BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy12803
         (902 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|170030914|ref|XP_001843332.1| colmedin [Culex quinquefasciatus]
 gi|167868812|gb|EDS32195.1| colmedin [Culex quinquefasciatus]
          Length = 794

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/831 (44%), Positives = 489/831 (58%), Gaps = 114/831 (13%)

Query: 56  PHVEFVPPDLYEEIREREKEQQNSTH-------NNPWVWLNAYSRIPLVAMQGFCNSTKE 108
           P+VEF  P L  E+ +++ E    T         + WVWL +YSRIP  A+ GFC +TKE
Sbjct: 11  PNVEFFNPKLRSELEKKDAEIIKKTGMKGAAPGGDTWVWLTSYSRIPFDAITGFCRATKE 70

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           YCPP               G  G+ G  G KG  G VG PGP G+ G EGK   RGPKG+
Sbjct: 71  YCPP---------------GSTGLPGIPGPKGNRGDVGLPGPAGVDGREGKPGPRGPKGE 115

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +GY                     PG  GLDGRDG+PGEPGLDGIPGR G DGIPG+D  
Sbjct: 116 IGY---------------------PGNPGLDGRDGVPGEPGLDGIPGRAGADGIPGRD-- 152

Query: 226 PGKDGIPGTNGTN---------------------GEKGMTGPRGNRGKSGINGVPGTPAI 264
            GKDG PG NG N                     G +G+ GPRG  G+SGING PGTP I
Sbjct: 153 -GKDGTPGINGQNGVDGKHGTPGPVGPSGPTGEPGPRGLHGPRGKPGRSGINGTPGTPGI 211

Query: 265 CAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSII 324
            A+K +      N    +LL+PPTI G+    +  PIVV EG ++RLRC ATG P+P + 
Sbjct: 212 NAWKIKVNDTFSN----ELLVPPTIAGAGTPEALRPIVVHEGTHLRLRCAATGTPRPHVE 267

Query: 325 WKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN---------------VP 369
           W+  + K I+ G+W+ S++A  TLN T+INR++MGAY CLADN                P
Sbjct: 268 WRREDGKTISNGAWQASSMAGHTLNITKINRVHMGAYQCLADNGIPPPANQTFNLEVHFP 327

Query: 370 PQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQ 429
           P I +RN+ V    G +AT ECEVEAFP +++YWE + G  +   G KY +   ++G Y+
Sbjct: 328 PLIRVRNQMVYATNGSSATFECEVEAFPEALKYWERVPGGRLLEPGDKYQMETHNEG-YK 386

Query: 430 YIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPVPTEKEQEEVTVYNRAP 489
            IM+LNI+N+  +DF  Y CI+KNE+ I +    L E +           E      + P
Sbjct: 387 SIMRLNITNIRYADFGEYHCIAKNELGITQAEFHLMEHSPYIIHRPGSLGEAQEYGKQPP 446

Query: 490 KPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFA-YDLLGRRDFDVKPLGNVSSKGLPNRT 548
           K E  +++C P   CP C D  ++F CK+   + YDL+G  + ++K  GNVS  GLPNRT
Sbjct: 447 KVESYEEICGPPTSCPECPDP-RDFKCKDNIVSLYDLVG--NLEIKQTGNVSYPGLPNRT 503

Query: 549 LDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSE-KFWMTTDSDPTH 607
            DC +YAVGKPV+HK T           D  +GAW+KD  P +   E K W T ++D + 
Sbjct: 504 TDCVLYAVGKPVYHKYT-----------DQNYGAWLKDSAPRNDAIEKKIWATRENDTSR 552

Query: 608 LNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSKIINI 667
           L E+ +K  ++++  + TY L +PF+GNAHVVFN SFYY+++ S  I+++DL + +   I
Sbjct: 553 LFEFANKTTYRNNVATKTYRLDKPFRGNAHVVFNGSFYYNERNSPRIIKYDLTTERQTAI 612

Query: 668 VNLSTVDPNIK--LYKTGYNVMDFSLDENGLWVIYGL-SNNNTAVTKLDTATLQIQYTWN 724
             +  V  N    LY T +N MDF++D+NGLWVIYG   +NNT + KL+   L +QY+WN
Sbjct: 613 KEIEGVTTNGSNYLYTTEFNYMDFNVDDNGLWVIYGTPESNNTIIAKLNEYNLDVQYSWN 672

Query: 725 ITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMIT 784
           I++ H KVG+MF+VCGVLY +DSVT+RNT IR ALDLY   LL+VSL FTNPF  TT + 
Sbjct: 673 ISVNHHKVGEMFIVCGVLYAIDSVTERNTKIRLALDLYHGKLLDVSLTFTNPFRKTTTVG 732

Query: 785 YNSRYKDLYTWDRGNSLTYPIRYHEIDSYNLNKQEKTD----ADMTTGVDI 831
           YN + K+LYTWDRGN LTYPIRYH +  +N+   +KT+      M TG DI
Sbjct: 733 YNPKNKELYTWDRGNQLTYPIRYH-VSDFNVTVTDKTEDSLNPQMQTGYDI 782


>gi|328713370|ref|XP_001950725.2| PREDICTED: hypothetical protein LOC100159502 [Acyrthosiphon pisum]
          Length = 838

 Score =  629 bits (1623), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 355/838 (42%), Positives = 502/838 (59%), Gaps = 86/838 (10%)

Query: 33  SNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHN---NPWVWLN 89
           S+R RR V+  +  +   +      VEF+ P+ +  I E+E   +    N     W WLN
Sbjct: 42  SHRPRRDVNIAENSVSSKTDDGGEKVEFINPN-FRPIIEKETNAKGEPPNGTKEEWYWLN 100

Query: 90  AYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG 149
           AYSRIP+ A+QGFC+ST++YCPPG +GPIG +GE+G  G  G KGE G+ G  G+ G  G
Sbjct: 101 AYSRIPVAALQGFCSSTRDYCPPGKEGPIGPRGELGPGGLPGSKGEPGQVGPMGIEGRKG 160

Query: 150 PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
           P G+PG  G +G +G  G+PG  G                     LDGRDG+PGEPGLDG
Sbjct: 161 PTGLPGPVGPKGERGMTGFPGAPG---------------------LDGRDGIPGEPGLDG 199

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---------------KGMTGPRGNRGKSG 254
           +PG+ G+DG PG +GLPGKD     NGT+G+               KG+TGP+G  GK G
Sbjct: 200 MPGKYGLDGFPGTNGLPGKDAT-CFNGTDGKPGEMGPFGPPGPIGPKGLTGPKGRPGKPG 258

Query: 255 INGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCV 314
           ++G PG P + AY   + + +P   TS  L  P+I+G   + +   I V+EGDN+RLRCV
Sbjct: 259 VDGTPGRPGLSAYNY-TVNGIP---TSDFLTAPSIIGQSELKN---ITVKEGDNLRLRCV 311

Query: 315 ATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------- 367
           ATG PKP+I+W+  +   + +GSW++ +V    +N T++NR++MG Y C+ADN       
Sbjct: 312 ATGSPKPTIVWQKLDTTTVPIGSWREESVTGHAINITKVNRLHMGRYKCIADNGIAPSAI 371

Query: 368 --------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYS 419
                    PP I ++N+ V   + R+ + ECEVEAFP ++ YWE     L   D  KYS
Sbjct: 372 QYYSIETHFPPLISVQNQHVAAAVNRSTSFECEVEAFPYAIHYWEREGDILDNSD--KYS 429

Query: 420 ISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILF--ESNAKTPVPTEK 477
           I+ +D  +Y++IMQLNIS+V  +D  TY C+SKN+  I  G++ L+  +    TP P   
Sbjct: 430 ITRIDVSNYKFIMQLNISSVVDTDNGTYYCVSKNDEAIVAGNITLYIVDPTLVTPPPYVD 489

Query: 478 EQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKPLG 537
              ++      P+  G+ D+C P V+CP C    +   CKE +   DLLG +   ++ L 
Sbjct: 490 PNNKIKFGTGPPELVGEYDICQPPVICPTCPKSKETKECKEEFTIDDLLGHQPLAIQQLH 549

Query: 538 NVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEKF 597
            V++KG  NR+LDCQVYAVGKPVF++ ++             FG+WMKDP     N E  
Sbjct: 550 KVTNKGHANRSLDCQVYAVGKPVFNRVSNAS-----------FGSWMKDPMSRESN-ETI 597

Query: 598 WMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQF 657
           WMTT+ +   L ++ +K MFK +  + TY L  PF GN+H ++ +SFY+H+K    I +F
Sbjct: 598 WMTTN-EINSLFQFSNKSMFKDNKPTKTYTLSYPFHGNSHAMYKDSFYFHEKDKPIIRRF 656

Query: 658 DLGSSKIINIVN---LSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSN-NNTAVTKLD 713
           D+   K  N +    L+T +   +LY T  N +D +++ENGLWVIYGL + NNTAV  +D
Sbjct: 657 DILQEKCTNFMTVPYLNTTNLKSRLYTTKMNYVDLAVEENGLWVIYGLEDSNNTAVLHVD 716

Query: 714 TATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLL-EVSLN 772
             TL+I+Y WNI++ H + GDMF+VCGVLY V SVT+R+T IRFALDLYKN  L +V L 
Sbjct: 717 PMTLEIEYAWNISVKHDRAGDMFIVCGVLYAVHSVTERSTTIRFALDLYKNVRLNDVDLP 776

Query: 773 FTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHEIDSYNLNKQEKTDADMTTGVD 830
           FTNPF +TT+I YN   K+L+TWD+GN LTYPIRY+ +   N+  +E  D  + +G++
Sbjct: 777 FTNPFAHTTLIQYNPHNKELFTWDQGNLLTYPIRYNSM-GLNITNKELDDEMIPSGIE 833


>gi|157109031|ref|XP_001650493.1| colmedin [Aedes aegypti]
 gi|108879145|gb|EAT43370.1| AAEL005189-PA, partial [Aedes aegypti]
          Length = 793

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 372/836 (44%), Positives = 489/836 (58%), Gaps = 122/836 (14%)

Query: 56  PHVEFVPPDLYEEIREREKEQQNSTHN-------NPWVWLNAYSRIPLVAMQGFCNSTKE 108
           P+VEF  P L  E+ +++ E    T         + WVWL +YSRIP  A+ GFC +TKE
Sbjct: 8   PNVEFFNPKLRTELEKKDAEIIRKTGQKGAAPGGDTWVWLTSYSRIPYDAITGFCRATKE 67

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           YCPPG  G  G  G  G +G++G+               PGP GI G EGK   RGPKG+
Sbjct: 68  YCPPGPPGLPGIPGPKGNRGDVGI---------------PGPAGIDGREGKPGPRGPKGE 112

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +GY                     PG  GLDGRDG+PGEPGLDG+PGR G DGIPG+D  
Sbjct: 113 IGY---------------------PGNPGLDGRDGVPGEPGLDGVPGRAGADGIPGRD-- 149

Query: 226 PGKDGIPGTNGTNGEKG---------------------MTGPRGNRGKSGINGVPGTPAI 264
            GKDG PG NG NG  G                     + GPRG  G+ GING PGTP I
Sbjct: 150 -GKDGTPGINGQNGIDGKNGTPGPMGPVGPPGEPGPRGLHGPRGKPGRPGINGTPGTPGI 208

Query: 265 CAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSII 324
            A+K +      N    +LL+PPTI GS    +  PIVV+EG ++RLRC ATG PKP + 
Sbjct: 209 NAWKIKVNDTFSN----ELLVPPTIAGSGTPEALRPIVVQEGTHLRLRCAATGTPKPHVE 264

Query: 325 WKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN---------------VP 369
           W+  + K I+ G+W+ S++A  TLN T+INR++MGAY CLADN                P
Sbjct: 265 WRREDGKTISNGAWQASSMAGHTLNITKINRVHMGAYQCLADNGIPPPANQTFNIEVQFP 324

Query: 370 PQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQ 429
           P I +RN+ V   +G TATLECEVEAFP +++YWE   G  +   G K+ +   + G Y+
Sbjct: 325 PLIRVRNQMVYTALGSTATLECEVEAFPEALKYWEREPGGRLLEPGDKFQMETHNDG-YK 383

Query: 430 YIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPVPTEKEQE----EVTVY 485
            IM+LNI+NV  +D   Y CI+KNE+ I +    L E+   TP  T  ++     +   Y
Sbjct: 384 SIMRLNITNVQPADIGAYHCIAKNELAITQAEFHLLEN---TPYNTMMQRPGGMGDTQEY 440

Query: 486 NR-APKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFA-YDLLGRRDFDVKPLGNVSSKG 543
            R  PK E  +D+C P   CP C D  ++  CK+   + YDL+G  + ++K  GNVS  G
Sbjct: 441 GRPPPKVESYEDICGPPTTCPECPDP-RDIKCKDAIVSLYDLVG--NLEIKQTGNVSYPG 497

Query: 544 LPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSE-KFWMTTD 602
           LPNRT DC +YAVGKPV+HK T           D  +GAW+KD  P +   E K W T D
Sbjct: 498 LPNRTTDCVLYAVGKPVYHKYT-----------DQNYGAWLKDAAPRNDAVEKKIWATRD 546

Query: 603 SDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSS 662
           +D   L E+ +K  ++++  + TY L +PF+GNAHVVFN SFYY+++ S  I+++DL   
Sbjct: 547 NDTMRLYEFANKTTYRNNVSTKTYRLDKPFRGNAHVVFNGSFYYNERNSPRIIKYDLNLE 606

Query: 663 KIINIVNLSTVDPNIK--LYKTGYNVMDFSLDENGLWVIYGL-SNNNTAVTKLDTATLQI 719
           +   +  +  V  N    LY T YN MDF++D+NGLWVIY    +NNT V KL+   L I
Sbjct: 607 RQTAVKEIEGVATNGSNFLYSTEYNYMDFNVDDNGLWVIYSTPDSNNTIVAKLNEFNLDI 666

Query: 720 QYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTN 779
            ++WNI++ H KVG+MF+VCGVLY +DSVT+RNT IR ALDLY + LL+VSL FTNPF  
Sbjct: 667 DFSWNISVNHHKVGEMFIVCGVLYAIDSVTERNTKIRLALDLYHSKLLDVSLTFTNPFRK 726

Query: 780 TTMITYNSRYKDLYTWDRGNSLTYPIRYHEIDSYNLNKQEKTD----ADMTTGVDI 831
           TT + YN + K+LYTWDRGN LTYPIRYH ++ YN    +K +      M TG +I
Sbjct: 727 TTTVGYNPKNKELYTWDRGNQLTYPIRYH-VNDYNTTVADKAEDALNPQMQTGYEI 781



 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 337/784 (42%), Positives = 441/784 (56%), Gaps = 141/784 (17%)

Query: 163 KGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +GD+G PGP GI G EGK   RGPKG++GYPG  GLDGRDG+PGEPGLDG+PGR G DGI
Sbjct: 86  RGDVGIPGPAGIDGREGKPGPRGPKGEIGYPGNPGLDGRDGVPGEPGLDGVPGRAGADGI 145

Query: 220 PGKDGLPGKDGIPGTNGTNGEKG---------------------MTGPRGNRGKSGINGV 258
           PG+DG   KDG PG NG NG  G                     + GPRG  G+ GING 
Sbjct: 146 PGRDG---KDGTPGINGQNGIDGKNGTPGPMGPVGPPGEPGPRGLHGPRGKPGRPGINGT 202

Query: 259 PGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGH 318
           PGTP I A+K +      N    +LL+PPTI GS    +  PIVV+EG ++RLRC ATG 
Sbjct: 203 PGTPGINAWKIKVNDTFSN----ELLVPPTIAGSGTPEALRPIVVQEGTHLRLRCAATGT 258

Query: 319 PKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----------- 367
           PKP + W+  + K I+ G+W+ S++A  TLN T+INR++MGAY CLADN           
Sbjct: 259 PKPHVEWRREDGKTISNGAWQASSMAGHTLNITKINRVHMGAYQCLADNGIPPPANQTFN 318

Query: 368 ----VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDV 423
                PP I +RN+ V   +G TATLECEVEAFP +++YWE   G  +   G K+ +   
Sbjct: 319 IEVQFPPLIRVRNQMVYTALGSTATLECEVEAFPEALKYWEREPGGRLLEPGDKFQMETH 378

Query: 424 DKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPVPTEKEQE--- 480
           + G Y+ IM+LNI+NV  +D   Y CI+KNE+ I +    L E+   TP  T  ++    
Sbjct: 379 NDG-YKSIMRLNITNVQPADIGAYHCIAKNELAITQAEFHLLEN---TPYNTMMQRPGGM 434

Query: 481 -EVTVYNRAP-KPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFA-YDLLGRRDFDVKPLG 537
            +   Y R P K E  +D+C P   CP C D  ++  CK+   + YDL+G  + ++K  G
Sbjct: 435 GDTQEYGRPPPKVESYEDICGPPTTCPECPDP-RDIKCKDAIVSLYDLVG--NLEIKQTG 491

Query: 538 NVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEK- 596
           NVS  GLPNRT DC +YAVGKPV+HK T           D  +GAW+KD  P +   EK 
Sbjct: 492 NVSYPGLPNRTTDCVLYAVGKPVYHKYT-----------DQNYGAWLKDAAPRNDAVEKK 540

Query: 597 FWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQ 656
            W T D+D   L E+ +K  ++++  + TY L +PF+GNAHVVFN SFYY+++ S  I++
Sbjct: 541 IWATRDNDTMRLYEFANKTTYRNNVSTKTYRLDKPFRGNAHVVFNGSFYYNERNSPRIIK 600

Query: 657 FDLGSSKIINIVNLSTVDPNIK--LYKTGYNVMDFSLDENGLWVIYGL-SNNNTAVTKLD 713
           +DL   +   +  +  V  N    LY T YN MDF++D+NGLWVIY    +NNT V KL+
Sbjct: 601 YDLNLERQTAVKEIEGVATNGSNFLYSTEYNYMDFNVDDNGLWVIYSTPDSNNTIVAKLN 660

Query: 714 TATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNF 773
              L I ++WNI++ H KVG+MF+VCGVLY +DSVT+RNT IR ALDLY + LL+VSL  
Sbjct: 661 EFNLDIDFSWNISVNHHKVGEMFIVCGVLYAIDSVTERNTKIRLALDLYHSKLLDVSLT- 719

Query: 774 TNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHEIDSYNLNKQEKTDADMTTGVDITP 833
              FTN                        P R      YN   +E              
Sbjct: 720 ---FTN------------------------PFRKTTTVGYNPKNKE-------------- 738

Query: 834 TQPPLIPDSTYSFIRLTFQDLYTWDRGNSLTYPIRYHEIDSYNLNKQEKTD----ADMTT 889
                               LYTWDRGN LTYPIRYH ++ YN    +K +      M T
Sbjct: 739 --------------------LYTWDRGNQLTYPIRYH-VNDYNTTVADKAEDALNPQMQT 777

Query: 890 GVDI 893
           G +I
Sbjct: 778 GYEI 781


>gi|158294873|ref|XP_315876.4| AGAP005849-PA [Anopheles gambiae str. PEST]
 gi|157015767|gb|EAA11951.4| AGAP005849-PA [Anopheles gambiae str. PEST]
          Length = 828

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 360/836 (43%), Positives = 489/836 (58%), Gaps = 80/836 (9%)

Query: 36  FRRHVDKDKGDIF---DNSVP--QTPHVEFVPPDLYEEIREREKEQQNSTH-------NN 83
           FR    + K D+    DN VP  + P+VEF  P L  E+ +++ +    T         +
Sbjct: 21  FREPSGRPKRDLSLFDDNLVPDQEGPNVEFFNPKLRSELEKKDADIMKKTGLKGAAPGGD 80

Query: 84  PWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAK---GEMGVKGERGEKG 140
            WVWL +YSRIP  A+ GFC +TKEYCPPG  G  G  G  G +   G  G  G  G +G
Sbjct: 81  SWVWLTSYSRIPFDAITGFCRATKEYCPPGPPGLPGIPGPKGNRGDPGLPGPPGVDGREG 140

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            PG  GP G  G PG+ G  G  G  G PG  G+PG               R G DG   
Sbjct: 141 KPGPRGPKGEIGYPGNPGLDGRDGVPGEPGLDGVPG---------------RAGADG--- 182

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +PG+ G DGIPG +G +GI GKDGL G  G  G  G  G +G+ GP+G +G+ G NG PG
Sbjct: 183 IPGKDGKDGIPGIDGRNGIDGKDGLAGPIGPAGPPGLPGPRGIHGPKGKQGRPGTNGTPG 242

Query: 261 TPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPK 320
           TP I A+K +      N    +LL+PP+I G+  + +  PI+V EG ++RLRC ATG P+
Sbjct: 243 TPGINAWKVKVNDTFSN----ELLVPPSIAGAGTVEALRPIIVHEGTHLRLRCAATGTPR 298

Query: 321 PSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------------- 367
           P + W+ ++ K I+ G+W+ +++A  TLN T+INR++MGAY CLADN             
Sbjct: 299 PHVEWRRADGKTISNGAWEATSMAGHTLNITKINRVHMGAYHCLADNGISPPANQTFNIE 358

Query: 368 --VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDK 425
              PP I +RN+      G T T  CE+EAFP +++YWE   G  +   G K+ +     
Sbjct: 359 VHFPPLIRVRNQMAYAVNGSTVTFVCEIEAFPEALKYWERFPGGRLLEPGDKFQMETHYD 418

Query: 426 GSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPVPTEKEQEEVTVY 485
           G Y+ +M+LNI+N+  SDF  Y C++KNE+ + +    L E +     P      ++ VY
Sbjct: 419 G-YKSVMRLNITNIRPSDFGEYHCVAKNELGMTEAEFHLMEHSPFIIRP--PGSTDINVY 475

Query: 486 -NRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFA-YDLLGRRDFDVKPLGNVSSKG 543
             + P+ E  +D+C P   CP C D  ++F CK+   + YDL+G  + ++KP+GNVS  G
Sbjct: 476 GTKPPEKESYEDICGPPTTCPECPDP-RDFKCKDTIVSLYDLVG--NLEIKPIGNVSFTG 532

Query: 544 LPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSE-KFWMTTD 602
           LPNRT DC +YAVGKPV+HK T             ++GAW+KDP   +   E K W T +
Sbjct: 533 LPNRTTDCVLYAVGKPVYHKYTEQ-----------LYGAWLKDPAARNDAMEKKVWATRE 581

Query: 603 SDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSS 662
           +D   L E+ +K  ++++  + TY L+ PF+GNAHVV+N SFYY+++ S  I+++DL   
Sbjct: 582 NDTHRLFEFANKTTYRNNVATKTYRLERPFRGNAHVVYNGSFYYNERNSPRIIKYDLNVE 641

Query: 663 KIINIVNLSTVDPNIK--LYKTGYNVMDFSLDENGLWVIYGL-SNNNTAVTKLDTATLQI 719
           +   +  L  V  N    LY T  N MDF++D+NGLWVIYG   +NNT V KL+   L +
Sbjct: 642 RQTAMNELEGVTTNGSNYLYTTEINYMDFNVDDNGLWVIYGTPDSNNTMVVKLNENNLTV 701

Query: 720 QYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTN 779
           QY WNI++ H KVG+MF+VCGVLY +DSVT+RNT IR ALDLY + LL+VSL FTNPF  
Sbjct: 702 QYGWNISVNHHKVGEMFIVCGVLYAIDSVTERNTKIRLALDLYHSKLLDVSLAFTNPFRK 761

Query: 780 TTMITYNSRYKDLYTWDRGNSLTYPIRYHEIDSYNLNKQEKTD----ADMTTGVDI 831
           TT + YN + K+LYTWDRGN LTYPIRYHEI  YN    EK D      M TG DI
Sbjct: 762 TTTVGYNFKNKELYTWDRGNQLTYPIRYHEI-GYNTTATEKADDGLNPQMQTGYDI 816



 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 314/761 (41%), Positives = 425/761 (55%), Gaps = 127/761 (16%)

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G RGPKG++GYPG  GLDGRDG+PGEPGLDG+PGR G DGIPGKDG  G  GI G N
Sbjct: 140 GKPGPRGPKGEIGYPGNPGLDGRDGVPGEPGLDGVPGRAGADGIPGKDGKDGIPGIDGRN 199

Query: 236 GTNGEKGMT------------------GPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G +G+ G+                   GP+G +G+ G NG PGTP I A+K +      N
Sbjct: 200 GIDGKDGLAGPIGPAGPPGLPGPRGIHGPKGKQGRPGTNGTPGTPGINAWKVKVNDTFSN 259

Query: 278 SETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGS 337
               +LL+PP+I G+  + +  PI+V EG ++RLRC ATG P+P + W+ ++ K I+ G+
Sbjct: 260 ----ELLVPPSIAGAGTVEALRPIIVHEGTHLRLRCAATGTPRPHVEWRRADGKTISNGA 315

Query: 338 WKDSAVASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVP 382
           W+ +++A  TLN T+INR++MGAY CLADN                PP I +RN+     
Sbjct: 316 WEATSMAGHTLNITKINRVHMGAYHCLADNGISPPANQTFNIEVHFPPLIRVRNQMAYAV 375

Query: 383 IGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNIS 442
            G T T  CE+EAFP +++YWE   G  +   G K+ +     G Y+ +M+LNI+N+  S
Sbjct: 376 NGSTVTFVCEIEAFPEALKYWERFPGGRLLEPGDKFQMETHYDG-YKSVMRLNITNIRPS 434

Query: 443 DFDTYRCISKNEVDIAKGSLILFESNAKTPVPTEKEQEEVTVY-NRAPKPEGQDDLCPPQ 501
           DF  Y C++KNE+ + +    L E +     P      ++ VY  + P+ E  +D+C P 
Sbjct: 435 DFGEYHCVAKNELGMTEAEFHLMEHSPFIIRP--PGSTDINVYGTKPPEKESYEDICGPP 492

Query: 502 VLCPPCSDQNKEFNCKEGYFA-YDLLGRRDFDVKPLGNVSSKGLPNRTLDCQVYAVGKPV 560
             CP C D  ++F CK+   + YDL+G  + ++KP+GNVS  GLPNRT DC +YAVGKPV
Sbjct: 493 TTCPECPDP-RDFKCKDTIVSLYDLVG--NLEIKPIGNVSFTGLPNRTTDCVLYAVGKPV 549

Query: 561 FHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEK-FWMTTDSDPTHLNEYKDKDMFKS 619
           +HK T             ++GAW+KDP   +   EK  W T ++D   L E+ +K  +++
Sbjct: 550 YHKYTEQ-----------LYGAWLKDPAARNDAMEKKVWATRENDTHRLFEFANKTTYRN 598

Query: 620 DAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIK- 678
           +  + TY L+ PF+GNAHVV+N SFYY+++ S  I+++DL   +   +  L  V  N   
Sbjct: 599 NVATKTYRLERPFRGNAHVVYNGSFYYNERNSPRIIKYDLNVERQTAMNELEGVTTNGSN 658

Query: 679 -LYKTGYNVMDFSLDENGLWVIYGL-SNNNTAVTKLDTATLQIQYTWNITLLHKKVGDMF 736
            LY T  N MDF++D+NGLWVIYG   +NNT V KL+   L +QY WNI++ H KVG+MF
Sbjct: 659 YLYTTEINYMDFNVDDNGLWVIYGTPDSNNTMVVKLNENNLTVQYGWNISVNHHKVGEMF 718

Query: 737 VVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWD 796
           +VCGVLY +DSVT+RNT IR ALDLY + LL+VSL F                       
Sbjct: 719 IVCGVLYAIDSVTERNTKIRLALDLYHSKLLDVSLAF----------------------- 755

Query: 797 RGNSLTYPIRYHEIDSYNLNKQEKTDADMTTGVDITPTQPPLIPDSTYSFIRLTFQDLYT 856
                T P R      YN   +E                                  LYT
Sbjct: 756 -----TNPFRKTTTVGYNFKNKE----------------------------------LYT 776

Query: 857 WDRGNSLTYPIRYHEIDSYNLNKQEKTD----ADMTTGVDI 893
           WDRGN LTYPIRYHEI  YN    EK D      M TG DI
Sbjct: 777 WDRGNQLTYPIRYHEI-GYNTTATEKADDGLNPQMQTGYDI 816


>gi|91085657|ref|XP_971289.1| PREDICTED: similar to colmedin [Tribolium castaneum]
          Length = 879

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 356/850 (41%), Positives = 485/850 (57%), Gaps = 101/850 (11%)

Query: 26  IISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHN--- 82
           I+ +H    R RR  D  +     NS    PHVEF  P++   + ++++  +  T N   
Sbjct: 85  ILQEHQKGTRRRRDADDYQ---MLNSPSDEPHVEFFSPEMRSTLEKKDELIRQQTGNKGA 141

Query: 83  ----NPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE 138
               + W+WL +YSRIP  A++G+C    ++C      P G+ G  G  G  G KG+RG+
Sbjct: 142 APGGDSWIWLTSYSRIPEKALEGYCKKVHQFC------PPGRPGPTGPPGSQGPKGDRGD 195

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
           KG PGV G  G +G+PG  G++G +G  G  G  GIPG+                   G 
Sbjct: 196 KGFPGVPGQMGHRGLPGLPGEKGSQGRPGLDGRDGIPGEP------------------GL 237

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGK 252
           DG+PG  G DGIPG NG  G+PG+DG  G D      G  G  G  G KG+TGP+G  G+
Sbjct: 238 DGMPGRNGYDGIPGVNGRPGLPGRDGRNGTDGLPGLPGPQGPPGPPGPKGLTGPKGKPGR 297

Query: 253 SGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLR 312
            G +G PG P    Y+      +     S+LLIPP+I G++      PIVV EG+NVRL 
Sbjct: 298 HGRDGDPGKPGGTFYQ------INGKNVSELLIPPSIAGAQAT-PMGPIVVHEGENVRLH 350

Query: 313 CVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----- 367
           C A G P P + W     +P++ G+W D+ V+  TLN TR+NR++MG Y C+ADN     
Sbjct: 351 CSAIGTPNPHVTWMKLGKRPVSRGAWHDTGVSGHTLNITRVNRVHMGQYKCIADNGIPPQ 410

Query: 368 ----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVK 417
                      PP I I N+ V VP G +A LECE EAFP S+RYWE  DG L+E +G K
Sbjct: 411 ASQTFNLEVYFPPLIRIYNQVVEVPTGSSAVLECETEAFPESIRYWERSDGRLLE-NGNK 469

Query: 418 YSISD-VDKGSYQYIMQLNISNVNISDFD-TYRCISKNEVDIAKGSLILFESNAKTPVPT 475
           Y I + +D+  Y+  MQLNI+ V+ +D    Y C+SKNE+   +G L + E     P   
Sbjct: 470 YQIDNSLDRDLYKARMQLNITRVHSNDMTYKYYCVSKNELKTIRGELQIQEQQPGRPRQQ 529

Query: 476 EKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKP 535
             +++     N  P    ++DLC P V CP C     E     G    DL+ R  ++++ 
Sbjct: 530 LNDKKTSIFGNLPPIQVSEEDLCGPPVQCPEC-----EACSASGVSLIDLISR--WNIRK 582

Query: 536 LGNVS-SKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHP-TSGN 593
            GN+   K   NRT +C +YAVGKPV+H+ +               G WM+D +P    +
Sbjct: 583 FGNIMYDKDYANRTTNCVLYAVGKPVYHRYSDHNN-----------GCWMRDSNPLVEKD 631

Query: 594 SEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNS 653
           +EKFW+T + DP+HL ++ +K MF+ +A S TY L  PFQGNAHV++N SFYY+ K SN 
Sbjct: 632 AEKFWVTQEDDPSHLFQFDNKTMFRRNAPSRTYVLSYPFQGNAHVIYNGSFYYNAKASNK 691

Query: 654 IVQFDLGSSKIINIVNLSTVDP----NIKLYKTGYNVMDFSLDENGLWVIYGL-SNNNTA 708
           I++F+L +S   +  NLS   P    +  LY   YN MDFS+D+NGLWVI+ +  +NNTA
Sbjct: 692 IIKFNLQTS---HSDNLSLPFPYPLNSSNLYTAQYNYMDFSVDDNGLWVIFPVPDSNNTA 748

Query: 709 VTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLE 768
           V K+D   ++I Y WN+++ H KVG+MF+VCGVLY VDSVTDRNT IRFALDLY   LL+
Sbjct: 749 VLKMDVNLMKINYIWNVSINHNKVGEMFIVCGVLYAVDSVTDRNTKIRFALDLYNEKLLD 808

Query: 769 VSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHEIDSYNLNKQ-------EKT 821
           V+L F+NPF  TTMI YN R K+LYTWD+GN LTYP+RYHE   YN+  +       E  
Sbjct: 809 VNLAFSNPFRKTTMIGYNHRNKELYTWDKGNQLTYPVRYHE-SGYNMTDRDDKIFASEFA 867

Query: 822 DADMTTGVDI 831
             DM TG ++
Sbjct: 868 QRDMPTGYNV 877


>gi|321464115|gb|EFX75125.1| hypothetical protein DAPPUDRAFT_323635 [Daphnia pulex]
          Length = 949

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 336/822 (40%), Positives = 464/822 (56%), Gaps = 134/822 (16%)

Query: 56  PHVEFVPPDLYEEIREREKEQQN-STHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGL 114
           P+VEFV P   +E   R     + +   NPWVWLNAYSRIP+ A+Q FC++TK+YCPPGL
Sbjct: 161 PNVEFVNPKFRDEYLSRSDSGSSPNNQENPWVWLNAYSRIPVNAIQDFCSATKDYCPPGL 220

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           +GPIG +G +G KG  G +GERG++G  G+ GP GP    G +G +GPKGDM   G  G+
Sbjct: 221 EGPIGPQGIVGEKGVRGERGERGQQGEAGLRGPVGPI---GPQGPKGPKGDM---GKTGL 274

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGK--- 228
           P                  GL+GRDG+PGEPGLDG+PGR+   G DGI G DGLPG+   
Sbjct: 275 P------------------GLNGRDGVPGEPGLDGVPGRSGTPGFDGISGMDGLPGQAGH 316

Query: 229 ---DGIPGTNGTNGE------KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
              DG PGT G  G+      +G+TGPRG  G+SGI GVPG P +  +   S        
Sbjct: 317 NGIDGNPGTPGEKGDSGPIGPQGLTGPRGKPGRSGIPGVPGIPGVNTWVVNST-----DP 371

Query: 280 TSQLLIPPTIVGSEHI------FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPI 333
              +L+PP+I+G E I       ++  +V++EG N+RLRC   G+P+P + W  ++    
Sbjct: 372 RRIVLVPPSILGVEIIDGQLQGNTTRTVVIQEGKNLRLRCGTAGNPRPEVSWMRADGSLT 431

Query: 334 TLGSWKDSAVASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRR 378
            +GSW+ S V   T N T+++R +MG Y+C+ADN                PP I   +  
Sbjct: 432 PMGSWQTSDVLGPTFNITQVHRDHMGVYVCVADNGIPPPSYRTINVEVHFPPLIRTESSS 491

Query: 379 VGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLN--I 436
           +GV  G +  LEC VEAFP S+ YWE  DG  I+     +     D G Y+  M LN  I
Sbjct: 492 IGVANGSSVVLECVVEAFPESLCYWERADGRSIDS---MHKAFLRDHGKYKVHMTLNLTI 548

Query: 437 SNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPVPTEKEQEEVTVYNRAPKPEGQDD 496
           +N N+ D+  Y C+SKNEV I +G                    E+ VY   P+      
Sbjct: 549 TNPNV-DYGRYHCVSKNEVGITRG--------------------EIDVYAIDPRFTQAGG 587

Query: 497 LCPPQVLCPPCSD------------------QNKEFNCKE-GYFAYDLLGRRDFDVKPLG 537
           +  P++   P SD                        C+E G   +D+LGR   D++PLG
Sbjct: 588 VNDPKLWGTPPSDLVDLEDMCPPPPDCPKCSSVPSEKCRESGLGMFDVLGR--LDIRPLG 645

Query: 538 NVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHP-TSGNSEK 596
           N +  G  NRT DC + A+GKPV+H+ T+              G WM+D  P T+ + +K
Sbjct: 646 NETYPGYVNRTQDCVLVAIGKPVYHRFTNTSH-----------GNWMRDSLPRTTFDGDK 694

Query: 597 FWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQ 656
           +W T  ++   L EY +K  FK D     Y L    +G  HVV+N S YYH++  + +++
Sbjct: 695 YWATKYNETYVLYEYANKTTFKKDISIRNYTLPFALKGYLHVVYNGSLYYHQQEESRVIR 754

Query: 657 FDLGSSK--IINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSN-----NNTAV 709
           ++L S +  ++ + N +TV  N+ LY    + +DFS+DE GLWVIYG SN     NNTAV
Sbjct: 755 YELASERNTMVYLPN-ATVTGNVHLYAHSQSYLDFSVDETGLWVIYGASNGEQPTNNTAV 813

Query: 710 TKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEV 769
            KL++ +L+I+Y WNI+L +++ G+MF+ CGVLY VDSVT+R T IRFALDLY+N LLEV
Sbjct: 814 AKLNSYSLEIEYIWNISLNNQRAGEMFIACGVLYAVDSVTERTTKIRFALDLYRNKLLEV 873

Query: 770 -SLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHEI 810
             L FTNPF  T+M+ YN R K+LYTWD GN LTYP+++ +I
Sbjct: 874 DGLTFTNPFRKTSMVGYNHRNKELYTWDNGNQLTYPVKFTDI 915


>gi|194768126|ref|XP_001966164.1| GF19364 [Drosophila ananassae]
 gi|190623049|gb|EDV38573.1| GF19364 [Drosophila ananassae]
          Length = 960

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 331/846 (39%), Positives = 470/846 (55%), Gaps = 99/846 (11%)

Query: 9   RSRIPTLNCQAYTLDKPIISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYE- 67
           RS  P  N + +T +    +      R RR V   +     +S+   P +EF  P+  + 
Sbjct: 161 RSYDPLKNERKFTDNLISHTPRPTGKRMRRDVTSSEPT---SSMHADPVIEFFNPNHRKV 217

Query: 68  ------EIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQK 121
                 EIR+R  ++  +   + W++LN Y R+P   + GFC  T++YCPP  QGP+G+ 
Sbjct: 218 LEEQDTEIRKRTGQKGAAPGGDEWIYLNTYCRVPEKIITGFCKGTQDYCPPAPQGPVGEA 277

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  G  G  G+ G  G KG  G VG PG  G+ G          +G+ GP       G R
Sbjct: 278 GPKGPTGNPGLPGIPGPKGNRGDVGLPGAPGVDG----------VGHQGP------AGPR 321

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---IPG---KDGLPGKDGIPGTN 235
           G KGD G  GR GLDGRDG+PGEPGLDG+PGR G DG   +PG   KDGL GKDG  G +
Sbjct: 322 GQKGDAGAVGRAGLDGRDGVPGEPGLDGVPGRAGADGKNGLPGRDGKDGLHGKDGKDGLS 381

Query: 236 -----------GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN-SETSQL 283
                      G  G KG+ GPRG  GK G NG PG P I A+K +     PN S ++ L
Sbjct: 382 ITGPKGAQGPPGERGLKGIAGPRGRPGKPGTNGTPGVPGINAWKMQ----FPNGSSSNDL 437

Query: 284 LIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV 343
           LIPP+I    +      I+V EG ++ L C ATG+P P + W+  + + I +   + +++
Sbjct: 438 LIPPSITDLHNPEFHRTIIVEEGRSLNLSCSATGNPAPQVEWRREDGRTINVNGMEMASI 497

Query: 344 ASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTAT 388
           +   L F  I R  M AY C A+N                 P I +  + +      +AT
Sbjct: 498 SGQYLKFINITRHQMAAYTCYANNGIAPVANATFIVEVHFAPMISVYRQTIYAEYQSSAT 557

Query: 389 LECEVEAFPLSVRYWE-FIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447
           LEC+VEAFP ++RYWE   DG +++    KY I     G+++  M+L IS++   DF  Y
Sbjct: 558 LECQVEAFPEAIRYWERAYDGKILDPSD-KYGIESYPDGNFKTSMRLTISSLRKDDFGYY 616

Query: 448 RCISKNEVDIAKGSLILFESNAKTP-VPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPP 506
            C+++NE++    +++ FE   + P   T      + VY + P PE +   CP   +C  
Sbjct: 617 HCVARNELN---ATMVNFEVAPQDPNSETPYVGNSIKVYGQRP-PESE---CP---VCDQ 666

Query: 507 CSDQNKEFNCKEGYFAYDLLGRRDFDVKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTS 566
           C D +  + CK+           +F+++  GN+S  GLP R   C +YAVGKPVFHK  +
Sbjct: 667 CPDPSL-YQCKDSIL-------NNFEIQATGNLSYPGLPKRQKTCYLYAVGKPVFHKVVN 718

Query: 567 MKKESSGKPVDVIFGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDA-KSWT 625
            K           FG+W++DP P S + EK ++T ++DP +L E+  +  ++ ++     
Sbjct: 719 EK-----------FGSWLRDPAPES-DREKTFVTNENDPYNLFEFTTRIQYRMNSVPRRK 766

Query: 626 YNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGS-SKIINIVNLSTVDPNIKLYKTGY 684
           Y + E F GNAHVVFNNSFYYH++ S+ +V+ DL S  KI   +  + V    +LY T Y
Sbjct: 767 YEIPEGFYGNAHVVFNNSFYYHQRNSDLVVKLDLTSLKKITTQLPYAGVASANRLYTTDY 826

Query: 685 NVMDFSLDENGLWVIYGLSN-NNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLY 743
           N MDF++DE GLWVIY   N NNT V KLD+ TL++QY +NITL H + G+MF+VCG LY
Sbjct: 827 NYMDFNVDEVGLWVIYSTYNSNNTLVAKLDSETLKMQYNFNITLDHHQFGEMFIVCGNLY 886

Query: 744 VVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTY 803
            +DS TD+NT IR+ +DLYK  LL  +L F+NPF++TT + YN    +LY+WD+GN+LTY
Sbjct: 887 AIDSGTDKNTQIRYVVDLYKGKLLNTNLPFSNPFSHTTTVGYNPLTVELYSWDKGNALTY 946

Query: 804 PIRYHE 809
           PIRY+E
Sbjct: 947 PIRYNE 952


>gi|198468827|ref|XP_001354827.2| GA19916 [Drosophila pseudoobscura pseudoobscura]
 gi|198146589|gb|EAL31882.2| GA19916 [Drosophila pseudoobscura pseudoobscura]
          Length = 956

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 329/822 (40%), Positives = 457/822 (55%), Gaps = 102/822 (12%)

Query: 35  RFRRHVDKDKGDIFDNSVPQTPHVEFVPPD----LYE---EIREREKEQQNSTHNNPWVW 87
           R R  V +D       S+   P +EF  P+    L E   EIR+R  ++  +   + W++
Sbjct: 182 RMRMRVRRDIASS-PASMHADPLIEFFNPNHRMALEEQDSEIRKRTGQKGAAPGGDEWIY 240

Query: 88  LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
           LN Y R+P   + GFC  T++YCPP    P+G  GE G KG                 G 
Sbjct: 241 LNTYCRVPEKIITGFCKGTQDYCPPA---PVGPPGESGPKGP---------------TGN 282

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGI--PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           PG  GIPG +G RG  G  G PG  G+   G  G RGPKGD G  GR GLDGRDG+PGEP
Sbjct: 283 PGLPGIPGPKGNRGDVGLPGAPGVDGVGHVGPAGPRGPKGDAGGVGRSGLDGRDGVPGEP 342

Query: 206 GLDGIPGRNGMDGI------PGKDGLPGKDGIPGTN-----------GTNGEKGMTGPRG 248
           GLDG+PGR G DG        GKDGL GKDG  G +           G  G KG+ GPRG
Sbjct: 343 GLDGVPGRAGADGKNGQPGRDGKDGLHGKDGKDGLSITGPKGAQGPPGERGLKGIAGPRG 402

Query: 249 NRGKSGINGVPGTPAICAYKRESCSLLPN-SETSQLLIPPTIVGSEHIFSSSPIVVREGD 307
             GK G NG PG P I A+K +     PN S ++ LLIPP+I           ++V EG 
Sbjct: 403 RPGKPGTNGTPGVPGINAWKMQ----FPNGSSSNDLLIPPSITDLHAPDFHRTVIVEEGR 458

Query: 308 NVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367
           ++ L C ATG P+P + W+  + + I +   + ++++   L FT I R  M AY C A+N
Sbjct: 459 SLNLSCTATGSPQPQVEWRREDGRTINVNGMEMASISGQFLKFTNITRHQMAAYTCYANN 518

Query: 368 ---------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWE-FIDGTLI 411
                            P I +  + +      +ATLEC VEAFP ++RYWE   DG ++
Sbjct: 519 GIAPVANATFIVEVHFAPMISVYRQMIYAEYQSSATLECLVEAFPEAIRYWERAYDGKIL 578

Query: 412 EHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471
           +    KYSI     G ++  M+L I+N+   DF  Y C+++NE++    +++ FE   + 
Sbjct: 579 D-PSEKYSIESYPDG-FKTSMRLTINNLRKDDFGYYHCVARNELN---ATMVNFEIAPQD 633

Query: 472 P-VPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRD 530
           P   T      + VY + P PE +   CP   +C  C D +  + CK+           +
Sbjct: 634 PNSETPYVGNSIKVYGQRP-PESE---CP---VCDQCPDPSL-YQCKDSIL-------NN 678

Query: 531 FDVKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPT 590
           F+++P GN+S  GLP R   C +YAVGKPVFHK  + K           FG+W++DP P 
Sbjct: 679 FEIQPTGNLSYPGLPKRPKTCYLYAVGKPVFHKVVNEK-----------FGSWLRDPAPD 727

Query: 591 SGNSEKFWMTTDSDPTHLNEYKDKDMFKSDA-KSWTYNLKEPFQGNAHVVFNNSFYYHKK 649
           S + EK ++T ++DP +L E+  +  ++ ++     Y + E F GNAHVVFN SFYYH++
Sbjct: 728 S-DREKTFVTNENDPYNLFEFTTRIQYRMNSVPRRKYEIPEGFHGNAHVVFNGSFYYHQR 786

Query: 650 FSNSIVQFDLGS-SKIINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSN-NNT 707
            S+ +V+ DL S  KI   +  + V  + +LY T +N MDF++DE GLWVIY   N NNT
Sbjct: 787 NSDLVVKLDLISLKKITTQLPYAGVAASNRLYATDFNFMDFNVDEVGLWVIYSTYNSNNT 846

Query: 708 AVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLL 767
            V KLD  TL++QY +NITL H + G+MF+VCG LY +DS TD+NT IR+ +DLYK  LL
Sbjct: 847 LVAKLDAETLKMQYNFNITLDHHQFGEMFIVCGNLYAIDSATDKNTQIRYVVDLYKGKLL 906

Query: 768 EVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
             +L F+NPF++TT + YN    +LY+WD+GN+LTYPIRY+E
Sbjct: 907 NTNLPFSNPFSHTTTVGYNPLTVELYSWDKGNALTYPIRYNE 948


>gi|195166846|ref|XP_002024245.1| GL14936 [Drosophila persimilis]
 gi|194107618|gb|EDW29661.1| GL14936 [Drosophila persimilis]
          Length = 962

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 329/822 (40%), Positives = 457/822 (55%), Gaps = 102/822 (12%)

Query: 35  RFRRHVDKDKGDIFDNSVPQTPHVEFVPPD----LYE---EIREREKEQQNSTHNNPWVW 87
           R R  V +D       S+   P +EF  P+    L E   EIR+R  ++  +   + W++
Sbjct: 188 RMRMRVRRDIASS-PASMHADPLIEFFNPNHRMALEEQDSEIRKRTGQKGAAPGGDEWIY 246

Query: 88  LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
           LN Y R+P   + GFC  T++YCPP    P+G  GE G KG                 G 
Sbjct: 247 LNTYCRVPEKIITGFCKGTQDYCPPA---PVGPPGESGPKGP---------------TGN 288

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIP--GDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           PG  GIPG +G RG  G  G PG  G+   G  G RGPKGD G  GR GLDGRDG+PGEP
Sbjct: 289 PGLPGIPGPKGNRGDVGLPGAPGVDGVGHLGPAGPRGPKGDAGGVGRSGLDGRDGVPGEP 348

Query: 206 GLDGIPGRNGMDGI------PGKDGLPGKDGIPGTN-----------GTNGEKGMTGPRG 248
           GLDG+PGR G DG        GKDGL GKDG  G +           G  G KG+ GPRG
Sbjct: 349 GLDGVPGRAGADGKNGQPGRDGKDGLNGKDGKDGLSITGPKGAQGPPGERGLKGIAGPRG 408

Query: 249 NRGKSGINGVPGTPAICAYKRESCSLLPN-SETSQLLIPPTIVGSEHIFSSSPIVVREGD 307
             GK G NG PG P I A+K +     PN S ++ LLIPP+I           ++V EG 
Sbjct: 409 RPGKPGTNGTPGVPGINAWKMQ----FPNGSSSNDLLIPPSITDLHAPDFHRTVIVEEGR 464

Query: 308 NVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367
           ++ L C ATG P+P + W+  + + I +   + ++++   L FT I R  M AY C A+N
Sbjct: 465 SLNLSCTATGSPQPQVEWRREDGRTINVNGMEMASISGQFLKFTNITRHQMAAYTCYANN 524

Query: 368 ---------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWE-FIDGTLI 411
                            P I +  + +      +ATLEC VEAFP ++RYWE   DG ++
Sbjct: 525 GIAPVANATFIVEVHFAPMISVYRQMIYAEYQSSATLECLVEAFPEAIRYWERAYDGKIL 584

Query: 412 EHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471
           +    KYSI     G ++  M+L I+N+   DF  Y C+++NE++    +++ FE   + 
Sbjct: 585 D-PSEKYSIESYPDG-FKTSMRLTINNMRKDDFGYYHCVARNELN---ATMVNFEIAPQD 639

Query: 472 P-VPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRD 530
           P   T      + VY + P PE +   CP   +C  C D +  + CK+           +
Sbjct: 640 PNSETPYVGNSIKVYGQRP-PESE---CP---VCDQCPDPSL-YQCKDSIL-------NN 684

Query: 531 FDVKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPT 590
           F+++P GN+S  GLP R   C +YAVGKPVFHK  + K           FG+W++DP P 
Sbjct: 685 FEIQPTGNLSYPGLPKRPKTCYLYAVGKPVFHKVVNEK-----------FGSWLRDPAPD 733

Query: 591 SGNSEKFWMTTDSDPTHLNEYKDKDMFKSDA-KSWTYNLKEPFQGNAHVVFNNSFYYHKK 649
           S + EK ++T ++DP +L E+  +  ++ ++     Y + E F GNAHVVFN SFYYH++
Sbjct: 734 S-DREKTFVTNENDPYNLFEFTTRIQYRMNSVPRRKYEIPEGFHGNAHVVFNGSFYYHQR 792

Query: 650 FSNSIVQFDLGS-SKIINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSN-NNT 707
            S+ +V+ DL S  KI   +  + V  + +LY T +N MDF++DE GLWVIY   N NNT
Sbjct: 793 NSDLVVKLDLISLKKITTQLPYAGVAASNRLYATDFNFMDFNVDEVGLWVIYSTYNSNNT 852

Query: 708 AVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLL 767
            V KLD  TL++QY +NITL H + G+MF+VCG LY +DS TD+NT IR+ +DLYK  LL
Sbjct: 853 LVAKLDAETLKMQYNFNITLDHHQFGEMFIVCGNLYAIDSATDKNTQIRYVVDLYKGKLL 912

Query: 768 EVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
             +L F+NPF++TT + YN    +LY+WD+GN+LTYPIRY+E
Sbjct: 913 NTNLPFSNPFSHTTTVGYNPLTVELYSWDKGNALTYPIRYNE 954


>gi|195457114|ref|XP_002075432.1| GK15168 [Drosophila willistoni]
 gi|194171517|gb|EDW86418.1| GK15168 [Drosophila willistoni]
          Length = 977

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 319/820 (38%), Positives = 457/820 (55%), Gaps = 101/820 (12%)

Query: 35  RFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYE-------EIREREKEQQNSTHNNPWVW 87
           R RR V          S+   P +EF  P+  +       EIR+R   +  +   + W++
Sbjct: 206 RMRRDVTSPTA-----SMHADPLIEFFNPNHRKVLDEQDAEIRKRTGLKGAAPGGDEWIY 260

Query: 88  LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
           LN Y R+P   + GFC  T++YCPP  QGP         +G++G KG  G  G PG+   
Sbjct: 261 LNTYCRVPEQIITGFCKGTQDYCPPAPQGP---------QGDIGPKGPTGNPGLPGI--- 308

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PGP+G  GD G  G  G  G     G+ G  G RGPKGD G  GR GLDGRDG+PGEPGL
Sbjct: 309 PGPKGNRGDVGLPGAPGVDGI----GVQGPAGPRGPKGDAGGVGRAGLDGRDGVPGEPGL 364

Query: 208 DGIPGR------NGMDGIPGKDGLPGKDGIPGTN-----------GTNGEKGMTGPRGNR 250
           DG+PGR      NG+ G  GKDGL GKDG  G +           G  G KG+ GPRG  
Sbjct: 365 DGVPGRAGADGKNGLAGRDGKDGLHGKDGKDGMSITGPKGAQGPPGERGLKGIAGPRGRP 424

Query: 251 GKSGINGVPGTPAICAYKRESCSLLPN-SETSQLLIPPTIVGSEHIFSSSPIVVREGDNV 309
           GK G NG PG P I A+K +     PN S ++ LLIPP+I       +   ++V EG  +
Sbjct: 425 GKPGTNGTPGIPGINAWKMQ----YPNGSASNDLLIPPSITDLRSPDAQRSVIVEEGRTL 480

Query: 310 RLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN-- 367
            L C ATG+P P + W+  + + I +   + ++++   L FT I R  M AY C A+N  
Sbjct: 481 NLSCSATGNPVPKVEWRRDDGRTINVNGMEMASISGQFLKFTNITRHQMAAYTCFANNGI 540

Query: 368 -------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWE-FIDGTLIEH 413
                          P I +  + +      +ATLEC+VEAFP ++RYWE   DG +++ 
Sbjct: 541 APVANATFLVEVHFAPMISVYRQMIYAEYQSSATLECQVEAFPEAIRYWERAYDGKILDP 600

Query: 414 DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP- 472
              KY I     G ++  M+L I+N+   DF  Y C+++NE++    +++ FE   + P 
Sbjct: 601 SD-KYRIESYPDG-FKTSMRLTINNLRKDDFGYYHCVARNELN---ATMVNFEIAPQDPN 655

Query: 473 VPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFD 532
             T      + VY + P PE +   CP   +C  C D +  + CK+           +F+
Sbjct: 656 SETPYVGNNIKVYGQRP-PESE---CP---VCDQCPDPSL-YQCKDSIL-------NNFE 700

Query: 533 VKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSG 592
           ++P GN+S  GLP R   C +YAVGKPVFHK  + K           FG+W++D  P+  
Sbjct: 701 IQPTGNLSYPGLPKRPKTCYLYAVGKPVFHKVVNEK-----------FGSWLRDAAPSDK 749

Query: 593 NSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSW-TYNLKEPFQGNAHVVFNNSFYYHKKFS 651
           + +K ++T ++DP +L E+  +  ++ ++     Y + E F GNAH VFN SFYY +K +
Sbjct: 750 DRDKTFVTNENDPYNLFEFTTRQQYRMNSVPMHKYKIPEGFHGNAHAVFNGSFYYQQKNT 809

Query: 652 NSIVQFDLGSS-KIINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYG-LSNNNTAV 709
           + +V+ DL ++ KI   +  + +  + +LYKT +N MDF++DE GLWVIY    +NNT V
Sbjct: 810 DLVVKLDLFTNEKITTQLPYAGIAASNRLYKTDFNYMDFNVDEVGLWVIYSTYDSNNTMV 869

Query: 710 TKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEV 769
            KLD  TL++QY +NITL H + G+MF+VCG LY +DS TD+NT IR+ +DLYK  LL  
Sbjct: 870 AKLDAKTLKMQYNFNITLDHHQFGEMFIVCGNLYAIDSGTDKNTQIRYVVDLYKGKLLNT 929

Query: 770 SLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
           +L F+NPF++TT + YN    +LY+WD+GN+LTYPIRY+E
Sbjct: 930 NLPFSNPFSHTTTVGYNPLTVELYSWDKGNALTYPIRYNE 969


>gi|195132033|ref|XP_002010448.1| GI14677 [Drosophila mojavensis]
 gi|193908898|gb|EDW07765.1| GI14677 [Drosophila mojavensis]
          Length = 977

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 322/841 (38%), Positives = 459/841 (54%), Gaps = 116/841 (13%)

Query: 22  LDKPIISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTH 81
           ++   IS+  +  RFRR +          S+   P +EF  P+  + + E++ E +  T 
Sbjct: 192 MNNNFISQLPIEKRFRRDIASSS----PASMHADPLIEFFNPNHRKALEEQDTEIRKRTG 247

Query: 82  -------NNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMG 131
                   + W++LN Y R+P   + GFC  T+EYCPP   GP   +G KG  G  G  G
Sbjct: 248 LKGAAPGGDEWIYLNTYCRVPEKIITGFCKGTQEYCPPAPAGPMGPVGPKGPTGNPGLPG 307

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           + G +G +G  G+ G PG  G+          G  G PGP         RGPKGD G  G
Sbjct: 308 IPGPKGNRGDVGLPGAPGVDGV----------GQQGAPGP---------RGPKGDPGAVG 348

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE----------- 240
           R GLDGRDG+PGEPGLDG+PGR G DG   K+GLPG+DG  G NG +G+           
Sbjct: 349 RAGLDGRDGVPGEPGLDGVPGRAGADG---KNGLPGRDGKDGLNGKDGKDGMSITGPKGA 405

Query: 241 ---------KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN-SETSQLLIPPTIV 290
                    KG+ GPRG  GK G NG PG P I  +K +     PN S ++ LLIPP+I 
Sbjct: 406 QGPPGERGLKGIAGPRGRPGKPGTNGTPGVPGINTWKMQ----YPNGSASNDLLIPPSIT 461

Query: 291 GSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNF 350
                     ++V EG  + + C ATG+P+P + W+  + + I +   + S+++   L F
Sbjct: 462 DVNAPNFRRNVIVEEGKTLNMSCSATGNPQPQVEWRRDDGRTINVNGIELSSISGQFLKF 521

Query: 351 TRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTATLECEVEA 395
             I R  M AY C A+N                 P I +  + +      +ATLEC+VEA
Sbjct: 522 GNITRHQMAAYTCYANNGIAPVANATFLVEVHFAPMISVYRQMIYAEYQSSATLECQVEA 581

Query: 396 FPLSVRYWE-FIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNE 454
           FP ++RYWE   DG +++    KY I     G ++  M+L ISN+   DF  Y C+++NE
Sbjct: 582 FPEAIRYWERAYDGKILDPSD-KYRIESYPDG-FKTSMRLTISNLRKDDFGYYHCVARNE 639

Query: 455 VDIAKGSLILFESNAKTPVPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKE- 513
           ++    +++ FE   + P        E+       K  GQ    PP+  CP C DQ  + 
Sbjct: 640 LN---ATMVNFEIAPQDP------NSEIPYVGNNVKIYGQR---PPESECPVC-DQCPDP 686

Query: 514 --FNCKEGYFAYDLLGRRDFDVKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKES 571
             + CK+           +F+++P GN S  GLP R   C +YAVGKPVFHK  + K   
Sbjct: 687 SLYQCKDSIL-------NNFEIQPTGNRSYPGLPKRVKTCYLYAVGKPVFHKVVNEK--- 736

Query: 572 SGKPVDVIFGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDA-KSWTYNLKE 630
                   +G+W++DP P   + EK ++T ++D  +L E+  +  ++ ++     Y + E
Sbjct: 737 --------YGSWLRDPAPREVDREKTFVTNENDAYNLFEFSTRTQYRVNSVPRHKYEISE 788

Query: 631 PFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSKIINI-VNLSTVDPNIKLYKTGYNVMDF 689
            FQGNAHVV+N SFYY +K S+ +V+ DL +SK I++ +  S +    +LY T YN MDF
Sbjct: 789 GFQGNAHVVYNGSFYYQQKNSDLVVKLDLTTSKKISVQLPYSGIATGNRLYATDYNYMDF 848

Query: 690 SLDENGLWVIYG-LSNNNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSV 748
           ++DE GLWVIY  L +NNT V KLD  TL++QY +NITL HK+ G+MF+VCG LY +DS 
Sbjct: 849 NVDEVGLWVIYSTLGSNNTLVAKLDAETLRMQYNFNITLDHKQFGEMFIVCGNLYAIDSG 908

Query: 749 TDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYH 808
           TD+NT IR+ +DLYK  LL  +L F+NPF+ TT + YN    +LY+WD+GN+LTYPIRY+
Sbjct: 909 TDKNTQIRYVVDLYKGKLLNANLPFSNPFSYTTTVGYNPLTVELYSWDKGNALTYPIRYN 968

Query: 809 E 809
           E
Sbjct: 969 E 969


>gi|242010709|ref|XP_002426102.1| colmedin, putative [Pediculus humanus corporis]
 gi|212510139|gb|EEB13364.1| colmedin, putative [Pediculus humanus corporis]
          Length = 551

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 277/569 (48%), Positives = 364/569 (63%), Gaps = 51/569 (8%)

Query: 285 IPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVA 344
           IP  +  + +     PIVVREG+NVR+RC A G PKP++ W+  +   I +GSWK  +V 
Sbjct: 10  IPGNVFRAGNFIPPKPIVVREGENVRMRCAAEGRPKPNVEWRKYDGSTIPVGSWKAISVP 69

Query: 345 SSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTATL 389
             TLN TRINR +MG YMC+ADN                 P I I+N+ +GV  G TA L
Sbjct: 70  GHTLNITRINRQHMGVYMCIADNGIPPPANQTFVLEVYFAPLIRIQNQLIGVVNGSTAIL 129

Query: 390 ECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRC 449
           ECEVEAFP SVRYWE  DG  IEH G KY I D +K  ++  MQLNI+NV ++D+  Y C
Sbjct: 130 ECEVEAFPESVRYWERADGRFIEH-GYKYRIGDTEKDKFRVKMQLNITNVGVNDYGLYHC 188

Query: 450 ISKNEVDIAKGSLILFESNAKTPVPTEKEQEEVTVYNRAPKPEGQ-DDLCPPQVLCPPCS 508
           I               +    TP P     + V +Y   P P    DD+CPPQ  CP C 
Sbjct: 189 IK-------------IDPGLATPPPVRIAGQGVAIYGEQPPPPVDFDDICPPQSPCPECP 235

Query: 509 DQNKEFNCKEGYFA-YDLLGRRDFDVKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSM 567
           D  KEF C+EG  + +DL+G+   ++KP GN +  GLPNRTLDC +YAVGKPV+H+ T  
Sbjct: 236 DP-KEFKCREGSISLFDLVGK--LEIKPFGNDTYPGLPNRTLDCLLYAVGKPVYHRYT-- 290

Query: 568 KKESSGKPVDVIFGAWMKDPHPTSGNS-EKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTY 626
                    D  +G+WM+DP P +  S E FW+T++SD THL E+ +K  ++ D  +  Y
Sbjct: 291 ---------DQTYGSWMRDPVPKNDASGEMFWVTSESDSTHLYEFANKSSYRKDIPTKVY 341

Query: 627 NLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSKIINI-VNLSTVDPNIKLYKTGYN 685
            L+ P +GN+HV++N SFYY+++    I++FDL +   +++ V +     N  LY T +N
Sbjct: 342 ELEHPLKGNSHVIYNGSFYYNEQNKPRILKFDLSTKTYVSLDVPMVATSGNNYLYTTEFN 401

Query: 686 VMDFSLDENGLWVIYGL-SNNNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYV 744
            +DFS+D+NGLWVIYGL SNNNT V K+D  TL+ QY W+I++ H KVG+MFV CGVLY 
Sbjct: 402 YVDFSVDDNGLWVIYGLPSNNNTIVMKIDPNTLKKQYMWDISINHHKVGEMFVTCGVLYA 461

Query: 745 VDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYP 804
           +DSVT+RNT IRFALDLYKN LL+VSL FTNPF  TTM+ YN R K+LYTWD+GN LTYP
Sbjct: 462 IDSVTERNTKIRFALDLYKNILLDVSLAFTNPFRKTTMVGYNHRTKELYTWDKGNQLTYP 521

Query: 805 IRYHEIDSYNLNKQEK--TDADMTTGVDI 831
           +RYHEI  YN++K+EK   +A+  TG DI
Sbjct: 522 VRYHEI-GYNVSKEEKGEPEANARTGFDI 549


>gi|194892219|ref|XP_001977620.1| GG19143 [Drosophila erecta]
 gi|190649269|gb|EDV46547.1| GG19143 [Drosophila erecta]
          Length = 940

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 331/846 (39%), Positives = 468/846 (55%), Gaps = 101/846 (11%)

Query: 9   RSRIPTLNCQAYTLDKPIISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYE- 67
           +SR P  N + +T +    +      R RR +          S+   P +EF  P+  + 
Sbjct: 143 QSRDPLKNERKFTDNLISHTPRPTGKRMRRDIASSA----PASMHADPLIEFFNPNHRKV 198

Query: 68  ------EIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQK 121
                 EIR+R  ++  +   + W++LN Y R+P   + GFC  T++YCPP  QGP G+ 
Sbjct: 199 LEEQDTEIRKRTGQKGAAPGGDEWIYLNTYCRVPEKIITGFCKGTQDYCPPAPQGPTGEV 258

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  G  G  G+ G  G KG  G VG PG  G+ G          +G+ GP G       R
Sbjct: 259 GPKGPPGNPGLPGIPGPKGNRGDVGLPGAPGVDG----------VGHLGPAG------PR 302

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---IPG---KDGLPGKDGIPGTN 235
           GPKGD G  GR GLDGRDG+PGEPGLDG+PGR G DG   +PG   KDGL GKDG  G +
Sbjct: 303 GPKGDAGVTGRAGLDGRDGVPGEPGLDGVPGRAGADGKNGLPGRDGKDGLHGKDGKDGLS 362

Query: 236 -----------GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN-SETSQL 283
                      G  G KG+ GPRG  GK G NG+PG P I A+K +     PN S ++ L
Sbjct: 363 ITGPKGAQGPPGERGLKGIAGPRGRPGKPGTNGIPGVPGINAWKLQ----YPNGSSSNDL 418

Query: 284 LIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV 343
           LIPP+I   +       ++V EG ++ L C ATG P P + W+  + + I +   + +++
Sbjct: 419 LIPPSITDIQLPDFQRTVIVEEGRSLNLSCTATGTPTPQVEWRREDGRTINVNGVEMASI 478

Query: 344 ASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTAT 388
           +   L FT I R  M AY C A+N                 P I +  + +      +AT
Sbjct: 479 SGQFLRFTNITRHQMAAYTCFANNGIAPVANATYLVEVQFAPMISVYRQMIYAEYQSSAT 538

Query: 389 LECEVEAFPLSVRYWE-FIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447
           LEC VEAFP ++RYWE   DG +++    KY I    +G ++  M+L ISN+   DF  Y
Sbjct: 539 LECLVEAFPEAIRYWERAYDGKILDPSD-KYGIESYPEG-FKTSMRLTISNLRKDDFGYY 596

Query: 448 RCISKNEVDIAKGSLILFESNAKTP-VPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPP 506
            C+++NE++    +++ FE   + P   T      + VY + P PE +   CP   +C  
Sbjct: 597 HCVARNELN---ATMVNFEIAPQDPNSETPYVGNNIKVYGQRP-PESE---CP---VCDQ 646

Query: 507 CSDQNKEFNCKEGYFAYDLLGRRDFDVKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTS 566
           C D +  + CK+           +F+++  GN+S  GLP R   C +YAVGKPVFHK  +
Sbjct: 647 CPDPSL-YQCKDSIL-------NNFEIQATGNLSYPGLPKRPKTCYLYAVGKPVFHKVVN 698

Query: 567 MKKESSGKPVDVIFGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDA-KSWT 625
            K           FG+W++DP P S + EK ++T ++DP +L E+  +  ++ ++     
Sbjct: 699 EK-----------FGSWLRDPSPDS-DREKTFVTNENDPYNLFEFTTRIQYRMNSIPRRK 746

Query: 626 YNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGS-SKIINIVNLSTVDPNIKLYKTGY 684
           Y ++E F GNAHVVFN SFYY ++ S+ +V+ DL S  KI   +  + V    +LY T Y
Sbjct: 747 YEIQEGFHGNAHVVFNGSFYYQQRNSDLVVKLDLTSLKKITTQLPYAGVAAANRLYATDY 806

Query: 685 NVMDFSLDENGLWVIYGLSN-NNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLY 743
           N MDF++DE GLWVIY   N NNT V KLDT TL++QY +NITL H + G+MF+VCG LY
Sbjct: 807 NYMDFNVDEVGLWVIYSTYNSNNTLVAKLDTETLKMQYNFNITLDHHQFGEMFIVCGNLY 866

Query: 744 VVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTY 803
            +DS TD+NT IR+ +DLYK  LL  +L F+NPF++TT + YN    +LY+WD+GN+LTY
Sbjct: 867 AIDSGTDKNTQIRYVVDLYKGKLLNTNLPFSNPFSHTTTVGYNPLTVELYSWDKGNALTY 926

Query: 804 PIRYHE 809
           PIRY+E
Sbjct: 927 PIRYNE 932


>gi|195567463|ref|XP_002107280.1| GD17379 [Drosophila simulans]
 gi|194204685|gb|EDX18261.1| GD17379 [Drosophila simulans]
          Length = 948

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 323/817 (39%), Positives = 457/817 (55%), Gaps = 97/817 (11%)

Query: 38  RHVDKDKGDIFDNSVPQTPHVEFVPPDLYE-------EIREREKEQQNSTHNNPWVWLNA 90
           + + +D       S+   P +EF  P+  +       EIR+R  ++  +   + W++LN 
Sbjct: 176 KRIRRDIASSAPASMHADPLIEFFNPNHRKVLEEQDTEIRKRTGQKGAAPGGDEWIYLNT 235

Query: 91  YSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
           Y R+P   + GFC  T++YCPP  QGP G+ G  G  G  G+ G  G KG  G VG PG 
Sbjct: 236 YCRVPEKIITGFCKGTQDYCPPAPQGPTGEVGPKGPPGNPGLPGIPGPKGNRGDVGLPGA 295

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+ G          +G+ GP G       RGPKGD G  GR GLDGRDG+PGEPGLDG+
Sbjct: 296 PGVDG----------VGHLGPAG------PRGPKGDAGVTGRAGLDGRDGVPGEPGLDGV 339

Query: 211 PGRNGMDG---IPG---KDGLPGKDGIPGTN-----------GTNGEKGMTGPRGNRGKS 253
           PGR G DG   +PG   KDGL GKDG  G +           G  G KG+ GPRG  GK 
Sbjct: 340 PGRAGADGKNGLPGRDGKDGLHGKDGKDGLSITGPKGAQGPPGERGLKGIAGPRGRPGKP 399

Query: 254 GINGVPGTPAICAYKRESCSLLPN-SETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLR 312
           G NG+PG P I A+K +     PN S ++ LLIPP+I   +       ++V EG ++ L 
Sbjct: 400 GTNGIPGVPGINAWKLQ----YPNGSSSNDLLIPPSITDIQVPDFQRTVIVEEGRSLNLS 455

Query: 313 CVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----- 367
           C ATG P P + W+  + + I +   + ++++   L FT I R  M AY C A+N     
Sbjct: 456 CTATGTPTPQVEWRREDGRTINVNGVEMASISGQFLRFTNITRHQMAAYTCFANNGIAPV 515

Query: 368 ----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWE-FIDGTLIEHDGV 416
                       P I +  + +      +ATLEC VEAFP ++RYWE   DG +++    
Sbjct: 516 ANATYLVEVQFAPMISVYRQMIYAEYQSSATLECLVEAFPEAIRYWERAYDGKILDPSD- 574

Query: 417 KYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP-VPT 475
           KY I    +G ++  M+L ISN+   DF  Y C+++NE++    +++ FE   + P   T
Sbjct: 575 KYGIESYPEG-FKTTMRLTISNLRKDDFGYYHCVARNELN---ATMVNFEIAPQDPNSET 630

Query: 476 EKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKP 535
                 + VY + P PE +   CP   +C  C D +  + CK+           +F+++ 
Sbjct: 631 PYVGNNMKVYGQRP-PESE---CP---VCDQCPDPSL-YQCKDSIL-------NNFEIQA 675

Query: 536 LGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSE 595
            GN+S  GLP R   C +YAVGKPVFHK  + K           FG+W++DP P S + E
Sbjct: 676 TGNLSYPGLPKRPKTCYLYAVGKPVFHKVVNEK-----------FGSWLRDPSPDS-DRE 723

Query: 596 KFWMTTDSDPTHLNEYKDKDMFKSDA-KSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSI 654
           K ++T ++DP +L E+  +  ++ ++     Y ++E F GNAHVVFN SFYY ++ S+ +
Sbjct: 724 KTFVTNENDPYNLFEFTTRIQYRMNSIPRRKYEIQEGFHGNAHVVFNGSFYYQQRNSDLV 783

Query: 655 VQFDLGS-SKIINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSN-NNTAVTKL 712
           V+ DL S  KI   +  + V    +LY T YN MDF++DE GLWVIY   N NNT V KL
Sbjct: 784 VKLDLTSLKKITTQLPYAGVAAANRLYTTDYNYMDFNVDEVGLWVIYSTYNSNNTLVAKL 843

Query: 713 DTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLN 772
           D  TL++QY +NITL H + G+MF+VCG LY +DS TD+NT IR+ +DLYK  LL  +L 
Sbjct: 844 DAETLKMQYNFNITLDHHQFGEMFIVCGNLYAIDSGTDKNTQIRYVVDLYKGKLLNTNLP 903

Query: 773 FTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
           F+NPF++TT + YN    +LY+WD+GN+LTYPIRY+E
Sbjct: 904 FSNPFSHTTTVGYNPLTVELYSWDKGNALTYPIRYNE 940


>gi|195396767|ref|XP_002057000.1| GJ16585 [Drosophila virilis]
 gi|194146767|gb|EDW62486.1| GJ16585 [Drosophila virilis]
          Length = 1000

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 322/841 (38%), Positives = 461/841 (54%), Gaps = 114/841 (13%)

Query: 26  IISKHNVSNRFRRH------VDKDKGDIFDNSVPQTPHVEFVPPDLYE-------EIRER 72
           + ++  ++N F  H      V +D       S+   P +EF  P+  +       EIR+R
Sbjct: 209 VRNERKLNNNFLTHLPNGKRVRRDIASSSPASMHADPLIEFFNPNHRKVLEEQDTEIRKR 268

Query: 73  EKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGP---IGQKGEIGAKGE 129
              +  +   + W++LN Y R+P   + GFC  T++YCPP   GP   IG KG  G  G 
Sbjct: 269 TGLKGAAPGGDDWIYLNTYCRVPEKIITGFCKGTQDYCPPAPAGPMGPIGPKGPTGNPGL 328

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G+ G +G +G  G+ G PG  G+ G +G  GP                  RGPKGD G 
Sbjct: 329 PGIPGPKGNRGDVGLPGAPGVDGV-GQQGATGP------------------RGPKGDPGA 369

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE--------- 240
            GR GLDGRDG+PGEPGLDG+PGR G DG   K+GLPG+DG  G NG +G+         
Sbjct: 370 VGRAGLDGRDGVPGEPGLDGVPGRAGADG---KNGLPGRDGKDGLNGKDGKDGMSITGPK 426

Query: 241 -----------KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN-SETSQLLIPPT 288
                      KG+ GPRG  GK G NG PG P I  +K +     PN S ++ LLIPP+
Sbjct: 427 GAQGPPGERGLKGIAGPRGRPGKPGTNGTPGVPGINTWKMQ----YPNGSASNDLLIPPS 482

Query: 289 IVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTL 348
           I   +       ++V EG  + + C ATG+P+P + W+  + + I +   + S+++   +
Sbjct: 483 ITDLKAPNYRRNVIVEEGKTLNMSCSATGNPQPQVEWRREDGRTINVNGIELSSISGQFI 542

Query: 349 NFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTATLECEV 393
            FT I R  M AY C A+N                 P I +  + +      +ATLEC+V
Sbjct: 543 KFTNITRHQMAAYTCHANNGIAPVANATFLVEVHFAPMISVYRQMIYAEYQSSATLECQV 602

Query: 394 EAFPLSVRYWE-FIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISK 452
           EAFP ++RYWE   DG +++    KY I     G ++  M+L ISN+   DF  Y C+++
Sbjct: 603 EAFPEAIRYWERAYDGKILDPSD-KYRIESYPDG-FKTSMRLTISNLRKDDFGYYHCVAR 660

Query: 453 NEVDIAKGSLILFESNAKTP-VPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQN 511
           NE++    +++ FE   + P   T      V VY + P PE +   CP   +C  C D +
Sbjct: 661 NELN---ATMVNFEIAPQDPNSETPYVGNNVKVYGQRP-PESE---CP---VCDQCPDPS 710

Query: 512 KEFNCKEGYFAYDLLGRRDFDVKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKES 571
             + CK+           +F+++P GN S  GLP R   C +YAVGKPVFHK  + K   
Sbjct: 711 L-YQCKDSIL-------NNFEIQPTGNRSYPGLPKRAKTCYLYAVGKPVFHKVVNEK--- 759

Query: 572 SGKPVDVIFGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDA-KSWTYNLKE 630
                   FG+W++D  P   + EK ++T ++D  +L E+  +  ++ ++     Y + E
Sbjct: 760 --------FGSWLRDAAPREADREKTFVTNENDAYNLFEFSTRIQYRMNSVPRHKYEISE 811

Query: 631 PFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSKIINI-VNLSTVDPNIKLYKTGYNVMDF 689
            FQGNAHVV+N SFYY +K S+ +V+ DL +SK I+I +  + V    +LY T YN MDF
Sbjct: 812 GFQGNAHVVYNGSFYYQQKNSDLVVKLDLTTSKKISIQLPYAGVAAGNRLYATDYNFMDF 871

Query: 690 SLDENGLWVIYGLSN-NNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSV 748
           ++DE GLWVIY   + NNT V KLD  TL++QY +NITL HK+ G+MF+VCG LY +DS 
Sbjct: 872 NVDEVGLWVIYSTHDSNNTLVAKLDAETLRMQYNFNITLDHKQFGEMFIVCGNLYAIDSG 931

Query: 749 TDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYH 808
           TD+NT IR+ +DLYK  LL  +L F+NPF+ TT + YN    +LY+WD+GN+LTYPIRY+
Sbjct: 932 TDKNTQIRYVVDLYKGKLLNANLPFSNPFSYTTTVGYNPLTVELYSWDKGNALTYPIRYN 991

Query: 809 E 809
           E
Sbjct: 992 E 992


>gi|45549584|ref|NP_573262.2| CG6867 [Drosophila melanogaster]
 gi|45447042|gb|AAF48788.2| CG6867 [Drosophila melanogaster]
          Length = 949

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 323/817 (39%), Positives = 457/817 (55%), Gaps = 97/817 (11%)

Query: 38  RHVDKDKGDIFDNSVPQTPHVEFVPPDLYE-------EIREREKEQQNSTHNNPWVWLNA 90
           + + +D       S+   P +EF  P+  +       EIR+R  ++  +   + W++LN 
Sbjct: 177 KRMRRDIASSAPASMHADPLIEFFNPNHRKVLEEQDTEIRKRTGQKGAAPGGDEWIYLNT 236

Query: 91  YSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
           Y R+P   + GFC  T++YCPP  QGP G+ G  G  G  G+ G  G KG  G VG PG 
Sbjct: 237 YCRVPEKIITGFCKGTQDYCPPAPQGPTGEVGPKGPPGNPGLPGIPGPKGNRGDVGLPGA 296

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+ G          +G+ GP G       RGPKGD G  GR GLDGRDG+PGEPGLDG+
Sbjct: 297 PGVDG----------VGHLGPAG------PRGPKGDAGATGRAGLDGRDGVPGEPGLDGV 340

Query: 211 PGRNGMDG---IPG---KDGLPGKDGIPGTN-----------GTNGEKGMTGPRGNRGKS 253
           PGR G DG   +PG   KDGL GKDG  G +           G  G KG+ GPRG  GK 
Sbjct: 341 PGRAGADGKNGLPGRDGKDGLHGKDGKDGLSITGPKGAQGPPGERGLKGIAGPRGRPGKP 400

Query: 254 GINGVPGTPAICAYKRESCSLLPN-SETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLR 312
           G NG+PG P I A+K +     PN S ++ LLIPP+I   +       ++V EG ++ L 
Sbjct: 401 GTNGIPGVPGINAWKLQ----YPNGSSSNDLLIPPSITDIQVPDFQRTVIVEEGRSLNLS 456

Query: 313 CVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----- 367
           C ATG P P + W+  + + I +   + ++++   L FT I R  M AY C A+N     
Sbjct: 457 CTATGTPTPQVEWRREDGRTINVNGVEMASISGQFLRFTNITRHQMAAYTCFANNGIAPV 516

Query: 368 ----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWE-FIDGTLIEHDGV 416
                       P I +  + +      +ATLEC VEAFP ++RYWE   DG +++    
Sbjct: 517 ANATYLVEVQFAPMISVYRQMIYAEYQSSATLECLVEAFPEAIRYWERAYDGKILDPSD- 575

Query: 417 KYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP-VPT 475
           KY I    +G ++  M+L ISN+   DF  Y C+++NE++    +++ FE   + P   T
Sbjct: 576 KYGIESYPEG-FKTTMRLTISNLRKDDFGYYHCVARNELN---ATMVNFEIAPQDPNSET 631

Query: 476 EKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKP 535
                 + VY + P PE +   CP   +C  C D +  + CK+           +F+++ 
Sbjct: 632 PYVGNNMKVYGQRP-PESE---CP---VCDQCPDPSL-YQCKDSIL-------NNFEIQA 676

Query: 536 LGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSE 595
            GN+S  GLP R   C +YAVGKPVFHK  + K           FG+W++DP P S + E
Sbjct: 677 TGNLSYPGLPKRPKTCYLYAVGKPVFHKVVNEK-----------FGSWLRDPSPDS-DRE 724

Query: 596 KFWMTTDSDPTHLNEYKDKDMFKSDA-KSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSI 654
           K ++T ++DP +L E+  +  ++ ++     Y ++E F GNAHVVFN SFYY ++ S+ +
Sbjct: 725 KTFVTNENDPYNLFEFTTRIQYRMNSIPRRKYEIQEGFHGNAHVVFNGSFYYQQRNSDLV 784

Query: 655 VQFDLGS-SKIINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSN-NNTAVTKL 712
           V+ DL S  KI   +  + V    +LY T YN MDF++DE GLWVIY   N NNT V KL
Sbjct: 785 VKLDLTSLKKITTQLPYAGVAAANRLYTTDYNYMDFNVDEVGLWVIYSTYNSNNTLVAKL 844

Query: 713 DTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLN 772
           D  TL++QY +NITL H + G+MF+VCG LY +DS TD+NT IR+ +DLYK  LL  +L 
Sbjct: 845 DAETLKMQYNFNITLDHHQFGEMFIVCGNLYAIDSGTDKNTQIRYVVDLYKGKLLNTNLP 904

Query: 773 FTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
           F+NPF++TT + YN    +LY+WD+GN+LTYPIRY+E
Sbjct: 905 FSNPFSHTTTVGYNPLTVELYSWDKGNALTYPIRYNE 941


>gi|195345339|ref|XP_002039227.1| GM22869 [Drosophila sechellia]
 gi|194134453|gb|EDW55969.1| GM22869 [Drosophila sechellia]
          Length = 948

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 324/809 (40%), Positives = 455/809 (56%), Gaps = 101/809 (12%)

Query: 50  NSVPQTPH----VEFVPPDLYE-------EIREREKEQQNSTHNNPWVWLNAYSRIPLVA 98
           +S P T H    +EF  P+  +       EIR+R  ++  +   + W++LN Y R+P   
Sbjct: 184 SSAPATLHADPLIEFFNPNHRKVLEEQDTEIRKRTGQKGAAPGGDEWIYLNTYCRVPEKI 243

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
           + GFC  T++YCPP  QGP G+ G  G  G  G+ G  G KG  G VG PG  G+ G   
Sbjct: 244 ITGFCKGTQDYCPPAPQGPTGEVGPKGPPGNPGLPGIPGPKGNRGDVGLPGTPGVDG--- 300

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
                  +G+ GP G       RGPKGD G  GR GLDGRDG+PGEPGLDG+PGR G DG
Sbjct: 301 -------VGHLGPAG------PRGPKGDAGVTGRAGLDGRDGVPGEPGLDGVPGRAGADG 347

Query: 219 ---IPG---KDGLPGKDGIPGTN-----------GTNGEKGMTGPRGNRGKSGINGVPGT 261
              +PG   KDGL GKDG  G +           G  G KG+ GPRG  GK G NG+PG 
Sbjct: 348 KNGLPGRDGKDGLHGKDGKDGLSITGPKGAQGPPGERGLKGIAGPRGRPGKPGTNGIPGV 407

Query: 262 PAICAYKRESCSLLPN-SETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPK 320
           P I A+K +     PN S ++ LLIPP+I   +       ++V EG ++ L C ATG P 
Sbjct: 408 PGINAWKLQ----YPNGSSSNDLLIPPSITDIQVPDFQRTVIVEEGRSLNLSCTATGTPT 463

Query: 321 PSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------------- 367
           P + W+  + + I +   + ++++   L FT I R  M AY C A+N             
Sbjct: 464 PQVEWRREDGRTINVNGVEMASISGQFLRFTNITRHQMAAYTCFANNGIAPVANATYLVE 523

Query: 368 --VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWE-FIDGTLIEHDGVKYSISDVD 424
               P I +  + +      +ATLEC VEAFP ++RYWE   DG +++    KY I    
Sbjct: 524 VQFAPMISVYRQMIYAEYQSSATLECLVEAFPEAIRYWERAYDGKILDPSD-KYGIESYP 582

Query: 425 KGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP-VPTEKEQEEVT 483
           +G ++  M+L ISN+   DF  Y C+++NE++    +++ FE   + P   T      + 
Sbjct: 583 EG-FKTTMRLTISNLRKDDFGYYHCVARNELN---ATMVNFEIAPQDPNSETPYVGNNMK 638

Query: 484 VYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKPLGNVSSKG 543
           VY + P PE +   CP   +C  C D +  + CK+           +F+++  GN+S  G
Sbjct: 639 VYGQRP-PESE---CP---VCDQCPDPSL-YQCKDSIL-------NNFEIQATGNLSYPG 683

Query: 544 LPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEKFWMTTDS 603
           LP R   C +YAVGKPVFHK  + K           FG+W++DP P S + EK ++T ++
Sbjct: 684 LPKRPKTCYLYAVGKPVFHKVVNEK-----------FGSWLRDPSPDS-DREKTFVTNEN 731

Query: 604 DPTHLNEYKDKDMFKSDA-KSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGS- 661
           DP +L E+  +  ++ ++     Y ++E F GNAHVVFN SFYY ++ S+ +V+ DL S 
Sbjct: 732 DPYNLFEFTTRIQYRMNSIPRRKYEIQEGFHGNAHVVFNGSFYYQQRNSDLVVKLDLTSL 791

Query: 662 SKIINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSN-NNTAVTKLDTATLQIQ 720
            KI   +  + V    +LY T YN MDF++DE GLWVIY   N NNT V KLD  TL++Q
Sbjct: 792 KKITTQLPYAGVAAANRLYTTDYNYMDFNVDEVGLWVIYSTYNSNNTLVAKLDAETLKMQ 851

Query: 721 YTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNT 780
           Y +NITL H + G+MF+VCG LY +DS TD+NT IR+ +DLYK  LL  +L F+NPF++T
Sbjct: 852 YNFNITLDHHQFGEMFIVCGNLYAIDSGTDKNTQIRYVVDLYKGKLLNTNLPFSNPFSHT 911

Query: 781 TMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
           T + YN    +LY+WD+GN+LTYPIRY+E
Sbjct: 912 TTVGYNPLTVELYSWDKGNALTYPIRYNE 940


>gi|195040180|ref|XP_001991018.1| GH12447 [Drosophila grimshawi]
 gi|193900776|gb|EDV99642.1| GH12447 [Drosophila grimshawi]
          Length = 953

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 322/817 (39%), Positives = 452/817 (55%), Gaps = 96/817 (11%)

Query: 38  RHVDKDKGDIFDNSVPQTPHVEFVPPDLYE-------EIREREKEQQNSTHNNPWVWLNA 90
           + + +D       S+   P +EF  P+  +       EIR+R   +  +   + W++LN 
Sbjct: 180 KRIRRDIASSSPASMHADPLIEFFNPNHRKALDEQDTEIRKRTGLKGAAPGGDEWIYLNT 239

Query: 91  YSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
           Y R+P   + GFC  T+EYCPP   GP G  G  G  G  G+ G  G KG  G VG PG 
Sbjct: 240 YCRVPEKIITGFCKGTQEYCPPAPSGPTGAVGPKGPPGNPGLPGIPGPKGNRGDVGLPGA 299

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+ G        G  G  GP         RGPKGD G  GR GLDGRDG+PGEPGLDG+
Sbjct: 300 AGVDG-------IGQQGAAGP---------RGPKGDPGSVGRSGLDGRDGVPGEPGLDGV 343

Query: 211 PGRNGMDG---IPG---KDGLPGKDGIPGTN-----------GTNGEKGMTGPRGNRGKS 253
           PGR G DG   +PG   KDG+ GKDG  G +           G  G KG+ GPRG  GK 
Sbjct: 344 PGRAGADGKNGLPGRDGKDGMHGKDGKDGMSITGPKGAQGPPGERGLKGIAGPRGRPGKP 403

Query: 254 GINGVPGTPAICAYKRESCSLLPN-SETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLR 312
           G NG PG P I  +K +     PN S ++ LLIPP+I           ++V EG  + + 
Sbjct: 404 GTNGTPGVPGINTWKMQ----FPNGSASNDLLIPPSITDVSSPNVRRSVIVEEGKTLNMS 459

Query: 313 CVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----- 367
           C ATG+P+P + W+  + + I +   + S+++   + FT I R  M AY C A+N     
Sbjct: 460 CSATGNPQPQVEWRRDDGRTINVNGVELSSISGQFIKFTNITRHQMAAYTCHANNGIAPV 519

Query: 368 ----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWE-FIDGTLIEHDGV 416
                       P I +  + +      +ATLEC+VEAFP ++RYWE   DG ++E    
Sbjct: 520 TNATFLVEVHFAPMISVYRQMIYAEYQSSATLECQVEAFPEAIRYWERAYDGKILEPSD- 578

Query: 417 KYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP-VPT 475
           KY I     G ++  M+L ISN+   DF  Y C+++NE++    +++ FE   + P   T
Sbjct: 579 KYRIESYPDG-FKTSMRLTISNLRKDDFGYYHCVARNELN---ATMVNFEIAPQDPNSET 634

Query: 476 EKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKP 535
                 V +Y + P PE +   CP   +C  C D +    CK+           +F+++P
Sbjct: 635 PYVGNNVKIYGQRP-PESE---CP---VCDQCPDPSLN-QCKDSIL-------NNFEIQP 679

Query: 536 LGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSE 595
            GN S  GLP R   C +YAVGKPVF+K  + K           FG+W++D  P   + E
Sbjct: 680 TGNRSYPGLPKRAKTCYLYAVGKPVFNKVVNEK-----------FGSWLRDAAPKDVDRE 728

Query: 596 KFWMTTDSDPTHLNEYKDKDMFKSDA-KSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSI 654
           K ++T ++D  +L E+  +  +++++     Y + E FQGNAHVV+N SFYYH+K S+ +
Sbjct: 729 KTFVTNENDAFNLFEFSTRIQYRTNSVPRHKYEISEGFQGNAHVVYNGSFYYHQKNSDLV 788

Query: 655 VQFDLGSSKIINI-VNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSN-NNTAVTKL 712
           V+ DL +SK I+I +  + V    +LY T YN MDF++DE GLWVIY   + NNT V KL
Sbjct: 789 VKLDLTTSKKISIQLPYAGVSTGNRLYATDYNFMDFNVDEVGLWVIYSTHDSNNTLVAKL 848

Query: 713 DTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLN 772
           D  TL++QY +NITL HK+ G+MF+VCG LY +DS TDRNT IR+ +DLYK  LL  +L 
Sbjct: 849 DAETLRMQYNFNITLDHKQFGEMFIVCGNLYAIDSGTDRNTQIRYVVDLYKGKLLNANLP 908

Query: 773 FTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
           F+NPF++TT + YN    +LY+WD+GN+LTYPIRY+E
Sbjct: 909 FSNPFSHTTTVGYNPLTVELYSWDKGNALTYPIRYNE 945


>gi|25012707|gb|AAN71447.1| RE59052p [Drosophila melanogaster]
          Length = 949

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 322/817 (39%), Positives = 456/817 (55%), Gaps = 97/817 (11%)

Query: 38  RHVDKDKGDIFDNSVPQTPHVEFVPPDLYE-------EIREREKEQQNSTHNNPWVWLNA 90
           + + +D       S+   P +EF  P+  +       EIR+R  ++  +   + W++LN 
Sbjct: 177 KRMRRDIASSAPASMHADPLIEFFNPNHRKVLEEQDTEIRKRTGQKGAAPGGDEWIYLNT 236

Query: 91  YSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
           Y R+P   + GFC  T++YCPP  QGP G+ G  G  G  G+ G  G KG  G VG PG 
Sbjct: 237 YCRVPEKIITGFCKGTQDYCPPAPQGPTGEVGPKGPPGNPGLPGIPGPKGNRGDVGLPGA 296

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+ G          +G+ GP G       RGPKGD G  GR GLDGRDG+PGEPGLDG+
Sbjct: 297 PGVDG----------VGHLGPAG------PRGPKGDAGATGRAGLDGRDGVPGEPGLDGV 340

Query: 211 PGRNGMDG---IPG---KDGLPGKDGIPGTN-----------GTNGEKGMTGPRGNRGKS 253
           PGR G DG   +PG   KDGL GKDG  G +           G  G KG+ GPRG  GK 
Sbjct: 341 PGRAGADGKNGLPGRDGKDGLHGKDGKDGLSITGPKGAQGPPGERGLKGIAGPRGRPGKP 400

Query: 254 GINGVPGTPAICAYKRESCSLLPN-SETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLR 312
           G NG+PG P I A+K +     PN S ++ LLIPP+I   +       ++V EG ++ L 
Sbjct: 401 GTNGIPGVPGINAWKLQ----YPNGSSSNDLLIPPSITDIQVPDFQRTVIVEEGRSLNLS 456

Query: 313 CVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----- 367
           C ATG P P + W+  + + + +   + ++++   L FT I R  M AY C A+N     
Sbjct: 457 CTATGTPTPQVEWRREDGRTVNVNGVEMASISGQFLRFTNITRHQMAAYTCFANNGIAPV 516

Query: 368 ----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWE-FIDGTLIEHDGV 416
                       P I +  + +      +ATLEC VEAFP ++RYWE   DG +++    
Sbjct: 517 ANATYLVEVQFAPMISVYRQMIYAEYQSSATLECLVEAFPEAIRYWERAYDGKILDPSD- 575

Query: 417 KYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP-VPT 475
           KY I    +G ++  M+L ISN+   DF  Y C+++NE++    +++ FE   + P   T
Sbjct: 576 KYGIESYPEG-FKTTMRLTISNLRKDDFGYYHCVARNELN---ATMVNFEIAPQDPNSET 631

Query: 476 EKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKP 535
                 + VY + P PE +   CP   +C  C D +  + CK+           +F+++ 
Sbjct: 632 PYVGNNMKVYGQRP-PESE---CP---VCDQCPDPSL-YQCKDSIL-------NNFEIQA 676

Query: 536 LGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSE 595
            GN+S  GLP R   C +YAVGKPVFHK  + K           FG+W++DP P S + E
Sbjct: 677 TGNLSYPGLPKRPKTCYLYAVGKPVFHKVVNEK-----------FGSWLRDPSPDS-DRE 724

Query: 596 KFWMTTDSDPTHLNEYKDKDMFKSDA-KSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSI 654
           K ++T ++DP +L E+  +  ++ ++     Y ++E F GNAHVVFN SFYY ++ S+ +
Sbjct: 725 KTFVTNENDPYNLFEFTTRIQYRMNSIPRRKYEIQEGFHGNAHVVFNGSFYYQQRNSDLV 784

Query: 655 VQFDLGS-SKIINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSN-NNTAVTKL 712
           V+ DL S  KI   +  + V    +LY T YN MDF++DE GLWVIY   N NNT V KL
Sbjct: 785 VKLDLTSLKKITTQLPYAGVAAANRLYTTDYNYMDFNVDEVGLWVIYSTYNSNNTLVAKL 844

Query: 713 DTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLN 772
           D  TL++QY +NITL H + G MF+VCG LY +DS TD+NT IR+ +DLYK  LL  +L 
Sbjct: 845 DAETLKMQYNFNITLDHHQFGAMFIVCGNLYAIDSGTDKNTQIRYVVDLYKGKLLNTNLP 904

Query: 773 FTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
           F+NPF++TT + YN    +LY+WD+GN+LTYPIRY+E
Sbjct: 905 FSNPFSHTTTVGYNPLTVELYSWDKGNALTYPIRYNE 941


>gi|224586954|gb|ACN58576.1| RT01583p [Drosophila melanogaster]
          Length = 865

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 322/817 (39%), Positives = 456/817 (55%), Gaps = 97/817 (11%)

Query: 38  RHVDKDKGDIFDNSVPQTPHVEFVPPDLYE-------EIREREKEQQNSTHNNPWVWLNA 90
           + + +D       S+   P +EF  P+  +       EIR+R  ++  +   + W++LN 
Sbjct: 93  KRMRRDIASSAPASMHADPLIEFFNPNHRKVLEEQDTEIRKRTGQKGAAPGGDEWIYLNT 152

Query: 91  YSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
           Y R+P   + GFC  T++YCPP  QGP G+ G  G  G  G+ G  G KG  G VG PG 
Sbjct: 153 YCRVPEKIITGFCKGTQDYCPPAPQGPTGEVGPKGPPGNPGLPGIPGPKGNRGDVGLPGA 212

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+ G          +G+ GP G       RGPKGD G  GR GLDGRDG+PGEPGLDG+
Sbjct: 213 PGVDG----------VGHLGPAG------PRGPKGDAGATGRAGLDGRDGVPGEPGLDGV 256

Query: 211 PGRNGMDG---IPG---KDGLPGKDGIPGTN-----------GTNGEKGMTGPRGNRGKS 253
           PGR G DG   +PG   KDGL GKDG  G +           G  G KG+ GPRG  GK 
Sbjct: 257 PGRAGADGKNGLPGRDGKDGLHGKDGKDGLSITGPKGAQGPPGERGLKGIAGPRGRPGKP 316

Query: 254 GINGVPGTPAICAYKRESCSLLPN-SETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLR 312
           G NG+PG P I A+K +     PN S ++ LLIPP+I   +       ++V EG ++ L 
Sbjct: 317 GTNGIPGVPGINAWKLQ----YPNGSSSNDLLIPPSITDIQVPDFQRTVIVEEGRSLNLS 372

Query: 313 CVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----- 367
           C ATG P P + W+  + + + +   + ++++   L FT I R  M AY C A+N     
Sbjct: 373 CTATGTPTPQVEWRREDGRTVNVNGVEMASISGQFLRFTNITRHQMAAYTCFANNGIAPV 432

Query: 368 ----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWE-FIDGTLIEHDGV 416
                       P I +  + +      +ATLEC VEAFP ++RYWE   DG +++    
Sbjct: 433 ANATYLVEVQFAPMISVYRQMIYAEYQSSATLECLVEAFPEAIRYWERAYDGKILDPSD- 491

Query: 417 KYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP-VPT 475
           KY I    +G ++  M+L ISN+   DF  Y C+++NE++    +++ FE   + P   T
Sbjct: 492 KYGIESYPEG-FKTTMRLTISNLRKDDFGYYHCVARNELN---ATMVNFEIAPQDPNSET 547

Query: 476 EKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKP 535
                 + VY + P PE +   CP   +C  C D +  + CK+           +F+++ 
Sbjct: 548 PYVGNNMKVYGQRP-PESE---CP---VCDQCPDPSL-YQCKDSIL-------NNFEIQA 592

Query: 536 LGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSE 595
            GN+S  GLP R   C +YAVGKPVFHK  + K           FG+W++DP P S + E
Sbjct: 593 TGNLSYPGLPKRPKTCYLYAVGKPVFHKVVNEK-----------FGSWLRDPSPDS-DRE 640

Query: 596 KFWMTTDSDPTHLNEYKDKDMFKSDA-KSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSI 654
           K ++T ++DP +L E+  +  ++ ++     Y ++E F GNAHVVFN SFYY ++ S+ +
Sbjct: 641 KTFVTNENDPYNLFEFTTRIQYRMNSIPRRKYEIQEGFHGNAHVVFNGSFYYQQRNSDLV 700

Query: 655 VQFDLGS-SKIINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSN-NNTAVTKL 712
           V+ DL S  KI   +  + V    +LY T YN MDF++DE GLWVIY   N NNT V KL
Sbjct: 701 VKLDLTSLKKITTQLPYAGVAAANRLYTTDYNYMDFNVDEVGLWVIYSTYNSNNTLVAKL 760

Query: 713 DTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLN 772
           D  TL++QY +NITL H + G MF+VCG LY +DS TD+NT IR+ +DLYK  LL  +L 
Sbjct: 761 DAETLKMQYNFNITLDHHQFGAMFIVCGNLYAIDSGTDKNTQIRYVVDLYKGKLLNTNLP 820

Query: 773 FTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
           F+NPF++TT + YN    +LY+WD+GN+LTYPIRY+E
Sbjct: 821 FSNPFSHTTTVGYNPLTVELYSWDKGNALTYPIRYNE 857


>gi|195481213|ref|XP_002101561.1| GE17702 [Drosophila yakuba]
 gi|194189085|gb|EDX02669.1| GE17702 [Drosophila yakuba]
          Length = 948

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 326/846 (38%), Positives = 465/846 (54%), Gaps = 101/846 (11%)

Query: 9   RSRIPTLNCQAYTLDKPIISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYE- 67
           ++R P  N + +T +    +      R RR +          S+   P +EF  P+  + 
Sbjct: 151 QARDPLKNERKFTDNLISHTPRPTGKRMRRDIASSA----PASMHADPLIEFFNPNHRKV 206

Query: 68  ------EIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQK 121
                 EIR+R  ++  +   + W++LN Y R+P   + GFC  T++YCPP  QGP G+ 
Sbjct: 207 LEEQDTEIRKRTGQKGAAPGGDEWIYLNTYCRVPEKIITGFCKGTQDYCPPAPQGPTGEV 266

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  G  G  G+ G  G KG  G VG PG  G+ G          +G+ GP       G R
Sbjct: 267 GPKGPPGNPGLPGIPGPKGNRGDVGLPGAPGVDG----------VGHLGP------AGPR 310

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------NGMDGIPGKDGLPGKDGIPGTN 235
           GPKGD G  GR GLDGRDG+PGEPGLDG+PGR      NG+ G  GKDGL GKDG  G +
Sbjct: 311 GPKGDAGVTGRAGLDGRDGVPGEPGLDGVPGRAGADGKNGLAGRDGKDGLHGKDGKDGLS 370

Query: 236 -----------GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN-SETSQL 283
                      G  G KG+ GPRG  GK G NG+PG P I A+K +     PN S ++ L
Sbjct: 371 ITGPKGAQGPPGERGLKGIAGPRGRPGKPGTNGIPGVPGINAWKLQ----YPNGSSSNDL 426

Query: 284 LIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV 343
           LIPP+I   +       ++V EG ++ L C ATG P P + W+  + + I +   + +++
Sbjct: 427 LIPPSITDLQMPDFQRTVIVEEGRSLNLSCTATGTPTPQVEWRREDGRTINVNGVEMASI 486

Query: 344 ASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTAT 388
           +   L FT I R  M AY C A+N                 P I +  + +      +AT
Sbjct: 487 SGQFLRFTNITRHQMAAYTCYANNGIAPVANATYLVEVQFAPMISVYRQMIYAEYQSSAT 546

Query: 389 LECEVEAFPLSVRYWE-FIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447
           LEC VEAFP +++YWE   DG +++    KY I    +G ++  M+L ISN+   DF  Y
Sbjct: 547 LECLVEAFPEAIKYWERAYDGKILDPSD-KYGIESYPEG-FKTTMRLTISNLRKDDFGYY 604

Query: 448 RCISKNEVDIAKGSLILFESNAKTP-VPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPP 506
            C+++NE++    +++ FE   + P   T      + VY + P PE +   CP   +C  
Sbjct: 605 HCVARNELN---ATMVNFEIAPQDPNSETPYVGNNIKVYGQRP-PESE---CP---VCDQ 654

Query: 507 CSDQNKEFNCKEGYFAYDLLGRRDFDVKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTS 566
           C D +  + CK+           +F+++  GN+S  GLP R   C +YAVGKPVFHK  +
Sbjct: 655 CPDPSL-YQCKDSIL-------NNFEIQATGNLSYPGLPKRPKTCYLYAVGKPVFHKVVN 706

Query: 567 MKKESSGKPVDVIFGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDA-KSWT 625
            K           FG+W++DP P   + EK ++T ++DP +L E+  +  ++ ++     
Sbjct: 707 EK-----------FGSWLRDPSPDC-DREKTFVTNENDPYNLFEFTTRIQYRMNSIPRRK 754

Query: 626 YNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGS-SKIINIVNLSTVDPNIKLYKTGY 684
           Y ++E F GNAHVVFN SFYY +K S+ +V+ DL S  KI   +  + V    +LY T Y
Sbjct: 755 YEIQEGFHGNAHVVFNGSFYYQQKNSDLVVKLDLTSLKKITTQLPYAGVAAANRLYTTDY 814

Query: 685 NVMDFSLDENGLWVIYG-LSNNNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLY 743
           N MDF++DE GLWVIY    +NNT V KLD  TL++QY +NITL H + G+MF+VCG LY
Sbjct: 815 NYMDFNVDEVGLWVIYSTYHSNNTLVAKLDAETLKMQYNFNITLDHHQFGEMFIVCGNLY 874

Query: 744 VVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTY 803
            +DS TD+NT IR+ +DLYK  LL  +L F+NPF++TT + YN    +LY+WD+GN+LTY
Sbjct: 875 AIDSGTDKNTQIRYVVDLYKGKLLNTNLPFSNPFSHTTTVGYNPLTVELYSWDKGNALTY 934

Query: 804 PIRYHE 809
           PIRY+E
Sbjct: 935 PIRYNE 940


>gi|357619457|gb|EHJ72021.1| colmedin [Danaus plexippus]
          Length = 722

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 292/767 (38%), Positives = 419/767 (54%), Gaps = 116/767 (15%)

Query: 85  WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
           WVWL +YSR+P   +QGFC +T++YCPPG+QGP         KG MG  G +G++G+PG 
Sbjct: 28  WVWLTSYSRVPYKVVQGFCKATQDYCPPGVQGP---------KGPMGHPGPKGDRGSPGE 78

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---GRDGL 201
            G PG  G  G  G  GPKG+ G+PG  G+ G +G  G  G  G PGR G D   GR G 
Sbjct: 79  AGIPGSPGSVGPFGPPGPKGERGFPGNPGLDGRDGVPGEPGLDGLPGRNGADGAPGRYGQ 138

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG DGIPG+NG D   GKDG  G  G PG  G  GE+G  GP+G +G  G+NG+PG 
Sbjct: 139 DGIPGRDGIPGKNGKD---GKDGKVGAQGPPGIRGPKGERGPIGPKGPKGNDGLNGIPGK 195

Query: 262 PAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKP 321
           P +  Y          ++ +Q+ IPP+         +  ++VREGD +RL C   G P+P
Sbjct: 196 PGLSIYNY--------TKENQMFIPPSFA-----LDNPRLIVREGDTMRLDCNPKGFPEP 242

Query: 322 SIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLAD--------------- 366
            I W+ ++  PI  GSW+D++V+   LN   ++R + G Y+CLA+               
Sbjct: 243 IIEWRRADGTPIIQGSWRDASVSGHVLNIPNVSRWHTGKYVCLANNGMQPPANQTTDVEV 302

Query: 367 NVPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKG 426
           N  P I + N  V V   +TA +ECE++A+P  V  WE+ DGT +E    K  ++     
Sbjct: 303 NFSPYIRVPNNIVYV-FNKTAQIECEIQAWPEPVLAWEYDDGTTVEGSHYKIEVAPTPD- 360

Query: 427 SYQYIMQLNISNVNISDFDTYRCISKNEVD--IAKGSLILFESNAK-------------T 471
            +++IM+L I ++N  D   Y C++KNE++    +G + L     K             +
Sbjct: 361 PWRWIMKLEIPHINEHDMRQYICVAKNELNNTTVRGYIRLSHPGPKQQSQIQQQPREFGS 420

Query: 472 PVPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDF 531
           P PT    EE+    R P              CP C                     R  
Sbjct: 421 PPPTLTSYEELCSAQRCPS-------------CPRCD--------------------RAL 447

Query: 532 DVKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTS 591
            + P+ N S    P+R  +CQ+YA+GKPV+HK    K+E        +FGAW++D + + 
Sbjct: 448 MITPM-NASLGNKPHRNTNCQLYAIGKPVYHK---YKEE--------LFGAWLRDSNSSE 495

Query: 592 GNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFS 651
              EK W T ++D   L+E++ K  FKSD     + L++PF GN H+V++ SF+Y    S
Sbjct: 496 AQREKLWTTQENDVERLHEFRSKASFKSDRVDEFHKLQKPFFGNGHIVYSGSFFYQANES 555

Query: 652 NS---IVQFDLGSSKIINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLS-NNNT 707
            +   IV++DL  S+   I +        +LY   +N +DFS D+NGLW IY +  +NNT
Sbjct: 556 GTPGDIVRYDLTQSR---IKSAHLPHAQGRLYTAQHNQVDFSADDNGLWAIYSIEGSNNT 612

Query: 708 AVTKL----DTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYK 763
           AV KL    +   L I Y WNI+L HK+VG+MF+VCGVLY +DS T+R++ +  A+DLY 
Sbjct: 613 AVAKLSFDPNKDDLNIDYIWNISLNHKQVGEMFIVCGVLYALDSATERDSKVSIAIDLYL 672

Query: 764 NDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHEI 810
           +  ++V+L FTNPF  TT + Y+  +K+LY+WDRGN LTYP+RY+E+
Sbjct: 673 SKSIDVTLQFTNPFRKTTQLGYDHTHKELYSWDRGNQLTYPVRYNEL 719


>gi|270011036|gb|EFA07484.1| colmedin [Tribolium castaneum]
          Length = 779

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 279/666 (41%), Positives = 378/666 (56%), Gaps = 93/666 (13%)

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           +G +GD G+PG  G  G  GLPG PG  G  GR G+DG         +DGIPG       
Sbjct: 190 KGDRGDKGFPGVPGQMGHRGLPGLPGEKGSQGRPGLDG---------RDGIPG------- 233

Query: 241 KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSP 300
             +TGP+G  G+ G +G PG P    Y+      +     S+LLIPP+I G++      P
Sbjct: 234 --LTGPKGKPGRHGRDGDPGKPGGTFYQ------INGKNVSELLIPPSIAGAQAT-PMGP 284

Query: 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGA 360
           IVV EG+NVRL C A G P P + W     +P++ G+W                      
Sbjct: 285 IVVHEGENVRLHCSAIGTPNPHVTWMKLGKRPVSRGAW---------------------- 322

Query: 361 YMCLADNVPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSI 420
                 +VPP I I N+ V VP G +A LECE EAFP S+RYWE  DG L+E +G KY I
Sbjct: 323 ------HVPPLIRIYNQVVEVPTGSSAVLECETEAFPESIRYWERSDGRLLE-NGNKYQI 375

Query: 421 SD-VDKGSYQYIMQLNISNVNISDFD-TYRCISKNEVDIAKGSLILFESNAKTPVPTEKE 478
            + +D+  Y+  MQLNI+ V+ +D    Y C+SKNE+   +G L + E     P     +
Sbjct: 376 DNSLDRDLYKARMQLNITRVHSNDMTYKYYCVSKNELKTIRGELQIQEQQPGRPRQQLND 435

Query: 479 QEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKPLGN 538
           ++     N  P    ++DLC P V CP C     E     G    DL+ R  ++++  GN
Sbjct: 436 KKTSIFGNLPPIQVSEEDLCGPPVQCPEC-----EACSASGVSLIDLISR--WNIRKFGN 488

Query: 539 VS-SKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHP-TSGNSEK 596
           +   K   NRT +C +YAVGKPV+H+ +               G WM+D +P    ++EK
Sbjct: 489 IMYDKDYANRTTNCVLYAVGKPVYHRYSDHNN-----------GCWMRDSNPLVEKDAEK 537

Query: 597 FWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQ 656
           FW+T + DP+HL ++ +K MF+ +A S TY L  PFQGNAHV++N SFYY+ K SN I++
Sbjct: 538 FWVTQEDDPSHLFQFDNKTMFRRNAPSRTYVLSYPFQGNAHVIYNGSFYYNAKASNKIIK 597

Query: 657 FDLGSSKIINIVNLSTVDP----NIKLYKTGYNVMDFSLDENGLWVIYGLSNNNTAVTKL 712
           F+L +S   +  NLS   P    +  LY   YN MDFS+D+NGLWVI+ + ++N   T +
Sbjct: 598 FNLQTS---HSDNLSLPFPYPLNSSNLYTAQYNYMDFSVDDNGLWVIFPVPDSNN--TAM 652

Query: 713 DTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLN 772
           D   ++I Y WN+++ H KVG+MF+VCGVLY VDSVTDRNT IRFALDLY   LL+V+L 
Sbjct: 653 DVNLMKINYIWNVSINHNKVGEMFIVCGVLYAVDSVTDRNTKIRFALDLYNEKLLDVNLA 712

Query: 773 FTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHEIDSYNLNKQ-------EKTDADM 825
           F+NPF  TTMI YN R K+LYTWD+GN LTYP+RYHE   YN+  +       E    DM
Sbjct: 713 FSNPFRKTTMIGYNHRNKELYTWDKGNQLTYPVRYHE-SGYNMTDRDDKIFASEFAQRDM 771

Query: 826 TTGVDI 831
            TG ++
Sbjct: 772 PTGYNV 777



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 158/370 (42%), Gaps = 72/370 (19%)

Query: 26  IISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHN--- 82
           I+ +H    R RR  D  +     NS    PHVEF  P++   + ++++  +  T N   
Sbjct: 85  ILQEHQKGTRRRRDADDYQ---MLNSPSDEPHVEFFSPEMRSTLEKKDELIRQQTGNKGA 141

Query: 83  ----NPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE 138
               + W+WL +YSRIP  A++G+C    ++C      P G+ G  G  G  G KG+RG+
Sbjct: 142 APGGDSWIWLTSYSRIPEKALEGYCKKVHQFC------PPGRPGPTGPPGSQGPKGDRGD 195

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
           KG PGV G  G +G+PG  G++G +G  G  G  GIP   G  GPKG    PGR    GR
Sbjct: 196 KGFPGVPGQMGHRGLPGLPGEKGSQGRPGLDGRDGIP---GLTGPKGK---PGR---HGR 246

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           DG PG+PG                            NG N  + +  P      +G    
Sbjct: 247 DGDPGKPG----------------------GTFYQINGKNVSELLIPP----SIAGAQAT 280

Query: 259 PGTPAICAYK---RESCSLL--PNSETSQLLI--PPTIVGSEHI-----FSSSPIVVREG 306
           P  P +       R  CS +  PN   + + +   P   G+ H+       +  + V  G
Sbjct: 281 PMGPIVVHEGENVRLHCSAIGTPNPHVTWMKLGKRPVSRGAWHVPPLIRIYNQVVEVPTG 340

Query: 307 DNVRLRCVATGHPKPSIIWKTSENKPITLGSW--------KDSAVASSTLNFTRINRINM 358
            +  L C     P+    W+ S+ + +  G+         +D   A   LN TR++  +M
Sbjct: 341 SSAVLECETEAFPESIRYWERSDGRLLENGNKYQIDNSLDRDLYKARMQLNITRVHSNDM 400

Query: 359 G-AYMCLADN 367
              Y C++ N
Sbjct: 401 TYKYYCVSKN 410


>gi|328793176|ref|XP_001121395.2| PREDICTED: hypothetical protein LOC725563 [Apis mellifera]
          Length = 818

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 291/764 (38%), Positives = 402/764 (52%), Gaps = 121/764 (15%)

Query: 85  WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
           WVWLNA +R+ L A++ FC S+ +YCPPGL                           PG 
Sbjct: 118 WVWLNADTRVQLDAIENFCRSSMKYCPPGL---------------------------PGA 150

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            G PG  G PG  G +GPKG  G  GP G  G +G  GP G          DGRDG+PGE
Sbjct: 151 PGSPGAPGEPGISGLQGPKGSSGLTGPPGPRGPKGDIGPSG---------FDGRDGIPGE 201

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG------------MTGPRGNRGK 252
           PGLDGIPGR+G+DG+PG +G PG +G PG  G NG  G              G  G  G+
Sbjct: 202 PGLDGIPGRSGLDGLPGINGKPGLNGSPGRPGRNGTDGRPGQMGPQGPPGPRGEMGPPGR 261

Query: 253 SGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIV-VREGDNVRL 311
            G+ G  G P I A+K      + N  T  LLIPP+I+G     +S+ ++ V EG N+RL
Sbjct: 262 PGLPGQDGKPGITAWKVN----MNNYNTDDLLIPPSILGKSVTLNSTGLISVYEGTNLRL 317

Query: 312 RCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN-VPP 370
           +C A+G P+P + W  S+   I +GSW  +++   T N + +NR +MG Y C+ADN VPP
Sbjct: 318 KCAASGKPEPVVQWFRSDGIIIPIGSWHVTSIIGHTFNISVVNREHMGEYTCVADNGVPP 377

Query: 371 Q--------------ILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGV 416
           +              I IRN+ + V     A LECEVEAFP  + YWE  DG  ++    
Sbjct: 378 RAFKKFKLQVKFSPFIRIRNQMIHVRSQSIAVLECEVEAFPEPITYWEREDGRRLK---- 433

Query: 417 KYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPVPTE 476
                          M+L I+ +   D  TY C+ KN+VD  KGS I+ +          
Sbjct: 434 ---------------MRLKITKITSVDHGTYYCVVKNDVDTTKGSFIVNDDIKNMEKSKI 478

Query: 477 KEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKPL 536
            +Q+ +T    AP+    ++LC P   C  C      F     Y           +++PL
Sbjct: 479 GKQQYITYGKPAPQHVDLEELCAPHETCAACPVLRCTFTDIAEYL----------NIQPL 528

Query: 537 GNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEK 596
            NV+  GLP R  D  + AVGKPV   +           +D  +G+WM D   +    EK
Sbjct: 529 KNVTFSGLPPRLADGIIEAVGKPVLKGT-----------MDDHYGSWMHDTFKSDIYPEK 577

Query: 597 FWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQ 656
            W+T  ++ + + EYK KD FK +A S++  L  PFQGN HVV+N SF+Y+    +SI +
Sbjct: 578 LWVTRKNETSFIFEYKSKDHFK-NASSYSIALPYPFQGNGHVVYNRSFFYNPINRSSIFR 636

Query: 657 FDLGS--SKIINI------VNLSTVDPNIKLY----KTGYNVMDFSLDENGLWVIYGLSN 704
           F+L S   ++ +       ++L  +  N K Y       +N +DF++DENGLWVIYGL +
Sbjct: 637 FNLHSISDQVCDKEFSRCELHLPGLLVNTKNYLYTPNHNFNYVDFNVDENGLWVIYGLPS 696

Query: 705 NNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKN 764
           NNT V K+D   + IQ+ WNI++ + K G+MF+  GVLY V SVT+    IR A DLYKN
Sbjct: 697 NNTVVIKMDATNMNIQHAWNISIDNHKFGEMFIAGGVLYAVHSVTEETMKIRLAFDLYKN 756

Query: 765 DLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYH 808
             + V L+FTNP+  TT ++YN + K+LYTW++GN L YPI+Y 
Sbjct: 757 ITIPVHLSFTNPYHKTTAVSYNHKTKELYTWNKGNQLAYPIKYQ 800


>gi|340727499|ref|XP_003402080.1| PREDICTED: hypothetical protein LOC100648727 isoform 1 [Bombus
           terrestris]
          Length = 844

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 289/767 (37%), Positives = 403/767 (52%), Gaps = 104/767 (13%)

Query: 85  WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
           WVWLNA +R+ L A++ FC S+ +YCPPGL                         GAPG 
Sbjct: 120 WVWLNADTRVQLDAIENFCRSSMKYCPPGL------------------------PGAPGS 155

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            G PG  G+PG  G  GPKG  G  GP G  G +G  GP G          DGRDG+PGE
Sbjct: 156 PGAPGEPGLPGLRGMTGPKGPPGLTGPPGPRGPKGDIGPAG---------FDGRDGIPGE 206

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---NGTNGEKGMTGPRGNRGKSG------- 254
           PGLDGIPGR+G DG+ G +G PG +G PG    NGT+G  G  GP+G  G  G       
Sbjct: 207 PGLDGIPGRSGTDGLSGMNGKPGLNGSPGRPGRNGTDGRPGQMGPQGPIGPRGEMGPPGR 266

Query: 255 --INGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEH----IFSSSPIVVREGDN 308
               G  G P I A+K      + +   + LLIPP+I+        + S+  I + EG N
Sbjct: 267 PGSPGQDGRPGITAWKVN----MNDYNINDLLIPPSILDDRMLPSTVNSTGLISIYEGTN 322

Query: 309 VRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN- 367
           +RL+C A+G P+P++ W  S+   I +GSW  ++V   T N + +NR +MG Y+C+ADN 
Sbjct: 323 LRLKCAASGKPEPTVQWFRSDGGVIPIGSWHVTSVIGHTFNISIVNREHMGEYICVADNG 382

Query: 368 --------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEH 413
                          PP I IRN+ +      T  LECEVEAFP  + YWE  D  L   
Sbjct: 383 IPPRALKRIKLQVKFPPFIRIRNQMIRARSQSTVVLECEVEAFPEPIVYWEREDRRLKMS 442

Query: 414 DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPV 473
           +  +  + D  + +Y+  M+L I+ +  +D+ TY C+ KN++D  KGS  + +       
Sbjct: 443 EKYRLEVYD-RRDTYKLKMRLKIAKITSADYGTYHCVVKNDIDTTKGSFTVDDDAKSMEK 501

Query: 474 PTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDV 533
               +Q+ VT    AP+    D+LC P   C  C      F     Y           ++
Sbjct: 502 SKLGKQQHVTYGKPAPQHVDLDELCAPHETCAACPVLRCTFTDVAEYL----------NI 551

Query: 534 KPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGN 593
           +PL NV+  GLP R  D  + AVGKPV   +           +D  +G+WM D   + G 
Sbjct: 552 QPLKNVNFTGLPLRLADGVIEAVGKPVLKGT-----------MDDHYGSWMHDTK-SDGY 599

Query: 594 SEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNS 653
            EK W+T  ++ + + EY  KD FK  + S+   L  PFQGN HVV+N SF+Y+    +S
Sbjct: 600 PEKLWVTRKNETSFIFEYDSKDHFKHGS-SYPIKLPYPFQGNGHVVYNKSFFYNPINRSS 658

Query: 654 IVQFDL--------GSSKIINIVNLSTVDPNIKLY----KTGYNVMDFSLDENGLWVIYG 701
           I +F+L        G       ++L  +  N + Y       +N +DF++DENGLW+IYG
Sbjct: 659 IFRFNLHSISDQVCGKESSRCELHLPGLLVNTRNYLYTPNHNFNYVDFNVDENGLWIIYG 718

Query: 702 LSNNNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDL 761
           L +NNT V K+D   + IQ+ WNI++ + K G+MF+  GVLY V SVT+    IR A DL
Sbjct: 719 LPSNNTIVIKMDATNMNIQHAWNISIDNHKFGEMFIAGGVLYAVHSVTEETMKIRLAFDL 778

Query: 762 YKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYH 808
           YKN  + V L+FTNP+  TT ++YN + K+LYTW++GN L YPI+Y 
Sbjct: 779 YKNVTIPVHLSFTNPYHKTTAVSYNHKTKELYTWNKGNQLAYPIKYQ 825


>gi|350422948|ref|XP_003493338.1| PREDICTED: hypothetical protein LOC100746790 isoform 1 [Bombus
           impatiens]
 gi|350422951|ref|XP_003493339.1| PREDICTED: hypothetical protein LOC100746790 isoform 2 [Bombus
           impatiens]
          Length = 843

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 292/767 (38%), Positives = 403/767 (52%), Gaps = 104/767 (13%)

Query: 85  WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
           WVWLNA +R+ L A++ FC S+ +YCPPGL                         GAPG 
Sbjct: 120 WVWLNADTRVQLDAIENFCRSSMKYCPPGL------------------------PGAPGS 155

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            G PG  G+PG  G  GPKG  G  GP G  G +G  GP G          DGRDG+PGE
Sbjct: 156 PGAPGEPGLPGLRGMTGPKGPPGLTGPPGPRGPKGDIGPAG---------FDGRDGIPGE 206

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---NGTNGEKGMTGPRGNRGKSG------- 254
           PGLDGIPGR+G DG+ G +G PG +G PG    NGT+G  G  GP+G  G  G       
Sbjct: 207 PGLDGIPGRSGTDGLSGMNGKPGLNGSPGRPGRNGTDGRPGQMGPQGPIGPRGEMGPPGR 266

Query: 255 --INGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEH----IFSSSPIVVREGDN 308
               G  G P I A+K      + +   + LLIPP+I+        + S+  I V EG N
Sbjct: 267 PGSPGQDGRPGITAWKVN----MNDYNINDLLIPPSILDDRMLPSTVNSTGLISVYEGTN 322

Query: 309 VRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN- 367
           +RL+C A+G P+P++ W  S+   I +GSW  ++V   T N + +NR +MG Y+C+ADN 
Sbjct: 323 LRLKCAASGKPEPTVQWFRSDGGVIPIGSWHVTSVIGHTFNISIVNREHMGEYICVADNG 382

Query: 368 --------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEH 413
                          PP I IRN+ +      T  LECEVEAFP  + YWE  D  L   
Sbjct: 383 IPPRALKRIKLQVKFPPFIRIRNQMIRARSQSTVVLECEVEAFPEPIVYWEREDRRLKMS 442

Query: 414 DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPV 473
           +  +  + D  +  Y+  M+L I+ +  +D+ TY C+ KN++D  KGS  + +       
Sbjct: 443 EKYRLEVYD-RRDMYKLKMRLKIAKITSADYGTYHCVVKNDIDTTKGSFTVDDDAKSMEK 501

Query: 474 PTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDV 533
               +Q+ VT    AP+    D+LC P   C  C      F     Y           ++
Sbjct: 502 SKLGKQQHVTYGKPAPQHVDLDELCAPHETCAACPVLRCTFTDVAEYL----------NI 551

Query: 534 KPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGN 593
           +PL NV+  GLP R  D  + AVGKPV   +           +D  +G+WM D   + G 
Sbjct: 552 QPLKNVNFTGLPLRLADGVIEAVGKPVLKGT-----------MDDHYGSWMHDTK-SDGY 599

Query: 594 SEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNS 653
            EK W+T  ++ + + EY+ KD FK  + S+   L  PFQGN HVV+N SF+Y+    +S
Sbjct: 600 PEKLWVTRKNETSFIFEYESKDHFKHGS-SYPIKLPYPFQGNGHVVYNKSFFYNPINRSS 658

Query: 654 IVQFDLGS------SKIINIVNLST----VDPNIKLY--KTGYNVMDFSLDENGLWVIYG 701
           I +F+L S       K  +   L      V+    LY     +N +DF++DENGLW+IYG
Sbjct: 659 IFRFNLHSISDQVCGKEFSRCELHLPGLLVNTRNYLYTPNHNFNYVDFNVDENGLWIIYG 718

Query: 702 LSNNNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDL 761
           L +NNT V K+D   + IQ+ WNI++ + K G+MF+  GVLY V SVT+    IR A DL
Sbjct: 719 LPSNNTIVIKMDATNMNIQHAWNISIDNHKFGEMFIAGGVLYAVHSVTEETMKIRLAFDL 778

Query: 762 YKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYH 808
           YKN  + V L+FTNP+  TT ++YN + K+LYTW++GN L YPI+Y 
Sbjct: 779 YKNVTIPVHLSFTNPYHKTTAVSYNHKTKELYTWNKGNQLAYPIKYQ 825


>gi|340727501|ref|XP_003402081.1| PREDICTED: hypothetical protein LOC100648727 isoform 2 [Bombus
           terrestris]
          Length = 870

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 289/767 (37%), Positives = 402/767 (52%), Gaps = 104/767 (13%)

Query: 85  WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
           WVWLNA +R+ L A++ FC S+ +YCPPGL                         GAPG 
Sbjct: 146 WVWLNADTRVQLDAIENFCRSSMKYCPPGL------------------------PGAPGS 181

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            G PG  G+PG  G  GPKG  G  GP G  G +G  GP G          DGRDG+PGE
Sbjct: 182 PGAPGEPGLPGLRGMTGPKGPPGLTGPPGPRGPKGDIGPAG---------FDGRDGIPGE 232

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---NGTNGEKGMTGPRGNRGKSG------- 254
           PGLDGIPGR+G DG+ G +G PG +G PG    NGT+G  G  GP+G  G  G       
Sbjct: 233 PGLDGIPGRSGTDGLSGMNGKPGLNGSPGRPGRNGTDGRPGQMGPQGPIGPRGEMGPPGR 292

Query: 255 --INGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEH----IFSSSPIVVREGDN 308
               G  G P I A+K      + +   + LLIPP+I+        + S+  I + EG N
Sbjct: 293 PGSPGQDGRPGITAWKVN----MNDYNINDLLIPPSILDDRMLPSTVNSTGLISIYEGTN 348

Query: 309 VRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN- 367
           +RL+C A+G P+P++ W  S+   I +GSW  ++V   T N + +NR +MG Y+C+ADN 
Sbjct: 349 LRLKCAASGKPEPTVQWFRSDGGVIPIGSWHVTSVIGHTFNISIVNREHMGEYICVADNG 408

Query: 368 --------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEH 413
                          PP I IRN+ +      T  LECEVEAFP  + YWE  D  L   
Sbjct: 409 IPPRALKRIKLQVKFPPFIRIRNQMIRARSQSTVVLECEVEAFPEPIVYWEREDRRLKMS 468

Query: 414 DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPV 473
           +  +  + D  + +Y+  M+L I+ +  +D+ TY C+ KN++D  KGS  + +       
Sbjct: 469 EKYRLEVYD-RRDTYKLKMRLKIAKITSADYGTYHCVVKNDIDTTKGSFTVDDDAKSMEK 527

Query: 474 PTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDV 533
               +Q+ VT    AP+    D+LC P   C  C      F     Y           ++
Sbjct: 528 SKLGKQQHVTYGKPAPQHVDLDELCAPHETCAACPVLRCTFTDVAEYL----------NI 577

Query: 534 KPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGN 593
           +PL NV+  GLP R  D  + AVGKPV   +           +D  +G+WM D   + G 
Sbjct: 578 QPLKNVNFTGLPLRLADGVIEAVGKPVLKGT-----------MDDHYGSWMHDTK-SDGY 625

Query: 594 SEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNS 653
            EK W+T  ++ + + EY  KD FK    S+   L  PFQGN HVV+N SF+Y+    +S
Sbjct: 626 PEKLWVTRKNETSFIFEYDSKDHFKH-GSSYPIKLPYPFQGNGHVVYNKSFFYNPINRSS 684

Query: 654 IVQFDL--------GSSKIINIVNLSTVDPNIKLY----KTGYNVMDFSLDENGLWVIYG 701
           I +F+L        G       ++L  +  N + Y       +N +DF++DENGLW+IYG
Sbjct: 685 IFRFNLHSISDQVCGKESSRCELHLPGLLVNTRNYLYTPNHNFNYVDFNVDENGLWIIYG 744

Query: 702 LSNNNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDL 761
           L +NNT V K+D   + IQ+ WNI++ + K G+MF+  GVLY V SVT+    IR A DL
Sbjct: 745 LPSNNTIVIKMDATNMNIQHAWNISIDNHKFGEMFIAGGVLYAVHSVTEETMKIRLAFDL 804

Query: 762 YKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYH 808
           YKN  + V L+FTNP+  TT ++YN + K+LYTW++GN L YPI+Y 
Sbjct: 805 YKNVTIPVHLSFTNPYHKTTAVSYNHKTKELYTWNKGNQLAYPIKYQ 851


>gi|383858047|ref|XP_003704514.1| PREDICTED: uncharacterized protein LOC100878969 [Megachile
           rotundata]
          Length = 829

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 290/778 (37%), Positives = 404/778 (51%), Gaps = 118/778 (15%)

Query: 85  WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
           WVWLNA +R+ + A++ FC S+ +YCPPGL                         GAPG 
Sbjct: 119 WVWLNADTRVQVDAIENFCRSSMKYCPPGL------------------------PGAPGS 154

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            G PG  G+PG +G  GPKG  G  GP G  G +G  GP G          DGRDG+PGE
Sbjct: 155 PGAPGEPGLPGLQGMTGPKGPPGLTGPPGPRGPKGDIGPSG---------FDGRDGVPGE 205

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING------- 257
           PGLDGIPGR+G+DG+PG +G PG +G PG  G NG  G  G  G +G  G  G       
Sbjct: 206 PGLDGIPGRSGLDGLPGINGKPGLNGSPGRPGRNGTDGRPGQMGPQGPPGPRGEVGPPGR 265

Query: 258 -----VPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHI----FSSSPIVVREGDN 308
                  G P I A+K      + +   + LLIPP+I+    +     S+  I V EG N
Sbjct: 266 PGLPGQDGRPGITAWKVN----MNDHNINDLLIPPSILDDRMLPATLNSTGLISVYEGIN 321

Query: 309 VRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN- 367
           +RLRC A+G P+P + W  S+   I +GSW  ++    T N + +NR +MG Y C+ADN 
Sbjct: 322 LRLRCAASGKPQPVVQWFRSDGAVIPIGSWHVTSAIGPTFNISVVNREHMGEYTCVADNG 381

Query: 368 VPPQ--------------ILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEH 413
           VPPQ              I IRN+ + V    TA LECEVEA+P  +  WE  DG  ++ 
Sbjct: 382 VPPQAFKKFKLQVKFPPFIRIRNQMIRVRSQSTAVLECEVEAYPEPIVSWEREDGRRLKM 441

Query: 414 DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPV 473
              KY              +L I+ + ++D   Y C+ KN++D  KGS I+ +       
Sbjct: 442 SSDKY--------------RLEITKITLADHGIYYCVVKNDIDTTKGSFIVDDDIKNMEK 487

Query: 474 PTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDV 533
               +Q+ VT    AP+    ++LC P   C  C      F     Y           ++
Sbjct: 488 LKIGKQQHVTYGKPAPQNIDLEELCAPHETCSACPVLRCTFTDVAEYL----------NI 537

Query: 534 KPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGN 593
           +PL NV+  GLP R  D  +  VGKPV   +           +D  +G+WM D   + G 
Sbjct: 538 QPLKNVNFTGLPPRLADGVIEVVGKPVLKGT-----------MDDHYGSWMHDMARSDGY 586

Query: 594 SEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNS 653
            +K W+T  ++ + + EYK K+ FK +  S+   L  PFQGN H+V+N SF+Y+    +S
Sbjct: 587 PDKLWVTRKNESSFIFEYKSKEHFK-NTSSYPIALPYPFQGNGHIVYNRSFFYNPINRSS 645

Query: 654 IVQFDLGS--SKIINI------VNLSTVDPNIKLY----KTGYNVMDFSLDENGLWVIYG 701
           + +F+L S    I +       ++L  +  N + Y       +N +DF++DENGLWVIYG
Sbjct: 646 VFRFNLHSLSDHICDKEFARCELHLPGLLVNTRNYLYTPNHNFNYIDFNVDENGLWVIYG 705

Query: 702 LSNNNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDL 761
           L +NNT V KLD   + IQ+ WNI++ + K G+MF+  GVLY V SVT+    I  A DL
Sbjct: 706 LPSNNTVVVKLDANNMNIQHAWNISIDNHKFGEMFIAGGVLYAVHSVTEETMKIGLAFDL 765

Query: 762 YKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHEIDSYNLNKQE 819
           YKN  + V L+FTNP+  TT +TYN + K+LYTW++GN L YPI+Y      N+ K+E
Sbjct: 766 YKNITIPVHLSFTNPYHKTTAVTYNHKTKELYTWNKGNQLAYPIKYQGFT--NVTKEE 821


>gi|307174644|gb|EFN65043.1| Olfactomedin-like protein 2A [Camponotus floridanus]
          Length = 836

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 260/672 (38%), Positives = 369/672 (54%), Gaps = 72/672 (10%)

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           RGPKGD+G PG    DGRDG+PGEPGLDGIPGR+GMDG PG +G PG +G PG+ G NG 
Sbjct: 188 RGPKGDIGPPG---FDGRDGVPGEPGLDGIPGRSGMDGTPGTNGKPGMNGSPGSPGRNGT 244

Query: 241 KGMTGPR------------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPT 288
            G  G              G  G+ GI G  GTP I AYK          E+  +LIPP+
Sbjct: 245 DGRPGQMGPQGPPGPRGDVGPVGRPGIPGKDGTPGIQAYKVNINDHHGIQES--ILIPPS 302

Query: 289 IVGSEHIFSSSPIV-VREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASST 347
           IV      ++S ++ V+EG+N+RLRC A+G P+P I W   +   I +G+W  S++   T
Sbjct: 303 IVEIVPSLNASDVISVQEGNNIRLRCAASGKPQPVIQWTKIDGSTIPMGTWHVSSIMGHT 362

Query: 348 LNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTATLECE 392
            N + I R +MG Y+C A+N                PP I IRN+ V V     A LECE
Sbjct: 363 FNISVITREHMGDYVCNANNGISPASSKKFRLQVRFPPFIRIRNKVVIVRNQNPAMLECE 422

Query: 393 VEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDK-GSYQYIMQLNISNVNISDFDTYRCIS 451
           VEAFP  V +WE  DG  ++    KY     D+  +Y+  M+L I+ V  SD  TY C++
Sbjct: 423 VEAFPEPVVHWERGDGRRLKMSD-KYRTEVYDRRDNYKLKMKLRITRVTSSDHGTYYCVA 481

Query: 452 KNEVDIAKGSLILFES-NAKTPVPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQ 510
           KNE+DI KG+ I+ +   +   +    +Q     +   P  + + +LC PQ  C  C   
Sbjct: 482 KNELDITKGTFIVNDDLKSAEKLKLGNDQHVTYGHPMPPSVDQEQELCSPQETCTTCP-- 539

Query: 511 NKEFNCKEGYFAYDLLGRRDFDVKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKE 570
                C      Y  +      V PL  +++  +P    +  + AVGKPV   S      
Sbjct: 540 ----KC-----TYAGILDAHVHVYPLRGINTTRIPQLLAEGMIEAVGKPVLKGS------ 584

Query: 571 SSGKPVDVIFGAWMKDP---HPTSGNSEKFWMTTDS--DPTHLNEYKDKDMFKSDAKSWT 625
                +D  +G+WM D    HP    S+K ++T ++  D +++ E+K K+ FK+D     
Sbjct: 585 -----MDDYYGSWMHDAFSRHPHDVMSDKLFVTRNNTRDMSYIYEFKSKEHFKNDT-GLP 638

Query: 626 YNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSKIIN--IVNLSTVDPNIK----- 678
             L   FQGN HVV+N SF+Y+ +   ++ +FDL S    N   VN     P ++     
Sbjct: 639 IKLPYAFQGNGHVVYNKSFFYNPQNRATVFRFDLYSESDCNRHFVNCEIELPGLQVNTKN 698

Query: 679 -LYKTGYNVMDFSLDENGLWVIYGLSNNNTAVTKLDTATLQIQYTWNITLLHKKVGDMFV 737
            LY   +  +DF++DENGLWVIYGL++NNT V K+D   + IQY WNI++ H + G+MF+
Sbjct: 699 YLYTHNFTYVDFNVDENGLWVIYGLASNNTVVVKIDPVKMMIQYAWNISIDHHRFGEMFI 758

Query: 738 VCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDR 797
             GVLY + SVT+    IRFA DL +N + +VSL+FTNP+  TT ++YN + K+LYTW++
Sbjct: 759 AGGVLYAIHSVTEETMKIRFAFDLSRNTIRDVSLSFTNPYHKTTAVSYNHKTKELYTWNK 818

Query: 798 GNSLTYPIRYHE 809
           GN L YP++Y +
Sbjct: 819 GNQLAYPVKYRD 830


>gi|307206578|gb|EFN84578.1| Gliomedin [Harpegnathos saltator]
          Length = 814

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 252/663 (38%), Positives = 359/663 (54%), Gaps = 86/663 (12%)

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG---IPGTNGTNG- 239
           KGD+G PG    DGRDG+PGEPGLDGIPGR+G+DG+PG +G PG +G   +PG NGT+G 
Sbjct: 191 KGDIGPPG---FDGRDGIPGEPGLDGIPGRSGLDGVPGSNGKPGVNGSPGLPGRNGTDGR 247

Query: 240 --EKGMTGPRGNRG------KSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVG 291
             + G+ GP G RG      ++G  G  G P + A+K  +         + +LIPP+IV 
Sbjct: 248 PGQMGLQGPPGQRGDQGPQGRTGPPGRDGEPGVQAWKVNNND---YVNVNDVLIPPSIVE 304

Query: 292 SEHIFSSSPIV-VREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNF 350
                ++S ++ V+EG NVRLRC ++G P+P I W +     I +G+W  S++   T N 
Sbjct: 305 ITPPLNASDVISVQEGSNVRLRCASSGKPQPVIQW-SRIGSVIPMGAWHVSSITGHTFNI 363

Query: 351 TRINRINMGAYMCLADN-VPPQ--------------ILIRNRRVGVPIGRTATLECEVEA 395
           + +NR +MG Y C ADN +PP               I IRN+ + V     ATLECEVEA
Sbjct: 364 SVVNRDHMGEYACNADNGIPPARSKRFRLQVRFAPFIRIRNQMILVRNQNPATLECEVEA 423

Query: 396 FPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEV 455
           FP    +WE         DG +               +L I  V  +D  +Y C++KN++
Sbjct: 424 FPEPAVHWE--------RDGRRLKT------------RLRIMRVTSADHGSYHCVAKNDI 463

Query: 456 DIAKGSLILFESNAKTPVPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFN 515
           D  KGS ++ +           +Q+ VT     P    Q++LC PQ  C  C        
Sbjct: 464 DTIKGSFMVDDDTKNIERLKLGKQQHVTYGEPMPASVDQEELCSPQETCAACP----VLK 519

Query: 516 CKEGYFAYDLLGRRDFDVKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKP 575
           C     AY  +      V+PL  V+  GLP    D  + AVGKPV   S           
Sbjct: 520 C-----AYTDIADH-MHVQPLRGVNFTGLPPSFADGMIEAVGKPVLKGS----------- 562

Query: 576 VDVIFGAWMKDPHPTSGNS-EKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQG 634
           +D  +G+WM D      ++ ++ W+T  +D +++ EY+ KD FK+D       L  PFQG
Sbjct: 563 MDDYYGSWMHDAAFRHDSTPDRLWVTRKNDTSYIFEYRSKDYFKNDTGR-RIKLPHPFQG 621

Query: 635 NAHVVFNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKTGY--------NV 686
           N H+V+N SF+Y+ +  ++I +FDL SS            P + L    +        N 
Sbjct: 622 NGHIVYNRSFFYNPQNRSTIFRFDLYSSSEQGCDECEIPLPGLLLNTQNFLYTPYHNFNY 681

Query: 687 MDFSLDENGLWVIYGLSNNNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVD 746
           +DF++DENGLWVIYGL +NNT V K+D   + IQY WNI++ H + G+MF+  GVLY V 
Sbjct: 682 VDFNMDENGLWVIYGLPSNNTVVAKIDPVKMVIQYAWNISIDHHRFGEMFIAGGVLYAVH 741

Query: 747 SVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR 806
           SVT+    IRFA DLY+N  L+V L+FTNP+  TT ++YN + K+LYTW++GN L YP++
Sbjct: 742 SVTEETMKIRFAFDLYRNATLDVHLSFTNPYHKTTAVSYNHKTKELYTWNKGNQLAYPVK 801

Query: 807 YHE 809
           Y +
Sbjct: 802 YRD 804


>gi|156554469|ref|XP_001604389.1| PREDICTED: hypothetical protein LOC100120786 [Nasonia vitripennis]
          Length = 832

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 285/814 (35%), Positives = 393/814 (48%), Gaps = 124/814 (15%)

Query: 49  DNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKE 108
           DN+V +     F   D+ + ++ER   Q      N  +WL   + I    +Q  C  T E
Sbjct: 69  DNAVSEV----FRSRDVKDTLKER---QSAPLKGNDRLWLPGDTYISSDFIQKMCRETAE 121

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           YCPPG                                      G+PG  G  GPKGD G 
Sbjct: 122 YCPPGTP------------------------------------GMPGSNGFPGPKGDQGL 145

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG QG PG  G RGP G  G  G  GLDG DG+PGEPGLDG+PGR+G DG+PG+DG PG 
Sbjct: 146 PGIQGSPGIPGPRGPPGPEGLRGGPGLDGIDGIPGEPGLDGLPGRSGNDGVPGQDGKPGL 205

Query: 229 DGIPGTNGTNG---------------------EKGMTGPRGNRGKSGINGVPGTPAICAY 267
           +G PG  G NG                     + G+ GP G  G+ G +G PG P I +Y
Sbjct: 206 NGTPGAPGRNGTDGRNGLPGAQGPQGPPGTPGKMGLRGPPGQDGRPGQDGSPGLPGIVSY 265

Query: 268 K--RESCSLLPNSETSQLLIPPTIVGSEHIFSS-SPIVVREGDNVRLRCVATGHPKPSII 324
              R + S L    T+ LL+PP+I  S  I      ++  EG NVRL C A+G P P + 
Sbjct: 266 APLRGNGSAL-KVNTNDLLVPPSIASSGDIRGQYVTLMAEEGLNVRLECFASGKPTPIVQ 324

Query: 325 WKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNVPPQILIRNRRVGVPIG 384
           W   + + I  G W  SAV  S LN + ++R + G Y C ADN  P    +   +GV  G
Sbjct: 325 WHRPDGQLIHTGFWYASAVYGSPLNLSSVHRDDWGNYTCTADNGIPPSATKQYMLGVKFG 384

Query: 385 ---------------RTATLECEVEAFPLSVR-YWEFIDGTLIEHDGVKYSIS-DVDKGS 427
                              LECEVE+FP     YWEF D  +   D  + +I  D  K  
Sbjct: 385 PLIRIRSPLVRARNHGMVVLECEVESFPKPEHFYWEFRDSRVENKDKHRMTIQEDEYKRD 444

Query: 428 YQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPVPTEKEQEEVTVYNR 487
           Y++ M+L IS +  SD+  Y C  K   ++ KG + + + N KT   T  E + V ++ +
Sbjct: 445 YKFKMRLKISKITSSDYGNYYCAVKKNYNVTKGVVTVRDVNDKT--ATSSESKGVAIFGK 502

Query: 488 APKPEGQ-DDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKPLGNVSSKGLPN 546
            P P  Q  +LCPPQ+ C  C   N               G +D + KP+  ++  GLP 
Sbjct: 503 PPPPRPQFRNLCPPQLNCDSCPRAN--------------CGYQDVEAKPMTGINFPGLPP 548

Query: 547 RTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSE-KFWMTTDSDP 605
           R  D  + AVGKPVF              +D ++G WM+D  P S ++  K W+T  +D 
Sbjct: 549 RVADGVIGAVGKPVFKGQ-----------MDDLYGIWMQDASPKSQSTAGKLWVTRSTDT 597

Query: 606 THLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSK-- 663
           +H+ EY D D +       +  L   FQGN H+V +  F+Y+    +SIV+ DL  ++  
Sbjct: 598 SHVFEYADIDDYAQKKSPRSIKLPYNFQGNGHLVNDGYFFYNPYNRSSIVRLDLTHNEGT 657

Query: 664 IINIVNLSTVDPNIKLYKTGY--------NVMDFSLDENGLWVIYGLSNNNTAVTKLDTA 715
           I     L    P +++    Y        N +DF +DENGLW IYG  +N+T V K+D  
Sbjct: 658 IYAFGRLEMELPGLRVNTGNYLYTPNHNFNYVDFDVDENGLWAIYGTPSNSTVVMKVDPD 717

Query: 716 TLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTN 775
           T+  QY W+I++ H K G+MFV  GVLY V S+TD   NI  A+DLY+   L V+L+F N
Sbjct: 718 TMTPQYAWSISVDHHKYGEMFVSRGVLYAVHSITDATMNISLAIDLYQGKHLNVNLSFLN 777

Query: 776 PFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
            +   TM+ YN++ K+LY WD    L Y   + +
Sbjct: 778 AYKKVTMLRYNNKTKELYAWDNSTLLAYQFLFKD 811


>gi|332020940|gb|EGI61334.1| Olfactomedin-like protein 2A [Acromyrmex echinatior]
          Length = 1273

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 281/756 (37%), Positives = 393/756 (51%), Gaps = 102/756 (13%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            A++ FC S+ +YC              G  G  G  G  GE+G PGV         PG E
Sbjct: 548  AIENFCRSSAKYC------------PPGLPGAPGNPGPPGEQGLPGV---------PGME 586

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G RGP G  G+PG +G+ GD G  G  G  G PG  GLDG   +PG  GLDG+PG NG  
Sbjct: 587  GLRGPPGQPGHPGARGLKGDIGPPGFDGRDGVPGEPGLDG---IPGRSGLDGVPGSNGK- 642

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG------KSGINGVPGTPAICAYKRES 271
              PG +GLPG  G  GT+G  G+ G  GP G+RG        G  G  G   I AYK   
Sbjct: 643  --PGANGLPGSPGRNGTDGRPGQMGPQGPPGSRGDIGPPGHPGAPGKDGKSGIQAYKIN- 699

Query: 272  CSLLPNSETSQLLIPPTIVG-SEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN 330
               + +   + +LIPP+IV  +  + SS  I V+EG  +RLRC A+G P+P I W   + 
Sbjct: 700  ---MNDYNENDILIPPSIVEITSSLNSSGVISVQEGSKIRLRCAASGKPQPVIQWTKIDG 756

Query: 331  KPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN-VPPQ--------------ILIR 375
              I +G W  S+V   T N + +NR +MG Y+C ADN +PP               I IR
Sbjct: 757  SMIPMGPWHVSSVTGHTFNISLVNREHMGDYVCNADNGIPPARFKRFKLQVKFAPFIRIR 816

Query: 376  NRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVD-KGSYQYIMQL 434
            N+ V V     ATLECEVE FP  V YWE  DG  ++    KY     D + +Y+  M+L
Sbjct: 817  NQVVLVRNQNPATLECEVEGFPEPVVYWERSDGRRLKMSD-KYRTEVYDRRDNYKLKMKL 875

Query: 435  NISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPVPTEKEQEEVTVYNRAPKPEGQ 494
             I+ V  SD  TY C++KN+ D  KGS I+ +           ++E VT  +  P    Q
Sbjct: 876  RIARVTTSDHGTYHCVAKNDFDTVKGSFIVDDDIKDVEKYKSGKEEHVTYGHPMPMSVDQ 935

Query: 495  D-DLCPPQ----VLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKPLGNVSSKGLPNRTL 549
            + +LC P       CP C+               D++      V+PL +++    P R+ 
Sbjct: 936  EQELCIPTQETCTTCPKCT-------------YTDIIDH--LHVQPLSDINITRPPPRST 980

Query: 550  DCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEKFWMTTDSDPTHLN 609
            +  + A+GKPV   +           +D  +G+WM D        ++ W+T  +D +++ 
Sbjct: 981  EGFIEAIGKPVLKGN-----------MDDHYGSWMHDA-SNDIMPDRLWVTRHNDTSYIY 1028

Query: 610  EYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDL-GSSKIINIV 668
            EYK K+ FK++       L  PFQGN HVV++ SF+Y+     +++++DL  SS      
Sbjct: 1029 EYKSKEDFKNNTALNEIKLPHPFQGNGHVVYDKSFFYNPINRPTVLRYDLYASSDHQRCK 1088

Query: 669  NLS----------TVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSNN----NTAVTKLDT 714
             LS           +D    LY   +   DF++DENGLWVIY LS N    NT V K+D 
Sbjct: 1089 QLSPECEMQLPCLEIDGQNYLYTRNFTYTDFNVDENGLWVIYPLSPNCSGKNTVVVKMDP 1148

Query: 715  ATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFT 774
              + IQY WNI++ H++ G+MF+  GVLY + SVTD    IRFA DLYKN  L+V+L+FT
Sbjct: 1149 TKMIIQYAWNISIDHRRFGEMFIAGGVLYAIRSVTDDTMEIRFAFDLYKNTTLDVNLSFT 1208

Query: 775  NPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHEI 810
            NP+  TT ++YN + K+LYTW++GN L YP+++ E+
Sbjct: 1209 NPYHKTTAVSYNHKTKELYTWNKGNRLAYPVKWQEV 1244


>gi|241669334|ref|XP_002411399.1| colmedin, putative [Ixodes scapularis]
 gi|215504031|gb|EEC13525.1| colmedin, putative [Ixodes scapularis]
          Length = 707

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 269/756 (35%), Positives = 387/756 (51%), Gaps = 96/756 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++ FC ++KEYC PG                     + G  G PGV G PG +G   D 
Sbjct: 3   VLEEFCFTSKEYCGPG---------------------DPGHPGKPGVPGYPGQKG---DM 38

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G RG  G  G PGP+G  G +G++G  G  G PG  GLDGRDGLPG PGLDGIPG  G D
Sbjct: 39  GFRGLPGIPGSPGPEGPIGPKGQKGDTGGPGEPGAPGLDGRDGLPGPPGLDGIPGPQGPD 98

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKG----------------MTGPRGNRGKSGINGVPGT 261
           G  GKDG+ G +G+PG NGT+G  G                + G RG RG  GI G PG 
Sbjct: 99  GPRGKDGVDGTNGLPGVNGTDGVNGASCCSSIPPPPFPAKCLPGSRGKRGLPGIPGTPGI 158

Query: 262 PAICAYKRESCSLLPNSETSQLL-------IPPTIVGSEHIFSSSPIVVREGDNVRLRCV 314
           P I A+  E  S +P ++T QLL       +PP+IVGS+ + +     V EG N +L C 
Sbjct: 159 PGINAWTVE--SKIP-TDTEQLLSKLRTINVPPSIVGSDTVQT---FHVEEGKNFQLTCS 212

Query: 315 ATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN-VPPQ-- 371
           ATG P+P + W+ ++   I    W +S V    LN TRI+R  MG Y+C+A N +PP   
Sbjct: 213 ATGQPRPVVTWRRTDGAAIYGNRWHESYVEDRVLNLTRISREEMGGYVCIASNGIPPTAR 272

Query: 372 ------------ILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYS 419
                       I I+   VG  IG  A LEC VEAFP +V  W    G LIEH   K+ 
Sbjct: 273 MDVSLEVRFAPFIRIKQWAVGTEIGGWALLECVVEAFPPAVNTWMTGTGRLIEHS-PKHE 331

Query: 420 ISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPV-PTEKE 478
           I +V++G Y+ +M LNISN+   D   Y C+S+N    A G L ++  + +T   P ++ 
Sbjct: 332 IKEVEEG-YKALMTLNISNIESEDLGYYSCVSRNLRGQASGQLSVYGDSMRTAAGPLDQN 390

Query: 479 QEEVTVYNRAPKPEGQDDLC-PPQVLCPPCSDQNKEFNCKEGYFAYDLLG-RRDFDVKPL 536
              VT+ N     E +         +    ++Q  +++       Y+ L   +    K  
Sbjct: 391 GPWVTILNDRRNVEKEKKRADAAGSMGQATNNQLAKWHIH--ICIYNALNCCKPLRKKYA 448

Query: 537 GNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEK 596
            +++   +  R++      VGKPV ++ ++ +           +  WM+D    S   + 
Sbjct: 449 ADIAECLMTRRSIQ----RVGKPVLYRQSTSR-----------WTNWMRDSE--SLGPDV 491

Query: 597 FWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQ 656
           F++    D T L E+  K  F++ +      L  P  GNA VV+N SFYYH+  +N IV+
Sbjct: 492 FYVANGEDRTALLEFPSKAAFRNGSDPRILKLPTPAHGNAQVVYNGSFYYHQNDTNQIVR 551

Query: 657 FDLG--SSKIINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIY-GLSNNNTAVTKLD 713
             L       + + +++  + +        N ++   DENGLW+IY    +NNT V K+D
Sbjct: 552 VALSGPGRGRLGLEDVAFRNDSYLYTNQAGNYVNILADENGLWIIYSSRRSNNTMVLKVD 611

Query: 714 TATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLE-VSLN 772
             + + ++ WN+TL H+KVG +FVVCGVLY ++S+T+  T + FA DLY   LLE V LN
Sbjct: 612 EQSFRPEFIWNLTLDHRKVGKLFVVCGVLYGINSLTEHRTELGFAYDLYTESLLEGVRLN 671

Query: 773 FTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYH 808
           F+NPF NTT ++YN     LY+ D  + L YP+ ++
Sbjct: 672 FSNPFGNTTFLSYNPGDGSLYSTDDQHQLLYPLLFN 707


>gi|312385533|gb|EFR30010.1| hypothetical protein AND_00667 [Anopheles darlingi]
          Length = 551

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 204/474 (43%), Positives = 288/474 (60%), Gaps = 33/474 (6%)

Query: 428 YQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPVPTEKEQEEVTVY-N 486
           Y+ +M+LNI+N+  SDF  Y C++KNE+ + +    L E +     P      +++VY  
Sbjct: 38  YKSVMRLNITNIRPSDFGEYHCVAKNELGMTEAEFHLMEHSPFIIRP--PGSTDISVYGT 95

Query: 487 RAPKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFA-YDLLGRRDFDVKPLGNVSSKGLP 545
           + P+ E  +D+C P   CP C D  ++F CK+   + YDL+G  + ++KP+GN+S  GLP
Sbjct: 96  KPPEKESYEDICGPPTTCPECPDP-RDFKCKDTIVSLYDLVG--NLEIKPIGNISYTGLP 152

Query: 546 NRTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEK-FWMTTDSD 604
           NRT DC +YAVGKPV+HK T           + ++GAW+KDP   +   EK  W T ++D
Sbjct: 153 NRTTDCVLYAVGKPVYHKYT-----------EQMYGAWLKDPAARNDALEKKVWATREND 201

Query: 605 PTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSK- 663
              L E+ +K  ++++  + TY L+ PF+GNAHVV+N SFYY+++ S  I+++DL   + 
Sbjct: 202 TNRLFEFANKTTYRNNVATKTYRLERPFRGNAHVVYNGSFYYNERNSPRIIKYDLNVERQ 261

Query: 664 -IINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGL-SNNNTAVTKLDTATLQIQY 721
             +N +  +T + +  LY T  N MDF++D+NGLWVIYG   +NNT V KL+   L +QY
Sbjct: 262 TAMNELEGATTNGSNFLYTTEINYMDFNVDDNGLWVIYGTPDSNNTMVVKLNENNLTVQY 321

Query: 722 TWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTT 781
            WNI++ H KVG+MF+VCGVLY +DSVT+RNT IR ALDLY + LL+VSL FTNPF  TT
Sbjct: 322 GWNISVNHHKVGEMFIVCGVLYAIDSVTERNTKIRLALDLYHSKLLDVSLAFTNPFRKTT 381

Query: 782 MITYNSRYKDLYTWDRGNSLTYPIRYHEIDSYNLNKQEKTD----ADMTTGVDITPTQPP 837
            + YN + K+LYTWDRGN LTYPIRYHEI  YN    EK D      M TG DI      
Sbjct: 382 TVGYNFKNKELYTWDRGNQLTYPIRYHEI-GYNTTATEKADDGLSPQMQTGYDIFNDHDA 440

Query: 838 LIPDSTYSFIRLTFQDLYTWDRGNSLTYPIRYHEIDSYNLNKQEKTDADMTTGV 891
              DS   F +  +Q L   +R   L + + +    S  L +  +    MT GV
Sbjct: 441 ETEDSVGHFDK--WQSLPVLNRHRLLRWIVEF----SARLTRMVEMVRRMTFGV 488


>gi|391342834|ref|XP_003745720.1| PREDICTED: uncharacterized protein LOC100902465 [Metaseiulus
           occidentalis]
          Length = 846

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 239/736 (32%), Positives = 340/736 (46%), Gaps = 135/736 (18%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           ++ E+  + E   +G +GEKG               +  +R    D+   GP G+PG   
Sbjct: 174 RRREVRDEAECSCRGPKGEKGE--AAESFSKHRYHSNSLRRRRLSDISLIGPPGLPGT-- 229

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNG 236
               KG+ G PG  GL G+DGLPG+PGLDG+PG  G DG  G+DGL   PG  G PG NG
Sbjct: 230 ----KGEKGEPGNEGLPGQDGLPGQPGLDGMPGTPGRDGTSGRDGLSGLPGLAGRPGRNG 285

Query: 237 TNGEKGMTGPR---------------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
           T+G  G  G R               G +G +G  G PG P I +Y              
Sbjct: 286 TDGTPGEAGQRGPPGPTGEPGPMGPRGRKGAAGNEGQPGLPGITSY-------------- 331

Query: 282 QLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDS 341
                 TI G  +I     ++V                                     S
Sbjct: 332 ------TIGGGTNITDLKDLLV-------------------------------------S 348

Query: 342 AVASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRT 386
           ++  S+LNFT+  R +MG Y+C+A N                 P + I N  V V  G T
Sbjct: 349 SILGSSLNFTQALREHMGHYLCIAANGIAAPDVRRVTVDVTFSPFVKIANWMVSVRDGAT 408

Query: 387 ATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446
           A LEC +EAFP +  YW   D   I HD +KY+I +  +  Y     L ++ V+  DF  
Sbjct: 409 ARLECLIEAFPRASVYWIKGDDEPIIHDDLKYTIEEEFEEPYVLRSSLVVAYVSDKDFAH 468

Query: 447 YRCISKNEVDIAKGSLILFESNAKTPVPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPP 506
           Y+CI++N    A G   +      +      E    T Y   P P   +++CP   +CP 
Sbjct: 469 YKCIARNSRGTATGVFSITPKKPGSKSGDVNELTSFTTYGVPPPPRLVEEVCP---VCPD 525

Query: 507 CSDQNK----EFNCKEGYFAYDLLGRRDFDVKPLGNVSSKG----LPNRTLDCQ----VY 554
           C   ++         E +    +   R+  V  L  V +K     L  R  +C     + 
Sbjct: 526 CPAGHECAPLHGEIPEAHLIPPVATFRN--VVNLETVVNKSHWLHLKPRDQECARRRFLA 583

Query: 555 AVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDK 614
            VGK V  + +S              GAW +D    + NS K ++T   DP  L E+ + 
Sbjct: 584 KVGKAVLIRQSSD-----------FDGAWGRDSFKRTFNSSKAFVTLSVDPNTLLEFVNG 632

Query: 615 DMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDL--GSSKIINIVNLST 672
            +FK       + L  PF+GN+HV++NN F+YH+  + SIV++DL   +S  ++I +++ 
Sbjct: 633 KLFKR------HGLPYPFRGNSHVIYNNVFFYHQLNTRSIVRYDLVNKTSAALDIEDVTF 686

Query: 673 VDPNIKLYKTGYNVMDFSLDENGLWVIYGL-SNNNTAVTKLDTATLQIQYTWNITLLHKK 731
              +  LY T  N +D   DENGLW +Y    + NT V K D  +++++  WN+TL H  
Sbjct: 687 GKSSRHLYATRKNHVDIMADENGLWAVYASDKSTNTMVLKFDETSMKVERVWNLTLDHHA 746

Query: 732 VGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKD 791
           VG+MF+VCGVLY V SVT+  T+I FA DLY    L V+LNFTNP+ NT+MITYN     
Sbjct: 747 VGEMFIVCGVLYGVSSVTEGVTHINFAFDLYLEQSLPVNLNFTNPYRNTSMITYNPAESG 806

Query: 792 LYTWDRGNSLTYPIRY 807
           LYTWD G+ L YP+ +
Sbjct: 807 LYTWDHGHQLFYPLLF 822



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 127/348 (36%), Gaps = 141/348 (40%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPG------------------------DEGK---RGPK 184
           GIPG  G +G +G        G+PG                        DE +   RGPK
Sbjct: 137 GIPGFPGSKGDQGS------PGLPGMSGAPGPIGPPGAPGSGRRRREVRDEAECSCRGPK 190

Query: 185 G----------------------------------------DMGYPGRIGLDGRDGLPGE 204
           G                                        + G PG  GL G+DGLPG+
Sbjct: 191 GEKGEAAESFSKHRYHSNSLRRRRLSDISLIGPPGLPGTKGEKGEPGNEGLPGQDGLPGQ 250

Query: 205 PGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGP--------------- 246
           PGLDG+PG  G DG  G+D   GLPG  G PG NGT+G  G  G                
Sbjct: 251 PGLDGMPGTPGRDGTSGRDGLSGLPGLAGRPGRNGTDGTPGEAGQRGPPGPTGEPGPMGP 310

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGS---------EHI-- 295
           RG +G +G  G PG P I +Y     + +  ++   LL+  +I+GS         EH+  
Sbjct: 311 RGRKGAAGNEGQPGLPGITSYTIGGGTNI--TDLKDLLV-SSILGSSLNFTQALREHMGH 367

Query: 296 --------------------FSSSPIV--------VREGDNVRLRCVATGHPKPSIIWKT 327
                                + SP V        VR+G   RL C+    P+ S+ W  
Sbjct: 368 YLCIAANGIAAPDVRRVTVDVTFSPFVKIANWMVSVRDGATARLECLIEAFPRASVYWIK 427

Query: 328 SENKPITLGSWK--------DSAVASSTLNFTRINRINMGAYMCLADN 367
            +++PI     K        +  V  S+L    ++  +   Y C+A N
Sbjct: 428 GDDEPIIHDDLKYTIEEEFEEPYVLRSSLVVAYVSDKDFAHYKCIARN 475


>gi|391340309|ref|XP_003744485.1| PREDICTED: gliomedin-like [Metaseiulus occidentalis]
          Length = 762

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 227/669 (33%), Positives = 320/669 (47%), Gaps = 99/669 (14%)

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  G  GLDG DG PG+PGLDG  G  G DG  G  G  G+DGIPG++GT+G  G+ G  
Sbjct: 135 GSKGEPGLDGVDGTPGQPGLDGTLGAQGADGPKGDKGEQGEDGIPGSHGTDGVNGIDGVP 194

Query: 248 GNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGD 307
           G +G  G +                            +PP IV S     SS + V EG 
Sbjct: 195 GEKGDKGDS----------------------------VPPEIVLSTE---SSSVEVNEGV 223

Query: 308 NVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367
           ++ L C ATG P PS+ W   + KPI  G+   S+V    LN + + R +MG Y C A N
Sbjct: 224 SLGLVCSATGQPTPSVAWSRIDGKPI-FGNPHVSSVGDKQLNMSLVTRADMGVYACTAAN 282

Query: 368 VPPQILIRNRRVGVPI---------------GRTATLECEVEAFPLSVRYWEFIDGTLI- 411
             P I  R   + V                 G    LEC  EA+P  V +W    G +I 
Sbjct: 283 GVPPIASRTISLNVAFAPLIRIQKWNVASWNGGGVVLECLTEAYPPPVNFWISRSGNIIG 342

Query: 412 ----------EHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGS 461
                         +KY   D    SYQ+ M LNI+ V  SD  +Y C+SKN    A G+
Sbjct: 343 EWNFGFEVNYVESSLKYVPKDEALSSYQHRMTLNITYVTPSDLGSYLCVSKNVRGQAVGT 402

Query: 462 LILFESNA-----KTPVPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCSDQNKEFNC 516
           + L    +       P+      EE T    A   E Q   C  +  CP C  ++     
Sbjct: 403 IDLSSKKSVDGYQNEPLDWRSSSEEATFGTEA--KEKQHAQCLRK--CPECRCKSALPEM 458

Query: 517 KEGYFAYDLLGRRDFDVKPLGNVSSKGLPNRTLDCQVYAVGKPVFHKSTSMKKESSGKPV 576
            +    Y  + +R++  KP  +      P  TLD ++  VGKPV +              
Sbjct: 459 ADVRNEYSDVDKRNWTRKPDRH------PGCTLDSRLSRVGKPVMYLENGTS-------- 504

Query: 577 DVIFGAWMKDP--HPTSGNSEK-FWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQ 633
              + AW +D   HP S N+ + F+ T   D THL  +K +++F++   S    L  PF 
Sbjct: 505 ---YSAWWQDEVYHPDSENATRVFYATKHGDNTHLYMFKTRELFQNGTFSKGIPLISPFH 561

Query: 634 GNAHVVFNNSFYYHKKFSNSIVQ-------FDLGSSKIINIVNLSTVDPNIKLYKTGYNV 686
           GN +++ N +FYYH+  SN+IV+       F+ G   ++ + +++  +    L+    N 
Sbjct: 562 GNGNLLINGTFYYHQNASNNIVRVPLHSRSFEKGEMSVLAVEDMAFSNRTF-LFGQQQNY 620

Query: 687 MDFSLDENGLWVIYGLS-NNNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVV 745
              S DENGLW+IY  + +NNT + K+D  T + Q+ WN+TL HKK+G MF++CGVLY V
Sbjct: 621 AMISADENGLWIIYSSTRSNNTMILKIDEKTFEKQFIWNLTLPHKKIGQMFIMCGVLYAV 680

Query: 746 DSVTDRNTNI-RFALDLYKNDL--LEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLT 802
           +SVT+ N  I  +A DL  + +  LE  + FTNPF NTT +TYN R  +L++ D GN L 
Sbjct: 681 NSVTEPNAQIYMYAYDLLADTIISLEAPIAFTNPFANTTFLTYNPREHELFSTDNGNHLV 740

Query: 803 YPIRYHEID 811
           YP+R  E D
Sbjct: 741 YPVRTLEED 749



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 127/327 (38%), Gaps = 79/327 (24%)

Query: 91  YSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
           Y+ +P+  M  FC  +  YC               ++   G KGE G  G  G  G PG 
Sbjct: 109 YATVPMDVMTRFCKDSSTYC--------------NSEYVRGSKGEPGLDGVDGTPGQPGL 154

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G  G +G  GPKGD G  G  GIPG  G              G++G DG+PGE G  G 
Sbjct: 155 DGTLGAQGADGPKGDKGEQGEDGIPGSHGTD------------GVNGIDGVPGEKGDKG- 201

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTG-PRGNRGKSGINGVP--GTPAI 264
                 D +P +  L  +      N           TG P  +   S I+G P  G P +
Sbjct: 202 ------DSVPPEIVLSTESSSVEVNEGVSLGLVCSATGQPTPSVAWSRIDGKPIFGNPHV 255

Query: 265 CAY--KRESCSLLPNSE------TSQLLIPPTIVGSEHIFSSSPIVVR---------EGD 307
            +   K+ + SL+  ++      T+   +PP    +  +  +   ++R          G 
Sbjct: 256 SSVGDKQLNMSLVTRADMGVYACTAANGVPPIASRTISLNVAFAPLIRIQKWNVASWNGG 315

Query: 308 NVRLRCVATGHPKPSIIWKTSENKPITLGSW-----------------KDSAVAS----S 346
            V L C+   +P P   W +     I  G W                 KD A++S     
Sbjct: 316 GVVLECLTEAYPPPVNFWISRSGNII--GEWNFGFEVNYVESSLKYVPKDEALSSYQHRM 373

Query: 347 TLNFTRINRINMGAYMCLADNVPPQIL 373
           TLN T +   ++G+Y+C++ NV  Q +
Sbjct: 374 TLNITYVTPSDLGSYLCVSKNVRGQAV 400


>gi|357612436|gb|EHJ68002.1| colmedin [Danaus plexippus]
          Length = 624

 Score =  295 bits (755), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 206/598 (34%), Positives = 297/598 (49%), Gaps = 114/598 (19%)

Query: 49  DNSVPQTPHVEFVPPDLYEEIREREKEQQNSTH-------NNPWVWLNAYSRIPLVAMQG 101
           DN+V   PHVEF  P +  E+ E++  +   T        ++ WVWL +YSR+P   +QG
Sbjct: 100 DNTV--APHVEFFNPKMRPELEEKDSIEMKRTGAKGPAPGDDTWVWLTSYSRVPYKVVQG 157

Query: 102 FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
           FC +T++YCPPG+QGP         KG MG  G +G++G+PG  G PG  G  G  G  G
Sbjct: 158 FCKATQDYCPPGVQGP---------KGPMGHPGPKGDRGSPGEAGIPGSPGSVGPFGPPG 208

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---GRDGLPGEPGLDGIPGRNGMDG 218
           PKG+ G+PG  G+ G +G  G  G  G PGR G D   GR G  G PG DGIPG+NG D 
Sbjct: 209 PKGERGFPGNPGLDGRDGVPGEPGLDGLPGRNGADGAPGRYGQDGIPGRDGIPGKNGKD- 267

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
             GKDG  G  G PG  G  GE+G  GP+G +G  G+NG+PG P +  Y          +
Sbjct: 268 --GKDGKVGAQGPPGIRGPKGERGPIGPKGPKGNDGLNGIPGKPGLSIYNY--------T 317

Query: 279 ETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSW 338
           + +Q+ IPP+         +  ++VREGD +RL C   G P+P I W+ ++  PI  GSW
Sbjct: 318 KENQMFIPPSFA-----LDNPRLIVREGDTMRLDCNPKGFPEPIIEWRRADGTPIIQGSW 372

Query: 339 KDSAVASSTLNFTRINRINMGAYMCLAD---------------NVPPQILIRNRRVGVPI 383
           +D++V+   LN   ++R + G Y+CLA+               N  P I + N  V V  
Sbjct: 373 RDASVSGHVLNIPNVSRWHTGKYVCLANNGMQPPANQTTDVEVNFSPYIRVPNNIVYV-F 431

Query: 384 GRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISD 443
            +TA +ECE++A+P  V  WE+ DGT +E    K  ++      +++IM+L I ++N  D
Sbjct: 432 NKTAQIECEIQAWPEPVLAWEYDDGTTVEGSHYKIEVAPTPD-PWRWIMKLEIPHINEHD 490

Query: 444 FDTYRCISKNEVD--IAKGSLILFESNAK-------------TPVPTEKEQEEVTVYNRA 488
              Y C++KNE++    +G + L     K             +P PT    EE+    R 
Sbjct: 491 MRQYICVAKNELNNTTVRGYIRLSHPGPKQQSQIQQQPREFGSPPPTLTSYEELCSAQRC 550

Query: 489 PKPEGQDDLCPPQVLCPPCSDQNKEFNCKEGYFAYDLLGRRDFDVKPLGNVSSKGLPNRT 548
           P              CP C                     R   + P+ N S    P+R 
Sbjct: 551 PS-------------CPRCD--------------------RALMITPM-NASLGNKPHRN 576

Query: 549 LDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEKFWMTTDSDPT 606
            +CQ+YA+GKPV+HK    K+E        +FGAW++D + +     K   T  + P+
Sbjct: 577 TNCQLYAIGKPVYHK---YKEE--------LFGAWLRDSNSSEAQVNKEKETNYTTPS 623


>gi|443703209|gb|ELU00885.1| hypothetical protein CAPTEDRAFT_221151 [Capitella teleta]
          Length = 659

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 99/264 (37%), Positives = 142/264 (53%), Gaps = 17/264 (6%)

Query: 547 RTLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEKFWMTTDSDPT 606
           R  DC++  VGKPVF + T              +G+WM+DP P  G+  K W T      
Sbjct: 406 RNNDCRIRMVGKPVFQRYTG-----------TYWGSWMRDPSPLPGDEHKLWHTRHFSGQ 454

Query: 607 HLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSKIIN 666
            + EY     ++ D K   + + E + G  HVV+  + Y+H+   N IV+++  +  I  
Sbjct: 455 IIYEYNSFSDYRQD-KFKPHKIDERYYGTGHVVYAGALYFHRSGHNEIVKYNFRNESIEA 513

Query: 667 IVNLSTVDPN--IKLYKTGYNVMDFSLDENGLWVIYGLSNN--NTAVTKLDTATLQIQYT 722
             +L          LY T YN  D ++DENGLWVIY  ++    T V+KL+   L I+ T
Sbjct: 514 KRHLKNAAHRGLEYLYHTQYNFFDLAIDENGLWVIYAANDEPEYTLVSKLNPDDLVIEKT 573

Query: 723 WNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLY-KNDLLEVSLNFTNPFTNTT 781
           WNIT+ H++ G+ FV CGVLY++     + T I FA DLY K  +  V L FTNPF    
Sbjct: 574 WNITVKHREYGNGFVTCGVLYLIRDTHAKTTVIDFAYDLYLKEYVSNVRLKFTNPFQMNN 633

Query: 782 MITYNSRYKDLYTWDRGNSLTYPI 805
           M+ YN + K +Y+WD+GN LTYP+
Sbjct: 634 MVAYNPKEKQIYSWDKGNQLTYPL 657



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 78/166 (46%), Gaps = 40/166 (24%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVV---------------------------GPP 148
           G  G KG+ G +G  G KG+RGEKG PG +                           G P
Sbjct: 206 GEPGTKGDGGIEGPRGPKGDRGEKGDPGEIVNKDPGPTRHQRGPPGPPGPVGPPGRDGSP 265

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDE---------GKRGPKGDMGYPGRIGLDGRD 199
           G  GI G +G+RG KG+ G PGP+G  GD            +G KGD G  GR GL G  
Sbjct: 266 GSPGINGTDGRRGRKGNPGEPGPKGDSGDAVNFDPTNCTCTKGQKGDSGEKGRRGLIGFI 325

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           G  GEPG  G PG+ G +     +GL G  GIPG  G  G+KG  G
Sbjct: 326 GYKGEPGETGPPGQPGRN----VEGLRGPPGIPGMRGVKGDKGDPG 367



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 57/118 (48%), Gaps = 5/118 (4%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           + G  G+ G  G  G RG KG PG    PGP+G  GD     P       G +G  G++G
Sbjct: 261 RDGSPGSPGINGTDGRRGRKGNPG---EPGPKGDSGDAVNFDPTNCTCTKGQKGDSGEKG 317

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGE--PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           +RG  G +GY G  G  G  G PG    GL G PG  GM G+ G  G PG   + G N
Sbjct: 318 RRGLIGFIGYKGEPGETGPPGQPGRNVEGLRGPPGIPGMRGVKGDKGDPGGSYVAGAN 375



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQG--IPGDEG-KRGPKGDMGYPGRIGLDGRDGLP 202
           G PG +G  G EG RGPKGD G  G  G  +  D G  R  +G  G PG +G  GRDG P
Sbjct: 206 GEPGTKGDGGIEGPRGPKGDRGEKGDPGEIVNKDPGPTRHQRGPPGPPGPVGPPGRDGSP 265

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDG----IPGTN--GTNGEKGMTGPRGNRGKSGIN 256
           G PG++G  GR G  G PG+ G  G  G       TN   T G+KG +G +G RG  G  
Sbjct: 266 GSPGINGTDGRRGRKGNPGEPGPKGDSGDAVNFDPTNCTCTKGQKGDSGEKGRRGLIGFI 325

Query: 257 GVPGTPA 263
           G  G P 
Sbjct: 326 GYKGEPG 332



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 35/63 (55%), Gaps = 5/63 (7%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRGPKG 164
           C  G +G  G+KG  G  G +G KGE GE G PG     V G  GP GIPG  G +G KG
Sbjct: 305 CTKGQKGDSGEKGRRGLIGFIGYKGEPGETGPPGQPGRNVEGLRGPPGIPGMRGVKGDKG 364

Query: 165 DMG 167
           D G
Sbjct: 365 DPG 367


>gi|241710702|ref|XP_002403466.1| myocilin, putative [Ixodes scapularis]
 gi|215505121|gb|EEC14615.1| myocilin, putative [Ixodes scapularis]
          Length = 203

 Score =  177 bits (449), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 93/207 (44%), Positives = 130/207 (62%), Gaps = 9/207 (4%)

Query: 584 MKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNS 643
           M+D H  + ++ KFW+T D D T L EY D +       S  Y+L   F+GN  VV+N S
Sbjct: 1   MRDSHKRAFDASKFWVTLDGDHTTLLEYVDNNF------SRRYSLPYAFRGNTQVVYNGS 54

Query: 644 FYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKL-YKTGYNVMDFSLDENGLWVIYGL 702
            YYH + ++SIV+ DLG+ K    +NL+    + +L Y T +N MD   DENGLWVIY  
Sbjct: 55  LYYHHENTDSIVRLDLGN-KSTAALNLAEDFSSARLLYATQHNAMDILADENGLWVIYAS 113

Query: 703 S-NNNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDL 761
           S ++NT V K   + ++ +  WN+TL H+ VG+MF+VCGVLY V+SV D  T I FA DL
Sbjct: 114 SGSSNTLVMKFHESAMKTERVWNLTLDHRTVGEMFIVCGVLYAVNSVHDVATRINFAFDL 173

Query: 762 YKNDLLEVSLNFTNPFTNTTMITYNSR 788
           Y+   +E++LNF+NPF NT+  +  SR
Sbjct: 174 YEETAIEMALNFSNPFRNTSXXSEVSR 200


>gi|118601050|ref|NP_001073014.1| colmedin [Strongylocentrotus purpuratus]
 gi|82469998|gb|ABB77241.1| colmedin [Strongylocentrotus purpuratus]
          Length = 794

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 140/269 (52%), Gaps = 11/269 (4%)

Query: 552 QVYAVGKPVFHKSTSMKKESSGKPVDVI---FGAWMKDPHPTSGNSEKFWMTTDSDPTHL 608
           +++ + +P+      +   SS + +  +   +GAWMKD    S + +  W+T       L
Sbjct: 522 KMFKIYEPIVKSQCRLTNISSPREIHAMTRSYGAWMKDTSMDSRHPDMIWVTMHHRGAIL 581

Query: 609 NEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSKII--- 665
            EYK+ D  K    S T+ L   + G  HVV+N SFYYH    + I+++DL +  II   
Sbjct: 582 IEYKNLDEMKRRRLSATFALPFQWDGAGHVVYNGSFYYHHLNKDYIIRYDLTTGSIIERA 641

Query: 666 NIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGL----SNNNTAVTKLDTATLQIQY 721
           ++ +L     ++    +GY  +DF++DENGLW+IY +    S     V+KLD  +L+I  
Sbjct: 642 HVPSLGYASDDLFQLSSGYTNVDFAVDENGLWIIYPVTRPGSVGKLTVSKLDPESLEIIT 701

Query: 722 TWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLE-VSLNFTNPFTNT 780
           T       +   + F+VCGVLY       R + + FA DL++  +LE +S+N  N    T
Sbjct: 702 TITTDHNFESTANAFIVCGVLYTTKGPHSRPSRVDFAFDLFREVVLEDISMNTQNRHRKT 761

Query: 781 TMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
            M++YN R + LY WD+G  LTY +   E
Sbjct: 762 VMLSYNPRDRLLYGWDKGKLLTYDVAIKE 790



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 84/167 (50%), Gaps = 39/167 (23%)

Query: 113 GLQGPIGQKGEIGA---------------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
           GL G  G KGE G+               KG+ G+ G RG KG PG+ G  G  G+PG +
Sbjct: 319 GLTGSTGDKGERGSLIDGEGHILHGPPGPKGDQGISGSRGPKGDPGLDGVDGIMGLPGFK 378

Query: 158 GKRGPK---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ GP+   G++G PGP G+ G +G  GP   MG  G+IG DG+ G  GE          
Sbjct: 379 GEAGPRGILGEVGDPGPMGMKGSKGDMGP---MGTRGQIGYDGQKGRKGE---------- 425

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                    G+ G  G+PG+ G  G KG+ G +G RG+ G  G+ G+
Sbjct: 426 --------TGIMGHRGVPGSTGPFGPKGIKGDQGKRGEVGYPGLTGS 464



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
           IPL ++   CN T   CP G +G   P+G  G+IG +G  G +GE G +G  G  GP G 
Sbjct: 162 IPLSSIANVCNWTNGECPTGPKGNPGPVGLTGQIGQRGLPGPRGEPGVRGKRGDRGPKGQ 221

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
            G  GD G RG KGDMG  GPQG PG +G
Sbjct: 222 AGENGDRGARGEKGDMGLSGPQGPPGIQG 250



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 70/135 (51%), Gaps = 12/135 (8%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------MGYPGPQGIPGDEGKRGPKGDMG 188
           E G KG  G+VG  G  G   D+G+RG   D       G PGP+G  G  G RGPKGD  
Sbjct: 308 EVGPKGDRGLVGLTGSTG---DKGERGSLIDGEGHILHGPPGPKGDQGISGSRGPKGD-- 362

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG  G+DG  GLPG  G  G  G  G  G PG  G+ G  G  G  GT G+ G  G +G
Sbjct: 363 -PGLDGVDGIMGLPGFKGEAGPRGILGEVGDPGPMGMKGSKGDMGPMGTRGQIGYDGQKG 421

Query: 249 NRGKSGINGVPGTPA 263
            +G++GI G  G P 
Sbjct: 422 RKGETGIMGHRGVPG 436



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 6/73 (8%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G   S  +  P G +G IG  G+ G KGE G+ G R   G PG  GP GP+GI GD+GKR
Sbjct: 397 GMKGSKGDMGPMGTRGQIGYDGQKGRKGETGIMGHR---GVPGSTGPFGPKGIKGDQGKR 453

Query: 161 GPKGDMGYPGPQG 173
              G++GYPG  G
Sbjct: 454 ---GEVGYPGLTG 463



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 38/72 (52%)

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           P GP+G PG  G  G  G  G PGP+G PG  GKRG +G  G  G  G  G  G  G+ G
Sbjct: 179 PTGPKGNPGPVGLTGQIGQRGLPGPRGEPGVRGKRGDRGPKGQAGENGDRGARGEKGDMG 238

Query: 207 LDGIPGRNGMDG 218
           L G  G  G+ G
Sbjct: 239 LSGPQGPPGIQG 250



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 42/79 (53%)

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G PG  GL G  G+ G+ G  G+ G+ GK G  G  G  GE G  G RG +G  G++
Sbjct: 181 GPKGNPGPVGLTGQIGQRGLPGPRGEPGVRGKRGDRGPKGQAGENGDRGARGEKGDMGLS 240

Query: 257 GVPGTPAICAYKRESCSLL 275
           G  G P I   + ++CS L
Sbjct: 241 GPQGPPGIQGTQIDNCSCL 259



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 38/72 (52%)

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           P G  G PG +GL G+ G  G PG  G PG  G  G  G  G  G++G  G  G  G+ G
Sbjct: 179 PTGPKGNPGPVGLTGQIGQRGLPGPRGEPGVRGKRGDRGPKGQAGENGDRGARGEKGDMG 238

Query: 243 MTGPRGNRGKSG 254
           ++GP+G  G  G
Sbjct: 239 LSGPQGPPGIQG 250



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           P G  G PGP G+ G  G+RG  G  G P   G+ G+ G  G  G  G  G  G  G  G
Sbjct: 179 PTGPKGNPGPVGLTGQIGQRGLPGPRGEP---GVRGKRGDRGPKGQAGENGDRGARGEKG 235

Query: 222 KDGLPGKDGIPGTNGTN 238
             GL G  G PG  GT 
Sbjct: 236 DMGLSGPQGPPGIQGTQ 252


>gi|224058757|ref|XP_002189135.1| PREDICTED: olfactomedin-like protein 2B [Taeniopygia guttata]
          Length = 858

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ D FK    S +Y L   + G  HVV+
Sbjct: 623 GAWMKDPL---AQEERIYVTNYYYGNTLVEFRNLDNFKQGRWSNSYKLPYSWIGTGHVVY 679

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N SFYY++ F+ +I+++DL    +     L  V  + +      G++ +DF++DENGLWV
Sbjct: 680 NGSFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEESTPWRWRGHSDVDFAVDENGLWV 739

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G +     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 740 IYPAISYEGFNQEVIVLSKLNAADLSTQKETTWRTGLRKNFYGNCFVICGVLYAVDSYNK 799

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N +  TT I YN + + LY WD G+ +TY + +
Sbjct: 800 RNANISYAFDTHTNTQIIPRLLFENEYAYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 856


>gi|363736465|ref|XP_422209.3| PREDICTED: olfactomedin-like 2B [Gallus gallus]
          Length = 738

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ D FK    S +Y L   + G  HVV+
Sbjct: 503 GAWMKDPL---AKEERIYVTNYYYGNTLVEFRNLDNFKQGRWSNSYKLPYSWIGTGHVVY 559

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N SFYY++ F+ +I+++DL    +     L  V  + +      G++ +DF++DENGLWV
Sbjct: 560 NGSFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEESTPWRWRGHSDVDFAVDENGLWV 619

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G +     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 620 IYPAISYEGFNQEVIVLSKLNAADLSTQKETTWRTGLRKNFYGNCFVICGVLYAVDSYNK 679

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N +  TT I YN + + LY WD G+ +TY + +
Sbjct: 680 RNANISYAFDTHTNTQIIPRLLFENEYAYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 736


>gi|326924926|ref|XP_003208673.1| PREDICTED: LOW QUALITY PROTEIN: olfactomedin-like protein 2B-like
           [Meleagris gallopavo]
          Length = 673

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ D FK    S +Y L   + G  HVV+
Sbjct: 438 GAWMKDPL---AREERIYVTNYYYGNTLVEFRNLDNFKQGRWSNSYKLPYSWIGTGHVVY 494

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N SFYY++ F+ +I+++DL    +     L  V  + +      G++ +DF++DENGLWV
Sbjct: 495 NGSFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEESTPWRWRGHSDVDFAVDENGLWV 554

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G +     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 555 IYPAISYEGFNQEVIVLSKLNAADLSTQKETTWRTGLRKNFYGNCFVICGVLYAVDSYNK 614

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N +  TT I YN + + LY WD G+ +TY + +
Sbjct: 615 RNANISYAFDTHTNTQIIPRLLFENEYAYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 671


>gi|355558679|gb|EHH15459.1| hypothetical protein EGK_01549 [Macaca mulatta]
          Length = 794

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 128/237 (54%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 559 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 615

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 616 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 675

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L  K  G+ FV+CGVLY VDS   
Sbjct: 676 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRKFYGNCFVICGVLYAVDSYNQ 735

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 736 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 792


>gi|444730575|gb|ELW70953.1| Olfactomedin-like protein 2B [Tupaia chinensis]
          Length = 1073

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 125/237 (52%), Gaps = 13/237 (5%)

Query: 581  GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
            GAWMKDP       E+ ++T       L E+++ D FK    S +Y L   + G  HVV+
Sbjct: 838  GAWMKDP---LAKDERIYVTIYYYGNTLVEFRNLDNFKQGRWSNSYKLPYSWIGTGHVVY 894

Query: 641  NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
            N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 895  NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 954

Query: 699  IY------GLSNNNTAVTKLDTATLQIQ--YTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
            IY      G S     ++KL+   L +Q   TW   L     G+ FV+CGVLY VDS   
Sbjct: 955  IYPALDEEGFSQEVIVLSKLNAVDLSMQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 1014

Query: 751  RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
            RN NI +A D + N  +   L F N +  TT + YN + + LY WD G+ +TY + +
Sbjct: 1015 RNANISYAFDTHTNTQIVPRLLFENEYAYTTQVDYNPKDRLLYAWDNGHQVTYHVIF 1071


>gi|449268160|gb|EMC79030.1| Olfactomedin-like protein 2B, partial [Columba livia]
          Length = 716

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ D FK    S +Y L   + G  HVV+
Sbjct: 481 GAWMKDPL---AREERIYVTNYYYGNTLVEFRNLDNFKQGRWSNSYKLPYSWIGTGHVVY 537

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N SFYY++ F+ +I+++DL    +     L  V  + +      G++ +DF++DENGLW+
Sbjct: 538 NGSFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEESTPWRWRGHSDVDFAVDENGLWI 597

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G +     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 598 IYPAISYEGFNQEVIVLSKLNAADLSTQKETTWRTGLRKNFYGNCFVICGVLYAVDSYNK 657

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N +  TT I YN + + LY WD G+ +TY + +
Sbjct: 658 RNANISYAFDTHTNTQIIPRLLFENEYAYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 714


>gi|339249886|ref|XP_003373928.1| conserved hypothetical protein [Trichinella spiralis]
 gi|316969828|gb|EFV53868.1| conserved hypothetical protein [Trichinella spiralis]
          Length = 562

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 133/259 (51%), Gaps = 17/259 (6%)

Query: 551 CQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTS-GNSEKFWMTTDSDPTHLN 609
           C +   GKP+FH                 +GAWMKDP P    + +K W+T       L 
Sbjct: 309 CALQRFGKPIFHAHAK-----------TYYGAWMKDPFPRRYEDFKKRWLTQHFYGNSLY 357

Query: 610 EYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDL--GSSKIINI 667
           E++++   + +  S   +L   + G  HV++N S +Y +  +  I ++D+  G  K   I
Sbjct: 358 EFENEADLRREKVSRIIDLPYMYDGTGHVIYNGSLFYQRAGTPKIAKYDIYTGEYKEKAI 417

Query: 668 VNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSNNNT-AVTKLDTATLQIQYTWNIT 726
             ++    +  LYK  YN  DF++DENGLWV+Y   N     V+ +D   L I  TW IT
Sbjct: 418 AKVA-YKYDHYLYKVPYNYFDFAIDENGLWVVYRYWNKQYPVVSHVDMRDLAILQTWEIT 476

Query: 727 LLHK-KVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITY 785
            L + ++ D FV+CG LY + S T+ N+N+    DLY+N L ++ + + N + ++ MI Y
Sbjct: 477 ELDRSEIADCFVICGSLYCIQSNTELNSNVSVKYDLYRNKLTKIDIPWVNLYQSSNMIAY 536

Query: 786 NSRYKDLYTWDRGNSLTYP 804
           N   K +Y +D G  LT P
Sbjct: 537 NPSDKKIYVFDYGYLLTVP 555



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 5/106 (4%)

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK-RESC 272
            G  G+PG  G  G+ G+PG  G  G  G  GP+G  G+ GI+G     + C +   ++C
Sbjct: 162 QGAQGLPGPRGPQGRRGMPGDRGPTGPPGERGPKGMPGEPGIDGKDANCSTCEFSLYDNC 221

Query: 273 SLLPN--SETSQLLIPPTIVGSEHIFS-SSPIVVREGDNVRL-RCV 314
           SL     S   +L     + G+E + S  + +   E DN RL +C+
Sbjct: 222 SLSTQNGSHLPRLFPFQYLTGAEALESIGNFLSASEQDNSRLSQCI 267



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 29/45 (64%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           E+GA G+ GP GPQG  G  G RGP G  G  GP+G+PG+ G  G
Sbjct: 161 EQGAQGLPGPRGPQGRRGMPGDRGPTGPPGERGPKGMPGEPGIDG 205



 Score = 45.8 bits (107), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 6/52 (11%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           G QG+PG    RGP+G  G PG +G  G  G+RGPKG    PG  G+DG+D 
Sbjct: 163 GAQGLPG---PRGPQGRRGMPGDRGPTGPPGERGPKGM---PGEPGIDGKDA 208



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 28/47 (59%)

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           +G  G PG  G  GR G+PG+ G  G PG  G  G+PG+ G+ GKD 
Sbjct: 162 QGAQGLPGPRGPQGRRGMPGDRGPTGPPGERGPKGMPGEPGIDGKDA 208



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 3/47 (6%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
           +G  G PGP+   G +G+RG  GD G  G  G  G  G+PGEPG+DG
Sbjct: 162 QGAQGLPGPR---GPQGRRGMPGDRGPTGPPGERGPKGMPGEPGIDG 205



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 103 CNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           C +  EYC       QG  G  G  G +G  G+ G+RG  G PG  GP G  G PG +GK
Sbjct: 147 CMAVHEYCAEMNDLEQGAQGLPGPRGPQGRRGMPGDRGPTGPPGERGPKGMPGEPGIDGK 206


>gi|355745854|gb|EHH50479.1| hypothetical protein EGM_01313 [Macaca fascicularis]
          Length = 794

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 559 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 615

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 616 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 675

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 676 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 735

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 736 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 792


>gi|332219360|ref|XP_003258824.1| PREDICTED: olfactomedin-like protein 2B [Nomascus leucogenys]
          Length = 753

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 518 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 574

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 575 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 634

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 635 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 694

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 695 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 751


>gi|194376898|dbj|BAG63010.1| unnamed protein product [Homo sapiens]
          Length = 751

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 516 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 572

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 573 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 632

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 633 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 692

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 693 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 749


>gi|119611102|gb|EAW90696.1| olfactomedin-like 2B, isoform CRA_a [Homo sapiens]
          Length = 682

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 447 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 503

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 504 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 563

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 564 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 623

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 624 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 680


>gi|410254524|gb|JAA15229.1| olfactomedin-like 2B [Pan troglodytes]
 gi|410342941|gb|JAA40417.1| olfactomedin-like 2B [Pan troglodytes]
          Length = 752

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 517 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 573

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 574 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 633

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 634 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 693

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 694 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 750


>gi|301608500|ref|XP_002933825.1| PREDICTED: olfactomedin-like protein 2B-like [Xenopus (Silurana)
            tropicalis]
          Length = 1015

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 128/237 (54%), Gaps = 13/237 (5%)

Query: 581  GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
            GAWMKDP       EK ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 780  GAWMKDPL---AKDEKIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 836

Query: 641  NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
            N SFYY++ F+ +I+++DL    +     L  V  + +      G++ +DF++DENGLWV
Sbjct: 837  NGSFYYNRAFTRNIIKYDLKHRYVAAWSMLHDVVYEESTPWRWRGHSDIDFAVDENGLWV 896

Query: 699  IY------GLSNNNTAVTKLDTA--TLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
            IY      G       ++KL++   T Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 897  IYPAIDDEGFQQEVIVLSKLNSVDLTTQKETTWRTGLRKDFYGNCFVICGVLYAVDSYNK 956

Query: 751  RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
            +N NI +A D + N  +   L F N ++ TT I YN + + LYTWD G+ +TY + +
Sbjct: 957  KNANISYAFDTHTNTQIVPRLLFVNEYSYTTQIDYNPKDRLLYTWDNGHQVTYDVIF 1013


>gi|426332484|ref|XP_004027835.1| PREDICTED: olfactomedin-like protein 2B [Gorilla gorilla gorilla]
          Length = 750

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 515 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 571

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 572 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 631

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 632 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 691

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 692 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 748


>gi|51699285|dbj|BAD38863.1| photomedin-2 [Homo sapiens]
          Length = 750

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 515 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 571

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 572 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 631

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 632 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 691

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 692 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 748


>gi|402856928|ref|XP_003893030.1| PREDICTED: olfactomedin-like protein 2B [Papio anubis]
          Length = 753

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 518 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 574

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 575 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 634

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 635 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 694

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 695 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 751


>gi|395825158|ref|XP_003785808.1| PREDICTED: olfactomedin-like protein 2B [Otolemur garnettii]
          Length = 756

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 521 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 577

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 578 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 637

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 638 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 697

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 698 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 754


>gi|114561001|ref|XP_513950.2| PREDICTED: olfactomedin-like 2B [Pan troglodytes]
 gi|410224622|gb|JAA09530.1| olfactomedin-like 2B [Pan troglodytes]
 gi|410254522|gb|JAA15228.1| olfactomedin-like 2B [Pan troglodytes]
 gi|410296674|gb|JAA26937.1| olfactomedin-like 2B [Pan troglodytes]
 gi|410342939|gb|JAA40416.1| olfactomedin-like 2B [Pan troglodytes]
          Length = 750

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 515 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 571

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 572 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 631

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 632 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 691

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 692 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 748


>gi|109017867|ref|XP_001118163.1| PREDICTED: olfactomedin-like protein 2B-like [Macaca mulatta]
          Length = 753

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 518 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 574

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 575 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 634

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 635 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 694

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 695 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 751


>gi|46195719|ref|NP_056256.1| olfactomedin-like protein 2B precursor [Homo sapiens]
 gi|160418997|sp|Q68BL8.2|OLM2B_HUMAN RecName: Full=Olfactomedin-like protein 2B; AltName:
           Full=Photomedin-2; Flags: Precursor
 gi|45501067|gb|AAH67274.1| Olfactomedin-like 2B [Homo sapiens]
 gi|57997592|emb|CAI45982.1| hypothetical protein [Homo sapiens]
 gi|221045696|dbj|BAH14525.1| unnamed protein product [Homo sapiens]
          Length = 750

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 515 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 571

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 572 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 631

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 632 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 691

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 692 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 748


>gi|397508318|ref|XP_003824607.1| PREDICTED: olfactomedin-like protein 2B [Pan paniscus]
          Length = 750

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 515 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 571

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 572 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 631

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 632 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 691

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 692 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 748


>gi|395729486|ref|XP_002809916.2| PREDICTED: olfactomedin-like 2B [Pongo abelii]
          Length = 753

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 518 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 574

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 575 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 634

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 635 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 694

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 695 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 751


>gi|395530656|ref|XP_003767404.1| PREDICTED: olfactomedin-like protein 2B [Sarcophilus harrisii]
          Length = 767

 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ D FK    S +Y L   + G  HVV+
Sbjct: 532 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLDNFKQGRWSNSYKLPYSWIGTGHVVY 588

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  D        G++ +DF++DENGLW+
Sbjct: 589 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYDEATPWRWRGHSDVDFAVDENGLWL 648

Query: 699 IY------GLSNNNTAVTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL++  L    + TW   L     G+ FV+CGVLY VDS   
Sbjct: 649 IYPALDDEGFSQEVIVLSKLNSVDLSTHKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 708

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 709 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 765


>gi|324504228|gb|ADY41826.1| Gliomedin [Ascaris suum]
          Length = 514

 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 140/268 (52%), Gaps = 24/268 (8%)

Query: 548 TLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSG-NSEKFWMTTDSDPT 606
           T  C + +VGKPVFH  +           +  FG+WM+D +P +G +  K W+T      
Sbjct: 256 TAHCYLESVGKPVFHAHS-----------NTYFGSWMRDAYPRTGEDMMKRWLTNHFQGD 304

Query: 607 HLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSKIIN 666
            + EY D+   + +    T++L   + G     FN SFY+H+  +  I +++L S +   
Sbjct: 305 TIEEYMDEADMRRERVYATHHLPYLYDGTNSAFFNGSFYFHRAGTPKIGKYELHSKRYNE 364

Query: 667 IVNLSTVDPNIK------LYKTGYNVMDFSLDENGLWVIYGLSN-NNTAVTKLDTATLQI 719
           ++    +D N        L+    N  D ++DEN LWV++   + ++ +V+KLD   L I
Sbjct: 365 VL----IDENAAHKGSKYLFNLSMNYFDLAVDENALWVLFHYEDADHLSVSKLDINNLTI 420

Query: 720 QYTWNITLL-HKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFT 778
             TWN+TL+ H +V + FVVCGVLY+V S  +  ++I  A D Y+N     ++ + N + 
Sbjct: 421 YETWNLTLINHTEVANGFVVCGVLYLVSSSYELKSDISIAYDFYRNKYRAPNIRWVNLYR 480

Query: 779 NTTMITYNSRYKDLYTWDRGNSLTYPIR 806
           N  M++YN   K +Y +D G  LT P R
Sbjct: 481 NANMMSYNPYDKRIYVYDHGYLLTLPAR 508


>gi|348505054|ref|XP_003440076.1| PREDICTED: olfactomedin-like protein 2B-like [Oreochromis
           niloticus]
          Length = 953

 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 130/243 (53%), Gaps = 14/243 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP   +G   K ++T      +L E+++ ++FK    S +Y L   + G  HVV+
Sbjct: 713 GAWMKDPKSDNG---KIYVTNFYYGNNLLEFRNLEVFKQGRFSNSYKLPYNWIGTGHVVY 769

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV---DPNIKLYKTGYNVMDFSLDENGLW 697
             +FYY++ FS  I++FDL    +     L      D +       ++ +DF++DE+GLW
Sbjct: 770 GGAFYYNRAFSRDIIKFDLRQRYVAAWTMLHDALYEDSSSPWDWRSHSDIDFAVDESGLW 829

Query: 698 VIY------GLSNNNTAVTKLDTA--TLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVT 749
           +IY      G       +++LD +  T+Q + TW   L     G+ FVVCGVLY VDS  
Sbjct: 830 IIYPALDDEGFLQEVVVLSRLDPSDLTMQRETTWRTGLKRNHFGNCFVVCGVLYAVDSYN 889

Query: 750 DRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
            R+ N+ +A D + N  +   + F N +T TT I YN +   LY WD G+ +TY I++  
Sbjct: 890 QRDANLEYAFDTHTNTQMIPRMPFINNYTYTTQIDYNPKEGVLYAWDNGHQVTYNIKFAY 949

Query: 810 IDS 812
           +D+
Sbjct: 950 VDA 952


>gi|291397538|ref|XP_002715156.1| PREDICTED: olfactomedin-like 2B [Oryctolagus cuniculus]
          Length = 744

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 509 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 565

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 566 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 625

Query: 699 IY------GLSNNNTAVTKLDTATLQIQ--YTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L +Q   TW   L     G+ FV+CGVLY VDS   
Sbjct: 626 IYPALDDEGFSQEVIVLSKLNAVDLSMQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 685

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT + YN + + LY WD G+ +TY + +
Sbjct: 686 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQVDYNPKDRLLYAWDNGHQVTYHVIF 742


>gi|403305778|ref|XP_003943431.1| PREDICTED: olfactomedin-like protein 2B [Saimiri boliviensis
           boliviensis]
          Length = 753

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 518 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 574

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           + +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 575 DGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 634

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 635 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 694

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 695 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 751


>gi|426217025|ref|XP_004002754.1| PREDICTED: olfactomedin-like protein 2B [Ovis aries]
          Length = 759

 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 524 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 580

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 581 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 640

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 641 IYPALDDEGFSQEVIVLSKLNAVDLSTQKETTWRTGLRRNLYGNCFVICGVLYAVDSHNQ 700

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 701 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 757


>gi|432103841|gb|ELK30678.1| Olfactomedin-like protein 2B [Myotis davidii]
          Length = 500

 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP     + E+ ++T  S  + L E+++ + F+    S +Y L   + G  HVVF
Sbjct: 265 GAWMKDP---LASDERIYVTDSSYGSTLVEFRNLENFRQGRWSNSYKLPYSWAGTGHVVF 321

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNL--STVDPNIKLYKTGYNVMDFSLDENGLWV 698
             +FYY + F+ +++++DL    +     L  +  +      + G++ +DF++DENGLW+
Sbjct: 322 GGAFYYSRAFTRTLIKYDLRRRYVAAWALLPDAVYEEATPWGRQGHSDVDFAVDENGLWL 381

Query: 699 IY------GLSNNNTAVTKLDTATLQIQ--YTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY        S     ++KL+ A L  Q   TW   L     G  FV+CGVLY VDS   
Sbjct: 382 IYPALDEESFSQEVIVLSKLNAADLSTQKETTWRTGLRRNLYGHCFVICGVLYAVDSHNQ 441

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 442 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYRVIF 498


>gi|296229491|ref|XP_002760253.1| PREDICTED: olfactomedin-like protein 2B [Callithrix jacchus]
          Length = 755

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 520 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 576

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           + +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 577 DGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 636

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 637 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 696

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 697 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 753


>gi|154152127|ref|NP_001093824.1| olfactomedin-like protein 2B precursor [Bos taurus]
 gi|160417374|sp|A6QLD2.1|OLM2B_BOVIN RecName: Full=Olfactomedin-like protein 2B; Flags: Precursor
 gi|151554481|gb|AAI47923.1| OLFML2B protein [Bos taurus]
 gi|296489859|tpg|DAA31972.1| TPA: olfactomedin-like protein 2B precursor [Bos taurus]
          Length = 759

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 524 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 580

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 581 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 640

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 641 IYPALDDEGFSQEVIVLSKLNAVDLSTQKETTWRTGLRRNLYGNCFVICGVLYAVDSHNQ 700

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 701 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 757


>gi|334321957|ref|XP_001369606.2| PREDICTED: olfactomedin-like protein 2B [Monodelphis domestica]
          Length = 675

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ D FK    S +Y L   + G  HVV+
Sbjct: 440 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLDNFKQGRWSNSYKLPYSWIGTGHVVY 496

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 497 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWKWRGHSDVDFAVDENGLWL 556

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL++  L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 557 IYPALDEEGFSQEVIVLSKLNSVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSFNQ 616

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 617 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 673


>gi|281350851|gb|EFB26435.1| hypothetical protein PANDA_008850 [Ailuropoda melanoleuca]
          Length = 750

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 515 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 571

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 572 NGAFYYNRAFTRNIIKYDLKQRFVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 631

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 632 IYPALDDEGFSQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSHNQ 691

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 692 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 748


>gi|440899143|gb|ELR50494.1| Olfactomedin-like protein 2B [Bos grunniens mutus]
          Length = 761

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 526 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 582

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 583 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 642

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 643 IYPALDDEGFSQEVIVLSKLNAVDLSTQKETTWRTGLRRNLYGNCFVICGVLYAVDSHNQ 702

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 703 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 759


>gi|311253944|ref|XP_001924442.2| PREDICTED: olfactomedin-like protein 2B-like [Sus scrofa]
          Length = 753

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 518 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 574

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 575 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 634

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL++  L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 635 IYPALDDEGFSQEVIVLSKLNSVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 694

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 695 RNANISYAFDTHTNTQIIPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 751


>gi|194210522|ref|XP_001488004.2| PREDICTED: olfactomedin-like protein 2B-like [Equus caballus]
          Length = 750

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 515 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 571

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 572 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 631

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 632 IYPALDDEGFSQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 691

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 692 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 748


>gi|410986613|ref|XP_003999604.1| PREDICTED: olfactomedin-like protein 2B [Felis catus]
          Length = 747

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 512 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 568

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
             +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 569 GGAFYYNRAFTRNIIKYDLKQRFVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 628

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 629 IYPALDEEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRHLYGNCFVICGVLYAVDSHNQ 688

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 689 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 745


>gi|301769471|ref|XP_002920149.1| PREDICTED: olfactomedin-like protein 2B-like [Ailuropoda
           melanoleuca]
          Length = 747

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 512 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 568

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 569 NGAFYYNRAFTRNIIKYDLKQRFVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 628

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 629 IYPALDDEGFSQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSHNQ 688

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 689 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 745


>gi|344287018|ref|XP_003415253.1| PREDICTED: olfactomedin-like protein 2B-like [Loxodonta africana]
          Length = 754

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 519 GAWMKDPL---AKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 575

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 576 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 635

Query: 699 IY------GLSNNNTAVTKLDTATLQIQ--YTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L +Q   TW   L     G+ FV+CGVLY VDS   
Sbjct: 636 IYPALDDEGFSQEFIILSKLNAVDLSMQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 695

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 696 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 752


>gi|119611103|gb|EAW90697.1| olfactomedin-like 2B, isoform CRA_b [Homo sapiens]
 gi|119611104|gb|EAW90698.1| olfactomedin-like 2B, isoform CRA_b [Homo sapiens]
          Length = 409

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/235 (35%), Positives = 125/235 (53%), Gaps = 13/235 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 174 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 230

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 231 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 290

Query: 699 IY------GLSNNNTAVTKLDTATLQIQ--YTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q   TW   L     G+ FV+CGVLY VDS   
Sbjct: 291 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 350

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPI 805
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY +
Sbjct: 351 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHV 405


>gi|4884150|emb|CAB43286.1| hypothetical protein [Homo sapiens]
          Length = 432

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 197 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 253

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 254 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 313

Query: 699 IY------GLSNNNTAVTKLDTATLQIQ--YTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+ A L  Q   TW   L     G+ FV+CGVLY VDS   
Sbjct: 314 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 373

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 374 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 430


>gi|351709885|gb|EHB12804.1| Olfactomedin-like protein 2B [Heterocephalus glaber]
          Length = 746

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 511 GAWMKDP---LAEDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 567

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +F+Y++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 568 NGAFFYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 627

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 628 IYPALDDEGFSQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 687

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 688 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 744


>gi|354489555|ref|XP_003506927.1| PREDICTED: olfactomedin-like protein 2B [Cricetulus griseus]
 gi|344252476|gb|EGW08580.1| Olfactomedin-like protein 2B [Cricetulus griseus]
          Length = 750

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       ++ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 515 GAWMKDPL---AKDDRIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 571

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 572 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 631

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 632 IYPALDDEGFSQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 691

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 692 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 748


>gi|157821323|ref|NP_001100665.1| olfactomedin-like protein 2B precursor [Rattus norvegicus]
 gi|149058090|gb|EDM09247.1| olfactomedin-like 2B (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 746

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       ++ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 511 GAWMKDPL---AKDDRIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 567

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 568 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEETTPWRWQGHSDVDFAVDENGLWL 627

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 628 IYPALDDEGFSQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 687

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 688 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 744


>gi|170571065|ref|XP_001891586.1| Olfactomedin-like domain containing protein [Brugia malayi]
 gi|158603836|gb|EDP39611.1| Olfactomedin-like domain containing protein [Brugia malayi]
          Length = 508

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 136/264 (51%), Gaps = 16/264 (6%)

Query: 548 TLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSG-NSEKFWMTTDSDPT 606
           T  C +  VGKP+FH  +           +  FG+WM+D +P +G +  K WMT      
Sbjct: 250 TAHCYLDDVGKPIFHAHS-----------NXYFGSWMRDAYPQNGKDMMKRWMTKHFQGD 298

Query: 607 HLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSKI-- 664
            + EY D+   +      T+++   + G   + FN S Y+H+  +  I +++L S     
Sbjct: 299 TVEEYLDEGDMRRQRAFVTHHMPYLYDGTNLIFFNGSIYFHRAGTPKIGKYELSSKDYNE 358

Query: 665 INIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSNNN-TAVTKLDTATLQIQYTW 723
           + I   +    N  L+    N  D ++DEN LWV++   +    +V KLD + L I  TW
Sbjct: 359 VLIDKHAAHKGNNYLFNLSMNYFDLAVDENALWVLFHYEDEEYLSVAKLDISNLTIYETW 418

Query: 724 NITLL-HKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTM 782
           N+TL+ H +V + FVVCGVLY+V S  D  + I  A DLY+N   + ++++ N + N  M
Sbjct: 419 NLTLINHTEVANGFVVCGVLYLVRSSYDLKSEIAIAYDLYRNKYRKPNIHWINLYRNANM 478

Query: 783 ITYNSRYKDLYTWDRGNSLTYPIR 806
           I+YN   K +Y +D G  LT P R
Sbjct: 479 ISYNPYDKRIYIYDHGYLLTLPAR 502


>gi|291232210|ref|XP_002736052.1| PREDICTED: colmedin-like [Saccoglossus kowalevskii]
          Length = 896

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 121/234 (51%), Gaps = 8/234 (3%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           +G+WM DP   S   +K W  +  +   + E+ + D  K+   +  Y L E ++G  H+V
Sbjct: 665 WGSWMMDPLVIS---DKIWTMSHFNGNIMKEWNNIDELKTKQGNKDYRLPEHWEGTGHIV 721

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKII--NIVNLSTVDPNIKLYKTGYNVMDFSLDENGLW 697
           +NNS YYH   +  I ++D+ + +I+  N +  +       LY T Y  +D  +DE GLW
Sbjct: 722 YNNSVYYHVARTRDIARYDMITERIVARNKLQGAGFRDTKYLYATEYTYIDLEIDETGLW 781

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
            IY  S +  N  ++KLDT  L +  T N     +  GD F++CGVLY   S   + T I
Sbjct: 782 AIYSTSQSKGNMVISKLDTLDLSVIRTINTDYEKRASGDAFIICGVLYSTKSPRVKETTI 841

Query: 756 RFALDLYKNDLL-EVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYH 808
            FA DL+   +L ++ + F N +    M++YN   + +Y+W+ G  + YP+   
Sbjct: 842 NFAYDLFSGKVLDDLDIPFRNEYGLNAMVSYNPYEQVIYSWNNGYLVKYPLELE 895



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 121/285 (42%), Gaps = 84/285 (29%)

Query: 67  EEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCP--------------- 111
           E+   R K + +    + W W++ Y+R+P+ A+   CN TK  C                
Sbjct: 82  EDENRRVKRELDWNSRSDWAWVSTYARVPMQAIVELCNVTKNMCAISKGPGNEDDMTDSD 141

Query: 112 -------------------------------PGLQGPIGQKGEIGAKGEMGVKGE----- 135
                                           GL+G  G+KG +G +G  G+KG+     
Sbjct: 142 NSGLLGLPGPPGPPGIIGRPGDKGEPGNDGLNGLRGDKGEKGFMGPEGPPGLKGDIGMPG 201

Query: 136 ----RGEKGAPGVVGPPGPQGIPGDEGKRGP--------------------------KGD 165
               +GEKG+PG VG  G QG  G+ GK+G                           KGD
Sbjct: 202 VNNIKGEKGSPGGVGDTGKQGPRGNRGKKGATVTGPPGPPGPPGEKGDTGMKGDQGEKGD 261

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK--- 222
           MG PG +G  G++G  G  G  G PG+ G  G DG+ GE G +G PG+ G  G  GK   
Sbjct: 262 MGEPGIEGEMGNDGLDGEMGPEGPPGQKGEMGEDGMDGEMGPEGPPGQKGEKGSDGKQGV 321

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G+ G DG+PG  G  G+KG  G RG  G  G+ G+PG P    Y
Sbjct: 322 QGIDGNDGLPGVKGNTGDKGENGSRGMDGIPGVPGLPGLPGEAEY 366



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 88/200 (44%), Positives = 103/200 (51%), Gaps = 13/200 (6%)

Query: 94  IPLVAMQGFCNSTKE---YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
           I L  M+G   S  E      PG  G  G  G+ G  G MG KGE+G+ G PGV GP GP
Sbjct: 449 IGLPGMKGEMGSPGERGIIGQPGSDGMPGVPGQKGNDGVMGDKGEKGDLGIPGVPGPIGP 508

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGI--PGDEGKRGPKGDMGYPG--RIGLDGRDGLPGEPG 206
           +G  GD GK    G+ G PG QGI  PG +GK G  G  G PG    G DG  GLPG PG
Sbjct: 509 EGKKGDSGK---DGNPGIPGLQGIGEPGKDGKDGNPGSPGIPGIGETGKDGPQGLPGVPG 565

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           LDG  G  G  G PGKDG  G+DG+ G  G  G +G  G  G  G+ G  G+ G  A  A
Sbjct: 566 LDGQKGDKGDKGEPGKDGKDGEDGMTGPVGPEGPRGRKGDEGAVGEQGERGLKG--AKGA 623

Query: 267 YKRESCSLLPNSETSQLLIP 286
                  + P +E  +LL P
Sbjct: 624 SDDTVIEIKP-TEEPKLLRP 642



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 98/183 (53%), Gaps = 28/183 (15%)

Query: 106 TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           T E  P GL GP G  G+ G  G+ G KGE+GE G  G  G  G  G+ G+ G  G +G 
Sbjct: 407 TGEIGPMGLTGPKGLPGQDGVDGDPGQKGEKGEMGNDGEAGDIGLPGMKGEMGSPGERGI 466

Query: 166 MGYPGPQGIPGDEGK---------RGPKGDMGYP---------GRIGLDGRDGLPGEPGL 207
           +G PG  G+PG  G+         +G KGD+G P         G+ G  G+DG PG PGL
Sbjct: 467 IGQPGSDGMPGVPGQKGNDGVMGDKGEKGDLGIPGVPGPIGPEGKKGDSGKDGNPGIPGL 526

Query: 208 DGI--PGRNGMDGIPGKDGLP-----GKD---GIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GI  PG++G DG PG  G+P     GKD   G+PG  G +G+KG  G +G  GK G +G
Sbjct: 527 QGIGEPGKDGKDGNPGSPGIPGIGETGKDGPQGLPGVPGLDGQKGDKGDKGEPGKDGKDG 586

Query: 258 VPG 260
             G
Sbjct: 587 EDG 589



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 75/135 (55%), Gaps = 15/135 (11%)

Query: 133 KGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           KG+ GE G  G+ GP   PG  G+ GD G++G KG+MG     G  GD G  G KG+MG 
Sbjct: 404 KGDTGEIGPMGLTGPKGLPGQDGVDGDPGQKGEKGEMGN---DGEAGDIGLPGMKGEMGS 460

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG  G+ G+   PG  G+ G+PG+ G DG+ G  G  G  GIPG  G        GP G 
Sbjct: 461 PGERGIIGQ---PGSDGMPGVPGQKGNDGVMGDKGEKGDLGIPGVPGP------IGPEGK 511

Query: 250 RGKSGINGVPGTPAI 264
           +G SG +G PG P +
Sbjct: 512 KGDSGKDGNPGIPGL 526



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 95/231 (41%), Gaps = 54/231 (23%)

Query: 111 PPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           PPG +G +G+ G   E+G +G  G KGE+G  G  GV G  G  G+PG +G  G KG+ G
Sbjct: 285 PPGQKGEMGEDGMDGEMGPEGPPGQKGEKGSDGKQGVQGIDGNDGLPGVKGNTGDKGENG 344

Query: 168 YPGPQGIPGDEGKRG-------------------------------------------PK 184
             G  GIPG  G  G                                            K
Sbjct: 345 SRGMDGIPGVPGLPGLPGEAEYIEDDEDIVASGIIITGPPGPPGPPGPPGPQGPIGQGEK 404

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           GD G  G +GL G  GLPG+ G+DG PG+ G  G  G DG  G  G+PG       KG  
Sbjct: 405 GDTGEIGPMGLTGPKGLPGQDGVDGDPGQKGEKGEMGNDGEAGDIGLPGM------KGEM 458

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP--PTIVGSE 293
           G  G RG  G  G  G P +   K     +    E   L IP  P  +G E
Sbjct: 459 GSPGERGIIGQPGSDGMPGVPGQKGNDGVMGDKGEKGDLGIPGVPGPIGPE 509


>gi|312088602|ref|XP_003145924.1| colmedin family protein 2 [Loa loa]
 gi|307758911|gb|EFO18145.1| colmedin family protein 2, partial [Loa loa]
          Length = 471

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 136/264 (51%), Gaps = 16/264 (6%)

Query: 548 TLDCQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSG-NSEKFWMTTDSDPT 606
           T  C +  VGKP+FH  +           +  FG+WM+D +P +G +  K WMT      
Sbjct: 213 TAHCYLDDVGKPIFHAHS-----------NTYFGSWMRDAYPQNGKDMMKRWMTKHFQGE 261

Query: 607 HLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSSKI-- 664
            + EY D+   +      T++L   + G   + FN S Y+H+  +  I +++L S     
Sbjct: 262 TVEEYLDEGDMRRQRIFVTHHLPYLYDGTNLIFFNGSIYFHRAGTPKIGKYELLSKDYNE 321

Query: 665 INIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSNNN-TAVTKLDTATLQIQYTW 723
           + I   +    N  L+    N  D ++DEN LWV++   +    +V KLD + L I  TW
Sbjct: 322 VLIDKHAAHKGNSYLFNLSMNYFDLAVDENALWVLFHYEDEEYLSVAKLDISNLTIYETW 381

Query: 724 NITLL-HKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTM 782
           N+TL+ H +V + FVVCGVLY+V S  +  + I  A DLY+N   + ++++ N + N  M
Sbjct: 382 NLTLINHTEVANGFVVCGVLYLVKSSYELKSEIAIAYDLYRNKYRKPNIHWINLYRNANM 441

Query: 783 ITYNSRYKDLYTWDRGNSLTYPIR 806
           I+YN   K +Y +D G  LT P R
Sbjct: 442 ISYNPYDKRIYVYDHGYLLTLPAR 465


>gi|74208871|dbj|BAE21187.1| unnamed protein product [Mus musculus]
          Length = 746

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       ++ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 511 GAWMKDP---LAKDDRIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 567

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 568 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 627

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G +     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 628 IYPALDDEGFNQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 687

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 688 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 744


>gi|224922773|ref|NP_796042.3| olfactomedin-like protein 2B precursor [Mus musculus]
 gi|160419005|sp|Q3V1G4.2|OLM2B_MOUSE RecName: Full=Olfactomedin-like protein 2B; AltName:
           Full=Photomedin-2; Flags: Precursor
          Length = 746

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       ++ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 511 GAWMKDP---LAKDDRIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 567

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 568 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 627

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G +     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 628 IYPALDDEGFNQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 687

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 688 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 744


>gi|148707206|gb|EDL39153.1| olfactomedin-like 2B [Mus musculus]
          Length = 746

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       ++ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 511 GAWMKDP---LAKDDRIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 567

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 568 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 627

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G +     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 628 IYPALDDEGFNQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 687

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 688 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 744


>gi|19343913|gb|AAH25654.1| Olfactomedin-like 2B [Mus musculus]
          Length = 746

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       ++ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 511 GAWMKDP---LAKDDRIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 567

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 568 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 627

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G +     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 628 IYPALDDEGFNQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 687

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 688 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 744


>gi|26325244|dbj|BAC26376.1| unnamed protein product [Mus musculus]
          Length = 746

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       ++ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 511 GAWMKDP---LAKDDRIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 567

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 568 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 627

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G +     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 628 IYPALDDEGFNQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 687

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 688 RNANISYAFDTHINTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 744


>gi|327270221|ref|XP_003219888.1| PREDICTED: olfactomedin-like protein 2B-like [Anolis carolinensis]
          Length = 770

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 123/237 (51%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ D FK    S +Y L   + G  H VF
Sbjct: 535 GAWMKDP---VAKDERIYVTNYYYGNTLVEFRNLDNFKQGRWSNSYKLPYSWMGTGHAVF 591

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N S YY++ F+ +++++DL    +     L  V  D        G++ +DF++DENGLW+
Sbjct: 592 NGSLYYNRAFTRNLIKYDLKQRFVAAWAMLHDVAYDEETPWRWRGHSDVDFAVDENGLWI 651

Query: 699 IY------GLSNNNTAVTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L    + TW   L     G+ FV+CGVLY VDS   
Sbjct: 652 IYPAINYEGFSQEVIVLSKLNANDLSTRKETTWRTGLRKNFYGNSFVICGVLYAVDSYNR 711

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           +N NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 712 KNANISYAFDTHTNTQIIPHLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYNVIF 768


>gi|348561694|ref|XP_003466647.1| PREDICTED: olfactomedin-like protein 2B-like [Cavia porcellus]
          Length = 743

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 508 GAWMKDP---LAEDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYNWIGTGHVVY 564

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +F+Y++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 565 NGAFFYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 624

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G S     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 625 IYPALDDEGFSQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 684

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N +  TT I YN + + LY WD G+ +TY + +
Sbjct: 685 RNANISYAFDTHTNTQIIPRLLFENEYAYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 741


>gi|74192483|dbj|BAE43035.1| unnamed protein product [Mus musculus]
          Length = 594

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 126/237 (53%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       ++ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 359 GAWMKDP---LAKDDRIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 415

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 416 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 475

Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY      G +     ++KL+   L  Q + TW   L     G+ FV+CGVLY VDS   
Sbjct: 476 IYPALDDEGFNQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 535

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 536 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 592


>gi|292630016|ref|XP_696310.4| PREDICTED: hypothetical LOC567907 [Danio rerio]
          Length = 693

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 128/239 (53%), Gaps = 18/239 (7%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP    GN +  ++T       L E++D D FK    S +Y L   + G  HVV+
Sbjct: 459 GAWMKDP---KGNGKVVYVTDYYYGNQLLEFRDIDTFKQGQVSNSYKLPYNWIGTGHVVY 515

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT------GYNVMDFSLDEN 694
           + SF+Y++ FS  I++FDL   ++  +   +T+   I   +       G++ +DFS+DE+
Sbjct: 516 SGSFFYNRAFSRDIIRFDL---RLRYVAAWTTLHDAILEEEEAPWTWGGHSDIDFSVDES 572

Query: 695 GLWVIY------GLSNNNTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSV 748
           GLW++Y      G       ++KL  + LQ + +W   L     G+ FV+CGVLY VDS 
Sbjct: 573 GLWLVYPALDDEGFHQEVIILSKLRASDLQKEKSWRTGLRRNYYGNCFVICGVLYAVDSF 632

Query: 749 TDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
              + NI +A D + +  +   L F N +T TT I YN + + LY WD G+ +TY + +
Sbjct: 633 ERTHANISYAFDTHTHTQMIPRLPFINNYTYTTQIDYNPKERMLYAWDNGHQVTYDVIF 691


>gi|410921384|ref|XP_003974163.1| PREDICTED: olfactomedin-like protein 2B-like [Takifugu rubripes]
          Length = 931

 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 131/244 (53%), Gaps = 18/244 (7%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP   SGN +K ++T      +L E+++ D+FK+   + +Y L   + G  HVV+
Sbjct: 692 GAWMKDP--LSGN-DKIYVTNFYYGNNLLEFRNLDVFKAGRFTNSYKLPYNWIGTGHVVY 748

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT-----GYNVMDFSLDENG 695
           N +FYY + FS  I++FDL    +     L   D  I+   +       + + F++DE+G
Sbjct: 749 NGAFYYSRAFSRDIIKFDLRHRLVAAWTLLH--DALIEESSSPSDWRSQSSVSFAVDESG 806

Query: 696 LWVIY------GLSNNNTAVTKLDTATLQIQ--YTWNITLLHKKVGDMFVVCGVLYVVDS 747
           LW++Y      G       +++++   L  Q   TW   L   + G+ F+VCGVLY VDS
Sbjct: 807 LWIVYPALDEEGFMQEMIVLSRVNPLDLSTQPETTWRTGLRRNRYGNFFIVCGVLYAVDS 866

Query: 748 VTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
              ++ N+ +A D + N  +   + FTN +T TT I YN +   LY WD G+ +TY I++
Sbjct: 867 YNQKDANLEYAFDTHTNTQMIPRMPFTNNYTYTTQIDYNPKEGVLYAWDNGHQVTYNIKF 926

Query: 808 HEID 811
             ++
Sbjct: 927 AYVE 930


>gi|241786167|ref|XP_002414449.1| neural cell adhesion molecule L1, putative [Ixodes scapularis]
 gi|215508660|gb|EEC18114.1| neural cell adhesion molecule L1, putative [Ixodes scapularis]
          Length = 351

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 113/200 (56%), Gaps = 22/200 (11%)

Query: 283 LLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA 342
           +L+PP IVGSE   SSS ++VREG NV L C A G+P P I W+  + + I +G+W+  A
Sbjct: 152 VLVPPDIVGSE---SSSDVLVREGSNVTLVCRAKGYPAPRITWRREDGQSIAVGNWQQHA 208

Query: 343 VAS--STLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGR 385
            AS    L+ T+++R++MG Y+C+A N                PP I I N+ +G P+G 
Sbjct: 209 AASDRDELSVTKVSRLHMGPYLCIASNGVPSPVSRRILLQVHFPPMIWIPNQLIGAPLGG 268

Query: 386 TATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFD 445
              ++C  EAFP+S+ YW    G LI     KYS++  +   Y+  M+L I  +   DF 
Sbjct: 269 EVVMDCNTEAFPMSINYWTLEGGDLIAESS-KYSLNRTEN-VYKVHMRLRIRRIVPEDFG 326

Query: 446 TYRCISKNEVDIAKGSLILF 465
            YRC +KN +   +GS+ L+
Sbjct: 327 AYRCFAKNSLGSTEGSIRLY 346


>gi|431916099|gb|ELK16353.1| Olfactomedin-like protein 2B [Pteropus alecto]
          Length = 550

 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 124/238 (52%), Gaps = 19/238 (7%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+
Sbjct: 315 GAWMKDPL---AKDERIYVTNYYYGNTLMEFRNLESFKQGRWSNSYKLPYSWVGTGHVVY 371

Query: 641 NNSFYYHKKFSNSIVQFDL-----GSSKIINIVNLSTVDPNIKLYKTGYNVMDFSLDENG 695
             + YY + F+ +I+++DL      +  +++ V  +   P       G++ +DF++DENG
Sbjct: 372 GGALYYSRAFTRNIIKYDLRLRFVAAWALLHDVAYAEATP---WSWHGHSDVDFAVDENG 428

Query: 696 LWVIY------GLSNNNTAVTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDS 747
           LW+IY      G S     ++KLD A L    + TW   L     G+ FV+CGVLY VDS
Sbjct: 429 LWLIYPALDDGGSSQEVIVLSKLDAADLSTRKETTWRTGLRRHVFGNCFVICGVLYAVDS 488

Query: 748 VTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPI 805
            + RN NI +A D + N      L F N +  TT + YN + + LY WD G+ +TY +
Sbjct: 489 RSQRNANISYAFDTHTNTQTVPRLLFENEYAYTTQVDYNPKDRLLYAWDNGHQVTYHV 546


>gi|241786165|ref|XP_002414448.1| lachesin, putative [Ixodes scapularis]
 gi|215508659|gb|EEC18113.1| lachesin, putative [Ixodes scapularis]
          Length = 297

 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 22/200 (11%)

Query: 283 LLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA 342
           +L+PP IVGSE   SSS ++VREG NV L C A G+P P I W+  + + I +G+W+  A
Sbjct: 102 VLVPPDIVGSE---SSSDVLVREGSNVTLVCRAKGYPAPRITWRREDGQSIAVGNWQQQA 158

Query: 343 VASST--LNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGR 385
            AS +  L+ T+++R++MG Y+C+A N                PP I I N+ +G P+G 
Sbjct: 159 AASDSDELSVTKVSRLHMGPYLCIASNGVPSPVSRRILVQVHFPPMIWIPNQLIGAPLGG 218

Query: 386 TATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFD 445
              ++C  EAFP+S+ YW    G LI  D  KYS+  ++   Y+  M+L I  +   DF 
Sbjct: 219 EVMMDCNTEAFPMSINYWTLEGGDLIA-DSSKYSLIRIEN-VYKVHMRLRIRRIVPEDFG 276

Query: 446 TYRCISKNEVDIAKGSLILF 465
            Y C +KN +   +GS+ L+
Sbjct: 277 AYSCFAKNSLGSTEGSIRLY 296


>gi|345486071|ref|XP_001604651.2| PREDICTED: lachesin-like [Nasonia vitripennis]
          Length = 437

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/202 (41%), Positives = 118/202 (58%), Gaps = 21/202 (10%)

Query: 282 QLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLG-SWKD 340
            +++PP I  S+   SSS  +VREG NV L C ATG P PSI WK  +NK I++  +   
Sbjct: 132 HVVVPPNIDDSQ---SSSDAIVREGANVTLTCKATGSPPPSIRWKRDDNKQISINKTLSV 188

Query: 341 SAVASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGR 385
           +    STL  TRI+R++MG Y+C+A N                PP + I ++ VGVP+G 
Sbjct: 189 NEWIGSTLEMTRISRLDMGNYLCIASNSVPPSVSKQIKVSVDFPPMLWIPHQLVGVPLGY 248

Query: 386 TATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSI-SDVDKGSYQYIMQLNISNVNISDF 444
           + TLEC  EA P S+ YW   DG +I H+G KY + S  +K SY+  M L I +V  SDF
Sbjct: 249 SVTLECHTEAHPTSLNYWTRDDGVMI-HEGRKYKVLSTPEKPSYKTNMTLTIVDVEKSDF 307

Query: 445 DTYRCISKNEVDIAKGSLILFE 466
            +Y+C++KN     +G++ L+E
Sbjct: 308 GSYKCVAKNPRGETEGTIRLYE 329


>gi|363740606|ref|XP_415383.3| PREDICTED: olfactomedin-like 2A [Gallus gallus]
          Length = 732

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 146/287 (50%), Gaps = 30/287 (10%)

Query: 537 GNVSSKG--LPNRT--LDCQ--VYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPT 590
           G VS+ G   PNR   ++C+  + +V  P+ H S    +           GAWMKDP   
Sbjct: 458 GAVSTGGPEAPNRVKEMECEGTIRSVDPPMEHHSYGRNE-----------GAWMKDP--- 503

Query: 591 SGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKF 650
           +   ++ ++T       L E++  + FK    S  Y L   + G  HVV+  +FYY++ F
Sbjct: 504 AAKDDRIYVTNYYYGNSLVEFRSLENFKQGRWSNLYKLPYNWIGTGHVVYRGAFYYNRAF 563

Query: 651 SNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWVIYGLSNNNTA 708
           + +I+++DL    +     L  V  +        G++ +DF++DE+GLWVIY  ++++ A
Sbjct: 564 TKNIIKYDLKERYVAGWALLHDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPSADDDYA 623

Query: 709 ------VTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALD 760
                 +++LD   L +  + TW   L     G+ F++CG+LY VD+ + +   I +A D
Sbjct: 624 QQEVIVLSRLDPGDLSVRRETTWRTGLKRNAYGNCFIICGILYAVDTSSQKEGQISYAFD 683

Query: 761 LYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
            + +   E+ L F N +  TT + YN + K LY WD G+ +TY + +
Sbjct: 684 THTDTEAELRLPFLNEYAFTTQVDYNPKEKVLYAWDNGHQMTYRLHF 730


>gi|170046006|ref|XP_001850577.1| lachesin [Culex quinquefasciatus]
 gi|167868939|gb|EDS32322.1| lachesin [Culex quinquefasciatus]
          Length = 380

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 118/199 (59%), Gaps = 23/199 (11%)

Query: 283 LLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA 342
           +++PP I+      +S+ +VVREG NV L+C A+G P+P I+W+   N+PI+ G+   S+
Sbjct: 107 VVVPPNILDYP---TSTDMVVREGSNVTLKCAASGSPQPVIMWRREGNEPISTGA---SS 160

Query: 343 VASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTA 387
           + +ST   +R+NR++MGAY+C+A N                PP I I+++ VG  +G+  
Sbjct: 161 LNASTFTISRVNRLHMGAYLCIASNGIPPSVSKRVMLIVHFPPMIWIQDQLVGAALGQRL 220

Query: 388 TLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447
           TLEC  EAFP S+ YW   D  + +  G ++  S  +  +Y+ +M+L I  V+I DF TY
Sbjct: 221 TLECNSEAFPRSINYWMKNDTIITQ--GKRFEPSTHEASNYKVVMKLTIKEVDIGDFGTY 278

Query: 448 RCISKNEVDIAKGSLILFE 466
           +C+ KN +    GS+ ++ 
Sbjct: 279 KCVVKNSLGETDGSIKVYH 297


>gi|28703910|gb|AAH47472.1| OLFML2B protein [Homo sapiens]
          Length = 233

 Score =  137 bits (346), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 13/232 (5%)

Query: 584 MKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNS 643
           MKDP       E+ ++T       L E+++ + FK    S +Y L   + G  HVV+N +
Sbjct: 1   MKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVYNGA 57

Query: 644 FYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWVIY- 700
           FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DENGLW+IY 
Sbjct: 58  FYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWLIYP 117

Query: 701 -----GLSNNNTAVTKLDTATLQIQ--YTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNT 753
                G S     ++KL+ A L  Q   TW   L     G+ FV+CGVLY VDS   RN 
Sbjct: 118 ALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQRNA 177

Query: 754 NIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPI 805
           NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY +
Sbjct: 178 NISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHV 229


>gi|242006982|ref|XP_002424321.1| predicted protein [Pediculus humanus corporis]
 gi|212507721|gb|EEB11583.1| predicted protein [Pediculus humanus corporis]
          Length = 740

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 20/201 (9%)

Query: 282 QLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDS 341
           ++++PP I+      +S+ +V+REG+NV L+CVATG P P+I+WK  + +PI+L + +++
Sbjct: 412 EVVVPPDILDYP---TSTDMVIREGNNVTLQCVATGFPTPTIVWKREQGEPISLSNGEEA 468

Query: 342 -AVASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGR 385
            +V  S L  T++NR++MGAY+C+A N                PP I I+N+ VG   G+
Sbjct: 469 LSVEGSVLTITKVNRLHMGAYLCIASNRVPPSVSKRIMLIVHFPPMIWIQNQLVGAQEGQ 528

Query: 386 TATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFD 445
             TL+C  EAFP S+ YW     T+ +    KY    +D  +Y+  M+L I +V ISD+ 
Sbjct: 529 PMTLQCHSEAFPKSINYWTRNGETIAQGLSGKYEPVLID-NAYKVQMKLTIKSVTISDYG 587

Query: 446 TYRCISKNEVDIAKGSLILFE 466
           +Y+CIS+N +    G + L+ 
Sbjct: 588 SYKCISRNSLGETDGEIKLYH 608



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 115/201 (57%), Gaps = 21/201 (10%)

Query: 282 QLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKD- 340
           ++++PP I+      +S+ +V REG NV +RC A G P+P IIWK    + I +G  ++ 
Sbjct: 118 EIVVPPDILDYP---TSTDMVAREGSNVTMRCAAKGMPEPKIIWKREGGETIPVGQGQEV 174

Query: 341 SAVASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGR 385
           S+V  S  N +R++R++MGAY+C+A N                PP I I+N+ VG   G+
Sbjct: 175 SSVDGSVFNISRVSRLHMGAYLCIAYNGVPPSVSKRITLIVHFPPMIWIQNQLVGAFEGQ 234

Query: 386 TATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFD 445
             TLEC  EA+P S+ YW    G +I   G KY    VD  +Y+  M+L I +V+ SDF 
Sbjct: 235 EVTLECHSEAYPKSINYWTGDRGDIIAQ-GNKYEPQLVD-NAYKVHMKLIIKSVSASDFG 292

Query: 446 TYRCISKNEVDIAKGSLILFE 466
           TY+C+SKN +    GS+ L+ 
Sbjct: 293 TYKCVSKNSLGHTDGSIKLYH 313



 Score = 39.3 bits (90), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 65/170 (38%), Gaps = 29/170 (17%)

Query: 305 EGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASST------LNFTRINRINM 358
           EG  V L C +  +PK    W       I  G+  +  +  +       L    ++  + 
Sbjct: 232 EGQEVTLECHSEAYPKSINYWTGDRGDIIAQGNKYEPQLVDNAYKVHMKLIIKSVSASDF 291

Query: 359 GAYMCLADNV------------PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFI 406
           G Y C++ N              P+ +   + V + +GR ATLEC V+        W  +
Sbjct: 292 GTYKCVSKNSLGHTDGSIKLYHVPEFVGPIKNVTITVGREATLECVVDNLSTYKVAWLRV 351

Query: 407 DGTLIEHDGV-------KYSISDVDKGSYQYIMQLNISNVNISDFDTYRC 449
           D   I    V       + S+++ DK ++     LN+ +V  SD   Y C
Sbjct: 352 DTQTILTIAVHVITKNHRISVTNSDKKTW----FLNVRDVRESDRGWYMC 397


>gi|123299969|dbj|BAF45333.1| olfactomedin-like 2A [Sus scrofa]
          Length = 476

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 135/276 (48%), Gaps = 27/276 (9%)

Query: 545 PNRTLDCQ--VYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEKFWMTTD 602
           P R   C+  + AV  PV H S    +           GAWMKDP   +   +K ++T  
Sbjct: 213 PGREASCEGTLRAVDPPVRHHSYGRHE-----------GAWMKDP---AAKDDKIYVTNY 258

Query: 603 SDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSS 662
                L E+++ + FK    S  Y L   + G  HVV+  +FYY++ F+ +I+++DL   
Sbjct: 259 YYGNSLVEFRNLENFKQGRWSNMYKLPYNWIGTGHVVYQGAFYYNRAFTKNIIKYDLRQR 318

Query: 663 KIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWVIYGLSNNN-------TAVTKLD 713
            + +   L  V  +        G++ +DF++DE+GLWVIY  +++          +++LD
Sbjct: 319 FVASWALLPDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPAADDRDEAQPEVIVLSRLD 378

Query: 714 TATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSL 771
              L +  + TW   L     G+ F+VCG+LY VD+   R  ++ +A D +      + L
Sbjct: 379 PGDLSVHRETTWKTRLRRNSYGNCFLVCGILYAVDTYNQREGHVAYAFDTHTGADARLQL 438

Query: 772 NFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
            F N    TT I YN + + LY WD G+ LTY + +
Sbjct: 439 PFLNEHAYTTQIDYNPKERVLYAWDNGHQLTYTLHF 474


>gi|160419009|sp|A2BD09.2|OLM2A_PIG RecName: Full=Olfactomedin-like protein 2A
          Length = 607

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 135/276 (48%), Gaps = 27/276 (9%)

Query: 545 PNRTLDCQ--VYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEKFWMTTD 602
           P R   C+  + AV  PV H S    +           GAWMKDP   +   +K ++T  
Sbjct: 344 PGREASCEGTLRAVDPPVRHHSYGRHE-----------GAWMKDP---AAKDDKIYVTNY 389

Query: 603 SDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSS 662
                L E+++ + FK    S  Y L   + G  HVV+  +FYY++ F+ +I+++DL   
Sbjct: 390 YYGNSLVEFRNLENFKQGRWSNMYKLPYNWIGTGHVVYQGAFYYNRAFTKNIIKYDLRQR 449

Query: 663 KIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWVIYGLSNNN-------TAVTKLD 713
            + +   L  V  +        G++ +DF++DE+GLWVIY  +++          +++LD
Sbjct: 450 FVASWALLPDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPAADDRDEAQPEVIVLSRLD 509

Query: 714 TATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSL 771
              L +  + TW   L     G+ F+VCG+LY VD+   R  ++ +A D +      + L
Sbjct: 510 PGDLSVHRETTWKTRLRRNSYGNCFLVCGILYAVDTYNQREGHVAYAFDTHTGADARLQL 569

Query: 772 NFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
            F N    TT I YN + + LY WD G+ LTY + +
Sbjct: 570 PFLNEHAYTTQIDYNPKERVLYAWDNGHQLTYTLHF 605


>gi|387017438|gb|AFJ50837.1| Olfactomedin-like protein 2B-like [Crotalus adamanteus]
          Length = 759

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 124/237 (52%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       E+ ++T       L E+++ D F+    S +Y L   + G  H VF
Sbjct: 524 GAWMKDP---VAKDERIYVTNYYYGNTLVEFRNLDSFRQGRWSNSYKLPYSWMGTGHAVF 580

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N S YY++ F+ +++++DL    +     L  V  +        G++ +DF++DENGLW+
Sbjct: 581 NGSLYYNRAFTRNLIKYDLKQRYVAAWAMLHDVAYEEETPWRWRGHSDVDFAVDENGLWI 640

Query: 699 IYGLSNNNT------AVTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY   N ++       ++KL+   L    + TW   L     G+ FV+CGVLY VDS   
Sbjct: 641 IYPAINYDSFNQEVIVLSKLNAMDLSTRKETTWQTGLRKNFYGNSFVICGVLYAVDSYNK 700

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           RN NI +A D + N  +   L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 701 RNANISYAFDTHTNTQIIPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYNVIF 757


>gi|327291492|ref|XP_003230455.1| PREDICTED: olfactomedin-like protein 2A-like [Anolis carolinensis]
          Length = 683

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 144/291 (49%), Gaps = 36/291 (12%)

Query: 535 PLGNVSSKGLPNRTLDCQ----VYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPT 590
           P G       PNR  + +    + AV +PV       K+ S G+      GAWMKDP   
Sbjct: 409 PTGITEGPATPNRVREAECEGTLEAVEEPV-------KQHSYGRNE----GAWMKDP--- 454

Query: 591 SGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKF 650
           +   ++ ++T       L E+++ + FK    S  Y L   + G  HVVF  +FYY++ F
Sbjct: 455 AAKDDRIYVTNYYYGNSLVEFRNLENFKQGRWSNLYKLPYNWIGTGHVVFQGAFYYNRAF 514

Query: 651 SNSIVQFDL------GSSKIINIVNLSTVDPNIKLYKTGYNVMDFSLDENGLWVIYGLSN 704
           + +I+++DL        S + ++V + T     +    G++ +DF++DE+GLWVIY  ++
Sbjct: 515 TKNIIKYDLRQRFVAAWSMLHDVVYVDTTPWKWR----GHSDIDFAVDESGLWVIYPAAD 570

Query: 705 NN------TAVTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIR 756
            +        V+KLD   L +  + TW   L     G+ FV+CG++Y VD    +   + 
Sbjct: 571 YDYTQQEVIVVSKLDPGDLSVRKESTWKTGLKRNSYGNCFVICGIIYAVDEYNTKEGQVV 630

Query: 757 FALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           +A D + +      L F N F  TT I YN + K LY WD G+ +TY +R+
Sbjct: 631 YAYDTHTDTEANPKLPFINEFAFTTQIDYNPKEKVLYAWDNGHQVTYRLRF 681


>gi|113671158|ref|NP_001038314.1| olfactomedin-like 2Ba precursor [Danio rerio]
          Length = 883

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 130/243 (53%), Gaps = 15/243 (6%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP       +K ++T      +L E+++ D+FK    + +Y L   + G  HVV+
Sbjct: 642 GAWMKDP---LDQDDKIYVTNYYYGNNLLEFRNIDVFKQGRFTNSYKLPYNWIGTGHVVY 698

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV---DPNIKLYK-TGYNVMDFSLDENGL 696
             +FYY++ FS  I++FDL    +     L      + ++  ++  G + MD ++DE+GL
Sbjct: 699 KGAFYYNRAFSRDIIKFDLRLRYVAAWTMLHDAVFENDDVSSWRWRGNSDMDLAIDESGL 758

Query: 697 WVIY------GLSNNNTAVTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSV 748
           WVIY      G       +++L+   L +  + TW   L   + G+ F+VCGVLY  DS 
Sbjct: 759 WVIYPALDDEGFLQEVIVLSRLNPTDLSMKRETTWRTGLRRNRYGNCFIVCGVLYATDSY 818

Query: 749 TDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYH 808
             ++TN+ +A D + N  +   L F+N +T  T I YN + + LY WD G+ +TY +++ 
Sbjct: 819 NQQDTNLSYAFDTHTNTQVIPHLPFSNNYTYVTQIDYNPKERVLYAWDNGHQVTYNVQFA 878

Query: 809 EID 811
            +D
Sbjct: 879 YVD 881


>gi|270001953|gb|EEZ98400.1| hypothetical protein TcasGA2_TC000865 [Tribolium castaneum]
          Length = 438

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 118/200 (59%), Gaps = 21/200 (10%)

Query: 283 LLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDS- 341
           +++PP I+      +S+ +VVREG NV LRC ATG P+P+I W+    + I LG+ ++  
Sbjct: 140 VVVPPDILDYP---TSTDMVVREGSNVSLRCAATGSPEPTIAWRREGGESIPLGNGQEVP 196

Query: 342 AVASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRT 386
           ++  +T N +++NR++MG Y+C+A N                PP I I+N+ VG   G+ 
Sbjct: 197 SIDGTTFNISKVNRLHMGPYLCIASNGVPPSVSKRIMLRVHFPPMIWIQNQLVGAMEGQQ 256

Query: 387 ATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446
            TLEC  EA+P S+ YW   DG +I  +G KY    VD  +Y+  M+L I +V+ +D+ +
Sbjct: 257 ITLECHSEAYPRSINYWTMDDGNIIS-EGAKYEPVLVD-NAYKVHMKLTIRSVSFADYGS 314

Query: 447 YRCISKNEVDIAKGSLILFE 466
           Y+C++KN +    G++ L+ 
Sbjct: 315 YKCVAKNSLGETDGTIKLYH 334


>gi|345326138|ref|XP_001509308.2| PREDICTED: olfactomedin-like 2A [Ornithorhynchus anatinus]
          Length = 663

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 123/241 (51%), Gaps = 21/241 (8%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP   +   +K ++T      +L E+++ D FK    S  Y L   + G  HVVF
Sbjct: 428 GAWMKDP---TARDDKIYVTNYYYGNNLVEFRNLDNFKQGRWSNLYKLPYNWIGTGHVVF 484

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT------GYNVMDFSLDEN 694
             +FYY++ F+ +I+++DL    +     L    P++    T      G++ +DF++DE+
Sbjct: 485 RGAFYYNRAFTKNIIKYDLRQRFVAAWTQL----PDVVYEDTTPWKWRGHSDIDFAVDES 540

Query: 695 GLWVIY-----GLSNNNTAV-TKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVD 746
           GLWVIY       S     V ++LD A L +  + TW   L     G+ F+VCG+LY VD
Sbjct: 541 GLWVIYPSVDYDFSQQEVIVLSRLDPADLSVRRETTWKTRLRRNSYGNCFLVCGILYAVD 600

Query: 747 SVTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR 806
               R   I +A D + N  +   L+F N    TT I YN + K LY WD G+ + Y + 
Sbjct: 601 VYNQREGQISYAFDTHTNTEVNPKLSFLNEHAYTTQIDYNPKEKVLYAWDNGHQVIYNLH 660

Query: 807 Y 807
           +
Sbjct: 661 F 661


>gi|397495199|ref|XP_003818447.1| PREDICTED: collagen alpha-1(VII) chain [Pan paniscus]
          Length = 2944

 Score =  133 bits (334), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 74/151 (49%), Positives = 92/151 (60%), Gaps = 7/151 (4%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKGDMGYP 169
            P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD G+RGP+G  G  
Sbjct: 2491 PRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDK 2550

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP+G  GD G +G KG+ G  G  GL G  GLPG        G+ G  GIPG  G PGKD
Sbjct: 2551 GPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLPGP------QGQPGAAGIPGDPGSPGKD 2604

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G  G+ G  GPRG +G+ G+ G  G
Sbjct: 2605 GVPGIRGEKGDVGFMGPRGLKGERGVKGACG 2635



 Score =  122 bits (306), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 76/171 (44%), Positives = 96/171 (56%), Gaps = 21/171 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQG------IPGDEG 158
            E  P GL G  G +G+ G  G+ G KGE G+KG+   PG+ G PGPQG      IPGD G
Sbjct: 2540 ERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLPGPQGQPGAAGIPGDPG 2599

Query: 159  K---------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
                      RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G PG PGL G
Sbjct: 2600 SPGKDGVPGIRGEKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGPPGRPGLAG 2656

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G  G PG
Sbjct: 2657 HKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 2707



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 69/177 (38%), Positives = 84/177 (47%), Gaps = 35/177 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDM 166
            G+ G  G+KG++G  G  G+KGERG KGA G+       G  GP G PG  G +G  G+ 
Sbjct: 2605 GVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEP 2664

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG-------------- 212
            G PG  G PG EG  GPKGD G+ G+ G  G  G  GE G  GI G              
Sbjct: 2665 GVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIRGFQGPSGNDGSAGPP 2724

Query: 213  ----------RNGMDGIPGKDGLPGK-----DGIPGTNGTNGEKGMTGPRGNRGKSG 254
                        G+ G  G+ G PG+      G PG  G  GE+G  GP G RG+ G
Sbjct: 2725 GPPGSVGPRGPEGLQGQKGERGPPGERVVGDPGAPGAPGERGEQGRPGPAGPRGEKG 2781



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 69/154 (44%), Positives = 85/154 (55%), Gaps = 14/154 (9%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
            GL G  G KGE G  G  G+ G +GE G PGV   PG  G PG EG  GPKGD G+   P
Sbjct: 2635 GLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGV---PGQSGAPGKEGLIGPKGDRGFDGQP 2691

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------DGIPGRNGMDGIPGKD 223
            GP+G  G++G+RG  G  G+ G  G DG  G PG PG       +G+ G+ G  G PG+ 
Sbjct: 2692 GPKGDQGEKGERGTPGIRGFQGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGER 2751

Query: 224  --GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
              G PG  G PG  G  G  G  GPRG +G++ +
Sbjct: 2752 VVGDPGAPGAPGERGEQGRPGPAGPRGEKGEAAL 2785



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 65/138 (47%), Positives = 74/138 (53%), Gaps = 2/138 (1%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            KGE G   E G  G PG  G PG QG  G  G  GPKGD G+PGP G  G++G+RGP G 
Sbjct: 1444 KGEKG-DSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGP 1502

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  GP
Sbjct: 1503 AGSRGLPGVAGRPGAKGPEGPPGPIGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDVGP 1561

Query: 247  RGNRGKSGINGVPGTPAI 264
             G RG +G+ G  G P +
Sbjct: 1562 AGPRGATGVQGERGPPGL 1579



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 68/176 (38%), Positives = 87/176 (49%), Gaps = 23/176 (13%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
            P G  G  G  G+ G+ G+ GV G RGEKG  G +GP    G +G+ G  G  G KGD G
Sbjct: 2585 PQGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKG 2644

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDG 224
              GP G PG  G +G  G+ G PG+ G  G++GL    G+ G DG PG  G  G  G+ G
Sbjct: 2645 EAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERG 2704

Query: 225  LPGKDGIPGTNGTN---------------GEKGMTGPRGNRGKSG--INGVPGTPA 263
             PG  G  G +G +               G +G+ G +G RG  G  + G PG P 
Sbjct: 2705 TPGIRGFQGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGDPGAPG 2760



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 72/206 (34%), Positives = 86/206 (41%), Gaps = 56/206 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G  G  GAKGE G  G++G KG  GV   PG +G  G+ G RG  G+ G PG 
Sbjct: 2101 PGLSGEQGPPGLKGAKGEPGSDGDQGPKGDRGV---PGIKGDRGEPGPRGQDGNPGLPGE 2157

Query: 172  QGIPGDEGK---------------------------------RGPKGDMGYPGRIGLDGR 198
            +G+ G EGK                                 +GP G  G PG  G  GR
Sbjct: 2158 RGVAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGFAGPAGPQGPSGLKGEPGETGPPGR 2217

Query: 199  --------------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                 G  G PGL G  G  G  G PG+DG  GKDG  G+ G  
Sbjct: 2218 GLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVP 2277

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+ GP G +G+ G  G PG   +
Sbjct: 2278 GSPGLPGPVGPKGEPGPTGAPGQAVV 2303



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 81/225 (36%), Positives = 93/225 (41%), Gaps = 82/225 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                    PG   
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGARE 1717

Query: 151  QGIPGD---EGKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPG- 191
            +G PGD   EG RGPKGD G PG  G  G EG R               G KGD G PG 
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGLRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777

Query: 192  --RIGLDG---------------------RDGLPGEPG------------------LDGI 210
              R GLDG                     RDGLPG  G                   DG 
Sbjct: 1778 DGRSGLDGKPGAPGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGK 1837

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            PG NG +G PG  G  G+ G  G +G +G +G  GP+G RG  GI
Sbjct: 1838 PGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGI 1882



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 69/178 (38%), Positives = 83/178 (46%), Gaps = 33/178 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRGPKGD 165
            G QGP G++G IG  GE G+KG+RG+ G       A G  GPPGP G+ G+ GK G    
Sbjct: 1985 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIP-- 2042

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL-----------------------P 202
             G PG  G  G+ G+ G +G+ G  G  G  GRDG                        P
Sbjct: 2043 -GLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGP 2101

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G PG  G  G PG DG  G  G  G  G  G++G  GPRG  G  G+ G  G
Sbjct: 2102 GLSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERG 2159



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 80/233 (34%), Positives = 91/233 (39%), Gaps = 94/233 (40%)

Query: 122  GEIGAKGEMGVK---------GERGEKGAPGVVGPPGPQGIPGD---------------- 156
            GE+G KG+ G           GERG +GAPGV GP G +G  GD                
Sbjct: 1634 GEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPK 1693

Query: 157  ---------------------------------EGKRGPKGDMGYPGPQGIPGDEG---- 179
                                             EG RGPKGD G PG  G  G EG    
Sbjct: 1694 GDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGLRGP 1753

Query: 180  --------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG- 227
                     RGP G+ G  G  GLDGR GL G+PG  G  G NG  G    PG+DGLPG 
Sbjct: 1754 PGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAPGPSGPNGAAGKAGDPGRDGLPGL 1813

Query: 228  --------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                                +DG PG NG NGE G  G  G +G+ G +G  G
Sbjct: 1814 RGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASG 1866



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 77/245 (31%), Positives = 95/245 (38%), Gaps = 93/245 (37%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
            P + GP G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD             
Sbjct: 1547 PAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1606

Query: 157  --------------------------EGKRGPKGD---------MGYPGPQGIPGDEGKR 181
                                      +G+ G KGD          G  G +G+ G  G R
Sbjct: 1607 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666

Query: 182  GPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGLDGI 210
            GP G+ G  G  G DGR+G P                               GEPG  G 
Sbjct: 1667 GPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQ 1726

Query: 211  PGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGINGV 258
             G  G  G PG  G PG+ GI G              G  GEKG  GP G  G+SG++G 
Sbjct: 1727 EGPRGPKGDPGLPGAPGERGIEGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGK 1786

Query: 259  PGTPA 263
            PG P 
Sbjct: 1787 PGAPG 1791



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 71/193 (36%), Positives = 83/193 (43%), Gaps = 52/193 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++G+P         G VGP   PGP G PG    
Sbjct: 2244 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2303

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG  G+ GD  G+ G KGD G PG  G  G  G  GEP   G PG +G 
Sbjct: 2304 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP---GDPGEDGQ 2358

Query: 217  DGIPGKDGLPG--------------------------------KDGIPGTNGTNGEKGMT 244
             G PG  G  G                                  G PG  G  GE G  
Sbjct: 2359 KGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGPPGAPGVVGFPGQTGPRGEMGQP 2418

Query: 245  GPRGNRGKSGING 257
            GP G RG +G  G
Sbjct: 2419 GPSGERGLAGPPG 2431



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 71/205 (34%), Positives = 85/205 (41%), Gaps = 72/205 (35%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--------------- 157
            GL GP G+KGE G  GE G  GE G+KGA      PGP+G  GD                
Sbjct: 2333 GLPGPRGEKGEAGRAGEPGDPGEDGQKGA------PGPKGFKGDPGVGVPGSPGPPGPPG 2386

Query: 158  --------------------GKRGPKGDMGYPGP---QGIPGDEGKR------------- 181
                                G+ GP+G+MG PGP   +G+ G  G+              
Sbjct: 2387 VKGDLGLPGPPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPG 2446

Query: 182  --------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                    G KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG
Sbjct: 2447 SVGPPGASGLKGDKGDPGA-------GLPGPQGERGEPGIRGEDGRPGQEGPRGLTGPPG 2499

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGV 258
            + G  GEKG  G  G +G  G + V
Sbjct: 2500 SRGERGEKGDVGSAGLKGDKGDSAV 2524



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 75/227 (33%), Positives = 93/227 (40%), Gaps = 81/227 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ-------------------- 151
            PG  G  G+KG+ GA G  G  G +GE+GAPG++GP GP                     
Sbjct: 1850 PGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGT 1909

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------------------- 179
            G  GD G+ G KG+ G PG +G+ G+ G                                
Sbjct: 1910 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 1969

Query: 180  -------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------------GIPGR 213
                   +RGPKGD G  G  G +G  G PGE GL                    G PG 
Sbjct: 1970 FLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2029

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +G+ G PGK G+P   G+PG  G  GE G  G RG RG+ G  G  G
Sbjct: 2030 SGLAGEPGKPGIP---GLPGRAGGVGEAGRPGERGERGEKGERGEQG 2073



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 69/162 (42%), Positives = 75/162 (46%), Gaps = 12/162 (7%)

Query: 108  EYCPPG--LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            E  PPG  L GP G  G  G  G  G+ G +G  G PG VG  G  G PG +G  G  GD
Sbjct: 2211 ETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGD 2270

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIPGRNGMD-----G 218
             G PG  G PG  G  GPKG+   PG  G  G+   GLPG  G  G PG    D     G
Sbjct: 2271 RGSPGVPGSPGLPGPVGPKGE---PGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPG 2327

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  GLPG  G  G  G  GE G  G  G +G  G  G  G
Sbjct: 2328 AKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKG 2369



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 88/215 (40%), Gaps = 65/215 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---------------------------------K 139
            G  GP GQ G  G  GE GV G  G+                                 +
Sbjct: 2141 GEPGPRGQDGNPGLPGERGVAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGFAGPAGPQ 2200

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGPKGDMGYP 190
            G  G+ G PG  G PG  G  GP G +         G  GPQG PG  G+ G  G  G P
Sbjct: 2201 GPSGLKGEPGETGPPG-RGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAP 2259

Query: 191  GRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTN---------- 235
            GR G  G+D   G PG PG  G+PG  G  G PG  G PG+   G+PG            
Sbjct: 2260 GRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLA 2319

Query: 236  -------GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                   G  G++G+ GPRG +G++G  G PG P 
Sbjct: 2320 GDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2354



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 73/247 (29%), Positives = 85/247 (34%), Gaps = 99/247 (40%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------------------ 145
            GP G +GE G+KGE G+ GERG +G PG V                              
Sbjct: 1910 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 1969

Query: 146  ------------------GPPGPQGIPGDEGKRGPKGDMGY------------------- 168
                              GPPG +G  G  G+RG KGD G                    
Sbjct: 1970 FLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2029

Query: 169  ------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------- 208
                  PG  GIPG  G+ G  G+ G PG  G  G  G  GE G D              
Sbjct: 2030 SGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGP 2089

Query: 209  ------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                        G+ G  G  G+ G  G PG DG  G  G  G  G+ G RG  G  G +
Sbjct: 2090 PGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQD 2149

Query: 257  GVPGTPA 263
            G PG P 
Sbjct: 2150 GNPGLPG 2156



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 71/161 (44%), Gaps = 29/161 (18%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG  G  GP+G  G +
Sbjct: 2629 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2688

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGP---------------------------KGDMGYP 190
            G+ GPKGD G  G +G PG  G +GP                           KG+ G P
Sbjct: 2689 GQPGPKGDQGEKGERGTPGIRGFQGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPP 2748

Query: 191  GR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G   +G  G  G PGE G  G PG  G  G  G+  L   D
Sbjct: 2749 GERVVGDPGAPGAPGERGEQGRPGPAGPRGEKGEAALTEDD 2789



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 67/160 (41%), Positives = 81/160 (50%), Gaps = 11/160 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP G+ G+ G  GE G+ G  G +G PG +GPPGP G  G  G  G KGD G PG 
Sbjct: 2406 PGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGA 2465

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------- 224
             G+PG +G+RG  G  G  GR G +G  GL G PG  G  G  G  G  G  G       
Sbjct: 2466 -GLPGPQGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAV 2524

Query: 225  ---LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                PG  G  G  G  G +G+ G +G RG +G  G  G+
Sbjct: 2525 ILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGS 2564



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 88/180 (48%), Gaps = 29/180 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL+GP G +G+ G +G  G KG+RG  G  G  G  G  G PG  G  G  G  G PG  
Sbjct: 1749 GLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAPGPSGPNGAAGKAGDPGRD 1808

Query: 173  GIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLDGIPGR---NGMDGIP 220
            G+PG  G++G  G  G P         G+ GL+G++G PG+PG DG  G    +G  G  
Sbjct: 1809 GLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGRE 1868

Query: 221  GKDGLPGKDGIPG-----------------TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+DG  G+ G PG                   G  G  G TGP+G+RG++G  G  G P 
Sbjct: 1869 GRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLPG 1928



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 27/119 (22%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1250 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGR 1306

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG++G RGPKG+ G PG++      GLPG
Sbjct: 1307 PGSPGRPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEPGAPGQVIGGEGPGLPG 1365



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 71/238 (29%), Positives = 92/238 (38%), Gaps = 78/238 (32%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G   S  E  P G  G IG KG+ G  G +G  GE+GE+G P   GP G +G+PG  
Sbjct: 1456 GLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP---GPAGSRGLPGVA 1512

Query: 158  G---------------KRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYPG 191
            G               ++G KG+ G P           GP+G  GD G  GP+G  G  G
Sbjct: 1513 GRPGAKGPEGPPGPIGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQG 1572

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK----------------------------- 222
              G  G   LPG+PG  G PG  G  G+ G+                             
Sbjct: 1573 ERGPPGL-VLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRG 1631

Query: 223  -DG------------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             DG                    G+ G+ G  G  G  G  G +G+ G+ G NG PG+
Sbjct: 1632 RDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGS 1689



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 78/293 (26%), Positives = 92/293 (31%), Gaps = 137/293 (46%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPGPQGIPGDE 157
            E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG  GIPG  
Sbjct: 1986 EQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLP 2045

Query: 158  GKRGPKGDMGYPG----------------------------------------------- 170
            G+ G  G+ G PG                                               
Sbjct: 2046 GRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSG 2105

Query: 171  ---PQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
               P G+                GD G  G KGD G PG  G DG  GLPGE G+ G  G
Sbjct: 2106 EQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGVAGPEG 2165

Query: 213  R------------------------------------NGMDGIPGKDGLPGKD------- 229
            +                                    +G+ G PG+ G PG+        
Sbjct: 2166 KPGLQGPRGPPGPVGGHGDPGPPGAPGFAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGA 2225

Query: 230  -------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                               G+PG  G  G+ G  G  G  GK G  G PG P 
Sbjct: 2226 VGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPG 2278



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/117 (42%), Positives = 55/117 (47%)

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            V  P G +G PG+ G RG  G  G PG  G  G  G +GP G     G  G  G DG PG
Sbjct: 1249 VYCPKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPG 1308

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG  G PG  G  G+ G  GLPG  G PG  G  G KG  G  G        G+PG
Sbjct: 1309 SPGRPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEPGAPGQVIGGEGPGLPG 1365



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/127 (41%), Positives = 64/127 (50%), Gaps = 11/127 (8%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E CP  +  P GQKGE    GEMG++G+ G  G PG+ G  G  G  G  G    KG+ G
Sbjct: 1245 EPCP--VYCPKGQKGE---PGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERG 1299

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK----- 222
            +PG  G PG  G+ G  G  G PG  G  G  G  G+PG  G  G  G  G PG+     
Sbjct: 1300 FPGADGRPGSPGRPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEPGAPGQVIGGE 1359

Query: 223  -DGLPGK 228
              GLPG+
Sbjct: 1360 GPGLPGR 1366



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/114 (35%), Positives = 46/114 (40%), Gaps = 33/114 (28%)

Query: 183  PKGDMGYPGRIGLDGR------------------------------DGLPGEPGLDGIPG 212
            PKG  G PG +GL G+                               G PG  G  G PG
Sbjct: 1252 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPG 1311

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG--INGV-PGTPA 263
            R G  G PG  GL G  G+PG  G  GE+G  GP+G  G  G  I G  PG P 
Sbjct: 1312 RPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEPGAPGQVIGGEGPGLPG 1365


>gi|355559663|gb|EHH16391.1| hypothetical protein EGK_11665, partial [Macaca mulatta]
          Length = 2940

 Score =  132 bits (333), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 75/151 (49%), Positives = 92/151 (60%), Gaps = 7/151 (4%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKGDMGYP 169
            P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD G+RGP+G  G  
Sbjct: 2491 PRGLTGPPGSRGERGEKGDVGTAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGEK 2550

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP+G  GD G +G KG+   PG  G  G  GL G PG  G P   G  GIPG  G PGKD
Sbjct: 2551 GPRGDSGDPGDKGSKGE---PGDKGSAGSPGLRGLPGPQGQP---GAAGIPGDPGSPGKD 2604

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G  G+ G  GPRG +G+ G+ G  G
Sbjct: 2605 GVPGIRGGKGDVGFMGPRGLKGERGVKGACG 2635



 Score =  122 bits (307), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 72/163 (44%), Positives = 92/163 (56%), Gaps = 18/163 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGK------- 159
            G +GP G  G+ G KG  G  G++G  G+PG+ G PGPQG      IPGD G        
Sbjct: 2548 GEKGPRGDSGDPGDKGSKGEPGDKGSAGSPGLRGLPGPQGQPGAAGIPGDPGSPGKDGVP 2607

Query: 160  --RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
              RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G PG PGL G  G  G  
Sbjct: 2608 GIRGGKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEP 2664

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G  G PG
Sbjct: 2665 GVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 2707



 Score =  112 bits (279), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 79/204 (38%), Positives = 94/204 (46%), Gaps = 55/204 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------GP----QGIPG 155
            PG++GP+G+KG  G  G  G  G  G  G+ G  G P            GP    +G PG
Sbjct: 1663 PGVRGPVGEKGNQGDPGADGQNGSPGPSGSKGDRGEPSSHWPFPPQVDIGPGAREKGEPG 1722

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGLDGRDG 200
            D G+ GP+G  G PG  G PGD G                RGP G+ G  G  GLDGR G
Sbjct: 1723 DRGQEGPRGPKGDPGLPGAPGDRGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSG 1782

Query: 201  LPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------KDGIPGTNG 236
            L G+PG  G PG NG  G    PG+DGLPG                     +DG PG NG
Sbjct: 1783 LDGKPGASGPPGLNGAAGKAGDPGRDGLPGLRGEQGPPGPSGSPGLPGKPGEDGKPGLNG 1842

Query: 237  TNGEKGMTGPRGNRGKSGINGVPG 260
              GE G  G  G +G+ G +G PG
Sbjct: 1843 KKGEPGDPGEDGRKGEKGDSGAPG 1866



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 65/138 (47%), Positives = 74/138 (53%), Gaps = 2/138 (1%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            KGE G   E G  G PG  G PG QG  G  G  GPKGD G+PGP G  G++G+RGP G 
Sbjct: 1444 KGEKG-DSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGP 1502

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  GP
Sbjct: 1503 AGSRGLPGVAGRPGAEGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDVGP 1561

Query: 247  RGNRGKSGINGVPGTPAI 264
             G RG +G+ G  G P +
Sbjct: 1562 AGPRGATGVQGERGAPGL 1579



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 66/141 (46%), Positives = 75/141 (53%), Gaps = 9/141 (6%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG  G      P G PG  G +G  G+ G PG  
Sbjct: 2617 GFMGPRGLKGERGVKGACGLDGEKGDKGEAG------PPGRPGLAGHKGEMGEPGVPGQS 2670

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKD 229
            G PG EG  GPKGD G+ G+ G  G  G  GE   PG+ G PG  G DG  G  G PG  
Sbjct: 2671 GAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPRGSDGSAGSPGPPGGV 2730

Query: 230  GIPGTNGTNGEKGMTGPRGNR 250
            G  G  G  G+KG  GP G R
Sbjct: 2731 GPRGPEGLQGQKGERGPPGER 2751



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 80/247 (32%), Positives = 102/247 (41%), Gaps = 83/247 (33%)

Query: 112  PGLQGPIGQKGEIGAKGE-----MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PGL GP+G KGE G  G      +G+ G +GEKGAPG     +VG PG +G  G  G RG
Sbjct: 2280 PGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRG 2339

Query: 162  PKGDMGYPGPQGIPGDEGKR---GPKGDMG------------------------------ 188
             KG+ G  G  G PG++G++   GPKG  G                              
Sbjct: 2340 EKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGLPGPPGVKGDLGLPGPPGA 2399

Query: 189  -----YPGRIGLDGRDGLP---GEPGLDGIPGRN-------------------------- 214
                 +PG+ G  G  G P   GE GL G PGR                           
Sbjct: 2400 PGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPGPPGSVGPPGASGLKGD 2459

Query: 215  ------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                  G+ G  G+ G PG  G  G  G  G +G+TGP G+RG+ G  G  GT  +   K
Sbjct: 2460 KGDPGAGLPGPRGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGTAGLKGDK 2519

Query: 269  RESCSLL 275
             +S  +L
Sbjct: 2520 GDSAVIL 2526



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 85/206 (41%), Gaps = 56/206 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            P L G  G  G  GAKGE G  G+RG KG  GV   PG +G  G+ G RG  G++G PG 
Sbjct: 2101 PALSGEQGPPGLKGAKGEPGSDGDRGPKGDRGV---PGIKGDRGEPGPRGQDGNLGLPGE 2157

Query: 172  QGIPGDEGK---------------------------------RGPKGDMGYPGRIGLDGR 198
            +G+ G EGK                                 +GP G  G PG  G  GR
Sbjct: 2158 RGVAGPEGKPGLQGPRGPPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGR 2217

Query: 199  DGLP--------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                    G PGL G  G  G  G PG+DG  GKDG  G+ G  
Sbjct: 2218 GLPGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGAGGKDGDRGSPGVP 2277

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+ GP G +G+ G  G PG   +
Sbjct: 2278 GSPGLPGPVGPKGEPGPTGAPGQAVV 2303



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 71/201 (35%), Positives = 89/201 (44%), Gaps = 48/201 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRG-------- 161
            P + GP G+KG++G  G  G  G +GE+GAPG+V  G PGP+G PGD G  G        
Sbjct: 1547 PAVAGPKGEKGDVGPAGPRGATGVQGERGAPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1606

Query: 162  -------PKGDMGYP------------GPQGIPGDE------------GKRGPKGDMGYP 190
                    KGD G              G  G  GDE            G+RG +G  G  
Sbjct: 1607 GDSGPPGEKGDPGRSGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL-----PGKDGIPGT--NGTNGEKGM 243
            G +G  G  G PG  G +G PG +G  G  G+        P  D  PG    G  G++G 
Sbjct: 1667 GPVGEKGNQGDPGADGQNGSPGPSGSKGDRGEPSSHWPFPPQVDIGPGAREKGEPGDRGQ 1726

Query: 244  TGPRGNRGKSGINGVPGTPAI 264
             GPRG +G  G+ G PG   I
Sbjct: 1727 EGPRGPKGDPGLPGAPGDRGI 1747



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 70/133 (52%), Gaps = 13/133 (9%)

Query: 136  RGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            +G  G PG VG  G  G PG +G   K G +G  G PG  G+PG  G +G  G  G PG+
Sbjct: 2241 QGSPGLPGQVGETGKPGAPGRDGAGGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQ 2300

Query: 193  --IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKG 242
              +GL G  G  G PG     L G PG  G  G+P   G+ G  G+ G PG  G +G+KG
Sbjct: 2301 AVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKG 2360

Query: 243  MTGPRGNRGKSGI 255
              GP+G +G  G+
Sbjct: 2361 APGPKGFKGDPGV 2373



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 68/162 (41%), Positives = 81/162 (50%), Gaps = 14/162 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +GP G  G  G  G+ G  G  G  GA G  G PG  G+PG  G++GP G  G PG  
Sbjct: 1770 GDRGPPGLDGRSGLDGKPGASGPPGLNGAAGKAGDPGRDGLPGLRGEQGPPGPSGSPGLP 1829

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG----- 227
            G PG++GK G  G  G PG  G DGR    GE G  G PGR G DG  G+ G+PG     
Sbjct: 1830 GKPGEDGKPGLNGKKGEPGDPGEDGRK---GEKGDSGAPGREGRDGPKGEHGVPGILGPQ 1886

Query: 228  ------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                      P   G  G  G TGP+G+RG++G  G  G P 
Sbjct: 1887 GPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLPG 1928



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 74/247 (29%), Positives = 90/247 (36%), Gaps = 88/247 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G+ G  G +GE G KGERGE+G                           P + 
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGSPGLPGPPGPKVSVDGPGPALS 2104

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG +G RGPKGD G PG +G  G+ G RG  G++G PG  G+ G +
Sbjct: 2105 GEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDRGEPGPRGQDGNLGLPGERGVAGPE 2164

Query: 200  G---------------------------------LPGEPGLDGIPGRNGMDGIP------ 220
            G                                   G  GL G PG  G  G        
Sbjct: 2165 GKPGLQGPRGPPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTG 2224

Query: 221  -----------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                             G  GLPG+ G  G  G  G  G  G  G+RG  G+ G PG P 
Sbjct: 2225 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGAGGKDGDRGSPGVPGSPGLPG 2284

Query: 264  ICAYKRE 270
                K E
Sbjct: 2285 PVGPKGE 2291



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 75/227 (33%), Positives = 86/227 (37%), Gaps = 85/227 (37%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGER---------------------------------G 137
            PPG  GP G +G  G  GE G KGER                                 G
Sbjct: 1472 PPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAEGPEGPPGPTGRQG 1531

Query: 138  EKGAPG------VVGP--PGPQGIPGDEGKRGPKGDMGYPGPQGIPG--DEGKRGPKGDM 187
            EKG PG      VVGP   GP+G  GD G  GP+G  G  G +G PG    G  GPKGD 
Sbjct: 1532 EKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGAPGLVLPGDPGPKGDP 1591

Query: 188  GYPGRIGLDGR------------------------------DGLPGEPGLD--------- 208
            G  G IGL GR                              DG  GE G +         
Sbjct: 1592 GDRGPIGLTGRAGPPGDSGPPGEKGDPGRSGPPGPVGPRGRDGEVGEKGDEGPPGDPGLP 1651

Query: 209  ---GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
               G  G  G  G+ G  G  G  G PG +G NG  G +G +G+RG+
Sbjct: 1652 GKAGERGLRGAPGVRGPVGEKGNQGDPGADGQNGSPGPSGSKGDRGE 1698



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 60/119 (50%), Gaps = 27/119 (22%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1250 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSAIAKGERGFPGADGR 1306

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG++G RGPKG+ G PG+I      GLPG
Sbjct: 1307 PGSPGRPGTPGTPGAPGLKGSPGLPGPRGEPGEQGPRGPKGEPGAPGQITGGEGPGLPG 1365



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 66/157 (42%), Positives = 79/157 (50%), Gaps = 4/157 (2%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG  G  GP+G  G +
Sbjct: 2629 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2688

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G+ GPKGD G  G +G PG  G  GP+G  G  G  G  G  G  G  GL G  G  G  
Sbjct: 2689 GQPGPKGDQGEKGERGTPGIGGFPGPRGSDGSAGSPGPPGGVGPRGPEGLQGQKGERG-- 2746

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              P  + + G  G PG  G  GE+G  GP G RG+ G
Sbjct: 2747 --PPGERVVGAPGAPGAPGERGEQGRPGPAGPRGEKG 2781



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 58/158 (36%), Positives = 67/158 (42%), Gaps = 44/158 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
            GL G  G KGE G  G  G+ G +GE G PGV   PG  G PG EG  GPKGD G+   P
Sbjct: 2635 GLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGV---PGQSGAPGKEGLIGPKGDRGFDGQP 2691

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLD------------------------GRDGLPGEP 205
            GP+G  G++G+RG  G  G+PG  G D                        G  G PGE 
Sbjct: 2692 GPKGDQGEKGERGTPGIGGFPGPRGSDGSAGSPGPPGGVGPRGPEGLQGQKGERGPPGER 2751

Query: 206  --------------GLDGIPGRNGMDGIPGKDGLPGKD 229
                          G  G PG  G  G  G+  L   D
Sbjct: 2752 VVGAPGAPGAPGERGEQGRPGPAGPRGEKGEAALTEDD 2789



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 63/178 (35%), Positives = 82/178 (46%), Gaps = 31/178 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER----------------GEKGAPGVVGPPGPQGIPG 155
            PG +G  G++G IG  GE G+KG+R                G  G PG+ G PG  GIPG
Sbjct: 1984 PGERGSPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPG 2043

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKG-------------DMGYPGRIGLDGRDGLP 202
              G+ G  G+ G PG +G  G++G+RG +G                   ++ +DG    P
Sbjct: 2044 LPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGSPGLPGPPGPKVSVDGPG--P 2101

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G  G PG  G  G PG DG  G  G  G  G  G++G  GPRG  G  G+ G  G
Sbjct: 2102 ALSGEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDRGEPGPRGQDGNLGLPGERG 2159



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 75/282 (26%), Positives = 89/282 (31%), Gaps = 132/282 (46%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGE---------------------------RGEKGAPG 143
            PPGL G  G+ G+ G  G  G++GE                           +GE G PG
Sbjct: 1792 PPGLNGAAGKAGDPGRDGLPGLRGEQGPPGPSGSPGLPGKPGEDGKPGLNGKKGEPGDPG 1851

Query: 144  V---VGPPGPQGIPGDEGKRGPKGDMGYPG--------------------------PQGI 174
                 G  G  G PG EG+ GPKG+ G PG                            G 
Sbjct: 1852 EDGRKGEKGDSGAPGREGRDGPKGEHGVPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGP 1911

Query: 175  PGDEGKRGPKGDMGYPGRIGLDG------------------------------------- 197
             GD G+ G KG+ G PG  GL G                                     
Sbjct: 1912 KGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKVSALREIVETWDESSGSFL 1971

Query: 198  -----RDGLPGEPGLDGIPGRNGMDGIPGKDGL--------------------------- 225
                 R G  G+PG  G PG+ G  G PG+ GL                           
Sbjct: 1972 PVPERRRGPKGDPGERGSPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPG 2031

Query: 226  -------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   PG  G+PG  G  GE G  G RG RG+ G  G  G
Sbjct: 2032 LAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQG 2073



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/102 (37%), Positives = 42/102 (41%), Gaps = 27/102 (26%)

Query: 183  PKGDMGYPGRIGLDGR---------------------------DGLPGEPGLDGIPGRNG 215
            PKG  G PG +GL G+                            G  G PG DG PG  G
Sbjct: 1252 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSAIAKGERGFPGADGRPGSPG 1311

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G PG  G PG  G PG  G  GE G  GPRG +G+ G  G
Sbjct: 1312 RPGTPGTPGAPGLKGSPGLPGPRGEPGEQGPRGPKGEPGAPG 1353



 Score = 52.8 bits (125), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/123 (41%), Positives = 59/123 (47%), Gaps = 14/123 (11%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E CP  +  P GQKGE    GEMG++G+ G  G PG+ G  G  G  G  G    KG+ G
Sbjct: 1245 EPCP--VYCPKGQKGE---PGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSAIAKGERG 1299

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            +PG  G PG  G+         PG  G  G  GL G PGL G  G  G  G  G  G PG
Sbjct: 1300 FPGADGRPGSPGR---------PGTPGTPGAPGLKGSPGLPGPRGEPGEQGPRGPKGEPG 1350

Query: 228  KDG 230
              G
Sbjct: 1351 APG 1353


>gi|402860195|ref|XP_003894520.1| PREDICTED: collagen alpha-1(VII) chain [Papio anubis]
          Length = 2943

 Score =  132 bits (332), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 79/176 (44%), Positives = 98/176 (55%), Gaps = 22/176 (12%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKGDMGYP 169
            P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD G+RGP+G  G  
Sbjct: 2490 PRGLTGPPGSRGERGEKGDVGTAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDK 2549

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP+G  GD G +G KG+   PG  G  G  GL G PG  G P   G  GIPG  G PGKD
Sbjct: 2550 GPRGDSGDPGDKGSKGE---PGDKGSAGSPGLRGLPGPQGQP---GAAGIPGDPGSPGKD 2603

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGV---------------PGTPAICAYKRE 270
            G+PG  G  G+ G  GPRG +G+ G+ G                PG P +  +K E
Sbjct: 2604 GVPGIRGGKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGE 2659



 Score =  122 bits (307), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 72/163 (44%), Positives = 92/163 (56%), Gaps = 18/163 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGK------- 159
            G +GP G  G+ G KG  G  G++G  G+PG+ G PGPQG      IPGD G        
Sbjct: 2547 GDKGPRGDSGDPGDKGSKGEPGDKGSAGSPGLRGLPGPQGQPGAAGIPGDPGSPGKDGVP 2606

Query: 160  --RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
              RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G PG PGL G  G  G  
Sbjct: 2607 GIRGGKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEP 2663

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G  G PG
Sbjct: 2664 GVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 2706



 Score =  110 bits (276), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 78/204 (38%), Positives = 94/204 (46%), Gaps = 55/204 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------VGPPG-PQGIPG 155
            PG++GP+G+KG  G  G  G  G  G  G+ G                +GP    +G PG
Sbjct: 1662 PGVRGPVGEKGNQGDPGADGQNGSPGPSGSKGDRGEPGPPGLPGRLVDIGPGAREKGEPG 1721

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGLDGRDG 200
            D G+ GP+G  G PG  G PGD G                RGP G+ G  G  GLDGR G
Sbjct: 1722 DRGQEGPRGPKGDPGLPGAPGDRGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSG 1781

Query: 201  LPGEPGLDGIPGRNGMDGI---PGKDGL---------------------PGKDGIPGTNG 236
            L G+PG  G PG NG  G    PG+DGL                     PG+DG PG NG
Sbjct: 1782 LDGKPGASGPPGLNGAAGKAGDPGRDGLPGLRGEQGPPGPSGSPGLPGKPGEDGKPGLNG 1841

Query: 237  TNGEKGMTGPRGNRGKSGINGVPG 260
             NGE G  G  G +G+ G +G PG
Sbjct: 1842 KNGEPGDPGEDGRKGEKGDSGAPG 1865



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 64/138 (46%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            KGE G   E G  G PG  G PG QG  G  G  GPKGD G+PGP G  G++G+RGP G 
Sbjct: 1443 KGEKG-DSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGP 1501

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G  G  G+ GR G  G  G  G  G  G  G PG+ G P   G P   G  GEKG  GP
Sbjct: 1502 AGSRGLPGVAGRPGAEGPEGPPGPTGHQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDVGP 1560

Query: 247  RGNRGKSGINGVPGTPAI 264
             G RG +G+ G  G P +
Sbjct: 1561 AGPRGATGVQGERGAPGL 1578



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 67/166 (40%), Positives = 79/166 (47%), Gaps = 33/166 (19%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEGKRGPKGDMGYPG 170
            E G  G+ G +G RG KG PG+ G PG +GI G              G  G KGD G PG
Sbjct: 1716 EKGEPGDRGQEGPRGPKGDPGLPGAPGDRGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPG 1775

Query: 171  PQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPG------------------EPGLDG 209
              G  G +GK    GP G  G  G+ G  GRDGLPG                  +PG DG
Sbjct: 1776 LDGRSGLDGKPGASGPPGLNGAAGKAGDPGRDGLPGLRGEQGPPGPSGSPGLPGKPGEDG 1835

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             PG NG +G PG  G  G+ G  G +G  G +G  GP+G RG  GI
Sbjct: 1836 KPGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGRDGPKGERGVPGI 1881



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 66/141 (46%), Positives = 75/141 (53%), Gaps = 9/141 (6%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG  G      P G PG  G +G  G+ G PG  
Sbjct: 2616 GFMGPRGLKGERGVKGACGLDGEKGDKGEAG------PPGRPGLAGHKGEMGEPGVPGQS 2669

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKD 229
            G PG EG  GPKGD G+ G+ G  G  G  GE   PG+ G PG  G DG  G  G PG  
Sbjct: 2670 GAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPRGSDGSAGSPGPPGGV 2729

Query: 230  GIPGTNGTNGEKGMTGPRGNR 250
            G  G  G  G+KG  GP G R
Sbjct: 2730 GPRGPEGLQGQKGERGPPGER 2750



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 80/247 (32%), Positives = 103/247 (41%), Gaps = 83/247 (33%)

Query: 112  PGLQGPIGQKGEIGAKGE-----MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PGL GP+G KGE G  G      +G+ G +GEKGAPG     +VG PG +G  G  G RG
Sbjct: 2279 PGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRG 2338

Query: 162  PKGDMGYPGPQGIPGDEGKRGP------KGD----------------------------- 186
             KG+ G  G  G PG++G++G       KGD                             
Sbjct: 2339 EKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDAGVGVPGSPGLPGPPGVKGDLGLPGPPGA 2398

Query: 187  ---MGYPGRIGLDGRDGLP---GEPGLDGIPGRN-------------------------- 214
               +G+PG+ G  G  G P   GE GL G PGR                           
Sbjct: 2399 PGIVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPGPPGSVGPPGASGLKGD 2458

Query: 215  ------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                  G+ G  G+ G PG  G  G  G  G +G+TGP G+RG+ G  G  GT  +   K
Sbjct: 2459 KGDPGAGLPGPRGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGTAGLKGDK 2518

Query: 269  RESCSLL 275
             +S  +L
Sbjct: 2519 GDSAVIL 2525



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 72/206 (34%), Positives = 84/206 (40%), Gaps = 56/206 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            P L G  G  G  GAKGE G  G+RG KG  GV G  G QG PG    RG  G++G PG 
Sbjct: 2100 PALSGEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDQGEPG---PRGQDGNLGLPGE 2156

Query: 172  QGIPGDEGK---------------------------------RGPKGDMGYPGRIGLDGR 198
            +G+ G EGK                                 +GP G  G PG  G  GR
Sbjct: 2157 RGVAGPEGKPGLQGPRGPPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGR 2216

Query: 199  DGLP--------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                    G PGL G  G  G  G PG+DG  GKDG  G+ G  
Sbjct: 2217 GLPGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGAGGKDGDRGSPGVP 2276

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+ GP G +G+ G  G PG   +
Sbjct: 2277 GSPGLPGPVGPKGEPGPTGAPGQAVV 2302



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 71/133 (53%), Gaps = 13/133 (9%)

Query: 136  RGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            +G  G PG VG  G  G PG +G   K G +G  G PG  G+PG  G +G  G  G PG+
Sbjct: 2240 QGSPGLPGQVGETGKPGAPGRDGAGGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQ 2299

Query: 193  --IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKG 242
              +GL G  G  G PG     L G PG  G  G+P   G+ G  G+ G PG  G +G+KG
Sbjct: 2300 AVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKG 2359

Query: 243  MTGPRGNRGKSGI 255
              GP+G +G +G+
Sbjct: 2360 APGPKGFKGDAGV 2372



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 76/242 (31%), Positives = 94/242 (38%), Gaps = 93/242 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
            P + GP G+KG++G  G  G  G +GE+GAPG+V  G PGP+G PGD             
Sbjct: 1546 PAVAGPKGEKGDVGPAGPRGATGVQGERGAPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1605

Query: 157  --------------------------EGKRGPKGD---------MGYPGPQGIPGDEGKR 181
                                      +G+ G KGD          G  G +G+ G  G R
Sbjct: 1606 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1665

Query: 182  GPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGLDGI 210
            GP G+ G  G  G DG++G P                               GEPG  G 
Sbjct: 1666 GPVGEKGNQGDPGADGQNGSPGPSGSKGDRGEPGPPGLPGRLVDIGPGAREKGEPGDRGQ 1725

Query: 211  PGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGINGV 258
             G  G  G PG  G PG  GI G              G  GEKG  GP G  G+SG++G 
Sbjct: 1726 EGPRGPKGDPGLPGAPGDRGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGK 1785

Query: 259  PG 260
            PG
Sbjct: 1786 PG 1787



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 66/170 (38%), Positives = 84/170 (49%), Gaps = 23/170 (13%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            ++GP G+KG+   +G  G+ G  G  G PG  GPPG  G  G  G  G  G  G  G QG
Sbjct: 1761 VRGPAGEKGD---RGPPGLDGRSGLDGKPGASGPPGLNGAAGKAGDPGRDGLPGLRGEQG 1817

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDG 230
             PG  G  G  G  G  G+ GL+G++G PG+PG DG  G  G  G P   G+DG  G+ G
Sbjct: 1818 PPGPSGSPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGRDGPKGERG 1877

Query: 231  IPG-----------------TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            +PG                   G  G  G TGP+G+RG++G  G  G P 
Sbjct: 1878 VPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLPG 1927



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 74/247 (29%), Positives = 90/247 (36%), Gaps = 88/247 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G+ G  G +GE G KGERGE+G                           P + 
Sbjct: 2044 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGSPGLPGPPGPKVSVDGPGPALS 2103

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG +G RGPKGD G PG +G  G+ G RG  G++G PG  G+ G +
Sbjct: 2104 GEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDQGEPGPRGQDGNLGLPGERGVAGPE 2163

Query: 200  G---------------------------------LPGEPGLDGIPGRNGMDGIP------ 220
            G                                   G  GL G PG  G  G        
Sbjct: 2164 GKPGLQGPRGPPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTG 2223

Query: 221  -----------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                             G  GLPG+ G  G  G  G  G  G  G+RG  G+ G PG P 
Sbjct: 2224 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGAGGKDGDRGSPGVPGSPGLPG 2283

Query: 264  ICAYKRE 270
                K E
Sbjct: 2284 PVGPKGE 2290



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 60/119 (50%), Gaps = 27/119 (22%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1249 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGR 1305

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG++G RGPKG+ G PG+I      GLPG
Sbjct: 1306 PGSPGRPGTPGTPGAPGLKGSPGLPGPRGEPGEQGSRGPKGEPGAPGQITGGEGPGLPG 1364



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 66/157 (42%), Positives = 79/157 (50%), Gaps = 4/157 (2%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG  G  GP+G  G +
Sbjct: 2628 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2687

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G+ GPKGD G  G +G PG  G  GP+G  G  G  G  G  G  G  GL G  G  G  
Sbjct: 2688 GQPGPKGDQGEKGERGTPGIGGFPGPRGSDGSAGSPGPPGGVGPRGPEGLQGQKGERG-- 2745

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              P  + + G  G PG  G  GE+G  GP G RG+ G
Sbjct: 2746 --PPGERVVGAPGAPGAPGERGEQGRPGPAGPRGEKG 2780



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 75/223 (33%), Positives = 86/223 (38%), Gaps = 82/223 (36%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGER---------------------------------G 137
            PPG  GP G +G  G  GE G KGER                                 G
Sbjct: 1471 PPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAEGPEGPPGPTGHQG 1530

Query: 138  EKGAPG------VVGP--PGPQGIPGDEGKRGPKGDMGYPGPQGIPG--DEGKRGPKGDM 187
            EKG PG      VVGP   GP+G  GD G  GP+G  G  G +G PG    G  GPKGD 
Sbjct: 1531 EKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGAPGLVLPGDPGPKGDP 1590

Query: 188  GYPGRIGLDGR------------------------------DGLPGEPGLDGIP------ 211
            G  G IGL GR                              DG  GE G +G P      
Sbjct: 1591 GDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLP 1650

Query: 212  ---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
               G  G+ G PG  G  G+ G  G  G +G+ G  GP G++G
Sbjct: 1651 GKAGERGLRGAPGVRGPVGEKGNQGDPGADGQNGSPGPSGSKG 1693



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 58/158 (36%), Positives = 67/158 (42%), Gaps = 44/158 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
            GL G  G KGE G  G  G+ G +GE G PGV   PG  G PG EG  GPKGD G+   P
Sbjct: 2634 GLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGV---PGQSGAPGKEGLIGPKGDRGFDGQP 2690

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLD------------------------GRDGLPGEP 205
            GP+G  G++G+RG  G  G+PG  G D                        G  G PGE 
Sbjct: 2691 GPKGDQGEKGERGTPGIGGFPGPRGSDGSAGSPGPPGGVGPRGPEGLQGQKGERGPPGER 2750

Query: 206  --------------GLDGIPGRNGMDGIPGKDGLPGKD 229
                          G  G PG  G  G  G+  L   D
Sbjct: 2751 VVGAPGAPGAPGERGEQGRPGPAGPRGEKGEAALTEDD 2788



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 63/178 (35%), Positives = 82/178 (46%), Gaps = 31/178 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER----------------GEKGAPGVVGPPGPQGIPG 155
            PG +G  G++G IG  GE G+KG+R                G  G PG+ G PG  GIPG
Sbjct: 1983 PGERGSPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPG 2042

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKG-------------DMGYPGRIGLDGRDGLP 202
              G+ G  G+ G PG +G  G++G+RG +G                   ++ +DG    P
Sbjct: 2043 LPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGSPGLPGPPGPKVSVDGPG--P 2100

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G  G PG  G  G PG DG  G  G  G  G  G++G  GPRG  G  G+ G  G
Sbjct: 2101 ALSGEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDQGEPGPRGQDGNLGLPGERG 2158



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 75/282 (26%), Positives = 89/282 (31%), Gaps = 132/282 (46%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGER---------------------------GEKGAPG 143
            PPGL G  G+ G+ G  G  G++GE+                           GE G PG
Sbjct: 1791 PPGLNGAAGKAGDPGRDGLPGLRGEQGPPGPSGSPGLPGKPGEDGKPGLNGKNGEPGDPG 1850

Query: 144  V---VGPPGPQGIPGDEGKRGPKGDMGYPG--------------------------PQGI 174
                 G  G  G PG EG+ GPKG+ G PG                            G 
Sbjct: 1851 EDGRKGEKGDSGAPGREGRDGPKGERGVPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGP 1910

Query: 175  PGDEGKRGPKGDMGYPGRIGLDG------------------------------------- 197
             GD G+ G KG+ G PG  GL G                                     
Sbjct: 1911 KGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKVSALREIVETWDESSGSFL 1970

Query: 198  -----RDGLPGEPGLDGIPGRNGMDGIPGKDGL--------------------------- 225
                 R G  G+PG  G PG+ G  G PG+ GL                           
Sbjct: 1971 PVPERRRGPKGDPGERGSPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPG 2030

Query: 226  -------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   PG  G+PG  G  GE G  G RG RG+ G  G  G
Sbjct: 2031 LAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQG 2072



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 69/203 (33%), Positives = 81/203 (39%), Gaps = 65/203 (32%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG-VVGPPGPQGIPGDEGK----------- 159
            PGL+G  G  G  G  GE G +G +GE GAPG + G  GP G+PG +G            
Sbjct: 1321 PGLKGSPGLPGPRGEPGEQGSRGPKGEPGAPGQITGGEGP-GLPGRKGDPGPSGPPGPRG 1379

Query: 160  ------------------RGPKGDMGYPGPQG------IPGDEG---------------- 179
                              +G KGD G  GP G       PG+ G                
Sbjct: 1380 PLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGP 1439

Query: 180  --KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
              ++G KGD    G  GL G+ G PGE          G  G PG  G  G  G PG  G 
Sbjct: 1440 PGEKGEKGD-SEDGAPGLPGQPGSPGE---------QGPRGPPGAIGPKGDRGFPGPLGE 1489

Query: 238  NGEKGMTGPRGNRGKSGINGVPG 260
             GEKG  GP G  G  G+ GV G
Sbjct: 1490 AGEKGERGPPGPAGSRGLPGVAG 1512



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/114 (35%), Positives = 46/114 (40%), Gaps = 33/114 (28%)

Query: 183  PKGDMGYPGRIGLDGR------------------------------DGLPGEPGLDGIPG 212
            PKG  G PG +GL G+                               G PG  G  G PG
Sbjct: 1251 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPG 1310

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG-ING--VPGTPA 263
            R G  G PG  GL G  G+PG  G  GE+G  GP+G  G  G I G   PG P 
Sbjct: 1311 RPGTPGTPGAPGLKGSPGLPGPRGEPGEQGSRGPKGEPGAPGQITGGEGPGLPG 1364


>gi|270007565|gb|EFA04013.1| hypothetical protein TcasGA2_TC014162 [Tribolium castaneum]
          Length = 453

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 112/201 (55%), Gaps = 21/201 (10%)

Query: 282 QLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLG-SWKD 340
            +++PP I  S    SSS ++VREG N  L C ATG P+PS+ WK  +N  IT+  +   
Sbjct: 123 HVVVPPNIDDS---LSSSDVIVREGANETLTCKATGSPQPSVKWKRDDNSKITINKTLTV 179

Query: 341 SAVASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGR 385
           S     TL  TRI+R++MGAY+C+A N                PP + I ++ VG P+  
Sbjct: 180 SEWEGETLELTRISRLDMGAYLCIASNGVPPTVSKRIKVSVDFPPMLWIPHQLVGAPLAY 239

Query: 386 TATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISD-VDKGSYQYIMQLNISNVNISDF 444
           + TLEC  EA P S+ YW   DG +I H+  KY   + V   SY+  M+L I+N+  SD+
Sbjct: 240 SVTLECFTEAHPSSLNYWTREDGQMI-HESKKYHAENTVGTPSYKTHMKLTINNIQQSDY 298

Query: 445 DTYRCISKNEVDIAKGSLILF 465
            TY+C++KN      G++ L+
Sbjct: 299 GTYKCVAKNPRGETDGTIRLY 319


>gi|189237287|ref|XP_973967.2| PREDICTED: similar to CG31708 CG31708-PB [Tribolium castaneum]
          Length = 398

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 112/201 (55%), Gaps = 21/201 (10%)

Query: 282 QLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLG-SWKD 340
            +++PP I  S    SSS ++VREG N  L C ATG P+PS+ WK  +N  IT+  +   
Sbjct: 112 HVVVPPNIDDS---LSSSDVIVREGANETLTCKATGSPQPSVKWKRDDNSKITINKTLTV 168

Query: 341 SAVASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGR 385
           S     TL  TRI+R++MGAY+C+A N                PP + I ++ VG P+  
Sbjct: 169 SEWEGETLELTRISRLDMGAYLCIASNGVPPTVSKRIKVSVDFPPMLWIPHQLVGAPLAY 228

Query: 386 TATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISD-VDKGSYQYIMQLNISNVNISDF 444
           + TLEC  EA P S+ YW   DG +I H+  KY   + V   SY+  M+L I+N+  SD+
Sbjct: 229 SVTLECFTEAHPSSLNYWTREDGQMI-HESKKYHAENTVGTPSYKTHMKLTINNIQQSDY 287

Query: 445 DTYRCISKNEVDIAKGSLILF 465
            TY+C++KN      G++ L+
Sbjct: 288 GTYKCVAKNPRGETDGTIRLY 308


>gi|170058133|ref|XP_001864788.1| lachesin [Culex quinquefasciatus]
 gi|167877329|gb|EDS40712.1| lachesin [Culex quinquefasciatus]
          Length = 349

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 25/201 (12%)

Query: 284 LIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV 343
           ++PP I  S    SSS ++VREG NV LRC ATG P PSI WK  ++  IT+   ++++V
Sbjct: 40  VLPPNIDDS---VSSSDLIVREGANVTLRCKATGSPPPSIKWKRDDSTKITIT--RNNSV 94

Query: 344 AS---STLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGR 385
                  LN +R++R +MGAY+C+A N                PP + I ++ VG+P+G 
Sbjct: 95  TDWEGDVLNMSRVSRFDMGAYLCIAFNGVPPSVSKRIKVSVDFPPMLWIPHQLVGIPVGY 154

Query: 386 TATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDV-DKGSYQYIMQLNISNVNISDF 444
            A+LEC +EA P S+ YW   +  +I HD +KY    +    SY+ +M+L+I+ V  SD+
Sbjct: 155 NASLECNIEAHPTSLNYWTRENDQMI-HDSLKYKTETIPGTPSYKAVMRLHITEVQHSDY 213

Query: 445 DTYRCISKNEVDIAKGSLILF 465
             YRCI+KN      G++ L+
Sbjct: 214 GVYRCIAKNPRGETDGTIRLY 234


>gi|307212592|gb|EFN88307.1| Lachesin [Harpegnathos saltator]
          Length = 406

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 117/203 (57%), Gaps = 26/203 (12%)

Query: 282 QLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDS 341
           ++++PP I       +S+ +VVREG NV LRC ATG PKP+I W+  + + I+LG  K+ 
Sbjct: 84  EVVVPPDISDDS---TSTDMVVREGSNVSLRCEATGSPKPNITWRREDGELISLG--KNL 138

Query: 342 AVAS---STLNFTRINRINMGAYMCLADN-VP--------------PQILIRNRRVGVPI 383
            VAS   S  N T++NR+ MGAY+C+A N VP              P I I+N+ VG   
Sbjct: 139 EVASIEGSIFNITKVNRLQMGAYLCIASNGVPPTVSKRIMLVVHFTPMISIQNQLVGAQE 198

Query: 384 GRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISD 443
           G+  TLEC  EA+P S+ YW   D  +   D  + S SD    +Y+  M+L I +V +SD
Sbjct: 199 GQQMTLECYSEAYPKSINYWTREDVIISNGDKYEPSFSD---NAYKVHMKLMIRSVAMSD 255

Query: 444 FDTYRCISKNEVDIAKGSLILFE 466
           + +Y+CISKN +    GS+ L+ 
Sbjct: 256 YGSYKCISKNSLGETDGSIKLYH 278


>gi|426249952|ref|XP_004018710.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(VII) chain [Ovis
            aries]
          Length = 2811

 Score =  130 bits (328), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 74/151 (49%), Positives = 91/151 (60%), Gaps = 7/151 (4%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKGDMGYP 169
            P GL GP G +GE G KG+ G  G +G+KG   V+ GPPGP+G  GD G+RGP+G  G  
Sbjct: 2373 PRGLAGPPGSRGERGEKGDPGASGLKGDKGDSAVILGPPGPRGAKGDSGERGPRGIDGEK 2432

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP+G  G+ G++G KG+ G  G  GL G  GL G  G  G P      GIPG+ G PGKD
Sbjct: 2433 GPRGDSGEPGEKGTKGEPGDKGSAGLLGARGLTGPKGEPGAP------GIPGEPGSPGKD 2486

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG  G  G+ G  GPRG +G+ GI G  G
Sbjct: 2487 GDPGVRGDKGDIGFMGPRGLKGERGIKGACG 2517



 Score =  110 bits (275), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 65/142 (45%), Positives = 81/142 (57%), Gaps = 8/142 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +G  G KG  G  G  G+ G +GE GAPG+ G PG  G  GD G RG KGD+G+ GP+
Sbjct: 2445 GTKGEPGDKGSAGLLGARGLTGPKGEPGAPGIPGEPGSPGKDGDPGVRGDKGDIGFMGPR 2504

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG-- 230
            G+   +G+RG KG  G  G  G  G  GLPG PGL G  G  G  G+PG+ G PGK+G  
Sbjct: 2505 GL---KGERGIKGACGLDGEKGDKGEAGLPGRPGLAGRKGELGEPGVPGQAGAPGKEGLI 2561

Query: 231  ---IPGTNGTNGEKGMTGPRGN 249
               + G +  +   G  GPRGN
Sbjct: 2562 GPKVRGPSTVDRVGGFPGPRGN 2583



 Score =  109 bits (272), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 71/172 (41%), Positives = 92/172 (53%), Gaps = 22/172 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGPK 163
            G  GP G KG+ G +G  G+ GE+G +G  G  G  G +G PGD+G           GPK
Sbjct: 2409 GPPGPRGAKGDSGERGPRGIDGEKGPRGDSGEPGEKGTKGEPGDKGSAGLLGARGLTGPK 2468

Query: 164  GDMGYPGPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G+ G PG  G PG  GK      RG KGD+G+ G  GL G  G+ G  GLDG  G  G  
Sbjct: 2469 GEPGAPGIPGEPGSPGKDGDPGVRGDKGDIGFMGPRGLKGERGIKGACGLDGEKGDKGEA 2528

Query: 218  GIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+PG+ GL G+       G+PG  G  G++G+ GP+  RG S ++ V G P 
Sbjct: 2529 GLPGRPGLAGRKGELGEPGVPGQAGAPGKEGLIGPK-VRGPSTVDRVGGFPG 2579



 Score =  109 bits (272), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 70/182 (38%), Positives = 91/182 (50%), Gaps = 38/182 (20%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ- 172
            ++GP G+KG+   +G  G+ G  G  G PG  GPPGP G  G  G  G  G  G  G Q 
Sbjct: 1653 VRGPAGEKGD---RGPPGLDGRSGLDGKPGASGPPGPNGATGKAGDPGRDGLPGLRGEQG 1709

Query: 173  -----------------------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                                         G PG++G++G KGD G PGR   +GRDG  G
Sbjct: 1710 PPGPAGPAGAPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGR---EGRDGPKG 1766

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            E G  G PG  G  G+PG+ G PG+   G+PG++G  G++G TGPRG +G  G  G+ G 
Sbjct: 1767 ERGAPGSPGLQGPPGLPGQVGPPGQGFPGVPGSSGPKGDRGETGPRGEQGLPGERGLRGE 1826

Query: 262  PA 263
            P 
Sbjct: 1827 PG 1828



 Score =  100 bits (249), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 94/180 (52%), Gaps = 28/180 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IPG 155
            PPGL G  G  G+ GA G  G  G  G+ G PG  G PG +G                PG
Sbjct: 1665 PPGLDGRSGLDGKPGASGPPGPNGATGKAGDPGRDGLPGLRGEQGPPGPAGPAGAPGKPG 1724

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            ++GK G  G  G PG    PG++G++G KGD G PGR   +GRDG  GE G  G PG  G
Sbjct: 1725 EDGKPGLNGKNGEPGD---PGEDGRKGEKGDSGAPGR---EGRDGPKGERGAPGSPGLQG 1778

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              G+PG+ G PG+ G PG  G+      +GP+G+RG++G  G  G P     + E  SL+
Sbjct: 1779 PPGLPGQVGPPGQ-GFPGVPGS------SGPKGDRGETGPRGEQGLPGERGLRGEPGSLV 1831



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/181 (40%), Positives = 83/181 (45%), Gaps = 38/181 (20%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPGPQGIPGDE 157
            E  PPG +GPIG  GE G KG+ G            GERG  G PG+ G PG  GIPG  
Sbjct: 1877 ERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLAVGERGLPGPPGLAGEPGKPGIPG-- 1934

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-------------- 203
                       PGP G  G+ G+ G +G+ G  G  G  GRDGLPG              
Sbjct: 1935 ----------LPGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAA 1984

Query: 204  -EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
             EPG  G+    G  G  G  G PG DG  G  G  GE G+ G RG  G+ G NG PG P
Sbjct: 1985 DEPG-SGLSREQGPPGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGQNGSPGLP 2043

Query: 263  A 263
             
Sbjct: 2044 G 2044



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 79/227 (34%), Positives = 94/227 (41%), Gaps = 81/227 (35%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPG--------PQGIPGDEGKR 160
            PG  G  G+KG+ GA   +G  G KGERG  G+PG+ GPPG         QG PG  G  
Sbjct: 1741 PGEDGRKGEKGDSGAPGREGRDGPKGERGAPGSPGLQGPPGLPGQVGPPGQGFPGVPGSS 1800

Query: 161  GPKGDMGYPGP---QGIPGDEG-------------------------------------- 179
            GPKGD G  GP   QG+PG+ G                                      
Sbjct: 1801 GPKGDRGETGPRGEQGLPGERGLRGEPGSLVNAERLLENIGIKTSALREIVETWEESSGG 1860

Query: 180  -------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------------GIPGR 213
                   +RGPKGD G  G  G +G  G  GE G                     G+PG 
Sbjct: 1861 FLPAPERRRGPKGDPGERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLAVGERGLPGP 1920

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G PGK G+P   G+PG  G+ GE G  G RG RG+ G  G  G
Sbjct: 1921 PGLAGEPGKPGIP---GLPGPAGSVGEAGRPGERGERGEKGERGEQG 1964



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 78/209 (37%), Positives = 93/209 (44%), Gaps = 61/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP----------------------PGP 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                       G 
Sbjct: 1549 GLRGAPGARGPVGEKGDQGDPGEDGRNGSPGPSGPKGDRGEPGPPGAPGRLVDVGLGAGE 1608

Query: 151  QGIPGDEGKR---------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
            +G PGD G+                G +G  G  GP G  GD G RGP G+ G  G  GL
Sbjct: 1609 KGEPGDRGQEGPRGPKGDPGPPGASGERGISGLRGPPGPQGDPGVRGPAGEKGDRGPPGL 1668

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------KDGI 231
            DGR GL G+PG  G PG NG  G    PG+DGLPG                     +DG 
Sbjct: 1669 DGRSGLDGKPGASGPPGPNGATGKAGDPGRDGLPGLRGEQGPPGPAGPAGAPGKPGEDGK 1728

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG NG NGE G  G  G +G+ G +G PG
Sbjct: 1729 PGLNGKNGEPGDPGEDGRKGEKGDSGAPG 1757



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 77/247 (31%), Positives = 98/247 (39%), Gaps = 83/247 (33%)

Query: 112  PGLQGPIGQKGEIGAKGE-----MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PGL GP+G KGE G  G      +G  G +GEKGAPG     +VG PG +G  G  G RG
Sbjct: 2162 PGLPGPVGPKGEPGPMGTPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRG 2221

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPG------------------------------ 191
             KG+ G  G  G PG++G++G  G  G+ G                              
Sbjct: 2222 EKGEAGRAGEPGDPGEDGQKGAPGPKGHKGDPGVGVQGPPGPVGPPGLKGDSGPPGPPGP 2281

Query: 192  --------RIGLDGRDGLPG---EPGLDGIPGRN-------------------------- 214
                    + GL G  G PG   E GL G PGR                           
Sbjct: 2282 PGIVGFPGQTGLRGEQGQPGPSGERGLAGAPGREGAPGPLGPPGPPGSAGAPGAPGLKGD 2341

Query: 215  ------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                  G+ G  G+ G PG  G  G  G  G +G+ GP G+RG+ G  G PG   +   K
Sbjct: 2342 KGDTGAGLPGARGRXGEPGVRGEDGRPGLEGPRGLAGPPGSRGERGEKGDPGASGLKGDK 2401

Query: 269  RESCSLL 275
             +S  +L
Sbjct: 2402 GDSAVIL 2408



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 72/212 (33%), Positives = 84/212 (39%), Gaps = 66/212 (31%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGYPGP---- 171
            G++G  GA G  G  G  G  GAPG  G PG   P+G PG+ G RGPKG+ G PG     
Sbjct: 1225 GERGFPGADGLPGTPGRPGSPGAPGPKGSPGWAGPRGEPGERGPRGPKGEPGEPGQVIGG 1284

Query: 172  ---------------------------------QGIPGDEGKRGPKG------------- 185
                                             +G  GD G+R  KG             
Sbjct: 1285 EGPGRPGQKGDPGPPGPPGSRGPLGDPXPGTAVKGEKGDRGERVSKGQVRLGVAWSQTGG 1344

Query: 186  -----------DMGYPGRIGLDG--RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                        +G PG  G  G   DG PG PG  GIPG  G+ G+PG  G  G  G+ 
Sbjct: 1345 PGLPGSPGPQGSVGPPGEKGEKGDCEDGAPGLPGQPGIPGERGLRGLPGDAGPKGDRGLT 1404

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  GEKG  G  G  G  G  G PG PA+
Sbjct: 1405 GAAGEAGEKGERGLPGPVGPQGEPGRPGDPAV 1436



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 73/183 (39%), Positives = 84/183 (45%), Gaps = 33/183 (18%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP--GP-----QGIPGDEGKRGPK 163
            P G +G  G  GE G KGE G+ G  G +G PG  G P  GP     +G  GD G  GPK
Sbjct: 1397 PKGDRGLTGAAGEAGEKGERGLPGPVGPQGEPGRPGDPAVGPGGAGAKGEKGDMGPPGPK 1456

Query: 164  GDMGYPGPQGIPGDE--GKRGPKGDMGYPGRIGLDGR------------DGLPGEPGLDG 209
            G  G+ G QG PG    G  GPKGD G  G IGL GR             G PG PG  G
Sbjct: 1457 GATGFKGEQGSPGLALPGDPGPKGDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPG 1516

Query: 210  IPGRNGMDGIPGKDG------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G  G DG  G+ G              G+ G+ G  G  G  G  G +G+ G+ G NG
Sbjct: 1517 PVGPRGRDGEAGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRNG 1576

Query: 258  VPG 260
             PG
Sbjct: 1577 SPG 1579



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 30/165 (18%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
            +G  GE G KG+  E GAPG+   PG  GIPG+ G RG  GD G  G +G+ G  G+ G 
Sbjct: 1357 VGPPGEKGEKGD-CEDGAPGL---PGQPGIPGERGLRGLPGDAGPKGDRGLTGAAGEAGE 1412

Query: 184  KGDMGYPGRIGLDGRDGLPGEPGLD-------------GIPGRNGMDGIPGKDGLPGKDG 230
            KG+ G PG +G  G  G PG+P +              G PG  G  G  G+ G PG   
Sbjct: 1413 KGERGLPGPVGPQGEPGRPGDPAVGPGGAGAKGEKGDMGPPGPKGATGFKGEQGSPGL-A 1471

Query: 231  IPGTNGTNGEKGMTGPRGNRGKS------------GINGVPGTPA 263
            +PG  G  G+ G  GP G  G++            G  G PG+P 
Sbjct: 1472 LPGDPGPKGDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPG 1516



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 68/200 (34%), Positives = 85/200 (42%), Gaps = 58/200 (29%)

Query: 118  IGQKGEIGAKGEM-----------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            +G  GE G KG+            G+ GERG +G PG  GP G +G+ G  G+ G KG+ 
Sbjct: 1357 VGPPGEKGEKGDCEDGAPGLPGQPGIPGERGLRGLPGDAGPKGDRGLTGAAGEAGEKGER 1416

Query: 167  GYP---GPQGIPG-------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            G P   GPQG PG                   D G  GPKG  G+ G  G  G   LPG+
Sbjct: 1417 GLPGPVGPQGEPGRPGDPAVGPGGAGAKGEKGDMGPPGPKGATGFKGEQGSPGL-ALPGD 1475

Query: 205  PGLDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTNGEKGMTGPRGNR-- 250
            PG  G PG  G  G+ G+             G PG+ G PG  G  G  G  G +G+   
Sbjct: 1476 PGPKGDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPGPVGPRGRDGEAGEKGDEGP 1535

Query: 251  ----------GKSGINGVPG 260
                      G+ G+ G PG
Sbjct: 1536 PGDPGLPGKAGERGLRGAPG 1555



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 75/241 (31%), Positives = 92/241 (38%), Gaps = 82/241 (34%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------------------- 143
            PGL GP G  GE G  GE G +GE+GE+G  G                            
Sbjct: 1933 PGLPGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAADEPGSGLS 1992

Query: 144  -VVGPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
               GPPG    +G PG +G RGPKGD G PG +G  G+ G+RG  G  G PG  G+ G +
Sbjct: 1993 REQGPPGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGQNGSPGLPGERGVAGPE 2052

Query: 200  GLPGEPGLDGIP------------------------GRNGMDGIPGKDGLP--------- 226
            G PG  G  G P                        G +G+ G PG+ G P         
Sbjct: 2053 GKPGLQGPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTG 2112

Query: 227  -----------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
                             G  G+PG   + G +G     G RG  G+ G PG P     K 
Sbjct: 2113 AVGLPGPPGPSGLVGPQGAPGLPGQVVSPGGQGWAPGLGTRGAPGVPGSPGLPGPVGPKG 2172

Query: 270  E 270
            E
Sbjct: 2173 E 2173



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 74/238 (31%), Positives = 96/238 (40%), Gaps = 75/238 (31%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDE 157
            GF  +  +    G +GP G +GE G KG+ G  G+RG+ G+PG+ G     GP+G PG +
Sbjct: 1999 GFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGQNGSPGLPGERGVAGPEGKPGLQ 2058

Query: 158  GKR---------------------------GPKGDMGYPG-------------------- 170
            G R                           GP G  G PG                    
Sbjct: 2059 GPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLPG 2118

Query: 171  ---------PQGIPGDEGK------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
                     PQG PG  G+             G +G  G PG  GL G  G  GEPG  G
Sbjct: 2119 PPGPSGLVGPQGAPGLPGQVVSPGGQGWAPGLGTRGAPGVPGSPGLPGPVGPKGEPGPMG 2178

Query: 210  IPGRN--GMDGIPGKDGLPG--KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             PG+   G  G  G+ G PG     + G  G  G++G+ GPRG +G++G  G PG P 
Sbjct: 2179 TPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2236



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 69/195 (35%), Positives = 82/195 (42%), Gaps = 51/195 (26%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPG---------------VVGPPGPQGIPGDEGK----- 159
            Q G  G +G+ G  GERG  GAPG                 G PG  G+ GD+G      
Sbjct: 2290 QTGLRGEQGQPGPSGERGLAGAPGREGAPGPLGPPGPPGSAGAPGAPGLKGDKGDTGAGL 2349

Query: 160  ------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD-------G 200
                        RG  G  G  GP+G+ G  G RG +G+ G PG  GL G         G
Sbjct: 2350 PGARGRXGEPGVRGEDGRPGLEGPRGLAGPPGSRGERGEKGDPGASGLKGDKGDSAVILG 2409

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE------------KGMTGPRG 248
             PG  G  G  G  G  GI G+ G  G  G PG  GT GE            +G+TGP+G
Sbjct: 2410 PPGPRGAKGDSGERGPRGIDGEKGPRGDSGEPGEKGTKGEPGDKGSAGLLGARGLTGPKG 2469

Query: 249  NRGKSGINGVPGTPA 263
              G  GI G PG+P 
Sbjct: 2470 EPGAPGIPGEPGSPG 2484



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 66/178 (37%), Positives = 88/178 (49%), Gaps = 13/178 (7%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+  +G      E   PG+ G  G  G+ G  G  G KG+ G  G  G+ G  G +G  G
Sbjct: 2458 LLGARGLTGPKGEPGAPGIPGEPGSPGKDGDPGVRGDKGDIGFMGPRGLKGERGIKGACG 2517

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP--------GL 207
             +G++G KG+ G PG    PG  G++G  G+ G PG+ G  G++GL G           +
Sbjct: 2518 LDGEKGDKGEAGLPGR---PGLAGRKGELGEPGVPGQAGAPGKEGLIGPKVRGPSTVDRV 2574

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS--GINGVPGTPA 263
             G PG  G DG  G  G PG  G  G  G  G+K ++G RG  G+S  G  G PGTP 
Sbjct: 2575 GGFPGPRGNDGSSGPPGPPGSIGPKGPEGLQGQKSLSGRRGPPGQSVVGAPGAPGTPG 2632



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 66/174 (37%), Positives = 84/174 (48%), Gaps = 39/174 (22%)

Query: 113  GLQGPIGQKGE----------------------IGAKGEMGVKGERGEKGAPGVV--GPP 148
            GL GP+G +GE                      +G  G  G  G +GE+G+PG+   G P
Sbjct: 1417 GLPGPVGPQGEPGRPGDPAVGPGGAGAKGEKGDMGPPGPKGATGFKGEQGSPGLALPGDP 1476

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            GP+   GD G RGP G  G  GP G  G  G++G  G  G PG +G  GRDG  GE G +
Sbjct: 1477 GPK---GDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPGPVGPRGRDGEAGEKGDE 1533

Query: 209  GIP---------GRNGMDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRGNR 250
            G P         G  G+ G PG  G  G+    G PG +G NG  G +GP+G+R
Sbjct: 1534 GPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRNGSPGPSGPKGDR 1587



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 57/169 (33%), Positives = 73/169 (43%), Gaps = 38/169 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVK---------------------------GERGEKGAPG 143
            P  +  P GQKGE    G+MG+K                             +GE+G PG
Sbjct: 1175 PCSVHCPKGQKGE---PGQMGLKGQAGPPGPPGLPGRIGAPGPQGPPGSVSAKGERGFPG 1231

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
              G PG  G PG  G  GPKG  G+ GP+G PG+ G RGPKG+ G PG++       + G
Sbjct: 1232 ADGLPGTPGRPGSPGAPGPKGSPGWAGPRGEPGERGPRGPKGEPGEPGQV-------IGG 1284

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            E         +     P     P  D  PGT    GEKG  G R ++G+
Sbjct: 1285 EGPGRPGQKGDPGPPGPPGSRGPLGDPXPGT-AVKGEKGDRGERVSKGQ 1332



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 91/216 (42%), Gaps = 63/216 (29%)

Query: 108  EYCPPGLQ--GPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPPGPQGIPGD 156
            E   PGL   G  G KG+ G +G +G+ G           GEKG PG  G PGP G  G 
Sbjct: 1464 EQGSPGLALPGDPGPKGDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPGPVGPRGR 1523

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G+ G KGD G PG  G+PG  G+RG +G  G  G +G  G  G PGE G +G PG +G 
Sbjct: 1524 DGEAGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRNGSPGPSGP 1583

Query: 217  DGI-------------------PGKDGLP---------------------GKDGIPG--- 233
             G                     G+ G P                     G+ GI G   
Sbjct: 1584 KGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGERGISGLRG 1643

Query: 234  ---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
                       G  GEKG  GP G  G+SG++G PG
Sbjct: 1644 PPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPG 1679



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 78/201 (38%), Gaps = 55/201 (27%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKG---------APGVVGPPGPQGIPGDEGKRGPKGD 165
            +G  G+ G  G  G  G  GE GEKG          PG  G  G +G PG  G  G KGD
Sbjct: 1506 KGDPGRPGSPGPVGPRGRDGEAGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGD 1565

Query: 166  MGYPGPQGIPGDEGKRGPKGD----------------------MGYPGRIGLD------- 196
             G PG  G  G  G  GPKGD                       G PG  G +       
Sbjct: 1566 QGDPGEDGRNGSPGPSGPKGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKG 1625

Query: 197  --GRDGLPGEPGLDGI---------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
              G  G  GE G+ G+                G  G  G PG DG  G DG PG +G  G
Sbjct: 1626 DPGPPGASGERGISGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGASGPPG 1685

Query: 240  EKGMTGPRGNRGKSGINGVPG 260
              G TG  G+ G+ G+ G+ G
Sbjct: 1686 PNGATGKAGDPGRDGLPGLRG 1706



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 63/181 (34%), Positives = 70/181 (38%), Gaps = 43/181 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--GKRGPKGDMGYP 169
            PG QG     G  GA G  G  G  G  G     G PGP G PG    G  G KG+ G P
Sbjct: 2141 PGGQGWAPGLGTRGAPGVPGSPGLPGPVGPK---GEPGPMGTPGQAVVGPPGAKGEKGAP 2197

Query: 170  GPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G   + GD  G+ G KGD G PG  G  G  G  GEP   G PG +G  G PG  G  G 
Sbjct: 2198 G--ALAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP---GDPGEDGQKGAPGPKGHKGD 2252

Query: 229  DGIPGT--------------------------------NGTNGEKGMTGPRGNRGKSGIN 256
             G+                                    G  GE+G  GP G RG +G  
Sbjct: 2253 PGVGVQGPPGPVGPPGLKGDSGPPGPPGPPGIVGFPGQTGLRGEQGQPGPSGERGLAGAP 2312

Query: 257  G 257
            G
Sbjct: 2313 G 2313



 Score = 49.7 bits (117), Expect = 0.007,   Method: Composition-based stats.
 Identities = 46/102 (45%), Positives = 51/102 (50%), Gaps = 3/102 (2%)

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            PKG  G PG  G+   +G+ GP G  G PGRIG  G  G PG     G  G  G DG+PG
Sbjct: 1181 PKGQKGEPGQMGL---KGQAGPPGPPGLPGRIGAPGPQGPPGSVSAKGERGFPGADGLPG 1237

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G PG  G PG  G+ G  G  G  G RG  G  G PG P 
Sbjct: 1238 TPGRPGSPGAPGPKGSPGWAGPRGEPGERGPRGPKGEPGEPG 1279


>gi|339245333|ref|XP_003378592.1| conserved hypothetical protein [Trichinella spiralis]
 gi|316972486|gb|EFV56163.1| conserved hypothetical protein [Trichinella spiralis]
          Length = 610

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 139/288 (48%), Gaps = 41/288 (14%)

Query: 551 CQVYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGN-SEKFWMTTDSDPTHLN 609
           C +  VG PVFH  +               GAWM D    +G  S K W+        L 
Sbjct: 257 CILDRVGTPVFHSESQYGN----------VGAWMPDAASENGRMSHKRWVFDGLVSPVLY 306

Query: 610 EYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGS-----SKI 664
           EYK +      ++S  Y +     G   VV+N SF+YH+  S  +V+++L S      K+
Sbjct: 307 EYKTELDLFYKSQSVKYYVDYLATGTGGVVYNGSFFYHRYNSPYVVRYNLDSGNLHQRKV 366

Query: 665 INIV-------------------NLSTV-DPNIKLYKTGYNVMDFSLDENGLWVIYG--L 702
            N+                    N STV DP   LY   +N  DF+ DENGLW+IYG   
Sbjct: 367 PNLAYRDCILKEFSPDGNQIWDCNASTVRDP--YLYNMSHNFADFATDENGLWLIYGNTY 424

Query: 703 SNNNTAVTKLDTATLQIQYTWNITLLHK-KVGDMFVVCGVLYVVDSVTDRNTNIRFALDL 761
            NN  +V  +D   L +  +  + L ++  + +MF++CGVLY + S TD ++NI F  DL
Sbjct: 425 ENNTLSVVNIDANYLTLIRSLLVPLNNETSISNMFIMCGVLYGLRSSTDYDSNIDFVYDL 484

Query: 762 YKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRYHE 809
           Y+     +S+ + NPF  TTM+ YN   + LY +D GN L+ P+R  E
Sbjct: 485 YEEKFYNISIKWRNPFYKTTMLNYNPLDRRLYFFDNGNLLSSPVRVKE 532



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 24/103 (23%)

Query: 85  WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
           W+ ++ + +I   A+  +C   K++C                     +   +  +GAPG 
Sbjct: 110 WIHISPFHKISKAAVFRYCIIIKQHC---------------------IVNHKKLRGAPGQ 148

Query: 145 VGPPGPQGIPGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPK 184
            GP GP GI G +GK+GP   +G +G  GP+GI G  GK G +
Sbjct: 149 RGPEGPPGIRGVKGKKGPVGFRGPLGSIGPKGIDGLPGKNGLR 191



 Score = 42.7 bits (99), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G  G  GP+G PG  G +G KG +G+ G +      G  G  G+DG+PG+NG+
Sbjct: 143 RGAPGQRGPEGPPGIRGVKGKKGPVGFRGPL------GSIGPKGIDGLPGKNGL 190



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 26/51 (50%)

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           I     + G PG+ G  G  GI G  G  G  G  GP G+ G  GI+G+PG
Sbjct: 136 IVNHKKLRGAPGQRGPEGPPGIRGVKGKKGPVGFRGPLGSIGPKGIDGLPG 186


>gi|157113488|ref|XP_001657852.1| lachesin, putative [Aedes aegypti]
 gi|108877713|gb|EAT41938.1| AAEL006477-PA [Aedes aegypti]
          Length = 349

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 114/199 (57%), Gaps = 23/199 (11%)

Query: 283 LLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA 342
           +++PP I+      +S+ +VVREG NV L+C A+G P P IIW+   N+PI+  +   S+
Sbjct: 44  VVVPPNILDYP---TSTDMVVREGSNVTLKCAASGSPPPIIIWRREGNEPISSDA---SS 97

Query: 343 VASSTLNFTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTA 387
             +ST +  R+NR++MGAY+C+A N                 P I I+++ VG  +G+  
Sbjct: 98  HNTSTFSIPRVNRLDMGAYLCIASNGIPPSVSKRVMLIVHFSPMIWIQDQLVGAALGQRL 157

Query: 388 TLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447
           TLEC  EAFP S+ YW   D  + +  G ++  S  +  +Y+ +M+L I  V+I DF TY
Sbjct: 158 TLECNSEAFPRSINYWMKNDTIITQ--GKRFEPSTHEASNYKVVMKLTIKEVDIGDFGTY 215

Query: 448 RCISKNEVDIAKGSLILFE 466
           +C+ KN +    GS+ ++ 
Sbjct: 216 KCVVKNSLGETDGSIKVYH 234


>gi|383851554|ref|XP_003701297.1| PREDICTED: neurotrimin-like [Megachile rotundata]
          Length = 449

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 116/200 (58%), Gaps = 21/200 (10%)

Query: 282 QLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKD- 340
           ++++PP I+      +S+ +VVREG NV LRC ATG PKP+I W+  + + I L + ++ 
Sbjct: 131 EVVVPPDILDYS---TSTDMVVREGSNVTLRCAATGSPKPNITWRREDGEAILLQNGQEV 187

Query: 341 SAVASSTLNFTRINRINMGAYMCLADN-VP--------------PQILIRNRRVGVPIGR 385
            +V  S    T++NR+ MGAY+C+A N VP              P I I+N+ VG   G+
Sbjct: 188 RSVEGSIFTITKVNRLQMGAYLCIASNGVPPTVSKRIMLIVHFSPMISIQNQLVGAQEGQ 247

Query: 386 TATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFD 445
             TLEC  EAFP S+ YW   +  +I+  G KY  S  D  +Y+  M+L I +V  SD+ 
Sbjct: 248 KMTLECHSEAFPKSINYWTKENNEIIK-TGEKYEQSVTD-NAYKIQMKLTIFSVTQSDYG 305

Query: 446 TYRCISKNEVDIAKGSLILF 465
           TY+CISKN +    G++ L+
Sbjct: 306 TYKCISKNSLGETDGNIKLY 325


>gi|432876058|ref|XP_004072956.1| PREDICTED: olfactomedin-like protein 2A-like [Oryzias latipes]
          Length = 653

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 123/237 (51%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP        K ++T      +L E+++ D FK    S  Y L   + G  HVV+
Sbjct: 417 GAWMKDP---LAKDSKIYVTNYYYGNNLVEFRNLDNFKQGRWSNLYKLPYNWIGTGHVVY 473

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  + N      G++ MDF++DE+GLWV
Sbjct: 474 NGAFYYNRAFTKNIIKYDLRMRYVAAWTLLHDVVYEDNTPWKWRGHSDMDFAVDESGLWV 533

Query: 699 IYGLSNNN------TAVTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY   + +        ++KLD   L +  + T+   L     G+ F++CGVLY VD    
Sbjct: 534 IYPSMDYDYNQQELIVISKLDPGDLSMKKETTYRTGLKRNSYGNCFIICGVLYAVDVYNQ 593

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           R+  + +A D + N      L F N ++ TT I YN + K LY WD GN LTY + +
Sbjct: 594 RDGEVNYAYDTHTNTEAVPRLPFINEYSFTTQIDYNPKEKLLYAWDNGNQLTYRVNF 650


>gi|340712175|ref|XP_003394639.1| PREDICTED: neurotrimin-like, partial [Bombus terrestris]
          Length = 419

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 114/200 (57%), Gaps = 21/200 (10%)

Query: 283 LLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA 342
           +++PP I+      +S+ ++VREG NV LRC A G P P+I W+  + + I LG+ ++  
Sbjct: 100 VVVPPDILD---YMTSTDMIVREGSNVTLRCAAKGSPTPNITWRREDGETILLGNGEEVR 156

Query: 343 VASS-TLNFTRINRINMGAYMCLADN-VP--------------PQILIRNRRVGVPIGRT 386
           +      N T+INR+ MGAY+C+A N +P              P I I+N+ VG   G+ 
Sbjct: 157 IVEGFIFNITKINRLQMGAYLCIASNGIPPTVSKRIMLTVQFSPMISIQNQLVGAQEGQR 216

Query: 387 ATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446
            TLEC  EAFP S+ YW   +  +I+ +G KY+        Y+  M+L IS+V +SD+ T
Sbjct: 217 MTLECNSEAFPKSINYWTKENNEIIK-NGEKYN-QTFSYNEYKVHMKLTISSVEMSDYGT 274

Query: 447 YRCISKNEVDIAKGSLILFE 466
           Y+CISKN +    GS+ L+ 
Sbjct: 275 YKCISKNSLGETDGSIKLYH 294


>gi|297488708|ref|XP_002697097.1| PREDICTED: collagen alpha-1(VII) chain [Bos taurus]
 gi|296474920|tpg|DAA17035.1| TPA: collagen, type VII, alpha 1 [Bos taurus]
          Length = 2932

 Score =  129 bits (324), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 73/151 (48%), Positives = 91/151 (60%), Gaps = 7/151 (4%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKGDMGYP 169
            P GL GP G +GE G KG+ G  G +G+KG   V+ GPPGP+G  GD G+RGP+G  G  
Sbjct: 2480 PRGLAGPPGIRGERGEKGDAGASGLKGDKGDSAVILGPPGPRGAKGDSGERGPRGIDGDK 2539

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP+G  G+ G++G KG+ G  G  GL G  GL G        G  G  GIPG+ G PGKD
Sbjct: 2540 GPRGDSGEPGEKGTKGEPGDKGSAGLLGARGLMGP------KGEPGAAGIPGEPGSPGKD 2593

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G  G+ G  GPRG +G+ GI G  G
Sbjct: 2594 GVPGVRGDKGDVGFMGPRGLKGERGIKGACG 2624



 Score =  112 bits (281), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 9/167 (5%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            +G    + E  P G+ G  G +G+ G  GE G KGE G+KG+ G++G  G  G  G+ G 
Sbjct: 2521 RGAKGDSGERGPRGIDGDKGPRGDSGEPGEKGTKGEPGDKGSAGLLGARGLMGPKGEPGA 2580

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G  G+ G PG  G+PG    RG KGD+G+ G  GL G  G+ G  GLDG  G  G  G 
Sbjct: 2581 AGIPGEPGSPGKDGVPG---VRGDKGDVGFMGPRGLKGERGIKGACGLDGEKGDKGEAGP 2637

Query: 220  PGKDGLPGK------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG+ GL G+       G+PG  G  G++G+ GP+G+RG  G  G  G
Sbjct: 2638 PGRPGLAGRRGELGEPGVPGQAGAPGKEGLIGPKGDRGFDGQPGPKG 2684



 Score =  108 bits (271), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 38/182 (20%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGDM- 166
            ++GP G+KG+   +G  G+ G  G  G PG  GPPGP G       PG +G  G +G+  
Sbjct: 1754 VRGPAGEKGD---RGPPGLDGRSGLDGKPGASGPPGPNGAMGKAGDPGRDGLPGLRGEQG 1810

Query: 167  -----------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                                   G  G  G PG++G++G KGD G PGR   +GRDG  G
Sbjct: 1811 PPGPAGPPGAPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGR---EGRDGPKG 1867

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            E G  G PG  G  G+PG+ G PG+   G+PG++G  G++G TGPRG +G  G  G+ G 
Sbjct: 1868 ERGAPGSPGLQGPPGLPGQVGPPGQGFPGVPGSSGPKGDRGETGPRGEQGLPGERGLRGE 1927

Query: 262  PA 263
            P 
Sbjct: 1928 PG 1929



 Score =  108 bits (270), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 64/143 (44%), Positives = 83/143 (58%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
            PG +G  G+ G+ G+ G +G +G  G KG PG  G PG  G PG +G    RG KGD+G+
Sbjct: 2548 PGEKGTKGEPGDKGSAGLLGARGLMGPKGEPGAAGIPGEPGSPGKDGVPGVRGDKGDVGF 2607

Query: 169  PGPQGIPGD---------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             GP+G+ G+         +G++G KG+ G PGR GL GR G  GEPG+ G  G  G +G+
Sbjct: 2608 MGPRGLKGERGIKGACGLDGEKGDKGEAGPPGRPGLAGRRGELGEPGVPGQAGAPGKEGL 2667

Query: 220  PGKDGLPGKDGIPGTNGTNGEKG 242
             G  G  G DG PG  G  GEKG
Sbjct: 2668 IGPKGDRGFDGQPGPKGDQGEKG 2690



 Score =  100 bits (249), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 94/180 (52%), Gaps = 28/180 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IPG 155
            PPGL G  G  G+ GA G  G  G  G+ G PG  G PG +G                PG
Sbjct: 1766 PPGLDGRSGLDGKPGASGPPGPNGAMGKAGDPGRDGLPGLRGEQGPPGPAGPPGAPGKPG 1825

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            ++GK G  G  G PG    PG++G++G KGD G PGR   +GRDG  GE G  G PG  G
Sbjct: 1826 EDGKPGLNGKNGEPGD---PGEDGRKGEKGDSGAPGR---EGRDGPKGERGAPGSPGLQG 1879

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              G+PG+ G PG+ G PG  G+      +GP+G+RG++G  G  G P     + E  SL+
Sbjct: 1880 PPGLPGQVGPPGQ-GFPGVPGS------SGPKGDRGETGPRGEQGLPGERGLRGEPGSLV 1932



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 68/181 (37%), Positives = 85/181 (46%), Gaps = 38/181 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDM 166
            G+ G  G KG++G  G  G+KGERG KGA G+       G  GP G PG  G+RG  G+ 
Sbjct: 2594 GVPGVRGDKGDVGFMGPRGLKGERGIKGACGLDGEKGDKGEAGPPGRPGLAGRRGELGEP 2653

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------- 204
            G PG  G PG EG  GPKGD G+ G+ G  G  G  GE                      
Sbjct: 2654 GVPGQAGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPPGVGGFPGPRGSDGSSGPP 2713

Query: 205  --------PGLDGIPGRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                     G +G+ G+ G  G PG+   G PG  G PG  G  G  G  GPRG +G++ 
Sbjct: 2714 GPPGSIGPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAA 2773

Query: 255  I 255
            +
Sbjct: 2774 L 2774



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 87/243 (35%), Positives = 102/243 (41%), Gaps = 94/243 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVK---------GERGEKGAPGVVGP---PGPQGIPGDEGK 159
            PG  GP G+ GE+G KG+ G           GERG +GAPG  GP    G QG PG+EG+
Sbjct: 1616 PGPVGPRGRDGEVGEKGDDGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEEGR 1675

Query: 160  RG------PKGDMGYP----------------GPQGIPGDEGK----------------- 180
             G      PKGD G P                G +G PGD G+                 
Sbjct: 1676 NGSPGPSGPKGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASG 1735

Query: 181  -------------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---DG 218
                               RGP G+ G  G  GLDGR GL G+PG  G PG NG     G
Sbjct: 1736 ERGVSGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGASGPPGPNGAMGKAG 1795

Query: 219  IPGKDGLPG---------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             PG+DGLPG                     +DG PG NG NGE G  G  G +G+ G +G
Sbjct: 1796 DPGRDGLPGLRGEQGPPGPAGPPGAPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSG 1855

Query: 258  VPG 260
             PG
Sbjct: 1856 APG 1858



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 79/227 (34%), Positives = 94/227 (41%), Gaps = 81/227 (35%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPG--------PQGIPGDEGKR 160
            PG  G  G+KG+ GA   +G  G KGERG  G+PG+ GPPG         QG PG  G  
Sbjct: 1842 PGEDGRKGEKGDSGAPGREGRDGPKGERGAPGSPGLQGPPGLPGQVGPPGQGFPGVPGSS 1901

Query: 161  GPKGDMGYPGP---QGIPGDEG-------------------------------------- 179
            GPKGD G  GP   QG+PG+ G                                      
Sbjct: 1902 GPKGDRGETGPRGEQGLPGERGLRGEPGSLVNAERLLENIGIKTSALREIVETWEESSGG 1961

Query: 180  -------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------------GIPGR 213
                   +RGPKGD G  G  G +G  G  GE G                     G+PG 
Sbjct: 1962 FLPTPERRRGPKGDPGERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPGP 2021

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G PGK G+P   G+PG  G+ GE G  G RG RG+ G  G  G
Sbjct: 2022 TGLAGEPGKPGIP---GLPGPAGSVGEAGRPGERGERGEKGERGEQG 2065



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 95/247 (38%), Gaps = 88/247 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------------------- 143
            PGL GP G  GE G  GE G +GE+GE+G  G                            
Sbjct: 2034 PGLPGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVDEPGSGLS 2093

Query: 144  -VVGPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
               GPPG    +G PG +G RGPKGD G PG +G  G+ G+RGP G  G PG  G+ G +
Sbjct: 2094 REQGPPGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGPNGSPGLPGERGVAGPE 2153

Query: 200  GLPGEPGLDGIP------------------------GRNGMDGIPGKD------------ 223
            G PG  G  G P                        G +G+ G PG+             
Sbjct: 2154 GKPGLQGPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTG 2213

Query: 224  --------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                                GLPG+ G  G  G  G  G TG  G+RG  G+ G PG P 
Sbjct: 2214 AVGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPG 2273

Query: 264  ICAYKRE 270
                K E
Sbjct: 2274 PVGPKGE 2280



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 67/176 (38%), Positives = 82/176 (46%), Gaps = 28/176 (15%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPGPQGIPGDE 157
            E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG  GIPG  
Sbjct: 1978 ERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPGPTGLAGEPGKPGIPGLP 2037

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKG----------DMGYPGRIGLDGRDGLPGEPGL 207
            G  G  G+ G PG +G  G++G+RG +G                ++ +D       EPG 
Sbjct: 2038 GPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVD-------EPG- 2089

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+    G  G  G  G PG DG  G  G  GE G+ G RG  G+ G NG PG P 
Sbjct: 2090 SGLSREQGPPGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGPNGSPGLPG 2145



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 78/244 (31%), Positives = 98/244 (40%), Gaps = 81/244 (33%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDE 157
            GF  +  +    G +GP G +GE G KG+ G  G+RG  G+PG+ G     GP+G PG +
Sbjct: 2100 GFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGPNGSPGLPGERGVAGPEGKPGLQ 2159

Query: 158  GKR---------------------------GPKGDMGYPG-------------------- 170
            G R                           GP G  G PG                    
Sbjct: 2160 GPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLPG 2219

Query: 171  ---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDG 218
                     PQG PG  G+ G  G  G PGR G  G+D   G PG PG  G+PG  G  G
Sbjct: 2220 PPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPGPVGPKG 2279

Query: 219  IPGKDGLPGK-----------DGIPGT--------NGTNGEKGMTGPRGNRGKSGINGVP 259
             PG  G PG+            G PG          G  G++G+ GPRG +G++G  G P
Sbjct: 2280 EPGPMGTPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP 2339

Query: 260  GTPA 263
            G P 
Sbjct: 2340 GDPG 2343



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 71/219 (32%), Positives = 88/219 (40%), Gaps = 70/219 (31%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPG----VVGPPGP--------------------- 150
            GP G  G  G +GE G +G RG KG PG    V+G  GP                     
Sbjct: 1319 GPKGSPGWAGPRGEPGERGPRGPKGEPGEPGQVIGGEGPGLPGQKGDPGPPGPPGSRGPL 1378

Query: 151  ----------QGIPGDEGKRGPKGDMGYPGP---------QGIPGDEGKRGPKGDMGYPG 191
                            +G++G +G+ G PGP          G+PG  G  GP+G +G PG
Sbjct: 1379 GDPGPRGPPGFPGTAVKGEKGDRGEQGPPGPGDGTAALGEPGLPGLPGSPGPQGSVGPPG 1438

Query: 192  RIGLDG--RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG- 248
              G  G   DG PG PG  GIPG  G+ G+PG  G  G  G+ G  G  GE+G  GP G 
Sbjct: 1439 EKGEKGDCEDGAPGLPGQPGIPGERGLRGLPGDAGPKGDRGLTGAAGEKGERGSPGPVGP 1498

Query: 249  -----------------------NRGKSGINGVPGTPAI 264
                                    RG+ G  G PG PA+
Sbjct: 1499 QGLPGVAGRPGPEGPEGPPGPTGRRGEKGEPGRPGDPAV 1537



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 70/197 (35%), Positives = 86/197 (43%), Gaps = 53/197 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
            P G  G  G  GE G+ G+ GV G RG+KG  G +GP    G +GI G  G  G KGD G
Sbjct: 2574 PKGEPGAAGIPGEPGSPGKDGVPGVRGDKGDVGFMGPRGLKGERGIKGACGLDGEKGDKG 2633

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPG------------ 212
              GP G PG  G+RG  G+ G PG+ G  G++GL    G+ G DG PG            
Sbjct: 2634 EAGPPGRPGLAGRRGELGEPGVPGQAGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERG 2693

Query: 213  ------------------------------RNGMDGIPGKDGLPGKD-----GIPGTNGT 237
                                            G+ G  G+ G PG+      G PGT G 
Sbjct: 2694 PPGVGGFPGPRGSDGSSGPPGPPGSIGPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGE 2753

Query: 238  NGEKGMTGPRGNRGKSG 254
             GE+G  GP G RG+ G
Sbjct: 2754 RGEQGRPGPAGPRGEKG 2770



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 71/193 (36%), Positives = 82/193 (42%), Gaps = 52/193 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++GAP         G VGP   PGP G PG    
Sbjct: 2233 PGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPGPVGPKGEPGPMGTPGQAVV 2292

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG   + GD  G+ G KGD G PG  G  G  G  GEP   G PG +G 
Sbjct: 2293 GPPGAKGEKGAPG--ALAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP---GDPGEDGQ 2347

Query: 217  DGIPGKDGLPGKD--------------------------------GIPGTNGTNGEKGMT 244
             G PG  G  G                                  G PG  G  GE G  
Sbjct: 2348 KGAPGPKGHKGDPGVGVQGPPGPVGPPGLKGDSGPPGSPGPPGIVGFPGQTGPRGELGQP 2407

Query: 245  GPRGNRGKSGING 257
            GP G RG +G  G
Sbjct: 2408 GPSGERGLAGAPG 2420



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 70/175 (40%), Positives = 88/175 (50%), Gaps = 29/175 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRGPKG 164
            PG +GP G++G IG  GE G KG+RG+ G       A G  G PGP G+ G+ GK G  G
Sbjct: 1976 PGERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPGPTGLAGEPGKPGIPG 2035

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------------EPGLDG 209
                PGP G  G+ G+ G +G+ G  G  G  GRDGLPG               EPG  G
Sbjct: 2036 ---LPGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVDEPG-SG 2091

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            +    G  G  G  G PG DG  G  G  GE G+   +G+RG+ G  G  G+P +
Sbjct: 2092 LSREQGPPGFKGAKGDPGSDGDRGPKGDRGEPGI---KGDRGEPGQRGPNGSPGL 2143



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 74/228 (32%), Positives = 85/228 (37%), Gaps = 77/228 (33%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG----------------------- 149
            GL GP G+KGE G  GE G  GE G+KGAPG  G  G                       
Sbjct: 2322 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGHKGDPGVGVQGPPGPVGPPGLKGDSG 2381

Query: 150  ------PQGIPGDEGKRGPKGDMGYPGPQ------------------------------- 172
                  P GI G  G+ GP+G++G PGP                                
Sbjct: 2382 PPGSPGPPGIVGFPGQTGPRGELGQPGPSGERGLAGAPGREGAPGPLGPPGPPGSAGVPG 2441

Query: 173  -------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                         G+PG  G+RG  G  G  GR GL+G  GL G PG+ G  G  G  G 
Sbjct: 2442 VPGLKGDKGDTGAGLPGARGERGEPGVRGEDGRPGLEGPRGLAGPPGIRGERGEKGDAGA 2501

Query: 220  PGKDGLPGKD----GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G      G PG  G  G+ G  GPRG  G  G  G  G P 
Sbjct: 2502 SGLKGDKGDSAVILGPPGPRGAKGDSGERGPRGIDGDKGPRGDSGEPG 2549



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 65/191 (34%), Positives = 84/191 (43%), Gaps = 40/191 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEM-----------GVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            PG QG +G  GE G KG+            G+ GERG +G PG  GP G +G+ G  G++
Sbjct: 1428 PGPQGSVGPPGEKGEKGDCEDGAPGLPGQPGIPGERGLRGLPGDAGPKGDRGLTGAAGEK 1487

Query: 161  GPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G +G  G  GPQG+PG                 G+RG KG+ G PG   +          
Sbjct: 1488 GERGSPGPVGPQGLPGVAGRPGPEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGAKGE 1547

Query: 206  GLD-GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS----------- 253
              D G PG  G  G  G+ G PG   +PG  G  G+ G  GP G  G++           
Sbjct: 1548 KGDMGPPGPKGATGFKGEQGSPGL-ALPGDPGPKGDPGGRGPIGLTGRAGPPGDSGPPGE 1606

Query: 254  -GINGVPGTPA 263
             G  G PG+P 
Sbjct: 1607 KGDPGRPGSPG 1617



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 91/241 (37%), Gaps = 75/241 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------------GP 147
            PG  GP G +GE G +GE G+ GERG +G PG +                          
Sbjct: 1898 PGSSGPKGDRGETGPRGEQGLPGERGLRGEPGSLVNAERLLENIGIKTSALREIVETWEE 1957

Query: 148  PGPQGIPGDEGKRGPKGD---MGYPGPQGIPGDEGKRGPKGDMGYP----------GRIG 194
                 +P  E +RGPKGD    G PG +G  G  G+RGPKGD G P          G  G
Sbjct: 1958 SSGGFLPTPERRRGPKGDPGERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERG 2017

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE-------------- 240
            L G  GL GEPG  GIPG  G  G  G+ G PG+ G  G  G  GE              
Sbjct: 2018 LPGPTGLAGEPGKPGIPGLPGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPG 2077

Query: 241  ------------------------KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
                                    KG  G  G+ G  G  G  G P I   + E     P
Sbjct: 2078 PPGPKVAVDEPGSGLSREQGPPGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGP 2137

Query: 277  N 277
            N
Sbjct: 2138 N 2138



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 71/203 (34%), Positives = 85/203 (41%), Gaps = 63/203 (31%)

Query: 112  PGLQGPIG------------------QKGEIGAKGEMGVKGERGEK-------------- 139
            PGLQGP G                    G  G +G  G+KGE GE               
Sbjct: 2156 PGLQGPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAV 2215

Query: 140  ------------------GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
                              G PG VG  G  G PG +G  G  GD G PG  G PG  G  
Sbjct: 2216 GLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPGPV 2275

Query: 182  GPKGD---MGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGK 228
            GPKG+   MG PG+  +G  G  G  G PG     L G PG  G  G+P   G+ G  G+
Sbjct: 2276 GPKGEPGPMGTPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRGEKGEAGR 2335

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             G PG  G +G+KG  GP+G++G
Sbjct: 2336 AGEPGDPGEDGQKGAPGPKGHKG 2358



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 69/198 (34%), Positives = 86/198 (43%), Gaps = 50/198 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------D 156
            PG +G  G  G+ G KG+ G+ G  GEKG  G  GP GPQG+PG                
Sbjct: 1460 PGERGLRGLPGDAGPKGDRGLTGAAGEKGERGSPGPVGPQGLPGVAGRPGPEGPEGPPGP 1519

Query: 157  EGKRGPKGDMGYPGPQGI----------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             G+RG KG+ G PG   +           GD G  GPKG  G+ G  G  G   LPG+PG
Sbjct: 1520 TGRRGEKGEPGRPGDPAVGPGGAGAKGEKGDMGPPGPKGATGFKGEQGSPGL-ALPGDPG 1578

Query: 207  LDGIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNGEKGMTGPRGNR------- 250
              G PG  G  G+ G+ G P         G  G PG+ G  G +G  G  G +       
Sbjct: 1579 PKGDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPGPVGPRGRDGEVGEKGDDGPPG 1638

Query: 251  --------GKSGINGVPG 260
                    G+ G+ G PG
Sbjct: 1639 DPGLPGKAGERGLRGAPG 1656



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 59/158 (37%), Positives = 68/158 (43%), Gaps = 44/158 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
            GL G  G KGE G  G  G+ G RGE G PGV   PG  G PG EG  GPKGD G+   P
Sbjct: 2624 GLDGEKGDKGEAGPPGRPGLAGRRGELGEPGV---PGQAGAPGKEGLIGPKGDRGFDGQP 2680

Query: 170  GPQGIPGDEGKR------------------------------------GPKGDMGYPGR- 192
            GP+G  G++G+R                                    G KG+ G PG  
Sbjct: 2681 GPKGDQGEKGERGPPGVGGFPGPRGSDGSSGPPGPPGSIGPKGPEGLQGQKGERGPPGES 2740

Query: 193  -IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
             +G  G  G PGE G  G PG  G  G  G+  L   D
Sbjct: 2741 VVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALTEDD 2778



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 69/194 (35%), Positives = 85/194 (43%), Gaps = 52/194 (26%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGYPGP---- 171
            G++G  GA G  G  G  G  GAPG  G PG   P+G PG+ G RGPKG+ G PG     
Sbjct: 1295 GERGFPGADGPPGSPGRPGTPGAPGPKGSPGWAGPRGEPGERGPRGPKGEPGEPGQVIGG 1354

Query: 172  --QGIPGDE--------------------------------GKRGPKGDMGYPGRIGLDG 197
               G+PG +                                G++G +G+ G PG      
Sbjct: 1355 EGPGLPGQKGDPGPPGPPGSRGPLGDPGPRGPPGFPGTAVKGEKGDRGEQGPPGPGDGTA 1414

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKD-----------GLPGKDGIPGTNGTNGEKGMTGP 246
              G PG PGL G PG  G  G PG+            GLPG+ GIPG  G  G  G  GP
Sbjct: 1415 ALGEPGLPGLPGSPGPQGSVGPPGEKGEKGDCEDGAPGLPGQPGIPGERGLRGLPGDAGP 1474

Query: 247  RGNRGKSGINGVPG 260
            +G+RG +G  G  G
Sbjct: 1475 KGDRGLTGAAGEKG 1488



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 66/193 (34%), Positives = 80/193 (41%), Gaps = 34/193 (17%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD- 156
            A++G      E  PPG        GE G  G  G  G +G       VGPPG +G  GD 
Sbjct: 1393 AVKGEKGDRGEQGPPGPGDGTAALGEPGLPGLPGSPGPQGS------VGPPGEKGEKGDC 1446

Query: 157  -EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG--- 212
             +G  G  G  G PG +G+ G  G  GPKGD G  G  G  G  G PG  G  G+PG   
Sbjct: 1447 EDGAPGLPGQPGIPGERGLRGLPGDAGPKGDRGLTGAAGEKGERGSPGPVGPQGLPGVAG 1506

Query: 213  ---------RNGMDGIPGKDGLPGKDGIPGTN-------------GTNGEKGMTGPRGNR 250
                       G  G  G+ G PG+ G P                G  G KG TG +G +
Sbjct: 1507 RPGPEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGAKGEKGDMGPPGPKGATGFKGEQ 1566

Query: 251  GKSGINGVPGTPA 263
            G  G+  +PG P 
Sbjct: 1567 GSPGL-ALPGDPG 1578



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 60/142 (42%), Positives = 75/142 (52%), Gaps = 17/142 (11%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            ++G  G  G  G +GE+G+PG+   G PGP+   GD G RGP G  G  GP G  G  G+
Sbjct: 1550 DMGPPGPKGATGFKGEQGSPGLALPGDPGPK---GDPGGRGPIGLTGRAGPPGDSGPPGE 1606

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------GRNGMDGIPGKDGLPGK--- 228
            +G  G  G PG +G  GRDG  GE G DG P         G  G+ G PG  G  G+   
Sbjct: 1607 KGDPGRPGSPGPVGPRGRDGEVGEKGDDGPPGDPGLPGKAGERGLRGAPGARGPVGEKGD 1666

Query: 229  DGIPGTNGTNGEKGMTGPRGNR 250
             G PG  G NG  G +GP+G+R
Sbjct: 1667 QGDPGEEGRNGSPGPSGPKGDR 1688



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 91/216 (42%), Gaps = 63/216 (29%)

Query: 108  EYCPPGLQ--GPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPPGPQGIPGD 156
            E   PGL   G  G KG+ G +G +G+ G           GEKG PG  G PGP G  G 
Sbjct: 1565 EQGSPGLALPGDPGPKGDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPGPVGPRGR 1624

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G+ G KGD G PG  G+PG  G+RG +G  G  G +G  G  G PGE G +G PG +G 
Sbjct: 1625 DGEVGEKGDDGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEEGRNGSPGPSGP 1684

Query: 217  DGI-------------------PGKDGLP---------------------GKDGIPG--- 233
             G                     G+ G P                     G+ G+ G   
Sbjct: 1685 KGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGERGVSGLRG 1744

Query: 234  ---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
                       G  GEKG  GP G  G+SG++G PG
Sbjct: 1745 PPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPG 1780



 Score = 48.9 bits (115), Expect = 0.012,   Method: Composition-based stats.
 Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 29/117 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG------------------------APGVVGP 147
            PG +G IG KG+ G  G+ G KG++GEKG                         PG +GP
Sbjct: 2662 PGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPPGVGGFPGPRGSDGSSGPPGPPGSIGP 2721

Query: 148  PGPQGIPGDEGKRGPKGD--MGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRD 199
             GP+G+ G +G+RGP G+  +G PG  G PG+   +G+ GP G  G  G   L   D
Sbjct: 2722 KGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALTEDD 2778


>gi|350413972|ref|XP_003490168.1| PREDICTED: lachesin-like [Bombus impatiens]
          Length = 460

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 22/200 (11%)

Query: 283 LLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA 342
           +++PP I+      +S+ ++VREG NV LRC A G P P+I W+  + + I LG+ ++  
Sbjct: 142 VVVPPDILD---YMTSTDMIVREGSNVTLRCAAKGSPTPNITWRREDGETILLGNGEEVR 198

Query: 343 VASS-TLNFTRINRINMGAYMCLADN-VP--------------PQILIRNRRVGVPIGRT 386
           +      N T+INR+ MGAY+C+A N +P              P I I+N+ VG   G+ 
Sbjct: 199 IVEGFIFNITKINRLQMGAYLCIASNGIPPTVSKRIMLTVQFSPMISIQNQLVGAQEGQR 258

Query: 387 ATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446
            TLEC  EAFP S+ YW   +  +I+++    + S      Y+  M+L IS+V +SD+ T
Sbjct: 259 MTLECNSEAFPKSINYWTKENNEIIKNEKYNQTFS---YNEYKVHMKLTISSVEMSDYGT 315

Query: 447 YRCISKNEVDIAKGSLILFE 466
           Y+CISKN +    GS+ L+ 
Sbjct: 316 YKCISKNSLGETDGSIKLYH 335


>gi|18252389|gb|AAL66226.1|AF416482_1 noelin-2 [Xenopus laevis]
          Length = 458

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 128/238 (53%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP    G++  ++M    +   + EYK  + F +     ++ L  P+ G   VV
Sbjct: 219 FGSWMTDPLAPEGDNRVWYMDGYHNNRFVREYKSMEDFMNTDNFTSHRLPHPWSGTGQVV 278

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVD-PNIKLYKT-GYNVMDFSLDENGLW 697
           +N S Y++K  S+ I++FDL S  I+   +L +    N+  Y   G + +D  +DENGLW
Sbjct: 279 YNGSIYFNKFQSHIIIRFDLKSETILKTRSLDSAGYTNVYHYAWGGQSDIDLMVDENGLW 338

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
           V+Y  + N  N  ++KLD  TLQI  TWN     +  G+ F++CG LYV +  +   T +
Sbjct: 339 VVYATNQNAGNIVISKLDPNTLQILKTWNTGYPKRSAGEAFMICGTLYVTNGYSG-GTKV 397

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     ++   + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H I S
Sbjct: 398 HYAYQTNTSNYEYIDIPFHNLYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 455


>gi|148235227|ref|NP_001082198.1| olfactomedin 1 [Xenopus laevis]
 gi|18252391|gb|AAL66227.1|AF416483_1 noelin-1 [Xenopus laevis]
          Length = 485

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 128/238 (53%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP    G++  ++M    +   + EYK  + F +     ++ L  P+ G   VV
Sbjct: 246 FGSWMTDPLAPEGDNRVWYMDGYHNNRFVREYKSMEDFMNTDNFTSHRLPHPWSGTGQVV 305

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVD-PNIKLYKT-GYNVMDFSLDENGLW 697
           +N S Y++K  S+ I++FDL S  I+   +L +    N+  Y   G + +D  +DENGLW
Sbjct: 306 YNGSIYFNKFQSHIIIRFDLKSETILKTRSLDSAGYTNVYHYAWGGQSDIDLMVDENGLW 365

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
           V+Y  + N  N  ++KLD  TLQI  TWN     +  G+ F++CG LYV +  +   T +
Sbjct: 366 VVYATNQNAGNIVISKLDPNTLQILKTWNTGYPKRSAGEAFMICGTLYVTNGYSG-GTKV 424

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     ++   + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H I S
Sbjct: 425 HYAYQTNTSNYEYIDIPFHNLYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 482


>gi|154147585|ref|NP_001093714.1| olfactomedin 1 [Xenopus (Silurana) tropicalis]
 gi|134024458|gb|AAI35744.1| olfm1 protein [Xenopus (Silurana) tropicalis]
          Length = 485

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 128/238 (53%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP    G++  ++M    +   + EYK  + F +     ++ L  P+ G   VV
Sbjct: 246 FGSWMTDPQAPEGDNRVWYMDGYHNNRFVREYKSMEDFMNTDNFTSHRLPHPWSGTGQVV 305

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVD-PNIKLYKT-GYNVMDFSLDENGLW 697
           +N S Y++K  S+ I++FDL S  I+   +L +    N+  Y   G + +D  +DENGLW
Sbjct: 306 YNGSIYFNKFQSHIIIRFDLKSETILKTRSLDSAGYTNVYHYAWGGQSDIDLMVDENGLW 365

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
           V+Y  + N  N  ++KLD  TLQI  +WN     +  G+ F++CG LYV +  +   T +
Sbjct: 366 VVYATNQNAGNIVISKLDPNTLQILKSWNTGYPKRSAGEAFMICGTLYVTNGYSG-GTKV 424

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     ++   + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H I S
Sbjct: 425 HYAYQTNTSNYEYIDIPFHNLYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 482


>gi|80476873|gb|AAI08813.1| LOC398287 protein [Xenopus laevis]
          Length = 485

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 128/238 (53%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP    G++  ++M    +   + EYK  + F +     ++ L  P+ G   VV
Sbjct: 246 FGSWMTDPLAPEGDNRVWYMDGYHNNRFVREYKSMEDFMNTDNFTSHRLPHPWSGTGQVV 305

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVD-PNIKLYKT-GYNVMDFSLDENGLW 697
           +N S Y++K  S+ I++FDL S  I+   +L +    N+  Y   G + +D  +DENGLW
Sbjct: 306 YNGSIYFNKFQSHIIIRFDLKSETILKTRSLDSAGYTNVYHYAWGGQSDIDLMVDENGLW 365

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
           V+Y  + N  N  ++KLD  TLQI  TWN     +  G+ F++CG LYV +  +   T +
Sbjct: 366 VVYATNQNAGNIVISKLDPNTLQILKTWNTGYPKRSAGEAFMICGTLYVTNGYSG-GTKV 424

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     ++   + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H I S
Sbjct: 425 HYAYQTNTSNYEYIDIPFHNLYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 482


>gi|187608240|ref|NP_001119944.1| olfactomedin-like 2A precursor [Danio rerio]
          Length = 645

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 122/237 (51%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP        K ++T      +L E+++ + FK    S  Y L   + G  HVV+
Sbjct: 409 GAWMKDP---MAKDNKIYVTNYYYGNNLVEFRNLENFKQGRWSNLYKLPYNWIGTGHVVY 465

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLS-TVDPNIKLYK-TGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L   V  +   +K  G++ +DF++DE+GLWV
Sbjct: 466 NGAFYYNRAFTKNIIKYDLRMRYVAAWTQLHDAVYEDTTPWKWRGHSDIDFAVDESGLWV 525

Query: 699 IYGL------SNNNTAVTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY         +    ++KLD + L I  + TW   L     G+ F+VCGVLY +D    
Sbjct: 526 IYPALDYDYSQHEVIVISKLDPSDLSIKKETTWRTGLKRNSYGNCFIVCGVLYAIDVYNQ 585

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           +   + +A D + N      L FTN +   T + YN + K LY WD G+ LTY I +
Sbjct: 586 KEGEVLYAYDTHTNTEATPRLPFTNEYAFVTQVDYNPKDKVLYAWDNGHQLTYNIHF 642


>gi|149410289|ref|XP_001506599.1| PREDICTED: noelin-like [Ornithorhynchus anatinus]
          Length = 457

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 126/238 (52%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP  + G++  ++M    +   + EYK    F +     ++ L  P+ G   VV
Sbjct: 218 FGSWMTDPLASEGDNRVWYMDGYHNNRFVREYKSLIDFMNTDNFTSHRLPHPWSGTGQVV 277

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
           +N S Y++K  S+ I++FDL +  I+   +L     N   +    G++ +D  +DENGLW
Sbjct: 278 YNGSIYFNKFQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDENGLW 337

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
            +Y  + N  N  ++KLD  TLQI  TWN +   +  G+ F++CG LYV +  +   T +
Sbjct: 338 AVYATNQNAGNIVISKLDPNTLQILQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 396

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     +    + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H I S
Sbjct: 397 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 454


>gi|242016912|ref|XP_002428939.1| collagen alpha chain, type IV, putative [Pediculus humanus
           corporis]
 gi|212513762|gb|EEB16201.1| collagen alpha chain, type IV, putative [Pediculus humanus
           corporis]
          Length = 132

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/145 (56%), Positives = 94/145 (64%), Gaps = 21/145 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L A+QGFC +TKEYCPPG  G  G  GE G  G  G KGERGE+G             PG
Sbjct: 4   LAAIQGFCAATKEYCPPGPSGKTGPPGEKGPPGMEGQKGERGERG------------FPG 51

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           + G RGP          G+ G+ G RGPKG  G+PG  GLDGRDG+PGEPGLDGIPGR+G
Sbjct: 52  EPGMRGP---------HGLQGEAGPRGPKGTTGWPGAPGLDGRDGVPGEPGLDGIPGRSG 102

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGE 240
           +DG+PG DGLPG  G PG NGT+GE
Sbjct: 103 LDGLPGMDGLPGMHGAPGFNGTDGE 127


>gi|47215161|emb|CAG01427.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 262

 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 131/240 (54%), Gaps = 18/240 (7%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP   SGN +K ++T      +L E+++ ++FK+   + +Y L   + G  HVV+
Sbjct: 26  GAWMKDP--LSGN-DKIYVTNFYYGNNLLEFRNLEVFKTGRFTNSYKLPYNWIGTGHVVY 82

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKTGY-----NVMDFSLDENG 695
           N +FYY + FS  I++FDL   ++     L   D  I+   + +     + + F++DE+G
Sbjct: 83  NGAFYYSRAFSRDIIKFDLRHRQVAAWTMLH--DALIEESSSPWEWRSQSSVTFAVDESG 140

Query: 696 LWVIY------GLSNNNTAVTKLDTATLQIQ--YTWNITLLHKKVGDMFVVCGVLYVVDS 747
           LW++Y              +++L+   L +Q   TW   L   + G+ F+VCGVLY VDS
Sbjct: 141 LWIVYPALDEERFMQEMIVLSRLNPTDLSMQPETTWRTGLKRNRYGNCFIVCGVLYAVDS 200

Query: 748 VTDRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
             +++  + +A D + N  +   + FTN +T TT I YN +   LY WD G+ +TY I++
Sbjct: 201 YNEKDAKLEYAFDTHTNTQMIPRMPFTNNYTYTTQIDYNPKEGVLYAWDNGHQVTYNIKF 260


>gi|444518525|gb|ELV12211.1| Noelin [Tupaia chinensis]
          Length = 485

 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 125/238 (52%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP    G++  ++M    +   + EYK    F +     ++ L  P+ G   VV
Sbjct: 246 FGSWMTDPLAPEGDNRVWYMDGYHNNRFVREYKSMADFMNTDNFTSHRLPHPWSGTGQVV 305

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
           +N S Y++K  S+ I++FDL +  I+   +L     N   +    G++ +D  +DENGLW
Sbjct: 306 YNGSIYFNKFQSHIIIRFDLRTEAILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDENGLW 365

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
            +Y  + N  N  ++KLD  +LQ+  TWN +   +  G+ F++CG LYV +  +   T +
Sbjct: 366 AVYATNQNAGNIVISKLDPTSLQVLQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 424

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     +    + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H I S
Sbjct: 425 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 482


>gi|311893298|ref|NP_001185777.1| noelin isoform 1 [Taeniopygia guttata]
          Length = 485

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP    G ++ ++M +  +   + EYK    F +     ++ L  P+ G   VV
Sbjct: 246 FGSWMTDPLAPEGENKVWYMDSYHNNRFVREYKSMADFMNTDNFTSHRLPHPWSGTGQVV 305

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
           +N S Y++K  S+ I++FDL +  I+   +L     N   +    G++ +D  +DENGLW
Sbjct: 306 YNGSIYFNKYQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDENGLW 365

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
            +Y  + N  N  ++KLD  TLQ   TWN +   +  G+ F++CG LYV +  +   T +
Sbjct: 366 AVYATNQNAGNIVISKLDPNTLQSLQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 424

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     +    + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H I S
Sbjct: 425 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 482


>gi|45382111|ref|NP_990098.1| noelin precursor [Gallus gallus]
 gi|13124385|sp|Q9IAK4.1|NOE1_CHICK RecName: Full=Noelin; AltName: Full=Neuronal olfactomedin-related
           ER localized protein; AltName: Full=Olfactomedin-1;
           AltName: Full=Pancortin; Flags: Precursor
 gi|7211681|gb|AAF40413.1|AF182815_1 neuronal olfactomedin-related ER localized protein [Gallus gallus]
          Length = 485

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP    G ++ ++M +  +   + EYK    F +     ++ L  P+ G   VV
Sbjct: 246 FGSWMTDPLAPEGENKVWYMDSYHNNRFVREYKSMADFMNTDNFTSHRLPHPWSGTGQVV 305

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
           +N S Y++K  S+ I++FDL +  I+   +L     N   +    G++ +D  +DENGLW
Sbjct: 306 YNGSIYFNKYQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDENGLW 365

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
            +Y  + N  N  ++KLD  TLQ   TWN +   +  G+ F++CG LYV +  +   T +
Sbjct: 366 AVYATNQNAGNIVISKLDPNTLQSLQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 424

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     +    + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H I S
Sbjct: 425 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 482


>gi|449269068|gb|EMC79877.1| Noelin, partial [Columba livia]
          Length = 435

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP    G ++ ++M +  +   + EYK    F +     ++ L  P+ G   VV
Sbjct: 196 FGSWMTDPLAPEGENKVWYMDSYHNNRFVREYKSMADFMNTDNFTSHRLPHPWSGTGQVV 255

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
           +N S Y++K  S+ I++FDL +  I+   +L     N   +    G++ +D  +DENGLW
Sbjct: 256 YNGSIYFNKYQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDENGLW 315

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
            +Y  + N  N  ++KLD  TLQ   TWN +   +  G+ F++CG LYV +  +   T +
Sbjct: 316 AVYATNQNAGNIVISKLDPNTLQSLQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 374

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     +    + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H I S
Sbjct: 375 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 432


>gi|301781320|ref|XP_002926070.1| PREDICTED: collagen alpha-1(VII) chain-like [Ailuropoda melanoleuca]
          Length = 2994

 Score =  125 bits (314), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 69/153 (45%), Positives = 91/153 (59%), Gaps = 6/153 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
            PG +GP G+ G+ G+ G +G +G  G KG PG  G PG  G PG +G    RG KGD+G+
Sbjct: 2552 PGEKGPKGEPGDKGSAGLLGARGLTGPKGEPGAAGIPGDPGFPGKDGAPGVRGDKGDVGF 2611

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             GP+G+   +G+RG KG  G  G  G  G  G PG PGL G  G  G  G+PG+ G PGK
Sbjct: 2612 MGPRGL---KGERGVKGACGLDGEKGDKGEAGPPGRPGLAGRKGEMGEPGVPGQSGAPGK 2668

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            +G+ G  G  G  G  G +G++G+ G  G+PGT
Sbjct: 2669 EGLIGPKGDRGFDGQPGSKGDQGEKGERGLPGT 2701



 Score =  122 bits (306), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 71/157 (45%), Positives = 86/157 (54%), Gaps = 19/157 (12%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-VGPPGPQGIPGDEGKRGPKGDMGYP 169
            P GL GP G +GE G KG+ G  G +G+KG   + VGPPGP+G  GD G+RGP       
Sbjct: 2484 PRGLTGPPGSRGERGEKGDTGASGLKGDKGDAAIAVGPPGPRGAKGDMGERGP------- 2536

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGRNGMDGIPGKD 223
                 PG +G +GP+G+ G PG  G  G        GL G  GL G  G  G  GIPG  
Sbjct: 2537 -----PGIDGDKGPRGESGNPGEKGPKGEPGDKGSAGLLGARGLTGPKGEPGAAGIPGDP 2591

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PGKDG PG  G  G+ G  GPRG +G+ G+ G  G
Sbjct: 2592 GFPGKDGAPGVRGDKGDVGFMGPRGLKGERGVKGACG 2628



 Score =  102 bits (254), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 70/171 (40%), Positives = 82/171 (47%), Gaps = 35/171 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG  G      P G PG  G++G  G+ G PG  
Sbjct: 2610 GFMGPRGLKGERGVKGACGLDGEKGDKGEAG------PPGRPGLAGRKGEMGEPGVPGQS 2663

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMD------------ 217
            G PG EG  GPKGD G+ G+ G  G  G  GE   PG  G PG  G D            
Sbjct: 2664 GAPGKEGLIGPKGDRGFDGQPGSKGDQGEKGERGLPGTGGFPGPRGSDGATGPPGPPGSV 2723

Query: 218  ---------GIPGKDGLPGK-----DGIPGTNGTNGEKGMTGPRGNRGKSG 254
                     G  G+ G PG+      G PGT G  GE+G  GP G RG+ G
Sbjct: 2724 GPKGPEGLQGQKGERGPPGERVVGAPGAPGTPGERGEQGRPGPAGPRGEKG 2774



 Score =  102 bits (253), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 66/165 (40%), Positives = 79/165 (47%), Gaps = 20/165 (12%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P GL+G  G KG  G  GE G KGE G  G PG+ G  G  G PG  G+ G  G  G  G
Sbjct: 2614 PRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGRKGEMGEPGVPGQSGAPGKEGLIG 2673

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------------------GIPG 212
            P+G  G +G+ G KGD G  G  GL G  G PG  G D                  G+ G
Sbjct: 2674 PKGDRGFDGQPGSKGDQGEKGERGLPGTGGFPGPRGSDGATGPPGPPGSVGPKGPEGLQG 2733

Query: 213  RNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            + G  G PG+   G PG  G PG  G  G  G  GPRG +G++ +
Sbjct: 2734 QKGERGPPGERVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAAL 2778



 Score =  101 bits (251), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 73/196 (37%), Positives = 90/196 (45%), Gaps = 52/196 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---------------------KGAPGVVGPPGPQ 151
            GLQGP G +G+ G +G  G KG+RG                       GA G  G PG  
Sbjct: 1745 GLQGPAGPQGDPGVRGPAGEKGDRGPPGLDGRGGLDGKPGATGPPGLHGATGKAGDPGRD 1804

Query: 152  GIPG---------------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G+PG                     ++GK G  G  G PG    PG++G++G KGD G P
Sbjct: 1805 GLPGLRGEHGPPGPPGPPGAQGKPGEDGKPGLNGKNGEPGD---PGEDGRKGEKGDSGAP 1861

Query: 191  GRIGLD---GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            GR G D   G  G PG PGL G PG  G  G P   G P   G+PG  G  G++G TGP+
Sbjct: 1862 GREGHDGPKGERGAPGSPGLQGPPGLPGQVG-PSGQGFP---GVPGNMGPKGDRGETGPK 1917

Query: 248  GNRGKSGINGVPGTPA 263
            G +G  G  G+ G P 
Sbjct: 1918 GEQGLPGERGLRGDPG 1933



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 66/153 (43%), Positives = 80/153 (52%), Gaps = 6/153 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QGP+G  G+ G KG+     E G  G PG  G PG +G+ G  G  GPKGD G  G 
Sbjct: 1429 PGPQGPVGPSGQKGEKGDC----EDGAPGLPGQPGSPGERGLRGPPGDIGPKGDRGLKGA 1484

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G  G++G+RG  G +G  G  G+ GR G  G  G  G  GR G  G PG+ G P     
Sbjct: 1485 VGETGEKGERGSAGPVGPQGLPGVAGRPGAEGPEGPPGPAGRRGEKGEPGRPGDPAVG-- 1542

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            P   G  GEKG  GP G RG +G+ G  G P +
Sbjct: 1543 PDGAGAKGEKGDVGPAGPRGAAGVKGERGPPGL 1575



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 74/183 (40%), Positives = 88/183 (48%), Gaps = 32/183 (17%)

Query: 112  PGLQGPIGQKGEIGAKGE---------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PGL    G+KGE G +G+          G  G  GE+G  G+ GP GPQG PG  G  G 
Sbjct: 1707 PGLGA--GEKGEPGDRGQEGPRGPKGDPGPPGASGERGVSGLQGPAGPQGDPGVRGPAGE 1764

Query: 163  KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPG---------------- 203
            KGD G PG  G  G     G  GP G  G  G+ G  GRDGLPG                
Sbjct: 1765 KGDRGPPGLDGRGGLDGKPGATGPPGLHGATGKAGDPGRDGLPGLRGEHGPPGPPGPPGA 1824

Query: 204  --EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              +PG DG PG NG +G PG  G  G+ G  G +G  G +G  GP+G RG  G  G+ G 
Sbjct: 1825 QGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGHDGPKGERGAPGSPGLQGP 1884

Query: 262  PAI 264
            P +
Sbjct: 1885 PGL 1887



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 78/224 (34%), Positives = 92/224 (41%), Gaps = 75/224 (33%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPG--------PQGIPGDEGKR 160
            PG  G  G+KG+ GA   +G  G KGERG  G+PG+ GPPG         QG PG  G  
Sbjct: 1846 PGEDGRKGEKGDSGAPGREGHDGPKGERGAPGSPGLQGPPGLPGQVGPSGQGFPGVPGNM 1905

Query: 161  GPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGR----IGL------------------ 195
            GPKGD G  GP   QG+PG+ G RG  G +G   R    IG+                  
Sbjct: 1906 GPKGDRGETGPKGEQGLPGERGLRGDPGSVGNVERLLETIGIKTSALREIVETWDESSGS 1965

Query: 196  -----DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------------------------- 225
                 + R G  GEPG  G PG+ G  G  G+ GL                         
Sbjct: 1966 FLPMPERRRGPKGEPGERGPPGKEGRIGFSGERGLKGDRGDPGPQGPPGLALGERGPPGP 2025

Query: 226  ---------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                     PG  G+PG  G  GE G  G RG RG+ G  G  G
Sbjct: 2026 PGLAGEPGKPGIPGLPGPAGGTGEAGRPGERGERGEKGERGEQG 2069



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 72/193 (37%), Positives = 85/193 (44%), Gaps = 52/193 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++GAP         G VGP   PGP G PG    
Sbjct: 2237 PGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGVPGSPGLPGPVGPKGEPGPMGAPGQAVV 2296

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG  G+ GD  G+ G KGD G PG  G  G  G  GEP   G PG +G 
Sbjct: 2297 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP---GDPGEDGH 2351

Query: 217  DGIPGKDGLPGKDGI--------------------------------PGTNGTNGEKGMT 244
             G PG  G  G  G+                                PG  G  GE G  
Sbjct: 2352 KGTPGLKGSKGDAGVGVQGPPGPAGPLGLKGDVGPPGPPGAPGVVGFPGQTGPRGEMGQP 2411

Query: 245  GPRGNRGKSGING 257
            GP G RG +G+ G
Sbjct: 2412 GPSGERGLAGLPG 2424



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 77/221 (34%), Positives = 97/221 (43%), Gaps = 70/221 (31%)

Query: 112  PGLQGPIGQKGE---IGAKGE--MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PGL GP+G KGE   +GA G+  +G+ G +GEKGAPG     +VG PG +G  G  G RG
Sbjct: 2273 PGLPGPVGPKGEPGPMGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRG 2332

Query: 162  PKGDMGYPGPQGIPGDEGK------RGPKGDMG--------------------------- 188
             KG+ G  G  G PG++G       +G KGD G                           
Sbjct: 2333 EKGEAGRAGEPGDPGEDGHKGTPGLKGSKGDAGVGVQGPPGPAGPLGLKGDVGPPGPPGA 2392

Query: 189  -----YPGRIGLDGRDGLP---GEPGLDGIPGRN------------------GMDGIPGK 222
                 +PG+ G  G  G P   GE GL G+PGR                   G  G+ G 
Sbjct: 2393 PGVVGFPGQTGPRGEMGQPGPSGERGLAGLPGREGAPGPSGPPGPPGSTGVPGASGLKGD 2452

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G PG  G+PG  G  GE G+ G  G  G+ G  G+ G P 
Sbjct: 2453 KGDPGA-GLPGARGERGEPGVRGEDGRPGQEGPRGLTGPPG 2492



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 76/209 (36%), Positives = 90/209 (43%), Gaps = 61/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP----------------------PGP 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                       G 
Sbjct: 1654 GLRGAPGARGPVGEKGDQGDPGEDGRNGSPGPSGPKGDRGEPGPPGLPGRLVDPGLGAGE 1713

Query: 151  QGIPGDEGKR---------------GPKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGR 192
            +G PGD G+                G +G  G  GP G  GD G RGP   KGD G PG 
Sbjct: 1714 KGEPGDRGQEGPRGPKGDPGPPGASGERGVSGLQGPAGPQGDPGVRGPAGEKGDRGPPGL 1773

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG---------------------KDGI 231
             G  G DG PG  G  G+ G  G  G PG+DGLPG                     +DG 
Sbjct: 1774 DGRGGLDGKPGATGPPGLHGATGKAGDPGRDGLPGLRGEHGPPGPPGPPGAQGKPGEDGK 1833

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG NG NGE G  G  G +G+ G +G PG
Sbjct: 1834 PGLNGKNGEPGDPGEDGRKGEKGDSGAPG 1862



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 74/169 (43%), Positives = 86/169 (50%), Gaps = 23/169 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------------VVGPPGP--Q 151
            PGL GP G  GE G  GE G +GE+GE+G  G                   V  PGP   
Sbjct: 2038 PGLPGPAGGTGEAGRPGERGERGEKGERGEQGRDGTPGLPGPPGPPGPKVTVEEPGPGLS 2097

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G+ G  G +G KG+ G  G QG  GD G  G KGD G PG+ GLDG  GLPGE G+ G P
Sbjct: 2098 GVQGPPGFKGAKGEPGSDGNQGPKGDRGVPGLKGDRGEPGQRGLDGSLGLPGERGVAG-P 2156

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G  G+ G  G PG  G  G  G  G  G+ GP G +G SG+ G PG
Sbjct: 2157 VVAG--GLQGPRGTPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPG 2203



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 67/196 (34%), Positives = 85/196 (43%), Gaps = 54/196 (27%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVG------------------PPGPQGIPGDEGK---- 159
            G+ G +GEMG  G  GE+G  G+ G                   PG  G+ GD+G     
Sbjct: 2400 GQTGPRGEMGQPGPSGERGLAGLPGREGAPGPSGPPGPPGSTGVPGASGLKGDKGDPGAG 2459

Query: 160  -------------RGPKGDMGYPGPQGI---PGDEGKRGPKGD----------------M 187
                         RG  G  G  GP+G+   PG  G+RG KGD                +
Sbjct: 2460 LPGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDTGASGLKGDKGDAAIAV 2519

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G PG  G  G  G  G PG+DG  G  G  G PG+ G  G+ G  G+ G  G +G+TGP+
Sbjct: 2520 GPPGPRGAKGDMGERGPPGIDGDKGPRGESGNPGEKGPKGEPGDKGSAGLLGARGLTGPK 2579

Query: 248  GNRGKSGINGVPGTPA 263
            G  G +GI G PG P 
Sbjct: 2580 GEPGAAGIPGDPGFPG 2595



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 68/195 (34%), Positives = 83/195 (42%), Gaps = 41/195 (21%)

Query: 111  PPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            PPG +G  G+    G  G KG+ GV G +G++G PG  G  G  G+PG+ G  GP    G
Sbjct: 2102 PPGFKGAKGEPGSDGNQGPKGDRGVPGLKGDRGEPGQRGLDGSLGLPGERGVAGPVVAGG 2161

Query: 168  YPGPQGIPGDEGK------------------RGPKGDMGYPGRIGLDGRDGLP------- 202
              GP+G PG  G                   +GP G  G PG  G  GR           
Sbjct: 2162 LQGPRGTPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGL 2221

Query: 203  -------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                         G PGL G  G  G  G PG+DG  GKDG  G  G  G  G+ GP G 
Sbjct: 2222 PGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGVPGSPGLPGPVGP 2281

Query: 250  RGKSGINGVPGTPAI 264
            +G+ G  G PG   +
Sbjct: 2282 KGEPGPMGAPGQAVV 2296



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 77/244 (31%), Positives = 94/244 (38%), Gaps = 81/244 (33%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIPGDE 157
            GF  +  E    G QGP G +G  G KG+ G  G+RG  G+   PG  G  GP    G +
Sbjct: 2104 GFKGAKGEPGSDGNQGPKGDRGVPGLKGDRGEPGQRGLDGSLGLPGERGVAGPVVAGGLQ 2163

Query: 158  GKR---------------------------GPKGDMGYPG-------------------- 170
            G R                           GP G  G PG                    
Sbjct: 2164 GPRGTPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLPG 2223

Query: 171  ---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDG 218
                     PQG PG  G+ G  G  G PGR G  G+D   G PG PG  G+PG  G  G
Sbjct: 2224 PPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGVPGSPGLPGPVGPKG 2283

Query: 219  IPGKDGLPGKD--GIPGTN-----------------GTNGEKGMTGPRGNRGKSGINGVP 259
             PG  G PG+   G+PG                   G  G++G+ GPRG +G++G  G P
Sbjct: 2284 EPGPMGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP 2343

Query: 260  GTPA 263
            G P 
Sbjct: 2344 GDPG 2347



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 75/195 (38%), Positives = 85/195 (43%), Gaps = 60/195 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-----------PGPQGIP---GDE- 157
            GL GP G+KGE G  GE G  GE G KG PG+ G            PGP G     GD  
Sbjct: 2326 GLPGPRGEKGEAGRAGEPGDPGEDGHKGTPGLKGSKGDAGVGVQGPPGPAGPLGLKGDVG 2385

Query: 158  --------------GKRGPKGDMGYPGPQ------GIPGDEGK----------------- 180
                          G+ GP+G+MG PGP       G+PG EG                  
Sbjct: 2386 PPGPPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGLPGREGAPGPSGPPGPPGSTGVPG 2445

Query: 181  -RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
              G KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG+ G  G
Sbjct: 2446 ASGLKGDKGDPGA-------GLPGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERG 2498

Query: 240  EKGMTGPRGNRGKSG 254
            EKG TG  G +G  G
Sbjct: 2499 EKGDTGASGLKGDKG 2513



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 64/191 (33%), Positives = 80/191 (41%), Gaps = 57/191 (29%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER----------------------------GEKGAPG 143
            PG +GP G++G IG  GE G+KG+R                            G+ G PG
Sbjct: 1980 PGERGPPGKEGRIGFSGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPG 2039

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI-----------------------PGDEGK 180
            + GP G  G  G  G+RG +G+ G  G QG                        PG  G 
Sbjct: 2040 LPGPAGGTGEAGRPGERGERGEKGERGEQGRDGTPGLPGPPGPPGPKVTVEEPGPGLSGV 2099

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG- 239
            +GP G  G  G  G DG  G  G+    G+PG  G  G PG+ GL G  G+PG  G  G 
Sbjct: 2100 QGPPGFKGAKGEPGSDGNQGPKGD---RGVPGLKGDRGEPGQRGLDGSLGLPGERGVAGP 2156

Query: 240  --EKGMTGPRG 248
                G+ GPRG
Sbjct: 2157 VVAGGLQGPRG 2167



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 63/183 (34%), Positives = 78/183 (42%), Gaps = 46/183 (25%)

Query: 137  GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGDEGK---------- 180
            G KG+PG    PGP+G PG+ G RGPKG+ G PG        G+PG +G           
Sbjct: 1320 GSKGSPGW---PGPRGEPGERGPRGPKGEPGEPGQVIGGEGPGLPGRKGDPGPPGLPGSR 1376

Query: 181  -------------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                               +G KGD G  G  G       PGEPGL G+PG  G  G  G
Sbjct: 1377 GPLGDPGPRGPPGLPGTAVKGDKGDRGERGPPGSGDGGTAPGEPGLPGLPGSPGPQGPVG 1436

Query: 222  KDGLPGKDG--------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
              G  G+ G        +PG  G+ GE+G+ GP G+ G  G  G+ G       K E  S
Sbjct: 1437 PSGQKGEKGDCEDGAPGLPGQPGSPGERGLRGPPGDIGPKGDRGLKGAVGETGEKGERGS 1496

Query: 274  LLP 276
              P
Sbjct: 1497 AGP 1499



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 73/161 (45%), Gaps = 29/161 (18%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGI- 153
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG   ++GP G +G  
Sbjct: 2622 GVKGACGLDGEKGDKGEAGPPGRPGLAGRKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2681

Query: 154  --PGDEGKRGPKGDMGYPGPQGIPG---------------------DEGKRGPKGDMGYP 190
              PG +G +G KG+ G PG  G PG                      EG +G KG+ G P
Sbjct: 2682 GQPGSKGDQGEKGERGLPGTGGFPGPRGSDGATGPPGPPGSVGPKGPEGLQGQKGERGPP 2741

Query: 191  GR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G   +G  G  G PGE G  G PG  G  G  G+  L   D
Sbjct: 2742 GERVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALTEDD 2782



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 65/150 (43%), Positives = 74/150 (49%), Gaps = 24/150 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------ 158
            PPG  GP G +G  GA GE G KGERG        GP GPQG+PG  G            
Sbjct: 1469 PPGDIGPKGDRGLKGAVGETGEKGERGS------AGPVGPQGLPGVAGRPGAEGPEGPPG 1522

Query: 159  ---KRGPKGDMGYPGPQGI-PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG--LDGIPG 212
               +RG KG+ G PG   + P   G +G KGD+G  G  G  G  G  G PG  L G PG
Sbjct: 1523 PAGRRGEKGEPGRPGDPAVGPDGAGAKGEKGDVGPAGPRGAAGVKGERGPPGLVLPGDPG 1582

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
              G  G  G  GL G+ G PG +G  GEKG
Sbjct: 1583 PKGDPGDRGPIGLTGRAGPPGDSGPPGEKG 1612



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 70/230 (30%), Positives = 86/230 (37%), Gaps = 80/230 (34%)

Query: 113  GLQGPIGQKGEIGAKGE-------MGVKG-----------------------ERGEKGAP 142
            GL G  G +G+ G+ G        +G+K                         RG KG P
Sbjct: 1921 GLPGERGLRGDPGSVGNVERLLETIGIKTSALREIVETWDESSGSFLPMPERRRGPKGEP 1980

Query: 143  GVVGPPGPQGIPGDEGKRGPKGDM----------------------------------GY 168
            G  GPPG +G  G  G+RG KGD                                   G 
Sbjct: 1981 GERGPPGKEGRIGFSGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGL 2040

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------------EPGLDGIPGR 213
            PGP G  G+ G+ G +G+ G  G  G  GRDG PG               EPG  G+ G 
Sbjct: 2041 PGPAGGTGEAGRPGERGERGEKGERGEQGRDGTPGLPGPPGPPGPKVTVEEPG-PGLSGV 2099

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G  G PG DG  G  G  G  G+ G RG  G+ G++G  G P 
Sbjct: 2100 QGPPGFKGAKGEPGSDGNQGPKGDRGVPGLKGDRGEPGQRGLDGSLGLPG 2149



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 62/148 (41%), Positives = 74/148 (50%), Gaps = 17/148 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRG-------- 161
            P   G  G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD G  G        
Sbjct: 1543 PDGAGAKGEKGDVGPAGPRGAAGVKGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1602

Query: 162  -------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                    KGD G PGP G  G  G+ G  G+ G  G  G  G  G  GE GL G PG  
Sbjct: 1603 GDSGPPGEKGDSGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGAR 1662

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            G  G  G  G PG+DG  G+ G +G KG
Sbjct: 1663 GPVGEKGDQGDPGEDGRNGSPGPSGPKG 1690



 Score = 40.8 bits (94), Expect = 3.8,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 79/197 (40%), Gaps = 56/197 (28%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P  +  P GQKGE    GEMGVKG+ G  G PG+ G  G  G  G  G    KG+ G+PG
Sbjct: 1246 PCTVHCPKGQKGE---PGEMGVKGQAGPPGPPGLPGRIGVPGPQGPPGSTAAKGERGFPG 1302

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK-- 228
              G PG  G  G  G           G  G PG PG  G PG  G  G  G+ G PG+  
Sbjct: 1303 ADGPPGIPGLPGTPGS---------PGSKGSPGWPGPRGEPGERGPRGPKGEPGEPGQVI 1353

Query: 229  ----DGIPG--------------------------------TNGTNGEKGMTGPRGN--- 249
                 G+PG                                  G  G++G  GP G+   
Sbjct: 1354 GGEGPGLPGRKGDPGPPGLPGSRGPLGDPGPRGPPGLPGTAVKGDKGDRGERGPPGSGDG 1413

Query: 250  ---RGKSGINGVPGTPA 263
                G+ G+ G+PG+P 
Sbjct: 1414 GTAPGEPGLPGLPGSPG 1430


>gi|431898960|gb|ELK07330.1| Noelin [Pteropus alecto]
          Length = 402

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 124/238 (52%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP    G++  ++M    +   + EYK    F S     ++ L  P+ G   VV
Sbjct: 163 FGSWMTDPLAPEGDNRVWYMDGYHNNRFVREYKSMSDFMSTDNFTSHRLPHPWSGTGQVV 222

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
           +N S Y++K  S+ +++FDL +  I+   +L     N   +    G++ +D   DENGLW
Sbjct: 223 YNGSIYFNKFQSHIVIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMADENGLW 282

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
            +Y  + N  N  ++KLD  +LQ+  +WN +   +  G+ F++CG LYV +  +   T +
Sbjct: 283 AVYATNQNAGNIVISKLDPVSLQVLQSWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 341

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     +    + + F N +++ +M+ YN R + LY W+ G+ + Y +  +H I S
Sbjct: 342 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPRDRALYAWNNGHQILYNVTLFHVIRS 399


>gi|7248902|gb|AAF43715.1|AF239804_1 NOELIN-2 [Gallus gallus]
          Length = 457

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP    G ++ ++M +  +   + EYK    F +     ++ L  P+ G   VV
Sbjct: 218 FGSWMTDPLAPEGENKVWYMDSYHNNRFVREYKSMADFMNTDNFTSHRLPHPWSGTGQVV 277

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
           +N S Y++K  S+ I++FDL +  I+   +L     N   +    G++ +D  +DENGLW
Sbjct: 278 YNGSIYFNKYQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDENGLW 337

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
            +Y  + N  N  ++KLD  TLQ   TWN +   +  G+ F++CG LYV +  +   T +
Sbjct: 338 AVYATNQNAGNIVISKLDPNTLQSLQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 396

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     +    + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H I S
Sbjct: 397 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 454


>gi|327289686|ref|XP_003229555.1| PREDICTED: noelin-like, partial [Anolis carolinensis]
          Length = 435

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 145/294 (49%), Gaps = 25/294 (8%)

Query: 531 FDVKPLGNVSSKGLPNRTLDC-------QVYAVGKPVFHKSTSMKKESSGKPVDVIFGAW 583
           FD + L N  S  L  R   C       ++ A+G P+  K++  +           FG+W
Sbjct: 152 FDYEELQNRVS-NLEERLRACMQKLACGKLTAIGDPITVKTSGSR-----------FGSW 199

Query: 584 MKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNS 643
           M DP    G ++ ++M +  +   + EYK    F +     ++ L  P+ G   VV+N S
Sbjct: 200 MTDPVAPEGENKVWYMDSYHNNRFVREYKSMSDFMNTDNFTSHRLPHPWSGTGQVVYNGS 259

Query: 644 FYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLWVIYG 701
            Y++K  S+ I++FDL +  I+   +L     N   +    G++ +D  +DENGLW +Y 
Sbjct: 260 IYFNKYQSHIIIKFDLKTETILKTRSLDYAGYNNVYHYAWGGHSDIDLMVDENGLWAVYA 319

Query: 702 LSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFAL 759
            + N  N  ++KLD  TLQ   TWN +   +  G+ F++CG LYV +  +   T + +A 
Sbjct: 320 TNQNAGNIVISKLDPNTLQSLQTWNTSYPKRSAGEGFIICGTLYVTNGYSG-GTKVTYAY 378

Query: 760 DLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
               +    + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H + S
Sbjct: 379 QTNTSTYEYIDIPFLNKYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVVRS 432


>gi|311893300|ref|NP_001185778.1| noelin isoform 2 precursor [Taeniopygia guttata]
          Length = 457

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP    G ++ ++M +  +   + EYK    F +     ++ L  P+ G   VV
Sbjct: 218 FGSWMTDPLAPEGENKVWYMDSYHNNRFVREYKSMADFMNTDNFTSHRLPHPWSGTGQVV 277

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
           +N S Y++K  S+ I++FDL +  I+   +L     N   +    G++ +D  +DENGLW
Sbjct: 278 YNGSIYFNKYQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDENGLW 337

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
            +Y  + N  N  ++KLD  TLQ   TWN +   +  G+ F++CG LYV +  +   T +
Sbjct: 338 AVYATNQNAGNIVISKLDPNTLQSLQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 396

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     +    + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H I S
Sbjct: 397 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 454


>gi|326431254|gb|EGD76824.1| collagen type III alpha 1 [Salpingoeca sp. ATCC 50818]
          Length = 1706

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 90/154 (58%), Gaps = 12/154 (7%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMG 167
           P G QGP+G  G  G KG  G+ G +G++G  GV G PGPQG PG    +G +GP GD+G
Sbjct: 273 PIGPQGPVGVPGLQGVKGPQGLPGPQGDQGIKGVQGDPGPQGSPGPSGIQGDKGPVGDIG 332

Query: 168 YPGPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGR---NGMDG 218
            PGPQGIPG +G  GP      KG MG PG IG+ G  G  G  G+ G+ G     G+ G
Sbjct: 333 LPGPQGIPGPKGPTGPVGVRGLKGPMGDPGPIGVQGDVGAQGPQGIKGLQGSQGPQGLKG 392

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G  G PG  G+ G  GT G++G  GP+G RG+
Sbjct: 393 AQGPQGDPGLQGVQGDKGTTGDQGPVGPKGPRGE 426



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 95/181 (52%), Gaps = 30/181 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPPGPQGIPGDEGKRG 161
           P G +GP G  G+ GA G  G+KG+         +G++G+PG +GP GP G+PG +G +G
Sbjct: 231 PQGARGPQGAPGQDGAVGAKGIKGDMGAPGPAGPQGDQGSPGPIGPQGPVGVPGLQGVKG 290

Query: 162 P------------KGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           P            KG  G PGPQG PG    +G +GP GD+G PG  G+ G  G  G  G
Sbjct: 291 PQGLPGPQGDQGIKGVQGDPGPQGSPGPSGIQGDKGPVGDIGLPGPQGIPGPKGPTGPVG 350

Query: 207 LDGI------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G+      PG  G+ G  G  G  G  G+ G+ G  G KG  GP+G+ G  G+ G  G
Sbjct: 351 VRGLKGPMGDPGPIGVQGDVGAQGPQGIKGLQGSQGPQGLKGAQGPQGDPGLQGVQGDKG 410

Query: 261 T 261
           T
Sbjct: 411 T 411



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/184 (42%), Positives = 93/184 (50%), Gaps = 24/184 (13%)

Query: 95  PLVAMQGFCNSTKEY------C---PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV 145
           P V     C  T +Y      C   P G  GP G  G+ GAKG  G +G RG +GAPG  
Sbjct: 185 PAVQSDAQCECTSDYFKNHGTCQQIPIGAPGPKGFTGDTGAKGPQGPQGARGPQGAPGQD 244

Query: 146 GPPGPQGIPGDEGK---RGPKGDMGYP------GPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           G  G +GI GD G     GP+GD G P      GP G+PG +G +GP+   G PG  G  
Sbjct: 245 GAVGAKGIKGDMGAPGPAGPQGDQGSPGPIGPQGPVGVPGLQGVKGPQ---GLPGPQGDQ 301

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G+ G+PG  G PG +   GI G  G  G  G+PG  G  G KG TGP G RG  G  
Sbjct: 302 GIKGVQGDPGPQGSPGPS---GIQGDKGPVGDIGLPGPQGIPGPKGPTGPVGVRGLKGPM 358

Query: 257 GVPG 260
           G PG
Sbjct: 359 GDPG 362



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 62/121 (51%), Gaps = 24/121 (19%)

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGL 201
           +G PGP+G  GD G +GP+G  G  GPQG PG +G    +G KGDMG PG          
Sbjct: 211 IGAPGPKGFTGDTGAKGPQGPQGARGPQGAPGQDGAVGAKGIKGDMGAPG---------- 260

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           P  P         G  G PG  G  G  G+PG  G  G +G+ GP+G++G   I GV G 
Sbjct: 261 PAGP--------QGDQGSPGPIGPQGPVGVPGLQGVKGPQGLPGPQGDQG---IKGVQGD 309

Query: 262 P 262
           P
Sbjct: 310 P 310



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 53/97 (54%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G+ GP G  G +G +G  G  G+ G  G  G VG  GPQGI G +G +GP+G  G  G
Sbjct: 336 PQGIPGPKGPTGPVGVRGLKGPMGDPGPIGVQGDVGAQGPQGIKGLQGSQGPQGLKGAQG 395

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PQG PG +G +G KG  G  G +G  G  G    P L
Sbjct: 396 PQGDPGLQGVQGDKGTTGDQGPVGPKGPRGEDINPAL 432



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 60/113 (53%), Gaps = 9/113 (7%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKG 164
           P G+QG  G  G+IG  G  G+ G +G  G  GV      +G PGP G+ GD G +GP+G
Sbjct: 318 PSGIQGDKGPVGDIGLPGPQGIPGPKGPTGPVGVRGLKGPMGDPGPIGVQGDVGAQGPQG 377

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
             G  G QG  G +G +GP+GD   PG  G+ G  G  G+ G  G  G  G D
Sbjct: 378 IKGLQGSQGPQGLKGAQGPQGD---PGLQGVQGDKGTTGDQGPVGPKGPRGED 427


>gi|291190194|ref|NP_001167088.1| Olfactomedin-like protein 2A [Salmo salar]
 gi|223648052|gb|ACN10784.1| Olfactomedin-like protein 2A precursor [Salmo salar]
          Length = 304

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 122/237 (51%), Gaps = 13/237 (5%)

Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
           GAWMKDP        K ++T      +L E+++ D FK    S  + L   + G  HVV+
Sbjct: 68  GAWMKDP---LAKDSKIYVTNYYYGNNLVEFRNLDNFKQGRWSNLFKLPYNWIGTGHVVY 124

Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
           N +FYY++ F+ +I+++DL    +     L  V  +        G++ +DF++DE+GLWV
Sbjct: 125 NGAFYYNRAFTKNIIKYDLRMRYVAAWTLLHDVVYEDTTPWKWRGHSDIDFAVDESGLWV 184

Query: 699 IYGLSNNNTA------VTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
           IY   + + +      ++KLD   L +  + TW   L     G+ F++CGVLY VD    
Sbjct: 185 IYPSMDYDYSQQEVIVISKLDPGDLSMKKETTWRTGLKRNSYGNCFIICGVLYAVDVYNQ 244

Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
           +   + +A D + N      L FTN +  TT I YN + K LY WD G+ LTY I +
Sbjct: 245 KEGEVNYAYDTHTNSEAIPHLPFTNEYAYTTQIDYNPKEKVLYAWDNGHQLTYNIHF 301


>gi|296399410|gb|ADH10529.1| olfactomedin 1, 3 prime [Zonotrichia albicollis]
          Length = 333

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 6/238 (2%)

Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
           FG+WM DP    G ++ ++M +  +   + EYK    F +     ++ L  P+ G   VV
Sbjct: 94  FGSWMTDPLAPEGENKVWYMDSYHNNRFVREYKSMADFMNTDNFTSHRLPHPWSGTGQVV 153

Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
           +N S Y++K  S+ I++FDL +  I+   +L     N   +    G++ +D  +DENGLW
Sbjct: 154 YNGSIYFNKYQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDENGLW 213

Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
            +Y  + N  N  ++KLD  TLQ   TWN +   +  G+ F++CG LYV +  +   T +
Sbjct: 214 AVYATNQNAGNIVISKLDPNTLQSLQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 272

Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
            +A     +    + + F N +++ +M+ YN + + LY W+ G+ + Y +  +H I S
Sbjct: 273 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 330


>gi|291393629|ref|XP_002713393.1| PREDICTED: alpha 1 type VII collagen [Oryctolagus cuniculus]
          Length = 2937

 Score =  123 bits (308), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 72/161 (44%), Positives = 93/161 (57%), Gaps = 18/161 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
            PG +G  G+ G+ G+ G +G +G  G KG PG  G PG  G PG +G    RG KGD+GY
Sbjct: 2559 PGDKGSKGEPGDKGSAGSLGARGLSGPKGEPGAAGIPGEPGSPGKDGAPGVRGDKGDIGY 2618

Query: 169  PGPQGIPGD---------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             GP+G+ G+         +G++G KG+ G PGR GL GR G  GEPG+ G P      G 
Sbjct: 2619 MGPRGLKGERGVKGACGLDGEKGDKGEAGQPGRPGLAGRKGEMGEPGVPGQP------GA 2672

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGK+GL G  G  G +G  G KG  G +G RG +G+ G PG
Sbjct: 2673 PGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPAGVGGFPG 2713



 Score =  119 bits (297), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 77/182 (42%), Positives = 95/182 (52%), Gaps = 31/182 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-VGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            GL GP G +GE G KG+ G  G +G+KG   V VGPPGP+G  GD G+RGP+G  G  GP
Sbjct: 2493 GLAGPPGSRGERGEKGDAGTAGLKGDKGDSAVIVGPPGPRGAKGDAGERGPRGVDGDKGP 2552

Query: 172  QGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG---MDGIPG---- 221
            +G    PGD+G +G  GD G  G +G  G  G  GEPG  GIPG  G    DG PG    
Sbjct: 2553 RGDSGDPGDKGSKGEPGDKGSAGSLGARGLSGPKGEPGAAGIPGEPGSPGKDGAPGVRGD 2612

Query: 222  --------KDGLPGKDGIPGTNGTNGEKG------------MTGPRGNRGKSGINGVPGT 261
                      GL G+ G+ G  G +GEKG            + G +G  G+ G+ G PG 
Sbjct: 2613 KGDIGYMGPRGLKGERGVKGACGLDGEKGDKGEAGQPGRPGLAGRKGEMGEPGVPGQPGA 2672

Query: 262  PA 263
            P 
Sbjct: 2673 PG 2674



 Score =  113 bits (283), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 73/168 (43%), Positives = 88/168 (52%), Gaps = 18/168 (10%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMG 167
            PPG +G  G  GE G +G  G KG RG+ G PG     G PG +G  G  G RG  G  G
Sbjct: 2528 PPGPRGAKGDAGERGPRGVDGDKGPRGDSGDPGDKGSKGEPGDKGSAGSLGARGLSGPKG 2587

Query: 168  YPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             PG  GIPG+ G          RG KGD+GY G  GL G  G+ G  GLDG  G  G  G
Sbjct: 2588 EPGAAGIPGEPGSPGKDGAPGVRGDKGDIGYMGPRGLKGERGVKGACGLDGEKGDKGEAG 2647

Query: 219  IPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG+ GL G+       G+PG  G  G++G+ GP+G+RG  G  G  G
Sbjct: 2648 QPGRPGLAGRKGEMGEPGVPGQPGAPGKEGLIGPKGDRGFDGQPGPKG 2695



 Score =  103 bits (256), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 70/154 (45%), Positives = 87/154 (56%), Gaps = 14/154 (9%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
            GL G  G KGE G  G  G+ G +GE G PGV   PG  G PG EG  GPKGD G+   P
Sbjct: 2635 GLDGEKGDKGEAGQPGRPGLAGRKGEMGEPGV---PGQPGAPGKEGLIGPKGDRGFDGQP 2691

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------DGIPGRNGMDGIPGKD 223
            GP+G  G++G+RGP G  G+PG  G +G  G PG PG       +G+ G+ G  G PG+ 
Sbjct: 2692 GPKGDQGEKGERGPAGVGGFPGPRGNEGSPGPPGPPGSVGPKGSEGLQGQKGERGPPGES 2751

Query: 224  --GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
              G PG  G PG  G  G  G  GPRG +G++ +
Sbjct: 2752 VAGAPGVPGAPGERGEQGRPGPAGPRGEKGEAAL 2785



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 69/177 (38%), Positives = 85/177 (48%), Gaps = 35/177 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGDM 166
            G  G  G KG+IG  G  G+KGERG KGA G+ G  G +G       PG  G++G  G+ 
Sbjct: 2605 GAPGVRGDKGDIGYMGPRGLKGERGVKGACGLDGEKGDKGEAGQPGRPGLAGRKGEMGEP 2664

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPG----------- 212
            G PG  G PG EG  GPKGD G+ G+ G  G  G  GE    G+ G PG           
Sbjct: 2665 GVPGQPGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPAGVGGFPGPRGNEGSPGPP 2724

Query: 213  ----------RNGMDGIPGKDGLPGKD-----GIPGTNGTNGEKGMTGPRGNRGKSG 254
                        G+ G  G+ G PG+      G+PG  G  GE+G  GP G RG+ G
Sbjct: 2725 GPPGSVGPKGSEGLQGQKGERGPPGESVAGAPGVPGAPGERGEQGRPGPAGPRGEKG 2781



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 92/209 (44%), Gaps = 61/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP----------------------PGP 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                       G 
Sbjct: 1658 GLRGAPGARGPVGEKGDQGDPGEDGRNGSPGPSGPKGDRGEPGPPGPPGRLVDAGLGAGE 1717

Query: 151  QGIPGDEGKRGP---------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
            +G PGD G+ GP               +G  G  GP G+ GD G RGP G+ G  G  GL
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGPPGAPGERGIDGLRGPPGLQGDPGVRGPAGEKGDRGPAGL 1777

Query: 196  DGRDGLP------------GEPGLDGIPGRNGMDGIPGKD------------GLPGKDGI 231
            DGR GL             G  G  G PGR+G+ G+ G+             G PG+DG 
Sbjct: 1778 DGRSGLDGKPGAPGPPGLHGAAGKAGDPGRDGLPGLRGEHGPPGPPGSPGALGKPGEDGK 1837

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG NG NGE G  G  G +G+ G  G PG
Sbjct: 1838 PGLNGKNGEPGDPGEDGRKGEKGDPGAPG 1866



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 68/183 (37%), Positives = 78/183 (42%), Gaps = 47/183 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGE---------------------------------RG 137
            PPG+ GP G +G  GA GE G KG+                                 RG
Sbjct: 1472 PPGVTGPKGDRGLTGAPGEAGEKGQRGPPGPAGPQGLPGLAGRPGAEGPEGPPGPAGRRG 1531

Query: 138  EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            EKG PG  G P   G P  EG +G KGD G  GP+G  G +G+RGP G            
Sbjct: 1532 EKGEPGRPGDPAVVG-PAGEGVKGEKGDAGPAGPRGAAGVKGERGPPG------------ 1578

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
               LPG+PG  G PG  G  G  G+ G PG  G  G  G  G  G  GP G RG+ G  G
Sbjct: 1579 -LALPGDPGPKGDPGDRGPIGFTGRAGPPGDSGPSGEKGDPGRPGPAGPVGPRGRDGEAG 1637

Query: 258  VPG 260
              G
Sbjct: 1638 EKG 1640



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 70/151 (46%), Positives = 81/151 (53%), Gaps = 11/151 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMGYP 169
            P  +G  G+KG+ G  G  G  G +GE+G PG+   G PGP+G PGD   RGP G  G  
Sbjct: 1547 PAGEGVKGEKGDAGPAGPRGAAGVKGERGPPGLALPGDPGPKGDPGD---RGPIGFTGRA 1603

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP   PGD G  G KGD G PG  G  G  G  GE G  G  G  G  G+PGK G  G  
Sbjct: 1604 GP---PGDSGPSGEKGDPGRPGPAGPVGPRGRDGEAGEKGDEGPPGDPGLPGKAGERGLR 1660

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG  G  GEK   G +G+ G+ G NG PG
Sbjct: 1661 GAPGARGPVGEK---GDQGDPGEDGRNGSPG 1688



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 69/188 (36%), Positives = 85/188 (45%), Gaps = 42/188 (22%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPG--VV 145
            PGL G +G+ G+ GA G  G  G+ G++                        GAPG  VV
Sbjct: 2241 PGLPGQVGETGKPGAPGRDGASGKDGDRGGPGVPGSPGLPGPVGPKGEPGPVGAPGQAVV 2300

Query: 146  GPPG-------PQGIPGD-EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            GPPG       P G+ GD  G+ G KGD G PGP+G  G+ G+ G  GD G  G+ G  G
Sbjct: 2301 GPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPG 2360

Query: 198  RDGLPGEPGLDGIPGR--------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
              G  G+PG+               G  G  G+ G PG  G PG  G  GE G  GP G 
Sbjct: 2361 PKGHKGDPGVGLQGPPGPSGPPGIKGDLGPQGRPGTPGVVGFPGQTGPRGETGQPGPVGE 2420

Query: 250  RGKSGING 257
            RG +G  G
Sbjct: 2421 RGLAGPPG 2428



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 70/201 (34%), Positives = 89/201 (44%), Gaps = 42/201 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD-----------EGKRG 161
            GL GP G+KGE G  GE G  GE G+KGAPG  G  G  G+              +G  G
Sbjct: 2330 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGHKGDPGVGLQGPPGPSGPPGIKGDLG 2389

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE----------------- 204
            P+G  G PG  G P   G+ GP+G+ G PG +G  G  G PG                  
Sbjct: 2390 PQGRPGTPGVVGFP---GQTGPRGETGQPGPVGERGLAGPPGREGAPGLLGPPGPPGLAV 2446

Query: 205  ----------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                      P   G PG  G+ G  G+ G PG  G  G  G  G +G+ GP G+RG+ G
Sbjct: 2447 SGRPPRAALVPSPCGDPGA-GLPGPRGERGEPGVRGEEGPPGREGSRGLAGPPGSRGERG 2505

Query: 255  INGVPGTPAICAYKRESCSLL 275
              G  GT  +   K +S  ++
Sbjct: 2506 EKGDAGTAGLKGDKGDSAVIV 2526



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 69/192 (35%), Positives = 79/192 (41%), Gaps = 39/192 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK-----------------GAP------------ 142
            PG  GP G+ G+ G  GE G+ G  G +                 G P            
Sbjct: 2403 PGQTGPRGETGQPGPVGERGLAGPPGREGAPGLLGPPGPPGLAVSGRPPRAALVPSPCGD 2462

Query: 143  ---GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
               G+ GP G +G PG  G+ GP G  G  G  G PG  G+RG KGD G  G  G  G  
Sbjct: 2463 PGAGLPGPRGERGEPGVRGEEGPPGREGSRGLAGPPGSRGERGEKGDAGTAGLKGDKGDS 2522

Query: 200  ----GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGK 252
                G PG  G  G  G  G  G+ G  G  G  G PG  G+ GE   KG  G  G RG 
Sbjct: 2523 AVIVGPPGPRGAKGDAGERGPRGVDGDKGPRGDSGDPGDKGSKGEPGDKGSAGSLGARGL 2582

Query: 253  SGINGVPGTPAI 264
            SG  G PG   I
Sbjct: 2583 SGPKGEPGAAGI 2594



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 73/188 (38%), Positives = 86/188 (45%), Gaps = 38/188 (20%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEK---------------GAPGVVGPPGPQGIPG 155
            PPGLQG  G +G  G KG+ G  G  G                 GA G  G PG  G+PG
Sbjct: 1753 PPGLQGDPGVRGPAGEKGDRGPAGLDGRSGLDGKPGAPGPPGLHGAAGKAGDPGRDGLPG 1812

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
              G+ GP G  G PG  G PG++GK G  G  G PG  G DGR G  G+P   G PGR G
Sbjct: 1813 LRGEHGPPGPPGSPGALGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDP---GAPGREG 1869

Query: 216  MDGIPGKDGLP--------------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             DG  G+ G P                    G  GIPG+ G  G++G TG +G +G  G 
Sbjct: 1870 YDGPKGERGAPGSPGPQGPPGLPGQVGPSGQGFPGIPGSVGPKGDRGETGSKGEQGLPGE 1929

Query: 256  NGVPGTPA 263
             G  G P 
Sbjct: 1930 RGPRGEPG 1937



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 68/197 (34%), Positives = 86/197 (43%), Gaps = 55/197 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
            PG +GPIG  G  G  G+ G  GE+G+ G PG  GP GP+G  G+ G++G +G  G P  
Sbjct: 1591 PGDRGPIGFTGRAGPPGDSGPSGEKGDPGRPGPAGPVGPRGRDGEAGEKGDEGPPGDPGL 1650

Query: 170  ----GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------- 206
                G +G+ G  G RGP G+ G  G  G DGR+G PG  G                   
Sbjct: 1651 PGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRNGSPGPSGPKGDRGEPGPPGPPGRLVD 1710

Query: 207  ------LDGIPG---------------------RNGMDGIPGKDGLPGKDGIPGTNGTNG 239
                    G PG                       G+DG+ G    PG  G PG  G  G
Sbjct: 1711 AGLGAGEKGEPGDRGQEGPRGPKGDPGPPGAPGERGIDGLRGP---PGLQGDPGVRGPAG 1767

Query: 240  EKGMTGPRGNRGKSGIN 256
            EKG  GP G  G+SG++
Sbjct: 1768 EKGDRGPAGLDGRSGLD 1784



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 69/219 (31%), Positives = 90/219 (41%), Gaps = 69/219 (31%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVV------GPPGPQ------------- 151
            ++G +G +G  G  G +G  G+   RGE G PG V      GPPG +             
Sbjct: 2384 IKGDLGPQGRPGTPGVVGFPGQTGPRGETGQPGPVGERGLAGPPGREGAPGLLGPPGPPG 2443

Query: 152  ----------------------GIPGDEGKRGPKGDMGYPGP---------QGIPGDEGK 180
                                  G+PG  G+RG  G  G  GP          G PG  G+
Sbjct: 2444 LAVSGRPPRAALVPSPCGDPGAGLPGPRGERGEPGVRGEEGPPGREGSRGLAGPPGSRGE 2503

Query: 181  RGPKGD----------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            RG KGD                +G PG  G  G  G  G  G+DG  G  G  G PG  G
Sbjct: 2504 RGEKGDAGTAGLKGDKGDSAVIVGPPGPRGAKGDAGERGPRGVDGDKGPRGDSGDPGDKG 2563

Query: 225  LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G+ G  G+ G+ G +G++GP+G  G +GI G PG+P 
Sbjct: 2564 SKGEPGDKGSAGSLGARGLSGPKGEPGAAGIPGEPGSPG 2602



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 84/180 (46%), Gaps = 29/180 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL+GP G +G+ G +G  G KG+RG  G  G  G  G  G PG  G  G  G  G PG  
Sbjct: 1749 GLRGPPGLQGDPGVRGPAGEKGDRGPAGLDGRSGLDGKPGAPGPPGLHGAAGKAGDPGRD 1808

Query: 173  GIPGDEGKRGPK---------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G+PG  G+ GP          G  G  G+ GL+G++G PG+PG DG  G  G  G PG++
Sbjct: 1809 GLPGLRGEHGPPGPPGSPGALGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDPGAPGRE 1868

Query: 224  GLPGKDGI--------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G                     P   G  G  G  GP+G+RG++G  G  G P 
Sbjct: 1869 GYDGPKGERGAPGSPGPQGPPGLPGQVGPSGQGFPGIPGSVGPKGDRGETGSKGEQGLPG 1928



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 74/249 (29%), Positives = 94/249 (37%), Gaps = 93/249 (37%)

Query: 108  EYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            E  PPGL+G  G+    G+ G KG+ G  G +GE+G PG  G  G  G+PG+ G  GP+G
Sbjct: 2103 EQGPPGLKGAKGEPGSDGDRGPKGDRGTPGTKGEQGEPGQRGQNGSPGLPGERGVAGPEG 2162

Query: 165  DMGYPGPQ------------------GIPGDEGKRGPKGDMGYPGR-------------- 192
              G  GP+                  G+ G  G +GP G  G PG               
Sbjct: 2163 KPGLQGPRGAPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGA 2222

Query: 193  ------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG---------------- 224
                        +G  G  GLPG+ G  G PG  G DG  GKDG                
Sbjct: 2223 VGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGGPGVPGSPGLPGP 2282

Query: 225  -----LPGKDGIPGTN-------------------------GTNGEKGMTGPRGNRGKSG 254
                  PG  G PG                           G  G++G+ GPRG +G++G
Sbjct: 2283 VGPKGEPGPVGAPGQAVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAG 2342

Query: 255  INGVPGTPA 263
              G PG P 
Sbjct: 2343 RAGEPGDPG 2351



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 72/236 (30%), Positives = 88/236 (37%), Gaps = 90/236 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------------- 152
            PGL G   + GE G  GE G KGE+G+ GAPG  G  GP+G                   
Sbjct: 1838 PGLNG---KNGEPGDPGEDGRKGEKGDPGAPGREGYDGPKGERGAPGSPGPQGPPGLPGQ 1894

Query: 153  ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI----GL--- 195
                      IPG  G +G +G+ G  G QG+PG+ G RG  G M    R+    G+   
Sbjct: 1895 VGPSGQGFPGIPGSVGPKGDRGETGSKGEQGLPGERGPRGEPGSMVNVERLLETAGIKPS 1954

Query: 196  --------------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG-------- 227
                                + R G  G+PG  G  G+ G  G PG+ GL G        
Sbjct: 1955 ALREIVESWDESSGSFLPVPERRRGPKGDPGERGPAGKEGPIGFPGERGLKGDRGDPGPQ 2014

Query: 228  -----------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                                   K GIPG  G  GE G  G  G RG+ G  G PG
Sbjct: 2015 GPPGLALGERGPPGPPGLAGEPGKPGIPGLPGRAGETGEAGRPGERGERGEKGAPG 2070



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 88/261 (33%), Gaps = 108/261 (41%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------VGPP----------- 148
            PG  GP G +GE G+KGE G+ GERG +G PG             + P            
Sbjct: 1906 PGSVGPKGDRGETGSKGEQGLPGERGPRGEPGSMVNVERLLETAGIKPSALREIVESWDE 1965

Query: 149  -------------GPQGIPGDEGKRGPKGDMGYPGPQG---------------------- 173
                         GP+G PG+ G  G +G +G+PG +G                      
Sbjct: 1966 SSGSFLPVPERRRGPKGDPGERGPAGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERG 2025

Query: 174  ---------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE-------------- 204
                           IPG  G+ G  G+ G PG  G  G  G PGE              
Sbjct: 2026 PPGPPGLAGEPGKPGIPGLPGRAGETGEAGRPGERGERGEKGAPGEQGRDGPPGPPGAPG 2085

Query: 205  ---------------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
                                 PGL G  G  G DG  G  G  G  G  G  G  G++G 
Sbjct: 2086 PPGPKVALDESGPRLPGEQGPPGLKGAKGEPGSDGDRGPKGDRGTPGTKGEQGEPGQRGQ 2145

Query: 244  TGPRGNRGKSGINGVPGTPAI 264
             G  G  G+ G+ G  G P +
Sbjct: 2146 NGSPGLPGERGVAGPEGKPGL 2166



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 59/133 (44%), Positives = 71/133 (53%), Gaps = 11/133 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
            PG+ G  G+ GE G  G  G +GERGEKGAPG  G  GP G PG  G  GPK  +     
Sbjct: 2039 PGIPGLPGRAGETGEAGRPGERGERGEKGAPGEQGRDGPPGPPGAPGPPGPKVALDESGP 2098

Query: 167  ---GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
               G  GP G+ G +G+ G  GD G  G  G  G  G  GEPG     G+NG  G+PG+ 
Sbjct: 2099 RLPGEQGPPGLKGAKGEPGSDGDRGPKGDRGTPGTKGEQGEPGQR---GQNGSPGLPGER 2155

Query: 224  GLPGKDGIPGTNG 236
            G+ G +G PG  G
Sbjct: 2156 GVAGPEGKPGLQG 2168



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 59/130 (45%), Positives = 67/130 (51%), Gaps = 1/130 (0%)

Query: 135  ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
            E G  G PG  G PG  G+ G  G  GPKGD G  G  G  G++G+RGP G  G  G  G
Sbjct: 1451 EDGAPGLPGQPGTPGEPGLRGPPGVTGPKGDRGLTGAPGEAGEKGQRGPPGPAGPQGLPG 1510

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            L GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  GP G RG +G
Sbjct: 1511 LAGRPGAEGPEGPPGPAGRRGEKGEPGRPGDPAVVG-PAGEGVKGEKGDAGPAGPRGAAG 1569

Query: 255  INGVPGTPAI 264
            + G  G P +
Sbjct: 1570 VKGERGPPGL 1579



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 73/241 (30%), Positives = 88/241 (36%), Gaps = 93/241 (38%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKR--------- 160
            G +GP G +G  G KGE G  G+RG+ G+PG+ G     GP+G PG +G R         
Sbjct: 2120 GDRGPKGDRGTPGTKGEQGEPGQRGQNGSPGLPGERGVAGPEGKPGLQGPRGAPGPAGGH 2179

Query: 161  ------------------GPKGDMGYPG-----------------------------PQG 173
                              GP G  G PG                             PQG
Sbjct: 2180 GDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLPGPPGPSGLVGPQG 2239

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPGR-- 213
             PG  G+ G  G  G PGR G  G+DG                    GEPG  G PG+  
Sbjct: 2240 SPGLPGQVGETGKPGAPGRDGASGKDGDRGGPGVPGSPGLPGPVGPKGEPGPVGAPGQAV 2299

Query: 214  ------NGMDGIPG--------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                   G  G PG        + G  G  G+PG  G  GE G  G  G+ G+ G  G P
Sbjct: 2300 VGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAP 2359

Query: 260  G 260
            G
Sbjct: 2360 G 2360



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 75/239 (31%), Positives = 89/239 (37%), Gaps = 75/239 (31%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM----GVKG--------------------- 134
            +G   S  E   PG +GP G+ G +     +    G+K                      
Sbjct: 1915 RGETGSKGEQGLPGERGPRGEPGSMVNVERLLETAGIKPSALREIVESWDESSGSFLPVP 1974

Query: 135  --ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ-------------------- 172
               RG KG PG  GP G +G  G  G+RG KGD G PGPQ                    
Sbjct: 1975 ERRRGPKGDPGERGPAGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAG 2034

Query: 173  -----GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG------------------ 209
                 GIPG  G+ G  G+ G PG  G  G  G PGE G DG                  
Sbjct: 2035 EPGKPGIPGLPGRAGETGEAGRPGERGERGEKGAPGEQGRDGPPGPPGAPGPPGPKVALD 2094

Query: 210  -----IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                 +PG  G  G+ G  G PG DG  G  G  G  G  G +G  G+ G NG PG P 
Sbjct: 2095 ESGPRLPGEQGPPGLKGAKGEPGSDGDRGPKGDRGTPGTKGEQGEPGQRGQNGSPGLPG 2153



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 67/143 (46%), Gaps = 20/143 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMG-----VKGERGEKGAPG---------VVGPPGPQGIPGDEG 158
            G  GP G +G  G KGE G     + G+ G KG PG           GPPG  G  G+  
Sbjct: 1557 GDAGPAGPRGAAGVKGERGPPGLALPGDPGPKGDPGDRGPIGFTGRAGPPGDSGPSGE-- 1614

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
                KGD G PGP G  G  G+ G  G+ G  G  G  G  G  GE GL G PG  G  G
Sbjct: 1615 ----KGDPGRPGPAGPVGPRGRDGEAGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVG 1670

Query: 219  IPGKDGLPGKDGIPGTNGTNGEK 241
              G  G PG+DG  G+ G +G K
Sbjct: 1671 EKGDQGDPGEDGRNGSPGPSGPK 1693



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 60/174 (34%), Positives = 71/174 (40%), Gaps = 38/174 (21%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGY---------- 168
            G+ G  G+ G+ G+ GE G PG  G  G +   G PG EG  GPKG+ G           
Sbjct: 1830 GKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDPGAPGREGYDGPKGERGAPGSPGPQGPP 1889

Query: 169  -------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR-------- 213
                   P  QG PG  G  GPKGD    G  G  G  GLPGE G  G PG         
Sbjct: 1890 GLPGQVGPSGQGFPGIPGSVGPKGDR---GETGSKGEQGLPGERGPRGEPGSMVNVERLL 1946

Query: 214  --NGMDGIPGKDGLPGKDG-----IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G+     ++ +   D      +P      G KG  G RG  GK G  G PG
Sbjct: 1947 ETAGIKPSALREIVESWDESSGSFLPVPERRRGPKGDPGERGPAGKEGPIGFPG 2000



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/160 (35%), Positives = 75/160 (46%), Gaps = 34/160 (21%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGP------- 147
             ++G C    E    G  G  G+ G  G KGEMG  G  G+ GAPG   ++GP       
Sbjct: 2629 GVKGACGLDGEKGDKGEAGQPGRPGLAGRKGEMGEPGVPGQPGAPGKEGLIGPKGDRGFD 2688

Query: 148  --PGPQGIPGDEGKRGP---------KGDM------GYPGPQGIPGDEGKRGPKGDMGYP 190
              PGP+G  G++G+RGP         +G+       G PG  G  G EG +G KG+ G P
Sbjct: 2689 GQPGPKGDQGEKGERGPAGVGGFPGPRGNEGSPGPPGPPGSVGPKGSEGLQGQKGERGPP 2748

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            G       + + G PG+ G PG  G  G PG  G  G+ G
Sbjct: 2749 G-------ESVAGAPGVPGAPGERGEQGRPGPAGPRGEKG 2781



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 52/113 (46%), Gaps = 26/113 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------------------Q 151
            GL GP G +G  G  G  G +GE+GE+G  GV G PGP                     +
Sbjct: 2677 GLIGPKGDRGFDGQPGPKGDQGEKGERGPAGVGGFPGPRGNEGSPGPPGPPGSVGPKGSE 2736

Query: 152  GIPGDEGKRGPKGDM-----GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G+ G +G+RGP G+      G PG  G  G++G+ GP G  G  G   L   D
Sbjct: 2737 GLQGQKGERGPPGESVAGAPGVPGAPGERGEQGRPGPAGPRGEKGEAALTEDD 2789



 Score = 50.4 bits (119), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/117 (39%), Positives = 55/117 (47%), Gaps = 21/117 (17%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------GPQGIPGDEGKRGP 162
            +CP G +G  GQ G  G  G  G  G  G  GAPG  GPP      G +G PG +G  G 
Sbjct: 1250 HCPKGEKGEPGQLGPPGQAGPPGAPGLPGRTGAPGPQGPPRRTNAKGERGFPGVDGLPGS 1309

Query: 163  KGDM---------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             G                 G+ GP+G PG+ G RG KG+ G PGRI      GLPG+
Sbjct: 1310 PGRPGPPGTPGAPGPKGSPGWAGPRGEPGEPGPRGLKGEPGEPGRIFGGEGPGLPGQ 1366


>gi|440893705|gb|ELR46375.1| Collagen alpha-1(VII) chain [Bos grunniens mutus]
          Length = 2948

 Score =  123 bits (308), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 70/152 (46%), Positives = 89/152 (58%), Gaps = 2/152 (1%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKGDMGYP 169
            P GL GP G +GE G KG+ G  G +G+KG   V+ GPPGP+G  GD G+RGP+G  G  
Sbjct: 2486 PRGLAGPPGIRGERGEKGDAGASGLKGDKGDSAVILGPPGPRGAKGDSGERGPRGIDGDK 2545

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI-PGKDGLPGK 228
            GP+G  G+ G++G KG+ G  G  GL G  GL G      IP    +  + P   G PGK
Sbjct: 2546 GPRGDSGEPGEKGTKGEPGDKGSAGLLGARGLTGPKATRVIPFEPSLTSLTPFPQGSPGK 2605

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            DG+PG  G  G+ G  GPRG +G+ GI G  G
Sbjct: 2606 DGVPGVRGDKGDVGFMGPRGLKGERGIKGACG 2637



 Score =  109 bits (273), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 94/180 (52%), Gaps = 28/180 (15%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------ 147
            +G    + E  P G+ G  G +G+ G  GE G KGE G+KG+ G++G             
Sbjct: 2527 RGAKGDSGERGPRGIDGDKGPRGDSGEPGEKGTKGEPGDKGSAGLLGARGLTGPKATRVI 2586

Query: 148  ----------PGPQGIPGDEGK---RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
                      P PQG PG +G    RG KGD+G+ GP+G+   +G+RG KG  G  G  G
Sbjct: 2587 PFEPSLTSLTPFPQGSPGKDGVPGVRGDKGDVGFMGPRGL---KGERGIKGACGLDGEKG 2643

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              G  G PG PGL G  G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G
Sbjct: 2644 DKGEAGPPGRPGLAGRRGELGEPGVPGQAGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKG 2703



 Score =  108 bits (271), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 38/182 (20%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGDM- 166
            ++GP G+KG+   +G  G+ G  G  G PG  GPPGP G       PG +G  G +G+  
Sbjct: 1760 VRGPAGEKGD---RGPPGLDGRSGLDGKPGASGPPGPNGAMGKAGDPGRDGLPGLRGEQG 1816

Query: 167  -----------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                                   G  G  G PG++G++G KGD G PGR   +GRDG  G
Sbjct: 1817 PPGPAGPPGAPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGR---EGRDGPKG 1873

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            E G  G PG  G  G+PG+ G PG+   G+PG++G  G++G TGPRG +G  G  G+ G 
Sbjct: 1874 ERGAPGSPGLQGPPGLPGQVGPPGQGFPGVPGSSGPKGDRGETGPRGEQGLPGERGLRGE 1933

Query: 262  PA 263
            P 
Sbjct: 1934 PG 1935



 Score =  100 bits (249), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 94/180 (52%), Gaps = 28/180 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IPG 155
            PPGL G  G  G+ GA G  G  G  G+ G PG  G PG +G                PG
Sbjct: 1772 PPGLDGRSGLDGKPGASGPPGPNGAMGKAGDPGRDGLPGLRGEQGPPGPAGPPGAPGKPG 1831

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            ++GK G  G  G PG    PG++G++G KGD G PGR   +GRDG  GE G  G PG  G
Sbjct: 1832 EDGKPGLNGKNGEPGD---PGEDGRKGEKGDSGAPGR---EGRDGPKGERGAPGSPGLQG 1885

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              G+PG+ G PG+ G PG  G+      +GP+G+RG++G  G  G P     + E  SL+
Sbjct: 1886 PPGLPGQVGPPGQ-GFPGVPGS------SGPKGDRGETGPRGEQGLPGERGLRGEPGSLV 1938



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 68/181 (37%), Positives = 85/181 (46%), Gaps = 38/181 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDM 166
            G+ G  G KG++G  G  G+KGERG KGA G+       G  GP G PG  G+RG  G+ 
Sbjct: 2607 GVPGVRGDKGDVGFMGPRGLKGERGIKGACGLDGEKGDKGEAGPPGRPGLAGRRGELGEP 2666

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------- 204
            G PG  G PG EG  GPKGD G+ G+ G  G  G  GE                      
Sbjct: 2667 GVPGQAGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPPGVGGFPGPRGSDGSSGPP 2726

Query: 205  --------PGLDGIPGRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                     G +G+ G+ G  G PG+   G PG  G PG  G  G  G  GPRG +G++ 
Sbjct: 2727 GPPGSIGPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAA 2786

Query: 255  I 255
            +
Sbjct: 2787 L 2787



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 87/243 (35%), Positives = 102/243 (41%), Gaps = 94/243 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVK---------GERGEKGAPGVVGP---PGPQGIPGDEGK 159
            PG  GP G+ GE+G KG+ G           GERG +GAPG  GP    G QG PG+EG+
Sbjct: 1622 PGPVGPRGRDGEVGEKGDDGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEEGR 1681

Query: 160  RG------PKGDMGYP----------------GPQGIPGDEGK----------------- 180
             G      PKGD G P                G +G PGD G+                 
Sbjct: 1682 NGSPGPSGPKGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASG 1741

Query: 181  -------------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---DG 218
                               RGP G+ G  G  GLDGR GL G+PG  G PG NG     G
Sbjct: 1742 ERGVSGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGASGPPGPNGAMGKAG 1801

Query: 219  IPGKDGLPG---------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             PG+DGLPG                     +DG PG NG NGE G  G  G +G+ G +G
Sbjct: 1802 DPGRDGLPGLRGEQGPPGPAGPPGAPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSG 1861

Query: 258  VPG 260
             PG
Sbjct: 1862 APG 1864



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 79/227 (34%), Positives = 94/227 (41%), Gaps = 81/227 (35%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPG--------PQGIPGDEGKR 160
            PG  G  G+KG+ GA   +G  G KGERG  G+PG+ GPPG         QG PG  G  
Sbjct: 1848 PGEDGRKGEKGDSGAPGREGRDGPKGERGAPGSPGLQGPPGLPGQVGPPGQGFPGVPGSS 1907

Query: 161  GPKGDMGYPGP---QGIPGDEG-------------------------------------- 179
            GPKGD G  GP   QG+PG+ G                                      
Sbjct: 1908 GPKGDRGETGPRGEQGLPGERGLRGEPGSLVNAERLLENIGIKTSALREIVETWEESSGG 1967

Query: 180  -------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------------GIPGR 213
                   +RGPKGD G  G  G +G  G  GE G                     G+PG 
Sbjct: 1968 FLPTPERRRGPKGDPGERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPGP 2027

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G PGK G+P   G+PG  G+ GE G  G RG RG+ G  G  G
Sbjct: 2028 TGLAGEPGKPGIP---GLPGPAGSVGEAGRPGERGERGEKGERGEQG 2071



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 95/247 (38%), Gaps = 88/247 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------------------- 143
            PGL GP G  GE G  GE G +GE+GE+G  G                            
Sbjct: 2040 PGLPGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVDEPGSGLS 2099

Query: 144  -VVGPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
               GPPG    +G PG +G RGPKGD G PG +G  G+ G+RGP G  G PG  G+ G +
Sbjct: 2100 REQGPPGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGPNGSPGLPGERGVAGPE 2159

Query: 200  GLPGEPGLDGIP------------------------GRNGMDGIPGKD------------ 223
            G PG  G  G P                        G +G+ G PG+             
Sbjct: 2160 GKPGLQGPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTG 2219

Query: 224  --------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                                GLPG+ G  G  G  G  G TG  G+RG  G+ G PG P 
Sbjct: 2220 AVGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPG 2279

Query: 264  ICAYKRE 270
                K E
Sbjct: 2280 PVGPKGE 2286



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 67/176 (38%), Positives = 82/176 (46%), Gaps = 28/176 (15%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPGPQGIPGDE 157
            E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG  GIPG  
Sbjct: 1984 ERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPGPTGLAGEPGKPGIPGLP 2043

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKG----------DMGYPGRIGLDGRDGLPGEPGL 207
            G  G  G+ G PG +G  G++G+RG +G                ++ +D       EPG 
Sbjct: 2044 GPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVD-------EPG- 2095

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+    G  G  G  G PG DG  G  G  GE G+ G RG  G+ G NG PG P 
Sbjct: 2096 SGLSREQGPPGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGPNGSPGLPG 2151



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 78/244 (31%), Positives = 98/244 (40%), Gaps = 81/244 (33%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDE 157
            GF  +  +    G +GP G +GE G KG+ G  G+RG  G+PG+ G     GP+G PG +
Sbjct: 2106 GFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGPNGSPGLPGERGVAGPEGKPGLQ 2165

Query: 158  GKR---------------------------GPKGDMGYPG-------------------- 170
            G R                           GP G  G PG                    
Sbjct: 2166 GPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLPG 2225

Query: 171  ---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDG 218
                     PQG PG  G+ G  G  G PGR G  G+D   G PG PG  G+PG  G  G
Sbjct: 2226 PPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPGPVGPKG 2285

Query: 219  IPGKDGLPGK-----------DGIPGT--------NGTNGEKGMTGPRGNRGKSGINGVP 259
             PG  G PG+            G PG          G  G++G+ GPRG +G++G  G P
Sbjct: 2286 EPGPMGTPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP 2345

Query: 260  GTPA 263
            G P 
Sbjct: 2346 GDPG 2349



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 71/193 (36%), Positives = 82/193 (42%), Gaps = 52/193 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++GAP         G VGP   PGP G PG    
Sbjct: 2239 PGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPGPVGPKGEPGPMGTPGQAVV 2298

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG   + GD  G+ G KGD G PG  G  G  G  GEP   G PG +G 
Sbjct: 2299 GPPGAKGEKGAPG--ALAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP---GDPGEDGQ 2353

Query: 217  DGIPGKDGLPGKD--------------------------------GIPGTNGTNGEKGMT 244
             G PG  G  G                                  G PG  G  GE G  
Sbjct: 2354 KGAPGPKGYKGDPGVGVQGPPGPVGPPGLKGDSGPPGSPGPPGIVGFPGQTGPRGELGQP 2413

Query: 245  GPRGNRGKSGING 257
            GP G RG +G  G
Sbjct: 2414 GPSGERGLAGAPG 2426



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 70/175 (40%), Positives = 88/175 (50%), Gaps = 29/175 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRGPKG 164
            PG +GP G++G IG  GE G KG+RG+ G       A G  G PGP G+ G+ GK G  G
Sbjct: 1982 PGERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPGPTGLAGEPGKPGIPG 2041

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------------EPGLDG 209
                PGP G  G+ G+ G +G+ G  G  G  GRDGLPG               EPG  G
Sbjct: 2042 ---LPGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVDEPG-SG 2097

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            +    G  G  G  G PG DG  G  G  GE G+   +G+RG+ G  G  G+P +
Sbjct: 2098 LSREQGPPGFKGAKGDPGSDGDRGPKGDRGEPGI---KGDRGEPGQRGPNGSPGL 2149



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 74/228 (32%), Positives = 85/228 (37%), Gaps = 77/228 (33%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG----------------------- 149
            GL GP G+KGE G  GE G  GE G+KGAPG  G  G                       
Sbjct: 2328 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGYKGDPGVGVQGPPGPVGPPGLKGDSG 2387

Query: 150  ------PQGIPGDEGKRGPKGDMGYPGPQ------------------------------- 172
                  P GI G  G+ GP+G++G PGP                                
Sbjct: 2388 PPGSPGPPGIVGFPGQTGPRGELGQPGPSGERGLAGAPGREGAPGPLGPPGPPGSAGVPG 2447

Query: 173  -------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                         G+PG  G+RG  G  G  GR GL+G  GL G PG+ G  G  G  G 
Sbjct: 2448 APGLKGDKGDTGAGLPGARGERGEPGVRGEDGRPGLEGPRGLAGPPGIRGERGEKGDAGA 2507

Query: 220  PGKDGLPGKD----GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G      G PG  G  G+ G  GPRG  G  G  G  G P 
Sbjct: 2508 SGLKGDKGDSAVILGPPGPRGAKGDSGERGPRGIDGDKGPRGDSGEPG 2555



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 91/241 (37%), Gaps = 75/241 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------------GP 147
            PG  GP G +GE G +GE G+ GERG +G PG +                          
Sbjct: 1904 PGSSGPKGDRGETGPRGEQGLPGERGLRGEPGSLVNAERLLENIGIKTSALREIVETWEE 1963

Query: 148  PGPQGIPGDEGKRGPKGD---MGYPGPQGIPGDEGKRGPKGDMGYP----------GRIG 194
                 +P  E +RGPKGD    G PG +G  G  G+RGPKGD G P          G  G
Sbjct: 1964 SSGGFLPTPERRRGPKGDPGERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERG 2023

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE-------------- 240
            L G  GL GEPG  GIPG  G  G  G+ G PG+ G  G  G  GE              
Sbjct: 2024 LPGPTGLAGEPGKPGIPGLPGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPG 2083

Query: 241  ------------------------KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
                                    KG  G  G+ G  G  G  G P I   + E     P
Sbjct: 2084 PPGPKVAVDEPGSGLSREQGPPGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGP 2143

Query: 277  N 277
            N
Sbjct: 2144 N 2144



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 71/203 (34%), Positives = 84/203 (41%), Gaps = 63/203 (31%)

Query: 112  PGLQGPIG------------------QKGEIGAKGEMGVKGERGEK-------------- 139
            PGLQGP G                    G  G +G  G+KGE GE               
Sbjct: 2162 PGLQGPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAV 2221

Query: 140  ------------------GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
                              G PG VG  G  G PG +G  G  GD G PG  G PG  G  
Sbjct: 2222 GLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPGPV 2281

Query: 182  GPKGD---MGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGK 228
            GPKG+   MG PG+  +G  G  G  G PG     L G PG  G  G+P   G+ G  G+
Sbjct: 2282 GPKGEPGPMGTPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRGEKGEAGR 2341

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             G PG  G +G+KG  GP+G +G
Sbjct: 2342 AGEPGDPGEDGQKGAPGPKGYKG 2364



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 63/181 (34%), Positives = 78/181 (43%), Gaps = 24/181 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG------------------APGVVGPPGPQG- 152
            PG  GP G+ G+ G  GE G+ G  G +G                  APG+ G  G  G 
Sbjct: 2401 PGQTGPRGELGQPGPSGERGLAGAPGREGAPGPLGPPGPPGSAGVPGAPGLKGDKGDTGA 2460

Query: 153  -IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG----L 207
             +PG  G+RG  G  G  G  G+ G  G  GP G  G  G  G  G  GL G+ G    +
Sbjct: 2461 GLPGARGERGEPGVRGEDGRPGLEGPRGLAGPPGIRGERGEKGDAGASGLKGDKGDSAVI 2520

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             G PG  G  G  G+ G  G DG  G  G +GE G  G +G  G  G  G+ G   +   
Sbjct: 2521 LGPPGPRGAKGDSGERGPRGIDGDKGPRGDSGEPGEKGTKGEPGDKGSAGLLGARGLTGP 2580

Query: 268  K 268
            K
Sbjct: 2581 K 2581



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 81/241 (33%), Positives = 102/241 (42%), Gaps = 68/241 (28%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVK---------------------------GERGEKGAPG 143
            P  +  P GQKGE    G+MG+K                             +GE+G PG
Sbjct: 1243 PCSVHCPKGQKGE---PGQMGLKGQAGPPGPPGLPGRIGAPGPQGPPGSASAKGERGFPG 1299

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDG 197
              GPPG  G PG  G  GPKG  G+ GP+G PG+ G RGPKG+ G PG++      GL G
Sbjct: 1300 ADGPPGSPGRPGTPGAPGPKGSPGWAGPRGEPGERGPRGPKGEPGEPGQVIGGEGPGLPG 1359

Query: 198  RDGLPGEP--------------------------GLDGIPGRNGMDGIPGK-DGLP--GK 228
            + G PG P                           + G  G  G  G PG  DG    G+
Sbjct: 1360 QKGDPGPPVSSRAWWWGEPTGGPGPRGPPGFPGTAVKGEKGDRGEQGPPGPGDGTAALGE 1419

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGI--NGVPGTPAICAYKRESCSLLP-NSETSQLLI 285
             G+PG  G+ G +G  GP G +G+ G   +G PG P       E  S+ P  SE    L 
Sbjct: 1420 PGLPGLPGSPGPQGSVGPPGEKGEKGDCEDGAPGLPGQPGIPGERVSVGPRGSEPFSCLS 1479

Query: 286  P 286
            P
Sbjct: 1480 P 1480



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 74/209 (35%), Positives = 90/209 (43%), Gaps = 56/209 (26%)

Query: 112  PGLQGPIGQKGEIGAKGE-----MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PGL GP+G KGE G  G      +G  G +GEKGAPG     +VG PG +G  G  G RG
Sbjct: 2275 PGLPGPVGPKGEPGPMGTPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRG 2334

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPG--------------RIGLDGRDGLPGEPGL 207
             KG+ G  G  G PG++G++G  G  GY G                GL G  G PG PG 
Sbjct: 2335 EKGEAGRAGEPGDPGEDGQKGAPGPKGYKGDPGVGVQGPPGPVGPPGLKGDSGPPGSPGP 2394

Query: 208  DGIPGRNGMDGIPGKDGLPGKDG------------------------------IPGTNGT 237
             GI G  G  G  G+ G PG  G                               PG  G 
Sbjct: 2395 PGIVGFPGQTGPRGELGQPGPSGERGLAGAPGREGAPGPLGPPGPPGSAGVPGAPGLKGD 2454

Query: 238  NGEK--GMTGPRGNRGKSGINGVPGTPAI 264
             G+   G+ G RG RG+ G+ G  G P +
Sbjct: 2455 KGDTGAGLPGARGERGEPGVRGEDGRPGL 2483



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 59/158 (37%), Positives = 68/158 (43%), Gaps = 44/158 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
            GL G  G KGE G  G  G+ G RGE G PGV   PG  G PG EG  GPKGD G+   P
Sbjct: 2637 GLDGEKGDKGEAGPPGRPGLAGRRGELGEPGV---PGQAGAPGKEGLIGPKGDRGFDGQP 2693

Query: 170  GPQGIPGDEGKR------------------------------------GPKGDMGYPGR- 192
            GP+G  G++G+R                                    G KG+ G PG  
Sbjct: 2694 GPKGDQGEKGERGPPGVGGFPGPRGSDGSSGPPGPPGSIGPKGPEGLQGQKGERGPPGES 2753

Query: 193  -IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
             +G  G  G PGE G  G PG  G  G  G+  L   D
Sbjct: 2754 VVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALTEDD 2791



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 74/209 (35%), Positives = 80/209 (38%), Gaps = 66/209 (31%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---------------------GPPGPQGI 153
            QG  G  G  G KGE G  G  G +G PGV                      G PG  G 
Sbjct: 1481 QGDRGLTGAAGEKGERGSPGPVGPQGLPGVAGRPGPEGPEGPPGPTGRRGEKGEPGRPGD 1540

Query: 154  PG-------------DEGKRGPKGDMGYPGPQGIPGDE--GKRGPKGDMGYPGRIGLDGR 198
            P              D G  GPKG +G+ G QG PG    G  GPKGD G  G IGL GR
Sbjct: 1541 PAVGPGGAGAKGEKGDMGPPGPKGAIGFKGEQGSPGLALPGDPGPKGDPGGRGPIGLTGR 1600

Query: 199  ------------DGLPGEPGLDGIPGRNGMDGIPG---------------KDGLPGKDGI 231
                         G PG PG  G  G  G DG  G               K G  G  G 
Sbjct: 1601 AGPPGDSGPPGEKGDPGRPGSPGPVGPRGRDGEVGEKGDDGPPGDPGLPGKAGERGLRGA 1660

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG  G  GEK   G +G+ G+ G NG PG
Sbjct: 1661 PGARGPVGEK---GDQGDPGEEGRNGSPG 1686



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 60/142 (42%), Positives = 75/142 (52%), Gaps = 17/142 (11%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            ++G  G  G  G +GE+G+PG+   G PGP+   GD G RGP G  G  GP G  G  G+
Sbjct: 1556 DMGPPGPKGAIGFKGEQGSPGLALPGDPGPK---GDPGGRGPIGLTGRAGPPGDSGPPGE 1612

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------GRNGMDGIPGKDGLPGK--- 228
            +G  G  G PG +G  GRDG  GE G DG P         G  G+ G PG  G  G+   
Sbjct: 1613 KGDPGRPGSPGPVGPRGRDGEVGEKGDDGPPGDPGLPGKAGERGLRGAPGARGPVGEKGD 1672

Query: 229  DGIPGTNGTNGEKGMTGPRGNR 250
             G PG  G NG  G +GP+G+R
Sbjct: 1673 QGDPGEEGRNGSPGPSGPKGDR 1694



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 69/231 (29%), Positives = 83/231 (35%), Gaps = 66/231 (28%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP-----------GVVG 146
            A++G      E  PPG        GE G  G  G  G +G  G P           G  G
Sbjct: 1394 AVKGEKGDRGEQGPPGPGDGTAALGEPGLPGLPGSPGPQGSVGPPGEKGEKGDCEDGAPG 1453

Query: 147  PPGPQGIPGDE---GKRG--------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI-- 193
             PG  GIPG+    G RG        P+GD G  G  G  G+ G  GP G  G PG    
Sbjct: 1454 LPGQPGIPGERVSVGPRGSEPFSCLSPQGDRGLTGAAGEKGERGSPGPVGPQGLPGVAGR 1513

Query: 194  ----------------GLDGRDGLPGEPGLD-------------GIPGRNGMDGIPGKDG 224
                            G  G  G PG+P +              G PG  G  G  G+ G
Sbjct: 1514 PGPEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGAKGEKGDMGPPGPKGAIGFKGEQG 1573

Query: 225  LPGKDGIPGTNGTNGEKGMTGPRGNRGKS------------GINGVPGTPA 263
             PG   +PG  G  G+ G  GP G  G++            G  G PG+P 
Sbjct: 1574 SPGL-ALPGDPGPKGDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPG 1623



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 75/228 (32%), Positives = 93/228 (40%), Gaps = 78/228 (34%)

Query: 111  PPGLQGPIGQKGEIGAKG-----EMGVKGERG---------------------EKGAPGV 144
            PPG +G IG KGE G+ G     + G KG+ G                     EKG PG 
Sbjct: 1559 PPGPKGAIGFKGEQGSPGLALPGDPGPKGDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGR 1618

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             G PGP G  G +G+ G KGD G PG  G+PG  G+RG +G  G  G +G  G  G PGE
Sbjct: 1619 PGSPGPVGPRGRDGEVGEKGDDGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGE 1678

Query: 205  PGLDGIPGRNGMDGI-------------------PGKDGLP------------------- 226
             G +G PG +G  G                     G+ G P                   
Sbjct: 1679 EGRNGSPGPSGPKGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKGDPGPPG 1738

Query: 227  --GKDGIPG------------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G+ G+ G              G  GEKG  GP G  G+SG++G PG
Sbjct: 1739 ASGERGVSGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPG 1786



 Score = 48.9 bits (115), Expect = 0.012,   Method: Composition-based stats.
 Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 29/117 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG------------------------APGVVGP 147
            PG +G IG KG+ G  G+ G KG++GEKG                         PG +GP
Sbjct: 2675 PGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPPGVGGFPGPRGSDGSSGPPGPPGSIGP 2734

Query: 148  PGPQGIPGDEGKRGPKGD--MGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRD 199
             GP+G+ G +G+RGP G+  +G PG  G PG+   +G+ GP G  G  G   L   D
Sbjct: 2735 KGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALTEDD 2791


>gi|344276273|ref|XP_003409933.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(VII) chain-like
            [Loxodonta africana]
          Length = 2916

 Score =  123 bits (308), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 72/170 (42%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKG-APGVVGPPGPQGIPGDEGKRGP------- 162
            P GL GP G +GE G KG+ G  G +G+KG +  +VGPPGP+G  GD G+RGP       
Sbjct: 2431 PRGLMGPPGSRGERGEKGDTGTAGLKGDKGDSAMIVGPPGPRGAKGDTGERGPQGIDGDK 2490

Query: 163  --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
              +GD G PG +GI G+ G +G  G +G  G  G  G  G+ G PG  G PG++G  G+ 
Sbjct: 2491 GPRGDSGIPGEKGIKGEPGDKGSAGSLGARGLTGPKGEPGVAGIPGDLGPPGKDGAPGVQ 2550

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G  G  G  G  G  G  G KG  G  G +G  G  G PG P +   K E
Sbjct: 2551 GDKGDAGFIGPRGLKGERGVKGACGQDGEKGDKGETGSPGRPGLAGRKGE 2600



 Score =  116 bits (290), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 65/146 (44%), Positives = 86/146 (58%), Gaps = 6/146 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
            PG +G  G+ G+ G+ G +G +G  G KG PGV G PG  G PG +G    +G KGD G+
Sbjct: 2499 PGEKGIKGEPGDKGSAGSLGARGLTGPKGEPGVAGIPGDLGPPGKDGAPGVQGDKGDAGF 2558

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             GP+G+   +G+RG KG  G  G  G  G  G PG PGL G  G  G  G+PG+ G PGK
Sbjct: 2559 IGPRGL---KGERGVKGACGQDGEKGDKGETGSPGRPGLAGRKGEMGEPGMPGQSGTPGK 2615

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSG 254
            +G+ G  G  G  G  GP+G++G+ G
Sbjct: 2616 EGLIGPKGDRGFDGQPGPKGDQGEKG 2641



 Score =  102 bits (253), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 95/212 (44%), Gaps = 67/212 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------------------- 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP G                       
Sbjct: 1601 GLRGTPGARGPVGEKGDQGDPGEDGRNGSPGPSGPKGDRGEPGPPGPPGRLVDTGLGARE 1660

Query: 151  QGIPGDEGKRGP------------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            +G PGD G+ GP                  +G  G PGPQG   D G RGP G+ G  G 
Sbjct: 1661 KGEPGDHGQEGPRGPKGDPGPPGPPGERGIEGLRGLPGPQG---DTGVRGPAGEKGDRGP 1717

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------K 228
             GLDGR+GL G+PG  G PG  G  G    PG+DGLPG                     +
Sbjct: 1718 PGLDGRNGLDGKPGAAGPPGLQGTTGKAGDPGRDGLPGLRGEQGPPGPPGPPGALGKPGE 1777

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            DG PG NG NGE G  G  G +G+ G +G PG
Sbjct: 1778 DGKPGLNGKNGEAGDPGEDGRKGEKGDSGAPG 1809



 Score =  100 bits (248), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 70/190 (36%), Positives = 87/190 (45%), Gaps = 38/190 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEG---------- 158
            PG QG  G +G  G KG+ G   + G  G  G PG  GPPG QG  G  G          
Sbjct: 1697 PGPQGDTGVRGPAGEKGDRGPPGLDGRNGLDGKPGAAGPPGLQGTTGKAGDPGRDGLPGL 1756

Query: 159  --------------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                                + G  G  G  G  G PG++G++G KGD G PGR   DG 
Sbjct: 1757 RGEQGPPGPPGPPGALGKPGEDGKPGLNGKNGEAGDPGEDGRKGEKGDSGAPGR---DGY 1813

Query: 199  DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            DG  GE G  G PG  G  G+PG+ G  G+   G+PG  G  G++G TG +G +G  G  
Sbjct: 1814 DGPKGERGAPGSPGLQGPPGLPGQIGPSGQGFPGVPGNVGPKGDRGETGSKGEQGPPGER 1873

Query: 257  GVPGTPAICA 266
            G+ G P   A
Sbjct: 1874 GLRGEPGSIA 1883



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 68/187 (36%), Positives = 92/187 (49%), Gaps = 38/187 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG----------------ERGEKGAPGVVGPPGPQGIPG 155
            PG +GP+G++G IG  GE G+KG                ERG  G PG+ G PG  GIPG
Sbjct: 1927 PGERGPLGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGLPGPPGLAGEPGKPGIPG 1986

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKG------------------DMGYPGRIGLDG 197
              G+ G  G+ G PG +G  G++G+RG +G                   +  PG  GL  
Sbjct: 1987 LPGRAGSVGEAGRPGERGERGEKGERGEQGRDGPPGLPGPPGPPGPKVTVDEPGP-GLYE 2045

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            + G PG  G  G PG +G  G  G  GLP   G+ G  G +GE+G+ G +G  G+ G+ G
Sbjct: 2046 KQGPPGLKGAKGEPGNDGDRGPKGDRGLP---GVKGDRGESGERGLAGSQGLPGERGVAG 2102

Query: 258  VPGTPAI 264
              G P +
Sbjct: 2103 PEGKPGL 2109



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 72/191 (37%), Positives = 92/191 (48%), Gaps = 54/191 (28%)

Query: 112  PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEG----- 158
            PGLQGP G  G+IG  G+        +G KG+RGE G+ G  GPPG +G+ G+ G     
Sbjct: 1826 PGLQGPPGLPGQIGPSGQGFPGVPGNVGPKGDRGETGSKGEQGPPGERGLRGEPGSIANV 1885

Query: 159  ----------------------------------KRGPKGD------MGYPGPQGIPGDE 178
                                              +RGPKG+      +G  GP G PG+ 
Sbjct: 1886 ERSLEAVGIKMSALREIVDTWDESSGSFLPVPERRRGPKGEPGERGPLGKEGPIGFPGER 1945

Query: 179  GKRGPKGDMGYPGRIGLD-GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            G +G +GD G  G  GL  G  GLPG PGL G PG+ G+ G+PG+ G  G+ G PG  G 
Sbjct: 1946 GLKGDRGDPGPQGPPGLALGERGLPGPPGLAGEPGKPGIPGLPGRAGSVGEAGRPGERGE 2005

Query: 238  NGEKGMTGPRG 248
             GEKG  G +G
Sbjct: 2006 RGEKGERGEQG 2016



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 75/229 (32%), Positives = 91/229 (39%), Gaps = 90/229 (39%)

Query: 122  GEIGAKGEM--------------------------------------------------G 131
            G+ G +GEM                                                  G
Sbjct: 2347 GQTGPRGEMGQPGPSGERGLAGLPGREGAPGPLGPPGPPGSVGASGAPGLKGDKGDPGAG 2406

Query: 132  VKGERGEKGAPGV---------VGPPGPQGIPGDEGKRGPKGD----------------M 166
            + G RGE+G PGV          GP G  G PG  G+RG KGD                +
Sbjct: 2407 LPGARGERGEPGVRGEDGRPGQEGPRGLMGPPGSRGERGEKGDTGTAGLKGDKGDSAMIV 2466

Query: 167  GYPGPQGIPGDEGKRGPK---GDMGYPGRIGLDGRDGLPGEP------------GLDGIP 211
            G PGP+G  GD G+RGP+   GD G  G  G+ G  G+ GEP            GL G  
Sbjct: 2467 GPPGPRGAKGDTGERGPQGIDGDKGPRGDSGIPGEKGIKGEPGDKGSAGSLGARGLTGPK 2526

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ GIPG  G PGKDG PG  G  G+ G  GPRG +G+ G+ G  G
Sbjct: 2527 GEPGVAGIPGDLGPPGKDGAPGVQGDKGDAGFIGPRGLKGERGVKGACG 2575



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 78/205 (38%), Positives = 90/205 (43%), Gaps = 64/205 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG--------------IPGDE- 157
            GL GP G+KG+ G  GE G  GE G+KGAPG+ G  G  G              I GD  
Sbjct: 2273 GLPGPRGEKGDAGRAGEPGDPGEDGQKGAPGLKGQKGDPGVGIQGPPGPAGLPGIKGDLG 2332

Query: 158  --------------GKRGPKGDMGYPGPQ------GIPGDE------------------G 179
                          G+ GP+G+MG PGP       G+PG E                  G
Sbjct: 2333 LPGPPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGLPGREGAPGPLGPPGPPGSVGASG 2392

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
              G KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG+ G  G
Sbjct: 2393 APGLKGDKGDPGA-------GLPGARGERGEPGVRGEDGRPGQEGPRGLMGPPGSRGERG 2445

Query: 240  EKGMTGPRGNRGKSG----INGVPG 260
            EKG TG  G +G  G    I G PG
Sbjct: 2446 EKGDTGTAGLKGDKGDSAMIVGPPG 2470



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 65/159 (40%), Positives = 81/159 (50%), Gaps = 28/159 (17%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERG---------------EKGAPGVVGPPGPQGIPG 155
            PPGLQG  G+ G+ G  G  G++GE+G               E G PG+ G  G  G PG
Sbjct: 1735 PPGLQGTTGKAGDPGRDGLPGLRGEQGPPGPPGPPGALGKPGEDGKPGLNGKNGEAGDPG 1794

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            ++G++G KGD       G PG +G  GPKG+ G PG  GL G  GLPG+ G  G      
Sbjct: 1795 EDGRKGEKGD------SGAPGRDGYDGPKGERGAPGSPGLQGPPGLPGQIGPSG------ 1842

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              G PG  G  G  G  G  G+ GE+G  G RG RG+ G
Sbjct: 1843 -QGFPGVPGNVGPKGDRGETGSKGEQGPPGERGLRGEPG 1880



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 76/217 (35%), Positives = 91/217 (41%), Gaps = 66/217 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER---------------------------------GE 138
            PG  GP G +G  G  GE G KGER                                 GE
Sbjct: 1416 PGDAGPKGDRGLPGNVGEPGEKGERGPPGPAGPQGLPGVAGRPGLEGPEGPPGPTGRRGE 1475

Query: 139  KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-----------KGDM 187
            KG PG  G P   G  G  G +G KG++G  GP+G PG +G+RGP           KGD 
Sbjct: 1476 KGEPGPPGDPAVVGTIG-AGAKGEKGEVGLTGPRGAPGVKGERGPPGLVLPGDPGPKGDP 1534

Query: 188  GYPGRIGLDGR---------------------DGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G  G IGL GR                      G  G  G DG  G  G +G+PG  GLP
Sbjct: 1535 GERGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGLPGDPGLP 1594

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            GK G  G  GT G +G  G +G++G  G +G  G+P 
Sbjct: 1595 GKAGERGLRGTPGARGPVGEKGDQGDPGEDGRNGSPG 1631



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 72/238 (30%), Positives = 91/238 (38%), Gaps = 93/238 (39%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD----------------- 156
            G  G+KGE+G  G  G  G +GE+G PG+V  G PGP+G PG+                 
Sbjct: 1494 GAKGEKGEVGLTGPRGAPGVKGERGPPGLVLPGDPGPKGDPGERGPIGLTGRAGPPGDSG 1553

Query: 157  ----------------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
                                  +G+ G KGD G PG  G+PG  G+RG +G  G  G +G
Sbjct: 1554 PPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGLPGDPGLPGKAGERGLRGTPGARGPVG 1613

Query: 195  LDGRDGLPGEPGLDGIPGRNG-------------------------MDGIPGKD------ 223
              G  G PGE G +G PG +G                           G PG        
Sbjct: 1614 EKGDQGDPGEDGRNGSPGPSGPKGDRGEPGPPGPPGRLVDTGLGAREKGEPGDHGQEGPR 1673

Query: 224  ---------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                                 GLPG  G  G  G  GEKG  GP G  G++G++G PG
Sbjct: 1674 GPKGDPGPPGPPGERGIEGLRGLPGPQGDTGVRGPAGEKGDRGPPGLDGRNGLDGKPG 1731



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/181 (33%), Positives = 82/181 (45%), Gaps = 44/181 (24%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            +G  G+ G +G+ G  G  G  G +G PG +G+ G  G  G  GP G+ G  GK G  G 
Sbjct: 1691 EGLRGLPGPQGDTGVRGPAGEKGDRGPPGLDGRNGLDGKPGAAGPPGLQGTTGKAGDPGR 1750

Query: 187  MGYP------------------------GRIGLDGRDGLPGEPGLD---------GIPGR 213
             G P                        G+ GL+G++G  G+PG D         G PGR
Sbjct: 1751 DGLPGLRGEQGPPGPPGPPGALGKPGEDGKPGLNGKNGEAGDPGEDGRKGEKGDSGAPGR 1810

Query: 214  NGMD------GIPGKDGLPGKDGIPGTNGTNGE-----KGMTGPRGNRGKSGINGVPGTP 262
            +G D      G PG  GL G  G+PG  G +G+      G  GP+G+RG++G  G  G P
Sbjct: 1811 DGYDGPKGERGAPGSPGLQGPPGLPGQIGPSGQGFPGVPGNVGPKGDRGETGSKGEQGPP 1870

Query: 263  A 263
             
Sbjct: 1871 G 1871



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 77/192 (40%), Positives = 90/192 (46%), Gaps = 47/192 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV------------------------KGERGEKGAPG--VV 145
            PGL G +G+ G+ GA G  G                         KGE G  GAPG  VV
Sbjct: 2184 PGLPGQVGETGKPGAPGRDGASGKDGDRGAPGVPGPPGLPGLVGPKGESGPMGAPGQAVV 2243

Query: 146  GPPG-------PQGIPGD-EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            GPPG       P G+ GD  G+ G KGD G PGP+G  GD G+ G  GD G  G+ G  G
Sbjct: 2244 GPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGDAGRAGEPGDPGEDGQKGAPG 2303

Query: 198  RDGLPGEPGLDGIPGR---------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
              G  G+PG+ GI G           G  G+PG  G PG  G PG  G  GE G  GP G
Sbjct: 2304 LKGQKGDPGV-GIQGPPGPAGLPGIKGDLGLPGPPGAPGVVGFPGQTGPRGEMGQPGPSG 2362

Query: 249  NRGKSGINGVPG 260
             RG   + G+PG
Sbjct: 2363 ERG---LAGLPG 2371



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 67/176 (38%), Positives = 81/176 (46%), Gaps = 34/176 (19%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG+QG  G  G IG    KGE GVKG  G+ G  G  G  G  G PG  G++G  G+ G 
Sbjct: 2547 PGVQGDKGDAGFIGPRGLKGERGVKGACGQDGEKGDKGETGSPGRPGLAGRKGEMGEPGM 2606

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------------------ 204
            PG  G PG EG  GPKGD G+ G+ G  G  G  GE                        
Sbjct: 2607 PGQSGTPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPPGTGGFPGPKGSDGSSGPPGP 2666

Query: 205  ------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                   G +G+ G+ G  G PG + + G  G PG  G  GE+G  GP G RG+ G
Sbjct: 2667 PGSVGPKGPEGLQGQKGERGPPG-ESVVGAPGAPGAPGERGEQGRPGPAGPRGEKG 2721



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 68/138 (49%), Positives = 76/138 (55%), Gaps = 13/138 (9%)

Query: 133  KGERG--EKGAPGVVGPPGP------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            KGE+G  E GAPG+ GPPG       QG+PGD G   PKGD G PG  G PG++G+RGP 
Sbjct: 1387 KGEKGDSEDGAPGLTGPPGTPGQRGLQGLPGDAG---PKGDRGLPGNVGEPGEKGERGPP 1443

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI--PGTNGTNGEKG 242
            G  G  G  G+ GR GL G  G  G  GR G  G PG  G P   G    G  G  GE G
Sbjct: 1444 GPAGPQGLPGVAGRPGLEGPEGPPGPTGRRGEKGEPGPPGDPAVVGTIGAGAKGEKGEVG 1503

Query: 243  MTGPRGNRGKSGINGVPG 260
            +TGPRG  G  G  G PG
Sbjct: 1504 LTGPRGAPGVKGERGPPG 1521



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 73/222 (32%), Positives = 90/222 (40%), Gaps = 76/222 (34%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG-----------------------APGVV--- 145
            PG  G +G+ G  G +GE G KGERGE+G                        PG+    
Sbjct: 1988 PGRAGSVGEAGRPGERGERGEKGERGEQGRDGPPGLPGPPGPPGPKVTVDEPGPGLYEKQ 2047

Query: 146  GPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            GPPG    +G PG++G RGPKGD G PG +G  G+ G+RG  G  G PG  G+ G +G P
Sbjct: 2048 GPPGLKGAKGEPGNDGDRGPKGDRGLPGVKGDRGESGERGLAGSQGLPGERGVAGPEGKP 2107

Query: 203  GEPGLDGIP------------------------GRNGMDGIPGKD--------------- 223
            G  G  G P                        G +G+ G PG+                
Sbjct: 2108 GLQGERGAPGPTGGRGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGVPGPIGAVG 2167

Query: 224  --------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                    GL G  G PG  G  GE G  G  G  G SG +G
Sbjct: 2168 LPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGASGKDG 2209



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 70/246 (28%), Positives = 90/246 (36%), Gaps = 93/246 (37%)

Query: 111  PPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            PPGL+G  G+    G+ G KG+ G+ G +G++G  G  G  G QG+PG+ G  GP+G  G
Sbjct: 2049 PPGLKGAKGEPGNDGDRGPKGDRGLPGVKGDRGESGERGLAGSQGLPGERGVAGPEGKPG 2108

Query: 168  YPGPQGI------------------PGDEGKRGPKGDMGYPGRI---------------- 193
              G +G                    G  G +GP G  G PG                  
Sbjct: 2109 LQGERGAPGPTGGRGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGVPGPIGAVGL 2168

Query: 194  ----------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------------------- 223
                      G  G  GLPG+ G  G PG  G DG  GKD                    
Sbjct: 2169 PGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGASGKDGDRGAPGVPGPPGLPGLVGP 2228

Query: 224  ------------------GLPGKDGIP--------GTNGTNGEKGMTGPRGNRGKSGING 257
                              G  G+ G P        G  G  G++G+ GPRG +G +G  G
Sbjct: 2229 KGESGPMGAPGQAVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGDAGRAG 2288

Query: 258  VPGTPA 263
             PG P 
Sbjct: 2289 EPGDPG 2294



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 55/139 (39%), Positives = 72/139 (51%), Gaps = 16/139 (11%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            +G  G+ G+ GE G PG    PG  G  G +G RG  G  G PG  G+ G +G+ GP   
Sbjct: 2181 QGAPGLPGQVGETGKPGA---PGRDGASGKDGDRGAPGVPGPPGLPGLVGPKGESGP--- 2234

Query: 187  MGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGKDGIPGTNG 236
            MG PG+  +G  G  G  G PG     L G PG  G  G+P   G+ G  G+ G PG  G
Sbjct: 2235 MGAPGQAVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGDAGRAGEPGDPG 2294

Query: 237  TNGEKGMTGPRGNRGKSGI 255
             +G+KG  G +G +G  G+
Sbjct: 2295 EDGQKGAPGLKGQKGDPGV 2313



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 60/169 (35%), Positives = 70/169 (41%), Gaps = 50/169 (29%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDEGKRG 161
            P GL+G  G KG  G  GE G KGE G  G PG+ G          PG  G PG EG  G
Sbjct: 2561 PRGLKGERGVKGACGQDGEKGDKGETGSPGRPGLAGRKGEMGEPGMPGQSGTPGKEGLIG 2620

Query: 162  PKGDMGY---PGPQGIPGDEGKR------------------------------------G 182
            PKGD G+   PGP+G  G++G+R                                    G
Sbjct: 2621 PKGDRGFDGQPGPKGDQGEKGERGPPGTGGFPGPKGSDGSSGPPGPPGSVGPKGPEGLQG 2680

Query: 183  PKGDMGYPGR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
             KG+ G PG   +G  G  G PGE G  G PG  G  G  G+  L   D
Sbjct: 2681 QKGERGPPGESVVGAPGAPGAPGERGEQGRPGPAGPRGEKGEAALTEDD 2729



 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/58 (56%), Positives = 40/58 (68%)

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            +GE+G PG  GPPG  G PG  G  GPKG  G+PGP+G  G+ G RGPKG+ G PG+I
Sbjct: 1241 KGERGFPGADGPPGSPGRPGTPGNPGPKGSPGWPGPRGETGERGLRGPKGEPGEPGKI 1298


>gi|328790457|ref|XP_397461.3| PREDICTED: neurotrimin-like [Apis mellifera]
          Length = 431

 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 110/200 (55%), Gaps = 21/200 (10%)

Query: 283 LLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKD-S 341
           +++PP I+      +S+ +++REG NV LRC A G P PSI W+    + I L + ++  
Sbjct: 108 VVVPPDILD---YMTSTDMIIREGSNVTLRCAAKGSPTPSITWRREGGESIFLENGEEVK 164

Query: 342 AVASSTLNFTRINRINMGAYMCLADN-VP--------------PQILIRNRRVGVPIGRT 386
            V  S  N T+INR+ MGAY+C+A N +P              P I I+N+ VG   G+ 
Sbjct: 165 IVEGSIFNITKINRLQMGAYLCIASNGIPPTVSKRIMLTVQFSPMISIQNQLVGAQEGQR 224

Query: 387 ATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446
            TLEC  EAFP  + YW   +  +IE +G KY+ S      Y+  M+L I    +SD+ T
Sbjct: 225 MTLECNSEAFPQLINYWTKENNEIIE-NGDKYNQS-FTNNVYKVHMKLTILATEMSDYGT 282

Query: 447 YRCISKNEVDIAKGSLILFE 466
           Y+CISKN +    GS+ L+ 
Sbjct: 283 YKCISKNSLGETDGSIKLYH 302


>gi|410971474|ref|XP_003992194.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-4(VI) chain-like
            [Felis catus]
          Length = 2341

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/165 (47%), Positives = 90/165 (54%), Gaps = 14/165 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKGDM-- 166
            PG  GP G +G  G  G  G++GE GE+G PG +G   P GP+G  G  G  GPKG +  
Sbjct: 1557 PGNVGPQGSRGRRGMPGLEGMRGESGERGYPGELGYSGPQGPRGRQGQPGNSGPKGSLGA 1616

Query: 167  -GYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLD-----GIPGRNGMD 217
             G PGP G  G +GK GP   KGD+G  G  G  GR GL G+PGL      G PGR G  
Sbjct: 1617 KGIPGPPGTVGSKGKAGPTGMKGDLGDTGATGPRGRQGLRGQPGLTGPDGYGHPGRKGKK 1676

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            G PG  G PG  G  G  G  GEKG  G RG RG +G  G  GTP
Sbjct: 1677 GEPGFPGSPGAQGEDGDPGHRGEKGAKGVRGRRGNAGFPGFIGTP 1721



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 73/130 (56%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KGE+G +G  G     GPQG PG+ G +G +G  G PG +G+ G+ G+RG  G++GY 
Sbjct: 1534 GPKGEKGRRGHQGRSSFDGPQGEPGNVGPQGSRGRRGMPGLEGMRGESGERGYPGELGYS 1593

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G  GR G PG  G  G  G  G+ G PG  G  GK G  G  G  G+ G TGPRG +
Sbjct: 1594 GPQGPRGRQGQPGNSGPKGSLGAKGIPGPPGTVGSKGKAGPTGMKGDLGDTGATGPRGRQ 1653

Query: 251  GKSGINGVPG 260
            G  G  G+ G
Sbjct: 1654 GLRGQPGLTG 1663



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 88/202 (43%), Gaps = 52/202 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG--------------------- 149
            P G +G  G+KG+ G +G  G+ GE+G +GAPG  G  G                     
Sbjct: 1459 PKGARGFSGEKGDPGDQGADGLDGEQGNRGAPGSSGEKGNRGNRGLTGPPGPPGKRGEPG 1518

Query: 150  -------------PQGIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKR 181
                          QG  G++G+RG +G   + GPQG               +PG EG R
Sbjct: 1519 LRGDPGDPGADSFIQGPKGEKGRRGHQGRSSFDGPQGEPGNVGPQGSRGRRGMPGLEGMR 1578

Query: 182  GPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  G+ GYPG +G  G     G  G+PG  G  G  G  GIPG  G  G  G  G  G  
Sbjct: 1579 GESGERGYPGELGYSGPQGPRGRQGQPGNSGPKGSLGAKGIPGPPGTVGSKGKAGPTGMK 1638

Query: 239  GEKGMTGPRGNRGKSGINGVPG 260
            G+ G TG  G RG+ G+ G PG
Sbjct: 1639 GDLGDTGATGPRGRQGLRGQPG 1660



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 78/168 (46%), Gaps = 35/168 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGP---------PGPQGIPGDEGK 159
            PGL+G  G+ GE G  GE+G    +G RG +G PG  GP         PGP G  G +GK
Sbjct: 1572 PGLEGMRGESGERGYPGELGYSGPQGPRGRQGQPGNSGPKGSLGAKGIPGPPGTVGSKGK 1631

Query: 160  RGPKG------DMGYPGPQGI-----------------PGDEGKRGPKGDMGYPGRIGLD 196
             GP G      D G  GP+G                  PG +GK+G  G  G PG  G D
Sbjct: 1632 AGPTGMKGDLGDTGATGPRGRQGLRGQPGLTGPDGYGHPGRKGKKGEPGFPGSPGAQGED 1691

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  GE G  G+ GR G  G PG  G PG  G PG  G  G KG+ 
Sbjct: 1692 GDPGHRGEKGAKGVRGRRGNAGFPGFIGTPGDQGPPGPVGIKGAKGLV 1739



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 81/185 (43%), Gaps = 46/185 (24%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVV---------------GPPGPQGIPGDEGKRGPKGDM 166
            GE G +G  G  G +G+KGA G+                G PGPQG  G  G RGPKG  
Sbjct: 1404 GEDGHRGVGGNPGNKGKKGADGLPGHPGEEGGHGERGPQGLPGPQGEEGCPGMRGPKGAR 1463

Query: 167  GYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGL---------------------P 202
            G+ G +G PGD+G     G +G+ G PG  G  G  G                      P
Sbjct: 1464 GFSGEKGDPGDQGADGLDGEQGNRGAPGSSGEKGNRGNRGLTGPPGPPGKRGEPGLRGDP 1523

Query: 203  GEPGLD-------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G+PG D       G  GR G  G    DG  G+ G  G  G+ G +GM G  G RG+SG 
Sbjct: 1524 GDPGADSFIQGPKGEKGRRGHQGRSSFDGPQGEPGNVGPQGSRGRRGMPGLEGMRGESGE 1583

Query: 256  NGVPG 260
             G PG
Sbjct: 1584 RGYPG 1588



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 23/116 (19%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE--------------RGEKGAPGVVG 146
            G   S  +  P G++G +G  G  G +G  G++G+              +G+KG PG  G
Sbjct: 1624 GTVGSKGKAGPTGMKGDLGDTGATGPRGRQGLRGQPGLTGPDGYGHPGRKGKKGEPGFPG 1683

Query: 147  PPGPQGIPGDEGKRGPKG---------DMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
             PG QG  GD G RG KG         + G+PG  G PGD+G  GP G  G  G +
Sbjct: 1684 SPGAQGEDGDPGHRGEKGAKGVRGRRGNAGFPGFIGTPGDQGPPGPVGIKGAKGLV 1739


>gi|297671393|ref|XP_002813835.1| PREDICTED: collagen alpha-1(VII) chain [Pongo abelii]
          Length = 2889

 Score =  119 bits (298), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 75/173 (43%), Positives = 95/173 (54%), Gaps = 16/173 (9%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKG----- 164
            P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD G+RGP+G     
Sbjct: 2436 PRGLTGPPGSRGERGEKGDVGTAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDK 2495

Query: 165  ----DMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
                D G PG +G    PGD+G  G  G  G PG  G  G  G+PG+P   G PG++G+ 
Sbjct: 2496 GPRGDNGDPGDKGSKGEPGDKGSAGSPGLRGLPGPQGQPGAAGIPGDP---GSPGKDGVS 2552

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            GI G+ G  G  G  G  G  G KG  G  G +G  G  G PG P +  +K E
Sbjct: 2553 GIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGE 2605



 Score =  118 bits (296), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 71/163 (43%), Positives = 91/163 (55%), Gaps = 18/163 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGK------- 159
            G +GP G  G+ G KG  G  G++G  G+PG+ G PGPQG      IPGD G        
Sbjct: 2493 GDKGPRGDNGDPGDKGSKGEPGDKGSAGSPGLRGLPGPQGQPGAAGIPGDPGSPGKDGVS 2552

Query: 160  --RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
              RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G PG PGL G  G  G  
Sbjct: 2553 GIRGEKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEP 2609

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG+ G PGK+G+ G  G  G  G  G +G++G+ G  G PG
Sbjct: 2610 GVPGQLGAPGKEGLIGPKGDRGFDGQPGAKGDQGEKGERGTPG 2652



 Score =  103 bits (257), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 79/209 (37%), Positives = 97/209 (46%), Gaps = 61/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG+ G  GE G  G PG  GP                    PG   
Sbjct: 1603 GLRGAPGVRGPVGEKGDQGDPGEDGRNGIPGPSGPKGDRGEPGPPGPPGRLVDTGPGARE 1662

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGP---KGDMGYPG- 191
            +G PGD G+ GP+G  G PG  G PG+ G                RGP   KGD G PG 
Sbjct: 1663 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGL 1722

Query: 192  --RIGLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGL------------PGKDGI 231
              R GLDG+ G PG  G +G       PGR+G+ G+ G+ G             PG+DG 
Sbjct: 1723 DGRSGLDGKPGAPGPSGPNGAAGKAGDPGRDGLPGLRGEQGPPGPSGPPGLLGKPGEDGK 1782

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG NG NGE G  G  G +G+ G +G PG
Sbjct: 1783 PGLNGKNGEPGDPGEDGRKGEKGDSGAPG 1811



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 65/165 (39%), Positives = 84/165 (50%), Gaps = 21/165 (12%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
            P G  G  G  G+ G+ G+ GV G RGEKG  G +GP    G +G+ G  G  G KGD G
Sbjct: 2530 PQGQPGAAGIPGDPGSPGKDGVSGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKG 2589

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDG 224
              GP G PG  G +G  G+ G PG++G  G++GL    G+ G DG PG  G  G  G+ G
Sbjct: 2590 EAGPPGRPGLAGHKGEMGEPGVPGQLGAPGKEGLIGPKGDRGFDGQPGAKGDQGEKGERG 2649

Query: 225  LPGKDGIPGTNGTN---------------GEKGMTGPRGNRGKSG 254
             PG  G PG +G +               G +G+ G +G RG  G
Sbjct: 2650 TPGIGGFPGPSGNDGSAGPPGPPGNVGPRGPEGLQGQKGERGPPG 2694



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 68/147 (46%), Positives = 81/147 (55%), Gaps = 9/147 (6%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDM 166
            G+ G  G+KG++G  G  G+KGERG KGA G+       G  GP G PG  G +G  G+ 
Sbjct: 2550 GVSGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEP 2609

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKD 223
            G PG  G PG EG  GPKGD G+ G+ G  G  G  GE   PG+ G PG +G DG  G  
Sbjct: 2610 GVPGQLGAPGKEGLIGPKGDRGFDGQPGAKGDQGEKGERGTPGIGGFPGPSGNDGSAGPP 2669

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G PG  G  G  G  G+KG  GP G R
Sbjct: 2670 GPPGNVGPRGPEGLQGQKGERGPPGER 2696



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 62/131 (47%), Positives = 70/131 (53%), Gaps = 2/131 (1%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            KGE G   E G  G PG  G PG QG  G  G  GPKGD G+ GP G  G++G+RGP G 
Sbjct: 1430 KGEKG-DSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFSGPLGEAGEKGERGPPGP 1488

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  GP
Sbjct: 1489 AGSRGLPGVAGRPGAEGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDVGP 1547

Query: 247  RGNRGKSGING 257
             G RG +G+ G
Sbjct: 1548 AGPRGATGVQG 1558



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 85/206 (41%), Gaps = 56/206 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G  G  GAKGE G  G+RG KG  GV   PG +G  GD G RG  G+ G PG 
Sbjct: 2046 PGLSGEQGPPGLKGAKGEPGSDGDRGPKGDRGV---PGIKGDRGDPGPRGQDGNPGLPGE 2102

Query: 172  QGIPGDEGK---------------------------------RGPKGDMGYPGRIGLDGR 198
            +G+ G EGK                                 +GP G  G PG  G  GR
Sbjct: 2103 RGVAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGR 2162

Query: 199  DGLP--------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                    G PGL G  G  G  G PG+DG  GKDG  G+ G  
Sbjct: 2163 GLPGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVP 2222

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+ GP G +G+ G  G PG   +
Sbjct: 2223 GSPGLPGPVGPKGEPGPTGAPGQAVV 2248



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 76/247 (30%), Positives = 91/247 (36%), Gaps = 88/247 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G+ G  G +GE G KGERGE+G                           PG+ 
Sbjct: 1990 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2049

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG +G RGPKGD G PG +G  GD G RG  G+ G PG  G+ G +
Sbjct: 2050 GEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDRGDPGPRGQDGNPGLPGERGVAGPE 2109

Query: 200  G---------------------------------LPGEPGLDGIPGRNGMDGIP------ 220
            G                                   G  GL G PG  G  G        
Sbjct: 2110 GKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTG 2169

Query: 221  -----------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                             G  GLPG+ G  G  G  G  G +G  G+RG  G+ G PG P 
Sbjct: 2170 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPG 2229

Query: 264  ICAYKRE 270
                K E
Sbjct: 2230 PVGPKGE 2236



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 68/161 (42%), Positives = 82/161 (50%), Gaps = 17/161 (10%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDEGKRG 161
            P GL+G  G KG  G  GE G KGE G  G PG+ G          PG  G PG EG  G
Sbjct: 2566 PRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQLGAPGKEGLIG 2625

Query: 162  PKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            PKGD G+   PG +G  G++G+RG  G  G+PG  G DG  G PG PG  G  G  G+ G
Sbjct: 2626 PKGDRGFDGQPGAKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGNVGPRGPEGLQG 2685

Query: 219  IPGKDGLPGKDGIPGTNGT-----NGEKGMTGPRGNRGKSG 254
              G+ G PG+  +            GE+G  GP G RG+ G
Sbjct: 2686 QKGERGPPGERVVGAPGAPGAPGERGEQGRPGPAGPRGEKG 2726



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 69/206 (33%), Positives = 84/206 (40%), Gaps = 66/206 (32%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD--------------- 156
            PG +G  G  G  G KGE G  GE G+ G  G  G PGP+G  GD               
Sbjct: 2271 PGAKGDRGLPGLRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPP 2330

Query: 157  --------------------EGKRGPKGDMGYPGP---QGIPGDEGKR------------ 181
                                +G+ GP+G+MG PGP   +G+ G  G+             
Sbjct: 2331 GVKGDLGVPGPPGAPGVVGFQGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPGPP 2390

Query: 182  ---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                     G KGD G PG        GLPG  G  G PG  G DG PG++G  G  G P
Sbjct: 2391 GSVGPPGASGLKGDKGDPGA-------GLPGPRGERGEPGVRGEDGRPGQEGPRGLTGPP 2443

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGV 258
            G+ G  GEKG  G  G +G  G + V
Sbjct: 2444 GSRGERGEKGDVGTAGLKGDKGDSAV 2469



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 95/215 (44%), Gaps = 51/215 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG------------------ERGEKGAPGVVGPPGPQGIP 154
            G +GP G  G  GA GE G+ G                  E+G++G PG+ G  G  G P
Sbjct: 1673 GPRGPKGDPGLPGAPGERGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKP 1732

Query: 155  GDEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGDM---------GYPGRIGLDGRDGLP 202
            G  G  GP G  G    PG  G+PG  G++GP G           G  G+ GL+G++G P
Sbjct: 1733 GAPGPSGPNGAAGKAGDPGRDGLPGLRGEQGPPGPSGPPGLLGKPGEDGKPGLNGKNGEP 1792

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG--------------------TNGEKG 242
            G+PG DG  G  G  G PG++G  G  G  G  G                      G  G
Sbjct: 1793 GDPGEDGRKGEKGDSGAPGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPG 1852

Query: 243  MTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
             TGP+G+RG++G  G  G P     + E  S +PN
Sbjct: 1853 GTGPKGDRGETGYKGEQGLPGERGLRGEPGS-MPN 1886



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 70/193 (36%), Positives = 82/193 (42%), Gaps = 52/193 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++G+P         G VGP   PGP G PG    
Sbjct: 2189 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2248

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG  G+ GD  G+ G KGD G PG  G  G  G  GEP   G PG +G 
Sbjct: 2249 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGLRGEKGEAGRAGEP---GDPGEDGQ 2303

Query: 217  DGIPGKDGLPG--------------------------------KDGIPGTNGTNGEKGMT 244
             G PG  G  G                                  G  G  G  GE G  
Sbjct: 2304 KGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGVPGPPGAPGVVGFQGQTGPRGEMGQP 2363

Query: 245  GPRGNRGKSGING 257
            GP G RG +G  G
Sbjct: 2364 GPSGERGLAGPPG 2376



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/129 (41%), Positives = 67/129 (51%), Gaps = 13/129 (10%)

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGR 192
            +G  G PG VG  G  G PG +G  G  GD G    PG  G+PG  G +G  G  G PG+
Sbjct: 2186 QGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQ 2245

Query: 193  --IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKG 242
              +GL G  G  G PG     L G PG  G  G+P   G+ G  G+ G PG  G +G+KG
Sbjct: 2246 AVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGLRGEKGEAGRAGEPGDPGEDGQKG 2305

Query: 243  MTGPRGNRG 251
              GP+G +G
Sbjct: 2306 APGPKGFKG 2314



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/116 (41%), Positives = 61/116 (52%), Gaps = 21/116 (18%)

Query: 109  YCPPGLQGPIGQ---KGEIGAKGEMGV------------------KGERGEKGAPGVVGP 147
            YCP G +G  G+   +G++G  G+ G+                  KGERG  GA G  G 
Sbjct: 1236 YCPKGQKGEPGEMGLRGQVGPSGDPGLPGRTGAPGPQGPPGSAIAKGERGFPGADGRPGS 1295

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            PG  G PG  G  G KG  G PGP+G PG++G RGPKG+ G PG++      GLPG
Sbjct: 1296 PGRPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEQGAPGQVIGGEGPGLPG 1351



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 71/213 (33%), Positives = 88/213 (41%), Gaps = 62/213 (29%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------ 164
            P GL G +   GE GAKG+ G+ G RGEKG  G  G PG  G  G +G  GPKG      
Sbjct: 2260 PGGLAGDL--VGEPGAKGDRGLPGLRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPG 2317

Query: 165  -----------------DMGYP---------------GPQGIPGDEGKRGPKGDMGYPGR 192
                             D+G P               GP+G  G  G  G +G  G PGR
Sbjct: 2318 VGVPGSPGPPGPPGVKGDLGVPGPPGAPGVVGFQGQTGPRGEMGQPGPSGERGLAGPPGR 2377

Query: 193  ---------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                                  GL G  G PG  GL G  G  G  G+ G+DG PG++G 
Sbjct: 2378 EGVPGPLGPPGPPGSVGPPGASGLKGDKGDPG-AGLPGPRGERGEPGVRGEDGRPGQEGP 2436

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  G +G  G +G+ G +G+ G  G  A+
Sbjct: 2437 RGLTGPPGSRGERGEKGDVGTAGLKGDKGDSAV 2469



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 82/279 (29%), Positives = 94/279 (33%), Gaps = 126/279 (45%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGER---------------------------------G 137
            PPG  GP G +G  G  GE G KGER                                 G
Sbjct: 1458 PPGAIGPKGDRGFSGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAEGPEGPPGPTGRQG 1517

Query: 138  EKGAPG------VVGP--PGPQGIPGDEGKRGPKGDMGY--------------------- 168
            EKG PG      VVGP   GP+G  GD G  GP+G  G                      
Sbjct: 1518 EKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGDPGRPGPPGPVGPRGR 1577

Query: 169  ---------------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP----- 202
                                  G +G+ G  G RGP G+ G  G  G DGR+G+P     
Sbjct: 1578 DGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGIPGPSGP 1637

Query: 203  --------------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG--- 233
                                      GEPG  G  G  G  G PG  G PG+ GI G   
Sbjct: 1638 KGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIDGLRG 1697

Query: 234  ---------TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                       G  GEKG  GP G  G+SG++G PG P 
Sbjct: 1698 PPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAPG 1736



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 74/257 (28%), Positives = 97/257 (37%), Gaps = 96/257 (37%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G   S  E  P G  G IG KG+ G  G +G  GE+GE+G P   GP G +G+PG  
Sbjct: 1442 GLPGQPGSPGEQGPRGPPGAIGPKGDRGFSGPLGEAGEKGERGPP---GPAGSRGLPGVA 1498

Query: 158  G---------------KRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYP- 190
            G               ++G KG+ G P           GP+G  GD G  GP+G  G   
Sbjct: 1499 GRPGAEGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQG 1558

Query: 191  --------------------GRIGLDGRD---------------GLPGEPGLDGIPGRNG 215
                                G +G  G +               GL G PG+ G  G  G
Sbjct: 1559 ERGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKG 1618

Query: 216  MDGIPGKDGLPGKDGIPGTNGTN----------------------------GEKGMTGPR 247
              G PG+D   G++GIPG +G                              G++G  GPR
Sbjct: 1619 DQGDPGED---GRNGIPGPSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPR 1675

Query: 248  GNRGKSGINGVPGTPAI 264
            G +G  G+ G PG   I
Sbjct: 1676 GPKGDPGLPGAPGERGI 1692



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 50/117 (42%), Positives = 56/117 (47%), Gaps = 18/117 (15%)

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG------------LDGRDGLPGEPGLDG 209
            PKG  G PG  G+    G+ GP GD G PGR G              G  G PG  G  G
Sbjct: 1238 PKGQKGEPGEMGL---RGQVGPSGDPGLPGRTGAPGPQGPPGSAIAKGERGFPGADGRPG 1294

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG--INGV-PGTPA 263
             PGR G  G PG  GL G  G+PG  G  GE+G  GP+G +G  G  I G  PG P 
Sbjct: 1295 SPGRPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEQGAPGQVIGGEGPGLPG 1351



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 74/247 (29%), Positives = 87/247 (35%), Gaps = 99/247 (40%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------------------ 145
            GP G +GE G KGE G+ GERG +G PG +                              
Sbjct: 1855 GPKGDRGETGYKGEQGLPGERGLRGEPGSMPNVDRLLETAGIKASALREIVETWDESSGS 1914

Query: 146  ------------------GPPGPQGIPGDEGKRGPKGDMGYPGPQ--------------- 172
                              GPPG +G  G  G+RG KGD G PGPQ               
Sbjct: 1915 FLPVPERRRGPKGDSGERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 1974

Query: 173  ----------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------- 208
                      GIPG  G+ G  G+ G PG  G  G  G  GE G D              
Sbjct: 1975 PGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGP 2034

Query: 209  ------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                        G+ G  G  G+ G  G PG DG  G  G  G  G+ G RG+ G  G +
Sbjct: 2035 PGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDRGDPGPRGQD 2094

Query: 257  GVPGTPA 263
            G PG P 
Sbjct: 2095 GNPGLPG 2101



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 62/183 (33%), Positives = 73/183 (39%), Gaps = 45/183 (24%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGE-------------------------MGVKGERGEKGAP 142
            E  PPG +GPIG  GE G KG+                          G  G+ G  G P
Sbjct: 1931 ERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGLP 1990

Query: 143  GVVGPPGPQGIPGDEGKRGPKGDMGYPG-----------------PQGIPGDEGKRGPKG 185
            G  G  G  G PG+ G+RG KG+ G  G                    +  DE   G  G
Sbjct: 1991 GRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSG 2050

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            + G P   GL G  G PG  G  G  G  G+ GI G  G PG  G  G  G  GE+G+ G
Sbjct: 2051 EQGPP---GLKGAKGEPGSDGDRGPKGDRGVPGIKGDRGDPGPRGQDGNPGLPGERGVAG 2107

Query: 246  PRG 248
            P G
Sbjct: 2108 PEG 2110



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 53/127 (41%), Positives = 64/127 (50%), Gaps = 11/127 (8%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E CP  +  P GQKGE    GEMG++G+ G  G PG+ G  G  G  G  G    KG+ G
Sbjct: 1231 EPCP--VYCPKGQKGE---PGEMGLRGQVGPSGDPGLPGRTGAPGPQGPPGSAIAKGERG 1285

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK----- 222
            +PG  G PG  G+ G  G  G PG  G  G  G  G+PG  G  G  G  G PG+     
Sbjct: 1286 FPGADGRPGSPGRPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEQGAPGQVIGGE 1345

Query: 223  -DGLPGK 228
              GLPG+
Sbjct: 1346 GPGLPGR 1352



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 75/227 (33%), Positives = 92/227 (40%), Gaps = 81/227 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ-------------------- 151
            PG  G  G+KG+ GA G  G  G +GE+GAPG++GP GP                     
Sbjct: 1795 PGEDGRKGEKGDSGAPGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGT 1854

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------------------- 179
            G  GD G+ G KG+ G PG +G+ G+ G                                
Sbjct: 1855 GPKGDRGETGYKGEQGLPGERGLRGEPGSMPNVDRLLETAGIKASALREIVETWDESSGS 1914

Query: 180  -------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDG-------------------IPGR 213
                   +RGPKGD G  G  G +G  G PGE GL G                    PG 
Sbjct: 1915 FLPVPERRRGPKGDSGERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 1974

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G PGK G+P   G+PG  G  GE G  G RG RG+ G  G  G
Sbjct: 1975 PGLAGEPGKPGIP---GLPGRAGGVGEAGRPGERGERGEKGERGEQG 2018



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/158 (36%), Positives = 66/158 (41%), Gaps = 44/158 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
            GL G  G KGE G  G  G+ G +GE G PGV   PG  G PG EG  GPKGD G+   P
Sbjct: 2580 GLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGV---PGQLGAPGKEGLIGPKGDRGFDGQP 2636

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLD------------------------GRDGLPGEP 205
            G +G  G++G+RG  G  G+PG  G D                        G  G PGE 
Sbjct: 2637 GAKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGNVGPRGPEGLQGQKGERGPPGER 2696

Query: 206  --------------GLDGIPGRNGMDGIPGKDGLPGKD 229
                          G  G PG  G  G  G+  L   D
Sbjct: 2697 VVGAPGAPGAPGERGEQGRPGPAGPRGEKGEAALTEDD 2734



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 81/188 (43%), Gaps = 40/188 (21%)

Query: 111  PPGLQGPIGQKGE---IGAKGEMGVKGERGEKG----------------------APGVV 145
            P   +GP G  GE    G +G +G  GERG KG                       PG+ 
Sbjct: 1919 PERRRGPKGDSGERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLA 1978

Query: 146  GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG-------------DMGYPGR 192
            G PG  GIPG  G+ G  G+ G PG +G  G++G+RG +G                   +
Sbjct: 1979 GEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPK 2038

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            + +D  +  PG  G  G PG  G  G PG DG  G  G  G  G  G++G  GPRG  G 
Sbjct: 2039 VSVD--EPGPGLSGEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDRGDPGPRGQDGN 2096

Query: 253  SGINGVPG 260
             G+ G  G
Sbjct: 2097 PGLPGERG 2104



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 64/176 (36%), Positives = 71/176 (40%), Gaps = 48/176 (27%)

Query: 125  GAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPG----------- 170
            G  G+ G+ G+ GE G PG     G  G  G PG EG+ GPKG+ G PG           
Sbjct: 1778 GEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGRDGPKGERGAPGILGPQGPPGLP 1837

Query: 171  ------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                   QG PG  G  GPKGD    G  G  G  GLPGE GL G PG      +P  D 
Sbjct: 1838 GPVGPPGQGFPGVPGGTGPKGDR---GETGYKGEQGLPGERGLRGEPG-----SMPNVDR 1889

Query: 225  LPGKDGI--------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            L    GI                    P      G KG +G RG  GK G  G PG
Sbjct: 1890 LLETAGIKASALREIVETWDESSGSFLPVPERRRGPKGDSGERGPPGKEGPIGFPG 1945



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 72/274 (26%), Positives = 88/274 (32%), Gaps = 123/274 (44%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IPG 155
            PPGL G  G  G+ GA G  G  G  G+ G PG  G PG +G                PG
Sbjct: 1719 PPGLDGRSGLDGKPGAPGPSGPNGAAGKAGDPGRDGLPGLRGEQGPPGPSGPPGLLGKPG 1778

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL-------- 207
            ++GK G  G  G PG    PG++G++G KGD G PGR G DG  G  G PG+        
Sbjct: 1779 EDGKPGLNGKNGEPGD---PGEDGRKGEKGDSGAPGREGRDGPKGERGAPGILGPQGPPG 1835

Query: 208  ------------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGT------------ 237
                               G  G  G  G  G+ GLPG+ G+ G  G+            
Sbjct: 1836 LPGPVGPPGQGFPGVPGGTGPKGDRGETGYKGEQGLPGERGLRGEPGSMPNVDRLLETAG 1895

Query: 238  ---------------------------NGEKGMTGPRGNRGKSGINGVP----------- 259
                                        G KG +G RG  GK G  G P           
Sbjct: 1896 IKASALREIVETWDESSGSFLPVPERRRGPKGDSGERGPPGKEGPIGFPGERGLKGDRGD 1955

Query: 260  -----------------------------GTPAI 264
                                         G P +
Sbjct: 1956 PGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGL 1989



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 79/208 (37%), Gaps = 51/208 (24%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE-G 158
            +GF  +      PG  G  G  G  G KG  G+ G RG+ G  G  GP G QG PG   G
Sbjct: 1284 RGFPGADGRPGSPGRPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEQGAPGQVIG 1343

Query: 159  KRGPKGDMGYPGPQGIPGDEGK-----------------------RGPKGDMGYPGRIGL 195
              GP    G PG +G PG  G                        +G KGD G  G  G 
Sbjct: 1344 GEGP----GLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAVKGDKGDRGERGPPGP 1399

Query: 196  DGRDGLPGEPGL-----------------------DGIPGRNGMDGIPGKDGLPGKDGIP 232
                  PGEPGL                       D   G  G+ G PG  G  G  G P
Sbjct: 1400 GEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPP 1459

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G++G +GP G  G+ G  G PG
Sbjct: 1460 GAIGPKGDRGFSGPLGEAGEKGERGPPG 1487



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 45/111 (40%), Positives = 55/111 (49%), Gaps = 14/111 (12%)

Query: 159  KRGPKGDM-----GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            K+G KGD      G PG  G PG++G RGP G +G  G  G  G  G  GE G  G PG 
Sbjct: 1429 KKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFSGPLGEAGEKGERGPPGP 1488

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G+PG         + G  G  G +G  GP G +G+ G  G PG PA+
Sbjct: 1489 AGSRGLPG---------VAGRPGAEGPEGPPGPTGRQGEKGEPGRPGDPAV 1530


>gi|119585297|gb|EAW64893.1| collagen, type VII, alpha 1 (epidermolysis bullosa, dystrophic,
            dominant and recessive), isoform CRA_a [Homo sapiens]
          Length = 2944

 Score =  119 bits (297), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 74/151 (49%), Positives = 91/151 (60%), Gaps = 7/151 (4%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKGDMGYP 169
            P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD G+RGP+G  G  
Sbjct: 2491 PRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDK 2550

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP+G  GD G +G KG+   PG  G  G  GL G  G  G P   G  GIPG  G PGKD
Sbjct: 2551 GPRGDNGDPGDKGSKGE---PGDKGSAGLPGLRGLLGPQGQP---GAAGIPGDPGSPGKD 2604

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G  G+ G  GPRG +G+ G+ G  G
Sbjct: 2605 GVPGIRGEKGDVGFMGPRGLKGERGVKGACG 2635



 Score =  116 bits (291), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 72/171 (42%), Positives = 92/171 (53%), Gaps = 21/171 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------------PGVVGPPGPQG 152
            E  P GL G  G +G+ G  G+ G KGE G+KG+               PG  G PG  G
Sbjct: 2540 ERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPG 2599

Query: 153  IPGDEGK---RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             PG +G    RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G PG PGL G
Sbjct: 2600 SPGKDGVPGIRGEKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGPPGRPGLAG 2656

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G  G PG
Sbjct: 2657 HKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 2707



 Score =  106 bits (265), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 78/209 (37%), Positives = 94/209 (44%), Gaps = 61/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                    PG   
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGARE 1717

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGL 195
            +G PGD G+ GP+G  G PG  G PG+ G                RGP G+ G  G  GL
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------KDGI 231
            DGR GL G+PG  G  G NG  G    PG+DGLPG                     +DG 
Sbjct: 1778 DGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGK 1837

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG NG NGE G  G  G +G+ G +G  G
Sbjct: 1838 PGLNGKNGEPGDPGEDGRKGEKGDSGASG 1866



 Score =  102 bits (255), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 71/177 (40%), Positives = 88/177 (49%), Gaps = 35/177 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDM 166
            G+ G  G+KG++G  G  G+KGERG KGA G+       G  GP G PG  G +G  G+ 
Sbjct: 2605 GVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEP 2664

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMD------ 217
            G PG  G PG EG  GPKGD G+ G+ G  G  G  GE   PG+ G PG +G D      
Sbjct: 2665 GVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPP 2724

Query: 218  ---------------GIPGKDGLPGK-----DGIPGTNGTNGEKGMTGPRGNRGKSG 254
                           G  G+ G PG+      G+PG  G  GE+G  GP G RG+ G
Sbjct: 2725 GPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKG 2781



 Score =  101 bits (252), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 66/165 (40%), Positives = 79/165 (47%), Gaps = 20/165 (12%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P GL+G  G KG  G  GE G KGE G  G PG+ G  G  G PG  G+ G  G  G  G
Sbjct: 2621 PRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIG 2680

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------------------GIPG 212
            P+G  G +G+ GPKGD G  G  G  G  G PG  G D                  G+ G
Sbjct: 2681 PKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQG 2740

Query: 213  RNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            + G  G PG+   G PG  G PG  G  G  G  GPRG +G++ +
Sbjct: 2741 QKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAAL 2785



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 65/138 (47%), Positives = 74/138 (53%), Gaps = 2/138 (1%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            KGE G   E G  G PG  G PG QG  G  G  GPKGD G+PGP G  G++G+RGP G 
Sbjct: 1444 KGEKG-DSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGP 1502

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  GP
Sbjct: 1503 AGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDVGP 1561

Query: 247  RGNRGKSGINGVPGTPAI 264
             G RG +G+ G  G P +
Sbjct: 1562 AGPRGATGVQGERGPPGL 1579



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 75/190 (39%), Positives = 88/190 (46%), Gaps = 46/190 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++G+P         G VGP   PGP G PG    
Sbjct: 2244 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2303

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLD---GI 210
            G  G KG+ G PG  G+ GD  G+ G KGD G P   G  G  GR G PG+PG D   G 
Sbjct: 2304 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGA 2361

Query: 211  PGRNGMD-----------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            PG  G                         G+PG  G PG  G PG  G  GE G  GP 
Sbjct: 2362 PGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPS 2421

Query: 248  GNRGKSGING 257
            G RG +G  G
Sbjct: 2422 GERGLAGPPG 2431



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 72/206 (34%), Positives = 86/206 (41%), Gaps = 56/206 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G  G  GAKGE G  G++G KG  GV   PG +G  G+ G RG  G+ G PG 
Sbjct: 2101 PGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGV---PGIKGDRGEPGPRGQDGNPGLPGE 2157

Query: 172  QGIPGDEGK---------------------------------RGPKGDMGYPGRIGLDGR 198
            +G+ G EGK                                 +GP G  G PG  G  GR
Sbjct: 2158 RGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGR 2217

Query: 199  --------------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                 G  G PGL G  G  G  G PG+DG  GKDG  G+ G  
Sbjct: 2218 GLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVP 2277

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+ GP G +G+ G  G PG   +
Sbjct: 2278 GSPGLPGPVGPKGEPGPTGAPGQAVV 2303



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 72/199 (36%), Positives = 87/199 (43%), Gaps = 60/199 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------------------- 143
            GL GP G+KGE G  GE G  GE G+KGAPG                             
Sbjct: 2333 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLG 2392

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKR------------------- 181
            + G PG  G+ G  G+ GP+G+MG PGP   +G+ G  G+                    
Sbjct: 2393 LPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPG 2452

Query: 182  --GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
              G KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG+ G  G
Sbjct: 2453 ASGLKGDKGDPGV-------GLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERG 2505

Query: 240  EKGMTGPRGNRGKSGINGV 258
            EKG  G  G +G  G + V
Sbjct: 2506 EKGDVGSAGLKGDKGDSAV 2524



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 70/181 (38%), Positives = 83/181 (45%), Gaps = 36/181 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRGP--- 162
            G QGP G++G IG  GE G+KG+RG+ G       A G  GPPGP G+ G+ GK G    
Sbjct: 1985 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGL 2044

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGR--------------------------IGLD 196
             G  G  G  G PG+ G+RG KG+ G  GR                           GL 
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G PG  G  G PG NG  G  G  G+PG  G  G  G  G+ G  G  G RG +G  
Sbjct: 2105 GEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2164

Query: 257  G 257
            G
Sbjct: 2165 G 2165



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 91/215 (42%), Gaps = 66/215 (30%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------ 164
            P GL G +   GE GAKG+ G+ G RGEKG  G  G PG  G  G +G  GPKG      
Sbjct: 2315 PGGLAGDL--VGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPG 2372

Query: 165  -----------------DMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                             D+G PG  G PG     G+ GP+G+MG PG     G  GL G 
Sbjct: 2373 VGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGP---SGERGLAGP 2429

Query: 205  PGLD--------------------------------GIPGRNGMDGIP---GKDGLPGKD 229
            PG +                                G+PG  G  G P   G+DG PG++
Sbjct: 2430 PGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQE 2489

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G  G +G  G +G+ G +G+ G  G  A+
Sbjct: 2490 GPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAV 2524



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 75/227 (33%), Positives = 93/227 (40%), Gaps = 81/227 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ-------------------- 151
            PG  G  G+KG+ GA G  G  G +GE+GAPG++GP GP                     
Sbjct: 1850 PGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGT 1909

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------------------- 179
            G  GD G+ G KG+ G PG +G+ G+ G                                
Sbjct: 1910 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 1969

Query: 180  -------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------------GIPGR 213
                   +RGPKGD G  G  G +G  G PGE GL                    G PG 
Sbjct: 1970 FLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2029

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +G+ G PGK G+P   G+PG  G  GE G  G RG RG+ G  G  G
Sbjct: 2030 SGLAGEPGKPGIP---GLPGRAGGVGEAGRPGERGERGEKGERGEQG 2073



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 69/165 (41%), Positives = 77/165 (46%), Gaps = 11/165 (6%)

Query: 108  EYCPPG--LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            E  PPG  L GP G  G  G  G  G+ G +G  G PG VG  G  G PG +G  G  GD
Sbjct: 2211 ETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGD 2270

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIPGRNGMDGIPGKD 223
             G PG  G PG  G  GPKG+   PG  G  G+   GLPG  G  G PG    D +    
Sbjct: 2271 RGSPGVPGSPGLPGPVGPKGE---PGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLV---- 2323

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G PG  G  G  G  GEKG  G  G  G  G +G  G P    +K
Sbjct: 2324 GEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFK 2368



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 76/242 (31%), Positives = 94/242 (38%), Gaps = 93/242 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
            P + GP G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD             
Sbjct: 1547 PAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1606

Query: 157  --------------------------EGKRGPKGD---------MGYPGPQGIPGDEGKR 181
                                      +G+ G KGD          G  G +G+ G  G R
Sbjct: 1607 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666

Query: 182  GPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGLDGI 210
            GP G+ G  G  G DGR+G P                               GEPG  G 
Sbjct: 1667 GPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQ 1726

Query: 211  PGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGINGV 258
             G  G  G PG  G PG+ GI G              G  GEKG  GP G  G+SG++G 
Sbjct: 1727 EGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGK 1786

Query: 259  PG 260
            PG
Sbjct: 1787 PG 1788



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 88/215 (40%), Gaps = 65/215 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---------------------------------K 139
            G  GP GQ G  G  GE G+ G  G+                                 +
Sbjct: 2141 GEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQ 2200

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGPKGDMGYP 190
            G  G+ G PG  G PG  G  GP G +         G  GPQG PG  G+ G  G  G P
Sbjct: 2201 GPSGLKGEPGETGPPG-RGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAP 2259

Query: 191  GRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTN---------- 235
            GR G  G+D   G PG PG  G+PG  G  G PG  G PG+   G+PG            
Sbjct: 2260 GRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLA 2319

Query: 236  -------GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                   G  G++G+ GPRG +G++G  G PG P 
Sbjct: 2320 GDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2354



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 90/186 (48%), Gaps = 23/186 (12%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++GF         PG++GP G+KG+   +G  G+ G  G  G PG  GP GP G  G  
Sbjct: 1746 GIEGFRGPPGPQGDPGVRGPAGEKGD---RGPPGLDGRSGLDGKPGAAGPSGPNGAAGKA 1802

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR---N 214
            G  G  G  G  G QG+PG  G  G  G  G  G+ GL+G++G PG+PG DG  G    +
Sbjct: 1803 GDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDS 1862

Query: 215  GMDGIPGKDGLPGKDGIPG-----------------TNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G+DG  G+ G PG                   G  G  G TGP+G+RG++G  G
Sbjct: 1863 GASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKG 1922

Query: 258  VPGTPA 263
              G P 
Sbjct: 1923 EQGLPG 1928



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 73/238 (30%), Positives = 89/238 (37%), Gaps = 93/238 (39%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------------------ 145
            GP G +GE G+KGE G+ GERG +G PG V                              
Sbjct: 1910 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 1969

Query: 146  ------------------GPPGPQGIPGDEGKRGPKGDMGY----------------PGP 171
                              GPPG +G  G  G+RG KGD G                 PGP
Sbjct: 1970 FLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2029

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD-------------- 217
             G+ G+ GK G  G  G  G +G  GR G  GE G  G  G  G D              
Sbjct: 2030 SGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGP 2089

Query: 218  ------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                        G+ G+ G PG  G  G  G+NG++   GP+G+RG  GI G  G P 
Sbjct: 2090 PGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQ---GPKGDRGVPGIKGDRGEPG 2144



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 71/161 (44%), Gaps = 29/161 (18%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG  G  GP+G  G +
Sbjct: 2629 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2688

Query: 158  GKRGPKGDMGYPGPQGIPG---------------------------DEGKRGPKGDMGYP 190
            G+ GPKGD G  G +G PG                            EG +G KG+ G P
Sbjct: 2689 GQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPP 2748

Query: 191  GR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G   +G  G  G PGE G  G PG  G  G  G+  L   D
Sbjct: 2749 GERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAALTEDD 2789



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 59/119 (49%), Gaps = 27/119 (22%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1250 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGR 1306

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG+ G RGPKG+ G PG++      GLPG
Sbjct: 1307 PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPG 1365



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 71/238 (29%), Positives = 92/238 (38%), Gaps = 78/238 (32%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G   S  E  P G  G IG KG+ G  G +G  GE+GE+G P   GP G +G+PG  
Sbjct: 1456 GLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP---GPAGSRGLPGVA 1512

Query: 158  G---------------KRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYPG 191
            G               ++G KG+ G P           GP+G  GD G  GP+G  G  G
Sbjct: 1513 GRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQG 1572

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK----------------------------- 222
              G  G   LPG+PG  G PG  G  G+ G+                             
Sbjct: 1573 ERGPPGL-VLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRG 1631

Query: 223  -DG------------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             DG                    G+ G+ G  G  G  G  G +G+ G+ G NG PG+
Sbjct: 1632 RDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGS 1689



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 78/293 (26%), Positives = 92/293 (31%), Gaps = 137/293 (46%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPGPQGIPGDE 157
            E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG  GIPG  
Sbjct: 1986 EQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLP 2045

Query: 158  GKRGPKGDMGYPG----------------------------------------------- 170
            G+ G  G+ G PG                                               
Sbjct: 2046 GRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSG 2105

Query: 171  ---PQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
               P G+                GD G  G KGD G PG  G DG  GLPGE G+ G  G
Sbjct: 2106 EQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEG 2165

Query: 213  R------------------------------------NGMDGIPGKDGLPGKD------- 229
            +                                    +G+ G PG+ G PG+        
Sbjct: 2166 KPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGA 2225

Query: 230  -------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                               G+PG  G  G+ G  G  G  GK G  G PG P 
Sbjct: 2226 VGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPG 2278



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/127 (41%), Positives = 64/127 (50%), Gaps = 11/127 (8%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E CP  +  P GQKGE    GEMG++G+ G  G PG+ G  G  G  G  G    KG+ G
Sbjct: 1245 EPCP--VYCPKGQKGE---PGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERG 1299

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK----- 222
            +PG  G PG  G+ G  G  G PG  G  G  G  G+PG  G  G  G  G PG+     
Sbjct: 1300 FPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGE 1359

Query: 223  -DGLPGK 228
              GLPG+
Sbjct: 1360 GPGLPGR 1366



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/117 (42%), Positives = 55/117 (47%)

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            V  P G +G PG+ G RG  G  G PG  G  G  G +GP G     G  G  G DG PG
Sbjct: 1249 VYCPKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPG 1308

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG  G PG  G  G+ G  GLPG  G PG  G  G KG  G  G        G+PG
Sbjct: 1309 SPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPG 1365



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 67/191 (35%), Positives = 80/191 (41%), Gaps = 49/191 (25%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            G++G  GA G  G  G  G  G PG        G PGP+G PG+ G RGPKG+ G PG  
Sbjct: 1296 GERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQV 1355

Query: 172  -----QGIPGDEGK-----------------------------RGPKGDMGYPGRIGLDG 197
                  G+PG +G                              +G KGD G  G  G   
Sbjct: 1356 IGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGE 1415

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG--------IPGTNGTNGEKGMTGPRGN 249
                PGEPGL G+PG  G  G  G  G  G+ G        +PG  G+ GE+G  GP G 
Sbjct: 1416 GGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGA 1475

Query: 250  RGKSGINGVPG 260
             G  G  G PG
Sbjct: 1476 IGPKGDRGFPG 1486



 Score = 41.2 bits (95), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 47/95 (49%)

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            P P  +   +G++G  G+MG  G++G  G  GLPG  G  G  G  G     G+ G PG 
Sbjct: 1244 PEPCPVYCPKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGA 1303

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            DG PG+ G  G  G  G  G +G  G+ G  G P 
Sbjct: 1304 DGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPG 1338


>gi|119585300|gb|EAW64896.1| collagen, type VII, alpha 1 (epidermolysis bullosa, dystrophic,
            dominant and recessive), isoform CRA_d [Homo sapiens]
          Length = 2978

 Score =  119 bits (297), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 74/151 (49%), Positives = 91/151 (60%), Gaps = 7/151 (4%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKGDMGYP 169
            P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD G+RGP+G  G  
Sbjct: 2491 PRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDK 2550

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP+G  GD G +G KG+   PG  G  G  GL G  G  G P   G  GIPG  G PGKD
Sbjct: 2551 GPRGDNGDPGDKGSKGE---PGDKGSAGLPGLRGLLGPQGQP---GAAGIPGDPGSPGKD 2604

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G  G+ G  GPRG +G+ G+ G  G
Sbjct: 2605 GVPGIRGEKGDVGFMGPRGLKGERGVKGACG 2635



 Score =  116 bits (291), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 72/171 (42%), Positives = 92/171 (53%), Gaps = 21/171 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------------PGVVGPPGPQG 152
            E  P GL G  G +G+ G  G+ G KGE G+KG+               PG  G PG  G
Sbjct: 2540 ERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPG 2599

Query: 153  IPGDEGK---RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             PG +G    RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G PG PGL G
Sbjct: 2600 SPGKDGVPGIRGEKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGPPGRPGLAG 2656

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G  G PG
Sbjct: 2657 HKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 2707



 Score =  106 bits (265), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 78/209 (37%), Positives = 94/209 (44%), Gaps = 61/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                    PG   
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGARE 1717

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGL 195
            +G PGD G+ GP+G  G PG  G PG+ G                RGP G+ G  G  GL
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------KDGI 231
            DGR GL G+PG  G  G NG  G    PG+DGLPG                     +DG 
Sbjct: 1778 DGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGK 1837

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG NG NGE G  G  G +G+ G +G  G
Sbjct: 1838 PGLNGKNGEPGDPGEDGRKGEKGDSGASG 1866



 Score =  102 bits (255), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 71/177 (40%), Positives = 88/177 (49%), Gaps = 35/177 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDM 166
            G+ G  G+KG++G  G  G+KGERG KGA G+       G  GP G PG  G +G  G+ 
Sbjct: 2605 GVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEP 2664

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMD------ 217
            G PG  G PG EG  GPKGD G+ G+ G  G  G  GE   PG+ G PG +G D      
Sbjct: 2665 GVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPP 2724

Query: 218  ---------------GIPGKDGLPGK-----DGIPGTNGTNGEKGMTGPRGNRGKSG 254
                           G  G+ G PG+      G+PG  G  GE+G  GP G RG+ G
Sbjct: 2725 GPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKG 2781



 Score =  101 bits (252), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 66/165 (40%), Positives = 79/165 (47%), Gaps = 20/165 (12%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P GL+G  G KG  G  GE G KGE G  G PG+ G  G  G PG  G+ G  G  G  G
Sbjct: 2621 PRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIG 2680

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------------------GIPG 212
            P+G  G +G+ GPKGD G  G  G  G  G PG  G D                  G+ G
Sbjct: 2681 PKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQG 2740

Query: 213  RNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            + G  G PG+   G PG  G PG  G  G  G  GPRG +G++ +
Sbjct: 2741 QKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAAL 2785



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 65/138 (47%), Positives = 74/138 (53%), Gaps = 2/138 (1%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            KGE G   E G  G PG  G PG QG  G  G  GPKGD G+PGP G  G++G+RGP G 
Sbjct: 1444 KGEKG-DSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGP 1502

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  GP
Sbjct: 1503 AGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDVGP 1561

Query: 247  RGNRGKSGINGVPGTPAI 264
             G RG +G+ G  G P +
Sbjct: 1562 AGPRGATGVQGERGPPGL 1579



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 75/190 (39%), Positives = 88/190 (46%), Gaps = 46/190 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++G+P         G VGP   PGP G PG    
Sbjct: 2244 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2303

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLD---GI 210
            G  G KG+ G PG  G+ GD  G+ G KGD G P   G  G  GR G PG+PG D   G 
Sbjct: 2304 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGA 2361

Query: 211  PGRNGMD-----------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            PG  G                         G+PG  G PG  G PG  G  GE G  GP 
Sbjct: 2362 PGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPS 2421

Query: 248  GNRGKSGING 257
            G RG +G  G
Sbjct: 2422 GERGLAGPPG 2431



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 72/206 (34%), Positives = 86/206 (41%), Gaps = 56/206 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G  G  GAKGE G  G++G KG  GV   PG +G  G+ G RG  G+ G PG 
Sbjct: 2101 PGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGV---PGIKGDRGEPGPRGQDGNPGLPGE 2157

Query: 172  QGIPGDEGK---------------------------------RGPKGDMGYPGRIGLDGR 198
            +G+ G EGK                                 +GP G  G PG  G  GR
Sbjct: 2158 RGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGR 2217

Query: 199  --------------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                 G  G PGL G  G  G  G PG+DG  GKDG  G+ G  
Sbjct: 2218 GLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVP 2277

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+ GP G +G+ G  G PG   +
Sbjct: 2278 GSPGLPGPVGPKGEPGPTGAPGQAVV 2303



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 72/199 (36%), Positives = 87/199 (43%), Gaps = 60/199 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------------------- 143
            GL GP G+KGE G  GE G  GE G+KGAPG                             
Sbjct: 2333 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLG 2392

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKR------------------- 181
            + G PG  G+ G  G+ GP+G+MG PGP   +G+ G  G+                    
Sbjct: 2393 LPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPG 2452

Query: 182  --GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
              G KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG+ G  G
Sbjct: 2453 ASGLKGDKGDPGV-------GLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERG 2505

Query: 240  EKGMTGPRGNRGKSGINGV 258
            EKG  G  G +G  G + V
Sbjct: 2506 EKGDVGSAGLKGDKGDSAV 2524



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 70/181 (38%), Positives = 83/181 (45%), Gaps = 36/181 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRGP--- 162
            G QGP G++G IG  GE G+KG+RG+ G       A G  GPPGP G+ G+ GK G    
Sbjct: 1985 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGL 2044

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGR--------------------------IGLD 196
             G  G  G  G PG+ G+RG KG+ G  GR                           GL 
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G PG  G  G PG NG  G  G  G+PG  G  G  G  G+ G  G  G RG +G  
Sbjct: 2105 GEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2164

Query: 257  G 257
            G
Sbjct: 2165 G 2165



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 91/215 (42%), Gaps = 66/215 (30%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------ 164
            P GL G +   GE GAKG+ G+ G RGEKG  G  G PG  G  G +G  GPKG      
Sbjct: 2315 PGGLAGDL--VGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPG 2372

Query: 165  -----------------DMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                             D+G PG  G PG     G+ GP+G+MG PG     G  GL G 
Sbjct: 2373 VGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGP---SGERGLAGP 2429

Query: 205  PGLD--------------------------------GIPGRNGMDGIP---GKDGLPGKD 229
            PG +                                G+PG  G  G P   G+DG PG++
Sbjct: 2430 PGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQE 2489

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G  G +G  G +G+ G +G+ G  G  A+
Sbjct: 2490 GPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAV 2524



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 75/227 (33%), Positives = 93/227 (40%), Gaps = 81/227 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ-------------------- 151
            PG  G  G+KG+ GA G  G  G +GE+GAPG++GP GP                     
Sbjct: 1850 PGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGT 1909

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------------------- 179
            G  GD G+ G KG+ G PG +G+ G+ G                                
Sbjct: 1910 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 1969

Query: 180  -------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------------GIPGR 213
                   +RGPKGD G  G  G +G  G PGE GL                    G PG 
Sbjct: 1970 FLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2029

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +G+ G PGK G+P   G+PG  G  GE G  G RG RG+ G  G  G
Sbjct: 2030 SGLAGEPGKPGIP---GLPGRAGGVGEAGRPGERGERGEKGERGEQG 2073



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 69/165 (41%), Positives = 77/165 (46%), Gaps = 11/165 (6%)

Query: 108  EYCPPG--LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            E  PPG  L GP G  G  G  G  G+ G +G  G PG VG  G  G PG +G  G  GD
Sbjct: 2211 ETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGD 2270

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIPGRNGMDGIPGKD 223
             G PG  G PG  G  GPKG+   PG  G  G+   GLPG  G  G PG    D +    
Sbjct: 2271 RGSPGVPGSPGLPGPVGPKGE---PGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLV---- 2323

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G PG  G  G  G  GEKG  G  G  G  G +G  G P    +K
Sbjct: 2324 GEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFK 2368



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 76/242 (31%), Positives = 94/242 (38%), Gaps = 93/242 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
            P + GP G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD             
Sbjct: 1547 PAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1606

Query: 157  --------------------------EGKRGPKGD---------MGYPGPQGIPGDEGKR 181
                                      +G+ G KGD          G  G +G+ G  G R
Sbjct: 1607 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666

Query: 182  GPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGLDGI 210
            GP G+ G  G  G DGR+G P                               GEPG  G 
Sbjct: 1667 GPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQ 1726

Query: 211  PGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGINGV 258
             G  G  G PG  G PG+ GI G              G  GEKG  GP G  G+SG++G 
Sbjct: 1727 EGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGK 1786

Query: 259  PG 260
            PG
Sbjct: 1787 PG 1788



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 88/215 (40%), Gaps = 65/215 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---------------------------------K 139
            G  GP GQ G  G  GE G+ G  G+                                 +
Sbjct: 2141 GEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQ 2200

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGPKGDMGYP 190
            G  G+ G PG  G PG  G  GP G +         G  GPQG PG  G+ G  G  G P
Sbjct: 2201 GPSGLKGEPGETGPPG-RGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAP 2259

Query: 191  GRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTN---------- 235
            GR G  G+D   G PG PG  G+PG  G  G PG  G PG+   G+PG            
Sbjct: 2260 GRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLA 2319

Query: 236  -------GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                   G  G++G+ GPRG +G++G  G PG P 
Sbjct: 2320 GDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2354



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 90/186 (48%), Gaps = 23/186 (12%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++GF         PG++GP G+KG+   +G  G+ G  G  G PG  GP GP G  G  
Sbjct: 1746 GIEGFRGPPGPQGDPGVRGPAGEKGD---RGPPGLDGRSGLDGKPGAAGPSGPNGAAGKA 1802

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR---N 214
            G  G  G  G  G QG+PG  G  G  G  G  G+ GL+G++G PG+PG DG  G    +
Sbjct: 1803 GDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDS 1862

Query: 215  GMDGIPGKDGLPGKDGIPG-----------------TNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G+DG  G+ G PG                   G  G  G TGP+G+RG++G  G
Sbjct: 1863 GASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKG 1922

Query: 258  VPGTPA 263
              G P 
Sbjct: 1923 EQGLPG 1928



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 73/238 (30%), Positives = 89/238 (37%), Gaps = 93/238 (39%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------------------ 145
            GP G +GE G+KGE G+ GERG +G PG V                              
Sbjct: 1910 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 1969

Query: 146  ------------------GPPGPQGIPGDEGKRGPKGDMGY----------------PGP 171
                              GPPG +G  G  G+RG KGD G                 PGP
Sbjct: 1970 FLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2029

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD-------------- 217
             G+ G+ GK G  G  G  G +G  GR G  GE G  G  G  G D              
Sbjct: 2030 SGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGP 2089

Query: 218  ------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                        G+ G+ G PG  G  G  G+NG++   GP+G+RG  GI G  G P 
Sbjct: 2090 PGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQ---GPKGDRGVPGIKGDRGEPG 2144



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 71/161 (44%), Gaps = 29/161 (18%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG  G  GP+G  G +
Sbjct: 2629 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2688

Query: 158  GKRGPKGDMGYPGPQGIPG---------------------------DEGKRGPKGDMGYP 190
            G+ GPKGD G  G +G PG                            EG +G KG+ G P
Sbjct: 2689 GQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPP 2748

Query: 191  GR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G   +G  G  G PGE G  G PG  G  G  G+  L   D
Sbjct: 2749 GERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAALTEDD 2789



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 59/119 (49%), Gaps = 27/119 (22%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1250 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGR 1306

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG+ G RGPKG+ G PG++      GLPG
Sbjct: 1307 PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPG 1365



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 71/238 (29%), Positives = 92/238 (38%), Gaps = 78/238 (32%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G   S  E  P G  G IG KG+ G  G +G  GE+GE+G P   GP G +G+PG  
Sbjct: 1456 GLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP---GPAGSRGLPGVA 1512

Query: 158  G---------------KRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYPG 191
            G               ++G KG+ G P           GP+G  GD G  GP+G  G  G
Sbjct: 1513 GRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQG 1572

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK----------------------------- 222
              G  G   LPG+PG  G PG  G  G+ G+                             
Sbjct: 1573 ERGPPGL-VLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRG 1631

Query: 223  -DG------------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             DG                    G+ G+ G  G  G  G  G +G+ G+ G NG PG+
Sbjct: 1632 RDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGS 1689



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 78/293 (26%), Positives = 92/293 (31%), Gaps = 137/293 (46%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPGPQGIPGDE 157
            E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG  GIPG  
Sbjct: 1986 EQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLP 2045

Query: 158  GKRGPKGDMGYPG----------------------------------------------- 170
            G+ G  G+ G PG                                               
Sbjct: 2046 GRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSG 2105

Query: 171  ---PQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
               P G+                GD G  G KGD G PG  G DG  GLPGE G+ G  G
Sbjct: 2106 EQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEG 2165

Query: 213  R------------------------------------NGMDGIPGKDGLPGKD------- 229
            +                                    +G+ G PG+ G PG+        
Sbjct: 2166 KPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGA 2225

Query: 230  -------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                               G+PG  G  G+ G  G  G  GK G  G PG P 
Sbjct: 2226 VGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPG 2278



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/127 (41%), Positives = 64/127 (50%), Gaps = 11/127 (8%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E CP  +  P GQKGE    GEMG++G+ G  G PG+ G  G  G  G  G    KG+ G
Sbjct: 1245 EPCP--VYCPKGQKGE---PGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERG 1299

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK----- 222
            +PG  G PG  G+ G  G  G PG  G  G  G  G+PG  G  G  G  G PG+     
Sbjct: 1300 FPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGE 1359

Query: 223  -DGLPGK 228
              GLPG+
Sbjct: 1360 GPGLPGR 1366



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/117 (42%), Positives = 55/117 (47%)

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            V  P G +G PG+ G RG  G  G PG  G  G  G +GP G     G  G  G DG PG
Sbjct: 1249 VYCPKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPG 1308

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG  G PG  G  G+ G  GLPG  G PG  G  G KG  G  G        G+PG
Sbjct: 1309 SPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPG 1365



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 66/191 (34%), Positives = 79/191 (41%), Gaps = 49/191 (25%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            G++G  GA G  G  G  G  G PG        G PGP+G PG+ G RGPKG+ G PG  
Sbjct: 1296 GERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQV 1355

Query: 172  -----QGIPGDE-----------------------------GKRGPKGDMGYPGRIGLDG 197
                  G+PG +                               +G KGD G  G  G   
Sbjct: 1356 IGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGE 1415

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG--------IPGTNGTNGEKGMTGPRGN 249
                PGEPGL G+PG  G  G  G  G  G+ G        +PG  G+ GE+G  GP G 
Sbjct: 1416 GGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGA 1475

Query: 250  RGKSGINGVPG 260
             G  G  G PG
Sbjct: 1476 IGPKGDRGFPG 1486



 Score = 41.2 bits (95), Expect = 2.7,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 47/95 (49%)

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            P P  +   +G++G  G+MG  G++G  G  GLPG  G  G  G  G     G+ G PG 
Sbjct: 1244 PEPCPVYCPKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGA 1303

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            DG PG+ G  G  G  G  G +G  G+ G  G P 
Sbjct: 1304 DGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPG 1338


>gi|403268583|ref|XP_003926351.1| PREDICTED: collagen alpha-1(VII) chain [Saimiri boliviensis
            boliviensis]
          Length = 2939

 Score =  116 bits (291), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 73/165 (44%), Positives = 93/165 (56%), Gaps = 21/165 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQG------IPGDEG 158
            E  P GL G  G +G+ G  G+ G KGE G+KG   +PG+ G PGPQG      IPGD G
Sbjct: 2535 ERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGLAGSPGLRGLPGPQGQPGAVGIPGDPG 2594

Query: 159  K---------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
                      RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G PG PGL G
Sbjct: 2595 SPGKDGVPGIRGEKGDIGFMGPRGL---KGERGVKGACGLDGEKGNKGEAGPPGRPGLAG 2651

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G
Sbjct: 2652 HKGETGEPGVPGQLGSPGKEGLIGPKGDRGFDGQPGPKGDQGEKG 2696



 Score =  115 bits (289), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 73/171 (42%), Positives = 92/171 (53%), Gaps = 13/171 (7%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRG------PK 163
            P GL GP G +GE G KG+ G  G +G+KG   V+ GPPG +G  G+ G RG      P+
Sbjct: 2489 PRGLTGPPGSRGERGEKGDAGTAGLKGDKGDSAVILGPPGAKGDMGERGPRGLDGDKGPR 2548

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            GD G PG +   G +G+ G KG  G PG  GL G  G PG  G+ G PG  G DG+PG  
Sbjct: 2549 GDNGDPGDK---GSKGEPGDKGLAGSPGLRGLPGPQGQPGAVGIPGDPGSPGKDGVPGIR 2605

Query: 224  GLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGTPAICAYKRES 271
            G  G  G  G  G  GE+G+ G     G +G  G  G PG P +  +K E+
Sbjct: 2606 GEKGDIGFMGPRGLKGERGVKGACGLDGEKGNKGEAGPPGRPGLAGHKGET 2656



 Score =  100 bits (248), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 65/138 (47%), Positives = 75/138 (54%), Gaps = 2/138 (1%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            KGE G   E G  G PG  G PG QG+ G  G  GPKGD G+PGP G  G++G+RGP G 
Sbjct: 1442 KGEKG-DSEDGAPGLPGQPGSPGEQGLRGPPGTTGPKGDRGFPGPLGEAGEKGERGPPGP 1500

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  GP
Sbjct: 1501 AGSRGLPGVAGRPGAEGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDAGP 1559

Query: 247  RGNRGKSGINGVPGTPAI 264
             G RG +G+ G  G P +
Sbjct: 1560 AGPRGATGVQGERGPPGL 1577



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 84/243 (34%), Positives = 100/243 (41%), Gaps = 94/243 (38%)

Query: 112  PGLQGPIGQKGEIGAKGE---------MGVKGERGEKGAPGV---VGPPGPQGIPGDEGK 159
            PG  GP G+ GE+G KG+          G  GERG +GAPGV   VG  G QG PG++G+
Sbjct: 1622 PGPVGPRGRDGEVGEKGDEGPPGDPGLPGKPGERGLRGAPGVRGSVGEKGDQGDPGEDGR 1681

Query: 160  RGPKGDMGY--------------------PGP--QGIPGDEGK----------------- 180
             G  G  G                     PG   +G PGD G+                 
Sbjct: 1682 NGSPGPSGSKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGPPGPPG 1741

Query: 181  -------------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI-- 219
                               RGP G+ G  G  GLDGR GL G+PG  G PG NG  G   
Sbjct: 1742 ERGVDGLRGPPGPQGDPGVRGPAGEKGDRGSPGLDGRSGLDGKPGAPGSPGLNGATGKAG 1801

Query: 220  -PGKDGL---------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             PG+DGL                     PG+DG PG NG NGE G  G  G +G+ G +G
Sbjct: 1802 DPGRDGLPGLRGEQGPPGPSGPPGLLGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGESG 1861

Query: 258  VPG 260
             PG
Sbjct: 1862 APG 1864



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 87/211 (41%), Gaps = 76/211 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--------------- 157
            GL GP G+KGE G  GE G  GE G+KGA      PGP+G  GD                
Sbjct: 2331 GLPGPRGEKGEAGRAGEPGDPGEDGQKGA------PGPKGYKGDPGVGVPGSPGPPGPPG 2384

Query: 158  --------------------GKRGPKGDMGYPGP---QGIPGDEGKR------------- 181
                                G+ GP+G+MG PGP   +G+ G  G+              
Sbjct: 2385 VKGDPGPPGAPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPGPPG 2444

Query: 182  --------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                    G KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG
Sbjct: 2445 SVGPPGASGLKGDKGDPGA-------GLPGPRGERGEPGVRGEDGYPGQEGPRGLTGPPG 2497

Query: 234  TNGTNGEKGMTGPRGNRGKSG----INGVPG 260
            + G  GEKG  G  G +G  G    I G PG
Sbjct: 2498 SRGERGEKGDAGTAGLKGDKGDSAVILGPPG 2528



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 73/243 (30%), Positives = 92/243 (37%), Gaps = 100/243 (41%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G+ G  G +GE G KGERGE+G                           PGV 
Sbjct: 2043 PGQAGGVGEAGRPGERGERGEKGERGEQGRDGSPGLPGIPGPPGPPGPKVAVDGPGPGVS 2102

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG +G +GPKGD G PG +G  G+ G RG  G+ G PG  G+ G +
Sbjct: 2103 GEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGVKGDRGEPGLRGQDGNPGLPGERGVAGPE 2162

Query: 200  GLP---------------------------------GEPGLDGIPGR------------- 213
            G P                                 G  GL G PG              
Sbjct: 2163 GKPGLQGLRGPPGPEGGRGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTG 2222

Query: 214  ----------------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                             G  G+PG+ G  GK G PG +GT+G+       G+RG  G+ G
Sbjct: 2223 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGTSGKD------GDRGSPGVPG 2276

Query: 258  VPG 260
             PG
Sbjct: 2277 SPG 2279



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 78/217 (35%), Positives = 88/217 (40%), Gaps = 67/217 (30%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGER---------------------------------G 137
            PPG  GP G +G  G  GE G KGER                                 G
Sbjct: 1470 PPGTTGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAEGPEGPPGPTGRQG 1529

Query: 138  EKGAPG------VVGP--PGPQGIPGDEGKRGPKGDMGYPGPQGIPG--DEGKRGPKGDM 187
            EKG PG      VVGP   GP+G  GD G  GP+G  G  G +G PG    G  GPKGD 
Sbjct: 1530 EKGEPGRPGDPAVVGPAVAGPKGEKGDAGPAGPRGATGVQGERGPPGLVLPGDPGPKGDA 1589

Query: 188  GYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMDGIPGKDG----------- 224
            G  G  GL GR             G PG PG  G  G  G DG  G+ G           
Sbjct: 1590 GDRGPTGLTGRAGPPGDSGPPGEKGDPGRPGAPGPVGPRGRDGEVGEKGDEGPPGDPGLP 1649

Query: 225  -LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              PG+ G+ G  G  G  G  G +G+ G+ G NG PG
Sbjct: 1650 GKPGERGLRGAPGVRGSVGEKGDQGDPGEDGRNGSPG 1686



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 5/148 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMGYP 169
            P + GP G+KG+ G  G  G  G +GE+G PG+V  G PGP+   GD G RGP G  G  
Sbjct: 1545 PAVAGPKGEKGDAGPAGPRGATGVQGERGPPGLVLPGDPGPK---GDAGDRGPTGLTGRA 1601

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP G  G  G++G  G  G PG +G  GRDG  GE G +G PG  G+ G PG+ GL G  
Sbjct: 1602 GPPGDSGPPGEKGDPGRPGAPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKPGERGLRGAP 1661

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G+ G+ G  G++G  G  G  G  G +G
Sbjct: 1662 GVRGSVGEKGDQGDPGEDGRNGSPGPSG 1689



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 69/181 (38%), Positives = 85/181 (46%), Gaps = 35/181 (19%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------VGPPGPQGIPGDEGKRGPKG 164
            ++GP G+KG+ G+ G  G  G  G+ GAPG           G PG  G+PG  G++GP G
Sbjct: 1760 VRGPAGEKGDRGSPGLDGRSGLDGKPGAPGSPGLNGATGKAGDPGRDGLPGLRGEQGPPG 1819

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
              G PG  G PG++GK G  G  G PG  G DGR    GE G  G PGR G DG  G+ G
Sbjct: 1820 PSGPPGLLGKPGEDGKPGLNGKNGEPGDPGEDGRK---GEKGESGAPGREGRDGPKGERG 1876

Query: 225  LPG-----------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG                         G  G  G  GE G  G +G  G+ G+ G PG+
Sbjct: 1877 PPGILGPQGPPGLPGPVGPPGQGFPGIPGSTGPKGDRGETGSKGEQGLPGERGLRGEPGS 1936

Query: 262  P 262
            P
Sbjct: 1937 P 1937



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 71/249 (28%), Positives = 97/249 (38%), Gaps = 93/249 (37%)

Query: 108  EYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            E  PPGL+G  G+    G+ G KG+ GV G +G++G PG+ G  G  G+PG+ G  GP+G
Sbjct: 2104 EQGPPGLKGAKGEPGSDGDQGPKGDRGVPGVKGDRGEPGLRGQDGNPGLPGERGVAGPEG 2163

Query: 165  DMGY------------------------------PGPQGIPGDEGK-------------- 180
              G                                GP G+ G+ G+              
Sbjct: 2164 KPGLQGLRGPPGPEGGRGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGA 2223

Query: 181  ------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP-- 226
                         GP+G  G PG++G  G+ G PG  G  G  G  G  G+PG  GLP  
Sbjct: 2224 VGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGTSGKDGDRGSPGVPGSPGLPGP 2283

Query: 227  ------------------------GKDGIP--------GTNGTNGEKGMTGPRGNRGKSG 254
                                    G+ G P        G  G  G++G+ GPRG +G++G
Sbjct: 2284 VGPKGEPGPPGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAG 2343

Query: 255  INGVPGTPA 263
              G PG P 
Sbjct: 2344 RAGEPGDPG 2352



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 66/178 (37%), Positives = 82/178 (46%), Gaps = 37/178 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDM 166
            G+ G  G+KG+IG  G  G+KGERG KGA G+       G  GP G PG  G +G  G+ 
Sbjct: 2600 GVPGIRGEKGDIGFMGPRGLKGERGVKGACGLDGEKGNKGEAGPPGRPGLAGHKGETGEP 2659

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------- 204
            G PG  G PG EG  GPKGD G+ G+ G  G  G  GE                      
Sbjct: 2660 GVPGQLGSPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPPGIGGFPGPRGNDGSAGPP 2719

Query: 205  --------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                     G +G+ G+ G  G PG+  +      PG  G  GE+G  GP G RG+ G
Sbjct: 2720 GPPGNIGPRGPEGLQGQKGERGPPGERVVGAPGA-PGAPGERGEQGRPGPAGARGEKG 2776



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 86/180 (47%), Gaps = 29/180 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL+GP G +G+ G +G  G KG+RG  G  G  G  G  G PG  G  G  G  G PG  
Sbjct: 1747 GLRGPPGPQGDPGVRGPAGEKGDRGSPGLDGRSGLDGKPGAPGSPGLNGATGKAGDPGRD 1806

Query: 173  GIPGDEGKRGPKGDM---------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G+PG  G++GP G           G  G+ GL+G++G PG+PG DG  G  G  G PG++
Sbjct: 1807 GLPGLRGEQGPPGPSGPPGLLGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGESGAPGRE 1866

Query: 224  GLPGKDGIPGTNG--------------------TNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G  G  G                      G  G TGP+G+RG++G  G  G P 
Sbjct: 1867 GRDGPKGERGPPGILGPQGPPGLPGPVGPPGQGFPGIPGSTGPKGDRGETGSKGEQGLPG 1926



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 69/162 (42%), Positives = 81/162 (50%), Gaps = 11/162 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP G+ G+ G  GE G+ G  G +G PG +GPPGP G  G  G  G KGD G PG 
Sbjct: 2404 PGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPGPPGSVGPPGASGLKGDKGDPG- 2462

Query: 172  QGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG---- 224
             G+PG  G+RG    +G+ GYPG+ G  G  G PG  G  G  G  G  G+ G  G    
Sbjct: 2463 AGLPGPRGERGEPGVRGEDGYPGQEGPRGLTGPPGSRGERGEKGDAGTAGLKGDKGDSAV 2522

Query: 225  ---LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                PG  G  G  G  G  G  GPRG+ G  G  G  G P 
Sbjct: 2523 ILGPPGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPG 2564



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 79/202 (39%), Gaps = 64/202 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-----------------PQGIP 154
            PGL G +G+ G+ GA G  G  G+ G++G+PGV G PG                  Q + 
Sbjct: 2242 PGLPGQVGETGKPGAPGRDGTSGKDGDRGSPGVPGSPGLPGPVGPKGEPGPPGAPGQAVV 2301

Query: 155  GDEGKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G +G KG      P G+ GD  G+ G KGD G PG  G  G  G  GEPG    PG 
Sbjct: 2302 GLPGAKGEKG-----APGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPG---DPGE 2353

Query: 214  NGMDGIPGKDGLPG--------------------------------KDGIPGTNGTNGEK 241
            +G  G PG  G  G                                  G PG  G  GE 
Sbjct: 2354 DGQKGAPGPKGYKGDPGVGVPGSPGPPGPPGVKGDPGPPGAPGAPGVVGFPGQTGPRGEM 2413

Query: 242  GMTGPRGNRGKSGINGVPGTPA 263
            G  GP G RG      + G P 
Sbjct: 2414 GQPGPSGERG------LAGPPG 2429



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 75/244 (30%), Positives = 92/244 (37%), Gaps = 90/244 (36%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGE----------------------------------- 135
            P G +G  G KGE G  GE G++GE                                   
Sbjct: 1909 PKGDRGETGSKGEQGLPGERGLRGEPGSPQNVERLLETAGIKVSALREIVETWDESSGSF 1968

Query: 136  -------RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ---------------- 172
                   RG KG PG  GPPG +G  G  G+RG KGD G PGPQ                
Sbjct: 1969 LPVSERRRGPKGDPGERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPP 2028

Query: 173  ---------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------------- 210
                     GIPG  G+ G  G+ G PG  G  G  G  GE G DG              
Sbjct: 2029 GLAGEPGKPGIPGLPGQAGGVGEAGRPGERGERGEKGERGEQGRDGSPGLPGIPGPPGPP 2088

Query: 211  ----------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      PG +G  G PG  G  G+ G  G  G  G++G+ G +G+RG+ G+ G  G
Sbjct: 2089 GPKVAVDGPGPGVSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGVKGDRGEPGLRGQDG 2148

Query: 261  TPAI 264
             P +
Sbjct: 2149 NPGL 2152



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 60/186 (32%), Positives = 75/186 (40%), Gaps = 59/186 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER-------------------------------GEKG 140
            PG +GP G++G IG  GE G+KG+R                               G  G
Sbjct: 1982 PGERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPG 2041

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGY---------------------------PGPQG 173
             PG  G  G  G PG+ G+RG KG+ G                            PGP G
Sbjct: 2042 LPGQAGGVGEAGRPGERGERGEKGERGEQGRDGSPGLPGIPGPPGPPGPKVAVDGPGP-G 2100

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            + G++G  G KG  G PG  G  G  G  G PG+ G  G  G+ G  G  GLPG+ G+ G
Sbjct: 2101 VSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGVKGDRGEPGLRGQDGNPGLPGERGVAG 2160

Query: 234  TNGTNG 239
              G  G
Sbjct: 2161 PEGKPG 2166



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 85/179 (47%), Gaps = 28/179 (15%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMG----------VKGERGEKGAPGVVGPPGPQGIPGDE 157
            E  PPG +GPIG  GE G KG+ G            GERG  G PG+ G PG  GIPG  
Sbjct: 1984 ERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGLP 2043

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKG-------------DMGYPGRIGLDGRDGLPGE 204
            G+ G  G+ G PG +G  G++G+RG +G                   ++ +DG    PG 
Sbjct: 2044 GQAGGVGEAGRPGERGERGEKGERGEQGRDGSPGLPGIPGPPGPPGPKVAVDGPG--PGV 2101

Query: 205  PGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G PG  G  G PG D   G  G  G+PG  G  GE G+ G  GN G  G  GV G
Sbjct: 2102 SGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGVKGDRGEPGLRGQDGNPGLPGERGVAG 2160



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 72/239 (30%), Positives = 87/239 (36%), Gaps = 93/239 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------- 158
            PGL G   + GE G  GE G KGE+GE GAPG  G  GP+G  G  G             
Sbjct: 1836 PGLNG---KNGEPGDPGEDGRKGEKGESGAPGREGRDGPKGERGPPGILGPQGPPGLPGP 1892

Query: 159  -------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI-------GL--- 195
                           GPKGD G  G +G  G  G+RG +G+ G P  +       G+   
Sbjct: 1893 VGPPGQGFPGIPGSTGPKGDRGETGSKGEQGLPGERGLRGEPGSPQNVERLLETAGIKVS 1952

Query: 196  --------------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---------- 225
                                + R G  G+PG  G PG+ G  G PG+ GL          
Sbjct: 1953 ALREIVETWDESSGSFLPVSERRRGPKGDPGERGPPGKEGPIGFPGERGLKGDRGDPGPQ 2012

Query: 226  ------------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                                    PG  G+PG  G  GE G  G RG RG+ G  G  G
Sbjct: 2013 GPPGLALGERGPPGPPGLAGEPGKPGIPGLPGQAGGVGEAGRPGERGERGEKGERGEQG 2071



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 66/214 (30%), Positives = 81/214 (37%), Gaps = 71/214 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER---------------GEKGAPGVVGPPGPQGIPGD 156
            PGL G  G+ G+ G  G  G++GE+               GE G PG+    G  G PGD
Sbjct: 1791 PGLNGATGKAGDPGRDGLPGLRGEQGPPGPSGPPGLLGKPGEDGKPGL---NGKNGEPGD 1847

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI----------------------- 193
             G+ G KG+    G  G PG EG+ GPKG+ G PG +                       
Sbjct: 1848 PGEDGRKGE---KGESGAPGREGRDGPKGERGPPGILGPQGPPGLPGPVGPPGQGFPGIP 1904

Query: 194  ---GLDGRDGLPGEPGLDGIPGRNGMDGIPGK----DGLPGKDGI--------------- 231
               G  G  G  G  G  G+PG  G+ G PG     + L    GI               
Sbjct: 1905 GSTGPKGDRGETGSKGEQGLPGERGLRGEPGSPQNVERLLETAGIKVSALREIVETWDES 1964

Query: 232  -----PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                 P +    G KG  G RG  GK G  G PG
Sbjct: 1965 SGSFLPVSERRRGPKGDPGERGPPGKEGPIGFPG 1998



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 69/243 (28%), Positives = 91/243 (37%), Gaps = 90/243 (37%)

Query: 108  EYCPPGL--QGPIGQKGEIGAKGEMGVKG------------ERGEKGAPGVVGPPGPQGI 153
            E  PPGL   G  G KG+ G +G  G+ G            E+G+ G PG  GP GP+G 
Sbjct: 1571 ERGPPGLVLPGDPGPKGDAGDRGPTGLTGRAGPPGDSGPPGEKGDPGRPGAPGPVGPRGR 1630

Query: 154  PGDEGK---------------------RGP---KGDMGYPGPQGIPGDEGKRGPKGDMGY 189
             G+ G+                     RG    +G +G  G QG PG++G+ G  G  G 
Sbjct: 1631 DGEVGEKGDEGPPGDPGLPGKPGERGLRGAPGVRGSVGEKGDQGDPGEDGRNGSPGPSGS 1690

Query: 190  PGR---------------IGLDGRD-GLPGEPG---------------------LDGI-- 210
             G                 G   R+ G PG+ G                     +DG+  
Sbjct: 1691 KGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGPPGPPGERGVDGLRG 1750

Query: 211  -------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                          G  G  G PG DG  G DG PG  G+ G  G TG  G+ G+ G+ G
Sbjct: 1751 PPGPQGDPGVRGPAGEKGDRGSPGLDGRSGLDGKPGAPGSPGLNGATGKAGDPGRDGLPG 1810

Query: 258  VPG 260
            + G
Sbjct: 1811 LRG 1813



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 62/218 (28%), Positives = 76/218 (34%), Gaps = 86/218 (39%)

Query: 113  GLQGPIGQKG---------------------------EIGAKGEMGVKGERGEK------ 139
            G+ GP G+ G                             G +G  G+KGE GE       
Sbjct: 2157 GVAGPEGKPGLQGLRGPPGPEGGRGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRG 2216

Query: 140  --------------------------GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
                                      G PG VG  G  G PG +G  G  GD G PG  G
Sbjct: 2217 LPGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGTSGKDGDRGSPGVPG 2276

Query: 174  IPGDE--------------------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             PG                      G  G KG+ G PG +  D    L GEPG     G 
Sbjct: 2277 SPGLPGPVGPKGEPGPPGAPGQAVVGLPGAKGEKGAPGGLAGD----LVGEPGAK---GD 2329

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G+ G  G+ G  G+ G PG  G +G+KG  GP+G +G
Sbjct: 2330 RGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGYKG 2367



 Score = 52.8 bits (125), Expect = 0.001,   Method: Composition-based stats.
 Identities = 70/210 (33%), Positives = 84/210 (40%), Gaps = 69/210 (32%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
            G  G  G+ G  G  G  G  G  G KG+PG+   PGP+G PG++G RGPKG+       
Sbjct: 1297 GFPGADGRPGSPGRPGTHGTPGAPGLKGSPGL---PGPRGQPGEQGPRGPKGEPGPPGQV 1353

Query: 166  MGYPGPQGIPGDEGK-----------------------------RGPKGDMGYPGRIGLD 196
             G  GP G+PG +G                              +G KGD G  G  G  
Sbjct: 1354 TGGQGP-GLPGRKGDPGPSGPPGPLGPQGDPGPRGPPGLPGTAVKGDKGDRGERGPPGPG 1412

Query: 197  GRDGLPGEPGL--------------------------DGIPGRNGMDGIPGKDGLPGKDG 230
                 PGEPGL                          DG PG  G  G PG+ GL G   
Sbjct: 1413 EGGIAPGEPGLPGLPGNPGPQGPVGPPGEKGEKGDSEDGAPGLPGQPGSPGEQGLRGP-- 1470

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PGT G  G++G  GP G  G+ G  G PG
Sbjct: 1471 -PGTTGPKGDRGFPGPLGEAGEKGERGPPG 1499



 Score = 49.7 bits (117), Expect = 0.007,   Method: Composition-based stats.
 Identities = 47/119 (39%), Positives = 59/119 (49%), Gaps = 27/119 (22%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1248 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGSTGAPGPQGPPGSTIAKGERGFPGADGR 1304

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             G PG  G  G  G  G KG  G PGP+G PG++G RGPKG+ G PG++      GLPG
Sbjct: 1305 PGSPGRPGTHGTPGAPGLKGSPGLPGPRGQPGEQGPRGPKGEPGPPGQVTGGQGPGLPG 1363



 Score = 48.5 bits (114), Expect = 0.016,   Method: Composition-based stats.
 Identities = 43/99 (43%), Positives = 52/99 (52%), Gaps = 5/99 (5%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E+CP     P GQKGE    GEMG++G+ G  G PG+ G  G  G  G  G    KG+ G
Sbjct: 1243 EHCPVYC--PKGQKGE---PGEMGLRGQVGPPGDPGLPGSTGAPGPQGPPGSTIAKGERG 1297

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            +PG  G PG  G+ G  G  G PG  G  G  G  G+PG
Sbjct: 1298 FPGADGRPGSPGRPGTHGTPGAPGLKGSPGLPGPRGQPG 1336



 Score = 45.1 bits (105), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 34/89 (38%), Gaps = 30/89 (33%)

Query: 183  PKGDMGYPGRIGLDGR------------------------------DGLPGEPGLDGIPG 212
            PKG  G PG +GL G+                               G PG  G  G PG
Sbjct: 1250 PKGQKGEPGEMGLRGQVGPPGDPGLPGSTGAPGPQGPPGSTIAKGERGFPGADGRPGSPG 1309

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            R G  G PG  GL G  G+PG  G  GE+
Sbjct: 1310 RPGTHGTPGAPGLKGSPGLPGPRGQPGEQ 1338


>gi|94988525|ref|YP_596626.1| collagen-like surface protein [Streptococcus pyogenes MGAS9429]
 gi|94542033|gb|ABF32082.1| collagen-like surface protein [Streptococcus pyogenes MGAS9429]
          Length = 381

 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/176 (44%), Positives = 102/176 (57%), Gaps = 3/176 (1%)

Query: 88  LNAYSRI---PLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
           LN+Y ++    L  ++G         P G QG  G KG+ G  GE G +GE G  G  G 
Sbjct: 86  LNSYLKVLDGSLSQLKGEKGERGPVGPAGPQGLQGTKGDRGETGEQGQRGETGPAGPQGP 145

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            GP GP G  G +GK G  G  G  G  G+PG +G+ G  G  G  G+ G DG+DGLPG+
Sbjct: 146 AGPVGPAGKDGQDGKDGLPGKDGQNGKDGLPGKDGQNGKDGLPGKDGKDGQDGKDGLPGK 205

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G DG+PG++G DG  GKDG  GKDG+PG +G NG+ G+ G  G  G+ G +G+PG
Sbjct: 206 DGKDGLPGKDGKDGQNGKDGQNGKDGLPGKDGQNGKDGLPGKDGKDGQDGKDGLPG 261


>gi|297463635|ref|XP_002702824.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(VII) chain [Bos
            taurus]
          Length = 2933

 Score =  115 bits (287), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 70/161 (43%), Positives = 88/161 (54%), Gaps = 26/161 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD----------EGK 159
            P GL GP G +GE G KG+ G  G +G+KG  GV+ GPPGP+G  G           +G 
Sbjct: 2480 PRGLAGPPGIRGERGEKGDAGASGLKGDKGDSGVILGPPGPRGAKGTRXGERGPRGIDGD 2539

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +GP+GD       G PG++G +G  GD G  G +G  G  G  GEP         G  GI
Sbjct: 2540 KGPRGD------SGEPGEKGTKGEPGDKGSAGLLGARGLMGPKGEP---------GAAGI 2584

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG+ G PGKDG+PG  G  G+ G  GPRG +G+ GI G  G
Sbjct: 2585 PGEPGSPGKDGVPGVRGDKGDVGFMGPRGLKGERGIKGACG 2625



 Score =  112 bits (281), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 68/159 (42%), Positives = 89/159 (55%), Gaps = 9/159 (5%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E  P G+ G  G +G+ G  GE G KGE G+KG+ G++G  G  G  G+ G  G  G+ G
Sbjct: 2530 ERGPRGIDGDKGPRGDSGEPGEKGTKGEPGDKGSAGLLGARGLMGPKGEPGAAGIPGEPG 2589

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             PG  G+PG    RG KGD+G+ G  GL G  G+ G  GLDG  G  G  G PG+ GL G
Sbjct: 2590 SPGKDGVPG---VRGDKGDVGFMGPRGLKGERGIKGACGLDGEKGDKGEAGPPGRPGLAG 2646

Query: 228  K------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +       G+PG  G  G++G+ GP+G+RG  G  G  G
Sbjct: 2647 RRGELGEPGVPGQAGAPGKEGLIGPKGDRGFDGQPGPKG 2685



 Score =  108 bits (271), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 38/182 (20%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGDM- 166
            ++GP G+KG+   +G  G+ G  G  G PG  GPPGP G       PG +G  G +G+  
Sbjct: 1754 VRGPAGEKGD---RGPPGLDGRSGLDGKPGASGPPGPNGAMGKAGDPGRDGLPGLRGEQG 1810

Query: 167  -----------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                                   G  G  G PG++G++G KGD G PGR   +GRDG  G
Sbjct: 1811 PPGPAGPPGAPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGR---EGRDGPKG 1867

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            E G  G PG  G  G+PG+ G PG+   G+PG++G  G++G TGPRG +G  G  G+ G 
Sbjct: 1868 ERGAPGSPGLQGPPGLPGQVGPPGQGFPGVPGSSGPKGDRGETGPRGEQGLPGERGLRGE 1927

Query: 262  PA 263
            P 
Sbjct: 1928 PG 1929



 Score =  108 bits (270), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 64/143 (44%), Positives = 83/143 (58%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
            PG +G  G+ G+ G+ G +G +G  G KG PG  G PG  G PG +G    RG KGD+G+
Sbjct: 2549 PGEKGTKGEPGDKGSAGLLGARGLMGPKGEPGAAGIPGEPGSPGKDGVPGVRGDKGDVGF 2608

Query: 169  PGPQGIPGD---------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             GP+G+ G+         +G++G KG+ G PGR GL GR G  GEPG+ G  G  G +G+
Sbjct: 2609 MGPRGLKGERGIKGACGLDGEKGDKGEAGPPGRPGLAGRRGELGEPGVPGQAGAPGKEGL 2668

Query: 220  PGKDGLPGKDGIPGTNGTNGEKG 242
             G  G  G DG PG  G  GEKG
Sbjct: 2669 IGPKGDRGFDGQPGPKGDQGEKG 2691



 Score =  100 bits (249), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 94/180 (52%), Gaps = 28/180 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IPG 155
            PPGL G  G  G+ GA G  G  G  G+ G PG  G PG +G                PG
Sbjct: 1766 PPGLDGRSGLDGKPGASGPPGPNGAMGKAGDPGRDGLPGLRGEQGPPGPAGPPGAPGKPG 1825

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            ++GK G  G  G PG    PG++G++G KGD G PGR   +GRDG  GE G  G PG  G
Sbjct: 1826 EDGKPGLNGKNGEPGD---PGEDGRKGEKGDSGAPGR---EGRDGPKGERGAPGSPGLQG 1879

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              G+PG+ G PG+ G PG  G+      +GP+G+RG++G  G  G P     + E  SL+
Sbjct: 1880 PPGLPGQVGPPGQ-GFPGVPGS------SGPKGDRGETGPRGEQGLPGERGLRGEPGSLV 1932



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 68/181 (37%), Positives = 85/181 (46%), Gaps = 38/181 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDM 166
            G+ G  G KG++G  G  G+KGERG KGA G+       G  GP G PG  G+RG  G+ 
Sbjct: 2595 GVPGVRGDKGDVGFMGPRGLKGERGIKGACGLDGEKGDKGEAGPPGRPGLAGRRGELGEP 2654

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------- 204
            G PG  G PG EG  GPKGD G+ G+ G  G  G  GE                      
Sbjct: 2655 GVPGQAGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPPGVGGFPGPRGSDGSSGPP 2714

Query: 205  --------PGLDGIPGRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                     G +G+ G+ G  G PG+   G PG  G PG  G  G  G  GPRG +G++ 
Sbjct: 2715 GPPGSIGPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAA 2774

Query: 255  I 255
            +
Sbjct: 2775 L 2775



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 87/243 (35%), Positives = 102/243 (41%), Gaps = 94/243 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVK---------GERGEKGAPGVVGP---PGPQGIPGDEGK 159
            PG  GP G+ GE+G KG+ G           GERG +GAPG  GP    G QG PG+EG+
Sbjct: 1616 PGPVGPRGRDGEVGEKGDDGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEEGR 1675

Query: 160  RG------PKGDMGYP----------------GPQGIPGDEGK----------------- 180
             G      PKGD G P                G +G PGD G+                 
Sbjct: 1676 NGSPGPSGPKGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASG 1735

Query: 181  -------------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---DG 218
                               RGP G+ G  G  GLDGR GL G+PG  G PG NG     G
Sbjct: 1736 ERGVSGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGASGPPGPNGAMGKAG 1795

Query: 219  IPGKDGLPG---------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             PG+DGLPG                     +DG PG NG NGE G  G  G +G+ G +G
Sbjct: 1796 DPGRDGLPGLRGEQGPPGPAGPPGAPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSG 1855

Query: 258  VPG 260
             PG
Sbjct: 1856 APG 1858



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 79/227 (34%), Positives = 94/227 (41%), Gaps = 81/227 (35%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPG--------PQGIPGDEGKR 160
            PG  G  G+KG+ GA   +G  G KGERG  G+PG+ GPPG         QG PG  G  
Sbjct: 1842 PGEDGRKGEKGDSGAPGREGRDGPKGERGAPGSPGLQGPPGLPGQVGPPGQGFPGVPGSS 1901

Query: 161  GPKGDMGYPGP---QGIPGDEG-------------------------------------- 179
            GPKGD G  GP   QG+PG+ G                                      
Sbjct: 1902 GPKGDRGETGPRGEQGLPGERGLRGEPGSLVNAERLLENIGIKTSALREIVETWEESSGG 1961

Query: 180  -------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------------GIPGR 213
                   +RGPKGD G  G  G +G  G  GE G                     G+PG 
Sbjct: 1962 FLPTPERRRGPKGDPGERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPGP 2021

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G PGK G+P   G+PG  G+ GE G  G RG RG+ G  G  G
Sbjct: 2022 TGLAGEPGKPGIP---GLPGPAGSVGEAGRPGERGERGEKGERGEQG 2065



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 95/247 (38%), Gaps = 88/247 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------------------- 143
            PGL GP G  GE G  GE G +GE+GE+G  G                            
Sbjct: 2034 PGLPGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVDEPGSGLS 2093

Query: 144  -VVGPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
               GPPG    +G PG +G RGPKGD G PG +G  G+ G+RGP G  G PG  G+ G +
Sbjct: 2094 REQGPPGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGPNGSPGLPGERGVAGPE 2153

Query: 200  GLPGEPGLDGIP------------------------GRNGMDGIPGKD------------ 223
            G PG  G  G P                        G +G+ G PG+             
Sbjct: 2154 GKPGLQGPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTG 2213

Query: 224  --------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                                GLPG+ G  G  G  G  G TG  G+RG  G+ G PG P 
Sbjct: 2214 AVGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPG 2273

Query: 264  ICAYKRE 270
                K E
Sbjct: 2274 PVGPKGE 2280



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 67/176 (38%), Positives = 82/176 (46%), Gaps = 28/176 (15%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPGPQGIPGDE 157
            E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG  GIPG  
Sbjct: 1978 ERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPGPTGLAGEPGKPGIPGLP 2037

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKG----------DMGYPGRIGLDGRDGLPGEPGL 207
            G  G  G+ G PG +G  G++G+RG +G                ++ +D       EPG 
Sbjct: 2038 GPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVD-------EPG- 2089

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+    G  G  G  G PG DG  G  G  GE G+ G RG  G+ G NG PG P 
Sbjct: 2090 SGLSREQGPPGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGPNGSPGLPG 2145



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 78/244 (31%), Positives = 98/244 (40%), Gaps = 81/244 (33%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDE 157
            GF  +  +    G +GP G +GE G KG+ G  G+RG  G+PG+ G     GP+G PG +
Sbjct: 2100 GFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGPNGSPGLPGERGVAGPEGKPGLQ 2159

Query: 158  GKR---------------------------GPKGDMGYPG-------------------- 170
            G R                           GP G  G PG                    
Sbjct: 2160 GPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLPG 2219

Query: 171  ---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDG 218
                     PQG PG  G+ G  G  G PGR G  G+D   G PG PG  G+PG  G  G
Sbjct: 2220 PPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPGPVGPKG 2279

Query: 219  IPGKDGLPGK-----------DGIPGT--------NGTNGEKGMTGPRGNRGKSGINGVP 259
             PG  G PG+            G PG          G  G++G+ GPRG +G++G  G P
Sbjct: 2280 EPGPMGTPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP 2339

Query: 260  GTPA 263
            G P 
Sbjct: 2340 GDPG 2343



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 71/219 (32%), Positives = 88/219 (40%), Gaps = 70/219 (31%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPG----VVGPPGP--------------------- 150
            GP G  G  G +GE G +G RG KG PG    V+G  GP                     
Sbjct: 1319 GPKGSPGWAGPRGEPGERGPRGPKGEPGEPGQVIGGEGPGLPGQKGDPGPPGPPGSRGPL 1378

Query: 151  ----------QGIPGDEGKRGPKGDMGYPGP---------QGIPGDEGKRGPKGDMGYPG 191
                            +G++G +G+ G PGP          G+PG  G  GP+G +G PG
Sbjct: 1379 GDPGPRGPPGFPGTAVKGEKGDRGEQGPPGPGDGTAALGEPGLPGLPGSPGPQGSVGPPG 1438

Query: 192  RIGLDG--RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG- 248
              G  G   DG PG PG  GIPG  G+ G+PG  G  G  G+ G  G  GE+G  GP G 
Sbjct: 1439 EKGEKGDCEDGAPGLPGQPGIPGERGLRGLPGDAGPKGDRGLTGAAGEKGERGSPGPVGP 1498

Query: 249  -----------------------NRGKSGINGVPGTPAI 264
                                    RG+ G  G PG PA+
Sbjct: 1499 QGLPGVAGRPGPEGPEGPPGPTGRRGEKGEPGRPGDPAV 1537



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 70/197 (35%), Positives = 86/197 (43%), Gaps = 53/197 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
            P G  G  G  GE G+ G+ GV G RG+KG  G +GP    G +GI G  G  G KGD G
Sbjct: 2575 PKGEPGAAGIPGEPGSPGKDGVPGVRGDKGDVGFMGPRGLKGERGIKGACGLDGEKGDKG 2634

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPG------------ 212
              GP G PG  G+RG  G+ G PG+ G  G++GL    G+ G DG PG            
Sbjct: 2635 EAGPPGRPGLAGRRGELGEPGVPGQAGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERG 2694

Query: 213  ------------------------------RNGMDGIPGKDGLPGKD-----GIPGTNGT 237
                                            G+ G  G+ G PG+      G PGT G 
Sbjct: 2695 PPGVGGFPGPRGSDGSSGPPGPPGSIGPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGE 2754

Query: 238  NGEKGMTGPRGNRGKSG 254
             GE+G  GP G RG+ G
Sbjct: 2755 RGEQGRPGPAGPRGEKG 2771



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 71/193 (36%), Positives = 82/193 (42%), Gaps = 52/193 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++GAP         G VGP   PGP G PG    
Sbjct: 2233 PGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPGPVGPKGEPGPMGTPGQAVV 2292

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG   + GD  G+ G KGD G PG  G  G  G  GEP   G PG +G 
Sbjct: 2293 GPPGAKGEKGAPG--ALAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP---GDPGEDGQ 2347

Query: 217  DGIPGKDGLPGKD--------------------------------GIPGTNGTNGEKGMT 244
             G PG  G  G                                  G PG  G  GE G  
Sbjct: 2348 KGAPGPKGHKGDPGVGVQGPPGPVGPPGLKGDSGPPGSPGPPGIVGFPGQTGPRGELGQP 2407

Query: 245  GPRGNRGKSGING 257
            GP G RG +G  G
Sbjct: 2408 GPSGERGLAGAPG 2420



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 70/175 (40%), Positives = 88/175 (50%), Gaps = 29/175 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRGPKG 164
            PG +GP G++G IG  GE G KG+RG+ G       A G  G PGP G+ G+ GK G  G
Sbjct: 1976 PGERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPGPTGLAGEPGKPGIPG 2035

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------------EPGLDG 209
                PGP G  G+ G+ G +G+ G  G  G  GRDGLPG               EPG  G
Sbjct: 2036 ---LPGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVDEPG-SG 2091

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            +    G  G  G  G PG DG  G  G  GE G+   +G+RG+ G  G  G+P +
Sbjct: 2092 LSREQGPPGFKGAKGDPGSDGDRGPKGDRGEPGI---KGDRGEPGQRGPNGSPGL 2143



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 75/205 (36%), Positives = 90/205 (43%), Gaps = 64/205 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG----------------------- 149
            GL GP G+KGE G  GE G  GE G+KGAPG  G  G                       
Sbjct: 2322 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGHKGDPGVGVQGPPGPVGPPGLKGDSG 2381

Query: 150  ------PQGIPGDEGKRGPKGDMGYPGPQ------GIPGDE------------------- 178
                  P GI G  G+ GP+G++G PGP       G PG E                   
Sbjct: 2382 PPGSPGPPGIVGFPGQTGPRGELGQPGPSGERGLAGAPGREGAPGPLGPPGPPGSAGVPG 2441

Query: 179  --GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
              G +G KGD G     GL G  G  GEPG+ G  GR G++   G  GL G  GI G  G
Sbjct: 2442 VPGLKGDKGDTG----AGLPGARGERGEPGVRGEDGRPGLE---GPRGLAGPPGIRGERG 2494

Query: 237  TNGEKGMTGPRGNRGKSG-INGVPG 260
              G+ G +G +G++G SG I G PG
Sbjct: 2495 EKGDAGASGLKGDKGDSGVILGPPG 2519



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 65/191 (34%), Positives = 84/191 (43%), Gaps = 40/191 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEM-----------GVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            PG QG +G  GE G KG+            G+ GERG +G PG  GP G +G+ G  G++
Sbjct: 1428 PGPQGSVGPPGEKGEKGDCEDGAPGLPGQPGIPGERGLRGLPGDAGPKGDRGLTGAAGEK 1487

Query: 161  GPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G +G  G  GPQG+PG                 G+RG KG+ G PG   +          
Sbjct: 1488 GERGSPGPVGPQGLPGVAGRPGPEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGAKGE 1547

Query: 206  GLD-GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS----------- 253
              D G PG  G  G  G+ G PG   +PG  G  G+ G  GP G  G++           
Sbjct: 1548 KGDMGPPGPKGATGFKGEQGSPGL-ALPGDPGPKGDPGGRGPIGLTGRAGPPGDSGPPGE 1606

Query: 254  -GINGVPGTPA 263
             G  G PG+P 
Sbjct: 1607 KGDPGRPGSPG 1617



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 91/241 (37%), Gaps = 75/241 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------------GP 147
            PG  GP G +GE G +GE G+ GERG +G PG +                          
Sbjct: 1898 PGSSGPKGDRGETGPRGEQGLPGERGLRGEPGSLVNAERLLENIGIKTSALREIVETWEE 1957

Query: 148  PGPQGIPGDEGKRGPKGD---MGYPGPQGIPGDEGKRGPKGDMGYP----------GRIG 194
                 +P  E +RGPKGD    G PG +G  G  G+RGPKGD G P          G  G
Sbjct: 1958 SSGGFLPTPERRRGPKGDPGERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERG 2017

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE-------------- 240
            L G  GL GEPG  GIPG  G  G  G+ G PG+ G  G  G  GE              
Sbjct: 2018 LPGPTGLAGEPGKPGIPGLPGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPG 2077

Query: 241  ------------------------KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
                                    KG  G  G+ G  G  G  G P I   + E     P
Sbjct: 2078 PPGPKVAVDEPGSGLSREQGPPGFKGAKGDPGSDGDRGPKGDRGEPGIKGDRGEPGQRGP 2137

Query: 277  N 277
            N
Sbjct: 2138 N 2138



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 71/203 (34%), Positives = 85/203 (41%), Gaps = 63/203 (31%)

Query: 112  PGLQGPIG------------------QKGEIGAKGEMGVKGERGEK-------------- 139
            PGLQGP G                    G  G +G  G+KGE GE               
Sbjct: 2156 PGLQGPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAV 2215

Query: 140  ------------------GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
                              G PG VG  G  G PG +G  G  GD G PG  G PG  G  
Sbjct: 2216 GLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGATGKDGDRGAPGVPGSPGLPGPV 2275

Query: 182  GPKGD---MGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGK 228
            GPKG+   MG PG+  +G  G  G  G PG     L G PG  G  G+P   G+ G  G+
Sbjct: 2276 GPKGEPGPMGTPGQAVVGPPGAKGEKGAPGALAGDLVGEPGAKGDRGLPGPRGEKGEAGR 2335

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             G PG  G +G+KG  GP+G++G
Sbjct: 2336 AGEPGDPGEDGQKGAPGPKGHKG 2358



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 69/198 (34%), Positives = 86/198 (43%), Gaps = 50/198 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------D 156
            PG +G  G  G+ G KG+ G+ G  GEKG  G  GP GPQG+PG                
Sbjct: 1460 PGERGLRGLPGDAGPKGDRGLTGAAGEKGERGSPGPVGPQGLPGVAGRPGPEGPEGPPGP 1519

Query: 157  EGKRGPKGDMGYPGPQGI----------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             G+RG KG+ G PG   +           GD G  GPKG  G+ G  G  G   LPG+PG
Sbjct: 1520 TGRRGEKGEPGRPGDPAVGPGGAGAKGEKGDMGPPGPKGATGFKGEQGSPGL-ALPGDPG 1578

Query: 207  LDGIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNGEKGMTGPRGNR------- 250
              G PG  G  G+ G+ G P         G  G PG+ G  G +G  G  G +       
Sbjct: 1579 PKGDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPGPVGPRGRDGEVGEKGDDGPPG 1638

Query: 251  --------GKSGINGVPG 260
                    G+ G+ G PG
Sbjct: 1639 DPGLPGKAGERGLRGAPG 1656



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 59/158 (37%), Positives = 68/158 (43%), Gaps = 44/158 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
            GL G  G KGE G  G  G+ G RGE G PGV   PG  G PG EG  GPKGD G+   P
Sbjct: 2625 GLDGEKGDKGEAGPPGRPGLAGRRGELGEPGV---PGQAGAPGKEGLIGPKGDRGFDGQP 2681

Query: 170  GPQGIPGDEGKR------------------------------------GPKGDMGYPGR- 192
            GP+G  G++G+R                                    G KG+ G PG  
Sbjct: 2682 GPKGDQGEKGERGPPGVGGFPGPRGSDGSSGPPGPPGSIGPKGPEGLQGQKGERGPPGES 2741

Query: 193  -IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
             +G  G  G PGE G  G PG  G  G  G+  L   D
Sbjct: 2742 VVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALTEDD 2779



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 69/194 (35%), Positives = 85/194 (43%), Gaps = 52/194 (26%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGYPGP---- 171
            G++G  GA G  G  G  G  GAPG  G PG   P+G PG+ G RGPKG+ G PG     
Sbjct: 1295 GERGFPGADGPPGSPGRPGTPGAPGPKGSPGWAGPRGEPGERGPRGPKGEPGEPGQVIGG 1354

Query: 172  --QGIPGDE--------------------------------GKRGPKGDMGYPGRIGLDG 197
               G+PG +                                G++G +G+ G PG      
Sbjct: 1355 EGPGLPGQKGDPGPPGPPGSRGPLGDPGPRGPPGFPGTAVKGEKGDRGEQGPPGPGDGTA 1414

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKD-----------GLPGKDGIPGTNGTNGEKGMTGP 246
              G PG PGL G PG  G  G PG+            GLPG+ GIPG  G  G  G  GP
Sbjct: 1415 ALGEPGLPGLPGSPGPQGSVGPPGEKGEKGDCEDGAPGLPGQPGIPGERGLRGLPGDAGP 1474

Query: 247  RGNRGKSGINGVPG 260
            +G+RG +G  G  G
Sbjct: 1475 KGDRGLTGAAGEKG 1488



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 66/193 (34%), Positives = 80/193 (41%), Gaps = 34/193 (17%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD- 156
            A++G      E  PPG        GE G  G  G  G +G       VGPPG +G  GD 
Sbjct: 1393 AVKGEKGDRGEQGPPGPGDGTAALGEPGLPGLPGSPGPQGS------VGPPGEKGEKGDC 1446

Query: 157  -EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG--- 212
             +G  G  G  G PG +G+ G  G  GPKGD G  G  G  G  G PG  G  G+PG   
Sbjct: 1447 EDGAPGLPGQPGIPGERGLRGLPGDAGPKGDRGLTGAAGEKGERGSPGPVGPQGLPGVAG 1506

Query: 213  ---------RNGMDGIPGKDGLPGKDGIPGTN-------------GTNGEKGMTGPRGNR 250
                       G  G  G+ G PG+ G P                G  G KG TG +G +
Sbjct: 1507 RPGPEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGAKGEKGDMGPPGPKGATGFKGEQ 1566

Query: 251  GKSGINGVPGTPA 263
            G  G+  +PG P 
Sbjct: 1567 GSPGL-ALPGDPG 1578



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 60/142 (42%), Positives = 75/142 (52%), Gaps = 17/142 (11%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            ++G  G  G  G +GE+G+PG+   G PGP+   GD G RGP G  G  GP G  G  G+
Sbjct: 1550 DMGPPGPKGATGFKGEQGSPGLALPGDPGPK---GDPGGRGPIGLTGRAGPPGDSGPPGE 1606

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------GRNGMDGIPGKDGLPGK--- 228
            +G  G  G PG +G  GRDG  GE G DG P         G  G+ G PG  G  G+   
Sbjct: 1607 KGDPGRPGSPGPVGPRGRDGEVGEKGDDGPPGDPGLPGKAGERGLRGAPGARGPVGEKGD 1666

Query: 229  DGIPGTNGTNGEKGMTGPRGNR 250
             G PG  G NG  G +GP+G+R
Sbjct: 1667 QGDPGEEGRNGSPGPSGPKGDR 1688



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 91/216 (42%), Gaps = 63/216 (29%)

Query: 108  EYCPPGLQ--GPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPPGPQGIPGD 156
            E   PGL   G  G KG+ G +G +G+ G           GEKG PG  G PGP G  G 
Sbjct: 1565 EQGSPGLALPGDPGPKGDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPGPVGPRGR 1624

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G+ G KGD G PG  G+PG  G+RG +G  G  G +G  G  G PGE G +G PG +G 
Sbjct: 1625 DGEVGEKGDDGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEEGRNGSPGPSGP 1684

Query: 217  DGI-------------------PGKDGLP---------------------GKDGIPG--- 233
             G                     G+ G P                     G+ G+ G   
Sbjct: 1685 KGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGERGVSGLRG 1744

Query: 234  ---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
                       G  GEKG  GP G  G+SG++G PG
Sbjct: 1745 PPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPG 1780



 Score = 48.9 bits (115), Expect = 0.012,   Method: Composition-based stats.
 Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 29/117 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG------------------------APGVVGP 147
            PG +G IG KG+ G  G+ G KG++GEKG                         PG +GP
Sbjct: 2663 PGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPPGVGGFPGPRGSDGSSGPPGPPGSIGP 2722

Query: 148  PGPQGIPGDEGKRGPKGD--MGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRD 199
             GP+G+ G +G+RGP G+  +G PG  G PG+   +G+ GP G  G  G   L   D
Sbjct: 2723 KGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALTEDD 2779


>gi|313221851|emb|CBY38921.1| unnamed protein product [Oikopleura dioica]
          Length = 888

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 93/175 (53%), Gaps = 24/175 (13%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDEGKR 160
           C PG +GP G+KGE G  GE G  G  G  G PG+ GP          GP+G  G++G +
Sbjct: 670 CIPGQKGPCGKKGEAGTPGEDGFDGHPGNPGKPGLPGPVGSVGRPGNEGPKGAKGEQGIQ 729

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GP GD G+PG  G PG  GK+G KG  G  GR GL G  G  GEPGL G  G+ G +G  
Sbjct: 730 GPDGDCGHPGEVGEPGSPGKKGQKGSPGIQGRPGLQGPQGPIGEPGLPGADGKKGANGQK 789

Query: 221 GKDGLPGKDGIPG---------------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G PGK G  G                +G +G +G  GP GN G++G+ G+PG
Sbjct: 790 GPRGKPGKPGASGISGNPGPQGPPGPDGNDGQDGAQGPVGPAGNVGRAGLKGLPG 844



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 79/158 (50%), Gaps = 14/158 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMG--VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           PG  GP G KG  G +GE G  + G++G  G  G  G PG  G  G  G  G  G  G  
Sbjct: 649 PGRDGPAGLKGLPGKQGEPGKCIPGQKGPCGKKGEAGTPGEDGFDGHPGNPGKPGLPGPV 708

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP--- 226
           G  G PG+EG +G KG+ G     G DG  G PGE G  G PG+ G  G PG  G P   
Sbjct: 709 GSVGRPGNEGPKGAKGEQGI---QGPDGDCGHPGEVGEPGSPGKKGQKGSPGIQGRPGLQ 765

Query: 227 ------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                 G+ G+PG +G  G  G  GPRG  GK G +G+
Sbjct: 766 GPQGPIGEPGLPGADGKKGANGQKGPRGKPGKPGASGI 803



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 78/161 (48%), Gaps = 26/161 (16%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDMGYPGPQG-----IPGDE 178
           +G  G+RG  GAPG  G  G  G+PG  G+ G      P G  G PG QG     IPG +
Sbjct: 616 VGPDGQRGNDGAPGPDGRDGADGLPGQAGRDGKPGRDGPAGLKGLPGKQGEPGKCIPGQK 675

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------DGIPGRNGMDGIPGKDG-- 224
           G  G KG+ G PG  G DG  G PG+PGL            +G  G  G  GI G DG  
Sbjct: 676 GPCGKKGEAGTPGEDGFDGHPGNPGKPGLPGPVGSVGRPGNEGPKGAKGEQGIQGPDGDC 735

Query: 225 -LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             PG+ G PG+ G  G+KG  G +G  G  G  G  G P +
Sbjct: 736 GHPGEVGEPGSPGKKGQKGSPGIQGRPGLQGPQGPIGEPGL 776



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 85/195 (43%), Gaps = 49/195 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------------------P 150
           PG +G  G  GE G  G+ G  G+RGE G  G  G PG                     P
Sbjct: 536 PGKEGAPGVVGEPGEPGQHGTDGQRGETGEQGPPGTPGRDGFDGPTGPPGPPGPDGLVGP 595

Query: 151 QGIPGDE--------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
            G PG +              G  G +G+ G PGP G  G +G  G  G  G PGR G  
Sbjct: 596 SGPPGLDADDGAGGKGDDGPVGPDGQRGNDGAPGPDGRDGADGLPGQAGRDGKPGRDGPA 655

Query: 197 GRDGLPGE--------PGLDGIPGRNGMDGIPGKDGL------PGKDGIPGTNGTNGEKG 242
           G  GLPG+        PG  G  G+ G  G PG+DG       PGK G+PG  G+ G  G
Sbjct: 656 GLKGLPGKQGEPGKCIPGQKGPCGKKGEAGTPGEDGFDGHPGNPGKPGLPGPVGSVGRPG 715

Query: 243 MTGPRGNRGKSGING 257
             GP+G +G+ GI G
Sbjct: 716 NEGPKGAKGEQGIQG 730



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 70/135 (51%), Gaps = 21/135 (15%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM-- 166
           PG +GP G KGE G +G   + G  GE GE G+PG  G  G  GI G  G +GP+G +  
Sbjct: 714 PGNEGPKGAKGEQGIQGPDGDCGHPGEVGEPGSPGKKGQKGSPGIQGRPGLQGPQGPIGE 773

Query: 167 -GYPGPQGIPGDEGKRGPKGDMGYPGRIGL---------------DGRDGLPGEPGLDGI 210
            G PG  G  G  G++GP+G  G PG  G+               DG+DG  G  G  G 
Sbjct: 774 PGLPGADGKKGANGQKGPRGKPGKPGASGISGNPGPQGPPGPDGNDGQDGAQGPVGPAGN 833

Query: 211 PGRNGMDGIPGKDGL 225
            GR G+ G+PG +G+
Sbjct: 834 VGRAGLKGLPGPNGV 848



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 75/184 (40%), Gaps = 60/184 (32%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------- 192
           GA G  GP GP G PG EG  G  G+ G PG  G  G  G+ G +G  G PGR       
Sbjct: 522 GASGDRGPQGPTGKPGKEGAPGVVGEPGEPGQHGTDGQRGETGEQGPPGTPGRDGFDGPT 581

Query: 193 ----------------------------------IGLDGR---------------DGLPG 203
                                             +G DG+               DGLPG
Sbjct: 582 GPPGPPGPDGLVGPSGPPGLDADDGAGGKGDDGPVGPDGQRGNDGAPGPDGRDGADGLPG 641

Query: 204 EPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G DG PGR+   G+ G+PGK G PGK  IPG  G  G+KG  G  G  G  G  G PG
Sbjct: 642 QAGRDGKPGRDGPAGLKGLPGKQGEPGK-CIPGQKGPCGKKGEAGTPGEDGFDGHPGNPG 700

Query: 261 TPAI 264
            P +
Sbjct: 701 KPGL 704



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 66/167 (39%), Gaps = 46/167 (27%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-- 208
           Q + G  G RGP+G  G PG +G PG  G+ G  G  G  G+ G  G  G PG PG D  
Sbjct: 518 QKLTGASGDRGPQGPTGKPGKEGAPGVVGEPGEPGQHGTDGQRGETGEQGPPGTPGRDGF 577

Query: 209 ---------------------------------------GIPGRNGMDGIPGKDGLPGKD 229
                                                  G  G+ G DG PG DG  G D
Sbjct: 578 DGPTGPPGPPGPDGLVGPSGPPGLDADDGAGGKGDDGPVGPDGQRGNDGAPGPDGRDGAD 637

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGING-----VPGTPAICAYKRES 271
           G+PG  G +G+ G  GP G +G  G  G     +PG    C  K E+
Sbjct: 638 GLPGQAGRDGKPGRDGPAGLKGLPGKQGEPGKCIPGQKGPCGKKGEA 684


>gi|149069174|gb|EDM18615.1| procollagen, type IX, alpha 1 [Rattus norvegicus]
          Length = 697

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 105/189 (55%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 438 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 497

Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G  G PGPQG+PG   D+G+RGP      KGD G  G +GIPG  G   PKGD G PG
Sbjct: 498 ARGFDGDPGPQGVPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSPG---PKGDTGLPG 554

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              +DGRDG+PG PG  G  G+ G  G  G  GLPG  GIPG  G  GEKG TGP G  G
Sbjct: 555 ---VDGRDGIPGMPGTKGEAGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGPPGKPG 611

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 612 QLGSSGKPG 620



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/184 (45%), Positives = 103/184 (55%), Gaps = 21/184 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 439 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 498

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQG+PG   D+G+RGP G+ G  G  G+ G  G+PG PG        G  G+
Sbjct: 499 RGFDGDPGPQGVPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSPGP------KGDTGL 552

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
           PG DG   +DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  +  P  +
Sbjct: 553 PGVDG---RDGIPGMPGTKGEAGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGPPGK 609

Query: 280 TSQL 283
             QL
Sbjct: 610 PGQL 613



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 81/159 (50%), Gaps = 18/159 (11%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP- 169
           P G+ G  G +G+ G  GE G KG+RG +G+ G+ G P            GPKGD G P 
Sbjct: 507 PQGVPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSP------------GPKGDTGLPG 554

Query: 170 --GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G  G
Sbjct: 555 VDGRDGIPGMPGTKGEAGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGPPGKPGQLG 614

Query: 228 KDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G PG  G  GE G  GPR   G+RG  G  G PG P 
Sbjct: 615 SSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPG 653


>gi|354467156|ref|XP_003496037.1| PREDICTED: collagen alpha-1(IX) chain-like [Cricetulus griseus]
          Length = 1041

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 105/189 (55%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 545 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 604

Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQGIPG   D+G+RGP      KGD G  G +GIPG  G   PKGD G PG
Sbjct: 605 ARGLDGEPGPQGIPGAAGDQGQRGPSGEAGPKGDRGAQGSRGIPGSPG---PKGDTGLPG 661

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              +DGRDG+PG PG  G  G+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G
Sbjct: 662 ---VDGRDGIPGMPGTKGEAGKPGPPGDVGSQGLPGVPGIPGAKGVAGEKGNTGAPGKPG 718

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 719 QLGSSGKPG 727



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/184 (45%), Positives = 101/184 (54%), Gaps = 21/184 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 546 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 605

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQGIPG   D+G+RGP G+ G  G  G  G  G+PG PG        G  G+
Sbjct: 606 RGLDGEPGPQGIPGAAGDQGQRGPSGEAGPKGDRGAQGSRGIPGSPGP------KGDTGL 659

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
           PG DG   +DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  +     +
Sbjct: 660 PGVDG---RDGIPGMPGTKGEAGKPGPPGDVGSQGLPGVPGIPGAKGVAGEKGNTGAPGK 716

Query: 280 TSQL 283
             QL
Sbjct: 717 PGQL 720



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  P G  GP G +G  G++G  G  G +G+ G PGV G  G  G+PG  
Sbjct: 616 GIPGAAGDQGQRGPSGEAGPKGDRGAQGSRGIPGSPGPKGDTGLPGVDGRDGIPGMPGT- 674

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
                KG+ G PGP                  PG +G  G  G+PG PG  G+ G  G  
Sbjct: 675 -----KGEAGKPGP------------------PGDVGSQGLPGVPGIPGAKGVAGEKGNT 711

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
           G PGK G  G  G PG  G  GE G  GPR   G+RG++G  G PG P 
Sbjct: 712 GAPGKPGQLGSSGKPGQQGPPGEVGPRGPRGLTGSRGEAGPEGSPGIPG 760



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 72/137 (52%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  
Sbjct: 538 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV 597

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           GD G  G  GLDG  G  G PG  G  G+ G  G  G  G  G  G  G  G+ G KG T
Sbjct: 598 GDKGEKGARGLDGEPGPQGIPGAAGDQGQRGPSGEAGPKGDRGAQGSRGIPGSPGPKGDT 657

Query: 245 GPRGNRGKSGINGVPGT 261
           G  G  G+ GI G+PGT
Sbjct: 658 GLPGVDGRDGIPGMPGT 674



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 78/173 (45%), Gaps = 33/173 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  G+ G+ G  G++G +G  G  G PG  G  G +G  G  GK G  G  G PG 
Sbjct: 669 PGMPGTKGEAGKPGPPGDVGSQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKPGQ 728

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP----------------------------- 202
           QG PG+ G RGP+G  G  G  G +G  G+P                             
Sbjct: 729 QGPPGEVGPRGPRGLTGSRGEAGPEGSPGIPGKLGPLGSPGLPGLPGPPGLPGMKGDRGV 788

Query: 203 -GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRG 251
            GEPG  G  G +G +G  G  G  G  G+PG  G+    GE G+ GP G RG
Sbjct: 789 FGEPGPKGEQGASGEEGEAGARGDLGDIGLPGPKGSVGNPGEPGLRGPEGVRG 841



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 94/229 (41%), Gaps = 72/229 (31%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPG 155
           E  P G+ G  G +G+ G  GE G KG+RG +G+ G+ G PGP+G            IPG
Sbjct: 611 EPGPQGIPGAAGDQGQRGPSGEAGPKGDRGAQGSRGIPGSPGPKGDTGLPGVDGRDGIPG 670

Query: 156 ------DEGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
                 + GK GP GD+G    PG  GIPG +G  G KG+ G PG+ G  G  G PG+ G
Sbjct: 671 MPGTKGEAGKPGPPGDVGSQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKPGQQG 730

Query: 207 ---------------LDGIPGRNGMDGIPGKD---------------------------G 224
                            G  G  G  GIPGK                            G
Sbjct: 731 PPGEVGPRGPRGLTGSRGEAGPEGSPGIPGKLGPLGSPGLPGLPGPPGLPGMKGDRGVFG 790

Query: 225 LPGKDGIPGTNGTNGEKG---------MTGPRGNRGKSGINGVPGTPAI 264
            PG  G  G +G  GE G         + GP+G+ G  G  G+ G   +
Sbjct: 791 EPGPKGEQGASGEEGEAGARGDLGDIGLPGPKGSVGNPGEPGLRGPEGV 839



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 78/181 (43%), Gaps = 54/181 (29%)

Query: 112 PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA    G++G  G+ G++G PG VGP GP+G+ G  G+ GP+G  G 
Sbjct: 699 PGAKGVAGEKGNTGAPGKPGQLGSSGKPGQQGPPGEVGPRGPRGLTGSRGEAGPEGSPGI 758

Query: 169 PGP------------------------------------QGIPGDEGKRGPKGDMGYPGR 192
           PG                                     QG  G+EG+ G +GD+G  G 
Sbjct: 759 PGKLGPLGSPGLPGLPGPPGLPGMKGDRGVFGEPGPKGEQGASGEEGEAGARGDLGDIGL 818

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPGTNGT 237
            G  G  G PGEPGL G  G  G+                G  G  GLPG  G PG   T
Sbjct: 819 PGPKGSVGNPGEPGLRGPEGVRGLPGMEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPT 878

Query: 238 N 238
           +
Sbjct: 879 D 879


>gi|301604858|ref|XP_002932077.1| PREDICTED: collagen alpha-1(VI) chain-like [Xenopus (Silurana)
           tropicalis]
          Length = 1025

 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 93/164 (56%), Gaps = 5/164 (3%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G   +T +   PG  G  G+KGE G +G+ G  G  G++G PG  GPPG   + G  G R
Sbjct: 410 GSTGNTGDKGDPGPNGSAGEKGESGDEGDAGADGPPGKRGEPGEQGPPG---VSGARGAR 466

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G KG+ G  GP+G  GDEG RGP+G  G  G  GL G  G+ GE G DG PG NG DG P
Sbjct: 467 GEKGEAGPQGPKGYRGDEGPRGPEGPKGPRGAKGLPGEQGIAGERGDDGRPG-NGTDGFP 525

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV-PGTPA 263
           G  G PG  G PG+NGT G  G  G  G +G+ G + V PG P 
Sbjct: 526 GFQGYPGSRGDPGSNGTKGYPGPKGDEGEQGEPGDDNVSPGPPG 569



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 88/168 (52%), Gaps = 11/168 (6%)

Query: 98  AMQGFCNSTKEYCPP-----GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
           A QG C      C P     G  GP G +GE+G  G  G +G  G+ G  G +GP G QG
Sbjct: 267 AEQGCCTYE---CRPSRGSAGPAGPPGYEGEVGKPGLPGDRGLPGDPGRQGDIGPVGYQG 323

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           + GD+G RG KG  G  G +G   ++GKRG  G  G  G  G +G  G  G PG DG PG
Sbjct: 324 MKGDQGTRGEKGGRGAKGSKG---EKGKRGIDGIDGQKGEDGYNGLPGCKGSPGFDGAPG 380

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G PG  G  G+ G+PGT GT G  G TG  G++G  G NG  G
Sbjct: 381 SPGPKGDPGSYGPKGEKGVPGTPGTAGRSGSTGNTGDKGDPGPNGSAG 428



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/138 (47%), Positives = 78/138 (56%), Gaps = 8/138 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G++GE G +G  GV G RG +G  G  GP GP+G  GDEG RGP+G  G  G +
Sbjct: 440 GADGPPGKRGEPGEQGPPGVSGARGARGEKGEAGPQGPKGYRGDEGPRGPEGPKGPRGAK 499

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG------KDGLP 226
           G+PG++G  G +GD G PG  G DG  G  G PG  G PG NG  G PG      + G P
Sbjct: 500 GLPGEQGIAGERGDDGRPGN-GTDGFPGFQGYPGSRGDPGSNGTKGYPGPKGDEGEQGEP 558

Query: 227 GKDGI-PGTNGTNGEKGM 243
           G D + PG  G  G KG 
Sbjct: 559 GDDNVSPGPPGPKGAKGY 576



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 87/176 (49%), Gaps = 30/176 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  G  G KG+ G +GE+G +GA G  G  G +GI G +G++G  G  G PG 
Sbjct: 310 PGRQGDIGPVGYQGMKGDQGTRGEKGGRGAKGSKGEKGKRGIDGIDGQKGEDGYNGLPGC 369

Query: 172 QGIP------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN----- 214
           +G P            GD G  GPKG+ G PG  G  GR G  G  G  G PG N     
Sbjct: 370 KGSPGFDGAPGSPGPKGDPGSYGPKGEKGVPGTPGTAGRSGSTGNTGDKGDPGPNGSAGE 429

Query: 215 ----------GMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGNRGKSGING 257
                     G DG PGK G PG+ G PG +   G  GEKG  GP+G +G  G  G
Sbjct: 430 KGESGDEGDAGADGPPGKRGEPGEQGPPGVSGARGARGEKGEAGPQGPKGYRGDEG 485



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 79/161 (49%), Gaps = 6/161 (3%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G   S  E    G+ G  GQKGE G  G  G KG  G  GAPG    PGP+G PG  G 
Sbjct: 337 RGAKGSKGEKGKRGIDGIDGQKGEDGYNGLPGCKGSPGFDGAPGS---PGPKGDPGSYGP 393

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G KG  G PG  G  G  G  G KGD G  G  G  G  G  G+ G DG PG+ G    
Sbjct: 394 KGEKGVPGTPGTAGRSGSTGNTGDKGDPGPNGSAGEKGESGDEGDAGADGPPGKRGE--- 450

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG+ G PG  G  G  G  GE G  GP+G RG  G  G  G
Sbjct: 451 PGEQGPPGVSGARGARGEKGEAGPQGPKGYRGDEGPRGPEG 491



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 62/125 (49%), Gaps = 22/125 (17%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKG 164
           E  PPG+ G  G +GE G  G  G KG RG++G  G  GP GP   +G+PG++G  G +G
Sbjct: 453 EQGPPGVSGARGARGEKGEAGPQGPKGYRGDEGPRGPEGPKGPRGAKGLPGEQGIAGERG 512

Query: 165 D--------------MGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGL 207
           D               GYPG +G PG  G +   GPKGD G  G  G D     PG PG 
Sbjct: 513 DDGRPGNGTDGFPGFQGYPGSRGDPGSNGTKGYPGPKGDEGEQGEPGDDNVS--PGPPGP 570

Query: 208 DGIPG 212
            G  G
Sbjct: 571 KGAKG 575



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 49/91 (53%), Gaps = 12/91 (13%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP--GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           P G +GP G +G  G  GE G+ GERG+ G P  G  G PG QG PG  G  G  G  GY
Sbjct: 486 PRGPEGPKGPRGAKGLPGEQGIAGERGDDGRPGNGTDGFPGFQGYPGSRGDPGSNGTKGY 545

Query: 169 PGP------QGIPGDE----GKRGPKGDMGY 189
           PGP      QG PGD+    G  GPKG  GY
Sbjct: 546 PGPKGDEGEQGEPGDDNVSPGPPGPKGAKGY 576



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 18/121 (14%)

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G  GP GP G  G+ GK       G PG +G+PGD G++G  G +GY G   + G  G  
Sbjct: 281 GSAGPAGPPGYEGEVGK------PGLPGDRGLPGDPGRQGDIGPVGYQG---MKGDQGTR 331

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE G     GR    G  G  G  GK GI G +G  GE G  G  G +G  G +G PG+P
Sbjct: 332 GEKG-----GR----GAKGSKGEKGKRGIDGIDGQKGEDGYNGLPGCKGSPGFDGAPGSP 382

Query: 263 A 263
            
Sbjct: 383 G 383


>gi|297467556|ref|XP_601325.5| PREDICTED: collagen alpha-1(IX) chain, partial [Bos taurus]
          Length = 1021

 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/192 (45%), Positives = 106/192 (55%), Gaps = 30/192 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VKGERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G               V GE+GEKG
Sbjct: 772 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGGLGEVGAQGPPGAQGLRGITGVAGEKGEKG 831

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIG 194
           A G+ G PGPQG+PG   D+G+RGP G++G  G   PQG PG  G  GPKGD G PG   
Sbjct: 832 ARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSPGIPGLPGPKGDTGLPG--- 888

Query: 195 LDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           +DGRDG+PG PG  G PG+       G+ G+PG  GLPG  G+ G  G  G  G  G  G
Sbjct: 889 VDGRDGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGLPGAKGVAGEKGNTGAPGKPGQLG 948

Query: 249 NRGKSGINGVPG 260
           N GK G  G PG
Sbjct: 949 NSGKPGRQGPPG 960



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 79/150 (52%), Gaps = 18/150 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE+G KG+RG +G+PG+ G P            GPKGD G
Sbjct: 838 EPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSPGIPGLP------------GPKGDTG 885

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 886 LPGVDGRDGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGLPGAKGVAGEKGNTGAPGKPG 945

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG  G  GE    GPRG RG SG
Sbjct: 946 QLGNSGKPGRQGPPGE---VGPRGPRGLSG 972



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 63/120 (52%), Gaps = 6/120 (5%)

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           PPG  G PG  G RG KG  G     G PG +G +G +GD G  G +G  G  G  G  G
Sbjct: 763 PPGRSGYPGLPGMRGHKGAKGE---IGEPGRQGHKGEEGDQGGLGEVGAQGPPGAQGLRG 819

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           + G+ G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 820 ITGVAGEKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSPGIPGLPG 879



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 69/137 (50%), Gaps = 18/137 (13%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  GP G +G  G+ G  G+ G +G+ G PGV G  G  G+PG +G+ G  G  G  G
Sbjct: 856 PPGEIGPKGDRGPQGSPGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGEAG 915

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            QG+PG                 GL G  G+ GE G  G PG+ G  G  GK   PG+ G
Sbjct: 916 LQGLPGIP---------------GLPGAKGVAGEKGNTGAPGKPGQLGNSGK---PGRQG 957

Query: 231 IPGTNGTNGEKGMTGPR 247
            PG  G  G +G++G R
Sbjct: 958 PPGEVGPRGPRGLSGSR 974


>gi|348540050|ref|XP_003457501.1| PREDICTED: collagen alpha-2(VI) chain-like [Oreochromis niloticus]
          Length = 1012

 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/159 (48%), Positives = 90/159 (56%), Gaps = 2/159 (1%)

Query: 103 CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           C  TK   PPG +G  GQKG  G  GE G KGERG  G PG+ GP G  GI G+ G +G 
Sbjct: 241 CLETKG--PPGPKGHRGQKGAKGDHGEPGQKGERGRPGDPGIEGPIGQPGIKGEPGLKGE 298

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG++G  G +G+ G  G+ G  G  G  GRIG  G  G PG+ G DG PG  G  G PG 
Sbjct: 299 KGEIGTQGKKGVAGIPGRNGTDGQKGKIGRIGAPGCKGDPGDSGPDGHPGDVGERGPPGT 358

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           DG  G  G PG +G  G  G TGP+G RG  G  G+PG 
Sbjct: 359 DGDKGDPGRPGRSGPPGPDGDTGPKGERGSPGSPGIPGA 397



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/185 (43%), Positives = 96/185 (51%), Gaps = 36/185 (19%)

Query: 112 PGLQGPIGQ------------KGEIGAKGEMGV------------KGERGEKGAPGVVGP 147
           PG++GPIGQ            KGEIG +G+ GV            KG+ G  GAPG  G 
Sbjct: 278 PGIEGPIGQPGIKGEPGLKGEKGEIGTQGKKGVAGIPGRNGTDGQKGKIGRIGAPGCKGD 337

Query: 148 P---GPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
           P   GP G PGD G+RGP      KGD G PG  G PG +G  GPKG+ G PG  G+ G 
Sbjct: 338 PGDSGPDGHPGDVGERGPPGTDGDKGDPGRPGRSGPPGPDGDTGPKGERGSPGSPGIPGA 397

Query: 199 DGLPGEPGLDGIP---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  G PG+ G+P   GR G  G  G  G PG  G  G NG  G++G+ G  G+ G  G 
Sbjct: 398 KGNSGTPGVPGVPGEKGRRGDYGPKGSQGPPGTKGEKGENGPEGQRGLPGETGSDGAKGD 457

Query: 256 NGVPG 260
            G+PG
Sbjct: 458 VGLPG 462



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 91/169 (53%), Gaps = 24/169 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQ---GIPGDEGKRGP 162
           PG  GP G  G++G +G  G  G++G+ G PG  GP       GP+   G PG  G  G 
Sbjct: 338 PGDSGPDGHPGDVGERGPPGTDGDKGDPGRPGRSGPPGPDGDTGPKGERGSPGSPGIPGA 397

Query: 163 KGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGL------DGRDGLPGEPGLD----- 208
           KG+ G PG  G+PG++G+R   GPKG  G PG  G       +G+ GLPGE G D     
Sbjct: 398 KGNSGTPGVPGVPGEKGRRGDYGPKGSQGPPGTKGEKGENGPEGQRGLPGETGSDGAKGD 457

Query: 209 -GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G+PG  G  G  G+ G  G  G PG  G  GE G  GP+G+RG++G +
Sbjct: 458 VGLPGPRGPAGPSGEPGRLGSRGDPGDAGPRGEPGNVGPKGDRGRAGFS 506



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 84/161 (52%), Gaps = 35/161 (21%)

Query: 108 EYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------ 152
           +Y P G QGP    G+KGE G +G+ G+ GE G  GA G VG PGP+G            
Sbjct: 418 DYGPKGSQGPPGTKGEKGENGPEGQRGLPGETGSDGAKGDVGLPGPRGPAGPSGEPGRLG 477

Query: 153 ---IPGDEGKRG------PKGDMG-----YPGPQGIPGD---EGKRGPKG---DMGYPGR 192
               PGD G RG      PKGD G     Y G +G PGD   +GKRGP+G   D G  G 
Sbjct: 478 SRGDPGDAGPRGEPGNVGPKGDRGRAGFSYAGSRGEPGDRGDKGKRGPRGTRGDCGQKGE 537

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            GL G  G PGE G  G PG  G  G PG+DG PG +G PG
Sbjct: 538 PGLKGTPGQPGETGSQGEPGPRGPRGEPGRDGDPGPEGDPG 578



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 14/104 (13%)

Query: 112 PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           PG  GP G+ G +G KG+         G +GE G++G  G  GP G +G  G +G+ G K
Sbjct: 482 PGDAGPRGEPGNVGPKGDRGRAGFSYAGSRGEPGDRGDKGKRGPRGTRGDCGQKGEPGLK 541

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           G  G PG  G  G+ G RGP+G+   PGR   DG  G  G+PGL
Sbjct: 542 GTPGQPGETGSQGEPGPRGPRGE---PGR---DGDPGPEGDPGL 579


>gi|28422746|gb|AAH46970.1| Col9a1 protein [Mus musculus]
          Length = 629

 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/186 (45%), Positives = 103/186 (55%), Gaps = 24/186 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VKGERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G               + G++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGDQGPPGPQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMGYPGRIG 194
           A G  G PGPQGIPG   D+G+RGP G+ G  G +GI G  G     GPKGD G P   G
Sbjct: 485 ARGFDGEPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSPGPKGDTGLP---G 541

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           +DGRDG+PG PG  G  G+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G+ G
Sbjct: 542 VDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLG 601

Query: 255 INGVPG 260
            +G PG
Sbjct: 602 SSGKPG 607



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 87/186 (46%), Gaps = 30/186 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR--- 181
           G  G  G+ G RG KGA G +G PG QG  G+EG    +G++G  G QG PG +G R   
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGD---QGELGEVGDQGPPGPQGLRGIT 474

Query: 182 ---------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---- 222
                          G  G  G PG  G  G+ G PGE G +G  G  G  GIPG     
Sbjct: 475 GIVGDKGEKGARGFDGEPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSPGPK 534

Query: 223 --DGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
              GLP   G+DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  +    
Sbjct: 535 GDTGLPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAP 594

Query: 278 SETSQL 283
            +  QL
Sbjct: 595 GKPGQL 600



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/132 (40%), Positives = 67/132 (50%), Gaps = 15/132 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           E  P G+ G  G +G+ G  GE G +G+RG    +G PG  GP G  G+PG +G+     
Sbjct: 491 EPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSPGPKGDTGLPGVDGR----- 545

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                   GIPG  G +G  G  G PG +GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 546 -------DGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPG 598

Query: 225 LPGKDGIPGTNG 236
             G  G PG  G
Sbjct: 599 QLGSSGKPGQQG 610



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 45/100 (45%), Gaps = 6/100 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG  GP G  G  G  G  G+      KGE G+ G PG VG  G  G+PG  G +G  G+
Sbjct: 528 PGSPGPKGDTGLPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGE 587

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  G  G PG  G  G  G  G P R      DG P  P
Sbjct: 588 KGNTGAPGKPGQLGSSGKPGQQGPPWREWFPWSDGNPWSP 627


>gi|417407089|gb|JAA50171.1| Putative collagen alpha-1vii chain [Desmodus rotundus]
          Length = 2928

 Score =  112 bits (281), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 77/205 (37%), Positives = 101/205 (49%), Gaps = 55/205 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD---------EGKR 160
            P GL GP G +GE G KG+ G+ G +G+KG   V+ GPPGP+G  GD         +G++
Sbjct: 2486 PRGLVGPPGSRGERGEKGDPGMAGLKGDKGDSAVIMGPPGPRGAKGDMGERGLRGADGEK 2545

Query: 161  GPKGDMGYP------------------------GPQGIPGDE---------------GKR 181
            GP+GD G P                        GP+G PGD                G R
Sbjct: 2546 GPRGDFGSPGEKGSKGEPGDKGSAGLLGTRGLTGPKGEPGDAGIPGDPGPPGKDGVPGIR 2605

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTN 235
            G KG+MG+ G  GL G  G+ G  GLDG  G  G  G PG+ GL G+       G+PG  
Sbjct: 2606 GDKGEMGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGRKGDAGEPGMPGQA 2665

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G++G+ GP+G+RG  G +G  G
Sbjct: 2666 GAPGKEGLIGPKGDRGFDGQSGHKG 2690



 Score =  102 bits (255), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 67/165 (40%), Positives = 89/165 (53%), Gaps = 33/165 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGK---------- 159
            G  G  G +G+ G+ GE G KGE G+KG+ G++G     GP+G PGD G           
Sbjct: 2540 GADGEKGPRGDFGSPGEKGSKGEPGDKGSAGLLGTRGLTGPKGEPGDAGIPGDPGPPGKD 2599

Query: 160  -----RGPKGDMGYPGPQGIPGD---------EGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
                 RG KG+MG+ GP+G+ G+         +G++G KG+ G PGR GL GR G  GEP
Sbjct: 2600 GVPGIRGDKGEMGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGRKGDAGEP 2659

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G+       G  G PGK+GL G  G  G +G +G KG  G +G R
Sbjct: 2660 GMP------GQAGAPGKEGLIGPKGDRGFDGQSGHKGDQGEKGER 2698



 Score =  102 bits (253), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 68/171 (39%), Positives = 81/171 (47%), Gaps = 35/171 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG  G      P G PG  G++G  G+ G PG  
Sbjct: 2612 GFMGPRGLKGERGVKGACGLDGEKGDKGEAG------PPGRPGLAGRKGDAGEPGMPGQA 2665

Query: 173  GIPGDEGKRGPKGDMGYPGRIGL------------------------DGRDGLPGEPGLD 208
            G PG EG  GPKGD G+ G+ G                         DG  G PG  G  
Sbjct: 2666 GAPGKEGLIGPKGDRGFDGQSGHKGDQGEKGERGPPGIGGLPGPRGNDGASGPPGPSGSV 2725

Query: 209  GIPGRNGMDGIPGKDGLPGKD-----GIPGTNGTNGEKGMTGPRGNRGKSG 254
            G  G  G+ G  G+ G PG+      G PGT G  GE+G  GP G RG+ G
Sbjct: 2726 GPKGSEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGERG 2776



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 71/196 (36%), Positives = 85/196 (43%), Gaps = 44/196 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            G  GP G KGE G+ GE G KG+RG      ++G PG  G  G  G+PG+ G  GP+G  
Sbjct: 2103 GPSGPKGAKGEPGSDGERGPKGDRGGPGIKGDQGEPGKRGHDGGPGLPGERGVAGPEGKP 2162

Query: 167  GYPGPQGIPGDEGK------------------RGPKGDMGYPGRIGL------------- 195
            G  GP+G PG  G                   +GP G  G PG  G              
Sbjct: 2163 GLQGPRGSPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGPVG 2222

Query: 196  -------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
                    G  G  G PGL G  G  G  G PG+DG  GKDG  G  G  G  G+ GP G
Sbjct: 2223 LPGPPGSSGLVGPQGAPGLPGQVGETGKPGAPGRDGTNGKDGDRGAPGVPGSPGLPGPVG 2282

Query: 249  NRGKSGINGVPGTPAI 264
             +G+ G  G PG   +
Sbjct: 2283 PKGEPGPMGAPGQAVV 2298



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 70/163 (42%), Positives = 87/163 (53%), Gaps = 17/163 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMGYP 169
            P   G  G+KG++G  G  G  G +GE GAPG+   G PGP+G PG+   RGP G  G  
Sbjct: 1545 PAGAGVKGEKGDVGPAGPRGAAGAKGEPGAPGLALPGDPGPKGDPGN---RGPIGLTGRV 1601

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---------PGRNGMDGIP 220
            GP G  G  G++G  G  G PG IG  GRDG  GE G +G           G  G+ G P
Sbjct: 1602 GPPGDSGPPGEKGDPGRSGPPGLIGPRGRDGEVGEKGAEGPPGDPGLPGKAGERGLRGPP 1661

Query: 221  GKDGLPGK---DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G+    G PG +G NG  G  GP+G+RG+ G+ G PG
Sbjct: 1662 GARGPVGEKGDQGDPGEDGRNGSPGAPGPKGDRGEPGLPGTPG 1704



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 76/244 (31%), Positives = 94/244 (38%), Gaps = 85/244 (34%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG-----------------------APGV---- 144
            PG  G +G+ G  G +GE G KGE GE+G                        PG+    
Sbjct: 2043 PGSAGAVGEAGRPGERGERGEKGEHGEQGRDGPPGPPGPPGIPGTTVAVDKPGPGLPEKQ 2102

Query: 145  --VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
               GP G +G PG +G+RGPKGD G PG +G  G+ GKRG  G  G PG  G+ G +G P
Sbjct: 2103 GPSGPKGAKGEPGSDGERGPKGDRGGPGIKGDQGEPGKRGHDGGPGLPGERGVAGPEGKP 2162

Query: 203  GEPGLDGIP------------------------GRNGMDGIPGKD--------------- 223
            G  G  G P                        G +G+ G PG+                
Sbjct: 2163 GLQGPRGSPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGPVG 2222

Query: 224  -----------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                             GLPG+ G  G  G  G  G  G  G+RG  G+ G PG P    
Sbjct: 2223 LPGPPGSSGLVGPQGAPGLPGQVGETGKPGAPGRDGTNGKDGDRGAPGVPGSPGLPGPVG 2282

Query: 267  YKRE 270
             K E
Sbjct: 2283 PKGE 2286



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 72/190 (37%), Positives = 84/190 (44%), Gaps = 46/190 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++GAP         G VGP   PGP G PG    
Sbjct: 2239 PGLPGQVGETGKPGAPGRDGTNGKDGDRGAPGVPGSPGLPGPVGPKGEPGPMGAPGQAVV 2298

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG   + GD  G+ G KGD G PG  G  G  G PGEPG  G  G  G 
Sbjct: 2299 GPPGAKGEKGAPG--ALAGDLVGQPGAKGDRGLPGPRGEKGEAGRPGEPGDPGEDGLKGA 2356

Query: 217  DGIPGKDGLPGKD-----------------------------GIPGTNGTNGEKGMTGPR 247
             G+ G+ G PG                               G PG  G  GE G  GP 
Sbjct: 2357 PGLRGQKGDPGVGVQGPPGPIGPPGPKGDLGPSGPPGAPGIVGFPGQPGPRGETGQPGPS 2416

Query: 248  GNRGKSGING 257
            G RG +G  G
Sbjct: 2417 GERGLAGPPG 2426



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 69/172 (40%), Positives = 82/172 (47%), Gaps = 29/172 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEG 158
            PPG  GP G +G  GA GE G KG+R   G+PG+ GP GP G+ G              G
Sbjct: 1471 PPGDVGPKGDRGSPGAVGETGEKGQR---GSPGLAGPQGPPGVAGHPGAEGPEGPPGPTG 1527

Query: 159  KRGPKGDMGYPG-PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            +RG KG+ G PG P   P   G +G KGD+G  G  G  G  G PG PGL  +PG  G  
Sbjct: 1528 RRGEKGEPGRPGDPGEGPAGAGVKGEKGDVGPAGPRGAAGAKGEPGAPGL-ALPGDPGPK 1586

Query: 218  GIPGKDGLPGKDGI------------PGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG  G  G  G              G  G +G  G+ GPRG  G+ G  G
Sbjct: 1587 GDPGNRGPIGLTGRVGPPGDSGPPGEKGDPGRSGPPGLIGPRGRDGEVGEKG 1638



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 63/140 (45%), Positives = 74/140 (52%), Gaps = 13/140 (9%)

Query: 133  KGERG--EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            KGE+G  E GAPG+   PG  G PG+ G RGP GD+G  G +G PG  G+ G KG  G P
Sbjct: 1443 KGEKGDCEDGAPGL---PGQPGTPGERGLRGPPGDVGPKGDRGSPGAVGETGEKGQRGSP 1499

Query: 191  GRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  G  G+ G        G  G  GR G  G PG+ G PG+   P   G  GEKG  
Sbjct: 1500 GLAGPQGPPGVAGHPGAEGPEGPPGPTGRRGEKGEPGRPGDPGEG--PAGAGVKGEKGDV 1557

Query: 245  GPRGNRGKSGINGVPGTPAI 264
            GP G RG +G  G PG P +
Sbjct: 1558 GPAGPRGAAGAKGEPGAPGL 1577



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 81/247 (32%), Positives = 104/247 (42%), Gaps = 83/247 (33%)

Query: 112  PGLQGPIGQKGE---IGAKGE--MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PGL GP+G KGE   +GA G+  +G  G +GEKGAPG     +VG PG +G  G  G RG
Sbjct: 2275 PGLPGPVGPKGEPGPMGAPGQAVVGPPGAKGEKGAPGALAGDLVGQPGAKGDRGLPGPRG 2334

Query: 162  PKGDMGYPGPQGIPGDE------GKRGPKGD----------------------------- 186
             KG+ G PG  G PG++      G RG KGD                             
Sbjct: 2335 EKGEAGRPGEPGDPGEDGLKGAPGLRGQKGDPGVGVQGPPGPIGPPGPKGDLGPSGPPGA 2394

Query: 187  ---MGYPGRIGLDGRDGLP---GEPGLDGIPGRN-------------------------- 214
               +G+PG+ G  G  G P   GE GL G PGR                           
Sbjct: 2395 PGIVGFPGQPGPRGETGQPGPSGERGLAGPPGREGAPGPLGPPGPPGSAGAPGASGLKGD 2454

Query: 215  ------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                  G+ G  G+ G PG  G  G  G  G +G+ GP G+RG+ G  G PG   +   K
Sbjct: 2455 RGDPGVGLPGARGERGEPGVRGEDGHPGQEGPRGLVGPPGSRGERGEKGDPGMAGLKGDK 2514

Query: 269  RESCSLL 275
             +S  ++
Sbjct: 2515 GDSAVIM 2521



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 86/180 (47%), Gaps = 29/180 (16%)

Query: 113  GLQGPIGQKGEIGAKGEM---------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            GL GP G+ G+ G  G+          G++G++GE G  G  G  G +G+ G  G  G K
Sbjct: 2576 GLTGPKGEPGDAGIPGDPGPPGKDGVPGIRGDKGEMGFMGPRGLKGERGVKGACGLDGEK 2635

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK- 222
            GD G  GP G PG  G++G  G+ G PG+ G  G++GL G  G  G  G++G  G  G+ 
Sbjct: 2636 GDKGEAGPPGRPGLAGRKGDAGEPGMPGQAGAPGKEGLIGPKGDRGFDGQSGHKGDQGEK 2695

Query: 223  -----------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG--INGVPGTPA 263
                             DG  G  G  G+ G  G +G+ G +G RG  G  + G PG P 
Sbjct: 2696 GERGPPGIGGLPGPRGNDGASGPPGPSGSVGPKGSEGLQGQKGERGPPGESVVGAPGAPG 2755



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 74/232 (31%), Positives = 90/232 (38%), Gaps = 81/232 (34%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGIPGDEGKRGPKGDM 166
            G +GP G +G  G KG+ G  G+RG  G PG      V GP G  G+ G  G  GP G  
Sbjct: 2118 GERGPKGDRGGPGIKGDQGEPGKRGHDGGPGLPGERGVAGPEGKPGLQGPRGSPGPVGSH 2177

Query: 167  ------------------------GYP-----------------------------GPQG 173
                                    G P                             GPQG
Sbjct: 2178 GDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGPVGLPGPPGSSGLVGPQG 2237

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGK-- 228
             PG  G+ G  G  G PGR G +G+D   G PG PG  G+PG  G  G PG  G PG+  
Sbjct: 2238 APGLPGQVGETGKPGAPGRDGTNGKDGDRGAPGVPGSPGLPGPVGPKGEPGPMGAPGQAV 2297

Query: 229  ---------DGIPGT--------NGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                      G PG          G  G++G+ GPRG +G++G  G PG P 
Sbjct: 2298 VGPPGAKGEKGAPGALAGDLVGQPGAKGDRGLPGPRGEKGEAGRPGEPGDPG 2349



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 68/167 (40%), Positives = 80/167 (47%), Gaps = 31/167 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------------GPP 148
            G  GP G +G+ G+KGE G+ GERG +G PG V                           
Sbjct: 1905 GSPGPKGDRGDSGSKGEQGLPGERGLRGDPGSVPNVERLLENIGIKTSALREIVETWDES 1964

Query: 149  GPQGIPGDEGKRGPKGD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD----GRDGL 201
                +P  E  RGPKGD    G PG +G  G  G RGPKGD G PG  G      G  G 
Sbjct: 1965 SGSFLPVPERWRGPKGDPGERGPPGKEGPVGFSGDRGPKGDRGDPGPQGPPGLALGERGS 2024

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG PGL G PG+ G+ G+PG  G  G+ G PG  G  GEKG  G +G
Sbjct: 2025 PGLPGLAGEPGKPGIPGLPGSAGAVGEAGRPGERGERGEKGEHGEQG 2071



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 84/244 (34%), Positives = 100/244 (40%), Gaps = 94/244 (38%)

Query: 111  PPGLQGPIGQKGEIGAKG------------EMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            PPGL GP G+ GE+G KG            + G +G RG  GA G VG  G QG PG++G
Sbjct: 1621 PPGLIGPRGRDGEVGEKGAEGPPGDPGLPGKAGERGLRGPPGARGPVGEKGDQGDPGEDG 1680

Query: 159  KRG------PKGDMGYPG----------------PQGIPGDEGK---------------- 180
            + G      PKGD G PG                 +G PGD G+                
Sbjct: 1681 RNGSPGAPGPKGDRGEPGLPGTPGRLVDSGLGAREKGEPGDRGQEGPRGPKGDPGPPGAP 1740

Query: 181  --------------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMD 217
                                RGP G+ G  G  GLDGR GL G+PG  G P   G  G  
Sbjct: 1741 GERGIDGLRGPPGPQGDPGARGPAGEKGDRGPPGLDGRSGLDGKPGAPGPPGQHGTAGKA 1800

Query: 218  GIPGKDGLP---------------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G PG+DGLP                     G+DG PG +G NGE G  G  G +G+ G  
Sbjct: 1801 GDPGRDGLPGLRGEQGPPGPTGPPGAPGKAGEDGKPGPSGKNGEPGDPGEDGRKGERGDA 1860

Query: 257  GVPG 260
            G PG
Sbjct: 1861 GTPG 1864



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 67/181 (37%), Positives = 84/181 (46%), Gaps = 38/181 (20%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPGPQGIPGDE 157
            E  PPG +GP+G  G+ G KG+ G            GERG  G PG+ G PG  GIPG  
Sbjct: 1984 ERGPPGKEGPVGFSGDRGPKGDRGDPGPQGPPGLALGERGSPGLPGLAGEPGKPGIPGLP 2043

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-------------- 203
            G  G  G+ G PG +G  G++G+ G +G            RDG PG              
Sbjct: 2044 GSAGAVGEAGRPGERGERGEKGEHGEQG------------RDGPPGPPGPPGIPGTTVAV 2091

Query: 204  -EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
             +PG  G+P + G  G  G  G PG DG  G  G  G  G+ G +G  GK G +G PG P
Sbjct: 2092 DKPG-PGLPEKQGPSGPKGAKGEPGSDGERGPKGDRGGPGIKGDQGEPGKRGHDGGPGLP 2150

Query: 263  A 263
             
Sbjct: 2151 G 2151



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 60/144 (41%), Positives = 73/144 (50%), Gaps = 13/144 (9%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G +G +G  G+ G+ GE G PG    PG  G  G +G RG     G PG  G+PG  G +
Sbjct: 2231 GLVGPQGAPGLPGQVGETGKPGA---PGRDGTNGKDGDRGAP---GVPGSPGLPGPVGPK 2284

Query: 182  GPKGDMGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
            G  G MG PG+  +G  G  G  G PG     L G PG  G  G+PG  G  G+ G PG 
Sbjct: 2285 GEPGPMGAPGQAVVGPPGAKGEKGAPGALAGDLVGQPGAKGDRGLPGPRGEKGEAGRPGE 2344

Query: 235  NGTNGEKGMTGPRGNRGKSGINGV 258
             G  GE G+ G  G RG+ G  GV
Sbjct: 2345 PGDPGEDGLKGAPGLRGQKGDPGV 2368



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 74/205 (36%), Positives = 86/205 (41%), Gaps = 64/205 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------------ 154
            GL GP G+KGE G  GE G  GE G KGAPG+ G  G  G+                   
Sbjct: 2328 GLPGPRGEKGEAGRPGEPGDPGEDGLKGAPGLRGQKGDPGVGVQGPPGPIGPPGPKGDLG 2387

Query: 155  -----------GDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
                       G  G+ GP+G+ G PGP G  G  G  G                     
Sbjct: 2388 PSGPPGAPGIVGFPGQPGPRGETGQPGPSGERGLAGPPGREGAPGPLGPPGPPGSAGAPG 2447

Query: 184  ----KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
                KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG+ G  G
Sbjct: 2448 ASGLKGDRGDPGV-------GLPGARGERGEPGVRGEDGHPGQEGPRGLVGPPGSRGERG 2500

Query: 240  EK---GMTGPRGNRGKSG-INGVPG 260
            EK   GM G +G++G S  I G PG
Sbjct: 2501 EKGDPGMAGLKGDKGDSAVIMGPPG 2525



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 77/238 (32%), Positives = 87/238 (36%), Gaps = 90/238 (37%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------------------- 150
            G  GP G+ GE G  GE G KGERG+ G PG  G  GP                      
Sbjct: 1834 GKPGPSGKNGEPGDPGEDGRKGERGDAGTPGREGLDGPKGDRGVPGSPGLPGPPGLPGQV 1893

Query: 151  ----QGIPGDEGKRGPKGDMG---YPGPQGIPGDEGK----------------------- 180
                QG PG  G  GPKGD G     G QG+PG+ G                        
Sbjct: 1894 GPPGQGFPGITGSPGPKGDRGDSGSKGEQGLPGERGLRGDPGSVPNVERLLENIGIKTSA 1953

Query: 181  ----------------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDG--------- 209
                                  RGPKGD G  G  G +G  G  G+ G  G         
Sbjct: 1954 LREIVETWDESSGSFLPVPERWRGPKGDPGERGPPGKEGPVGFSGDRGPKGDRGDPGPQG 2013

Query: 210  ----IPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                  G  G  G+PG  G PGK GI   PG+ G  GE G  G RG RG+ G +G  G
Sbjct: 2014 PPGLALGERGSPGLPGLAGEPGKPGIPGLPGSAGAVGEAGRPGERGERGEKGEHGEQG 2071



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 41/178 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIP----------- 154
            +GP G+KG+ G  G  G  G           G+ G  G  G PG  G+P           
Sbjct: 1761 RGPAGEKGDRGPPGLDGRSGLDGKPGAPGPPGQHGTAGKAGDPGRDGLPGLRGEQGPPGP 1820

Query: 155  ----------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG---- 200
                      G++GK GP G  G PG    PG++G++G +GD G PGR GLDG  G    
Sbjct: 1821 TGPPGAPGKAGEDGKPGPSGKNGEPGD---PGEDGRKGERGDAGTPGREGLDGPKGDRGV 1877

Query: 201  ----LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                    P            G PG  G PG  G  G +G+ GE+G+ G RG RG  G
Sbjct: 1878 PGSPGLPGPPGLPGQVGPPGQGFPGITGSPGPKGDRGDSGSKGEQGLPGERGLRGDPG 1935



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/169 (34%), Positives = 67/169 (39%), Gaps = 50/169 (29%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDEGKRG 161
            P GL+G  G KG  G  GE G KGE G  G PG+ G          PG  G PG EG  G
Sbjct: 2616 PRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGRKGDAGEPGMPGQAGAPGKEGLIG 2675

Query: 162  PKGDMGYPGPQGIPGDEGKRG------------------------------PKGDMGYPG 191
            PKGD G+ G  G  GD+G++G                              PKG  G  G
Sbjct: 2676 PKGDRGFDGQSGHKGDQGEKGERGPPGIGGLPGPRGNDGASGPPGPSGSVGPKGSEGLQG 2735

Query: 192  R-----------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            +           +G  G  G PGE G  G PG  G  G  G+  L   D
Sbjct: 2736 QKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGERGEAALTEDD 2784



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 59/195 (30%), Positives = 69/195 (35%), Gaps = 74/195 (37%)

Query: 133  KGERGEKGAPGVVGPPG-PQGIPGDEG-----------------------KRGPKGDMGY 168
            +GERGE+G  G  G PG P  I G EG                         GP+G  G 
Sbjct: 1333 RGERGERGPQGPKGEPGEPGAITGGEGPGLPGKKGDPGPPGPPGPHGPLGDPGPRGSPGL 1392

Query: 169  PGPQGIPGDEGKRGP------------------------------------KGDMGYPGR 192
            PG   + GD+G RG                                     KG+ G    
Sbjct: 1393 PG-VALKGDKGDRGERGPPGPGDGGTAPGEPGLPGLPGSPGPPGPVGPPGTKGEKG---- 1447

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
               D  DG PG PG  G PG  G+ G PG  G  G  G PG  G  GEKG       RG 
Sbjct: 1448 ---DCEDGAPGLPGQPGTPGERGLRGPPGDVGPKGDRGSPGAVGETGEKG------QRGS 1498

Query: 253  SGINGVPGTPAICAY 267
             G+ G  G P +  +
Sbjct: 1499 PGLAGPQGPPGVAGH 1513


>gi|390475145|ref|XP_003734907.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(VII) chain-like
            [Callithrix jacchus]
          Length = 2993

 Score =  112 bits (279), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 64/146 (43%), Positives = 84/146 (57%), Gaps = 6/146 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
            PG +G  G+ G+ G  G  G++G  G +G PG  G PG  G PG  G    RG KGD+G+
Sbjct: 2557 PGDKGSKGEPGDKGFSGSPGLRGLPGPQGQPGAAGIPGDPGSPGKAGVPGIRGEKGDIGF 2616

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             GP+G+   +G+RG KG  G  G  G  G  G PG PGL G  G  G  G+PG+ G PGK
Sbjct: 2617 MGPRGL---KGERGVKGACGLDGEKGDKGEVGPPGRPGLAGHKGEMGEPGVPGQSGSPGK 2673

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSG 254
            +G+ G  G  G  G  GP+G++G+ G
Sbjct: 2674 EGLIGPKGDRGFDGQPGPKGDQGEKG 2699



 Score =  104 bits (260), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 97/212 (45%), Gaps = 67/212 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                    PG   
Sbjct: 1656 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGPSGPKGDRGEPGPPGPPGRLVDIGPGARE 1715

Query: 151  QGIPGDEGK------------------------RGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            +G PGD G+                        RGP G  G PG +G  G++G RGP G 
Sbjct: 1716 KGEPGDRGQEGPRGPKGDPGPPGPPGERGVDGLRGPSGPQGDPGVRGPAGEKGDRGPPG- 1774

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGL------------PGK 228
                GR GLDG+ G PG PGL+G       PGR+G+ G+ G+ G             PG+
Sbjct: 1775 --LDGRSGLDGKPGAPGSPGLNGATGKAGDPGRDGLPGLRGEQGPPGPSGPPGLLGKPGE 1832

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            DG PG NG NGE G  G  G +G+ G +G PG
Sbjct: 1833 DGKPGLNGKNGEPGDPGEDGRKGEKGESGAPG 1864



 Score =  102 bits (253), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 74/155 (47%), Positives = 85/155 (54%), Gaps = 3/155 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG--ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            PGLQG  G +G +G  GE G KG  E G  G PG  G PG QG  G  G  GPKGD G+P
Sbjct: 1424 PGLQGSPGPQGPVGPPGEKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGTTGPKGDRGFP 1483

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP G  G++G+RGP G  G  G  G+ GR G  G  G  G  GR G  G PG+ G P   
Sbjct: 1484 GPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAEGPEGPPGPTGRQGEKGEPGRPGDPAVV 1543

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G P   G  GEKG  GP G RG +G+ G  G P +
Sbjct: 1544 G-PAVAGPKGEKGDAGPAGPRGATGVQGERGPPGL 1577



 Score =  100 bits (250), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 70/201 (34%), Positives = 89/201 (44%), Gaps = 49/201 (24%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG----------------------------APGV 144
            GL GP G++GE G +GE G  G+ G +G                            +  +
Sbjct: 2464 GLPGPRGERGEPGVRGEDGYPGQEGPRGLMGPPGGRGERGEKGDAGTTGLKGDKGDSAVI 2523

Query: 145  VGPPGPQGIPGDEGKRGP------------------KGDMGYPGPQGIPGDEGKRGPKGD 186
            +GPPGP+G  GD G+RGP                  KG  G PG +G  G  G RG  G 
Sbjct: 2524 LGPPGPRGAKGDTGERGPRGLDXTKDLRENNRDPGDKGSKGEPGDKGFSGSPGLRGLPGP 2583

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GM 243
             G PG  G+ G  G PG+ G+ GI G  G  G  G  GL G+ G+ G  G +GEK   G 
Sbjct: 2584 QGQPGAAGIPGDPGSPGKAGVPGIRGEKGDIGFMGPRGLKGERGVKGACGLDGEKGDKGE 2643

Query: 244  TGPRGNRGKSGINGVPGTPAI 264
             GP G  G +G  G  G P +
Sbjct: 2644 VGPPGRPGLAGHKGEMGEPGV 2664



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 72/196 (36%), Positives = 93/196 (47%), Gaps = 30/196 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL+GP G +G+ G +G  G KG+RG  G  G  G  G  G PG  G  G  G  G PG  
Sbjct: 1747 GLRGPSGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAPGSPGLNGATGKAGDPGRD 1806

Query: 173  GIPGDEGKRGPKGDMGYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G+PG  G++GP G  G PG   + G DG+ GL G+ G  G PG +G  G  G+ G PG++
Sbjct: 1807 GLPGLRGEQGPPGPSGPPGLLGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGESGAPGRE 1866

Query: 230  GIPGTNGTNGEKGM--------------------------TGPRGNRGKSGINGVPGTPA 263
            G  G  G  G  G+                           GP+G+RG++G  G  G P 
Sbjct: 1867 GHDGPKGERGPPGILGPQGPPGLPGPVGPPGQGFPGVPGSAGPKGDRGETGSKGEQGLPG 1926

Query: 264  ICAYKRESCSLLPNSE 279
                + E  S LPN E
Sbjct: 1927 ERGLRGEPGS-LPNVE 1941



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 74/237 (31%), Positives = 92/237 (38%), Gaps = 88/237 (37%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G+ G  G +GE G KGERGE+G                           PG  
Sbjct: 2043 PGQAGGVGEAGRPGERGERGEKGERGEQGRDGSPGLPGTPGPPGPPGPKVAVDGPGPGAS 2102

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG  G RGPKGDMG PG +G  G+ G RG  G+ G PG  G+ G +
Sbjct: 2103 GEQGPPGLKGAKGEPGSYGDRGPKGDMGMPGVKGDRGEPGLRGQDGNPGLPGERGVAGPE 2162

Query: 200  GLPGEPGL------------------------DGIPGRNGMDGIPGKD------------ 223
            G PG  GL                         G  G +G+ G PG+             
Sbjct: 2163 GKPGLQGLRGHPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGQGLPGPTG 2222

Query: 224  --------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                                GLPG+ G  G  G  G  G +G  G+RG  G+ G+PG
Sbjct: 2223 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGTSGKDGDRGSPGVPGLPG 2279



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 74/147 (50%), Gaps = 17/147 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRG-------- 161
            P + GP G+KG+ G  G  G  G +GE+G PG+V  G PGP+G PGD G  G        
Sbjct: 1545 PAVAGPKGEKGDAGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPTGLTGRAGPP 1604

Query: 162  -------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                    KGD G PGP G  G  G+ G  G+ G  G  G  G  G  GE GL G PG  
Sbjct: 1605 GDSGPPGEKGDPGRPGPLGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1664

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G  G  G  G PG+DG  G+ G +G K
Sbjct: 1665 GPVGEKGDQGDPGEDGRNGSPGPSGPK 1691



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 77/217 (35%), Positives = 87/217 (40%), Gaps = 67/217 (30%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGER---------------------------------G 137
            PPG  GP G +G  G  GE G KGER                                 G
Sbjct: 1470 PPGTTGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAEGPEGPPGPTGRQG 1529

Query: 138  EKGAPG------VVGP--PGPQGIPGDEGKRGPKGDMGYPGPQGIPG--DEGKRGPKGDM 187
            EKG PG      VVGP   GP+G  GD G  GP+G  G  G +G PG    G  GPKGD 
Sbjct: 1530 EKGEPGRPGDPAVVGPAVAGPKGEKGDAGPAGPRGATGVQGERGPPGLVLPGDPGPKGDP 1589

Query: 188  GYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMDGIPGKDG----------- 224
            G  G  GL GR             G PG PG  G  G  G DG  G+ G           
Sbjct: 1590 GDRGPTGLTGRAGPPGDSGPPGEKGDPGRPGPLGPVGPRGRDGEVGEKGDEGPPGDPGLP 1649

Query: 225  -LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G+ G+ G  G  G  G  G +G+ G+ G NG PG
Sbjct: 1650 GKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPG 1686



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 97/261 (37%), Gaps = 111/261 (42%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---------------------GIPGD 156
            +G  G+ G +GEMG  G  GE+G   + GPPG +                     G+ GD
Sbjct: 2401 VGFPGQTGPRGEMGQPGPSGERG---LAGPPGREGVPGPLGPPGPPGSVGPAGASGLKGD 2457

Query: 157  E--------------------------GKRGPKGDM------------------------ 166
            +                          G+ GP+G M                        
Sbjct: 2458 KGDPGAGLPGPRGERGEPGVRGEDGYPGQEGPRGLMGPPGGRGERGEKGDAGTTGLKGDK 2517

Query: 167  -------GYPGPQGIPGDEGKRGPKG------------DMGYPGRIGLDGRDGLPGEPGL 207
                   G PGP+G  GD G+RGP+G            D G  G  G  G  G  G PGL
Sbjct: 2518 GDSAVILGPPGPRGAKGDTGERGPRGLDXTKDLRENNRDPGDKGSKGEPGDKGFSGSPGL 2577

Query: 208  DGIP---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV------ 258
             G+P   G+ G  GIPG  G PGK G+PG  G  G+ G  GPRG +G+ G+ G       
Sbjct: 2578 RGLPGPQGQPGAAGIPGDPGSPGKAGVPGIRGEKGDIGFMGPRGLKGERGVKGACGLDGE 2637

Query: 259  ---------PGTPAICAYKRE 270
                     PG P +  +K E
Sbjct: 2638 KGDKGEVGPPGRPGLAGHKGE 2658



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 102/255 (40%), Gaps = 99/255 (38%)

Query: 105  STKEYCPPGLQGPIGQK---GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            ++ E  PPGL+G  G+    G+ G KG+MG+ G +G++G PG+ G  G  G+PG+ G  G
Sbjct: 2101 ASGEQGPPGLKGAKGEPGSYGDRGPKGDMGMPGVKGDRGEPGLRGQDGNPGLPGERGVAG 2160

Query: 162  PKGDMGY------------------------------PGPQGIPGDEGK----------- 180
            P+G  G                                GP G+ G+ G+           
Sbjct: 2161 PEGKPGLQGLRGHPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGQGLPGP 2220

Query: 181  ---------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                            GP+G  G PG++G  G+   PG PG DG  G++G  G PG  GL
Sbjct: 2221 TGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGK---PGAPGRDGTSGKDGDRGSPGVPGL 2277

Query: 226  PGKD--------------------GIPGTN-----------------GTNGEKGMTGPRG 248
            PG                      G+PG                   G  G++G+ GPRG
Sbjct: 2278 PGLPGPVGPKGEPGPPGAPGQAVVGLPGAKGEKGAPGDLAGDLVGEPGAKGDRGLPGPRG 2337

Query: 249  NRGKSGINGVPGTPA 263
             +G++G  G PG P 
Sbjct: 2338 EKGEAGRAGEPGDPG 2352



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 64/178 (35%), Positives = 79/178 (44%), Gaps = 35/178 (19%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG++GP G+KG+ G     G  G+ G+ G  G+PG+ G  G  G PG +G  G +G+ G 
Sbjct: 1758 PGVRGPAGEKGDRGPPGLDGRSGLDGKPGAPGSPGLNGATGKAGDPGRDGLPGLRGEQGP 1817

Query: 169  ------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
                        PG  G PG  GK G  GD G  GR G  G  G PG  G DG  G  G 
Sbjct: 1818 PGPSGPPGLLGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGESGAPGREGHDGPKGERGP 1877

Query: 217  DGIPGKDGL--------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             GI G  G                      G  G  G  G+ GE+G+ G RG RG+ G
Sbjct: 1878 PGILGPQGPPGLPGPVGPPGQGFPGVPGSAGPKGDRGETGSKGEQGLPGERGLRGEPG 1935



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 65/172 (37%), Positives = 79/172 (45%), Gaps = 37/172 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG    VGPPG    PG  G +G  G+ G PG  
Sbjct: 2615 GFMGPRGLKGERGVKGACGLDGEKGDKGE---VGPPGR---PGLAGHKGEMGEPGVPGQS 2668

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------------- 204
            G PG EG  GPKGD G+ G+ G  G  G  GE                            
Sbjct: 2669 GSPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPPGIGGFPGPRGNDGSAGPPGPPGNV 2728

Query: 205  --PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
               G +G+ G+ G  G PG+  +      PG  G  GE+G  GP G RG+ G
Sbjct: 2729 GPRGPEGLQGQKGERGPPGERVVGAPGA-PGAPGERGEQGRPGPAGTRGEKG 2779



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 80/194 (41%), Gaps = 54/194 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ-------------------- 151
            PGL G +G+ G+ GA G  G  G+ G++G+PGV G PG                      
Sbjct: 2242 PGLPGQVGETGKPGAPGRDGTSGKDGDRGSPGVPGLPGLPGPVGPKGEPGPPGAPGQAVV 2301

Query: 152  GIPGDEGKRGPKGDMG--YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            G+PG +G++G  GD+     G  G  GD G  GP+G+ G  GR       G PG+PG DG
Sbjct: 2302 GLPGAKGEKGAPGDLAGDLVGEPGAKGDRGLPGPRGEKGEAGRA------GEPGDPGEDG 2355

Query: 210  IPGRNGMDGIPGKDGLPGKD--------------------------GIPGTNGTNGEKGM 243
              G  G  G  G  G+                              G PG  G  GE G 
Sbjct: 2356 QKGAAGPKGYKGDPGVGVPGSPGPPGPPGLKGDLGPPGSPGAPGVVGFPGQTGPRGEMGQ 2415

Query: 244  TGPRGNRGKSGING 257
             GP G RG +G  G
Sbjct: 2416 PGPSGERGLAGPPG 2429



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 69/223 (30%), Positives = 85/223 (38%), Gaps = 85/223 (38%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---------------- 165
            GE GAKG+ G+ G RGEKG  G  G PG  G  G +G  GPKG                 
Sbjct: 2322 GEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAAGPKGYKGDPGVGVPGSPGPPG 2381

Query: 166  -------------------MGYPGPQGIPGDEGKRGPKGDMGY---PGR----------- 192
                               +G+PG  G  G+ G+ GP G+ G    PGR           
Sbjct: 2382 PPGLKGDLGPPGSPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPG 2441

Query: 193  ----------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI----------- 231
                       GL G  G PG  GL G  G  G  G+ G+DG PG++G            
Sbjct: 2442 PPGSVGPAGASGLKGDKGDPG-AGLPGPRGERGEPGVRGEDGYPGQEGPRGLMGPPGGRG 2500

Query: 232  -------PGTNGTNGEKGMT-------GPRGNRGKSGINGVPG 260
                    GT G  G+KG +       GPRG +G +G  G  G
Sbjct: 2501 ERGEKGDAGTTGLKGDKGDSAVILGPPGPRGAKGDTGERGPRG 2543



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 69/222 (31%), Positives = 79/222 (35%), Gaps = 81/222 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--------------- 157
            G  G  G+ G  G  G  G  G  G KG+PG+   PGP+G  G++               
Sbjct: 1297 GFPGADGRPGSPGQPGTPGNPGAPGLKGSPGL---PGPRGELGEQGPRGPKGEPGPPGQV 1353

Query: 158  -GKRGPKGDMGYPGP--------------------------------QGIPGDEGKRGPK 184
             G +GP    G PG                                 +G  GD G+RGP 
Sbjct: 1354 TGGQGP----GLPGRKGDPGPSGPPGPLGPQGDPGPRGPPGLPGTAVKGDKGDRGERGPP 1409

Query: 185  G------DMGYPGRIGL--------------------DGRDGLPGEPGLDGIPGRNGMDG 218
            G        G PG  GL                    D  DG PG PG  G PG  G  G
Sbjct: 1410 GLGEGGIAPGEPGLPGLQGSPGPQGPVGPPGEKGEKGDSEDGAPGLPGQPGSPGEQGPRG 1469

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG  G  G  G PG  G  GEKG  GP G  G  G+ GV G
Sbjct: 1470 PPGTTGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAG 1511



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 94/255 (36%), Gaps = 106/255 (41%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1248 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSTIAKGERGFPGADGR 1304

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----------------GP----- 183
             G PG  G PG+ G  G KG  G PGP+G  G++G R                GP     
Sbjct: 1305 PGSPGQPGTPGNPGAPGLKGSPGLPGPRGELGEQGPRGPKGEPGPPGQVTGGQGPGLPGR 1364

Query: 184  --------------------------------KGDMGYPGRIGLD--GRDGL-PGEPGLD 208
                                            KGD G  G  G    G  G+ PGEPGL 
Sbjct: 1365 KGDPGPSGPPGPLGPQGDPGPRGPPGLPGTAVKGDKGDRGERGPPGLGEGGIAPGEPGLP 1424

Query: 209  GIP--------------------GRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTG 245
            G+                       +G  G+PG+ G PG+    G PGT G  G++G  G
Sbjct: 1425 GLQGSPGPQGPVGPPGEKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGTTGPKGDRGFPG 1484

Query: 246  PRGNRGKSGINGVPG 260
            P G  G+ G  G PG
Sbjct: 1485 PLGEAGEKGERGPPG 1499



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 56/179 (31%), Positives = 70/179 (39%), Gaps = 66/179 (36%)

Query: 115  QGPIGQKGEIGAKGEM-------------------------------GVKGERGEKGAPG 143
            +GPIG  GE G KG+                                G+ G  G+ G  G
Sbjct: 1991 EGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGLPGQAGGVG 2050

Query: 144  VVGPPGPQGIPGDEGKRGPK--------------------------------GDMGYP-- 169
              G PG +G  G++G+RG +                                G+ G P  
Sbjct: 2051 EAGRPGERGERGEKGERGEQGRDGSPGLPGTPGPPGPPGPKVAVDGPGPGASGEQGPPGL 2110

Query: 170  -GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G +G PG  G RGPKGDMG PG  G  G  GL G+ G  G+PG  G+ G  GK GL G
Sbjct: 2111 KGAKGEPGSYGDRGPKGDMGMPGVKGDRGEPGLRGQDGNPGLPGERGVAGPEGKPGLQG 2169



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 58/158 (36%), Positives = 69/158 (43%), Gaps = 44/158 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
            GL G  G KGE+G  G  G+ G +GE G PGV   PG  G PG EG  GPKGD G+   P
Sbjct: 2633 GLDGEKGDKGEVGPPGRPGLAGHKGEMGEPGV---PGQSGSPGKEGLIGPKGDRGFDGQP 2689

Query: 170  GPQGIPGDEGKR------------------------------------GPKGDMGYPGR- 192
            GP+G  G++G+R                                    G KG+ G PG  
Sbjct: 2690 GPKGDQGEKGERGPPGIGGFPGPRGNDGSAGPPGPPGNVGPRGPEGLQGQKGERGPPGER 2749

Query: 193  -IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
             +G  G  G PGE G  G PG  G  G  G+  L   D
Sbjct: 2750 VVGAPGAPGAPGERGEQGRPGPAGTRGEKGEAALTEDD 2787



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 55/169 (32%), Positives = 68/169 (40%), Gaps = 49/169 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER---------------GEKGAPGVVGPPGPQGIPGD 156
            PGL G  G+ G+ G  G  G++GE+               GE G PG+    G  G PGD
Sbjct: 1791 PGLNGATGKAGDPGRDGLPGLRGEQGPPGPSGPPGLLGKPGEDGKPGL---NGKNGEPGD 1847

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG------------------------- 191
             G+ G KG+    G  G PG EG  GPKG+ G PG                         
Sbjct: 1848 PGEDGRKGE---KGESGAPGREGHDGPKGERGPPGILGPQGPPGLPGPVGPPGQGFPGVP 1904

Query: 192  -RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
               G  G  G  G  G  G+PG  G+ G PG   LP  + +  T G N 
Sbjct: 1905 GSAGPKGDRGETGSKGEQGLPGERGLRGEPGS--LPNVERLLETAGINA 1951



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 89/248 (35%), Gaps = 102/248 (41%)

Query: 116  GPIGQKGEIGAKGEMGVKGER---GEKGA-PGV--------------------------- 144
            GP G +GE G+KGE G+ GER   GE G+ P V                           
Sbjct: 1908 GPKGDRGETGSKGEQGLPGERGLRGEPGSLPNVERLLETAGINASALREIVETWDESSGS 1967

Query: 145  --------------------VGPPGPQGIPGDEGKRGPKGDMGYPGPQ------------ 172
                                 G  GP G PG+   RG KGD G PGPQ            
Sbjct: 1968 FLPVPEGRRGPKGGPGERGPPGKEGPIGFPGE---RGLKGDRGDPGPQGPPGLALGERGP 2024

Query: 173  -------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI--------- 210
                         GIPG  G+ G  G+ G PG  G  G  G  GE G DG          
Sbjct: 2025 PGPPGLAGEPGKPGIPGLPGQAGGVGEAGRPGERGERGEKGERGEQGRDGSPGLPGTPGP 2084

Query: 211  --------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                          PG +G  G PG  G  G+ G  G  G  G+ GM G +G+RG+ G+ 
Sbjct: 2085 PGPPGPKVAVDGPGPGASGEQGPPGLKGAKGEPGSYGDRGPKGDMGMPGVKGDRGEPGLR 2144

Query: 257  GVPGTPAI 264
            G  G P +
Sbjct: 2145 GQDGNPGL 2152


>gi|13235588|emb|CAC33777.1| SclB protein [Streptococcus pyogenes]
          Length = 399

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/189 (43%), Positives = 108/189 (57%), Gaps = 21/189 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGP---------IGQKGEIGAKGEMGVKGERGEKGAPGVV- 145
           L  ++G         P GLQGP          G++G++G +G  G +G RGE+GAPG   
Sbjct: 112 LHHLKGEKGEPGPAGPRGLQGPQGPRGDKGETGEQGQVGPRGLQGPQGPRGEQGAPGAKG 171

Query: 146 --GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDG 200
             G  GPQG  G +G+ G KG++G  GPQG  GD+G++   GP G  G  G+ GL G+DG
Sbjct: 172 DRGETGPQGPAGKDGEAGAKGEVGPQGPQGPRGDKGEQGPVGPAGKDGQNGKDGLPGKDG 231

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI----- 255
             G+ G DG+PG++G DG  GKDGLPGKDG  G +G +G  G  G  G  GK G+     
Sbjct: 232 KDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGQDGLPGKDGKDGQDGKDGLPGKDG 291

Query: 256 -NGVPGTPA 263
            +G PG PA
Sbjct: 292 KDGQPGKPA 300



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 94/163 (57%), Gaps = 15/163 (9%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---------EKGAPGVVGPPGP 150
           +G      +  P GLQGP G +GE GA G  G +GE G         E GA G VGP GP
Sbjct: 140 KGETGEQGQVGPRGLQGPQGPRGEQGAPGAKGDRGETGPQGPAGKDGEAGAKGEVGPQGP 199

Query: 151 QGIPGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           QG  GD+G++GP    G  G  G  G+PG +GK G  G  G PG+ G DG++G  G PG 
Sbjct: 200 QGPRGDKGEQGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGK 259

Query: 208 DGIPGRNGMDGIPGKDG---LPGKDGIPGTNGTNGEKGMTGPR 247
           DG  G++G DG+PGKDG     GKDG+PG +G +G+ G   P+
Sbjct: 260 DGKDGQDGQDGLPGKDGKDGQDGKDGLPGKDGKDGQPGKPAPK 302


>gi|281604200|ref|NP_001094312.1| collagen alpha-1(IX) chain [Rattus norvegicus]
          Length = 934

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 105/189 (55%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 438 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 497

Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G  G PGPQG+PG   D+G+RGP      KGD G  G +GIPG  G   PKGD G PG
Sbjct: 498 ARGFDGDPGPQGVPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSPG---PKGDTGLPG 554

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              +DGRDG+PG PG  G  G+ G  G  G  GLPG  GIPG  G  GEKG TGP G  G
Sbjct: 555 ---VDGRDGIPGMPGTKGEAGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGPPGKPG 611

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 612 QLGSSGKPG 620



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/184 (45%), Positives = 103/184 (55%), Gaps = 21/184 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 439 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 498

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQG+PG   D+G+RGP G+ G  G  G+ G  G+PG PG        G  G+
Sbjct: 499 RGFDGDPGPQGVPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSPGP------KGDTGL 552

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
           PG DG   +DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  +  P  +
Sbjct: 553 PGVDG---RDGIPGMPGTKGEAGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGPPGK 609

Query: 280 TSQL 283
             QL
Sbjct: 610 PGQL 613



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 81/159 (50%), Gaps = 18/159 (11%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP- 169
           P G+ G  G +G+ G  GE G KG+RG +G+ G+ G P            GPKGD G P 
Sbjct: 507 PQGVPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSP------------GPKGDTGLPG 554

Query: 170 --GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G  G
Sbjct: 555 VDGRDGIPGMPGTKGEAGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGPPGKPGQLG 614

Query: 228 KDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G PG  G  GE G  GPR   G+RG  G  G PG P 
Sbjct: 615 SSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPG 653



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 82/175 (46%), Gaps = 21/175 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E   PG  G  G +G  G  G  G KG  GEKG  G  G PG  G  G  
Sbjct: 560 GIPGMPGTKGEAGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGPPGKPGQLGSSGKP 619

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------------------IGLDGRD 199
           G++GP G++G  GP+G+PG  G  GP+G  G PG+                   G+ G  
Sbjct: 620 GQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGPLGSPGLPGLPGPPGLPGMKGDR 679

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRG 251
           G+ GEPG  G  G +G +G  G  G  G  G PG  G+    GE G+ GP G RG
Sbjct: 680 GVFGEPGPKGEQGASGEEGEAGVRGDLGDMGQPGPKGSVGNPGEPGLRGPEGIRG 734



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 80/188 (42%), Gaps = 40/188 (21%)

Query: 86  VWLNAYSRIPLV-AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
             L     +P +   +G         PPG  G +G  G+ G +G  G  G RG +G PG 
Sbjct: 580 AGLQGLPGVPGIPGAKGVAGEKGNTGPPGKPGQLGSSGKPGQQGPPGEVGPRGPRGLPGS 639

Query: 145 VGPPGPQGIPGDEGK---------------------RGPKGDMGYPGP---QGIPGDEGK 180
            GP GP+G PG  GK                     +G +G  G PGP   QG  G+EG+
Sbjct: 640 RGPVGPEGSPGIPGKLGPLGSPGLPGLPGPPGLPGMKGDRGVFGEPGPKGEQGASGEEGE 699

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGL 225
            G +GD+G  G+ G  G  G PGEPGL G  G  G+                G  G  GL
Sbjct: 700 AGVRGDLGDMGQPGPKGSVGNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGVQGEQGATGL 759

Query: 226 PGKDGIPG 233
           PG  G PG
Sbjct: 760 PGIQGPPG 767



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 87/180 (48%), Gaps = 27/180 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKG---- 164
           PG+ G  G  G  G KGE G  G  G+   +G PGV G PG +G+ G++G  GP G    
Sbjct: 553 PGVDGRDGIPGMPGTKGEAGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGPPGKPGQ 612

Query: 165 --DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------------ 204
               G PG QG PG+ G RGP+G  G  G +G +G  G+PG+                  
Sbjct: 613 LGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGPLGSPGLPGLPGPPGL 672

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PG+ G  G  G  G  G+ G  G++G  G  G  G+ G  GP+G+ G  G  G+ G   I
Sbjct: 673 PGMKGDRGVFGEPGPKGEQGASGEEGEAGVRGDLGDMGQPGPKGSVGNPGEPGLRGPEGI 732



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 75/185 (40%), Gaps = 36/185 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPKGD 165
           PG  GP G  G  G  G  G+ G  G KG  G  GPPG        G+PG  G +G  G+
Sbjct: 541 PGSPGPKGDTGLPGVDGRDGIPGMPGTKGEAGKPGPPGDAGLQGLPGVPGIPGAKGVAGE 600

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-- 223
            G  GP G PG  G  G  G  G PG +G  G  GLPG     G  G  G  GIPGK   
Sbjct: 601 KGNTGPPGKPGQLGSSGKPGQQGPPGEVGPRGPRGLPGS---RGPVGPEGSPGIPGKLGP 657

Query: 224 -------------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                                    G PG  G  G +G  GE G+ G  G+ G+ G  G 
Sbjct: 658 LGSPGLPGLPGPPGLPGMKGDRGVFGEPGPKGEQGASGEEGEAGVRGDLGDMGQPGPKGS 717

Query: 259 PGTPA 263
            G P 
Sbjct: 718 VGNPG 722



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 90/219 (41%), Gaps = 42/219 (19%)

Query: 96  LVAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PG 149
           +  M G      +  PPG   LQG  G  G  GAKG  G KG  G  G PG +G    PG
Sbjct: 561 IPGMPGTKGEAGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGPPGKPGQLGSSGKPG 620

Query: 150 PQGIPGDEGKRGPKG---DMGYPGPQGIPGDEGKRGP------------------KGDMG 188
            QG PG+ G RGP+G     G  GP+G PG  GK GP                  KGD G
Sbjct: 621 QQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGPLGSPGLPGLPGPPGLPGMKGDRG 680

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---- 244
             G  G  G  G  GE G  G+ G  G  G PG  G  G  G PG  G  G +G+     
Sbjct: 681 VFGEPGPKGEQGASGEEGEAGVRGDLGDMGQPGPKGSVGNPGEPGLRGPEGIRGLPGVEG 740

Query: 245 -----------GPRGNRGKSGINGVPGTPAICAYKRESC 272
                      G +G  G  GI G PG      + ++ C
Sbjct: 741 PRGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVC 779



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G++G+RGP  +G  G PG  G+PGD G       
Sbjct: 825 QMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAIGLPGDPG------- 877

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 878 ---PASYGKNGRDGEQGPPGV 895



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGD+G  G +G PG    RGPKG         
Sbjct: 825 QMGIRGLPGIKGPPGALGL------RGPKGDLGEKGERGPPG----RGPKG--------- 865

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPG+PG     G+NG DG  G  G+
Sbjct: 866 LPGAIGLPGDPGPASY-GKNGRDGEQGPPGV 895


>gi|13235596|emb|CAC33780.1| SclB protein [Streptococcus pyogenes]
          Length = 427

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/182 (45%), Positives = 100/182 (54%), Gaps = 6/182 (3%)

Query: 88  LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGV 144
           LN Y       +     +  E  P G +GP G+KGE G +GE    G  G+ G+ GA G 
Sbjct: 93  LNRYLETLDEGLDQLQGAKGEAGPAGPKGPAGEKGERGERGETGPAGPAGKDGDAGAQGP 152

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           +GP GPQG  GD+G+ G KGD G  G  G  G  G  G  G  G PG+ G DG+DG  G 
Sbjct: 153 MGPAGPQGPRGDKGETGDKGDQGPAGKDGERGPVGPAGKDGQDGLPGKDGKDGQDGQDGL 212

Query: 205 PGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG DG  G+NG DG+PGKDG     GKDG+PG +G +G+ G  G  G  GK G NG  G 
Sbjct: 213 PGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGQDGLPGKDGKDGQNGKDGL 272

Query: 262 PA 263
           P 
Sbjct: 273 PG 274



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 95/179 (53%), Gaps = 12/179 (6%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
               G   +     P G QGP G KGE G KG+ G  G+ GE+G  G  G  G  G+PG 
Sbjct: 141 AGKDGDAGAQGPMGPAGPQGPRGDKGETGDKGDQGPAGKDGERGPVGPAGKDGQDGLPGK 200

Query: 157 EGKRGPKGDMGYP---------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           +GK G  G  G P         G  G+PG +GK G  G  G PG+ G DG+DG  G PG 
Sbjct: 201 DGKDGQDGQDGLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGQDGLPGK 260

Query: 208 DGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           DG  G+NG DG+PGKDG     GKDG+PG +G +G+ G  G  G  GK G NG  G P 
Sbjct: 261 DGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQNGRDGLPG 319


>gi|414564528|ref|YP_006043489.1| collagen-like protein with amino-end fibronectin-binding domain
           SclZ.9 [Streptococcus equi subsp. zooepidemicus ATCC
           35246]
 gi|338847593|gb|AEJ25805.1| collagen-like protein with amino-end fibronectin-binding domain
           SclZ.9 [Streptococcus equi subsp. zooepidemicus ATCC
           35246]
          Length = 623

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/148 (50%), Positives = 86/148 (58%), Gaps = 15/148 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
           GL GP G KGE GA+G  G KGE G+ GA G  GP GP+G  G+ G++GPKGD G    P
Sbjct: 297 GLPGPAGPKGEPGARGPAGEKGEPGKPGARGPAGPQGPRGDKGETGEKGPKGDTGKDGEP 356

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  GIPG +G  GPKGD G PG  G +G+DG P            G DG  GKDG PG  
Sbjct: 357 GKPGIPGPQGLPGPKGDPGKPGPRGENGKDGAP------------GRDGQNGKDGQPGPQ 404

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  GE+G  GP+G RG+ G  G
Sbjct: 405 GERGEQGPQGERGEQGPQGERGEQGPQG 432



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/154 (48%), Positives = 88/154 (57%), Gaps = 9/154 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G+KG  G  G  G+ G  G KG PG  GP G +G PG  G RGP G     GP+
Sbjct: 279 GLNGPRGEKGPQGEPGRDGLPGPAGPKGEPGARGPAGEKGEPGKPGARGPAGPQ---GPR 335

Query: 173 GIPGDEGKRGPKGDMGY---PGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLP 226
           G  G+ G++GPKGD G    PG+ G+ G  GLP   G+PG  G  G NG DG PG+DG  
Sbjct: 336 GDKGETGEKGPKGDTGKDGEPGKPGIPGPQGLPGPKGDPGKPGPRGENGKDGAPGRDGQN 395

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           GKDG PG  G  GE+G  G RG +G  G  G  G
Sbjct: 396 GKDGQPGPQGERGEQGPQGERGEQGPQGERGEQG 429



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 83/152 (54%), Gaps = 6/152 (3%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +GP G+KGE    GA+G  G +G RG+KG  G  GP G  G  G+ GK G  G  G 
Sbjct: 308 PGARGPAGEKGEPGKPGARGPAGPQGPRGDKGETGEKGPKGDTGKDGEPGKPGIPGPQGL 367

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGL 225
           PGP+G PG  G RG  G  G PGR G +G+DG P   GE G  G  G  G  G  G+ G 
Sbjct: 368 PGPKGDPGKPGPRGENGKDGAPGRDGQNGKDGQPGPQGERGEQGPQGERGEQGPQGERGE 427

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G  G  GE+G  GP+G RG+ G  G
Sbjct: 428 QGPQGERGEQGPQGERGEQGPQGERGEQGPQG 459



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 79/150 (52%), Gaps = 3/150 (2%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           P G QGP G KGE G KG  G  G+ GE G PG+ GP   PGP+G PG  G RG  G  G
Sbjct: 328 PAGPQGPRGDKGETGEKGPKGDTGKDGEPGKPGIPGPQGLPGPKGDPGKPGPRGENGKDG 387

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            PG  G  G +G+ GP+G+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G
Sbjct: 388 APGRDGQNGKDGQPGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQG 447

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G  GE+G  GP+G RG+ G  G
Sbjct: 448 PQGERGEQGPQGERGEQGPQGERGEQGPQG 477



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 78/146 (53%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G  G  G  G+ G +GE G+ GAPG  G  G  G PG +G+RG +G  G  G 
Sbjct: 359 PGIPGPQGLPGPKGDPGKPGPRGENGKDGAPGRDGQNGKDGQPGPQGERGEQGPQGERGE 418

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QG  G+ G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G  G 
Sbjct: 419 QGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGE 478

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  GE+G  GP+G RG+ G  G
Sbjct: 479 RGEQGPQGERGEQGPQGERGEQGPQG 504



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 80/153 (52%), Gaps = 9/153 (5%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKG 164
           P GL GP G  G+ G +GE G  G  G  G  G  G PGPQG  G++G      ++GP+G
Sbjct: 364 PQGLPGPKGDPGKPGPRGENGKDGAPGRDGQNGKDGQPGPQGERGEQGPQGERGEQGPQG 423

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           + G  GPQ   G+ G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G+ G
Sbjct: 424 ERGEQGPQ---GERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERG 480

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G  G  GE+G  GP+G RG+ G  G
Sbjct: 481 EQGPQGERGEQGPQGERGEQGPQGERGEQGPQG 513



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 81/164 (49%), Gaps = 9/164 (5%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G    T E  P G  G  G+ G+ G  G  G+ G +G+ G PG  G  G  G PG +G+
Sbjct: 335 RGDKGETGEKGPKGDTGKDGEPGKPGIPGPQGLPGPKGDPGKPGPRGENGKDGAPGRDGQ 394

Query: 160 R------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                  GP+G+ G  GPQ   G+ G++GP+G+ G  G  G  G  G  GE G  G  G 
Sbjct: 395 NGKDGQPGPQGERGEQGPQ---GERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGE 451

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G+ G  G  G  G  G  GE+G  GP+G RG+ G  G
Sbjct: 452 RGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQG 495



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 75/146 (51%), Gaps = 24/146 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G++G  G +GE G +GERGE+G  G  G  GPQ   G+ G++GP+G+ G  GP
Sbjct: 401 PGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQ---GERGEQGPQGERGEQGP 457

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           Q   G+ G++GP+G+ G  G  G  G  G  GE G  G  G                   
Sbjct: 458 Q---GERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGER----------------- 497

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  GE+G  GP+G RG+ G  G
Sbjct: 498 -GEQGPQGERGEQGPQGERGEQGPQG 522



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 3/111 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G++GE G +GE G +G +GE+G  G  G  G QG  G+ G++GP+G+ G  GPQ
Sbjct: 417 GEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQ 476

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G   + G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G++
Sbjct: 477 G---ERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGEN 524



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 9/92 (9%)

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+ G  G++GP+G+          GRDGLPG  G  G PG  G  G  G+ G PG  G  
Sbjct: 279 GLNGPRGEKGPQGEP---------GRDGLPGPAGPKGEPGARGPAGEKGEPGKPGARGPA 329

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G  G+KG TG +G +G +G +G PG P I
Sbjct: 330 GPQGPRGDKGETGEKGPKGDTGKDGEPGKPGI 361


>gi|326666584|ref|XP_687953.4| PREDICTED: collagen alpha-1(VII) chain [Danio rerio]
          Length = 2001

 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/208 (41%), Positives = 103/208 (49%), Gaps = 29/208 (13%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK---GAPGVVGPPGPQGIPGDE 157
            G   S  E    GLQG  G +G+ G KG+ G KG +GE    G+PG+ G PG  G  GDE
Sbjct: 1373 GLSGSKGEVGIQGLQGIAGPRGKKGLKGDQGEKGAQGENGPIGSPGIAGFPGAAGRKGDE 1432

Query: 158  GKR-----------------GPKGDMGY---PGPQGIPGDEGKRGPKGDMGY--PGRIGL 195
            G+R                 G +GD+G    PGPQGI GD G +G KG+ G+  PG+ G 
Sbjct: 1433 GQRGAPGEPAKGILGPPGKKGARGDIGLVGPPGPQGIKGDRGDKGEKGNPGFGIPGQPGP 1492

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G  G  G  GL G PG  G DG  G     GLPG  G PG  G +GE G  G  G+RG 
Sbjct: 1493 KGESGERGNVGLSGKPGPKGNDGSKGDKGEIGLPGTSGSPGLRGKDGEPGSRGEPGDRGV 1552

Query: 253  SGINGVPGTPAICAYKRESCSL-LPNSE 279
             G  G+PG P     K E   L LP  E
Sbjct: 1553 KGPLGLPGRPGDPGDKGEPGKLGLPGPE 1580



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 91/162 (56%), Gaps = 22/162 (13%)

Query: 112  PGLQGPIGQKGEIGAKGE-----MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            PG  G  G +G+ GA GE     +G  G++G +G  G+VGPPGPQGI GD G +G KG+ 
Sbjct: 1423 PGAAGRKGDEGQRGAPGEPAKGILGPPGKKGARGDIGLVGPPGPQGIKGDRGDKGEKGNP 1482

Query: 167  GY-----PGPQGIPGDEG------KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPG 212
            G+     PGP+G  G+ G      K GPKG+    G  G IGL G  G PG  G DG PG
Sbjct: 1483 GFGIPGQPGPKGESGERGNVGLSGKPGPKGNDGSKGDKGEIGLPGTSGSPGLRGKDGEPG 1542

Query: 213  RNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              G     G+ G  GLPG+ G PG  G  G+ G+ GP G++G
Sbjct: 1543 SRGEPGDRGVKGPLGLPGRPGDPGDKGEPGKLGLPGPEGHKG 1584



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 93/207 (44%), Gaps = 51/207 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--------------GPPGPQGIPGDE 157
            PG +GP G  G++G  G  G KG+RGE+G PG V              G  GP G PG  
Sbjct: 1216 PGQRGPSGIPGDMGPPGNTGPKGQRGERGEPGYVMGGMEVLPGRKGEPGSSGPSGAPGVP 1275

Query: 158  GK--------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            G                     +G  G+ G  GP+G PG +G++G +G+ G PG  G  G
Sbjct: 1276 GVSGPPGLPGLPGPSGSPGLSIKGESGEPGPKGPRGKPGQKGEKGEQGNNGLPGLPGPVG 1335

Query: 198  RDGLPGEPGLDGIPGRNGMD-----------------GIPGKDGLPGKDGIPGTNGTNGE 240
             DGLPG  G  G  G++G+                  G+ G  G  G  G+ G  G  G+
Sbjct: 1336 VDGLPGLAGQKGEKGQDGIGTQGAQGPPGPPGEKGNTGLSGSKGEVGIQGLQGIAGPRGK 1395

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAY 267
            KG+ G +G +G  G NG  G+P I  +
Sbjct: 1396 KGLKGDQGEKGAQGENGPIGSPGIAGF 1422



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 95/215 (44%), Gaps = 66/215 (30%)

Query: 112  PGLQGPIGQKGEI---------GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG  GP G+ GE          G KG  G KG++GE G PG  G PG +G  G+ G RG 
Sbjct: 1487 PGQPGPKGESGERGNVGLSGKPGPKGNDGSKGDKGEIGLPGTSGSPGLRGKDGEPGSRGE 1546

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG---------------------- 200
             GD G  GP G+P   G+ G  GD G PG++GL G +G                      
Sbjct: 1547 PGDRGVKGPLGLP---GRPGDPGDKGEPGKLGLPGPEGHKGLKGEPGLPGPPGVTQFTTS 1603

Query: 201  --------LPGEPGLDGI--------------------PGRNGMDGIP-GKDGLPGKDGI 231
                    + GEPG  G+                    P  N + G   GKDGL G  GI
Sbjct: 1604 DNTVLTRAIKGEPGESGLPGPPGETGRPGPPGPEGKPGPPGNSLFGSSTGKDGLDGLPGI 1663

Query: 232  PGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
            PG+ G  G+K   G  G +G+ G++GI G+PG P 
Sbjct: 1664 PGSKGEAGQKGEPGSKGEKGDHGRAGITGMPGLPG 1698



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 94/238 (39%), Gaps = 75/238 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMG 167
            P G  G  G KGEIG  G  G  G RG+ G PG  G PG +G+ G     G+ G  GD G
Sbjct: 1510 PKGNDGSKGDKGEIGLPGTSGSPGLRGKDGEPGSRGEPGDRGVKGPLGLPGRPGDPGDKG 1569

Query: 168  YPGPQGIPGDEGKRGPKGDM------------------------GYPGRIGL-------- 195
             PG  G+PG EG +G KG+                         G PG  GL        
Sbjct: 1570 EPGKLGLPGPEGHKGLKGEPGLPGPPGVTQFTTSDNTVLTRAIKGEPGESGLPGPPGETG 1629

Query: 196  -------------------------DGRDGLPGEPGLDGIP---------------GRNG 215
                                     DG DGLPG PG  G                 GR G
Sbjct: 1630 RPGPPGPEGKPGPPGNSLFGSSTGKDGLDGLPGIPGSKGEAGQKGEPGSKGEKGDHGRAG 1689

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
            + G+PG  G PGK G+ G  G +G+ G  GP+G+ G+ G+ G PG       K E  S
Sbjct: 1690 ITGMPGLPGTPGKPGVDGKRGVSGKDGERGPKGDEGEKGVKGEPGANGNEGQKGEQGS 1747



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 84/161 (52%), Gaps = 5/161 (3%)

Query: 102  FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            F +ST +    GL G  G KGE G KGE G KGE+G+ G  G+ G PG  G PG  G  G
Sbjct: 1648 FGSSTGKDGLDGLPGIPGSKGEAGQKGEPGSKGEKGDHGRAGITGMPGLPGTPGKPGVDG 1707

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP--GRNGMDGI 219
             +G  G  G +G  GDEG++G KG+   PG  G +G+ G  G PGL G P   + GM   
Sbjct: 1708 KRGVSGKDGERGPKGDEGEKGVKGE---PGANGNEGQKGEQGSPGLPGPPIVLQEGMSIE 1764

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              K   P   G PG  G  G KG  G  G +G+ G  G PG
Sbjct: 1765 DMKKAFPLPMGPPGATGPPGMKGEKGEMGLKGEKGDAGAPG 1805



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 57/105 (54%), Gaps = 3/105 (2%)

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIP 220
            G  G  G  GIPG +G+ G KG+ G  G  G  GR G+ G PGL G PG+ G+D   G+ 
Sbjct: 1653 GKDGLDGLPGIPGSKGEAGQKGEPGSKGEKGDHGRAGITGMPGLPGTPGKPGVDGKRGVS 1712

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            GKDG  G  G  G  G  GE G  G  G +G+ G  G+PG P + 
Sbjct: 1713 GKDGERGPKGDEGEKGVKGEPGANGNEGQKGEQGSPGLPGPPIVL 1757



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 78/174 (44%), Gaps = 25/174 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG---DMGYPGPQGIP 175
            GQKGE G     G  G  G  G PG+ G PG  G PG  G+RGP G   DMG PG     
Sbjct: 1178 GQKGEKGDGFGHGGLGLPGTDGIPGLPGRPGRTGPPGSPGQRGPSGIPGDMGPPGNT--- 1234

Query: 176  GDEGKRGPKGDMGY--PGRIGLDGRDGLPGEPGLDGIPGRNGM----------------- 216
            G +G+RG +G+ GY   G   L GR G PG  G  G PG  G+                 
Sbjct: 1235 GPKGQRGERGEPGYVMGGMEVLPGRKGEPGSSGPSGAPGVPGVSGPPGLPGLPGPSGSPG 1294

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
              I G+ G PG  G  G  G  GEKG  G  G  G  G  GV G P +   K E
Sbjct: 1295 LSIKGESGEPGPKGPRGKPGQKGEKGEQGNNGLPGLPGPVGVDGLPGLAGQKGE 1348



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 44/134 (32%)

Query: 91   YSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
            + R  +  M G   +  +    G +G  G+ GE G KG+ G KG +GE GA         
Sbjct: 1685 HGRAGITGMPGLPGTPGKPGVDGKRGVSGKDGERGPKGDEGEKGVKGEPGA--------- 1735

Query: 151  QGIPGDEGKRGPKGDMGYPGP--------------------------------QGIPGDE 178
                G+EG++G +G  G PGP                                +G  G+ 
Sbjct: 1736 ---NGNEGQKGEQGSPGLPGPPIVLQEGMSIEDMKKAFPLPMGPPGATGPPGMKGEKGEM 1792

Query: 179  GKRGPKGDMGYPGR 192
            G +G KGD G PGR
Sbjct: 1793 GLKGEKGDAGAPGR 1806


>gi|405968602|gb|EKC33660.1| Collagen-like protein 4 [Crassostrea gigas]
          Length = 512

 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 147/316 (46%), Gaps = 45/316 (14%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P GL GP G  G+ G KG+ G+ G  G  G PG+ G PG QG+ G+ G++GPKG+ G PG
Sbjct: 187 PQGLAGPQGLPGQTGVKGQQGMMGLSGTPGKPGINGLPGIQGLKGEIGQQGPKGNAGDPG 246

Query: 171 P------QGIPGDEGKRGPKGD------------MGYPGRIGLDGRDGL---PGEPGLDG 209
           P      +G PG  G  GPKGD             G  G +G+ G  GL    GEPGL G
Sbjct: 247 PFGPAGLKGSPGAPGMAGPKGDRGDRGDTGMMGVQGPKGEMGVQGYTGLMGQKGEPGLMG 306

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP------A 263
           IPG NG  GI G+ G  G  G+PG  G  G++G TG  G  G SG +G PG         
Sbjct: 307 IPGSNGSPGIMGRKGETGTQGMPGAKGEMGQRGYTGLPGPVGASGPSGSPGQKGDRGQQG 366

Query: 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSI 323
               K E       S+    L  P+I G+        +  +E + V L C   G+P P++
Sbjct: 367 YFGQKGEKGDSGTGSDCCVQLAKPSIQGTSGTVYH--VTAKENNTVILPCKVNGYPSPAV 424

Query: 324 IWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNVPP------QILIRNR 377
            W  S++  +T  +     +  + L    ++  + G Y C A+++        +++++  
Sbjct: 425 TW--SKDGDVT--AINKGLMTVNGLVLVDVHVGDTGNYTCKAESILGVQEKVVELIVKGE 480

Query: 378 RVGVPIGRTATLECEV 393
           R       T   +CE 
Sbjct: 481 R------ETGEYQCEA 490



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 91/169 (53%), Gaps = 12/169 (7%)

Query: 112 PGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGLQGP   IG +G+ GA G  G+ G +G  G PG  G PG  G+PG  G  G  G  G 
Sbjct: 98  PGLQGPKGEIGNRGQDGANGTQGLPGLQGPIGLPGNKGEPGSVGLPGQTGTPGATGLPGT 157

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGL 225
            G  G+ G++G  GP G+ G PGR G  G  GL G    PG  G+ G+ GM G+ G  G 
Sbjct: 158 KGEPGLKGEDGPFGPTGNKGEPGRSGPQGPQGLAGPQGLPGQTGVKGQQGMMGLSGTPGK 217

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGK------SGINGVPGTPAICAYK 268
           PG +G+PG  G  GE G  GP+GN G       +G+ G PG P +   K
Sbjct: 218 PGINGLPGIQGLKGEIGQQGPKGNAGDPGPFGPAGLKGSPGAPGMAGPK 266



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 96/179 (53%), Gaps = 18/179 (10%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           V +QG          PG  GP G KGE G    KGE G+KG+ G +G PG+ GP G  G 
Sbjct: 50  VCIQGTTGLNGGKGDPGPMGPAGAKGETGYTGVKGEAGIKGDMGFRGIPGLQGPKGEIGN 109

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGL--- 207
            G +G  G +G  G  GP G+PG++G+    G +G PG+ G  G  GLP   GEPGL   
Sbjct: 110 RGQDGANGTQGLPGLQGPIGLPGNKGE---PGSVGLPGQTGTPGATGLPGTKGEPGLKGE 166

Query: 208 DGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           DG  G  G  G PG+       GL G  G+PG  G  G++GM G  G  GK GING+PG
Sbjct: 167 DGPFGPTGNKGEPGRSGPQGPQGLAGPQGLPGQTGVKGQQGMMGLSGTPGKPGINGLPG 225



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 85/161 (52%), Gaps = 15/161 (9%)

Query: 112 PGLQGPIG---QKGE---------IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           PGLQGPIG    KGE          G  G  G+ G +GE G  G  GP GP G  G+ G+
Sbjct: 122 PGLQGPIGLPGNKGEPGSVGLPGQTGTPGATGLPGTKGEPGLKGEDGPFGPTGNKGEPGR 181

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            GP+G  G  GPQG+PG  G +G +G MG  G  G  G +GL   PG+ G+ G  G  G 
Sbjct: 182 SGPQGPQGLAGPQGLPGQTGVKGQQGMMGLSGTPGKPGINGL---PGIQGLKGEIGQQGP 238

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G PG  G  G  G+ G  GM GP+G+RG  G  G+ G
Sbjct: 239 KGNAGDPGPFGPAGLKGSPGAPGMAGPKGDRGDRGDTGMMG 279



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 48/104 (46%), Gaps = 3/104 (2%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
             M G      E    G  G +GQKGE G    MG+ G  G  G  G  G  G QG+PG 
Sbjct: 275 TGMMGVQGPKGEMGVQGYTGLMGQKGEPGL---MGIPGSNGSPGIMGRKGETGTQGMPGA 331

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           +G+ G +G  G PGP G  G  G  G KGD G  G  G  G  G
Sbjct: 332 KGEMGQRGYTGLPGPVGASGPSGSPGQKGDRGQQGYFGQKGEKG 375



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 55/129 (42%), Gaps = 12/129 (9%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI--- 219
           +G  G  G +G PG  G  G KG+ GY    G+ G  G+ G+ G  GIPG  G  G    
Sbjct: 53  QGTTGLNGGKGDPGPMGPAGAKGETGY---TGVKGEAGIKGDMGFRGIPGLQGPKGEIGN 109

Query: 220 PGKDGLPGKDGIPGTN------GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
            G+DG  G  G+PG        G  GE G  G  G  G  G  G+PGT      K E   
Sbjct: 110 RGQDGANGTQGLPGLQGPIGLPGNKGEPGSVGLPGQTGTPGATGLPGTKGEPGLKGEDGP 169

Query: 274 LLPNSETSQ 282
             P     +
Sbjct: 170 FGPTGNKGE 178


>gi|432914357|ref|XP_004079072.1| PREDICTED: collagen alpha-2(VI) chain-like [Oryzias latipes]
          Length = 1008

 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/150 (48%), Positives = 85/150 (56%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  GQKG  G  G+ G KGERG  G PG+ GP G  GI G+ G+ G KG+MG  G
Sbjct: 246 PPGPKGHRGQKGAKGDIGQPGQKGERGRPGDPGIEGPIGQPGIKGEPGQMGDKGEMGSQG 305

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            +G+ G  G+ G  G  G  GRIG  G  G  G+ G DG PG  G  G  G DG  G  G
Sbjct: 306 KKGVAGIAGRNGTDGQKGKIGRIGAPGCKGDSGDRGPDGHPGDVGERGPLGTDGDKGDSG 365

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG +G  GE G  GP+G RG  G  G+PG
Sbjct: 366 RPGRSGPPGESGAPGPKGERGSPGSPGLPG 395



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/177 (44%), Positives = 90/177 (50%), Gaps = 27/177 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------KGD 165
           PG++GPIGQ G  G  G+MG KGE G +G  GV G  G  G  G +GK G       KGD
Sbjct: 277 PGIEGPIGQPGIKGEPGQMGDKGEMGSQGKKGVAGIAGRNGTDGQKGKIGRIGAPGCKGD 336

Query: 166 MGYPGPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPG------EPGLDGIPGR 213
            G  GP G PGD G+RGP      KGD G PGR G  G  G PG       PG  G+PG+
Sbjct: 337 SGDRGPDGHPGDVGERGPLGTDGDKGDSGRPGRSGPPGESGAPGPKGERGSPGSPGLPGQ 396

Query: 214 NGMDGI---------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G          PG+ G  GK G  G  G  GEKG  GP G RG  G  G+ G+
Sbjct: 397 KGRRGERGRTGVRGEPGRRGDYGKKGARGPPGPTGEKGEMGPEGLRGLPGEAGIQGS 453



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 97/254 (38%), Gaps = 94/254 (37%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------- 162
           G +GP G  G++G +G +G  G++G+ G PG  GPPG  G PG +G+RG           
Sbjct: 338 GDRGPDGHPGDVGERGPLGTDGDKGDSGRPGRSGPPGESGAPGPKGERGSPGSPGLPGQK 397

Query: 163 -----------------------------------KGDMGYPGPQGIPGDEGKRGPKGDM 187
                                              KG+MG  G +G+PG+ G +G KGD 
Sbjct: 398 GRRGERGRTGVRGEPGRRGDYGKKGARGPPGPTGEKGEMGPEGLRGLPGEAGIQGSKGDN 457

Query: 188 GYPG---------RIGLDGRDGLPG--------------------------------EPG 206
           G PG           G +G  G PG                                E G
Sbjct: 458 GLPGPRGAAGKPGGPGKNGTRGDPGDAGPRGEPGPPGPKGDVGRPGFGYPGPRGPPGEKG 517

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA--- 263
             G PG  G  G  G+ G PG  G PG  G  G  G  GPRG RG++G +G PG      
Sbjct: 518 EKGNPGPRGSRGECGQKGGPGDKGRPGEPGEPGSMGEPGPRGQRGEAGRDGDPGPEGDPG 577

Query: 264 -----ICAYKRESC 272
                +  Y RE+C
Sbjct: 578 LTECDVMTYIRETC 591



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 24/121 (19%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GPPGP+G     G++G KGD+G P            G KG+ G PG  G+   +G  G+P
Sbjct: 245 GPPGPKG---HRGQKGAKGDIGQP------------GQKGERGRPGDPGI---EGPIGQP 286

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------RGNRGKSGINGVP 259
           G+ G PG+ G  G  G  G  G  GI G NGT+G+KG  G       +G+ G  G +G P
Sbjct: 287 GIKGEPGQMGDKGEMGSQGKKGVAGIAGRNGTDGQKGKIGRIGAPGCKGDSGDRGPDGHP 346

Query: 260 G 260
           G
Sbjct: 347 G 347



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 71/152 (46%), Gaps = 35/152 (23%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---------- 157
           E  P GL+G  G+ G  G+KG+ G+ G RG  G PG  G  G +G PGD           
Sbjct: 435 EMGPEGLRGLPGEAGIQGSKGDNGLPGPRGAAGKPGGPGKNGTRGDPGDAGPRGEPGPPG 494

Query: 158 ----------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                           G  G KG+ G PGP+G  G+ G++G  GD G PG          
Sbjct: 495 PKGDVGRPGFGYPGPRGPPGEKGEKGNPGPRGSRGECGQKGGPGDKGRPGE--------- 545

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
           PGEPG  G PG  G  G  G+DG PG +G PG
Sbjct: 546 PGEPGSMGEPGPRGQRGEAGRDGDPGPEGDPG 577


>gi|440907326|gb|ELR57484.1| Collagen alpha-1(IX) chain, partial [Bos grunniens mutus]
          Length = 655

 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/192 (45%), Positives = 106/192 (55%), Gaps = 30/192 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VKGERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G               V GE+GEKG
Sbjct: 420 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGGLGEVGAQGPPGAQGLRGITGVAGEKGEKG 479

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIG 194
           A G+ G PGPQG+PG   D+G+RGP G++G  G   PQG PG  G  GPKGD G PG   
Sbjct: 480 ARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSPGIPGLPGPKGDTGLPG--- 536

Query: 195 LDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           +DGRDG+PG PG  G PG+       G+ G+PG  GLPG  G+ G  G  G  G  G  G
Sbjct: 537 VDGRDGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGLPGAKGVAGEKGNTGAPGKPGQLG 596

Query: 249 NRGKSGINGVPG 260
           N GK G  G PG
Sbjct: 597 NSGKPGRQGPPG 608



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 79/150 (52%), Gaps = 18/150 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE+G KG+RG +G+PG+ G P            GPKGD G
Sbjct: 486 EPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSPGIPGLP------------GPKGDTG 533

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 534 LPGVDGRDGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGLPGAKGVAGEKGNTGAPGKPG 593

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG  G  GE    GPRG RG SG
Sbjct: 594 QLGNSGKPGRQGPPGE---VGPRGPRGLSG 620



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 63/120 (52%), Gaps = 6/120 (5%)

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           PPG  G PG  G RG KG  G     G PG +G +G +GD G  G +G  G  G  G  G
Sbjct: 411 PPGRSGYPGLPGMRGHKGAKGE---IGEPGRQGHKGEEGDQGGLGEVGAQGPPGAQGLRG 467

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           + G+ G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 468 ITGVAGEKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSPGIPGLPG 527


>gi|301612090|ref|XP_002935544.1| PREDICTED: collagen alpha-1(XXVII) chain-like [Xenopus (Silurana)
            tropicalis]
          Length = 1797

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 91/158 (57%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P GLQG  G KG +G KG+ G  GE G  G PG +G  GP+G+ G +G+ GP G  G PG
Sbjct: 1336 PRGLQGLRGSKGTVGLKGKPGKPGESGAHGQPGAIGVTGPRGVVGRQGQEGPAGPDGIPG 1395

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              G PG +G++G  G++G  G +G  G  G+PG PG  G PG  G  G+PG+ GLPGK G
Sbjct: 1396 KDGSPGLKGEQGDDGEIGLAGTLGKRGNTGVPGLPGAQGPPGFRGERGLPGEIGLPGKRG 1455

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            + G  G +G KG  G +G  G  G  G PG   +   K
Sbjct: 1456 MEGGMGLSGAKGELGTKGQPGDPGEMGFPGIAGLFGPK 1493



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 93/179 (51%), Gaps = 28/179 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG----APGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            G +GP+G  G +GA+GE G+ G +GE+G    A G  G PG +G  GD G RG  GD GY
Sbjct: 1253 GTRGPVGSPGRMGAQGEPGMPGYQGEQGDDGKAEGTPGAPGDRGPVGDGGDRGEPGDPGY 1312

Query: 169  PGP------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG---- 212
            PG             QG+PG  G RG +G  G  G +GL G+ G PGE G  G PG    
Sbjct: 1313 PGQDGPEGPRGNAGQQGLPGHSGPRGLQGLRGSKGTVGLKGKPGKPGESGAHGQPGAIGV 1372

Query: 213  --------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                    R G +G  G DG+PGKDG PG  G  G+ G  G  G  GK G  GVPG P 
Sbjct: 1373 TGPRGVVGRQGQEGPAGPDGIPGKDGSPGLKGEQGDDGEIGLAGTLGKRGNTGVPGLPG 1431



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 86/153 (56%), Gaps = 12/153 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGD---EGKRGPKGD 165
            PGL+G  G  GEIG  G +G +G  G  G PG  GPP   G +G+PG+    GKRG +G 
Sbjct: 1400 PGLKGEQGDDGEIGLAGTLGKRGNTGVPGLPGAQGPPGFRGERGLPGEIGLPGKRGMEGG 1459

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            MG  G +G  G +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G 
Sbjct: 1460 MGLSGAKGELGTKGQPGDPGEMGFPGIAGLFGPKGPPGDVGFKGIQGPKGPLGLMGKEGA 1519

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G  GI G NG        GP G+RG  G NG+
Sbjct: 1520 GGPMGIVGPNGN------PGPVGDRGSQGDNGM 1546



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 87/175 (49%), Gaps = 36/175 (20%)

Query: 113 GLQGPI---GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G+ GP+   GQKG  G +G  G  G RG +G+PG  G PG QG+PG  G  GPKG+ GY 
Sbjct: 695 GVPGPLSRKGQKGYPGPQGHPGEPGVRGPEGSPGAKGYPGRQGLPGPIGVSGPKGNRGYI 754

Query: 170 GP------------QGIPGDEGKRGPKGDMGYPGR------------IGLDGRDGLPGEP 205
           GP            +G PGD G+RGP G  G PG             IG  G  G  G P
Sbjct: 755 GPPGLFGLPGADGERGFPGDFGERGPPGLDGNPGELGAPGPPGVPGFIGDMGAVGAVGFP 814

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           GL G+ G  G  GIPG  G           G  G +G+ GP G RGK+G+ G PG
Sbjct: 815 GLKGLKGIQGFPGIPGDIGF---------QGDKGSQGLPGPPGMRGKTGVMGKPG 860



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 83/149 (55%), Gaps = 12/149 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G  G  G +G +G +G+ GE+G PG  G PGPQG  G+ G  G  G  G  GP
Sbjct: 1042 PGLAGTKGPSGIQGKQGLIGPQGKMGERGIPGPNGFPGPQGAKGEPGPPGETGLKGDLGP 1101

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKD----- 223
             GIPG++G  G +GD G  G  GL G DG+ GE   PG +G  G  G++G  GKD     
Sbjct: 1102 LGIPGEQGLIGQRGDPGLEGESGLTGPDGMKGEIGQPGPEGEKGEKGVEGTKGKDGPPGP 1161

Query: 224  ----GLPGKDGIPGTNGTNGEKGMTGPRG 248
                G+ G+ G PG  G  GEKG+ G +G
Sbjct: 1162 SGIPGVRGEIGQPGPEGEKGEKGVEGTKG 1190



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 81/165 (49%), Gaps = 25/165 (15%)

Query: 121  KGEIGAKGEMGVKGERGEKGAP---------------GVVGPPGPQGIPGDEGKRGPKGD 165
            +GEIG  G  G KGE+G +G                 GV G PG QG  G  G++G KG 
Sbjct: 1168 RGEIGQPGPEGEKGEKGVEGTKGKDGPPGPSGIPGVRGVEGKPGKQGEKGKPGQKGSKGF 1227

Query: 166  MGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-IPG 221
             G+ G  G+PGD+   G +GPKG  G  G +G  GR G  GEPG+ G  G  G DG   G
Sbjct: 1228 EGHLGETGVPGDQGPTGNQGPKGSRGTRGPVGSPGRMGAQGEPGMPGYQGEQGDDGKAEG 1287

Query: 222  KDGLPGKDGIPGTNGTNGE------KGMTGPRGNRGKSGINGVPG 260
              G PG  G  G  G  GE       G  GP G RG +G  G+PG
Sbjct: 1288 TPGAPGDRGPVGDGGDRGEPGDPGYPGQDGPEGPRGNAGQQGLPG 1332



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 84/185 (45%), Gaps = 36/185 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG++GP G  G  G  G  G+ G     G KG  G +GPPG  G+PG +G+RG  GD G 
Sbjct: 718 PGVRGPEGSPGAKGYPGRQGLPGPIGVSGPKGNRGYIGPPGLFGLPGADGERGFPGDFGE 777

Query: 169 PGPQGIPGDEGK---------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            GP G+ G+ G+                G  G +G+PG  GL G  G PG PG  G  G 
Sbjct: 778 RGPPGLDGNPGELGAPGPPGVPGFIGDMGAVGAVGFPGLKGLKGIQGFPGIPGDIGFQGD 837

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTN------------------GEKGMTGPRGNRGKSGI 255
            G  G+PG  G+ GK G+ G  G                    G  G  GP G +GK G 
Sbjct: 838 KGSQGLPGPPGMRGKTGVMGKPGDKGFAGFPGPPGPEGFPGDIGPPGENGPEGIKGKPGA 897

Query: 256 NGVPG 260
            G PG
Sbjct: 898 RGFPG 902



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 93/216 (43%), Gaps = 48/216 (22%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+  QG         P G  GP G KGE G  GE G+KG+ G  G PG  G  G +G PG
Sbjct: 1059 LIGPQGKMGERGIPGPNGFPGPQGAKGEPGPPGETGLKGDLGPLGIPGEQGLIGQRGDPG 1118

Query: 156  DEGKRG------PKGDMGYPGPQGIPGDEGKRGPK---------------GDMGYPGRIG 194
             EG+ G       KG++G PGP+G  G++G  G K               G++G PG  G
Sbjct: 1119 LEGESGLTGPDGMKGEIGQPGPEGEKGEKGVEGTKGKDGPPGPSGIPGVRGEIGQPGPEG 1178

Query: 195  LDGRDGLPGEPGLD---------------GIPGRNGMDGIPGKD------------GLPG 227
              G  G+ G  G D               G PG+ G  G PG+             G+PG
Sbjct: 1179 EKGEKGVEGTKGKDGPPGPSGIPGVRGVEGKPGKQGEKGKPGQKGSKGFEGHLGETGVPG 1238

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G  G  G  G +G  GP G+ G+ G  G PG P 
Sbjct: 1239 DQGPTGNQGPKGSRGTRGPVGSPGRMGAQGEPGMPG 1274



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 79/196 (40%), Gaps = 54/196 (27%)

Query: 119  GQKGEIGAKGEMGVKGE------------------------------------------- 135
            G +G IG  GE G+ GE                                           
Sbjct: 959  GLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPGPPGSPGPPGPPGSPGSR 1018

Query: 136  -----RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                 RG KG  G  GP GP G PG  G +GP G  G  G  G  G  G+RG  G  G+P
Sbjct: 1019 GSPGVRGPKGRRGARGPDGPAGEPGLAGTKGPSGIQGKQGLIGPQGKMGERGIPGPNGFP 1078

Query: 191  GRIGLDGRDGLPGEPGLD------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  G  G PGE GL       GIPG  G+ G  G  GL G+ G+ G +G  GE G  
Sbjct: 1079 GPQGAKGEPGPPGETGLKGDLGPLGIPGEQGLIGQRGDPGLEGESGLTGPDGMKGEIGQP 1138

Query: 245  GPRGNRGKSGINGVPG 260
            GP G +G+ G+ G  G
Sbjct: 1139 GPEGEKGEKGVEGTKG 1154



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 91/209 (43%), Gaps = 48/209 (22%)

Query: 100 QGFCNSTKEYCPPGLQGP---------------IGQKGEIGAKGEMGVKGERGEKGAPGV 144
           +GF     E  PPGL G                IG  G +GA G  G+KG +G +G PG+
Sbjct: 769 RGFPGDFGERGPPGLDGNPGELGAPGPPGVPGFIGDMGAVGAVGFPGLKGLKGIQGFPGI 828

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE---------------------GKRGP 183
            G  G QG  G +G  GP G  G  G  G PGD+                     G+ GP
Sbjct: 829 PGDIGFQGDKGSQGLPGPPGMRGKTGVMGKPGDKGFAGFPGPPGPEGFPGDIGPPGENGP 888

Query: 184 KGDMGYPGRIGLDGRDGLPGEPG------------LDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G  G PG  G  G  G PG  G            L+G PGR G  GI G +G  G+ G 
Sbjct: 889 EGIKGKPGARGFPGPRGQPGHEGDEGPIGPPGAPGLEGFPGRKGYPGILGAEGPKGEAGN 948

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G +G  GE+G+ G  G  G++GI G  G
Sbjct: 949 TGRSGKIGEQGLQGFIGPVGETGIAGEKG 977



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 90/222 (40%), Gaps = 72/222 (32%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK----------- 159
           P G+ GP G +G IG  G  G+ G  GE+G PG  G  GP G+ G+ G+           
Sbjct: 741 PIGVSGPKGNRGYIGPPGLFGLPGADGERGFPGDFGERGPPGLDGNPGELGAPGPPGVPG 800

Query: 160 ----RGPKGDMGYPGPQ---------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
                G  G +G+PG +         GIPGD G +G KG  G PG  G+ G+ G+ G+PG
Sbjct: 801 FIGDMGAVGAVGFPGLKGLKGIQGFPGIPGDIGFQGDKGSQGLPGPPGMRGKTGVMGKPG 860

Query: 207 LD------------------GIPGRNGMDGIPGK-------------------------- 222
                               G PG NG +GI GK                          
Sbjct: 861 DKGFAGFPGPPGPEGFPGDIGPPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPG 920

Query: 223 ----DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               +G PG+ G PG  G  G KG  G  G  GK G  G+ G
Sbjct: 921 APGLEGFPGRKGYPGILGAEGPKGEAGNTGRSGKIGEQGLQG 962



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 90/233 (38%), Gaps = 75/233 (32%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGE---------------------KGAPGVVGPPG 149
            PPG  GP G KG+ GA+G  G +G+ G                      KG PG++G  G
Sbjct: 882  PPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPGAPGLEGFPGRKGYPGILGAEG 941

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD----------------------- 186
            P+G  G+ G+ G  G+ G  G  G  G+ G  G KGD                       
Sbjct: 942  PKGEAGNTGRSGKIGEQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPG 1001

Query: 187  ----------------------MGYPGRIGLDGRDGLPGEPGL------DGIPGRNGMDG 218
                                   G  GR G  G DG  GEPGL       GI G+ G+ G
Sbjct: 1002 PPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGPSGIQGKQGLIG 1061

Query: 219  IPGK---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              GK    G+PG +G PG  G  GE G  G  G +G  G  G+PG   +   +
Sbjct: 1062 PQGKMGERGIPGPNGFPGPQGAKGEPGPPGETGLKGDLGPLGIPGEQGLIGQR 1114



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 80/200 (40%), Gaps = 57/200 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
            PG+ G  G KGE G  G     G+ GE+G  G +GP G  GI G++G R           
Sbjct: 934  PGILGAEGPKGEAGNTGR---SGKIGEQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGE 990

Query: 161  ----------------------------------GPKGDMGYPGPQGIPGDEGKRGPKGD 186
                                              GPKG  G  GP G  G+ G  G KG 
Sbjct: 991  KGTMGHPGNPGPPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGP 1050

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN------GTNGE 240
             G  G+ GL G  G  GE    GIPG NG  G  G  G PG  G  G        G  GE
Sbjct: 1051 SGIQGKQGLIGPQGKMGE---RGIPGPNGFPGPQGAKGEPGPPGETGLKGDLGPLGIPGE 1107

Query: 241  KGMTGPRGNRGKSGINGVPG 260
            +G+ G RG+ G  G +G+ G
Sbjct: 1108 QGLIGQRGDPGLEGESGLTG 1127



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 60/146 (41%), Gaps = 52/146 (35%)

Query: 155 GDEGKRGP----------------------------------------KGDMGYPGPQGI 174
           G +G++G                                         KG  GYPGPQG 
Sbjct: 655 GPKGQKGDPGLSPGKAINGLKAFAHRMLCLQGDPGLPGLTGVPGPLSRKGQKGYPGPQGH 714

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG+ G RGP+G    PG  G  GR GLPG  G+ G  G  G  G PG  GLPG D     
Sbjct: 715 PGEPGVRGPEGS---PGAKGYPGRQGLPGPIGVSGPKGNRGYIGPPGLFGLPGAD----- 766

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPG 260
               GE+G  G  G RG  G++G PG
Sbjct: 767 ----GERGFPGDFGERGPPGLDGNPG 788



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 81/167 (48%), Gaps = 18/167 (10%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV----------- 144
           L  +QGF     +    G +G  G  G  G +G+ GV G+ G+KG  G            
Sbjct: 819 LKGIQGFPGIPGDIGFQGDKGSQGLPGPPGMRGKTGVMGKPGDKGFAGFPGPPGPEGFPG 878

Query: 145 -VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            +GPPG     G EG +G  G  G+PGP+G PG EG  GP G  G PG  G  GR G PG
Sbjct: 879 DIGPPGEN---GPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPGAPGLEGFPGRKGYPG 935

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
             G +G  G  G  G  GK    G+ G+ G  G  GE G+ G +G+R
Sbjct: 936 ILGAEGPKGEAGNTGRSGKI---GEQGLQGFIGPVGETGIAGEKGDR 979



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 97/265 (36%), Gaps = 82/265 (30%)

Query: 88   LNAYSRIPL-VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAK------------------G 128
            +  +  IP  +  QG   S     PPG++G  G  G+ G K                  G
Sbjct: 822  IQGFPGIPGDIGFQGDKGSQGLPGPPGMRGKTGVMGKPGDKGFAGFPGPPGPEGFPGDIG 881

Query: 129  EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------GYPGPQGIPGDEGKRG 182
              G  G  G KG PG  G PGP+G PG EG  GP G        G+PG +G PG  G  G
Sbjct: 882  PPGENGPEGIKGKPGARGFPGPRGQPGHEGDEGPIGPPGAPGLEGFPGRKGYPGILGAEG 941

Query: 183  PKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNG------------------------ 215
            PKG+ G  GR   IG  G  G  G  G  GI G  G                        
Sbjct: 942  PKGEAGNTGRSGKIGEQGLQGFIGPVGETGIAGEKGDRGGIGSPGPPGEKGTMGHPGNPG 1001

Query: 216  ---------------------MDGIPGKDGLPGKDGI---PGTNGT------NGEKGMTG 245
                                 + G  G+ G  G DG    PG  GT       G++G+ G
Sbjct: 1002 PPGSPGPPGPPGSPGSRGSPGVRGPKGRRGARGPDGPAGEPGLAGTKGPSGIQGKQGLIG 1061

Query: 246  PRGNRGKSGINGVPGTPAICAYKRE 270
            P+G  G+ GI G  G P     K E
Sbjct: 1062 PQGKMGERGIPGPNGFPGPQGAKGE 1086


>gi|192676|gb|AAA21834.1| alpha-1 type IX collagen [Mus musculus]
 gi|744962|prf||2015346A collagen:SUBUNIT=alpha1:ISOTYPE=IX
          Length = 921

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/184 (45%), Positives = 104/184 (56%), Gaps = 21/184 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQ------GIPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPGPQ      GI GD+G++G 
Sbjct: 426 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGDQGPPGPQGLRGITGIVGDKGEKGA 485

Query: 163 KGDMGYPGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQGIP   GD+G+RGP G+ G  G  G+ G  G+PG PG        G  G+
Sbjct: 486 RGFDGEPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSPGP------KGDTGL 539

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
           PG D   G+DGIPG  GT GE G  GP G+ G +G+ GVPG P       E  +     +
Sbjct: 540 PGVD---GRDGIPGMPGTKGEAGKPGPPGDVGIAGLPGVPGIPGAKGVAGEKGNTGAPGK 596

Query: 280 TSQL 283
             QL
Sbjct: 597 PGQL 600



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G+ G  G +G+ G  GE G +G+RG +G+ G+ G P            GPKGD G
Sbjct: 491 EPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG +G+ G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEAGKPGPPGDVGIAGLPGVPGIPGAKGVAGEKGNTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG  G  G PG P 
Sbjct: 599 QLGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPG 640



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 83/175 (47%), Gaps = 21/175 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E   PG  G +G  G  G  G  G KG  GEKG  G  G PG  G  G  
Sbjct: 547 GIPGMPGTKGEAGKPGPPGDVGIAGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKP 606

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG------------------LDGRD 199
           G++GP G++G  GP+G+PG  G  GP+G  G PG++G                  + G  
Sbjct: 607 GQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDR 666

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRG 251
           G+ GEPG  G  G +G +G  G  G  G  G PG  G+    GE G+ GP G RG
Sbjct: 667 GVFGEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGIRG 721



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 77/176 (43%), Gaps = 54/176 (30%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   ++G  G+ G++G PG VGP GP+G+PG  G  GP+G  G 
Sbjct: 579 PGAKGVAGEKGNTGAPGKPGQLGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGI 638

Query: 169 PGP------------------------------------QGIPGDEGKRGPKGDMGYPGR 192
           PG                                     QG  G+EG+ G +GD+G  G+
Sbjct: 639 PGKLGSVGSPGLPGLPGPPGLPGMKGDRGVFGEPGPKGEQGASGEEGEAGARGDLGDMGQ 698

Query: 193 IGLDGRDGLPGEPGLDGIPGRNG---------------MDGIPGKDGLPGKDGIPG 233
            G  G  G PGEPGL G  G  G               M G  G  GLPG  G PG
Sbjct: 699 PGPKGSVGNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGMQGDQGATGLPGIQGPPG 754



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 82/171 (47%), Gaps = 18/171 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  G+ G+ G  G++G+ G  G  G PG  G  G +G  G  GK G  G  G PG 
Sbjct: 549 PGMPGTKGEAGKPGPPGDVGIAGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKPGQ 608

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------LDGIPGR 213
           QG PG+ G RGP+G  G  G +G +G  G+PG+ G                  + G  G 
Sbjct: 609 QGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDRGV 668

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G+ G  G++G  G  G  G+ G  GP+G+ G  G  G+ G   I
Sbjct: 669 FGEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGI 719



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G++G+RGP  +G  G PG  G+PGD G       
Sbjct: 812 QMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAIGLPGDPG------- 864

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 865 ---PASYGKNGRDGEQGPPGV 882



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGD+G  G +G PG    RGPKG         
Sbjct: 812 QMGIRGLPGIKGPPGALGL------RGPKGDLGEKGERGPPG----RGPKG--------- 852

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPG+PG     G+NG DG  G  G+
Sbjct: 853 LPGAIGLPGDPGPASY-GKNGRDGEQGPPGV 882


>gi|326673979|ref|XP_701165.5| PREDICTED: otolin-1-A-like [Danio rerio]
          Length = 482

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 94/169 (55%), Gaps = 17/169 (10%)

Query: 102 FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEG 158
           FC    E CPP       +KG  G KG+MG+ G  GEKGAPG   + GP GP+G  G +G
Sbjct: 114 FC----ECCPP-------EKGPQGFKGDMGLPGPPGEKGAPGPSGLPGPIGPKGNSGSKG 162

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---G 215
            +G KGD G  G  G PG++GK G KG+MG  G  G  G  G  GE G  G P  N   G
Sbjct: 163 DKGEKGDQGNTGFAGTPGNQGKAGMKGEMGNKGEKGAAGLPGFKGEKGEKGDPNFNVSKG 222

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G PGKDGLPG  G  G  G  GE+G  G  G+RG+ G  G PG+P +
Sbjct: 223 DQGEPGKDGLPGPQGSAGEKGEKGERGECGLLGDRGQKGEPGDPGSPGV 271



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 88/160 (55%), Gaps = 9/160 (5%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  +       G++G +G KGE GA G  G KGE+GEKG P      G QG PG +   
Sbjct: 174 GFAGTPGNQGKAGMKGEMGNKGEKGAAGLPGFKGEKGEKGDPNFNVSKGDQGEPGKD--- 230

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                 G PGPQG  G++G++G +G+ G  G  G  G  G PG PG+ G PG +G  G+ 
Sbjct: 231 ------GLPGPQGSAGEKGEKGERGECGLLGDRGQKGEPGDPGSPGVRGDPGPSGQHGMH 284

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G+ G+ G PGT G  GE G+ GP G +G  G+ G+ G
Sbjct: 285 GNPGITGERGEPGTPGPKGEPGIQGPPGTKGLRGLRGIKG 324



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 87/171 (50%), Gaps = 24/171 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---------------------KGERGEKGAPGVVGPPGP 150
           PG QG  G KGE+G KGE G                      KG++GE G  G+ GP G 
Sbjct: 179 PGNQGKAGMKGEMGNKGEKGAAGLPGFKGEKGEKGDPNFNVSKGDQGEPGKDGLPGPQGS 238

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G  G++G+RG  G +G  G +G PGD G  G +GD G  G+ G+ G  G+ GE G  G 
Sbjct: 239 AGEKGEKGERGECGLLGDRGQKGEPGDPGSPGVRGDPGPSGQHGMHGNPGITGERGEPGT 298

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG  G  GI    G PG  G+ G  G  G++G  G RG+RG  G+ G  GT
Sbjct: 299 PGPKGEPGI---QGPPGTKGLRGLRGIKGDRGPQGKRGDRGLRGMKGAMGT 346



 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---NGTNGEKGMTGPRGNRGKSGING 257
            P E G  G  G  G+ G PG+ G PG  G+PG     G +G KG  G +G++G +G  G
Sbjct: 118 CPPEKGPQGFKGDMGLPGPPGEKGAPGPSGLPGPIGPKGNSGSKGDKGEKGDQGNTGFAG 177

Query: 258 VPGTPAICAYKRE 270
            PG       K E
Sbjct: 178 TPGNQGKAGMKGE 190


>gi|410036905|ref|XP_003950149.1| PREDICTED: collagen alpha-1(VII) chain [Pan troglodytes]
          Length = 2944

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 102/189 (53%), Gaps = 22/189 (11%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD 156
             ++G      +  P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD
Sbjct: 2478 GIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGD 2537

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G+RGP+G  G  GP+G  GD G +G KG+ G  G  GL G  GLPG        G+ G 
Sbjct: 2538 MGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLPGP------QGQPGA 2591

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV---------------PGT 261
             GIPG  G PGKDG+PG  G  G+ G  GPRG +G+ G+ G                PG 
Sbjct: 2592 AGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGR 2651

Query: 262  PAICAYKRE 270
            P +  +K E
Sbjct: 2652 PGLAGHKGE 2660



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 98/179 (54%), Gaps = 21/179 (11%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQG---- 152
            +G      E  P GL G  G +G+ G  G+ G KGE G+KG+   PG+ G PGPQG    
Sbjct: 2532 RGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLPGPQGQPGA 2591

Query: 153  --IPGDEGK---------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
              IPGD G          RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G 
Sbjct: 2592 AGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGP 2648

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG PGL G  G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G  G PG
Sbjct: 2649 PGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 2707



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 92/194 (47%), Gaps = 46/194 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                    PG   
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGARE 1717

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGL 195
            +G PGD G+ GP+G  G PG  G PG+ G                RGP G+ G  G  GL
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGLRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG------N 249
            DGR GL G+P   G PG +G +G  GK G PG+DG+PG  G     G +GP G       
Sbjct: 1778 DGRSGLDGKP---GAPGPSGPNGAAGKAGDPGRDGLPGLRGEQALSGPSGPPGLPVRPXX 1834

Query: 250  RGKSGINGVPGTPA 263
             GK G+NG  G P 
Sbjct: 1835 DGKPGLNGKNGEPG 1848



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 82/176 (46%), Gaps = 38/176 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG  G      P G PG  G +G  G+ G PG  
Sbjct: 2617 GFMGPRGLKGERGVKGACGLDGEKGDKGEAG------PPGRPGLAGHKGEMGEPGVPGQS 2670

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMD------------ 217
            G PG EG  GPKGD G+ G+ G  G  G  GE   PG+ G PG +G D            
Sbjct: 2671 GAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIRGFPGPSGNDGSAGPPGPPGSV 2730

Query: 218  ---------------GIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                           G PG+   G PG  G PG  G  G  G  GPRG +G++ + 
Sbjct: 2731 GPRGPEGLQGQKGERGPPGERVVGDPGAPGAPGERGEQGRPGPAGPRGEKGEAALT 2786



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 78/141 (55%), Gaps = 12/141 (8%)

Query: 133  KGERG--EKGAPGVVGPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPK 184
            KGE+G  E GAPG+   PG  G PG++G RGP      KGD G+PGP G  G++G+RGP 
Sbjct: 1444 KGEKGDSEDGAPGL---PGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP 1500

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  
Sbjct: 1501 GPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDV 1559

Query: 245  GPRGNRGKSGINGVPGTPAIC 265
            GP G RG +G+ G  G P + 
Sbjct: 1560 GPAGPRGATGVQGERGPPGLV 1580



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 94/255 (36%), Gaps = 106/255 (41%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G+ G  G +GE G KGERGE+G                           PG+ 
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG +G +GPKGD G PG +G  G+ G RG  G+ G PG  G+ G +
Sbjct: 2105 GEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGVAGPE 2164

Query: 200  ---------------------------------------GLPGEPGLDGIPGRN------ 214
                                                   GL GEPG  G PGR       
Sbjct: 2165 GKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTG 2224

Query: 215  -----------------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                                         G  G PG+DG  GKDG  G+ G  G  G+ G
Sbjct: 2225 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPG 2284

Query: 246  PRGNRGKSGINGVPG 260
            P G +G+ G  G PG
Sbjct: 2285 PVGPKGEPGPTGAPG 2299



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 87/199 (43%), Gaps = 61/199 (30%)

Query: 122  GEIGAKGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            GE+G KG+ G           GERG +GAPGV GP G +G  GD G+ G  G  G  GP 
Sbjct: 1634 GEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPK 1693

Query: 172  ------------------------QGIPGD---EGKRGPKGDMGYPGRIGLDGRDGL--- 201
                                    +G PGD   EG RGPKGD G PG  G  G +GL   
Sbjct: 1694 GDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGLRGP 1753

Query: 202  ------------------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
                               G PGLD   GR+G+DG PG  G  G +G  G  G  G  G+
Sbjct: 1754 PGPQGDPGVRGPAGEKGDRGPPGLD---GRSGLDGKPGAPGPSGPNGAAGKAGDPGRDGL 1810

Query: 244  TGPRGNRGKSGINGVPGTP 262
             G RG +  SG +G PG P
Sbjct: 1811 PGLRGEQALSGPSGPPGLP 1829



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 82/175 (46%), Gaps = 33/175 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRGPKGD 165
            G QGP G++G IG  GE G+KG+RG+ G       A G  GPPGP G+ G+ GK    G 
Sbjct: 1985 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGK---PGI 2041

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL-----------------------P 202
             G PG  G  G+ G+ G +G+ G  G  G  GRDG                        P
Sbjct: 2042 PGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGP 2101

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G PG  G  G PG DG  G  G  G  G  G++G  GPRG  G  G+ G
Sbjct: 2102 GLSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPG 2156



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 85/205 (41%), Gaps = 72/205 (35%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--------------- 157
            GL GP G+KGE G  GE G  GE G+KGA      PGP+G  GD                
Sbjct: 2333 GLPGPRGEKGEAGRAGEPGDPGEDGQKGA------PGPKGFKGDPGVGVPGSPGPPGPPG 2386

Query: 158  --------------------GKRGPKGDMGYPGP---QGIPGDEGKR------------- 181
                                G+ GP+G+MG PGP   +G+ G  G+              
Sbjct: 2387 VKGDLGLPGPPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPG 2446

Query: 182  --------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                    G KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG
Sbjct: 2447 SVGPPGASGLKGDKGDPG-------AGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPG 2499

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGV 258
            + G  GEKG  G  G +G  G + V
Sbjct: 2500 SRGERGEKGDVGSAGLKGDKGDSAV 2524



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 73/156 (46%), Gaps = 21/156 (13%)

Query: 112  PGLQGPIGQKGEIG------------AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            PGL G  G++G  G             +G  G KG+RG  G  G  G  G  G PG  G 
Sbjct: 1736 PGLPGAPGERGIEGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAPGPSGP 1795

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G  G  G PG  G+PG  G++   G  G P         GLP  P  DG PG NG +G 
Sbjct: 1796 NGAAGKAGDPGRDGLPGLRGEQALSGPSGPP---------GLPVRPXXDGKPGLNGKNGE 1846

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            PG  G  G+ G  G +G +G +G  GP+G RG  GI
Sbjct: 1847 PGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGI 1882



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 83/193 (43%), Gaps = 52/193 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++G+P         G VGP   PGP G PG    
Sbjct: 2244 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2303

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG  G+ GD  G+ G KGD G PG  G  G  G  GEP   G PG +G 
Sbjct: 2304 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP---GDPGEDGQ 2358

Query: 217  DGIPGKDGLPG--------------------------------KDGIPGTNGTNGEKGMT 244
             G PG  G  G                                  G PG  G  GE G  
Sbjct: 2359 KGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGPPGAPGVVGFPGQTGPRGEMGQP 2418

Query: 245  GPRGNRGKSGING 257
            GP G RG +G  G
Sbjct: 2419 GPSGERGLAGPPG 2431



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 94/238 (39%), Gaps = 87/238 (36%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------ 148
            G      E   PG  G  G+KG+ GA G  G  G +GE+GAPG++GP             
Sbjct: 1839 GLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPP 1898

Query: 149  -----------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG------------------ 179
                       GP+G   D G+ G KG+ G PG +G+ G+ G                  
Sbjct: 1899 GQGFPGVPGGTGPKG---DRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASA 1955

Query: 180  ---------------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------- 208
                                 +RGPKGD G  G  G +G  G PGE GL           
Sbjct: 1956 LREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQG 2015

Query: 209  ---------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                     G PG +G+ G PGK G+P   G+PG  G  GE G  G RG RG+ G  G
Sbjct: 2016 PPGLALGERGPPGPSGLAGEPGKPGIP---GLPGRAGGVGEAGRPGERGERGEKGERG 2070



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 94/248 (37%), Gaps = 99/248 (39%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
            P + GP G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD             
Sbjct: 1547 PAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1606

Query: 157  --------------------------EGKRGPKGD------------MGYPGPQGIPGDE 178
                                      +G+ G KGD             G  G +G PG  
Sbjct: 1607 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGL 207
            G  G KGD G PG    DGR+G P                               GEPG 
Sbjct: 1667 GPVGEKGDQGDPGE---DGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGD 1723

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGI 255
             G  G  G  G PG  G PG+ GI G              G  GEKG  GP G  G+SG+
Sbjct: 1724 RGQEGPRGPKGDPGLPGAPGERGIEGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGL 1783

Query: 256  NGVPGTPA 263
            +G PG P 
Sbjct: 1784 DGKPGAPG 1791



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 63/120 (52%), Gaps = 29/120 (24%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1250 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGR 1306

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-IGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG++G RGPKG+ G PG+ IG +G  GLPG
Sbjct: 1307 PGSPGRPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEPGAPGQVIGGEG-PGLPG 1365



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 74/157 (47%), Gaps = 29/157 (18%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGP------- 147
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG   ++GP       
Sbjct: 2629 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2688

Query: 148  --PGPQGIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRGPKGDMGYP 190
              PGP+G  G++G+RG  G  G+PGP G                 G EG +G KG+ G P
Sbjct: 2689 GQPGPKGDQGEKGERGTPGIRGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPP 2748

Query: 191  GR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G   +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 2749 GERVVGDPGAPGAPGERGEQGRPGPAGPRGEKGEAAL 2785



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 94/255 (36%), Gaps = 101/255 (39%)

Query: 106  TKEYCPPGL------------QGPIGQKGEIGAKGEMGVKGERGEKGAPGV--------- 144
            + E  PPGL            QGP G +G  G KG+ G  G RG+ G PG+         
Sbjct: 2104 SGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGVAGP 2163

Query: 145  ------------------------------------VGPPGPQGIPGDEGKRGPKGDMGY 168
                                                 GP G +G PG+ G  G     G 
Sbjct: 2164 EGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPG----RGL 2219

Query: 169  PGP------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGL 207
             GP                  QG PG  G+ G  G  G PGR G  G+D   G PG PG 
Sbjct: 2220 TGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGS 2279

Query: 208  DGIPGRNGMDGIPGKDGLPGKD--GIPGTN-----------------GTNGEKGMTGPRG 248
             G+PG  G  G PG  G PG+   G+PG                   G  G++G+ GPRG
Sbjct: 2280 PGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRG 2339

Query: 249  NRGKSGINGVPGTPA 263
             +G++G  G PG P 
Sbjct: 2340 EKGEAGRAGEPGDPG 2354



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 84/247 (34%), Gaps = 99/247 (40%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------------------- 144
            GP G +GE G+KGE G+ GERG +G PG                                
Sbjct: 1910 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 1969

Query: 145  -----------------VGPP---GPQGIPGDEGKR----------------------GP 162
                              GPP   GP G PG+ G +                      GP
Sbjct: 1970 FLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2029

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------- 208
             G  G PG  GIPG  G+ G  G+ G PG  G  G  G  GE G D              
Sbjct: 2030 SGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGP 2089

Query: 209  ------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                        G+ G  G  G+ G  G PG DG  G  G  G  G+ G RG  G  G +
Sbjct: 2090 PGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQD 2149

Query: 257  GVPGTPA 263
            G PG P 
Sbjct: 2150 GNPGLPG 2156



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 70/151 (46%), Gaps = 30/151 (19%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G   S  E  P G  G IG KG+ G  G +G  GE+GE+G P   GP G +G+PG  
Sbjct: 1456 GLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP---GPAGSRGLPGVA 1512

Query: 158  G---------------KRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYPG 191
            G               ++G KG+ G P           GP+G  GD G  GP+G  G  G
Sbjct: 1513 GRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQG 1572

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
              G  G   LPG+PG  G PG  G  G+ G+
Sbjct: 1573 ERGPPGLV-LPGDPGPKGDPGDRGPIGLTGR 1602



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 76/183 (41%), Gaps = 63/183 (34%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP--------QGI--------- 153
            P G +G  G KGE G  GE G++GE      PG V    P         GI         
Sbjct: 1911 PKGDRGETGSKGEQGLPGERGLRGE------PGSV----PNVDRLLETAGIKASALREIV 1960

Query: 154  -----------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD------ 196
                       P  E +RGPKGD G    QG PG EG       +G+PG  GL       
Sbjct: 1961 ETWDESSGSFLPVPERRRGPKGDSGE---QGPPGKEGP------IGFPGERGLKGDRGDP 2011

Query: 197  ----------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                      G  G PG  GL G PG+ G+ G+PG+ G  G+ G PG  G  GEKG  G 
Sbjct: 2012 GPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGE 2071

Query: 247  RGN 249
            +G 
Sbjct: 2072 QGR 2074



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 73/191 (38%), Gaps = 69/191 (36%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPG 149
            +G    + E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG
Sbjct: 1978 RGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPG 2037

Query: 150  PQGIPGDEGKRGPKGDMGYPG--------------------------------------- 170
              GIPG  G+ G  G+ G PG                                       
Sbjct: 2038 KPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVD 2097

Query: 171  -----------PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                       P G+ G +G+      +GPKGD G P   G+ G  G PG  G DG PG 
Sbjct: 2098 EPGPGLSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVP---GIKGDRGEPGPRGQDGNPGL 2154

Query: 214  NGMDGIPGKDG 224
             G  G+ G +G
Sbjct: 2155 PGERGVAGPEG 2165



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 41/102 (40%), Gaps = 30/102 (29%)

Query: 183  PKGDMGYPGRIGLDGR------------------------------DGLPGEPGLDGIPG 212
            PKG  G PG +GL G+                               G PG  G  G PG
Sbjct: 1252 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPG 1311

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            R G  G PG  GL G  G+PG  G  GE+G  GP+G  G  G
Sbjct: 1312 RPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEPGAPG 1353


>gi|410263264|gb|JAA19598.1| collagen, type VII, alpha 1 [Pan troglodytes]
          Length = 2944

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 102/189 (53%), Gaps = 22/189 (11%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD 156
             ++G      +  P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD
Sbjct: 2478 GIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGD 2537

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G+RGP+G  G  GP+G  GD G +G KG+ G  G  GL G  GLPG        G+ G 
Sbjct: 2538 MGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLPGP------QGQPGA 2591

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV---------------PGT 261
             GIPG  G PGKDG+PG  G  G+ G  GPRG +G+ G+ G                PG 
Sbjct: 2592 AGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGR 2651

Query: 262  PAICAYKRE 270
            P +  +K E
Sbjct: 2652 PGLAGHKGE 2660



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 98/179 (54%), Gaps = 21/179 (11%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQG---- 152
            +G      E  P GL G  G +G+ G  G+ G KGE G+KG+   PG+ G PGPQG    
Sbjct: 2532 RGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLPGPQGQPGA 2591

Query: 153  --IPGDEGK---------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
              IPGD G          RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G 
Sbjct: 2592 AGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGP 2648

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG PGL G  G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G  G PG
Sbjct: 2649 PGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 2707



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 94/209 (44%), Gaps = 61/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                    PG   
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGARE 1717

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGL 195
            +G PGD G+ GP+G  G PG  G PG+ G                RGP G+ G  G  GL
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGLRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------KDGI 231
            DGR GL G+PG  G  G NG  G    PG+DGLPG                     +DG 
Sbjct: 1778 DGRSGLDGKPGAPGPSGPNGAAGKAGDPGRDGLPGLRGEQGLSGPSGPPGLPGKPGEDGK 1837

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG NG NGE G  G  G +G+ G +G  G
Sbjct: 1838 PGLNGKNGEPGDPGEDGRKGEKGDSGASG 1866



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 82/176 (46%), Gaps = 38/176 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG  G      P G PG  G +G  G+ G PG  
Sbjct: 2617 GFMGPRGLKGERGVKGACGLDGEKGDKGEAG------PPGRPGLAGHKGEMGEPGVPGQS 2670

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMD------------ 217
            G PG EG  GPKGD G+ G+ G  G  G  GE   PG+ G PG +G D            
Sbjct: 2671 GAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIRGFPGPSGNDGSAGPPGPPGSV 2730

Query: 218  ---------------GIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                           G PG+   G PG  G PG  G  G  G  GPRG +G++ + 
Sbjct: 2731 GPRGPEGLQGQKGERGPPGERVVGDPGAPGAPGERGEQGRPGPAGPRGEKGEAALT 2786



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 78/141 (55%), Gaps = 12/141 (8%)

Query: 133  KGERG--EKGAPGVVGPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPK 184
            KGE+G  E GAPG+   PG  G PG++G RGP      KGD G+PGP G  G++G+RGP 
Sbjct: 1444 KGEKGDSEDGAPGL---PGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP 1500

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  
Sbjct: 1501 GPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDV 1559

Query: 245  GPRGNRGKSGINGVPGTPAIC 265
            GP G RG +G+ G  G P + 
Sbjct: 1560 GPAGPRGATGVQGERGPPGLV 1580



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 94/255 (36%), Gaps = 106/255 (41%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G+ G  G +GE G KGERGE+G                           PG+ 
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG +G +GPKGD G PG +G  G+ G RG  G+ G PG  G+ G +
Sbjct: 2105 GEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGVAGPE 2164

Query: 200  ---------------------------------------GLPGEPGLDGIPGRN------ 214
                                                   GL GEPG  G PGR       
Sbjct: 2165 GKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTG 2224

Query: 215  -----------------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                                         G  G PG+DG  GKDG  G+ G  G  G+ G
Sbjct: 2225 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPG 2284

Query: 246  PRGNRGKSGINGVPG 260
            P G +G+ G  G PG
Sbjct: 2285 PVGPKGEPGPTGAPG 2299



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 82/175 (46%), Gaps = 33/175 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRGPKGD 165
            G QGP G++G IG  GE G+KG+RG+ G       A G  GPPGP G+ G+ GK    G 
Sbjct: 1985 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGK---PGI 2041

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL-----------------------P 202
             G PG  G  G+ G+ G +G+ G  G  G  GRDG                        P
Sbjct: 2042 PGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGP 2101

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G PG  G  G PG DG  G  G  G  G  G++G  GPRG  G  G+ G
Sbjct: 2102 GLSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPG 2156



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 85/205 (41%), Gaps = 72/205 (35%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--------------- 157
            GL GP G+KGE G  GE G  GE G+KGA      PGP+G  GD                
Sbjct: 2333 GLPGPRGEKGEAGRAGEPGDPGEDGQKGA------PGPKGFKGDPGVGVPGSPGPPGPPG 2386

Query: 158  --------------------GKRGPKGDMGYPGP---QGIPGDEGKR------------- 181
                                G+ GP+G+MG PGP   +G+ G  G+              
Sbjct: 2387 VKGDLGLPGPPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPG 2446

Query: 182  --------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                    G KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG
Sbjct: 2447 SVGPPGASGLKGDKGDPG-------AGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPG 2499

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGV 258
            + G  GEKG  G  G +G  G + V
Sbjct: 2500 SRGERGEKGDVGSAGLKGDKGDSAV 2524



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 83/193 (43%), Gaps = 52/193 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++G+P         G VGP   PGP G PG    
Sbjct: 2244 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2303

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG  G+ GD  G+ G KGD G PG  G  G  G  GEP   G PG +G 
Sbjct: 2304 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP---GDPGEDGQ 2358

Query: 217  DGIPGKDGLPG--------------------------------KDGIPGTNGTNGEKGMT 244
             G PG  G  G                                  G PG  G  GE G  
Sbjct: 2359 KGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGPPGAPGVVGFPGQTGPRGEMGQP 2418

Query: 245  GPRGNRGKSGING 257
            GP G RG +G  G
Sbjct: 2419 GPSGERGLAGPPG 2431



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 94/238 (39%), Gaps = 87/238 (36%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------ 148
            G      E   PG  G  G+KG+ GA G  G  G +GE+GAPG++GP             
Sbjct: 1839 GLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPP 1898

Query: 149  -----------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG------------------ 179
                       GP+G   D G+ G KG+ G PG +G+ G+ G                  
Sbjct: 1899 GQGFPGVPGGTGPKG---DRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASA 1955

Query: 180  ---------------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------- 208
                                 +RGPKGD G  G  G +G  G PGE GL           
Sbjct: 1956 LREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQG 2015

Query: 209  ---------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                     G PG +G+ G PGK G+P   G+PG  G  GE G  G RG RG+ G  G
Sbjct: 2016 PPGLALGERGPPGPSGLAGEPGKPGIP---GLPGRAGGVGEAGRPGERGERGEKGERG 2070



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 94/248 (37%), Gaps = 99/248 (39%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
            P + GP G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD             
Sbjct: 1547 PAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1606

Query: 157  --------------------------EGKRGPKGD------------MGYPGPQGIPGDE 178
                                      +G+ G KGD             G  G +G PG  
Sbjct: 1607 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGL 207
            G  G KGD G PG    DGR+G P                               GEPG 
Sbjct: 1667 GPVGEKGDQGDPGE---DGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGD 1723

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGI 255
             G  G  G  G PG  G PG+ GI G              G  GEKG  GP G  G+SG+
Sbjct: 1724 RGQEGPRGPKGDPGLPGAPGERGIEGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGL 1783

Query: 256  NGVPGTPA 263
            +G PG P 
Sbjct: 1784 DGKPGAPG 1791



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 63/120 (52%), Gaps = 29/120 (24%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1250 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGR 1306

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-IGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG++G RGPKG+ G PG+ IG +G  GLPG
Sbjct: 1307 PGSPGRPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEPGAPGQVIGGEG-PGLPG 1365



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 74/157 (47%), Gaps = 29/157 (18%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGP------- 147
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG   ++GP       
Sbjct: 2629 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2688

Query: 148  --PGPQGIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRGPKGDMGYP 190
              PGP+G  G++G+RG  G  G+PGP G                 G EG +G KG+ G P
Sbjct: 2689 GQPGPKGDQGEKGERGTPGIRGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPP 2748

Query: 191  GR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G   +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 2749 GERVVGDPGAPGAPGERGEQGRPGPAGPRGEKGEAAL 2785



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 94/255 (36%), Gaps = 101/255 (39%)

Query: 106  TKEYCPPGL------------QGPIGQKGEIGAKGEMGVKGERGEKGAPGV--------- 144
            + E  PPGL            QGP G +G  G KG+ G  G RG+ G PG+         
Sbjct: 2104 SGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGVAGP 2163

Query: 145  ------------------------------------VGPPGPQGIPGDEGKRGPKGDMGY 168
                                                 GP G +G PG+ G  G     G 
Sbjct: 2164 EGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPG----RGL 2219

Query: 169  PGP------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGL 207
             GP                  QG PG  G+ G  G  G PGR G  G+D   G PG PG 
Sbjct: 2220 TGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGS 2279

Query: 208  DGIPGRNGMDGIPGKDGLPGKD--GIPGTN-----------------GTNGEKGMTGPRG 248
             G+PG  G  G PG  G PG+   G+PG                   G  G++G+ GPRG
Sbjct: 2280 PGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRG 2339

Query: 249  NRGKSGINGVPGTPA 263
             +G++G  G PG P 
Sbjct: 2340 EKGEAGRAGEPGDPG 2354



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 84/247 (34%), Gaps = 99/247 (40%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------------------- 144
            GP G +GE G+KGE G+ GERG +G PG                                
Sbjct: 1910 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 1969

Query: 145  -----------------VGPP---GPQGIPGDEGKR----------------------GP 162
                              GPP   GP G PG+ G +                      GP
Sbjct: 1970 FLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2029

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------- 208
             G  G PG  GIPG  G+ G  G+ G PG  G  G  G  GE G D              
Sbjct: 2030 SGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGP 2089

Query: 209  ------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                        G+ G  G  G+ G  G PG DG  G  G  G  G+ G RG  G  G +
Sbjct: 2090 PGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQD 2149

Query: 257  GVPGTPA 263
            G PG P 
Sbjct: 2150 GNPGLPG 2156



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 70/151 (46%), Gaps = 30/151 (19%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G   S  E  P G  G IG KG+ G  G +G  GE+GE+G P   GP G +G+PG  
Sbjct: 1456 GLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP---GPAGSRGLPGVA 1512

Query: 158  G---------------KRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYPG 191
            G               ++G KG+ G P           GP+G  GD G  GP+G  G  G
Sbjct: 1513 GRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQG 1572

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
              G  G   LPG+PG  G PG  G  G+ G+
Sbjct: 1573 ERGPPGLV-LPGDPGPKGDPGDRGPIGLTGR 1602



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 76/183 (41%), Gaps = 63/183 (34%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP--------QGI--------- 153
            P G +G  G KGE G  GE G++GE      PG V    P         GI         
Sbjct: 1911 PKGDRGETGSKGEQGLPGERGLRGE------PGSV----PNVDRLLETAGIKASALREIV 1960

Query: 154  -----------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD------ 196
                       P  E +RGPKGD G    QG PG EG       +G+PG  GL       
Sbjct: 1961 ETWDESSGSFLPVPERRRGPKGDSGE---QGPPGKEGP------IGFPGERGLKGDRGDP 2011

Query: 197  ----------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                      G  G PG  GL G PG+ G+ G+PG+ G  G+ G PG  G  GEKG  G 
Sbjct: 2012 GPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGE 2071

Query: 247  RGN 249
            +G 
Sbjct: 2072 QGR 2074



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 85/193 (44%), Gaps = 47/193 (24%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            ++GP G+KG+   +G  G+ G  G  G PG  GP GP G           G  G PG  G
Sbjct: 1762 VRGPAGEKGD---RGPPGLDGRSGLDGKPGAPGPSGPNGA---------AGKAGDPGRDG 1809

Query: 174  IPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            +PG  G++G  G  G P         G+ GL+G++G PG+PG D   GR G  G  G  G
Sbjct: 1810 LPGLRGEQGLSGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGED---GRKGEKGDSGASG 1866

Query: 225  LPGKDGIPGTNGTNG-----------------------EKGMTGPRGNRGKSGINGVPGT 261
              G+DG  G  G  G                         G TGP+G+RG++G  G  G 
Sbjct: 1867 REGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGL 1926

Query: 262  PAICAYKRESCSL 274
            P     + E  S+
Sbjct: 1927 PGERGLRGEPGSV 1939



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 73/191 (38%), Gaps = 69/191 (36%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPG 149
            +G    + E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG
Sbjct: 1978 RGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPG 2037

Query: 150  PQGIPGDEGKRGPKGDMGYPG--------------------------------------- 170
              GIPG  G+ G  G+ G PG                                       
Sbjct: 2038 KPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVD 2097

Query: 171  -----------PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                       P G+ G +G+      +GPKGD G P   G+ G  G PG  G DG PG 
Sbjct: 2098 EPGPGLSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVP---GIKGDRGEPGPRGQDGNPGL 2154

Query: 214  NGMDGIPGKDG 224
             G  G+ G +G
Sbjct: 2155 PGERGVAGPEG 2165



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 41/102 (40%), Gaps = 30/102 (29%)

Query: 183  PKGDMGYPGRIGLDGR------------------------------DGLPGEPGLDGIPG 212
            PKG  G PG +GL G+                               G PG  G  G PG
Sbjct: 1252 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPG 1311

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            R G  G PG  GL G  G+PG  G  GE+G  GP+G  G  G
Sbjct: 1312 RPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEPGAPG 1353


>gi|355759734|gb|EHH61676.1| hypothetical protein EGM_19712, partial [Macaca fascicularis]
          Length = 2912

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 101/192 (52%), Gaps = 28/192 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD 156
             ++G      +  P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G    
Sbjct: 2450 GVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGTAGLKGDKGDSAVILGPPGPRGA--- 2506

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GR 213
                  KGDMG  GP+G+ GD+G RG  GD G  G  G  G  G  G PGL G+P   G+
Sbjct: 2507 ------KGDMGERGPRGLDGDKGPRGDSGDPGDKGSKGEPGDKGSAGSPGLRGLPGPQGQ 2560

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV--------------- 258
             G  GIPG  G PGKDG+PG  G  G+ G  GPRG +G+ G+ G                
Sbjct: 2561 PGAAGIPGDPGSPGKDGVPGIRGGKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGP 2620

Query: 259  PGTPAICAYKRE 270
            PG P +  +K E
Sbjct: 2621 PGRPGLAGHKGE 2632



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 97/179 (54%), Gaps = 21/179 (11%)

Query: 100  QGFCNSTKEYCPPGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---- 152
            +G      E  P GL   +GP G  G+ G KG  G  G++G  G+PG+ G PGPQG    
Sbjct: 2504 RGAKGDMGERGPRGLDGDKGPRGDSGDPGDKGSKGEPGDKGSAGSPGLRGLPGPQGQPGA 2563

Query: 153  --IPGDEGK---------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
              IPGD G          RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G 
Sbjct: 2564 AGIPGDPGSPGKDGVPGIRGGKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGP 2620

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG PGL G  G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G  G PG
Sbjct: 2621 PGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 2679



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 95/204 (46%), Gaps = 55/204 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------GP----QGIPG 155
            PG++GP+G+KG  G  G  G  G  G  G+ G  G P            GP    +G PG
Sbjct: 1635 PGVRGPVGEKGNQGDPGADGQNGSPGPSGSKGDRGEPSSHWPFPPQVDIGPGAREKGEPG 1694

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGLDGRDG 200
            D G+ GP+G  G PG  G PGD G                RGP G+ G  G  GLDGR G
Sbjct: 1695 DRGQEGPRGPKGDPGLPGAPGDRGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSG 1754

Query: 201  LPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------KDGIPGTNG 236
            L G+PG  G PG NG  G    PG+DGLPG                     +DG PG NG
Sbjct: 1755 LDGKPGASGPPGLNGAAGKAGDPGRDGLPGLRGEQGPPGPSGSPGLPGKPGEDGKPGLNG 1814

Query: 237  TNGEKGMTGPRGNRGKSGINGVPG 260
             NGE G  G  G +G+ G +G PG
Sbjct: 1815 KNGEPGDPGEDGRKGEKGDSGAPG 1838



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 78/141 (55%), Gaps = 12/141 (8%)

Query: 133  KGERG--EKGAPGVVGPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPK 184
            KGE+G  E GAPG+   PG  G PG++G RGP      KGD G+PGP G  G++G+RGP 
Sbjct: 1416 KGEKGDSEDGAPGL---PGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP 1472

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  
Sbjct: 1473 GPAGSRGLPGVAGRPGAEGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDV 1531

Query: 245  GPRGNRGKSGINGVPGTPAIC 265
            GP G RG +G+ G  G P + 
Sbjct: 1532 GPAGPRGATGVQGERGAPGLV 1552



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 59/108 (54%), Gaps = 9/108 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG  G      P G PG  G +G  G+ G PG  
Sbjct: 2589 GFMGPRGLKGERGVKGACGLDGEKGDKGEAG------PPGRPGLAGHKGEMGEPGVPGQS 2642

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMD 217
            G PG EG  GPKGD G+ G+ G  G  G  GE   PG+ G PG  G D
Sbjct: 2643 GAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPRGSD 2690



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 102/247 (41%), Gaps = 83/247 (33%)

Query: 112  PGLQGPIGQKGEIGAKGE-----MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PGL GP+G KGE G  G      +G+ G +GEKGAPG     +VG PG +G  G  G RG
Sbjct: 2252 PGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRG 2311

Query: 162  PKGDMGYPGPQGIPGDEGKRGP------KGDMG--------------------------- 188
             KG+ G  G  G PG++G++G       KGD G                           
Sbjct: 2312 EKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGLPGPPGVKGDLGLPGPPGA 2371

Query: 189  -----YPGRIGLDGRDGLP---GEPGLDGIPGRN-------------------------- 214
                 +PG+ G  G  G P   GE GL G PGR                           
Sbjct: 2372 PGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPGPPGSVGPPGASGLKGD 2431

Query: 215  ------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                  G+ G  G+ G PG  G  G  G  G +G+TGP G+RG+ G  G  GT  +   K
Sbjct: 2432 KGDPGAGLPGPRGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGTAGLKGDK 2491

Query: 269  RESCSLL 275
             +S  +L
Sbjct: 2492 GDSAVIL 2498



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
               K  C  GL G  G KGE G  G  G+ G +GE G PGV   PG  G PG EG  GPK
Sbjct: 2600 RGVKGAC--GLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGV---PGQSGAPGKEGLIGPK 2654

Query: 164  GDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
            GD G+   PGP+G  G++G+RG  G  G+PG  G D
Sbjct: 2655 GDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPRGSD 2690



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 75/154 (48%), Gaps = 34/154 (22%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G +G+ G+ GA G  G  G+ G++G+PGV                        PG 
Sbjct: 2216 PGLPGQVGETGKPGAPGRDGAGGKDGDRGSPGV------------------------PGS 2251

Query: 172  QGIPGDEGKRGPKGDMGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---G 221
             G+PG  G +G  G  G PG+  +GL G  G  G PG     L G PG  G  G+P   G
Sbjct: 2252 PGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRG 2311

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            + G  G+ G PG  G +G+KG  GP+G +G  G+
Sbjct: 2312 EKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGV 2345



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 27/119 (22%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGE+G  GA G 
Sbjct: 1222 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSAIAKGEKGFPGADGR 1278

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG++G RGPKG+ G PG+I      GLPG
Sbjct: 1279 PGSPGRPGTPGTPGAPGLKGSPGLPGPRGEPGEQGPRGPKGEPGAPGQITGGEGPGLPG 1337



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 59/121 (48%), Gaps = 32/121 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG------------------------APGVV-- 145
            PG  G +G+ G  G +GE G KGERGE+G                         PG    
Sbjct: 2017 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGSPGLPGPPGPKVSVDGPGPALS 2076

Query: 146  ---GPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
               GPPG    +G PG +G RGPKGD G PG +G  G+ G RG  G++G PG  G+ G +
Sbjct: 2077 GEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDRGEPGPRGQDGNLGLPGERGVAGPE 2136

Query: 200  G 200
            G
Sbjct: 2137 G 2137



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 94/243 (38%), Gaps = 93/243 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
            P + GP G+KG++G  G  G  G +GE+GAPG+V  G PGP+G PGD             
Sbjct: 1519 PAVAGPKGEKGDVGPAGPRGATGVQGERGAPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1578

Query: 157  --------------------------EGKRGPKGD---------MGYPGPQGIPGDEGKR 181
                                      +G+ G KGD          G  G +G+ G  G R
Sbjct: 1579 GDSGPPGEKGDPGRSGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1638

Query: 182  GPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGLDGI 210
            GP G+ G  G  G DG++G P                               GEPG  G 
Sbjct: 1639 GPVGEKGNQGDPGADGQNGSPGPSGSKGDRGEPSSHWPFPPQVDIGPGAREKGEPGDRGQ 1698

Query: 211  PGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGINGV 258
             G  G  G PG  G PG  GI G              G  GEKG  GP G  G+SG++G 
Sbjct: 1699 EGPRGPKGDPGLPGAPGDRGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGK 1758

Query: 259  PGT 261
            PG 
Sbjct: 1759 PGA 1761



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 87/214 (40%), Gaps = 77/214 (35%)

Query: 106  TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            + E  PPGL+G         AKGE G  G+RG KG  GV   PG +G  G+ G RG  G+
Sbjct: 2076 SGEQGPPGLKG---------AKGEPGSDGDRGPKGDRGV---PGIKGDRGEPGPRGQDGN 2123

Query: 166  MGYPGPQGIPGDEGK---------------------------------RGPKGDMGYPGR 192
            +G PG +G+ G EGK                                 +GP G  G PG 
Sbjct: 2124 LGLPGERGVAGPEGKPGLQGPRGPPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGE 2183

Query: 193  --------------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                                      +G  G  GLPG+ G  G P      G PG+DG  
Sbjct: 2184 TGPPGRGLPGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKP------GAPGRDGAG 2237

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GKDG  G+ G  G  G+ GP G +G+ G  G PG
Sbjct: 2238 GKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPG 2271



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 86/187 (45%), Gaps = 35/187 (18%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            ++GP G+KG+   +G  G+ G  G  G PG  GPP   G+ G  GK G  G  G PG +G
Sbjct: 1734 VRGPAGEKGD---RGPPGLDGRSGLDGKPGASGPP---GLNGAAGKAGDPGRDGLPGLRG 1787

Query: 174  ---------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
                            PG++GK G  G  G PG  G DGR    GE G  G PGR G DG
Sbjct: 1788 EQGPPGPSGSPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRK---GEKGDSGAPGREGRDG 1844

Query: 219  IPGKDGLPG-----------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
              G+ G+PG               P   G  G  G TGP+G+RG++G  G  G P     
Sbjct: 1845 PKGERGVPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLPGERGL 1904

Query: 268  KRESCSL 274
            + E  S+
Sbjct: 1905 RGEPGSV 1911



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 49/88 (55%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG  G  GP+G  G +
Sbjct: 2601 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2660

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            G+ GPKGD G  G +G PG  G  GP+G
Sbjct: 2661 GQPGPKGDQGEKGERGTPGIGGFPGPRG 2688



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 88/242 (36%), Gaps = 85/242 (35%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER------------------- 136
            L    G         PPG  GP G +G  G  GE G KGER                   
Sbjct: 1429 LPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPG 1488

Query: 137  --------------GEKGAPG------VVGP--PGPQGIPGDEGKRGPKGDMGYPGPQGI 174
                          GEKG PG      VVGP   GP+G  GD G  GP+G  G  G +G 
Sbjct: 1489 AEGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGA 1548

Query: 175  PG--DEGKRGPKGDMGYPGRIGLDGR------------------------------DGLP 202
            PG    G  GPKGD G  G IGL GR                              DG  
Sbjct: 1549 PGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRSGPPGPVGPRGRDGEV 1608

Query: 203  GEPGLD------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            GE G +            G  G  G  G+ G  G  G  G PG +G NG  G +G +G+R
Sbjct: 1609 GEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGNQGDPGADGQNGSPGPSGSKGDR 1668

Query: 251  GK 252
            G+
Sbjct: 1669 GE 1670



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 42/102 (41%), Gaps = 27/102 (26%)

Query: 183  PKGDMGYPGRIGLDGR---------------------------DGLPGEPGLDGIPGRNG 215
            PKG  G PG +GL G+                            G  G PG DG PG  G
Sbjct: 1224 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSAIAKGEKGFPGADGRPGSPG 1283

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G PG  G PG  G PG  G  GE G  GPRG +G+ G  G
Sbjct: 1284 RPGTPGTPGAPGLKGSPGLPGPRGEPGEQGPRGPKGEPGAPG 1325



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 79/238 (33%), Gaps = 105/238 (44%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYPG----------- 170
            G  G+ G+ G+ GE G PG  G  G +   G PG EG+ GPKG+ G PG           
Sbjct: 1805 GEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGRDGPKGERGVPGILGPQGPPGLP 1864

Query: 171  ---------------PQGIPGDEGKRGPKGDMGYPGRIGLDG------------------ 197
                             G  GD G+ G KG+ G PG  GL G                  
Sbjct: 1865 GPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIK 1924

Query: 198  ------------------------RDGLPGEPGLDGIPGRNGMDGIPGKDGL-------- 225
                                    R G  G+PG  G PG+ G  G PG+ GL        
Sbjct: 1925 VSALREIVETWDESSGSFLPVPERRRGPKGDPGERGSPGKEGPIGFPGERGLKGDRGDPG 1984

Query: 226  --------------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                                      PG  G+PG  G  GE G  G RG RG+ G  G
Sbjct: 1985 PQGPPGLALGERGPPGPPGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERG 2042



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 69/183 (37%), Gaps = 72/183 (39%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER-------------------------------GEKG 140
            PG +G  G++G IG  GE G+KG+R                               G  G
Sbjct: 1956 PGERGSPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPG 2015

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGY---------------------------PGP-- 171
             PG  G  G  G PG+ G+RG KG+ G                            PGP  
Sbjct: 2016 LPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGSPGLPGPPGPKVSVDGPGPAL 2075

Query: 172  ------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                        +G PG +G RGPKGD G PG  G  G  G  G+ G  G+PG  G+ G 
Sbjct: 2076 SGEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDRGEPGPRGQDGNLGLPGERGVAGP 2135

Query: 220  PGK 222
             GK
Sbjct: 2136 EGK 2138


>gi|297478352|ref|XP_002690048.1| PREDICTED: uncharacterized protein LOC282195 [Bos taurus]
 gi|296484297|tpg|DAA26412.1| TPA: collagen, type IX, alpha 1 [Bos taurus]
          Length = 940

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/160 (50%), Positives = 96/160 (60%), Gaps = 18/160 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYP 169
           G QGP G +G    +G  GV GE+GEKGA G+ G PGPQG+   PGD+G+RGP G++G  
Sbjct: 478 GAQGPPGAQG---LRGITGVAGEKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPK 534

Query: 170 ---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------GMDGIP 220
              GPQG PG  G  GPKGD G P   G+DGRDG+PG PG  G PG+       G+ G+P
Sbjct: 535 GDRGPQGSPGIPGLPGPKGDTGLP---GVDGRDGIPGMPGTKGEPGKPGPPGEAGLQGLP 591

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  GLPG  G+ G  G  G  G  G  GN GK G  G PG
Sbjct: 592 GIPGLPGAKGVAGEKGNTGAPGKPGQLGNSGKPGRQGPPG 631



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 95/175 (54%), Gaps = 18/175 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G++G+ G  GE+G +G  G +G  G+ G      + G++G++G +G  G PGP
Sbjct: 459 PGTPGADGEEGDQGGLGEVGAQGPPGAQGLRGITG------VAGEKGEKGARGLDGEPGP 512

Query: 172 QGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           QG+PG   D+G+RGP      PG IG  G  G  G PG+ G+PG  G  G+PG DG   +
Sbjct: 513 QGLPGAPGDQGQRGP------PGEIGPKGDRGPQGSPGIPGLPGPKGDTGLPGVDG---R 563

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
           DGIPG  GT GE G  GP G  G  G+ G+PG P       E  +     +  QL
Sbjct: 564 DGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGLPGAKGVAGEKGNTGAPGKPGQL 618



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 86/176 (48%), Gaps = 24/176 (13%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGV 144
           QG         PPG QG  G  G  G KGE G +G               ++G++G PG 
Sbjct: 471 QGGLGEVGAQGPPGAQGLRGITGVAGEKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGE 530

Query: 145 VGPPG---PQGIPGDEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
           +GP G   PQG PG  G  GPKGD G P   G  GIPG  G +G  G  G PG  GL G 
Sbjct: 531 IGPKGDRGPQGSPGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGEAGLQGL 590

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G+PG PG  G+ G  G  G PGK G  G  G PG  G  GE    GPRG RG SG
Sbjct: 591 PGIPGLPGAKGVAGEKGNTGAPGKPGQLGNSGKPGRQGPPGE---VGPRGPRGLSG 643



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 12/87 (13%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGK 180
           E G  G+MG++G  G KG PG +G  GP+G  G+ G RGP  +G  G PG  G+PGD G 
Sbjct: 824 ENGFPGQMGLRGLPGMKGPPGALGVRGPKGDAGERGDRGPPGRGPKGLPGAPGLPGDPG- 882

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                    P   G +GRDG  G PG+
Sbjct: 883 ---------PASYGRNGRDGERGPPGV 900



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 51/97 (52%), Gaps = 20/97 (20%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G  G+ G +G PG+ GPPG  G+      RGPKGD G  G +G PG    RGPKG   
Sbjct: 824 ENGFPGQMGLRGLPGMKGPPGALGV------RGPKGDAGERGDRGPPG----RGPKG--- 870

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                 L G  GLPG+PG     GRNG DG  G  G+
Sbjct: 871 ------LPGAPGLPGDPGPASY-GRNGRDGERGPPGV 900



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG  G RG  G  G PG +G+ G  G  GE G  G PGR G  G+PG  GLPG  G  
Sbjct: 826 GFPGQMGLRGLPGMKGPPGALGVRGPKGDAGERGDRGPPGR-GPKGLPGAPGLPGDPGPA 884

Query: 233 --GTNGTNGEKGMTG 245
             G NG +GE+G  G
Sbjct: 885 SYGRNGRDGERGPPG 899



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 95/250 (38%), Gaps = 78/250 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGPQGIPGD 156
           PGL GP G  G  G  G  G+ G               E G +G PG+ G PG +G+ G+
Sbjct: 546 PGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGLPGAKGVAGE 605

Query: 157 E------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG---------------------- 188
           +      GK G  G+ G PG QG PG+ G RGP+G  G                      
Sbjct: 606 KGNTGAPGKPGQLGNSGKPGRQGPPGEVGPRGPRGLSGSRGEVGPVGPPGPPGKLGSLGS 665

Query: 189 --------YPGRIGLDGRDGLPGEPGLDGIPGRNGMD------------GIPGKDGLPGK 228
                    PG  G+ G  G+ GEPG  G  G +G +            G+PG  G  G 
Sbjct: 666 PGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGN 725

Query: 229 DGIPGTNGTNGEKGMT---------------GPRGNRGKSGINGVPGTPAICAYKRESCS 273
            G PG  G  G +G+                G +G  G  GI G PG      + ++ C 
Sbjct: 726 PGEPGVRGPEGSRGLPGEEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCM 785

Query: 274 LLPNSETSQL 283
            +     +Q+
Sbjct: 786 RVIQEHFAQM 795



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 83/217 (38%), Gaps = 77/217 (35%)

Query: 121 KGEIGAKGEMGVKGERGEKGAP------------GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           KG+ G  GE G KGE+G  G              G+ GP G  G PG+ G RGP+G  G 
Sbjct: 681 KGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGVRGPEGSRGL 740

Query: 169 PGPQG---------IPGDEGKRGPKGDMGYPGRIGLD----------------------- 196
           PG +G         + G++G  G  G  G PGR   D                       
Sbjct: 741 PGEEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVIQEHFAQMAASLK 800

Query: 197 ----------------------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
                                 G +G PG+ GL G+PG  G          PG  G+ G 
Sbjct: 801 RPDSGASGLPGLPGPPGPPGPPGENGFPGQMGLRGLPGMKGP---------PGALGVRGP 851

Query: 235 NGTNGEKGMTGP--RGNRGKSGINGVPGTPAICAYKR 269
            G  GE+G  GP  RG +G  G  G+PG P   +Y R
Sbjct: 852 KGDAGERGDRGPPGRGPKGLPGAPGLPGDPGPASYGR 888


>gi|5921191|sp|Q05722.2|CO9A1_MOUSE RecName: Full=Collagen alpha-1(IX) chain; Flags: Precursor
 gi|987667|dbj|BAA04463.1| alpha 1 type IX collagen chain [Mus musculus]
          Length = 921

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 104/189 (55%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G  G PGPQGIPG   D+G+RGP      KGD G  G +GIPG  G   PKGD G PG
Sbjct: 485 ARGFDGEPGPQGIPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSPG---PKGDTGLPG 541

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              +DGRDG+PG PG  G  G+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G
Sbjct: 542 ---VDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPG 598

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 599 QLGSSGKPG 607



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/162 (43%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G+ G  G +G+ G  GE G KG+RG +G+ G+ G P            GPKGD G
Sbjct: 491 EPGPQGIPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG +GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG  G  G PG P 
Sbjct: 599 QLGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPG 640



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 86/186 (46%), Gaps = 30/186 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR--- 181
           G  G  G+ G RG KGA G +G PG QG  G+EG    +G++G  G QG PG +G R   
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGD---QGELGEVGAQGPPGPQGLRGIT 474

Query: 182 ---------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---- 222
                          G  G  G PG  G  G+ G PGE G  G  G  G  GIPG     
Sbjct: 475 GIVGDKGEKGARGFDGEPGPQGIPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSPGPK 534

Query: 223 --DGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
              GLP   G+DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  +    
Sbjct: 535 GDTGLPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAP 594

Query: 278 SETSQL 283
            +  QL
Sbjct: 595 GKPGQL 600



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 77/148 (52%), Gaps = 6/148 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG-- 155
            + G      +  PPG  GP G +G  G++G  G  G +G+ G PGV G  G  G+PG  
Sbjct: 496 GIPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSPGPKGDTGLPGVDGRDGIPGMPGTK 555

Query: 156 -DEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            + GK GP GD+G    PG  GIPG +G  G KG+ G PG+ G  G  G PG+ G  G  
Sbjct: 556 GEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKPGQQGPPGEV 615

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           G  G  G+PG  G  G +G PG  G  G
Sbjct: 616 GPRGPRGLPGSRGPVGPEGSPGIPGKLG 643



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 84/175 (48%), Gaps = 21/175 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E   PG  G +G +G  G  G  G KG  GEKG  G  G PG  G  G  
Sbjct: 547 GIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKP 606

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG------------------LDGRD 199
           G++GP G++G  GP+G+PG  G  GP+G  G PG++G                  + G  
Sbjct: 607 GQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDR 666

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRG 251
           G+ GEPG  G  G +G +G  G  G  G  G PG  G+    GE G+ GP G RG
Sbjct: 667 GVFGEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGIRG 721



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 77/176 (43%), Gaps = 54/176 (30%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   ++G  G+ G++G PG VGP GP+G+PG  G  GP+G  G 
Sbjct: 579 PGAKGVAGEKGNTGAPGKPGQLGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGI 638

Query: 169 PGP------------------------------------QGIPGDEGKRGPKGDMGYPGR 192
           PG                                     QG  G+EG+ G +GD+G  G+
Sbjct: 639 PGKLGSVGSPGLPGLPGPPGLPGMKGDRGVFGEPGPKGEQGASGEEGEAGARGDLGDMGQ 698

Query: 193 IGLDGRDGLPGEPGLDGIPGRNG---------------MDGIPGKDGLPGKDGIPG 233
            G  G  G PGEPGL G  G  G               M G  G  GLPG  G PG
Sbjct: 699 PGPKGSVGNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGMQGEQGATGLPGIQGPPG 754



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 83/171 (48%), Gaps = 18/171 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  G+ G+ G  G++G++G  G  G PG  G  G +G  G  GK G  G  G PG 
Sbjct: 549 PGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKPGQ 608

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------LDGIPGR 213
           QG PG+ G RGP+G  G  G +G +G  G+PG+ G                  + G  G 
Sbjct: 609 QGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDRGV 668

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G+ G  G++G  G  G  G+ G  GP+G+ G  G  G+ G   I
Sbjct: 669 FGEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGI 719



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 70/144 (48%), Gaps = 39/144 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMG------------------VKGERGEKGAPGVVGPPGPQGI 153
           PG +GP+G +G  G  G++G                  +KG+RG  G PG   P G QG 
Sbjct: 624 PGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDRGVFGEPG---PKGEQGA 680

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------E 204
            G+EG+ G +GD+         GD G+ GPKG +G PG  GL G +G+ G          
Sbjct: 681 SGEEGEAGARGDL---------GDMGQPGPKGSVGNPGEPGLRGPEGIRGLPGVEGPRGP 731

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGK 228
           PG  G+ G  G  G+PG  G PG+
Sbjct: 732 PGPRGMQGEQGATGLPGIQGPPGR 755



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G++G+RGP  +G  G PG  G+PGD G       
Sbjct: 812 QMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAIGLPGDPG------- 864

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 865 ---PASYGKNGRDGEQGPPGV 882



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGD+G  G +G PG    RGPKG         
Sbjct: 812 QMGIRGLPGIKGPPGALGL------RGPKGDLGEKGERGPPG----RGPKG--------- 852

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPG+PG     G+NG DG  G  G+
Sbjct: 853 LPGAIGLPGDPGPASY-GKNGRDGEQGPPGV 882


>gi|332215868|ref|XP_003257064.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(VII) chain [Nomascus
            leucogenys]
          Length = 2944

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 101/192 (52%), Gaps = 28/192 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD 156
             ++G      +  P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G    
Sbjct: 2478 GVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGTAGLKGDKGDSAVILGPPGPRGA--- 2534

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GR 213
                  KGDMG  GP+G+ GD+G RG  GD G  G  G  G  G  G PGL G+P   G+
Sbjct: 2535 ------KGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEAGDKGSAGSPGLRGLPGPQGQ 2588

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV--------------- 258
             G  GIPG  G PGKDG+PG  G  G+ G  GPRG +G+ G+ G                
Sbjct: 2589 PGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGP 2648

Query: 259  PGTPAICAYKRE 270
            PG P +  +K E
Sbjct: 2649 PGRPGLAGHKGE 2660



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 97/179 (54%), Gaps = 21/179 (11%)

Query: 100  QGFCNSTKEYCPPGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---- 152
            +G      E  P GL   +GP G  G+ G KG  G  G++G  G+PG+ G PGPQG    
Sbjct: 2532 RGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEAGDKGSAGSPGLRGLPGPQGQPGA 2591

Query: 153  --IPGDEGK---------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
              IPGD G          RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G 
Sbjct: 2592 AGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGP 2648

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG PGL G  G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G  G PG
Sbjct: 2649 PGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 2707



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 100/243 (41%), Gaps = 94/243 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG  GP G++GE+G KG+ G           GERG +GAPGV GP G +G  GD G+ G 
Sbjct: 1624 PGPVGPRGREGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGNQGDPGEDGR 1683

Query: 163  KGDMGYPGPQ-------------------------GIPGDEGK---RGPKGDMGYPGR-- 192
             G  G  GP+                         G PGD G+   RGPKGD G PG   
Sbjct: 1684 NGSPGPSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPG 1743

Query: 193  -------------------------------IGLDGRDGLPGEPGLDGIPGRNGMDGI-- 219
                                            GLDGR GL G+PG  G  G NG  G   
Sbjct: 1744 ERGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAPGPSGPNGAAGKAG 1803

Query: 220  -PGKDGLPG---------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             PG+DGLPG                     +DG PG NG NGE G  G  G +G+ G +G
Sbjct: 1804 DPGRDGLPGLRGEQGPPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSG 1863

Query: 258  VPG 260
             PG
Sbjct: 1864 APG 1866



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 88/190 (46%), Gaps = 46/190 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++G+P         G VGP   PGP G PG    
Sbjct: 2244 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2303

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLD---GI 210
            G  G KG+ G PG  G+ GD  G+ G KGD G P   G  G  GR G PG+PG D   G 
Sbjct: 2304 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGA 2361

Query: 211  PGRNGMD-----------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            PG  G                         G+PG  G PG  G PG  G  GE G  GP 
Sbjct: 2362 PGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGAPGAPGVVGFPGQTGPRGEMGQPGPS 2421

Query: 248  GNRGKSGING 257
            G RG +G  G
Sbjct: 2422 GERGLAGPPG 2431



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 86/236 (36%), Positives = 111/236 (47%), Gaps = 25/236 (10%)

Query: 25   PIISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNP 84
            P  +K ++  R  R +D DKG   DN             D  ++  + E   + S  +  
Sbjct: 2531 PRGAKGDMGERGPRGLDGDKGPRGDNG------------DPGDKGSKGEAGDKGSAGSPG 2578

Query: 85   WVWLNAYSRIPLVA-MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG 143
               L      P  A + G   S  +   PG++G   +KG++G  G  G+KGERG KGA G
Sbjct: 2579 LRGLPGPQGQPGAAGIPGDPGSPGKDGVPGIRG---EKGDVGFMGPRGLKGERGVKGACG 2635

Query: 144  V------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            +       G  GP G PG  G +G  G+ G PG  G PG EG  GPKGD G+ G+ G  G
Sbjct: 2636 LDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKG 2695

Query: 198  RDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
              G  GE   PG+ G PG +G DG  G  G PG  G  G  G  G+KG  GP G R
Sbjct: 2696 DQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGER 2751



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/139 (46%), Positives = 74/139 (53%), Gaps = 2/139 (1%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            KGE G   E G  G PG  G PG QG  G  G  GPKGD G+PGP G  G++G+RGP G 
Sbjct: 1444 KGEKGDS-EDGSPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGP 1502

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  GP
Sbjct: 1503 AGSRGLPGVAGRPGAEGPEGPPGPAGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDVGP 1561

Query: 247  RGNRGKSGINGVPGTPAIC 265
             G RG +G+ G  G P + 
Sbjct: 1562 AGPRGATGVQGERGPPGLV 1580



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 103/232 (44%), Gaps = 54/232 (23%)

Query: 95   PLVAMQGFCNSTKEY-CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            P  A+ G   +  E   P GL G +   GE GAKG+ G+ G RGEKG  G  G PG  G 
Sbjct: 2298 PGQAVVGLPGAKGEKGAPGGLAGDL--VGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGE 2355

Query: 154  PGDEGKRGPKG-----------------------DMGYPGPQGIPGD---EGKRGPKGDM 187
             G +G  GPKG                       D+G PG  G PG     G+ GP+G+M
Sbjct: 2356 DGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGAPGAPGVVGFPGQTGPRGEM 2415

Query: 188  GYPGRIGLDGRDGLPGE---------------------PGLDGIPGRNGMDGIPGKDGLP 226
            G PG  G  G  G PG                       GL G  G +G  G+PG  G  
Sbjct: 2416 GQPGPSGERGLAGPPGREGVPGPLGPPGPPGSVGPPGASGLKGDKGDSGA-GLPGPRGER 2474

Query: 227  GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
            G+ G+ G +G  G+   +G+TGP G+RG+ G  G  GT  +   K +S  +L
Sbjct: 2475 GEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGTAGLKGDKGDSAVIL 2526



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 92/208 (44%), Gaps = 54/208 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRGPKG----- 164
            P + GP G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD G  G  G     
Sbjct: 1547 PAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1606

Query: 165  -------DMGYPGPQGIPGDEGKRGPKGDMGYPG---------RIGLDGRDGLPGEPGLD 208
                   + G PG  G PG  G RG +G++G  G           G  G  GL G PG+ 
Sbjct: 1607 GDSGPPGEKGDPGRPGSPGPVGPRGREGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTN----------------------------GE 240
            G  G  G  G PG+D   G++G PG +G                              G+
Sbjct: 1667 GPVGEKGNQGDPGED---GRNGSPGPSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGD 1723

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +G  GPRG +G  G+ G PG   I   +
Sbjct: 1724 RGQEGPRGPKGDPGLPGAPGERGIDGLR 1751



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 95/208 (45%), Gaps = 56/208 (26%)

Query: 112  PGLQGPIGQKGEIGAKGE-----MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PGL GP+G KGE G  G      +G+ G +GEKGAPG     +VG PG +G  G  G RG
Sbjct: 2280 PGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRG 2339

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--------------GLPGEPGL 207
             KG+ G  G  G PG++G++G  G  G+ G  G+                  GLPG PG 
Sbjct: 2340 EKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGAPGA 2399

Query: 208  DGI---PGRNGMDGIPGKDGLPGKDGIPG------------------------TNGTNGE 240
             G+   PG+ G  G  G+ G  G+ G+ G                         +G  G+
Sbjct: 2400 PGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPGPPGSVGPPGASGLKGD 2459

Query: 241  K-----GMTGPRGNRGKSGINGVPGTPA 263
            K     G+ GPRG RG+ G+ G  G P 
Sbjct: 2460 KGDSGAGLPGPRGERGEPGVRGEDGRPG 2487



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 90/228 (39%), Gaps = 80/228 (35%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------------------- 143
            GL GP G+KGE G  GE G  GE G+KGAPG                             
Sbjct: 2333 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLG 2392

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------------------------ 173
            + G PG  G+ G  G+ GP+G+MG PGP G                              
Sbjct: 2393 LPGAPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPGPPGSVGPPG 2452

Query: 174  ---IPGDEGKRG-----PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
               + GD+G  G     P+G+ G PG  G DGR G  G  GL G PG  G  G  G  G 
Sbjct: 2453 ASGLKGDKGDSGAGLPGPRGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGT 2512

Query: 226  PGKDG----------IPGTNGTNGEKGMTGPR---GNRGKSGINGVPG 260
             G  G           PG  G  G+ G  GPR   G++G  G NG PG
Sbjct: 2513 AGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPG 2560



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 84/164 (51%), Gaps = 16/164 (9%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
               K  C  GL G  G KGE G  G  G+ G +GE G PGV   PG  G PG EG  GPK
Sbjct: 2628 RGVKGAC--GLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGV---PGQSGAPGKEGLIGPK 2682

Query: 164  GDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GD G+   PGP+G  G++G+RG  G  G+PG  G DG  G PG PG  G  G  G+ G  
Sbjct: 2683 GDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQK 2742

Query: 221  GKDGLPGKDGIPGT--------NGTNGEKGMTGPRGNRGKSGIN 256
            G+ G PG+  +            G  G  G  GPRG +G++ + 
Sbjct: 2743 GERGPPGERVVGAPGAPGAPGERGEQGRPGPAGPRGEKGEAALT 2786



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 77/166 (46%), Gaps = 33/166 (19%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEGKRGPKGDMGYPG 170
            E G  G+ G +G RG KG PG+ G PG +GI G              G  G KGD G PG
Sbjct: 1717 EKGEPGDRGQEGPRGPKGDPGLPGAPGERGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPG 1776

Query: 171  ---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------------EPGLDG 209
                 G+ G  G  GP G  G  G+ G  GRDGLPG                  +PG DG
Sbjct: 1777 LDGRSGLDGKPGAPGPSGPNGAAGKAGDPGRDGLPGLRGEQGPPGPSGPPGLPGKPGEDG 1836

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             PG NG +G PG  G  G+ G  G +G  G +G  GP+G  G  GI
Sbjct: 1837 KPGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGRDGPKGEHGAPGI 1882



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 61/134 (45%), Gaps = 44/134 (32%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G++G  G +GE G KGERGE+G                           PG+ 
Sbjct: 2045 PGRAGGVGEEGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG +G RGPKGD G P            G KGD G PG  G DG  
Sbjct: 2105 GEQGPPGLKGAKGEPGSDGDRGPKGDRGVP------------GIKGDRGEPGPRGQDGNP 2152

Query: 200  GLPGEPGLDGIPGR 213
            GLPGE G+ G  G+
Sbjct: 2153 GLPGERGVAGPEGK 2166



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 63/120 (52%), Gaps = 29/120 (24%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1250 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSAIAKGERGFPGADGR 1306

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-IGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG++G RGPKG+ G PG+ IG +G  GLPG
Sbjct: 1307 PGSPGRPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEPGAPGQIIGGEG-PGLPG 1365



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 90/235 (38%), Gaps = 73/235 (31%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER------------------- 136
            L    G         PPG  GP G +G  G  GE G KGER                   
Sbjct: 1457 LPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPG 1516

Query: 137  --------------GEKGAPG------VVGP--PGPQGIPGDEGKRGPKGDMGYPGPQGI 174
                          GEKG PG      VVGP   GP+G  GD G  GP+G  G  G +G 
Sbjct: 1517 AEGPEGPPGPAGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGP 1576

Query: 175  PG--DEGKRGPKGDMGYPGRIGLDGRD---------------GLPGEPGLDGIPGRNGMD 217
            PG    G  GPKGD G  G IGL GR                G PG PG  G  GR G  
Sbjct: 1577 PGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPGPVGPRGREGEV 1636

Query: 218  GIPG------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G            K G  G  G PG  G  GEKG    +G+ G+ G NG PG
Sbjct: 1637 GEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGN---QGDPGEDGRNGSPG 1688



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 86/214 (40%), Gaps = 77/214 (35%)

Query: 106  TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            + E  PPGL+G         AKGE G  G+RG KG  GV   PG +G  G+ G RG  G+
Sbjct: 2104 SGEQGPPGLKG---------AKGEPGSDGDRGPKGDRGV---PGIKGDRGEPGPRGQDGN 2151

Query: 166  MGYPGPQGIPGDEGK---------------------------------RGPKGDMGYPGR 192
             G PG +G+ G EGK                                 +GP G  G PG 
Sbjct: 2152 PGLPGERGVAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGE 2211

Query: 193  --------------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                                      +G  G  GLPG+ G  G P      G PG+DG  
Sbjct: 2212 TGPPGRGLPGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKP------GAPGRDGAS 2265

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GKDG  G+ G  G  G+ GP G +G+ G  G PG
Sbjct: 2266 GKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPG 2299



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 102/281 (36%), Gaps = 132/281 (46%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG  G  GE G  G+PG  GP                    PG   
Sbjct: 1658 GLRGAPGVRGPVGEKGNQGDPGEDGRNGSPGPSGPKGDRGEPGPPGPPGRLVDTGPGARE 1717

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGP---KGDMGYPG- 191
            +G PGD G+ GP+G  G PG  G PG+ G                RGP   KGD G PG 
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777

Query: 192  --RIGLDGRDGLPG------------EPGLDGIPG------------------------- 212
              R GLDG+ G PG            +PG DG+PG                         
Sbjct: 1778 DGRSGLDGKPGAPGPSGPNGAAGKAGDPGRDGLPGLRGEQGPPGPSGPPGLPGKPGEDGK 1837

Query: 213  -----RNGMDGIPGKDGLPGK---DGIPGTNGTNGEKG---------------------- 242
                 +NG  G PG+DG  G+    G PG  G +G KG                      
Sbjct: 1838 PGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGRDGPKGEHGAPGILGPQGPPGLPGPVGP 1897

Query: 243  ----------MTGPRGNRGKSG------------INGVPGT 261
                        GP+G+RG++G            + G PG+
Sbjct: 1898 PGQGFPGVPGGAGPKGDRGETGSKGEQGLPGERGLRGEPGS 1938



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 95/215 (44%), Gaps = 56/215 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGV------------------KGERGEKGAPGVVGPPGPQGIP 154
            G +GP G  G  GA GE G+                   GE+G++G PG+ G  G  G P
Sbjct: 1728 GPRGPKGDPGLPGAPGERGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKP 1787

Query: 155  GDEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLP 202
            G  G  GP G  G    PG  G+PG  G++GP G  G P         G+ GL+G++G P
Sbjct: 1788 GAPGPSGPNGAAGKAGDPGRDGLPGLRGEQGPPGPSGPPGLPGKPGEDGKPGLNGKNGEP 1847

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG----------------------- 239
            G+PG DG  G  G  G PG++   G+DG  G +G  G                       
Sbjct: 1848 GDPGEDGRKGEKGDSGAPGRE---GRDGPKGEHGAPGILGPQGPPGLPGPVGPPGQGFPG 1904

Query: 240  EKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
              G  GP+G+RG++G  G  G P     + E  S+
Sbjct: 1905 VPGGAGPKGDRGETGSKGEQGLPGERGLRGEPGSM 1939



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 74/191 (38%), Gaps = 69/191 (36%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGE-------------------------MGVKG 134
            +G    + E  PPG +GPIG  GE G KG+                          G  G
Sbjct: 1978 RGPKGDSGERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPG 2037

Query: 135  ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG--------------------------- 167
            + G  G PG  G  G +G PG+ G+RG KG+ G                           
Sbjct: 2038 KPGIPGLPGRAGGVGEEGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVD 2097

Query: 168  YPGP--------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             PGP              +G PG +G RGPKGD G P   G+ G  G PG  G DG PG 
Sbjct: 2098 EPGPGLSGEQGPPGLKGAKGEPGSDGDRGPKGDRGVP---GIKGDRGEPGPRGQDGNPGL 2154

Query: 214  NGMDGIPGKDG 224
             G  G+ G +G
Sbjct: 2155 PGERGVAGPEG 2165



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 41/102 (40%), Gaps = 30/102 (29%)

Query: 183  PKGDMGYPGRIGLDGR------------------------------DGLPGEPGLDGIPG 212
            PKG  G PG +GL G+                               G PG  G  G PG
Sbjct: 1252 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSAIAKGERGFPGADGRPGSPG 1311

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            R G  G PG  GL G  G+PG  G  GE+G  GP+G  G  G
Sbjct: 1312 RPGNPGTPGAPGLKGSPGLPGPRGDPGEQGPRGPKGEPGAPG 1353



 Score = 39.3 bits (90), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 74/196 (37%), Gaps = 70/196 (35%)

Query: 115  QGPIGQKGE---IGAKGEMGVKGERGEKG------------------------------- 140
            +GP G  GE    G +G +G  GERG KG                               
Sbjct: 1978 RGPKGDSGERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPG 2037

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-------- 192
             PG+ G PG  G  G+EG+               PG+ G+RG KG+ G  GR        
Sbjct: 2038 KPGIPGLPGRAGGVGEEGR---------------PGERGERGEKGERGEQGRDGPPGLPG 2082

Query: 193  -----------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                       + +D  +  PG  G  G PG  G  G PG DG  G  G  G  G  G++
Sbjct: 2083 TPGPPGPPGPKVSVD--EPGPGLSGEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDR 2140

Query: 242  GMTGPRGNRGKSGING 257
            G  GPRG  G  G+ G
Sbjct: 2141 GEPGPRGQDGNPGLPG 2156


>gi|426340699|ref|XP_004034265.1| PREDICTED: collagen alpha-1(VII) chain [Gorilla gorilla gorilla]
          Length = 3156

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 101/189 (53%), Gaps = 22/189 (11%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD 156
             ++G      +  P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD
Sbjct: 2690 GIRGEDGHPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGD 2749

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G+RGP+G  G  GP+G  GD G +G KG+ G  G  GL G  GLPG        G+ G 
Sbjct: 2750 MGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLPGP------QGQPGA 2803

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV---------------PGT 261
             GIPG  G PGKDG+PG  G  G+ G  GPRG +G+ G+ G                PG 
Sbjct: 2804 AGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGR 2863

Query: 262  PAICAYKRE 270
            P +   K E
Sbjct: 2864 PGLAGQKGE 2872



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 98/179 (54%), Gaps = 21/179 (11%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQG---- 152
            +G      E  P GL G  G +G+ G  G+ G KGE G+KG+   PG+ G PGPQG    
Sbjct: 2744 RGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLPGPQGQPGA 2803

Query: 153  --IPGDEGK---------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
              IPGD G          RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G 
Sbjct: 2804 AGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGP 2860

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG PGL G  G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G+RG+ G  G PG
Sbjct: 2861 PGRPGLAGQKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDRGEKGERGTPG 2919



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 95/209 (45%), Gaps = 61/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                    PG   
Sbjct: 1870 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGPSGPKGDRGEPGPPGPPGRLVDTGPGARE 1929

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGL 195
            +G PGD G+ GP+G  G PG  G PG+ G                RGP G+ G  G  GL
Sbjct: 1930 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGL 1989

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------KDGI 231
            DGR GL G+PG  G  G NG  G    PG+DGLPG                     +DG 
Sbjct: 1990 DGRSGLDGKPGAPGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGK 2049

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG NG NGE G  G  G +G+ G +G PG
Sbjct: 2050 PGLNGKNGEPGDPGEDGRKGEKGDSGAPG 2078



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/141 (46%), Positives = 77/141 (54%), Gaps = 9/141 (6%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG  G      P G PG  G++G  G+ G PG  
Sbjct: 2829 GFMGPRGLKGERGVKGACGLDGEKGDKGEAG------PPGRPGLAGQKGEMGEPGVPGQS 2882

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKD 229
            G PG EG  GPKGD G+ G+ G  G  G  GE   PG+ G PG +G DG  G  G PG  
Sbjct: 2883 GAPGKEGLIGPKGDRGFDGQPGPKGDRGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSV 2942

Query: 230  GIPGTNGTNGEKGMTGPRGNR 250
            G  G  G  G+KG  GP G R
Sbjct: 2943 GPRGPEGLQGQKGERGPPGER 2963



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 78/143 (54%), Gaps = 16/143 (11%)

Query: 133  KGERG--EKGAPGVVGPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPK 184
            KGE+G  E GAPG+   PG  G PG++G RGP      KGD G+PGP G  G++G+RGP 
Sbjct: 1656 KGEKGDSEDGAPGL---PGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP 1712

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI--PGTNGTNGEKG 242
            G  G  G  G+ GR G  G  G  G  GR G  G PG+   PG   +  P   G  GEKG
Sbjct: 1713 GPAGSRGLPGVAGRPGAEGPEGPPGPTGRQGEKGEPGR---PGDTAVVGPAVAGPKGEKG 1769

Query: 243  MTGPRGNRGKSGINGVPGTPAIC 265
              GP G RG +G+ G  G P + 
Sbjct: 1770 DVGPAGPRGATGVQGERGPPGLV 1792



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/138 (43%), Positives = 75/138 (54%), Gaps = 12/138 (8%)

Query: 113  GLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPK 163
            GL GP GQ G  G      + G+ GV G RGEKG  G +GP    G +G+ G  G  G K
Sbjct: 2793 GLPGPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEK 2852

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIP 220
            GD G  GP G PG  G++G  G+ G PG+ G  G++GL    G+ G DG PG  G  G  
Sbjct: 2853 GDKGEAGPPGRPGLAGQKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDRGEK 2912

Query: 221  GKDGLPGKDGIPGTNGTN 238
            G+ G PG  G PG +G +
Sbjct: 2913 GERGTPGIGGFPGPSGND 2930



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 94/255 (36%), Gaps = 106/255 (41%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G+ G  G +GE G KGERGE+G                           PG+ 
Sbjct: 2257 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2316

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG +G +GPKGD G PG +G  G+ G RG  G+ G PG  G+ G +
Sbjct: 2317 GEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGVAGPE 2376

Query: 200  ---------------------------------------GLPGEPGLDGIPGRN------ 214
                                                   GL GEPG  G PGR       
Sbjct: 2377 GKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTG 2436

Query: 215  -----------------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                                         G  G PG+DG  GKDG  G+ G  G  G+ G
Sbjct: 2437 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPG 2496

Query: 246  PRGNRGKSGINGVPG 260
            P G +G+ G  G PG
Sbjct: 2497 PVGPKGEPGPTGAPG 2511



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 85/164 (51%), Gaps = 16/164 (9%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
               K  C  GL G  G KGE G  G  G+ G++GE G PGV   PG  G PG EG  GPK
Sbjct: 2840 RGVKGAC--GLDGEKGDKGEAGPPGRPGLAGQKGEMGEPGV---PGQSGAPGKEGLIGPK 2894

Query: 164  GDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GD G+   PGP+G  G++G+RG  G  G+PG  G DG  G PG PG  G  G  G+ G  
Sbjct: 2895 GDRGFDGQPGPKGDRGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQK 2954

Query: 221  GKDGLPGKDGIPGT--------NGTNGEKGMTGPRGNRGKSGIN 256
            G+ G PG+  +            G  G  G  GPRG +G++ + 
Sbjct: 2955 GERGPPGERVVGAPGAPGAPGERGEQGRPGPAGPRGEKGEAALT 2998



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 85/205 (41%), Gaps = 72/205 (35%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--------------- 157
            GL GP G+KGE G  GE G  GE G+KGA      PGP+G  GD                
Sbjct: 2545 GLPGPRGEKGEAGRAGEPGDPGEDGQKGA------PGPKGFKGDPGVGVPGSPGPPGPPG 2598

Query: 158  --------------------GKRGPKGDMGYPGP---QGIPGDEGKR------------- 181
                                G+ GP+G+MG PGP   +G+ G  G+              
Sbjct: 2599 VKGDLGLPGPPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPG 2658

Query: 182  --------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                    G KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG
Sbjct: 2659 SVGPPGASGLKGDKGDPG-------AGLPGPRGERGEPGIRGEDGHPGQEGPRGLTGPPG 2711

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGV 258
            + G  GEKG  G  G +G  G + V
Sbjct: 2712 SRGERGEKGDVGSAGLKGDKGDSAV 2736



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 82/175 (46%), Gaps = 33/175 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRGPKGD 165
            G +GP G++G IG  GE G+KG+RG+ G       A G  GPPGP G+ G+ GK    G 
Sbjct: 2197 GERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGK---PGI 2253

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL-----------------------P 202
             G PG  G  G+ G+ G +G+ G  G  G  GRDG                        P
Sbjct: 2254 PGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGP 2313

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G PG  G  G PG DG  G  G  G  G  G++G  GPRG  G  G+ G
Sbjct: 2314 GLSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPG 2368



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 83/193 (43%), Gaps = 52/193 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++G+P         G VGP   PGP G PG    
Sbjct: 2456 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2515

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG  G+ GD  G+ G KGD G PG  G  G  G  GEP   G PG +G 
Sbjct: 2516 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP---GDPGEDGQ 2570

Query: 217  DGIPGKDGLPG--------------------------------KDGIPGTNGTNGEKGMT 244
             G PG  G  G                                  G PG  G  GE G  
Sbjct: 2571 KGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGPPGAPGVVGFPGQTGPRGEMGQP 2630

Query: 245  GPRGNRGKSGING 257
            GP G RG +G  G
Sbjct: 2631 GPSGERGLAGPPG 2643



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 94/248 (37%), Gaps = 99/248 (39%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
            P + GP G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD             
Sbjct: 1759 PAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1818

Query: 157  --------------------------EGKRGPKGD------------MGYPGPQGIPGDE 178
                                      +G+ G KGD             G  G +G PG  
Sbjct: 1819 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1878

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGL 207
            G  G KGD G PG    DGR+G P                               GEPG 
Sbjct: 1879 GPVGEKGDQGDPGE---DGRNGSPGPSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGD 1935

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGI 255
             G  G  G  G PG  G PG+ GI G              G  GEKG  GP G  G+SG+
Sbjct: 1936 RGQEGPRGPKGDPGLPGAPGERGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGL 1995

Query: 256  NGVPGTPA 263
            +G PG P 
Sbjct: 1996 DGKPGAPG 2003



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 75/162 (46%), Gaps = 38/162 (23%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGP 183
            +G  G KG PG  GPPG        G  GP G +         G  GPQG PG  G+ G 
Sbjct: 2412 QGPSGLKGEPGETGPPG-------RGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGE 2464

Query: 184  KGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTN--- 235
             G  G PGR G  G+D   G PG PG  G+PG  G  G PG  G PG+   G+PG     
Sbjct: 2465 TGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEK 2524

Query: 236  --------------GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                          G  G++G+ GPRG +G++G  G PG P 
Sbjct: 2525 GAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2566



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 62/120 (51%), Gaps = 29/120 (24%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1462 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSAIAKGERGFPGADGR 1518

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-IGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP G PG++G RGPKG+ G PG+ IG +G  GLPG
Sbjct: 1519 PGSPGRPGNPGTPGAPGLKGSPGLPGPHGDPGEQGTRGPKGEPGAPGQVIGGEG-PGLPG 1577



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 84/247 (34%), Gaps = 99/247 (40%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------------------- 144
            GP G +GE G+KGE G+ GERG +G PG                                
Sbjct: 2122 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 2181

Query: 145  -----------------VGPP---GPQGIPGDEGKR----------------------GP 162
                              GPP   GP G PG+ G +                      GP
Sbjct: 2182 FLPVPERRRGPKGDSGERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2241

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------- 208
             G  G PG  GIPG  G+ G  G+ G PG  G  G  G  GE G D              
Sbjct: 2242 SGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGP 2301

Query: 209  ------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                        G+ G  G  G+ G  G PG DG  G  G  G  G+ G RG  G  G +
Sbjct: 2302 PGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVPGIKGDRGEPGPRGQD 2361

Query: 257  GVPGTPA 263
            G PG P 
Sbjct: 2362 GNPGLPG 2368



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 49/89 (55%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG  G  GP+G  G +
Sbjct: 2841 GVKGACGLDGEKGDKGEAGPPGRPGLAGQKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2900

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            G+ GPKGD G  G +G PG  G  GP G+
Sbjct: 2901 GQPGPKGDRGEKGERGTPGIGGFPGPSGN 2929



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 86/193 (44%), Gaps = 47/193 (24%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            ++GP G+KG+   +G  G+ G  G  G PG  GP GP G           G  G PG  G
Sbjct: 1974 VRGPAGEKGD---RGPPGLDGRSGLDGKPGAPGPSGPNGA---------AGKAGDPGRDG 2021

Query: 174  IPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            +PG  G++G  G  G P         G+ GL+G++G PG+PG DG  G  G  G PG++ 
Sbjct: 2022 LPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGRE- 2080

Query: 225  LPGKDGIPGTNGTNG-----------------------EKGMTGPRGNRGKSGINGVPGT 261
              G+DG  G  G  G                         G  GP+G+RG++G  G  G 
Sbjct: 2081 --GRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGAGPKGDRGETGSKGEQGL 2138

Query: 262  PAICAYKRESCSL 274
            P     + E  S+
Sbjct: 2139 PGERGLRGEPGSV 2151



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 75/175 (42%), Gaps = 47/175 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI----------------- 153
            P G +G  G KGE G  GE G++GE G    P V       GI                 
Sbjct: 2123 PKGDRGETGSKGEQGLPGERGLRGEPGS--VPNVDRLLETAGIKASALREIVETWDESSG 2180

Query: 154  ---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD-------------- 196
               P  E +RGPKGD G  GP   PG EG       +G+PG  GL               
Sbjct: 2181 SFLPVPERRRGPKGDSGERGP---PGKEGP------IGFPGERGLKGDRGDPGPQGPPGL 2231

Query: 197  --GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
              G  G PG  GL G PG+ G+ G+PG+ G  G+ G PG  G  GEKG  G +G 
Sbjct: 2232 ALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGR 2286



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------ 158
            PPG  GP G +G  G  GE G KGERG        GP G +G+PG  G            
Sbjct: 1684 PPGAIGPKGDRGFPGPLGEAGEKGERGPP------GPAGSRGLPGVAGRPGAEGPEGPPG 1737

Query: 159  ---KRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
               ++G KG+ G P           GP+G  GD G  GP+G  G  G  G  G   LPG+
Sbjct: 1738 PTGRQGEKGEPGRPGDTAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLV-LPGD 1796

Query: 205  PGLDGIPGRNGMDGIPGK 222
            PG  G PG  G  G+ G+
Sbjct: 1797 PGPKGDPGDRGPIGLTGR 1814



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 42/102 (41%), Gaps = 30/102 (29%)

Query: 183  PKGDMGYPGRIGLDGR------------------------------DGLPGEPGLDGIPG 212
            PKG  G PG +GL G+                               G PG  G  G PG
Sbjct: 1464 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSAIAKGERGFPGADGRPGSPG 1523

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            R G  G PG  GL G  G+PG +G  GE+G  GP+G  G  G
Sbjct: 1524 RPGNPGTPGAPGLKGSPGLPGPHGDPGEQGTRGPKGEPGAPG 1565



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 73/191 (38%), Gaps = 69/191 (36%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPG 149
            +G    + E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG
Sbjct: 2190 RGPKGDSGERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPG 2249

Query: 150  PQGIPGDEGKRGPKGDMGYPG--------------------------------------- 170
              GIPG  G+ G  G+ G PG                                       
Sbjct: 2250 KPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVD 2309

Query: 171  -----------PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                       P G+ G +G+      +GPKGD G P   G+ G  G PG  G DG PG 
Sbjct: 2310 EPGPGLSGEQGPPGLKGAKGEPGSDGDQGPKGDRGVP---GIKGDRGEPGPRGQDGNPGL 2366

Query: 214  NGMDGIPGKDG 224
             G  G+ G +G
Sbjct: 2367 PGERGVAGPEG 2377



 Score = 39.7 bits (91), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 35/83 (42%), Gaps = 27/83 (32%)

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            KG+ G+PG                         DGR G PG PG  G PG  G+ G P  
Sbjct: 1507 KGERGFPG------------------------ADGRPGSPGRPGNPGTPGAPGLKGSP-- 1540

Query: 223  DGLPGKDGIPGTNGTNGEKGMTG 245
             GLPG  G PG  GT G KG  G
Sbjct: 1541 -GLPGPHGDPGEQGTRGPKGEPG 1562


>gi|147898761|ref|NP_001080437.1| collagen alpha-1(VI) chain precursor [Xenopus laevis]
 gi|82210072|sp|Q801S8.1|CO6A1_XENLA RecName: Full=Collagen alpha-1(VI) chain; Flags: Precursor
 gi|28703819|gb|AAH47255.1| Col6a1 protein [Xenopus laevis]
          Length = 1045

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/171 (45%), Positives = 92/171 (53%), Gaps = 20/171 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------GIPGDEGK 159
           PG  G  G+KGE G +G+ G  G  G++G  G +GPPG              G PGD+G+
Sbjct: 420 PGSNGLAGEKGESGDEGDAGADGSPGKRGEAGELGPPGVSGGRGARGEKGEPGPPGDQGR 479

Query: 160 RGPKGDMGYP------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            GP G  G P      GP+G  GDEG RGP+G  G  G  GL G  G+ GE G DG PG 
Sbjct: 480 DGPAGPFGDPGEAGPQGPKGYRGDEGPRGPEGPKGPRGAKGLPGEQGIAGERGDDGRPG- 538

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV-PGTPA 263
           NG DG PG  G PG  G PG+NGT G  G  G  G +G+ G + V PG P 
Sbjct: 539 NGTDGFPGFQGYPGSRGDPGSNGTKGYPGPKGDEGEQGEPGDDNVSPGPPG 589



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/146 (45%), Positives = 80/146 (54%), Gaps = 11/146 (7%)

Query: 108 EYCPPGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           E  PPG+   +G  G+KGE G  G+ G  G  G  G PG  GP GP+G  GDEG RGP+G
Sbjct: 452 ELGPPGVSGGRGARGEKGEPGPPGDQGRDGPAGPFGDPGEAGPQGPKGYRGDEGPRGPEG 511

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG--- 221
             G  G +G+PG++G  G +GD G PG  G DG  G  G PG  G PG NG  G PG   
Sbjct: 512 PKGPRGAKGLPGEQGIAGERGDDGRPGN-GTDGFPGFQGYPGSRGDPGSNGTKGYPGPKG 570

Query: 222 ---KDGLPGKDGI-PGTNGTNGEKGM 243
              + G PG D + PG  G  G KG 
Sbjct: 571 DEGEQGEPGDDNVSPGPPGPKGAKGY 596



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 89/182 (48%), Gaps = 30/182 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  G  G KG+ G++GE+G +GA G  G  G +GI G +G++G  G  G PG 
Sbjct: 309 PGRQGDIGPVGYQGMKGDQGIRGEKGGRGAKGSKGDKGKRGIDGVDGQKGEDGYNGLPGC 368

Query: 172 QGIPGDE---GKRGPKGD------------------------MGYPGRIGLDGRDGLPGE 204
           +G PG +   G  GPKGD                         G  G  G  G +GL GE
Sbjct: 369 KGSPGFDGAPGSSGPKGDPGPYGTKGEKGVPGTPGTGGRPGNTGNTGDKGDPGSNGLAGE 428

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G  G DG PGK G  G+ G PG +   G  GEKG  GP G++G+ G  G  G 
Sbjct: 429 KGESGDEGDAGADGSPGKRGEAGELGPPGVSGGRGARGEKGEPGPPGDQGRDGPAGPFGD 488

Query: 262 PA 263
           P 
Sbjct: 489 PG 490



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 91/189 (48%), Gaps = 35/189 (18%)

Query: 98  AMQGFCNSTKEYCPP--GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQG 152
           A QG C      C P  GL GP G  G  G  G+ G+ G+RG  G PG    +GP G QG
Sbjct: 266 AEQGCCTYE---CKPSRGLSGPSGPPGYEGEIGKPGLPGDRGLPGDPGRQGDIGPVGYQG 322

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           + GD+G RG KG  G  G +G   D+GKRG  G  G  G  G +G  G  G PG DG PG
Sbjct: 323 MKGDQGIRGEKGGRGAKGSKG---DKGKRGIDGVDGQKGEDGYNGLPGCKGSPGFDGAPG 379

Query: 213 RNGMDGIPGKDGLPGK---------------------DGIPGTNGTNGEKGMTGPRGNRG 251
            +G  G PG  G  G+                      G PG+NG  GEKG +   G+ G
Sbjct: 380 SSGPKGDPGPYGTKGEKGVPGTPGTGGRPGNTGNTGDKGDPGSNGLAGEKGES---GDEG 436

Query: 252 KSGINGVPG 260
            +G +G PG
Sbjct: 437 DAGADGSPG 445



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 79/163 (48%), Gaps = 15/163 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKR--------- 160
           G+ G  GQKGE G  G  G KG  G  GAPG  GP   PGP G  G++G           
Sbjct: 349 GIDGVDGQKGEDGYNGLPGCKGSPGFDGAPGSSGPKGDPGPYGTKGEKGVPGTPGTGGRP 408

Query: 161 ---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
              G  GD G PG  G+ G++G+ G +GD G  G  G  G  G  G PG+ G  G  G  
Sbjct: 409 GNTGNTGDKGDPGSNGLAGEKGESGDEGDAGADGSPGKRGEAGELGPPGVSGGRGARGEK 468

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G  G+DG  G  G  GE G  GP+G RG  G  G  G
Sbjct: 469 GEPGPPGDQGRDGPAGPFGDPGEAGPQGPKGYRGDEGPRGPEG 511



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 57/119 (47%), Gaps = 18/119 (15%)

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G+ GP GP G  G+ GK       G PG +G+PGD G++G  G +GY G           
Sbjct: 280 GLSGPSGPPGYEGEIGK------PGLPGDRGLPGDPGRQGDIGPVGYQGM---------- 323

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  GI G  G  G  G  G  GK GI G +G  GE G  G  G +G  G +G PG+
Sbjct: 324 --KGDQGIRGEKGGRGAKGSKGDKGKRGIDGVDGQKGEDGYNGLPGCKGSPGFDGAPGS 380



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 34/71 (47%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           GL G  G PG  G  G PG  G  G+PG  G  G  G  G  G  G++G+ G +G RG  
Sbjct: 280 GLSGPSGPPGYEGEIGKPGLPGDRGLPGDPGRQGDIGPVGYQGMKGDQGIRGEKGGRGAK 339

Query: 254 GINGVPGTPAI 264
           G  G  G   I
Sbjct: 340 GSKGDKGKRGI 350


>gi|50914143|ref|YP_060115.1| collagen-like surface protein [Streptococcus pyogenes MGAS10394]
 gi|50903217|gb|AAT86932.1| Collagen-like surface protein [Streptococcus pyogenes MGAS10394]
          Length = 362

 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/155 (47%), Positives = 93/155 (60%), Gaps = 9/155 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G  G  G +G  G KGE G+KG  G VGP GPQG+PG +G R   G  G  G 
Sbjct: 115 PGPRGATGPAGPAGPQGPRGDKGETGDKGDQGPVGPVGPQGMPGAKGDRCETGPAGQNGK 174

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG---LPGK 228
            G+PG +GK G  G  G PG+ G DG++G  G PG DG  G++G DG+PGKDG     GK
Sbjct: 175 DGLPGKDGKDGQDGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGQDGK 234

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           DG+PG +G +G+ G+       GK G +G PG PA
Sbjct: 235 DGLPGKDGQDGKDGLP------GKDGKDGQPGKPA 263



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 103/194 (53%), Gaps = 19/194 (9%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG--YP-GPQGIPGDEGKR 181
           G  G  G KG+ G +GA G  GP GPQG  GD+G+ G KGD G   P GPQG+PG +G R
Sbjct: 104 GKDGRDGDKGDPGPRGATGPAGPAGPQGPRGDKGETGDKGDQGPVGPVGPQGMPGAKGDR 163

Query: 182 ------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDGIP 232
                 G  G  G PG+ G DG+DG  G PG DG  G+NG DG+P   GKDG  GKDG+P
Sbjct: 164 CETGPAGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGKDGLP 223

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVP------GTPAICAYKRESCSLLPNSETSQLLIP 286
           G +G +G+ G  G  G  G+ G +G+P      G P   A K       P++       P
Sbjct: 224 GKDGKDGQDGKDGLPGKDGQDGKDGLPGKDGKDGQPGKPAPKTPEVPQKPDT-APDTPKP 282

Query: 287 PTIVGSEHIFSSSP 300
           P I G     + +P
Sbjct: 283 PQIPGQSKDVTPAP 296



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 63/120 (52%), Gaps = 12/120 (10%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           V  QG   +  + C     GP GQ G+ G  G+ G  G+ G+ G PG  G  G     G+
Sbjct: 151 VGPQGMPGAKGDRC---ETGPAGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGQNGKDGL 207

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG +GK       G  G  G+PG +GK G  G  G PG+ G DG+DGLPG+ G DG PG+
Sbjct: 208 PGKDGKD------GQDGKDGLPGKDGKDGQDGKDGLPGKDGQDGKDGLPGKDGKDGQPGK 261



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 54/107 (50%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +GK G  GD G PGP+G  G  G  GP+G  G  G  G  G  G  G  G  G+PG  G 
Sbjct: 103 DGKDGRDGDKGDPGPRGATGPAGPAGPQGPRGDKGETGDKGDQGPVGPVGPQGMPGAKGD 162

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
               G  G  GKDG+PG +G +G+ G  G  G  GK G NG  G P 
Sbjct: 163 RCETGPAGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGQNGKDGLPG 209


>gi|326922309|ref|XP_003207392.1| PREDICTED: collagen alpha-1(VI) chain-like [Meleagris gallopavo]
          Length = 998

 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/150 (46%), Positives = 85/150 (56%), Gaps = 6/150 (4%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD-- 177
            +GE G  G  G KG+ G+ G PG +GP G QG+ GD+G RG KG  G  G +G  G   
Sbjct: 265 HEGERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKGDKGSRGEKGSRGAKGAKGEKGKRG 324

Query: 178 -EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
            +G  G KG+ GYPG  G  G  G  GEPG DG PGR G+ G PG+ G PG  G PG  G
Sbjct: 325 IDGIDGMKGEAGYPGLPGCKGSPGFDGEPGEDGKPGRQGIPGSPGEKGAPGNRGEPGPLG 384

Query: 237 TNGEK---GMTGPRGNRGKSGINGVPGTPA 263
             G++   G  GP G RG +G  G PG+P 
Sbjct: 385 EIGDEGSPGADGPPGERGSNGERGPPGSPG 414



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/187 (42%), Positives = 93/187 (49%), Gaps = 37/187 (19%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGI---- 153
           GF     E   PG QG  G  GE GA   +GE G  GE G++G+PG  GPPG +G     
Sbjct: 348 GFDGEPGEDGKPGRQGIPGSPGEKGAPGNRGEPGPLGEIGDEGSPGADGPPGERGSNGER 407

Query: 154 --PGDEGKRGPKGDMGYPGPQG------------------------IPGDEGKRGPKGDM 187
             PG  G RGP+GD+G PGP G                          GD+G RG +G  
Sbjct: 408 GPPGSPGDRGPRGDLGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPK 467

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G PG  GL G  GL GE G DG PG NG  G PG  G  G  G PG NGT   KG  GP+
Sbjct: 468 GSPGAPGLPGDPGLMGERGEDGPPG-NGTIGFPGAPGQQGDRGDPGINGT---KGYVGPK 523

Query: 248 GNRGKSG 254
           G+ G++G
Sbjct: 524 GDEGEAG 530



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 88/168 (52%), Gaps = 18/168 (10%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDEG 158
           E   PGL G  G  G+ G  G+MG          KG RGEKG+ G  G  G +G  G +G
Sbjct: 268 ERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKGDKGSRGEKGSRGAKGAKGEKGKRGIDG 327

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             G KG+ GYP   G+PG +G  G  G+   PG  G  GR G+PG PG  G PG  G  G
Sbjct: 328 IDGMKGEAGYP---GLPGCKGSPGFDGE---PGEDGKPGRQGIPGSPGEKGAPGNRGEPG 381

Query: 219 IPGK---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+   +G PG DG PG  G+NGE+G  G  G+RG  G  G PG P 
Sbjct: 382 PLGEIGDEGSPGADGPPGERGSNGERGPPGSPGDRGPRGDLGEPGPPG 429



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 84/169 (49%), Gaps = 28/169 (16%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGYPGPQGIP 175
           G+ GE G  G  G+ G  GEKGAPG  G PGP G  GDEG     GP G+ G  G +G P
Sbjct: 351 GEPGEDGKPGRQGIPGSPGEKGAPGNRGEPGPLGEIGDEGSPGADGPPGERGSNGERGPP 410

Query: 176 GDEGKRGPKGDMGYPGRIGLDGR------------------------DGLPGEPGLDGIP 211
           G  G RGP+GD+G PG  G  GR                        DG  G  G  G P
Sbjct: 411 GSPGDRGPRGDLGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSP 470

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G+ G PG  G  G+DG PG NGT G  G  G +G+RG  GING  G
Sbjct: 471 GAPGLPGDPGLMGERGEDGPPG-NGTIGFPGAPGQQGDRGDPGINGTKG 518



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 86/181 (47%), Gaps = 15/181 (8%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            M+G   S  E    G +G  G+KG+ G  G  G+KGE G  G PG  G PG  G PG++
Sbjct: 297 GMKGDKGSRGEKGSRGAKGAKGEKGKRGIDGIDGMKGEAGYPGLPGCKGSPGFDGEPGED 356

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK G +G  G PG +G PG+ G+ GP G++G  G  G DG  G  G  G  G PG  G  
Sbjct: 357 GKPGRQGIPGSPGEKGAPGNRGEPGPLGEIGDEGSPGADGPPGERGSNGERGPPGSPGDR 416

Query: 218 GIPGKDGLPGKDGIPGTNG---------------TNGEKGMTGPRGNRGKSGINGVPGTP 262
           G  G  G PG  G  G  G                 G +G  GPRGN G  G  G PG P
Sbjct: 417 GPRGDLGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPGAPGLP 476

Query: 263 A 263
            
Sbjct: 477 G 477



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--MGYPGPQGIPGDEGKRGPK 184
           +G+ G +G  G KG+PG  G PG  G+ G+ G+ GP G+  +G+P   G PG +G RG  
Sbjct: 455 RGDDGPRGNEGPKGSPGAPGLPGDPGLMGERGEDGPPGNGTIGFP---GAPGQQGDRGDP 511

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDG-IPGRNGMDGIPG 221
           G  G  G +G  G +G  G+PG D    G +G+ G  G
Sbjct: 512 GINGTKGYVGPKGDEGEAGDPGNDNPTAGPSGIKGAKG 549



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 48/93 (51%), Gaps = 6/93 (6%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--VVGPPGPQGIPGDEGKRGPKGDMGY 168
           P G +GP G  G  G  G+ G+ GERGE G PG   +G PG  G  GD G  G  G  GY
Sbjct: 460 PRGNEGPKGSPGAPGLPGDPGLMGERGEDGPPGNGTIGFPGAPGQQGDRGDPGINGTKGY 519

Query: 169 PGPQGIPGDEGKRG-PKGDMGYPGRIGLDGRDG 200
            GP+   GDEG+ G P  D    G  G+ G  G
Sbjct: 520 VGPK---GDEGEAGDPGNDNPTAGPSGIKGAKG 549



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G+ GLPG+ G  G PGR G  G  G  G+ G  G   + G  G +G  G +G +GK 
Sbjct: 267 GERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKGDKG---SRGEKGSRGAKGAKGEKGKR 323

Query: 254 GINGVPGTPAICAY 267
           GI+G+ G      Y
Sbjct: 324 GIDGIDGMKGEAGY 337


>gi|55608762|ref|XP_515756.1| PREDICTED: macrophage receptor MARCO isoform 4 [Pan troglodytes]
          Length = 520

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/170 (46%), Positives = 95/170 (55%), Gaps = 18/170 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +GE+G KG  G++GP G  G         +PG +G RG K
Sbjct: 205 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMK 264

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRN--- 214
           GD   MG PG QG  GD G+ GP G  G+PG  G  G+ GL   PG PG  G PG     
Sbjct: 265 GDSGVMGPPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 324

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G PG+ GLPG  G PG  G  G KG TG +G +G+ G +GVPG   +
Sbjct: 325 GSAGSPGQAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGV 374



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 102/193 (52%), Gaps = 21/193 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD G+ GP       
Sbjct: 235 GLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDSGVMGPPGAQGSKGDSGRPGPPGLAGFP 294

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD 217
             KGD G PG QG+PG  G  G  G  G PG  G  G+ GL   PG PG  G+ G  G  
Sbjct: 295 GAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGQAGLPGSPGSPGATGLKGSKGDT 354

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPR---GNRGKSGINGVPGTPAICAYKRES 271
           G+ G+ G  G+ G+PG  G  GE+   G+ GP+   G  G+ G  GV G+      K E 
Sbjct: 355 GLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPGQAGQKGDQGVKGSSGEQGVKGEK 414

Query: 272 CSLLPNSETSQLL 284
                NS + +++
Sbjct: 415 GERGENSVSVRIV 427



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G  G  G  G +G++G PG+ G PGP G  G  G +G  G  G PG
Sbjct: 272 PPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPG 331

Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G+PG  G       +G KGD G  G+ G  G  G+PG  G+ G  G  G+ G  G  G
Sbjct: 332 QAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPG 391

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G+ G  G  G++GE+G+ G +G RG++ ++
Sbjct: 392 QAGQKGDQGVKGSSGEQGVKGEKGERGENSVS 423



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 74/150 (49%), Gaps = 27/150 (18%)

Query: 143 GVVGPPGPQGIPGD---------EGKRGPKGDMGYPGPQ------------GIPGDEGKR 181
           G  G  GPQG PG          +G++G KGD G  GP+            G+PG +G R
Sbjct: 202 GEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDR 261

Query: 182 GPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G KGD   MG PG  G  G  G PG PGL G PG  G  G PG  G+PG    PG  G  
Sbjct: 262 GMKGDSGVMGPPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGP---PGAVGHP 318

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G KG  G  G+ G++G+ G PG+P     K
Sbjct: 319 GAKGEPGSAGSPGQAGLPGSPGSPGATGLK 348



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 15/124 (12%)

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           + G+ G +GP+G  G  G  G PG +G++G KGD G    IG  G  G  GE G  G+PG
Sbjct: 200 VKGEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGL---IGPKGETGTKGEKGDLGLPG 256

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPGTPA 263
             G  G+ G  G+ G    PG  G+ G+ G  GP         +G++G+ G+ GVPG P 
Sbjct: 257 SKGDRGMKGDSGVMGP---PGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPG 313

Query: 264 ICAY 267
              +
Sbjct: 314 AVGH 317



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 56/141 (39%), Gaps = 33/141 (23%)

Query: 164 GDMGYPGPQGIPGDEG------------------KRGPKGDMG---------------YP 190
           G  G  G QG PG +G                  ++G KG  G                 
Sbjct: 142 GMFGIKGEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAAGRDGATGPPGPQGPPGVK 201

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  GL G  G PG+ G  G PG  G  G  G  GL G  G  GT G  G+ G+ G +G+R
Sbjct: 202 GEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDR 261

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  G +GV G P     K +S
Sbjct: 262 GMKGDSGVMGPPGAQGSKGDS 282


>gi|195978560|ref|YP_002123804.1| hypothetical protein Sez_1457 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195975265|gb|ACG62791.1| collagen-like protein with amino-end fibronectin-binding domain
           SclZ.10 [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 666

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 101/180 (56%), Gaps = 9/180 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGY 168
           PG+ GP G KGE G  G+ G  G++GE+G  G+ GP G  GIPG   ++GK G  G  G 
Sbjct: 314 PGIPGPRGDKGETGPAGKDGKPGDKGERGPQGLPGPKGEPGIPGPKGEDGKDGAPGHDGQ 373

Query: 169 PGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGK 222
           PGP+G  GD GK   RGPKG+ G PG  G +G+DG P   G+ G DG PG  G  G PG+
Sbjct: 374 PGPKGEKGDPGKPGERGPKGEPGIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGQ 433

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
            G+PG  G PG +G +GEKG  G +G +G+ G  G  G       + E     P  E  +
Sbjct: 434 QGIPGPKGDPGHDGKDGEKGERGEKGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGE 493



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 90/161 (55%), Gaps = 18/161 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G+ G+ G +G  G +GE G+ G PG+ GP G +G  G  GK G  GD G  GP
Sbjct: 284 PGERGPAGKDGKNGERGPQGPRGENGKDGKPGIPGPRGDKGETGPAGKDGKPGDKGERGP 343

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------------GEPGLDGIPGRNGMDGI 219
           QG+P      GPKG+ G PG  G DG+DG P            G+PG  G  G  G  GI
Sbjct: 344 QGLP------GPKGEPGIPGPKGEDGKDGAPGHDGQPGPKGEKGDPGKPGERGPKGEPGI 397

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G  GKDG PG +G NG+ G  GP+G +G  G  G+PG
Sbjct: 398 PGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGQQGIPG 438



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/146 (45%), Positives = 81/146 (55%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G+ G+ GA G  G  G +GEKG PG  G  GP+G PG  G RG  G  G PG 
Sbjct: 353 PGIPGPKGEDGKDGAPGHDGQPGPKGEKGDPGKPGERGPKGEPGIPGPRGENGKDGAPGR 412

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G  G +G+ GPKG+ G PG+ G+ G  G PG  G DG  G  G  G  G+ G  G  G 
Sbjct: 413 DGQNGKDGQPGPKGEKGDPGQQGIPGPKGDPGHDGKDGEKGERGEKGPQGERGEQGPQGE 472

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  GE+G  GP+G RG+ G  G
Sbjct: 473 RGEQGPQGERGEQGPQGERGEQGPQG 498



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 80/150 (53%), Gaps = 3/150 (2%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMG 167
           P G +G  G+ GE G KGE G+ G RGE G   APG  G  G  G PG +G++G  G  G
Sbjct: 376 PKGEKGDPGKPGERGPKGEPGIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGQQG 435

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            PGP+G PG +GK G KG+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G
Sbjct: 436 IPGPKGDPGHDGKDGEKGERGEKGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQG 495

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G  GE+G  GP+G RG+ G  G
Sbjct: 496 PQGERGEQGPQGERGEKGPQGERGEQGPQG 525



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 79/154 (51%), Gaps = 21/154 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDEGKRGPK 163
           G  G  GQ G  G KG+ G  GERG KG PG+ GP         PG  G  G +G+ GPK
Sbjct: 366 GAPGHDGQPGPKGEKGDPGKPGERGPKGEPGIPGPRGENGKDGAPGRDGQNGKDGQPGPK 425

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G PG QGIP      GPKGD G+      DG+DG  GE G  G  G  G  G  G+ 
Sbjct: 426 GEKGDPGQQGIP------GPKGDPGH------DGKDGEKGERGEKGPQGERGEQGPQGER 473

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G  G  GE+G  GP+G RG+ G  G
Sbjct: 474 GEQGPQGERGEQGPQGERGEQGPQGERGEQGPQG 507



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 82/152 (53%), Gaps = 9/152 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE------RGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG+ GP G+ G+ GA G  G  G+      +GEKG PG  G PGP+G PG +GK G KG+
Sbjct: 395 PGIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGQQGIPGPKGDPGHDGKDGEKGE 454

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  GPQ   G+ G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G+ G 
Sbjct: 455 RGEKGPQ---GERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGE 511

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G  G  GE+   GP+G RG+ G  G
Sbjct: 512 KGPQGERGEQGPQGEREEQGPQGERGEQGPQG 543



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/136 (44%), Positives = 72/136 (52%), Gaps = 12/136 (8%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G +G +GE G PG  GP G  G  G+ G +GP+G+ G  G  GIPG      P+GD G  
Sbjct: 273 GRRGPQGEPGKPGERGPAGKDGKNGERGPQGPRGENGKDGKPGIPG------PRGDKG-- 324

Query: 191 GRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
              G  G+DG P   GE G  G+PG  G  GIPG  G  GKDG PG +G  G KG  G  
Sbjct: 325 -ETGPAGKDGKPGDKGERGPQGLPGPKGEPGIPGPKGEDGKDGAPGHDGQPGPKGEKGDP 383

Query: 248 GNRGKSGINGVPGTPA 263
           G  G+ G  G PG P 
Sbjct: 384 GKPGERGPKGEPGIPG 399



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 75/137 (54%), Gaps = 6/137 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G KG+ G  G+ G KGERGEKG  G  G  GPQG   + G++GP+G+ G  GP
Sbjct: 431 PGQQGIPGPKGDPGHDGKDGEKGERGEKGPQGERGEQGPQG---ERGEQGPQGERGEQGP 487

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QG   + G++GP+G+ G  G  G  G  G  GE G  G  G     G  G+ G  G  G 
Sbjct: 488 QG---ERGEQGPQGERGEQGPQGERGEKGPQGERGEQGPQGEREEQGPQGERGEQGPQGE 544

Query: 232 PGTNGTNGEKGMTGPRG 248
            G  G  GE+G  GPRG
Sbjct: 545 RGEQGPQGERGEQGPRG 561



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 6/98 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G++GE G +GE G +G +GE+G  G  G  G QG  G+ G++GP+G+ G  GPQ
Sbjct: 465 GEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEKGPQGERGEQGPQ 524

Query: 173 G------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           G        G+ G++GP+G+ G  G  G  G  G  GE
Sbjct: 525 GEREEQGPQGERGEQGPQGERGEQGPQGERGEQGPRGE 562



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
           +G+RGP+G+ G PG  G  G+DG  GE G  G  G NG DG   K G+PG  G  G  G 
Sbjct: 272 DGRRGPQGEPGKPGERGPAGKDGKNGERGPQGPRGENGKDG---KPGIPGPRGDKGETGP 328

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+ G  G +G RG  G+ G  G P I   K E
Sbjct: 329 AGKDGKPGDKGERGPQGLPGPKGEPGIPGPKGE 361



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             QG      E  P G +G  G +GE G KG  G +GE+G +G     GP       G+ 
Sbjct: 483 GEQGPQGERGEQGPQGERGEQGPQGERGEKGPQGERGEQGPQGEREEQGP------QGER 536

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRG 182
           G++GP+G+ G  GPQG  G++G RG
Sbjct: 537 GEQGPQGERGEQGPQGERGEQGPRG 561


>gi|26326989|dbj|BAC27238.1| unnamed protein product [Mus musculus]
          Length = 921

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/186 (45%), Positives = 103/186 (55%), Gaps = 24/186 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VKGERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G               + G++GEKG
Sbjct: 425 LPGMKGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGDQGPPGPQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMGYPGRIG 194
           A G  G PGPQGIPG   D+G+RGP G+ G  G +GI G  G     GPKGD G PG   
Sbjct: 485 ARGFDGEPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSPGPKGDTGLPG--- 541

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           +DGRDG+PG PG  G  G+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G+ G
Sbjct: 542 VDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLG 601

Query: 255 INGVPG 260
            +G PG
Sbjct: 602 SSGKPG 607



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G+ G  G +G+ G  GE G +G+RG +G+ G+ G P            GPKGD G
Sbjct: 491 EPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG +GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG  G  G PG P 
Sbjct: 599 QLGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPG 640



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 87/186 (46%), Gaps = 30/186 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR--- 181
           G  G  G+ G +G KGA G +G PG QG  G+EG    +G++G  G QG PG +G R   
Sbjct: 418 GRSGYPGLPGMKGHKGAKGEIGEPGRQGHKGEEGD---QGELGEVGDQGPPGPQGLRGIT 474

Query: 182 ---------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---- 222
                          G  G  G PG  G  G+ G PGE G +G  G  G  GIPG     
Sbjct: 475 GIVGDKGEKGARGFDGEPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSPGPK 534

Query: 223 --DGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
              GLP   G+DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  +    
Sbjct: 535 GDTGLPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAP 594

Query: 278 SETSQL 283
            +  QL
Sbjct: 595 GKPGQL 600



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 84/175 (48%), Gaps = 21/175 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E   PG  G +G +G  G  G  G KG  GEKG  G  G PG  G  G  
Sbjct: 547 GIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKP 606

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG------------------LDGRD 199
           G++GP G++G  GP+G+PG  G  GP+G  G PG++G                  + G  
Sbjct: 607 GQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDR 666

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRG 251
           G+ GEPG  G  G +G +G  G  G  G  G PG  G+    GE G+ GP G RG
Sbjct: 667 GVFGEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGIRG 721



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 77/176 (43%), Gaps = 54/176 (30%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   ++G  G+ G++G PG VGP GP+G+PG  G  GP+G  G 
Sbjct: 579 PGAKGVAGEKGNTGAPGKPGQLGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGI 638

Query: 169 PGP------------------------------------QGIPGDEGKRGPKGDMGYPGR 192
           PG                                     QG  G+EG+ G +GD+G  G+
Sbjct: 639 PGKLGSVGSPGLPGLPGPPGLPGMKGDRGVFGEPGPKGEQGASGEEGEAGARGDLGDMGQ 698

Query: 193 IGLDGRDGLPGEPGLDGIPGRNG---------------MDGIPGKDGLPGKDGIPG 233
            G  G  G PGEPGL G  G  G               M G  G  GLPG  G PG
Sbjct: 699 PGPKGSVGNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGMQGDQGATGLPGIQGPPG 754



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 83/171 (48%), Gaps = 18/171 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  G+ G+ G  G++G++G  G  G PG  G  G +G  G  GK G  G  G PG 
Sbjct: 549 PGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKPGQ 608

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------LDGIPGR 213
           QG PG+ G RGP+G  G  G +G +G  G+PG+ G                  + G  G 
Sbjct: 609 QGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDRGV 668

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G+ G  G++G  G  G  G+ G  GP+G+ G  G  G+ G   I
Sbjct: 669 FGEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGI 719



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G++G+RGP  +G  G PG  G+PGD G       
Sbjct: 812 QMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAIGLPGDPG------- 864

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 865 ---PASYGKNGRDGEQGPPGV 882



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 42/85 (49%), Gaps = 17/85 (20%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG +G PG  G RGPKGD+               GE G  G PGR G  G+PG  
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDL---------------GEKGERGPPGR-GPKGLPGAI 857

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRG 248
           GLPG  G P + G NG  G  GP G
Sbjct: 858 GLPGDPG-PASYGKNGRDGEQGPPG 881


>gi|426235923|ref|XP_004011926.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(IX) chain [Ovis
           aries]
          Length = 937

 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/186 (47%), Positives = 107/186 (57%), Gaps = 24/186 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VKGERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G               V GE+GEKG
Sbjct: 440 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGGLGEVGAQGPPGAQGLRGITGVAGEKGEKG 499

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIG 194
           A G+ G PGPQG+PG   D+G+RGP G++G  G   PQG PG  G  GPKGD G PG   
Sbjct: 500 ARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGERGPQGSPGIPGLPGPKGDTGLPG--- 556

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           +DGRDG+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G+ G
Sbjct: 557 VDGRDGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGIPGAKGVAGEKGNTGAPGKPGQLG 616

Query: 255 INGVPG 260
            +G PG
Sbjct: 617 NSGKPG 622



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 85/162 (52%), Gaps = 45/162 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      + G++G++G 
Sbjct: 441 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGGLGEVGAQGPPGAQGLRGITGVAGEKGEKGA 500

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQG+PG   D+G+RGP      PG IG  G  G  G PG+ G+PG  G  G+
Sbjct: 501 RGLDGEPGPQGLPGAPGDQGQRGP------PGEIGPKGERGPQGSPGIPGLPGPKGDTGL 554

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG DG   +DGIP                        G+PGT
Sbjct: 555 PGVDG---RDGIP------------------------GMPGT 569



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/150 (46%), Positives = 79/150 (52%), Gaps = 18/150 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE+G KGERG +G+PG+ G P            GPKGD G
Sbjct: 506 EPGPQGLPGAPGDQGQRGPPGEIGPKGERGPQGSPGIPGLP------------GPKGDTG 553

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 554 LPGVDGRDGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGIPGAKGVAGEKGNTGAPGKPG 613

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG  G  GE    GPRG RG SG
Sbjct: 614 QLGNSGKPGRQGPPGE---VGPRGPRGLSG 640



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ G+ 
Sbjct: 439 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGGLGEVGAQGPPGAQGLRGITGVA 492

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G RG  G  G+PG P 
Sbjct: 493 GEKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGERGPQGSPGIPGLPG 547



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 75/149 (50%), Gaps = 24/149 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G    QG PG +G RG  
Sbjct: 433 GRSGHPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGGLGEVGA---QGPPGAQGLRG-- 487

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK--- 241
                    G+ G  G  G  GLDG PG  G+ G PG  G   + G PG  G  GE+   
Sbjct: 488 -------ITGVAGEKGEKGARGLDGEPGPQGLPGAPGDQG---QRGPPGEIGPKGERGPQ 537

Query: 242 ------GMTGPRGNRGKSGINGVPGTPAI 264
                 G+ GP+G+ G  G++G  G P +
Sbjct: 538 GSPGIPGLPGPKGDTGLPGVDGRDGIPGM 566



 Score = 46.6 bits (109), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 12/80 (15%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G+ G RGP  +G  G PG  G+PGD G       
Sbjct: 827 QMGLRGLPGMKGPPGALGVRGPKGDAGERGDRGPPGRGPKGLPGAPGLPGDPG------- 879

Query: 187 MGYPGRIGLDGRDGLPGEPG 206
              P   G +GRDG  G PG
Sbjct: 880 ---PASYGRNGRDGERGPPG 896



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 45/84 (53%), Gaps = 20/84 (23%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGD G  G +G PG    RGPKG         
Sbjct: 827 QMGLRGLPGMKGPPGALGV------RGPKGDAGERGDRGPPG----RGPKG--------- 867

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDG 218
           L G  GLPG+PG     GRNG DG
Sbjct: 868 LPGAPGLPGDPGPASY-GRNGRDG 890



 Score = 39.3 bits (90), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 39/84 (46%), Gaps = 18/84 (21%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIPGRNGMDGIPG 221
           G  G PG +G PG  G RGPKGD G  G  G  GR   GLPG PGL G PG         
Sbjct: 829 GLRGLPGMKGPPGALGVRGPKGDAGERGDRGPPGRGPKGLPGAPGLPGDPGPASY----- 883

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTG 245
                      G NG +GE+G  G
Sbjct: 884 -----------GRNGRDGERGPPG 896


>gi|226693380|ref|NP_031766.3| collagen alpha-1(IX) chain precursor [Mus musculus]
 gi|148682463|gb|EDL14410.1| procollagen, type IX, alpha 1 [Mus musculus]
          Length = 921

 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/186 (45%), Positives = 103/186 (55%), Gaps = 24/186 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VKGERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G               + G++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGDQGPPGPQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMGYPGRIG 194
           A G  G PGPQGIPG   D+G+RGP G+ G  G +GI G  G     GPKGD G PG   
Sbjct: 485 ARGFDGEPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSPGPKGDTGLPG--- 541

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           +DGRDG+PG PG  G  G+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G+ G
Sbjct: 542 VDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLG 601

Query: 255 INGVPG 260
            +G PG
Sbjct: 602 SSGKPG 607



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G+ G  G +G+ G  GE G +G+RG +G+ G+ G P            GPKGD G
Sbjct: 491 EPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG +GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG  G  G PG P 
Sbjct: 599 QLGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPG 640



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 87/186 (46%), Gaps = 30/186 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR--- 181
           G  G  G+ G RG KGA G +G PG QG  G+EG    +G++G  G QG PG +G R   
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGD---QGELGEVGDQGPPGPQGLRGIT 474

Query: 182 ---------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---- 222
                          G  G  G PG  G  G+ G PGE G +G  G  G  GIPG     
Sbjct: 475 GIVGDKGEKGARGFDGEPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSPGPK 534

Query: 223 --DGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
              GLP   G+DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  +    
Sbjct: 535 GDTGLPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAP 594

Query: 278 SETSQL 283
            +  QL
Sbjct: 595 GKPGQL 600



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 84/175 (48%), Gaps = 21/175 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E   PG  G +G +G  G  G  G KG  GEKG  G  G PG  G  G  
Sbjct: 547 GIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKP 606

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG------------------LDGRD 199
           G++GP G++G  GP+G+PG  G  GP+G  G PG++G                  + G  
Sbjct: 607 GQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDR 666

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRG 251
           G+ GEPG  G  G +G +G  G  G  G  G PG  G+    GE G+ GP G RG
Sbjct: 667 GVFGEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGIRG 721



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 77/176 (43%), Gaps = 54/176 (30%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   ++G  G+ G++G PG VGP GP+G+PG  G  GP+G  G 
Sbjct: 579 PGAKGVAGEKGNTGAPGKPGQLGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGI 638

Query: 169 PGP------------------------------------QGIPGDEGKRGPKGDMGYPGR 192
           PG                                     QG  G+EG+ G +GD+G  G+
Sbjct: 639 PGKLGSVGSPGLPGLPGPPGLPGMKGDRGVFGEPGPKGEQGASGEEGEAGARGDLGDMGQ 698

Query: 193 IGLDGRDGLPGEPGLDGIPGRNG---------------MDGIPGKDGLPGKDGIPG 233
            G  G  G PGEPGL G  G  G               M G  G  GLPG  G PG
Sbjct: 699 PGPKGSVGNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGMQGDQGATGLPGIQGPPG 754



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 83/171 (48%), Gaps = 18/171 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  G+ G+ G  G++G++G  G  G PG  G  G +G  G  GK G  G  G PG 
Sbjct: 549 PGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKPGQ 608

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------LDGIPGR 213
           QG PG+ G RGP+G  G  G +G +G  G+PG+ G                  + G  G 
Sbjct: 609 QGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDRGV 668

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G+ G  G++G  G  G  G+ G  GP+G+ G  G  G+ G   I
Sbjct: 669 FGEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGI 719



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G++G+RGP  +G  G PG  G+PGD G       
Sbjct: 812 QMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAIGLPGDPG------- 864

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 865 ---PASYGKNGRDGEQGPPGV 882



 Score = 43.5 bits (101), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGD+G  G +G PG    RGPKG         
Sbjct: 812 QMGIRGLPGIKGPPGALGL------RGPKGDLGEKGERGPPG----RGPKG--------- 852

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPG+PG     G+NG DG  G  G+
Sbjct: 853 LPGAIGLPGDPGPASY-GKNGRDGEQGPPGV 882


>gi|348581440|ref|XP_003476485.1| PREDICTED: collagen alpha-1(VII) chain-like [Cavia porcellus]
          Length = 2988

 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/152 (47%), Positives = 92/152 (60%), Gaps = 6/152 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG +G  G+ GE G  G +GV+G    +GE GAPG  G PGP G  G  G +G KGD+G+
Sbjct: 2554 PGDKGAKGEPGERGVAGSVGVRGLMGPKGEPGAPGTAGDPGPPGKDGAPGSQGDKGDVGF 2613

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             GP+GI   +G+RG KG  G  G  G  G  GLPG PGL G  G  G  G+PG+ G PGK
Sbjct: 2614 MGPRGI---KGERGVKGACGLDGEKGDKGEAGLPGRPGLAGRKGETGDPGVPGQSGAPGK 2670

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +G+ G  G  G  G +GP+G++G+ G  G PG
Sbjct: 2671 EGLIGPKGDRGFDGQSGPKGDQGEKGERGSPG 2702



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 93/174 (53%), Gaps = 16/174 (9%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKG----- 164
            P GL GP G +G+ G KG+ G  G +G+KG   V+ GPPGP+G  GD G+RGP+G     
Sbjct: 2486 PRGLMGPPGSRGDQGQKGDAGTAGPKGDKGDSAVIEGPPGPRGAKGDMGERGPRGLDGDQ 2545

Query: 165  ----DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                D G PG +G  G+ G+RG  G +G     GL G  G PG PG  G PG  G DG P
Sbjct: 2546 GPRGDSGNPGDKGAKGEPGERGVAGSVGV---RGLMGPKGEPGAPGTAGDPGPPGKDGAP 2602

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGTPAICAYKRES 271
            G  G  G  G  G  G  GE+G+ G     G +G  G  G+PG P +   K E+
Sbjct: 2603 GSQGDKGDVGFMGPRGIKGERGVKGACGLDGEKGDKGEAGLPGRPGLAGRKGET 2656



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 81/171 (47%), Gaps = 35/171 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG  G+       G PG  G++G  GD G PG  
Sbjct: 2612 GFMGPRGIKGERGVKGACGLDGEKGDKGEAGL------PGRPGLAGRKGETGDPGVPGQS 2665

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIP--------- 220
            G PG EG  GPKGD G+ G+ G  G  G  GE   PG+ G PG  G DG           
Sbjct: 2666 GAPGKEGLIGPKGDRGFDGQSGPKGDQGEKGERGSPGIGGFPGPRGNDGSSGPPGPPGSV 2725

Query: 221  ------GKDGLPGKDGIPGTN-----------GTNGEKGMTGPRGNRGKSG 254
                  G  G  G+ G PG +           G  GE+G  GP G RG+ G
Sbjct: 2726 GPRGPEGLQGQKGERGPPGESVVGAPGPPGTPGERGEQGRLGPPGPRGEKG 2776



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 93/205 (45%), Gaps = 64/205 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-------------------- 152
            GL GP G+KGE G  GE G  GE G+KGAPG+ G  G  G                    
Sbjct: 2328 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGLKGYKGDPGVGVQGPPGLTGPPGIKGDPG 2387

Query: 153  ---------IPGDEGKRGPKGDMGYPGP------QGIPGDE------------------G 179
                     I G  G+ GP+G++G PGP       G+PG E                  G
Sbjct: 2388 PPGSPGAPGIVGLPGQTGPRGEIGQPGPGGERGLAGLPGREGAPGPLGPPGLPGLPGAPG 2447

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
              G KGD G PG IGL G  G  GEPG+       G DG PG++G  G  G PG+ G  G
Sbjct: 2448 ASGLKGDKGDPG-IGLPGPRGERGEPGV------RGEDGHPGQEGPRGLMGPPGSRGDQG 2500

Query: 240  EK---GMTGPRGNRGKSG-INGVPG 260
            +K   G  GP+G++G S  I G PG
Sbjct: 2501 QKGDAGTAGPKGDKGDSAVIEGPPG 2525



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 83/174 (47%), Gaps = 46/174 (26%)

Query: 119  GQKGEIGAKGE--------MGVKGERGEKGAPGVVGP-----------------PGPQGI 153
            G+KGE G  G+         G KGE+G+ G PG  G                  PGP+G 
Sbjct: 1528 GEKGEPGRPGDPAIVTPTGAGAKGEKGDVGPPGPRGAAGVKGGPGPPGLAVPGDPGPKGD 1587

Query: 154  PGDEG------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP----- 202
            PGD+G      + GP GD G+PG +G PG  G  GP G  G  G++G  G +G P     
Sbjct: 1588 PGDQGPIGFTGRPGPPGDSGHPGEKGEPGRPGPSGPVGPQGRDGQVGEKGDEGPPGDPGL 1647

Query: 203  ----GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                GE GL G+P      G PG  G  G  G PG +G NG  G  GP+G+RG+
Sbjct: 1648 PGKSGERGLRGVP------GAPGPVGEKGDPGDPGEDGRNGIPGPVGPKGDRGE 1695



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 64/133 (48%), Gaps = 35/133 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------------APGV-----V 145
            PG  G +G+ G  G +GE G KGERGE+G                      PG       
Sbjct: 2043 PGQAGAVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVATDEPGAGLTREQ 2102

Query: 146  GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            GPPG          +G KG+ G  G QG+ GD G  G KGD G PG+ GLDG  GLPGE 
Sbjct: 2103 GPPG---------FKGAKGEPGRDGDQGLKGDRGVPGIKGDRGEPGQRGLDGSPGLPGER 2153

Query: 206  GLDGIPGRNGMDG 218
            G+ G  G+ G+ G
Sbjct: 2154 GVAGHEGKQGLQG 2166



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 87/197 (44%), Gaps = 55/197 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QGPIG  G  G  G+ G  GE+GE G PG  GP GPQG    +G+ G KGD G PG 
Sbjct: 1588 PGDQGPIGFTGRPGPPGDSGHPGEKGEPGRPGPSGPVGPQG---RDGQVGEKGDEGPPGD 1644

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------------------- 212
             G+PG  G+RG +G  G PG +G  G  G PGE G +GIPG                   
Sbjct: 1645 PGLPGKSGERGLRGVPGAPGPVGEKGDPGDPGEDGRNGIPGPVGPKGDRGEPGPPGLPGP 1704

Query: 213  ---------------------------------RNGMDGIPGKDGLPGKDGIPGTNGTNG 239
                                              +G  GI G  G PG  G PG  G  G
Sbjct: 1705 LVEAALGVREKGEPGERGQEGPRGPKGDPGPPGASGERGIDGLRGPPGLQGDPGVRGPAG 1764

Query: 240  EKGMTGPRGNRGKSGIN 256
            EKG  GP G  G+SG++
Sbjct: 1765 EKGDRGPTGLDGRSGLD 1781



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 86/203 (42%), Gaps = 49/203 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------ 159
            PG  GP G +G  G  GE G KGERG    PG VGP GP G+ G+ G             
Sbjct: 1470 PGFTGPKGDRGLAGPPGETGAKGERG---LPGPVGPQGPLGLAGNPGARGPEGPPGPAGR 1526

Query: 160  RGPKGDMGYPGPQGI--PGDEGKRGPKGDMGYPGRIGLDGRD--------------GLPG 203
            RG KG+ G PG   I  P   G +G KGD+G PG  G  G                G  G
Sbjct: 1527 RGEKGEPGRPGDPAIVTPTGAGAKGEKGDVGPPGPRGAAGVKGGPGPPGLAVPGDPGPKG 1586

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------GEKGMTGPRGNR------- 250
            +PG  G  G  G  G PG  G PG+ G PG  G +      G  G  G +G+        
Sbjct: 1587 DPGDQGPIGFTGRPGPPGDSGHPGEKGEPGRPGPSGPVGPQGRDGQVGEKGDEGPPGDPG 1646

Query: 251  -----GKSGINGVPGTPAICAYK 268
                 G+ G+ GVPG P     K
Sbjct: 1647 LPGKSGERGLRGVPGAPGPVGEK 1669



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 92/209 (44%), Gaps = 61/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG----------------------P 150
            GL+G  G  G +G KG+ G  GE G  G PG VGP G                       
Sbjct: 1655 GLRGVPGAPGPVGEKGDPGDPGEDGRNGIPGPVGPKGDRGEPGPPGLPGPLVEAALGVRE 1714

Query: 151  QGIPGDEGKR---------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
            +G PG+ G+                G +G  G  GP G+ GD G RGP G+ G  G  GL
Sbjct: 1715 KGEPGERGQEGPRGPKGDPGPPGASGERGIDGLRGPPGLQGDPGVRGPAGEKGDRGPTGL 1774

Query: 196  DGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPG---------------------KDGI 231
            DGR GL G+PG  G PG     G  G PG+DGLPG                     +DG 
Sbjct: 1775 DGRSGLDGKPGTPGPPGEPGAIGKAGEPGRDGLPGLRGEHGLPGPSGPPGAPGKPGEDGK 1834

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG NG NG+ G  G  G +G+ G +G PG
Sbjct: 1835 PGLNGKNGQPGDPGEAGRKGEKGESGAPG 1863



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 90/255 (35%), Gaps = 109/255 (42%)

Query: 112  PGLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            PG  GP+G +G  G  GE G              GERG +G PG  GP G +G PGD G+
Sbjct: 1618 PGPSGPVGPQGRDGQVGEKGDEGPPGDPGLPGKSGERGLRGVPGAPGPVGEKGDPGDPGE 1677

Query: 160  RG---------PKGDM----------------------GYPG------------------ 170
             G         PKGD                       G PG                  
Sbjct: 1678 DGRNGIPGPVGPKGDRGEPGPPGLPGPLVEAALGVREKGEPGERGQEGPRGPKGDPGPPG 1737

Query: 171  ------------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL----------------- 201
                        P G+ GD G RGP G+ G  G  GLDGR GL                 
Sbjct: 1738 ASGERGIDGLRGPPGLQGDPGVRGPAGEKGDRGPTGLDGRSGLDGKPGTPGPPGEPGAIG 1797

Query: 202  -PGEPGLDGIPGRNG------------------MDGIPGKDGLPGKDGIPGTNGTNGEKG 242
              GEPG DG+PG  G                   DG PG +G  G+ G PG  G  GEKG
Sbjct: 1798 KAGEPGRDGLPGLRGEHGLPGPSGPPGAPGKPGEDGKPGLNGKNGQPGDPGEAGRKGEKG 1857

Query: 243  MTGPRGNRGKSGING 257
             +G  G  G  G  G
Sbjct: 1858 ESGAPGREGHDGPKG 1872



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 80/197 (40%), Gaps = 61/197 (30%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVGPPGPQGIPG 155
            PPGLQG  G +G  G KG+ G  G  G  G               A G  G PG  G+PG
Sbjct: 1750 PPGLQGDPGVRGPAGEKGDRGPTGLDGRSGLDGKPGTPGPPGEPGAIGKAGEPGRDGLPG 1809

Query: 156  ---------------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
                                 ++GK G  G  G P   G PG+ G++G KG+ G PGR G
Sbjct: 1810 LRGEHGLPGPSGPPGAPGKPGEDGKPGLNGKNGQP---GDPGEAGRKGEKGESGAPGREG 1866

Query: 195  LDGRD---------------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             DG                       GLPG+ G  G+PG  G  G  G+ G  G+ G+PG
Sbjct: 1867 HDGPKGERGAPGGPGPQGPPGLPGQVGLPGQ-GFPGVPGSVGPKGDRGETGSKGQQGLPG 1925

Query: 234  TNGTNGEKGMTGPRGNR 250
              G  GE G   P  +R
Sbjct: 1926 ERGPRGEPGSVNPNVDR 1942



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 96/244 (39%), Gaps = 92/244 (37%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPG--VV 145
            PGL G +G+ G+ GA G  G  G+ G++                        G PG  +V
Sbjct: 2239 PGLPGQVGETGKPGAPGRDGANGKDGDRGGPGAPGLPGLPGPVGPKGEAGPMGPPGQVMV 2298

Query: 146  GPPGP---QGIPGDEG-----KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            GPPG    +G PGD       + GPKGD G PGP+G  G+ G+ G  GD G  G+ G  G
Sbjct: 2299 GPPGAKGEKGAPGDLAGDLVREPGPKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPG 2358

Query: 198  RDGLPGEPGLD-----------------------------GIPGRNGMD---GIPGKDGL 225
              G  G+PG+                              G+PG+ G     G PG  G 
Sbjct: 2359 LKGYKGDPGVGVQGPPGLTGPPGIKGDPGPPGSPGAPGIVGLPGQTGPRGEIGQPGPGGE 2418

Query: 226  PGKDGIPG---------------------TNGTNGEK-----GMTGPRGNRGKSGINGVP 259
             G  G+PG                      +G  G+K     G+ GPRG RG+ G+ G  
Sbjct: 2419 RGLAGLPGREGAPGPLGPPGLPGLPGAPGASGLKGDKGDPGIGLPGPRGERGEPGVRGED 2478

Query: 260  GTPA 263
            G P 
Sbjct: 2479 GHPG 2482



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 69/162 (42%), Gaps = 23/162 (14%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDE------------------GKRGPKGDMGYPGPQ 172
            G  G RGE G PG  G  G  G+PG E                  G  G KGD G PG  
Sbjct: 2402 GQTGPRGEIGQPGPGGERGLAGLPGREGAPGPLGPPGLPGLPGAPGASGLKGDKGDPG-I 2460

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---- 228
            G+PG  G+RG  G  G  G  G +G  GL G PG  G  G+ G  G  G  G  G     
Sbjct: 2461 GLPGPRGERGEPGVRGEDGHPGQEGPRGLMGPPGSRGDQGQKGDAGTAGPKGDKGDSAVI 2520

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            +G PG  G  G+ G  GPRG  G  G  G  G P     K E
Sbjct: 2521 EGPPGPRGAKGDMGERGPRGLDGDQGPRGDSGNPGDKGAKGE 2562



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 87/206 (42%), Gaps = 58/206 (28%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG--------------------- 164
            A GE G+ G RG    PG+ G PG +G  G++G RGP G                     
Sbjct: 1738 ASGERGIDGLRG---PPGLQGDPGVRGPAGEKGDRGPTGLDGRSGLDGKPGTPGPPGEPG 1794

Query: 165  ---DMGYPGPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLDGIPG 212
                 G PG  G+PG  G+ G  G  G P         G+ GL+G++G PG+PG  G  G
Sbjct: 1795 AIGKAGEPGRDGLPGLRGEHGLPGPSGPPGAPGKPGEDGKPGLNGKNGQPGDPGEAGRKG 1854

Query: 213  RNGMDGIPGKDGLPGKD---------------------GIPGTNGTNGEKGMTGPRGNRG 251
              G  G PG++G  G                       G+PG  G  G  G  GP+G+RG
Sbjct: 1855 EKGESGAPGREGHDGPKGERGAPGGPGPQGPPGLPGQVGLPG-QGFPGVPGSVGPKGDRG 1913

Query: 252  KSGINGVPGTPAICAYKRESCSLLPN 277
            ++G  G  G P     + E  S+ PN
Sbjct: 1914 ETGSKGQQGLPGERGPRGEPGSVNPN 1939



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 100/257 (38%), Gaps = 105/257 (40%)

Query: 106  TKEYCPPGLQGPIGQ------------KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            T+E  PPG +G  G+            +G  G KG+ G  G+RG  G+PG+   PG +G+
Sbjct: 2099 TREQGPPGFKGAKGEPGRDGDQGLKGDRGVPGIKGDRGEPGQRGLDGSPGL---PGERGV 2155

Query: 154  PGDEGKRGPKGDMGYP---------------------------GPQGIPGD--------- 177
             G EGK+G +G  G P                           GP+G PG+         
Sbjct: 2156 AGHEGKQGLQGPRGAPGPVGGHGDPGPPGAPGLTGPVGPQGPSGPKGEPGETGPPGRGLP 2215

Query: 178  --------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------ 217
                           G  GP+G  G PG++G  G+   PG PG DG  G++G        
Sbjct: 2216 GPVGPVGLPGPPGSSGLVGPQGAPGLPGQVGETGK---PGAPGRDGANGKDGDRGGPGAP 2272

Query: 218  ------------------GIPGK-----DGLPGKDGIPG--------TNGTNGEKGMTGP 246
                              G PG+      G  G+ G PG          G  G++G+ GP
Sbjct: 2273 GLPGLPGPVGPKGEAGPMGPPGQVMVGPPGAKGEKGAPGDLAGDLVREPGPKGDRGLPGP 2332

Query: 247  RGNRGKSGINGVPGTPA 263
            RG +G++G  G PG P 
Sbjct: 2333 RGEKGEAGRAGEPGDPG 2349



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 85/221 (38%), Gaps = 77/221 (34%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA-------------- 141
            L+ M   C  +K    PG QGP G++G IG  GE G+KG+RG+ G               
Sbjct: 1968 LLPMPDRCRGSKGD--PGQQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALAERGPP 2025

Query: 142  -----------PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                       PG+ G PG  G  G+ G+               PG+ G+RG KG+ G  
Sbjct: 2026 GPPGLAGEPGKPGIPGLPGQAGAVGEAGR---------------PGERGERGEKGERGEQ 2070

Query: 191  GR-----------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            GR                        GL    G PG  G  G PGR+G        GL G
Sbjct: 2071 GRDGLPGLPGPPGPPGPKVATDEPGAGLTREQGPPGFKGAKGEPGRDG------DQGLKG 2124

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G+PG  G  GE G       RG  G  G+PG   +  ++
Sbjct: 2125 DRGVPGIKGDRGEPG------QRGLDGSPGLPGERGVAGHE 2159



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 91/224 (40%), Gaps = 70/224 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----GP--PGPQG------------- 152
            PGL+G  G  G  GA GE G +G +GE G PG V    GP  PG +G             
Sbjct: 1319 PGLKGSPGLPGPRGAPGEQGPRGLKGEPGEPGYVTGDLGPALPGRKGEPGPSGPPGPRGP 1378

Query: 153  ----------------IPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGPKGDM 187
                            + GD+G RG +G           G PG  G+PG+ G +GP G  
Sbjct: 1379 SGGLGPRGPPGLPGSAVKGDKGDRGERGPPGPGVGGTASGEPGLPGLPGNPGPQGPVGPA 1438

Query: 188  GYPGRIGL--------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            G  G  G+               G  GL G PG  G  G  G+ G PG+ G  G+ G+PG
Sbjct: 1439 GEKGEKGVCEDGAPGLPGQPGPPGDLGLRGLPGFTGPKGDRGLAGPPGETGAKGERGLPG 1498

Query: 234  TNGTNGEKGMTG------------PRGNRGKSGINGVPGTPAIC 265
              G  G  G+ G            P G RG+ G  G PG PAI 
Sbjct: 1499 PVGPQGPLGLAGNPGARGPEGPPGPAGRRGEKGEPGRPGDPAIV 1542



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 86/226 (38%), Gaps = 84/226 (37%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------VGPPGPQGIPGDEGK 159
            PG  G  G+KGE GA G  G  G +GE+GAPG             VG PG QG PG  G 
Sbjct: 1847 PGEAGRKGEKGESGAPGREGHDGPKGERGAPGGPGPQGPPGLPGQVGLPG-QGFPGVPGS 1905

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------------------------------ 189
             GPKGD G  G +G  G  G+RGP+G+ G                               
Sbjct: 1906 VGPKGDRGETGSKGQQGLPGERGPRGEPGSVNPNVDRILETVGIKTSVLREIVETWDESS 1965

Query: 190  ----------PGRIGLDGRDGLPGEPGLDGIPGRNGMDG--------------------- 218
                       G  G  G+ G PG+ G  G PG  G+ G                     
Sbjct: 1966 GSLLPMPDRCRGSKGDPGQQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALAERGPP 2025

Query: 219  -------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                    PGK G+P   G+PG  G  GE G  G RG RG+ G  G
Sbjct: 2026 GPPGLAGEPGKPGIP---GLPGQAGAVGEAGRPGERGERGEKGERG 2068



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 78/224 (34%), Gaps = 87/224 (38%)

Query: 127  KGEMGVKGER------------GEKGAPGVVGPPGPQGIPGDEGKRG------------- 161
            KG+ G +GER            GE G PG+ G PGPQG  G  G++G             
Sbjct: 1396 KGDKGDRGERGPPGPGVGGTASGEPGLPGLPGNPGPQGPVGPAGEKGEKGVCEDGAPGLP 1455

Query: 162  -------------------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--- 199
                               PKGD G  GP G  G +G+RG  G +G  G +GL G     
Sbjct: 1456 GQPGPPGDLGLRGLPGFTGPKGDRGLAGPPGETGAKGERGLPGPVGPQGPLGLAGNPGAR 1515

Query: 200  ------------GLPGEPGLDGIP-----------GRNGMDGIPGKDGL----------- 225
                        G  GEPG  G P           G  G  G PG  G            
Sbjct: 1516 GPEGPPGPAGRRGEKGEPGRPGDPAIVTPTGAGAKGEKGDVGPPGPRGAAGVKGGPGPPG 1575

Query: 226  ------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                  PG  G PG  G  G  G  GP G+ G  G  G PG P 
Sbjct: 1576 LAVPGDPGPKGDPGDQGPIGFTGRPGPPGDSGHPGEKGEPGRPG 1619


>gi|403280146|ref|XP_003931592.1| PREDICTED: macrophage receptor MARCO [Saimiri boliviensis
           boliviensis]
          Length = 520

 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 101/204 (49%), Gaps = 33/204 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD GK GP       
Sbjct: 235 GLTGPKGETGAKGDKGDLGLPGGKGDRGMKGDAGVMGPPGAQGSKGDSGKPGPPGLAGFP 294

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMD 217
             KGD G PG QG+PG  G  G  G  G PG I   GL G  G PG PG  G+ G  G  
Sbjct: 295 GAKGDQGQPGVQGVPGPPGAVGRPGTKGEPGSIGSPGLTGLPGSPGSPGAAGLKGSKGDT 354

Query: 218 GIPGKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+ G+ G  G+ G+PG  G  GE         KG  GP G +G  G  G PG   +   K
Sbjct: 355 GLQGQQGSKGESGVPGPPGVKGERGSPGLAGPKGAPGPAGQKGDKGAKGSPGEQGVKGAK 414

Query: 269 RESCSLLPNSETSQLLIPPTIVGS 292
                     ET    +P  IVGS
Sbjct: 415 ---------GETGDNSLPVRIVGS 429



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/170 (47%), Positives = 93/170 (54%), Gaps = 18/170 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +GE+G KG  G+ GP G  G         +PG +G RG K
Sbjct: 205 GLQGPQGAPGKQGATGAPGPQGEKGSKGDGGLTGPKGETGAKGDKGDLGLPGGKGDRGMK 264

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMD 217
           GD   MG PG QG  GD GK GP G  G+PG  G  G+    G+PG PG  G PG  G  
Sbjct: 265 GDAGVMGPPGAQGSKGDSGKPGPPGLAGFPGAKGDQGQPGVQGVPGPPGAVGRPGTKGEP 324

Query: 218 ---GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G PG  GLPG  G PG  G  G KG TG +G +G  G +GVPG P +
Sbjct: 325 GSIGSPGLTGLPGSPGSPGAAGLKGSKGDTGLQGQQGSKGESGVPGPPGV 374



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 80/155 (51%), Gaps = 9/155 (5%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G+ G  G  G  G +G++G PGV G PGP G  G  G +G  G +G PG
Sbjct: 272 PPGAQGSKGDSGKPGPPGLAGFPGAKGDQGQPGVQGVPGPPGAVGRPGTKGEPGSIGSPG 331

Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G+PG  G       +G KGD G  G+ G  G  G+PG P   G+ G  G  G+ G  G
Sbjct: 332 LTGLPGSPGSPGAAGLKGSKGDTGLQGQQGSKGESGVPGPP---GVKGERGSPGLAGPKG 388

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            PG  G  G  G  G  G  G +G +G++G N +P
Sbjct: 389 APGPAGQKGDKGAKGSPGEQGVKGAKGETGDNSLP 423



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 75/163 (46%), Gaps = 36/163 (22%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGE G++G +G  G  G  G PGPQG      ++G KGD G  GP+G      + G KGD
Sbjct: 201 KGEAGLQGPQGAPGKQGATGAPGPQG------EKGSKGDGGLTGPKG------ETGAKGD 248

Query: 187 ---------------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                                MG PG  G  G  G PG PGL G PG  G  G PG  G+
Sbjct: 249 KGDLGLPGGKGDRGMKGDAGVMGPPGAQGSKGDSGKPGPPGLAGFPGAKGDQGQPGVQGV 308

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           PG  G  G  GT GE G     G+ G +G+ G PG+P     K
Sbjct: 309 PGPPGAVGRPGTKGEPGSI---GSPGLTGLPGSPGSPGAAGLK 348



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQ 151
             QG    + +  PPGL G  G KG+ G  G  GV G        G KG PG +G PG  
Sbjct: 274 GAQGSKGDSGKPGPPGLAGFPGAKGDQGQPGVQGVPGPPGAVGRPGTKGEPGSIGSPGLT 333

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G  G  G  G  G  G+   +G++G KG+ G PG  G+ G  G PG  G  G P
Sbjct: 334 GLPGSPGSPGAAGLKGSKGDTGL---QGQQGSKGESGVPGPPGVKGERGSPGLAGPKGAP 390

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           G  G  G  G  G PG+ G+ G  G  G+
Sbjct: 391 GPAGQKGDKGAKGSPGEQGVKGAKGETGD 419



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 68/138 (49%), Gaps = 6/138 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + GF  +  +   PG+QG  G  G +G     G KGE G  G+PG+ G PG  G PG  
Sbjct: 289 GLAGFPGAKGDQGQPGVQGVPGPPGAVG---RPGTKGEPGSIGSPGLTGLPGSPGSPGAA 345

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G +G KGD G  G QG  G+ G  GP   KG+ G PG  G  G  G  G+ G  G  G  
Sbjct: 346 GLKGSKGDTGLQGQQGSKGESGVPGPPGVKGERGSPGLAGPKGAPGPAGQKGDKGAKGSP 405

Query: 215 GMDGIPGKDGLPGKDGIP 232
           G  G+ G  G  G + +P
Sbjct: 406 GEQGVKGAKGETGDNSLP 423



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 84/181 (46%), Gaps = 36/181 (19%)

Query: 116 GPIGQKGEIGAKGEMGVKGE------------RGEKGAPGVVG---------PPGPQGIP 154
           G  G KGE GA G  G+KG               EKGA G  G         P GP G+ 
Sbjct: 142 GMFGIKGERGAPGLQGLKGHMGMPGAPGLPGPPSEKGAKGATGHNGATGPPGPQGPPGVK 201

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ G +GP+G  G  G  G PG +G++G KGD G     G  G  G  G+ G  G+PG  
Sbjct: 202 GEAGLQGPQGAPGKQGATGAPGPQGEKGSKGDGGL---TGPKGETGAKGDKGDLGLPGGK 258

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPGTPAIC 265
           G  G+ G  G+ G    PG  G+ G+ G  GP         +G++G+ G+ GVPG P   
Sbjct: 259 GDRGMKGDAGVMGP---PGAQGSKGDSGKPGPPGLAGFPGAKGDQGQPGVQGVPGPPGAV 315

Query: 266 A 266
            
Sbjct: 316 G 316


>gi|397496732|ref|XP_003819182.1| PREDICTED: macrophage receptor MARCO isoform 1 [Pan paniscus]
          Length = 520

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/170 (45%), Positives = 95/170 (55%), Gaps = 18/170 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +G++G KG  G++GP G  G         +PG +G RG K
Sbjct: 205 GLQGPQGAPGKQGATGTPGPQGQKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMK 264

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRN--- 214
           GD   MG PG QG  GD G+ GP G  G+PG  G  G+ GL   PG PG  G PG     
Sbjct: 265 GDSGVMGPPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 324

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G PG+ GLPG  G PG  G  G KG TG +G +G+ G +GVPG   +
Sbjct: 325 GSAGSPGQAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGV 374



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 102/193 (52%), Gaps = 21/193 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD G+ GP       
Sbjct: 235 GLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDSGVMGPPGAQGSKGDSGRPGPPGLAGFP 294

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD 217
             KGD G PG QG+PG  G  G  G  G PG  G  G+ GL   PG PG  G+ G  G  
Sbjct: 295 GAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGQAGLPGSPGSPGATGLKGSKGDT 354

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPR---GNRGKSGINGVPGTPAICAYKRES 271
           G+ G+ G  G+ G+PG  G  GE+   G+ GP+   G  G+ G  GV G+      K E 
Sbjct: 355 GLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPGQAGQKGDQGVKGSSGEQGVKGEK 414

Query: 272 CSLLPNSETSQLL 284
                NS + +++
Sbjct: 415 GERGENSVSVRIV 427



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G  G  G  G +G++G PG+ G PGP G  G  G +G  G  G PG
Sbjct: 272 PPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPG 331

Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G+PG  G       +G KGD G  G+ G  G  G+PG  G+ G  G  G+ G  G  G
Sbjct: 332 QAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPG 391

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G+ G  G  G++GE+G+ G +G RG++ ++
Sbjct: 392 QAGQKGDQGVKGSSGEQGVKGEKGERGENSVS 423



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 74/150 (49%), Gaps = 27/150 (18%)

Query: 143 GVVGPPGPQGIPGD---------EGKRGPKGDMGYPGPQ------------GIPGDEGKR 181
           G  G  GPQG PG          +G++G KGD G  GP+            G+PG +G R
Sbjct: 202 GEAGLQGPQGAPGKQGATGTPGPQGQKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDR 261

Query: 182 GPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G KGD   MG PG  G  G  G PG PGL G PG  G  G PG  G+PG    PG  G  
Sbjct: 262 GMKGDSGVMGPPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGP---PGAVGHP 318

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G KG  G  G+ G++G+ G PG+P     K
Sbjct: 319 GAKGEPGSAGSPGQAGLPGSPGSPGATGLK 348



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 15/124 (12%)

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           + G+ G +GP+G  G  G  G PG +G++G KGD G    IG  G  G  GE G  G+PG
Sbjct: 200 VKGEAGLQGPQGAPGKQGATGTPGPQGQKGSKGDGGL---IGPKGETGTKGEKGDLGLPG 256

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPGTPA 263
             G  G+ G  G+ G    PG  G+ G+ G  GP         +G++G+ G+ GVPG P 
Sbjct: 257 SKGDRGMKGDSGVMGP---PGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPG 313

Query: 264 ICAY 267
              +
Sbjct: 314 AVGH 317



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 56/141 (39%), Gaps = 33/141 (23%)

Query: 164 GDMGYPGPQGIPGDEG------------------KRGPKGDMG---------------YP 190
           G  G  G QG PG +G                  ++G KG  G                 
Sbjct: 142 GMFGIKGEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAAGRDGATGPPGPQGPPGVK 201

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  GL G  G PG+ G  G PG  G  G  G  GL G  G  GT G  G+ G+ G +G+R
Sbjct: 202 GEAGLQGPQGAPGKQGATGTPGPQGQKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDR 261

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  G +GV G P     K +S
Sbjct: 262 GMKGDSGVMGPPGAQGSKGDS 282


>gi|296108289|ref|YP_003619990.1| tail fiber protein [Legionella pneumophila 2300/99 Alcoy]
 gi|295650191|gb|ADG26038.1| tail fiber protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 460

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 104/200 (52%), Gaps = 22/200 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G KGE G +G  G KG+RGE G+ G+ GP G QG  G +G  GPKGD G
Sbjct: 118 EAGPQGLPGPKGDKGETGPQGLPGKKGDRGEAGSQGLPGPKGDQGEAGPQGLPGPKGDQG 177

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 178 EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRG 237

Query: 219 IPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPAICA 266
             G  GLP         G  G+PG  G  GE   +G+ GP+G++G++G  G  G P    
Sbjct: 238 EAGPQGLPGPKGDRGEAGPQGVPGPKGDRGEAGPQGLPGPKGDKGETGAVGPQGMPGPKG 297

Query: 267 YKRESCSLLP-NSETSQLLI 285
              +    +P   ET Q+L 
Sbjct: 298 EAGDDGQGVPAGGETGQVLA 317



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 96/174 (55%), Gaps = 21/174 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG++GE G  G+ GP G QG  G +G  GPKGD G
Sbjct: 73  EAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDKG 132

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 133 ETGPQGLPGKKGDRGEAGSQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRG 192

Query: 219 IPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
             G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 193 EAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPG 246



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/177 (44%), Positives = 96/177 (54%), Gaps = 27/177 (15%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRG 161
           E  P GL GP G +GE G +G  G KG++GE G  G+ GP G      PQG+PG +G RG
Sbjct: 88  EAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDKGETGPQGLPGKKGDRG 147

Query: 162 ---------PKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPG 203
                    PKGD G  GPQG+PG +G +         GPKGD G  G  GL G  G  G
Sbjct: 148 EAGSQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRG 207

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           E G  G+PG  G  G  G  GLPG     G  G  G +G+ GP+G+RG++G  GVPG
Sbjct: 208 EAGPQGLPGPKGDQGEAGPQGLPGPK---GDRGEAGPQGLPGPKGDRGEAGPQGVPG 261



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 92/166 (55%), Gaps = 15/166 (9%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            P G QGP G KGE G KG+ G          KG++GE G  G+ GP G QG  G +G  
Sbjct: 51  IPSGPQGPKGDKGEAGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLP 110

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GPKGD G  GPQG+PG +G +G  G  G PG+ G  G  G  G PG  G  G  G  G+P
Sbjct: 111 GPKGDQGEAGPQGLPGPKGDKGETGPQGLPGKKGDRGEAGSQGLPGPKGDQGEAGPQGLP 170

Query: 221 ---GKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
              G  G  G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 171 GPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG 216


>gi|313226172|emb|CBY21315.1| unnamed protein product [Oikopleura dioica]
          Length = 1198

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 98/179 (54%), Gaps = 21/179 (11%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVV 145
           G    + +  P G  GP+G+ G  G+KGE G                KGE G +G  G +
Sbjct: 698 GLKGESGDQGPSGPTGPLGKPGRTGSKGEPGEAGTAGISGIPGGIGAKGEVGPRGNQGQI 757

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GPPG  G  GD G+ G  GD G PG QG  G EG++G KGD G  G+ G+ G+ G PG+ 
Sbjct: 758 GPPGTNGGKGDPGQSGVPGDRGEPGAQGREGKEGEKGSKGDSGPEGQPGIPGKTGRPGDA 817

Query: 206 G------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G        G+PG+NG+DG  G  G+ G +GI G  G  G+KG  GP+G++G +G+ G+
Sbjct: 818 GPTGVQGTQGLPGKNGLDGARGDAGIDGANGISGLPGPAGQKGEPGPKGDKGHAGLTGL 876



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 85/183 (46%), Gaps = 26/183 (14%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP--------- 148
            ++GF     E+ P G  G  G  G  G  G  G  G  G  G PGVVG P         
Sbjct: 498 GIRGFQGIQGEHGPHGPHGRPGVMGSTGIPGLPGQPGVDGLPGHPGVVGKPGNKGPNGVK 557

Query: 149 ------GPQGIPGDEGKR--------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
                 GP G+PG +G          GP G  G  GPQGIPGD G+ G  GD G PG  G
Sbjct: 558 GFHGEKGPPGLPGKDGNPGHPGVRVIGPAGATGEKGPQGIPGDPGQIGNPGDRGLPGAAG 617

Query: 195 LDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           + G  G  GEPG     G PG  G  G PGK G+ G  G  G +G  G +G  G +GN+G
Sbjct: 618 VSGSKGDRGEPGELGPQGSPGEAGDTGDPGKPGVQGPKGDKGDSGIPGPQGPIGEKGNQG 677

Query: 252 KSG 254
           + G
Sbjct: 678 QRG 680



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 96/232 (41%), Gaps = 66/232 (28%)

Query: 95  PLVAMQGFCNSTKEYCP---PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---P 148
           P V + G   +T E  P   PG  G IG  G+ G  G  GV G +G++G PG +GP   P
Sbjct: 578 PGVRVIGPAGATGEKGPQGIPGDPGQIGNPGDRGLPGAAGVSGSKGDRGEPGELGPQGSP 637

Query: 149 GPQGIPGDEGK------RGPKGDMGYPGPQGI---------------------------- 174
           G  G  GD GK      +G KGD G PGPQG                             
Sbjct: 638 GEAGDTGDPGKPGVQGPKGDKGDSGIPGPQGPIGEKGNQGQRGYQGEQGPPGGQGLPGTT 697

Query: 175 -----PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------------------GLD 208
                 GD+G  GP G +G PGR G  G  G  G                       G  
Sbjct: 698 GLKGESGDQGPSGPTGPLGKPGRTGSKGEPGEAGTAGISGIPGGIGAKGEVGPRGNQGQI 757

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG NG  G PG+ G+PG  G PG  G  G++G  G +G+ G  G  G+PG
Sbjct: 758 GPPGTNGGKGDPGQSGVPGDRGEPGAQGREGKEGEKGSKGDSGPEGQPGIPG 809



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 84/164 (51%), Gaps = 14/164 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G++G  G +GE G  G  G  G  G  G PG+ G PG  G+PG  G  G  G+ G   P 
Sbjct: 498 GIRGFQGIQGEHGPHGPHGRPGVMGSTGIPGLPGQPGVDGLPGHPGVVGKPGNKG---PN 554

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGL--------PGEPGLDGIPGRNGMDGIPGKDG 224
           G+ G  G++GP    G PG+ G  G  G+         GE G  GIPG  G  G PG  G
Sbjct: 555 GVKGFHGEKGPP---GLPGKDGNPGHPGVRVIGPAGATGEKGPQGIPGDPGQIGNPGDRG 611

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           LPG  G+ G+ G  GE G  GP+G+ G++G  G PG P +   K
Sbjct: 612 LPGAAGVSGSKGDRGEPGELGPQGSPGEAGDTGDPGKPGVQGPK 655



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 92/223 (41%), Gaps = 71/223 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPG------PQGIPGDEGKRGPK 163
           PG +GP G KG  G KG  G+ G+ G  G PGV  +GP G      PQGIPGD G+ G  
Sbjct: 548 PGNKGPNGVKGFHGEKGPPGLPGKDGNPGHPGVRVIGPAGATGEKGPQGIPGDPGQIGNP 607

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           GD G PG  G+ G +G RG  G++G  G  G  G  G PG+PG+ G  G  G  GIPG  
Sbjct: 608 GDRGLPGAAGVSGSKGDRGEPGELGPQGSPGEAGDTGDPGKPGVQGPKGDKGDSGIPGPQ 667

Query: 224 GLPGKDG------------------------------------------IPGTNGTNGE- 240
           G  G+ G                                           PG  G+ GE 
Sbjct: 668 GPIGEKGNQGQRGYQGEQGPPGGQGLPGTTGLKGESGDQGPSGPTGPLGKPGRTGSKGEP 727

Query: 241 -----------------KGMTGPRGNRGK---SGINGVPGTPA 263
                            KG  GPRGN+G+    G NG  G P 
Sbjct: 728 GEAGTAGISGIPGGIGAKGEVGPRGNQGQIGPPGTNGGKGDPG 770



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 79/179 (44%), Gaps = 38/179 (21%)

Query: 108 EYCPPGLQGPIGQKGEIGAK--GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           E  PPGL G  G  G  G +  G  G  GE+G             QGIPGD G+ G  GD
Sbjct: 562 EKGPPGLPGKDGNPGHPGVRVIGPAGATGEKGP------------QGIPGDPGQIGNPGD 609

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G PG  G+ G +G RG  G++G  G  G  G  G PG+PG+ G  G  G  GIPG  G 
Sbjct: 610 RGLPGAAGVSGSKGDRGEPGELGPQGSPGEAGDTGDPGKPGVQGPKGDKGDSGIPGPQGP 669

Query: 226 PGKD------------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+                         G+ G +G  G  G TGP G  G++G  G PG
Sbjct: 670 IGEKGNQGQRGYQGEQGPPGGQGLPGTTGLKGESGDQGPSGPTGPLGKPGRTGSKGEPG 728



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 79/184 (42%), Gaps = 56/184 (30%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------IPGDE- 178
           + GE G  G PG+ G PGP G  G  G+ G  G  G PGP G            +PGD+ 
Sbjct: 423 LPGEPGPYGDPGLPGIPGPTGQVGRGGRAGKNGLRGPPGPNGLKGTGGTPGYPGVPGDKG 482

Query: 179 ------------------------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                                   G+ GP G  G PG +G  G  GLPG+PG+DG+PG  
Sbjct: 483 HLGPPGPPGDRAGPKGIRGFQGIQGEHGPHGPHGRPGVMGSTGIPGLPGQPGVDGLPGHP 542

Query: 215 GMDGIPGKD---------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G+ G PG                 GLPGKDG PG  G      + GP G  G+ G  G+P
Sbjct: 543 GVVGKPGNKGPNGVKGFHGEKGPPGLPGKDGNPGHPGVR----VIGPAGATGEKGPQGIP 598

Query: 260 GTPA 263
           G P 
Sbjct: 599 GDPG 602



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 76/146 (52%), Gaps = 6/146 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G +G  G +GE G KG+ G +G PG+   PG  G PGD G  G +G  G PG 
Sbjct: 775 PGDRGEPGAQGREGKEGEKGSKGDSGPEGQPGI---PGKTGRPGDAGPTGVQGTQGLPGK 831

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G+   +G RG  G  G  G  GL G  G  GEPG  G  G  G+ G+ G  G  G  G 
Sbjct: 832 NGL---DGARGDAGIDGANGISGLPGPAGQKGEPGPKGDKGHAGLTGLTGPPGPEGPQGN 888

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G  G+ GP+G++G +G  G
Sbjct: 889 RGAQGYLGPIGLLGPKGSQGPTGPKG 914



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 82/203 (40%), Gaps = 67/203 (33%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  G+ G  G+ G +G +G+P + GPPGP G  G+ G  GP G  G    QG+PG+ G  
Sbjct: 374 GPPGSDGRDGLDGAQGVQGSPALQGPPGPVGFTGNPGPTGPGGKQGK---QGLPGEPG-- 428

Query: 182 GPKGDMGYP---------GRIGLDGRDGLPGEPGLDGI---------------------- 210
            P GD G P         GR G  G++GL G PG +G+                      
Sbjct: 429 -PYGDPGLPGIPGPTGQVGRGGRAGKNGLRGPPGPNGLKGTGGTPGYPGVPGDKGHLGPP 487

Query: 211 ------------------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                                         PG  G  GIPG  G PG DG+PG  G  G+
Sbjct: 488 GPPGDRAGPKGIRGFQGIQGEHGPHGPHGRPGVMGSTGIPGLPGQPGVDGLPGHPGVVGK 547

Query: 241 KGMTGPRGNRGKSGINGVPGTPA 263
            G  GP G +G  G  G PG P 
Sbjct: 548 PGNKGPNGVKGFHGEKGPPGLPG 570


>gi|5231092|gb|AAD41064.1| macrophage receptor [Homo sapiens]
          Length = 520

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/170 (46%), Positives = 95/170 (55%), Gaps = 18/170 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +GE+G KG  G++GP G  G         +PG +G RG K
Sbjct: 205 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMK 264

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNG-- 215
           GD   MG PG QG  GD G+ GP G  G+PG  G  G+ GL   PG PG  G PG  G  
Sbjct: 265 GDAGVMGPPGAQGSKGDFGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 324

Query: 216 -MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G PG+ GLPG  G PG  G  G KG TG +G +G+ G +GVPG   +
Sbjct: 325 GSAGSPGRAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGV 374



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 102/193 (52%), Gaps = 21/193 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD G+ GP       
Sbjct: 235 GLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQGSKGDFGRPGPPGLAGFP 294

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD 217
             KGD G PG QG+PG  G  G  G  G PG  G  GR GL   PG PG  G+ G  G  
Sbjct: 295 GAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGSKGDT 354

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPR---GNRGKSGINGVPGTPAICAYKRES 271
           G+ G+ G  G+ G+PG  G  GE+   G+ GP+   G  G+ G  GV G+      K E 
Sbjct: 355 GLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPGQAGQKGDQGVKGSSGEQGVKGEK 414

Query: 272 CSLLPNSETSQLL 284
                NS + +++
Sbjct: 415 GERGENSVSVRIV 427



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 86/176 (48%), Gaps = 33/176 (18%)

Query: 123 EIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E GAKG MG               VKGE G +G  G  G  G  G PG +G++G KGD G
Sbjct: 176 EKGAKGAMGRDGATGPSGPQGPPGVKGEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGG 235

Query: 168 YPGPQ------------GIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPG 212
             GP+            G+PG +G RG KGD   MG PG  G  G  G PG PGL G PG
Sbjct: 236 LIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQGSKGDFGRPGPPGLAGFPG 295

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G PG  G+PG    PG  G  G KG  G  G+ G++G+ G PG+P     K
Sbjct: 296 AKGDQGQPGLQGVPGP---PGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLK 348



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G  G  G  G +G++G PG+ G PGP G  G  G +G  G  G PG
Sbjct: 272 PPGAQGSKGDFGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPG 331

Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G+PG  G       +G KGD G  G+ G  G  G+PG  G+ G  G  G+ G  G  G
Sbjct: 332 RAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPG 391

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G+ G  G  G++GE+G+ G +G RG++ ++
Sbjct: 392 QAGQKGDQGVKGSSGEQGVKGEKGERGENSVS 423



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 52/132 (39%), Gaps = 33/132 (25%)

Query: 170 GPQGIPGDEG------------------KRGPKGDMG---------------YPGRIGLD 196
           G QG PG +G                  ++G KG MG                 G  GL 
Sbjct: 148 GEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAMGRDGATGPSGPQGPPGVKGEAGLQ 207

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G PG+ G  G PG  G  G  G  GL G  G  GT G  G+ G+ G +G+RG  G  
Sbjct: 208 GPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDA 267

Query: 257 GVPGTPAICAYK 268
           GV G P     K
Sbjct: 268 GVMGPPGAQGSK 279


>gi|355558139|gb|EHH14919.1| hypothetical protein EGK_00927 [Macaca mulatta]
          Length = 1661

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/156 (48%), Positives = 92/156 (58%), Gaps = 4/156 (2%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERG-EKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            PGL+G  GQ+G   E G +GE G+KGERG EKG  G  GP G  GIPG +G  GPKG  G
Sbjct: 1186 PGLRGATGQQGPPGEPGDQGEQGLKGERGCEKGKKGAPGPSGKAGIPGLQGLPGPKGIQG 1245

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            Y G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+ G PG  G  G
Sbjct: 1246 YHGADGILGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKG 1305

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            + G+PG  G  G +G  G +G++G  G  G+ G P 
Sbjct: 1306 EQGLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQPG 1341



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 107/241 (44%), Gaps = 54/241 (22%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGP 150
            V  QG      E  P GL G +G  G IG KGE      +G +GE+G  G  G  GPPG 
Sbjct: 837  VGDQGNIGKIGETGPVGLPGEVGTTGSIGEKGERGSPGPLGPQGEKGVMGHVGARGPPGS 896

Query: 151  QGI----------------------PGDEGKRGP------------KGDMGYPGPQGIPG 176
            QG                        GD+GKRGP            +G  G PG QG+PG
Sbjct: 897  QGPKGQRRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQGKPGLQGLPG 956

Query: 177  DEGKR--------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
              G R              GP G+MG  G  G++G  GL GEPG  G PG  G +G+ GK
Sbjct: 957  STGDRGLPGEPLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGEPGAPGEEGLQGK 1016

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
            DGL G  G+PG +G  G+ G+ G  G  G+SG  G+PG   I     +   L    +  Q
Sbjct: 1017 DGLKGGRGLPGEDGEKGDMGLPGIIGPLGRSGQMGLPGPEGIVGIPGQRGRLGKKGDKGQ 1076

Query: 283  L 283
            +
Sbjct: 1077 I 1077



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 99/185 (53%), Gaps = 23/185 (12%)

Query: 98   AMQGFCNSTKEYCPPG-----LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
             +QG   ST +   PG     LQG +G  GE+G +G  G++GE G +G PG  G PG  G
Sbjct: 950  GLQGLPGSTGDRGLPGEPLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGEPGAPG 1009

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDG 209
              G +GK G KG       +G+PG++G+   KGDMG PG IG  GR    GLPG  G+ G
Sbjct: 1010 EEGLQGKDGLKGG------RGLPGEDGE---KGDMGLPGIIGPLGRSGQMGLPGPEGIVG 1060

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGTPA 263
            IPG+ G  G  G  G  G  G  G+ G+ G+ G +GP+G RG        G+ G  G P 
Sbjct: 1061 IPGQRGRLGKKGDKGQIGPTGEVGSRGSPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPG 1120

Query: 264  ICAYK 268
            I  Y+
Sbjct: 1121 IPGYR 1125



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 95/176 (53%), Gaps = 17/176 (9%)

Query: 112  PGLQGPIGQKGEIGAKGE----------------MGVKGERGEKGAPGVVGPPGPQGIPG 155
            PGL G  G KGE G  GE                +G +GERGE GA G  G  G  G+ G
Sbjct: 1131 PGLSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRG 1190

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEG-KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
              G++GP G+ G  G QG+ G+ G ++G KG  G  G+ G+ G  GLPG  G+ G  G +
Sbjct: 1191 ATGQQGPPGEPGDQGEQGLKGERGCEKGKKGAPGPSGKAGIPGLQGLPGPKGIQGYHGAD 1250

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+ G PGK G PGK G+PG  G+ G  G+ G  G  G  G +G+PG+P I   K E
Sbjct: 1251 GILGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGE 1306



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 92/175 (52%), Gaps = 21/175 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E  P GL+G +G +G IG  GE G  G  GE G  G +G  G +G PG  G +G KG MG
Sbjct: 827  EPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGTTGSIGEKGERGSPGPLGPQGEKGVMG 886

Query: 168  YPGPQGIPGDEG----KRGP---------------KGDMGYPGRIGLDGRDGLPGEPGLD 208
            + G +G PG +G    +RGP               KGD G  G  GL G+ G PGE G+ 
Sbjct: 887  HVGARGPPGSQGPKGQRRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQ 946

Query: 209  GIPGRNGMDGIPGKDGLPGK--DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG  G+ G  G  GLPG+   G+ G  G  GE G+ GP G  G+SG+ G PG 
Sbjct: 947  GKPGLQGLPGSTGDRGLPGEPLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGA 1001



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 93/180 (51%), Gaps = 34/180 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM-------GYPGP 171
            G++GE GA+G  G  G  G +GA G  GPPG    PGD+G++G KG+        G PGP
Sbjct: 1169 GERGEPGAEGYKGHVGVPGLRGATGQQGPPGE---PGDQGEQGLKGERGCEKGKKGAPGP 1225

Query: 172  Q---GIPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                GIPG +G  GPKG  GY         PG++G  G+ GL   PG+ G PGR G+ G 
Sbjct: 1226 SGKAGIPGLQGLPGPKGIQGYHGADGILGNPGKVGPPGKQGL---PGIRGSPGRTGLAGA 1282

Query: 220  PGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G+ G  G+PG+ G  G K         G+ G RG+RG  G  G  G P +     E
Sbjct: 1283 PGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQPGE 1342



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 85/173 (49%), Gaps = 25/173 (14%)

Query: 103  CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGPPGPQGIPGD 156
            C   K+  P    GP G+ G  G +G  G KG +G  GA      PG VGPPG QG+PG 
Sbjct: 1215 CEKGKKGAP----GPSGKAGIPGLQGLPGPKGIQGYHGADGILGNPGKVGPPGKQGLPGI 1270

Query: 157  EGKRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGR---------DGL 201
             G  G  G  G PGP       G+PG  G +GPKG+ G PG+ G+ G           G 
Sbjct: 1271 RGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGTRGHRGAQGDQGP 1330

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             GEPGL G PG  G+ G+ G  G PG  G  G  G  G  G  GP G RG +G
Sbjct: 1331 CGEPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGQRGNTG 1383



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 107/246 (43%), Gaps = 70/246 (28%)

Query: 95   PLVAMQGFCNSTKEYC---PPGLQGPIGQKGEIGAKGEMGV------------------- 132
            PL  +QG      E     PPG++G  G +GE GAKGE G                    
Sbjct: 967  PLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGEPGAPGEEGLQGKDGLKGGRGLP 1026

Query: 133  --KGERGEKGAPGVVGP---------PGPQ---GIPGDEGKRGPKGDMGYPGP------Q 172
               GE+G+ G PG++GP         PGP+   GIPG  G+ G KGD G  GP      +
Sbjct: 1027 GEDGEKGDMGLPGIIGPLGRSGQMGLPGPEGIVGIPGQRGRLGKKGDKGQIGPTGEVGSR 1086

Query: 173  GIPGDEGKRGPK------GDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIP 220
            G PG  GK GPK      G +G+ G +G DG  G+P      G+PGL G+PG  G  G P
Sbjct: 1087 GSPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGLSGLPGPKGEKGYP 1146

Query: 221  GKDGL----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G+D                   G+ G PG  G  G  G+ G RG  G+ G  G PG    
Sbjct: 1147 GEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGE 1206

Query: 265  CAYKRE 270
               K E
Sbjct: 1207 QGLKGE 1212



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 85/165 (51%), Gaps = 9/165 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------QGIPGDEGKRGPKGDM 166
            G  G +G  G++G  G+ G+ G RG  G  G+ G PGP       G+PG  G +GPKG+ 
Sbjct: 1248 GADGILGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQ 1307

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G PG  GI G  G RG +GD G  G  GL G+   PGE G+ G+ G  G  G  G +G  
Sbjct: 1308 GLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQ---PGEYGVQGLTGFQGFPGPKGPEGDA 1364

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  GI G  G  G++G TGP G  G  G  G  G      ++ E+
Sbjct: 1365 GIVGISGPKGPIGQRGNTGPLGREGIIGPTGRTGPRGEKGFRGET 1409



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 73/142 (51%), Gaps = 16/142 (11%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q +PG++G +G  G MG PG  G  G
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAVPGEKGDQGLSGLMGPPGMQGDKG 570

Query: 198 RDGLPGEPGL---DGIPGRNG---MDGIPGKDGLPGKDGIPGTNGTN-----GEKGMTGP 246
             G PG PGL    GIPG  G     G PG+ GL G +G PG  G       GE G  GP
Sbjct: 571 LKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGHPGPKGAGFIGSPGEAGQLGP 630

Query: 247 RGN-----RGKSGINGVPGTPA 263
            G      RGK G  G  G P 
Sbjct: 631 EGEGIPGIRGKKGFKGRQGFPG 652



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 74/140 (52%), Gaps = 3/140 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G  G+ G  GA G  GVKG  G  G+PG+ GP G QG+PG  G +G +G  G  G 
Sbjct: 1268 PGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGTRGHRGAQGD 1327

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG  G+ G +G  G+ G     GL G  G PG  G +G  G  G+ G  G  G  G  G 
Sbjct: 1328 QGPCGEPGLKGQPGEYGV---QGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGQRGNTGP 1384

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G  G  G TGPRG +G
Sbjct: 1385 LGREGIIGPTGRTGPRGEKG 1404



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 88/192 (45%), Gaps = 47/192 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKG-- 164
           GL GP G +G+ G KG  G+ G RGE+G PG  G       PG QG+ G EG  GPKG  
Sbjct: 558 GLMGPPGMQGDKGLKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGHPGPKGAG 617

Query: 165 -----------------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRI-------- 193
                                    G+ G QG PGD G RGP G  G PG +        
Sbjct: 618 FIGSPGEAGQLGPEGEGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGF 677

Query: 194 -GLDGRDGLPGEPGLDGIPG-RNGMDGIP------GKDGLPGKDGIPGTNGTNGEKGMTG 245
            GL G  G  G  G  GIPG  +G  G+P      G+ G  G+ G PG  G  G  G+ G
Sbjct: 678 PGLRGSVGPVGPIGPAGIPGPLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPG 737

Query: 246 PRGNRGKSGING 257
           P+G RGK G +G
Sbjct: 738 PQGMRGKPGPSG 749



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 61/110 (55%), Gaps = 3/110 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+QGP G++G  G  G  G +G RG +G  G  G PG +G PG+ G +G  G  G+PGP
Sbjct: 1298 PGIQGPKGEQGLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQPGEYGVQGLTGFQGFPGP 1357

Query: 172  QGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            +G  GD    G  GPKG +G  G  G  GR+G+ G  G  G  G  G  G
Sbjct: 1358 KGPEGDAGIVGISGPKGPIGQRGNTGPLGREGIIGPTGRTGPRGEKGFRG 1407



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 89/209 (42%), Gaps = 40/209 (19%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK------------------GA 141
           QG      E   PG +G +G  G  G +G+ G  G+ G+                   G 
Sbjct: 715 QGTAGELGEPGYPGDKGAVGLPGPQGMRGKPGPSGQTGDPGLQGPSGPPGPEGFPGDIGI 774

Query: 142 PGVVGPPGPQGIPGD------------EGKRGPKGDMGYPGP--------QGIPGDEGKR 181
           PG  GP GP+G+ G+            +G+ GP G  G  GP         G PG EG +
Sbjct: 775 PGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPGKPGQKGYAGEPGPEGLK 834

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G  GD G  G+IG  G  GLPGE G  G  G  G  G PG  G  G+ G+ G  G  G  
Sbjct: 835 GEVGDQGNIGKIGETGPVGLPGEVGTTGSIGEKGERGSPGPLGPQGEKGVMGHVGARGPP 894

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  GP+G R   G +G+ G   I   K E
Sbjct: 895 GSQGPKGQR--RGPDGLLGEQGIQGAKGE 921



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 89/209 (42%), Gaps = 58/209 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------GPPGPQGI 153
           PG++G  G KG  G  G+ G +G  G  G+PG+V                  GP GP GI
Sbjct: 636 PGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGI 695

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG        G+ G PG   I GD+G++G  G++G PG  G  G  GLPG  G+ G PG 
Sbjct: 696 PGPL-----SGNKGLPG---IKGDKGEQGTAGELGEPGYPGDKGAVGLPGPQGMRGKPGP 747

Query: 214 NGMD---------------------GIPGKDGLPGKDGIPGT---------NGTNGEKGM 243
           +G                       GIPG++G  G  G+ G           GT GE+G 
Sbjct: 748 SGQTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGP 807

Query: 244 TGPRG--NRGKSGINGVPGTPAICAYKRE 270
            GP G    GK G  G  G P     K E
Sbjct: 808 IGPFGELGPGKPGQKGYAGEPGPEGLKGE 836



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 95/231 (41%), Gaps = 54/231 (23%)

Query: 99  MQGFCNSTKEYCPPGLQGPI-GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
           ++G         P G+ GP+ G KG  G KG+ G +G  GE G PG  G  G  G+PG +
Sbjct: 680 LRGSVGPVGPIGPAGIPGPLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPQ 739

Query: 158 GKRGPKGDMGYPGPQ------------------GIPGDEGKRGPKGDMG----------- 188
           G RG  G  G  G                    GIPG  G  GPKG +G           
Sbjct: 740 GMRGKPGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLK 799

Query: 189 ----YPGRI--------GLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDG 230
                 G I        G  G+ G  GEPG +G+ G  G  G  GK       GLPG+ G
Sbjct: 800 GTQGEEGPIGPFGELGPGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVG 859

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGI------NGVPGTPAICAYKRESCSLL 275
             G+ G  GE+G  GP G +G+ G+       G PG+      +R    LL
Sbjct: 860 TTGSIGEKGERGSPGPLGPQGEKGVMGHVGARGPPGSQGPKGQRRGPDGLL 910


>gi|397668318|ref|YP_006509855.1| hypothetical protein LPV_2986 [Legionella pneumophila subsp.
           pneumophila]
 gi|395131729|emb|CCD10022.1| conserved exported protein of unknown function containing Collagen
           helix repeat [Legionella pneumophila subsp. pneumophila]
          Length = 460

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 104/200 (52%), Gaps = 22/200 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G KGE G +G  G KG+RGE G+ G+ GP G QG  G +G  GPKGD G
Sbjct: 118 EAGPQGLPGPKGDKGETGPQGLPGPKGDRGEAGSQGLPGPKGDQGEAGPQGLPGPKGDQG 177

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 178 EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRG 237

Query: 219 IPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPAICA 266
             G  GLP         G  G+PG  G  GE   +G+ GP+G++G++G  G  G P    
Sbjct: 238 EAGPQGLPGPKGDRGEAGPQGVPGPKGDRGEAGPQGLPGPKGDKGETGAVGPQGMPGPKG 297

Query: 267 YKRESCSLLP-NSETSQLLI 285
              +    +P   ET Q+L 
Sbjct: 298 EAGDDGQGVPAGGETGQVLA 317



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 96/174 (55%), Gaps = 21/174 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG++GE G  G+ GP G QG  G +G  GPKGD G
Sbjct: 73  EAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDKG 132

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 133 ETGPQGLPGPKGDRGEAGSQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRG 192

Query: 219 IPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
             G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 193 EAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPG 246



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/162 (46%), Positives = 92/162 (56%), Gaps = 12/162 (7%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG++GE G  G+ GP G +G  G +G  GPKGD G
Sbjct: 103 EAGPQGLPGPKGDQGEAGPQGLPGPKGDKGETGPQGLPGPKGDRGEAGSQGLPGPKGDQG 162

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G +         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 163 EAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQG 222

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  GLPG     G  G  G +G+ GP+G+RG++G  GVPG
Sbjct: 223 EAGPQGLPGPK---GDRGEAGPQGLPGPKGDRGEAGPQGVPG 261



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 92/169 (54%), Gaps = 21/169 (12%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            P G QGP G KGE G KG+ G          KG++GE G  G+ GP G QG  G +G  
Sbjct: 51  IPSGPQGPKGDKGEAGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLP 110

Query: 161 GPKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           GPKGD G  GPQG+PG +G +         GPKGD G  G  GL G  G  GE G  G+P
Sbjct: 111 GPKGDQGEAGPQGLPGPKGDKGETGPQGLPGPKGDRGEAGSQGLPGPKGDQGEAGPQGLP 170

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  GLPG     G  G  G +G+ GP+G+RG++G  G+PG
Sbjct: 171 GPKGDQGEAGPQGLPGPK---GDRGEAGPQGLPGPKGDRGEAGPQGLPG 216


>gi|5803080|ref|NP_006761.1| macrophage receptor MARCO [Homo sapiens]
 gi|17380151|sp|Q9UEW3.1|MARCO_HUMAN RecName: Full=Macrophage receptor MARCO; AltName: Full=Macrophage
           receptor with collagenous structure; AltName:
           Full=Scavenger receptor class A member 2
 gi|3002791|gb|AAC08800.1| macrophage receptor MARCO [Homo sapiens]
 gi|16359079|gb|AAH16004.1| Macrophage receptor with collagenous structure [Homo sapiens]
 gi|62630130|gb|AAX88875.1| unknown [Homo sapiens]
 gi|119615613|gb|EAW95207.1| macrophage receptor with collagenous structure [Homo sapiens]
 gi|123986035|gb|ABM83749.1| macrophage receptor with collagenous structure [synthetic
           construct]
 gi|123986268|gb|ABM83759.1| macrophage receptor with collagenous structure [synthetic
           construct]
 gi|123998982|gb|ABM87079.1| macrophage receptor with collagenous structure [synthetic
           construct]
 gi|189053706|dbj|BAG35958.1| unnamed protein product [Homo sapiens]
 gi|307685259|dbj|BAJ20560.1| macrophage receptor with collagenous structure [synthetic
           construct]
          Length = 520

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/170 (46%), Positives = 95/170 (55%), Gaps = 18/170 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +GE+G KG  G++GP G  G         +PG +G RG K
Sbjct: 205 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMK 264

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNG-- 215
           GD   MG PG QG  GD G+ GP G  G+PG  G  G+ GL   PG PG  G PG  G  
Sbjct: 265 GDAGVMGPPGAQGSKGDFGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 324

Query: 216 -MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G PG+ GLPG  G PG  G  G KG TG +G +G+ G +GVPG   +
Sbjct: 325 GSAGSPGRAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGV 374



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 102/193 (52%), Gaps = 21/193 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD G+ GP       
Sbjct: 235 GLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQGSKGDFGRPGPPGLAGFP 294

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD 217
             KGD G PG QG+PG  G  G  G  G PG  G  GR GL   PG PG  G+ G  G  
Sbjct: 295 GAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGSKGDT 354

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPR---GNRGKSGINGVPGTPAICAYKRES 271
           G+ G+ G  G+ G+PG  G  GE+   G+ GP+   G  G+ G  GV G+      K E 
Sbjct: 355 GLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPGQAGQKGDQGVKGSSGEQGVKGEK 414

Query: 272 CSLLPNSETSQLL 284
                NS + +++
Sbjct: 415 GERGENSVSVRIV 427



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 86/176 (48%), Gaps = 33/176 (18%)

Query: 123 EIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E GAKG MG               VKGE G +G  G  G  G  G PG +G++G KGD G
Sbjct: 176 EKGAKGAMGRDGATGPSGPQGPPGVKGEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGG 235

Query: 168 YPGPQ------------GIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPG 212
             GP+            G+PG +G RG KGD   MG PG  G  G  G PG PGL G PG
Sbjct: 236 LIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQGSKGDFGRPGPPGLAGFPG 295

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G PG  G+PG    PG  G  G KG  G  G+ G++G+ G PG+P     K
Sbjct: 296 AKGDQGQPGLQGVPGP---PGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLK 348



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G  G  G  G +G++G PG+ G PGP G  G  G +G  G  G PG
Sbjct: 272 PPGAQGSKGDFGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPG 331

Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G+PG  G       +G KGD G  G+ G  G  G+PG  G+ G  G  G+ G  G  G
Sbjct: 332 RAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPG 391

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G+ G  G  G++GE+G+ G +G RG++ ++
Sbjct: 392 QAGQKGDQGVKGSSGEQGVKGEKGERGENSVS 423



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 52/132 (39%), Gaps = 33/132 (25%)

Query: 170 GPQGIPGDEG------------------KRGPKGDMG---------------YPGRIGLD 196
           G QG PG +G                  ++G KG MG                 G  GL 
Sbjct: 148 GEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAMGRDGATGPSGPQGPPGVKGEAGLQ 207

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G PG+ G  G PG  G  G  G  GL G  G  GT G  G+ G+ G +G+RG  G  
Sbjct: 208 GPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDA 267

Query: 257 GVPGTPAICAYK 268
           GV G P     K
Sbjct: 268 GVMGPPGAQGSK 279


>gi|149732296|ref|XP_001503293.1| PREDICTED: collagen alpha-1(XXI) chain [Equus caballus]
          Length = 957

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/152 (46%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG +GQKGEIG  G +G KG  G  G  G +G PG  G PG +G +G  G  G PG 
Sbjct: 610 PGNQGLMGQKGEIGPPGPVGKKGAPGIPGLMGSIGSPGQPGTPGSKGSKGEPGPQGIPGA 669

Query: 172 QGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G+ GD+G  GP G+ GY   PG  G  G  G  GE G+ G  G NG  GIPG+ G+PG 
Sbjct: 670 SGLKGDQGAVGPPGEPGYLGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQQGIPGH 729

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  GE G+ G  G +G+SG++G+ G
Sbjct: 730 HGAKGERGDKGEPGVRGAIGPKGESGLDGLMG 761



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 92/174 (52%), Gaps = 15/174 (8%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKG---------EIGAKGEMGVKGERGEKGAPGVVGPPGP 150
           QG      E  PPG   P+G+KG          IG+ G+ G  G +G KG PG  G PG 
Sbjct: 613 QGLMGQKGEIGPPG---PVGKKGAPGIPGLMGSIGSPGQPGTPGSKGSKGEPGPQGIPGA 669

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+ GD+G  GP G+ GY G  GI G +G +G +G+ G  G+ G +GR G+PG+    GI
Sbjct: 670 SGLKGDQGAVGPPGEPGYLGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQ---QGI 726

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PG +G  G  G  G PG  G  G  G +G  G+ GP G +G+ G  G  G P +
Sbjct: 727 PGHHGAKGERGDKGEPGVRGAIGPKGESGLDGLMGPAGPQGQPGETGPQGPPGL 780



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 87/174 (50%), Gaps = 15/174 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGD 165
           PGL G  G+ G  G  G MG  G +GE G PG        G PG  G PG++G  G KG+
Sbjct: 562 PGLPGRAGEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGSRGEPGIPGFPGNQGLMGQKGE 621

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD-------- 217
           +G PGP G  G  G  G  G +G PG+ G  G  G  GEPG  GIPG +G+         
Sbjct: 622 IGPPGPVGKKGAPGIPGLMGSIGSPGQPGTPGSKGSKGEPGPQGIPGASGLKGDQGAVGP 681

Query: 218 -GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G PG  GLPG  G  G  G  GEKG+ G +G  G+ GI G  G P     K E
Sbjct: 682 PGEPGYLGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQQGIPGHHGAKGE 735



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 93/193 (48%), Gaps = 42/193 (21%)

Query: 110 CPPG---LQGPIG------------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
           CPPG   LQGP G            Q G+ G  G  G+ G  G  G+PG+ G  GP+G  
Sbjct: 446 CPPGKPGLQGPKGDPGQPGNPGYRGQPGQDGKPGYQGIAGSPGVPGSPGIQGARGPEGYK 505

Query: 155 GDEGKRGPKGDM---GYPGPQGIPGDEGKRGPKGDMGYPGRI---------------GLD 196
           G+ G+ G KGD    G+PG  G+PG +G+ GPKG+ G PG                 GL 
Sbjct: 506 GEPGRDGEKGDRGLPGFPGLDGMPGSKGEMGPKGEKGSPGFYGKKGAKGEKGIAGFPGLP 565

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---------GIPGTNGTNGEKGMTGPR 247
           GR G PG  G DG+ G  G  G  G  G PG+D         G PG  G  G+KG  GP 
Sbjct: 566 GRAGEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGSRGEPGIPGFPGNQGLMGQKGEIGPP 625

Query: 248 GNRGKSGINGVPG 260
           G  GK G  G+PG
Sbjct: 626 GPVGKKGAPGIPG 638



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 79/161 (49%), Gaps = 27/161 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G +G KG PG  G PG +G PG +GK G +G  G PG  G PG +G RGP+G  G P
Sbjct: 449 GKPGLQGPKGDPGQPGNPGYRGQPGQDGKPGYQGIAGSPGVPGSPGIQGARGPEGYKGEP 508

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRN---------------------------GMDGIPGKD 223
           GR G  G  GLPG PGLDG+PG                             G  G+PG+ 
Sbjct: 509 GRDGEKGDRGLPGFPGLDGMPGSKGEMGPKGEKGSPGFYGKKGAKGEKGIAGFPGLPGRA 568

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG+ G  G  G+ G KG  GP G  G+ G  G PG P  
Sbjct: 569 GEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGSRGEPGIPGF 609



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 84/173 (48%), Gaps = 24/173 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV------------------------KGERGEKGAPGVVGP 147
           PGL G  G KGE+G KGE G                          GE G  G  G++G 
Sbjct: 523 PGLDGMPGSKGEMGPKGEKGSPGFYGKKGAKGEKGIAGFPGLPGRAGEPGRHGKDGLMGS 582

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG +G  G  G  G  G  G PG  G PG++G  G KG++G PG +G  G  G+PG  G 
Sbjct: 583 PGYKGEAGPPGAPGQDGSRGEPGIPGFPGNQGLMGQKGEIGPPGPVGKKGAPGIPGLMGS 642

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG+ G  G  G  G PG  GIPG +G  G++G  GP G  G  G+ G+ G
Sbjct: 643 IGSPGQPGTPGSKGSKGEPGPQGIPGASGLKGDQGAVGPPGEPGYLGLPGIQG 695



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 100/217 (46%), Gaps = 36/217 (16%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   S      PG+QG    +G  G KGE G  GE+G++G PG    PG  G+PG +G+
Sbjct: 481 QGIAGSPGVPGSPGIQG---ARGPEGYKGEPGRDGEKGDRGLPGF---PGLDGMPGSKGE 534

Query: 160 RGPKGD------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRI------GL 195
            GPKG+                   G+PG  G  G+ G+ G  G MG PG        G 
Sbjct: 535 MGPKGEKGSPGFYGKKGAKGEKGIAGFPGLPGRAGEPGRHGKDGLMGSPGYKGEAGPPGA 594

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP------GKDGIPGTNGTNGEKGMTGPRGN 249
            G+DG  GEPG+ G PG  G+ G  G+ G P      G  GIPG  G+ G  G  G  G+
Sbjct: 595 PGQDGSRGEPGIPGFPGNQGLMGQKGEIGPPGPVGKKGAPGIPGLMGSIGSPGQPGTPGS 654

Query: 250 RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           +G  G  G  G P     K +  ++ P  E   L +P
Sbjct: 655 KGSKGEPGPQGIPGASGLKGDQGAVGPPGEPGYLGLP 691



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 96/198 (48%), Gaps = 24/198 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------VGPPGPQG---IPGDEGK 159
           PGL G IG  G+ G  G  G KGE G +G PG          VGPPG  G   +PG +GK
Sbjct: 637 PGLMGSIGSPGQPGTPGSKGSKGEPGPQGIPGASGLKGDQGAVGPPGEPGYLGLPGIQGK 696

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G KG+ G  G QG  G+ G++G  G  G PG  G  G  G  GEPG+ G  G  G  G+
Sbjct: 697 KGDKGNQGEKGIQGQKGENGRQGIPGQQGIPGHHGAKGERGDKGEPGVRGAIGPKGESGL 756

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
                    DG+ G  G  G+ G TGP   +G  G++G PG      + R+ C+ +  ++
Sbjct: 757 ---------DGLMGPAGPQGQPGETGP---QGPPGLDGKPGREFSEQFIRQVCTDVLRAQ 804

Query: 280 TSQLLIPPTIVGSEHIFS 297
              LL    I   +H  S
Sbjct: 805 LPVLLQSGRIQNCDHCQS 822



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 50/99 (50%), Gaps = 3/99 (3%)

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G +GPKGD G PG  G  G+ G  G+PG  GI    G  G+PG  G+ G  G  G 
Sbjct: 448 PGKPGLQGPKGDPGQPGNPGYRGQPGQDGKPGYQGI---AGSPGVPGSPGIQGARGPEGY 504

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
            G  G  G  G RG  G  G++G+PG+      K E  S
Sbjct: 505 KGEPGRDGEKGDRGLPGFPGLDGMPGSKGEMGPKGEKGS 543


>gi|54298633|ref|YP_125002.1| hypothetical protein lpp2697 [Legionella pneumophila str. Paris]
 gi|53752418|emb|CAH13850.1| hypothetical protein lpp2697 [Legionella pneumophila str. Paris]
          Length = 382

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/150 (48%), Positives = 88/150 (58%), Gaps = 6/150 (4%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P GL GP G +GE G +G  G KG++GE G  G+ GP G QG  G +G  GPKGD G  G
Sbjct: 55  PQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAG 114

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           PQG+PG      PKGD G  G  GL G  G  GE G  G+PG  G  G  G  GLPG  G
Sbjct: 115 PQGLPG------PKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKG 168

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G +GM GP+G++G++G  G+PG
Sbjct: 169 DKGETGAVGPQGMPGPKGDQGEAGPQGLPG 198



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 94/178 (52%), Gaps = 7/178 (3%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG++GE G  G+ GP G +G  G +G  GPKGD G
Sbjct: 67  EAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQG 126

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             GPQG+P      GPKGD G  G  GL G  G  GE G  G+PG  G  G  G  G  G
Sbjct: 127 EAGPQGLP------GPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDKGETGAVGPQG 180

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP-NSETSQLL 284
             G  G  G  G +G+ GP+G++G++G  G  G P       +    +P   ET Q+L
Sbjct: 181 MPGPKGDQGEAGPQGLPGPKGDKGETGAVGPQGMPGPKGEAGDDGQGVPAGGETGQIL 238



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 68/120 (56%), Gaps = 12/120 (10%)

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDG 200
           P GPQG+PG +G RG  G  G PGP+G   D+G+       GPKGD G  G  GL G  G
Sbjct: 52  PSGPQGLPGPKGDRGEAGPQGLPGPKG---DQGEAGPQGLPGPKGDQGEAGPQGLPGPKG 108

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             GE G  G+PG  G  G  G  GLPG     G  G  G +G+ GP+G+RG++G  G+PG
Sbjct: 109 DRGEAGPQGLPGPKGDQGEAGPQGLPGPK---GDRGEAGPQGLPGPKGDRGEAGPQGLPG 165


>gi|20178621|gb|AAL50184.1| collagen-like protein 2 [Streptococcus pyogenes]
          Length = 444

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/183 (44%), Positives = 99/183 (54%), Gaps = 21/183 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG---------EIGAKGE---MGVKGERGEKGAPG 143
           L    G   +  E  P G QGP G++G         E GA+G    MG  GERGEKG PG
Sbjct: 169 LAGKAGEAGAKGETGPAGPQGPRGEQGPQGLPGKDGEAGAQGPAGPMGPAGERGEKGEPG 228

Query: 144 VVGPPGPQGIPGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                  QG  GD G+ GP   +G+ G  GP G  G+ G  GP G  G  G+ GL G+DG
Sbjct: 229 T------QGAKGDRGETGPVGPRGERGEAGPAGKDGERGPVGPAGKDGQNGQDGLPGKDG 282

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G DG+PG++G DG  GKDGLPGKDG  G +G +G  G  G  G  GK G +G PG
Sbjct: 283 KDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGLPGKDGKDGQPG 342

Query: 261 TPA 263
            PA
Sbjct: 343 KPA 345



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 87/154 (56%), Gaps = 9/154 (5%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGI 153
           QG      E    G  GP+G  GE G KGE G +G +G++G  G VGP       GP G 
Sbjct: 197 QGLPGKDGEAGAQGPAGPMGPAGERGEKGEPGTQGAKGDRGETGPVGPRGERGEAGPAGK 256

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G+ G  GP G  G  G  G+PG +GK G  G  G PG+ G DG++G  G PG DG  G+
Sbjct: 257 DGERGPVGPAGKDGQNGQDGLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQ 316

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           +G DG+PGKD   GKDG+PG +G +G+ G   P+
Sbjct: 317 DGKDGLPGKD---GKDGLPGKDGKDGQPGKPAPK 347



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 6/142 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G++G  G  G  G++GERGE+G  G+ G  G  G  G+ G  GP+G  G  GPQG+PG +
Sbjct: 144 GEQGPTGPAGPRGLQGERGEQGPTGLAGKAGEAGAKGETGPAGPQGPRGEQGPQGLPGKD 203

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G+ G +G  G    +G  G  G  GEPG  G  G  G  G  G  G   + G  G  G +
Sbjct: 204 GEAGAQGPAGP---MGPAGERGEKGEPGTQGAKGDRGETGPVGPRG---ERGEAGPAGKD 257

Query: 239 GEKGMTGPRGNRGKSGINGVPG 260
           GE+G  GP G  G++G +G+PG
Sbjct: 258 GERGPVGPAGKDGQNGQDGLPG 279



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 73/156 (46%), Gaps = 12/156 (7%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G+ G  GERGE+G  G  GP GP+G+ G +G +G +G+            +G  GP G  
Sbjct: 108 GQDGRNGERGEQGPTGPTGPAGPRGLQGLQGLQGERGE------------QGPTGPAGPR 155

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  G  G  G  GL G+ G  G  G  G  G  G  G  G  G+PG +G  G +G  GP 
Sbjct: 156 GLQGERGEQGPTGLAGKAGEAGAKGETGPAGPQGPRGEQGPQGLPGKDGEAGAQGPAGPM 215

Query: 248 GNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
           G  G+ G  G PGT      + E+  + P  E  + 
Sbjct: 216 GPAGERGEKGEPGTQGAKGDRGETGPVGPRGERGEA 251


>gi|332221809|ref|XP_003260057.1| PREDICTED: collagen alpha-1(XXIV) chain [Nomascus leucogenys]
          Length = 1709

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 96/167 (57%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG   P G  GIPG 
Sbjct: 1225 VGVPGLRGATGQQGPPGEPG---DQGERGLKGERGSEGNKGKKGAPG---PSGKPGIPGL 1278

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G  GPKG  GY G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+
Sbjct: 1279 QGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGL 1338

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G PG  G  G+ G+PG +G  G++G  G +G++G  G  G+ G P 
Sbjct: 1339 PGSPGIQGPKGEQGLPGQSGIQGKRGHRGAQGDQGPCGEPGLKGQPG 1385



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 99/177 (55%), Gaps = 9/177 (5%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+  QG   +  E    G +GP G  GE G  GE GV+G+ G +G PG  G    +G+PG
Sbjct: 929  LLGEQGIQGAKGEKGDQGKRGPHGLIGETGNPGERGVQGKPGLQGLPGSTGD---RGLPG 985

Query: 156  DEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            + G RG +GD+G PG    +G PG EG+ G +G+ G  G +G  G  G  GEPGL G PG
Sbjct: 986  EPGLRGLQGDVGPPGEMGTEGPPGIEGESGLQGEPGAKGDVGPAGSVGGTGEPGLRGEPG 1045

Query: 213  RNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
              G +G+ GKDGL   PG  G+PG +G  GE G  G  G  G+SG  G+PG   I  
Sbjct: 1046 APGEEGLQGKDGLKGVPGGKGLPGEDGEKGEMGSPGIIGPLGRSGQMGLPGPEGIAG 1102



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 94/175 (53%), Gaps = 15/175 (8%)

Query: 96   LVAMQGFCNSTKEYC---PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L  +QG      E     PPG++G  G +GE GAKG++G  G  G  G PG+ G PG   
Sbjct: 989  LRGLQGDVGPPGEMGTEGPPGIEGESGLQGEPGAKGDVGPAGSVGGTGEPGLRGEPG--- 1045

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
             PG+EG +G  G  G PG +G+PG++G+   KG+MG PG IG  GR       G  G+PG
Sbjct: 1046 APGEEGLQGKDGLKGVPGGKGLPGEDGE---KGEMGSPGIIGPLGRS------GQMGLPG 1096

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
              G+ GIPG+ G PG+ G  G  G  GE G  GP G  GKSG  G  G      +
Sbjct: 1097 PEGIAGIPGQRGRPGRKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGARGAVGH 1151



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 90/170 (52%), Gaps = 21/170 (12%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +GV G RG   ++G PG  G  G +G+ G+ G  G KG  G PGP
Sbjct: 1210 QGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGERGLKGERGSEGNKGKKGAPGP 1269

Query: 172  QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G   IPG +G  GPKG  GY         PG+IG  G+ GL   PG+ G PGR G+ G 
Sbjct: 1270 SGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGL---PGIRGSPGRTGLAGA 1326

Query: 220  PGKDGLPGKDGIPGT---NGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            PG  G+ G  G+PG+    G  GE+G+ G  G +GK G  G  G    C 
Sbjct: 1327 PGPPGVKGSSGLPGSPGIQGPKGEQGLPGQSGIQGKRGHRGAQGDQGPCG 1376



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 96/198 (48%), Gaps = 34/198 (17%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKG----------------------EIGAKGEMGVKGE 135
             + G+     +  P GL GP G+KG                      E G +GE G +G 
Sbjct: 1162 GIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGY 1221

Query: 136  RGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            +G  G PG+    G  GP G PGD+G+RG KG+ G          EG +G KG  G  G+
Sbjct: 1222 KGHVGVPGLRGATGQQGPPGEPGDQGERGLKGERG---------SEGNKGKKGAPGPSGK 1272

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G+ G  GL G  G+ G  G +G+ G PGK G PGK G+PG  G+ G  G+ G  G  G 
Sbjct: 1273 PGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGSPGRTGLAGAPGPPGV 1332

Query: 253  SGINGVPGTPAICAYKRE 270
             G +G+PG+P I   K E
Sbjct: 1333 KGSSGLPGSPGIQGPKGE 1350



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 98/212 (46%), Gaps = 45/212 (21%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGA------------ 141
            V  QG      E  P GL G +G  G IG KGE G  G    +GEKG             
Sbjct: 837  VGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVTGYPGPPGVPGP 896

Query: 142  ------PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKG---D 186
                  PG VG  GP G  G +G+RGP+G  G  G QGI       GD+GKRGP G   +
Sbjct: 897  IGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGE 956

Query: 187  MGYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
             G PG  G+ G+             GLPGEPGL G+ G  G  G  G +G PG +G  G 
Sbjct: 957  TGNPGERGVQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGTEGPPGIEGESGL 1016

Query: 235  NGTNGEKGMTGPRGN---RGKSGINGVPGTPA 263
             G  G KG  GP G+    G+ G+ G PG P 
Sbjct: 1017 QGEPGAKGDVGPAGSVGGTGEPGLRGEPGAPG 1048



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 89/188 (47%), Gaps = 36/188 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGDM 166
           GL GP G +G+ G KG  G+ G RGE+G PG  G       PG QG+ G EG  GPKG  
Sbjct: 553 GLMGPPGMQGDKGLKGHPGLPGLRGEQGIPGFAGNIGSLGYPGRQGLAGPEGNPGPKGAR 612

Query: 167 GY------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------- 207
           G+             G +GIPG  GK+G KG  G+PG  G  G  GL G PGL       
Sbjct: 613 GFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPP 672

Query: 208 --------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGIN 256
                    G  G  G  GIPG  GL G  G+PG  G  GE+G  G  G     G  G  
Sbjct: 673 GFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGMKGDKGEQGTAGELGEPGYPGDKGAV 732

Query: 257 GVPGTPAI 264
           G+PG P +
Sbjct: 733 GLPGPPGM 740



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 95/196 (48%), Gaps = 42/196 (21%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGE------------MGVKGERGEKGAPGVVGPPGPQGI-- 153
            E  P GL+G +G +G IG  GE             G  GE+GE+G+PG +GP G +G+  
Sbjct: 827  EPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVTG 886

Query: 154  ----------------PGDEGKR------GPKGDMGYPGPQGIPGD---EGKRGPKGDMG 188
                            PG  G R      GPKG  G  GP G+ G+   +G +G KGD G
Sbjct: 887  YPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQG 946

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTG 245
              G  GL G  G PGE G+ G PG  G+ G  G  GLPG+ G+ G     G  GE G  G
Sbjct: 947  KRGPHGLIGETGNPGERGVQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGTEG 1006

Query: 246  PRGNRGKSGINGVPGT 261
            P G  G+SG+ G PG 
Sbjct: 1007 PPGIEGESGLQGEPGA 1022



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 93/181 (51%), Gaps = 3/181 (1%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
             +QG   +  +  P G  G  G+   +GE GA GE G++G+ G KG PG  G PG  G  
Sbjct: 1015 GLQGEPGAKGDVGPAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGKGLPGEDGEK 1074

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G+ G  G  G +G  G  G+PG EG  G  G  G PGR G  G+ G  GE G  G PG+ 
Sbjct: 1075 GEMGSPGIIGPLGRSGQMGLPGPEGIAGIPGQRGRPGRKGDKGQIGPTGEVGSRGPPGKI 1134

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            G  G  G  G  G  G  G  G +GE G+ G RG++G+ G +G+PG      Y  E  ++
Sbjct: 1135 GKSGPKGARGARGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTV 1194

Query: 275  L 275
            L
Sbjct: 1195 L 1195



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 83/149 (55%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G      V G++G++G  G++GPPG QG   D+G +G  G  G  G 
Sbjct: 522 PGLPGPKGPKGDPGFSPGQAVPGQKGDQGLSGLMGPPGMQG---DKGLKGHPGLPGLRGE 578

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QGIPG  G     G +GYPGR GL G +G PG  G  G  G  G  G  G +G  G  GI
Sbjct: 579 QGIPGFAGN---IGSLGYPGRQGLAGPEGNPGPKGARGFIGSPGEAGQLGPEGERGIPGI 635

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G +G  G  G+RG +G++G PG
Sbjct: 636 RGKKGFKGRQGFPGDFGDRGPAGLDGSPG 664



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/167 (41%), Positives = 81/167 (48%), Gaps = 21/167 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
           PG  G IG  G  G +G  G +G  G KGA G +G PG  G  G EG+R   G +G  G+
Sbjct: 582 PGFAGNIGSLGYPGRQGLAGPEGNPGPKGARGFIGSPGEAGQLGPEGERGIPGIRGKKGF 641

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGI 210
            G QG PGD G RGP G  G PG                   +G  G  G+PG  GL G 
Sbjct: 642 KGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGN 701

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  GM G  G+ G  G+ G PG  G  G  G+ GP G RGK G +G
Sbjct: 702 KGLPGMKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSG 748



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 91/184 (49%), Gaps = 39/184 (21%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IG  GE+G +G+ G+KG     G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 797 LKGTQGEEGPIGPFGELGPRGKPGQKG---YAGEPGPEGLKGEVGDQGNIGKIGETGPVG 853

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
           +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 854 LPGEVGMTGSIGEKGERGSPGPLGPQGEKGVTGYPGPPGVPGPIGPLGLPGHVGARGPPG 913

Query: 213 RN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGING 257
                G  G  G DGL G+ GI G  G  G++G  GP            RG +GK G+ G
Sbjct: 914 SQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGETGNPGERGVQGKPGLQG 973

Query: 258 VPGT 261
           +PG+
Sbjct: 974 LPGS 977



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 70/132 (53%), Gaps = 12/132 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q +PG +G +G  G MG PG  G  G
Sbjct: 506 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAVPGQKGDQGLSGLMGPPGMQGDKG 565

Query: 198 RDGLPGEPGL---DGIPGRNG---MDGIPGKDGLPGKDGIPGTNGTN------GEKGMTG 245
             G PG PGL    GIPG  G     G PG+ GL G +G PG  G        GE G  G
Sbjct: 566 LKGHPGLPGLRGEQGIPGFAGNIGSLGYPGRQGLAGPEGNPGPKGARGFIGSPGEAGQLG 625

Query: 246 PRGNRGKSGING 257
           P G RG  GI G
Sbjct: 626 PEGERGIPGIRG 637



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 96/235 (40%), Gaps = 75/235 (31%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMG 167
           P G  GP G +G IG+ GE G  G  GE+G PG+ G  G    QG PGD G RGP G  G
Sbjct: 602 PEGNPGPKGARGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDG 661

Query: 168 YPG------------------------PQGIPG---------------DEGKRGPKGDMG 188
            PG                        P GIPG               D+G++G  G++G
Sbjct: 662 SPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGMKGDKGEQGTAGELG 721

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMD---------------------GIPGKDGLPG 227
            PG  G  G  GLPG PG+ G PG +G                       GIPG++G  G
Sbjct: 722 EPGYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEG 781

Query: 228 KDGIPGT---------NGTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRE 270
             G+ G           GT GE+G  GP G    RGK G  G  G P     K E
Sbjct: 782 PKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGEPGPEGLKGE 836



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 84/183 (45%), Gaps = 39/183 (21%)

Query: 112  PGLQGPIGQKG---------------EIGAKGEMGVKGERGEKGAPGVVGPPGP------ 150
            PGLQG +G KG               +IG  G+ G+ G RG  G  G+ G PGP      
Sbjct: 1276 PGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGS 1335

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G+PG  G +GPKG+ G PG  GI G  G RG +GD G  G  GL G+   PGE G+ G+
Sbjct: 1336 SGLPGSPGIQGPKGEQGLPGQSGIQGKRGHRGAQGDQGPCGEPGLKGQ---PGEYGVQGL 1392

Query: 211  PGRN---------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G                 G+ G  G  G  G  G  G  G  G  G TGPRG +G  G 
Sbjct: 1393 TGFQGFPGPKGPGGDAGIVGISGPKGPVGHRGNTGPLGREGIIGPTGRTGPRGEKGFRGE 1452

Query: 256  NGV 258
             G+
Sbjct: 1453 TGL 1455



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 66/133 (49%), Gaps = 21/133 (15%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPG 212
           KRGP+G  G  G  G+PG  G +GPKGD G+      PG+ G  G  GL G PG+ G   
Sbjct: 506 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAVPGQKGDQGLSGLMGPPGMQG--- 562

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGT------NGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             G+ G PG  GL G+ GIPG  G        G +G+ GP GN G  G  G  G+P    
Sbjct: 563 DKGLKGHPGLPGLRGEQGIPGFAGNIGSLGYPGRQGLAGPEGNPGPKGARGFIGSPG--- 619

Query: 267 YKRESCSLLPNSE 279
              E+  L P  E
Sbjct: 620 ---EAGQLGPEGE 629



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 84/180 (46%), Gaps = 33/180 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G KG +G +G  G   +KG +GE+G  G  G  GP+G PG       KG  G 
Sbjct: 774 PGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQ------KGYAGE 827

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP+G+      +G  GD G  G+IG  G  GLPGE G+ G  G  G  G PG  G  G+
Sbjct: 828 PGPEGL------KGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGE 881

Query: 229 DGI------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+                  PG  G  G  G  GP+G RG  G +G+ G   I   K E
Sbjct: 882 KGVTGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGE 941



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 85/182 (46%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
           GL G  G KGE G  GE+G  G  G+KGA G+ GPPG +G PG  G+ G           
Sbjct: 703 GLPGMKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGPSGPP 762

Query: 162 ----PKGDMGYPGPQGIPGDEGKRGP---------KGDMGYPGRI---------GLDGRD 199
                 GD+G PG  G  G +G  G          KG  G  G I         G  G+ 
Sbjct: 763 GPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQK 822

Query: 200 GLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  GEPG +G+ G  G  G  GK       GLPG+ G+ G+ G  GE+G  GP G +G+ 
Sbjct: 823 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEK 882

Query: 254 GI 255
           G+
Sbjct: 883 GV 884


>gi|395839652|ref|XP_003792698.1| PREDICTED: macrophage receptor MARCO [Otolemur garnettii]
          Length = 558

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 98/198 (49%), Gaps = 39/198 (19%)

Query: 112 PGLQGPIGQKGE------IGAKGEMGVKGERGEKGAPG------------VVGPPGPQGI 153
           PG  GP G+KG       IG KG  G+KG++G+ G PG            V+GPPG QG 
Sbjct: 257 PGTPGPQGEKGSKGDGGLIGPKGAPGIKGDKGDLGLPGNKGDVGMKGDRGVMGPPGAQGS 316

Query: 154 PGDEGKRGP---------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG- 203
            GD GK GP         KGD G PG QG+PG  G  GP G  G PG  GL G  GLPG 
Sbjct: 317 KGDSGKPGPPGLLGSPGVKGDQGQPGAQGVPGLPGASGPPGAKGEPGSTGLRGLTGLPGI 376

Query: 204 --EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRGNRGK 252
              PG+ G+ G  G  G  G+ G  G+ G+PG  GT GE+G           GP G +G 
Sbjct: 377 PGSPGVSGMKGDKGNPGFQGQKGTKGEPGVPGLAGTKGERGQPGLAGPMGAPGPAGQKGN 436

Query: 253 SGINGVPGTPAICAYKRE 270
            G+ G PG   +   K E
Sbjct: 437 PGLKGSPGLQGVKGEKGE 454



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/156 (45%), Positives = 88/156 (56%), Gaps = 12/156 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G  G+ GA G  G +GE+G KG  G++GP G  GI GD      KGD+G PG +
Sbjct: 243 GPHGPQGTPGKQGAPGTPGPQGEKGSKGDGGLIGPKGAPGIKGD------KGDLGLPGNK 296

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G   D G +G +G MG PG  G  G  G PG PGL G PG  G  G PG  G+PG   +P
Sbjct: 297 G---DVGMKGDRGVMGPPGAQGSKGDSGKPGPPGLLGSPGVKGDQGQPGAQGVPG---LP 350

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G +G  G KG  G  G RG +G+ G+PG+P +   K
Sbjct: 351 GASGPPGAKGEPGSTGLRGLTGLPGIPGSPGVSGMK 386



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 73/157 (46%), Gaps = 12/157 (7%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             QG    + +  PPGL G  G KG+ G  G  GV G  G  G PG  G PG  G+    
Sbjct: 312 GAQGSKGDSGKPGPPGLLGSPGVKGDQGQPGAQGVPGLPGASGPPGAKGEPGSTGL---- 367

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
                +G  G P   GIPG  G  G KGD G PG  G  G  G PG PGL G  G  G  
Sbjct: 368 -----RGLTGLP---GIPGSPGVSGMKGDKGNPGFQGQKGTKGEPGVPGLAGTKGERGQP 419

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G+ G  G PG  G  G  G  G  G+ G +G +G+ G
Sbjct: 420 GLAGPMGAPGPAGQKGNPGLKGSPGLQGVKGEKGEKG 456



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 12/108 (11%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G+ GP G  G PG QG PG  G +G KG  G  G IG  G  G+ G+ G  G+PG  G 
Sbjct: 239 KGEAGPHGPQGTPGKQGAPGTPGPQGEKGSKGDGGLIGPKGAPGIKGDKGDLGLPGNKG- 297

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                        G+ G  G  G  G  G +G+ GK G  G+ G+P +
Sbjct: 298 -----------DVGMKGDRGVMGPPGAQGSKGDSGKPGPPGLLGSPGV 334


>gi|13560500|gb|AAK30078.1|AF336814_1 collagen-like protein B [Streptococcus pyogenes]
          Length = 396

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/182 (44%), Positives = 100/182 (54%), Gaps = 18/182 (9%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGD 156
           QG      E  P G  GP G++G  G +GE G +G   + GE GA G VGP GPQG  G 
Sbjct: 142 QGPAGKDGETGPAGPMGPRGEQGAKGDRGETGPQGPAGKDGEAGAKGEVGPQGPQGETGP 201

Query: 157 EGKRGPKGDMGYPGP------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            G +GP+GD G  GP             G+PG +GK G  G  G PG+ G DG++G  G 
Sbjct: 202 AGPQGPRGDKGEQGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGL 261

Query: 205 PGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG DG  G+NG DG+PGKDG     GKDG+PG +G +G+ G  G  G  GK G +G  G 
Sbjct: 262 PGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGQDGLPGKDGKDGQDGKDGL 321

Query: 262 PA 263
           P 
Sbjct: 322 PG 323



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/169 (45%), Positives = 98/169 (57%), Gaps = 18/169 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDM 166
           G QGP G+ GE G  G MG +GE+G KG  G  GP GP G  G+ G +G      P+G+ 
Sbjct: 140 GEQGPAGKDGETGPAGPMGPRGEQGAKGDRGETGPQGPAGKDGEAGAKGEVGPQGPQGET 199

Query: 167 GYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  GPQG  GD+G++GP    G  G  G+ GL G+DG  G+ G DG+PG++G DG  GKD
Sbjct: 200 GPAGPQGPRGDKGEQGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQNGKD 259

Query: 224 GLPGK---------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           GLPGK         DG+PG +G +G+ G  G  G  GK G +G  G P 
Sbjct: 260 GLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGQDGLPG 308



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 82/146 (56%), Gaps = 12/146 (8%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKG 164
           E  P G QGP G KGE G  G  G  G+ G+ G PG  G  G     G+PG +GK G  G
Sbjct: 198 ETGPAGPQGPRGDKGEQGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQNG 257

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---G 221
                   G+PG +GK G  G  G PG+ G DG++G  G PG DG  G++G DG+P   G
Sbjct: 258 K------DGLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGQDGLPGKDG 311

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPR 247
           KDG  GKDG+PG +G +G+ G   P+
Sbjct: 312 KDGQDGKDGLPGKDGKDGQPGKPAPK 337


>gi|13235592|emb|CAC33779.1| SclB protein [Streptococcus pyogenes]
          Length = 471

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 89/158 (56%), Gaps = 9/158 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------ 165
           PG +G  G KGE GAKGE G KGE G KG PG  G PGP+G PG +G+ GPKG+      
Sbjct: 140 PGPKGEPGAKGEPGAKGEPGAKGEPGAKGEPGAKGEPGPKGEPGAKGEPGPKGEPGPKGE 199

Query: 166 ---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
               G PG +G PG +G+ GPKG+ G  G  G  G  G  GEPG  G PG  G  G  G 
Sbjct: 200 PGAKGEPGAKGEPGAKGEPGPKGEPGAKGEPGAKGEPGAKGEPGAKGEPGAKGEPGAKGD 259

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G  G +G++G  GP G  G+ G +G+PG
Sbjct: 260 RGETGDKGEQGPAGKDGDRGPVGPAGKDGQDGKDGLPG 297



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/176 (46%), Positives = 95/176 (53%), Gaps = 39/176 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G KGE GAKGE G KGE G KG PG  G PG +G PG +G RG  GD G  GP
Sbjct: 212 PGAKGEPGPKGEPGAKGEPGAKGEPGAKGEPGAKGEPGAKGEPGAKGDRGETGDKGEQGP 271

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------------------- 209
            G  GD   RGP   +G  G+ G DG+DGLPG+ G DG                      
Sbjct: 272 AGKDGD---RGP---VGPAGKDGQDGKDGLPGKDGKDGQDGKDGLPGKDGKDGKDGQDGK 325

Query: 210 --IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             +PG++G DG  GKDGLPGKD   G +G NG+ G+       GK G +G PG PA
Sbjct: 326 DGLPGKDGKDGQNGKDGLPGKD---GKDGQNGKDGLP------GKDGKDGQPGKPA 372



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/142 (50%), Positives = 83/142 (58%), Gaps = 6/142 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KGE GAKGE G KGE G KG PG  G PG +G PG +G+ G KG+   PGP+G PG +
Sbjct: 129 GAKGEPGAKGEPGPKGEPGAKGEPGAKGEPGAKGEPGAKGEPGAKGE---PGPKGEPGAK 185

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLPGKDGIPGTN 235
           G+ GPKG+ G  G  G  G  G  GEPG  G P   G  G  G PG  G PG  G PG  
Sbjct: 186 GEPGPKGEPGPKGEPGAKGEPGAKGEPGAKGEPGPKGEPGAKGEPGAKGEPGAKGEPGAK 245

Query: 236 GTNGEKGMTGPRGNRGKSGING 257
           G  G KG  G +G+RG++G  G
Sbjct: 246 GEPGAKGEPGAKGDRGETGDKG 267



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 79/154 (51%), Gaps = 39/154 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G KGE GAKG+ G  G++GE+         GP G  GD G  GP G  G  G 
Sbjct: 242 PGAKGEPGAKGEPGAKGDRGETGDKGEQ---------GPAGKDGDRGPVGPAGKDGQDGK 292

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------PGLDGIPGRNGM 216
            G+PG +GK             G DG+DGLPG+               PG DG  G+NG 
Sbjct: 293 DGLPGKDGK------------DGQDGKDGLPGKDGKDGKDGQDGKDGLPGKDGKDGQNGK 340

Query: 217 DGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPR 247
           DG+PGKDG     GKDG+PG +G +G+ G   P+
Sbjct: 341 DGLPGKDGKDGQNGKDGLPGKDGKDGQPGKPAPK 374



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 6/116 (5%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G +G PG +G+ GPKG+   PG +G PG +G+ G KG+ G  G  G  G  G  GEPG  
Sbjct: 129 GAKGEPGAKGEPGPKGE---PGAKGEPGAKGEPGAKGEPGAKGEPGAKGEPGPKGEPGAK 185

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG  G    PG  G PG  G PG  G  G KG  GP+G  G  G  G  G P  
Sbjct: 186 GEPGPKGE---PGPKGEPGAKGEPGAKGEPGAKGEPGPKGEPGAKGEPGAKGEPGA 238



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 54/110 (49%), Gaps = 3/110 (2%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G +G +G  G  G PGP+G PG +G+ G KG+ G  G  G  G  G  GEPG  G PG  
Sbjct: 126 GQDGAKGEPGAKGEPGPKGEPGAKGEPGAKGEPGAKGEPGAKGEPGAKGEPGPKGEPG-- 183

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G PG  G PG  G PG  G  G KG  G +G  G  G  G  G P  
Sbjct: 184 -AKGEPGPKGEPGPKGEPGAKGEPGAKGEPGAKGEPGPKGEPGAKGEPGA 232



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGT 234
           +G+ G KG+ G  G  G  G  G  GEPG  G PG     G  G PG  G PG  G PG 
Sbjct: 125 DGQDGAKGEPGAKGEPGPKGEPGAKGEPGAKGEPGAKGEPGAKGEPGAKGEPGPKGEPGA 184

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G KG  GP+G  G  G  G  G P  
Sbjct: 185 KGEPGPKGEPGPKGEPGAKGEPGAKGEPGA 214


>gi|402855130|ref|XP_003892193.1| PREDICTED: collagen alpha-1(XXIV) chain [Papio anubis]
          Length = 1733

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 94/167 (56%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG   P G  GIPG 
Sbjct: 1249 VGVPGLRGATGQQGPPGEPG---DQGEQGLKGERGCEGYKGKKGAPG---PSGKAGIPGL 1302

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G  GPKG  GY G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+
Sbjct: 1303 QGLPGPKGIQGYHGADGISGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGL 1362

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G PG  G  G+ G+PG  G  G +G  G +G++G  G  G+ G P 
Sbjct: 1363 PGSPGIQGPKGEQGLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQPG 1409



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 101/185 (54%), Gaps = 18/185 (9%)

Query: 96   LVAMQGFCNSTKEYC---PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L  +QG      E     PPG++G  G +GE GAKG++G  G  GE G PG+ G PG   
Sbjct: 1013 LRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDVGPAGSVGETGEPGLRGEPG--- 1069

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDG 209
             PG+EG +G  G  G  G +G+PG++G+   KGDMG PG IG  GR    GLPG  G+ G
Sbjct: 1070 APGEEGLQGKDGLKGVSGGRGLPGEDGE---KGDMGLPGIIGPLGRSGQMGLPGPEGIVG 1126

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGTPA 263
            IPG+ G  G  G  G  G  G  G+ G+ G+ G +GP+G RG        G+ G  G P 
Sbjct: 1127 IPGQRGRAGKKGDKGQIGPTGEVGSRGSPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPG 1186

Query: 264  ICAYK 268
            I  Y+
Sbjct: 1187 IPGYR 1191



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 99/177 (55%), Gaps = 9/177 (5%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+  QG   +  E    G +GP G  G+ G  GE GV+G+ G +G PG  G    +G+PG
Sbjct: 953  LLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQGKPGLQGLPGSTGD---RGLPG 1009

Query: 156  DEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            + G RG +GD+G PG  GI   PG EG+ G +G+ G  G +G  G  G  GEPGL G PG
Sbjct: 1010 EPGLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDVGPAGSVGETGEPGLRGEPG 1069

Query: 213  RNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
              G +G+ GKDGL    G  G+PG +G  G+ G+ G  G  G+SG  G+PG   I  
Sbjct: 1070 APGEEGLQGKDGLKGVSGGRGLPGEDGEKGDMGLPGIIGPLGRSGQMGLPGPEGIVG 1126



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 94/178 (52%), Gaps = 19/178 (10%)

Query: 112  PGLQGPIGQKGEIGAKGE----------------MGVKGERGEKGAPGVVGPPGPQGIPG 155
            PGL G  G KGE G  GE                +G +GERGE GA G  G  G  G+ G
Sbjct: 1197 PGLSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRG 1256

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG---RIGLDGRDGLPGEPGLDGIPG 212
              G++GP G+ G  G QG+ G+ G  G KG  G PG   + G+ G  GLPG  G+ G  G
Sbjct: 1257 ATGQQGPPGEPGDQGEQGLKGERGCEGYKGKKGAPGPSGKAGIPGLQGLPGPKGIQGYHG 1316

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             +G+ G PGK G PGK G+PG  G+ G  G+ G  G  G  G +G+PG+P I   K E
Sbjct: 1317 ADGISGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGE 1374



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 93/165 (56%), Gaps = 9/165 (5%)

Query: 105  STKEYCPPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG---PQGIPGDEG 158
            ST     PG QGP GQ+G  G  G   E G++G +GEKG  G  GP G     G PG+ G
Sbjct: 929  STGXXXXPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERG 988

Query: 159  KRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             +G  G  G PG    +G+PG+ G RG +GD+G PG +G++G  G+ GE GL G PG  G
Sbjct: 989  VQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKG 1048

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G  G+ G+ G  G  GE+G+ G  G +G SG  G+PG
Sbjct: 1049 DVGPAGSVGETGEPGLRGEPGAPGEEGLQGKDGLKGVSGGRGLPG 1093



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 92/180 (51%), Gaps = 27/180 (15%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +GV G RG   ++G PG  G  G QG+ G+ G  G KG  G PGP
Sbjct: 1234 QGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGCEGYKGKKGAPGP 1293

Query: 172  QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G   IPG +G  GPKG  GY         PG++G  G+ GL   PG+ G PGR G+ G 
Sbjct: 1294 SGKAGIPGLQGLPGPKGIQGYHGADGISGNPGKVGPPGKQGL---PGIRGSPGRTGLAGA 1350

Query: 220  PGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G+ G  G+PG+ G  G K         G+ G RG+RG  G  G  G P +     E
Sbjct: 1351 PGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQPGE 1410



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 90/178 (50%), Gaps = 12/178 (6%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S  E   PGL+G  G  GE G +G+ G+KG  G +G PG  G  G  G+PG  G  
Sbjct: 1051 GPAGSVGETGEPGLRGEPGAPGEEGLQGKDGLKGVSGGRGLPGEDGEKGDMGLPGIIGPL 1110

Query: 161  GPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G  G MG PGP+GI   PG  G+ G KGD G  G  G  G  G PG+ G  G  G  G  
Sbjct: 1111 GRSGQMGLPGPEGIVGIPGQRGRAGKKGDKGQIGPTGEVGSRGSPGKIGKSGPKGARGTR 1170

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
            G  G  GL G D         GE G+ G RG++G+ G++G+PG      Y  E  ++L
Sbjct: 1171 GAVGHLGLMGPD---------GEPGIPGYRGHQGQPGLSGLPGPKGEKGYPGEDSTVL 1219



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 94/199 (47%), Gaps = 48/199 (24%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGE------------MGVKGERGEKGAPGVVGP-------- 147
            E  P GL+G +G +G IG  GE             G  GE+GE+G+PG +GP        
Sbjct: 851  EPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGTTGSIGEKGERGSPGPLGPQGEKGVMG 910

Query: 148  -------------------------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
                                     PG QG  G  G RGP G +G  G QG  G++G +G
Sbjct: 911  YPGPPGVPGPIGPLGLPVSTGXXXXPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQG 970

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             +G  G  G+ G  G  G+ G+PGL G+PG  G  G+PG+   PG  G+ G  G  GE G
Sbjct: 971  KRGPHGLIGKTGNPGERGVQGKPGLQGLPGSTGDRGLPGE---PGLRGLQGDVGPPGEMG 1027

Query: 243  MTGPRGNRGKSGINGVPGT 261
            + GP G  G+SG+ G PG 
Sbjct: 1028 IEGPPGIEGESGLQGEPGA 1046



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 89/164 (54%), Gaps = 12/164 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQG  G  G+ G  GE G++G +G+ G PG +G  GP GI G+ G +G  G  G  GP
Sbjct: 993  PGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDVGP 1052

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIP-------- 220
             G  G+ G+ G +G+ G PG  GL G+DGL G  G  G+PG +G     G+P        
Sbjct: 1053 AGSVGETGEPGLRGEPGAPGEEGLQGKDGLKGVSGGRGLPGEDGEKGDMGLPGIIGPLGR 1112

Query: 221  -GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ GLPG +GI G  G  G  G  G +G  G +G  G  G+P 
Sbjct: 1113 SGQMGLPGPEGIVGIPGQRGRAGKKGDKGQIGPTGEVGSRGSPG 1156



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 91/175 (52%), Gaps = 27/175 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGDM 166
           GL GP G +G+ G KG  G+ G RGE+G PG  G       PG QG+ G EG  GPKG  
Sbjct: 577 GLMGPPGMQGDKGLKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGHPGPKGAR 636

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPG---RIGLDGRDGLPGE------PGLDGIPG----- 212
           G+    G PG+ G+ GP+G+ G PG   + G  GR G PG+       GLDG PG     
Sbjct: 637 GF---IGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGT 693

Query: 213 ----RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                 G+ G  G  G  G  GIPG  G +G KG+ G +G++G+ G  G  G P 
Sbjct: 694 GPPGFPGLRGSVGPVGPIGPAGIPGPVGLSGNKGLPGIKGDKGEQGTAGELGEPG 748



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 84/165 (50%), Gaps = 9/165 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------QGIPGDEGKRGPKGDM 166
            G  G  G  G++G  G+ G+ G RG  G  G+ G PGP       G+PG  G +GPKG+ 
Sbjct: 1316 GADGISGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQ 1375

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G PG  GI G  G RG +GD G  G  GL G+   PGE G+ G+ G  G  G  G +G  
Sbjct: 1376 GLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQ---PGEYGVQGLTGFQGFPGPKGPEGDA 1432

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  GI G  G  G++G TGP G  G  G  G  G      ++ E+
Sbjct: 1433 GIVGISGPKGPIGQRGNTGPLGREGIIGPTGRTGPRGEKGFRGET 1477



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 83/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
           PG  G IG  G  G +G  G +G  G KGA G +G PG  G  G EG+R   G +G  G+
Sbjct: 606 PGFAGNIGSPGYPGRQGLAGPEGHPGPKGARGFIGSPGEAGQLGPEGERGIPGIRGKKGF 665

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGI 210
            G QG PGD G RGP G  G PG                   +G  G  G+PG  GL G 
Sbjct: 666 KGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPVGLSGN 725

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G+ G  G+ G PG  G  G  G+ GP G RGK G +G PG
Sbjct: 726 KGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQPG 775



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 99/249 (39%), Gaps = 75/249 (30%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           +   G+        P G  GP G +G IG+ GE G  G  GE+G PG+ G  G    QG 
Sbjct: 612 IGSPGYPGRQGLAGPEGHPGPKGARGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGF 671

Query: 154 PGDEGKRGPKGDMGYPG------------------------PQGIPG------------- 176
           PGD G RGP G  G PG                        P GIPG             
Sbjct: 672 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPVGLSGNKGLPGI 731

Query: 177 --DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------------- 217
             D+G++G  G++G PG  G  G  GLPG PG+ G PG +G                   
Sbjct: 732 KGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQPGDPGLQGPSGPPGPEGF 791

Query: 218 ----GIPGKDGLPGKDGIPGT---------NGTNGEKGMTGPRGN---RGKSGINGVPGT 261
               GIPG++G  G  G+ G           GT GE+G  GP G    RGK G  G  G 
Sbjct: 792 PGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPVGPFGELGPRGKPGQKGYAGE 851

Query: 262 PAICAYKRE 270
           P     K E
Sbjct: 852 PGPEGLKGE 860



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 74/140 (52%), Gaps = 3/140 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G  G+ G  GA G  GVKG  G  G+PG+ GP G QG+PG  G +G +G  G  G 
Sbjct: 1336 PGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGTRGHRGAQGD 1395

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG  G+ G +G  G+ G     GL G  G PG  G +G  G  G+ G  G  G  G  G 
Sbjct: 1396 QGPCGEPGLKGQPGEYGV---QGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGQRGNTGP 1452

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G  G  G TGPRG +G
Sbjct: 1453 LGREGIIGPTGRTGPRGEKG 1472



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 86/176 (48%), Gaps = 24/176 (13%)

Query: 119 GQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G+KG+ G  G MG   ++G++G KG PG+ G  G QGIPG  G     G  GYPG QG+ 
Sbjct: 568 GEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLRGEQGIPGFAGN---IGSPGYPGRQGLA 624

Query: 176 GDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G EG  GPKG  G+       G++G +G  G+PG  G  G  GR G  G  G  G  G D
Sbjct: 625 GPEGHPGPKGARGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLD 684

Query: 230 GIPG------------TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           G PG              G+ G  G  GP G  G  G++G  G P I   K E  +
Sbjct: 685 GSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPVGLSGNKGLPGIKGDKGEQGT 740



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 85/177 (48%), Gaps = 33/177 (18%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G +G  GE+G +G+ G+K   G  G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 821 LKGTQGEEGPVGPFGELGPRGKPGQK---GYAGEPGPEGLKGEVGDQGNIGKIGETGPVG 877

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDGL---------------------------PG 203
           +PG+    G  G KG+ G PG +G  G  G+                           PG
Sbjct: 878 LPGEVGTTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPVSTGXXXXPG 937

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G DG+ G+ G+ G  G  G  G  G  G+ G  GN G+ G+ G PG
Sbjct: 938 SQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQGKPG 994



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 87/182 (47%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
           GL G  G KGE G  GE+G  G  G+KGA G+ GPPG +G PG  G+ G           
Sbjct: 727 GLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQPGDPGLQGPSGPP 786

Query: 162 ----PKGDMGYPG---PQG---------------IPGDEGKRGPKGDMGYPGRIGLDGRD 199
                 GD+G PG   P+G               + G +G+ GP G  G  G  G  G+ 
Sbjct: 787 GPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPVGPFGELGPRGKPGQK 846

Query: 200 GLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  GEPG +G+ G  G  G  GK       GLPG+ G  G+ G  GE+G  GP G +G+ 
Sbjct: 847 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGTTGSIGEKGERGSPGPLGPQGEK 906

Query: 254 GI 255
           G+
Sbjct: 907 GV 908



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 61/110 (55%), Gaps = 3/110 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+QGP G++G  G  G  G +G RG +G  G  G PG +G PG+ G +G  G  G+PGP
Sbjct: 1366 PGIQGPKGEQGLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQPGEYGVQGLTGFQGFPGP 1425

Query: 172  QGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            +G  GD    G  GPKG +G  G  G  GR+G+ G  G  G  G  G  G
Sbjct: 1426 KGPEGDAGIVGISGPKGPIGQRGNTGPLGREGIIGPTGRTGPRGEKGFRG 1475



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 68/151 (45%), Gaps = 28/151 (18%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDE----------------GKRGPKGDMGYPGPQGIPGDE 178
           +RG +G PG+       G   +E                   GPKGD G+   Q +PG++
Sbjct: 511 KRGPRGIPGLSSGTSSDGYNKEEVNLEDKLSLKKKKIFLSSGGPKGDPGFSPGQAVPGEK 570

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRN---GMDGIPGKDGLPGKDGIP 232
           G +G  G MG PG  G  G  G PG PGL    GIPG     G  G PG+ GL G +G P
Sbjct: 571 GDQGLSGLMGPPGMQGDKGLKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGHP 630

Query: 233 GTNGTN------GEKGMTGPRGNRGKSGING 257
           G  G        GE G  GP G RG  GI G
Sbjct: 631 GPKGARGFIGSPGEAGQLGPEGERGIPGIRG 661


>gi|194384796|dbj|BAG59558.1| unnamed protein product [Homo sapiens]
          Length = 495

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/170 (46%), Positives = 95/170 (55%), Gaps = 18/170 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +GE+G KG  G++GP G  G         +PG +G RG K
Sbjct: 180 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMK 239

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNG-- 215
           GD   MG PG QG  GD G+ GP G  G+PG  G  G+ GL   PG PG  G PG  G  
Sbjct: 240 GDAGVMGPPGAQGSKGDFGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 299

Query: 216 -MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G PG+ GLPG  G PG  G  G KG TG +G +G+ G +GVPG   +
Sbjct: 300 GSAGSPGRAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGV 349



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 92/163 (56%), Gaps = 18/163 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD G+ GP       
Sbjct: 210 GLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQGSKGDFGRPGPPGLAGFP 269

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD 217
             KGD G PG QG+PG  G  G  G  G PG  G  GR GL   PG PG  G+ G  G  
Sbjct: 270 GAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGSKGDT 329

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGING 257
           G+ G+ G  G+ G+PG  G  GE+   G+ GP+G  G++G  G
Sbjct: 330 GLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPGQAGQKG 372



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 86/176 (48%), Gaps = 33/176 (18%)

Query: 123 EIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E GAKG MG               VKGE G +G  G  G  G  G PG +G++G KGD G
Sbjct: 151 EKGAKGAMGRDGATGPSGPQGPPGVKGEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGG 210

Query: 168 YPGPQ------------GIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPG 212
             GP+            G+PG +G RG KGD   MG PG  G  G  G PG PGL G PG
Sbjct: 211 LIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQGSKGDFGRPGPPGLAGFPG 270

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G PG  G+PG    PG  G  G KG  G  G+ G++G+ G PG+P     K
Sbjct: 271 AKGDQGQPGLQGVPGP---PGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLK 323



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G  G  G  G +G++G PG+ G PGP G  G  G +G  G  G PG
Sbjct: 247 PPGAQGSKGDFGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPG 306

Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G+PG  G       +G KGD G  G+ G  G  G+PG  G+ G  G  G+ G  G  G
Sbjct: 307 RAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPG 366

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G+ G  G  G++GE+G+ G +G RG++ ++
Sbjct: 367 QAGQKGDQGVKGSSGEQGVKGEKGERGENSVS 398



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 52/132 (39%), Gaps = 33/132 (25%)

Query: 170 GPQGIPGDEG------------------KRGPKGDMG---------------YPGRIGLD 196
           G QG PG +G                  ++G KG MG                 G  GL 
Sbjct: 123 GEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAMGRDGATGPSGPQGPPGVKGEAGLQ 182

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G PG+ G  G PG  G  G  G  GL G  G  GT G  G+ G+ G +G+RG  G  
Sbjct: 183 GPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDA 242

Query: 257 GVPGTPAICAYK 268
           GV G P     K
Sbjct: 243 GVMGPPGAQGSK 254


>gi|94992348|ref|YP_600447.1| collagen-like surface protein [Streptococcus pyogenes MGAS2096]
 gi|94545856|gb|ABF35903.1| Collagen-like surface protein [Streptococcus pyogenes MGAS2096]
          Length = 402

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 100/179 (55%), Gaps = 15/179 (8%)

Query: 88  LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
           LN+Y ++   ++        E  P G  GP G +G  G +GE G +G+RGE G  G  GP
Sbjct: 56  LNSYLKVLDGSLSQLKGEKGERGPVGPAGPQGLQGTKGDRGETGEQGQRGETGPAGPQGP 115

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            GP          GP G  G  G QG  G  GK G  G  G PG+ G +G+DGLPG+ G 
Sbjct: 116 AGP---------VGPAGKDGEAGAQGPVGPAGKDGQDGKDGLPGKDGQNGKDGLPGKDGQ 166

Query: 208 ---DGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              DG+PG++G DG  GKDGLP   GKDG+PG +G NG+ G+ G  G  G+ G +G+PG
Sbjct: 167 NGKDGLPGKDGKDGQDGKDGLPGKDGKDGLPGKDGQNGKDGLPGKDGKDGQDGKDGLPG 225



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 95/154 (61%), Gaps = 6/154 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G QGP+G  G+ G  G+ G+    G+ G+ G PG  G  G  G+PG +GK G  G  G P
Sbjct: 129 GAQGPVGPAGKDGQDGKDGLPGKDGQNGKDGLPGKDGQNGKDGLPGKDGKDGQDGKDGLP 188

Query: 170 GPQG---IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  G   +PG +G+ G  G  G  G+ G DG+DGLPG+ G DG+PG++G DG  GKDG  
Sbjct: 189 GKDGKDGLPGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGLPGKDGKDGQNGKDGQN 248

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           GKDG+PG +G NG+ G+ G  G  G+ G +G+PG
Sbjct: 249 GKDGLPGKDGQNGKDGLPGKDGKDGQDGKDGLPG 282



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 81/135 (60%), Gaps = 9/135 (6%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG---IP 175
           G+ G+ G  G+ G+ G+ G+ G PG  G  G  G+PG +GK G  G  G PG  G   +P
Sbjct: 174 GKDGKDGQDGKDGLPGKDGKDGLPGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGLP 233

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG---IP 232
           G +GK G  G  G  G+ GL G+DG   + G DG+PG++G DG  GKDGLPGKDG   +P
Sbjct: 234 GKDGKDGQNGKDGQNGKDGLPGKDG---QNGKDGLPGKDGKDGQDGKDGLPGKDGKDGLP 290

Query: 233 GTNGTNGEKGMTGPR 247
           G +G +G+ G   P+
Sbjct: 291 GKDGKDGQPGKPAPK 305



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 15/121 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  GQ G+ G  G+ G  G+ G+ G PG  G     G+PG +GK G  G  G  G  
Sbjct: 195 GLPGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGK---DGLPGKDGKDGQNGKDGQNGKD 251

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG +G+ G     G PG+ G DG+D      G DG+PG++G DG+PGKD   GKDG P
Sbjct: 252 GLPGKDGQNG---KDGLPGKDGKDGQD------GKDGLPGKDGKDGLPGKD---GKDGQP 299

Query: 233 G 233
           G
Sbjct: 300 G 300


>gi|225868100|ref|YP_002744048.1| collagen-binding collagen-like surface-anchored protein FneF
           [Streptococcus equi subsp. zooepidemicus]
 gi|225701376|emb|CAW98441.1| putative collagen-binding collagen-like surface-anchored protein
           FneF [Streptococcus equi subsp. zooepidemicus]
          Length = 750

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/181 (44%), Positives = 96/181 (53%), Gaps = 36/181 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           GL GP G+KG  G KG+ G  GERGE+G  G+ GP G  GIPG   ++GK G  G  G P
Sbjct: 273 GLNGPRGEKGPKGEKGDPGKPGERGERGPQGLPGPKGEPGIPGPKGEDGKDGAPGHDGQP 332

Query: 170 GPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPG----------------------- 203
           GP+G  GD GK   RGPKG+ G PG  G +G+DG PG                       
Sbjct: 333 GPKGEKGDPGKPGERGPKGEPGIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGKP 392

Query: 204 -------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                  EPG+ G  G NG DG PG+DG  GKDG PG  G  G+ G  G RG +G+ GI 
Sbjct: 393 GERGPKGEPGIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGKPGERGPKGEPGIP 452

Query: 257 G 257
           G
Sbjct: 453 G 453



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/163 (46%), Positives = 89/163 (54%), Gaps = 21/163 (12%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDEGKRGPKGDMGYP 169
           GQ G  G KG+ G  GERG KG PG+ GP         PG  G  G +G+ GPKG+ G P
Sbjct: 330 GQPGPKGEKGDPGKPGERGPKGEPGIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDP 389

Query: 170 G------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------NGMD 217
           G      P+G PG  G RG  G  G PGR G +G+DG PG  G  G PG+       G  
Sbjct: 390 GKPGERGPKGEPGIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGKPGERGPKGEP 449

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           GIPG  G  GKDG PG +G NG+ G  GP+G +G  G  G+PG
Sbjct: 450 GIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGQQGIPG 492



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/195 (40%), Positives = 100/195 (51%), Gaps = 24/195 (12%)

Query: 112 PGLQGPIGQKGEIGA---------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDE----- 157
           PG+ GP G+ G+ GA          G+ G KGE+G+ G PG  GP G  GIPG       
Sbjct: 353 PGIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGKPGERGPKGEPGIPGPRGENGK 412

Query: 158 ----GKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLP---GEPGL 207
               G+ G  G  G PGP+G  GD GK   RGPKG+ G PG  G +G+DG P   G+ G 
Sbjct: 413 DGAPGRDGQNGKDGQPGPKGEKGDPGKPGERGPKGEPGIPGPRGENGKDGAPGRDGQNGK 472

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           DG PG  G  G PG+ G+PG  G PG +G +GEKG  G +G +G+ G  G  G       
Sbjct: 473 DGQPGPKGEKGDPGQQGIPGPKGDPGRDGKDGEKGERGEQGPQGERGEQGPQGERGEQGP 532

Query: 268 KRESCSLLPNSETSQ 282
           + E     P  E  +
Sbjct: 533 QGERGEQGPQGERGE 547



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/153 (46%), Positives = 87/153 (56%), Gaps = 6/153 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           P G +G  G+ GE G KGE G+ G RGE    GAPG  G  G  G PG +G++G  G  G
Sbjct: 382 PKGEKGDPGKPGERGPKGEPGIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGKPG 441

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---DGIPGKDG 224
             GP+G PG  G RG  G  G PGR G +G+DG PG  G  G PG+ G+    G PG+DG
Sbjct: 442 ERGPKGEPGIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGQQGIPGPKGDPGRDG 501

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G+ G  G  G  GE+G  GP+G RG+ G  G
Sbjct: 502 KDGEKGERGEQGPQGERGEQGPQGERGEQGPQG 534



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 83/152 (54%), Gaps = 9/152 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE------RGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG+ GP G+ G+ GA G  G  G+      +GEKG PG  G PGP+G PG +GK G KG+
Sbjct: 449 PGIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGQQGIPGPKGDPGRDGKDGEKGE 508

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  GPQ   G+ G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G+ G 
Sbjct: 509 RGEQGPQ---GERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGE 565

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G  G  GE+G  GP+G RG+ G  G
Sbjct: 566 QGPQGERGEQGPQGERGEQGPQGERGEQGPQG 597



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 80/150 (53%), Gaps = 3/150 (2%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMG 167
           P G +G  G+ GE G KGE G+ G RGE G   APG  G  G  G PG +G++G  G  G
Sbjct: 430 PKGEKGDPGKPGERGPKGEPGIPGPRGENGKDGAPGRDGQNGKDGQPGPKGEKGDPGQQG 489

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            PGP+G PG +GK G KG+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G
Sbjct: 490 IPGPKGDPGRDGKDGEKGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQG 549

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G  GE+G  GP+G RG+ G  G
Sbjct: 550 PQGERGEQGPQGERGEQGPQGERGEQGPQG 579



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/145 (45%), Positives = 77/145 (53%), Gaps = 3/145 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  GQ G  G KG+ G  GERG KG PG+ GP G  G  G  G+ G  G  G PGP+
Sbjct: 420 GQNGKDGQPGPKGEKGDPGKPGERGPKGEPGIPGPRGENGKDGAPGRDGQNGKDGQPGPK 479

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  GD G++G  G  G PGR   DG+DG  GE G  G  G  G  G  G+ G  G  G  
Sbjct: 480 GEKGDPGQQGIPGPKGDPGR---DGKDGEKGERGEQGPQGERGEQGPQGERGEQGPQGER 536

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  GE+G  GP+G RG+ G  G
Sbjct: 537 GEQGPQGERGEQGPQGERGEQGPQG 561



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 81/145 (55%), Gaps = 6/145 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +G  G++G  G +GE G +GERGE+G  G  G  GPQG   + G++GP+G+ G  GPQ
Sbjct: 504 GEKGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQG---ERGEQGPQGERGEQGPQ 560

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G   + G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G  G  
Sbjct: 561 G---ERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGER 617

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  GE+G  GP+G RG+ G  G
Sbjct: 618 GEQGPQGERGEQGPQGERGEQGPRG 642



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 77/145 (53%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  GQ G+ G  G  G KG+ G++G PG  G PG  G  G++G+RG +G  G  G Q
Sbjct: 462 GAPGRDGQNGKDGQPGPKGEKGDPGQQGIPGPKGDPGRDGKDGEKGERGEQGPQGERGEQ 521

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G+ G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G  G  
Sbjct: 522 GPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGER 581

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  GE+G  GP+G RG+ G  G
Sbjct: 582 GEQGPQGERGEQGPQGERGEQGPQG 606



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 3/114 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G++GE G +GE G +G +GE+G  G  G  G QG  G+ G++GP+G+ G  GPQ
Sbjct: 537 GEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQ 596

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G   + G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G++  P
Sbjct: 597 G---ERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPRGENHTP 647



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 47/114 (41%), Gaps = 18/114 (15%)

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+ G  G++GPKG+ G PG+ G  G                 G  G+PG  G PG   IP
Sbjct: 273 GLNGPRGEKGPKGEKGDPGKPGERGE---------------RGPQGLPGPKGEPG---IP 314

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           G  G +G+ G  G  G  G  G  G PG P     K E     P  E  +   P
Sbjct: 315 GPKGEDGKDGAPGHDGQPGPKGEKGDPGKPGERGPKGEPGIPGPRGENGKDGAP 368


>gi|397467268|ref|XP_003805346.1| PREDICTED: collagen alpha-1(XXIV) chain [Pan paniscus]
          Length = 1714

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/158 (47%), Positives = 93/158 (58%), Gaps = 6/158 (3%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGD 165
            PGL+G  GQ+G   E G +GE G+KGERG +G  G  G PGP    GIPG +G  GPKG 
Sbjct: 1233 PGLRGATGQQGPPGETGDQGEQGLKGERGSEGNKGRKGAPGPSGKPGIPGLQGLLGPKGI 1292

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GY G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+ G PG  G 
Sbjct: 1293 QGYHGTDGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGP 1352

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ G+PG  G  G++G  G +G++G  G  G+ G P 
Sbjct: 1353 KGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPG 1390



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/169 (44%), Positives = 99/169 (58%), Gaps = 15/169 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGP---QGIPGDEGKRGPK 163
            G+QG  G+KG+ G +G  G+       GERG +G PG+ G PG    +G+PG+ G RG +
Sbjct: 939  GIQGAKGEKGDQGERGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQ 998

Query: 164  GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GD+G PG  G+   PG EG+ G +G+ G  G +G  G  G  GEPGL G PG  G +G+ 
Sbjct: 999  GDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQ 1058

Query: 221  GKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            GKDGL   PG  G+PG +G  GE G+ G  G  G+SG  G+PG   I  
Sbjct: 1059 GKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVG 1107



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 91/189 (48%), Gaps = 27/189 (14%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            V  QG      E  P GL G +G  G IG KGE G  G  G +G  GV+           
Sbjct: 842  VGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGP 901

Query: 146  -------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                         GPPG QG  G  G RGP G +G  G QG  G++G +G +G  G  G+
Sbjct: 902  IGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGERGPHGLIGK 961

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G  G  G  G+PGL G+PG  G  G+PG+ GL    G+ G  G  GE GM GP G  G+
Sbjct: 962  TGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGL---RGLQGDVGPPGEMGMEGPPGTEGE 1018

Query: 253  SGINGVPGT 261
            SG+ G PG 
Sbjct: 1019 SGLQGEPGA 1027



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 92/182 (50%), Gaps = 12/182 (6%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG   ST +   PG  G  G +G++G  GEMG++G  G +G  G+ G PG +G  G  
Sbjct: 975  GLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTA 1034

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------- 210
            G  G  G+ G  G  G PG+EG +G  G  G PG  GL G DG  GE GL GI       
Sbjct: 1035 GSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRS 1094

Query: 211  -----PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                 PG  G+ GIPG+ G PGK G  G  G  GE G  GP G  GKSG  G  GT    
Sbjct: 1095 GQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGRIGKSGPKGARGTRGAV 1154

Query: 266  AY 267
             +
Sbjct: 1155 GH 1156



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 93/206 (45%), Gaps = 51/206 (24%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------- 143
            V + G   +T +  PPG     G +GE G KGE G +G +G KGAPG             
Sbjct: 1230 VGVPGLRGATGQQGPPGE---TGDQGEQGLKGERGSEGNKGRKGAPGPSGKPGIPGLQGL 1286

Query: 144  --------------------VVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGD 177
                                 +GPPG QG+PG  G  G  G  G PGP       G+PG 
Sbjct: 1287 LGPKGIQGYHGTDGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGS 1346

Query: 178  EGKRGPKGDMGYPGRIGLDGR---------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             G +GPKG+ G PG+ G+ G+          G  G+PGL G PG  G+ G+ G  G PG 
Sbjct: 1347 PGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGP 1406

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G  G  G  GP G+RG +G
Sbjct: 1407 KGPEGDAGIVGISGPKGPVGHRGNTG 1432



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 94/189 (49%), Gaps = 16/189 (8%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM-------------GVKGERGEKGAPGV 144
             + G+     +  P GL GP G+KG  G    +             G +GERGE GA G 
Sbjct: 1167 GIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGY 1226

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             G  G  G+ G  G++GP G+ G  G QG+ G+ G  G KG  G PG  G  G  GL G 
Sbjct: 1227 KGHVGVPGLRGATGQQGPPGETGDQGEQGLKGERGSEGNKGRKGAPGPSGKPGIPGLQGL 1286

Query: 205  PGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  GI G +G DGI   PGK G PGK G+PG  G  G  G+ G  G  G  G +G+PG+
Sbjct: 1287 LGPKGIQGYHGTDGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGS 1346

Query: 262  PAICAYKRE 270
            P I   K E
Sbjct: 1347 PGIQGPKGE 1355



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 83/149 (55%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G      V GE+G++G  G++GPPG QG   D+G +G  G  G PG 
Sbjct: 527 PGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQG---DKGLKGHPGLPGLPGE 583

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QGIPG  G     G  GYPGR GL G +G PG  G  G  G  G  G  G +G  G  GI
Sbjct: 584 QGIPGFAGN---IGSPGYPGRQGLAGPEGNPGPKGARGFIGSPGEAGQLGPEGERGIPGI 640

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G +G  G  G+RG +G++G PG
Sbjct: 641 RGKKGFKGRQGFPGDFGDRGPAGLDGSPG 669



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 81/167 (48%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V   G    T E   PGL+G  G  GE G +G+ G+KG  G +G PG  G  G  G+PG 
Sbjct: 1031 VGTAGSVGGTGE---PGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGI 1087

Query: 157  EGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G  G  G  G PGP+GI   PG  G+ G KGD G  G  G  G  G PG  G  G  G 
Sbjct: 1088 IGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGRIGKSGPKGA 1147

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  GL G DG PG  G  G +G  GP G  G  G  G PG
Sbjct: 1148 RGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPG 1194



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 84/157 (53%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G +GE GA GE G++G+ G KG PG  G PG  G  G+ G  G  G +G  G  G+PG E
Sbjct: 1044 GLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPE 1103

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  G  G  G PG+ G  G+ G  GE G  G PGR G  G  G  G  G  G  G  G +
Sbjct: 1104 GIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGRIGKSGPKGARGTRGAVGHLGLMGPD 1163

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
            GE G+ G RG++G+ G +G+PG      Y  E  ++L
Sbjct: 1164 GEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVL 1200



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 72/132 (54%), Gaps = 12/132 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---G 194
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q +PG++G +G  G MG PG     G
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKG 570

Query: 195 LDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTN------GEKGMTG 245
           L G  GLPG PG  GIPG     G  G PG+ GL G +G PG  G        GE G  G
Sbjct: 571 LKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGARGFIGSPGEAGQLG 630

Query: 246 PRGNRGKSGING 257
           P G RG  GI G
Sbjct: 631 PEGERGIPGIRG 642



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 87/190 (45%), Gaps = 45/190 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGDM 166
           GL GP G +G+ G KG  G+ G  GE+G PG  G       PG QG+ G EG  GPKG  
Sbjct: 558 GLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAR 617

Query: 167 GY------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------- 207
           G+             G +GIPG  GK+G KG  G+PG  G  G  GL G PGL       
Sbjct: 618 GFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPP 677

Query: 208 -----------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                             GIPG  G+    G  GLPG  G  G  GT GE G  G  G++
Sbjct: 678 GFPGLRGSVGPVGPIGPAGIPGPMGLS---GNKGLPGIKGDKGEQGTAGELGEPGYPGDK 734

Query: 251 GKSGINGVPG 260
           G  G+ G PG
Sbjct: 735 GAVGLPGPPG 744



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 95/197 (48%), Gaps = 31/197 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGI---PGDEGKR 160
            GLQG  G KG  G +G  G  GE+GE G PG++GP         PGP+GI   PG  G+ 
Sbjct: 1056 GLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRP 1115

Query: 161  GPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G KGD G  GP      +G PG  GK GPKG  G  G +G  G  G  GEPG   IPG  
Sbjct: 1116 GKKGDKGQIGPTGEVGSRGPPGRIGKSGPKGARGTRGAVGHLGLMGPDGEPG---IPGYR 1172

Query: 215  GMDGIPGKDGLPG---KDGIPGTNGT-------NGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G PG  GLPG   + G PG + T        GE G  G +G RG+ G  G  G   +
Sbjct: 1173 GHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGV 1232

Query: 265  CAYKRESCSLLPNSETS 281
               +  +    P  ET 
Sbjct: 1233 PGLRGATGQQGPPGETG 1249



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 84/175 (48%), Gaps = 27/175 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYP 169
           G +G  GQKG  G  G  G+KGE G++G  G +G  GP G+PG+    G  G KG+ G P
Sbjct: 819 GPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSP 878

Query: 170 GPQG------------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GP G                        +PG  G RGP G  G  G+ G  G DGL GE 
Sbjct: 879 GPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQ 938

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G  G  G  G  G  GL GK G PG  G  G+ G+ G  G+ G  G+ G PG
Sbjct: 939 GIQGAKGEKGDQGERGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPG 993



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 103/235 (43%), Gaps = 57/235 (24%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAK---------------GEMGVKGERGEKGAPGV 144
            +G    T E    G  G IG+ G  GA+               GE G+ G RG +G PG 
Sbjct: 1121 KGQIGPTGEVGSRGPPGRIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGP 1180

Query: 145  VGPPGPQGIPG----------------------DEGKRGPKGDMGYPGPQGIP---GDEG 179
             G PGP+G  G                      ++G+RG  G  GY G  G+P   G  G
Sbjct: 1181 SGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRGATG 1240

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN- 238
            ++GP G+ G  G  GL G  G  G  G  G PG +G  GIPG  GL G  GI G +GT+ 
Sbjct: 1241 QQGPPGETGDQGEQGLKGERGSEGNKGRKGAPGPSGKPGIPGLQGLLGPKGIQGYHGTDG 1300

Query: 239  -----------GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
                       G++G+ G RG  G++G+ G PG P +     +  S LP S   Q
Sbjct: 1301 ISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGV-----KGSSGLPGSPGIQ 1350



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 91/184 (49%), Gaps = 39/184 (21%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IG  GE+G +G+ G+K   G  G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 802 LKGTQGEEGPIGPFGELGPRGKPGQK---GYAGEPGPEGLKGEVGDQGNIGKIGETGPVG 858

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
           +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 859 LPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG 918

Query: 213 RN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGING 257
                G  G  G DGL G+ GI G  G  G++G  GP            RG +GK G+ G
Sbjct: 919 SQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGERGPHGLIGKTGNPGERGFQGKPGLQG 978

Query: 258 VPGT 261
           +PG+
Sbjct: 979 LPGS 982



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 74/140 (52%), Gaps = 3/140 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G  G+ G  GA G  GVKG  G  G+PG+ GP G QG+PG  G +G +G  G  G 
Sbjct: 1317 PGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGD 1376

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG  GD G +G  G+ G     GL G  G PG  G +G  G  G+ G  G  G  G  G 
Sbjct: 1377 QGPCGDPGLKGQPGEYGV---QGLTGFQGFPGPKGPEGDAGIVGISGPKGPVGHRGNTGP 1433

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G  G  G TGPRG +G
Sbjct: 1434 LGREGIIGPTGRTGPRGEKG 1453



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 99/249 (39%), Gaps = 75/249 (30%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           +   G+        P G  GP G +G IG+ GE G  G  GE+G PG+ G  G    QG 
Sbjct: 593 IGSPGYPGRQGLAGPEGNPGPKGARGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGF 652

Query: 154 PGDEGKRGPKGDMGYPG------------------------PQGIPG------------- 176
           PGD G RGP G  G PG                        P GIPG             
Sbjct: 653 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGI 712

Query: 177 --DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------------- 217
             D+G++G  G++G PG  G  G  GLPG PG+ G PG +G                   
Sbjct: 713 KGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGPSGPPGPEGF 772

Query: 218 ----GIPGKDGLPGKDGIPGT---------NGTNGEKGMTGPRGN---RGKSGINGVPGT 261
               GIPG++G  G  G+ G           GT GE+G  GP G    RGK G  G  G 
Sbjct: 773 PGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGE 832

Query: 262 PAICAYKRE 270
           P     K E
Sbjct: 833 PGPEGLKGE 841



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 88/182 (48%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
           GL G  G KGE G  GE+G  G  G+KGA G+ GPPG +G PG  G+ G           
Sbjct: 708 GLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGPSGPP 767

Query: 162 ----PKGDMGYPG---PQG---------------IPGDEGKRGPKGDMGYPGRIGLDGRD 199
                 GD+G PG   P+G               + G +G+ GP G  G  G  G  G+ 
Sbjct: 768 GPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQK 827

Query: 200 GLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  GEPG +G+ G  G  G  GK       GLPG+ G+ G+ G  GE+G  GP G +G+ 
Sbjct: 828 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEK 887

Query: 254 GI 255
           G+
Sbjct: 888 GV 889



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 9/113 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY 168
            PG+QGP   KGE G  G+ G++G+RG +GA G  GP   PG +G PG+ G +G  G  G+
Sbjct: 1347 PGIQGP---KGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGF 1403

Query: 169  PGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            PGP+G  GD    G  GPKG +G+ G  G  GR+G+ G  G  G  G  G  G
Sbjct: 1404 PGPKGPEGDAGIVGISGPKGPVGHRGNTGPLGREGIIGPTGRTGPRGEKGFRG 1456



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 91/231 (39%), Gaps = 63/231 (27%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK------------------GA 141
           QG      E   PG +G +G  G  G +G+ G  G+ G+                   G 
Sbjct: 719 QGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGPSGPPGPEGFPGDIGI 778

Query: 142 PGVVGPPGPQGIPGD------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           PG  GP GP+G+ G+            +G+ GP G  G  GP+G PG +G  G  G  G 
Sbjct: 779 PGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGEPGPEGL 838

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------ 243
            G +G  G  G  GE G  G+PG  GM G  G+ G   + G PG  G  GEKG+      
Sbjct: 839 KGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKG---ERGSPGPLGPQGEKGVMGYPGP 895

Query: 244 ------------------------TGPRGNRGKSGINGVPGTPAICAYKRE 270
                                    GP+G RG  G +G+ G   I   K E
Sbjct: 896 PGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGE 946


>gi|449662842|ref|XP_002153884.2| PREDICTED: collagen alpha-1(V) chain-like [Hydra magnipapillata]
          Length = 688

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/190 (40%), Positives = 101/190 (53%), Gaps = 36/190 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------ 149
           L  + G         PPG+QG  G+KG+ G  G  G  G  GE GA G +GPPG      
Sbjct: 160 LPGISGISGEKGNMGPPGIQGVSGEKGDKGLPGTHGANGMPGEPGAKGPIGPPGQKGEAG 219

Query: 150 ------------PQGIPGDEGKRGPKGDMGYP---------GPQGIPGDEGKRGPKGDMG 188
                        +G PG  GK+G  G  G P         GPQG+PG++G+   KG+ G
Sbjct: 220 KLGYKGEKGLTGEKGQPGLNGKKGNDGPAGAPSIDGLPGSTGPQGLPGNDGE---KGEKG 276

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PGR G+DG++G PG PGL+G+P      G+ G+ G PGKDGIPG+ G  GE G+ GP G
Sbjct: 277 SPGRNGIDGKNGSPGAPGLEGLP------GLKGEPGQPGKDGIPGSIGPPGETGLMGPPG 330

Query: 249 NRGKSGINGV 258
            +G+ G  G+
Sbjct: 331 QKGEVGKQGL 340



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 95/176 (53%), Gaps = 7/176 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  G+KG +G  G  GV GE+G+KG PG  G     G+PG+ G +GP G  G  G 
Sbjct: 161 PGISGISGEKGNMGPPGIQGVSGEKGDKGLPGTHGA---NGMPGEPGAKGPIGPPGQKGE 217

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G  G +G++G  G+ G PG  G  G DG  G P +DG+PG  G  G+PG DG  G+ G 
Sbjct: 218 AGKLGYKGEKGLTGEKGQPGLNGKKGNDGPAGAPSIDGLPGSTGPQGLPGNDGEKGEKGS 277

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPP 287
           PG NG +G+ G  G  G  G  G+ G PG P          S+ P  ET  L+ PP
Sbjct: 278 PGRNGIDGKNGSPGAPGLEGLPGLKGEPGQPGKDGI---PGSIGPPGETG-LMGPP 329



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 90/162 (55%), Gaps = 9/162 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  G+ GE G +GE G+ G  G++G PG  GPPG  G+PG++G     G+ G PG  
Sbjct: 84  GLPGTPGKDGEQGEQGEPGLIGSIGQRGFPGAAGPPGSNGLPGEQGL---PGNNGLPGKD 140

Query: 173 GIPGDEGKRGPKGDM---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLP 226
           GIPG  GK+G KG     G PG  G+ G  G  G PG+ G+ G  G  G+P   G +G+P
Sbjct: 141 GIPGQPGKQGDKGQQGPPGLPGISGISGEKGNMGPPGIQGVSGEKGDKGLPGTHGANGMP 200

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+ G  G  G  G+KG  G  G +G+ G+ G  G P +   K
Sbjct: 201 GEPGAKGPIGPPGQKGEAGKLGYKGEKGLTGEKGQPGLNGKK 242



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/162 (43%), Positives = 87/162 (53%), Gaps = 6/162 (3%)

Query: 112 PGLQGPIG---QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GPIG   +KG+ G  G  G  GE+GE+G PG++G  G +G PG     GP G  G 
Sbjct: 68  PGSDGPIGVDGEKGDNGLPGTPGKDGEQGEQGEPGLIGSIGQRGFPG---AAGPPGSNGL 124

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG QG+PG+ G  G  G  G PG+ G  G+ G PG PG+ GI G  G  G PG  G+ G+
Sbjct: 125 PGEQGLPGNNGLPGKDGIPGQPGKQGDKGQQGPPGLPGISGISGEKGNMGPPGIQGVSGE 184

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G  G  GT+G  GM G  G +G  G  G  G      YK E
Sbjct: 185 KGDKGLPGTHGANGMPGEPGAKGPIGPPGQKGEAGKLGYKGE 226



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/163 (47%), Positives = 89/163 (54%), Gaps = 12/163 (7%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E   PGL G IGQ+G  GA G  G  G  GE+G PG  G PG  GIPG  GK+   GD G
Sbjct: 97  EQGEPGLIGSIGQRGFPGAAGPPGSNGLPGEQGLPGNNGLPGKDGIPGQPGKQ---GDKG 153

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---G 224
             GP G+PG  G  G KG+MG PG  G+ G     G+ GL G  G NGM G PG     G
Sbjct: 154 QQGPPGLPGISGISGEKGNMGPPGIQGVSGEK---GDKGLPGTHGANGMPGEPGAKGPIG 210

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPGTPAI 264
            PG+ G  G  G  GEKG+TG +G     GK G +G  G P+I
Sbjct: 211 PPGQKGEAGKLGYKGEKGLTGEKGQPGLNGKKGNDGPAGAPSI 253



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/156 (44%), Positives = 84/156 (53%), Gaps = 9/156 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  GQ+G  G  G  G+ GE+G       +GPPG QG+ G++G +G  G  G  G 
Sbjct: 146 PGKQGDKGQQGPPGLPGISGISGEKGN------MGPPGIQGVSGEKGDKGLPGTHGANGM 199

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGK 228
            G PG +G  GP G  G  G++G  G  GL GE   PGL+G  G +G  G P  DGLPG 
Sbjct: 200 PGEPGAKGPIGPPGQKGEAGKLGYKGEKGLTGEKGQPGLNGKKGNDGPAGAPSIDGLPGS 259

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G +GEKG  G  G  G  G NG PG P +
Sbjct: 260 TGPQGLPGNDGEKGEKGSPGRNGIDGKNGSPGAPGL 295



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/140 (47%), Positives = 85/140 (60%), Gaps = 9/140 (6%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KG+ G  G+ G  G++G KGA GV+G PG  G  G +G+   KGD G PG    PG +G+
Sbjct: 41  KGDRGVPGQPGEVGDKGNKGAMGVMGLPGSDGPIGVDGE---KGDNGLPG---TPGKDGE 94

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           +G +G+ G  G IG  G  G  G PG +G+PG  G+   PG +GLPGKDGIPG  G  G+
Sbjct: 95  QGEQGEPGLIGSIGQRGFPGAAGPPGSNGLPGEQGL---PGNNGLPGKDGIPGQPGKQGD 151

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G SGI+G  G
Sbjct: 152 KGQQGPPGLPGISGISGEKG 171



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 85/162 (52%), Gaps = 15/162 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           PG  G +G KG  GA G MG         V GE+G+ G PG  G  G QG  G+ G  G 
Sbjct: 47  PGQPGEVGDKGNKGAMGVMGLPGSDGPIGVDGEKGDNGLPGTPGKDGEQGEQGEPGLIGS 106

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            G  G+PG  G PG  G     G+ G PG  GL G+DG+PG+PG  G  G+ G  G+PG 
Sbjct: 107 IGQRGFPGAAGPPGSNGL---PGEQGLPGNNGLPGKDGIPGQPGKQGDKGQQGPPGLPGI 163

Query: 223 DGLPGKDG---IPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+ G+ G    PG  G +GEKG  G  G  G +G+ G PG 
Sbjct: 164 SGISGEKGNMGPPGIQGVSGEKGDKGLPGTHGANGMPGEPGA 205



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 91/184 (49%), Gaps = 24/184 (13%)

Query: 105 STKEYCPPGLQGPIGQKGEIGAKG---------EMGVKGERGEKGAPGVVGPPGPQGIPG 155
           S   + P G  G  G  G++G +G           G+KG+RG  G PG VG         
Sbjct: 4   SINAFGPKGAPGKPGLSGDVGIQGIQGPPGAPGLPGIKGDRGVPGQPGEVG--------- 54

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D+G +G  G MG PG  G  G +G+   KGD G PG  G DG  G  GEPGL G  G+ G
Sbjct: 55  DKGNKGAMGVMGLPGSDGPIGVDGE---KGDNGLPGTPGKDGEQGEQGEPGLIGSIGQRG 111

Query: 216 MDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
             G    PG +GLPG+ G+PG NG  G+ G+ G  G +G  G  G PG P I     E  
Sbjct: 112 FPGAAGPPGSNGLPGEQGLPGNNGLPGKDGIPGQPGKQGDKGQQGPPGLPGISGISGEKG 171

Query: 273 SLLP 276
           ++ P
Sbjct: 172 NMGP 175



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 93/178 (52%), Gaps = 21/178 (11%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P GL G  G+KGE G+ G  G+ G+ G  GAPG+ G PG +G PG  GK G  G +G PG
Sbjct: 262 PQGLPGNDGEKGEKGSPGRNGIDGKNGSPGAPGLEGLPGLKGEPGQPGKDGIPGSIGPPG 321

Query: 171 PQGIPGDEGKRGPKGDMGYP----------------GRIGLDGRD--GLPGEPGLDGIPG 212
             G+ G  G++G  G  G P                 ++ L   D  G  G    DG+ G
Sbjct: 322 ETGLMGPPGQKGEVGKQGLPGFLGPRGPPGPIGKCLSQVDLKSSDKQGQQGNKDDDGLHG 381

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---TGPRGNRGKSGINGVPGTPAICAY 267
             G+ G+ G  G+PG  GI G +G  GE+G+    G +GNRG SG+ G+PG PA  A+
Sbjct: 382 PQGLPGLKGNKGIPGDAGIRGLSGRTGEQGLPGVKGEKGNRGNSGMKGIPGPPAAPAH 439


>gi|32364065|gb|AAP80185.1| alpha 1 type XXIV collagen precursor [Homo sapiens]
          Length = 1714

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/158 (47%), Positives = 93/158 (58%), Gaps = 6/158 (3%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGD 165
            PGL+G  GQ+G   E G +GE G+KGERG +G  G  G PGP    GIPG +G  GPKG 
Sbjct: 1233 PGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGI 1292

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GY G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+ G PG  G 
Sbjct: 1293 QGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGP 1352

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ G+PG  G  G++G  G +G++G  G  G+ G P 
Sbjct: 1353 KGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPG 1390



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/169 (44%), Positives = 99/169 (58%), Gaps = 15/169 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGP---QGIPGDEGKRGPK 163
            G+QG  G+KG+ G +G  G+       GERG +G PG+ G PG    +G+PG+ G RG +
Sbjct: 939  GIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQ 998

Query: 164  GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GD+G PG  G+   PG EG+ G +G+ G  G +G  G  G  GEPGL G PG  G +G+ 
Sbjct: 999  GDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQ 1058

Query: 221  GKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            GKDGL   PG  G+PG +G  GE G+ G  G  G+SG  G+PG   I  
Sbjct: 1059 GKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVG 1107



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 91/189 (48%), Gaps = 27/189 (14%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            V  QG      E  P GL G +G  G IG KGE G  G  G +G  GV+           
Sbjct: 842  VGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGP 901

Query: 146  -------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                         GPPG QG  G  G RGP G +G  G QG  G++G +G +G  G  G+
Sbjct: 902  IGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGK 961

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G  G  G  G+PGL G+PG  G  G+PG+   PG  G+ G  G  GE GM GP G  G+
Sbjct: 962  TGNPGERGFQGKPGLQGLPGSTGDRGLPGE---PGLRGLQGDVGPPGEMGMEGPPGTEGE 1018

Query: 253  SGINGVPGT 261
            SG+ G PG 
Sbjct: 1019 SGLQGEPGA 1027



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 92/182 (50%), Gaps = 12/182 (6%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG   ST +   PG  G  G +G++G  GEMG++G  G +G  G+ G PG +G  G  
Sbjct: 975  GLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTA 1034

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------- 210
            G  G  G+ G  G  G PG+EG +G  G  G PG  GL G DG  GE GL GI       
Sbjct: 1035 GSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRS 1094

Query: 211  -----PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                 PG  G+ GIPG+ G PGK G  G  G  GE G  GP G  GKSG  G  GT    
Sbjct: 1095 GQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAV 1154

Query: 266  AY 267
             +
Sbjct: 1155 GH 1156



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 92/180 (51%), Gaps = 27/180 (15%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +GV G RG   ++G PG  G  G QG+ G+ G  G KG  G PGP
Sbjct: 1215 QGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGP 1274

Query: 172  QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G   IPG +G  GPKG  GY         PG+IG  G+ GL   PG+ G PGR G+ G 
Sbjct: 1275 SGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGL---PGIRGGPGRTGLAGA 1331

Query: 220  PGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G+ G  G+PG+ G  G K         G+ G RG+RG  G  G  G P +     E
Sbjct: 1332 PGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGE 1391



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 94/206 (45%), Gaps = 51/206 (24%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------- 143
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG             
Sbjct: 1230 VGVPGLRGATGQQGPPGEPG---DQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGL 1286

Query: 144  --------------------VVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGD 177
                                 +GPPG QG+PG  G  G  G  G PGP       G+PG 
Sbjct: 1287 LGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGS 1346

Query: 178  EGKRGPKGDMGYPGRIGLDGR---------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             G +GPKG+ G PG+ G+ G+          G  G+PGL G PG  G+ G+ G  G PG 
Sbjct: 1347 PGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGP 1406

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G  G  G  GP G+RG +G
Sbjct: 1407 KGPEGDAGIVGISGPKGPIGHRGNTG 1432



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 94/189 (49%), Gaps = 16/189 (8%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM-------------GVKGERGEKGAPGV 144
             + G+     +  P GL GP G+KG  G    +             G +GERGE GA G 
Sbjct: 1167 GIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGY 1226

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             G  G  G+ G  G++GP G+ G  G QG+ G+ G  G KG  G PG  G  G  GL G 
Sbjct: 1227 KGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGL 1286

Query: 205  PGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  GI G +G DGI   PGK G PGK G+PG  G  G  G+ G  G  G  G +G+PG+
Sbjct: 1287 LGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGS 1346

Query: 262  PAICAYKRE 270
            P I   K E
Sbjct: 1347 PGIQGPKGE 1355



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 83/149 (55%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G      V GE+G++G  G++GPPG QG   D+G +G  G  G PG 
Sbjct: 527 PGLPGPKGPKGDPGFSPGQSVPGEKGDQGLSGLMGPPGMQG---DKGLKGHPGLPGLPGE 583

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QGIPG  G     G  GYPGR GL G +G PG  G  G  G  G  G  G +G  G  GI
Sbjct: 584 QGIPGFAGN---IGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGI 640

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G +G  G  G+RG +G++G PG
Sbjct: 641 RGKKGFKGRQGFPGDFGDRGPAGLDGSPG 669



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 92/192 (47%), Gaps = 33/192 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +G+ G KG  G+ G  GE+G PG  G  G  G PG +G  GP+G+ G  G Q
Sbjct: 558 GLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQ 617

Query: 173 GI---PGDEGKRGPKGDMGYP---GRIGLDGRDGLPGE------PGLDGIPG-------- 212
           G    PG+ G+ GP+G+ G P   G+ G  GR G PG+       GLDG PG        
Sbjct: 618 GFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPP 677

Query: 213 -----RN--------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                R         G  GIPG  GL G  G+PG  G  GE+G  G  G  G SG  G  
Sbjct: 678 GFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYSGDKGAV 737

Query: 260 GTPAICAYKRES 271
           G P     + +S
Sbjct: 738 GLPGPPGMRGKS 749



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 96/207 (46%), Gaps = 46/207 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGI---PGDEGKR 160
            GLQG  G KG  G +G  G  GE+GE G PG++GP         PGP+GI   PG  G+ 
Sbjct: 1056 GLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRP 1115

Query: 161  GPKGDMGYPGP------QGIPGDEGKRGPK------GDMGYPGRIGLDGRDGLPGEPGLD 208
            G KGD G  GP      +G PG  GK GPK      G +G+ G +G DG  G+PG  G  
Sbjct: 1116 GKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQ 1175

Query: 209  GIPGRNGMDGIPGKDGLPGKD----------------------GIPGTNGTNGEKGMTGP 246
            G PG +G+ G  G+ G PG+D                      G PG  G  G  G+ G 
Sbjct: 1176 GQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGL 1235

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCS 273
            RG  G+ G  G PG       K E  S
Sbjct: 1236 RGATGQQGPPGEPGDQGEQGLKGERGS 1262



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 96/184 (52%), Gaps = 24/184 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPG---------VVGPPGPQGIPGDEGKR 160
            GLQG  G KG++G  G +G  GE   RGE GAPG         + G PG +G+PG++G+ 
Sbjct: 1020 GLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGE- 1078

Query: 161  GPKGDMGYP---------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
              KG+MG P         G  G+PG EG  G  G  G PG+ G  G+ G  GE G  G P
Sbjct: 1079 --KGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPP 1136

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G+ G  G  G  G  G  G  G  G +GE G+ G RG++G+ G +G+PG      Y  E 
Sbjct: 1137 GKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGED 1196

Query: 272  CSLL 275
             ++L
Sbjct: 1197 STVL 1200



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 82/167 (49%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V   G    T E   PGL+G  G  GE G +G+ G+KG  G +G PG  G  G  G+PG 
Sbjct: 1031 VGTAGSVGGTGE---PGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGI 1087

Query: 157  EGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G  G  G  G PGP+   GIPG  G+ G KGD G  G  G  G  G PG+ G  G  G 
Sbjct: 1088 IGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGA 1147

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  GL G DG PG  G  G +G  GP G  G  G  G PG
Sbjct: 1148 RGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPG 1194



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 72/132 (54%), Gaps = 12/132 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG--- 194
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q +PG++G +G  G MG PG  G   
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQSVPGEKGDQGLSGLMGPPGMQGDKG 570

Query: 195 LDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTN------GEKGMTG 245
           L G  GLPG PG  GIPG     G  G PG+ GL G +G PG  G        GE G  G
Sbjct: 571 LKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLG 630

Query: 246 PRGNRGKSGING 257
           P G RG  GI G
Sbjct: 631 PEGERGIPGIRG 642



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 88/192 (45%), Gaps = 27/192 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   QG       +   G +G  GQKG  G  G  G+KGE G++G  G +G  GP G+PG
Sbjct: 802 LKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPG 861

Query: 156 D---EGKRGPKGDMGYPGPQG------------------------IPGDEGKRGPKGDMG 188
           +    G  G KG+ G PGP G                        +PG  G RGP G  G
Sbjct: 862 EVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQG 921

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+ G  G DGL GE G+ G  G  G  G  G  GL GK G PG  G  G+ G+ G  G
Sbjct: 922 PKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPG 981

Query: 249 NRGKSGINGVPG 260
           + G  G+ G PG
Sbjct: 982 STGDRGLPGEPG 993



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 92/184 (50%), Gaps = 39/184 (21%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IGA GE+G +G+ G+KG     G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 802 LKGTQGEEGPIGAFGELGPRGKPGQKG---YAGEPGPEGLKGEVGDQGNIGKIGETGPVG 858

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
           +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 859 LPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG 918

Query: 213 RN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGING 257
                G  G  G DGL G+ GI G  G  G++G  GP            RG +GK G+ G
Sbjct: 919 SQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQG 978

Query: 258 VPGT 261
           +PG+
Sbjct: 979 LPGS 982



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 89/198 (44%), Gaps = 25/198 (12%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQG 152
            ++   G    T    P G+ G  GQ+G  G    KG++G  GE G +G PG +G  GP+G
Sbjct: 1087 IIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKG 1146

Query: 153  IPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGPKGDMGYPGR----------- 192
              G  G  G  G M         GY G QG PG  G  GPKG+ GYPG            
Sbjct: 1147 ARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPR 1206

Query: 193  --IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
               G  G  G  GEPG +G  G  G+ G+ G  G  G  G PG  G  G KG  G  GN+
Sbjct: 1207 GEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNK 1266

Query: 251  GKSGINGVPGTPAICAYK 268
            GK G  G  G P I   +
Sbjct: 1267 GKKGAPGPSGKPGIPGLQ 1284



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 74/140 (52%), Gaps = 3/140 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G  G+ G  GA G  GVKG  G  G+PG+ GP G QG+PG  G +G +G  G  G 
Sbjct: 1317 PGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGD 1376

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG  GD G +G  G+ G     GL G  G PG  G +G  G  G+ G  G  G  G  G 
Sbjct: 1377 QGPCGDPGLKGQPGEYGV---QGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGP 1433

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G  G  G TGPRG +G
Sbjct: 1434 LGREGIIGPTGRTGPRGEKG 1453



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 105/268 (39%), Gaps = 78/268 (29%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           +   G+        P G  GP G +G IG+ GE G  G  GE+G PG+ G  G    QG 
Sbjct: 593 IGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGF 652

Query: 154 PGDEGKRGPKGDMGYPG------------------------PQGIPG------------- 176
           PGD G RGP G  G PG                        P GIPG             
Sbjct: 653 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGI 712

Query: 177 --DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------------- 217
             D+G++G  G++G PG  G  G  GLPG PG+ G  G +G                   
Sbjct: 713 KGDKGEQGTAGELGEPGYSGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGF 772

Query: 218 ----GIPGKDGLPGKDGIPGT---------NGTNGEK------GMTGPRGNRGKSGINGV 258
               GIPG++G  G  G+ G           GT GE+      G  GPRG  G+ G  G 
Sbjct: 773 PGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGE 832

Query: 259 PGTPAICAYKRESCSLLPNSETSQLLIP 286
           PG   +     +  ++    ET  + +P
Sbjct: 833 PGPEGLKGEVGDQGNIGKIGETGPVGLP 860



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 84/180 (46%), Gaps = 33/180 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G KG +G +G  G   +KG +GE+G  G  G  GP+G PG       KG  G 
Sbjct: 779 PGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQ------KGYAGE 832

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP+G+      +G  GD G  G+IG  G  GLPGE G+ G  G  G  G PG  G  G+
Sbjct: 833 PGPEGL------KGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGE 886

Query: 229 DGI------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+                  PG  G  G  G  GP+G RG  G +G+ G   I   K E
Sbjct: 887 KGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGE 946



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 9/113 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY 168
            PG+QGP   KGE G  G+ G++G+RG +GA G  GP   PG +G PG+ G +G  G  G+
Sbjct: 1347 PGIQGP---KGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGF 1403

Query: 169  PGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            PGP+G  GD    G  GPKG +G+ G  G  GR+G+ G  G  G  G  G  G
Sbjct: 1404 PGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGEKGFRG 1456



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 88/182 (48%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-------------------- 152
           GL G  G KGE G  GE+G  G  G+KGA G+ GPPG +G                    
Sbjct: 708 GLPGIKGDKGEQGTAGELGEPGYSGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPP 767

Query: 153 ----------IPGDEGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                     IPG  G  GPKG +G    PGP G+ G +G+ GP G  G  G  G  G+ 
Sbjct: 768 GPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQK 827

Query: 200 GLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  GEPG +G+ G  G  G  GK       GLPG+ G+ G+ G  GE+G  GP G +G+ 
Sbjct: 828 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEK 887

Query: 254 GI 255
           G+
Sbjct: 888 GV 889



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            G QGP G  G  G  GE GV+G  G +G PG  GP G  GI G  G +GP G  G  GP 
Sbjct: 1375 GDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPL 1434

Query: 172  --QGIPGDEGKRGPKGDMGYPGR 192
              +GI G  G+ GP+G+ G+ G 
Sbjct: 1435 GREGIIGPTGRTGPRGEKGFRGE 1457


>gi|296204971|ref|XP_002749572.1| PREDICTED: macrophage receptor MARCO [Callithrix jacchus]
          Length = 519

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 101/200 (50%), Gaps = 21/200 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD GK GP       
Sbjct: 234 GLIGPKGETGAKGDKGDLGLPGGKGDRGMKGDAGVMGPPGAQGSKGDSGKPGPPGLAGFP 293

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
             KGD G PG QG+PG  G  G  G  G PG  G  G  GLPG P   G PG  G+ G  
Sbjct: 294 GAKGDQGQPGVQGVPGPPGAVGRPGAKGEPGSAGSPGLTGLPGSP---GSPGAAGLKGSK 350

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS------L 274
           G  GL G+ G  G +G  G  G+ G RG+RG +G  G PG       K E  S       
Sbjct: 351 GDTGLQGQQGSKGESGVPGPAGVKGERGSRGLAGPKGAPGRAGQKGDKGEKGSPGEQGEK 410

Query: 275 LPNSETSQLLIPPTIVGSEH 294
               E   + +P  IVGS +
Sbjct: 411 GAKGEKGDIPLPVRIVGSRN 430



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/180 (46%), Positives = 98/180 (54%), Gaps = 19/180 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +GE+G KG  G++GP G  G         +PG +G RG K
Sbjct: 204 GLQGPQGTPGKQGATGTPGPQGEKGSKGNGGLIGPKGETGAKGDKGDLGLPGGKGDRGMK 263

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRN--- 214
           GD   MG PG QG  GD GK GP G  G+PG  G  G+    G+PG PG  G PG     
Sbjct: 264 GDAGVMGPPGAQGSKGDSGKPGPPGLAGFPGAKGDQGQPGVQGVPGPPGAVGRPGAKGEP 323

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G PG  GLPG  G PG  G  G KG TG +G +G  G +GVPG PA    +R S  L
Sbjct: 324 GSAGSPGLTGLPGSPGSPGAAGLKGSKGDTGLQGQQGSKGESGVPG-PAGVKGERGSRGL 382



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 76/150 (50%), Gaps = 3/150 (2%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G+ G  G  G  G +G++G PGV G PGP G  G  G +G  G  G PG
Sbjct: 271 PPGAQGSKGDSGKPGPPGLAGFPGAKGDQGQPGVQGVPGPPGAVGRPGAKGEPGSAGSPG 330

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
             G+PG  G  G  G  G  G  GL G+ G  GE    G+PG  G+ G  G  GL G  G
Sbjct: 331 LTGLPGSPGSPGAAGLKGSKGDTGLQGQQGSKGE---SGVPGPAGVKGERGSRGLAGPKG 387

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG  G  G+KG  G  G +G+ G  G  G
Sbjct: 388 APGRAGQKGDKGEKGSPGEQGEKGAKGEKG 417



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 91/209 (43%), Gaps = 59/209 (28%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP--------------------------- 148
           G  G KGE G  G  G+KG+ G  GAPG+ G P                           
Sbjct: 142 GMFGIKGERGVPGLQGLKGDMGMPGAPGLPGRPAEKGAKGAAGHNGATGPRGPQGPPGVK 201

Query: 149 -----GPQGIPGD---------EGKRGPKGDMGYPGPQ------------GIPGDEGKRG 182
                GPQG PG          +G++G KG+ G  GP+            G+PG +G RG
Sbjct: 202 GVGLQGPQGTPGKQGATGTPGPQGEKGSKGNGGLIGPKGETGAKGDKGDLGLPGGKGDRG 261

Query: 183 PKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            KGD   MG PG  G  G  G PG PGL G PG  G  G PG  G+PG    PG  G  G
Sbjct: 262 MKGDAGVMGPPGAQGSKGDSGKPGPPGLAGFPGAKGDQGQPGVQGVPGP---PGAVGRPG 318

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            KG  G  G+ G +G+ G PG+P     K
Sbjct: 319 AKGEPGSAGSPGLTGLPGSPGSPGAAGLK 347



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 71/143 (49%), Gaps = 12/143 (8%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + GF  +  +   PG+QG  G  G +   G  G KGE G  G+PG+ G PG  G PG  
Sbjct: 288 GLAGFPGAKGDQGQPGVQGVPGPPGAV---GRPGAKGEPGSAGSPGLTGLPGSPGSPGAA 344

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G +G KGD G          +G++G KG+ G PG  G+ G  G  G  G  G PGR G  
Sbjct: 345 GLKGSKGDTGL---------QGQQGSKGESGVPGPAGVKGERGSRGLAGPKGAPGRAGQK 395

Query: 218 GIPGKDGLPGKDGIPGTNGTNGE 240
           G  G+ G PG+ G  G  G  G+
Sbjct: 396 GDKGEKGSPGEQGEKGAKGEKGD 418



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 70/144 (48%), Gaps = 17/144 (11%)

Query: 142 PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR--------- 192
           PG+ G  G +G+PG +G    KGDMG PG  G+PG   ++G KG  G+ G          
Sbjct: 141 PGMFGIKGERGVPGLQGL---KGDMGMPGAPGLPGRPAEKGAKGAAGHNGATGPRGPQGP 197

Query: 193 -----IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                +GL G  G PG+ G  G PG  G  G  G  GL G  G  G  G  G+ G+ G +
Sbjct: 198 PGVKGVGLQGPQGTPGKQGATGTPGPQGEKGSKGNGGLIGPKGETGAKGDKGDLGLPGGK 257

Query: 248 GNRGKSGINGVPGTPAICAYKRES 271
           G+RG  G  GV G P     K +S
Sbjct: 258 GDRGMKGDAGVMGPPGAQGSKGDS 281



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 43/106 (40%), Gaps = 17/106 (16%)

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK-------- 241
           PG  G+ G  G+   PGL G+ G  GM G PG  G P + G  G  G NG          
Sbjct: 141 PGMFGIKGERGV---PGLQGLKGDMGMPGAPGLPGRPAEKGAKGAAGHNGATGPRGPQGP 197

Query: 242 ------GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
                 G+ GP+G  GK G  G PG       K     + P  ET 
Sbjct: 198 PGVKGVGLQGPQGTPGKQGATGTPGPQGEKGSKGNGGLIGPKGETG 243


>gi|109009549|ref|XP_001109249.1| PREDICTED: collagen alpha-1(XXIV) chain-like isoform 2 [Macaca
            mulatta]
          Length = 1714

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 94/167 (56%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG   P G  GIPG 
Sbjct: 1230 VGVPGLRGATGQQGPPGEPG---DQGEQGLKGERGCEGHKGKKGAPG---PSGKAGIPGL 1283

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G  GPKG  GY G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+
Sbjct: 1284 QGLPGPKGIQGYHGADGILGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGL 1343

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G PG  G  G+ G+PG  G  G +G  G +G++G  G  G+ G P 
Sbjct: 1344 PGSPGIQGPKGEQGLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQPG 1390



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 105/194 (54%), Gaps = 9/194 (4%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+  QG   +  E    G +GP G  G+ G  GE GV+G+ G +G PG  G    +G+PG
Sbjct: 934  LLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQGKPGLQGLPGSTGD---RGLPG 990

Query: 156  DEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            + G RG +GD+G PG  GI   PG EG+ G +G+ G  G +G  G  G PGEPGL G PG
Sbjct: 991  EPGLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDVGPAGSVGEPGEPGLRGEPG 1050

Query: 213  RNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
              G +G+ GKDGL G     G+PG +G  G+ G+ G  G  G+SG  G+PG   I     
Sbjct: 1051 APGEEGLQGKDGLKGASGGRGLPGEDGEKGDMGLPGIIGPLGRSGQMGLPGPEGIVGIPG 1110

Query: 270  ESCSLLPNSETSQL 283
            +   L    +  Q+
Sbjct: 1111 QRGRLGKKGDKGQI 1124



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/159 (45%), Positives = 93/159 (58%), Gaps = 9/159 (5%)

Query: 111  PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKG 164
            PPG QGP GQ+G  G  G   E G++G +GEKG  G  GP G     G PG+ G +G  G
Sbjct: 916  PPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQGKPG 975

Query: 165  DMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
              G PG    +G+PG+ G RG +GD+G PG +G++G  G+ GE GL G PG  G  G  G
Sbjct: 976  LQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDVGPAG 1035

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G PG+ G+ G  G  GE+G+ G  G +G SG  G+PG
Sbjct: 1036 SVGEPGEPGLRGEPGAPGEEGLQGKDGLKGASGGRGLPG 1074



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 101/185 (54%), Gaps = 18/185 (9%)

Query: 96   LVAMQGFCNSTKEYC---PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L  +QG      E     PPG++G  G +GE GAKG++G  G  GE G PG+ G PG   
Sbjct: 994  LRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDVGPAGSVGEPGEPGLRGEPG--- 1050

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDG 209
             PG+EG +G  G  G  G +G+PG++G+   KGDMG PG IG  GR    GLPG  G+ G
Sbjct: 1051 APGEEGLQGKDGLKGASGGRGLPGEDGE---KGDMGLPGIIGPLGRSGQMGLPGPEGIVG 1107

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGTPA 263
            IPG+ G  G  G  G  G  G  G+ G+ G+ G +GP+G RG        G+ G  G P 
Sbjct: 1108 IPGQRGRLGKKGDKGQIGPTGEVGSRGSPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPG 1167

Query: 264  ICAYK 268
            I  Y+
Sbjct: 1168 IPGYR 1172



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 93/178 (52%), Gaps = 19/178 (10%)

Query: 112  PGLQGPIGQKGEIGAKGE----------------MGVKGERGEKGAPGVVGPPGPQGIPG 155
            PGL G  G KGE G  GE                +G +GERGE GA G  G  G  G+ G
Sbjct: 1178 PGLSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRG 1237

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
              G++GP G+ G  G QG+ G+ G  G KG  G PG  G  G  GL G PG  GI G +G
Sbjct: 1238 ATGQQGPPGEPGDQGEQGLKGERGCEGHKGKKGAPGPSGKAGIPGLQGLPGPKGIQGYHG 1297

Query: 216  MDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             DGI   PGK G PGK G+PG  G+ G  G+ G  G  G  G +G+PG+P I   K E
Sbjct: 1298 ADGILGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGE 1355



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 92/180 (51%), Gaps = 27/180 (15%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +GV G RG   ++G PG  G  G QG+ G+ G  G KG  G PGP
Sbjct: 1215 QGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGCEGHKGKKGAPGP 1274

Query: 172  QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G   IPG +G  GPKG  GY         PG++G  G+ GL   PG+ G PGR G+ G 
Sbjct: 1275 SGKAGIPGLQGLPGPKGIQGYHGADGILGNPGKVGPPGKQGL---PGIRGSPGRTGLAGA 1331

Query: 220  PGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G+ G  G+PG+ G  G K         G+ G RG+RG  G  G  G P +     E
Sbjct: 1332 PGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQPGE 1391



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 90/178 (50%), Gaps = 12/178 (6%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S  E   PGL+G  G  GE G +G+ G+KG  G +G PG  G  G  G+PG  G  
Sbjct: 1032 GPAGSVGEPGEPGLRGEPGAPGEEGLQGKDGLKGASGGRGLPGEDGEKGDMGLPGIIGPL 1091

Query: 161  GPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G  G MG PGP+   GIPG  G+ G KGD G  G  G  G  G PG+ G  G  G  G  
Sbjct: 1092 GRSGQMGLPGPEGIVGIPGQRGRLGKKGDKGQIGPTGEVGSRGSPGKIGKSGPKGARGTR 1151

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
            G  G  GL G D         GE G+ G RG++G+ G++G+PG      Y  E  ++L
Sbjct: 1152 GAVGHLGLMGPD---------GEPGIPGYRGHQGQPGLSGLPGPKGEKGYPGEDSTVL 1200



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 97/196 (49%), Gaps = 42/196 (21%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGE------------MGVKGERGEKGAPGVVGPPGPQGI-- 153
            E  P GL+G +G +G IG  GE             G  GE+GE+G+PG +GP G +G+  
Sbjct: 832  EPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGTTGSIGEKGERGSPGPLGPQGEKGVMG 891

Query: 154  ----------------PGDEGKR------GPKGDMGYPGPQGIPGD---EGKRGPKGDMG 188
                            PG  G R      GPKG  G  GP G+ G+   +G +G KGD G
Sbjct: 892  YPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQG 951

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTG 245
              G  GL G+ G PGE G+ G PG  G+ G  G  GLPG+ G+ G     G  GE G+ G
Sbjct: 952  KRGPHGLIGKTGNPGERGVQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGIEG 1011

Query: 246  PRGNRGKSGINGVPGT 261
            P G  G+SG+ G PG 
Sbjct: 1012 PPGIEGESGLQGEPGA 1027



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 89/187 (47%), Gaps = 39/187 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGDM 166
           GL GP G +G+ G KG  G+ G RGE+G PG  G       PG QG+ G EG  GPKG  
Sbjct: 558 GLMGPPGMQGDKGLKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGHPGPKGAR 617

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGE------PGLDGIPG----- 212
           G+    G PG+ G+ GP+G+ G P   G+ G  GR G PG+       GLDG PG     
Sbjct: 618 GF---IGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGT 674

Query: 213 --------RN--------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                   R         G  GIPG  GL G  G+PG  G  GE+G  G  G  G  G  
Sbjct: 675 GPPGFPGLRGSVGPVGPIGPAGIPGPVGLSGNKGLPGIKGDKGEQGSAGELGEPGYPGDK 734

Query: 257 GVPGTPA 263
           G  G P 
Sbjct: 735 GAVGLPG 741



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 89/164 (54%), Gaps = 12/164 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQG  G  G+ G  GE G++G +G+ G PG +G  GP GI G+ G +G  G  G  GP
Sbjct: 974  PGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDVGP 1033

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIP-------- 220
             G  G+ G+ G +G+ G PG  GL G+DGL G  G  G+PG +G     G+P        
Sbjct: 1034 AGSVGEPGEPGLRGEPGAPGEEGLQGKDGLKGASGGRGLPGEDGEKGDMGLPGIIGPLGR 1093

Query: 221  -GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ GLPG +GI G  G  G  G  G +G  G +G  G  G+P 
Sbjct: 1094 SGQMGLPGPEGIVGIPGQRGRLGKKGDKGQIGPTGEVGSRGSPG 1137



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 95/212 (44%), Gaps = 45/212 (21%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            V  QG      E  P GL G +G  G IG KGE G  G  G +G  GV+           
Sbjct: 842  VGDQGNIGKIGETGPVGLPGEVGTTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGP 901

Query: 146  -------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG---DEGKRGPKGDMGY 189
                         GPPG QG  G  G RGP G +G  G QG  G   D+GKRGP G +G 
Sbjct: 902  IGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGK 961

Query: 190  ---PGRIGLDGR------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
               PG  G+ G+             GLPGEPGL G+ G  G  G  G +G PG +G  G 
Sbjct: 962  TGNPGERGVQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGIEGPPGIEGESGL 1021

Query: 235  NGTNGEKGMTGPRGN---RGKSGINGVPGTPA 263
             G  G KG  GP G+    G+ G+ G PG P 
Sbjct: 1022 QGEPGAKGDVGPAGSVGEPGEPGLRGEPGAPG 1053



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 85/165 (51%), Gaps = 9/165 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------QGIPGDEGKRGPKGDM 166
            G  G +G  G++G  G+ G+ G RG  G  G+ G PGP       G+PG  G +GPKG+ 
Sbjct: 1297 GADGILGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQ 1356

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G PG  GI G  G RG +GD G  G  GL G+   PGE G+ G+ G  G  G  G +G  
Sbjct: 1357 GLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQ---PGEYGVQGLTGFQGFPGPKGPEGDA 1413

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  GI G  G  G++G TGP G  G  G  G  G      ++ E+
Sbjct: 1414 GIVGISGPKGPIGQRGNTGPLGREGIIGPTGRTGPRGEKGFRGET 1458



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 104/235 (44%), Gaps = 57/235 (24%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAK---------------GEMGVKGERGEKGAPGV 144
            +G    T E    G  G IG+ G  GA+               GE G+ G RG +G PG+
Sbjct: 1121 KGQIGPTGEVGSRGSPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGL 1180

Query: 145  VGPPGPQGIPG----------------------DEGKRGPKGDMGYPGPQGIP---GDEG 179
             G PGP+G  G                      ++G+RG  G  GY G  G+P   G  G
Sbjct: 1181 SGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRGATG 1240

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI-------- 231
            ++GP G+ G  G  GL G  G  G  G  G PG +G  GIPG  GLPG  GI        
Sbjct: 1241 QQGPPGEPGDQGEQGLKGERGCEGHKGKKGAPGPSGKAGIPGLQGLPGPKGIQGYHGADG 1300

Query: 232  ----PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
                PG  G  G++G+ G RG+ G++G+ G PG P +     +  S LP S   Q
Sbjct: 1301 ILGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGV-----KGSSGLPGSPGIQ 1350



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 75/140 (53%), Gaps = 6/140 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
           PGL GP G KG+ G      V GE+G++G  G++GPPG QG       PG  G RG +G 
Sbjct: 527 PGLPGPKGPKGDPGFSPGQAVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLRGEQGI 586

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G+ G  G PG  G++G  G  G+PG  G  G  G PGE G  G  G  G+ GI GK G 
Sbjct: 587 PGFAGNIGSPGYPGRQGLAGPEGHPGPKGARGFIGSPGEAGQLGPEGERGIPGIRGKKGF 646

Query: 226 PGKDGIPGTNGTNGEKGMTG 245
            G+ G PG  G  G  G+ G
Sbjct: 647 KGRQGFPGDFGDRGPAGLDG 666



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q +PG++G +G  G MG PG  G  G
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAVPGEKGDQGLSGLMGPPGMQGDKG 570

Query: 198 RDGLPGEPGL---DGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTN------GEKGMTG 245
             G PG PGL    GIPG     G  G PG+ GL G +G PG  G        GE G  G
Sbjct: 571 LKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGHPGPKGARGFIGSPGEAGQLG 630

Query: 246 PRGNRGKSGING 257
           P G RG  GI G
Sbjct: 631 PEGERGIPGIRG 642



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 81/148 (54%), Gaps = 9/148 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGD 165
            PG++G  G+ G  GA G  GVKG  G  G+PG+ GP G QG+PG        G RG +GD
Sbjct: 1317 PGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGTRGHRGAQGD 1376

Query: 166  M---GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
                G PG +G PG+ G +G  G  G+PG  G +G  G+ G  G  G  G+ G  G  G+
Sbjct: 1377 QGPCGEPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGQRGNTGPLGR 1436

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            +G+ G  G  G  G  G +G TGP+G R
Sbjct: 1437 EGIIGPTGRTGPRGEKGFRGETGPQGLR 1464



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 85/183 (46%), Gaps = 21/183 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L    G      E   PG  G IG  G  G +G  G +G  G KGA G +G PG  G  G
Sbjct: 571 LKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGHPGPKGARGFIGSPGEAGQLG 630

Query: 156 DEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------------------IG 194
            EG+R   G +G  G+ G QG PGD G RGP G  G PG                   +G
Sbjct: 631 PEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVG 690

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G+PG  GL G  G  G+ G  G+ G  G+ G PG  G  G  G+ GP+G RGK G
Sbjct: 691 PIGPAGIPGPVGLSGNKGLPGIKGDKGEQGSAGELGEPGYPGDKGAVGLPGPQGMRGKPG 750

Query: 255 ING 257
            +G
Sbjct: 751 PSG 753



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 91/184 (49%), Gaps = 39/184 (21%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IG  GE+G +G+ G+K   G  G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 802 LKGTQGEEGPIGPFGELGPRGKPGQK---GYAGEPGPEGLKGEVGDQGNIGKIGETGPVG 858

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
           +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 859 LPGEVGTTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG 918

Query: 213 RN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGING 257
                G  G  G DGL G+ GI G  G  G++G  GP            RG +GK G+ G
Sbjct: 919 SQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQGKPGLQG 978

Query: 258 VPGT 261
           +PG+
Sbjct: 979 LPGS 982



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 98/249 (39%), Gaps = 75/249 (30%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           +   G+        P G  GP G +G IG+ GE G  G  GE+G PG+ G  G    QG 
Sbjct: 593 IGSPGYPGRQGLAGPEGHPGPKGARGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGF 652

Query: 154 PGDEGKRGPKGDMGYPG------------------------PQGIPG------------- 176
           PGD G RGP G  G PG                        P GIPG             
Sbjct: 653 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPVGLSGNKGLPGI 712

Query: 177 --DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------------- 217
             D+G++G  G++G PG  G  G  GLPG  G+ G PG +G                   
Sbjct: 713 KGDKGEQGSAGELGEPGYPGDKGAVGLPGPQGMRGKPGPSGQTGDPGLQGPSGPPGPEGF 772

Query: 218 ----GIPGKDGLPGKDGIPGT---------NGTNGEKGMTGPRGN---RGKSGINGVPGT 261
               GIPG++G  G  G+ G           GT GE+G  GP G    RGK G  G  G 
Sbjct: 773 PGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGE 832

Query: 262 PAICAYKRE 270
           P     K E
Sbjct: 833 PGPEGLKGE 841



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 88/182 (48%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQG-------------- 152
           GL G  G KGE G+ GE+G  G  G+KGA G+ GP      PGP G              
Sbjct: 708 GLPGIKGDKGEQGSAGELGEPGYPGDKGAVGLPGPQGMRGKPGPSGQTGDPGLQGPSGPP 767

Query: 153 ----------IPGDEGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                     IPG  G  GPKG +G    PGP G+ G +G+ GP G  G  G  G  G+ 
Sbjct: 768 GPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQK 827

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  GEPG +G+ G  G  G  GK G      LPG+ G  G+ G  GE+G  GP G +G+ 
Sbjct: 828 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGTTGSIGEKGERGSPGPLGPQGEK 887

Query: 254 GI 255
           G+
Sbjct: 888 GV 889



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 66/133 (49%), Gaps = 21/133 (15%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPG 212
           KRGP+G  G  G  G+PG  G +GPKGD G+      PG  G  G  GL G PG+ G   
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAVPGEKGDQGLSGLMGPPGMQG--- 567

Query: 213 RNGMDGIPGKDGLPGKDGIP------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             G+ G PG  GL G+ GIP      G+ G  G +G+ GP G+ G  G  G  G+P    
Sbjct: 568 DKGLKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGHPGPKGARGFIGSPG--- 624

Query: 267 YKRESCSLLPNSE 279
              E+  L P  E
Sbjct: 625 ---EAGQLGPEGE 634



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 96/249 (38%), Gaps = 67/249 (26%)

Query: 86  VWLNAYSRIPLV----AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK-- 139
           V L+    +P +      QG      E   PG +G +G  G  G +G+ G  G+ G+   
Sbjct: 701 VGLSGNKGLPGIKGDKGEQGSAGELGEPGYPGDKGAVGLPGPQGMRGKPGPSGQTGDPGL 760

Query: 140 ----------------GAPGVVGPPGPQGIPGD------------EGKRGPKGDMGYPGP 171
                           G PG  GP GP+G+ G+            +G+ GP G  G  GP
Sbjct: 761 QGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGP 820

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G PG +G  G  G  G  G +G  G  G  GE G  G+PG  G  G  G+ G   + G 
Sbjct: 821 RGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGTTGSIGEKG---ERGS 877

Query: 232 PGTNGTNGEKGM------------------------------TGPRGNRGKSGINGVPGT 261
           PG  G  GEKG+                               GP+G RG  G +G+ G 
Sbjct: 878 PGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGE 937

Query: 262 PAICAYKRE 270
             I   K E
Sbjct: 938 QGIQGAKGE 946


>gi|296198462|ref|XP_002746713.1| PREDICTED: collagen alpha-1(XXI) chain isoform 1 [Callithrix
           jacchus]
          Length = 957

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 94/168 (55%), Gaps = 12/168 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
           PGL GP G+ G  G  G MG  G +GE G+PG  G  GP+G       PG +G  G KG+
Sbjct: 562 PGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGPRGEPGIPGFPGSQGLMGQKGE 621

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G PG QG  G  G  G  G  G PG+ G+ G  G  GEPG+ G+PG +G+ G PG  G 
Sbjct: 622 IGPPGQQGKKGAPGIPGLMGTNGSPGQPGMPGSKGSKGEPGIQGMPGASGLKGEPGAMGT 681

Query: 226 PGKD---GIPGTNGTNGEKGMTGPRGNRGKSGIN---GVPGTPAICAY 267
           PG+    G+PG  G  G+KG  G +G +G+ G N   G+PGT  I  +
Sbjct: 682 PGEPGYMGLPGIQGKQGDKGNQGEKGIQGQKGENGRQGIPGTQGIQGH 729



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/146 (47%), Positives = 81/146 (55%), Gaps = 9/146 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG +GQKGEIG        G++G+KGAPG+ G  G  G PG  G  G KG  G PG 
Sbjct: 610 PGSQGLMGQKGEIGP------PGQQGKKGAPGIPGLMGTNGSPGQPGMPGSKGSKGEPGI 663

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QG+PG  G +G  G MG PG     G  GLPG  G  G  G  G  GI G+ G  G+ GI
Sbjct: 664 QGMPGASGLKGEPGAMGTPGE---PGYMGLPGIQGKQGDKGNQGEKGIQGQKGENGRQGI 720

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGING 257
           PGT G  G  G  G RG +G+ GI G
Sbjct: 721 PGTQGIQGHHGAKGERGEKGEPGIRG 746



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 89/173 (51%), Gaps = 24/173 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  GQ G+ G +G  G  G  G +G  G  G PG +G PG +G +G +G  G+PG 
Sbjct: 466 PGYPGQPGQDGKPGHQGIAGTPGVPGTQGIQGARGLPGYKGEPGRDGNKGDRGLPGFPGL 525

Query: 172 QGIPGDEGKRGPKGDMGYPG------RIGLDGRDGLPGEPGLDGIPGRNGMDGI------ 219
            G+PG +G  G KGD G PG        G  G  G PG PG  G PGR+G DG+      
Sbjct: 526 HGMPGSKGDMGTKGDKGAPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGSPGF 585

Query: 220 ---------PGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                    PG+D   G PG  G PG+ G  G+KG  GP G +GK G  G+PG
Sbjct: 586 KGEAGSPGAPGQDGPRGEPGIPGFPGSQGLMGQKGEIGPPGQQGKKGAPGIPG 638



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 89/169 (52%), Gaps = 18/169 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGVVGPPGPQGIPGDEGKR 160
           GL G  G  G  G+KG+MG KG++G  G              G  G PGP G PG  GK 
Sbjct: 518 GLPGFPGLHGMPGSKGDMGTKGDKGAPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKD 577

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G  G+ G  G PG  G+ GP+G+    G+PG  GL G+ G  G PG  G  G  G+ 
Sbjct: 578 GLMGSPGFKGEAGSPGAPGQDGPRGEPGIPGFPGSQGLMGQKGEIGPPGQQGKKGAPGIP 637

Query: 218 GIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPA 263
           G+ G +G PG+ G+PG+ G+ GE   +GM G  G +G+ G  G PG P 
Sbjct: 638 GLMGTNGSPGQPGMPGSKGSKGEPGIQGMPGASGLKGEPGAMGTPGEPG 686



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 80/162 (49%), Gaps = 18/162 (11%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG      E  PPG QG  G  G  G  G  G  G+ G  G+ G  G PG QG+PG  G 
Sbjct: 613 QGLMGQKGEIGPPGQQGKKGAPGIPGLMGTNGSPGQPGMPGSKGSKGEPGIQGMPGASGL 672

Query: 160 RGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G  G MG PG     G+PG +GK+G KG+                GE G+ G  G NG 
Sbjct: 673 KGEPGAMGTPGEPGYMGLPGIQGKQGDKGNQ---------------GEKGIQGQKGENGR 717

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            GIPG  G+ G  G  G  G  GE G+ G  G +G+SG++G+
Sbjct: 718 QGIPGTQGIQGHHGAKGERGEKGEPGIRGDTGPKGESGVDGL 759



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 79/173 (45%), Gaps = 33/173 (19%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G +G KG PG+ G PG  G PG +GK G +G  G PG  G  G +G RG  G  G P
Sbjct: 449 GKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGHQGIAGTPGVPGTQGIQGARGLPGYKGEP 508

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRN---------------------------GMDGIPGKD 223
           GR G  G  GLPG PGL G+PG                             G  G+PG  
Sbjct: 509 GRDGNKGDRGLPGFPGLHGMPGSKGDMGTKGDKGAPGFYGKKGAKGEKGNAGFPGLPGPA 568

Query: 224 GLP---GKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G P   GKDG+   PG  G  G  G  G  G RG+ GI G PG+  +   K E
Sbjct: 569 GEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGPRGEPGIPGFPGSQGLMGQKGE 621



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 40/96 (41%), Gaps = 34/96 (35%)

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR------------- 247
            PG PG DG+PG   + G+PG+ G+ G  GIPG NG  G +G   P              
Sbjct: 844 FPGLPGRDGVPG---LMGVPGRPGVRGLKGIPGRNGEKGSQGFGYPGEQGPPGPPGPEGP 900

Query: 248 ------------------GNRGKSGINGVPGTPAIC 265
                             G+ GK GI G PG P IC
Sbjct: 901 PGISKEGPPGDPGVPGKDGDHGKPGIQGQPGPPGIC 936


>gi|297664544|ref|XP_002810699.1| PREDICTED: collagen alpha-1(XXIV) chain [Pongo abelii]
          Length = 1714

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/158 (47%), Positives = 93/158 (58%), Gaps = 6/158 (3%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGD 165
            PGL+G  GQ+G   E G +GE G+KGERG +G  G  G PGP    GIPG +G  GPKG 
Sbjct: 1233 PGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGI 1292

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GY G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+ G PG  G 
Sbjct: 1293 QGYHGADGISGNPGKIGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGP 1352

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ G+PG  G  G++G  G +G++G  G  G+ G P 
Sbjct: 1353 KGEQGLPGQPGIQGKRGHRGAQGDQGPCGEPGLKGQPG 1390



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 94/182 (51%), Gaps = 12/182 (6%)

Query: 98   AMQGFCNSTKEYCPPG------LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
             +QG   +T +   PG      LQG +G  GE+G +G  G++GE G +  PG  G  GP 
Sbjct: 975  GLQGLPGNTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGIEGESGLQSEPGAKGDVGPA 1034

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEP 205
            G  G  G+ G +G+ G PG +G+ G +G +G  G  G PG +G  G  GLP      G  
Sbjct: 1035 GSVGGTGEPGLRGEPGAPGEEGLHGKDGLKGVPGGRGLPGEVGEKGEMGLPGIIGPLGRS 1094

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G  G+PG  G+ GIPG+ G PGK G  G  G  GE G  GP G  GKSG  G  GT    
Sbjct: 1095 GQMGLPGPEGIAGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAV 1154

Query: 266  AY 267
             +
Sbjct: 1155 GH 1156



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 96/192 (50%), Gaps = 36/192 (18%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG QGP GQ+G  G  G +G +G +G KG  G  G  GP G+ G  G  G +G  G PG
Sbjct: 916  PPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQGKPG 975

Query: 171  PQGIPG---------DEGKRGPKGDMGYPGRIGLDGRDGLP------------------- 202
             QG+PG         + G RG +GD+G PG +G++G  G+                    
Sbjct: 976  LQGLPGNTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGIEGESGLQSEPGAKGDVGPAG 1035

Query: 203  -----GEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                 GEPGL G PG  G +G+ GKDGL   PG  G+PG  G  GE G+ G  G  G+SG
Sbjct: 1036 SVGGTGEPGLRGEPGAPGEEGLHGKDGLKGVPGGRGLPGEVGEKGEMGLPGIIGPLGRSG 1095

Query: 255  INGVPGTPAICA 266
              G+PG   I  
Sbjct: 1096 QMGLPGPEGIAG 1107



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 92/180 (51%), Gaps = 27/180 (15%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +GV G RG   ++G PG  G  G QG+ G+ G  G KG  G PGP
Sbjct: 1215 QGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGP 1274

Query: 172  QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G   IPG +G  GPKG  GY         PG+IG  G+ GL   PG+ G PGR G+ G 
Sbjct: 1275 SGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGL---PGIRGSPGRTGLAGA 1331

Query: 220  PGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G+ G  G+PG+ G  G K         G+ G RG+RG  G  G  G P +     E
Sbjct: 1332 PGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGEPGLKGQPGE 1391



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 96/198 (48%), Gaps = 34/198 (17%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKG----------------------EIGAKGEMGVKGE 135
             + G+     +  P GL GP G+KG                      E G +GE G +G 
Sbjct: 1167 GIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGY 1226

Query: 136  RGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            +G  G PG+    G  GP G PGD+G++G KG+ G          EG +G KG  G  G+
Sbjct: 1227 KGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERG---------SEGNKGKKGAPGPSGK 1277

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G+ G  GL G  G+ G  G +G+ G PGK G PGK G+PG  G+ G  G+ G  G  G 
Sbjct: 1278 PGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGSPGRTGLAGAPGPPGV 1337

Query: 253  SGINGVPGTPAICAYKRE 270
             G +G+PG+P I   K E
Sbjct: 1338 KGSSGLPGSPGIQGPKGE 1355



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 97/213 (45%), Gaps = 54/213 (25%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------- 143
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG             
Sbjct: 1230 VGVPGLRGATGQQGPPGEPG---DQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGL 1286

Query: 144  --------------------VVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGD 177
                                 +GPPG QG+PG  G  G  G  G PGP       G+PG 
Sbjct: 1287 LGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGS 1346

Query: 178  EGKRGPKGDMGYPGRIGLDGR---------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             G +GPKG+ G PG+ G+ G+          G  GEPGL G PG  G+ G+ G  G PG 
Sbjct: 1347 PGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGEPGLKGQPGEYGVQGLTGFQGFPGP 1406

Query: 229  ---DGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
               +G  G  G +G KG  G RGN G  G  G+
Sbjct: 1407 KGPEGDAGIVGISGPKGPIGHRGNTGPLGREGI 1439



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/167 (44%), Positives = 83/167 (49%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V   G    T E   PGL+G  G  GE G  G+ G+KG  G +G PG VG  G  G+PG 
Sbjct: 1031 VGPAGSVGGTGE---PGLRGEPGAPGEEGLHGKDGLKGVPGGRGLPGEVGEKGEMGLPGI 1087

Query: 157  EGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G  G  G MG PGP+GI   PG  G+ G KGD G  G  G  G  G PG+ G  G  G 
Sbjct: 1088 IGPLGRSGQMGLPGPEGIAGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGA 1147

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  GL G DG PG  G  G +G  GP G  G  G  G PG
Sbjct: 1148 RGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPG 1194



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 89/188 (47%), Gaps = 36/188 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGDM 166
           GL GP G +G+ G KG  G+ G RGE+G PG  G       PG QG+ G EG  GPKG  
Sbjct: 558 GLMGPPGMQGDKGLKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAR 617

Query: 167 GY------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------- 207
           G+             G +GIPG  GK+G KG  G+PG  G  G  GL G PGL       
Sbjct: 618 GFIGSPGEVGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPP 677

Query: 208 --------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGIN 256
                    G  G  G  GIPG  GL G  G+PG  G  GE+G  G  G     G  G  
Sbjct: 678 GFPGLRGSVGPVGPTGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAI 737

Query: 257 GVPGTPAI 264
           G+PG P +
Sbjct: 738 GLPGPPGM 745



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 95/215 (44%), Gaps = 51/215 (23%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            V  QG      E  P GL G +G  G IG KGE G  G  G +G  GV+           
Sbjct: 842  VGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGP 901

Query: 146  -------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG---DEGKRGPKGDMGY 189
                         GPPG QG  G  G RGP G +G  G QG  G   D+GKRGP G +G 
Sbjct: 902  IGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGK 961

Query: 190  ---PGRIGLDGR------------DGLPGEPGLDGI------PGRNGMDGIPGKDGLPGK 228
               PG  G+ G+             GLPGEPGL G+      PG  GM+G P   G+ G+
Sbjct: 962  TGNPGERGVQGKPGLQGLPGNTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPP---GIEGE 1018

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+    G  G+ G  G  G  G+ G+ G PG P 
Sbjct: 1019 SGLQSEPGAKGDVGPAGSVGGTGEPGLRGEPGAPG 1053



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 88/181 (48%), Gaps = 24/181 (13%)

Query: 112  PGLQGPIGQKG---------------EIGAKGEMGVKGERGEKGAPGVVGPPGP------ 150
            PGLQG +G KG               +IG  G+ G+ G RG  G  G+ G PGP      
Sbjct: 1281 PGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGS 1340

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G+PG  G +GPKG+ G PG  GI G  G RG +GD G  G  GL G+   PGE G+ G+
Sbjct: 1341 SGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGEPGLKGQ---PGEYGVQGL 1397

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G  G  G  G +G  G  GI G  G  G +G TGP G  G  G  G  G      ++ E
Sbjct: 1398 TGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGEKGFRGE 1457

Query: 271  S 271
            +
Sbjct: 1458 T 1458



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 91/176 (51%), Gaps = 12/176 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGY 168
            PG +G +G  G +G  GE G++GE G  G  G+ G  G +G+PG  G   + G KG+MG 
Sbjct: 1025 PGAKGDVGPAGSVGGTGEPGLRGEPGAPGEEGLHGKDGLKGVPGGRGLPGEVGEKGEMGL 1084

Query: 169  PG---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            PG           G+PG EG  G  G  G PG+ G  G+ G  GE G  G PG+ G  G 
Sbjct: 1085 PGIIGPLGRSGQMGLPGPEGIAGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGP 1144

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
             G  G  G  G  G  G +GE G+ G RG++G+ G +G+PG      Y  E  ++L
Sbjct: 1145 KGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVL 1200



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 84/175 (48%), Gaps = 27/175 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYP 169
           G +G  GQKG  G  G  G+KGE G++G  G +G  GP G+PG+    G  G KG+ G P
Sbjct: 819 GPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSP 878

Query: 170 GPQG------------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GP G                        +PG  G RGP G  G  G+ G  G DGL GE 
Sbjct: 879 GPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQ 938

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G  G  G  G  G  GL GK G PG  G  G+ G+ G  GN G  G+ G PG
Sbjct: 939 GIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQGKPGLQGLPGNTGDRGLPGEPG 993



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 85/183 (46%), Gaps = 25/183 (13%)

Query: 111  PPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM- 166
            P G+ G  GQ+G  G    KG++G  GE G +G PG +G  GP+G  G  G  G  G M 
Sbjct: 1102 PEGIAGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMG 1161

Query: 167  --------GYPGPQGIPGDEGKRGPKGDMGYPGR-------------IGLDGRDGLPGEP 205
                    GY G QG PG  G  GPKG+ GYPG               G  G  G  GEP
Sbjct: 1162 PDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEP 1221

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G +G  G  G+ G+ G  G  G  G PG  G  G KG  G  GN+GK G  G  G P I 
Sbjct: 1222 GAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIP 1281

Query: 266  AYK 268
              +
Sbjct: 1282 GLQ 1284



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 71/134 (52%), Gaps = 6/134 (4%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           +G  G+ G  G  G PG+ GP GP+G PG    +   G KGD G  G  G PG +G +G 
Sbjct: 512 RGPRGIPGPHGNPGLPGLPGPKGPKGEPGFSPGQAVPGEKGDQGLSGLMGPPGMQGDKGL 571

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           K   G+PG  GL G  G+PG  G  G PG  G  G+ G +G PG  G  G  G+ GE G 
Sbjct: 572 K---GHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGARGFIGSPGEVGQ 628

Query: 244 TGPRGNRGKSGING 257
            GP G RG  GI G
Sbjct: 629 LGPEGERGIPGIRG 642



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 100/249 (40%), Gaps = 75/249 (30%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGI 153
           +   G+        P G  GP G +G IG+ GE+G  G  GE+G PG+ G     G QG 
Sbjct: 593 IGSPGYPGRQGLAGPEGNPGPKGARGFIGSPGEVGQLGPEGERGIPGIRGKKGFKGRQGF 652

Query: 154 PGDEGKRGPKGDMGYP------------------------GPQGIP-------------- 175
           PGD G RGP G  G P                        GP GIP              
Sbjct: 653 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPTGPAGIPGPMGLSGNKGLPGI 712

Query: 176 -GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------------- 217
            GD+G++G  G++G PG  G  G  GLPG PG+ G PG +G                   
Sbjct: 713 KGDKGEQGTAGELGEPGYPGDKGAIGLPGPPGMRGKPGPSGQTGDPGLQGPSGPPGPEGF 772

Query: 218 ----GIPGKDGLPGKDGIPGT---------NGTNGEKGMTGPRGN---RGKSGINGVPGT 261
               GIPG++G  G  GI G           GT GE+G  GP G    RGK G  G  G 
Sbjct: 773 PGDIGIPGQNGPEGPKGILGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGE 832

Query: 262 PAICAYKRE 270
           P     K E
Sbjct: 833 PGPEGLKGE 841



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 90/183 (49%), Gaps = 39/183 (21%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IG  GE+G +G+ G+K   G  G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 802 LKGTQGEEGPIGPFGELGPRGKPGQK---GYAGEPGPEGLKGEVGDQGNIGKIGETGPVG 858

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
           +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 859 LPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG 918

Query: 213 RN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGING 257
                G  G  G DGL G+ GI G  G  G++G  GP            RG +GK G+ G
Sbjct: 919 SQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQGKPGLQG 978

Query: 258 VPG 260
           +PG
Sbjct: 979 LPG 981



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 81/167 (48%), Gaps = 21/167 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
           PG  G IG  G  G +G  G +G  G KGA G +G PG  G  G EG+R   G +G  G+
Sbjct: 587 PGFAGNIGSPGYPGRQGLAGPEGNPGPKGARGFIGSPGEVGQLGPEGERGIPGIRGKKGF 646

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGI 210
            G QG PGD G RGP G  G PG                   +G  G  G+PG  GL G 
Sbjct: 647 KGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPTGPAGIPGPMGLSGN 706

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G+ G  G+ G  G+ G PG  G  G  G+ GP G RGK G +G
Sbjct: 707 KGLPGIKGDKGEQGTAGELGEPGYPGDKGAIGLPGPPGMRGKPGPSG 753



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 68/126 (53%), Gaps = 12/126 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           ++G  G+ GP G  G+PG  G +GPKG+ G+   Q +PG++G +G  G MG PG   + G
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGEPGFSPGQAVPGEKGDQGLSGLMGPPG---MQG 567

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             GL G PGL   PG  G  GIPG  G  G  G PG       +G+ GP GN G  G  G
Sbjct: 568 DKGLKGHPGL---PGLRGEQGIPGFAGNIGSPGYPG------RQGLAGPEGNPGPKGARG 618

Query: 258 VPGTPA 263
             G+P 
Sbjct: 619 FIGSPG 624



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 89/182 (48%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
           GL G  G KGE G  GE+G  G  G+KGA G+ GPPG +G PG  G+ G           
Sbjct: 708 GLPGIKGDKGEQGTAGELGEPGYPGDKGAIGLPGPPGMRGKPGPSGQTGDPGLQGPSGPP 767

Query: 162 ----PKGDMGYPG------PQGIPGD------------EGKRGPKGDMGYPGRIGLDGRD 199
                 GD+G PG      P+GI G+            +G+ GP G  G  G  G  G+ 
Sbjct: 768 GPEGFPGDIGIPGQNGPEGPKGILGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQK 827

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  GEPG +G+ G  G  G  GK G      LPG+ G+ G+ G  GE+G  GP G +G+ 
Sbjct: 828 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEK 887

Query: 254 GI 255
           G+
Sbjct: 888 GV 889



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 93/228 (40%), Gaps = 57/228 (25%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK------------------GA 141
           QG      E   PG +G IG  G  G +G+ G  G+ G+                   G 
Sbjct: 719 QGTAGELGEPGYPGDKGAIGLPGPPGMRGKPGPSGQTGDPGLQGPSGPPGPEGFPGDIGI 778

Query: 142 PGVVGPPGPQGIPGD------------EGKRGPKGDMGYPGPQGIPGD---------EGK 180
           PG  GP GP+GI G+            +G+ GP G  G  GP+G PG          EG 
Sbjct: 779 PGQNGPEGPKGILGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGEPGPEGL 838

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI--------- 231
           +G  GD G  G+IG  G  GLPGE G+ G  G  G  G PG  G  G+ G+         
Sbjct: 839 KGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGV 898

Query: 232 ---------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                    PG  G  G  G  GP+G RG  G +G+ G   I   K E
Sbjct: 899 PGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGE 946


>gi|395732291|ref|XP_002812467.2| PREDICTED: macrophage receptor MARCO [Pongo abelii]
          Length = 486

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/170 (45%), Positives = 94/170 (55%), Gaps = 18/170 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           G QGP G  G+ GA G  G +GE+G KG  G++GP G  G         +PG +G RG K
Sbjct: 171 GFQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGDKGDLGLPGSKGDRGMK 230

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRN--- 214
           GD   MG PG QG  GD G+ GP G  G+PG  G  G+ GL   PG PG  G PG     
Sbjct: 231 GDTGVMGPPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 290

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G PG+ GLPG  G PG  G  G KG TG +G +G+ G +GVPG   +
Sbjct: 291 GSAGSPGRAGLPGSPGSPGAAGLKGSKGDTGLQGQQGRKGESGVPGPAGV 340



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/182 (42%), Positives = 94/182 (51%), Gaps = 24/182 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD G+ GP       
Sbjct: 201 GLIGPKGETGTKGDKGDLGLPGSKGDRGMKGDTGVMGPPGAQGSKGDSGRPGPPGLAGFP 260

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD 217
             KGD G PG QG+PG  G  G  G  G PG  G  GR GL   PG PG  G+ G  G  
Sbjct: 261 GAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGAAGLKGSKGDT 320

Query: 218 GIPGKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+ G+ G  G+ G+PG  G  GE         KG  GP G +G  G+ G  G   +   K
Sbjct: 321 GLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPGPAGQKGDRGVTGSSGEQGVKGEK 380

Query: 269 RE 270
            E
Sbjct: 381 GE 382



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 81/165 (49%), Gaps = 3/165 (1%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G    T    PPG QG  G  G  G  G  G  G +G++G PG+ G PGP G  G  G 
Sbjct: 227 RGMKGDTGVMGPPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGA 286

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G  G PG  G+PG  G  G  G  G  G  GL G+ G  GE    G+PG  G+ G 
Sbjct: 287 KGEPGSAGSPGRAGLPGSPGSPGAAGLKGSKGDTGLQGQQGRKGE---SGVPGPAGVKGE 343

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  GL G  G PG  G  G++G+TG  G +G  G  G  G  ++
Sbjct: 344 QGSPGLAGPKGAPGPAGQKGDRGVTGSSGEQGVKGEKGERGENSV 388



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 74/150 (49%), Gaps = 27/150 (18%)

Query: 143 GVVGPPGPQGIPGD---------EGKRGPKGDMGYPGPQ------------GIPGDEGKR 181
           G  G  GPQG PG          +G++G KGD G  GP+            G+PG +G R
Sbjct: 168 GEAGFQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGDKGDLGLPGSKGDR 227

Query: 182 GPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G KGD   MG PG  G  G  G PG PGL G PG  G  G PG  G+PG    PG  G  
Sbjct: 228 GMKGDTGVMGPPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGP---PGAVGHP 284

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G KG  G  G+ G++G+ G PG+P     K
Sbjct: 285 GAKGEPGSAGSPGRAGLPGSPGSPGAAGLK 314



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 77/165 (46%), Gaps = 21/165 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQ 151
             QG    +    PPGL G  G KG+ G  G  GV G        G KG PG  G PG  
Sbjct: 240 GAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGRA 299

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G                PG  G +G KGD G  G+ G  G  G+PG  G+ G  
Sbjct: 300 GLPGSPGS---------------PGAAGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQ 344

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G+ G  G  G  G+ G  G  G++GE+G+ G +G RG++ ++
Sbjct: 345 GSPGLAGPKGAPGPAGQKGDRGVTGSSGEQGVKGEKGERGENSVS 389



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 15/124 (12%)

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           + G+ G +GP+G  G  G  G PG +G++G KGD G    IG  G  G  G+ G  G+PG
Sbjct: 166 VKGEAGFQGPQGAPGKQGATGTPGPQGEKGSKGDGGL---IGPKGETGTKGDKGDLGLPG 222

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPGTPA 263
             G  G+ G  G+ G    PG  G+ G+ G  GP         +G++G+ G+ GVPG P 
Sbjct: 223 SKGDRGMKGDTGVMGP---PGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPG 279

Query: 264 ICAY 267
              +
Sbjct: 280 AVGH 283


>gi|296198464|ref|XP_002746714.1| PREDICTED: collagen alpha-1(XXI) chain isoform 2 [Callithrix
           jacchus]
          Length = 954

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 94/168 (55%), Gaps = 12/168 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
           PGL GP G+ G  G  G MG  G +GE G+PG  G  GP+G       PG +G  G KG+
Sbjct: 559 PGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGPRGEPGIPGFPGSQGLMGQKGE 618

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G PG QG  G  G  G  G  G PG+ G+ G  G  GEPG+ G+PG +G+ G PG  G 
Sbjct: 619 IGPPGQQGKKGAPGIPGLMGTNGSPGQPGMPGSKGSKGEPGIQGMPGASGLKGEPGAMGT 678

Query: 226 PGKD---GIPGTNGTNGEKGMTGPRGNRGKSGIN---GVPGTPAICAY 267
           PG+    G+PG  G  G+KG  G +G +G+ G N   G+PGT  I  +
Sbjct: 679 PGEPGYMGLPGIQGKQGDKGNQGEKGIQGQKGENGRQGIPGTQGIQGH 726



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/146 (47%), Positives = 81/146 (55%), Gaps = 9/146 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG +GQKGEIG        G++G+KGAPG+ G  G  G PG  G  G KG  G PG 
Sbjct: 607 PGSQGLMGQKGEIGP------PGQQGKKGAPGIPGLMGTNGSPGQPGMPGSKGSKGEPGI 660

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QG+PG  G +G  G MG PG     G  GLPG  G  G  G  G  GI G+ G  G+ GI
Sbjct: 661 QGMPGASGLKGEPGAMGTPGE---PGYMGLPGIQGKQGDKGNQGEKGIQGQKGENGRQGI 717

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGING 257
           PGT G  G  G  G RG +G+ GI G
Sbjct: 718 PGTQGIQGHHGAKGERGEKGEPGIRG 743



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 103/227 (45%), Gaps = 43/227 (18%)

Query: 73  EKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIG------------- 119
           E+  + +    P   LN  S +        C   K    PGLQGP G             
Sbjct: 413 EQNNRETACEIPGFCLNGPSDVGSTPAPCICPPGK----PGLQGPKGDPGLPGNPGYPGQ 468

Query: 120 --QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
             Q G+ G +G  G  G  G +G  G  G PG +G PG +G +G +G  G+PG  G+PG 
Sbjct: 469 PGQDGKPGHQGIAGTPGVPGTQGIQGARGLPGYKGEPGRDGNKGDRGLPGFPGLHGMPGS 528

Query: 178 EGKRGPKGDMGYPG------RIGLDGRDGLPGEPGLDGIPGRNGMDGI------------ 219
           +G  G KGD G PG        G  G  G PG PG  G PGR+G DG+            
Sbjct: 529 KGDMGTKGDKGAPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGSPGFKGEAGS 588

Query: 220 ---PGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              PG+D   G PG  G PG+ G  G+KG  GP G +GK G  G+PG
Sbjct: 589 PGAPGQDGPRGEPGIPGFPGSQGLMGQKGEIGPPGQQGKKGAPGIPG 635



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 89/169 (52%), Gaps = 18/169 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGA------------PGVVGPPGPQGIPGDEGKR 160
           GL G  G  G  G+KG+MG KG++G  G              G  G PGP G PG  GK 
Sbjct: 515 GLPGFPGLHGMPGSKGDMGTKGDKGAPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKD 574

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G  G+ G  G PG  G+ GP+G+    G+PG  GL G+ G  G PG  G  G  G+ 
Sbjct: 575 GLMGSPGFKGEAGSPGAPGQDGPRGEPGIPGFPGSQGLMGQKGEIGPPGQQGKKGAPGIP 634

Query: 218 GIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPA 263
           G+ G +G PG+ G+PG+ G+ GE   +GM G  G +G+ G  G PG P 
Sbjct: 635 GLMGTNGSPGQPGMPGSKGSKGEPGIQGMPGASGLKGEPGAMGTPGEPG 683



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 82/165 (49%), Gaps = 24/165 (14%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGD 156
           QG      E  PPG QG   +KG  G  G MG  G  G+ G PG  G    PG QG+PG 
Sbjct: 610 QGLMGQKGEIGPPGQQG---KKGAPGIPGLMGTNGSPGQPGMPGSKGSKGEPGIQGMPGA 666

Query: 157 EGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G +G  G MG PG     G+PG +GK+G KG+                GE G+ G  G 
Sbjct: 667 SGLKGEPGAMGTPGEPGYMGLPGIQGKQGDKGNQ---------------GEKGIQGQKGE 711

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           NG  GIPG  G+ G  G  G  G  GE G+ G  G +G+SG++G+
Sbjct: 712 NGRQGIPGTQGIQGHHGAKGERGEKGEPGIRGDTGPKGESGVDGL 756



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 79/173 (45%), Gaps = 33/173 (19%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G +G KG PG+ G PG  G PG +GK G +G  G PG  G  G +G RG  G  G P
Sbjct: 446 GKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGHQGIAGTPGVPGTQGIQGARGLPGYKGEP 505

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRN---------------------------GMDGIPGKD 223
           GR G  G  GLPG PGL G+PG                             G  G+PG  
Sbjct: 506 GRDGNKGDRGLPGFPGLHGMPGSKGDMGTKGDKGAPGFYGKKGAKGEKGNAGFPGLPGPA 565

Query: 224 GLP---GKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G P   GKDG+   PG  G  G  G  G  G RG+ GI G PG+  +   K E
Sbjct: 566 GEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGPRGEPGIPGFPGSQGLMGQKGE 618



 Score = 43.1 bits (100), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 40/96 (41%), Gaps = 34/96 (35%)

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR------------- 247
            PG PG DG+PG   + G+PG+ G+ G  GIPG NG  G +G   P              
Sbjct: 841 FPGLPGRDGVPG---LMGVPGRPGVRGLKGIPGRNGEKGSQGFGYPGEQGPPGPPGPEGP 897

Query: 248 ------------------GNRGKSGINGVPGTPAIC 265
                             G+ GK GI G PG P IC
Sbjct: 898 PGISKEGPPGDPGVPGKDGDHGKPGIQGQPGPPGIC 933


>gi|115392133|ref|NP_690850.2| collagen alpha-1(XXIV) chain precursor [Homo sapiens]
 gi|290457636|sp|Q17RW2.2|COOA1_HUMAN RecName: Full=Collagen alpha-1(XXIV) chain; Flags: Precursor
 gi|119593599|gb|EAW73193.1| collagen, type XXIV, alpha 1 [Homo sapiens]
          Length = 1714

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/158 (47%), Positives = 93/158 (58%), Gaps = 6/158 (3%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGD 165
            PGL+G  GQ+G   E G +GE G+KGERG +G  G  G PGP    GIPG +G  GPKG 
Sbjct: 1233 PGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGI 1292

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GY G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+ G PG  G 
Sbjct: 1293 QGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGP 1352

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ G+PG  G  G++G  G +G++G  G  G+ G P 
Sbjct: 1353 KGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPG 1390



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/169 (44%), Positives = 99/169 (58%), Gaps = 15/169 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGP---QGIPGDEGKRGPK 163
            G+QG  G+KG+ G +G  G+       GERG +G PG+ G PG    +G+PG+ G RG +
Sbjct: 939  GIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQ 998

Query: 164  GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GD+G PG  G+   PG EG+ G +G+ G  G +G  G  G  GEPGL G PG  G +G+ 
Sbjct: 999  GDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQ 1058

Query: 221  GKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            GKDGL   PG  G+PG +G  GE G+ G  G  G+SG  G+PG   I  
Sbjct: 1059 GKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVG 1107



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 91/189 (48%), Gaps = 27/189 (14%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            V  QG      E  P GL G +G  G IG KGE G  G  G +G  GV+           
Sbjct: 842  VGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGP 901

Query: 146  -------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                         GPPG QG  G  G RGP G +G  G QG  G++G +G +G  G  G+
Sbjct: 902  IGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGK 961

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G  G  G  G+PGL G+PG  G  G+PG+   PG  G+ G  G  GE GM GP G  G+
Sbjct: 962  TGNPGERGFQGKPGLQGLPGSTGDRGLPGE---PGLRGLQGDVGPPGEMGMEGPPGTEGE 1018

Query: 253  SGINGVPGT 261
            SG+ G PG 
Sbjct: 1019 SGLQGEPGA 1027



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 92/182 (50%), Gaps = 12/182 (6%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG   ST +   PG  G  G +G++G  GEMG++G  G +G  G+ G PG +G  G  
Sbjct: 975  GLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTA 1034

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------- 210
            G  G  G+ G  G  G PG+EG +G  G  G PG  GL G DG  GE GL GI       
Sbjct: 1035 GSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRS 1094

Query: 211  -----PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                 PG  G+ GIPG+ G PGK G  G  G  GE G  GP G  GKSG  G  GT    
Sbjct: 1095 GQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAV 1154

Query: 266  AY 267
             +
Sbjct: 1155 GH 1156



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 92/180 (51%), Gaps = 27/180 (15%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +GV G RG   ++G PG  G  G QG+ G+ G  G KG  G PGP
Sbjct: 1215 QGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGP 1274

Query: 172  QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G   IPG +G  GPKG  GY         PG+IG  G+ GL   PG+ G PGR G+ G 
Sbjct: 1275 SGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGL---PGIRGGPGRTGLAGA 1331

Query: 220  PGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G+ G  G+PG+ G  G K         G+ G RG+RG  G  G  G P +     E
Sbjct: 1332 PGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGE 1391



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 94/206 (45%), Gaps = 51/206 (24%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------- 143
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG             
Sbjct: 1230 VGVPGLRGATGQQGPPGEPG---DQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGL 1286

Query: 144  --------------------VVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGD 177
                                 +GPPG QG+PG  G  G  G  G PGP       G+PG 
Sbjct: 1287 LGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGS 1346

Query: 178  EGKRGPKGDMGYPGRIGLDGR---------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             G +GPKG+ G PG+ G+ G+          G  G+PGL G PG  G+ G+ G  G PG 
Sbjct: 1347 PGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGP 1406

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G  G  G  GP G+RG +G
Sbjct: 1407 KGPEGDAGIVGISGPKGPIGHRGNTG 1432



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 94/189 (49%), Gaps = 16/189 (8%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM-------------GVKGERGEKGAPGV 144
             + G+     +  P GL GP G+KG  G    +             G +GERGE GA G 
Sbjct: 1167 GIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGY 1226

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             G  G  G+ G  G++GP G+ G  G QG+ G+ G  G KG  G PG  G  G  GL G 
Sbjct: 1227 KGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGL 1286

Query: 205  PGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  GI G +G DGI   PGK G PGK G+PG  G  G  G+ G  G  G  G +G+PG+
Sbjct: 1287 LGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGS 1346

Query: 262  PAICAYKRE 270
            P I   K E
Sbjct: 1347 PGIQGPKGE 1355



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 83/149 (55%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G      V GE+G++G  G++GPPG QG   D+G +G  G  G PG 
Sbjct: 527 PGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQG---DKGLKGHPGLPGLPGE 583

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QGIPG  G     G  GYPGR GL G +G PG  G  G  G  G  G  G +G  G  GI
Sbjct: 584 QGIPGFAGN---IGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGI 640

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G +G  G  G+RG +G++G PG
Sbjct: 641 RGKKGFKGRQGFPGDFGDRGPAGLDGSPG 669



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 96/207 (46%), Gaps = 46/207 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGI---PGDEGKR 160
            GLQG  G KG  G +G  G  GE+GE G PG++GP         PGP+GI   PG  G+ 
Sbjct: 1056 GLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRP 1115

Query: 161  GPKGDMGYPGP------QGIPGDEGKRGPK------GDMGYPGRIGLDGRDGLPGEPGLD 208
            G KGD G  GP      +G PG  GK GPK      G +G+ G +G DG  G+PG  G  
Sbjct: 1116 GKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQ 1175

Query: 209  GIPGRNGMDGIPGKDGLPGKD----------------------GIPGTNGTNGEKGMTGP 246
            G PG +G+ G  G+ G PG+D                      G PG  G  G  G+ G 
Sbjct: 1176 GQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGL 1235

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCS 273
            RG  G+ G  G PG       K E  S
Sbjct: 1236 RGATGQQGPPGEPGDQGEQGLKGERGS 1262



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 96/184 (52%), Gaps = 24/184 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPG---------VVGPPGPQGIPGDEGKR 160
            GLQG  G KG++G  G +G  GE   RGE GAPG         + G PG +G+PG++G+ 
Sbjct: 1020 GLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGE- 1078

Query: 161  GPKGDMGYP---------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
              KG+MG P         G  G+PG EG  G  G  G PG+ G  G+ G  GE G  G P
Sbjct: 1079 --KGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPP 1136

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G+ G  G  G  G  G  G  G  G +GE G+ G RG++G+ G +G+PG      Y  E 
Sbjct: 1137 GKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGED 1196

Query: 272  CSLL 275
             ++L
Sbjct: 1197 STVL 1200



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 82/167 (49%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V   G    T E   PGL+G  G  GE G +G+ G+KG  G +G PG  G  G  G+PG 
Sbjct: 1031 VGTAGSVGGTGE---PGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGI 1087

Query: 157  EGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G  G  G  G PGP+   GIPG  G+ G KGD G  G  G  G  G PG+ G  G  G 
Sbjct: 1088 IGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGA 1147

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  GL G DG PG  G  G +G  GP G  G  G  G PG
Sbjct: 1148 RGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPG 1194



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 90/172 (52%), Gaps = 21/172 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +G+ G KG  G+ G  GE+G PG  G  G  G PG +G  GP+G+ G  G Q
Sbjct: 558 GLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQ 617

Query: 173 GI---PGDEGKRGPKGDMGYPG---RIGLDGRDGLPGE------PGLDGIPG-------- 212
           G    PG+ G+ GP+G+ G PG   + G  GR G PG+       GLDG PG        
Sbjct: 618 GFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPP 677

Query: 213 -RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G+ G  G  G  G  GIPG  G +G KG+ G +G++G+ G  G  G P 
Sbjct: 678 GFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPG 729



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 72/132 (54%), Gaps = 12/132 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG--- 194
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q +PG++G +G  G MG PG  G   
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKG 570

Query: 195 LDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTN------GEKGMTG 245
           L G  GLPG PG  GIPG     G  G PG+ GL G +G PG  G        GE G  G
Sbjct: 571 LKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLG 630

Query: 246 PRGNRGKSGING 257
           P G RG  GI G
Sbjct: 631 PEGERGIPGIRG 642



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 88/192 (45%), Gaps = 27/192 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   QG       +   G +G  GQKG  G  G  G+KGE G++G  G +G  GP G+PG
Sbjct: 802 LKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPG 861

Query: 156 D---EGKRGPKGDMGYPGPQG------------------------IPGDEGKRGPKGDMG 188
           +    G  G KG+ G PGP G                        +PG  G RGP G  G
Sbjct: 862 EVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQG 921

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+ G  G DGL GE G+ G  G  G  G  G  GL GK G PG  G  G+ G+ G  G
Sbjct: 922 PKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPG 981

Query: 249 NRGKSGINGVPG 260
           + G  G+ G PG
Sbjct: 982 STGDRGLPGEPG 993



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 92/184 (50%), Gaps = 39/184 (21%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IGA GE+G +G+ G+KG     G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 802 LKGTQGEEGPIGAFGELGPRGKPGQKG---YAGEPGPEGLKGEVGDQGNIGKIGETGPVG 858

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
           +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 859 LPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG 918

Query: 213 RN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGING 257
                G  G  G DGL G+ GI G  G  G++G  GP            RG +GK G+ G
Sbjct: 919 SQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQG 978

Query: 258 VPGT 261
           +PG+
Sbjct: 979 LPGS 982



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 90/198 (45%), Gaps = 25/198 (12%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQG 152
            ++   G    T    P G+ G  GQ+G  G    KG++G  GE G +G PG +G  GP+G
Sbjct: 1087 IIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKG 1146

Query: 153  IPGDEGK------RGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGR----------- 192
              G  G        GP G+ G P   G QG PG  G  GPKG+ GYPG            
Sbjct: 1147 ARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPR 1206

Query: 193  --IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
               G  G  G  GEPG +G  G  G+ G+ G  G  G  G PG  G  G KG  G  GN+
Sbjct: 1207 GEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNK 1266

Query: 251  GKSGINGVPGTPAICAYK 268
            GK G  G  G P I   +
Sbjct: 1267 GKKGAPGPSGKPGIPGLQ 1284



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 74/140 (52%), Gaps = 3/140 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G  G+ G  GA G  GVKG  G  G+PG+ GP G QG+PG  G +G +G  G  G 
Sbjct: 1317 PGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGD 1376

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG  GD G +G  G+ G     GL G  G PG  G +G  G  G+ G  G  G  G  G 
Sbjct: 1377 QGPCGDPGLKGQPGEYGV---QGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGP 1433

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G  G  G TGPRG +G
Sbjct: 1434 LGREGIIGPTGRTGPRGEKG 1453



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 105/268 (39%), Gaps = 78/268 (29%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           +   G+        P G  GP G +G IG+ GE G  G  GE+G PG+ G  G    QG 
Sbjct: 593 IGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGF 652

Query: 154 PGDEGKRGPKGDMGYPG------------------------PQGIPG------------- 176
           PGD G RGP G  G PG                        P GIPG             
Sbjct: 653 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGI 712

Query: 177 --DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------------- 217
             D+G++G  G++G PG  G  G  GLPG PG+ G  G +G                   
Sbjct: 713 KGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGF 772

Query: 218 ----GIPGKDGLPGKDGIPGT---------NGTNGEK------GMTGPRGNRGKSGINGV 258
               GIPG++G  G  G+ G           GT GE+      G  GPRG  G+ G  G 
Sbjct: 773 PGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGE 832

Query: 259 PGTPAICAYKRESCSLLPNSETSQLLIP 286
           PG   +     +  ++    ET  + +P
Sbjct: 833 PGPEGLKGEVGDQGNIGKIGETGPVGLP 860



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 84/180 (46%), Gaps = 33/180 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G KG +G +G  G   +KG +GE+G  G  G  GP+G PG       KG  G 
Sbjct: 779 PGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQ------KGYAGE 832

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP+G+      +G  GD G  G+IG  G  GLPGE G+ G  G  G  G PG  G  G+
Sbjct: 833 PGPEGL------KGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGE 886

Query: 229 DGI------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+                  PG  G  G  G  GP+G RG  G +G+ G   I   K E
Sbjct: 887 KGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGE 946



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 9/113 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY 168
            PG+QGP   KGE G  G+ G++G+RG +GA G  GP   PG +G PG+ G +G  G  G+
Sbjct: 1347 PGIQGP---KGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGF 1403

Query: 169  PGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            PGP+G  GD    G  GPKG +G+ G  G  GR+G+ G  G  G  G  G  G
Sbjct: 1404 PGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGEKGFRG 1456



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 88/182 (48%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-------------------- 152
           GL G  G KGE G  GE+G  G  G+KGA G+ GPPG +G                    
Sbjct: 708 GLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPP 767

Query: 153 ----------IPGDEGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                     IPG  G  GPKG +G    PGP G+ G +G+ GP G  G  G  G  G+ 
Sbjct: 768 GPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQK 827

Query: 200 GLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  GEPG +G+ G  G  G  GK       GLPG+ G+ G+ G  GE+G  GP G +G+ 
Sbjct: 828 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEK 887

Query: 254 GI 255
           G+
Sbjct: 888 GV 889



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            G QGP G  G  G  GE GV+G  G +G PG  GP G  GI G  G +GP G  G  GP 
Sbjct: 1375 GDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPL 1434

Query: 172  --QGIPGDEGKRGPKGDMGYPGR 192
              +GI G  G+ GP+G+ G+ G 
Sbjct: 1435 GREGIIGPTGRTGPRGEKGFRGE 1457


>gi|109658810|gb|AAI17171.1| Collagen, type XXIV, alpha 1 [Homo sapiens]
 gi|109730579|gb|AAI13655.1| Collagen, type XXIV, alpha 1 [Homo sapiens]
          Length = 1714

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/158 (47%), Positives = 93/158 (58%), Gaps = 6/158 (3%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGD 165
            PGL+G  GQ+G   E G +GE G+KGERG +G  G  G PGP    GIPG +G  GPKG 
Sbjct: 1233 PGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGI 1292

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GY G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+ G PG  G 
Sbjct: 1293 QGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGP 1352

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ G+PG  G  G++G  G +G++G  G  G+ G P 
Sbjct: 1353 KGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPG 1390



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/169 (44%), Positives = 99/169 (58%), Gaps = 15/169 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGP---QGIPGDEGKRGPK 163
            G+QG  G+KG+ G +G  G+       GERG +G PG+ G PG    +G+PG+ G RG +
Sbjct: 939  GIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQ 998

Query: 164  GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GD+G PG  G+   PG EG+ G +G+ G  G +G  G  G  GEPGL G PG  G +G+ 
Sbjct: 999  GDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQ 1058

Query: 221  GKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            GKDGL   PG  G+PG +G  GE G+ G  G  G+SG  G+PG   I  
Sbjct: 1059 GKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVG 1107



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 91/189 (48%), Gaps = 27/189 (14%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            V  QG      E  P GL G +G  G IG KGE G  G  G +G  GV+           
Sbjct: 842  VGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGP 901

Query: 146  -------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                         GPPG QG  G  G RGP G +G  G QG  G++G +G +G  G  G+
Sbjct: 902  IGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGK 961

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G  G  G  G+PGL G+PG  G  G+PG+   PG  G+ G  G  GE GM GP G  G+
Sbjct: 962  TGNPGERGFQGKPGLQGLPGSTGDRGLPGE---PGLRGLQGDVGPPGEMGMEGPPGTEGE 1018

Query: 253  SGINGVPGT 261
            SG+ G PG 
Sbjct: 1019 SGLQGEPGA 1027



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 92/182 (50%), Gaps = 12/182 (6%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG   ST +   PG  G  G +G++G  GEMG++G  G +G  G+ G PG +G  G  
Sbjct: 975  GLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTA 1034

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------- 210
            G  G  G+ G  G  G PG+EG +G  G  G PG  GL G DG  GE GL GI       
Sbjct: 1035 GSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRS 1094

Query: 211  -----PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                 PG  G+ GIPG+ G PGK G  G  G  GE G  GP G  GKSG  G  GT    
Sbjct: 1095 GQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAV 1154

Query: 266  AY 267
             +
Sbjct: 1155 GH 1156



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 92/180 (51%), Gaps = 27/180 (15%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +GV G RG   ++G PG  G  G QG+ G+ G  G KG  G PGP
Sbjct: 1215 QGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGP 1274

Query: 172  QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G   IPG +G  GPKG  GY         PG+IG  G+ GL   PG+ G PGR G+ G 
Sbjct: 1275 SGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGL---PGIRGGPGRTGLAGA 1331

Query: 220  PGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G+ G  G+PG+ G  G K         G+ G RG+RG  G  G  G P +     E
Sbjct: 1332 PGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGE 1391



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 94/206 (45%), Gaps = 51/206 (24%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------- 143
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG             
Sbjct: 1230 VGVPGLRGATGQQGPPGEPG---DQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGL 1286

Query: 144  --------------------VVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGD 177
                                 +GPPG QG+PG  G  G  G  G PGP       G+PG 
Sbjct: 1287 LGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGS 1346

Query: 178  EGKRGPKGDMGYPGRIGLDGR---------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             G +GPKG+ G PG+ G+ G+          G  G+PGL G PG  G+ G+ G  G PG 
Sbjct: 1347 PGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGP 1406

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G  G  G  GP G+RG +G
Sbjct: 1407 KGPEGDAGIVGISGPKGPIGHRGNTG 1432



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 94/189 (49%), Gaps = 16/189 (8%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM-------------GVKGERGEKGAPGV 144
             + G+     +  P GL GP G+KG  G    +             G +GERGE GA G 
Sbjct: 1167 GIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGY 1226

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             G  G  G+ G  G++GP G+ G  G QG+ G+ G  G KG  G PG  G  G  GL G 
Sbjct: 1227 KGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGL 1286

Query: 205  PGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  GI G +G DGI   PGK G PGK G+PG  G  G  G+ G  G  G  G +G+PG+
Sbjct: 1287 LGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGS 1346

Query: 262  PAICAYKRE 270
            P I   K E
Sbjct: 1347 PGIQGPKGE 1355



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 83/149 (55%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G      V GE+G++G  G++GPPG QG   D+G +G  G  G PG 
Sbjct: 527 PGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQG---DKGLKGHPGLPGLPGE 583

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QGIPG  G     G  GYPGR GL G +G PG  G  G  G  G  G  G +G  G  GI
Sbjct: 584 QGIPGFAGN---IGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGI 640

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G +G  G  G+RG +G++G PG
Sbjct: 641 RGKKGFKGRQGFPGDFGDRGPAGLDGSPG 669



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 96/207 (46%), Gaps = 46/207 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGI---PGDEGKR 160
            GLQG  G KG  G +G  G  GE+GE G PG++GP         PGP+GI   PG  G+ 
Sbjct: 1056 GLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRP 1115

Query: 161  GPKGDMGYPGP------QGIPGDEGKRGPK------GDMGYPGRIGLDGRDGLPGEPGLD 208
            G KGD G  GP      +G PG  GK GPK      G +G+ G +G DG  G+PG  G  
Sbjct: 1116 GKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQ 1175

Query: 209  GIPGRNGMDGIPGKDGLPGKD----------------------GIPGTNGTNGEKGMTGP 246
            G PG +G+ G  G+ G PG+D                      G PG  G  G  G+ G 
Sbjct: 1176 GQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGL 1235

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCS 273
            RG  G+ G  G PG       K E  S
Sbjct: 1236 RGATGQQGPPGEPGDQGEQGLKGERGS 1262



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 96/184 (52%), Gaps = 24/184 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPG---------VVGPPGPQGIPGDEGKR 160
            GLQG  G KG++G  G +G  GE   RGE GAPG         + G PG +G+PG++G+ 
Sbjct: 1020 GLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGE- 1078

Query: 161  GPKGDMGYP---------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
              KG+MG P         G  G+PG EG  G  G  G PG+ G  G+ G  GE G  G P
Sbjct: 1079 --KGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPP 1136

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G+ G  G  G  G  G  G  G  G +GE G+ G RG++G+ G +G+PG      Y  E 
Sbjct: 1137 GKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGED 1196

Query: 272  CSLL 275
             ++L
Sbjct: 1197 STVL 1200



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 82/167 (49%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V   G    T E   PGL+G  G  GE G +G+ G+KG  G +G PG  G  G  G+PG 
Sbjct: 1031 VGTAGSVGGTGE---PGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGI 1087

Query: 157  EGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G  G  G  G PGP+   GIPG  G+ G KGD G  G  G  G  G PG+ G  G  G 
Sbjct: 1088 IGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGA 1147

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  GL G DG PG  G  G +G  GP G  G  G  G PG
Sbjct: 1148 RGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPG 1194



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 90/172 (52%), Gaps = 21/172 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +G+ G KG  G+ G  GE+G PG  G  G  G PG +G  GP+G+ G  G Q
Sbjct: 558 GLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQ 617

Query: 173 GI---PGDEGKRGPKGDMGYPG---RIGLDGRDGLPGE------PGLDGIPG-------- 212
           G    PG+ G+ GP+G+ G PG   + G  GR G PG+       GLDG PG        
Sbjct: 618 GFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPP 677

Query: 213 -RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G+ G  G  G  G  GIPG  G +G KG+ G +G++G+ G  G  G P 
Sbjct: 678 GFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPG 729



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 72/132 (54%), Gaps = 12/132 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG--- 194
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q +PG++G +G  G MG PG  G   
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKG 570

Query: 195 LDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTN------GEKGMTG 245
           L G  GLPG PG  GIPG     G  G PG+ GL G +G PG  G        GE G  G
Sbjct: 571 LKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLG 630

Query: 246 PRGNRGKSGING 257
           P G RG  GI G
Sbjct: 631 PEGERGIPGIRG 642



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 88/192 (45%), Gaps = 27/192 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   QG       +   G +G  GQKG  G  G  G+KGE G++G  G +G  GP G+PG
Sbjct: 802 LKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPG 861

Query: 156 D---EGKRGPKGDMGYPGPQG------------------------IPGDEGKRGPKGDMG 188
           +    G  G KG+ G PGP G                        +PG  G RGP G  G
Sbjct: 862 EVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQG 921

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+ G  G DGL GE G+ G  G  G  G  G  GL GK G PG  G  G+ G+ G  G
Sbjct: 922 PKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPG 981

Query: 249 NRGKSGINGVPG 260
           + G  G+ G PG
Sbjct: 982 STGDRGLPGEPG 993



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 92/184 (50%), Gaps = 39/184 (21%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IGA GE+G +G+ G+KG     G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 802 LKGTQGEEGPIGAFGELGPRGKPGQKG---YAGEPGPEGLKGEVGDQGNIGKIGETGPVG 858

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
           +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 859 LPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG 918

Query: 213 RN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGING 257
                G  G  G DGL G+ GI G  G  G++G  GP            RG +GK G+ G
Sbjct: 919 SQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQG 978

Query: 258 VPGT 261
           +PG+
Sbjct: 979 LPGS 982



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 89/198 (44%), Gaps = 25/198 (12%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQG 152
            ++   G    T    P G+ G  GQ+G  G    KG++G  GE G +G PG +G  GP+G
Sbjct: 1087 IIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKG 1146

Query: 153  IPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGPKGDMGYPGR----------- 192
              G  G  G  G M         GY G QG PG  G  GPKG+ GYPG            
Sbjct: 1147 ARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPR 1206

Query: 193  --IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
               G  G  G  GEPG +G  G  G+ G+ G  G  G  G PG  G  G KG  G  GN+
Sbjct: 1207 GEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNK 1266

Query: 251  GKSGINGVPGTPAICAYK 268
            GK G  G  G P I   +
Sbjct: 1267 GKKGAPGPSGKPGIPGLQ 1284



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 74/140 (52%), Gaps = 3/140 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G  G+ G  GA G  GVKG  G  G+PG+ GP G QG+PG  G +G +G  G  G 
Sbjct: 1317 PGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGD 1376

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG  GD G +G  G+ G     GL G  G PG  G +G  G  G+ G  G  G  G  G 
Sbjct: 1377 QGPCGDPGLKGQPGEYGV---QGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGP 1433

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G  G  G TGPRG +G
Sbjct: 1434 LGREGIIGPTGRTGPRGEKG 1453



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 105/268 (39%), Gaps = 78/268 (29%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           +   G+        P G  GP G +G IG+ GE G  G  GE+G PG+ G  G    QG 
Sbjct: 593 IGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGF 652

Query: 154 PGDEGKRGPKGDMGYPG------------------------PQGIPG------------- 176
           PGD G RGP G  G PG                        P GIPG             
Sbjct: 653 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGI 712

Query: 177 --DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------------- 217
             D+G++G  G++G PG  G  G  GLPG PG+ G  G +G                   
Sbjct: 713 KGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGF 772

Query: 218 ----GIPGKDGLPGKDGIPGT---------NGTNGEK------GMTGPRGNRGKSGINGV 258
               GIPG++G  G  G+ G           GT GE+      G  GPRG  G+ G  G 
Sbjct: 773 PGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGE 832

Query: 259 PGTPAICAYKRESCSLLPNSETSQLLIP 286
           PG   +     +  ++    ET  + +P
Sbjct: 833 PGPEGLKGEVGDQGNIGKIGETGPVGLP 860



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 84/180 (46%), Gaps = 33/180 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G KG +G +G  G   +KG +GE+G  G  G  GP+G PG       KG  G 
Sbjct: 779 PGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQ------KGYAGE 832

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP+G+      +G  GD G  G+IG  G  GLPGE G+ G  G  G  G PG  G  G+
Sbjct: 833 PGPEGL------KGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGE 886

Query: 229 DGI------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+                  PG  G  G  G  GP+G RG  G +G+ G   I   K E
Sbjct: 887 KGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGE 946



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 9/113 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY 168
            PG+QGP   KGE G  G+ G++G+RG +GA G  GP   PG +G PG+ G +G  G  G+
Sbjct: 1347 PGIQGP---KGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGF 1403

Query: 169  PGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            PGP+G  GD    G  GPKG +G+ G  G  GR+G+ G  G  G  G  G  G
Sbjct: 1404 PGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGEKGFRG 1456



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 88/182 (48%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-------------------- 152
           GL G  G KGE G  GE+G  G  G+KGA G+ GPPG +G                    
Sbjct: 708 GLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPP 767

Query: 153 ----------IPGDEGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                     IPG  G  GPKG +G    PGP G+ G +G+ GP G  G  G  G  G+ 
Sbjct: 768 GPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQK 827

Query: 200 GLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  GEPG +G+ G  G  G  GK       GLPG+ G+ G+ G  GE+G  GP G +G+ 
Sbjct: 828 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEK 887

Query: 254 GI 255
           G+
Sbjct: 888 GV 889



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            G QGP G  G  G  GE GV+G  G +G PG  GP G  GI G  G +GP G  G  GP 
Sbjct: 1375 GDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPL 1434

Query: 172  --QGIPGDEGKRGPKGDMGYPGR 192
              +GI G  G+ GP+G+ G+ G 
Sbjct: 1435 GREGIIGPTGRTGPRGEKGFRGE 1457


>gi|332252179|ref|XP_003275234.1| PREDICTED: macrophage receptor MARCO isoform 1 [Nomascus
           leucogenys]
          Length = 495

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 100/286 (34%), Positives = 132/286 (46%), Gaps = 34/286 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +GE+G KG  G++GP G  G         +PG +G RG K
Sbjct: 180 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGDKGDLGLPGSKGDRGMK 239

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRN--- 214
           GD   MG PG QG  GD G  GP G  G+PG  G  G+ GL   PG PG  G PG     
Sbjct: 240 GDAGVMGPPGAQGSKGDSGSPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 299

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G PG  GLPG  G PG  G  G KG TG +G +G+ G +GVPG   +   +      
Sbjct: 300 GSAGSPGSAGLPGSPGSPGAAGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQGSPGLA 359

Query: 275 LPNSETSQLLIPPTIVGSEHIFSSSPIVVREGD-------NVRLRCVATGHPKPSIIWKT 327
            P         P    G + +  SS     +G+       +V +R V + +   + ++ +
Sbjct: 360 GPKGAPG----PVGRKGDQGVKGSSGEQGVKGEKGERGENSVSVRIVGSSNRGRAEVYYS 415

Query: 328 SENKPITLGSWKDS--AVASSTLNFTR---INRINMGAYMCLADNV 368
                I    W+DS   V    L ++R   +N +  G      DNV
Sbjct: 416 GTWGTICDDEWQDSDATVFCRMLGYSRGRALNNVGAGTGQIWLDNV 461



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/151 (45%), Positives = 81/151 (53%), Gaps = 12/151 (7%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYPGPQ---GIPGDEGK 180
           KGE G++G +G  G  G  G PGPQ   G  GD G  GPKG+ G  G +   G+PG +G 
Sbjct: 176 KGEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGDKGDLGLPGSKGD 235

Query: 181 RGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
           RG KGD   MG PG  G  G  G PG PGL G PG  G  G PG  G+PG    PG  G 
Sbjct: 236 RGMKGDAGVMGPPGAQGSKGDSGSPGPPGLAGFPGAKGDQGQPGLQGVPGP---PGAVGH 292

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G KG  G  G+ G +G+ G PG+P     K
Sbjct: 293 PGAKGEPGSAGSPGSAGLPGSPGSPGAAGLK 323



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G  G  G  G +G++G PG+ G PGP G  G  G +G  G  G PG
Sbjct: 247 PPGAQGSKGDSGSPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPG 306

Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G+PG  G       +G KGD G  G+ G  G  G+PG  G+ G  G  G+ G  G  G
Sbjct: 307 SAGLPGSPGSPGAAGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPG 366

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G+ G  G  G++GE+G+ G +G RG++ ++
Sbjct: 367 PVGRKGDQGVKGSSGEQGVKGEKGERGENSVS 398


>gi|71903419|ref|YP_280222.1| collagen-like surface protein [Streptococcus pyogenes MGAS6180]
 gi|71802514|gb|AAX71867.1| collagen-like surface protein [Streptococcus pyogenes MGAS6180]
          Length = 422

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/183 (44%), Positives = 99/183 (54%), Gaps = 21/183 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG---------EIGAKGE---MGVKGERGEKGAPG 143
           L    G   +  E  P G QGP G++G         E GA+G    MG  GERGEKG PG
Sbjct: 147 LAGKAGEAGAKGETGPAGPQGPRGEQGPQGLPGKDGEAGAQGPAGPMGPAGERGEKGEPG 206

Query: 144 VVGPPGPQGIPGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                  QG  GD G+ GP   +G+ G  GP G  G+ G  GP G  G  G+ GL G+DG
Sbjct: 207 T------QGAKGDRGETGPVGPRGERGEAGPAGKDGERGPVGPAGKDGQNGQDGLPGKDG 260

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G DG+PG++G DG  GKDGLPGKDG  G +G +G  G  G  G  GK G +G PG
Sbjct: 261 KDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGLPGKDGKDGQPG 320

Query: 261 TPA 263
            PA
Sbjct: 321 KPA 323



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 87/154 (56%), Gaps = 9/154 (5%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGI 153
           QG      E    G  GP+G  GE G KGE G +G +G++G  G VGP       GP G 
Sbjct: 175 QGLPGKDGEAGAQGPAGPMGPAGERGEKGEPGTQGAKGDRGETGPVGPRGERGEAGPAGK 234

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G+ G  GP G  G  G  G+PG +GK G  G  G PG+ G DG++G  G PG DG  G+
Sbjct: 235 DGERGPVGPAGKDGQNGQDGLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQ 294

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           +G DG+PGKD   GKDG+PG +G +G+ G   P+
Sbjct: 295 DGKDGLPGKD---GKDGLPGKDGKDGQPGKPAPK 325



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 6/142 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G++G  G  G  G++GERGE+G  G+ G  G  G  G+ G  GP+G  G  GPQG+PG +
Sbjct: 122 GEQGPTGPAGPRGLQGERGEQGPTGLAGKAGEAGAKGETGPAGPQGPRGEQGPQGLPGKD 181

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G+ G +G  G    +G  G  G  GEPG  G  G  G  G  G  G   + G  G  G +
Sbjct: 182 GEAGAQGPAGP---MGPAGERGEKGEPGTQGAKGDRGETGPVGPRG---ERGEAGPAGKD 235

Query: 239 GEKGMTGPRGNRGKSGINGVPG 260
           GE+G  GP G  G++G +G+PG
Sbjct: 236 GERGPVGPAGKDGQNGQDGLPG 257



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 73/156 (46%), Gaps = 12/156 (7%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G+ G  GERGE+G  G  GP GP+G+ G +G +G +G+            +G  GP G  
Sbjct: 86  GQDGRNGERGEQGPTGPTGPAGPRGLQGLQGLQGERGE------------QGPTGPAGPR 133

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  G  G  G  GL G+ G  G  G  G  G  G  G  G  G+PG +G  G +G  GP 
Sbjct: 134 GLQGERGEQGPTGLAGKAGEAGAKGETGPAGPQGPRGEQGPQGLPGKDGEAGAQGPAGPM 193

Query: 248 GNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
           G  G+ G  G PGT      + E+  + P  E  + 
Sbjct: 194 GPAGERGEKGEPGTQGAKGDRGETGPVGPRGERGEA 229


>gi|355745425|gb|EHH50050.1| hypothetical protein EGM_00812 [Macaca fascicularis]
          Length = 1714

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 94/167 (56%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG   P G  GIPG 
Sbjct: 1230 VGVPGLRGATGQQGPPGEPG---DQGEQGLKGERGCEGHKGKKGAPG---PSGKAGIPGL 1283

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G  GPKG  GY G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+
Sbjct: 1284 QGLPGPKGIQGYHGADGILGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGL 1343

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G PG  G  G+ G+PG  G  G +G  G +G++G  G  G+ G P 
Sbjct: 1344 PGSPGIQGPKGEQGLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQPG 1390



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 105/194 (54%), Gaps = 9/194 (4%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+  QG   +  E    G +GP G  G+ G  GE GV+G+ G +G PG  G    +G+PG
Sbjct: 934  LLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQGKPGLQGLPGSTGD---RGLPG 990

Query: 156  DEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            + G RG +GD+G PG  GI   PG EG+ G +G+ G  G +G  G  G PGEPGL G PG
Sbjct: 991  EPGLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDVGPAGSVGEPGEPGLRGEPG 1050

Query: 213  RNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
              G +G+ GKDGL G     G+PG +G  G+ G+ G  G  G+SG  G+PG   I     
Sbjct: 1051 APGEEGLQGKDGLKGASGGRGLPGEDGEKGDMGLPGIIGPLGRSGQMGLPGPEGIVGIPG 1110

Query: 270  ESCSLLPNSETSQL 283
            +   L    +  Q+
Sbjct: 1111 QRGRLGKKGDKGQI 1124



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/159 (45%), Positives = 93/159 (58%), Gaps = 9/159 (5%)

Query: 111  PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKG 164
            PPG QGP GQ+G  G  G   E G++G +GEKG  G  GP G     G PG+ G +G  G
Sbjct: 916  PPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQGKPG 975

Query: 165  DMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
              G PG    +G+PG+ G RG +GD+G PG +G++G  G+ GE GL G PG  G  G  G
Sbjct: 976  LQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDVGPAG 1035

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G PG+ G+ G  G  GE+G+ G  G +G SG  G+PG
Sbjct: 1036 SVGEPGEPGLRGEPGAPGEEGLQGKDGLKGASGGRGLPG 1074



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 101/185 (54%), Gaps = 18/185 (9%)

Query: 96   LVAMQGFCNSTKEYC---PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L  +QG      E     PPG++G  G +GE GAKG++G  G  GE G PG+ G PG   
Sbjct: 994  LRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDVGPAGSVGEPGEPGLRGEPG--- 1050

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDG 209
             PG+EG +G  G  G  G +G+PG++G+   KGDMG PG IG  GR    GLPG  G+ G
Sbjct: 1051 APGEEGLQGKDGLKGASGGRGLPGEDGE---KGDMGLPGIIGPLGRSGQMGLPGPEGIVG 1107

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGTPA 263
            IPG+ G  G  G  G  G  G  G+ G+ G+ G +GP+G RG        G+ G  G P 
Sbjct: 1108 IPGQRGRLGKKGDKGQIGPTGEVGSRGSPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPG 1167

Query: 264  ICAYK 268
            I  Y+
Sbjct: 1168 IPGYR 1172



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 93/178 (52%), Gaps = 19/178 (10%)

Query: 112  PGLQGPIGQKGEIGAKGE----------------MGVKGERGEKGAPGVVGPPGPQGIPG 155
            PGL G  G KGE G  GE                +G +GERGE GA G  G  G  G+ G
Sbjct: 1178 PGLSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRG 1237

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
              G++GP G+ G  G QG+ G+ G  G KG  G PG  G  G  GL G PG  GI G +G
Sbjct: 1238 ATGQQGPPGEPGDQGEQGLKGERGCEGHKGKKGAPGPSGKAGIPGLQGLPGPKGIQGYHG 1297

Query: 216  MDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             DGI   PGK G PGK G+PG  G+ G  G+ G  G  G  G +G+PG+P I   K E
Sbjct: 1298 ADGILGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGE 1355



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 92/180 (51%), Gaps = 27/180 (15%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +GV G RG   ++G PG  G  G QG+ G+ G  G KG  G PGP
Sbjct: 1215 QGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGCEGHKGKKGAPGP 1274

Query: 172  QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G   IPG +G  GPKG  GY         PG++G  G+ GL   PG+ G PGR G+ G 
Sbjct: 1275 SGKAGIPGLQGLPGPKGIQGYHGADGILGNPGKVGPPGKQGL---PGIRGSPGRTGLAGA 1331

Query: 220  PGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G+ G  G+PG+ G  G K         G+ G RG+RG  G  G  G P +     E
Sbjct: 1332 PGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQPGE 1391



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 90/178 (50%), Gaps = 12/178 (6%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S  E   PGL+G  G  GE G +G+ G+KG  G +G PG  G  G  G+PG  G  
Sbjct: 1032 GPAGSVGEPGEPGLRGEPGAPGEEGLQGKDGLKGASGGRGLPGEDGEKGDMGLPGIIGPL 1091

Query: 161  GPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G  G MG PGP+   GIPG  G+ G KGD G  G  G  G  G PG+ G  G  G  G  
Sbjct: 1092 GRSGQMGLPGPEGIVGIPGQRGRLGKKGDKGQIGPTGEVGSRGSPGKIGKSGPKGARGTR 1151

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
            G  G  GL G D         GE G+ G RG++G+ G++G+PG      Y  E  ++L
Sbjct: 1152 GAVGHLGLMGPD---------GEPGIPGYRGHQGQPGLSGLPGPKGEKGYPGEDSTVL 1200



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 97/196 (49%), Gaps = 42/196 (21%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGE------------MGVKGERGEKGAPGVVGPPGPQGI-- 153
            E  P GL+G +G +G IG  GE             G  GE+GE+G+PG +GP G +G+  
Sbjct: 832  EPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGTTGSIGEKGERGSPGPLGPQGEKGVMG 891

Query: 154  ----------------PGDEGKR------GPKGDMGYPGPQGIPGD---EGKRGPKGDMG 188
                            PG  G R      GPKG  G  GP G+ G+   +G +G KGD G
Sbjct: 892  YPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQG 951

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTG 245
              G  GL G+ G PGE G+ G PG  G+ G  G  GLPG+ G+ G     G  GE G+ G
Sbjct: 952  KRGPHGLIGKTGNPGERGVQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGIEG 1011

Query: 246  PRGNRGKSGINGVPGT 261
            P G  G+SG+ G PG 
Sbjct: 1012 PPGIEGESGLQGEPGA 1027



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 89/187 (47%), Gaps = 39/187 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGDM 166
           GL GP G +G+ G KG  G+ G RGE+G PG  G       PG QG+ G EG  GPKG  
Sbjct: 558 GLMGPPGMQGDKGLKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGHPGPKGAR 617

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGE------PGLDGIPG----- 212
           G+    G PG+ G+ GP+G+ G P   G+ G  GR G PG+       GLDG PG     
Sbjct: 618 GF---IGSPGETGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGT 674

Query: 213 --------RN--------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                   R         G  GIPG  GL G  G+PG  G  GE+G  G  G  G  G  
Sbjct: 675 GPPGFPGLRGSVGPVGPIGPAGIPGPVGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDK 734

Query: 257 GVPGTPA 263
           G  G P 
Sbjct: 735 GAVGLPG 741



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 89/164 (54%), Gaps = 12/164 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQG  G  G+ G  GE G++G +G+ G PG +G  GP GI G+ G +G  G  G  GP
Sbjct: 974  PGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDVGP 1033

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIP-------- 220
             G  G+ G+ G +G+ G PG  GL G+DGL G  G  G+PG +G     G+P        
Sbjct: 1034 AGSVGEPGEPGLRGEPGAPGEEGLQGKDGLKGASGGRGLPGEDGEKGDMGLPGIIGPLGR 1093

Query: 221  -GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ GLPG +GI G  G  G  G  G +G  G +G  G  G+P 
Sbjct: 1094 SGQMGLPGPEGIVGIPGQRGRLGKKGDKGQIGPTGEVGSRGSPG 1137



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 95/212 (44%), Gaps = 45/212 (21%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            V  QG      E  P GL G +G  G IG KGE G  G  G +G  GV+           
Sbjct: 842  VGDQGNIGKIGETGPVGLPGEVGTTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGP 901

Query: 146  -------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG---DEGKRGPKGDMGY 189
                         GPPG QG  G  G RGP G +G  G QG  G   D+GKRGP G +G 
Sbjct: 902  IGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGK 961

Query: 190  ---PGRIGLDGR------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
               PG  G+ G+             GLPGEPGL G+ G  G  G  G +G PG +G  G 
Sbjct: 962  TGNPGERGVQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGIEGPPGIEGESGL 1021

Query: 235  NGTNGEKGMTGPRGN---RGKSGINGVPGTPA 263
             G  G KG  GP G+    G+ G+ G PG P 
Sbjct: 1022 QGEPGAKGDVGPAGSVGEPGEPGLRGEPGAPG 1053



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 85/165 (51%), Gaps = 9/165 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------QGIPGDEGKRGPKGDM 166
            G  G +G  G++G  G+ G+ G RG  G  G+ G PGP       G+PG  G +GPKG+ 
Sbjct: 1297 GADGILGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQ 1356

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G PG  GI G  G RG +GD G  G  GL G+   PGE G+ G+ G  G  G  G +G  
Sbjct: 1357 GLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQ---PGEYGVQGLTGFQGFPGPKGPEGDA 1413

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  GI G  G  G++G TGP G  G  G  G  G      ++ E+
Sbjct: 1414 GIVGISGPKGPIGQRGNTGPLGREGIIGPTGRTGPRGEKGFRGET 1458



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 104/235 (44%), Gaps = 57/235 (24%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAK---------------GEMGVKGERGEKGAPGV 144
            +G    T E    G  G IG+ G  GA+               GE G+ G RG +G PG+
Sbjct: 1121 KGQIGPTGEVGSRGSPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGL 1180

Query: 145  VGPPGPQGIPG----------------------DEGKRGPKGDMGYPGPQGIP---GDEG 179
             G PGP+G  G                      ++G+RG  G  GY G  G+P   G  G
Sbjct: 1181 SGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRGATG 1240

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI-------- 231
            ++GP G+ G  G  GL G  G  G  G  G PG +G  GIPG  GLPG  GI        
Sbjct: 1241 QQGPPGEPGDQGEQGLKGERGCEGHKGKKGAPGPSGKAGIPGLQGLPGPKGIQGYHGADG 1300

Query: 232  ----PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
                PG  G  G++G+ G RG+ G++G+ G PG P +     +  S LP S   Q
Sbjct: 1301 ILGNPGKVGPPGKQGLPGIRGSPGRTGLAGAPGPPGV-----KGSSGLPGSPGIQ 1350



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q +PG++G +G  G MG PG  G  G
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAVPGEKGDQGLSGLMGPPGMQGDKG 570

Query: 198 RDGLPGEPGL---DGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTN------GEKGMTG 245
             G PG PGL    GIPG     G  G PG+ GL G +G PG  G        GE G  G
Sbjct: 571 LKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGHPGPKGARGFIGSPGETGQLG 630

Query: 246 PRGNRGKSGING 257
           P G RG  GI G
Sbjct: 631 PEGERGIPGIRG 642



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 75/140 (53%), Gaps = 6/140 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
           PGL GP G KG+ G      V GE+G++G  G++GPPG QG       PG  G RG +G 
Sbjct: 527 PGLPGPKGPKGDPGFSPGQAVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLRGEQGI 586

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G+ G  G PG  G++G  G  G+PG  G  G  G PGE G  G  G  G+ GI GK G 
Sbjct: 587 PGFAGNIGSPGYPGRQGLAGPEGHPGPKGARGFIGSPGETGQLGPEGERGIPGIRGKKGF 646

Query: 226 PGKDGIPGTNGTNGEKGMTG 245
            G+ G PG  G  G  G+ G
Sbjct: 647 KGRQGFPGDFGDRGPAGLDG 666



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 85/183 (46%), Gaps = 21/183 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L    G      E   PG  G IG  G  G +G  G +G  G KGA G +G PG  G  G
Sbjct: 571 LKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGHPGPKGARGFIGSPGETGQLG 630

Query: 156 DEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------------------IG 194
            EG+R   G +G  G+ G QG PGD G RGP G  G PG                   +G
Sbjct: 631 PEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVG 690

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G+PG  GL G  G  G+ G  G+ G  G+ G PG  G  G  G+ GP+G RGK G
Sbjct: 691 PIGPAGIPGPVGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPQGMRGKPG 750

Query: 255 ING 257
            +G
Sbjct: 751 PSG 753



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 91/184 (49%), Gaps = 39/184 (21%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IG  GE+G +G+ G+K   G  G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 802 LKGTQGEEGPIGPFGELGPRGKPGQK---GYAGEPGPEGLKGEVGDQGNIGKIGETGPVG 858

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
           +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 859 LPGEVGTTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG 918

Query: 213 RN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGING 257
                G  G  G DGL G+ GI G  G  G++G  GP            RG +GK G+ G
Sbjct: 919 SQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGVQGKPGLQG 978

Query: 258 VPGT 261
           +PG+
Sbjct: 979 LPGS 982



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 74/140 (52%), Gaps = 3/140 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G  G+ G  GA G  GVKG  G  G+PG+ GP G QG+PG  G +G +G  G  G 
Sbjct: 1317 PGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGTRGHRGAQGD 1376

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG  G+ G +G  G+ G     GL G  G PG  G +G  G  G+ G  G  G  G  G 
Sbjct: 1377 QGPCGEPGLKGQPGEYGV---QGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGQRGNTGP 1433

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G  G  G TGPRG +G
Sbjct: 1434 LGREGIIGPTGRTGPRGEKG 1453



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 98/249 (39%), Gaps = 75/249 (30%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           +   G+        P G  GP G +G IG+ GE G  G  GE+G PG+ G  G    QG 
Sbjct: 593 IGSPGYPGRQGLAGPEGHPGPKGARGFIGSPGETGQLGPEGERGIPGIRGKKGFKGRQGF 652

Query: 154 PGDEGKRGPKGDMGYPG------------------------PQGIPG------------- 176
           PGD G RGP G  G PG                        P GIPG             
Sbjct: 653 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPVGLSGNKGLPGI 712

Query: 177 --DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------------- 217
             D+G++G  G++G PG  G  G  GLPG  G+ G PG +G                   
Sbjct: 713 KGDKGEQGTAGELGEPGYPGDKGAVGLPGPQGMRGKPGPSGQTGDPGLQGPSGPPGPEGF 772

Query: 218 ----GIPGKDGLPGKDGIPGT---------NGTNGEKGMTGPRGN---RGKSGINGVPGT 261
               GIPG++G  G  G+ G           GT GE+G  GP G    RGK G  G  G 
Sbjct: 773 PGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGE 832

Query: 262 PAICAYKRE 270
           P     K E
Sbjct: 833 PGPEGLKGE 841



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 61/110 (55%), Gaps = 3/110 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+QGP G++G  G  G  G +G RG +G  G  G PG +G PG+ G +G  G  G+PGP
Sbjct: 1347 PGIQGPKGEQGLPGQPGIQGTRGHRGAQGDQGPCGEPGLKGQPGEYGVQGLTGFQGFPGP 1406

Query: 172  QGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            +G  GD    G  GPKG +G  G  G  GR+G+ G  G  G  G  G  G
Sbjct: 1407 KGPEGDAGIVGISGPKGPIGQRGNTGPLGREGIIGPTGRTGPRGEKGFRG 1456



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 90/208 (43%), Gaps = 51/208 (24%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGA------KGEMGVKGERGEKGAPG---VVGPPG 149
           ++G         P G+ GP+G  G  G       KGE G  GE GE G PG    VG PG
Sbjct: 682 LRGSVGPVGPIGPAGIPGPVGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPG 741

Query: 150 PQGIPGDEGKRGPKGD------------------MGYPG---PQG--------------- 173
           PQG+ G  G  G  GD                  +G PG   P+G               
Sbjct: 742 PQGMRGKPGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPG 801

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGLPG 227
           + G +G+ GP G  G  G  G  G+ G  GEPG +G+ G  G  G  GK       GLPG
Sbjct: 802 LKGTQGEEGPIGPFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPG 861

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           + G  G+ G  GE+G  GP G +G+ G+
Sbjct: 862 EVGTTGSIGEKGERGSPGPLGPQGEKGV 889



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 66/133 (49%), Gaps = 21/133 (15%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPG 212
           KRGP+G  G  G  G+PG  G +GPKGD G+      PG  G  G  GL G PG+ G   
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAVPGEKGDQGLSGLMGPPGMQG--- 567

Query: 213 RNGMDGIPGKDGLPGKDGIP------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             G+ G PG  GL G+ GIP      G+ G  G +G+ GP G+ G  G  G  G+P    
Sbjct: 568 DKGLKGHPGLPGLRGEQGIPGFAGNIGSPGYPGRQGLAGPEGHPGPKGARGFIGSPG--- 624

Query: 267 YKRESCSLLPNSE 279
              E+  L P  E
Sbjct: 625 ---ETGQLGPEGE 634



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 96/249 (38%), Gaps = 67/249 (26%)

Query: 86  VWLNAYSRIPLV----AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK-- 139
           V L+    +P +      QG      E   PG +G +G  G  G +G+ G  G+ G+   
Sbjct: 701 VGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPQGMRGKPGPSGQTGDPGL 760

Query: 140 ----------------GAPGVVGPPGPQGIPGD------------EGKRGPKGDMGYPGP 171
                           G PG  GP GP+G+ G+            +G+ GP G  G  GP
Sbjct: 761 QGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGP 820

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G PG +G  G  G  G  G +G  G  G  GE G  G+PG  G  G  G+ G   + G 
Sbjct: 821 RGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGTTGSIGEKG---ERGS 877

Query: 232 PGTNGTNGEKGM------------------------------TGPRGNRGKSGINGVPGT 261
           PG  G  GEKG+                               GP+G RG  G +G+ G 
Sbjct: 878 PGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGE 937

Query: 262 PAICAYKRE 270
             I   K E
Sbjct: 938 QGIQGAKGE 946


>gi|326925148|ref|XP_003208782.1| PREDICTED: collagen alpha-1(XXIV) chain-like [Meleagris gallopavo]
          Length = 1509

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/173 (47%), Positives = 96/173 (55%), Gaps = 24/173 (13%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL+GPIGQ+G   E G  GE G+KGERG +G     G  G  G  GIPG  G  G KG 
Sbjct: 1028 PGLRGPIGQQGPPGEPGELGEQGLKGERGSEGPTGKKGATGQAGKPGIPGKPGPAGQKGA 1087

Query: 166  MGYPGPQGIPGD------EGKRGPKGDMGYPGRIGLDGR------DGLPGEPGLDGIPGR 213
            +GYPGP+GIPG+       GK GPKG+ G PG  GL G        GLPG PG  G PG 
Sbjct: 1088 VGYPGPEGIPGNPGKPGLPGKPGPKGNKGSPGLAGLAGYPGARGPKGLPGMPGPMGAPGL 1147

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTN------GEKGMTGPRGNRGKSGINGVPG 260
             G +G+ G  G  GK G PG+ G        G KG TG  G++G  G+ G PG
Sbjct: 1148 KGAEGLQGHPGKRGKRGHPGSQGDQGPAGEVGAKGQTGEDGDQGLMGLQGFPG 1200



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 81/153 (52%), Gaps = 6/153 (3%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           +GP G  G +G  G  G+KGERG+ G  G  G  G  G PG  G +G  G+ G PG  GI
Sbjct: 793 RGPRGIDGPLGEPGTQGIKGERGDPGKKGTSGLIGKAGNPGQRGDQGALGEPGLPGEDGI 852

Query: 175 ------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                  G+ G++GP G+ G  G +G  G  G  GEPG+ GIPG  G  G PG+ G  GK
Sbjct: 853 QGRDGPKGEPGEQGPHGEAGEKGEMGTPGNAGPSGEPGIMGIPGPEGRPGNPGQRGRLGK 912

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G+ GE G  G  G  GK+G  G  GT
Sbjct: 913 KGEKGQLGSPGEIGPAGDSGQLGKTGPKGARGT 945



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/138 (44%), Positives = 75/138 (54%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            E G +GE G +G +G  G PG+ GP G QG PG+ G+ G +G  G  G +G  G +G  G
Sbjct: 1009 ERGDRGEPGDEGYKGHIGLPGLRGPIGQQGPPGEPGELGEQGLKGERGSEGPTGKKGATG 1068

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
              G  G PG+ G  G+ G  G PG +GIPG  G  G+PGK G  G  G PG  G  G  G
Sbjct: 1069 QAGKPGIPGKPGPAGQKGAVGYPGPEGIPGNPGKPGLPGKPGPKGNKGSPGLAGLAGYPG 1128

Query: 243  MTGPRGNRGKSGINGVPG 260
              GP+G  G  G  G PG
Sbjct: 1129 ARGPKGLPGMPGPMGAPG 1146



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 93/217 (42%), Gaps = 69/217 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDM 166
           G QGP G +GE+G  G +G  G RG+ G  G VG PGP+G+ G++      GK G  G  
Sbjct: 665 GPQGPKGVEGEVGPAGPIGAVGPRGKPGQKGYVGGPGPEGLKGEQGDQGNIGKTGEAGSA 724

Query: 167 GYP---GPQGIPGDEGKRGPKGDMGYPG-------------------------------- 191
           G P   GP G  G++G+RG +G +G PG                                
Sbjct: 725 GLPGETGPSGSLGEKGERGSQGPVGPPGEKGVMGYLGPPGGPGSVGPEGLPGPSGTRGPP 784

Query: 192 -------RIGLDGRDGLPGEPGLDGI---------------------PGRNGMDGIPGKD 223
                  R G  G DG  GEPG  GI                     PG+ G  G  G+ 
Sbjct: 785 GPQGPKGRRGPRGIDGPLGEPGTQGIKGERGDPGKKGTSGLIGKAGNPGQRGDQGALGEP 844

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           GLPG+DGI G +G  GE G  GP G  G+ G  G PG
Sbjct: 845 GLPGEDGIQGRDGPKGEPGEQGPHGEAGEKGEMGTPG 881



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 69/142 (48%), Gaps = 3/142 (2%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           RG +G  G +G PG QGI G+ G  G KG  G  G  G PG  G +G  G+ G PG  G+
Sbjct: 793 RGPRGIDGPLGEPGTQGIKGERGDPGKKGTSGLIGKAGNPGQRGDQGALGEPGLPGEDGI 852

Query: 196 DGRDGLPGEPGLDGI---PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            GRDG  GEPG  G     G  G  G PG  G  G+ GI G  G  G  G  G RG  GK
Sbjct: 853 QGRDGPKGEPGEQGPHGEAGEKGEMGTPGNAGPSGEPGIMGIPGPEGRPGNPGQRGRLGK 912

Query: 253 SGINGVPGTPAICAYKRESCSL 274
            G  G  G+P       +S  L
Sbjct: 913 KGEKGQLGSPGEIGPAGDSGQL 934



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 81/185 (43%), Gaps = 36/185 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G       +GE+G+ G  G  GPPG +G  G  G  G  G +GYPG 
Sbjct: 409 PGLPGPKGPKGDPGFSPGQAKRGEKGDPGPIGFSGPPGIKGQKGVPGMAGNVGAVGYPGR 468

Query: 172 QGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------ 222
           QG+ G EG  GPKG  G+   PG  G  G +G  G PG  G  G  G  G PG       
Sbjct: 469 QGLAGPEGNPGPKGARGFIGPPGVAGQRGSEGERGIPGFHGKRGPKGRKGFPGDFGDRGP 528

Query: 223 ---------------------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                                       GL G  GIPG  G  G  G  G +G++G  G+
Sbjct: 529 PGPDGNPGIVGGVGPPGFPGLRGDVGPAGLSGPSGIPGPMGLPGNMGQPGMKGDKGDHGL 588

Query: 256 NGVPG 260
            G PG
Sbjct: 589 AGDPG 593



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 73/155 (47%), Gaps = 9/155 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------QGIPGDEGKRGP 162
            PG  GP G KG  G  G  G  G RG KG PG+ GP G          QG PG  GKRG 
Sbjct: 1106 PGKPGPKGNKGSPGLAGLAGYPGARGPKGLPGMPGPMGAPGLKGAEGLQGHPGKRGKRGH 1165

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G  G  GP G  G +G+ G  GD G  G  G  G  G  G+ GL GI G  G  G  G 
Sbjct: 1166 PGSQGDQGPAGEVGAKGQTGEDGDQGLMGLQGFPGPKGPAGDVGLIGILGPKGPTGQIGY 1225

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  GK+GI G  G  G +G  G RG  G  G  G
Sbjct: 1226 IGPVGKEGITGPTGRPGPRGEKGTRGEMGPQGPQG 1260



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 90/198 (45%), Gaps = 45/198 (22%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------G 158
           P GL GP G  G +G  G MG  G +G+KG  G+ G PG QG PGD+            G
Sbjct: 555 PAGLSGPSGIPGPMGLPGNMGQPGMKGDKGDHGLAGDPGDQGYPGDKGAPGSPGPPGIRG 614

Query: 159 KRGPKG---------------------DMGYP------GPQGIPGDEGKRGPK------G 185
           K GP+G                     D+G P      GP+G+ GD G  GP+      G
Sbjct: 615 KPGPQGKIGDPGSQGPLGPPGPEGFPGDIGVPGLNGPEGPKGLLGDRGSSGPQGPKGVEG 674

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           ++G  G IG  G  G PG+ G  G PG  G+ G  G  G  GK G  G+ G  GE G +G
Sbjct: 675 EVGPAGPIGAVGPRGKPGQKGYVGGPGPEGLKGEQGDQGNIGKTGEAGSAGLPGETGPSG 734

Query: 246 PRGNRGKSGINGVPGTPA 263
             G +G+ G  G  G P 
Sbjct: 735 SLGEKGERGSQGPVGPPG 752



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 83/182 (45%), Gaps = 39/182 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG +G +G     G +G KG  G VGP GP G  G  GK G KG +G PGP
Sbjct: 646 PGLNGPEGPKGLLGDRGS---SGPQGPKGVEGEVGPAGPIGAVGPRGKPGQKGYVGGPGP 702

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G+ G++G      D G  G+ G  G  GLPGE G  G  G  G  G  G  G PG+ G+
Sbjct: 703 EGLKGEQG------DQGNIGKTGEAGSAGLPGETGPSGSLGEKGERGSQGPVGPPGEKGV 756

Query: 232 ------------------PGTNGT------------NGEKGMTGPRGNRGKSGINGVPGT 261
                             PG +GT             G +G+ GP G  G  GI G  G 
Sbjct: 757 MGYLGPPGGPGSVGPEGLPGPSGTRGPPGPQGPKGRRGPRGIDGPLGEPGTQGIKGERGD 816

Query: 262 PA 263
           P 
Sbjct: 817 PG 818



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 94/241 (39%), Gaps = 85/241 (35%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-------- 164
            G+ GP G+ G  G +G +G KGE+G+ G+PG +GP G  G  G  G +G +G        
Sbjct: 893  GIPGPEGRPGNPGQRGRLGKKGEKGQLGSPGEIGPAGDSGQLGKTGPKGARGTQGPLGHP 952

Query: 165  -------------------------------DMGYPGP---------------------- 171
                                           + GYPG                       
Sbjct: 953  GGMGPGGELGIPGYGGHQGPAGPSGPPGPKGEKGYPGEDSTVLGPPGPIGEPGPTGERGD 1012

Query: 172  QGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            +G PGDEG          RGP G  G PG  G  G  GL GE G +G  G+ G  G  GK
Sbjct: 1013 RGEPGDEGYKGHIGLPGLRGPIGQQGPPGEPGELGEQGLKGERGSEGPTGKKGATGQAGK 1072

Query: 223  DGLPGK---------------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             G+PGK               +GIPG  G  G  G  GP+GN+G  G+ G+ G P     
Sbjct: 1073 PGIPGKPGPAGQKGAVGYPGPEGIPGNPGKPGLPGKPGPKGNKGSPGLAGLAGYPGARGP 1132

Query: 268  K 268
            K
Sbjct: 1133 K 1133



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 71/128 (55%), Gaps = 12/128 (9%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGD---MGYPGPQGIPGDEGK 180
           +G  G+ G  G  G PG+ GP GP+G PG    + KRG KGD   +G+ GP GI G +G 
Sbjct: 394 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAKRGEKGDPGPIGFSGPPGIKGQKGV 453

Query: 181 RGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            G  G+   +GYPGR GL G +G PG  G  G     G  G+ G+ G  G+ GIPG +G 
Sbjct: 454 PGMAGNVGAVGYPGRQGLAGPEGNPGPKGARGF---IGPPGVAGQRGSEGERGIPGFHGK 510

Query: 238 NGEKGMTG 245
            G KG  G
Sbjct: 511 RGPKGRKG 518



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 93/227 (40%), Gaps = 73/227 (32%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGD 165
            PG QGP G+ GE   KGEMG  G  G  G PG++G PGP+G PG+ G+RG       KG 
Sbjct: 862  PGEQGPHGEAGE---KGEMGTPGNAGPSGEPGIMGIPGPEGRPGNPGQRGRLGKKGEKGQ 918

Query: 166  MGYPG---PQGIPGDEGKRGPKG------------------------------------- 185
            +G PG   P G  G  GK GPKG                                     
Sbjct: 919  LGSPGEIGPAGDSGQLGKTGPKGARGTQGPLGHPGGMGPGGELGIPGYGGHQGPAGPSGP 978

Query: 186  -----DMGYPGR----------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                 + GYPG                  G  G  G PG+ G  G  G  G+ G  G+ G
Sbjct: 979  PGPKGEKGYPGEDSTVLGPPGPIGEPGPTGERGDRGEPGDEGYKGHIGLPGLRGPIGQQG 1038

Query: 225  LPGKDGIPGTNGTNGEKGMTGPRGNRG---KSGINGVPGTPAICAYK 268
             PG+ G  G  G  GE+G  GP G +G   ++G  G+PG P     K
Sbjct: 1039 PPGEPGELGEQGLKGERGSEGPTGKKGATGQAGKPGIPGKPGPAGQK 1085



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 59/114 (51%), Gaps = 12/114 (10%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------------PGRIGLDGRDGLPGEPG 206
           KRGP+G  G  G  G+PG  G +GPKGD G+            PG IG  G  G+ G+ G
Sbjct: 393 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAKRGEKGDPGPIGFSGPPGIKGQKG 452

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G+ G  G  G PG+ GL G +G PG  G  G  G  G  G RG  G  G+PG
Sbjct: 453 VPGMAGNVGAVGYPGRQGLAGPEGNPGPKGARGFIGPPGVAGQRGSEGERGIPG 506



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 85/218 (38%), Gaps = 57/218 (26%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGI 153
           V   G+        P G  GP G +G IG  G  G +G  GE+G PG     GP G +G 
Sbjct: 460 VGAVGYPGRQGLAGPEGNPGPKGARGFIGPPGVAGQRGSEGERGIPGFHGKRGPKGRKGF 519

Query: 154 PGDEGK------------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           PGD G                         RG  G  G  GP GIPG  G     G+MG 
Sbjct: 520 PGDFGDRGPPGPDGNPGIVGGVGPPGFPGLRGDVGPAGLSGPSGIPGPMGL---PGNMGQ 576

Query: 190 PGRIGLDGRDGLPGEPGLDGIPG---------RNGMDGIPGKDGLPGKD----------- 229
           PG  G  G  GL G+PG  G PG           G+ G PG  G  G             
Sbjct: 577 PGMKGDKGDHGLAGDPGDQGYPGDKGAPGSPGPPGIRGKPGPQGKIGDPGSQGPLGPPGP 636

Query: 230 -------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                  G+PG NG  G KG+ G RG+ G  G  GV G
Sbjct: 637 EGFPGDIGVPGLNGPEGPKGLLGDRGSSGPQGPKGVEG 674



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 58/109 (53%), Gaps = 6/109 (5%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIP 154
             +QG      +   PG QG  G  GE+GAKG+ G  G++G  G  G  GP GP    G+ 
Sbjct: 1152 GLQGHPGKRGKRGHPGSQGDQGPAGEVGAKGQTGEDGDQGLMGLQGFPGPKGPAGDVGLI 1211

Query: 155  GDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            G  G +GP G +GY GP   +GI G  G+ GP+G+ G  G +G  G  G
Sbjct: 1212 GILGPKGPTGQIGYIGPVGKEGITGPTGRPGPRGEKGTRGEMGPQGPQG 1260



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 58/113 (51%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G  GE G  GE G++G  G KG PG  GP G  G  G+ G  G  G  G PG 
Sbjct: 832 PGQRGDQGALGEPGLPGEDGIQGRDGPKGEPGEQGPHGEAGEKGEMGTPGNAGPSGEPGI 891

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            GIPG EG+ G  G  G  G+ G  G+ G PGE G  G  G+ G  G  G  G
Sbjct: 892 MGIPGPEGRPGNPGQRGRLGKKGEKGQLGSPGEIGPAGDSGQLGKTGPKGARG 944



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 77/198 (38%), Gaps = 42/198 (21%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG---------- 170
           +G++G  G  G  G  G  G PG +G PG +G  GD G  G  GD GYPG          
Sbjct: 550 RGDVGPAGLSGPSGIPGPMGLPGNMGQPGMKGDKGDHGLAGDPGDQGYPGDKGAPGSPGP 609

Query: 171 --------PQ------------------------GIPGDEGKRGPKGDMGYPGRIGLDGR 198
                   PQ                        G+PG  G  GPKG +G  G  G  G 
Sbjct: 610 PGIRGKPGPQGKIGDPGSQGPLGPPGPEGFPGDIGVPGLNGPEGPKGLLGDRGSSGPQGP 669

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G+ GE G  G  G  G  G PG+ G  G  G  G  G  G++G  G  G  G +G+ G 
Sbjct: 670 KGVEGEVGPAGPIGAVGPRGKPGQKGYVGGPGPEGLKGEQGDQGNIGKTGEAGSAGLPGE 729

Query: 259 PGTPAICAYKRESCSLLP 276
            G       K E  S  P
Sbjct: 730 TGPSGSLGEKGERGSQGP 747


>gi|432857241|ref|XP_004068598.1| PREDICTED: collagen alpha-1(VII) chain-like [Oryzias latipes]
          Length = 3179

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 112/220 (50%), Gaps = 36/220 (16%)

Query: 76   QQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE 135
            Q N+ H +    L   +RIP V + G    T + CP G +G  G+KGE G  G  G KGE
Sbjct: 1226 QLNTLHADLADLLCGIARIPEV-IPGPDQCTIQ-CPQGEKGDRGEKGERGRDGAEGRKGE 1283

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGK----------RGPKGDMGYPGPQGIPGDEGKRGPKG 185
             G  G PG  GP GP+G PG  G+          +G KG+ G+PG  G PG  G+ G  G
Sbjct: 1284 PGRDGLPGREGPRGPEGRPGSPGQSIPFEPSLGTKGEKGERGFPGIDGNPGLPGRPGAPG 1343

Query: 186  DMGYPGR-------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP------GKDGIP 232
            ++G PG         GL GR G PG PG+ G PGR G DG  G  G+P      G+ GIP
Sbjct: 1344 NIGVPGEPGSPATGGGLPGRKGEPGLPGIPGTPGRPGNDGAKGSSGIPGTPGQDGRPGIP 1403

Query: 233  GTNG--TNGEKGMTGPRGN---------RGKSGINGVPGT 261
            GT G    G+KG TG RG          +G+ G  GVPGT
Sbjct: 1404 GTPGLPIKGDKGSTGERGPPGVGSGATVKGEKGSPGVPGT 1443



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 99/187 (52%), Gaps = 9/187 (4%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGE----MGVKGERGEKGAPGVVGPPGPQGIPG 155
            QG         P G +G +GQKGE G+ G     +G+KGE GE+G  G+ G PG +G  G
Sbjct: 1580 QGELGQAGPEGPRGDKGDMGQKGEKGSPGTGGSGVGIKGEPGERGPAGISGRPGSKGDAG 1639

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            + G+RG  G  G PG  G+PG EG++G KGD G PG  GL G+ G  G  GL G PGR G
Sbjct: 1640 EPGERGEDGRPGNPGKPGVPGKEGEKGDKGDEGTPGESGLPGKSGERGLRGLAGQPGRQG 1699

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKG-----MTGPRGNRGKSGINGVPGTPAICAYKRE 270
              G  G  G  G++G PG  G  GEKG         +G++G  G  G PG       K E
Sbjct: 1700 EKGDTGDPGEHGRNGSPGPAGPRGEKGDQTDIQNQLKGDKGDKGDAGDPGEHGGKGVKGE 1759

Query: 271  SCSLLPN 277
            + +  P+
Sbjct: 1760 AGAPGPS 1766



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 94/190 (49%), Gaps = 44/190 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G  G  G+KG+ G  GERGE G PG    PG  G+PG EG++G KGD G PG 
Sbjct: 1620 PGERGPAGISGRPGSKGDAGEPGERGEDGRPGN---PGKPGVPGKEGEKGDKGDEGTPGE 1676

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------------------- 212
             G+PG  G+RG +G  G PGR G  G  G PGE G +G PG                   
Sbjct: 1677 SGLPGKSGERGLRGLAGQPGRQGEKGDTGDPGEHGRNGSPGPAGPRGEKGDQTDIQNQLK 1736

Query: 213  -------------RNGMDGIPGKDGLPGK------DGIPGTNGT---NGEKGMTGPRGNR 250
                          +G  G+ G+ G PG       +G  G +GT    GE+G  G +G R
Sbjct: 1737 GDKGDKGDAGDPGEHGGKGVKGEAGAPGPSGPRGPEGPQGPSGTRGDRGERGTPGEKGER 1796

Query: 251  GKSGINGVPG 260
            G SG++G PG
Sbjct: 1797 GASGLDGRPG 1806



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 102/217 (47%), Gaps = 38/217 (17%)

Query: 76   QQNSTHNNPWVWLNAYSRIPLVAMQ----GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG 131
            ++ +T ++  V        P VA Q    G   S       G  GP GQKG+ G  GE G
Sbjct: 2113 EKGATADSGIVGSPGLRGPPGVAGQKGEPGAIGSQGSKGDQGFVGPRGQKGDRGEPGEKG 2172

Query: 132  VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG---YPGPQGIPGDEGK-----RGP 183
             +G +G  G PG  G  G  G PG+ G RGP G MG    PGP G+ G++G+     +GP
Sbjct: 2173 REGSQGTPGEPGTPGQDGKPGTPGEPGIRGPTGPMGPTGLPGPIGVKGNQGEPGVGVQGP 2232

Query: 184  KGDMGY------------------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G  G                   PG  G  G  G PG PG DG+PG++G+ G+PGK G+
Sbjct: 2233 PGAQGSTGLPGPLGPPGAVGPQGPPGLSGQVGEAGKPGVPGRDGVPGKDGLPGLPGKQGI 2292

Query: 226  PGKDGIPGTNGTNGEK--------GMTGPRGNRGKSG 254
             G  G+PG  G  G+         G  GP+G+RG  G
Sbjct: 2293 SGSVGLPGLKGEQGDSGPPGKAVAGPPGPKGDRGPPG 2329



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 85/158 (53%), Gaps = 15/158 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+ G  G+ GE G  GE G KGE+G+KG  G +G  GP G PG++G     G +G PG 
Sbjct: 2069 PGVPGRAGELGEAGRPGEKGDKGEKGDKGDSGKMGLVGPAGPPGEKGATADSGIVGSPGL 2128

Query: 172  QGIPGDEGKRG---------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            +G PG  G++G          KGD G+ G  G  G  G PGE G      R G  G PG+
Sbjct: 2129 RGPPGVAGQKGEPGAIGSQGSKGDQGFVGPRGQKGDRGEPGEKG------REGSQGTPGE 2182

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+DG PGT G  G +G TGP G  G  G  GV G
Sbjct: 2183 PGTPGQDGKPGTPGEPGIRGPTGPMGPTGLPGPIGVKG 2220



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 86/161 (53%), Gaps = 17/161 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QG +GQ G  G +G+ G  G++GEKG+PG  G     GI G+ G+RGP G  G PG  
Sbjct: 1578 GDQGELGQAGPEGPRGDKGDMGQKGEKGSPGTGGSG--VGIKGEPGERGPAGISGRPGS- 1634

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGKD 229
                       KGD G PG  G DGR G PG+PG+   +G  G  G +G PG+ GLPGK 
Sbjct: 1635 -----------KGDAGEPGERGEDGRPGNPGKPGVPGKEGEKGDKGDEGTPGESGLPGKS 1683

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G  G  G  G+ G  G +G+ G  G +G  G+P     + E
Sbjct: 1684 GERGLRGLAGQPGRQGEKGDTGDPGEHGRNGSPGPAGPRGE 1724



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 93/178 (52%), Gaps = 30/178 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
            PPGL G +G+ G+ G  G  GV G+ G  G PG  G  G  G+PG +G++          
Sbjct: 2256 PPGLSGQVGEAGKPGVPGRDGVPGKDGLPGLPGKQGISGSVGLPGLKGEQGDSGPPGKAV 2315

Query: 161  ----GPKGDMGYP--------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                GPKGD G P        G QG+PG++G +G +G++G  G  G+ G    PGE G D
Sbjct: 2316 AGPPGPKGDRGPPGQTLPGIAGEQGLPGEKGNKGDRGNLGIKGERGVAGD---PGESGED 2372

Query: 209  GIPGRNGMDGIPGKD--GLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G +G  G  G+   GLP   G+ G PG  G  G  G+ GP G  GKSG  G+PGT
Sbjct: 2373 GAKGDSGPKGDKGEKGVGLPGPSGRVGPPGLKGDPGLPGLAGPPGPLGKSGDPGLPGT 2430



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 83/170 (48%), Gaps = 27/170 (15%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            QGP G  G++G         E G+ G PG  G PG  G+PG  GK+G  G +G PG +G 
Sbjct: 2254 QGPPGLSGQVG---------EAGKPGVPGRDGVPGKDGLPGLPGKQGISGSVGLPGLKGE 2304

Query: 175  PGDE--------GKRGPKGDMGYPGRI--GLDGRDGLPGEPGLD------GIPGRNGMDG 218
             GD         G  GPKGD G PG+   G+ G  GLPGE G        GI G  G+ G
Sbjct: 2305 QGDSGPPGKAVAGPPGPKGDRGPPGQTLPGIAGEQGLPGEKGNKGDRGNLGIKGERGVAG 2364

Query: 219  IPGKDGLPGKDGIPGTNGTNGEK--GMTGPRGNRGKSGINGVPGTPAICA 266
             PG+ G  G  G  G  G  GEK  G+ GP G  G  G+ G PG P +  
Sbjct: 2365 DPGESGEDGAKGDSGPKGDKGEKGVGLPGPSGRVGPPGLKGDPGLPGLAG 2414



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 80/171 (46%), Gaps = 8/171 (4%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            QG   S     PPG    IG++G  G +G  G  G+ G  G PG  G  G  G PG++G 
Sbjct: 2032 QGAQGSVGSPGPPGRA--IGERGPQGPQGPAGEPGKPGIPGVPGRAGELGEAGRPGEKGD 2089

Query: 160  RGPKGD------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            +G KGD      MG  GP G PG++G     G +G PG  G  G  G  GEPG  G  G 
Sbjct: 2090 KGEKGDKGDSGKMGLVGPAGPPGEKGATADSGIVGSPGLRGPPGVAGQKGEPGAIGSQGS 2149

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  G  G  G  G PG  G  G +G  G  G  G+ G  G PG P I
Sbjct: 2150 KGDQGFVGPRGQKGDRGEPGEKGREGSQGTPGEPGTPGQDGKPGTPGEPGI 2200



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 86/181 (47%), Gaps = 35/181 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGDM 166
            GL GP G+KGE G  G  G+KG+RG KGA G  GP G +G       PG  G++G +GD+
Sbjct: 2668 GLLGPRGEKGESGITGMRGIKGDRGPKGACGSDGPKGDKGDSGIHGRPGLPGRKGEQGDI 2727

Query: 167  GYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGR---------------------DGLP 202
            G PG  GIPG EG  GPKGD G+   PG  G  G                       GL 
Sbjct: 2728 GPPGVTGIPGKEGIVGPKGDRGFDGVPGPKGTQGEKGERGPPGVPGPPGPRGVDGPSGLT 2787

Query: 203  GEPGLDGIPGRNGMDGIPGKDG-----LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G  G  G+ G  G+ G       G  GIPG  G  GE G  GP G +G  G  G
Sbjct: 2788 GPQGPAGAKGPEGLQGQKGERGPVGPATVGPRGIPGIPGERGESGEMGPDGIKGDKGEPG 2847

Query: 258  V 258
            +
Sbjct: 2848 M 2848



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 82/183 (44%), Gaps = 44/183 (24%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---------------------- 151
            + GP+G+KG  G  G+ G KG +GEKG  G  GP G Q                      
Sbjct: 2580 VGGPVGEKGTKGEMGDRGPKGTQGEKGVKGQEGPSGEQVNVIGNEVMVWVRGESLEKKDR 2639

Query: 152  ----------------------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
                                  G+PG  G  GP+G+ G  G  G+ G +G RGPKG  G 
Sbjct: 2640 LDSPVPVGLEDRREKQANLEYLGLPGKNGLLGPRGEKGESGITGMRGIKGDRGPKGACGS 2699

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             G  G  G  G+ G PGL G  G  G  G PG  G+PGK+GI G  G  G  G+ GP+G 
Sbjct: 2700 DGPKGDKGDSGIHGRPGLPGRKGEQGDIGPPGVTGIPGKEGIVGPKGDRGFDGVPGPKGT 2759

Query: 250  RGK 252
            +G+
Sbjct: 2760 QGE 2762



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 96/245 (39%), Gaps = 101/245 (41%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            L+G  G KG+ G  GE G KG +GE GAPG  GP GP      EG +GP G  G  G +G
Sbjct: 1735 LKGDKGDKGDAGDPGEHGGKGVKGEAGAPGPSGPRGP------EGPQGPSGTRGDRGERG 1788

Query: 174  IPGDEGKRGPKGDMGYPG------------------RIGLDGRDGLPG------------ 203
             PG++G+RG  G  G PG                  + G  GRDGLPG            
Sbjct: 1789 TPGEKGERGASGLDGRPGLDGKSGPPGPPGQRGDPGKQGDSGRDGLPGLRGEQGPRGPTG 1848

Query: 204  -----------EPGLDGIPGRNGMDGIPGKDG---------------------------- 224
                       + G  G+PG+ G DG+PG+DG                            
Sbjct: 1849 PPGNPGTPVNGQDGKPGLPGKTGEDGVPGEDGRKGDKGEPGGTGRHVIESDFQGQDGEKG 1908

Query: 225  ------------------LPGK--------DGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                              LPG          GIPG+ G  GE+G  GP+G+ G  G +G 
Sbjct: 1909 DRGPVGPVGPSGSPGAPGLPGSIGPPGQGVPGIPGSVGARGERGPAGPKGDAGDPGEDGA 1968

Query: 259  PGTPA 263
            PG P 
Sbjct: 1969 PGKPG 1973



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 46/214 (21%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV------------------------K 133
             + G   +  E  P G +G  G  GE GA G+ G                         K
Sbjct: 1940 GIPGSVGARGERGPAGPKGDAGDPGEDGAPGKPGTTVVSDLKVLLDRKDTFPSERQEPEK 1999

Query: 134  GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK----RGPKGDMGY 189
            GE+G+KG  G  GP G  G+ G +G+RG KG+ G  G  G PG  G+    RGP+G  G 
Sbjct: 2000 GEKGDKGETGPRGPSGADGVRGFQGERGAKGEQGAQGSVGSPGPPGRAIGERGPQGPQGP 2059

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             G          PG+PG+ G+PGR G  G  G+ G  G  G  G  G +G+ G+ GP G 
Sbjct: 2060 AGE---------PGKPGIPGVPGRAGELGEAGRPGEKGDKGEKGDKGDSGKMGLVGPAGP 2110

Query: 250  RGK------SGINGVPGT---PAICAYKRESCSL 274
             G+      SGI G PG    P +   K E  ++
Sbjct: 2111 PGEKGATADSGIVGSPGLRGPPGVAGQKGEPGAI 2144



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 86/187 (45%), Gaps = 32/187 (17%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------IP 154
            PPG QG  G  G +GA+GE G  G +G+ G PG  G PG  G                 P
Sbjct: 1933 PPG-QGVPGIPGSVGARGERGPAGPKGDAGDPGEDGAPGKPGTTVVSDLKVLLDRKDTFP 1991

Query: 155  GD--EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL----- 207
             +  E ++G KGD G  GP+G  G +G RG +G+ G  G  G  G  G PG PG      
Sbjct: 1992 SERQEPEKGEKGDKGETGPRGPSGADGVRGFQGERGAKGEQGAQGSVGSPGPPGRAIGER 2051

Query: 208  --------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                     G PG+ G+ G+PG+ G  G+ G PG  G  GEKG  G  G  G  G  G P
Sbjct: 2052 GPQGPQGPAGEPGKPGIPGVPGRAGELGEAGRPGEKGDKGEKGDKGDSGKMGLVGPAGPP 2111

Query: 260  GTPAICA 266
            G     A
Sbjct: 2112 GEKGATA 2118



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 93/214 (43%), Gaps = 62/214 (28%)

Query: 112  PGLQGPIGQKGEIGA-----KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            PG  G  G KGE+G      +GE G  G RGE+G  G+ G  G  G PG  G RG KGD+
Sbjct: 2506 PGTNGVKGDKGEVGVGVPGLRGERGDPGPRGEEGRAGIDGERGSTGPPGSRGARGEKGDL 2565

Query: 167  GYPGPQGIPGDE-------GKRGPKGDMGYPGRIGLDGRDGLPGEPG------------- 206
            G  G +G  GD        G++G KG+MG  G  G  G  G+ G+ G             
Sbjct: 2566 GPQGEKGDKGDTVLVGGPVGEKGTKGEMGDRGPKGTQGEKGVKGQEGPSGEQVNVIGNEV 2625

Query: 207  --------------LD--------------------GIPGRNGM---DGIPGKDGLPGKD 229
                          LD                    G+PG+NG+    G  G+ G+ G  
Sbjct: 2626 MVWVRGESLEKKDRLDSPVPVGLEDRREKQANLEYLGLPGKNGLLGPRGEKGESGITGMR 2685

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            GI G  G  G  G  GP+G++G SGI+G PG P 
Sbjct: 2686 GIKGDRGPKGACGSDGPKGDKGDSGIHGRPGLPG 2719



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 94/198 (47%), Gaps = 51/198 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------------ 153
            PG++GP G  G  G  G +GVKG +GE G  GV GPPG QG                   
Sbjct: 2198 PGIRGPTGPMGPTGLPGPIGVKGNQGEPGV-GVQGPPGAQGSTGLPGPLGPPGAVGPQGP 2256

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGK------------------RGPKGDMGYPGRI-- 193
            PG  G+ G  G  G PG  G+PG +G                   +G +GD G PG+   
Sbjct: 2257 PGLSGQVGEAGKPGVPGRDGVPGKDGLPGLPGKQGISGSVGLPGLKGEQGDSGPPGKAVA 2316

Query: 194  ---GLDGRDG-----LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKG 242
               G  G  G     LPG  G  G+PG  G  G  G  G+ G+ G+   PG +G +G KG
Sbjct: 2317 GPPGPKGDRGPPGQTLPGIAGEQGLPGEKGNKGDRGNLGIKGERGVAGDPGESGEDGAKG 2376

Query: 243  MTGPRGNRGKSGINGVPG 260
             +GP+G++G+ G+ G+PG
Sbjct: 2377 DSGPKGDKGEKGV-GLPG 2393



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 79/180 (43%), Gaps = 39/180 (21%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------DEGKRGPKG 164
             QG  G+KG+ G  G +G  G  G  G PG +GPPG QG+PG         + G  GPKG
Sbjct: 1900 FQGQDGEKGDRGPVGPVGPSGSPGAPGLPGSIGPPG-QGVPGIPGSVGARGERGPAGPKG 1958

Query: 165  DMGYPGPQGIPGDEG------------------------KRGPKGDMGYPGRIGLDGRDG 200
            D G PG  G PG  G                        ++G KGD G  G  G  G DG
Sbjct: 1959 DAGDPGEDGAPGKPGTTVVSDLKVLLDRKDTFPSERQEPEKGEKGDKGETGPRGPSGADG 2018

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            + G  G  G  G  G  G  G  G PG+       G  G +G  GP G  GK GI GVPG
Sbjct: 2019 VRGFQGERGAKGEQGAQGSVGSPGPPGR-----AIGERGPQGPQGPAGEPGKPGIPGVPG 2073



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 86/191 (45%), Gaps = 43/191 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------------- 153
            GL+G  GQ G  G KG+ G  GE G  G+PG  GP G +G                    
Sbjct: 1687 GLRGLAGQPGRQGEKGDTGDPGEHGRNGSPGPAGPRGEKGDQTDIQNQLKGDKGDKGDAG 1746

Query: 154  -PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
             PG+ G +G KG+ G PGP G  G EG +GP G  G  G  G  G  G  G  GLDG PG
Sbjct: 1747 DPGEHGGKGVKGEAGAPGPSGPRGPEGPQGPSGTRGDRGERGTPGEKGERGASGLDGRPG 1806

Query: 213  RNGMDGIPG---------KDGLPGKDGIPGTNGTNGEK--------------GMTGPRGN 249
             +G  G PG         K G  G+DG+PG  G  G +              G  G  G 
Sbjct: 1807 LDGKSGPPGPPGQRGDPGKQGDSGRDGLPGLRGEQGPRGPTGPPGNPGTPVNGQDGKPGL 1866

Query: 250  RGKSGINGVPG 260
             GK+G +GVPG
Sbjct: 1867 PGKTGEDGVPG 1877



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 80/193 (41%), Gaps = 30/193 (15%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGE-------MGVKGERGEKGAPGVVGPPGPQGI 153
            G    T E   PG  G  G KGE G  G         G  GE+G++G  G VGP G  G 
Sbjct: 1865 GLPGKTGEDGVPGEDGRKGDKGEPGGTGRHVIESDFQGQDGEKGDRGPVGPVGPSGSPGA 1924

Query: 154  PGDEGKRGPKGDM--GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---- 207
            PG  G  GP G    G PG  G  G+ G  GPKGD G PG       DG PG+PG     
Sbjct: 1925 PGLPGSIGPPGQGVPGIPGSVGARGERGPAGPKGDAGDPGE------DGAPGKPGTTVVS 1978

Query: 208  ---------DGIPG--RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                     D  P   +    G  G  G  G  G  G +G  G +G  G +G +G  G  
Sbjct: 1979 DLKVLLDRKDTFPSERQEPEKGEKGDKGETGPRGPSGADGVRGFQGERGAKGEQGAQGSV 2038

Query: 257  GVPGTPAICAYKR 269
            G PG P     +R
Sbjct: 2039 GSPGPPGRAIGER 2051



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 71/167 (42%), Gaps = 35/167 (20%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQG 152
            +  M+G           G  GP G KG+ G  G  G+   KGE+G+ G PGV G PG +G
Sbjct: 2681 ITGMRGIKGDRGPKGACGSDGPKGDKGDSGIHGRPGLPGRKGEQGDIGPPGVTGIPGKEG 2740

Query: 153  IPGDEGKRG------PKGDM------------------------GYPGPQGIPGDEGKRG 182
            I G +G RG      PKG                          G  GPQG  G +G  G
Sbjct: 2741 IVGPKGDRGFDGVPGPKGTQGEKGERGPPGVPGPPGPRGVDGPSGLTGPQGPAGAKGPEG 2800

Query: 183  PKGDMGYPGRIG--LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             +G  G  G +G    G  G+PG PG  G  G  G DGI G  G PG
Sbjct: 2801 LQGQKGERGPVGPATVGPRGIPGIPGERGESGEMGPDGIKGDKGEPG 2847



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 54/110 (49%), Gaps = 5/110 (4%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G PG  G +G KG++G     G+PG  G+RG  G  G  GR G+DG  G  G PG  G  
Sbjct: 2504 GSPGTNGVKGDKGEVGV----GVPGLRGERGDPGPRGEEGRAGIDGERGSTGPPGSRGAR 2559

Query: 212  GRNGMDGIPGKDGLPGKDG-IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G+ G  G    + G  G  G KG  G RG +G  G  GV G
Sbjct: 2560 GEKGDLGPQGEKGDKGDTVLVGGPVGEKGTKGEMGDRGPKGTQGEKGVKG 2609



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 64/139 (46%), Gaps = 35/139 (25%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV------KGERGEK------------ 139
             + G      +  PPG+ G  G++G +G KG+ G       KG +GEK            
Sbjct: 2716 GLPGRKGEQGDIGPPGVTGIPGKEGIVGPKGDRGFDGVPGPKGTQGEKGERGPPGVPGPP 2775

Query: 140  ------GAPGVVGPPGPQGIPGDEGKRGPKGDMG-----YPGPQGIPGDEGKRGPKGDMG 188
                  G  G+ GP GP G  G EG +G KG+ G       GP+GIPG  G+RG  G+MG
Sbjct: 2776 GPRGVDGPSGLTGPQGPAGAKGPEGLQGQKGERGPVGPATVGPRGIPGIPGERGESGEMG 2835

Query: 189  YPGRIGLDGRDGLPGEPGL 207
                   DG  G  GEPG+
Sbjct: 2836 P------DGIKGDKGEPGM 2848



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 64/150 (42%), Gaps = 21/150 (14%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG----------EKGAPG 143
            IP     G      E   PG+ G  G  G  GA G +GV GE G           KG PG
Sbjct: 1309 IPFEPSLGTKGEKGERGFPGIDGNPGLPGRPGAPGNIGVPGEPGSPATGGGLPGRKGEPG 1368

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP--KGDMGYPGRIG------- 194
            + G PG  G PG++G +G  G  G PG  G PG  G  G   KGD G  G  G       
Sbjct: 1369 LPGIPGTPGRPGNDGAKGSSGIPGTPGQDGRPGIPGTPGLPIKGDKGSTGERGPPGVGSG 1428

Query: 195  --LDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
              + G  G PG PG  G  G  G +G  G+
Sbjct: 1429 ATVKGEKGSPGVPGTQGPRGPAGPEGKKGE 1458



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 23/117 (19%)

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            PG  G++G +G++G  GP+G  GD+G  G KG+ G PG     G  G+    G+ G PG 
Sbjct: 1571 PGLPGRKGDQGELGQAGPEGPRGDKGDMGQKGEKGSPG----TGGSGV----GIKGEPGE 1622

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G  GI G+         PG+ G  GE G       RG+ G  G PG P +   + E
Sbjct: 1623 RGPAGISGR---------PGSKGDAGEPG------ERGEDGRPGNPGKPGVPGKEGE 1664


>gi|54295482|ref|YP_127897.1| hypothetical protein lpl2569 [Legionella pneumophila str. Lens]
 gi|53755314|emb|CAH16810.1| hypothetical protein lpl2569 [Legionella pneumophila str. Lens]
          Length = 442

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 96/174 (55%), Gaps = 21/174 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG++GE G  G+ GP G +G  G +G  GPKGD G
Sbjct: 88  EAGPQGLPGPKGDRGEAGPQGLPGPKGDKGEAGPQGLAGPKGDRGEAGPQGLPGPKGDKG 147

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 148 EAGPQGLPGPKGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDRGEAGPQGLPGPKGDKG 207

Query: 219 IPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
             G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 208 EAGPQGLPGPKGDKGEAGPQGLPGPKGDKGEAGPQGLAGPKGDRGEAGPQGLPG 261



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 92/162 (56%), Gaps = 12/162 (7%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG+RGE G  G+ GP G +G  G +G  GPKGD G
Sbjct: 73  ETGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDKGEAGPQGLAGPKGDRG 132

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G +         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 133 EAGPQGLPGPKGDKGEAGPQGLPGPKGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDRG 192

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  GLPG     G  G  G +G+ GP+G++G++G  G+PG
Sbjct: 193 EAGPQGLPGPK---GDKGEAGPQGLPGPKGDKGEAGPQGLPG 231



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 87/154 (56%), Gaps = 6/154 (3%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            P G QGP G KG+ G KG+ G  G +G  G  G  G  GPQG+PG +G RG  G  G P
Sbjct: 51  IPSGPQGPRGDKGKAGPKGDRGETGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLP 110

Query: 170 GPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GP+G  G+ G +   GPKGD G  G  GL G  G  GE G  G+PG  G  G  G  GLP
Sbjct: 111 GPKGDKGEAGPQGLAGPKGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDRGEAGPQGLP 170

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G     G  G  G +G+ GP+G+RG++G  G+PG
Sbjct: 171 GPK---GDKGEAGPQGLPGPKGDRGEAGPQGLPG 201



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/188 (40%), Positives = 91/188 (48%), Gaps = 11/188 (5%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      E  P GL GP G KGE G +G  G KG+RGE G  G+ GP G +G  G +
Sbjct: 123 GLAGPKGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDRGEAGPQGLPGPKGDKGEAGPQ 182

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  GPKGD G  GPQG+P      GPKGD G  G  GL G  G  GE G  G+PG  G  
Sbjct: 183 GLPGPKGDRGEAGPQGLP------GPKGDKGEAGPQGLPGPKGDKGEAGPQGLPGPKGDK 236

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G  G  GL G     G  G  G +G+ GP+G  G  G  G+PG         +       
Sbjct: 237 GEAGPQGLAGPK---GDRGEAGPQGLPGPKGETGAVGPQGMPGPKGEAGDDGQGVPA--G 291

Query: 278 SETSQLLI 285
            ET Q+L 
Sbjct: 292 GETGQVLA 299


>gi|395833401|ref|XP_003789725.1| PREDICTED: collagen alpha-1(IX) chain [Otolemur garnettii]
          Length = 921

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 112/229 (48%), Gaps = 62/229 (27%)

Query: 89  NAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG-------------- 134
           + Y  IP   M+G   +  E   PG QG  G++G+ G  GE+G +G              
Sbjct: 420 SGYPGIP--GMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGARGPPGAQGLRGITGIV 477

Query: 135 -ERGEKGAPGVVGPPGPQGI---PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPK 184
            ++GEKGA G+ G PGPQG+   PGD+G+R      GPKGD G  GP+GIPG     GPK
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAQGPRGIPGSP---GPK 534

Query: 185 GDMGYPGRIGLDGRDGLPGEP---------------GLDGIP------------GRNGMD 217
           GD G P   G+DGRDG+PG P               GL G+P            G  G  
Sbjct: 535 GDTGLP---GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGTT 591

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
           G PGK G  G  G PG  G  GE G  GPR   GNRG+ G  G PG P 
Sbjct: 592 GAPGKPGQLGNSGKPGQQGPAGEVGPRGPRGLPGNRGEVGPTGAPGLPG 640



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 91/188 (48%), Gaps = 45/188 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GP+
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGTTGAPGK---PGQLGNSGKPGQQGPAGEVGPRGPR 621

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGL------- 207
           G+PG+ G+ GP G  G PG+                   G+ G  G+ GEPG        
Sbjct: 622 GLPGNRGEVGPTGAPGLPGKLGPLGNPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 681

Query: 208 --------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                         +G+PG  G  G PG+ GL G +G+ G  G  G +G  GPRG +G+ 
Sbjct: 682 GEEGEAGGRGELGDEGLPGPKGSVGNPGEPGLRGPEGVRGLPGVEGPRGPPGPRGVQGEQ 741

Query: 254 GINGVPGT 261
           G  G+PG 
Sbjct: 742 GATGLPGV 749



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 51/91 (56%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPGP G+      +GPKGD+G  G +G PG    RGPKG         
Sbjct: 812 QMGIRGLPGIKGPPGPLGL------KGPKGDLGEKGERGPPG----RGPKG--------- 852

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPG+PG     GRNG DG PG  G+
Sbjct: 853 LPGATGLPGDPGPASY-GRNGRDGEPGPPGV 882



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G++G+RGP  +G  G PG  G+PGD G       
Sbjct: 812 QMGIRGLPGIKGPPGPLGLKGPKGDLGEKGERGPPGRGPKGLPGATGLPGDPG------- 864

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG PG PG+
Sbjct: 865 ---PASYGRNGRDGEPGPPGV 882



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 57/122 (46%), Gaps = 30/122 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG------------------------ERGEKGAPGVVGPP 148
           G QGP G  G  G KG+ G+ G                        + G +G PGV G P
Sbjct: 520 GAQGPRGIPGSPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIP 579

Query: 149 GPQGIPGDEG------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G +G+ G++G      K G  G+ G PG QG  G+ G RGP+G  G  G +G  G  GLP
Sbjct: 580 GAKGVAGEKGTTGAPGKPGQLGNSGKPGQQGPAGEVGPRGPRGLPGNRGEVGPTGAPGLP 639

Query: 203 GE 204
           G+
Sbjct: 640 GK 641



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 74/179 (41%), Gaps = 60/179 (33%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   ++G  G+ G++G  G VGP GP+G+PG+ G+ GP G  G 
Sbjct: 579 PGAKGVAGEKGTTGAPGKPGQLGNSGKPGQQGPAGEVGPRGPRGLPGNRGEVGPTGAPGL 638

Query: 169 PGP---------------------QGIPGDEGKRGPKG------------------DMGY 189
           PG                      +G  G  G+ GPKG                  D G 
Sbjct: 639 PGKLGPLGNPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGGRGELGDEGL 698

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
           PG     G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 PG---PKGSVGNPGEPGLRGPEGVRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 61/153 (39%), Gaps = 37/153 (24%)

Query: 86  VWLNAYSRIPLV-AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
             L     +P +   +G          PG  G +G  G+ G +G  G  G RG +G PG 
Sbjct: 567 AGLQGLPGVPGIPGAKGVAGEKGTTGAPGKPGQLGNSGKPGQQGPAGEVGPRGPRGLPGN 626

Query: 145 VGPPGPQGIPGDEGK---------------------RGPKGDMGYPGPQG---------- 173
            G  GP G PG  GK                     +G +G +G PGP+G          
Sbjct: 627 RGEVGPTGAPGLPGKLGPLGNPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGE 686

Query: 174 -----IPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                  GDEG  GPKG +G PG  GL G +G+
Sbjct: 687 AGGRGELGDEGLPGPKGSVGNPGEPGLRGPEGV 719



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 42/85 (49%), Gaps = 17/85 (20%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG +G PG  G +GPKGD+G               E G  G PGR G  G+PG  
Sbjct: 814 GIRGLPGIKGPPGPLGLKGPKGDLG---------------EKGERGPPGR-GPKGLPGAT 857

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRG 248
           GLPG  G P + G NG  G  GP G
Sbjct: 858 GLPGDPG-PASYGRNGRDGEPGPPG 881


>gi|225869058|ref|YP_002745006.1| collagen and fibronectin-binding collagen-like cell
           surface-anchored protein FneE [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702334|emb|CAX00145.1| putative collagen and fibronectin-binding collagen-like cell
           surface-anchored protein FneE [Streptococcus equi subsp.
           zooepidemicus]
          Length = 731

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/157 (45%), Positives = 91/157 (57%), Gaps = 12/157 (7%)

Query: 107 KEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           KE    GL GP G+KGE    G+ G KGER      G  GP GPQG+PG +G  G  G+ 
Sbjct: 268 KELIKHGLNGPRGEKGEP---GKTGPKGER------GPAGPQGPQGLPGKQGPAGKDGEK 318

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKD 223
           G  G  G PG +G+ GPKG+ G PG+ G+ G  G P   G+ G DG PG  G  G PG+ 
Sbjct: 319 GKDGEPGKPGRDGQPGPKGEKGDPGQQGIPGPKGDPGKDGQDGKDGQPGPKGEKGDPGQQ 378

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+PG  G PG +G +G+ G  GP+G +G  G  G+PG
Sbjct: 379 GIPGPKGDPGKDGQDGKDGQPGPKGEKGDPGQQGIPG 415



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 91/164 (55%), Gaps = 24/164 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE------RGEKGAPGVVGPPGPQGIPGDEGKR----- 160
           PG QGP G+ GE G  GE G  G       +GEKG PG  G PGP+G PG +G+      
Sbjct: 306 PGKQGPAGKDGEKGKDGEPGKPGRDGQPGPKGEKGDPGQQGIPGPKGDPGKDGQDGKDGQ 365

Query: 161 -GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM--- 216
            GPKG+ G PG QGIP      GPKGD   PG+ G DG+DG PG  G  G PG+ G+   
Sbjct: 366 PGPKGEKGDPGQQGIP------GPKGD---PGKDGQDGKDGQPGPKGEKGDPGQQGIPGP 416

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG DG  G+ G  G  G  GE+G  GP+G RG+ G  G  G
Sbjct: 417 KGDPGHDGKDGEKGERGEQGPQGERGEQGPQGERGEQGPQGERG 460



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/141 (45%), Positives = 78/141 (55%), Gaps = 12/141 (8%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G+ G RGEKG PG  GP G      + G  GP+G  G PG QG  G +G++G  G+ G P
Sbjct: 274 GLNGPRGEKGEPGKTGPKG------ERGPAGPQGPQGLPGKQGPAGKDGEKGKDGEPGKP 327

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---GEKGMTGPR 247
           GR G  G  G  G+PG  GIP   G  G PGKDG  GKDG PG  G     G++G+ GP+
Sbjct: 328 GRDGQPGPKGEKGDPGQQGIP---GPKGDPGKDGQDGKDGQPGPKGEKGDPGQQGIPGPK 384

Query: 248 GNRGKSGINGVPGTPAICAYK 268
           G+ GK G +G  G P     K
Sbjct: 385 GDPGKDGQDGKDGQPGPKGEK 405



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 81/148 (54%), Gaps = 3/148 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ GP G  G+ G  G+ G  G +GEKG PG  G PGP+G PG +GK G KG+ G  GPQ
Sbjct: 379 GIPGPKGDPGKDGQDGKDGQPGPKGEKGDPGQQGIPGPKGDPGHDGKDGEKGERGEQGPQ 438

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
              G+ G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G  G  
Sbjct: 439 ---GERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGER 495

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  GE+G  GP+G RG+ G  G  G
Sbjct: 496 GEQGPQGERGEQGPQGERGEQGPQGERG 523



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 83/160 (51%), Gaps = 12/160 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGPK 163
           G+ GP G  G+ G  G+ G  G +GEKG PG  G PGP+G PG +G+         +G K
Sbjct: 346 GIPGPKGDPGKDGQDGKDGQPGPKGEKGDPGQQGIPGPKGDPGKDGQDGKDGQPGPKGEK 405

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GD    G PGP+G PG +GK G KG+ G  G  G  G  G  GE G  G  G  G  G  
Sbjct: 406 GDPGQQGIPGPKGDPGHDGKDGEKGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQ 465

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G  G  G  G  G  GE+G  GP+G RG+ G  G  G
Sbjct: 466 GERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERG 505



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 83/151 (54%), Gaps = 6/151 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G KG+ G  G+ G KGERGE+G  G  G  GPQG   + G++GP+G+ G  GP
Sbjct: 408 PGQQGIPGPKGDPGHDGKDGEKGERGEQGPQGERGEQGPQG---ERGEQGPQGERGEQGP 464

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QG   + G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G  G 
Sbjct: 465 QG---ERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGE 521

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            G  G  GE+G  GP+G RG+ G  G   TP
Sbjct: 522 RGEQGPQGERGEQGPQGERGEQGPRGENPTP 552



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 81/151 (53%), Gaps = 3/151 (1%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYP 169
           G  GP G+KG+ G +G  G KG+ G+ G  G  G PGP+G    PG +G  GPKGD G+ 
Sbjct: 364 GQPGPKGEKGDPGQQGIPGPKGDPGKDGQDGKDGQPGPKGEKGDPGQQGIPGPKGDPGHD 423

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G  G+ G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G  
Sbjct: 424 GKDGEKGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQ 483

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  GE+G  GP+G RG+ G  G  G
Sbjct: 484 GERGEQGPQGERGEQGPQGERGEQGPQGERG 514



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 84/159 (52%), Gaps = 15/159 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIP---GDEGKRGPKG 164
           P G +G  GQ+G  G KG+ G  G+ G+ G PG  G    PG QGIP   GD GK G  G
Sbjct: 335 PKGEKGDPGQQGIPGPKGDPGKDGQDGKDGQPGPKGEKGDPGQQGIPGPKGDPGKDGQDG 394

Query: 165 DMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             G PGP+G  GD G++   GPKGD G+      DG+DG  GE G  G  G  G  G  G
Sbjct: 395 KDGQPGPKGEKGDPGQQGIPGPKGDPGH------DGKDGEKGERGEQGPQGERGEQGPQG 448

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G  G  G  G  G  GE+G  GP+G RG+ G  G  G
Sbjct: 449 ERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERG 487



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 79/150 (52%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  G  GQ G+ G  G  G KG+ G++G PG  G PG  G  G++G+RG +G  G  G
Sbjct: 383 PKGDPGKDGQDGKDGQPGPKGEKGDPGQQGIPGPKGDPGHDGKDGEKGERGEQGPQGERG 442

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            QG  G+ G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G  G
Sbjct: 443 EQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQG 502

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GE+G  GP+G RG+ G  G  G
Sbjct: 503 ERGEQGPQGERGEQGPQGERGEQGPQGERG 532



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/138 (43%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  G  G+ GE G +GE G +GERGE+G  G  G  GPQ   G+ G++GP+G+ G  G
Sbjct: 416 PKGDPGHDGKDGEKGERGEQGPQGERGEQGPQGERGEQGPQ---GERGEQGPQGERGEQG 472

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           PQ   G+ G++GP+G+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G  G
Sbjct: 473 PQ---GERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQG 529

Query: 231 IPGTNGTNGEKGMTGPRG 248
             G  G  GE+G  GPRG
Sbjct: 530 ERGEQGPQGERGEQGPRG 547



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 38/59 (64%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           G QGP G++GE G +GE G +G +GE+G  G  G  G QG  G+ G++GP+G+   P P
Sbjct: 496 GEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPRGENPTPTP 554


>gi|148358621|ref|YP_001249828.1| hypothetical protein LPC_0495 [Legionella pneumophila str. Corby]
 gi|148280394|gb|ABQ54482.1| hypothetical protein LPC_0495 [Legionella pneumophila str. Corby]
          Length = 424

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/172 (45%), Positives = 96/172 (55%), Gaps = 21/172 (12%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            P GL GP G +GE G +G  G KG+RGE G  G+ GP G +G  G +G  GPKGD G  
Sbjct: 54  GPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEA 113

Query: 170 GPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GPQG+PG +G R         GPKGD+G  G  GL G  G  GE G  G+PG  G  G  
Sbjct: 114 GPQGLPGPKGDRGEAGPQGLPGPKGDIGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEA 173

Query: 221 GKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
           G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 174 GPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG 225



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 95/174 (54%), Gaps = 21/174 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG+RGE G  G+ GP G QG  G +G  GPKGD G
Sbjct: 67  EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRG 126

Query: 168 YPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G           GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 127 EAGPQGLPGPKGDIGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRG 186

Query: 219 IPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
             G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 187 EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG 240



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/176 (46%), Positives = 92/176 (52%), Gaps = 25/176 (14%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRG 161
           E  P GL GP G +GE G +G  G KG+RGE G  G+ GP       GPQG+PG +G RG
Sbjct: 97  EAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDIGEAGPQGLPGPKGDRG 156

Query: 162 ---------PKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPG 203
                    PKGD G  GPQG+PG +G R         GPKGD G  G  GL G  G  G
Sbjct: 157 EAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRG 216

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           E G  G+PG  G  G  G  GLPG  G  G  G  G +GM GP+G  G  G  GVP
Sbjct: 217 EAGPQGLPGPKGDRGEAGPQGLPGPKGDKGETGAVGPQGMPGPKGEAGDDG-QGVP 271



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 76/144 (52%), Gaps = 30/144 (20%)

Query: 147 PPGPQGIPGDEGKRG---------PKGDMGYPGPQGIPGDEGKR---------GPKGDMG 188
           P GPQG+PG +G RG         PKGD G  GPQG+PG +G R         GPKGD G
Sbjct: 52  PSGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQG 111

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNG 239
             G  GL G  G  GE G  G+PG  G  G  G  GLP         G  G+PG  G  G
Sbjct: 112 EAGPQGLPGPKGDRGEAGPQGLPGPKGDIGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQG 171

Query: 240 E---KGMTGPRGNRGKSGINGVPG 260
           E   +G+ GP+G+RG++G  G+PG
Sbjct: 172 EAGPQGLPGPKGDRGEAGPQGLPG 195



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 9/87 (10%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPG---DEG 158
           E  P GL GP G +GE G +G  G KG+RGE G  G+ GP       GPQG+PG   D+G
Sbjct: 187 EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDKG 246

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           + G  G  G PGP+G  GD+G+  P G
Sbjct: 247 ETGAVGPQGMPGPKGEAGDDGQGVPAG 273


>gi|410033175|ref|XP_003949500.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(XXIV) chain [Pan
            troglodytes]
          Length = 1713

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/158 (47%), Positives = 93/158 (58%), Gaps = 6/158 (3%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGD 165
            PGL+G  GQ+G   E G +GE G+KGERG +G  G  G PGP    GIPG +G  GPKG 
Sbjct: 1232 PGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGI 1291

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GY G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+ G PG  G 
Sbjct: 1292 QGYHGTDGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGP 1351

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ G+PG  G  G++G  G +G++G  G  G+ G P 
Sbjct: 1352 KGEKGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPG 1389



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 98/163 (60%), Gaps = 15/163 (9%)

Query: 113  GLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGP---QGIPGDEGKRGPK 163
            G+QG  G+KG+ G +G  G+       GERG +G PG+ G PG    +G+PG+ G RG +
Sbjct: 939  GIQGAKGEKGDQGERGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQ 998

Query: 164  GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GD+G PG  G+   PG EG+ G +G+ G  G +G  G  G  GEPGL G PG  G +G+ 
Sbjct: 999  GDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQ 1058

Query: 221  GKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GKDGL   PG  G+PG +G  GE G+ G  G  G+SG  G+PG
Sbjct: 1059 GKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPG 1101



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 93/175 (53%), Gaps = 16/175 (9%)

Query: 96   LVAMQGFCNSTKEYC---PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L  +QG      E     PPG +G  G +GE GAKG++G  G  G  G PG+ G PG   
Sbjct: 994  LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPG--- 1050

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
             PG+EG +G  G  G PG +G+PG++G+   KG+MG PG IG  GR G  G PGL     
Sbjct: 1051 APGEEGLQGKDGLKGVPGGRGLPGEDGE---KGEMGLPGIIGPLGRSGQTGLPGLKNC-- 1105

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
                 GIPG++G PGK G  G  G  GE G  GP G  GKSG  G  GT     +
Sbjct: 1106 -----GIPGQEGRPGKKGDKGQIGPTGEVGSRGPPGRIGKSGPKGARGTRGAVGH 1155



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 90/170 (52%), Gaps = 21/170 (12%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +GV G RG   ++G PG  G  G QG+ G+ G  G KG  G PGP
Sbjct: 1214 QGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGP 1273

Query: 172  QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G   IPG +G  GPKG  GY         PG+IG  G+ GL   PG+ G PGR G+ G 
Sbjct: 1274 SGKPGIPGLQGLLGPKGIQGYHGTDGISGNPGKIGPPGKQGL---PGIRGGPGRTGLAGA 1330

Query: 220  PGKDGLPGKDGIPGT---NGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            PG  G+ G  G+PG+    G  GEKG+ G  G +GK G  G  G    C 
Sbjct: 1331 PGPPGVKGSSGLPGSPGIQGPKGEKGLPGQPGIQGKRGHRGAQGDQGPCG 1380



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/192 (40%), Positives = 90/192 (46%), Gaps = 33/192 (17%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            V  QG      E  P GL G +G  G IG KGE G  G  G +G  GV+           
Sbjct: 842  VGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGP 901

Query: 146  -------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                         GPPG QG  G  G RGP G +G    QGI   +G +G KGD G  G 
Sbjct: 902  IGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGE---QGI---QGAKGEKGDQGERGP 955

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGN 249
             GL G+ G PGE G  G PG  G+ G  G  GLPG+ G+ G     G  GE GM GP G 
Sbjct: 956  HGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGT 1015

Query: 250  RGKSGINGVPGT 261
             G+SG+ G PG 
Sbjct: 1016 EGESGLQGEPGA 1027



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 93/195 (47%), Gaps = 28/195 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKG----------------------EIGAKGEMGVKGE 135
             + G+     +  P GL GP G+KG                      E G +GE G +G 
Sbjct: 1166 GIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGY 1225

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
            +G  G PG+ G  G QG PG+       GD G  G +G  G EG +G KG  G  G+ G+
Sbjct: 1226 KGHVGVPGLRGATGQQGPPGE------PGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGI 1279

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G  GL G  G+ G  G +G+ G PGK G PGK G+PG  G  G  G+ G  G  G  G 
Sbjct: 1280 PGLQGLLGPKGIQGYHGTDGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGS 1339

Query: 256  NGVPGTPAICAYKRE 270
            +G+PG+P I   K E
Sbjct: 1340 SGLPGSPGIQGPKGE 1354



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 94/206 (45%), Gaps = 51/206 (24%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------- 143
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG             
Sbjct: 1229 VGVPGLRGATGQQGPPGEPG---DQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGL 1285

Query: 144  --------------------VVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGD 177
                                 +GPPG QG+PG  G  G  G  G PGP       G+PG 
Sbjct: 1286 LGPKGIQGYHGTDGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGS 1345

Query: 178  EGKRGPKGDMGYPGRIGLDGR---------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             G +GPKG+ G PG+ G+ G+          G  G+PGL G PG  G+ G+ G  G PG 
Sbjct: 1346 PGIQGPKGEKGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGP 1405

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G  G  G  GP G+RG +G
Sbjct: 1406 KGPEGDAGIVGISGPKGPVGHRGNTG 1431



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 85/152 (55%), Gaps = 12/152 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G      V GE+G++G  G++GPPG QG   D+G +G  G  G PG 
Sbjct: 527 PGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQG---DKGLKGHPGLPGLPGE 583

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---PGRNGMDGIPGKDGLPGK 228
           QGIPG  G     G  GYPGR GL G +G PG  G  G    PG  G  G  G+ G+P  
Sbjct: 584 QGIPGFAGN---IGSPGYPGRQGLAGPEGNPGPKGAQGFYCSPGEAGQLGXEGERGIP-- 638

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GI G  G  G +G  G  G+RG +G++G PG
Sbjct: 639 -GIRGKKGFKGRQGFPGDFGDRGPAGLDGSPG 669



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 96/206 (46%), Gaps = 45/206 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQ--GIPGDEGKRG 161
            GLQG  G KG  G +G  G  GE+GE G PG++GP         PG +  GIPG EG+ G
Sbjct: 1056 GLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGLKNCGIPGQEGRPG 1115

Query: 162  PKGDMGYPGP------QGIPGDEGKRGPKGD------MGYPGRIGLDGRDGLPGEPGLDG 209
             KGD G  GP      +G PG  GK GPKG       +G+ G +G DG  G+PG  G  G
Sbjct: 1116 KKGDKGQIGPTGEVGSRGPPGRIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQG 1175

Query: 210  IPGRNGMDGIPGKDGLPGKD----------------------GIPGTNGTNGEKGMTGPR 247
             PG +G+ G  G+ G PG+D                      G PG  G  G  G+ G R
Sbjct: 1176 QPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLR 1235

Query: 248  GNRGKSGINGVPGTPAICAYKRESCS 273
            G  G+ G  G PG       K E  S
Sbjct: 1236 GATGQQGPPGEPGDQGEQGLKGERGS 1261



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 88/188 (46%), Gaps = 36/188 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGDM 166
           GL GP G +G+ G KG  G+ G  GE+G PG  G       PG QG+ G EG  GPKG  
Sbjct: 558 GLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQ 617

Query: 167 GY------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------- 207
           G+             G +GIPG  GK+G KG  G+PG  G  G  GL G PGL       
Sbjct: 618 GFYCSPGEAGQLGXEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPP 677

Query: 208 --------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGIN 256
                    G  G  G  GIPG  GL G  G+PG  G  GE+G  G  G     G  G  
Sbjct: 678 GFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAV 737

Query: 257 GVPGTPAI 264
           G+PG P +
Sbjct: 738 GLPGPPGM 745



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/235 (34%), Positives = 101/235 (42%), Gaps = 57/235 (24%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD 156
            +G    T E    G  G IG+ G  GA+G  G  G     G  G PG+ G  G QG PG 
Sbjct: 1120 KGQIGPTGEVGSRGPPGRIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGP 1179

Query: 157  EGKRGPKGDMGYPG-------------------PQGIPGDEGKRGPKGDMGYPGRIGLDG 197
             G  GPKG+ GYPG                    QG  G+ G  G KG +G PG  G  G
Sbjct: 1180 SGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRGATG 1239

Query: 198  RDGLPGEP------------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN- 238
            + G PGEP                  G  G PG +G  GIPG  GL G  GI G +GT+ 
Sbjct: 1240 QQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGTDG 1299

Query: 239  -----------GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
                       G++G+ G RG  G++G+ G PG P +     +  S LP S   Q
Sbjct: 1300 ISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGV-----KGSSGLPGSPGIQ 1349



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 84/178 (47%), Gaps = 22/178 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----- 167
            G+ G  G+ G+ G KG++G  GE G +G PG +G  GP+G  G  G  G  G MG     
Sbjct: 1106 GIPGQEGRPGKKGDKGQIGPTGEVGSRGPPGRIGKSGPKGARGTRGAVGHLGLMGPDGEP 1165

Query: 168  ----YPGPQGIPGDEGKRGPKGDMGYPGR-------------IGLDGRDGLPGEPGLDGI 210
                Y G QG PG  G  GPKG+ GYPG               G  G  G  GEPG +G 
Sbjct: 1166 GIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGY 1225

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G+ G+ G  G  G  G PG  G  G KG  G  GN+GK G  G  G P I   +
Sbjct: 1226 KGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQ 1283



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 84/175 (48%), Gaps = 27/175 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYP 169
           G +G  GQKG  G  G  G+KGE G++G  G +G  GP G+PG+    G  G KG+ G P
Sbjct: 819 GPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSP 878

Query: 170 GPQG------------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GP G                        +PG  G RGP G  G  G+ G  G DGL GE 
Sbjct: 879 GPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQ 938

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G  G  G  G  G  GL GK G PG  G  G+ G+ G  G+ G  G+ G PG
Sbjct: 939 GIQGAKGEKGDQGERGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPG 993



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG--- 194
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q +PG++G +G  G MG PG  G   
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKG 570

Query: 195 LDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTN------GEKGMTG 245
           L G  GLPG PG  GIPG     G  G PG+ GL G +G PG  G        GE G  G
Sbjct: 571 LKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFYCSPGEAGQLG 630

Query: 246 PRGNRGKSGING 257
             G RG  GI G
Sbjct: 631 XEGERGIPGIRG 642



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 91/184 (49%), Gaps = 39/184 (21%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IG  GE+G +G+ G+K   G  G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 802 LKGTQGEEGPIGPFGELGPRGKPGQK---GYAGEPGPEGLKGEVGDQGNIGKIGETGPVG 858

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
           +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 859 LPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG 918

Query: 213 RN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGING 257
                G  G  G DGL G+ GI G  G  G++G  GP            RG +GK G+ G
Sbjct: 919 SQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGERGPHGLIGKTGNPGERGFQGKPGLQG 978

Query: 258 VPGT 261
           +PG+
Sbjct: 979 LPGS 982



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 96/233 (41%), Gaps = 66/233 (28%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             QGF      YC PG  G +G +GE G  G  G KG +G +G PG  G  GP G+ G  
Sbjct: 615 GAQGF------YCSPGEAGQLGXEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSP 668

Query: 158 G------------------KRGPKGDMGYPGPQG---------IPGDEGKRGPKGDMGYP 190
           G                    GP G  G PGP G         I GD+G++G  G++G P
Sbjct: 669 GLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEP 728

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMD---------------------GIPGKDGLPGKD 229
           G  G  G  GLPG PG+ G PG +G                       GIPG++G  G  
Sbjct: 729 GYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPK 788

Query: 230 GIPGT---------NGTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRE 270
           G+ G           GT GE+G  GP G    RGK G  G  G P     K E
Sbjct: 789 GLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGEPGPEGLKGE 841



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 74/140 (52%), Gaps = 3/140 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G  G+ G  GA G  GVKG  G  G+PG+ GP G +G+PG  G +G +G  G  G 
Sbjct: 1316 PGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEKGLPGQPGIQGKRGHRGAQGD 1375

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG  GD G +G  G+ G     GL G  G PG  G +G  G  G+ G  G  G  G  G 
Sbjct: 1376 QGPCGDPGLKGQPGEYGV---QGLTGFQGFPGPKGPEGDAGIVGISGPKGPVGHRGNTGP 1432

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G  G  G TGPRG +G
Sbjct: 1433 LGREGIIGPTGRTGPRGEKG 1452



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 88/182 (48%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
           GL G  G KGE G  GE+G  G  G+KGA G+ GPPG +G PG  G+ G           
Sbjct: 708 GLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGPSGPP 767

Query: 162 ----PKGDMGYPG---PQG---------------IPGDEGKRGPKGDMGYPGRIGLDGRD 199
                 GD+G PG   P+G               + G +G+ GP G  G  G  G  G+ 
Sbjct: 768 GPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQK 827

Query: 200 GLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  GEPG +G+ G  G  G  GK       GLPG+ G+ G+ G  GE+G  GP G +G+ 
Sbjct: 828 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEK 887

Query: 254 GI 255
           G+
Sbjct: 888 GV 889



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+QGP G+KG  G  G  G +G RG +G  G  G PG +G PG+ G +G  G  G+PGP
Sbjct: 1346 PGIQGPKGEKGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGP 1405

Query: 172  QGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            +G  GD    G  GPKG +G+ G  G  GR+G+ G  G  G  G  G  G
Sbjct: 1406 KGPEGDAGIVGISGPKGPVGHRGNTGPLGREGIIGPTGRTGPRGEKGFRG 1455



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 84/180 (46%), Gaps = 33/180 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G KG +G +G  G   +KG +GE+G  G  G  GP+G PG       KG  G 
Sbjct: 779 PGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQ------KGYAGE 832

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP+G+      +G  GD G  G+IG  G  GLPGE G+ G  G  G  G PG  G  G+
Sbjct: 833 PGPEGL------KGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGE 886

Query: 229 DGI------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+                  PG  G  G  G  GP+G RG  G +G+ G   I   K E
Sbjct: 887 KGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGE 946



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 80/178 (44%), Gaps = 27/178 (15%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + GF  +      PG QG  G +G  G KG  G     GE G    +G  G +GIPG  
Sbjct: 585 GIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFYCSPGEAGQ---LGXEGERGIPGIR 641

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------------------IGLDGRD 199
           GK+G KG       QG PGD G RGP G  G PG                   +G  G  
Sbjct: 642 GKKGFKGR------QGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPA 695

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G+PG  GL G  G  G+ G  G+ G  G+ G PG  G  G  G+ GP G RGK G +G
Sbjct: 696 GIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSG 753



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            G QGP G  G  G  GE GV+G  G +G PG  GP G  GI G  G +GP G  G  GP 
Sbjct: 1374 GDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPVGHRGNTGPL 1433

Query: 172  --QGIPGDEGKRGPKGDMGYPGR 192
              +GI G  G+ GP+G+ G+ G 
Sbjct: 1434 GREGIIGPTGRTGPRGEKGFRGE 1456


>gi|426250104|ref|XP_004018778.1| PREDICTED: collagen alpha-1(XXI) chain isoform 2 [Ovis aries]
          Length = 954

 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/161 (45%), Positives = 88/161 (54%), Gaps = 9/161 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGD 165
           PGL G  G+ G  G  G MG  G +GE G PG        G PG  G PG++G  G KGD
Sbjct: 559 PGLPGRAGEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGSRGEPGIPGFPGNQGLMGQKGD 618

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G PGP G  G  G  G  G  G PG+ G  G  G  GEPGL G+PG +G+ G PG  G 
Sbjct: 619 IGPPGPLGKKGAPGIPGLMGTDGSPGQPGAPGSKGNKGEPGLQGLPGASGLKGEPGAVGP 678

Query: 226 PGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG+    G+PG  G  G+KG  G RG +G+ G NG PG P 
Sbjct: 679 PGEPGYLGLPGIQGKKGDKGNQGERGIQGQKGENGRPGIPG 719



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 81/148 (54%), Gaps = 3/148 (2%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG +GQKG+IG  G +G KG  G  G  G  G PG  G PG +G +G  G  G PG 
Sbjct: 607 PGNQGLMGQKGDIGPPGPLGKKGAPGIPGLMGTDGSPGQPGAPGSKGNKGEPGLQGLPGA 666

Query: 172 QGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G+ G+ G  GP G+ GY   PG  G  G  G  GE G+ G  G NG  GIPG  G+PG 
Sbjct: 667 SGLKGEPGAVGPPGEPGYLGLPGIQGKKGDKGNQGERGIQGQKGENGRPGIPGSQGIPGH 726

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G  G  GE G  G  G +G+SG++
Sbjct: 727 HGAKGERGEKGEPGARGATGAKGESGVD 754



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 103/227 (45%), Gaps = 43/227 (18%)

Query: 73  EKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIG------------Q 120
           E+  + +    P    N  S +   A    C   K    PGLQGP G            Q
Sbjct: 413 EQNNRETACEIPGFCFNGPSDVGSTAAPCICPPGK----PGLQGPKGDPGQPGNPGYPGQ 468

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            G+ G  G  G+ G  G  G+PG+ G    PG +G PG +G++G +G  G+PG  GIPG 
Sbjct: 469 PGQDGKPGYQGIAGSPGVPGSPGIQGAQGLPGYKGEPGRDGEKGDRGLPGFPGLHGIPGS 528

Query: 178 EGKRGPKGDMGYPGRI---------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           +G+ GPKG+ G PG                 GL GR G PG  G DG+ G  G  G  G 
Sbjct: 529 KGEMGPKGEKGSPGFYGKKGAKGEKGNAGFPGLPGRAGEPGRHGKDGLMGSPGYKGEAGP 588

Query: 223 DGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG+D         G PG  G  G+KG  GP G  GK G  G+PG
Sbjct: 589 PGAPGQDGSRGEPGIPGFPGNQGLMGQKGDIGPPGPLGKKGAPGIPG 635



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 107/220 (48%), Gaps = 42/220 (19%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   S      PG+QG    +G  G KGE G  GE+G++G PG    PG  GIPG +G+
Sbjct: 478 QGIAGSPGVPGSPGIQG---AQGLPGYKGEPGRDGEKGDRGLPGF---PGLHGIPGSKGE 531

Query: 160 RGPKGD------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRI------GL 195
            GPKG+                   G+PG  G  G+ G+ G  G MG PG        G 
Sbjct: 532 MGPKGEKGSPGFYGKKGAKGEKGNAGFPGLPGRAGEPGRHGKDGLMGSPGYKGEAGPPGA 591

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIP---------GKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G+DG  GEPG+ G PG  G+ G           GK G PG  G+ GT+G+ G+ G  G 
Sbjct: 592 PGQDGSRGEPGIPGFPGNQGLMGQKGDIGPPGPLGKKGAPGIPGLMGTDGSPGQPGAPGS 651

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           +GN+G+ G+ G+PG   +   K E  ++ P  E   L +P
Sbjct: 652 KGNKGEPGLQGLPGASGL---KGEPGAVGPPGEPGYLGLP 688



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 78/146 (53%), Gaps = 9/146 (6%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGD 156
           QG      +  PPG   P+G+KG  G  G MG  G  G+ GAPG  G    PG QG+PG 
Sbjct: 610 QGLMGQKGDIGPPG---PLGKKGAPGIPGLMGTDGSPGQPGAPGSKGNKGEPGLQGLPGA 666

Query: 157 EGKRGPKGDMGYPGPQG---IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G +G  G +G PG  G   +PG +GK+G KG+ G  G  G  G +G PG PG  GIPG 
Sbjct: 667 SGLKGEPGAVGPPGEPGYLGLPGIQGKKGDKGNQGERGIQGQKGENGRPGIPGSQGIPGH 726

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNG 239
           +G  G  G+ G PG  G  G  G +G
Sbjct: 727 HGAKGERGEKGEPGARGATGAKGESG 752



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 75/161 (46%), Gaps = 27/161 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G +G KG PG  G PG  G PG +GK G +G  G PG  G PG +G +G  G  G P
Sbjct: 446 GKPGLQGPKGDPGQPGNPGYPGQPGQDGKPGYQGIAGSPGVPGSPGIQGAQGLPGYKGEP 505

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRN---------------------------GMDGIPGKD 223
           GR G  G  GLPG PGL GIPG                             G  G+PG+ 
Sbjct: 506 GRDGEKGDRGLPGFPGLHGIPGSKGEMGPKGEKGSPGFYGKKGAKGEKGNAGFPGLPGRA 565

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG+ G  G  G+ G KG  GP G  G+ G  G PG P  
Sbjct: 566 GEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGSRGEPGIPGF 606



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---IPGKDGLPGKDGI 231
           PG  G +GPKGD G PG        G PG+PG DG PG  G+ G   +PG  G+ G  G+
Sbjct: 445 PGKPGLQGPKGDPGQPGN------PGYPGQPGQDGKPGYQGIAGSPGVPGSPGIQGAQGL 498

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG  G  G  G  G RG  G  G++G+PG+      K E  S
Sbjct: 499 PGYKGEPGRDGEKGDRGLPGFPGLHGIPGSKGEMGPKGEKGS 540


>gi|426250102|ref|XP_004018777.1| PREDICTED: collagen alpha-1(XXI) chain isoform 1 [Ovis aries]
          Length = 957

 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/161 (45%), Positives = 88/161 (54%), Gaps = 9/161 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGD 165
           PGL G  G+ G  G  G MG  G +GE G PG        G PG  G PG++G  G KGD
Sbjct: 562 PGLPGRAGEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGSRGEPGIPGFPGNQGLMGQKGD 621

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G PGP G  G  G  G  G  G PG+ G  G  G  GEPGL G+PG +G+ G PG  G 
Sbjct: 622 IGPPGPLGKKGAPGIPGLMGTDGSPGQPGAPGSKGNKGEPGLQGLPGASGLKGEPGAVGP 681

Query: 226 PGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG+    G+PG  G  G+KG  G RG +G+ G NG PG P 
Sbjct: 682 PGEPGYLGLPGIQGKKGDKGNQGERGIQGQKGENGRPGIPG 722



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 81/148 (54%), Gaps = 3/148 (2%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG +GQKG+IG  G +G KG  G  G  G  G PG  G PG +G +G  G  G PG 
Sbjct: 610 PGNQGLMGQKGDIGPPGPLGKKGAPGIPGLMGTDGSPGQPGAPGSKGNKGEPGLQGLPGA 669

Query: 172 QGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G+ G+ G  GP G+ GY   PG  G  G  G  GE G+ G  G NG  GIPG  G+PG 
Sbjct: 670 SGLKGEPGAVGPPGEPGYLGLPGIQGKKGDKGNQGERGIQGQKGENGRPGIPGSQGIPGH 729

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G  G  GE G  G  G +G+SG++
Sbjct: 730 HGAKGERGEKGEPGARGATGAKGESGVD 757



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 107/220 (48%), Gaps = 42/220 (19%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   S      PG+QG    +G  G KGE G  GE+G++G PG    PG  GIPG +G+
Sbjct: 481 QGIAGSPGVPGSPGIQG---AQGLPGYKGEPGRDGEKGDRGLPGF---PGLHGIPGSKGE 534

Query: 160 RGPKGD------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRI------GL 195
            GPKG+                   G+PG  G  G+ G+ G  G MG PG        G 
Sbjct: 535 MGPKGEKGSPGFYGKKGAKGEKGNAGFPGLPGRAGEPGRHGKDGLMGSPGYKGEAGPPGA 594

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIP---------GKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G+DG  GEPG+ G PG  G+ G           GK G PG  G+ GT+G+ G+ G  G 
Sbjct: 595 PGQDGSRGEPGIPGFPGNQGLMGQKGDIGPPGPLGKKGAPGIPGLMGTDGSPGQPGAPGS 654

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           +GN+G+ G+ G+PG   +   K E  ++ P  E   L +P
Sbjct: 655 KGNKGEPGLQGLPGASGL---KGEPGAVGPPGEPGYLGLP 691



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 94/193 (48%), Gaps = 42/193 (21%)

Query: 110 CPPG---LQGPIG------------QKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ 151
           CPPG   LQGP G            Q G+ G  G  G+ G  G  G+PG+ G    PG +
Sbjct: 446 CPPGKPGLQGPKGDPGQPGNPGYPGQPGQDGKPGYQGIAGSPGVPGSPGIQGAQGLPGYK 505

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---------------GLD 196
           G PG +G++G +G  G+PG  GIPG +G+ GPKG+ G PG                 GL 
Sbjct: 506 GEPGRDGEKGDRGLPGFPGLHGIPGSKGEMGPKGEKGSPGFYGKKGAKGEKGNAGFPGLP 565

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---------GIPGTNGTNGEKGMTGPR 247
           GR G PG  G DG+ G  G  G  G  G PG+D         G PG  G  G+KG  GP 
Sbjct: 566 GRAGEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGSRGEPGIPGFPGNQGLMGQKGDIGPP 625

Query: 248 GNRGKSGINGVPG 260
           G  GK G  G+PG
Sbjct: 626 GPLGKKGAPGIPG 638



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 78/146 (53%), Gaps = 9/146 (6%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGD 156
           QG      +  PPG   P+G+KG  G  G MG  G  G+ GAPG  G    PG QG+PG 
Sbjct: 613 QGLMGQKGDIGPPG---PLGKKGAPGIPGLMGTDGSPGQPGAPGSKGNKGEPGLQGLPGA 669

Query: 157 EGKRGPKGDMGYPGPQG---IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G +G  G +G PG  G   +PG +GK+G KG+ G  G  G  G +G PG PG  GIPG 
Sbjct: 670 SGLKGEPGAVGPPGEPGYLGLPGIQGKKGDKGNQGERGIQGQKGENGRPGIPGSQGIPGH 729

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNG 239
           +G  G  G+ G PG  G  G  G +G
Sbjct: 730 HGAKGERGEKGEPGARGATGAKGESG 755



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 75/161 (46%), Gaps = 27/161 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G +G KG PG  G PG  G PG +GK G +G  G PG  G PG +G +G  G  G P
Sbjct: 449 GKPGLQGPKGDPGQPGNPGYPGQPGQDGKPGYQGIAGSPGVPGSPGIQGAQGLPGYKGEP 508

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRN---------------------------GMDGIPGKD 223
           GR G  G  GLPG PGL GIPG                             G  G+PG+ 
Sbjct: 509 GRDGEKGDRGLPGFPGLHGIPGSKGEMGPKGEKGSPGFYGKKGAKGEKGNAGFPGLPGRA 568

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG+ G  G  G+ G KG  GP G  G+ G  G PG P  
Sbjct: 569 GEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGSRGEPGIPGF 609



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---IPGKDGLPGKDGI 231
           PG  G +GPKGD G PG        G PG+PG DG PG  G+ G   +PG  G+ G  G+
Sbjct: 448 PGKPGLQGPKGDPGQPGN------PGYPGQPGQDGKPGYQGIAGSPGVPGSPGIQGAQGL 501

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG  G  G  G  G RG  G  G++G+PG+      K E  S
Sbjct: 502 PGYKGEPGRDGEKGDRGLPGFPGLHGIPGSKGEMGPKGEKGS 543


>gi|224048603|ref|XP_002193071.1| PREDICTED: collagen alpha-1(XXI) chain [Taeniopygia guttata]
          Length = 945

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 91/158 (57%), Gaps = 12/158 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKGDMG- 167
           PG  G  G+ G+ G  G  G KGE G+ G+PG+ G    PG  GIPG++G +G KG++G 
Sbjct: 565 PGRSGDPGRNGKDGLPGSPGFKGEVGQPGSPGLEGHRGEPGIPGIPGNQGTKGQKGEIGP 624

Query: 168 --YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---IPGK 222
              PG +G PGD G  GP+G +G PG  G  G  G   EPGL G PG +G  G   IPG 
Sbjct: 625 PGQPGAKGSPGDTGLMGPEGSLGLPGAPGPKGDKG---EPGLQGKPGSSGAKGDLGIPGA 681

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG  GIPGT G  G KG  G +GN G  G+ G+ G
Sbjct: 682 PGEPGYPGIPGTQGLKGLKGEKGRQGNPGLQGVEGLSG 719



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 94/173 (54%), Gaps = 12/173 (6%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     +   PGL+G  G+ G  G  G  G KG++GE G PG    PG +G PGD G  
Sbjct: 584 GFKGEVGQPGSPGLEGHRGEPGIPGIPGNQGTKGQKGEIGPPGQ---PGAKGSPGDTGLM 640

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GP+G +G PG  G  GD+G+ G +G  G  G  G  G  G PGEPG  GIPG  G+ G+ 
Sbjct: 641 GPEGSLGLPGAPGPKGDKGEPGLQGKPGSSGAKGDLGIPGAPGEPGYPGIPGTQGLKGLK 700

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN---------RGKSGINGVPGTPAI 264
           G+ G  G  G+ G  G +GE+G  G +G+         +G+SG+ G+ G P +
Sbjct: 701 GEKGRQGNPGLQGVEGLSGERGEKGEKGDPGIRGISGQKGESGVQGLTGPPGL 753



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 85/165 (51%), Gaps = 6/165 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGDM 166
           GL G  G KGE+G  G  G++G RGE G PG+ G  G +G       PG  G +G  GD 
Sbjct: 578 GLPGSPGFKGEVGQPGSPGLEGHRGEPGIPGIPGNQGTKGQKGEIGPPGQPGAKGSPGDT 637

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  GP+G  G  G  GPKGD G PG  G  G  G  G+ G+ G PG  G  GIPG  GL 
Sbjct: 638 GLMGPEGSLGLPGAPGPKGDKGEPGLQGKPGSSGAKGDLGIPGAPGEPGYPGIPGTQGLK 697

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G  G  G  G  G +G+ G  G RG+ G  G PG   I   K ES
Sbjct: 698 GLKGEKGRQGNPGLQGVEGLSGERGEKGEKGDPGIRGISGQKGES 742



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 90/167 (53%), Gaps = 21/167 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG---Y 168
           PGL GP G+ G  G+ G  G+ G       PG+ GP G  GI G+ GK G KGD G   +
Sbjct: 469 PGLPGPDGKPGYQGSAGTPGIPG------TPGIQGPRGLPGIKGEPGKDGAKGDSGLPGF 522

Query: 169 PGPQGIPGDEGKRGPKGDMGYPG------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           PG  G+P  +G+RGPKGD G PG        G  G  G PG PG  G PGRNG DG+PG 
Sbjct: 523 PGLHGMPAPKGERGPKGDQGVPGIYGKKGSKGEKGDTGFPGLPGRSGDPGRNGKDGLPGS 582

Query: 223 DGLPGKDGIPGTNGTNGEK------GMTGPRGNRGKSGINGVPGTPA 263
            G  G+ G PG+ G  G +      G+ G +G +G+ G  G PG P 
Sbjct: 583 PGFKGEVGQPGSPGLEGHRGEPGIPGIPGNQGTKGQKGEIGPPGQPG 629



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/152 (46%), Positives = 84/152 (55%), Gaps = 15/152 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG+QGP   +G  G KGE G  G +G+ G PG    PG  G+P  +G+RGPKGD G PG 
Sbjct: 493 PGIQGP---RGLPGIKGEPGKDGAKGDSGLPGF---PGLHGMPAPKGERGPKGDQGVPGI 546

Query: 171 -----PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                 +G  GD G  G  G  G PGR   +G+DGLPG PG  G  G+ G  G+ G  G 
Sbjct: 547 YGKKGSKGEKGDTGFPGLPGRSGDPGR---NGKDGLPGSPGFKGEVGQPGSPGLEGHRGE 603

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PG  GIPG  GT G+KG  GP G  G  G  G
Sbjct: 604 PGIPGIPGNQGTKGQKGEIGPPGQPGAKGSPG 635



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 63/108 (58%), Gaps = 3/108 (2%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGY 168
           PG  GP G KGE G +G+ G  G +G+ G PG  G PG  GIPG +G +G KG+    G 
Sbjct: 649 PGAPGPKGDKGEPGLQGKPGSSGAKGDLGIPGAPGEPGYPGIPGTQGLKGLKGEKGRQGN 708

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           PG QG+ G  G+RG KG+ G PG  G+ G+ G  G  GL G PG  G 
Sbjct: 709 PGLQGVEGLSGERGEKGEKGDPGIRGISGQKGESGVQGLTGPPGLRGQ 756


>gi|348528105|ref|XP_003451559.1| PREDICTED: collagen alpha-1(XXVII) chain A-like [Oreochromis
            niloticus]
          Length = 1784

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 71/151 (47%), Positives = 95/151 (62%), Gaps = 12/151 (7%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+ G+ G KG++GV GERG  GAPG+ G PGPQG    +G +G KGD G  G QG  G +
Sbjct: 1307 GEPGDPGYKGQIGVDGERGRPGAPGLPGHPGPQG---QQGPKGAKGDQGQKGKQGQAGPK 1363

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G RGP+G  G  G  G+ GR+G  G PG+DG+PG++G  GIPG+ G  G+ G+PG  G++
Sbjct: 1364 GARGPEGVGGPSGPRGVVGREGQEGVPGVDGVPGKDGSKGIPGEHGDDGEAGLPGKAGSS 1423

Query: 239  GEKGMT---------GPRGNRGKSGINGVPG 260
            G+ G+          GP+G RG  G +G PG
Sbjct: 1424 GKTGVPGLPGDQGAFGPKGERGLPGQSGPPG 1454



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 85/150 (56%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G QGP G KG+ G KG+ G  G +G +G  GV GP GP+G+ G EG+ G  G  G PG
Sbjct: 1338 PQGQQGPKGAKGDQGQKGKQGQAGPKGARGPEGVGGPSGPRGVVGREGQEGVPGVDGVPG 1397

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              G  G  G+ G  G+ G PG+ G  G+ G+PG PG  G  G  G  G+PG+ G PGK G
Sbjct: 1398 KDGSKGIPGEHGDDGEAGLPGKAGSSGKTGVPGLPGDQGAFGPKGERGLPGQSGPPGKRG 1457

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G +G  GP+G  G +G  G PG
Sbjct: 1458 FKGGMGLPGPQGDKGPKGQPGDTGEPGFPG 1487



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 91/174 (52%), Gaps = 24/174 (13%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G KG  G  GE+G++G++G  G PG +G PGPQG  G+ G+ GPKG  G  GP G PGD+
Sbjct: 1015 GAKGPDGPAGEIGLEGKKGPDGPPGKLGFPGPQGKQGEPGETGPKGFSGIQGPSGSPGDK 1074

Query: 179  ------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP------------ 220
                  G  GP+G +G  G  G  G  G  GEPGL G PG  G  G+P            
Sbjct: 1075 GIAGEPGPAGPRGTIGPLGETGQKGPPGKAGEPGLPGEPGEKGAIGLPGNIGEQGLIGQR 1134

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPGTPAICAYK 268
            G+ GL G+ G  G +GT GEKG  G  G++      G+ G  G PG+P     +
Sbjct: 1135 GEPGLEGEAGPAGPDGTKGEKGDMGQEGDKGEKGETGQKGKEGPPGSPGFTGVR 1188



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 96/179 (53%), Gaps = 33/179 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIPGD------------ 156
           PGL+G  G+ G  G +GE+G KG++G +GA   PG+ G PGPQG PG+            
Sbjct: 798 PGLKGDKGEIGIPGEQGEIGFKGDKGVQGAPGLPGIHGKPGPQGKPGEKGPDGTPGPPGP 857

Query: 157 ---------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                          EG +G  G  G PGP+GIPG EG  GP   +G PG  GL+GR G 
Sbjct: 858 EGFPGDMGPPGENGLEGPKGKPGARGLPGPRGIPGLEGDEGP---IGPPGLTGLEGRMGR 914

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG+ G  G  G  GI GK G  G+ G+ G  G  GE G+ G +G+RG+ G+ G PG
Sbjct: 915 QGFPGILGTEGVKGEPGITGKVGPMGERGLVGFIGPVGEAGLAGEKGDRGEMGLPGPPG 973



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 85/162 (52%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G+ GE G KG  G++G  G  G  G+ G PGP G  G  G  G  G  G PG 
Sbjct: 1044 PGPQGKQGEPGETGPKGFSGIQGPSGSPGDKGIAGEPGPAGPRGTIGPLGETGQKGPPGK 1103

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PG  G+ G KG +G PG IG  G  G  GEPGL+G  G  G DG  G+ G  G++G 
Sbjct: 1104 AGEPGLPGEPGEKGAIGLPGNIGEQGLIGQRGEPGLEGEAGPAGPDGTKGEKGDMGQEGD 1163

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
             G  G  G+KG  GP G+ G +G+ G  G P     + +  S
Sbjct: 1164 KGEKGETGQKGKEGPPGSPGFTGVRGPEGKPGKIGERGKPGS 1205



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 88/172 (51%), Gaps = 18/172 (10%)

Query: 117 PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG 176
           P G+KG+ G  G +G+ G+ G KG  G  G PG  G PG++G  G  G  GYPG QG+PG
Sbjct: 635 PKGEKGDSGIIGPVGMIGQPGRKGQKGFPGQPGLPGEPGEQGPVGSPGAKGYPGRQGLPG 694

Query: 177 DEGKRGPKGDMGY---PGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIPGKD------- 223
             G  GPKG  G+   PG  GL   DG  G+PGEPG  G  GR G  G  G+        
Sbjct: 695 PIGPMGPKGVRGFIGIPGLFGLPGPDGERGIPGEPGKRGKMGRPGFPGDFGERGPPGPDG 754

Query: 224 -----GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                G PG +G+PG  G  G  G  GP G  G  G+ G PG P +   K E
Sbjct: 755 EPGNMGAPGPNGVPGLIGDMGPVGQIGPPGPNGLKGVPGNPGEPGLKGDKGE 806



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 91/187 (48%), Gaps = 18/187 (9%)

Query: 100  QGFCNSTKEYCPPGLQGPIG---QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            +G         P G  GP+G   QKG  G  GE G+ GE GEKGA G+ G  G QG+ G 
Sbjct: 1074 KGIAGEPGPAGPRGTIGPLGETGQKGPPGKAGEPGLPGEPGEKGAIGLPGNIGEQGLIGQ 1133

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G+ G +G+ G  GP G  G++G  G +GD G  G  G  G++G PG PG  G+ G  G 
Sbjct: 1134 RGEPGLEGEAGPAGPDGTKGEKGDMGQEGDKGEKGETGQKGKEGPPGSPGFTGVRGPEGK 1193

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVP------GT 261
             G  G+ G PG  G  G  G  GE          G  GP+G+RG  G  G P      G 
Sbjct: 1194 PGKIGERGKPGSKGAKGNQGHLGETGPVGKTGPPGFVGPKGSRGTIGHVGAPGRMGQQGE 1253

Query: 262  PAICAYK 268
            P I  Y+
Sbjct: 1254 PGIAGYE 1260



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 104/250 (41%), Gaps = 66/250 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIG---------QKGEIGAKGEMGVKGERGEKGAPGVVGPP 148
             +GF         PG QGP+G         ++G  G  G MG KG RG  G PG+ G P
Sbjct: 658 GQKGFPGQPGLPGEPGEQGPVGSPGAKGYPGRQGLPGPIGPMGPKGVRGFIGIPGLFGLP 717

Query: 149 GP---QGIPGDEGKRGPKG---------------------DMGYPGPQGIPGDEGKRGPK 184
           GP   +GIPG+ GKRG  G                     +MG PGP G+PG  G  GP 
Sbjct: 718 GPDGERGIPGEPGKRGKMGRPGFPGDFGERGPPGPDGEPGNMGAPGPNGVPGLIGDMGPV 777

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLD------GIPGRNGM------DGIPGKDGLPGKDGIP 232
           G +G PG  GL G  G PGEPGL       GIPG  G        G+ G  GLPG  G P
Sbjct: 778 GQIGPPGPNGLKGVPGNPGEPGLKGDKGEIGIPGEQGEIGFKGDKGVQGAPGLPGIHGKP 837

Query: 233 GTNGTNGEK---------------------GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G  G  GEK                     G  G  G +GK G  G+PG   I   + + 
Sbjct: 838 GPQGKPGEKGPDGTPGPPGPEGFPGDMGPPGENGLEGPKGKPGARGLPGPRGIPGLEGDE 897

Query: 272 CSLLPNSETS 281
             + P   T 
Sbjct: 898 GPIGPPGLTG 907



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 99/218 (45%), Gaps = 58/218 (26%)

Query: 111  PPGLQGPIGQKGEI---GAKGEMGVKGE-------------------------------- 135
            PPG  GP G +G I   GA G MG +GE                                
Sbjct: 1226 PPGFVGPKGSRGTIGHVGAPGRMGQQGEPGIAGYEGHQGPQGPIGPPGPKGEKGEQGDDG 1285

Query: 136  -----------------RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
                             RGE+G PG  G  G  G+ G+ G+ G  G  G+PGPQG  G +
Sbjct: 1286 KVEGPPGPPGDMGPPGDRGERGEPGDPGYKGQIGVDGERGRPGAPGLPGHPGPQGQQGPK 1345

Query: 179  GKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIP 232
            G +   G KG  G  G  G  G +G+ G  G  G+ GR G +G+PG DG+PGKD   GIP
Sbjct: 1346 GAKGDQGQKGKQGQAGPKGARGPEGVGGPSGPRGVVGREGQEGVPGVDGVPGKDGSKGIP 1405

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G +G +GE G+ G  G+ GK+G+ G+PG       K E
Sbjct: 1406 GEHGDDGEAGLPGKAGSSGKTGVPGLPGDQGAFGPKGE 1443



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 94/210 (44%), Gaps = 25/210 (11%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G    T +  P G +G +G  G +G  G  G KG+RGE G PG  G  GP G PG  
Sbjct: 925  GVKGEPGITGKVGPMGERGLVGFIGPVGEAGLAGEKGDRGEMGLPGPPGEKGPTGHPGAP 984

Query: 158  GK---------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
            G+                     RGPKG  G  GP G  G+ G  G KG  G PG++G  
Sbjct: 985  GEAGPTGPPGRPGPPGATGPTGTRGPKGLRGAKGPDGPAGEIGLEGKKGPDGPPGKLGFP 1044

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G  GEPG  G     G  GI G  G PG  GI G  G  G +G  GP G  G+ G  
Sbjct: 1045 GPQGKQGEPGETGP---KGFSGIQGPSGSPGDKGIAGEPGPAGPRGTIGPLGETGQKGPP 1101

Query: 257  GVPGTPAICAYKRESCSL-LPNSETSQLLI 285
            G  G P +     E  ++ LP +   Q LI
Sbjct: 1102 GKAGEPGLPGEPGEKGAIGLPGNIGEQGLI 1131



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 85/173 (49%), Gaps = 21/173 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVGPPGPQ 151
            GL GP G+KG  G  G  G                      +G +G +GA G  GP G  
Sbjct: 967  GLPGPPGEKGPTGHPGAPGEAGPTGPPGRPGPPGATGPTGTRGPKGLRGAKGPDGPAGEI 1026

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G+ G +G  GP G +G+PGPQG  G+ G+ GPKG  G  G  G  G  G+ GEPG  G  
Sbjct: 1027 GLEGKKGPDGPPGKLGFPGPQGKQGEPGETGPKGFSGIQGPSGSPGDKGIAGEPGPAGPR 1086

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G  G+ G PGK G PG  G  GEKG  G  GN G+ G+ G  G P +
Sbjct: 1087 GTIGPLGETGQKGPPGKAGEPGLPGEPGEKGAIGLPGNIGEQGLIGQRGEPGL 1139



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 101/202 (50%), Gaps = 36/202 (17%)

Query: 95  PLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQ 151
           P  A +G    +    P G+ G  G+KG+ G  G+ G+ GE GE+G   +PG  G PG Q
Sbjct: 631 PGPAPKGEKGDSGIIGPVGMIGQPGRKGQKGFPGQPGLPGEPGEQGPVGSPGAKGYPGRQ 690

Query: 152 GIPGDEGKRGPKGDMGY---------PGP---QGIPGDEGKRGPKGDMGYPG-------- 191
           G+PG  G  GPKG  G+         PGP   +GIPG+ GKRG  G  G+PG        
Sbjct: 691 GLPGPIGPMGPKGVRGFIGIPGLFGLPGPDGERGIPGEPGKRGKMGRPGFPGDFGERGPP 750

Query: 192 -------RIGLDGRDGLP------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                   +G  G +G+P      G  G  G PG NG+ G+PG  G PG  G  G  G  
Sbjct: 751 GPDGEPGNMGAPGPNGVPGLIGDMGPVGQIGPPGPNGLKGVPGNPGEPGLKGDKGEIGIP 810

Query: 239 GEKGMTGPRGNRGKSGINGVPG 260
           GE+G  G +G++G  G  G+PG
Sbjct: 811 GEQGEIGFKGDKGVQGAPGLPG 832



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 80/145 (55%), Gaps = 12/145 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G+ G  G  G+ G  G +GE+G PG  GPPG         KRG KG MG PGP
Sbjct: 1417 PGKAGSSGKTGVPGLPGDQGAFGPKGERGLPGQSGPPG---------KRGFKGGMGLPGP 1467

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG  G +G+ G  G+ G+PG +G+ G  G PG+ G  GI G  G  G  G+ G+ G  GI
Sbjct: 1468 QGDKGPKGQPGDTGEPGFPGVLGVFGPRGPPGDFGPKGIRGPKGPQGSVGRRGIVGPVGI 1527

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGIN 256
             G NG  G +G    +GNRG++G  
Sbjct: 1528 IGPNGRAGPRGQ---KGNRGETGAQ 1549



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 97/210 (46%), Gaps = 42/210 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGY 168
            PGL+G    +G IG  G  G++G  G +G PG++G  G +G PG  GK GP G+   +G+
Sbjct: 891  PGLEG---DEGPIGPPGLTGLEGRMGRQGFPGILGTEGVKGEPGITGKVGPMGERGLVGF 947

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
             GP G  G  G++G +G+MG PG  G  G  G PG PG                      
Sbjct: 948  IGPVGEAGLAGEKGDRGEMGLPGPPGEKGPTGHPGAPGEAGPTGPPGRPGPPGATGPTGT 1007

Query: 207  -----------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                        DG  G  G++G  G DG PGK G PG  G  GE G TGP+G  G  G 
Sbjct: 1008 RGPKGLRGAKGPDGPAGEIGLEGKKGPDGPPGKLGFPGPQGKQGEPGETGPKGFSGIQGP 1067

Query: 256  NGVPGTPAICAYKRES---CSLLPNSETSQ 282
            +G PG   I      +    ++ P  ET Q
Sbjct: 1068 SGSPGDKGIAGEPGPAGPRGTIGPLGETGQ 1097



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 95/199 (47%), Gaps = 36/199 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G +G  G+IG  G  G+KG  G  G PG+ G  G  GIPG++G+ G KGD G  G 
Sbjct: 768 PGLIGDMGPVGQIGPPGPNGLKGVPGNPGEPGLKGDKGEIGIPGEQGEIGFKGDKGVQGA 827

Query: 172 QGIPGDEGKRGPKG---------------------DMGYPGRIGLDGRDGLPGE---PGL 207
            G+PG  GK GP+G                     DMG PG  GL+G  G PG    PG 
Sbjct: 828 PGLPGIHGKPGPQGKPGEKGPDGTPGPPGPEGFPGDMGPPGENGLEGPKGKPGARGLPGP 887

Query: 208 DGIPGRNGMD---GIPGKDGLPGK------DGIPGTNGTNGEKGMT---GPRGNRGKSGI 255
            GIPG  G +   G PG  GL G+       GI GT G  GE G+T   GP G RG  G 
Sbjct: 888 RGIPGLEGDEGPIGPPGLTGLEGRMGRQGFPGILGTEGVKGEPGITGKVGPMGERGLVGF 947

Query: 256 NGVPGTPAICAYKRESCSL 274
            G  G   +   K +   +
Sbjct: 948 IGPVGEAGLAGEKGDRGEM 966



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 87/171 (50%), Gaps = 33/171 (19%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           +GA G  GV G  G+ G  G +GPPGP   +G+PG+ G+ G KGD G     GIPG++G+
Sbjct: 759 MGAPGPNGVPGLIGDMGPVGQIGPPGPNGLKGVPGNPGEPGLKGDKGE---IGIPGEQGE 815

Query: 181 RGPKGD---MGYPGRIGLDGRDGLPGEPGLD------------------GIPGRNGMDGI 219
            G KGD    G PG  G+ G+ G  G+PG                    G PG NG++G 
Sbjct: 816 IGFKGDKGVQGAPGLPGIHGKPGPQGKPGEKGPDGTPGPPGPEGFPGDMGPPGENGLEGP 875

Query: 220 ---PGKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGTPAI 264
              PG  GLPG  GIPG  G     G  G+TG  G  G+ G  G+ GT  +
Sbjct: 876 KGKPGARGLPGPRGIPGLEGDEGPIGPPGLTGLEGRMGRQGFPGILGTEGV 926



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 92/202 (45%), Gaps = 48/202 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------VVGPPGPQGIPGD 156
           PGL G  G  GE G  GE G +G+ G  G PG                +G PGP G+PG 
Sbjct: 711 PGLFGLPGPDGERGIPGEPGKRGKMGRPGFPGDFGERGPPGPDGEPGNMGAPGPNGVPGL 770

Query: 157 EGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGR---IGLDGRDGL---PGE 204
            G  GP G +G PGP G+      PG+ G +G KG++G PG    IG  G  G+   PG 
Sbjct: 771 IGDMGPVGQIGPPGPNGLKGVPGNPGEPGLKGDKGEIGIPGEQGEIGFKGDKGVQGAPGL 830

Query: 205 PGLDGIPGRNGMDGIPGKD------------------GLPGKDGIPGTNGTNGEKGMTGP 246
           PG+ G PG  G    PG+                   G PG++G+ G  G  G +G+ GP
Sbjct: 831 PGIHGKPGPQGK---PGEKGPDGTPGPPGPEGFPGDMGPPGENGLEGPKGKPGARGLPGP 887

Query: 247 RGNRGKSGINGVPGTPAICAYK 268
           RG  G  G  G  G P +   +
Sbjct: 888 RGIPGLEGDEGPIGPPGLTGLE 909



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 90/234 (38%), Gaps = 73/234 (31%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            +  QG      E    G  GP G  G  G KG+MG +G++GEKG  G  G  GP G PG 
Sbjct: 1125 IGEQGLIGQRGEPGLEGEAGPAGPDGTKGEKGDMGQEGDKGEKGETGQKGKEGPPGSPGF 1184

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKR---------------------GPKGDMGYPGRIGL 195
             G RGP+G  G  G +G PG +G +                     GPKG  G  G +G 
Sbjct: 1185 TGVRGPEGKPGKIGERGKPGSKGAKGNQGHLGETGPVGKTGPPGFVGPKGSRGTIGHVGA 1244

Query: 196  DGRDGLPGEPGLDGI--------------------------------------------- 210
             GR G  GEPG+ G                                              
Sbjct: 1245 PGRMGQQGEPGIAGYEGHQGPQGPIGPPGPKGEKGEQGDDGKVEGPPGPPGDMGPPGDRG 1304

Query: 211  -------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                   PG  G  G+ G+ G PG  G+PG  G  G++G  G +G++G+ G  G
Sbjct: 1305 ERGEPGDPGYKGQIGVDGERGRPGAPGLPGHPGPQGQQGPKGAKGDQGQKGKQG 1358



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 57/101 (56%), Gaps = 9/101 (8%)

Query: 163 KGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           KGD G    P P+G  GD G  GP G +G PGR    G+ G PG+PGL G PG  G  G 
Sbjct: 624 KGDPGISPGPAPKGEKGDSGIIGPVGMIGQPGR---KGQKGFPGQPGLPGEPGEQGPVGS 680

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G PG+ G+PG  G  G KG+   RG  G  G+ G+PG
Sbjct: 681 PGAKGYPGRQGLPGPIGPMGPKGV---RGFIGIPGLFGLPG 718



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 60/120 (50%), Gaps = 12/120 (10%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA------KGEMGVKGERGEKGA---PGVVG 146
            L   QG      E   PG  GP G++G  G       +G+ G KG+ G+ G    PGV+G
Sbjct: 1431 LPGDQGAFGPKGERGLPGQSGPPGKRGFKGGMGLPGPQGDKGPKGQPGDTGEPGFPGVLG 1490

Query: 147  PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
              GP+G PGD    GPKG  G  GPQG  G  G  GP G +G  GR G  G+ G  GE G
Sbjct: 1491 VFGPRGPPGD---FGPKGIRGPKGPQGSVGRRGIVGPVGIIGPNGRAGPRGQKGNRGETG 1547


>gi|194215132|ref|XP_001499245.2| PREDICTED: collagen alpha-1(XXII) chain [Equus caballus]
          Length = 1632

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/159 (45%), Positives = 89/159 (55%), Gaps = 3/159 (1%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL GP G +G  G KG  G  G  G +G PG +GPPG +G+PG +G  GP G  G  G +
Sbjct: 1270 GLPGPEGARGPPGFKGHTGDSGAPGPRGEPGAMGPPGQEGLPGKDGDIGPTGPQGPQGLR 1329

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI- 231
            G+PG  G  G  GD G PG  G  G  G  G PGL G  G  G  G PG+ G+PGK+G+ 
Sbjct: 1330 GLPGKNGSPGSPGDPGTPGSPGQKGNKGENGSPGLPGFLGPRGPSGEPGEKGVPGKEGVP 1389

Query: 232  --PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              PG  G  GE+G  G +G++G  G  G PG P I  +K
Sbjct: 1390 GRPGEAGPKGERGDPGVKGDKGAPGGKGQPGDPGIPGHK 1428



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 72/137 (52%), Gaps = 3/137 (2%)

Query: 134  GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            GE G  G  G  GPPG +G  GD G  GP+G+   PG  G PG EG  G  GD+G  G  
Sbjct: 1267 GEAGLPGPEGARGPPGFKGHTGDSGAPGPRGE---PGAMGPPGQEGLPGKDGDIGPTGPQ 1323

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G  G  GLPG+ G  G PG  G  G PG+ G  G++G PG  G  G +G +G  G +G  
Sbjct: 1324 GPQGLRGLPGKNGSPGSPGDPGTPGSPGQKGNKGENGSPGLPGFLGPRGPSGEPGEKGVP 1383

Query: 254  GINGVPGTPAICAYKRE 270
            G  GVPG P     K E
Sbjct: 1384 GKEGVPGRPGEAGPKGE 1400



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 86/166 (51%), Gaps = 26/166 (15%)

Query: 117 PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG 176
           P G+KGE G+ G  G+ G +G+ GA G+VG PGP+G  GD G RGP              
Sbjct: 486 PAGEKGEKGSDGPAGLPGPKGDMGATGLVGAPGPKGEKGDVG-RGPF------------- 531

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP------------GKDG 224
            +G++G KG +G PG  G DG  G+ GEPG  G+PG  GM G              G  G
Sbjct: 532 VQGEKGEKGSLGPPGPPGRDGSKGMRGEPGEPGLPGEVGMRGSQGPPGLPGPPGHVGAPG 591

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           L G+ G+ G  G  GE+G+ G  G +G++G  G PG P     + E
Sbjct: 592 LQGERGVKGARGEKGERGLDGFPGKQGETGEQGRPGPPGAAGPQGE 637



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 100/250 (40%), Gaps = 90/250 (36%)

Query: 112  PGLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGVVGPPGPQG------------- 152
            PG +GP G+KG+ G      A G  G +G +GE+GA G VG  G QG             
Sbjct: 1146 PGREGPEGKKGDAGLRGLPGAPGVAGPQGSKGERGADGEVGQKGDQGHPGVPGFMGPPGN 1205

Query: 153  --------------------------------------IPGDEGKR-------------- 160
                                                  IPG+EGK               
Sbjct: 1206 PGPPGAGGIAGAAGPPGIQGPPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGK 1265

Query: 161  -------GPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRD------GLPGE 204
                   GP+G  G PG +G  GD G  GP+G+   MG PG+ GL G+D      G  G 
Sbjct: 1266 TGEAGLPGPEGARGPPGFKGHTGDSGAPGPRGEPGAMGPPGQEGLPGKDGDIGPTGPQGP 1325

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---TGPRGNRGKSGINGVPGT 261
             GL G+PG+NG  G PG  G PG  G  G  G NG  G+    GPRG  G+ G  GVPG 
Sbjct: 1326 QGLRGLPGKNGSPGSPGDPGTPGSPGQKGNKGENGSPGLPGFLGPRGPSGEPGEKGVPGK 1385

Query: 262  PAICAYKRES 271
              +     E+
Sbjct: 1386 EGVPGRPGEA 1395



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 88/208 (42%), Gaps = 63/208 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
            GL G  G++G  G KG+ G+   RG  GAPGV GP G +G  G +G+ G KGD G+PG  
Sbjct: 1141 GLPGKPGREGPEGKKGDAGL---RGLPGAPGVAGPQGSKGERGADGEVGQKGDQGHPGVP 1197

Query: 171  -------------------------------------------PQGIPGDEGKRG----- 182
                                                         GIPG+EGK G     
Sbjct: 1198 GFMGPPGNPGPPGAGGIAGAAGPPGIQGPPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKP 1257

Query: 183  -------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                     G+ G PG  G  G  G  G  G  G PG  G    PG  G PG++G+PG +
Sbjct: 1258 GPPGEPGKTGEAGLPGPEGARGPPGFKGHTGDSGAPGPRGE---PGAMGPPGQEGLPGKD 1314

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G  GP+G RG  G NG PG+P 
Sbjct: 1315 GDIGPTGPQGPQGLRGLPGKNGSPGSPG 1342



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 51/108 (47%), Gaps = 24/108 (22%)

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---------------GRDGLPGEPGLDG 209
           ++G+PG  G PG           G PG+ GL+               G DGLPG+PGL G
Sbjct: 740 EIGFPGKPGFPGQ---------AGPPGKDGLNGPPGLPGPKGEPGERGEDGLPGKPGLRG 790

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G+ G PG+ G  G  G PG  G  GEKG  G +G  G  G+ G
Sbjct: 791 EVGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGEQGEKGELGLPGLKG 838



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 63/153 (41%), Gaps = 37/153 (24%)

Query: 145 VGPPGPQGIPGDEGKRGPKG------------DMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           +G PG  G PG  G  G  G            + G  G  G+PG  G RG  G+ G  GR
Sbjct: 741 IGFPGKPGFPGQAGPPGKDGLNGPPGLPGPKGEPGERGEDGLPGKPGLRGEVGEQGLAGR 800

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK----------- 241
            G  G  GLPG PG  G+ G  G  G  G+ GLP   G+ G  G  GE            
Sbjct: 801 PGEKGEAGLPGAPGFPGVRGEKGEQGEKGELGLP---GLKGDRGEKGEAGPAGPPGLPGT 857

Query: 242 -----------GMTGPRGNRGKSGINGVPGTPA 263
                      G  GP+G +G  G+ G PG+P 
Sbjct: 858 TSLFTPHPRVPGEQGPKGEKGDPGVPGEPGSPG 890



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 72/156 (46%), Gaps = 29/156 (18%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P GL GP G  G  G  G  G KGE+G+ G    V           +G++G KG +G PG
Sbjct: 498 PAGLPGPKGDMGATGLVGAPGPKGEKGDVGRGPFV-----------QGEKGEKGSLGPPG 546

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLD---------------GRDGLPGEPGLDGIPGRNG 215
           P G  G +G RG  G+ G PG +G+                G  GL GE G+ G  G  G
Sbjct: 547 PPGRDGSKGMRGEPGEPGLPGEVGMRGSQGPPGLPGPPGHVGAPGLQGERGVKGARGEKG 606

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G+   DG PGK G  G  G  G  G  GP+G +G
Sbjct: 607 ERGL---DGFPGKQGETGEQGRPGPPGAAGPQGEKG 639



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 39/75 (52%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + GF         PG +G  G++G  G  GE G KGERG+ G  G  G PG +G PGD 
Sbjct: 1363 GLPGFLGPRGPSGEPGEKGVPGKEGVPGRPGEAGPKGERGDPGVKGDKGAPGGKGQPGDP 1422

Query: 158  GKRGPKGDMGYPGPQ 172
            G  G KG  G  GPQ
Sbjct: 1423 GIPGHKGHTGLTGPQ 1437



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 3/59 (5%)

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPG 191
            +G+KG PG  G  GP+G  GD G RG  G  G  GPQG  G+   +G+ G KGD G+PG
Sbjct: 1137 KGDKGLPGKPGREGPEGKKGDAGLRGLPGAPGVAGPQGSKGERGADGEVGQKGDQGHPG 1195


>gi|426336954|ref|XP_004031716.1| PREDICTED: macrophage receptor MARCO isoform 1 [Gorilla gorilla
           gorilla]
          Length = 520

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/170 (45%), Positives = 93/170 (54%), Gaps = 18/170 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +GE+G KG  G++GP G  G         +PG +G RG K
Sbjct: 205 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMK 264

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRN--- 214
           GD   MG PG QG  GD G+ G  G  G+PG  G  G+ GL   PG PG  G PG     
Sbjct: 265 GDAGVMGPPGAQGSKGDSGRPGAPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 324

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G PG+ GLPG  G PG  G  G KG TG +G +G+ G  GVPG   +
Sbjct: 325 GSAGSPGRAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGELGVPGPAGV 374



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 101/193 (52%), Gaps = 21/193 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGK---------R 160
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD G+          
Sbjct: 235 GLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQGSKGDSGRPGAPGLAGFP 294

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD 217
           G KGD G PG QG+PG  G  G  G  G PG  G  GR GL   PG PG  G+ G  G  
Sbjct: 295 GAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGSKGDT 354

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPR---GNRGKSGINGVPGTPAICAYKRES 271
           G+ G+ G  G+ G+PG  G  GE+   G+ GP+   G  G+ G  GV G+      K E 
Sbjct: 355 GLQGQQGRKGELGVPGPAGVKGEQGSPGLAGPKGAPGQAGQKGDQGVKGSSGEQGVKGEK 414

Query: 272 CSLLPNSETSQLL 284
                NS + +++
Sbjct: 415 GERGENSVSVRIV 427



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 82/152 (53%), Gaps = 6/152 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  GA G  G  G +G++G PG+ G PGP G  G  G +G  G  G PG
Sbjct: 272 PPGAQGSKGDSGRPGAPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPG 331

Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G+PG  G       +G KGD G  G+ G  G  G+PG  G+ G  G  G+ G  G  G
Sbjct: 332 RAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGELGVPGPAGVKGEQGSPGLAGPKGAPG 391

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G+ G  G  G++GE+G+ G +G RG++ ++
Sbjct: 392 QAGQKGDQGVKGSSGEQGVKGEKGERGENSVS 423



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 85/210 (40%), Gaps = 75/210 (35%)

Query: 131 GVKGERGEKGAPGV---------------------------------------------- 144
           G+ G +GE+GAPG+                                              
Sbjct: 142 GMFGIKGEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAAGRDGATGPPGPQGPPGVK 201

Query: 145 --VGPPGPQGIPGD---------EGKRGPKGDMGYPGPQ------------GIPGDEGKR 181
              G  GPQG PG          +G++G KGD G  GP+            G+PG +G R
Sbjct: 202 GEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDR 261

Query: 182 GPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G KGD   MG PG  G  G  G PG PGL G PG  G  G PG  G+PG    PG  G  
Sbjct: 262 GMKGDAGVMGPPGAQGSKGDSGRPGAPGLAGFPGAKGDQGQPGLQGVPGP---PGAVGHP 318

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G KG  G  G+ G++G+ G PG+P     K
Sbjct: 319 GAKGEPGSAGSPGRAGLPGSPGSPGATGLK 348



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 55/141 (39%), Gaps = 33/141 (23%)

Query: 164 GDMGYPGPQGIPGDEG------------------KRGPKGDMG---------------YP 190
           G  G  G QG PG +G                  ++G KG  G                 
Sbjct: 142 GMFGIKGEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAAGRDGATGPPGPQGPPGVK 201

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  GL G  G PG+ G  G PG  G  G  G  GL G  G  GT G  G+ G+ G +G+R
Sbjct: 202 GEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDR 261

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  G  GV G P     K +S
Sbjct: 262 GMKGDAGVMGPPGAQGSKGDS 282


>gi|306569349|gb|ADN03207.1| HbP1 [Legionella pneumophila]
          Length = 415

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/188 (42%), Positives = 99/188 (52%), Gaps = 13/188 (6%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG+RGE G  G+ GP G +G  G +G  GPKGD G
Sbjct: 88  EAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRG 147

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 148 EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRG 207

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP-N 277
             G  GLPG     G  G  G +G+ GP+G++G++G  G  G P       +    +P  
Sbjct: 208 EAGPQGLPGPK---GDRGEAGPQGLPGPKGDKGETGAVGPQGMPGPKGEAGDDGQGVPAG 264

Query: 278 SETSQLLI 285
            ET Q+L 
Sbjct: 265 GETGQVLA 272



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 91/165 (55%), Gaps = 21/165 (12%)

Query: 117 PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG 176
           P G +G  G KGE G KG+RGE G  G+ GP G QG  G +G  GPKGD G  GPQG+PG
Sbjct: 52  PSGPQGPKGDKGEAGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPG 111

Query: 177 DEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP- 226
            +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G  G  GLP 
Sbjct: 112 PKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG 171

Query: 227 --------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
                   G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 172 PKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG 216



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/181 (44%), Positives = 96/181 (53%), Gaps = 30/181 (16%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            P G QGP G KGE G KG+ G          KG++GE G  G+ GP G QG  G +G  
Sbjct: 51  IPSGPQGPKGDKGEAGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLP 110

Query: 161 GPKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           GPKGD G  GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+P
Sbjct: 111 GPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLP 170

Query: 212 GRNGMDGIPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVP 259
           G  G  G  G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  G+P
Sbjct: 171 GPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLP 230

Query: 260 G 260
           G
Sbjct: 231 G 231


>gi|351700387|gb|EHB03306.1| Collagen alpha-1(XXVII) chain [Heterocephalus glaber]
          Length = 1992

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 104/212 (49%), Gaps = 27/212 (12%)

Query: 81   HNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG------EMGVKG 134
            H+ P  +L           +G      E  P GLQGP G  GE+G KG      E+G+ G
Sbjct: 1244 HSGPLGFLGIPGPSGPPGAKGLPG---EPGPQGLQGPAGPPGEMGPKGPPGAVGELGLPG 1300

Query: 135  ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
            E G KG  G +G PG QG+ G  G+ G +GD G  GP G+ GD G  GP G+ G  G+ G
Sbjct: 1301 EAGMKGDFGPLGTPGEQGLTGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDGERGEKGQEG 1360

Query: 195  LDGRDGLPGEPGLDGI------PGRN---------GMDGIPGK---DGLPGKDGIPGTNG 236
            L G DG PG PG+ GI      PG+          G  G PG+    G+PG  G PGT G
Sbjct: 1361 LKGEDGHPGPPGITGIRGPEGKPGKQGEKGRMGAKGAKGHPGQLGEMGVPGDSGAPGTPG 1420

Query: 237  TNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G +G  GP G  G+ G+ G PG      +K
Sbjct: 1421 PKGSRGSLGPTGAPGRMGVQGEPGLAGYNGHK 1452



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 81/165 (49%), Gaps = 24/165 (14%)

Query: 111  PPGLQGPIGQKGEIGAKG---------EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            PPG  G +G  GE G KG         E G+ G+RGE G  G  GP GP G+ GD G  G
Sbjct: 1289 PPGAVGELGLPGEAGMKGDFGPLGTPGEQGLTGQRGEPGLEGDSGPAGPDGLKGDRGDPG 1348

Query: 162  P------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            P            KG+ G+PGP GI G  G  G  G  G  GR+G  G  G PG+ G  G
Sbjct: 1349 PDGERGEKGQEGLKGEDGHPGPPGITGIRGPEGKPGKQGEKGRMGAKGAKGHPGQLGEMG 1408

Query: 210  IPGRNGMDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRGNRG 251
            +PG +G  G PG  G  G     G PG  G  GE G+ G  G++G
Sbjct: 1409 VPGDSGAPGTPGPKGSRGSLGPTGAPGRMGVQGEPGLAGYNGHKG 1453



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 84/176 (47%), Gaps = 30/176 (17%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KG +G+ GE G+KG++GE+G PGV G         D G +G KG  G PG
Sbjct: 986  PIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSG---------DPGFQGDKGSQGLPG 1036

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG 227
               +PG  GK GP G +G  G +G  G  G  G PG  G PG NG +G    PG  GLPG
Sbjct: 1037 ---VPGARGKPGPTGRVGNKGSLGFPGAPGPEGFPGDIGPPGDNGPEGSKGKPGARGLPG 1093

Query: 228  KDGIPGTNGTN---------------GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G  G  G                 G+ G  GP G +G  G  G+ G P I   K
Sbjct: 1094 PCGQLGPEGDEGPMGPPGAPGVEGEPGDPGRPGPMGEQGLLGFIGLVGEPGIVGEK 1149



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/122 (47%), Positives = 69/122 (56%), Gaps = 15/122 (12%)

Query: 119 GQKGEIG---------AKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGD- 165
           GQKG++G         AKG+ G+ G  G  G PG     G PGP G PG++G+ GP+G  
Sbjct: 775 GQKGDLGLSPGQAHDGAKGDTGLPGLSGNPGPPGRKGYKGYPGPAGHPGEQGQPGPEGSP 834

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              GYPG QG+PG  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G PG  
Sbjct: 835 GAKGYPGRQGLPGPIGDPGPKGSRGYIGIPGLFGLPGSDGERGLPGVPGKRGKMGRPGLP 894

Query: 224 GL 225
           GL
Sbjct: 895 GL 896



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 76/151 (50%), Gaps = 18/151 (11%)

Query: 100  QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            QG      E   PGL+G   P G  G  G +G+ G  GERGEKG          +G+ G+
Sbjct: 1317 QGLTGQRGE---PGLEGDSGPAGPDGLKGDRGDPGPDGERGEKGQ---------EGLKGE 1364

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G  GP G  G  GP+G PG +G++G  G  G  G  G  G  G+PG+ G  G PG  G 
Sbjct: 1365 DGHPGPPGITGIRGPEGKPGKQGEKGRMGAKGAKGHPGQLGEMGVPGDSGAPGTPGPKGS 1424

Query: 217  DGIPGKDGLPGKDGI---PGTNGTNGEKGMT 244
             G  G  G PG+ G+   PG  G NG KG+ 
Sbjct: 1425 RGSLGPTGAPGRMGVQGEPGLAGYNGHKGIV 1455



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 88/199 (44%), Gaps = 51/199 (25%)

Query: 113  GLQGPIGQKGEIGAKGE---------------MGVKGERGEKG---------------AP 142
            G +GP G  GE G++G+                G  GE+G  G               A 
Sbjct: 1204 GPRGPDGSAGEQGSRGQKGPAGPQGRPGPPGQQGAAGEQGHSGPLGFLGIPGPSGPPGAK 1263

Query: 143  GVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G+ G PGPQG+    G  G+ GPKG  G  G  G+PG+ G +G  G +G PG  GL G+ 
Sbjct: 1264 GLPGEPGPQGLQGPAGPPGEMGPKGPPGAVGELGLPGEAGMKGDFGPLGTPGEQGLTGQR 1323

Query: 200  GLP------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G P                  G+PG DG  G  G +G+ G+DG PG  GI G  G  G+ 
Sbjct: 1324 GEPGLEGDSGPAGPDGLKGDRGDPGPDGERGEKGQEGLKGEDGHPGPPGITGIRGPEGKP 1383

Query: 242  GMTGPRGNRGKSGINGVPG 260
            G  G +G  G  G  G PG
Sbjct: 1384 GKQGEKGRMGAKGAKGHPG 1402



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 76/153 (49%), Gaps = 24/153 (15%)

Query: 129  EMGVKGERGEKGAPGVVGPPGPQGIP---------GDEGKRGPKGDMGYPGPQ------- 172
            + G  G+ GE+G PG+ G PG  G+P         GD G  GP   +GYPGP+       
Sbjct: 944  QGGFPGDFGERGLPGLDGNPGDLGLPGPPGVPGLIGDMGALGP---IGYPGPKGMKGLMG 1000

Query: 173  -----GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
                 G+ GD+G++G  G  G PG  G  G  GLPG PG  G PG  G  G  G  G PG
Sbjct: 1001 SVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSQGLPGVPGARGKPGPTGRVGNKGSLGFPG 1060

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G  G  G  GP G++GK G  G+PG
Sbjct: 1061 APGPEGFPGDIGPPGDNGPEGSKGKPGARGLPG 1093



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 91/224 (40%), Gaps = 78/224 (34%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
            PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 804  PGPPGRKGYKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPIGDPGPKGSRGYIGI 863

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------------------- 203
            PG  G+PG +G+R   G  G PG+ G  GR GLPG                         
Sbjct: 864  PGLFGLPGSDGER---GLPGVPGKRGKMGRPGLPGLGSSISPALSLPIAIVDGGEVGTGE 920

Query: 204  --EP-------------GLD-----GIPGRNGMDGIPGKD-------------------- 223
              EP             GL      G PG  G  G+PG D                    
Sbjct: 921  GSEPSGYSGPLCDAVVDGLSLPVQGGFPGDFGERGLPGLDGNPGDLGLPGPPGVPGLIGD 980

Query: 224  -------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   G PG  G+ G  G+ GE G+ G +G +G  G++G PG
Sbjct: 981  MGALGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 1024



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 99/256 (38%), Gaps = 99/256 (38%)

Query: 112  PGLQGPIGQKGE---IGAKGEMGVKGERGE------------------------------ 138
            PG  GP+G++G    IG  GE G+ GE+G+                              
Sbjct: 1122 PGRPGPMGEQGLLGFIGLVGEPGIVGEKGDRGIMGPPGAPGPKGSMGHPGIPGGVGIPGE 1181

Query: 139  ---------------KGAPGVVGPPGPQGIPGDEGKRGPK------------------GD 165
                           +GA G  GP GP G  G++G RG K                  G+
Sbjct: 1182 PGPPGPRGSRGPPGIRGAKGHRGPRGPDGSAGEQGSRGQKGPAGPQGRPGPPGQQGAAGE 1241

Query: 166  MGYPGP---------------QGIPGD------EGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             G+ GP               +G+PG+      +G  GP G+MG  G  G  G  GLPGE
Sbjct: 1242 QGHSGPLGFLGIPGPSGPPGAKGLPGEPGPQGLQGPAGPPGEMGPKGPPGAVGELGLPGE 1301

Query: 205  PGLD------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G+       G PG  G+ G  G+ GL G  G  G +G  G++G  GP G RG+ G  G+
Sbjct: 1302 AGMKGDFGPLGTPGEQGLTGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDGERGEKGQEGL 1361

Query: 259  ------PGTPAICAYK 268
                  PG P I   +
Sbjct: 1362 KGEDGHPGPPGITGIR 1377



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 58/117 (49%), Gaps = 18/117 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGY 168
            PG +G  G  G +G KG +G  G  G +G PG +GPPG   P+G  G  G RG  G  G 
Sbjct: 1038 PGARGKPGPTGRVGNKGSLGFPGAPGPEGFPGDIGPPGDNGPEGSKGKPGARGLPGPCGQ 1097

Query: 169  PGPQG---------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             GP+G                PGD G+ GP G+ G  G IGL G  G+ GE G  GI
Sbjct: 1098 LGPEGDEGPMGPPGAPGVEGEPGDPGRPGPMGEQGLLGFIGLVGEPGIVGEKGDRGI 1154



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 61/118 (51%), Gaps = 12/118 (10%)

Query: 136  RGEKGAPGVVGPPGPQG------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +GE G PG +GPPG +G      +PG +G+ G KG  G  G  G PG  G  GPKG    
Sbjct: 1631 QGESGFPGQLGPPGKRGTEGGTGLPGTQGELGSKGQPGDSGETGFPGVAGLFGPKGP--- 1687

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            PG IG  G  G  G PGL G  G  G  G  G  GLPG+    G  G+ G  G+ GP+
Sbjct: 1688 PGDIGFKGIQGPRGPPGLMGKEGIIGPLGSLGPSGLPGRK---GDKGSRGGWGLQGPK 1742



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 64/137 (46%), Gaps = 7/137 (5%)

Query: 161 GPKGDMGY-PGPQ--GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
           G KGD+G  PG    G  GD G  G  G+ G PGR G  G  G  G PG  G PG     
Sbjct: 775 GQKGDLGLSPGQAHDGAKGDTGLPGLSGNPGPPGRKGYKGYPGPAGHPGEQGQPGPEGSP 834

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA-YKRESCS 273
           G  G PG+ GLPG  G PG  G+ G  G+ G  G  G  G  G+PG P       R    
Sbjct: 835 GAKGYPGRQGLPGPIGDPGPKGSRGYIGIPGLFGLPGSDGERGLPGVPGKRGKMGRPGLP 894

Query: 274 LLPNSETSQLLIPPTIV 290
            L +S +  L +P  IV
Sbjct: 895 GLGSSISPALSLPIAIV 911



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 9/105 (8%)

Query: 99   MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPG 155
            +QG      +  PPG +G  G  G  G +GE+G KG+    GE G PGV G  GP+G PG
Sbjct: 1630 IQGESGFPGQLGPPGKRGTEGGTGLPGTQGELGSKGQPGDSGETGFPGVAGLFGPKGPPG 1689

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            D G +G +      GP+G PG  GK G  G +G  G  GL GR G
Sbjct: 1690 DIGFKGIQ------GPRGPPGLMGKEGIIGPLGSLGPSGLPGRKG 1728



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 52/101 (51%), Gaps = 12/101 (11%)

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRDGLP---GEPGLDGIPGRNGM 216
            MG   P G+PG E     +G+ G+PG++      G +G  GLP   GE G  G PG +G 
Sbjct: 1616 MGTLAPWGLPGGEEI---QGESGFPGQLGPPGKRGTEGGTGLPGTQGELGSKGQPGDSGE 1672

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G PG  GL G  G PG  G  G +G  GP G  GK GI G
Sbjct: 1673 TGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIG 1713



 Score = 43.1 bits (100), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 92/259 (35%), Gaps = 111/259 (42%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------- 147
             M+G   S  E   PGL+G  G++G  G  G+ G +G++G +G PGV G           
Sbjct: 994  GMKGLMGSVGE---PGLKGDKGEQGVPGVSGDPGFQGDKGSQGLPGVPGARGKPGPTGRV 1050

Query: 148  -----------PGPQGIPGD---EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM------ 187
                       PGP+G PGD    G  GP+G  G PG +G+PG  G+ GP+GD       
Sbjct: 1051 GNKGSLGFPGAPGPEGFPGDIGPPGDNGPEGSKGKPGARGLPGPCGQLGPEGDEGPMGPP 1110

Query: 188  ---------GYPGRIG------LDGRDGLPGEPGLDGIPGRNGM---------------- 216
                     G PGR G      L G  GL GEPG+ G  G  G+                
Sbjct: 1111 GAPGVEGEPGDPGRPGPMGEQGLLGFIGLVGEPGIVGEKGDRGIMGPPGAPGPKGSMGHP 1170

Query: 217  --------------------------DGIPGKDGLPGKDGIPGTNGTNGEK--------- 241
                                       G  G  G  G DG  G  G+ G+K         
Sbjct: 1171 GIPGGVGIPGEPGPPGPRGSRGPPGIRGAKGHRGPRGPDGSAGEQGSRGQKGPAGPQGRP 1230

Query: 242  ------------GMTGPRG 248
                        G +GP G
Sbjct: 1231 GPPGQQGAAGEQGHSGPLG 1249



 Score = 42.7 bits (99), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 62/143 (43%), Gaps = 40/143 (27%)

Query: 112  PGLQGPIGQKGEIGAKG------EMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKRGP 162
            PG QG  G+ G  GAKG      EMGV G+ G  G PG  G     GP G PG  G +G 
Sbjct: 1383 PGKQGEKGRMGAKGAKGHPGQLGEMGVPGDSGAPGTPGPKGSRGSLGPTGAPGRMGVQGE 1442

Query: 163  KGDMGYPGPQGI---------------PGDEGK----------------RGPKGDMGYPG 191
             G  GY G +GI                G++GK                RG +G+ G PG
Sbjct: 1443 PGLAGYNGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPMGHRGDRGEPGDPG 1502

Query: 192  RIGLDGRDGLPGEPGLDGIPGRN 214
              G +G  GL G+PG  G P  N
Sbjct: 1503 YPGQEGVHGLRGKPGQQGQPAEN 1525



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGYP 169
            GL GP G  G+IG KG  G +G  G  G  G++GP G   P G+PG +G +G +G  G  
Sbjct: 1680 GLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPLGSLGPSGLPGRKGDKGSRGGWGLQ 1739

Query: 170  GPQ 172
            GP+
Sbjct: 1740 GPK 1742


>gi|403268730|ref|XP_003926420.1| PREDICTED: collagen alpha-1(XXI) chain [Saimiri boliviensis
           boliviensis]
          Length = 957

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 90/161 (55%), Gaps = 9/161 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
           PGL GP G+ G  G  G MG  G +GE G+PG  G  GP+G       PG +G  G KG+
Sbjct: 562 PGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGTPGQDGPRGEPGIPGFPGSQGLMGQKGE 621

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G PG QG  G  G  G  G  G PG+ G+ G  G  GEPG+ G+PG +G+ G PG  G 
Sbjct: 622 IGPPGQQGKKGAPGIPGLMGSNGSPGQPGMPGSKGSKGEPGIQGMPGASGLKGEPGAMGT 681

Query: 226 PGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG+    G+PG  G  G+KG  G +G +G+ G NG  G P 
Sbjct: 682 PGEPGYMGLPGIQGKKGDKGNQGEKGVQGQKGENGRQGIPG 722



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/156 (43%), Positives = 87/156 (55%), Gaps = 9/156 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  G +G +G KGE+G  G++G+KGAPG+ G  G  G PG  G  G KG  G PG 
Sbjct: 604 PGIPGFPGSQGLMGQKGEIGPPGQQGKKGAPGIPGLMGSNGSPGQPGMPGSKGSKGEPGI 663

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---------PGEPGLDGIPGRNGMDGIPGK 222
           QG+PG  G +G  G MG PG  G  G  G+          GE G+ G  G NG  GIPG 
Sbjct: 664 QGMPGASGLKGEPGAMGTPGEPGYMGLPGIQGKKGDKGNQGEKGVQGQKGENGRQGIPGP 723

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G+ G  G  G  G  GE G+ G  G +G+SG++G+
Sbjct: 724 QGIQGHHGAKGERGEKGEPGIRGDIGPKGESGVDGL 759



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 94/186 (50%), Gaps = 36/186 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG QG  G +G  G KGE G  G++G++G PG    PG  G+PG +G+ G KGD      
Sbjct: 490 PGTQGIQGARGLPGYKGEPGRDGDKGDRGLPGF---PGLHGMPGSKGEMGAKGDKGAPGF 546

Query: 167 ----------------GYPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGL 207
                           G PGP G PG  GK G  G  G+ G     G  G+DG  GEPG+
Sbjct: 547 YGKKGAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGTPGQDGPRGEPGI 606

Query: 208 DGIPGRNGM---------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G PG  G+          G  GK G PG  G+ G+NG+ G+ GM G +G++G+ GI G+
Sbjct: 607 PGFPGSQGLMGQKGEIGPPGQQGKKGAPGIPGLMGSNGSPGQPGMPGSKGSKGEPGIQGM 666

Query: 259 PGTPAI 264
           PG   +
Sbjct: 667 PGASGL 672



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 92/167 (55%), Gaps = 18/167 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           PGL G  G KGE+GAKG+ G  G         E+G  G PG+   PGP G PG  GK G 
Sbjct: 523 PGLHGMPGSKGEMGAKGDKGAPGFYGKKGAKGEKGNAGFPGL---PGPAGEPGRHGKDGL 579

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G  G+ G  G PG  G+ GP+G+    G+PG  GL G+ G  G PG  G  G  G+ G+
Sbjct: 580 MGSPGFKGEAGSPGTPGQDGPRGEPGIPGFPGSQGLMGQKGEIGPPGQQGKKGAPGIPGL 639

Query: 220 PGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPA 263
            G +G PG+ G+PG+ G+ GE   +GM G  G +G+ G  G PG P 
Sbjct: 640 MGSNGSPGQPGMPGSKGSKGEPGIQGMPGASGLKGEPGAMGTPGEPG 686



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 79/173 (45%), Gaps = 33/173 (19%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G +G KG PG+ G PG  G PG +GK G +G  G PG  G  G +G RG  G  G P
Sbjct: 449 GKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGHQGIAGTPGVPGTQGIQGARGLPGYKGEP 508

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRN---------------------------GMDGIPGKD 223
           GR G  G  GLPG PGL G+PG                             G  G+PG  
Sbjct: 509 GRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGAPGFYGKKGAKGEKGNAGFPGLPGPA 568

Query: 224 GLP---GKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G P   GKDG+   PG  G  G  G  G  G RG+ GI G PG+  +   K E
Sbjct: 569 GEPGRHGKDGLMGSPGFKGEAGSPGTPGQDGPRGEPGIPGFPGSQGLMGQKGE 621



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 64/128 (50%), Gaps = 18/128 (14%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   S      PG+ G  G KGE G +G  G  G +GE GA G  G PG  G+PG +
Sbjct: 635 GIPGLMGSNGSPGQPGMPGSKGSKGEPGIQGMPGASGLKGEPGAMGTPGEPGYMGLPGIQ 694

Query: 158 GKRGPKGDMG---------------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           GK+G KG+ G                PGPQGI G  G +G +G+ G P   G+ G  G  
Sbjct: 695 GKKGDKGNQGEKGVQGQKGENGRQGIPGPQGIQGHHGAKGERGEKGEP---GIRGDIGPK 751

Query: 203 GEPGLDGI 210
           GE G+DG+
Sbjct: 752 GESGVDGL 759



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 43/91 (47%), Gaps = 19/91 (20%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP-------------------GT 234
           GL GRDG+PG  G+ G PG  G+ GIPG++G  G  G                       
Sbjct: 846 GLPGRDGVPGLMGVPGRPGVRGLKGIPGRNGEKGSQGFGYPGEQGPPGPPGPEGPPGISK 905

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G  G+ G+ G  G+ GK GI G PG P IC
Sbjct: 906 EGPAGDPGVPGKDGDHGKPGIQGQPGPPGIC 936


>gi|209559362|ref|YP_002285834.1| SclB protein [Streptococcus pyogenes NZ131]
 gi|209540563|gb|ACI61139.1| SclB protein [Streptococcus pyogenes NZ131]
          Length = 365

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/160 (46%), Positives = 94/160 (58%), Gaps = 9/160 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP+G +G+ G KGE G+ G+ GE+G  G  GP G  G  G +G  GPKG  G  G Q
Sbjct: 107 GPAGPVGPRGDKGEKGEQGLPGKDGEQGERGPQGPAGKDGEAGAQGPAGPKGPRGEKGEQ 166

Query: 173 GIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G +G+RGP    G  G  G+ GL G+DG  G+ G DG+PG++G DG  GKDGLPGKD
Sbjct: 167 GPAGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGKDGLPGKD 226

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGI------NGVPGTPA 263
           G  G +G +G  G  G  G  GK G+      +G PG PA
Sbjct: 227 GKDGQDGKDGLPGKDGKDGQDGKDGLPGKDGKDGQPGKPA 266



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/151 (46%), Positives = 85/151 (56%), Gaps = 9/151 (5%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG      E    G QGP G+ GE GA+G  G KG RGEKG        GP G  G+ G 
Sbjct: 124 QGLPGKDGEQGERGPQGPAGKDGEAGAQGPAGPKGPRGEKGE------QGPAGKDGERGP 177

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            GP G  G  G  G+PG +GK G  G  G PG+ G DG+DG  G PG DG  G++G DG+
Sbjct: 178 VGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGQDGKDGL 237

Query: 220 P---GKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           P   GKDG  GKDG+PG +G +G+ G   P+
Sbjct: 238 PGKDGKDGQDGKDGLPGKDGKDGQPGKPAPK 268



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 90/160 (56%), Gaps = 12/160 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPG---DEGKRGPK 163
           G QGP+G     G  GE+G +G+RGE G  G VGP       G QG+PG   ++G+RGP+
Sbjct: 83  GDQGPVG---PAGKDGEVGPRGDRGETGPAGPVGPRGDKGEKGEQGLPGKDGEQGERGPQ 139

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G  G  G  G  G +GP+G+ G  G  G DG  G  G  G DG  G++G+ G  GKD
Sbjct: 140 GPAGKDGEAGAQGPAGPKGPRGEKGEQGPAGKDGERGPVGPAGKDGQNGKDGLPGKDGKD 199

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  GKDG+PG +G +G+ G  G  G  GK G +G  G P 
Sbjct: 200 GQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGQDGKDGLPG 239


>gi|194211149|ref|XP_001495021.2| PREDICTED: collagen alpha-1(XXIV) chain [Equus caballus]
          Length = 1709

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/181 (45%), Positives = 99/181 (54%), Gaps = 25/181 (13%)

Query: 112  PGLQGPIGQKGEIGAKGE----------------MGVKGERGEKGAPGV---VGPPGPQG 152
            PGL G  G KGE G  GE                MG +GERGE GA G    VG PGP+G
Sbjct: 1173 PGLSGLPGPKGEKGYPGEDNTILGPPGPRGEPGPMGEQGERGEPGAEGYKGHVGIPGPRG 1232

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                 G++GP G+ G  G QG+ G+ G  GPKG  G PG  G  G  GLPG PG  G+ G
Sbjct: 1233 A---TGQQGPPGEPGDCGEQGLKGERGSEGPKGKKGAPGPSGKPGIPGLPGLPGPKGVQG 1289

Query: 213  RNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
             +G DGI   PGK GLPGK G+PG  G+ G  G+ G  G RG  G +G+PG+P +   K 
Sbjct: 1290 YHGADGISGNPGKAGLPGKQGLPGIRGSPGRAGLVGSPGPRGAKGSSGLPGSPGVPGPKG 1349

Query: 270  E 270
            E
Sbjct: 1350 E 1350



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 98/169 (57%), Gaps = 15/169 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGP---QGIPGDEGKRGPK 163
            G+QG  G+KG+ G KG  G+       GERG +G PG+ GPPG    +G+ G+ G RG +
Sbjct: 934  GIQGAKGEKGDQGKKGPYGLIGKTGNPGERGVQGKPGLQGPPGSTGDRGLAGEPGPRGLQ 993

Query: 164  GDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GD G PG    +G+ G EG+ G +G+ G  G +G  G  G+ GEPGL G PG  G +G+ 
Sbjct: 994  GDPGAPGEMGAEGLSGIEGESGLQGEPGAKGDVGPAGSVGVAGEPGLRGEPGAAGEEGLQ 1053

Query: 221  GKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            GKDGL   PG+ G PG +G  GE G+ G  G  G+ G+ G PG   I  
Sbjct: 1054 GKDGLKGDPGERGFPGEDGEKGETGLPGATGPLGRPGLMGPPGPEGIVG 1102



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 97/175 (55%), Gaps = 27/175 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +G+ GAKG  G+ G RGE+G PG+ G  G +G PG +G  GP+G+   PGP+
Sbjct: 553 GLMGPPGMQGDKGAKGHPGLPGLRGEQGIPGLTGNIGSRGYPGRQGLAGPEGN---PGPK 609

Query: 173 GI------PGDEGKRGPKGDMGYP---GRIGLDGRDGLPGE------PGLDGIPGRNGMD 217
           GI      PG+ G+ GP+G+ G P   G+ GL GR G PG+       G DG PG  G  
Sbjct: 610 GIRGFIGSPGEVGQLGPEGERGVPGVRGKKGLKGRQGFPGDFGDRGPAGPDGSPGLVGSV 669

Query: 218 GIPGKDGLPGK---------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G PG  GL G           G PG  G +G KG+ G +G++G+ G  G PG P 
Sbjct: 670 GPPGFPGLTGSVGPMGPIGPSGTPGPMGLSGNKGLPGIKGDKGEQGTAGDPGEPG 724



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 91/167 (54%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V + G   +T +  PPG  G  G++G    KGE G +G +G+KGAPG   P G  GIPG 
Sbjct: 1225 VGIPGPRGATGQQGPPGEPGDCGEQG---LKGERGSEGPKGKKGAPG---PSGKPGIPGL 1278

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G  GPKG  GY G  GI G+ GK G  G  G PG  G  GR GL G PG  G  G +G+
Sbjct: 1279 PGLPGPKGVQGYHGADGISGNPGKAGLPGKQGLPGIRGSPGRAGLVGSPGPRGAKGSSGL 1338

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G PG  G  G+ G+ G  G  G++G  G +G++G  G  G+ G P 
Sbjct: 1339 PGSPGVPGPKGEQGLTGQPGIQGKRGQRGAQGDQGPCGEPGLKGQPG 1385



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 91/180 (50%), Gaps = 27/180 (15%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +G+ G RG   ++G PG  G  G QG+ G+ G  GPKG  G PGP
Sbjct: 1210 QGERGEPGAEGYKGHVGIPGPRGATGQQGPPGEPGDCGEQGLKGERGSEGPKGKKGAPGP 1269

Query: 172  QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G   IPG  G  GPKG  GY         PG+ GL G+ GLPG   + G PGR G+ G 
Sbjct: 1270 SGKPGIPGLPGLPGPKGVQGYHGADGISGNPGKAGLPGKQGLPG---IRGSPGRAGLVGS 1326

Query: 220  PG------KDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG        GLPG  G+P   G  G  G+ G+ G RG RG  G  G  G P +     E
Sbjct: 1327 PGPRGAKGSSGLPGSPGVPGPKGEQGLTGQPGIQGKRGQRGAQGDQGPCGEPGLKGQPGE 1386



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 93/182 (51%), Gaps = 21/182 (11%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E  P GLQG  G  GE+GA+G  G++GE G +G PG  G  GP G  G  G+ G +G+ G
Sbjct: 986  EPGPRGLQGDPGAPGEMGAEGLSGIEGESGLQGEPGAKGDVGPAGSVGVAGEPGLRGEPG 1045

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIPG 221
              G +G+ G +G +G  G+ G+PG  G  G  GLP      G PGL G PG  G+ GI G
Sbjct: 1046 AAGEEGLQGKDGLKGDPGERGFPGEDGEKGETGLPGATGPLGRPGLMGPPGPEGIVGILG 1105

Query: 222  KDGLPGKD---------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            + G PGK                G PG  G +G KG  G RG  G  G+ G  G P I  
Sbjct: 1106 QRGRPGKKGDKGQIGPTGEIGSRGAPGKIGESGPKGARGTRGAVGHLGLMGPNGEPGIPG 1165

Query: 267  YK 268
            Y+
Sbjct: 1166 YR 1167



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 91/164 (55%), Gaps = 6/164 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+G  G  GE G +G+ G+KG+ GE+G PG  G  G  G+PG  G  G  G MG PGP
Sbjct: 1038 PGLRGEPGAAGEEGLQGKDGLKGDPGERGFPGEDGEKGETGLPGATGPLGRPGLMGPPGP 1097

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            +GI G  G+R      G PG+ G  G+ G  GE G  G PG+ G  G  G  G  G  G 
Sbjct: 1098 EGIVGILGQR------GRPGKKGDKGQIGPTGEIGSRGAPGKIGESGPKGARGTRGAVGH 1151

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
             G  G NGE G+ G RG++G+ G++G+PG      Y  E  ++L
Sbjct: 1152 LGLMGPNGEPGIPGYRGHQGQPGLSGLPGPKGEKGYPGEDNTIL 1195



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYP 169
           G +G  GQKG  G  G  G+KGE G++G  G +G  GP G+PG+    G  G KG+ G P
Sbjct: 814 GPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSP 873

Query: 170 GPQG------------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GPQG                        +PG  G RGP G  G  GR G  G DGL GE 
Sbjct: 874 GPQGPQGEKGIMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGRRGPRGPDGLSGEQ 933

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G  G  G  G  G  GL GK G PG  G  G+ G+ GP G+ G  G+ G PG
Sbjct: 934 GIQGAKGEKGDQGKKGPYGLIGKTGNPGERGVQGKPGLQGPPGSTGDRGLAGEPG 988



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 82/152 (53%), Gaps = 9/152 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQGP G  G+ G  GE G +G +G+ GAPG +G  G  GI G+ G +G  G  G  GP
Sbjct: 969  PGLQGPPGSTGDRGLAGEPGPRGLQGDPGAPGEMGAEGLSGIEGESGLQGEPGAKGDVGP 1028

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G  G  G+ G +G+ G  G  GL G+DGL G+P         G  G PG+DG  G+ G+
Sbjct: 1029 AGSVGVAGEPGLRGEPGAAGEEGLQGKDGLKGDP---------GERGFPGEDGEKGETGL 1079

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            PG  G  G  G+ GP G  G  GI G  G P 
Sbjct: 1080 PGATGPLGRPGLMGPPGPEGIVGILGQRGRPG 1111



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 80/149 (53%), Gaps = 6/149 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL GP G +G  GA G  G  G+ G   ++G PG+ G PG  G+ G  G RG KG  G 
Sbjct: 1279 PGLPGPKGVQGYHGADGISGNPGKAGLPGKQGLPGIRGSPGRAGLVGSPGPRGAKGSSGL 1338

Query: 169  PGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            PG  G+PG +G++G  G     G  G+ G  G  G  GEPGL G PG +G+ G+ G  G 
Sbjct: 1339 PGSPGVPGPKGEQGLTGQPGIQGKRGQRGAQGDQGPCGEPGLKGQPGEHGVQGLTGFQGF 1398

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            PG  G  G  G  G  G  GP G RG +G
Sbjct: 1399 PGPKGPEGDAGIVGISGPKGPLGQRGNTG 1427



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 76/151 (50%), Gaps = 6/151 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +GP G+KG  G  G+ G+       G PG+ GP G QG  G +G  G  G  G PG Q
Sbjct: 1256 GSEGPKGKKGAPGPSGKPGI------PGLPGLPGPKGVQGYHGADGISGNPGKAGLPGKQ 1309

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+PG  G  G  G +G PG  G  G  GLPG PG+ G  G  G+ G PG  G  G+ G  
Sbjct: 1310 GLPGIRGSPGRAGLVGSPGPRGAKGSSGLPGSPGVPGPKGEQGLTGQPGIQGKRGQRGAQ 1369

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  GE G+ G  G  G  G+ G  G P 
Sbjct: 1370 GDQGPCGEPGLKGQPGEHGVQGLTGFQGFPG 1400



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 93/192 (48%), Gaps = 33/192 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRG- 161
           PGL G  G KG+ G      V GE+G++G  G++GPPG QG         +PG  G++G 
Sbjct: 522 PGLPGAKGPKGDPGFSPGQAVSGEKGDRGLSGLMGPPGMQGDKGAKGHPGLPGLRGEQGI 581

Query: 162 PK-----GDMGYPGPQGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGI 210
           P      G  GYPG QG+ G EG  GPKG  G+       G++G +G  G+PG  G  G+
Sbjct: 582 PGLTGNIGSRGYPGRQGLAGPEGNPGPKGIRGFIGSPGEVGQLGPEGERGVPGVRGKKGL 641

Query: 211 PGRNGM------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            GR G             DG PG  G  G  G PG  G+ G  G  GP G  G  G++G 
Sbjct: 642 KGRQGFPGDFGDRGPAGPDGSPGLVGSVGPPGFPGLTGSVGPMGPIGPSGTPGPMGLSGN 701

Query: 259 PGTPAICAYKRE 270
            G P I   K E
Sbjct: 702 KGLPGIKGDKGE 713



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 82/173 (47%), Gaps = 24/173 (13%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGI 153
           +  +G+        P G  GP G +G IG+ GE+G  G  GE+G PGV G     G QG 
Sbjct: 588 IGSRGYPGRQGLAGPEGNPGPKGIRGFIGSPGEVGQLGPEGERGVPGVRGKKGLKGRQGF 647

Query: 154 PGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLPGE 204
           PGD G RGP G  G P      GP G PG  G  GP G +   G PG +GL G  GLP  
Sbjct: 648 PGDFGDRGPAGPDGSPGLVGSVGPPGFPGLTGSVGPMGPIGPSGTPGPMGLSGNKGLP-- 705

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                     G+ G  G+ G  G  G PG  G  G  G  GP G RGK G +G
Sbjct: 706 ----------GIKGDKGEQGTAGDPGEPGDPGDKGAVGFLGPPGMRGKPGTSG 748



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 84/165 (50%), Gaps = 9/165 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGDM 166
            G  G  G  G+ G  G+ G+ G RG  G  G+VG PGP+G      +PG  G  GPKG+ 
Sbjct: 1292 GADGISGNPGKAGLPGKQGLPGIRGSPGRAGLVGSPGPRGAKGSSGLPGSPGVPGPKGEQ 1351

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G  G  GI G  G+RG +GD G  G  GL G+   PGE G+ G+ G  G  G  G +G  
Sbjct: 1352 GLTGQPGIQGKRGQRGAQGDQGPCGEPGLKGQ---PGEHGVQGLTGFQGFPGPKGPEGDA 1408

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  GI G  G  G++G TGP G  G  G  G  G      ++ E+
Sbjct: 1409 GIVGISGPKGPLGQRGNTGPLGREGIIGPTGRTGPRGEKGFRGET 1453



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 80/158 (50%), Gaps = 15/158 (9%)

Query: 112 PGLQGPIG------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGP 162
           PGL G IG      ++G  G +G  G KG RG  G+PG VG  GP+   G+PG  GK+G 
Sbjct: 582 PGLTGNIGSRGYPGRQGLAGPEGNPGPKGIRGFIGSPGEVGQLGPEGERGVPGVRGKKGL 641

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG       QG PGD G RGP G  G PG +G  G  G PG  G  G  G  G  G PG 
Sbjct: 642 KGR------QGFPGDFGDRGPAGPDGSPGLVGSVGPPGFPGLTGSVGPMGPIGPSGTPGP 695

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL G  G+PG  G  GE+G  G  G  G  G  G  G
Sbjct: 696 MGLSGNKGLPGIKGDKGEQGTAGDPGEPGDPGDKGAVG 733



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 85/174 (48%), Gaps = 21/174 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM- 166
            E  P GL+G +G +G IG  GE G  G  GE G  G +G  G +G PG +G +G KG M 
Sbjct: 827  EPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPQGPQGEKGIMG 886

Query: 167  --------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
                                G  GP G  G +G+RGP+G  G  G  G+ G  G  G+ G
Sbjct: 887  YPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGRRGPRGPDGLSGEQGIQGAKGEKGDQG 946

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G  G PG+ G+ GK G+ G  G+ G++G+ G  G RG  G  G PG
Sbjct: 947  KKGPYGLIGKTGNPGERGVQGKPGLQGPPGSTGDRGLAGEPGPRGLQGDPGAPG 1000



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/132 (43%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q + G++G RG  G MG PG  G  G
Sbjct: 506 KRGPRGIPGPHGNPGLPGLPGAKGPKGDPGFSPGQAVSGEKGDRGLSGLMGPPGMQGDKG 565

Query: 198 RDGLPGEPGL---DGIPGRNG---MDGIPGKDGLPGKDGIPGTN------GTNGEKGMTG 245
             G PG PGL    GIPG  G     G PG+ GL G +G PG        G+ GE G  G
Sbjct: 566 AKGHPGLPGLRGEQGIPGLTGNIGSRGYPGRQGLAGPEGNPGPKGIRGFIGSPGEVGQLG 625

Query: 246 PRGNRGKSGING 257
           P G RG  G+ G
Sbjct: 626 PEGERGVPGVRG 637



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 76/140 (54%), Gaps = 3/140 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
            PG++G  G+ G +G+ G  G KG  G  G+PGV GP G QG+   PG +GKRG +G  G 
Sbjct: 1312 PGIRGSPGRAGLVGSPGPRGAKGSSGLPGSPGVPGPKGEQGLTGQPGIQGKRGQRGAQGD 1371

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             GP G PG +G+ G  G  G  G  G  G  G  G+ G+ GI G  G  G  G  G  G+
Sbjct: 1372 QGPCGEPGLKGQPGEHGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPLGQRGNTGPLGR 1431

Query: 229  DGIPGTNGTNGEKGMTGPRG 248
            +GI G  G  G +G  G RG
Sbjct: 1432 EGIIGPTGRTGPRGEKGFRG 1451



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 91/204 (44%), Gaps = 45/204 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---GY 168
           PG++G  G KG  G  G+ G +G  G  G+PG+VG  GP G PG  G  GP G +   G 
Sbjct: 633 PGVRGKKGLKGRQGFPGDFGDRGPAGPDGSPGLVGSVGPPGFPGLTGSVGPMGPIGPSGT 692

Query: 169 PGPQ---------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM--- 216
           PGP          GI GD+G++G  GD G PG  G  G  G  G PG+ G PG +G    
Sbjct: 693 PGPMGLSGNKGLPGIKGDKGEQGTAGDPGEPGDPGDKGAVGFLGPPGMRGKPGTSGQIGD 752

Query: 217 ------------------DGIPGKDGLPGKDGIPG---------TNGTNGEKGMTGPRGN 249
                              GIPG++G  G  G+ G           GT GE+G  GP G 
Sbjct: 753 PGPQGPLGPPGPEGFPGDIGIPGQNGPEGSKGLLGHRGPPGPPGLKGTQGEEGPIGPFGE 812

Query: 250 ---RGKSGINGVPGTPAICAYKRE 270
              RGK G  G  G P     K E
Sbjct: 813 LGPRGKPGQKGYAGEPGPEGLKGE 836



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 84/180 (46%), Gaps = 33/180 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G KG +G +G  G   +KG +GE+G  G  G  GP+G PG       KG  G 
Sbjct: 774 PGQNGPEGSKGLLGHRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQ------KGYAGE 827

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP+G+      +G  GD G  G+IG  G  GLPGE G+ G  G  G  G PG  G  G+
Sbjct: 828 PGPEGL------KGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPQGPQGE 881

Query: 229 DGI------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            GI                  PG  G  G  G  GP+G RG  G +G+ G   I   K E
Sbjct: 882 KGIMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGRRGPRGPDGLSGEQGIQGAKGE 941



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 63/114 (55%), Gaps = 9/114 (7%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY-PGRI-----GLDGRDGLPGEPGLDGIPG 212
           KRGP+G  G  G  G+PG  G +GPKGD G+ PG+      G  G  GL G PG+ G  G
Sbjct: 506 KRGPRGIPGPHGNPGLPGLPGAKGPKGDPGFSPGQAVSGEKGDRGLSGLMGPPGMQGDKG 565

Query: 213 RNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G+P   G+ G+PG  G  G+ G  G +G+ GP GN G  GI G  G+P 
Sbjct: 566 AKGHPGLPGLRGEQGIPGLTGNIGSRGYPGRQGLAGPEGNPGPKGIRGFIGSPG 619



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 92   SRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---P 148
             R  LV   G   +      PG  G  G KGE G  G+ G++G+RG++GA G  GP   P
Sbjct: 1319 GRAGLVGSPGPRGAKGSSGLPGSPGVPGPKGEQGLTGQPGIQGKRGQRGAQGDQGPCGEP 1378

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G +G PG+ G +G  G  G+PGP+G  GD    G  GPKG +G  G  G  GR+G+ G  
Sbjct: 1379 GLKGQPGEHGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPLGQRGNTGPLGREGIIGPT 1438

Query: 206  GLDGIPGRNGMDG 218
            G  G  G  G  G
Sbjct: 1439 GRTGPRGEKGFRG 1451



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 88/182 (48%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-------------------- 152
           GL G  G KGE G  G+ G  G+ G+KGA G +GPPG +G                    
Sbjct: 703 GLPGIKGDKGEQGTAGDPGEPGDPGDKGAVGFLGPPGMRGKPGTSGQIGDPGPQGPLGPP 762

Query: 153 ----------IPGDEGKRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLD 196
                     IPG  G  G KG +G+ GP      +G  G+EG  GP G++G  G+ G  
Sbjct: 763 GPEGFPGDIGIPGQNGPEGSKGLLGHRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQK 822

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G PG  GL G  G  G  G  G+    GLPG+ G+ G+ G  GE+G  GP+G +G+ 
Sbjct: 823 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPQGPQGEK 882

Query: 254 GI 255
           GI
Sbjct: 883 GI 884


>gi|170037656|ref|XP_001846672.1| collagen IV alpha 1 chain [Culex quinquefasciatus]
 gi|167880956|gb|EDS44339.1| collagen IV alpha 1 chain [Culex quinquefasciatus]
          Length = 1674

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/173 (46%), Positives = 100/173 (57%), Gaps = 28/173 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PGLQGP G++GE G KGE G+ G      APG+ GPPGP G+ GD+G  GP         
Sbjct: 883  PGLQGPKGERGEKGDKGEFGLTG------APGLTGPPGPLGMKGDKGLMGPPGLEGLPGF 936

Query: 163  ---KGDMGYPGPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDGL------PGEPGLDGI 210
               KGD G+ G  G+PG+ G   ++G KG+ G PG  G+DGR GL       GEPGL G 
Sbjct: 937  GGEKGDRGFTGAPGLPGEPGASSEKGQKGEPGAPGLRGVDGRPGLNGMVGIKGEPGLPGY 996

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             GR G  G  G  G PG DG+ G NG  G+ G+TG  G +G  GI+G+PG P 
Sbjct: 997  -GRQGATGEKGDRGNPGLDGLAGLNGQKGDAGVTGFPGIKGDKGISGLPGIPG 1048



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 96/185 (51%), Gaps = 28/185 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
           PG  G  G  GE G  GEMG+ G  G +GAPG  G PG  GIPG +G+RG          
Sbjct: 526 PGRPGTPGPSGERGYPGEMGIDGSPGLRGAPGQKGEPGLAGIPGADGERGESAIVDLNQI 585

Query: 163 ------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
                 +G+ G PGP G  GD G RGP G  G  G  G  G  G PGEPG+DG PG +G 
Sbjct: 586 KPEKGERGERGEPGPYGPKGDIGPRGPIGQPGQRGFTGPKGDKGRPGEPGIDGTPGASGR 645

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           DG PGK G    + I G +G  G  G  G +G++G +G+ G  G   +CA      S+ P
Sbjct: 646 DGTPGKPG----ESIRGESGAKGNPGYPGLKGDKGYAGLKGEAG---VCA------SIPP 692

Query: 277 NSETS 281
           N E +
Sbjct: 693 NLEAA 697



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 93/201 (46%), Gaps = 20/201 (9%)

Query: 86  VWLNAYSRIPLVAMQGFCNSTKEYCP--PGLQGPIGQKGEIGAKGEMGVKGERGEKGA-- 141
           VW           + G     KE  P  PG  G  G+KGE G  G  G+KGERG+KG   
Sbjct: 444 VWQGQKGEAGFKGLMGAPGDAKEGRPGLPGRPGRDGEKGESGRPGLPGLKGERGDKGEIG 503

Query: 142 -------PGVVGPPGPQG---IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
                  PG+ G  G +G    PG  G  GP G+ GYPG  GI G  G RG  G  G PG
Sbjct: 504 GRCSDCRPGMKGEKGERGYDGTPGRPGTPGPSGERGYPGEMGIDGSPGLRGAPGQKGEPG 563

Query: 192 RIGLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G+ G DG  GE  +  +       G  G  G PG  G  G  G  G  G  G++G TG
Sbjct: 564 LAGIPGADGERGESAIVDLNQIKPEKGERGERGEPGPYGPKGDIGPRGPIGQPGQRGFTG 623

Query: 246 PRGNRGKSGINGVPGTPAICA 266
           P+G++G+ G  G+ GTP    
Sbjct: 624 PKGDKGRPGEPGIDGTPGASG 644



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 76/146 (52%), Gaps = 15/146 (10%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           KG RG  G PG+ GP G QG  G EG  G KG  G PGP G  G +G RG +G  GYPG 
Sbjct: 76  KGNRGFPGPPGLQGPKGMQGFTGAEGLPGSKGSKGEPGPIGPLGVKGDRGREGLPGYPGV 135

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGE--------- 240
            G +G  G+ G PG+ G+ G NG DG+PG  GL   PG  G PG  G  GE         
Sbjct: 136 PGTNGLPGVAGAPGIPGVDGCNGTDGLPGLPGLKGEPGPRGYPGIRGDKGEKGEGAREPE 195

Query: 241 ---KGMTGPRGNRGKSGINGVPGTPA 263
              KG  G  G+ G  G+ G  G+P 
Sbjct: 196 NYNKGQKGEPGHDGAEGLQGRQGSPG 221



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 76/150 (50%), Gaps = 12/150 (8%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPGLQGP G +G  GA+G  G KG +GE       GP GP G+ GD G+       G PG
Sbjct: 84  PPGLQGPKGMQGFTGAEGLPGSKGSKGEP------GPIGPLGVKGDRGRE------GLPG 131

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
             G+PG  G  G  G  G PG  G +G DGLPG PGL G PG  G  GI G  G  G+  
Sbjct: 132 YPGVPGTNGLPGVAGAPGIPGVDGCNGTDGLPGLPGLKGEPGPRGYPGIRGDKGEKGEGA 191

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               N   G+KG  G  G  G  G  G PG
Sbjct: 192 REPENYNKGQKGEPGHDGAEGLQGRQGSPG 221



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 109/265 (41%), Gaps = 83/265 (31%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            MQGF  +       GL G  G KGE G  G +GVKG+RG +G PG  G PG  G+PG  
Sbjct: 92  GMQGFTGAE------GLPGSKGSKGEPGPIGPLGVKGDRGREGLPGYPGVPGTNGLPGVA 145

Query: 158 GK---------------------RGPKGDMGYPGPQGIPGDEGK---------RGPKGDM 187
           G                      +G  G  GYPG +G  G++G+         +G KG+ 
Sbjct: 146 GAPGIPGVDGCNGTDGLPGLPGLKGEPGPRGYPGIRGDKGEKGEGAREPENYNKGQKGEP 205

Query: 188 GYPGRIGLDGRDGLPGEPG--------------------------LDGIPGRNGMDGIP- 220
           G+ G  GL GR G PGE G                          + GI G  G  G+  
Sbjct: 206 GHDGAEGLQGRQGSPGERGSEGRPGQPGIPGPGGPKGDKGIKGFCIKGIKGEKGEKGVEI 265

Query: 221 -------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
                        G+ G  G DG+PG +G  G+ G  GP G+RG  G  G+PG P     
Sbjct: 266 GSVSGSETVTGPQGQKGDKGIDGVPGISGEKGQAGERGPSGDRGLKGEKGLPGQPGPRVP 325

Query: 268 K-------RESCSLLPNSETSQLLI 285
           K       R  C + P+ +  Q+++
Sbjct: 326 KVNLEETVRLDCKVFPDRQVLQVVV 350



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 107/277 (38%), Gaps = 99/277 (35%)

Query: 83   NPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA- 141
            N  V +     +P    QG      +   PGL G  G  G+ G  G  G  G +G+KG  
Sbjct: 982  NGMVGIKGEPGLPGYGRQGATGEKGDRGNPGLDGLAGLNGQKGDAGVTGFPGIKGDKGIS 1041

Query: 142  --------PGVVGPPGPQGIP------------------GDEGKRGPKGD---------M 166
                    PG+ G PGP+G P                  G+ G+RG KGD         M
Sbjct: 1042 GLPGIPGSPGMDGAPGPEGAPGLAGLNGEKGSKGEAGRIGERGERGEKGDLGPPGPPGYM 1101

Query: 167  GYPGPQGIPGDEGK-------RGPKGDMGYPGRIGLDGRDGLP----------------- 202
            G  G +G+PG+ G        +G KG+ G+PG +GL G+ GLP                 
Sbjct: 1102 GLKGDRGVPGERGTPATVEAIKGDKGESGFPGPVGLPGKPGLPGLVGDMGLQGPPGAQGQ 1161

Query: 203  ---------------------------------GEPGLDGIPGRNGMDGIPGKDGLPGKD 229
                                             GE GL G PG+NG DG PG  G  G  
Sbjct: 1162 PGFPGPPGLNGLQGMKGDIGLIGEKGEPCPVVKGEKGLPGRPGKNGRDGGPGPVGEKGDK 1221

Query: 230  GIPGTNGTNGEKGMTGP------RGNRGKSGINGVPG 260
            G+PG  G  G  G+ GP      +G+RG SGI G PG
Sbjct: 1222 GLPGLAGPQGMPGLPGPLGRQGEKGDRGDSGIEGRPG 1258



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 81/160 (50%), Gaps = 18/160 (11%)

Query: 132  VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY-- 189
            V+G  G  G  G  GPPG  G+ G +G++G +G  G  G  G+ G +G+RG KGD G   
Sbjct: 843  VQGVIGWPGQKGDTGPPGNDGMKGFQGRKGVQGLPGAAGLPGLQGPKGERGEKGDKGEFG 902

Query: 190  ----------PGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLPGKDGIPGTNG 236
                      PG +G+ G  GL G PGL+G+P   G  G  G  G  GLPG+ G     G
Sbjct: 903  LTGAPGLTGPPGPLGMKGDKGLMGPPGLEGLPGFGGEKGDRGFTGAPGLPGEPGASSEKG 962

Query: 237  TNGEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRESCS 273
              GE G  G RG  G+ G+N   G+ G P +  Y R+  +
Sbjct: 963  QKGEPGAPGLRGVDGRPGLNGMVGIKGEPGLPGYGRQGAT 1002



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 90/190 (47%), Gaps = 44/190 (23%)

Query: 112 PGLQGPIGQKGEIG------AKGEMGV------------KGERGEKGAPGV------VGP 147
           PGL+G  GQKGE G      A GE G             KGERGE+G PG       +GP
Sbjct: 550 PGLRGAPGQKGEPGLAGIPGADGERGESAIVDLNQIKPEKGERGERGEPGPYGPKGDIGP 609

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGI---------------PGD--EGKRGPKGDMGYP 190
            GP G PG  G  GPKGD G PG  GI               PG+   G+ G KG+ GYP
Sbjct: 610 RGPIGQPGQRGFTGPKGDKGRPGEPGIDGTPGASGRDGTPGKPGESIRGESGAKGNPGYP 669

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G  G  GL GE G+      N    + G  G  G+ G  G  G  G+KG    +G+R
Sbjct: 670 GLKGDKGYAGLKGEAGVCASIPPNLEAAVKGPPGAQGEKGFTGPQGPQGDKGD---KGDR 726

Query: 251 GKSGINGVPG 260
           G +G+ G+PG
Sbjct: 727 GLTGLGGIPG 736



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 107/276 (38%), Gaps = 91/276 (32%)

Query: 101  GFCNSTKEYCP--PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            G      E CP   G +G  G+ G+ G  G  G  GE+G+KG PG+ GP G  G+PG  G
Sbjct: 1181 GLIGEKGEPCPVVKGEKGLPGRPGKNGRDGGPGPVGEKGDKGLPGLAGPQGMPGLPGPLG 1240

Query: 159  KRGPKGDM------------GYPGPQGIPGD----------------------------- 177
            ++G KGD             G PGPQGI G+                             
Sbjct: 1241 RQGEKGDRGDSGIEGRPGKDGLPGPQGIKGERGFIGEKGNAGPPGFPGPQGEKGDRGRDG 1300

Query: 178  ----------EGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDG------ 218
                      +G RGP+G  G PG +GL G     GL G PGLDG+ G  G  G      
Sbjct: 1301 RDGFNGPQGMKGDRGPQGLEGPPGLVGLSGEKGDKGLRGPPGLDGVSGEKGQKGETPVLP 1360

Query: 219  --------------IPGKDGLPG---------------KDGIPGTNGTNGEKGMTGPRGN 249
                            G  GLPG               + G+ G  G  G +G+ G  G 
Sbjct: 1361 PQRKGPPGPPGYDGQKGDKGLPGLQGPPGIPGAPGAPGEVGLRGIEGARGLQGLRGEIGL 1420

Query: 250  RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI 285
             G+ G +G PGTP        +C+  P+  T  LL+
Sbjct: 1421 EGRPGRDGFPGTPGPKGDPGAACTHAPDYLTGILLV 1456



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 78/168 (46%), Gaps = 21/168 (12%)

Query: 112  PGLQGPIGQKGE-----IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            PGL G +G KGE      G +G  G KG+RG  G  G+ G  G +G  G  G  G KGD 
Sbjct: 979  PGLNGMVGIKGEPGLPGYGRQGATGEKGDRGNPGLDGLAGLNGQKGDAGVTGFPGIKGDK 1038

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD--------- 217
            G  G  GIPG  G  G  G  G PG  GL+G  G  GE G  G  G  G           
Sbjct: 1039 GISGLPGIPGSPGMDGAPGPEGAPGLAGLNGEKGSKGEAGRIGERGERGEKGDLGPPGPP 1098

Query: 218  ---GIPGKDGLPGKDGIPGT----NGTNGEKGMTGPRGNRGKSGINGV 258
               G+ G  G+PG+ G P T     G  GE G  GP G  GK G+ G+
Sbjct: 1099 GYMGLKGDRGVPGERGTPATVEAIKGDKGESGFPGPVGLPGKPGLPGL 1146



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 88/193 (45%), Gaps = 45/193 (23%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGE-----RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            L G  G KG+IG  GE   KGE     +GEKG PG  G  G  G PG  G++G KG  G 
Sbjct: 1170 LNGLQGMKGDIGLIGE---KGEPCPVVKGEKGLPGRPGKNGRDGGPGPVGEKGDKGLPGL 1226

Query: 169  PGPQG---IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------------- 209
             GPQG   +PG  G++G KGD G  G  G  G+DGLPG  G+ G                
Sbjct: 1227 AGPQGMPGLPGPLGRQGEKGDRGDSGIEGRPGKDGLPGPQGIKGERGFIGEKGNAGPPGF 1286

Query: 210  -----------------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                               G  GM G  G  GL G  G+ G +G  G+KG+ GP G  G 
Sbjct: 1287 PGPQGEKGDRGRDGRDGFNGPQGMKGDRGPQGLEGPPGLVGLSGEKGDKGLRGPPGLDGV 1346

Query: 253  SGINGVPG-TPAI 264
            SG  G  G TP +
Sbjct: 1347 SGEKGQKGETPVL 1359



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 9/108 (8%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---IPGRNGMDGI 219
           KG+ G+PGP G+      +GPKG  G+ G  GL G  G  GEPG  G   + G  G +G+
Sbjct: 76  KGNRGFPGPPGL------QGPKGMQGFTGAEGLPGSKGSKGEPGPIGPLGVKGDRGREGL 129

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           PG  G+PG +G+PG  G  G  G+ G  G  G  G+ G+ G P    Y
Sbjct: 130 PGYPGVPGTNGLPGVAGAPGIPGVDGCNGTDGLPGLPGLKGEPGPRGY 177



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 68/143 (47%), Gaps = 5/143 (3%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK-----RGPK 163
           Y P G  GP G  G+ G +G  G KG++G  G PG+ G PG  G  G  GK     RG  
Sbjct: 601 YGPKGDIGPRGPIGQPGQRGFTGPKGDKGRPGEPGIDGTPGASGRDGTPGKPGESIRGES 660

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG  G+ GD+G  G KG+ G    I  +    + G PG  G  G  G  G  G  
Sbjct: 661 GAKGNPGYPGLKGDKGYAGLKGEAGVCASIPPNLEAAVKGPPGAQGEKGFTGPQGPQGDK 720

Query: 224 GLPGKDGIPGTNGTNGEKGMTGP 246
           G  G  G+ G  G  G +G+ GP
Sbjct: 721 GDKGDRGLTGLGGIPGPQGLPGP 743



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPG 260
           E G  G PG  G+ G  G  G  G +G+PG+ G+ GE G  GP   +G+RG+ G+ G PG
Sbjct: 75  EKGNRGFPGPPGLQGPKGMQGFTGAEGLPGSKGSKGEPGPIGPLGVKGDRGREGLPGYPG 134

Query: 261 TPA 263
            P 
Sbjct: 135 VPG 137


>gi|332814212|ref|XP_003309255.1| PREDICTED: macrophage receptor MARCO [Pan troglodytes]
          Length = 442

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/170 (46%), Positives = 95/170 (55%), Gaps = 18/170 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +GE+G KG  G++GP G  G         +PG +G RG K
Sbjct: 127 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMK 186

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRN--- 214
           GD   MG PG QG  GD G+ GP G  G+PG  G  G+ GL   PG PG  G PG     
Sbjct: 187 GDSGVMGPPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 246

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G PG+ GLPG  G PG  G  G KG TG +G +G+ G +GVPG   +
Sbjct: 247 GSAGSPGQAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGV 296



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 92/163 (56%), Gaps = 18/163 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD G+ GP       
Sbjct: 157 GLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDSGVMGPPGAQGSKGDSGRPGPPGLAGFP 216

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD 217
             KGD G PG QG+PG  G  G  G  G PG  G  G+ GL   PG PG  G+ G  G  
Sbjct: 217 GAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGQAGLPGSPGSPGATGLKGSKGDT 276

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGING 257
           G+ G+ G  G+ G+PG  G  GE+   G+ GP+G  G++G  G
Sbjct: 277 GLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPGQAGQKG 319



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G  G  G  G +G++G PG+ G PGP G  G  G +G  G  G PG
Sbjct: 194 PPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPG 253

Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G+PG  G       +G KGD G  G+ G  G  G+PG  G+ G  G  G+ G  G  G
Sbjct: 254 QAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPG 313

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G+ G  G  G++GE+G+ G +G RG++ ++
Sbjct: 314 QAGQKGDQGVKGSSGEQGVKGEKGERGENSVS 345



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 74/150 (49%), Gaps = 27/150 (18%)

Query: 143 GVVGPPGPQGIPGD---------EGKRGPKGDMGYPGPQ------------GIPGDEGKR 181
           G  G  GPQG PG          +G++G KGD G  GP+            G+PG +G R
Sbjct: 124 GEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDR 183

Query: 182 GPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G KGD   MG PG  G  G  G PG PGL G PG  G  G PG  G+PG    PG  G  
Sbjct: 184 GMKGDSGVMGPPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGP---PGAVGHP 240

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G KG  G  G+ G++G+ G PG+P     K
Sbjct: 241 GAKGEPGSAGSPGQAGLPGSPGSPGATGLK 270



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 15/124 (12%)

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           + G+ G +GP+G  G  G  G PG +G++G KGD G    IG  G  G  GE G  G+PG
Sbjct: 122 VKGEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGL---IGPKGETGTKGEKGDLGLPG 178

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPGTPA 263
             G  G+ G  G+ G    PG  G+ G+ G  GP         +G++G+ G+ GVPG P 
Sbjct: 179 SKGDRGMKGDSGVMGP---PGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPG 235

Query: 264 ICAY 267
              +
Sbjct: 236 AVGH 239



 Score = 42.7 bits (99), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 56/141 (39%), Gaps = 33/141 (23%)

Query: 164 GDMGYPGPQGIPGDEG------------------KRGPKGDMG---------------YP 190
           G  G  G QG PG +G                  ++G KG  G                 
Sbjct: 64  GMFGIKGEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAAGRDGATGPPGPQGPPGVK 123

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  GL G  G PG+ G  G PG  G  G  G  GL G  G  GT G  G+ G+ G +G+R
Sbjct: 124 GEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDR 183

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  G +GV G P     K +S
Sbjct: 184 GMKGDSGVMGPPGAQGSKGDS 204


>gi|126257022|gb|ABO09864.1| collagen-like protein 2 [Streptococcus pyogenes]
          Length = 473

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/160 (46%), Positives = 94/160 (58%), Gaps = 6/160 (3%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G    T E    G  GP G +G  G KGE G++GE GEKG  G  G  G +G  G  G 
Sbjct: 220 RGDKGETGEKGQRGETGPAGPQGPAGEKGEQGLRGEPGEKGTDGAPGAKGDRGETGPAGP 279

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            GP+GD G  G QG+PG +G+RGP   +G  G+ G DG+DGLPG+   DG  G+NG DG+
Sbjct: 280 VGPRGDKGEKGEQGLPGKDGERGP---VGPAGKDGQDGKDGLPGK---DGKDGQNGKDGL 333

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           PGKDG  G+DG  G  G +G+ G  G  G  GK G +G P
Sbjct: 334 PGKDGKDGQDGKDGLPGKDGKDGQNGKDGLPGKDGQDGKP 373



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 88/183 (48%), Gaps = 18/183 (9%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE------RGEKGAPGVVGPPG 149
           L   +G         P G QGP G KGE G +GE G  G+      RGE G  G VGP G
Sbjct: 114 LKGDRGETGPAGPVGPRGAQGPRGDKGETGERGEQGPAGQDGKAGDRGETGPAGPVGPAG 173

Query: 150 PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------RGPKGDMGYPGRIGLDG 197
           PQG  GD+G+ G +G+ G  G  G  GD G+            +GP+GD G  G  G  G
Sbjct: 174 PQGPRGDKGETGERGEQGPAGQDGKAGDRGETGPVGPVGPAGPQGPRGDKGETGEKGQRG 233

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G  G  G  G+ G PG+ G  G  G  G  G  G  G  GPRG++G+ G  G
Sbjct: 234 ETGPAGPQGPAGEKGEQGLRGEPGEKGTDGAPGAKGDRGETGPAGPVGPRGDKGEKGEQG 293

Query: 258 VPG 260
           +PG
Sbjct: 294 LPG 296



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 97/205 (47%), Gaps = 60/205 (29%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------VGPPGPQGIPGDE 157
           G  GP+G  G  G +G+ G  GERGE+G  G                VGP GPQG  GD+
Sbjct: 164 GPAGPVGPAGPQGPRGDKGETGERGEQGPAGQDGKAGDRGETGPVGPVGPAGPQGPRGDK 223

Query: 158 GKRGPKGDMGYPGP------------------------QGIPGDEGKR---------GPK 184
           G+ G KG  G  GP                         G PG +G R         GP+
Sbjct: 224 GETGEKGQRGETGPAGPQGPAGEKGEQGLRGEPGEKGTDGAPGAKGDRGETGPAGPVGPR 283

Query: 185 GDMGYPGRIGLDGRD---------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           GD G  G  GL G+D         G  G+ G DG+PG++G DG  GKDGLPGKD   G +
Sbjct: 284 GDKGEKGEQGLPGKDGERGPVGPAGKDGQDGKDGLPGKDGKDGQNGKDGLPGKD---GKD 340

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G +G+ G+ G  G  G++G +G+PG
Sbjct: 341 GQDGKDGLPGKDGKDGQNGKDGLPG 365


>gi|306569355|gb|ADN03210.1| HbP1 [Legionella pneumophila]
          Length = 445

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/189 (43%), Positives = 100/189 (52%), Gaps = 36/189 (19%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRG 161
           E  P GL GP G +GE G +G  G KG+RGE G  G+ GP       GPQG+PG +G RG
Sbjct: 73  EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPQGDRG 132

Query: 162 ---------PKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPG 203
                    PKGD G  GPQG+PG +G +         GPKGD G  G  GL G  G  G
Sbjct: 133 EAGPQGLPGPKGDKGEAGPQGLPGPKGDKGEAGPQGLLGPKGDKGEAGPQGLPGPKGDKG 192

Query: 204 EPGLDGIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRG 251
           E G  G+PG  G  G  G  GLP         G  G+PG  G  GE   +G+ GP+G+RG
Sbjct: 193 EAGPQGLPGPKGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDKGEAGPQGLPGPKGDRG 252

Query: 252 KSGINGVPG 260
           ++G  G+PG
Sbjct: 253 EAGPQGLPG 261



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/161 (47%), Positives = 89/161 (55%), Gaps = 10/161 (6%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G KGE G +G  G KG++GE G  G++GP G +G  G +G  GPKGD G
Sbjct: 133 EAGPQGLPGPKGDKGEAGPQGLPGPKGDKGEAGPQGLLGPKGDKGEAGPQGLPGPKGDKG 192

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 193 EAGPQGLPGPKGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDKGEAGPQGLPGPKGDRG 252

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
             G  GLPG  G  G  G  G +GM GP+G  G  G  GVP
Sbjct: 253 EAGPQGLPGPKGDKGETGAVGPQGMPGPKGEAGDDG-QGVP 292



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 99/188 (52%), Gaps = 13/188 (6%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG++GE G  G+ GP G +G  G +G  GPKGD G
Sbjct: 118 EAGPQGLPGPQGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDKGEAGPQGLLGPKGDKG 177

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G +         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 178 EAGPQGLPGPKGDKGEAGPQGLPGPKGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDKG 237

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP-N 277
             G  GLPG     G  G  G +G+ GP+G++G++G  G  G P       +    +P  
Sbjct: 238 EAGPQGLPGPK---GDRGEAGPQGLPGPKGDKGETGAVGPQGMPGPKGEAGDDGQGVPAG 294

Query: 278 SETSQLLI 285
            ET Q+L 
Sbjct: 295 GETGQVLA 302



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/166 (45%), Positives = 90/166 (54%), Gaps = 15/166 (9%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-------- 161
            P G QGP G KGE G KG+ G  G +G  G  G  G  GPQG+PG +G RG        
Sbjct: 51  IPSGPQGPRGDKGEAGPKGDKGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLP 110

Query: 162 -PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMD 217
            PKGD G  GPQG+PG +G RG  G  G PG  G  G     GLPG  G  G  G  G+ 
Sbjct: 111 GPKGDRGEAGPQGLPGPQGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDKGEAGPQGLL 170

Query: 218 GIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 171 GPKGDKGEAGPQGLPGPKGDKGEAGPQGLPGPKGDRGEAGPQGLPG 216


>gi|426353601|ref|XP_004044278.1| PREDICTED: collagen alpha-1(XXI) chain-like [Gorilla gorilla
           gorilla]
          Length = 957

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 90/158 (56%), Gaps = 9/158 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  G +G +G KGE+G  G++G+KGAPG+ G  G  G PG  G  G KG  G PG 
Sbjct: 604 PGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGSKGEPGI 663

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---------PGEPGLDGIPGRNGMDGIPGK 222
           QG+PG  G +G  G MG PG  G  G  G+          GE G+ G  G NG  GIPG+
Sbjct: 664 QGMPGASGLKGETGAMGSPGEPGYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQ 723

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G  G  G  G  GE G+ G  G++G+SG++G+ G
Sbjct: 724 QGIQGHHGAKGERGEKGEPGVRGAIGSKGESGVDGLMG 761



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 87/161 (54%), Gaps = 9/161 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGD 165
           PGL GP G+ G  G  G MG  G +GE G+PG        G PG  G PG+ G  G KG+
Sbjct: 562 PGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGE 621

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G PG QG  G  G  G  G  G PG+ G  G  G  GEPG+ G+PG +G+ G  G  G 
Sbjct: 622 IGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGSKGEPGIQGMPGASGLKGETGAMGS 681

Query: 226 PGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG+    G+PG  G  G+KG  G +G +G+ G NG  G P 
Sbjct: 682 PGEPGYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPG 722



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 96/193 (49%), Gaps = 42/193 (21%)

Query: 110 CPPG---LQGPI------------GQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ 151
           CPPG   LQGP             GQ G+ G  G  G+ G  G  G+PG+ G    PG +
Sbjct: 446 CPPGKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYK 505

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG------RIGLDGRDGLPGEP 205
           G PG +G +G +G  G+PG  G+PG +G+ G KGD G PG        G  G  G PG P
Sbjct: 506 GEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLP 565

Query: 206 GLDGIPGRNGMDGI---------------PGKDGL---PGKDGIPGTNGTNGEKGMTGPR 247
           G  G PGR+G DG+               PG+DG    PG  G PG  G  G+KG  GP 
Sbjct: 566 GPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPP 625

Query: 248 GNRGKSGINGVPG 260
           G +GK G  G+PG
Sbjct: 626 GQQGKKGAPGMPG 638



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           PGL G  G KGE+GAKG+ G  G         E+G  G PG+   PGP G PG  GK G 
Sbjct: 523 PGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGL---PGPAGEPGRHGKDGL 579

Query: 163 KGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G  G+ G     G PG +G RG  G  G+PG  GL G+ G  G PG  G  G  GM G+
Sbjct: 580 MGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGL 639

Query: 220 PGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPA 263
            G +G PG+ G PG+ G+ GE   +GM G  G +G++G  G PG P 
Sbjct: 640 MGSNGSPGQPGTPGSKGSKGEPGIQGMPGASGLKGETGAMGSPGEPG 686



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 102/220 (46%), Gaps = 42/220 (19%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   +      PG+QG    +G  G KGE G  G++G++G PG    PG  G+PG +G+
Sbjct: 481 QGIAGTPGVPGSPGIQG---ARGLPGYKGEPGRDGDKGDRGLPGF---PGLHGMPGSKGE 534

Query: 160 RGPKGDMGYPGP---------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            G KGD G PG                 G+PG  G+ G  G  G  G  G  G  G PG 
Sbjct: 535 MGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGA 594

Query: 205 PGLDGIPGRNGMDGIP------------------GKDGLPGKDGIPGTNGTNGEKGMTGP 246
           PG DG  G  G+ G P                  GK G PG  G+ G+NG+ G+ G  G 
Sbjct: 595 PGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGS 654

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           +G++G+ GI G+PG   +   K E+ ++    E   + +P
Sbjct: 655 KGSKGEPGIQGMPGASGL---KGETGAMGSPGEPGYMGLP 691



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 79/173 (45%), Gaps = 33/173 (19%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G +G KG PG+ G PG  G PG +GK G +G  G PG  G PG +G RG  G  G P
Sbjct: 449 GKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYKGEP 508

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRN---------------------------GMDGIPGKD 223
           GR G  G  GLPG PGL G+PG                             G  G+PG  
Sbjct: 509 GRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPA 568

Query: 224 GLP---GKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G P   GKDG+   PG  G  G  G  G  G RG+ GI G PG   +   K E
Sbjct: 569 GEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGE 621



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 41/96 (42%), Gaps = 34/96 (35%)

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR------------- 247
           LPG PG DG+P   G+ G+PG+ G+ G  G+PG NG  G +G   P              
Sbjct: 844 LPGLPGRDGVP---GLVGVPGRPGVRGLKGLPGRNGEKGSQGFGHPGEQGPPGPPGPEGP 900

Query: 248 ------------------GNRGKSGINGVPGTPAIC 265
                             G+ GK GI G PG P IC
Sbjct: 901 PGISKEGPPGDPGLPGKDGDHGKPGIQGQPGPPGIC 936


>gi|126310355|ref|XP_001373089.1| PREDICTED: collagen alpha-1(IX) chain-like [Monodelphis domestica]
          Length = 1052

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/176 (46%), Positives = 99/176 (56%), Gaps = 27/176 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KGEIG  G  G KGE G++G  G VG   PPGPQG+ G  G  G KGD G 
Sbjct: 557 PGLRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGITGIVGAKGDKGA 616

Query: 169 ------PGPQGI---PGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGM 216
                 PGPQG+   PGD+G+RGP G+ G  G  G  G    +GLPG  G +G+PG +G 
Sbjct: 617 RGLDGEPGPQGLPGAPGDQGQRGPLGETGPKGDRGAQGPRGINGLPGPKGENGLPGVDGR 676

Query: 217 DGIPGKDGLP------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           DGIPG  G              G+ G+PG  GT G KG+ G +GN G  G+ G+ G
Sbjct: 677 DGIPGMPGSKGEPGKPGPPGDIGRQGLPGLPGTPGAKGVAGEKGNSGAPGVPGLMG 732



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 94/180 (52%), Gaps = 24/180 (13%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG         PPG QG  G  G +GAKG+ G +G  GE G  G+ G PG QG  G  G+
Sbjct: 584 QGELGEVGAQGPPGPQGLRGITGIVGAKGDKGARGLDGEPGPQGLPGAPGDQGQRGPLGE 643

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP-------------- 205
            GPKGD G  GP+GI    G  GPKG+ G P   G+DGRDG+PG P              
Sbjct: 644 TGPKGDRGAQGPRGI---NGLPGPKGENGLP---GVDGRDGIPGMPGSKGEPGKPGPPGD 697

Query: 206 ----GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
               GL G+PG  G  G+ G+ G  G  G+PG  G +G+ G  GP+G  G  G  G+PG+
Sbjct: 698 IGRQGLPGLPGTPGAKGVAGEKGNSGAPGVPGLMGNSGKPGQQGPQGEVGPRGPRGLPGS 757



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 77/150 (51%), Gaps = 15/150 (10%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKG 164
           E  P GL G  G +G+ G  GE G KG+RG +G  G+ G PGP+   G+PG +G+     
Sbjct: 622 EPGPQGLPGAPGDQGQRGPLGETGPKGDRGAQGPRGINGLPGPKGENGLPGVDGR----- 676

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                   GIPG  G +G  G  G PG IG  G  GLPG PG  G+ G  G  G PG  G
Sbjct: 677 -------DGIPGMPGSKGEPGKPGPPGDIGRQGLPGLPGTPGAKGVAGEKGNSGAPGVPG 729

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           L G  G PG  G  GE G  GPRG  G  G
Sbjct: 730 LMGNSGKPGQQGPQGEVGPRGPRGLPGSRG 759



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 82/177 (46%), Gaps = 39/177 (22%)

Query: 112 PGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEG---------- 158
           PG +G  G+KG  GA G    MG  G+ G++G  G VGP GP+G+PG  G          
Sbjct: 710 PGAKGVAGEKGNSGAPGVPGLMGNSGKPGQQGPQGEVGPRGPRGLPGSRGELGPSGPPGS 769

Query: 159 --KRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGR------------------IGL 195
             K GP G  G PG   P G+PG +G RG  G+ G  G                   IGL
Sbjct: 770 PGKLGPLGSPGLPGLPGPAGLPGLKGDRGSVGESGPKGEQGRVGEEGEAGGKGELGDIGL 829

Query: 196 DGRDGL---PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G  G    PGEPGL G  G  G+ G+ G  G PG  G+ G  G  G  G+ GP G 
Sbjct: 830 PGPKGSVGNPGEPGLRGPEGSRGLPGVEGSRGPPGPRGMQGERGATGLPGIQGPAGR 886



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 83/182 (45%), Gaps = 39/182 (21%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           IG++G  G  G  G KG  GEKG  G  G PG  G  G  G++GP+G++G  GP+G+PG 
Sbjct: 698 IGRQGLPGLPGTPGAKGVAGEKGNSGAPGVPGLMGNSGKPGQQGPQGEVGPRGPRGLPGS 757

Query: 178 EG------------KRGPKGDMGYPGRIGLDGRDGLPGEPGL------------------ 207
            G            K GP G  G PG  G  G  GL G+ G                   
Sbjct: 758 RGELGPSGPPGSPGKLGPLGSPGLPGLPGPAGLPGLKGDRGSVGESGPKGEQGRVGEEGE 817

Query: 208 ---------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                     G+PG  G  G PG+ GL G +G  G  G  G +G  GPRG +G+ G  G+
Sbjct: 818 AGGKGELGDIGLPGPKGSVGNPGEPGLRGPEGSRGLPGVEGSRGPPGPRGMQGERGATGL 877

Query: 259 PG 260
           PG
Sbjct: 878 PG 879



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 48/106 (45%), Gaps = 27/106 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEM---------------------GVKGERGEKGAPGVVGPPGP 150
           PGL+G  G  GE G KGE                      G KG  G  G PG+ GP G 
Sbjct: 791 PGLKGDRGSVGESGPKGEQGRVGEEGEAGGKGELGDIGLPGPKGSVGNPGEPGLRGPEGS 850

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           +G+PG EG RGP      PGP+G+ G+ G  G  G  G  GR   D
Sbjct: 851 RGLPGVEGSRGP------PGPRGMQGERGATGLPGIQGPAGRAPTD 890



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 12/74 (16%)

Query: 129  EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
            +MG +G  G KG PG +G  GP+G  G+ G+RGP  +G  G PG  G+PGD G       
Sbjct: 943  QMGPRGLPGLKGPPGELGLRGPKGDLGERGERGPPGRGPKGLPGSIGLPGDPG------- 995

Query: 187  MGYPGRIGLDGRDG 200
               P   G +GRDG
Sbjct: 996  ---PASYGKEGRDG 1006


>gi|344289982|ref|XP_003416719.1| PREDICTED: LOW QUALITY PROTEIN: macrophage receptor MARCO-like
           [Loxodonta africana]
          Length = 532

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/169 (45%), Positives = 92/169 (54%), Gaps = 24/169 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------PK 163
           GLQGP+G+ G+ GA G  G +GE+G KG  G++GP G  G  GD G+RG          K
Sbjct: 218 GLQGPMGEPGKPGATGTPGPQGEKGSKGDTGLIGPKGESGAKGDRGERGLPGGKGDMGVK 277

Query: 164 GDMGYPGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           GDMG  GP G PG +G              G KG+ G+PG  GL G  G+ G PG  G P
Sbjct: 278 GDMGIMGPPGAPGSKGVSGIPGAPGAAGFPGIKGNQGHPGVQGLPGPPGVVGSPGPKGDP 337

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           GR G    PG  GLPG  G PG  G  G KG TG +G +G  G +GVPG
Sbjct: 338 GRAGS---PGLTGLPGAPGSPGAAGLKGSKGDTGLQGQKGTKGESGVPG 383



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 103/209 (49%), Gaps = 27/209 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAP------------GVVGPPGP------ 150
           PG QG  G KG+   IG KGE G KG+RGE+G P            G++GPPG       
Sbjct: 235 PGPQGEKGSKGDTGLIGPKGESGAKGDRGERGLPGGKGDMGVKGDMGIMGPPGAPGSKGV 294

Query: 151 ---QGIPGDEGKRGPKGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGE 204
               G PG  G  G KG+ G+PG QG+PG     G  GPKGD G  G  GL G  G PG 
Sbjct: 295 SGIPGAPGAAGFPGIKGNQGHPGVQGLPGPPGVVGSPGPKGDPGRAGSPGLTGLPGAPGS 354

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PG  G+ G  G  G+ G+ G  G+ G+PG  G  GEKG  G  G +G  G+ G  G P +
Sbjct: 355 PGAAGLKGSKGDTGLQGQKGTKGESGVPGFTGMKGEKGSPGLAGPKGAPGLVGQKGEPGV 414

Query: 265 CAYKRESCSLLPNSETSQLLIPPTIVGSE 293
                +  +     +  + L+   I+GS 
Sbjct: 415 KGSSGQQGTKGEKGQKGESLLTVRIIGSR 443



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 80/149 (53%), Gaps = 6/149 (4%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKG 164
           PPG  G  G  G  GA G  G  G +G +G PGV G PGP G+       GD G+ G  G
Sbjct: 285 PPGAPGSKGVSGIPGAPGAAGFPGIKGNQGHPGVQGLPGPPGVVGSPGPKGDPGRAGSPG 344

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G PG  G PG  G +G KGD G  G+ G  G  G+PG  G+ G  G  G+ G  G  G
Sbjct: 345 LTGLPGAPGSPGAAGLKGSKGDTGLQGQKGTKGESGVPGFTGMKGEKGSPGLAGPKGAPG 404

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           L G+ G PG  G++G++G  G +G +G+S
Sbjct: 405 LVGQKGEPGVKGSSGQQGTKGEKGQKGES 433



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 77/163 (47%), Gaps = 36/163 (22%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGE G++G  GE G PG  G PGPQG      ++G KGD G  GP+G      + G KGD
Sbjct: 214 KGEAGLQGPMGEPGKPGATGTPGPQG------EKGSKGDTGLIGPKG------ESGAKGD 261

Query: 187 ---------------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                                MG PG  G  G  G+PG PG  G PG  G  G PG  GL
Sbjct: 262 RGERGLPGGKGDMGVKGDMGIMGPPGAPGSKGVSGIPGAPGAAGFPGIKGNQGHPGVQGL 321

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           PG    PG  G+ G KG  G  G+ G +G+ G PG+P     K
Sbjct: 322 PGP---PGVVGSPGPKGDPGRAGSPGLTGLPGAPGSPGAAGLK 361



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 67/139 (48%), Gaps = 21/139 (15%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G KG  G  GA G  G  GP GI G+ G +GP G+ G PG  G PG +G++G KGD G
Sbjct: 189 EKGAKGATGRDGATGPPGLQGPPGIKGEAGLQGPMGEPGKPGATGTPGPQGEKGSKGDTG 248

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
               IG  G  G  G+ G  G+PG  G  G+                   G+ G+ GP G
Sbjct: 249 L---IGPKGESGAKGDRGERGLPGGKGDMGV------------------KGDMGIMGPPG 287

Query: 249 NRGKSGINGVPGTPAICAY 267
             G  G++G+PG P    +
Sbjct: 288 APGSKGVSGIPGAPGAAGF 306



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 82/164 (50%), Gaps = 12/164 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---- 168
           G+ G  GQKG +G  G  G+ G   EKGA G  G  G  G PG +G  G KG+ G     
Sbjct: 164 GIPGLPGQKGTLGVPGTPGLPGPPAEKGAKGATGRDGATGPPGLQGPPGIKGEAGLQGPM 223

Query: 169 -----PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIP 220
                PG  G PG +G++G KGD G  G  G  G  G  GE GL G  G  G+    GI 
Sbjct: 224 GEPGKPGATGTPGPQGEKGSKGDTGLIGPKGESGAKGDRGERGLPGGKGDMGVKGDMGIM 283

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G PG  G+ G  G  G  G  G +GN+G  G+ G+PG P +
Sbjct: 284 GPPGAPGSKGVSGIPGAPGAAGFPGIKGNQGHPGVQGLPGPPGV 327



 Score = 39.7 bits (91), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 34/65 (52%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
             +QG   +  E   PG  G  G+KG  G  G  G  G  G+KG PGV G  G QG  G+
Sbjct: 367 TGLQGQKGTKGESGVPGFTGMKGEKGSPGLAGPKGAPGLVGQKGEPGVKGSSGQQGTKGE 426

Query: 157 EGKRG 161
           +G++G
Sbjct: 427 KGQKG 431


>gi|431891153|gb|ELK02030.1| Brain-specific angiogenesis inhibitor 2 [Pteropus alecto]
          Length = 2748

 Score =  101 bits (251), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 77/209 (36%), Positives = 92/209 (44%), Gaps = 60/209 (28%)

Query: 112  PGLQGPIGQKGEIGAKGE---------MGVKGERGEK---------------------GA 141
            PGL G +G  G  G KGE          G+KGE+GE                      G 
Sbjct: 2038 PGLPGKVGDPGPTGLKGEKGPPGPVGPAGIKGEKGESCEPCPALSKPQDGDSHVVALPGP 2097

Query: 142  PGVVGPPGPQG--IPGDEGK------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            PG  G PGP G  +PG +GK      +G KGD G PG  GIPG  G+ G  G+ G  G +
Sbjct: 2098 PGEKGEPGPPGFSLPGKQGKAGERGLKGQKGDAGNPGDPGIPGTSGQPGLSGEPGVRGPV 2157

Query: 194  GLDGRD------------------GLPGEPGLDGIPGRNGMD--GIPGKDGLPGKDGIPG 233
            G  G                    GLPG+PG  G PG  G+   G PG+ G PG  G PG
Sbjct: 2158 GPKGEKGDGCTACPSLQGTLTDMAGLPGKPGPKGDPGPEGVGRPGKPGQPGFPGVQGPPG 2217

Query: 234  TNGTNGEKGMTGPR--GNRGKSGINGVPG 260
              G  GE G  G R  G +G+ G  G+PG
Sbjct: 2218 LKGVQGEPGPPGMRVQGPQGEPGAQGLPG 2246



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 96/234 (41%), Gaps = 64/234 (27%)

Query: 96   LVAMQGFCNSTKEYCPPG--LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            +VA+ G      E  PPG  L G  G+ GE G KG+ G  G  G+ G PG  G PG  G 
Sbjct: 2091 VVALPGPPGEKGEPGPPGFSLPGKQGKAGERGLKGQKGDAGNPGDPGIPGTSGQPGLSGE 2150

Query: 154  PGDEGKRGPKGDMG-----YPGPQG----IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            PG  G  GPKG+ G      P  QG    + G  GK GPKGD G P  +G  G+ G PG 
Sbjct: 2151 PGVRGPVGPKGEKGDGCTACPSLQGTLTDMAGLPGKPGPKGDPG-PEGVGRPGKPGQPGF 2209

Query: 205  PGLDGIPGRNGMDGIPGKDGL--------PGKDGIPG----------------------- 233
            PG+ G PG  G+ G PG  G+        PG  G+PG                       
Sbjct: 2210 PGVQGPPGLKGVQGEPGPPGMRVQGPQGEPGAQGLPGIQGLPGPRGPPGPAGAKGTKGSP 2269

Query: 234  ---------------------TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                                  +G  G+ G+ G RG  G+ G  G  G P  C+
Sbjct: 2270 GVKGAIGPVGPPGASVSGPPGADGRQGQTGLPGARGMPGEKGSQGEKGEPGECS 2323



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 68/172 (39%), Positives = 79/172 (45%), Gaps = 39/172 (22%)

Query: 111  PPGLQG------------PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            PPG QG            P GQKG+ G KG  G+ G  G+ G+ G VG PGP G  G  G
Sbjct: 2530 PPGKQGLYGPPGPKGDPGPSGQKGQAGEKGRAGMPGGPGKSGSMGPVGAPGPAGERGHPG 2589

Query: 159  KRGPKGDMGYPGPQGIPGD-----EGKRGPKGD--------MGY--------------PG 191
              GP G  G PG  G  GD     E KR  + +        M Y              PG
Sbjct: 2590 SPGPVGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERMAYYTSRIQFPVEVAAAPG 2649

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            R G  G+DG PG PG  G PG  G  G  G+ GLPG  G+PGT G  G+ G+
Sbjct: 2650 RPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGMRGLPGTKGEKGDIGI 2701



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 67/232 (28%), Positives = 82/232 (35%), Gaps = 80/232 (34%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK-----------------------------GAP 142
            PG +G  G+ G  G+ G  G +GE G                               G P
Sbjct: 2460 PGPKGDCGKPGPPGSSGRPGAEGEPGAMGPQGRPGPPGHVGPQGPPGQPGPAGISAVGEP 2519

Query: 143  GVVGPPGPQGIPGDEG------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G  G  G +G PG +G              G KG  G  G  G+PG  GK G  G +G P
Sbjct: 2520 GADGAAGKEGPPGKQGLYGPPGPKGDPGPSGQKGQAGEKGRAGMPGGPGKSGSMGPVGAP 2579

Query: 191  GRIGLDGRDGLP---GEPGLDGIPGRNG-------------------------------- 215
            G  G  G  G P   G PGL G+PG  G                                
Sbjct: 2580 GPAGERGHPGSPGPVGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERMAYYTSRIQ 2639

Query: 216  ----MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                +   PG+ G PGKDG PG  G  G  G+ G  G  G+ G+ G+ G P 
Sbjct: 2640 FPVEVAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGMRGLPG 2691



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 71/242 (29%), Positives = 83/242 (34%), Gaps = 86/242 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA------------------------------ 141
            PGL GP G  G+ G  G  G  G  GE GA                              
Sbjct: 2457 PGLPGPKGDCGKPGPPGSSGRPGAEGEPGAMGPQGRPGPPGHVGPQGPPGQPGPAGISAV 2516

Query: 142  --PGVVGPPGPQGIPGDEG------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
              PG  G  G +G PG +G              G KG  G  G  G+PG  GK G  G +
Sbjct: 2517 GEPGADGAAGKEGPPGKQGLYGPPGPKGDPGPSGQKGQAGEKGRAGMPGGPGKSGSMGPV 2576

Query: 188  GYPGRIGLDGRDGLPG---EPGLDGIPGRNG----------------------------- 215
            G PG  G  G  G PG    PGL G+PG  G                             
Sbjct: 2577 GAPGPAGERGHPGSPGPVGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERMAYYTS 2636

Query: 216  -------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                   +   PG+ G PGKDG PG  G  G  G+ G  G  G+    G+PG   +   K
Sbjct: 2637 RIQFPVEVAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGR---QGLPGMRGLPGTK 2693

Query: 269  RE 270
             E
Sbjct: 2694 GE 2695



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 74/257 (28%), Positives = 89/257 (34%), Gaps = 108/257 (42%)

Query: 111  PPGL--QGPIGQKGEIGAKG---------------EMGVKGERGEKGAPGVVGPPGPQGI 153
            PPG+  QGP G+ G  G  G                 G KG  G KGA G VGPPG   +
Sbjct: 2227 PPGMRVQGPQGEPGAQGLPGIQGLPGPRGPPGPAGAKGTKGSPGVKGAIGPVGPPGAS-V 2285

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR-----DGLPGEPGL- 207
             G  G  G +G  G PG +G+PG++G +G KG+   PG      R      G+PG PGL 
Sbjct: 2286 SGPPGADGRQGQTGLPGARGMPGEKGSQGEKGE---PGECSCPSRGDPVFSGMPGAPGLW 2342

Query: 208  ------------------------------DGIPGRNGMDGIPGK--------------- 222
                                           G PG+ G  G PG                
Sbjct: 2343 MGSSWQPGPQGPPGIPGPPGPPGMPGLQGPPGFPGKEGAPGPPGPQAEKGSEGIRGPSGM 2402

Query: 223  ------------------DGLPGKDGIPGT------------------NGTNGEKGMTGP 246
                              DGL GKDG PG                    G  G  G+ GP
Sbjct: 2403 PGPPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGP 2462

Query: 247  RGNRGKSGINGVPGTPA 263
            +G+ GK G  G  G P 
Sbjct: 2463 KGDCGKPGPPGSSGRPG 2479



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 72/271 (26%), Positives = 94/271 (34%), Gaps = 121/271 (44%)

Query: 111  PPGLQGPIGQ-----------KGEIGAKGEMGV---------------KGERGEKGAPGV 144
            PPGL+G  G+           +GE GA+G  G+               KG +G  G  G 
Sbjct: 2215 PPGLKGVQGEPGPPGMRVQGPQGEPGAQGLPGIQGLPGPRGPPGPAGAKGTKGSPGVKGA 2274

Query: 145  VGPPGPQG--IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD--------------MG 188
            +GP GP G  + G  G  G +G  G PG +G+PG++G +G KG+               G
Sbjct: 2275 IGPVGPPGASVSGPPGADGRQGQTGLPGARGMPGEKGSQGEKGEPGECSCPSRGDPVFSG 2334

Query: 189  YPGRIGL----------------------------------DGRDGLPGEPGLDGIPGRN 214
             PG  GL                                   G++G PG PG     G  
Sbjct: 2335 MPGAPGLWMGSSWQPGPQGPPGIPGPPGPPGMPGLQGPPGFPGKEGAPGPPGPQAEKGSE 2394

Query: 215  G------------------------MDGIPGKDGLP---------------------GKD 229
            G                        +DG+ GKDG P                     GK 
Sbjct: 2395 GIRGPSGMPGPPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKT 2454

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG  G  G+ G  GP G+ G+ G  G PG
Sbjct: 2455 GHPGLPGPKGDCGKPGPPGSSGRPGAEGEPG 2485



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 60/155 (38%), Positives = 77/155 (49%), Gaps = 25/155 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+QGP G K   G +GE G  G R +    G  G PG QG+PG +G  GP+G  G  G 
Sbjct: 2210 PGVQGPPGLK---GVQGEPGPPGMRVQ----GPQGEPGAQGLPGIQGLPGPRGPPGPAGA 2262

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            +G  G  G +G  G +G PG         + G PG DG  G+ G         LPG  G+
Sbjct: 2263 KGTKGSPGVKGAIGPVGPPGA-------SVSGPPGADGRQGQTG---------LPGARGM 2306

Query: 232  PGTNGTNGEKGMTGPRG--NRGKSGINGVPGTPAI 264
            PG  G+ GEKG  G     +RG    +G+PG P +
Sbjct: 2307 PGEKGSQGEKGEPGECSCPSRGDPVFSGMPGAPGL 2341



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/102 (45%), Positives = 54/102 (52%), Gaps = 17/102 (16%)

Query: 113  GLQGPIGQKGEIGAKGE--------------MGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            GL GP G KGE GA+G+               G KGE+GE GA G  G PG  G  G +G
Sbjct: 1792 GLPGPSGPKGEKGAQGKDCVQISPDAPLQCAEGPKGEKGESGALGPSGLPGSTGQKGQKG 1851

Query: 159  KRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            +RG    KG MG PG  G PG+    GPKG  G PG +G +G
Sbjct: 1852 ERGDGGIKGSMGKPGRDGRPGEICIIGPKGQKGDPGFVGPEG 1893



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 68/172 (39%), Gaps = 20/172 (11%)

Query: 106  TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGP 162
            T+ +C   L+ P   K +    G +  K E+G K          PP   G        GP
Sbjct: 1725 TRCFC---LEEPQNSKVDAQLTGRINQKTEKGTKAHQETASDECPPCVHGARESNVTIGP 1781

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMG--------------YPGRIGLDGRDGLPGEPGLD 208
             G  G  G QG+PG  G +G KG  G                G  G  G  G  G  GL 
Sbjct: 1782 SGLKGGKGEQGLPGPSGPKGEKGAQGKDCVQISPDAPLQCAEGPKGEKGESGALGPSGLP 1841

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G  G  G+ G  G PG +G  GE  + GP+G +G  G  G  G
Sbjct: 1842 GSTGQKGQKGERGDGGIKGSMGKPGRDGRPGEICIIGPKGQKGDPGFVGPEG 1893



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 53/158 (33%), Positives = 60/158 (37%), Gaps = 50/158 (31%)

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM----------------------- 187
            +G  G  G  GPKGD G PGP G  G  G  G  G M                       
Sbjct: 2451 KGKTGHPGLPGPKGDCGKPGPPGSSGRPGAEGEPGAMGPQGRPGPPGHVGPQGPPGQPGP 2510

Query: 188  ------GYPGRIGLDGRDGLPGEPGL------------------DGIPGRNGMDGIPGKD 223
                  G PG  G  G++G PG+ GL                   G  GR GM G PGK 
Sbjct: 2511 AGISAVGEPGADGAAGKEGPPGKQGLYGPPGPKGDPGPSGQKGQAGEKGRAGMPGGPGKS 2570

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G PG  G  G  G  GP G+    G+ GVPG+
Sbjct: 2571 GSMGPVGAPGPAGERGHPGSPGPVGS---PGLPGVPGS 2605



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 54/163 (33%), Positives = 67/163 (41%), Gaps = 44/163 (26%)

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK----------- 184
            +G+ G PG+   PGP+G   D GK GP G  G PG +G PG  G +G             
Sbjct: 2451 KGKTGHPGL---PGPKG---DCGKPGPPGSSGRPGAEGEPGAMGPQGRPGPPGHVGPQGP 2504

Query: 185  ---------GDMGYPGRIGLDGRDGLPGEPGL---------------DGIPGRNGMDGIP 220
                       +G PG  G  G++G PG+ GL                G  G  G  G+P
Sbjct: 2505 PGQPGPAGISAVGEPGADGAAGKEGPPGKQGLYGPPGPKGDPGPSGQKGQAGEKGRAGMP 2564

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G    PGK G  G  G  G  G  G  G+ G  G  G+PG P 
Sbjct: 2565 GG---PGKSGSMGPVGAPGPAGERGHPGSPGPVGSPGLPGVPG 2604



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 73/221 (33%), Positives = 90/221 (40%), Gaps = 73/221 (33%)

Query: 115  QGPIGQKGEIGA------KGEMGVKGERGEKGAPGV---VGPPGPQGIPGD---EGKRGP 162
            +GP G+KGE GA       G  G KG++GE+G  G+   +G PG  G PG+    G +G 
Sbjct: 1823 EGPKGEKGESGALGPSGLPGSTGQKGQKGERGDGGIKGSMGKPGRDGRPGEICIIGPKGQ 1882

Query: 163  KGDMGYPGPQGI------------------------------------PGDEGKRGPKGD 186
            KGD G+ GP+G+                                     G  GK GP G 
Sbjct: 1883 KGDPGFVGPEGLAGEPGPPGQPGPPGIGLPGTPGDPGGPPGPKGNKGSSGTPGKEGPGGK 1942

Query: 187  MGYPGRIGLDGRDGLPGE--PGL-DGIPGRNGMDGIPGKDGLPGKD----GIPGTNGTNG 239
             G PG  GL G  G P E  P L +G     G+ G PG  G PG      G PG  G  G
Sbjct: 1943 PGKPGVPGLKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGNPAPARGDPGIQGLKG 2002

Query: 240  EKG-----------------MTGPRGNRGKSGINGVPGTPA 263
            EKG                  TG +G+ G  G  G+PG P 
Sbjct: 2003 EKGESCLSCSSAVAAQHLGPFTGAKGDVGPPGF-GLPGLPG 2042



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 66/187 (35%), Gaps = 64/187 (34%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG----------------- 155
            G+ G  G+ G +G  G  G  GERG  G+PG VG PG  G+PG                 
Sbjct: 2562 GMPGGPGKSGSMGPVGAPGPAGERGHPGSPGPVGSPGLPGVPGSMGDMVNYDEIKRFIRQ 2621

Query: 156  ------DE-------------------------GKRGPKGDMGYPGPQGIPGDEGKRGPK 184
                  DE                         GK G  G  G PG  G+          
Sbjct: 2622 EIIKMFDERMAYYTSRIQFPVEVAAAPGRPGPPGKDGAPGRPGAPGSPGL---------- 2671

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-GKDGLPGKDGIPGTNGTNGEKGM 243
                 PG+IG +GR GLPG  GL G  G  G  GI    D        P      G+ G 
Sbjct: 2672 -----PGQIGREGRQGLPGMRGLPGTKGEKGDIGIGIAGDNGLPGPPGPQGPPGYGKMGA 2726

Query: 244  TGPRGNR 250
            TGP G +
Sbjct: 2727 TGPMGQQ 2733



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 63/213 (29%), Positives = 69/213 (32%), Gaps = 95/213 (44%)

Query: 137  GEKGAPGVVGPPGPQGIPGDEGKR------------------------GPKGDMGYPGP- 171
            G++GAPG   PPGPQ   G EG R                        G  G  G PG  
Sbjct: 2377 GKEGAPG---PPGPQAEKGSEGIRGPSGMPGPPGPPGPPGIQGPAGLDGLDGKDGKPGLR 2433

Query: 172  -----------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP--- 211
                             +G  G  G  GPKGD G PG  G  GR      PG +G P   
Sbjct: 2434 GDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSSGR------PGAEGEPGAM 2487

Query: 212  -----------------------------GRNGMDGIPGKDGLPGKDGI----------- 231
                                         G  G DG  GK+G PGK G+           
Sbjct: 2488 GPQGRPGPPGHVGPQGPPGQPGPAGISAVGEPGADGAAGKEGPPGKQGLYGPPGPKGDPG 2547

Query: 232  -PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G  G  GEKG  G  G  GKSG  G  G P 
Sbjct: 2548 PSGQKGQAGEKGRAGMPGGPGKSGSMGPVGAPG 2580


>gi|410951049|ref|XP_003982214.1| PREDICTED: collagen alpha-1(VII) chain [Felis catus]
          Length = 2938

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 92/162 (56%), Gaps = 7/162 (4%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG-APGVVGPPGPQGIPGD 156
             ++G      +  P GL GP G +GE G KG+ G  G +G+KG A   VGPPGP+G  GD
Sbjct: 2473 GVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDTGTTGLKGDKGDAAMAVGPPGPRGAKGD 2532

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G+RGP+G  G  GP+G  G+ G++G KG+ G  G  GL G        GL G  G  G 
Sbjct: 2533 MGERGPRGIDGDKGPRGDTGNPGEKGTKGEPGDKGSTGLLGAR------GLTGPKGEPGA 2586

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             GIPG  G PGKDG PG  G  G+ G  GPRG +G+ GI G 
Sbjct: 2587 AGIPGDPGSPGKDGTPGIRGDKGDIGFMGPRGLKGERGIKGA 2628



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/188 (40%), Positives = 98/188 (52%), Gaps = 33/188 (17%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGP 150
            +G      E  P G+ G  G +G+ G  GE G KGE G+KG+ G++G          PG 
Sbjct: 2527 RGAKGDMGERGPRGIDGDKGPRGDTGNPGEKGTKGEPGDKGSTGLLGARGLTGPKGEPGA 2586

Query: 151  QGIPGDEGK---------RGPKGDMGYPGPQGIPGD---------EGKRGPKGDMGYPGR 192
             GIPGD G          RG KGD+G+ GP+G+ G+         +G++G KG+ G PGR
Sbjct: 2587 AGIPGDPGSPGKDGTPGIRGDKGDIGFMGPRGLKGERGIKGACGLDGEKGDKGEAGPPGR 2646

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             GL GR G  GEPG+ G  G  G +G+ G  G  G DG PG+ G  GEK      G RG 
Sbjct: 2647 PGLAGRKGDVGEPGMPGQSGTPGKEGLIGPKGDRGFDGQPGSKGDQGEK------GERGS 2700

Query: 253  SGINGVPG 260
             GI G PG
Sbjct: 2701 PGIGGFPG 2708



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 97/182 (53%), Gaps = 24/182 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDM 166
            G  GP G KG++G +G  G+ G++G +G  G  G  G +G PGD+G       RG  G  
Sbjct: 2522 GPPGPRGAKGDMGERGPRGIDGDKGPRGDTGNPGEKGTKGEPGDKGSTGLLGARGLTGPK 2581

Query: 167  GYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G PG  GIPGD G          RG KGD+G+ G  GL G  G+ G  GLDG  G  G  
Sbjct: 2582 GEPGAAGIPGDPGSPGKDGTPGIRGDKGDIGFMGPRGLKGERGIKGACGLDGEKGDKGEA 2641

Query: 218  GIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G PG+ GL G+       G+PG +GT G++G+ GP+G+R   G +G PG+      K E 
Sbjct: 2642 GPPGRPGLAGRKGDVGEPGMPGQSGTPGKEGLIGPKGDR---GFDGQPGSKGDQGEKGER 2698

Query: 272  CS 273
             S
Sbjct: 2699 GS 2700



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 107/236 (45%), Gaps = 25/236 (10%)

Query: 25   PIISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNP 84
            P  +K ++  R  R +D DKG   D   P     +  P D            + ST    
Sbjct: 2526 PRGAKGDMGERGPRGIDGDKGPRGDTGNPGEKGTKGEPGD------------KGSTGLLG 2573

Query: 85   WVWLNAYSRIPLVA-MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG 143
               L      P  A + G   S  +   PG++G    KG+IG  G  G+KGERG KGA G
Sbjct: 2574 ARGLTGPKGEPGAAGIPGDPGSPGKDGTPGIRG---DKGDIGFMGPRGLKGERGIKGACG 2630

Query: 144  V------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIG 194
            +       G  GP G PG  G++G  G+ G PG  G PG EG  GPKGD G+   PG  G
Sbjct: 2631 LDGEKGDKGEAGPPGRPGLAGRKGDVGEPGMPGQSGTPGKEGLIGPKGDRGFDGQPGSKG 2690

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
              G  G  G PG+ G PG  G DG  G  G PG  G  G  G  G+KG  GP G R
Sbjct: 2691 DQGEKGERGSPGIGGFPGPRGNDGSSGPPGPPGSVGPKGPEGLQGQKGERGPPGER 2746



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 85/193 (44%), Gaps = 52/193 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++GAP         G VGP   PGP G PG    
Sbjct: 2239 PGLPGQVGETGKPGAPGRDGASGKDGDRGAPGVPGSPGLPGPVGPKGEPGPMGAPGQAVV 2298

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG  G+ GD  G+ G KGD G PG  G  G  G  GEP   G PG +G 
Sbjct: 2299 GPPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP---GDPGEDGQ 2353

Query: 217  DGIPGKDGLPGKDGI--------------------------------PGTNGTNGEKGMT 244
             G PG  G  G  GI                                PG  G  GE G  
Sbjct: 2354 KGAPGLKGNKGDPGIGVQGPLGPAGPPGLKGDAGPPGPPGAPGVVGFPGQTGLRGEMGQP 2413

Query: 245  GPRGNRGKSGING 257
            GP G RG +G+ G
Sbjct: 2414 GPSGERGLAGLPG 2426



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 104/244 (42%), Gaps = 83/244 (34%)

Query: 112  PGLQGPIGQKGE---IGAKGE--MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PGL GP+G KGE   +GA G+  +G  G +GEKGAPG     +VG PG +G  G  G RG
Sbjct: 2275 PGLPGPVGPKGEPGPMGAPGQAVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRG 2334

Query: 162  PKGDMGYPGPQGIPGDEGKRGP------KGDMG--------------------------- 188
             KG+ G  G  G PG++G++G       KGD G                           
Sbjct: 2335 EKGEAGRAGEPGDPGEDGQKGAPGLKGNKGDPGIGVQGPLGPAGPPGLKGDAGPPGPPGA 2394

Query: 189  -----YPGRIGLDGRDGLP---GEPGLDGIPGRN-------------------------- 214
                 +PG+ GL G  G P   GE GL G+PGR                           
Sbjct: 2395 PGVVGFPGQTGLRGEMGQPGPSGERGLAGLPGREGAPGPLGPPGPPGSAGVPGPSGLKGD 2454

Query: 215  ------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                  G+ G  G+ G PG  G  G  G  G +G+TGP G+RG+ G  G  GT  +   K
Sbjct: 2455 KGDPGAGLPGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDTGTTGLKGDK 2514

Query: 269  RESC 272
             ++ 
Sbjct: 2515 GDAA 2518



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 64/136 (47%), Gaps = 41/136 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA--------------------------PGVV 145
            PG  G  G+ G  G +GE G KGERGE+G                            GV 
Sbjct: 2043 PGRAGDAGEAGRPGERGERGEKGERGEQGRDGPPGLPGPPGPPGPKVAVDELGPGLSGVQ 2102

Query: 146  GPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            GPPG +G    PG +G RGPKGD G PG             KGD G PG+ GLDG  GLP
Sbjct: 2103 GPPGLKGTKGDPGSDGDRGPKGDRGVPGI------------KGDRGEPGQRGLDGSPGLP 2150

Query: 203  GEPGLDGIPGRNGMDG 218
            GE G+ G  G+ G+ G
Sbjct: 2151 GERGVAGPEGKPGLQG 2166



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 92/232 (39%), Gaps = 75/232 (32%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPG-------- 149
            G      E   PG  G  G+KG+ G    +G  G KGERG  G+PG+ GPPG        
Sbjct: 1837 GLNGKNGEPGDPGEDGRKGEKGDSGTPGREGHEGPKGERGAPGSPGLQGPPGLPGQVGPS 1896

Query: 150  PQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGR----IGL------- 195
             QG PG  G  GPKGD G  GP   QG+PG+ G RG  G +G   R    IG+       
Sbjct: 1897 GQGFPGVPGNTGPKGDRGESGPKGEQGLPGERGLRGEPGSVGNVERLLETIGIKTSALRE 1956

Query: 196  ----------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL-------------- 225
                            D R G  G+PG  G PG+ G  G  G+ GL              
Sbjct: 1957 IVETWDESSGSFLPLPDRRRGPKGDPGERGPPGKEGPIGFSGERGLKGDRGDPGPQGPPG 2016

Query: 226  --------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                                PG  G+PG  G  GE G  G RG RG+ G  G
Sbjct: 2017 LALGERGPPGPPGLAGEPGKPGIPGLPGRAGDAGEAGRPGERGERGEKGERG 2068



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 98/229 (42%), Gaps = 76/229 (33%)

Query: 112  PGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPP----------GPQGIPG 155
            PG +GP+G+KG+ G  GE       G  G +G++G PG+ GPP          G +G PG
Sbjct: 1661 PGARGPVGEKGDQGDPGEDGRNGSPGPSGPKGDRGEPGLPGPPARLVDMGVGAGEKGEPG 1720

Query: 156  DEGKR------------GPKGDMGYPG---------PQGIPGDEGKRGPKGDMGYPGRIG 194
            D G+             G  G+ G  G           G+ G  G++G +G  G  GR G
Sbjct: 1721 DRGQEGPRGPKGDPGPPGAAGERGISGLRGPPGPQGDPGVRGPTGEKGDRGSPGLDGRSG 1780

Query: 195  LD---------------------GRDGLP------------------GEPGLDGIPGRNG 215
            LD                     GRDGLP                  G+PG DG PG NG
Sbjct: 1781 LDGKPGAPGPPGLHGAAGKAGDPGRDGLPGLRGEHGPPGPSGPPGAQGKPGEDGKPGLNG 1840

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             +G PG  G  G+ G  G +GT G +G  GP+G RG  G  G+ G P +
Sbjct: 1841 KNGEPGDPGEDGRKGEKGDSGTPGREGHEGPKGERGAPGSPGLQGPPGL 1889



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 66/130 (50%), Gaps = 23/130 (17%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            +G+ G  G+ G+ G+ GE G             PG++G++G KGD       G PG EG 
Sbjct: 1827 QGKPGEDGKPGLNGKNGEPGD------------PGEDGRKGEKGD------SGTPGREGH 1868

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGE-----PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
             GPKG+ G PG  GL G  GLPG+      G  G+PG  G  G  G+ G  G+ G+PG  
Sbjct: 1869 EGPKGERGAPGSPGLQGPPGLPGQVGPSGQGFPGVPGNTGPKGDRGESGPKGEQGLPGER 1928

Query: 236  GTNGEKGMTG 245
            G  GE G  G
Sbjct: 1929 GLRGEPGSVG 1938



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 92/178 (51%), Gaps = 17/178 (9%)

Query: 114  LQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            ++GP G+KG+ G+ G  G  G           G  GA G  G PG  G+PG  G+ GP G
Sbjct: 1760 VRGPTGEKGDRGSPGLDGRSGLDGKPGAPGPPGLHGAAGKAGDPGRDGLPGLRGEHGPPG 1819

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPG 221
              G PG QG PG++GK G  G  G PG  G DGR G  G+   PG +G  G  G  G PG
Sbjct: 1820 PSGPPGAQGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGTPGREGHEGPKGERGAPG 1879

Query: 222  KDGLPGKDGIPGTNGTNGEK-----GMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
              GL G  G+PG  G +G+      G TGP+G+RG+SG  G  G P     + E  S+
Sbjct: 1880 SPGLQGPPGLPGQVGPSGQGFPGVPGNTGPKGDRGESGPKGEQGLPGERGLRGEPGSV 1937



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 92/226 (40%), Gaps = 41/226 (18%)

Query: 111  PPGLQGPI---GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            PPGL+G     G  G+ G KG+ GV G +G++G PG  G  G  G+PG+ G  GP+G  G
Sbjct: 2104 PPGLKGTKGDPGSDGDRGPKGDRGVPGIKGDRGEPGQRGLDGSPGLPGERGVAGPEGKPG 2163

Query: 168  YPGPQGI------------------PGDEGKRGPKGDMGYPGRIGLDGRDGLP------- 202
              GP+G                    G  G +GP G  G PG  G  GR           
Sbjct: 2164 LQGPRGTPGPVGGHGDPGPPGAPGLAGSTGPQGPSGLKGEPGETGPPGRGLPGPTGAVGL 2223

Query: 203  -------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                         G PGL G  G  G  G PG+DG  GKDG  G  G  G  G+ GP G 
Sbjct: 2224 PGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGASGKDGDRGAPGVPGSPGLPGPVGP 2283

Query: 250  RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHI 295
            +G+ G  G PG   +     +     P      L+  P   G   +
Sbjct: 2284 KGEPGPMGAPGQAVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGL 2329



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 73/159 (45%), Gaps = 49/159 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------------VGPPGP 150
            PGL G  G  GE G  GE G +GE+GE+G  G                      +GP G 
Sbjct: 2040 PGLPGRAGDAGEAGRPGERGERGEKGERGEQGRDGPPGLPGPPGPPGPKVAVDELGP-GL 2098

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G+ G  G +G KGD         PG +G RGPKGD G PG   + G  G PG+ GLDG 
Sbjct: 2099 SGVQGPPGLKGTKGD---------PGSDGDRGPKGDRGVPG---IKGDRGEPGQRGLDGS 2146

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            P            GLPG+ G+    G  G+ G+ GPRG 
Sbjct: 2147 P------------GLPGERGV---AGPEGKPGLQGPRGT 2170



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 82/195 (42%), Gaps = 59/195 (30%)

Query: 105  STKEYCPPGLQGP-----------------------------------------IGQKGE 123
            ST    P GL+G                                          +G+ G+
Sbjct: 2191 STGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLPGPPGPSGLVGPQGAPGLPGQVGETGK 2250

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE--GKR 181
             GA G  G  G+ G++GAPGV   PG  G+P      GP G  G PGP G PG    G  
Sbjct: 2251 PGAPGRDGASGKDGDRGAPGV---PGSPGLP------GPVGPKGEPGPMGAPGQAVVGPP 2301

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G KG+ G PG +  D    L GEPG     G  G+ G  G+ G  G+ G PG  G +G+K
Sbjct: 2302 GAKGEKGAPGGLAGD----LVGEPGAK---GDRGLPGPRGEKGEAGRAGEPGDPGEDGQK 2354

Query: 242  GMTGPRGNRGKSGIN 256
            G  G +GN+G  GI 
Sbjct: 2355 GAPGLKGNKGDPGIG 2369



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 95/237 (40%), Gaps = 92/237 (38%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGER---------------------------------G 137
            PPG  GP G +G  GA GE+G KGER                                 G
Sbjct: 1471 PPGDIGPKGDRGLKGAVGEIGEKGERGPPGPVGPQGLPGVAGRPGAEGPEGPPGPTGRRG 1530

Query: 138  EKGAPGVVGPP--GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-----------K 184
            EKG PG  G P  GP G     G +G KGD+G  GP+G  G +G+RGP           K
Sbjct: 1531 EKGEPGRPGDPAVGPDGA----GAKGEKGDVGPTGPRGATGVKGERGPPGLVLQGDPGPK 1586

Query: 185  GDMGYPGRIGLDG------------------------------RDGLPGEPGLDGI---- 210
            GD G  G IGL G                              RDG  GE G +G     
Sbjct: 1587 GDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGLVGPRGRDGEVGEKGDEGPPGDP 1646

Query: 211  -----PGRNGMDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                  G  G+ G PG  G  G+    G PG +G NG  G +GP+G+RG+ G+ G P
Sbjct: 1647 GLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRNGSPGPSGPKGDRGEPGLPGPP 1703



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 87/239 (36%), Gaps = 90/239 (37%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------------------P 147
            PG  GP G +GE G KGE G+ GERG +G PG VG                         
Sbjct: 1904 PGNTGPKGDRGESGPKGEQGLPGERGLRGEPGSVGNVERLLETIGIKTSALREIVETWDE 1963

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG------KRGPKGDM-------------- 187
                 +P  + +RGPKGD   PG +G PG EG      +RG KGD               
Sbjct: 1964 SSGSFLPLPDRRRGPKGD---PGERGPPGKEGPIGFSGERGLKGDRGDPGPQGPPGLALG 2020

Query: 188  --------------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI-------- 219
                                G PGR G  G  G PGE G  G  G  G  G         
Sbjct: 2021 ERGPPGPPGLAGEPGKPGIPGLPGRAGDAGEAGRPGERGERGEKGERGEQGRDGPPGLPG 2080

Query: 220  ---------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                           PG  G+ G  G+ GT G  G  G  GP+G+RG  GI G  G P 
Sbjct: 2081 PPGPPGPKVAVDELGPGLSGVQGPPGLKGTKGDPGSDGDRGPKGDRGVPGIKGDRGEPG 2139



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 76/143 (53%), Gaps = 17/143 (11%)

Query: 133  KGERG--EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---- 186
            KGE+G  E GAPG+   PG  G PG+ G RGP GD+G  G +G+ G  G+ G KG+    
Sbjct: 1443 KGEKGDCEDGAPGL---PGQPGSPGERGPRGPPGDIGPKGDRGLKGAVGEIGEKGERGPP 1499

Query: 187  --MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP--GKDGIPGTNGTNGEKG 242
              +G  G  G+ GR G  G  G  G  GR G  G PG+ G P  G DG     G  GEKG
Sbjct: 1500 GPVGPQGLPGVAGRPGAEGPEGPPGPTGRRGEKGEPGRPGDPAVGPDGA----GAKGEKG 1555

Query: 243  MTGPRGNRGKSGINGVPGTPAIC 265
              GP G RG +G+ G  G P + 
Sbjct: 1556 DVGPTGPRGATGVKGERGPPGLV 1578



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 86/233 (36%), Gaps = 106/233 (45%)

Query: 134  GERGEK---------------------GAPGVVGP---PGPQGIPGDEGK------RGPK 163
            GE GEK                     GAPG  GP    G QG PG++G+       GPK
Sbjct: 1632 GEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRNGSPGPSGPK 1691

Query: 164  GDMGYP----------------GPQGIPGDEGK--------------------------- 180
            GD G P                G +G PGD G+                           
Sbjct: 1692 GDRGEPGLPGPPARLVDMGVGAGEKGEPGDRGQEGPRGPKGDPGPPGAAGERGISGLRGP 1751

Query: 181  ---------RGPKGDMGYPGRIGLDGRDGLP------------GEPGLDGIPGRNGMDGI 219
                     RGP G+ G  G  GLDGR GL             G  G  G PGR+G+ G+
Sbjct: 1752 PGPQGDPGVRGPTGEKGDRGSPGLDGRSGLDGKPGAPGPPGLHGAAGKAGDPGRDGLPGL 1811

Query: 220  ------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                        PG  G PG+DG PG NG NGE G  G  G +G+ G +G PG
Sbjct: 1812 RGEHGPPGPSGPPGAQGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGTPG 1864



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 67/160 (41%), Gaps = 46/160 (28%)

Query: 107  KEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            K  C  GL G  G KGE G  G  G+ G +G+ G PG+   PG  G PG EG  GPKGD 
Sbjct: 2626 KGAC--GLDGEKGDKGEAGPPGRPGLAGRKGDVGEPGM---PGQSGTPGKEGLIGPKGDR 2680

Query: 167  GY---PGPQGIPGDEGKRGPKGDMGYPGRIGLD------------------------GRD 199
            G+   PG +G  G++G+RG  G  G+PG  G D                        G  
Sbjct: 2681 GFDGQPGSKGDQGEKGERGSPGIGGFPGPRGNDGSSGPPGPPGSVGPKGPEGLQGQKGER 2740

Query: 200  GLPGEP--------------GLDGIPGRNGMDGIPGKDGL 225
            G PGE               G  G PG  G  G  G+  L
Sbjct: 2741 GPPGERVVGAPGAPGAPGERGEQGRPGPAGPRGEKGEAAL 2780



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 2/45 (4%)

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-IGLDGRDGLPGE 204
            G KG  G+PGP+G PG+ G RGPKG+ G PGR IG +G  GLPG+
Sbjct: 1322 GSKGSPGWPGPRGDPGERGPRGPKGEPGDPGRVIGGEG-PGLPGQ 1365



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 65/160 (40%), Gaps = 56/160 (35%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD----------------- 156
            G  G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD                 
Sbjct: 1549 GAKGEKGDVGPTGPRGATGVKGERGPPGLVLQGDPGPKGDPGDRGPIGLTGRAGPPGDSG 1608

Query: 157  ----------------------EGKRGPKGD------------MGYPGPQGIPGDEGKRG 182
                                  +G+ G KGD             G  G +G PG  G  G
Sbjct: 1609 PPGEKGDPGRPGPPGLVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVG 1668

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             KGD G PG    DGR+G PG  G  G  G  G+ G P +
Sbjct: 1669 EKGDQGDPGE---DGRNGSPGPSGPKGDRGEPGLPGPPAR 1705



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 87/229 (37%), Gaps = 78/229 (34%)

Query: 113  GLQGPIGQKGEIGAKGE-------MGVKG-----------------------ERGEKGAP 142
            GL G  G +GE G+ G        +G+K                         RG KG P
Sbjct: 1923 GLPGERGLRGEPGSVGNVERLLETIGIKTSALREIVETWDESSGSFLPLPDRRRGPKGDP 1982

Query: 143  GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ-------------------------GIPGD 177
            G  GPPG +G  G  G+RG KGD G PGPQ                         GIPG 
Sbjct: 1983 GERGPPGKEGPIGFSGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGL 2042

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-----------------------GIPGRN 214
             G+ G  G+ G PG  G  G  G  GE G D                       G+ G  
Sbjct: 2043 PGRAGDAGEAGRPGERGERGEKGERGEQGRDGPPGLPGPPGPPGPKVAVDELGPGLSGVQ 2102

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G+ G  G PG DG  G  G  G  G+ G RG  G+ G++G PG P 
Sbjct: 2103 GPPGLKGTKGDPGSDGDRGPKGDRGVPGIKGDRGEPGQRGLDGSPGLPG 2151


>gi|194222400|ref|XP_001917655.1| PREDICTED: collagen alpha-1(III) chain [Equus caballus]
          Length = 1466

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/141 (49%), Positives = 83/141 (58%), Gaps = 3/141 (2%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGEMG  G  G  G  G  GPPGP G  G  G+RGP G+ G  G +G PG  G+RG  G 
Sbjct: 395 KGEMGPAGIPGAPGLIGARGPPGPSGANGAPGQRGPAGEPGKNGAKGEPGARGERGEAGS 454

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM--- 243
            G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +G+PG  G  G++G    
Sbjct: 455 PGIPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGLPGEKGAPGDRGSPGP 514

Query: 244 TGPRGNRGKSGINGVPGTPAI 264
            GPRG  G+ G +GVPG P I
Sbjct: 515 AGPRGAAGEPGRDGVPGGPGI 535



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 96/192 (50%), Gaps = 36/192 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-------- 147
           L+  +G    +     PG +GP G+ G+ GAKGE G +GERGE G+PG+ G         
Sbjct: 409 LIGARGPPGPSGANGAPGQRGPAGEPGKNGAKGEPGARGERGEAGSPGIPGAKGEDGKDG 468

Query: 148 ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
               PG  G+PG  G+RG  G  G  GP G+PG++G     GD G PG  G  G     G
Sbjct: 469 SPGEPGANGLPGAAGERGAPGFRGPAGPNGLPGEKGA---PGDRGSPGPAGPRG---AAG 522

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------------------GMTG 245
           EPG DG+PG  G+ G+PG  G PG DG PG  G+ GE                   G  G
Sbjct: 523 EPGRDGVPGGPGIRGVPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPG 582

Query: 246 PRGNRGKSGING 257
           P+GN G  G NG
Sbjct: 583 PKGNDGAPGKNG 594



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 82/199 (41%), Gaps = 48/199 (24%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306

Query: 171 PQ---GIPGDEGKR---------------------------GPKGDMGYPGRIGLDGRDG 200
            +   G+PG  G R                           G KG++G  G  G  G  G
Sbjct: 307 ERGRPGLPGAAGSRGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSSGAPG 366

Query: 201 LPGEPGLDG------------------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             GEPG  G                    G  G  GIPG  GL G  G PG +G NG  G
Sbjct: 367 QRGEPGPQGNAGAPGPPGPPGASGSPGGKGEMGPAGIPGAPGLIGARGPPGPSGANGAPG 426

Query: 243 MTGPRGNRGKSGINGVPGT 261
             GP G  GK+G  G PG 
Sbjct: 427 QRGPAGEPGKNGAKGEPGA 445



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 86/201 (42%), Gaps = 54/201 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
           PGL+G  G  GE GA G MG +G  GE+G PG+   PG  G  G++G RG          
Sbjct: 281 PGLKGENGLPGENGAPGPMGPRGAPGERGRPGL---PGAAGSRGNDGARGSDGQPGPPGP 337

Query: 164 ----------------GDMGYPGPQGIPGDEGKRGPKGD--------------------- 186
                           G  G PG  G PG  G+ GP+G+                     
Sbjct: 338 PGTAGFPGSPGAKGEVGPAGSPGSSGAPGQRGEPGPQGNAGAPGPPGPPGASGSPGGKGE 397

Query: 187 ---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
               G PG  GL G  G PG  G +G PG+ G  G PGK+G  G+   PG  G  GE G 
Sbjct: 398 MGPAGIPGAPGLIGARGPPGPSGANGAPGQRGPAGEPGKNGAKGE---PGARGERGEAGS 454

Query: 244 TGPRGNRGKSGINGVPGTPAI 264
            G  G +G+ G +G PG P  
Sbjct: 455 PGIPGAKGEDGKDGSPGEPGA 475



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 81/186 (43%), Gaps = 39/186 (20%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  G+ G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGSRGNDGARGSDGQPGPPGPPGTAGFPGSP 347

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG++G  G++G  GP+GN                  +G+ G  G+PG P
Sbjct: 348 GAKGEVGPAGSPGSSGAPGQRGEPGPQGNAGAPGPPGPPGASGSPGGKGEMGPAGIPGAP 407

Query: 263 AICAYK 268
            +   +
Sbjct: 408 GLIGAR 413



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 85/208 (40%), Gaps = 48/208 (23%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
              G   +  E   PG +GP G  G  G KG  G +G  G  G  G  G PG  G+PG  
Sbjct: 474 GANGLPGAAGERGAPGFRGPAGPNGLPGEKGAPGDRGSPGPAGPRGAAGEPGRDGVPGGP 533

Query: 158 G---------------KRGPKGD---------------------MGYPGPQGIPGDEGKR 181
           G               K GP G                      MG+PGP+G  G  GK 
Sbjct: 534 GIRGVPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKN 593

Query: 182 GPKGDMGYPGRIGLDGRDG------------LPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G +G  G PG  G  G++G              G+ G  G+PG  G+ G+PG  G PG++
Sbjct: 594 GERGGPGGPGPPGPAGKNGETGPQGPPGPTGPSGDKGDAGLPGPQGLQGLPGTSGPPGEN 653

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G PG  G  GE G  G  G +G SG  G
Sbjct: 654 GKPGEPGPKGEAGSPGIPGGKGDSGAPG 681



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 53/112 (47%), Gaps = 27/112 (24%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G +G  G  G PG  G PGPQG+ G+ GK             G PG  G+RGP G  G P
Sbjct: 954  GARGLAGPPGMPGARGSPGPQGVKGESGK------------PGAPGHNGERGPPGPQGLP 1001

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            G  G        GEPG D         G PG DGLPG+DG PG  G  GE G
Sbjct: 1002 GLAGTA------GEPGRD---------GNPGSDGLPGRDGAPGGKGDRGENG 1038



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 32/60 (53%), Gaps = 6/60 (10%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KGD G PGPQG+ G  G  GP G+ G PG  G  G  G P      GIPG  G  G PG+
Sbjct: 629 KGDAGLPGPQGLQGLPGTSGPPGENGKPGEPGPKGEAGSP------GIPGGKGDSGAPGE 682



 Score = 40.4 bits (93), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 40/86 (46%), Gaps = 15/86 (17%)

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG---------------MDGIPGKD 223
            G RG  G  G PG  G  G  G+ GE G  G PG NG                 G PG+D
Sbjct: 954  GARGLAGPPGMPGARGSPGPQGVKGESGKPGAPGHNGERGPPGPQGLPGLAGTAGEPGRD 1013

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G PG DG+PG +G  G KG  G  G+
Sbjct: 1014 GNPGSDGLPGRDGAPGGKGDRGENGS 1039


>gi|348585142|ref|XP_003478331.1| PREDICTED: collagen alpha-1(IX) chain [Cavia porcellus]
          Length = 931

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/186 (47%), Positives = 106/186 (56%), Gaps = 24/186 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE GV+G               E+GEKG
Sbjct: 435 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEPGEAGVQGPPGAQGLRGITGITGEKGEKG 494

Query: 141 APGVVGPPGPQGI---PGDEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIG 194
           A G+ G PGPQG+   PGD+G+RGP G+ G     GPQG  G  G  GPKGD G P   G
Sbjct: 495 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGPQGSRGIPGVPGPKGDTGLP---G 551

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           +DGRDG+PG PG  G PG+ G  G  G  GLPG  GIPG  G +GEKG TG  G  G+ G
Sbjct: 552 VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVSGEKGNTGAPGKPGQLG 611

Query: 255 INGVPG 260
            +G PG
Sbjct: 612 NSGKPG 617



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 87/174 (50%), Gaps = 9/174 (5%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L  + G      E    GL G  G +G  GA G+ G +G  GE G  G  GP G +GIPG
Sbjct: 480 LRGITGITGEKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGPQGSRGIPG 539

Query: 156 DEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                GPKGD G P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G
Sbjct: 540 VP---GPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVSG 596

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PGK G  G  G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 597 EKGNTGAPGKPGQLGNSGKPGHQGPPGEVGPRGPRGLPGSRGEIGPVGSPGIPG 650



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 63/115 (54%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G PG  G+ G  G  G  G+ GI 
Sbjct: 434 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGEPGEAGVQGPPGAQGLRGITGIT 487

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 488 GEKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGPQGSRGIPGVPG 542



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 76/150 (50%), Gaps = 21/150 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG++G  G KGEIG  G  G KGE G+            QG PG+ G +GP G  G  G 
Sbjct: 436 PGMRGHKGAKGEIGEPGRQGHKGEEGD------------QGEPGEAGVQGPPGAQGLRGI 483

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            GI G++G++G +G  G PG        GLPG PG  G  G  G  G  G  G  G  GI
Sbjct: 484 TGITGEKGEKGARGLDGEPGP------QGLPGAPGDQGQRGPPGEAGPKGDRGPQGSRGI 537

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG  G  G+ G+    G  G+ GI G+PGT
Sbjct: 538 PGVPGPKGDTGLP---GVDGRDGIPGMPGT 564



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 73/153 (47%), Gaps = 21/153 (13%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIPGDEGKRG--- 161
           E  P GL G  G +G+ G  GE G KG+RG +G+   PGV GP G  G+PG +G+ G   
Sbjct: 501 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGPQGSRGIPGVPGPKGDTGLPGVDGRDGIPG 560

Query: 162 ---------------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
                            G  G PG  GIPG +G  G KG+ G PG+ G  G  G PG  G
Sbjct: 561 MPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVSGEKGNTGAPGKPGQLGNSGKPGHQG 620

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
             G  G  G  G+PG  G  G  G PG  G  G
Sbjct: 621 PPGEVGPRGPRGLPGSRGEIGPVGSPGIPGKLG 653



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 89/188 (47%), Gaps = 45/188 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G +GP G++G  GP+
Sbjct: 578 GLQGLPGVPGIPGAKG---VSGEKGNTGAPGK---PGQLGNSGKPGHQGPPGEVGPRGPR 631

Query: 173 GIPGDEGKRGPKGDMGYPGRIG------------------LDGRDGLPGEPGLD------ 208
           G+PG  G+ GP G  G PG++G                  + G  G+ GEPG        
Sbjct: 632 GLPGSRGEIGPVGSPGIPGKLGPHGSPGLPGLPGPPGLPGMKGDRGILGEPGPKGEQGAS 691

Query: 209 ---------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                          G+PG  G  G PG+ GL G +GI G  G  G +G  GPRG +G+ 
Sbjct: 692 GEEGEAGGRGDLGDTGLPGPKGSMGNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGVQGEQ 751

Query: 254 GINGVPGT 261
           G  G+PG 
Sbjct: 752 GATGLPGA 759



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 75/176 (42%), Gaps = 54/176 (30%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   ++G  G+ G +G PG VGP GP+G+PG  G+ GP G  G 
Sbjct: 589 PGAKGVSGEKGNTGAPGKPGQLGNSGKPGHQGPPGEVGPRGPRGLPGSRGEIGPVGSPGI 648

Query: 169 PGPQG------------------IPGDE---GKRGPKG---------------DMGYPGR 192
           PG  G                  + GD    G+ GPKG               D+G  G 
Sbjct: 649 PGKLGPHGSPGLPGLPGPPGLPGMKGDRGILGEPGPKGEQGASGEEGEAGGRGDLGDTGL 708

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
            G  G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 709 PGPKGSMGNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGVQGEQGATGLPGAQGPPG 764



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 62/146 (42%), Gaps = 39/146 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------- 144
            + G      +  PPG  GP G +G  G++G  GV G +G+ G PGV             
Sbjct: 506 GLPGAPGDQGQRGPPGEAGPKGDRGPQGSRGIPGVPGPKGDTGLPGVDGRDGIPGMPGTK 565

Query: 145 --------------VGPPGPQGIPGDEGKRGPKGDMGYPGP------------QGIPGDE 178
                          G PG  GIPG +G  G KG+ G PG             QG PG+ 
Sbjct: 566 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVSGEKGNTGAPGKPGQLGNSGKPGHQGPPGEV 625

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGE 204
           G RGP+G  G  G IG  G  G+PG+
Sbjct: 626 GPRGPRGLPGSRGEIGPVGSPGIPGK 651



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G++G+RGP  +G  G PG  G+PGD G       
Sbjct: 822 QMGIRGLPGVKGPPGALGLKGPKGEMGEKGERGPPGRGPKGLPGATGLPGDPG------- 874

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 875 ---PASYGRNGRDGERGPPGV 892



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 49/91 (53%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PGV GPPG  G+      +GPKG+MG  G +G PG    RGPKG         
Sbjct: 822 QMGIRGLPGVKGPPGALGL------KGPKGEMGEKGERGPPG----RGPKG--------- 862

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPG+PG     GRNG DG  G  G+
Sbjct: 863 LPGATGLPGDPGPASY-GRNGRDGERGPPGV 892


>gi|224048569|ref|XP_002192944.1| PREDICTED: collagen alpha-1(IX) chain [Taeniopygia guttata]
          Length = 918

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/198 (43%), Positives = 106/198 (53%), Gaps = 39/198 (19%)

Query: 102 FCNSTKEYCPPG---------LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPG 149
            C S    CPPG         ++G  G KGE G  G+ G KGE G++G  G VG   PPG
Sbjct: 408 LCPSA---CPPGRPGHAGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGPPG 464

Query: 150 PQGIPGDEGKRGPKGDMGY------PGPQGIPG---DEGKRGP------KGDMGYPGRIG 194
             GI G  G  GPKG  G       PGPQG+PG   D+G+RGP      KG+ G  G  G
Sbjct: 465 ILGIRGITGIMGPKGTKGARGLDGDPGPQGLPGAPGDQGQRGPLGEAGPKGERGPQGTRG 524

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---------DGIPGTNGTNGEKGMTG 245
           ++G  G  GEPGL G+ GR G+ G+PG  G PGK          G+PG  G+ G KG+ G
Sbjct: 525 INGLPGTKGEPGLPGVDGREGIPGMPGAKGEPGKPGAPGDTGLQGLPGFPGSPGMKGIPG 584

Query: 246 PRGNRGKSGINGVPGTPA 263
           P+GNRG  G+ G+ G P 
Sbjct: 585 PKGNRGPPGVPGLMGNPG 602



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/186 (42%), Positives = 99/186 (53%), Gaps = 24/186 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---------------RGEKG 140
           L+ M+G   S  E   PG QG  G++G+ G  GE+G +G                +G KG
Sbjct: 423 LMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGPPGILGIRGITGIMGPKGTKG 482

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           A G+ G PGPQG+PG   D+G+RGP G+ G  G +G  G  G  G  G  G PG  G+DG
Sbjct: 483 ARGLDGDPGPQGLPGAPGDQGQRGPLGEAGPKGERGPQGTRGINGLPGTKGEPGLPGVDG 542

Query: 198 RDGLPG------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           R+G+PG      EPG  G PG  G+ G+PG  G PG  GIPG  G  G  G+ G  GN G
Sbjct: 543 REGIPGMPGAKGEPGKPGAPGDTGLQGLPGFPGSPGMKGIPGPKGNRGPPGVPGLMGNPG 602

Query: 252 KSGING 257
           K G  G
Sbjct: 603 KQGQQG 608



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/130 (45%), Positives = 67/130 (51%), Gaps = 9/130 (6%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P GL G  G +G+ G  GE G KGERG +G  G+ G PG +G PG           G  G
Sbjct: 492 PQGLPGAPGDQGQRGPLGEAGPKGERGPQGTRGINGLPGTKGEPGLP---------GVDG 542

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            +GIPG  G +G  G  G PG  GL G  G PG PG+ GIPG  G  G PG  GL G  G
Sbjct: 543 REGIPGMPGAKGEPGKPGAPGDTGLQGLPGFPGSPGMKGIPGPKGNRGPPGVPGLMGNPG 602

Query: 231 IPGTNGTNGE 240
             G  G  GE
Sbjct: 603 KQGQQGPEGE 612



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 86/208 (41%), Gaps = 59/208 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--------------------VVGPPG--- 149
           G  GP G +G  G KG+ G  G+ G +G PG                    + GPPG   
Sbjct: 324 GFTGPDGSRGAPGPKGQKGEPGQPGARGLPGKGLLGPPGPAGAAGLPGEVGLAGPPGDPG 383

Query: 150 ------------------------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
                                         P G PG  G  G KG  G  G  G PG +G
Sbjct: 384 KRGPPGLPGPPGPXXTIGLQDGDLLCPSACPPGRPGHAGLMGMKGQKGSKGESGEPGKQG 443

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            +G +GD G  G +G  G  G+ G  G+ GI G  G  G  G DG PG  G+PG  G  G
Sbjct: 444 YKGEEGDQGPSGEVGAQGPPGILGIRGITGIMGPKGTKGARGLDGDPGPQGLPGAPGDQG 503

Query: 240 EK---GMTGPRGNRGKS---GINGVPGT 261
           ++   G  GP+G RG     GING+PGT
Sbjct: 504 QRGPLGEAGPKGERGPQGTRGINGLPGT 531



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 78/188 (41%), Gaps = 51/188 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
           GLQG  G  G  G KG  G KG RG  G PG++G PG QG  G EG+             
Sbjct: 566 GLQGLPGFPGSPGMKGIPGPKGNRGPPGVPGLMGNPGKQGQQGPEGEAGPTGPRGPPGSR 625

Query: 160 -----------------------------------RGPKGDMGYPGP---QGIPGDEGKR 181
                                              +G +G +G PGP   QG PG EG  
Sbjct: 626 GETGPAGPPGLPGKLGPQGSIGLPGLPGPPGLPGSKGDRGSVGEPGPKGEQGAPGAEGDG 685

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G KGD+G  G  G  G  G PG+PG  G  G  G+ G+ G  GLPG  G+ G  G  G  
Sbjct: 686 GEKGDLGDMGLPGAKGTVGNPGDPGSRGPEGSRGLPGMEGPRGLPGPRGLQGEQGAPGLP 745

Query: 242 GMTGPRGN 249
           G  GP G 
Sbjct: 746 GSEGPAGK 753



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 58/103 (56%), Gaps = 15/103 (14%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPK---GDMGYPGPQGI---PGDEGKRGPKGD 186
           KG+RG  G PG   P G QG PG EG  G K   GDMG PG +G    PGD G RGP+G 
Sbjct: 661 KGDRGSVGEPG---PKGEQGAPGAEGDGGEKGDLGDMGLPGAKGTVGNPGDPGSRGPEGS 717

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G P   G++G  GLPG  GL    G  G  G+PG +G  GK+
Sbjct: 718 RGLP---GMEGPRGLPGPRGLQ---GEQGAPGLPGSEGPAGKE 754



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 82/215 (38%), Gaps = 70/215 (32%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E   PG +G  G+KG++G  G  G KG  G  G PG  GP G +G+PG EG RG  G  G
Sbjct: 675 EQGAPGAEGDGGEKGDLGDMGLPGAKGTVGNPGDPGSRGPEGSRGLPGMEGPRGLPGPRG 734

Query: 168 YPGPQGIPGDEGKRGPKG------------------------------------------ 185
             G QG PG  G  GP G                                          
Sbjct: 735 LQGEQGAPGLPGSEGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRRPEFGAPGLPGRPG 794

Query: 186 ---------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                    + G+PG++G  G       PGL G PG  G  G  G+ G  G+ G PG   
Sbjct: 795 PPGAPGPAGENGFPGQLGPRGL------PGLKGPPGEIGRKGPKGEPGERGERGFPG--- 845

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
                     RG +G  G  G+PG P   +Y RE 
Sbjct: 846 ----------RGLKGHPGPRGLPGEPGKASYGREG 870



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 99/228 (43%), Gaps = 49/228 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIP 154
            + G   +  E   PG+ G  G  G  GAKGE G     G+ G +G PG  G PG +GIP
Sbjct: 524 GINGLPGTKGEPGLPGVDGREGIPGMPGAKGEPGKPGAPGDTGLQGLPGFPGSPGMKGIP 583

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------------------M 187
           G +G RGP G    PG  G PG +G++GP+G+                           +
Sbjct: 584 GPKGNRGPPG---VPGLMGNPGKQGQQGPEGEAGPTGPRGPPGSRGETGPAGPPGLPGKL 640

Query: 188 GYPGRIGL------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G IGL             G  G  GEPG  G  G  G +G  G+ G  G  G+PG  
Sbjct: 641 GPQGSIGLPGLPGPPGLPGSKGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAK 700

Query: 236 GT---NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL-LPNSE 279
           GT    G+ G  GP G+RG  G+ G  G P     + E  +  LP SE
Sbjct: 701 GTVGNPGDPGSRGPEGSRGLPGMEGPRGLPGPRGLQGEQGAPGLPGSE 748



 Score = 43.1 bits (100), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 16/88 (18%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR--IGL 195
           E G PG +GP   +G+PG    +GP G++G  GP+G PG+ G+R      G+PGR   G 
Sbjct: 804 ENGFPGQLGP---RGLPG---LKGPPGEIGRKGPKGEPGERGER------GFPGRGLKGH 851

Query: 196 DGRDGLPGEPGLD--GIPGRNGMDGIPG 221
            G  GLPGEPG    G  GR+G  G PG
Sbjct: 852 PGPRGLPGEPGKASYGREGRDGDRGPPG 879


>gi|355566039|gb|EHH22468.1| hypothetical protein EGK_05741 [Macaca mulatta]
          Length = 520

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 95/176 (53%), Gaps = 15/176 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMGYP 169
           GLQGP G  G+ GA G  G +GE+G KG  G++GP G  G  GD+G  G    KGD G  
Sbjct: 205 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGDKGDLGLPGSKGDKGMK 264

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDG---RDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  G+ G  G +G KGD G PG  GL G     G PG+PGL G+PG  G  G PG  G P
Sbjct: 265 GDAGVMGPPGAQGSKGDSGRPGSPGLAGFPGAKGDPGQPGLQGVPGPPGAVGQPGAKGEP 324

Query: 227 GKD------GIPGTNGTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCS 273
           G        G+PG+ G+ G  G+ G +G+   +G+ G+ G PG P     K E  S
Sbjct: 325 GSAGSRGLTGLPGSPGSPGAAGLKGSKGDTGLQGQQGVKGEPGVPGPAGVKGEQGS 380



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 102/197 (51%), Gaps = 15/197 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGK---------R 160
           GL GP G+ G  G KG++G+   KG++G KG  GV+GPPG QG  GD G+          
Sbjct: 235 GLIGPKGETGTKGDKGDLGLPGSKGDKGMKGDAGVMGPPGAQGSKGDSGRPGSPGLAGFP 294

Query: 161 GPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G KGD G PG QG+   PG  G+ G KG+ G  G  GL G  G PG PG  G+ G  G  
Sbjct: 295 GAKGDPGQPGLQGVPGPPGAVGQPGAKGEPGSAGSRGLTGLPGSPGSPGAAGLKGSKGDT 354

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G+ G+ G+ G+ G+PG  G  GE+G  G  G++G  G  G  G   +     E       
Sbjct: 355 GLQGQQGVKGEPGVPGPAGVKGEQGSPGLAGSKGAPGRAGQKGDQGVKGSSGERGVKGEK 414

Query: 278 SETSQLLIPPTIVGSEH 294
            ET +  +   IVGS +
Sbjct: 415 GETGENAVSVRIVGSSN 431



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 93/203 (45%), Gaps = 45/203 (22%)

Query: 108 EYCPPGLQG------------------PIGQKGEIG---------------AKGEMGVKG 134
           E  PPGLQG                    G KG  G                KGE G++G
Sbjct: 149 EQGPPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAAGRDGATGPPGPQGPPGVKGEAGLQG 208

Query: 135 ERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGD-- 186
            +G  G  G  G PGPQ   G  GD G  GPKG+ G  G +   G+PG +G +G KGD  
Sbjct: 209 PQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGDKGDLGLPGSKGDKGMKGDAG 268

Query: 187 -MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            MG PG  G  G  G PG PGL G PG  G  G PG  G+PG    PG  G  G KG  G
Sbjct: 269 VMGPPGAQGSKGDSGRPGSPGLAGFPGAKGDPGQPGLQGVPGP---PGAVGQPGAKGEPG 325

Query: 246 PRGNRGKSGINGVPGTPAICAYK 268
             G+RG +G+ G PG+P     K
Sbjct: 326 SAGSRGLTGLPGSPGSPGAAGLK 348



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 78/154 (50%), Gaps = 3/154 (1%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G+ G  G  G +G+ G PG+ G PGP G  G  G +G  G  G  G
Sbjct: 272 PPGAQGSKGDSGRPGSPGLAGFPGAKGDPGQPGLQGVPGPPGAVGQPGAKGEPGSAGSRG 331

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
             G+PG  G  G  G  G  G  GL G+ G+ GEP   G+PG  G+ G  G  GL G  G
Sbjct: 332 LTGLPGSPGSPGAAGLKGSKGDTGLQGQQGVKGEP---GVPGPAGVKGEQGSPGLAGSKG 388

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PG  G  G++G+ G  G RG  G  G  G  A+
Sbjct: 389 APGRAGQKGDQGVKGSSGERGVKGEKGETGENAV 422



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + GF  +  +   PGLQG  G  G +   G+ G KGE G  G+ G+ G PG  G PG  
Sbjct: 289 GLAGFPGAKGDPGQPGLQGVPGPPGAV---GQPGAKGEPGSAGSRGLTGLPGSPGSPGAA 345

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G +G KGD G  G QG+         KG+ G PG  G+ G  G PG  G  G PGR G  
Sbjct: 346 GLKGSKGDTGLQGQQGV---------KGEPGVPGPAGVKGEQGSPGLAGSKGAPGRAGQK 396

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G  G  G+ G+ G  G  GE  ++
Sbjct: 397 GDQGVKGSSGERGVKGEKGETGENAVS 423



 Score = 39.3 bits (90), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 54/142 (38%), Gaps = 39/142 (27%)

Query: 169 PGPQGIPGDEG------------------------KRGPKGDMG---------------Y 189
           PG  GI G++G                        ++G KG  G                
Sbjct: 141 PGMFGIKGEQGPPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAAGRDGATGPPGPQGPPGV 200

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G  GL G  G PG+ G  G PG  G  G  G  GL G  G  GT G  G+ G+ G +G+
Sbjct: 201 KGEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGDKGDLGLPGSKGD 260

Query: 250 RGKSGINGVPGTPAICAYKRES 271
           +G  G  GV G P     K +S
Sbjct: 261 KGMKGDAGVMGPPGAQGSKGDS 282


>gi|359320882|ref|XP_003639449.1| PREDICTED: collagen alpha-1(X) chain-like [Canis lupus familiaris]
          Length = 676

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/152 (48%), Positives = 87/152 (57%), Gaps = 12/152 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GPIG  G  GAKGE G  G  GE G    PG +GP GP+GIPG++G  GPKG+MG  
Sbjct: 310 GQRGPIGLPGSPGAKGEQGPAGHPGEPGLTGPPGNMGPQGPKGIPGNQGIPGPKGEMGPV 369

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G PG +G+R         G  GLDG+ G PGEPG  G  G +G+ G  G  GL G  
Sbjct: 370 GPAGHPGAKGER---------GSSGLDGKPGYPGEPGSSGPKGNSGLPGPKGDAGLRGSP 420

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G+PG  G  G KG  G  G  G  G  G+PGT
Sbjct: 421 GLPGPVGPAGAKGTPGHNGETGPRGAPGIPGT 452



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 81/159 (50%), Gaps = 17/159 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-----------------PQGIPGDEGKRG 161
           G+ G  GA G+ G+ G +G  GAPG+ G PG                 P G+PG  G +G
Sbjct: 266 GKPGAPGAPGQPGIPGTKGHPGAPGIAGSPGAPGFGKPGLPGLKGQRGPIGLPGSPGAKG 325

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            +G  G+PG  G+ G  G  GP+G  G PG  G+ G  G  G  G  G PG  G  G  G
Sbjct: 326 EQGPAGHPGEPGLTGPPGNMGPQGPKGIPGNQGIPGPKGEMGPVGPAGHPGAKGERGSSG 385

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            DG PG  G PG++G  G  G+ GP+G+ G  G  G+PG
Sbjct: 386 LDGKPGYPGEPGSSGPKGNSGLPGPKGDAGLRGSPGLPG 424



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PG  GP G  G  G KG+ G+   RG  G PG VGP G +G PG  G+ GP+G  G PG
Sbjct: 396 PGSSGPKGNSGLPGPKGDAGL---RGSPGLPGPVGPAGAKGTPGHNGETGPRGAPGIPG 451


>gi|355751638|gb|EHH55893.1| hypothetical protein EGM_05187 [Macaca fascicularis]
          Length = 520

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 95/176 (53%), Gaps = 15/176 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMGYP 169
           GLQGP G  G+ GA G  G +GE+G KG  G++GP G  G  GD+G  G    KGD G  
Sbjct: 205 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGDKGDLGLPGSKGDKGMK 264

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDG---RDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  G+ G  G +G KGD G PG  GL G     G PG+PGL G+PG  G  G PG  G P
Sbjct: 265 GDAGVMGPPGAQGSKGDSGRPGSPGLAGFPGAKGDPGQPGLQGVPGPPGAVGQPGAKGEP 324

Query: 227 GKD------GIPGTNGTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCS 273
           G        G+PG+ G+ G  G+ G +G+   +G+ G+ G PG P     K E  S
Sbjct: 325 GSAGSRGLTGLPGSPGSPGAAGLKGSKGDTGLQGQQGVKGEPGVPGPAGVKGEQGS 380



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 102/197 (51%), Gaps = 15/197 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGK---------R 160
           GL GP G+ G  G KG++G+   KG++G KG  GV+GPPG QG  GD G+          
Sbjct: 235 GLIGPKGETGTKGDKGDLGLPGSKGDKGMKGDAGVMGPPGAQGSKGDSGRPGSPGLAGFP 294

Query: 161 GPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G KGD G PG QG+   PG  G+ G KG+ G  G  GL G  G PG PG  G+ G  G  
Sbjct: 295 GAKGDPGQPGLQGVPGPPGAVGQPGAKGEPGSAGSRGLTGLPGSPGSPGAAGLKGSKGDT 354

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G+ G+ G+ G+ G+PG  G  GE+G  G  G++G  G  G  G   +     E       
Sbjct: 355 GLQGQQGVKGEPGVPGPAGVKGEQGSPGLAGSKGAPGRAGQKGDQGVKGSSGERGVKGEK 414

Query: 278 SETSQLLIPPTIVGSEH 294
            ET Q  +   IVGS +
Sbjct: 415 GETGQNAVSVRIVGSSN 431



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 93/203 (45%), Gaps = 45/203 (22%)

Query: 108 EYCPPGLQG------------------PIGQKGEIG---------------AKGEMGVKG 134
           E  PPGLQG                    G KG  G                KGE G++G
Sbjct: 149 EQGPPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAAGRDGATGPPGPQGPPGVKGEAGLQG 208

Query: 135 ERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGD-- 186
            +G  G  G  G PGPQ   G  GD G  GPKG+ G  G +   G+PG +G +G KGD  
Sbjct: 209 PQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGDKGDLGLPGSKGDKGMKGDAG 268

Query: 187 -MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            MG PG  G  G  G PG PGL G PG  G  G PG  G+PG    PG  G  G KG  G
Sbjct: 269 VMGPPGAQGSKGDSGRPGSPGLAGFPGAKGDPGQPGLQGVPGP---PGAVGQPGAKGEPG 325

Query: 246 PRGNRGKSGINGVPGTPAICAYK 268
             G+RG +G+ G PG+P     K
Sbjct: 326 SAGSRGLTGLPGSPGSPGAAGLK 348



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 78/154 (50%), Gaps = 3/154 (1%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G+ G  G  G +G+ G PG+ G PGP G  G  G +G  G  G  G
Sbjct: 272 PPGAQGSKGDSGRPGSPGLAGFPGAKGDPGQPGLQGVPGPPGAVGQPGAKGEPGSAGSRG 331

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
             G+PG  G  G  G  G  G  GL G+ G+ GEP   G+PG  G+ G  G  GL G  G
Sbjct: 332 LTGLPGSPGSPGAAGLKGSKGDTGLQGQQGVKGEP---GVPGPAGVKGEQGSPGLAGSKG 388

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PG  G  G++G+ G  G RG  G  G  G  A+
Sbjct: 389 APGRAGQKGDQGVKGSSGERGVKGEKGETGQNAV 422



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + GF  +  +   PGLQG  G  G +   G+ G KGE G  G+ G+ G PG  G PG  
Sbjct: 289 GLAGFPGAKGDPGQPGLQGVPGPPGAV---GQPGAKGEPGSAGSRGLTGLPGSPGSPGAA 345

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G +G KGD G  G QG+         KG+ G PG  G+ G  G PG  G  G PGR G  
Sbjct: 346 GLKGSKGDTGLQGQQGV---------KGEPGVPGPAGVKGEQGSPGLAGSKGAPGRAGQK 396

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G  G  G+ G+ G  G  G+  ++
Sbjct: 397 GDQGVKGSSGERGVKGEKGETGQNAVS 423



 Score = 39.3 bits (90), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 54/142 (38%), Gaps = 39/142 (27%)

Query: 169 PGPQGIPGDEG------------------------KRGPKGDMG---------------Y 189
           PG  GI G++G                        ++G KG  G                
Sbjct: 141 PGMFGIKGEQGPPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAAGRDGATGPPGPQGPPGV 200

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G  GL G  G PG+ G  G PG  G  G  G  GL G  G  GT G  G+ G+ G +G+
Sbjct: 201 KGEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGDKGDLGLPGSKGD 260

Query: 250 RGKSGINGVPGTPAICAYKRES 271
           +G  G  GV G P     K +S
Sbjct: 261 KGMKGDAGVMGPPGAQGSKGDS 282


>gi|52842850|ref|YP_096649.1| hypothetical protein lpg2644 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|378778539|ref|YP_005186978.1| tail fiber protein [Legionella pneumophila subsp. pneumophila ATCC
           43290]
 gi|52629961|gb|AAU28702.1| tail fiber protein [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|306569347|gb|ADN03206.1| HbP1 [Legionella pneumophila]
 gi|364509355|gb|AEW52879.1| tail fiber protein [Legionella pneumophila subsp. pneumophila ATCC
           43290]
          Length = 493

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 96/174 (55%), Gaps = 21/174 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG++GE G  G+ GP G QG  G +G  GPKGD G
Sbjct: 106 EAGPQGLSGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQG 165

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 166 EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDKG 225

Query: 219 IPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
             G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 226 EAGPQGLPGPKGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDRGEAGPQGLPG 279



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 98/184 (53%), Gaps = 21/184 (11%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      E  P GL GP G +GE G +G  G KG++GE G  G+ GP G QG  G +
Sbjct: 111 GLSGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQ 170

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  GPKGD G  GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  
Sbjct: 171 GLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDKGEAGPQ 230

Query: 209 GIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGIN 256
           G+PG  G  G  G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  
Sbjct: 231 GLPGPKGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGSQ 290

Query: 257 GVPG 260
           G+PG
Sbjct: 291 GLPG 294



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/188 (42%), Positives = 99/188 (52%), Gaps = 13/188 (6%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG+RGE G  G+ GP G +G  G +G  GPKGD G
Sbjct: 166 EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDKG 225

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 226 EAGPQGLPGPKGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRG 285

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP-N 277
             G  GLPG     G  G  G +G+ GP+G++G++G  G  G P       +    +P  
Sbjct: 286 EAGSQGLPGPK---GDKGEAGPQGLPGPKGDKGETGAVGPQGMPGPKGEAGDDGQGVPAG 342

Query: 278 SETSQLLI 285
            ET Q+L 
Sbjct: 343 GETGQVLA 350



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 96/174 (55%), Gaps = 21/174 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG++GE G  G+ GP G QG  G +G  GPKGD G
Sbjct: 76  EAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLSGPKGDQGEAGPQGLPGPKGDQG 135

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G +         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 136 EAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRG 195

Query: 219 IPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
             G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 196 EAGPQGLPGPKGDRGEAGPQGLPGPKGDKGEAGPQGLPGPKGDRGEAGPQGLPG 249



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/169 (45%), Positives = 92/169 (54%), Gaps = 21/169 (12%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            P G QGP G KGE G KG+ G          KG+RGE G  G+ GP G QG  G +G  
Sbjct: 54  GPQGPQGPRGDKGEAGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLS 113

Query: 161 GPKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           GPKGD G  GPQG+PG +G +         GPKGD G  G  GL G  G  GE G  G+P
Sbjct: 114 GPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLP 173

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  GLPG     G  G  G +G+ GP+G+RG++G  G+PG
Sbjct: 174 GPKGDRGEAGPQGLPGPK---GDRGEAGPQGLPGPKGDRGEAGPQGLPG 219



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 91/172 (52%), Gaps = 39/172 (22%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            P G QGP G +G+   KGE G KG++GE G         PQG+PG      PKGD G  
Sbjct: 51  IPSGPQGPQGPRGD---KGEAGPKGDQGEAG---------PQGLPG------PKGDRGEA 92

Query: 170 GPQGIPG---DEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GPQG+PG   D+G+       GPKGD G  G  GL G  G  GE G  G+PG  G  G  
Sbjct: 93  GPQGLPGPKGDQGEAGPQGLSGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEA 152

Query: 221 GKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
           G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 153 GPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG 204


>gi|397496734|ref|XP_003819183.1| PREDICTED: macrophage receptor MARCO isoform 2 [Pan paniscus]
          Length = 442

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/170 (45%), Positives = 95/170 (55%), Gaps = 18/170 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +G++G KG  G++GP G  G         +PG +G RG K
Sbjct: 127 GLQGPQGAPGKQGATGTPGPQGQKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMK 186

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRN--- 214
           GD   MG PG QG  GD G+ GP G  G+PG  G  G+ GL   PG PG  G PG     
Sbjct: 187 GDSGVMGPPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 246

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G PG+ GLPG  G PG  G  G KG TG +G +G+ G +GVPG   +
Sbjct: 247 GSAGSPGQAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGV 296



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 92/163 (56%), Gaps = 18/163 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD G+ GP       
Sbjct: 157 GLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDSGVMGPPGAQGSKGDSGRPGPPGLAGFP 216

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD 217
             KGD G PG QG+PG  G  G  G  G PG  G  G+ GL   PG PG  G+ G  G  
Sbjct: 217 GAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGQAGLPGSPGSPGATGLKGSKGDT 276

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGING 257
           G+ G+ G  G+ G+PG  G  GE+   G+ GP+G  G++G  G
Sbjct: 277 GLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPGQAGQKG 319



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G  G  G  G +G++G PG+ G PGP G  G  G +G  G  G PG
Sbjct: 194 PPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPG 253

Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G+PG  G       +G KGD G  G+ G  G  G+PG  G+ G  G  G+ G  G  G
Sbjct: 254 QAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPG 313

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G+ G  G  G++GE+G+ G +G RG++ ++
Sbjct: 314 QAGQKGDQGVKGSSGEQGVKGEKGERGENSVS 345



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 74/150 (49%), Gaps = 27/150 (18%)

Query: 143 GVVGPPGPQGIPGD---------EGKRGPKGDMGYPGPQ------------GIPGDEGKR 181
           G  G  GPQG PG          +G++G KGD G  GP+            G+PG +G R
Sbjct: 124 GEAGLQGPQGAPGKQGATGTPGPQGQKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDR 183

Query: 182 GPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G KGD   MG PG  G  G  G PG PGL G PG  G  G PG  G+PG    PG  G  
Sbjct: 184 GMKGDSGVMGPPGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGP---PGAVGHP 240

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G KG  G  G+ G++G+ G PG+P     K
Sbjct: 241 GAKGEPGSAGSPGQAGLPGSPGSPGATGLK 270



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 15/124 (12%)

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           + G+ G +GP+G  G  G  G PG +G++G KGD G    IG  G  G  GE G  G+PG
Sbjct: 122 VKGEAGLQGPQGAPGKQGATGTPGPQGQKGSKGDGGL---IGPKGETGTKGEKGDLGLPG 178

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPGTPA 263
             G  G+ G  G+ G    PG  G+ G+ G  GP         +G++G+ G+ GVPG P 
Sbjct: 179 SKGDRGMKGDSGVMGP---PGAQGSKGDSGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPG 235

Query: 264 ICAY 267
              +
Sbjct: 236 AVGH 239



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 56/141 (39%), Gaps = 33/141 (23%)

Query: 164 GDMGYPGPQGIPGDEG------------------KRGPKGDMG---------------YP 190
           G  G  G QG PG +G                  ++G KG  G                 
Sbjct: 64  GMFGIKGEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAAGRDGATGPPGPQGPPGVK 123

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  GL G  G PG+ G  G PG  G  G  G  GL G  G  GT G  G+ G+ G +G+R
Sbjct: 124 GEAGLQGPQGAPGKQGATGTPGPQGQKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDR 183

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  G +GV G P     K +S
Sbjct: 184 GMKGDSGVMGPPGAQGSKGDS 204


>gi|338718497|ref|XP_001918214.2| PREDICTED: collagen alpha-1(IX) chain-like [Equus caballus]
          Length = 1050

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 102/196 (52%), Gaps = 26/196 (13%)

Query: 89  NAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VK 133
           + Y  IP   M+G   +  E   PG QG  G++G+ G  GE G               + 
Sbjct: 522 SGYPGIP--GMRGHKGAKGEIGEPGRQGHKGEEGDQGEPGEAGAQGPPGAQGLRGITGIA 579

Query: 134 GERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G +GEKGA G  G PGPQG+   PGD+G+RGP G+ G  G +G+PG  G  G  G  G  
Sbjct: 580 GAKGEKGARGFDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGVPGSRGIPGLPGSKGDT 639

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G+DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G  G  G  
Sbjct: 640 GLPGVDGRDGIPGMPGTKGEPGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKP 699

Query: 245 GPRGNRGKSGINGVPG 260
           G  GN GK G  G PG
Sbjct: 700 GQLGNSGKPGQQGPPG 715



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 89/181 (49%), Gaps = 48/181 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G PG     GPPG QG      I G +G++G 
Sbjct: 528 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGEPGEAGAQGPPGAQGLRGITGIAGAKGEKGA 587

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQG+PG   D+G+RGP G+ G                          G  G+
Sbjct: 588 RGFDGEPGPQGLPGAPGDQGQRGPPGEAGP------------------------KGERGV 623

Query: 220 PGKDGLP------GKDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGTPAICAY 267
           PG  G+P      G  G+PG +G +G  GM G +G  GK       G+ G+PG P I   
Sbjct: 624 PGSRGIPGLPGSKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDVGLQGLPGVPGIPGA 683

Query: 268 K 268
           K
Sbjct: 684 K 684



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           GIPG  G +G KG++G PG QG  G+EG      D G PG  G  G  G  G  G+ GI 
Sbjct: 526 GIPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGEPGEAGAQGPPGAQGLRGITGIA 579

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G RG  G  G+PG P 
Sbjct: 580 GAKGEKGARGFDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGVPGSRGIPGLPG 634



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 68/140 (48%), Gaps = 15/140 (10%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG             QG PG+ G +GP 
Sbjct: 520 GRSGYPGIPGMRGHKGAKGEIGEPGRQGHKGEEGD------------QGEPGEAGAQGPP 567

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G  G  G+ G  G  G  G DG PG  G+ G PG  G   + G PG  G  GE+G+ 
Sbjct: 568 GAQGLRGITGIAGAKGEKGARGFDGEPGPQGLPGAPGDQG---QRGPPGEAGPKGERGVP 624

Query: 245 GPRGNRGKSGINGVPGTPAI 264
           G RG  G  G  G  G P +
Sbjct: 625 GSRGIPGLPGSKGDTGLPGV 644



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 70/137 (51%), Gaps = 15/137 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G  GE G KGE GV G R   G PG+ G  G  G+PG +G+            
Sbjct: 603 PGDQGQRGPPGEAGPKGERGVPGSR---GIPGLPGSKGDTGLPGVDGR------------ 647

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            GIPG  G +G  G  G PG +GL G  G+PG PG  G+ G  G  G PGK G  G  G 
Sbjct: 648 DGIPGMPGTKGEPGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGNSGK 707

Query: 232 PGTNGTNGEKGMTGPRG 248
           PG  G  GE G  GPRG
Sbjct: 708 PGQQGPPGEVGPRGPRG 724



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 68/130 (52%), Gaps = 6/130 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G++G  G++G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 598 GLPGAPGDQGQRGPPGEAGPKGERGVPGSRGIPGLPGSKGDTGLPGVDGRDGIPGMPGTK 657

Query: 158 GKRGPK------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG+ G PG+ G  G  G PG+ G  G  
Sbjct: 658 GEPGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGNSGKPGQQGPPGEV 717

Query: 212 GRNGMDGIPG 221
           G  G  G+PG
Sbjct: 718 GPRGPRGLPG 727



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 74/177 (41%), Gaps = 60/177 (33%)

Query: 112 PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK--------- 159
           PG +G  G+KG  GA    G++G  G+ G++G PG VGP GP+G+PG  G+         
Sbjct: 681 PGAKGVAGEKGNTGAPGKPGQLGNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPVGPPGP 740

Query: 160 ------------------------RGPKGDMGYPGPQGIPG---------------DEGK 180
                                   RG +G +G PGP+G  G               D G 
Sbjct: 741 PGKLGSLGSPGLPGLPGPPGLPGMRGDRGVVGEPGPKGEQGASGEEGETGERGELGDIGL 800

Query: 181 RGPKGDMGYPGRIGLDGRDGLPG---------EPGLDGIPGRNGMDGIPGKDGLPGK 228
            GPKG  G PG  G  G +G  G          PG  G+ G  G  G+PG  G PG+
Sbjct: 801 PGPKGSAGNPGEPGSRGPEGSRGLPGEEGPRGPPGPRGVQGEQGATGLPGVQGPPGR 857


>gi|306569351|gb|ADN03208.1| HbP1 [Legionella pneumophila]
          Length = 469

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 96/174 (55%), Gaps = 21/174 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG+RGE G  G+ GP G QG  G +G  GPKG+ G
Sbjct: 97  EAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGEQG 156

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 157 EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRG 216

Query: 219 IPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
             G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 217 EAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPG 270



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/198 (40%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      E  P GL GP G++GE G +G  G KG+RGE G  G+ GP G +G  G +
Sbjct: 132 GLPGPKGDQGEAGPQGLPGPKGEQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQ 191

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  GPKGD G  GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  
Sbjct: 192 GLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQ 251

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+PG  G  G  G  GLPG     G  G  G +G+ GP+G++G++G  G  G P      
Sbjct: 252 GLPGPKGDRGEAGPQGLPGPK---GDQGEAGPQGLPGPKGDKGETGAVGPQGMPGPKGEA 308

Query: 269 RESCSLLP-NSETSQLLI 285
            +    +P   ET Q+L 
Sbjct: 309 GDDGQGVPAGGETGQVLA 326



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/172 (45%), Positives = 95/172 (55%), Gaps = 21/172 (12%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            P GL GP G +GE G +G  G KG+RGE G  G+ GP G +G  G +G  GPKGD G  
Sbjct: 54  GPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEA 113

Query: 170 GPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G  
Sbjct: 114 GPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGEQGEAGPQGLPGPKGDRGEA 173

Query: 221 GKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
           G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 174 GPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG 225



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 96/174 (55%), Gaps = 21/174 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG+RGE G  G+ GP G QG  G +G  GPKGD G
Sbjct: 67  EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRG 126

Query: 168 YPGPQGIPGDEGKRG---------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G +G         PKG+ G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 127 EAGPQGLPGPKGDQGEAGPQGLPGPKGEQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRG 186

Query: 219 IPGKDGLPGK---------DGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
             G  GLPG           G+PG  G  GE   +G+ GP+G+RG++G  G+PG
Sbjct: 187 EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG 240



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 72/132 (54%), Gaps = 21/132 (15%)

Query: 147 PPGPQGIPGDEGKRG---------PKGDMGYPGPQGIPGDEGKR---------GPKGDMG 188
           P GPQG+PG +G RG         PKGD G  GPQG+PG +G R         GPKGD G
Sbjct: 52  PSGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQG 111

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G  GL G  G  GE G  G+PG  G  G  G  GLPG     G  G  G +G+ GP+G
Sbjct: 112 EAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPK---GEQGEAGPQGLPGPKG 168

Query: 249 NRGKSGINGVPG 260
           +RG++G  G+PG
Sbjct: 169 DRGEAGPQGLPG 180


>gi|410903702|ref|XP_003965332.1| PREDICTED: collagen alpha-1(XXVII) chain A-like [Takifugu rubripes]
          Length = 1692

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 99/168 (58%), Gaps = 21/168 (12%)

Query: 111  PPGLQGPI---------GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            PPG QG I         G+ G+ G KG++GV GERG  GAPG+ G PGP+   G +G +G
Sbjct: 1216 PPGPQGDIGPSGDRGERGEPGDPGYKGQVGVDGERGRPGAPGLPGHPGPR---GQQGHKG 1272

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             KGD G+ G +G PG +G RG +G  G PG  G+ G +G  G PG+DG PG++G  G+PG
Sbjct: 1273 AKGDQGHIGKKGQPGPKGSRGTEGVGGLPGPRGVVGPEGQEGMPGMDGTPGKDGSKGMPG 1332

Query: 222  KDGLPGKDGIPGTNGTN---------GEKGMTGPRGNRGKSGINGVPG 260
              G  G+ G+PG  G+          GE+G  GP+G +G  G +G PG
Sbjct: 1333 GQGDDGETGLPGKAGSRGKTGIPGLPGEQGTIGPKGEQGLRGQSGPPG 1380



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 86/155 (55%), Gaps = 6/155 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PG  GP GQ+G  GAKG+ G  G++G+      +G  GV G PGP+G+ G EG+ G  G 
Sbjct: 1259 PGHPGPRGQQGHKGAKGDQGHIGKKGQPGPKGSRGTEGVGGLPGPRGVVGPEGQEGMPGM 1318

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G PG  G  G  G +G  G+ G PG+ G  G+ G+PG PG  G  G  G  G+ G+ G 
Sbjct: 1319 DGTPGKDGSKGMPGGQGDDGETGLPGKAGSRGKTGIPGLPGEQGTIGPKGEQGLRGQSGP 1378

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGK G  G  G  G +G  GP+G  G +G  G PG
Sbjct: 1379 PGKRGFKGGMGLPGSQGDAGPKGQPGDTGEQGFPG 1413



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 95/188 (50%), Gaps = 45/188 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGI--------------- 153
           PGL+G  G+ G  G +GE+G KG++G     G+PG+ G PGPQG                
Sbjct: 760 PGLKGDKGEIGNPGEQGEIGFKGDKGILGPPGSPGIRGKPGPQGKLGEKGPDGSPGPPGP 819

Query: 154 ---------PGDEGKRGPKGD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--- 198
                    PG+ G+ GPKG     G PGP+G+PG EG  GP   +G PG  GL+GR   
Sbjct: 820 EGFPGDMGPPGENGQEGPKGKPGVRGLPGPRGLPGIEGDEGP---IGPPGLSGLEGRFGR 876

Query: 199 ---------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                    +GL GEPG+ G  G  G  G+ G  G  G+ GIPG  G  GE G+ GP G 
Sbjct: 877 KGFPGKVGSEGLKGEPGVTGSIGPTGERGLVGFIGPVGESGIPGEKGDRGETGLPGPPGE 936

Query: 250 RGKSGING 257
           +G +G  G
Sbjct: 937 KGPTGAIG 944



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/149 (46%), Positives = 83/149 (55%), Gaps = 3/149 (2%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G IGQKG  G  GE G+ GE GEKG  G  G  G QG+ G  G+ G +G+ G  GP 
Sbjct: 1016 GLLGEIGQKGPPGKVGEPGLPGEPGEKGDIGQAGNIGEQGLIGQRGEPGLEGEAGPAGPD 1075

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  GD+G  G +GD G  G  GL G++G PG  GL G+    G +G PGK G  GK G  
Sbjct: 1076 GAKGDKGDMGQEGDKGEKGENGLKGKEGTPGSSGLTGV---RGPEGKPGKFGERGKLGSK 1132

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+ G  G+ G TGP G  G  G  G  G+
Sbjct: 1133 GSKGHQGQLGETGPVGKTGPPGFVGQKGS 1161



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 91/189 (48%), Gaps = 36/189 (19%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +GP G  G  G  GE G++G++   G PG +G PGPQG  G+ G+ GPKG  G  G
Sbjct: 933  PPGEKGPTGAIGPDGPTGESGLEGKKASDGPPGKMGFPGPQGKIGEPGEPGPKGFPGVQG 992

Query: 171  PQGIPGDE---------------------GKRGP---------------KGDMGYPGRIG 194
            P G PGD+                     G++GP               KGD+G  G IG
Sbjct: 993  PSGPPGDKGIAGEPGPPGPPGTVGLLGEIGQKGPPGKVGEPGLPGEPGEKGDIGQAGNIG 1052

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              G  G  GEPGL+G  G  G DG  G  G  G++G  G  G NG KG  G  G+ G +G
Sbjct: 1053 EQGLIGQRGEPGLEGEAGPAGPDGAKGDKGDMGQEGDKGEKGENGLKGKEGTPGSSGLTG 1112

Query: 255  INGVPGTPA 263
            + G  G P 
Sbjct: 1113 VRGPEGKPG 1121



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 93/193 (48%), Gaps = 45/193 (23%)

Query: 113  GLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDM 166
            G  GP+G+ G   E G +GE G+ G  GEKG  G +GP GP G  G EGK+   GP G M
Sbjct: 908  GFIGPVGESGIPGEKGDRGETGLPGPPGEKGPTGAIGPDGPTGESGLEGKKASDGPPGKM 967

Query: 167  GYPGPQ------------GIPGDEGKRGPKGD---------------MGYPGRIGLDGRD 199
            G+PGPQ            G PG +G  GP GD               +G  G IG  G  
Sbjct: 968  GFPGPQGKIGEPGEPGPKGFPGVQGPSGPPGDKGIAGEPGPPGPPGTVGLLGEIGQKGPP 1027

Query: 200  GLPGEPGLDGIP------------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G  GEPGL G P            G  G+ G  G+ GL G+ G  G +G  G+KG  G  
Sbjct: 1028 GKVGEPGLPGEPGEKGDIGQAGNIGEQGLIGQRGEPGLEGEAGPAGPDGAKGDKGDMGQE 1087

Query: 248  GNRGKSGINGVPG 260
            G++G+ G NG+ G
Sbjct: 1088 GDKGEKGENGLKG 1100



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 88/189 (46%), Gaps = 39/189 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG---------EKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG  G  G KGE G  G +G  GERG         E G PG  G  G  G+PG  G++GP
Sbjct: 880  PGKVGSEGLKGEPGVTGSIGPTGERGLVGFIGPVGESGIPGEKGDRGETGLPGPPGEKGP 939

Query: 163  KGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G +G  GP G  G EGK+   GP G MG+PG     G+ G PGEPG  G PG  G  G 
Sbjct: 940  TGAIGPDGPTGESGLEGKKASDGPPGKMGFPGP---QGKIGEPGEPGPKGFPGVQGPSGP 996

Query: 220  P------------------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            P                        G+ G PGK G PG  G  GEKG  G  GN G+ G+
Sbjct: 997  PGDKGIAGEPGPPGPPGTVGLLGEIGQKGPPGKVGEPGLPGEPGEKGDIGQAGNIGEQGL 1056

Query: 256  NGVPGTPAI 264
             G  G P +
Sbjct: 1057 IGQRGEPGL 1065



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 99/193 (51%), Gaps = 45/193 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------VVGPPGPQGI---PGDE 157
           GL GP G KG  G  GE G+KG++GE G PG            ++GPPG  GI   PG +
Sbjct: 743 GLPGPSGLKGVPGNPGEPGLKGDKGEIGNPGEQGEIGFKGDKGILGPPGSPGIRGKPGPQ 802

Query: 158 GKRGPKG---------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           GK G KG               DMG PG  G  G +GK G +G  G  G  G++G +G  
Sbjct: 803 GKLGEKGPDGSPGPPGPEGFPGDMGPPGENGQEGPKGKPGVRGLPGPRGLPGIEGDEGPI 862

Query: 203 GEPGLDGIPGRNGMDGIPGK---DGLPGKDGIPGTNGTNGEKGMT------------GPR 247
           G PGL G+ GR G  G PGK   +GL G+ G+ G+ G  GE+G+             G +
Sbjct: 863 GPPGLSGLEGRFGRKGFPGKVGSEGLKGEPGVTGSIGPTGERGLVGFIGPVGESGIPGEK 922

Query: 248 GNRGKSGINGVPG 260
           G+RG++G+ G PG
Sbjct: 923 GDRGETGLPGPPG 935



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 86/172 (50%), Gaps = 27/172 (15%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDMGYP 169
           GP G+ G+ G KG+ GV+G  G +G PG+      +GPPG  G+ G  G++G  G +G  
Sbjct: 827 GPPGENGQEGPKGKPGVRGLPGPRGLPGIEGDEGPIGPPGLSGLEGRFGRKGFPGKVGSE 886

Query: 170 GPQGIPGDEGKRGPKGDMGY------------PGRIGLDGRDGLPGEPG---------LD 208
           G +G PG  G  GP G+ G             PG  G  G  GLPG PG          D
Sbjct: 887 GLKGEPGVTGSIGPTGERGLVGFIGPVGESGIPGEKGDRGETGLPGPPGEKGPTGAIGPD 946

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G +G++G    DG PGK G PG  G  GE G  GP+G  G  G +G PG
Sbjct: 947 GPTGESGLEGKKASDGPPGKMGFPGPQGKIGEPGEPGPKGFPGVQGPSGPPG 998



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 91/177 (51%), Gaps = 30/177 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD 165
           PG +G +G  G++G  GEMG+ G  G KG PG  G PG +G       PG++G+ G KGD
Sbjct: 724 PGPKGVLGLIGDMGPIGEMGLPGPSGLKGVPGNPGEPGLKGDKGEIGNPGEQGEIGFKGD 783

Query: 166 MGYPGPQGIPGDEGKRGPKG---------------------DMGYPGRIGLDGRDGLPGE 204
            G  GP G PG  GK GP+G                     DMG PG    +G++G  G+
Sbjct: 784 KGILGPPGSPGIRGKPGPQGKLGEKGPDGSPGPPGPEGFPGDMGPPGE---NGQEGPKGK 840

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG+ G+PG  G+ GI G +G  G  G+ G  G  G KG  G  G+ G  G  GV G+
Sbjct: 841 PGVRGLPGPRGLPGIEGDEGPIGPPGLSGLEGRFGRKGFPGKVGSEGLKGEPGVTGS 897



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 83/155 (53%), Gaps = 15/155 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKR--- 160
           GL GPIG +G  G +G +G+ G         ERG  G PG  G  G  G PGD G+R   
Sbjct: 653 GLPGPIGPEGPKGVRGFIGIPGLFGLPGPDGERGIPGEPGKRGKMGRPGFPGDFGERGPP 712

Query: 161 ---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
              G  G+MG PGP+G+ G  G  GP G+MG PG  GL G  G PGEPGL G  G  G  
Sbjct: 713 GPDGEPGEMGAPGPKGVLGLIGDMGPIGEMGLPGPSGLKGVPGNPGEPGLKGDKGEIGNP 772

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
           G  G+ G  G  GI G  G+ G +G  GP+G  G+
Sbjct: 773 GEQGEIGFKGDKGILGPPGSPGIRGKPGPQGKLGE 807



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 75/142 (52%), Gaps = 3/142 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G +G +G+ G  G  G  G+ G KG PG  G  G  G+PG  G RG  G  G PG 
Sbjct: 1301 PGPRGVVGPEGQEGMPGMDGTPGKDGSKGMPGGQGDDGETGLPGKAGSRGKTGIPGLPGE 1360

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGK 228
            QG  G +G++G +G  G PG+ G  G  GLPG   + G  G PG  G  G PG  G+ G 
Sbjct: 1361 QGTIGPKGEQGLRGQSGPPGKRGFKGGMGLPGSQGDAGPKGQPGDTGEQGFPGFLGVFGP 1420

Query: 229  DGIPGTNGTNGEKGMTGPRGNR 250
             G PG  G  G +G  GP+G  
Sbjct: 1421 KGPPGDFGAKGIRGPKGPQGTM 1442



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 81/167 (48%), Gaps = 18/167 (10%)

Query: 112  PGLQGPIGQKGEIGAK---GEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGP 162
            PGL G  G+KG+IG     GE G+ G+RGE G  G  GP GP G  GD      EG +G 
Sbjct: 1033 PGLPGEPGEKGDIGQAGNIGEQGLIGQRGEPGLEGEAGPAGPDGAKGDKGDMGQEGDKGE 1092

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            KG+ G  G +G PG  G  G +G  G PG+ G  G+ G  G  G  G  G  G  G  G 
Sbjct: 1093 KGENGLKGKEGTPGSSGLTGVRGPEGKPGKFGERGKLGSKGSKGHQGQLGETGPVGKTGP 1152

Query: 223  DGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+          G PG  G  GE G+ G  G++G  G  G PG
Sbjct: 1153 PGFVGQKGSRGTIGHVGAPGRMGQQGEPGIAGYEGHQGPQGSMGRPG 1199



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 80/161 (49%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            +  QG      E    G  GP G  G  G KG+MG +G++GEKG  G+ G  G  G  G 
Sbjct: 1051 IGEQGLIGQRGEPGLEGEAGPAGPDGAKGDKGDMGQEGDKGEKGENGLKGKEGTPGSSGL 1110

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G RGP+G  G  G +G  G +G +G +G +G  G +G  G  G  G+ G  G  G  G 
Sbjct: 1111 TGVRGPEGKPGKFGERGKLGSKGSKGHQGQLGETGPVGKTGPPGFVGQKGSRGTIGHVGA 1170

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G+ G PG  G  G  G  G  G  GP+G +G+ G +G
Sbjct: 1171 PGRMGQQGEPGIAGYEGHQGPQGSMGRPGPKGEKGEQGDDG 1211



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 86/185 (46%), Gaps = 36/185 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------VVGPPGPQGIPGD 156
           PGL G  G  GE G  GE G +G+ G  G PG                +G PGP+G+ G 
Sbjct: 673 PGLFGLPGPDGERGIPGEPGKRGKMGRPGFPGDFGERGPPGPDGEPGEMGAPGPKGVLGL 732

Query: 157 EGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  GP G+MG PGP   +G+PG+ G+ G KGD G  G  G  G  G  G+ G+ G PG 
Sbjct: 733 IGDMGPIGEMGLPGPSGLKGVPGNPGEPGLKGDKGEIGNPGEQGEIGFKGDKGILGPPGS 792

Query: 214 NGMDGIPGKDGLPGKD------------------GIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G+ G PG  G  G+                   G PG NG  G KG  G RG  G  G+
Sbjct: 793 PGIRGKPGPQGKLGEKGPDGSPGPPGPEGFPGDMGPPGENGQEGPKGKPGVRGLPGPRGL 852

Query: 256 NGVPG 260
            G+ G
Sbjct: 853 PGIEG 857



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 80/148 (54%), Gaps = 8/148 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +G +GQ+G+ G KGE G+KG+ G  G+ G+ G  GP+G PG  G+RG    +G  G +
Sbjct: 1079 GDKGDMGQEGDKGEKGENGLKGKEGTPGSSGLTGVRGPEGKPGKFGERG---KLGSKGSK 1135

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  G  G+ GP G  G PG +G  G  G  G     G PGR G  G PG  G  G  G  
Sbjct: 1136 GHQGQLGETGPVGKTGPPGFVGQKGSRGTIGH---VGAPGRMGQQGEPGIAGYEGHQGPQ 1192

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G  G KG  G +G+ GK  + G PG
Sbjct: 1193 GSMGRPGPKGEKGEQGDDGK--VEGPPG 1218



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 95/194 (48%), Gaps = 45/194 (23%)

Query: 113 GLQGPIGQKGEIGAKGE---------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           G+ GP+G  G+ G +G+          G  GE+G  G+PG  G PG QG+PG  G  GPK
Sbjct: 605 GIIGPVGLIGQTGRQGQKGYPGPPGLPGEPGEQGPVGSPGAKGYPGRQGLPGPIGPEGPK 664

Query: 164 GDMGY---------PGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRD---------GLP 202
           G  G+         PGP   +GIPG+ GKRG  G  G+PG  G  G           G P
Sbjct: 665 GVRGFIGIPGLFGLPGPDGERGIPGEPGKRGKMGRPGFPGDFGERGPPGPDGEPGEMGAP 724

Query: 203 GEPGL------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G+             G+PG +G+ G+PG  G PG  G  G  G  GE+G  G +G++
Sbjct: 725 GPKGVLGLIGDMGPIGEMGLPGPSGLKGVPGNPGEPGLKGDKGEIGNPGEQGEIGFKGDK 784

Query: 251 GKSGINGVPGTPAI 264
              GI G PG+P I
Sbjct: 785 ---GILGPPGSPGI 795



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 86/195 (44%), Gaps = 36/195 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PG  GP G KG+ G  G       +GEKG  G++GP G  G  G +G++           
Sbjct: 574 PGQAGPSGLKGKKGDPGMSPGPAPKGEKGDSGIIGPVGLIGQTGRQGQKGYPGPPGLPGE 633

Query: 161 -------GPKGDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGL---DGRDGLPGEPGL 207
                  G  G  GYPG QG+PG  G  GPKG  G+   PG  GL   DG  G+PGEPG 
Sbjct: 634 PGEQGPVGSPGAKGYPGRQGLPGPIGPEGPKGVRGFIGIPGLFGLPGPDGERGIPGEPGK 693

Query: 208 DGIPGRNGMDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  GR G  G  G+             G PG  G+ G  G  G  G  G  G  G  G+
Sbjct: 694 RGKMGRPGFPGDFGERGPPGPDGEPGEMGAPGPKGVLGLIGDMGPIGEMGLPGPSGLKGV 753

Query: 256 NGVPGTPAICAYKRE 270
            G PG P +   K E
Sbjct: 754 PGNPGEPGLKGDKGE 768



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 85/151 (56%), Gaps = 9/151 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEG---KRGPKGDM 166
            G+ G  G  GE G  G+ G +G+ G  G PG    +GP G QG+ G  G   KRG KG M
Sbjct: 1329 GMPGGQGDDGETGLPGKAGSRGKTGIPGLPGEQGTIGPKGEQGLRGQSGPPGKRGFKGGM 1388

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G PG QG  G +G+ G  G+ G+PG +G+ G  G PG+ G  GI G  G  G  G+ G+ 
Sbjct: 1389 GLPGSQGDAGPKGQPGDTGEQGFPGFLGVFGPKGPPGDFGAKGIRGPKGPQGTMGRGGVV 1448

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  GI G NG+ G +G    +GNRG++G  G
Sbjct: 1449 GPVGINGPNGSAGPRGE---KGNRGETGFQG 1476



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 77/158 (48%), Gaps = 27/158 (17%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG- 173
           +GP G  G  G  G+ G  G +G+KG PG+   P P+G  GD G  GP G +G  G QG 
Sbjct: 562 RGPRGAPGPHGNPGQAGPSGLKGKKGDPGMSPGPAPKGEKGDSGIIGPVGLIGQTGRQGQ 621

Query: 174 -----------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
                       PG++G  G  G  GYPGR       GLPG  G +G  G  G  GIPG 
Sbjct: 622 KGYPGPPGLPGEPGEQGPVGSPGAKGYPGR------QGLPGPIGPEGPKGVRGFIGIPGL 675

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GLPG D         GE+G+ G  G RGK G  G PG
Sbjct: 676 FGLPGPD---------GERGIPGEPGKRGKMGRPGFPG 704


>gi|326916335|ref|XP_003204463.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(IX) chain-like
           [Meleagris gallopavo]
          Length = 960

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/184 (44%), Positives = 103/184 (55%), Gaps = 30/184 (16%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGE---------MGVKGERGEKG 140
           L+ M+G   S  E   PG QG  G++G      E+GA+G           G+ G +G KG
Sbjct: 423 LMGMKGQKGSKGESGEPGKQGYKGEEGDQGPIGEVGAQGPPGILGIRGITGITGPKGNKG 482

Query: 141 APGVVGPPGPQGI---PGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           A G+ G PGPQG+   PGD+G+RGP   +G  G  GPQG  G  G  GPKG+ G P   G
Sbjct: 483 ARGLDGDPGPQGLPGAPGDQGQRGPLGEEGPKGERGPQGTRGINGLPGPKGESGLP---G 539

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           +DGR+G+PG PG  G PG+ G  G  G  GLPG  G PG       KG+ GP+GNRG  G
Sbjct: 540 VDGREGIPGMPGAKGEPGKPGAPGDTGPQGLPGLPGSPGM------KGIPGPKGNRGPPG 593

Query: 255 INGV 258
           + GV
Sbjct: 594 VPGV 597



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 67/136 (49%), Gaps = 21/136 (15%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKG 164
           P GL G  G +G+ G  GE G KGERG +G  G+ G PGP+G      + G EG  G  G
Sbjct: 492 PQGLPGAPGDQGQRGPLGEEGPKGERGPQGTRGINGLPGPKGESGLPGVDGREGIPGMPG 551

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G PG  G PGD G +               G  GLPG PG+ GIPG  G  G PG  G
Sbjct: 552 AKGEPGKPGAPGDTGPQ---------------GLPGLPGSPGMKGIPGPKGNRGPPGVPG 596

Query: 225 LPGKDGIPGTNGTNGE 240
           + G  G PG  G  GE
Sbjct: 597 VMGNSGKPGEQGPEGE 612



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 105/278 (37%), Gaps = 64/278 (23%)

Query: 33  SNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYS 92
            N+  R +D D G      +P  P  +     L EE  + E+  Q +   N        S
Sbjct: 479 GNKGARGLDGDPG---PQGLPGAPGDQGQRGPLGEEGPKGERGPQGTRGINGLPGPKGES 535

Query: 93  RIPLV-------AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV 145
            +P V        M G      +   PG  GP G  G  G+ G  G+ G +G +G PGV 
Sbjct: 536 GLPGVDGREGIPGMPGAKGEPGKPGAPGDTGPQGLPGLPGSPGMKGIPGPKGNRGPPGVP 595

Query: 146 GPPGPQGIPGDEG------------------------------KRGPKGDM--------- 166
           G  G  G PG++G                              K GP+GD+         
Sbjct: 596 GVMGNSGKPGEQGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQGDIGLPGLPGPP 655

Query: 167 ------------GYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                       G PGP   QG PG EG  G KGD+G  G  G  G  G PG+PG  G  
Sbjct: 656 GLPGGKGDRGSAGEPGPKGEQGAPGSEGDAGEKGDLGDMGLPGAKGSVGNPGDPGSRGPE 715

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           G  G+ G+ G  G PG  G+ G  G  G  G  GP G 
Sbjct: 716 GSRGLPGMEGPRGAPGPRGLQGERGAPGLPGSQGPAGK 753



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 68/121 (56%), Gaps = 12/121 (9%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G PG  G+ G +G++G KG+ G PG QG  G+EG +GP G+      +G  G  G+ G  
Sbjct: 416 GRPGHAGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPIGE------VGAQGPPGILGIR 469

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKS---GINGVP 259
           G+ GI G  G  G  G DG PG  G+PG  G  G++   G  GP+G RG     GING+P
Sbjct: 470 GITGITGPKGNKGARGLDGDPGPQGLPGAPGDQGQRGPLGEEGPKGERGPQGTRGINGLP 529

Query: 260 G 260
           G
Sbjct: 530 G 530



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 79/213 (37%), Gaps = 77/213 (36%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPK---GDMGYPGPQGI---PGDEGKRGPKGD 186
           KG+RG  G PG   P G QG PG EG  G K   GDMG PG +G    PGD G RGP+G 
Sbjct: 661 KGDRGSAGEPG---PKGEQGAPGSEGDAGEKGDLGDMGLPGAKGSVGNPGDPGSRGPEGS 717

Query: 187 MGYPGR---------IGLDGRDGLPGEPGLDGIPGR------------------------ 213
            G PG           GL G  G PG PG  G  G+                        
Sbjct: 718 RGLPGMEGPRGAPGPRGLQGERGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLSQLAA 777

Query: 214 ---------------------------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                                      NG  G  G  GLPG  G PG  G  G KG  G 
Sbjct: 778 SLRRPEFGAPGLPGRPGPPGAPGPPGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEAGE 837

Query: 247 RGNR--------GKSGINGVPGTPAICAYKRES 271
           RG R        G  G  G+PG P   +Y RE 
Sbjct: 838 RGERGFPGRGVKGLPGPRGLPGEPGKPSYGREG 870



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 89/221 (40%), Gaps = 54/221 (24%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIP 154
            + G      E   PG+ G  G  G  GAKGE G     G+ G +G PG+ G PG +GIP
Sbjct: 524 GINGLPGPKGESGLPGVDGREGIPGMPGAKGEPGKPGAPGDTGPQGLPGLPGSPGMKGIP 583

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEG------------------------------KRGPK 184
           G +G RGP G  G  G  G PG++G                              K GP+
Sbjct: 584 GPKGNRGPPGVPGVMGNSGKPGEQGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQ 643

Query: 185 GDM------------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GD+                  G  G  G  G  G PG  G  G  G  G  G+PG  G  
Sbjct: 644 GDIGLPGLPGPPGLPGGKGDRGSAGEPGPKGEQGAPGSEGDAGEKGDLGDMGLPGAKGSV 703

Query: 227 GKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAI 264
           G  G PG+ G  G +   GM GPRG  G  G+ G  G P +
Sbjct: 704 GNPGDPGSRGPEGSRGLPGMEGPRGAPGPRGLQGERGAPGL 744



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 21/93 (22%)

Query: 138 EKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-- 192
           E G PG +GP   PG +G PG+ G++GPKG+ G                +G+ G+PGR  
Sbjct: 804 ENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEAGE---------------RGERGFPGRGV 848

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            GL G  GLPGEPG     GR G DG+ G  G+
Sbjct: 849 KGLPGPRGLPGEPGKPSY-GREGRDGVRGPPGV 880


>gi|313229600|emb|CBY18415.1| unnamed protein product [Oikopleura dioica]
          Length = 892

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 94/193 (48%), Gaps = 38/193 (19%)

Query: 112 PGLQGPIGQKGEIG--------------AKGEMGVKGERGEKGAPGVVGPPGPQ-GIPGD 156
           PGLQGP G  G  G               KG  G KGERGE G PG+    G    IPG 
Sbjct: 387 PGLQGPPGADGRSGEDGLPGIPGIDGISVKGATGPKGERGEAGPPGIAAEIGELVSIPGP 446

Query: 157 EGKRGPKGDMGYP--GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG-------------- 200
           +G++G  G+ G    GP G  GD+G++GP G MG PGR G  G DG              
Sbjct: 447 KGEKGASGEPGESIIGPAGRNGDQGEQGPAGQMGMPGRPGRPGEDGQPGSPGPPGPAASV 506

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + GEP +       G+ G PGKDGLPG+ G+ G +G  G  G  GPRG  G  G +G+PG
Sbjct: 507 VAGEPVV-------GLPGAPGKDGLPGRHGMDGKDGQQGPPGERGPRGYEGPPGQHGMPG 559

Query: 261 TPAICAYKRESCS 273
               C     SCS
Sbjct: 560 PEGSCTTTECSCS 572



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 66/108 (61%), Gaps = 9/108 (8%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
           G+PG +G+RGP+G      P+G  G +G+RGP G  G PG+ G DG++GL    GEPG  
Sbjct: 130 GLPGKQGERGPEG------PRGADGKDGERGPAGADGLPGKDGADGKNGLDGKNGEPGQQ 183

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G  G+DG+ G  G  GKDG  G  G  GE+G  G +G  GK+G++
Sbjct: 184 GPAGERGLDGLDGPAGPAGKDGAQGAQGIQGERGEKGDQGEPGKNGMH 231



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 103/198 (52%), Gaps = 16/198 (8%)

Query: 63  PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKG 122
           PD +++  ER +++  ST   P   L+A + +P  A+ G  +      P G +G  G  G
Sbjct: 250 PDSFQDRFERGRQRGFSTR--PCRTLSAMTILPQ-ALSGLLDLLD---PKGNKGDKGDMG 303

Query: 123 EIGAKGEMGVKGERGEKGAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           E G  G +G  G  G+ GAPG   V P    G+      RG + + G  GPQG  G  G+
Sbjct: 304 ERGHDGPVGPMGPAGDIGAPGFCTVIPLDANGVDIAASYRGTR-EPGVAGPQGPQGPAGQ 362

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           RG  G  G  G  G DG DG  G PGL G P   G DG  G+DGLP   GIPG +G +  
Sbjct: 363 RGETGTAGLKGEKGEDGLDGRNGIPGLQGPP---GADGRSGEDGLP---GIPGIDGIS-V 415

Query: 241 KGMTGPRGNRGKSGINGV 258
           KG TGP+G RG++G  G+
Sbjct: 416 KGATGPKGERGEAGPPGI 433



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G++G  G +G  G  GERG  GA G+   PG  G  G  G  G  G+ G  GP
Sbjct: 129 PGLPGKQGERGPEGPRGADGKDGERGPAGADGL---PGKDGADGKNGLDGKNGEPGQQGP 185

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G +G  GP G  G  G  G  G  G  GE G  G PG+NGM
Sbjct: 186 AGERGLDGLDGPAGPAGKDGAQGAQGIQGERGEKGDQGEPGKNGM 230



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G +GE G +G RG  G  G  GP G  G+PG   K G  G  G  G  G PG +G  G +
Sbjct: 133 GKQGERGPEGPRGADGKDGERGPAGADGLPG---KDGADGKNGLDGKNGEPGQQGPAGER 189

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           G  G  G  G  G+DG  G  G+ G  G  G  G PGK+G+
Sbjct: 190 GLDGLDGPAGPAGKDGAQGAQGIQGERGEKGDQGEPGKNGM 230



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMG 167
           P G  G  G++G  GA G  G  G  G+ G  G  G PG QG  G+   +G  GP G  G
Sbjct: 143 PRGADGKDGERGPAGADGLPGKDGADGKNGLDGKNGEPGQQGPAGERGLDGLDGPAGPAG 202

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
             G QG  G +G+RG KGD G PG+ G+
Sbjct: 203 KDGAQGAQGIQGERGEKGDQGEPGKNGM 230


>gi|395822058|ref|XP_003784341.1| PREDICTED: collagen alpha-1(XXIV) chain [Otolemur garnettii]
          Length = 1864

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 95/178 (53%), Gaps = 12/178 (6%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V + G   +T +  PPG  G    +GE G KGE G +G++G+KGAPG  G PG   IPG 
Sbjct: 1381 VGVPGLRGATGQQGPPGEPG---DQGEQGLKGEKGSEGQKGKKGAPGPSGKPG---IPGL 1434

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G  GP+G  G PG  GI G+ GK G  G  G PG  G  GR GL G PG  G+ G +G+
Sbjct: 1435 PGLPGPQGMQGQPGADGISGNAGKVGLPGKQGLPGIRGSPGRTGLAGSPGPRGVKGSSGL 1494

Query: 217  DGIPG------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G PG      + GLPG+ GIPG  G  G +G  GP G  G  G  G  G   +  ++
Sbjct: 1495 PGSPGVLGPKGEQGLPGQPGIPGKRGHRGAQGDQGPCGEPGLKGQPGEAGVQGLTGFQ 1552



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/189 (41%), Positives = 104/189 (55%), Gaps = 23/189 (12%)

Query: 92   SRIP--LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------ 143
            SR P  L   QG   +  E    G +GP G  G+IG +G+ G +G  G +G PG      
Sbjct: 1079 SRGPDGLSGEQGLQGAKGEKGDQGKRGPHGLTGKIGNRGDRGAQGNPGSQGPPGSTGDRG 1138

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDG 200
            + G PGP+G+   +G+ GP G+MG  GP G+ G+   +G+ GPKGD+G  G +G      
Sbjct: 1139 LAGEPGPRGL---QGEAGPPGEMGIEGPPGLEGESGLQGEPGPKGDVGPLGSVGGT---- 1191

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GEPGL G PG  G DG+ GKDGL   PG  G+PG +G  GE G++G  G  G+ G  G
Sbjct: 1192 --GEPGLRGEPGAPGEDGLQGKDGLKGTPGARGLPGEDGEKGEMGLSGTLGPVGRMGQMG 1249

Query: 258  VPGTPAICA 266
            +PG   I  
Sbjct: 1250 LPGPEGIVG 1258



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 86/148 (58%), Gaps = 6/148 (4%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            E G +GE GV+G +G  G PG+ G  G QG PG+       GD G  G +G  G EG++G
Sbjct: 1365 EQGERGEPGVEGYKGHVGVPGLRGATGQQGPPGE------PGDQGEQGLKGEKGSEGQKG 1418

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             KG  G  G+ G+ G  GLPG  G+ G PG +G+ G  GK GLPGK G+PG  G+ G  G
Sbjct: 1419 KKGAPGPSGKPGIPGLPGLPGPQGMQGQPGADGISGNAGKVGLPGKQGLPGIRGSPGRTG 1478

Query: 243  MTGPRGNRGKSGINGVPGTPAICAYKRE 270
            + G  G RG  G +G+PG+P +   K E
Sbjct: 1479 LAGSPGPRGVKGSSGLPGSPGVLGPKGE 1506



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 86/166 (51%), Gaps = 9/166 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD 165
            PG  G  G  G++G  G+ G+ G RG  G  G+ G PGP+G+      PG  G  GPKG+
Sbjct: 1447 PGADGISGNAGKVGLPGKQGLPGIRGSPGRTGLAGSPGPRGVKGSSGLPGSPGVLGPKGE 1506

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G PG  GIPG  G RG +GD G  G  GL G+   PGE G+ G+ G  G  G  G +G 
Sbjct: 1507 QGLPGQPGIPGKRGHRGAQGDQGPCGEPGLKGQ---PGEAGVQGLTGFQGFPGPKGPEGD 1563

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             G  G+ G  G  G++G TGP G  G  G  G  G      ++ ES
Sbjct: 1564 AGLSGLSGPKGPTGQRGNTGPLGREGIIGPTGRNGPRGEKGFRGES 1609



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/147 (43%), Positives = 87/147 (59%), Gaps = 3/147 (2%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPGL+G  G +GE G KG++G  G  G  G PG+ G P   G PG++G +G  G  G PG
Sbjct: 1163 PPGLEGESGLQGEPGPKGDVGPLGSVGGTGEPGLRGEP---GAPGEDGLQGKDGLKGTPG 1219

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
             +G+PG++G++G  G  G  G +G  G+ GLPG  G+ GIPG+ G  G  G  G  G  G
Sbjct: 1220 ARGLPGEDGEKGEMGLSGTLGPVGRMGQMGLPGPEGIVGIPGQRGRPGKKGDKGQIGPIG 1279

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGING 257
              G+ G+ G+ G +GP+G RG  G  G
Sbjct: 1280 EVGSRGSPGQIGKSGPKGARGTRGAAG 1306



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 90/180 (50%), Gaps = 12/180 (6%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            QG   ST +    G  GP G +GE G  GEMG++G  G +G  G+ G PGP+G  G  G 
Sbjct: 1128 QGPPGSTGDRGLAGEPGPRGLQGEAGPPGEMGIEGPPGLEGESGLQGEPGPKGDVGPLGS 1187

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD----------- 208
             G  G+ G  G  G PG++G +G  G  G PG  GL G DG  GE GL            
Sbjct: 1188 VGGTGEPGLRGEPGAPGEDGLQGKDGLKGTPGARGLPGEDGEKGEMGLSGTLGPVGRMGQ 1247

Query: 209  -GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             G+PG  G+ GIPG+ G PGK G  G  G  GE G  G  G  GKSG  G  GT     +
Sbjct: 1248 MGLPGPEGIVGIPGQRGRPGKKGDKGQIGPIGEVGSRGSPGQIGKSGPKGARGTRGAAGH 1307



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/156 (43%), Positives = 85/156 (54%), Gaps = 9/156 (5%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL GP G +G+ GA    G  G  G  G++G PG+ G PG  G+ G  G RG KG  G 
Sbjct: 1435 PGLPGPQGMQGQPGADGISGNAGKVGLPGKQGLPGIRGSPGRTGLAGSPGPRGVKGSSGL 1494

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            PG  G+ G +G++G  G  G PG+    G  G  G  GEPGL G PG  G+ G+ G  G 
Sbjct: 1495 PGSPGVLGPKGEQGLPGQPGIPGKRGHRGAQGDQGPCGEPGLKGQPGEAGVQGLTGFQGF 1554

Query: 226  P---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            P   G +G  G +G +G KG TG RGN G  G  G+
Sbjct: 1555 PGPKGPEGDAGLSGLSGPKGPTGQRGNTGPLGREGI 1590



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 87/188 (46%), Gaps = 27/188 (14%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            V  QG      E  P GL G +G  G IG KG+ G  G  G +G  GV+           
Sbjct: 993  VGDQGNIGKIGETGPVGLPGEVGTTGSIGEKGDRGGPGPVGSQGEKGVMGYPGPPGVPGP 1052

Query: 146  -------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                         GPPG QG  G  G RGP G  G  G QG  G++G +G +G  G  G+
Sbjct: 1053 MGPLGLPGPAGARGPPGSQGPKGQRGSRGPDGLSGEQGLQGAKGEKGDQGKRGPHGLTGK 1112

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            IG  G  G  G PG  G PG  G  G+ G+   PG  G+ G  G  GE G+ GP G  G+
Sbjct: 1113 IGNRGDRGAQGNPGSQGPPGSTGDRGLAGE---PGPRGLQGEAGPPGEMGIEGPPGLEGE 1169

Query: 253  SGINGVPG 260
            SG+ G PG
Sbjct: 1170 SGLQGEPG 1177



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 96/196 (48%), Gaps = 27/196 (13%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
             ++G      E  P G  GP+G     GE G +GE G  GE G +G  G+ G PG +G+P
Sbjct: 1165 GLEGESGLQGEPGPKGDVGPLGSVGGTGEPGLRGEPGAPGEDGLQGKDGLKGTPGARGLP 1224

Query: 155  GDEGKRGPKG------------DMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G++G++G  G             MG PGP+   GIPG  G+ G KGD G  G IG  G  
Sbjct: 1225 GEDGEKGEMGLSGTLGPVGRMGQMGLPGPEGIVGIPGQRGRPGKKGDKGQIGPIGEVGSR 1284

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            G PG+ G  G  G  G  G  G  GL          G  GE G+ G RG++G+ G++G+P
Sbjct: 1285 GSPGQIGKSGPKGARGTRGAAGHLGL---------MGPGGETGIPGYRGHQGQPGLSGLP 1335

Query: 260  GTPAICAYKRESCSLL 275
            G      Y  E  ++L
Sbjct: 1336 GPKGEKGYPGEDSTVL 1351



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 82/175 (46%), Gaps = 27/175 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYP 169
            G +G  GQKG  G  G  G+KGE G++G  G +G  GP G+PG+    G  G KGD G P
Sbjct: 970  GPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGTTGSIGEKGDRGGP 1029

Query: 170  GPQG------------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            GP G                        +PG  G RGP G  G  G+ G  G DGL GE 
Sbjct: 1030 GPVGSQGEKGVMGYPGPPGVPGPMGPLGLPGPAGARGPPGSQGPKGQRGSRGPDGLSGEQ 1089

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL G  G  G  G  G  GL GK G  G  G  G  G  GP G+ G  G+ G PG
Sbjct: 1090 GLQGAKGEKGDQGKRGPHGLTGKIGNRGDRGAQGNPGSQGPPGSTGDRGLAGEPG 1144



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/153 (44%), Positives = 86/153 (56%), Gaps = 6/153 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPGLQG   ++G  G  G +G  G  G +G  G  G PGP+G+ G  G  G  G +G  G
Sbjct: 728 PPGLQG---EQGIPGFAGNIGSPGYPGRQGLAGPEGSPGPKGVRGFIGSPGEAGQLGPEG 784

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPG 227
            +G+PG  GK+G KG  G+PG  G  G  GL G PGL    G PG  G+ G  G  G  G
Sbjct: 785 ERGVPGIRGKKGLKGRQGFPGDFGERGPAGLDGSPGLVGGIGPPGFPGLRGSVGSVGAIG 844

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             GIPG  G +G KG+ G +G++G+ GI G PG
Sbjct: 845 PSGIPGPMGLSGNKGLPGIKGDKGEQGIAGEPG 877



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 87/178 (48%), Gaps = 33/178 (18%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            L+G  G++G IG  GE+G +G+ G+KG     G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 953  LKGTQGEEGPIGPFGELGPRGKPGQKG---YAGEPGPEGLKGEVGDQGNIGKIGETGPVG 1009

Query: 174  IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
            +PG+    G  G KGD G PG +G  G  G                  LPG  G  G PG
Sbjct: 1010 LPGEVGTTGSIGEKGDRGGPGPVGSQGEKGVMGYPGPPGVPGPMGPLGLPGPAGARGPPG 1069

Query: 213  RN---------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                       G DG+ G+ GL G  G  G  G  G  G+TG  GNRG  G  G PG+
Sbjct: 1070 SQGPKGQRGSRGPDGLSGEQGLQGAKGEKGDQGKRGPHGLTGKIGNRGDRGAQGNPGS 1127



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 81/158 (51%), Gaps = 24/158 (15%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIP---------GDEGKR------------GPKGD 165
           +G  G+ G  G  G PG+ GP GP+G P         G++G+R            G KG 
Sbjct: 663 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPRQAVSGEKGERGLGGLMGPPGMQGNKGL 722

Query: 166 MGYPGPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            GYPGP G+ G++G  G  G++   GYPGR GL G +G PG  G+ G  G  G  G  G 
Sbjct: 723 KGYPGPPGLQGEQGIPGFAGNIGSPGYPGRQGLAGPEGSPGPKGVRGFIGSPGEAGQLGP 782

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G  G  GI G  G  G +G  G  G RG +G++G PG
Sbjct: 783 EGERGVPGIRGKKGLKGRQGFPGDFGERGPAGLDGSPG 820



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 82/205 (40%), Gaps = 57/205 (27%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           +   G+        P G  GP G +G IG+ GE G  G  GE+G PG+ G  G    QG 
Sbjct: 744 IGSPGYPGRQGLAGPEGSPGPKGVRGFIGSPGEAGQLGPEGERGVPGIRGKKGLKGRQGF 803

Query: 154 PGDEGKRGPKGDMGYPG------------------------PQGIPGDEGKRGPKGDMGY 189
           PGD G+RGP G  G PG                        P GIPG  G     G+ G 
Sbjct: 804 PGDFGERGPAGLDGSPGLVGGIGPPGFPGLRGSVGSVGAIGPSGIPGPMGL---SGNKGL 860

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------------------- 230
           PG  G  G  G+ GEPG  G PG  G  G+ G  G+ GK G                   
Sbjct: 861 PGIKGDKGEQGIAGEPGEAGYPGDKGAIGLSGPPGMRGKPGPSGPIGDPGPQGPSGPPGP 920

Query: 231 --------IPGTNGTNGEKGMTGPR 247
                   IPG NG  G KG+ G R
Sbjct: 921 EGFPGDIGIPGQNGPEGPKGLLGNR 945



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 95/208 (45%), Gaps = 51/208 (24%)

Query: 99   MQGFCNSTKEYCPPGLQGPIGQKGEIGA------KGEMGVKGERGE------KGAPGVVG 146
            ++G   S     P G+ GP+G  G  G       KGE G+ GE GE      KGA G+ G
Sbjct: 833  LRGSVGSVGAIGPSGIPGPMGLSGNKGLPGIKGDKGEQGIAGEPGEAGYPGDKGAIGLSG 892

Query: 147  PPGPQG------------------------------IPGDEGKRGPKGDMG---YPGPQG 173
            PPG +G                              IPG  G  GPKG +G    PGP G
Sbjct: 893  PPGMRGKPGPSGPIGDPGPQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPG 952

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGLPG 227
            + G +G+ GP G  G  G  G  G+ G  GEPG +G+ G  G  G  GK       GLPG
Sbjct: 953  LKGTQGEEGPIGPFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPG 1012

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            + G  G+ G  G++G  GP G++G+ G+
Sbjct: 1013 EVGTTGSIGEKGDRGGPGPVGSQGEKGV 1040



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 58/132 (43%), Gaps = 33/132 (25%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGD-------------------------------- 186
           KRGP+G  G  G  G+PG  G +GPKGD                                
Sbjct: 662 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPRQAVSGEKGERGLGGLMGPPGMQGNKG 721

Query: 187 -MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             GYPG  GL G  G+PG  G  G PG  G  G+ G +G PG  G+ G  G+ GE G  G
Sbjct: 722 LKGYPGPPGLQGEQGIPGFAGNIGSPGYPGRQGLAGPEGSPGPKGVRGFIGSPGEAGQLG 781

Query: 246 PRGNRGKSGING 257
           P G RG  GI G
Sbjct: 782 PEGERGVPGIRG 793


>gi|194376364|dbj|BAG62941.1| unnamed protein product [Homo sapiens]
          Length = 442

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/170 (46%), Positives = 95/170 (55%), Gaps = 18/170 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +GE+G KG  G++GP G  G         +PG +G RG K
Sbjct: 127 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMK 186

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNG-- 215
           GD   MG PG QG  GD G+ GP G  G+PG  G  G+ GL   PG PG  G PG  G  
Sbjct: 187 GDAGVMGPPGAQGSKGDFGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 246

Query: 216 -MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G PG+ GLPG  G PG  G  G KG TG +G +G+ G +GVPG   +
Sbjct: 247 GSAGSPGRAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGV 296



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 102/193 (52%), Gaps = 21/193 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD G+ GP       
Sbjct: 157 GLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQGSKGDFGRPGPPGLAGFP 216

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD 217
             KGD G PG QG+PG  G  G  G  G PG  G  GR GL   PG PG  G+ G  G  
Sbjct: 217 GAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGSKGDT 276

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPR---GNRGKSGINGVPGTPAICAYKRES 271
           G+ G+ G  G+ G+PG  G  GE+   G+ GP+   G  G+ G  GV G+      K E 
Sbjct: 277 GLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPGQAGQKGDQGVKGSSGEQGVKGEK 336

Query: 272 CSLLPNSETSQLL 284
                NS + +++
Sbjct: 337 GERGENSVSVRIV 349



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 86/176 (48%), Gaps = 33/176 (18%)

Query: 123 EIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E GAKG MG               VKGE G +G  G  G  G  G PG +G++G KGD G
Sbjct: 98  EKGAKGAMGRDGATGPSGPQGPPGVKGEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGG 157

Query: 168 YPGPQ------------GIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPG 212
             GP+            G+PG +G RG KGD   MG PG  G  G  G PG PGL G PG
Sbjct: 158 LIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQGSKGDFGRPGPPGLAGFPG 217

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G PG  G+PG    PG  G  G KG  G  G+ G++G+ G PG+P     K
Sbjct: 218 AKGDQGQPGLQGVPGP---PGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLK 270



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G  G  G  G +G++G PG+ G PGP G  G  G +G  G  G PG
Sbjct: 194 PPGAQGSKGDFGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPG 253

Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G+PG  G       +G KGD G  G+ G  G  G+PG  G+ G  G  G+ G  G  G
Sbjct: 254 RAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPG 313

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G+ G  G  G++GE+G+ G +G RG++ ++
Sbjct: 314 QAGQKGDQGVKGSSGEQGVKGEKGERGENSVS 345



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 52/132 (39%), Gaps = 33/132 (25%)

Query: 170 GPQGIPGDEG------------------KRGPKGDMG---------------YPGRIGLD 196
           G QG PG +G                  ++G KG MG                 G  GL 
Sbjct: 70  GEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAMGRDGATGPSGPQGPPGVKGEAGLQ 129

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G PG+ G  G PG  G  G  G  GL G  G  GT G  G+ G+ G +G+RG  G  
Sbjct: 130 GPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDA 189

Query: 257 GVPGTPAICAYK 268
           GV G P     K
Sbjct: 190 GVMGPPGAQGSK 201


>gi|351698160|gb|EHB01079.1| Collagen alpha-1(VII) chain, partial [Heterocephalus glaber]
          Length = 2833

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 93/167 (55%), Gaps = 4/167 (2%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKGDM 166
            +  P GL GP G +G+ G KG+ G  G +G+KG   V+ GPPGP+G  GD G+RGP+G  
Sbjct: 2386 QEGPRGLMGPPGSRGDQGKKGDAGTAGLKGDKGDSAVIEGPPGPRGAKGDMGERGPRGLD 2445

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G  GP+G  G+ G +G KG+ G  G  GL    G PG PG+ G PG  G DG PG  G  
Sbjct: 2446 GDQGPRGDSGNPGDKGAKGEPGDKGMAGLCSPQGEPGAPGMAGDPGTPGKDGAPGFRGDK 2505

Query: 227  GKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGTPAICAYKRE 270
            G  G  G  G  GE+G+ G     G +G  G  G+PG P +   K E
Sbjct: 2506 GDVGFMGPRGIKGERGVKGACGLDGEKGDKGEAGLPGRPGLAGRKGE 2552



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 91/167 (54%), Gaps = 15/167 (8%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE------------RGEKGAPGVVGP 147
            +G      E  P GL G  G +G+ G  G+ G KGE            +GE GAPG+ G 
Sbjct: 2430 RGAKGDMGERGPRGLDGDQGPRGDSGNPGDKGAKGEPGDKGMAGLCSPQGEPGAPGMAGD 2489

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            PG  G  G  G RG KGD+G+ GP+GI   +G+RG KG  G  G  G  G  GLPG PGL
Sbjct: 2490 PGTPGKDGAPGFRGDKGDVGFMGPRGI---KGERGVKGACGLDGEKGDKGEAGLPGRPGL 2546

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G  G+PG+ G+PGK+G+ G  G  G  G  GP G++G+ G
Sbjct: 2547 AGRKGEIGEPGMPGQSGIPGKEGLIGPKGDRGFDGQAGPTGDQGEKG 2593



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 83/219 (37%), Positives = 99/219 (45%), Gaps = 70/219 (31%)

Query: 112  PGLQGPIGQKGE---------IGAKGEMGVKGERGEKGAPGVVGPPG------------- 149
            PGL G +G++G          +G KG+ G  GE G  G+PG+ GP G             
Sbjct: 1556 PGLPGKVGERGPRGVPGSRGPVGEKGDPGDPGEDGRNGSPGLSGPKGDRGEPGPPGPAGR 1615

Query: 150  ---------PQGIPGD---EGKRGPKGDMGYPGPQGIPGDEG------------KRGPKG 185
                     PQG PG+   EG RGPKGD G PG  G  G +G             RGP G
Sbjct: 1616 LVSVGLLSLPQGEPGERGQEGPRGPKGDPGLPGASGERGTDGLRGPPGPQGDPGVRGPAG 1675

Query: 186  DMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDGLPG--------------- 227
            + G  G  GLDGR GL   PG PG  G PG  G  G PG+DGLPG               
Sbjct: 1676 EKGDRGPPGLDGRSGLDGKPGAPGPAGQPGAVGKAGEPGRDGLPGLRGEHGPPGPSGPPG 1735

Query: 228  ------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                  +DG PG NG NG+ G  G  G +G+ G +G PG
Sbjct: 1736 ALGKPGEDGTPGLNGKNGQPGDPGEAGRKGEKGESGAPG 1774



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 92/184 (50%), Gaps = 28/184 (15%)

Query: 99   MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------- 151
            ++G      +  PPGL G  G  G+ GA G  G  G  G+ G PG  G PG +       
Sbjct: 1670 VRGPAGEKGDRGPPGLDGRSGLDGKPGAPGPAGQPGAVGKAGEPGRDGLPGLRGEHGPPG 1729

Query: 152  --------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG---RDG 200
                    G PG++G  G  G  G PG    PG+ G++G KG+ G PGR G DG     G
Sbjct: 1730 PSGPPGALGKPGEDGTPGLNGKNGQPG---DPGEAGRKGEKGESGAPGREGHDGPKGERG 1786

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG---KSGING 257
             PG PGL G PG  G  G PG+ G PG   +PG+ G  G++G TG +G +G   + G  G
Sbjct: 1787 APGSPGLQGPPGLPGQVGPPGQ-GFPG---VPGSMGPKGDRGETGSKGQQGLPGERGPRG 1842

Query: 258  VPGT 261
             PG+
Sbjct: 1843 EPGS 1846



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 84/186 (45%), Gaps = 31/186 (16%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG--------- 164
            ++GP G+KG+   +G  G+ G  G  G PG    PGP G PG  GK G  G         
Sbjct: 1670 VRGPAGEKGD---RGPPGLDGRSGLDGKPGA---PGPAGQPGAVGKAGEPGRDGLPGLRG 1723

Query: 165  ------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                         +G PG  G PG  GK G  GD G  GR G  G  G PG  G DG  G
Sbjct: 1724 EHGPPGPSGPPGALGKPGEDGTPGLNGKNGQPGDPGEAGRKGEKGESGAPGREGHDGPKG 1783

Query: 213  RNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
              G  G PG     GLPG+ G PG  G  G  G  GP+G+RG++G  G  G P     + 
Sbjct: 1784 ERGAPGSPGLQGPPGLPGQVGPPG-QGFPGVPGSMGPKGDRGETGSKGQQGLPGERGPRG 1842

Query: 270  ESCSLL 275
            E  S +
Sbjct: 1843 EPGSAV 1848



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 92/211 (43%), Gaps = 67/211 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------------ 154
            GL GP G+KGE G  GE G  GE G+KG PG+ G  G  G+                   
Sbjct: 2231 GLPGPRGEKGEAGRTGEPGDPGEDGQKGVPGLKGHKGDPGVGVQGPPGPTGSPGMKGDTG 2290

Query: 155  -----------GDEGKRGPKGDMGYPGP------QGIPGDE------------------G 179
                       G  G+ GP+G+MG PGP       G+PG E                  G
Sbjct: 2291 PPGSPGAPGTVGLPGQTGPRGEMGQPGPGGERGLAGLPGREGAPGPSGPPGPLGSPGVPG 2350

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGI---PGKDGLPGKDGIPG 233
              G KGD G PG +GL G  G  GEPG+   DG PG+ G  G+   PG  G  GK G  G
Sbjct: 2351 ASGLKGDKGDPG-VGLPGPRGERGEPGVRGEDGHPGQEGPRGLMGPPGSRGDQGKKGDAG 2409

Query: 234  TNGTNGEKGMT-------GPRGNRGKSGING 257
            T G  G+KG +       GPRG +G  G  G
Sbjct: 2410 TAGLKGDKGDSAVIEGPPGPRGAKGDMGERG 2440



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 93/245 (37%), Gaps = 93/245 (37%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--VVGPPGPQGIPGD------------- 156
            P   G  G+KG++G  G  G  G +GE G PG  V G PG +G PGD             
Sbjct: 1455 PAGAGAKGEKGDVGLPGPRGAAGVQGEPGLPGLAVPGDPGSKGDPGDRGPIGLTGRAGPP 1514

Query: 157  --------------------------EGKRGPKGDMGYPGPQGIPGDEGKRGPK------ 184
                                      +G+ G KGD G PG  G+PG  G+RGP+      
Sbjct: 1515 GNSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGLPGDPGLPGKVGERGPRGVPGSR 1574

Query: 185  ---GDMGYPGRIGLDGRDGLPGEPG-------------------------LDGIPGRNGM 216
               G+ G PG  G DGR+G PG  G                           G PG  G 
Sbjct: 1575 GPVGEKGDPGDPGEDGRNGSPGLSGPKGDRGEPGPPGPAGRLVSVGLLSLPQGEPGERGQ 1634

Query: 217  DGIPGKDGLPGKDGIPGTNGTN------------------GEKGMTGPRGNRGKSGINGV 258
            +G  G  G PG  G  G  GT+                  GEKG  GP G  G+SG++G 
Sbjct: 1635 EGPRGPKGDPGLPGASGERGTDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGK 1694

Query: 259  PGTPA 263
            PG P 
Sbjct: 1695 PGAPG 1699



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 86/194 (44%), Gaps = 54/194 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPPGPQ-- 151
            PGL G +G+ G+ GA G  G  G+ G+                  KG  G +GPPG    
Sbjct: 2142 PGLPGQVGETGKPGAPGRDGTNGKDGDRGGPGVPGPPGLPGLVGPKGEAGPMGPPGQVVI 2201

Query: 152  GIPGDEGKRGPKGDM-----GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            G PG +G++G  GD+     G PGP+   GD G  GP+G+ G  GR    G  G PGE G
Sbjct: 2202 GPPGTKGEKGAPGDLAGDLVGEPGPK---GDRGLPGPRGEKGEAGRT---GEPGDPGEDG 2255

Query: 207  LDGIPGRNGMDGIPG-----------KDGLPGKD------------GIPGTNGTNGEKGM 243
              G+PG  G  G PG             G+ G              G+PG  G  GE G 
Sbjct: 2256 QKGVPGLKGHKGDPGVGVQGPPGPTGSPGMKGDTGPPGSPGAPGTVGLPGQTGPRGEMGQ 2315

Query: 244  TGPRGNRGKSGING 257
             GP G RG +G+ G
Sbjct: 2316 PGPGGERGLAGLPG 2329



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 87/209 (41%), Gaps = 50/209 (23%)

Query: 98   AMQGFCNSTKEYCPPGLQGP------------IGQKGEIGAKGEMGVKGERGEKGAPGVV 145
             M G C+   E   PG+ G              G KG++G  G  G+KGERG KGA G+ 
Sbjct: 2470 GMAGLCSPQGEPGAPGMAGDPGTPGKDGAPGFRGDKGDVGFMGPRGIKGERGVKGACGLD 2529

Query: 146  GPPGPQG------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  G +G       PG  G++G  G+ G PG  GIPG EG  GPKGD G+ G+ G  G  
Sbjct: 2530 GEKGDKGEAGLPGRPGLAGRKGEIGEPGMPGQSGIPGKEGLIGPKGDRGFDGQAGPTGDQ 2589

Query: 200  GLPGE------------------------------PGLDGIPGRNGMDGIPGKDGLPGKD 229
            G  GE                               G +G+ G+ G  G PG+  +    
Sbjct: 2590 GEKGERGPPGTGGFPGPRGNDGSSGPPGPPGSVGPKGPEGLQGQKGERGPPGEQVVGAPG 2649

Query: 230  GIPGT--NGTNGEKGMTGPRGNRGKSGIN 256
                    G  G  G  GPRG +G++ + 
Sbjct: 2650 PPGTPGERGEQGRPGPAGPRGEKGEAAMT 2678



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 88/223 (39%), Gaps = 72/223 (32%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGER---------------------------------GEKG 140
            + GP G +G  G+ GE G KGER                                 GEKG
Sbjct: 1383 ITGPKGDRGLTGSPGETGAKGERGLPGPVGPQGPPGLAGHPGARGPEGPPGPAGRRGEKG 1442

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG--------------IPGDEGKRGPKGD 186
             PG  G P     P   G +G KGD+G PGP+G              +PGD G +G  GD
Sbjct: 1443 EPGRPGDPVVV-TPAGAGAKGEKGDVGLPGPRGAAGVQGEPGLPGLAVPGDPGSKGDPGD 1501

Query: 187  MGYPGRIGLDGR---------------------DGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G    IGL GR                      G  G  G DG  G  G +G+PG  GL
Sbjct: 1502 RGP---IGLTGRAGPPGNSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGLPGDPGL 1558

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            PGK G  G  G  G +G  G +G+ G  G +G  G+P +   K
Sbjct: 1559 PGKVGERGPRGVPGSRGPVGEKGDPGDPGEDGRNGSPGLSGPK 1601



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 56/118 (47%), Gaps = 29/118 (24%)

Query: 124  IGAKGEMGVKGERGEKG-----------------------APGVVGPPGPQGIPGDEGKR 160
            +G  GE G KGERGE+G                        PG+    GP G  G +G+ 
Sbjct: 1958 LGNGGERGEKGERGEQGRDGFPGLPGPPGPPGPKVAIDEPGPGLAREQGPPGFKGAKGEP 2017

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            G  GD      QG+ GD G  G KGD G PG+ GLDG  GL GE G+ G  G+ G+ G
Sbjct: 2018 GKDGD------QGLKGDRGVPGVKGDRGEPGQRGLDGSPGLLGERGVAGPEGKPGLQG 2069



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 95/244 (38%), Gaps = 81/244 (33%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDE 157
            GF  +  E    G QG  G +G  G KG+ G  G+RG  G+PG++G     GP+G PG +
Sbjct: 2009 GFKGAKGEPGKDGDQGLKGDRGVPGVKGDRGEPGQRGLDGSPGLLGERGVAGPEGKPGLQ 2068

Query: 158  GKR---------------------------GPKGDMGYPG-------------------- 170
            G R                           GP G  G PG                    
Sbjct: 2069 GPRGAPGPVGGHGDPGPPGAPGLTGPVGPQGPSGLKGEPGETGPPGRGLPGPAGPMGLPG 2128

Query: 171  ---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------------------LPG 203
                     PQG PG  G+ G  G  G PGR G +G+DG                    G
Sbjct: 2129 PPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGTNGKDGDRGGPGVPGPPGLPGLVGPKG 2188

Query: 204  EPGLDGIPGRN--GMDGIPGKDGLPG--KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            E G  G PG+   G  G  G+ G PG     + G  G  G++G+ GPRG +G++G  G P
Sbjct: 2189 EAGPMGPPGQVVIGPPGTKGEKGAPGDLAGDLVGEPGPKGDRGLPGPRGEKGEAGRTGEP 2248

Query: 260  GTPA 263
            G P 
Sbjct: 2249 GDPG 2252



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 81/190 (42%), Gaps = 62/190 (32%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER--------------------------------GEK 139
            PG QGP G++G IG  GE G+KG+R                                GE 
Sbjct: 1892 PGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKREGEP 1951

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGY---------------------PGPQGIPGDE 178
            GA G VG     G  G+ G++G +G+ G                      PGP G+  ++
Sbjct: 1952 GA-GWVG----LGNGGERGEKGERGEQGRDGFPGLPGPPGPPGPKVAIDEPGP-GLAREQ 2005

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  G KG  G PG+   DG  GL G+ G+ G+ G  G  G  G DG PG  G  G  G  
Sbjct: 2006 GPPGFKGAKGEPGK---DGDQGLKGDRGVPGVKGDRGEPGQRGLDGSPGLLGERGVAGPE 2062

Query: 239  GEKGMTGPRG 248
            G+ G+ GPRG
Sbjct: 2063 GKPGLQGPRG 2072



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 79/220 (35%), Gaps = 100/220 (45%)

Query: 131  GVKGERGEKGAPGVVGPPGPQ--------------------------------------- 151
            G KG+RG  G+PG  G  G +                                       
Sbjct: 1385 GPKGDRGLTGSPGETGAKGERGLPGPVGPQGPPGLAGHPGARGPEGPPGPAGRRGEKGEP 1444

Query: 152  GIPGD--------EGKRGPKGDMGYPGPQG--------------IPGDEGKRGPKGDMG- 188
            G PGD         G +G KGD+G PGP+G              +PGD G +G  GD G 
Sbjct: 1445 GRPGDPVVVTPAGAGAKGEKGDVGLPGPRGAAGVQGEPGLPGLAVPGDPGSKGDPGDRGP 1504

Query: 189  -----------------------------------YPGRIGLDGRDGLPGEPGLDGIPGR 213
                                                 G +G  G +GLPG+PGL G  G 
Sbjct: 1505 IGLTGRAGPPGNSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGLPGDPGLPGKVGE 1564

Query: 214  NGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGPRGNR 250
             G  G+PG  G  G+    G PG +G NG  G++GP+G+R
Sbjct: 1565 RGPRGVPGSRGPVGEKGDPGDPGEDGRNGSPGLSGPKGDR 1604



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 78/175 (44%), Gaps = 50/175 (28%)

Query: 112  PGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL   QGP G KG   AKGE G  G++G KG  GV   PG +G  G+ G+RG  G  G 
Sbjct: 1999 PGLAREQGPPGFKG---AKGEPGKDGDQGLKGDRGV---PGVKGDRGEPGQRGLDGSPGL 2052

Query: 169  PGPQGIPGDEGKRGPKGDMGY------------------PGRIGLDGRDGLPGEPG---- 206
             G +G+ G EGK G +G  G                    G +G  G  GL GEPG    
Sbjct: 2053 LGERGVAGPEGKPGLQGPRGAPGPVGGHGDPGPPGAPGLTGPVGPQGPSGLKGEPGETGP 2112

Query: 207  -------------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                                 G+ G  G  G+PG+ G  GK G PG +GTNG+ G
Sbjct: 2113 PGRGLPGPAGPMGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGTNGKDG 2167


>gi|351694807|gb|EHA97725.1| Macrophage receptor MARCO [Heterocephalus glaber]
          Length = 506

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/167 (45%), Positives = 92/167 (55%), Gaps = 18/167 (10%)

Query: 116 GPIGQKGEIGAKGEMG------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GPIG KGE GAKG+ G       KG+ G +G  G  GPPGPQG  GD GK GP G  G+P
Sbjct: 222 GPIGPKGEAGAKGDKGDLGHPGSKGDMGMRGDMGATGPPGPQGNKGDSGKPGPPGMAGFP 281

Query: 170 GPQG------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G +G             PG  G  G +G+ G PG +GL G  G PG PG +G+ G  G  
Sbjct: 282 GAKGNQGQPGVPGVPGPPGPAGPLGARGERGIPGTVGLTGAPGNPGSPGREGMKGSKGDT 341

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           GI G+ G  G+ G+PG+ G  GEKG  GP G RG  G+ G  G P +
Sbjct: 342 GIQGQKGTKGESGVPGSAGPKGEKGTLGPVGLRGAPGVVGPKGDPGV 388



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 101/242 (41%), Gaps = 70/242 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------GDM 166
           G  GP G  G  G  GE G KG  G  G+PG++GP GP G+ G+ G +GPK      G  
Sbjct: 147 GAPGPKGAPGVPGHPGEKGAKGAMGLDGSPGLLGPQGPAGMKGNPGLQGPKGMPGEQGAA 206

Query: 167 GYPGPQGIPGDEGKRGP------------KGDMGYPGR------------------IGLD 196
           G PGPQG  G +G  GP            KGD+G+PG                    G  
Sbjct: 207 GTPGPQGEKGSKGDGGPIGPKGEAGAKGDKGDLGHPGSKGDMGMRGDMGATGPPGPQGNK 266

Query: 197 GRDGLPGEPGLDGIPGRN------------------------GMDGIPGKDGL---PGKD 229
           G  G PG PG+ G PG                          G  GIPG  GL   PG  
Sbjct: 267 GDSGKPGPPGMAGFPGAKGNQGQPGVPGVPGPPGPAGPLGARGERGIPGTVGLTGAPGNP 326

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTI 289
           G PG  G  G KG TG +G +G  G +GVPG+      K E  +L P      L   P +
Sbjct: 327 GSPGREGMKGSKGDTGIQGQKGTKGESGVPGS---AGPKGEKGTLGPVG----LRGAPGV 379

Query: 290 VG 291
           VG
Sbjct: 380 VG 381



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 70/148 (47%), Gaps = 26/148 (17%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +GE+GAPG   P G  G+PG  G++G KG MG  G  G+       GP+G  G  G  GL
Sbjct: 143 KGERGAPG---PKGAPGVPGHPGEKGAKGAMGLDGSPGL------LGPQGPAGMKGNPGL 193

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP----------------GKDGIPGTNGTNG 239
            G  G+PGE G  G PG  G  G  G DG P                G  G  G  G  G
Sbjct: 194 QGPKGMPGEQGAAGTPGPQGEKGSKG-DGGPIGPKGEAGAKGDKGDLGHPGSKGDMGMRG 252

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICAY 267
           + G TGP G +G  G +G PG P +  +
Sbjct: 253 DMGATGPPGPQGNKGDSGKPGPPGMAGF 280



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 38/88 (43%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G  G  G PG+ G PG  G  G  G DG PG  G  G  G  G  G+ GP+G  G+ 
Sbjct: 144 GERGAPGPKGAPGVPGHPGEKGAKGAMGLDGSPGLLGPQGPAGMKGNPGLQGPKGMPGEQ 203

Query: 254 GINGVPGTPAICAYKRESCSLLPNSETS 281
           G  G PG       K +   + P  E  
Sbjct: 204 GAAGTPGPQGEKGSKGDGGPIGPKGEAG 231



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 59/123 (47%), Gaps = 15/123 (12%)

Query: 112 PGLQGP------IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG +G        G  G  G  G +G +GERG  G  G+ G PG  G PG EG +G KGD
Sbjct: 281 PGAKGNQGQPGVPGVPGPPGPAGPLGARGERGIPGTVGLTGAPGNPGSPGREGMKGSKGD 340

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G          +G++G KG+ G PG  G  G  G  G  GL G PG  G  G PG  G 
Sbjct: 341 TGI---------QGQKGTKGESGVPGSAGPKGEKGTLGPVGLRGAPGVVGPKGDPGVKGS 391

Query: 226 PGK 228
            G+
Sbjct: 392 SGQ 394


>gi|345778919|ref|XP_532180.3| PREDICTED: collagen alpha-1(XXI) chain [Canis lupus familiaris]
          Length = 957

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 87/152 (57%), Gaps = 3/152 (1%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG +GQKGEIG  G +G KG  G  G  G  G PG  G PG +G +G  G  G PG 
Sbjct: 610 PGNQGLMGQKGEIGPPGPLGKKGAPGIPGLMGRDGSPGQPGTPGSKGNKGEPGLQGMPGA 669

Query: 172 QGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G+ G++G  GP G+ GY   PG  G  G  G  GE G+ G  G NG  GIPG+ G+ G 
Sbjct: 670 SGLKGEQGAVGPPGEPGYLGLPGIQGKKGDKGSQGEKGIQGQKGENGRQGIPGQQGIQGH 729

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G  G  GE G+ G  G +G+SG++G+ G
Sbjct: 730 HGMKGERGEKGEPGVRGATGPKGESGVDGLMG 761



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 82/155 (52%), Gaps = 3/155 (1%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  G KGE+G  G  G  G RGE G PG    PG QG+ G +G+ GP G +G  G  
Sbjct: 578 GLMGSPGYKGEVGPPGAPGQDGSRGEPGIPGF---PGNQGLMGQKGEIGPPGPLGKKGAP 634

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           GIPG  G+ G  G  G PG  G  G  GL G PG  G+ G  G  G PG+ G  G  GI 
Sbjct: 635 GIPGLMGRDGSPGQPGTPGSKGNKGEPGLQGMPGASGLKGEQGAVGPPGEPGYLGLPGIQ 694

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           G  G  G +G  G +G +G++G  G+PG   I  +
Sbjct: 695 GKKGDKGSQGEKGIQGQKGENGRQGIPGQQGIQGH 729



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 98/193 (50%), Gaps = 42/193 (21%)

Query: 110 CPPG---LQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGPPGPQGI------- 153
           CPPG   LQGP G+ G+ G  G  G  G+ G+       G+PGV G PG QG+       
Sbjct: 446 CPPGKPGLQGPKGEPGQPGNPGYPGQSGQDGKPGYQGIAGSPGVPGSPGIQGVQGLPGYK 505

Query: 154 --PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG------RIGLDGRDGLPGEP 205
             PG +G++G +G  G+PG  GIPG +G+ GPKGD G  G        G  G  G PG P
Sbjct: 506 GEPGRDGEKGDRGLPGFPGLHGIPGLKGEMGPKGDKGSTGFYGKKGAKGEKGNSGFPGLP 565

Query: 206 GLDGIPGRNGMDGI---------------PGKDGL---PGKDGIPGTNGTNGEKGMTGPR 247
           G  G PGR+G DG+               PG+DG    PG  G PG  G  G+KG  GP 
Sbjct: 566 GRAGEPGRHGKDGLMGSPGYKGEVGPPGAPGQDGSRGEPGIPGFPGNQGLMGQKGEIGPP 625

Query: 248 GNRGKSGINGVPG 260
           G  GK G  G+PG
Sbjct: 626 GPLGKKGAPGIPG 638



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 105/220 (47%), Gaps = 42/220 (19%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   S      PG+QG    +G  G KGE G  GE+G++G PG    PG  GIPG +G+
Sbjct: 481 QGIAGSPGVPGSPGIQG---VQGLPGYKGEPGRDGEKGDRGLPGF---PGLHGIPGLKGE 534

Query: 160 RGPKGDM---------------------GYPGPQGIPGDEGKRGPKGDMGYPGRI---GL 195
            GPKGD                      G PG  G PG  GK G  G  GY G +   G 
Sbjct: 535 MGPKGDKGSTGFYGKKGAKGEKGNSGFPGLPGRAGEPGRHGKDGLMGSPGYKGEVGPPGA 594

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIP---------GKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G+DG  GEPG+ G PG  G+ G           GK G PG  G+ G +G+ G+ G  G 
Sbjct: 595 PGQDGSRGEPGIPGFPGNQGLMGQKGEIGPPGPLGKKGAPGIPGLMGRDGSPGQPGTPGS 654

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           +GN+G+ G+ G+PG   +   K E  ++ P  E   L +P
Sbjct: 655 KGNKGEPGLQGMPGASGL---KGEQGAVGPPGEPGYLGLP 691



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 103/213 (48%), Gaps = 18/213 (8%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGD 156
           QG      E  PPG   P+G+KG  G  G MG  G  G+ G PG  G    PG QG+PG 
Sbjct: 613 QGLMGQKGEIGPPG---PLGKKGAPGIPGLMGRDGSPGQPGTPGSKGNKGEPGLQGMPGA 669

Query: 157 EGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G +G +G +G PG     G+PG +GK+G KG  G  G  G  G +G  G PG  GI G 
Sbjct: 670 SGLKGEQGAVGPPGEPGYLGLPGIQGKKGDKGSQGEKGIQGQKGENGRQGIPGQQGIQGH 729

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA------- 266
           +GM G  G+ G PG  G  G  G +G  G+ GP G +G+ G  G  G P +         
Sbjct: 730 HGMKGERGEKGEPGVRGATGPKGESGVDGLMGPVGPQGQPGEAGPQGPPGLDGKPGREFS 789

Query: 267 --YKRESCSLLPNSETSQLLIPPTIVGSEHIFS 297
             + R+ C+ +  ++   LL    I   +H  S
Sbjct: 790 EQFIRQVCTDVLRAQLPVLLQSGRIQSCDHCQS 822



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 80/149 (53%), Gaps = 15/149 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G+ G  G  G MG  G +GE      VGPPG    PG +G RG       PG 
Sbjct: 562 PGLPGRAGEPGRHGKDGLMGSPGYKGE------VGPPG---APGQDGSRG------EPGI 606

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G PG++G  G KG++G PG +G  G  G+PG  G DG PG+ G  G  G  G PG  G+
Sbjct: 607 PGFPGNQGLMGQKGEIGPPGPLGKKGAPGIPGLMGRDGSPGQPGTPGSKGNKGEPGLQGM 666

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG +G  GE+G  GP G  G  G+ G+ G
Sbjct: 667 PGASGLKGEQGAVGPPGEPGYLGLPGIQG 695



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 72/165 (43%), Gaps = 45/165 (27%)

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQ---------------GIPGDEGKRGPKGDMGY 189
           V PPG  G+ G +G+ G  G+ GYPG                 G+PG  G +G +G  GY
Sbjct: 445 VCPPGKPGLQGPKGEPGQPGNPGYPGQSGQDGKPGYQGIAGSPGVPGSPGIQGVQGLPGY 504

Query: 190 ---PGRIGLDGRDGLPGEPGLDGIPG---------------------------RNGMDGI 219
              PGR G  G  GLPG PGL GIPG                            +G  G+
Sbjct: 505 KGEPGRDGEKGDRGLPGFPGLHGIPGLKGEMGPKGDKGSTGFYGKKGAKGEKGNSGFPGL 564

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PG+ G PG+ G  G  G+ G KG  GP G  G+ G  G PG P  
Sbjct: 565 PGRAGEPGRHGKDGLMGSPGYKGEVGPPGAPGQDGSRGEPGIPGF 609


>gi|41688514|sp|Q9JMH4.1|COHA1_MESAU RecName: Full=Collagen alpha-1(XVII) chain; AltName: Full=180 kDa
           bullous pemphigoid antigen 2; AltName: Full=Bullous
           pemphigoid antigen 2; Contains: RecName: Full=120 kDa
           linear IgA disease antigen homolog
 gi|7592668|dbj|BAA94381.1| collagen type XVII [Mesocricetus auratus]
          Length = 1431

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 96/185 (51%), Gaps = 35/185 (18%)

Query: 112 PGLQGPIGQKG--------------EIGAKGEMGVKGERGEKGAPGVVGPPGP------- 150
           PG++GPIGQ+G                G KG+ G+ GE+G +G PGV G  GP       
Sbjct: 617 PGMEGPIGQRGLEGPMGPRGEPGPPGSGEKGDRGIAGEQGPRGLPGVPGSVGPRGPNGSP 676

Query: 151 -----------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                      QG+ G+ G  G KGD G  GP G  GD+G++GP+G  G PG  GL G  
Sbjct: 677 GPQGPPGSTGPQGLRGEVGLPGVKGDKGLAGPPGPKGDQGEKGPRGLTGEPGVRGLPGAV 736

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G PG  G  G  G +G  G  G+ GL   PG  G+PG +G  G+ G+TGP+G +G  G  
Sbjct: 737 GEPGAKGAMGPAGPDGQQGPRGEQGLTGMPGTRGLPGPSGDPGKPGVTGPQGPQGLPGSP 796

Query: 257 GVPGT 261
           G PGT
Sbjct: 797 GRPGT 801



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 87/203 (42%), Gaps = 59/203 (29%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP----------- 169
           +G  G KG+MG +G +G++G PG  G PGP G PG EG +G KG +G P           
Sbjct: 569 RGNPGPKGDMGSQGPKGDRGLPGTAGIPGPLGHPGPEGPKGQKGSIGDPGMEGPIGQRGL 628

Query: 170 ---------------------------GPQGIPGDEGKRGP------------------- 183
                                      GP+G+PG  G  GP                   
Sbjct: 629 EGPMGPRGEPGPPGSGEKGDRGIAGEQGPRGLPGVPGSVGPRGPNGSPGPQGPPGSTGPQ 688

Query: 184 --KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
             +G++G PG  G  G  G PG  G  G  G  G+ G PG  GLPG  G PG  G  G  
Sbjct: 689 GLRGEVGLPGVKGDKGLAGPPGPKGDQGEKGPRGLTGEPGVRGLPGAVGEPGAKGAMGPA 748

Query: 242 GMTGPRGNRGKSGINGVPGTPAI 264
           G  G +G RG+ G+ G+PGT  +
Sbjct: 749 GPDGQQGPRGEQGLTGMPGTRGL 771



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/142 (43%), Positives = 80/142 (56%), Gaps = 21/142 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +GE+G     GVKG++      G+ GPPGP+   GD+G++GP+G  G PG +G+PG  
Sbjct: 689 GLRGEVGLP---GVKGDK------GLAGPPGPK---GDQGEKGPRGLTGEPGVRGLPGAV 736

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G+ G KG M   G  G DG+ G  GE GL G+PG  G+   PG  G PGK   PG  G  
Sbjct: 737 GEPGAKGAM---GPAGPDGQQGPRGEQGLTGMPGTRGL---PGPSGDPGK---PGVTGPQ 787

Query: 239 GEKGMTGPRGNRGKSGINGVPG 260
           G +G+ G  G  G  G  G PG
Sbjct: 788 GPQGLPGSPGRPGTKGEPGAPG 809



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 12/96 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G   +  E    G  GP G  G+ G +GE G+ G  G +G PG  G PG  G+ G +
Sbjct: 728 GVRGLPGAVGEPGAKGAMGPAGPDGQQGPRGEQGLTGMPGTRGLPGPSGDPGKPGVTGPQ 787

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
                       GPQG+PG  G+ G KG+ G PGR+
Sbjct: 788 ------------GPQGLPGSPGRPGTKGEPGAPGRV 811


>gi|426353686|ref|XP_004044316.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(IX) chain [Gorilla
           gorilla gorilla]
          Length = 871

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 106/189 (56%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGI---PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+   PGD+G+R      GPKGD G  G +GIPG     GPKGD G P 
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP---GPKGDTGLP- 540

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G+DGRDG+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G
Sbjct: 541 --GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 599 QMGNSGKPG 607



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA G+ G P            GPKGD G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GP+   G+RG+ G  G PG P 
Sbjct: 599 QMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 640



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 73/140 (52%), Gaps = 6/140 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 185 GDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GD G  G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDT 537

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G+    G  G+ GI G+PGT
Sbjct: 538 GLP---GVDGRDGIPGMPGT 554



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 63/120 (52%), Gaps = 6/120 (5%)

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           PPG  G PG  G RG KG  G     G PG +G +G +GD G  G +G  G  G  G  G
Sbjct: 416 PPGRSGYPGLPGMRGHKGAKGE---IGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRG 472

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           + GI G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 473 ITGIVGDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 532



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GPQ
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 621

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PG+
Sbjct: 622 GLPGSRGELGPVGSPGLPGK 641



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 57/114 (50%), Gaps = 21/114 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGPQGIPGD 156
           PGL GP G  G  G  G  G+ G               + G +G PGV G PG +G+ G+
Sbjct: 528 PGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGE 587

Query: 157 EG------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           +G      K G  G+ G PG QG PG+ G RGP+G  G  G +G  G  GLPG+
Sbjct: 588 KGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGK 641



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G++G+RGP  +G  G PG  G+PGD G       
Sbjct: 752 QMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAIGLPGDPG------- 804

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 805 ---PASYGRNGRDGERGPPGV 822



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 18/84 (21%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG +G PG  G RGPKGD+G               E G  G PGR G  G+PG  
Sbjct: 754 GIRGLPGIKGPPGALGLRGPKGDLG---------------EKGERGPPGR-GPKGLPGAI 797

Query: 224 GLPGKDGIP--GTNGTNGEKGMTG 245
           GLPG  G    G NG +GE+G  G
Sbjct: 798 GLPGDPGPASYGRNGRDGERGPPG 821


>gi|428186449|gb|EKX55299.1| hypothetical protein GUITHDRAFT_131533 [Guillardia theta CCMP2712]
          Length = 430

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 31/188 (16%)

Query: 85  WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
           W W    + +P +++ G         P G+ G  G +G  G KG  G +G RG  G   V
Sbjct: 203 WQWERDPTGLPDLSLPG---------PQGISGVPGLEGRRGRKGPTGARGHRGPAGKT-V 252

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---------RGPKGDMGYPGRIGL 195
           +GP GP      EG  GP   MG+ GP G+PG  G          RGP+G+MGYPG+ G+
Sbjct: 253 IGPRGP------EGHMGP---MGFQGPSGMPGLRGPPGKEGHVGLRGPRGNMGYPGQPGI 303

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
               G+PG  G+ G+PG+ GMDGI G+ G+PG  G+ GT G  G  G++GP G  G +G 
Sbjct: 304 ---QGIPGRRGIPGMPGQRGMDGIVGEHGMPGPPGVAGTVGIQGNNGLSGPMGIIGTAGA 360

Query: 256 NGVPGTPA 263
            GV G+P 
Sbjct: 361 TGVTGSPG 368



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 84/182 (46%), Gaps = 13/182 (7%)

Query: 41  DKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAM- 99
           ++D   + D S+P    +  VP    E  R R+       H  P        R P   M 
Sbjct: 206 ERDPTGLPDLSLPGPQGISGVPG--LEGRRGRKGPTGARGHRGPAGKTVIGPRGPEGHMG 263

Query: 100 -QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
             GF   +     PGL+GP G++G +G +G    +G  G  G PG+ G PG +GIPG  G
Sbjct: 264 PMGFQGPSGM---PGLRGPPGKEGHVGLRGP---RGNMGYPGQPGIQGIPGRRGIPGMPG 317

Query: 159 KRGPK---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           +RG     G+ G PGP G+ G  G +G  G  G  G IG  G  G+ G PG  G  G  G
Sbjct: 318 QRGMDGIVGEHGMPGPPGVAGTVGIQGNNGLSGPMGIIGTAGATGVTGSPGQPGTAGARG 377

Query: 216 MD 217
           +D
Sbjct: 378 VD 379


>gi|307213363|gb|EFN88815.1| Structural maintenance of chromosomes protein 1A [Harpegnathos
            saltator]
          Length = 2587

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 83/150 (55%), Gaps = 12/150 (8%)

Query: 111  PPGLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            PPG+ G IGQ G  G        G  G+ GERG KG  G      PQG+ G +G RG  G
Sbjct: 2162 PPGIPGAIGQSGPPGLPGSPGQAGHTGLPGERGSKGEAG------PQGVEGQQGPRGKAG 2215

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
              G  G +G  G+EG++G KG  G+ G  GL G  GLPGE G+ G+PG  G DG PG  G
Sbjct: 2216 PPGLEGAKGDHGEEGQKGAKGHRGFNGLQGLPGSPGLPGEKGMPGLPGLPGKDGEPGIRG 2275

Query: 225  LPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             PG++G PG  G  G  G+ GP G  G+ G
Sbjct: 2276 SPGREGSPGPIGLIGNPGLRGPPGEEGRHG 2305



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 89/166 (53%), Gaps = 15/166 (9%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GLQG  G +G  G +G +G+ G +G++G PG+ G  G  G+PG  G+ GP+G  G  G +
Sbjct: 1930 GLQGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGSSGLPGSPGEVGPQGLTGLTGTK 1989

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG-------- 224
            GI G+ G RG  G MG PG  G  G  G PG  G  G+PG +G+ G  G  G        
Sbjct: 1990 GIRGEPGARGEPGLMGPPGVTGQVGPAGPPGNVGSPGVPGTSGIKGNAGDVGRQGFPGPI 2049

Query: 225  -------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                   + G  G  G+ G +G  G+ GP+G  G+ G+ G+PG+P 
Sbjct: 2050 GNPGPPGIDGNKGESGSPGPSGPAGLQGPQGTPGERGLPGLPGSPG 2095



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 90/212 (42%), Gaps = 51/212 (24%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---- 155
            QG          PG  GPIGQ G  G +GE G +G  G  G  GV G  GP G PG    
Sbjct: 1406 QGTTGEKGSMGAPGPMGPIGQIGPAGPRGERGREGPSGPPGMRGVDGISGPPGQPGAVGK 1465

Query: 156  --------------DEGKRGPKGDMGYPGPQG------IPGDEGKRGPKGDMGYPGRIGL 195
                          D+G +GPKG  G  GP+G       PG+ G +GP+G  G PG  G+
Sbjct: 1466 SGPPGFPGSPGAKGDQGAQGPKGSQGLQGPRGESGRPGQPGETGSQGPQGKDGVPGEKGM 1525

Query: 196  D------------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG---------- 233
                         G  G PG  G  G+PG  G+ G+PG+ G  G  G+ G          
Sbjct: 1526 AGAAGPAGVPGFPGTRGQPGIAGNPGVPGAKGIPGLPGERGFKGDAGVKGDSGVPGPRGL 1585

Query: 234  -----TNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   G  G++GM GP G  G  G  G+PG
Sbjct: 1586 PGPPGNEGKRGKRGMRGPVGAAGPPGERGLPG 1617



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 84/191 (43%), Gaps = 42/191 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
            G +G  G +G +GA G  G +G  G +G PG  GP GPQG PGD G              
Sbjct: 1593 GKRGKRGMRGPVGAAGPPGERGLPGIRGLPGPDGPIGPQGQPGDRGSVGSIGPKGATGDP 1652

Query: 160  --------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                    +G +G MG PG  G PG+ G+RG +   G  G+ G  G  GL G PG  G P
Sbjct: 1653 GRPGPPGLQGARGLMGRPGAPGKPGNPGERGIQ---GADGKSGEQGSPGLQGLPGPLGAP 1709

Query: 212  GRNGMDGIPGKD------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G  G  G PGKD                  G PG  G PG  G  G +G  G  G RG  
Sbjct: 1710 GERGYPGEPGKDGEAGNPGPPGPRGDAGKEGPPGMQGAPGPTGNTGARGSPGSSGTRGFQ 1769

Query: 254  GINGVPGTPAI 264
            G+ G  G P I
Sbjct: 1770 GLPGAAGNPGI 1780



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 88/209 (42%), Gaps = 60/209 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPP-------------------- 148
            PG  GPIG +G  GA GE G  G+    G  G  G+VGPP                    
Sbjct: 2091 PGSPGPIGNRGLRGAPGETGQPGKPGSEGPSGPSGLVGPPGLPGHIGETGPEGPVGKPGP 2150

Query: 149  ----------GPQGIPGDEGKR------------------GPKGDMGYPGPQGIPGDEGK 180
                      GP GIPG  G+                   G +G  G  GPQG+ G +G 
Sbjct: 2151 PGISGRPGDKGPPGIPGAIGQSGPPGLPGSPGQAGHTGLPGERGSKGEAGPQGVEGQQGP 2210

Query: 181  R---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            R         G KGD G  G+ G  G  G  G  GL G PG  G  G+PG  GLPGKDG 
Sbjct: 2211 RGKAGPPGLEGAKGDHGEEGQKGAKGHRGFNGLQGLPGSPGLPGEKGMPGLPGLPGKDGE 2270

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG  G+ G +G  GP G  G  G+ G PG
Sbjct: 2271 PGIRGSPGREGSPGPIGLIGNPGLRGPPG 2299



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 89/175 (50%), Gaps = 21/175 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G +G  G  G  G++GE G +G PG++GPP   G+ G  G  GP G++G P  
Sbjct: 1971 PGSPGEVGPQGLTGLTGTKGIRGEPGARGEPGLMGPP---GVTGQVGPAGPPGNVGSP-- 2025

Query: 172  QGIPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G+PG  G +G  GD+G          PG  G+DG  G  G PG  G  G  G  G PG+
Sbjct: 2026 -GVPGTSGIKGNAGDVGRQGFPGPIGNPGPPGIDGNKGESGSPGPSGPAGLQGPQGTPGE 2084

Query: 223  DGLPGKDGIP------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             GLPG  G P      G  G  GE G  G  G+ G SG +G+ G P +  +  E+
Sbjct: 2085 RGLPGLPGSPGPIGNRGLRGAPGETGQPGKPGSEGPSGPSGLVGPPGLPGHIGET 2139



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 70/149 (46%), Gaps = 24/149 (16%)

Query: 137  GEKGAPGVVGPPGPQGIP---------------------GDEGKRGPKGDMGYPGPQGIP 175
            GE+G  G VGP GP G P                     G+ G +G +G  G+PGPQG+ 
Sbjct: 1888 GERGPQGEVGPSGPPGEPAERGDPGPPGPTGEPGAPGNPGERGLQGLQGSQGFPGPQGLI 1947

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            G  G    KGD GYPG  G  G  GLPG PG  G  G  G+ G  G  G PG  G PG  
Sbjct: 1948 GLPGL---KGDRGYPGLKGEQGSSGLPGSPGEVGPQGLTGLTGTKGIRGEPGARGEPGLM 2004

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G  GP G  G  G  GVPGT  I
Sbjct: 2005 GPPGVTGQVGPAGPPGNVGSPGVPGTSGI 2033



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 90/221 (40%), Gaps = 69/221 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEM---------------GVKGERGEKGAPGVVGPPGPQGIPGD 156
            PGL G  G KG+ G KG+                G +G+RG +G  G  GPPG +G+PG 
Sbjct: 1559 PGLPGERGFKGDAGVKGDSGVPGPRGLPGPPGNEGKRGKRGMRGPVGAAGPPGERGLPGI 1618

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRG---PKGDM---------------GYPGRIGLDGR 198
             G  GP G +G   PQG PGD G  G   PKG                 G  GR G  G+
Sbjct: 1619 RGLPGPDGPIG---PQGQPGDRGSVGSIGPKGATGDPGRPGPPGLQGARGLMGRPGAPGK 1675

Query: 199  DGLPGEPGLDGIPGRNGMDGIPGKDGLPG------------------------------- 227
             G PGE G+ G  G++G  G PG  GLPG                               
Sbjct: 1676 PGNPGERGIQGADGKSGEQGSPGLQGLPGPLGAPGERGYPGEPGKDGEAGNPGPPGPRGD 1735

Query: 228  --KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
              K+G PG  G  G  G TG RG+ G SG  G  G P    
Sbjct: 1736 AGKEGPPGMQGAPGPTGNTGARGSPGSSGTRGFQGLPGAAG 1776



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 81/173 (46%), Gaps = 21/173 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGD 165
            PG QG IG  G  G +G  G+KGE+G  G PG  G  GPQG+ G  G +G       +G+
Sbjct: 1941 PGPQGLIGLPGLKGDRGYPGLKGEQGSSGLPGSPGEVGPQGLTGLTGTKGIRGEPGARGE 2000

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------LDGI 210
             G  GP G+ G  G  GP G++G PG  G  G  G  G+ G               +DG 
Sbjct: 2001 PGLMGPPGVTGQVGPAGPPGNVGSPGVPGTSGIKGNAGDVGRQGFPGPIGNPGPPGIDGN 2060

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G +G  G  G  GL G  G PG  G  G  G  GP GNRG  G  G  G P 
Sbjct: 2061 KGESGSPGPSGPAGLQGPQGTPGERGLPGLPGSPGPIGNRGLRGAPGETGQPG 2113



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 91/234 (38%), Gaps = 87/234 (37%)

Query: 111  PPGLQGP------------IGQKGEI---------------------------------G 125
            PPG+ GP             G+ GE                                  G
Sbjct: 1342 PPGVSGPRGLPGLPGKDGVSGEDGETGPPGSPGPVGPRGLPGMPGLTGMKGHRGFPGLDG 1401

Query: 126  AKGEMGVKGERGEKGAP------GVVGPPGPQGIPGDEGKRGP---KGDMGYPGPQGIP- 175
            AKGE G  GE+G  GAP      G +GP GP+G  G EG  GP   +G  G  GP G P 
Sbjct: 1402 AKGEQGTTGEKGSMGAPGPMGPIGQIGPAGPRGERGREGPSGPPGMRGVDGISGPPGQPG 1461

Query: 176  -----------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPG 212
                             GD+G +GPKG  G  G  G  GR G PGE       G DG+PG
Sbjct: 1462 AVGKSGPPGFPGSPGAKGDQGAQGPKGSQGLQGPRGESGRPGQPGETGSQGPQGKDGVPG 1521

Query: 213  RNGM---------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GM          G PG  G PG  G PG  G  G  G+ G RG +G +G+ G
Sbjct: 1522 EKGMAGAAGPAGVPGFPGTRGQPGIAGNPGVPGAKGIPGLPGERGFKGDAGVKG 1575



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 86/215 (40%), Gaps = 66/215 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVGPPGP 150
            PG  GPIG +G+ G +G +G                      +G  G  GAPG  G PG 
Sbjct: 1622 PGPDGPIGPQGQPGDRGSVGSIGPKGATGDPGRPGPPGLQGARGLMGRPGAPGKPGNPGE 1681

Query: 151  QGIPGDEGKRGPKGD---MGYPGPQGIPGDEG------------------------KRGP 183
            +GI G +GK G +G     G PGP G PG+ G                        K GP
Sbjct: 1682 RGIQGADGKSGEQGSPGLQGLPGPLGAPGERGYPGEPGKDGEAGNPGPPGPRGDAGKEGP 1741

Query: 184  KGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGMDGIPGKDGLP-------------- 226
             G  G PG  G  G  G PG     G  G+PG  G  GIPGKDG                
Sbjct: 1742 PGMQGAPGPTGNTGARGSPGSSGTRGFQGLPGAAGNPGIPGKDGEAGVQGPPGLPGPVGN 1801

Query: 227  -GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G PG  G  G+ G  G RG  G  G +G+ G
Sbjct: 1802 RGERGPPGERGPMGQPGPMGLRGETGAQGADGLTG 1836



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 82/178 (46%), Gaps = 30/178 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------------GPQGIP 154
            G  G  G  G  GAKG  G+ GERG KG  GV G                    G +G+ 
Sbjct: 1542 GQPGIAGNPGVPGAKGIPGLPGERGFKGDAGVKGDSGVPGPRGLPGPPGNEGKRGKRGMR 1601

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------------LP 202
            G  G  GP G+ G PG +G+PG +G  GP+G  G  G +G  G  G            L 
Sbjct: 1602 GPVGAAGPPGERGLPGIRGLPGPDGPIGPQGQPGDRGSVGSIGPKGATGDPGRPGPPGLQ 1661

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  GL G PG  G  G PG+ G+ G DG  G  G+ G +G+ GP G  G+ G  G PG
Sbjct: 1662 GARGLMGRPGAPGKPGNPGERGIQGADGKSGEQGSPGLQGLPGPLGAPGERGYPGEPG 1719



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 94/254 (37%), Gaps = 81/254 (31%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------------------VKGERG 137
            L+   G         PPG  G  G  G  G KG  G                  + G +G
Sbjct: 2003 LMGPPGVTGQVGPAGPPGNVGSPGVPGTSGIKGNAGDVGRQGFPGPIGNPGPPGIDGNKG 2062

Query: 138  EKGAPGVVGPPG---PQGIPGDE------------------------------GKRGPKG 164
            E G+PG  GP G   PQG PG+                               G  GP G
Sbjct: 2063 ESGSPGPSGPAGLQGPQGTPGERGLPGLPGSPGPIGNRGLRGAPGETGQPGKPGSEGPSG 2122

Query: 165  DMGYPGPQGIPGD------------------EGKRGPKGDMGYPGRIGLD---------- 196
              G  GP G+PG                    G+ G KG  G PG IG            
Sbjct: 2123 PSGLVGPPGLPGHIGETGPEGPVGKPGPPGISGRPGDKGPPGIPGAIGQSGPPGLPGSPG 2182

Query: 197  --GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              G  GLPGE G  G  G  G++G  G  G  G  G+ G  G +GE+G  G +G+RG +G
Sbjct: 2183 QAGHTGLPGERGSKGEAGPQGVEGQQGPRGKAGPPGLEGAKGDHGEEGQKGAKGHRGFNG 2242

Query: 255  INGVPGTPAICAYK 268
            + G+PG+P +   K
Sbjct: 2243 LQGLPGSPGLPGEK 2256



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 80/186 (43%), Gaps = 45/186 (24%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK-------------- 159
             QG  G+ GE G  G  GV G RG    PG+   PG  G+ G++G+              
Sbjct: 1327 FQGTRGEPGESGTSGPPGVSGPRG---LPGL---PGKDGVSGEDGETGPPGSPGPVGPRG 1380

Query: 160  -------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP------GRIGLDGRDGLPGEPG 206
                    G KG  G+PG  G  G++G  G KG MG P      G+IG  G  G  G  G
Sbjct: 1381 LPGMPGLTGMKGHRGFPGLDGAKGEQGTTGEKGSMGAPGPMGPIGQIGPAGPRGERGREG 1440

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDG------------IPGTNGTNGEKGMTGPRGNRGKSG 254
              G PG  G+DGI G  G PG  G              G  G  G KG  G +G RG+SG
Sbjct: 1441 PSGPPGMRGVDGISGPPGQPGAVGKSGPPGFPGSPGAKGDQGAQGPKGSQGLQGPRGESG 1500

Query: 255  INGVPG 260
              G PG
Sbjct: 1501 RPGQPG 1506



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 66/132 (50%), Gaps = 9/132 (6%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            +G RGE G  G  GPPG  G         P+G  G PG  G+ G++G+ GP G  G  G 
Sbjct: 1328 QGTRGEPGESGTSGPPGVSG---------PRGLPGLPGKDGVSGEDGETGPPGSPGPVGP 1378

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             GL G  GL G  G  G PG +G  G  G  G  G  G PG  G  G+ G  GPRG RG+
Sbjct: 1379 RGLPGMPGLTGMKGHRGFPGLDGAKGEQGTTGEKGSMGAPGPMGPIGQIGPAGPRGERGR 1438

Query: 253  SGINGVPGTPAI 264
             G +G PG   +
Sbjct: 1439 EGPSGPPGMRGV 1450



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 18/97 (18%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD-------------- 156
            PPG+QG  G  G  GA+G  G  G RG +G PG  G PG  G  G+              
Sbjct: 1741 PPGMQGAPGPTGNTGARGSPGSSGTRGFQGLPGAAGNPGIPGKDGEAGVQGPPGLPGPVG 1800

Query: 157  -EGKRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGY 189
              G+RGP   +G MG PGP G+ G+ G +G  G  G+
Sbjct: 1801 NRGERGPPGERGPMGQPGPMGLRGETGAQGADGLTGF 1837


>gi|348533426|ref|XP_003454206.1| PREDICTED: collagen alpha-1(XXVII) chain B-like [Oreochromis
            niloticus]
          Length = 1708

 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/188 (42%), Positives = 101/188 (53%), Gaps = 7/188 (3%)

Query: 99   MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            ++G      +   PG +G  G+ G+ G  G++GV G RGE GAPG+ G PGP+G PG +G
Sbjct: 1186 LEGLPGPEGDRGRPGDRGERGESGDPGQAGQIGVDGARGEPGAPGLPGKPGPKGQPGLKG 1245

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
                KGD G  G  G  G  G +GP G  G  G  G+ GR+GL G PG+DG PG +G  G
Sbjct: 1246 S---KGDQGQKGKSGARGASGTKGPPGPEGSTGPRGVVGREGLEGPPGMDGQPGIDGSKG 1302

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC--AYKRESCS--L 274
            + G+ G  G  G PG  G  GEKG+TG  GN+G  G  G  G P     A KR S     
Sbjct: 1303 VKGEQGEDGNVGFPGKPGQQGEKGVTGLPGNQGSFGPKGEKGLPGQIGPAGKRGSIGGMG 1362

Query: 275  LPNSETSQ 282
            LP  +  Q
Sbjct: 1363 LPGKQGDQ 1370



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 87/149 (58%), Gaps = 3/149 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP GQ G  G+KG+ G KG+ G +GA G  GPPGP+G  G  G  G +G  G PG 
Sbjct: 1232 PGKPGPKGQPGLKGSKGDQGQKGKSGARGASGTKGPPGPEGSTGPRGVVGREGLEGPPGM 1291

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PG +G +G KG+ G  G +G  G+ G  GE G+ G+PG  G  G  G+ GLPG+ G 
Sbjct: 1292 DGQPGIDGSKGVKGEQGEDGNVGFPGKPGQQGEKGVTGLPGNQGSFGPKGEKGLPGQIGP 1351

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+ G  G+ G +G++   G+ G PG
Sbjct: 1352 AGKRGSIGGMGLPGKQGDQ---GVKGQPG 1377



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/125 (48%), Positives = 72/125 (57%), Gaps = 18/125 (14%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +GEKG PGV GPP   G+PG +G++G K   GYPGP G+PG+ G+R   GD G PG  G 
Sbjct: 528 KGEKGEPGVTGPP---GLPGQDGRKGQK---GYPGPAGLPGEPGER---GDDGSPGAKGY 578

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            GR G PG  G  GI G  G  GIPG  G PG D         GE+G+ G  G +GK G 
Sbjct: 579 PGRQGFPGPAGKMGIKGVRGHIGIPGLFGFPGPD---------GERGIPGVHGKKGKMGR 629

Query: 256 NGVPG 260
            G PG
Sbjct: 630 PGFPG 634



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 92/190 (48%), Gaps = 30/190 (15%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------ 151
            ++G   +T E    G +G +G  GE G  G  G KG  G +G PG  G PGPQ      
Sbjct: 679 GLKGVPGNTGEQGLKGDKGDVGLPGEPGECGFQGDKGSHGSRGLPGPCGKPGPQGKPGEK 738

Query: 152 ------------GIPGD---------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                       G PGD         EG +G +G  G PGP+G PG +G  GP G  G  
Sbjct: 739 GPVGLPGPPGLEGFPGDIGPPGQNGPEGPKGKQGTRGLPGPRGTPGLQGDEGPVGPAGPA 798

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G  GR G PG  G DG+ G  G+ G  GK    G+ G+PG  G  GE G+ G +G+R
Sbjct: 799 GPEGRPGRQGFPGLTGTDGLKGETGITGEVGKL---GERGLPGFIGPVGEMGIAGEKGDR 855

Query: 251 GKSGINGVPG 260
           G +G+ G PG
Sbjct: 856 GNTGVPGPPG 865



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 91/182 (50%), Gaps = 34/182 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG-------------- 158
            G QG +G+ G  G  GE G  G++G +G  G VG PG  G  GD G              
Sbjct: 1109 GQQGHLGETGPAGVPGEPGFVGQKGARGTIGPVGAPGRMGQQGDPGISGYKGHVGPPGPL 1168

Query: 159  -------KRGPKGD----MGYPGPQG---IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                   ++G +GD     G PGP+G    PGD G+RG  GD G  G+IG+DG  G PG 
Sbjct: 1169 GPPGPKGEKGEQGDDSKLEGLPGPEGDRGRPGDRGERGESGDPGQAGQIGVDGARGEPGA 1228

Query: 205  PGLDGIPGRNGMDGIPGK---DGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGV 258
            PGL G PG  G  G+ G     G  GK G  G +GT    G +G TGPRG  G+ G+ G 
Sbjct: 1229 PGLPGKPGPKGQPGLKGSKGDQGQKGKSGARGASGTKGPPGPEGSTGPRGVVGREGLEGP 1288

Query: 259  PG 260
            PG
Sbjct: 1289 PG 1290



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 93/206 (45%), Gaps = 57/206 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKG---- 164
           PG +G  G++G  G  G+MG+KG RG  G PG+ G PGP   +GIPG  GK+G  G    
Sbjct: 573 PGAKGYPGRQGFPGPAGKMGIKGVRGHIGIPGLFGFPGPDGERGIPGVHGKKGKMGRPGF 632

Query: 165 -----------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                            ++G PGP G+PG  G  GP G MG PG  GL G  G  GE GL
Sbjct: 633 PGDFGERGPPGPDGNPGELGAPGPCGVPGLIGDMGPVGIMGLPGPPGLKGVPGNTGEQGL 692

Query: 208 DGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTNGEK-------------- 241
            G  G  G+ G PG+             GLPG  G PG  G  GEK              
Sbjct: 693 KGDKGDVGLPGEPGECGFQGDKGSHGSRGLPGPCGKPGPQGKPGEKGPVGLPGPPGLEGF 752

Query: 242 -------GMTGPRGNRGKSGINGVPG 260
                  G  GP G +GK G  G+PG
Sbjct: 753 PGDIGPPGQNGPEGPKGKQGTRGLPG 778



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 94/184 (51%), Gaps = 27/184 (14%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGD-- 165
           PPGL G  G+KG+ G  G  G+ GE   RG+ G+PG  G PG QG PG  GK G KG   
Sbjct: 539 PPGLPGQDGRKGQKGYPGPAGLPGEPGERGDDGSPGAKGYPGRQGFPGPAGKMGIKGVRG 598

Query: 166 -------MGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDG 209
                   G+PGP   +GIPG  GK+G  G  G+PG  G  G  G        G PG  G
Sbjct: 599 HIGIPGLFGFPGPDGERGIPGVHGKKGKMGRPGFPGDFGERGPPGPDGNPGELGAPGPCG 658

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
           +PG  G  G  G  GLPG  G+ G  G  GE+G+ G +G+       G+PG P  C ++ 
Sbjct: 659 VPGLIGDMGPVGIMGLPGPPGLKGVPGNTGEQGLKGDKGDV------GLPGEPGECGFQG 712

Query: 270 ESCS 273
           +  S
Sbjct: 713 DKGS 716



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 77/160 (48%), Gaps = 21/160 (13%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G  G  G  G KG++G +G PG  G PG QG  G  G  GP G  G PG QG PG  
Sbjct: 754 GDIGPPGQNGPEGPKGKQGTRGLPGPRGTPGLQGDEGPVGPAGPAGPEGRPGRQGFPGLT 813

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLP---------------------GEPGLDGIPGRNGMD 217
           G  G KG+ G  G +G  G  GLP                     G PG  G  G  G  
Sbjct: 814 GTDGLKGETGITGEVGKLGERGLPGFIGPVGEMGIAGEKGDRGNTGVPGPPGEQGPMGHP 873

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GIPG+ GLPG  GIPG  G+ G  G+ GP+G RG  G +G
Sbjct: 874 GIPGEMGLPGLQGIPGPPGSRGSVGIRGPKGRRGPRGPDG 913



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/169 (42%), Positives = 88/169 (52%), Gaps = 24/169 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G KG  G  GE G+KG++G+ G PG  G  G QG  G  G RG  G  G PGPQ
Sbjct: 673 GLPGPPGLKGVPGNTGEQGLKGDKGDVGLPGEPGECGFQGDKGSHGSRGLPGPCGKPGPQ 732

Query: 173 GIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---- 219
           G PG++G           G  GD+G PG+   +G +G  G+ G  G+PG  G  G+    
Sbjct: 733 GKPGEKGPVGLPGPPGLEGFPGDIGPPGQ---NGPEGPKGKQGTRGLPGPRGTPGLQGDE 789

Query: 220 --------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                    G +G PG+ G PG  GT+G KG TG  G  GK G  G+PG
Sbjct: 790 GPVGPAGPAGPEGRPGRQGFPGLTGTDGLKGETGITGEVGKLGERGLPG 838



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 81/157 (51%), Gaps = 12/157 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGDM 166
            GL+GP G  G+ G  G  GVKGE+GE G  G  G PG QG      +PG++G  GPKG+ 
Sbjct: 1284 GLEGPPGMDGQPGIDGSKGVKGEQGEDGNVGFPGKPGQQGEKGVTGLPGNQGSFGPKGEK 1343

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G PG     G  GKRG  G MG PG+ G  G  G PG+ G  G     G+ G+ G  G P
Sbjct: 1344 GLPGQI---GPAGKRGSIGGMGLPGKQGDQGVKGQPGDTGEQGF---LGVFGLFGPKGPP 1397

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G  G  G +G+ G  G  G  GI G  G P 
Sbjct: 1398 GDTGPAGIQGPKGPRGLMGMEGALGPVGIIGPSGHPG 1434



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 85/179 (47%), Gaps = 37/179 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G KGE G  GE+G  GER   G PG +GP G  GI G++G RG          
Sbjct: 810 PGLTGTDGLKGETGITGEVGKLGER---GLPGFIGPVGEMGIAGEKGDRGNT-------- 858

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------------DGIPGR 213
            G+PG  G++GP G  G PG +GL G  G+PG PG                   DG  G 
Sbjct: 859 -GVPGPPGEQGPMGHPGIPGEMGLPGLQGIPGPPGSRGSVGIRGPKGRRGPRGPDGPVGE 917

Query: 214 NGMDGIPGKDGLPGKDGIPG-------TNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G  GI G DG  GK G+PG         G  GE G  GP+G +G  G +G PG   + 
Sbjct: 918 KGSTGIKGPDGPRGKLGLPGDMVMKFLLTGRLGEPGEPGPKGFQGVQGHSGPPGAKGLA 976



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 87   WLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG 146
            ++     + +   +G   +T    PPG QGP+G     G  GEMG+ G +G  G PG   
Sbjct: 839  FIGPVGEMGIAGEKGDRGNTGVPGPPGEQGPMGHP---GIPGEMGLPGLQGIPGPPGSR- 894

Query: 147  PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG----RIGLDGRDGLP 202
              G  GI G +G+RGP+G  G  G +G  G +G  GP+G +G PG    +  L GR G P
Sbjct: 895  --GSVGIRGPKGRRGPRGPDGPVGEKGSTGIKGPDGPRGKLGLPGDMVMKFLLTGRLGEP 952

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLP---------------GKDGIPGTNGTNGEKGMTGPR 247
            GEPG  G  G  G  G PG  GL                G+ G+ G  G  GE+G+ G  
Sbjct: 953  GEPGPKGFQGVQGHSGPPGAKGLAGEPGPAGPPGTIGPLGEIGLSGLPGKTGERGLPGDL 1012

Query: 248  GNRGKSGINGVPGTPAICAYKRE 270
            G +G  G+ G  G   +   + E
Sbjct: 1013 GEKGDIGLPGSIGEQGLIGERGE 1035



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 96/225 (42%), Gaps = 45/225 (20%)

Query: 92  SRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK------------GERGEK 139
             I +  + GF     E   PG+ G  G+ G  G  G+ G +            G  G  
Sbjct: 598 GHIGIPGLFGFPGPDGERGIPGVHGKKGKMGRPGFPGDFGERGPPGPDGNPGELGAPGPC 657

Query: 140 GAPGVV------------GPPGPQGIP---GDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G PG++            GPPG +G+P   G++G +G KGD+G PG  G  G +G +G  
Sbjct: 658 GVPGLIGDMGPVGIMGLPGPPGLKGVPGNTGEQGLKGDKGDVGLPGEPGECGFQGDKGSH 717

Query: 185 GDMGYPGRIGLDGRDGLPGE---------------PGLDGIPGRNGMDGIPGKD---GLP 226
           G  G PG  G  G  G PGE               PG  G PG+NG +G  GK    GLP
Sbjct: 718 GSRGLPGPCGKPGPQGKPGEKGPVGLPGPPGLEGFPGDIGPPGQNGPEGPKGKQGTRGLP 777

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G  G PG  G  G  G  GP G  G+ G  G PG       K E+
Sbjct: 778 GPRGTPGLQGDEGPVGPAGPAGPEGRPGRQGFPGLTGTDGLKGET 822



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 80/167 (47%), Gaps = 21/167 (12%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            + + G    T E    GL G +G+KG+IG   + GE G+ GERGE G     GP GP G 
Sbjct: 994  IGLSGLPGKTGER---GLPGDLGEKGDIGLPGSIGEQGLIGERGEPGIDAEAGPSGPDGA 1050

Query: 154  PGDEGKRGPKGDMGYPGP---------------QGIPGDEGKRGPKGDMGYPGRIGLDGR 198
             G++G  GP+G  G  G                 G+ G EGK G  G+ G PG  G  G+
Sbjct: 1051 KGEKGDAGPEGTTGDRGEIGLKGKEGPPGPPGLVGVRGQEGKPGKIGERGRPGEKGSKGQ 1110

Query: 199  DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G  GE G  G+PG  G  G  G  G  G  G PG  G  G+ G++G
Sbjct: 1111 QGHLGETGPAGVPGEPGFVGQKGARGTIGPVGAPGRMGQQGDPGISG 1157



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 97/239 (40%), Gaps = 76/239 (31%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE------------------RG 137
            L+  +G      E  P G  G  G+KG+ G +G  G +GE                  RG
Sbjct: 1029 LIGERGEPGIDAEAGPSGPDGAKGEKGDAGPEGTTGDRGEIGLKGKEGPPGPPGLVGVRG 1088

Query: 138  EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            ++G PG +G    +G PG++G +G +G +G  GP G+PG+ G  G KG  G  G +G  G
Sbjct: 1089 QEGKPGKIGE---RGRPGEKGSKGQQGHLGETGPAGVPGEPGFVGQKGARGTIGPVGAPG 1145

Query: 198  RDGLPGEPG-------------------------------LDGIPGRN------------ 214
            R G  G+PG                               L+G+PG              
Sbjct: 1146 RMGQQGDPGISGYKGHVGPPGPLGPPGPKGEKGEQGDDSKLEGLPGPEGDRGRPGDRGER 1205

Query: 215  ------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                        G+DG  G+ G PG  G PG  G  G KG  G +G +GKSG  G  GT
Sbjct: 1206 GESGDPGQAGQIGVDGARGEPGAPGLPGKPGPKGQPGLKGSKGDQGQKGKSGARGASGT 1264



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 99/239 (41%), Gaps = 73/239 (30%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVV-------------GPPGPQGIP 154
            P G +GP G  G +G KG  G+KG    RG+ G PG +             G PGP+G  
Sbjct: 902  PKGRRGPRGPDGPVGEKGSTGIKGPDGPRGKLGLPGDMVMKFLLTGRLGEPGEPGPKGFQ 961

Query: 155  GDEGKRGPKG------------------DMGYPGPQGIPGDEGKRG------PKGDMGYP 190
            G +G  GP G                   +G  G  G+PG  G+RG       KGD+G P
Sbjct: 962  GVQGHSGPPGAKGLAGEPGPAGPPGTIGPLGEIGLSGLPGKTGERGLPGDLGEKGDIGLP 1021

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD--------------------------- 223
            G IG  G  G  GEPG+D   G +G DG  G+                            
Sbjct: 1022 GSIGEQGLIGERGEPGIDAEAGPSGPDGAKGEKGDAGPEGTTGDRGEIGLKGKEGPPGPP 1081

Query: 224  ---GLPGKDGIPGT---NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
               G+ G++G PG     G  GEKG  G +G+ G++G  GVPG P     K    ++ P
Sbjct: 1082 GLVGVRGQEGKPGKIGERGRPGEKGSKGQQGHLGETGPAGVPGEPGFVGQKGARGTIGP 1140



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 60/117 (51%), Gaps = 24/117 (20%)

Query: 153 IPGDEGKRG---------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           +PG +G++G         PKG+ G PG  G PG  G+ G KG  GYPG  GL      PG
Sbjct: 509 LPGIKGQKGDPGLSPGQPPKGEKGEPGVTGPPGLPGQDGRKGQKGYPGPAGL------PG 562

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           EPG        G DG PG  G PG+ G PG  G  G KG+   RG+ G  G+ G PG
Sbjct: 563 EPG------ERGDDGSPGAKGYPGRQGFPGPAGKMGIKGV---RGHIGIPGLFGFPG 610



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
            PG QG  G KGE G  G++G  G+RG  G  G+ G  G QG+   PGD G++G  G  G 
Sbjct: 1331 PGNQGSFGPKGEKGLPGQIGPAGKRGSIGGMGLPGKQGDQGVKGQPGDTGEQGFLGVFGL 1390

Query: 169  PGPQGIPGD------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             GP+G PGD      +G +GP+G MG  G +G  G  G  G PG  G  G  G  G+
Sbjct: 1391 FGPKGPPGDTGPAGIQGPKGPRGLMGMEGALGPVGIIGPSGHPGPQGDKGSRGETGM 1447



 Score = 42.7 bits (99), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 37/77 (48%), Gaps = 12/77 (15%)

Query: 203 GEPGLDGIP------GRNGMDGIPGKDGLPGK------DGIPGTNGTNGEKGMTGPRGNR 250
           GEPG+ G P      GR G  G PG  GLPG+      DG PG  G  G +G  GP G  
Sbjct: 532 GEPGVTGPPGLPGQDGRKGQKGYPGPAGLPGEPGERGDDGSPGAKGYPGRQGFPGPAGKM 591

Query: 251 GKSGINGVPGTPAICAY 267
           G  G+ G  G P +  +
Sbjct: 592 GIKGVRGHIGIPGLFGF 608


>gi|354506837|ref|XP_003515466.1| PREDICTED: collagen alpha-1(III) chain-like isoform 1 [Cricetulus
           griseus]
 gi|354506839|ref|XP_003515467.1| PREDICTED: collagen alpha-1(III) chain-like isoform 2 [Cricetulus
           griseus]
          Length = 1466

 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 92/177 (51%), Gaps = 24/177 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---------------KGERGEKGAPGVVG------PPGP 150
           PG  G  GQ+GE G +G  G                KGE G  G PG  G      PPGP
Sbjct: 361 PGSNGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLMGARGPPGP 420

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G  G  G+RGP G+ G  G +G PG  G+RG  G  G PG  G DG+DG PGEPG +G+
Sbjct: 421 AGTNGAPGQRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGL 480

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---TGPRGNRGKSGINGVPGTPAI 264
           PG  G  G PG  G  G +GIPG  G  GE+G     GPRG  G+ G +G PG P +
Sbjct: 481 PGTAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGVAGEPGRDGNPGGPGM 537



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/176 (44%), Positives = 93/176 (52%), Gaps = 36/176 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGK 159
           PG +GP G+ G+ GAKGE G +GERGE G+PG+ GP            PG  G+PG  G+
Sbjct: 427 PGQRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPGTAGE 486

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           RG  G  G  GP GIPG+   +GP G+ G PG  G     G+ GEPG DG PG  GM G+
Sbjct: 487 RGAPGFRGPAGPNGIPGE---KGPAGERGAPGPAGP---RGVAGEPGRDGNPGGPGMRGV 540

Query: 220 PGKDGLPGKDGIPGTNGTNGEK------------------GMTGPRGNRGKSGING 257
           PG  G PG DG PG  G+ GE                   G  GP+GN G  G NG
Sbjct: 541 PGSPGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNG 596



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 78/154 (50%), Gaps = 18/154 (11%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGDMGYPGPQ 172
           GAKGE+G  G  G  G+PG  G PGPQG  G +G             +G  G  G PG  
Sbjct: 350 GAKGEVGPAGSPGSNGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAP 409

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDG---RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G+ G  G  GP G  G PG+ G  G   ++G  GEPG  G  G  G  GIPG  G  GKD
Sbjct: 410 GLMGARGPPGPAGTNGAPGQRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKD 469

Query: 230 GIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
           G PG  G NG  G  G RG    RG +G NG+PG
Sbjct: 470 GSPGEPGANGLPGTAGERGAPGFRGPAGPNGIPG 503



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 83/199 (41%), Gaps = 48/199 (24%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PGD G  GP G  G PG
Sbjct: 249 PPGIKGPSGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGDNGAPGPMGPRGAPG 308

Query: 171 PQ---GIPGDEGKR---------------------------GPKGDMGYPGRIGLDGRDG 200
            +   G+PG  G R                           G KG++G  G  G +G  G
Sbjct: 309 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGSPG 368

Query: 201 LPGEPGLDGIPGRN------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             GEPG  G  G                    G  GIPG  GL G  G PG  GTNG  G
Sbjct: 369 QRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGTNGAPG 428

Query: 243 MTGPRGNRGKSGINGVPGT 261
             GP G  GK+G  G PG 
Sbjct: 429 QRGPSGEPGKNGAKGEPGA 447



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 86/198 (43%), Gaps = 51/198 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
           PGL+G  G  G+ GA G MG +G  GE+G PG+   PG  G  G++G RG          
Sbjct: 283 PGLKGENGLPGDNGAPGPMGPRGAPGERGRPGL---PGAAGARGNDGARGSDGQPGPPGP 339

Query: 164 ----------------GDMGYPGPQGIPGDEGKRGP---------------------KGD 186
                           G  G PG  G PG  G+ GP                     KG+
Sbjct: 340 PGTAGFPGSPGAKGEVGPAGSPGSNGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGE 399

Query: 187 M---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           M   G PG  GL G  G PG  G +G PG+ G  G PGK+G  G+ G  G  G  G  G+
Sbjct: 400 MGPAGIPGAPGLMGARGPPGPAGTNGAPGQRGPSGEPGKNGAKGEPGARGERGEAGSPGI 459

Query: 244 TGPRGNRGKSGINGVPGT 261
            GP+G  GK G  G PG 
Sbjct: 460 PGPKGEDGKDGSPGEPGA 477



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 82/186 (44%), Gaps = 39/186 (20%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 230 GKDGESGRPGRPGERGLPGPPGIKGPSGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 289

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  GD G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 290 GLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 349

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG+NG+ G++G  GP+G+                  +G+ G  G+PG P
Sbjct: 350 GAKGEVGPAGSPGSNGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAP 409

Query: 263 AICAYK 268
            +   +
Sbjct: 410 GLMGAR 415



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 91/236 (38%), Gaps = 81/236 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+ GP G+ G+ G+ GE G  G     GE+GAPG  GP GP GIPG++G  G +G  G 
Sbjct: 457 PGIPGPKGEDGKDGSPGEPGANGLPGTAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGP 516

Query: 169 PGPQGIPGDEG------------------------KRGPKGD------------------ 186
            GP+G+ G+ G                        K GP G                   
Sbjct: 517 AGPRGVAGEPGRDGNPGGPGMRGVPGSPGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQ 576

Query: 187 ---MGYPGRIGLDGRDGLPGE---------------------------------PGLDGI 210
              MG+PG  G DG  G  GE                                  G  G 
Sbjct: 577 PGVMGFPGPKGNDGAPGKNGERGGPGGPGLPGPAGKNGETGPQGPPGPTGPSGDKGESGP 636

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           PG  G+ GIPG  G PG++G PG  G  GE G  G  G +G +G  G  G P    
Sbjct: 637 PGPQGLQGIPGTSGPPGENGKPGEPGPKGEVGAPGVPGGKGDAGAPGERGPPGTAG 692



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 229 AGKDGESGRPGRPGERGLPGPPGIKGPSGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 288

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 289 NGLPGDNGAPG 299



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G PGPQG+ G  G  GP G+ G PG  G  G  G P      G+PG  G  G PG+
Sbjct: 631 KGESGPPGPQGLQGIPGTSGPPGENGKPGEPGPKGEVGAP------GVPGGKGDAGAPGE 684

Query: 223 DGLPGKDGI 231
            G PG  G+
Sbjct: 685 RGPPGTAGV 693



 Score = 42.7 bits (99), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 75/217 (34%), Gaps = 78/217 (35%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
              G   +  E   PG +GP G  G  G KG  G +G  G  G  GV G PG  G PG  
Sbjct: 476 GANGLPGTAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGVAGEPGRDGNPGGP 535

Query: 158 GKR---------------GPKGD---------------------MGYPGPQG---IPG-- 176
           G R               GP G                      MG+PGP+G    PG  
Sbjct: 536 GMRGVPGSPGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKN 595

Query: 177 ----------------------------------DEGKRGPKGDMGY---PGRIGLDGRD 199
                                             D+G+ GP G  G    PG  G  G +
Sbjct: 596 GERGGPGGPGLPGPAGKNGETGPQGPPGPTGPSGDKGESGPPGPQGLQGIPGTSGPPGEN 655

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           G PGEPG  G  G  G+ G  G  G PG+ G PGT G
Sbjct: 656 GKPGEPGPKGEVGAPGVPGGKGDAGAPGERGPPGTAG 692


>gi|351695091|gb|EHA98009.1| Collagen alpha-1(IX) chain [Heterocephalus glaber]
          Length = 704

 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/179 (45%), Positives = 97/179 (54%), Gaps = 27/179 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G PG +G   PPG QG      I GD+G++G 
Sbjct: 353 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGEPGEIGAQGPPGAQGLRGITGIVGDKGEKGA 412

Query: 163 KGDMGYPGPQGIPG---DEGKRGP------------KGDMGYPGRIGLDGRDGLPGEPGL 207
           +G  G PGPQG+PG   D+G+RGP            +G  G PG  G  G  G+PG PG 
Sbjct: 413 RGLDGEPGPQGLPGAPGDQGQRGPLGEAGPKGDKGPQGSRGIPGVPGPKGDTGVPGIPGA 472

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
            G  G  G  G PGK G  G  G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 473 KGASGEKGNTGAPGKPGQLGNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPVGSPGLPG 531



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  GQ+G +G  G  G KG +G +G PGV GP G  G+PG  G +G  G+ G  G 
Sbjct: 425 PGAPGDQGQRGPLGEAGPKGDKGPQGSRGIPGVPGPKGDTGVPGIPGAKGASGEKGNTGA 484

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G PG  G  G  G  G PG +G  G  GLPG           G  G  G  GLPGK G+
Sbjct: 485 PGKPGQLGNSGKPGQQGPPGEVGPRGPRGLPGS---------RGEIGPVGSPGLPGKLGV 535

Query: 232 PGTNGTNGEKGMTGPRGNRGKSG-INGVPGTPAI 264
            G  G  GE+G +G  G  G  G + G PG P +
Sbjct: 536 FGEPGPKGEQGASGEEGEAGDRGDLVGNPGEPGL 569



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 84/184 (45%), Gaps = 36/184 (19%)

Query: 113 GLQGPIGQKGEIGA---KGEMGVKGERG---------------EKGAPGVVG-------- 146
           GL GP G  G +G    KGE GV G RG                 G  G +G        
Sbjct: 279 GLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGDPGRRGPPGPPGPPGPSGTIGFHDGDPLC 338

Query: 147 ----PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
               PPG  G PG  G RG KG  G     G PG +G +G +GD G PG IG  G  G  
Sbjct: 339 PNSCPPGHSGYPGLPGMRGHKGAKGE---IGEPGRQGHKGEEGDQGEPGEIGAQGPPGAQ 395

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVP 259
           G  G+ GI G  G  G  G DG PG  G+PG  G  G++   G  GP+G++G  G  G+P
Sbjct: 396 GLRGITGIVGDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPLGEAGPKGDKGPQGSRGIP 455

Query: 260 GTPA 263
           G P 
Sbjct: 456 GVPG 459



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 87/154 (56%), Gaps = 7/154 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP   KG+ G  G  G KG  GEKG  G  G PG  G  G  G++GP G++G  GP
Sbjct: 455 PGVPGP---KGDTGVPGIPGAKGASGEKGNTGAPGKPGQLGNSGKPGQQGPPGEVGPRGP 511

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----MDGIPGKDGLPG 227
           +G+PG  G+ GP G  G PG++G+ G  G  GE G  G  G  G    + G PG+ GL G
Sbjct: 512 RGLPGSRGEIGPVGSPGLPGKLGVFGEPGPKGEQGASGEEGEAGDRGDLVGNPGEPGLRG 571

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            +GI G  G  G +G  GPRG +G+ G  G+PG 
Sbjct: 572 PEGIRGLPGVEGPRGPPGPRGVQGEQGATGLPGA 605



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 73/144 (50%), Gaps = 25/144 (17%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   ++G  G+ G++G PG VGP GP+G+PG  G+ GP G  G 
Sbjct: 470 PGAKGASGEKGNTGAPGKPGQLGNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPVGSPGL 529

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD----GLPGEPGLDGIPGRNGM-------- 216
           PG  G+    G+ GPKG+ G  G  G  G      G PGEPGL G  G  G+        
Sbjct: 530 PGKLGV---FGEPGPKGEQGASGEEGEAGDRGDLVGNPGEPGLRGPEGIRGLPGVEGPRG 586

Query: 217 -------DGIPGKDGLPGKDGIPG 233
                   G  G  GLPG  G PG
Sbjct: 587 PPGPRGVQGEQGATGLPGAQGSPG 610



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 69/147 (46%), Gaps = 15/147 (10%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG             QG PG+ G +GP 
Sbjct: 345 GHSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGD------------QGEPGEIGAQGPP 392

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G  G  G+ G  G  G  GLDG PG  G+ G PG  G   + G  G  G  G+KG  
Sbjct: 393 GAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGAPGDQG---QRGPLGEAGPKGDKGPQ 449

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRES 271
           G RG  G  G  G  G P I   K  S
Sbjct: 450 GSRGIPGVPGPKGDTGVPGIPGAKGAS 476


>gi|49225581|ref|NP_990438.1| collagen alpha-1(VI) chain precursor [Gallus gallus]
 gi|115314|sp|P20785.1|CO6A1_CHICK RecName: Full=Collagen alpha-1(VI) chain; Flags: Precursor
 gi|62875|emb|CAA41062.1| collagen alpha 1 type VI [Gallus gallus]
 gi|63302|emb|CAA45788.1| collagen type VI alpha 1 subunit [Gallus gallus]
 gi|211354|gb|AAB59954.1| alpha-1 type VI collagen precursor [Gallus gallus]
          Length = 1019

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 89/172 (51%), Gaps = 34/172 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGDM 166
           G+ G  G+KG  G +GE G  GE G++G+PG  GPPG +G       PG  G RGP+GD+
Sbjct: 384 GIPGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPGDRGPRGDL 443

Query: 167 GYPGPQG------------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G PGP G                          GD+G RG +G  G PG  GL G  GL 
Sbjct: 444 GEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPGAPGLPGDPGLM 503

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           GE G DG PG NG  G PG  G  G  G PG NGT   KG  GP+G+ G++G
Sbjct: 504 GERGEDGPPG-NGTIGFPGAPGQQGDRGDPGINGT---KGYVGPKGDEGEAG 551



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/163 (43%), Positives = 80/163 (49%), Gaps = 28/163 (17%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGYPGPQGIPGDEGKR 181
           G  G  G+ G  GEKGAPG  G PGP G  GDEG     GP G+ G  G +G PG  G R
Sbjct: 378 GKPGRQGIPGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPGDR 437

Query: 182 GPKGDMGYPGRIGLDGR------------------------DGLPGEPGLDGIPGRNGMD 217
           GP+GD+G PG  G  GR                        DG  G  G  G PG  G+ 
Sbjct: 438 GPRGDLGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPGAPGLP 497

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G  G+DG PG NGT G  G  G +G+RG  GING  G
Sbjct: 498 GDPGLMGERGEDGPPG-NGTIGFPGAPGQQGDRGDPGINGTKG 539



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 82/174 (47%), Gaps = 33/174 (18%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
            +GE G  G  G KG+ G+ G PG +GP G QG+ GD+G RG KG  G    +G  G++G
Sbjct: 265 HEGERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKGDKGSRGEKGSRG---AKGAKGEKG 321

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---------------------------PG 212
           KRG  G  G  G  G  G  G  G PG DG                            PG
Sbjct: 322 KRGIDGIDGMKGEAGYPGLPGCKGSPGFDGTQGPPGPKGDPGAYGPKGGKGEPGEDGKPG 381

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           R G+ G PG+ G PG  G PG  G  G++   G  GP G RG +G  G PG+P 
Sbjct: 382 RQGIPGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPG 435



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--MGYPGPQGIPGDEGKRGPK 184
           +G+ G +G  G KG+PG  G PG  G+ G+ G+ GP G+  +G+P   G PG +G RG  
Sbjct: 476 RGDDGPRGNEGPKGSPGAPGLPGDPGLMGERGEDGPPGNGTIGFP---GAPGQQGDRGDP 532

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDG-IPGRNGMDGIPG 221
           G  G  G +G  G +G  G+PG D    G +G+ G  G
Sbjct: 533 GINGTKGYVGPKGDEGEAGDPGNDNPTAGPSGIKGAKG 570



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 48/93 (51%), Gaps = 6/93 (6%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--VVGPPGPQGIPGDEGKRGPKGDMGY 168
           P G +GP G  G  G  G+ G+ GERGE G PG   +G PG  G  GD G  G  G  GY
Sbjct: 481 PRGNEGPKGSPGAPGLPGDPGLMGERGEDGPPGNGTIGFPGAPGQQGDRGDPGINGTKGY 540

Query: 169 PGPQGIPGDEGKRG-PKGDMGYPGRIGLDGRDG 200
            GP+   GDEG+ G P  D    G  G+ G  G
Sbjct: 541 VGPK---GDEGEAGDPGNDNPTAGPSGIKGAKG 570



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G+ GLPG+ G  G PGR G  G  G  G+ G  G   + G  G +G  G +G +GK 
Sbjct: 267 GERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKGDKG---SRGEKGSRGAKGAKGEKGKR 323

Query: 254 GINGVPGTPAICAY 267
           GI+G+ G      Y
Sbjct: 324 GIDGIDGMKGEAGY 337


>gi|13560496|gb|AAK30077.1|AF336811_1 collagen-like protein B [Streptococcus pyogenes]
          Length = 326

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/194 (41%), Positives = 103/194 (53%), Gaps = 15/194 (7%)

Query: 88  LNAYSRI---PLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
           LN+Y ++    L  ++G         P G QG  G KG+ G  GE G +GE G  G  G 
Sbjct: 67  LNSYLKVLDGSLSQLKGEKGERGPVGPAGPQGLQGTKGDRGETGEQGQRGETGPAGPQGP 126

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            GP GP G  G+ G +GP G  G  G  G  G  GK G  G  G PG+ G +G+DGLPG+
Sbjct: 127 AGPVGPAGKDGEAGAQGPVGPAGKDGQDGKDGLPGKGGQNGKDGLPGKDGQNGKDGLPGK 186

Query: 205 PGLDGIPGRNGMDGIPGKDGLP------GKDGIPGTNGTNGEKGMTGPRGNRGKSGI--- 255
            G DG  G++G+ G  GKDGLP      GKDG+PG +G +G+ G  G  G  GK G+   
Sbjct: 187 DGKDGQDGKDGLPGKDGKDGLPGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGLPGK 246

Query: 256 ---NGVPGTPAICA 266
              +G PG PA  A
Sbjct: 247 DGKDGQPGKPAPKA 260


>gi|326668480|ref|XP_001920005.3| PREDICTED: collagen alpha-1(II) chain-like [Danio rerio]
          Length = 1456

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/194 (40%), Positives = 100/194 (51%), Gaps = 18/194 (9%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP----------- 147
           M+G   +T    P GLQGP G+ G  G+ G+ G +G  G  G PGV GP           
Sbjct: 330 MKGQAGATGPRGPSGLQGPRGESGRQGSPGKQGTQGSAGPDGTPGVKGPAGIPGVQGPVG 389

Query: 148 -------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                  PGPQG PG  G +G  GD+G PG +G PG +G+ GP G  G  G  G +G+ G
Sbjct: 390 LIGQPGLPGPQGSPGLTGAKGQLGDLGSPGFKGEPGAKGEVGPPGVQGEMGPTGEEGKRG 449

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G  G PG NG  G PG  G PG DG+PG  G  GE+G+ G  G +G SG  G PG
Sbjct: 450 PRGDGGAVGAPGPNGERGAPGNRGFPGADGLPGPKGAQGERGLPGSSGPKGTSGDPGRPG 509

Query: 261 TPAICAYKRESCSL 274
              I   +  + +L
Sbjct: 510 ETGIPGARGLTGAL 523



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/155 (49%), Positives = 87/155 (56%), Gaps = 15/155 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGD 165
           PGL GP G  G  GAKG++G     G +GE GA G VGPPG QG     G+EGKRGP+GD
Sbjct: 394 PGLPGPQGSPGLTGAKGQLGDLGSPGFKGEPGAKGEVGPPGVQGEMGPTGEEGKRGPRGD 453

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G     G PG  G+RG  G+ G+PG  GL G  G  GE GL G  G  G  G PG+   
Sbjct: 454 GGA---VGAPGPNGERGAPGNRGFPGADGLPGPKGAQGERGLPGSSGPKGTSGDPGR--- 507

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG+ GIPG  G  G  GM   +G  GK G  G PG
Sbjct: 508 PGETGIPGARGLTGALGM---QGAEGKIGPQGAPG 539



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 98/235 (41%), Gaps = 63/235 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGD--- 165
           PG  GP G  G+ G  GE G+ G RG  GA G+ G  G   PQG PGD+G  GP G    
Sbjct: 493 PGSSGPKGTSGDPGRPGETGIPGARGLTGALGMQGAEGKIGPQGAPGDDGNPGPAGSTGT 552

Query: 166 ------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------------------- 200
                 MG PGP+G  GD GK G  G  G PG+ G +G+DG                   
Sbjct: 553 RGAAGSMGLPGPKGFSGDPGKAGETGSSGAPGQRGPNGKDGEEGPAGTTGPPGVAGKRGE 612

Query: 201 -----------------------------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                                        + GE G  G+ G  G  G PG+ G PG +G+
Sbjct: 613 QGPPGLTGFQGLPGPPGPPGQSGKPGDEGIHGEEGGPGLTGPRGERGTPGERGDPGPNGL 672

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE---SCSLLPNSETSQL 283
           PG  G+ G  G  GP+G  G +GI G PG P +     E   S    P  E+  +
Sbjct: 673 PGAKGSAGGPGHDGPKGKHGPAGIVGEPGPPGLQGMPGERGISGPAGPKGESGAI 727



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 79/148 (53%), Gaps = 9/148 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +GE G  G  G KG  G+ G PG  G PG +G+ G  G +G +G +G   PQ
Sbjct: 479 GLPGPKGAQGERGLPGSSGPKGTSGDPGRPGETGIPGARGLTGALGMQGAEGKIG---PQ 535

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR---NGMDGIPGKDGLPGKD 229
           G PGD+G  GP G  G     G  G  GLPG  G  G PG+    G  G PG+ G  GKD
Sbjct: 536 GAPGDDGNPGPAGSTGT---RGAAGSMGLPGPKGFSGDPGKAGETGSSGAPGQRGPNGKD 592

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  GT G  G+ G RG +G  G+ G
Sbjct: 593 GEEGPAGTTGPPGVAGKRGEQGPPGLTG 620



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 91/196 (46%), Gaps = 27/196 (13%)

Query: 89  NAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP 148
            A   +    +QG    T E    G +GP G  G +GA G  G +G  G +G PG  G P
Sbjct: 425 GAKGEVGPPGVQGEMGPTGEE---GKRGPRGDGGAVGAPGPNGERGAPGNRGFPGADGLP 481

Query: 149 GPQG------IPGDEGKRGPKGDMGYPGPQGIPGD------------EGKRGPKGDMGYP 190
           GP+G      +PG  G +G  GD G PG  GIPG             EGK GP+G  G  
Sbjct: 482 GPKGAQGERGLPGSSGPKGTSGDPGRPGETGIPGARGLTGALGMQGAEGKIGPQGAPGDD 541

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---NGTNGEK---GMT 244
           G  G  G  G  G  G  G+PG  G  G PGK G  G  G PG    NG +GE+   G T
Sbjct: 542 GNPGPAGSTGTRGAAGSMGLPGPKGFSGDPGKAGETGSSGAPGQRGPNGKDGEEGPAGTT 601

Query: 245 GPRGNRGKSGINGVPG 260
           GP G  GK G  G PG
Sbjct: 602 GPPGVAGKRGEQGPPG 617



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 90/195 (46%), Gaps = 42/195 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGP------ 162
           PGL+G  GQ G  G KGE G  G +GE G+PG   +VGPPGP G+ G+ G+ GP      
Sbjct: 241 PGLKGSKGQLGLQGMKGEPGAVGSKGESGSPGTMGLVGPPGPIGMTGERGRIGPTGTVGK 300

Query: 163 ------------------------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                                         KG  G  GP+G  G +G RG  G  G PG+
Sbjct: 301 RGLSGNVGKPGPLGPMGISGGPGFPGSPGMKGQAGATGPRGPSGLQGPRGESGRQGSPGK 360

Query: 193 IGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G  G    DG PG  G  GIPG  G  G+ G+ GLPG  G PG  G  G+ G  G  G 
Sbjct: 361 QGTQGSAGPDGTPGVKGPAGIPGVQGPVGLIGQPGLPGPQGSPGLTGAKGQLGDLGSPGF 420

Query: 250 RGKSGINGVPGTPAI 264
           +G+ G  G  G P +
Sbjct: 421 KGEPGAKGEVGPPGV 435



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 72/139 (51%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G +G  G+ G RGE+G PG  G PGP G+PG +G  G  G  G  G  G  G  G+ GP 
Sbjct: 644 GEEGGPGLTGPRGERGTPGERGDPGPNGLPGAKGSAGGPGHDGPKGKHGPAGIVGEPGPP 703

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G PG  G+ G  G  GE G  G  G  G  G  G  GLPG  G  G  G +GEKG  
Sbjct: 704 GLQGMPGERGISGPAGPKGESGAIGDRGGEGAAGNDGVRGLPGPVGPIGPAGPSGEKGEQ 763

Query: 245 GPRGNRGKSGINGVPGTPA 263
           GPRG  G  G   +PG+P 
Sbjct: 764 GPRGPSGSPGSRAMPGSPG 782



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 87/177 (49%), Gaps = 18/177 (10%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              +G   S     P G  G  G+ GE G+ G  G +G  G+ G  G  G  GP G+ G 
Sbjct: 550 TGTRGAAGSMGLPGPKGFSGDPGKAGETGSSGAPGQRGPNGKDGEEGPAGTTGPPGVAGK 609

Query: 157 EGKRGPKGDMGYPGP---------------QGIPGDEGK---RGPKGDMGYPGRIGLDGR 198
            G++GP G  G+ G                +GI G+EG     GP+G+ G PG  G  G 
Sbjct: 610 RGEQGPPGLTGFQGLPGPPGPPGQSGKPGDEGIHGEEGGPGLTGPRGERGTPGERGDPGP 669

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +GLPG  G  G PG +G  G  G  G+ G+ G PG  G  GE+G++GP G +G+SG 
Sbjct: 670 NGLPGAKGSAGGPGHDGPKGKHGPAGIVGEPGPPGLQGMPGERGISGPAGPKGESGA 726



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 86/184 (46%), Gaps = 39/184 (21%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGA---------PGVVGPPGPQGIPG 155
           E  PPGLQG  G++G     G KGE G  G+RG +GA         PG VGP GP G  G
Sbjct: 699 EPGPPGLQGMPGERGISGPAGPKGESGAIGDRGGEGAAGNDGVRGLPGPVGPIGPAGPSG 758

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY-------------------------- 189
           ++G++GP+G  G PG + +PG  G+ GP G +G+                          
Sbjct: 759 EKGEQGPRGPSGSPGSRAMPGSPGEPGPIGPVGFAGPPGPDGQPGVKGETGEEGAKGEGG 818

Query: 190 -PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG  G+ G+ G  G  G+ G+ G  G  G  G  G PG  G  G  G+ G  G  GP G
Sbjct: 819 SPGPQGMAGKPGPQGVVGITGLKGGRGTQGAAGPSGFPGFAGGVGPAGSAGPVGEPGPIG 878

Query: 249 NRGK 252
             GK
Sbjct: 879 APGK 882



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 83/169 (49%), Gaps = 27/169 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G  G+ G+ GE G  G  GEKG PG  G  G  G+PG  G +G KG +G    Q
Sbjct: 197 GPRGPDGSPGKAGSDGEPGPPGNAGEKGYPGSPGSRGFPGLPGQPGLKGSKGQLGL---Q 253

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+ G+ G  G KG+ G PG +GL    G PG  G+ G  GR G  G  GK GL G  G P
Sbjct: 254 GMKGEPGAVGSKGESGSPGTMGL---VGPPGPIGMTGERGRIGPTGTVGKRGLSGNVGKP 310

Query: 233 GTNG---------------TNGEKGMTGPR------GNRGKSGINGVPG 260
           G  G                 G+ G TGPR      G RG+SG  G PG
Sbjct: 311 GPLGPMGISGGPGFPGSPGMKGQAGATGPRGPSGLQGPRGESGRQGSPG 359



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 86/196 (43%), Gaps = 50/196 (25%)

Query: 112 PGLQGPIG----------------QKGEIGAKGEM-GVKGERGEK--------------- 139
           PG  GPIG                Q G++G  G + G  GE G +               
Sbjct: 122 PGEPGPIGTSLPGSQFASHMASGFQGGKLGLAGMVTGAPGESGSRGLPGPAGPPGPTGAQ 181

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           GAPG  G PGP       G  GP+G  G PG  G  G+ G  G  G+ GYPG  G  G  
Sbjct: 182 GAPGDAGDPGPM------GSFGPRGPDGSPGKAGSDGEPGPPGNAGEKGYPGSPGSRGFP 235

Query: 200 GLPGEPGLDGIPGR---NGMDGIPGKDGLPGKDGIPGTN---------GTNGEKGMTGPR 247
           GLPG+PGL G  G+    GM G PG  G  G+ G PGT          G  GE+G  GP 
Sbjct: 236 GLPGQPGLKGSKGQLGLQGMKGEPGAVGSKGESGSPGTMGLVGPPGPIGMTGERGRIGPT 295

Query: 248 GNRGKSGINGVPGTPA 263
           G  GK G++G  G P 
Sbjct: 296 GTVGKRGLSGNVGKPG 311



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 86/230 (37%), Gaps = 39/230 (16%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   +G   +  E   PG  G  G KG  G  G  G KG+ G  G  G  GPPG QG+PG
Sbjct: 651 LTGPRGERGTPGERGDPGPNGLPGAKGSAGGPGHDGPKGKHGPAGIVGEPGPPGLQGMPG 710

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------GLDG 209
           + G  GP G  G  G  G  G EG  G  G  G PG +G  G  G  GE       G  G
Sbjct: 711 ERGISGPAGPKGESGAIGDRGGEGAAGNDGVRGLPGPVGPIGPAGPSGEKGEQGPRGPSG 770

Query: 210 IPGRNGMDGIPGKDG---------------------------------LPGKDGIPGTNG 236
            PG   M G PG+ G                                  PG  G+ G  G
Sbjct: 771 SPGSRAMPGSPGEPGPIGPVGFAGPPGPDGQPGVKGETGEEGAKGEGGSPGPQGMAGKPG 830

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
             G  G+TG +G RG  G  G  G P        + S  P  E   +  P
Sbjct: 831 PQGVVGITGLKGGRGTQGAAGPSGFPGFAGGVGPAGSAGPVGEPGPIGAP 880



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 91/206 (44%), Gaps = 36/206 (17%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKG------EMGVKGERGEKGAPGVVGPPGPQGIP 154
           G   S  E  PPG  G  G  G  G++G      + G+KG +G+ G  G+ G PG  G  
Sbjct: 206 GKAGSDGEPGPPGNAGEKGYPGSPGSRGFPGLPGQPGLKGSKGQLGLQGMKGEPGAVGSK 265

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDE---------GKRGPKGDMGYPGRI------------ 193
           G+ G  G  G +G PGP G+ G+          GKRG  G++G PG +            
Sbjct: 266 GESGSPGTMGLVGPPGPIGMTGERGRIGPTGTVGKRGLSGNVGKPGPLGPMGISGGPGFP 325

Query: 194 ------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMT 244
                 G  G  G  G  GL G  G +G  G PGK G     G DG PG  G  G  G+ 
Sbjct: 326 GSPGMKGQAGATGPRGPSGLQGPRGESGRQGSPGKQGTQGSAGPDGTPGVKGPAGIPGVQ 385

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRE 270
           GP G  G+ G+ G  G+P +   K +
Sbjct: 386 GPVGLIGQPGLPGPQGSPGLTGAKGQ 411



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 22/126 (17%)

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G PG  G PG  G  GP+G  G PG+ G DG  G PG  G  G PG  G  G PG   L
Sbjct: 181 QGAPGDAGDPGPMGSFGPRGPDGSPGKAGSDGEPGPPGNAGEKGYPGSPGSRGFPG---L 237

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI 285
           PG+ G+               +G++G+ G+ G+ G P     K ES S      T  L+ 
Sbjct: 238 PGQPGL---------------KGSKGQLGLQGMKGEPGAVGSKGESGS----PGTMGLVG 278

Query: 286 PPTIVG 291
           PP  +G
Sbjct: 279 PPGPIG 284



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 60/134 (44%), Gaps = 39/134 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERG---------------------------EKGAPGVV 145
            G +G  G +G  GA G +GV+G+RG                           ++G  G  
Sbjct: 992  GAEGLPGAEGVQGADGIIGVRGDRGDSGPEGLAGGQGASGSQGPVGTPGGPGQRGHQGAR 1051

Query: 146  GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            GPPG  G  G  GK+GP+G M         GD+G++G  GD G  G  G  G  GLPG P
Sbjct: 1052 GPPGADGAAGIRGKKGPQGPM---------GDKGEKGEAGDRGQKGHRGFTGLSGLPGAP 1102

Query: 206  GLDGIPGRNGMDGI 219
               G PG +G  GI
Sbjct: 1103 ---GAPGDDGAIGI 1113



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 62/136 (45%), Gaps = 15/136 (11%)

Query: 143  GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G  GP G+PG  G RG  G  G PG +G+ G +G  G +GD G  G  GL G  G  
Sbjct: 971  GTKGGAGPIGLPGAAGPRGDAGAEGLPGAEGVQGADGIIGVRGDRGDSGPEGLAGGQGAS 1030

Query: 203  ---------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                           G  G  G PG +G  GI GK G  G  G  G  G  G++G  G R
Sbjct: 1031 GSQGPVGTPGGPGQRGHQGARGPPGADGAAGIRGKKGPQGPMGDKGEKGEAGDRGQKGHR 1090

Query: 248  GNRGKSGINGVPGTPA 263
            G  G SG+ G PG P 
Sbjct: 1091 GFTGLSGLPGAPGAPG 1106


>gi|432872845|ref|XP_004072153.1| PREDICTED: collagen alpha-1(XXVII) chain B-like [Oryzias latipes]
          Length = 1604

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 87/165 (52%)

Query: 99   MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            ++G      +  P G QG  G+ G+ G  G+ GV G RGE G PG  G  G  G PG  G
Sbjct: 1146 VEGSPGPQGDTGPSGNQGERGEPGDPGRVGQTGVVGPRGEAGTPGRPGLKGKPGTPGASG 1205

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             +GP G  G PGP+G+ G EG  GP G  G PG+ G  G  G  G+ G  G PG++G+ G
Sbjct: 1206 TKGPSGPEGLPGPRGVSGTEGLEGPPGVDGLPGQDGSKGVKGEQGKDGETGSPGKSGLQG 1265

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G  GLPG  G  G  G  G  G TGP G RG  G  G+PG P 
Sbjct: 1266 PKGVMGLPGSQGSSGPKGERGLPGQTGPAGKRGSVGATGLPGRPG 1310



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 82/145 (56%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  G +G +GE G  G  G+KG+ G  GA G  GP GP+G+PG  G  G +G  G PG  
Sbjct: 1175 GQTGVVGPRGEAGTPGRPGLKGKPGTPGASGTKGPSGPEGLPGPRGVSGTEGLEGPPGVD 1234

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+PG +G +G KG+ G  G  G  G+ GL G  G+ G+PG  G  G  G+ GLPG+ G  
Sbjct: 1235 GLPGQDGSKGVKGEQGKDGETGSPGKSGLQGPKGVMGLPGSQGSSGPKGERGLPGQTGPA 1294

Query: 233  GTNGTNGEKGMTGPRGNRGKSGING 257
            G  G+ G  G+ G  G+RG  G  G
Sbjct: 1295 GKRGSVGATGLPGRPGDRGTKGQPG 1319



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 98/224 (43%), Gaps = 25/224 (11%)

Query: 74   KEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM--- 130
            K QQ   H      +     +  V  +G   +      PG  G  G  G  G KG M   
Sbjct: 1068 KGQQG--HPGETGLMGEQGELGFVGQKGARGTIGPVGAPGSMGQQGDPGLAGYKGHMGPL 1125

Query: 131  ---------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
                     G KGERGE     V G PGPQG   D G  G +G+ G PG  G  G  G  
Sbjct: 1126 GPLGPPGAKGEKGERGEDSE--VEGSPGPQG---DTGPSGNQGERGEPGDPGRVGQTGVV 1180

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGL------DGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            GP+G+ G PGR GL G+ G PG  G       +G+PG  G+ G  G +G PG DG+PG +
Sbjct: 1181 GPRGEAGTPGRPGLKGKPGTPGASGTKGPSGPEGLPGPRGVSGTEGLEGPPGVDGLPGQD 1240

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
            G+ G KG  G  G  G  G +G+ G   +        S  P  E
Sbjct: 1241 GSKGVKGEQGKDGETGSPGKSGLQGPKGVMGLPGSQGSSGPKGE 1284



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 84/173 (48%), Gaps = 24/173 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL+G  G  G  G KG  G   + G RG  G  G+ GPPG  G+PG +G +G KG+ G 
Sbjct: 1192 PGLKGKPGTPGASGTKGPSGPEGLPGPRGVSGTEGLEGPPGVDGLPGQDGSKGVKGEQGK 1251

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLD---GRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G  G PG  G +GPKG MG PG  G     G  GLPG+ G  G  G  G  G+PG+ G 
Sbjct: 1252 DGETGSPGKSGLQGPKGVMGLPGSQGSSGPKGERGLPGQTGPAGKRGSVGATGLPGRPGD 1311

Query: 226  PGKDGIPGTNGTN------------------GEKGMTGPRGNRGKSGINGVPG 260
             G  G PG  G                    G  G+ GP+G RG  G+ GV G
Sbjct: 1312 RGTKGQPGDCGERGFSGVMGLFGPKGPLGDVGPAGIQGPKGPRGLMGVEGVSG 1364



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 83/178 (46%), Gaps = 18/178 (10%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L   +G   +     PPG+ G  GQ G  G KGE G  GE G  G  G+ GP G  G+PG
Sbjct: 1215 LPGPRGVSGTEGLEGPPGVDGLPGQDGSKGVKGEQGKDGETGSPGKSGLQGPKGVMGLPG 1274

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---- 211
             +G  GPKG+ G PG     G  GKRG  G  G PGR G  G  G PG+ G  G      
Sbjct: 1275 SQGSSGPKGERGLPGQT---GPAGKRGSVGATGLPGRPGDRGTKGQPGDCGERGFSGVMG 1331

Query: 212  -----------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                       G  G+ G  G  GL G +G+ G  G  G  G  GP+G+RG  G  G+
Sbjct: 1332 LFGPKGPLGDVGPAGIQGPKGPRGLMGVEGVSGPVGIIGPSGHPGPQGDRGSRGETGL 1389



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 93/209 (44%), Gaps = 42/209 (20%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQG 152
           L   +GF     +  PPG  GP G KG++G  G  G+   +G  G++G  G+ GP GP+G
Sbjct: 749 LPGTEGFPG---DIGPPGHNGPAGLKGDVGPPGPAGLFGAEGRPGKQGLAGLTGPDGPKG 805

Query: 153 IPGDEGKRGPKGDMGYP------GPQGIPGDEGKRGP------------KGDMGYPGRIG 194
             G  G+ G  GD G P      G  G PG++G RG              G  G PG +G
Sbjct: 806 ETGISGEVGKLGDTGIPGFVGPVGEMGFPGEKGDRGKMGIPGPPGEPGQMGHSGLPGEVG 865

Query: 195 LDGRDGLPGEPGLDGIPG------------------RNGMDGIPGKDGLPGKDGIPGTNG 236
           + G  G+PG PG  G PG                    G  G+ G DG PGK G  G  G
Sbjct: 866 MPGLQGVPGPPGSRGFPGIRGPKGTKGPGGPDGPGGDLGSAGVKGPDGPPGKYGTSGEMG 925

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
             GE G  GP+G  G  G +G PG   I 
Sbjct: 926 KLGEPGEAGPKGFPGVQGPSGPPGAKGIA 954



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 86/178 (48%), Gaps = 30/178 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  GQKG  G  G  G  G+RG+ G+PG  G PG QGIPG  GK   KG+MG PG
Sbjct: 578 PPGHNGRKGQKGHSGPAGLPGEPGDRGDDGSPGAKGYPGRQGIPGVRGK---KGEMGRPG 634

Query: 171 PQGIPGDE------------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GI G              G  GP G  G+ G +G  G  GLPG PGL G+ G  G  G
Sbjct: 635 FAGIVGKRGPPGPDGNPGELGAPGPCGVNGFSGNVGPVGTVGLPGPPGLQGMLGNPGEAG 694

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMT---------------GPRGNRGKSGINGVPGT 261
           + G  G  G  G  G  G  G+KG++               G  G +G +G  G+PGT
Sbjct: 695 LRGDQGDVGSPGEQGECGFQGDKGISGSPGLPGPPGKPGLQGEPGEKGPAGAPGLPGT 752



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 79/156 (50%), Gaps = 15/156 (9%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            GE+GA G++G  G  GE+G  G  G PG  G PG  G  G KGD G PGP      EG R
Sbjct: 970  GEMGAAGDVGPAGSFGEEGLSGQRGEPGLDGEPGPSGPDGAKGDKGEPGP------EGPR 1023

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G +G+ G+ G+ G  G  G  G  G +  PG+ G +G  G  G  G+ G PG  G  GE+
Sbjct: 1024 GEQGESGFTGKEGASGPAGPVGLRGPEAKPGKIGENGKAGHKGSKGQQGHPGETGLMGEQ 1083

Query: 242  ---GMTGPRGNRGKSGINGVPGT------PAICAYK 268
               G  G +G RG  G  G PG+      P +  YK
Sbjct: 1084 GELGFVGQKGARGTIGPVGAPGSMGQQGDPGLAGYK 1119



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 80/164 (48%), Gaps = 21/164 (12%)

Query: 112 PGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL   + P GQKGE G     G  G  G KG  G  GP G  G PGD G  G  G  GY
Sbjct: 555 PGLSPGRAPKGQKGEPGIVAPPGPPGHNGRKGQKGHSGPAGLPGEPGDRGDDGSPGAKGY 614

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------------GLPGEPGLDGIPGR--- 213
           PG QGIPG  GK   KG+MG PG  G+ G+             G PG  G++G  G    
Sbjct: 615 PGRQGIPGVRGK---KGEMGRPGFAGIVGKRGPPGPDGNPGELGAPGPCGVNGFSGNVGP 671

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G+PG  GL G  G PG  G  G++G  G  G +G+ G  G
Sbjct: 672 VGTVGLPGPPGLQGMLGNPGEAGLRGDQGDVGSPGEQGECGFQG 715



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 81/171 (47%), Gaps = 33/171 (19%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGDMGYPGPQG--- 173
           E+GA G  GV G  G  G  G VG PGP G+      PG+ G RG +GD+G PG QG   
Sbjct: 653 ELGAPGPCGVNGFSGNVGPVGTVGLPGPPGLQGMLGNPGEAGLRGDQGDVGSPGEQGECG 712

Query: 174 ---------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDG 209
                                + G+ G++GP G  G PG  G  G  G PG     GL G
Sbjct: 713 FQGDKGISGSPGLPGPPGKPGLQGEPGEKGPAGAPGLPGTEGFPGDIGPPGHNGPAGLKG 772

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G+ G +G PGK G+ G  G +G KG TG  G  GK G  G+PG
Sbjct: 773 DVGPPGPAGLFGAEGRPGKQGLAGLTGPDGPKGETGISGEVGKLGDTGIPG 823



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 76/152 (50%), Gaps = 15/152 (9%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  G  G  G  G+ GE G+ G+RGE G  G  GP GP G  GD+G+ GP+G  G  G  
Sbjct: 970  GEMGAAGDVGPAGSFGEEGLSGQRGEPGLDGEPGPSGPDGAKGDKGEPGPEGPRGEQGES 1029

Query: 173  GIPGDEGKRGPKGDMGY------PGRIGLDGR---------DGLPGEPGLDGIPGRNGMD 217
            G  G EG  GP G +G       PG+IG +G+          G PGE GL G  G  G  
Sbjct: 1030 GFTGKEGASGPAGPVGLRGPEAKPGKIGENGKAGHKGSKGQQGHPGETGLMGEQGELGFV 1089

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G  G  G  G  G PG+ G  G+ G+ G +G+
Sbjct: 1090 GQKGARGTIGPVGAPGSMGQQGDPGLAGYKGH 1121



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 88/196 (44%), Gaps = 52/196 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RG 161
            P GL+GP  + G+IG  G+ G KG +G++G PG  G      + G++G+         RG
Sbjct: 1043 PVGLRGPEAKPGKIGENGKAGHKGSKGQQGHPGETG------LMGEQGELGFVGQKGARG 1096

Query: 162  PKGDMGYPGPQGIPGD----------------------------------EGKRGPKGDM 187
              G +G PG  G  GD                                  EG  GP+GD 
Sbjct: 1097 TIGPVGAPGSMGQQGDPGLAGYKGHMGPLGPLGPPGAKGEKGERGEDSEVEGSPGPQGDT 1156

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMT 244
            G  G  G  G  G PG  G  G+ G  G  G PG+ GL GK G PG +GT   +G +G+ 
Sbjct: 1157 GPSGNQGERGEPGDPGRVGQTGVVGPRGEAGTPGRPGLKGKPGTPGASGTKGPSGPEGLP 1216

Query: 245  GPRGNRGKSGINGVPG 260
            GPRG  G  G+ G PG
Sbjct: 1217 GPRGVSGTEGLEGPPG 1232



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 72/154 (46%), Gaps = 24/154 (15%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +G+KG PG+V PPGP   PG  G++G KG  G  G  G PGD G  G  G  GYPGR G+
Sbjct: 564 KGQKGEPGIVAPPGP---PGHNGRKGQKGHSGPAGLPGEPGDRGDDGSPGAKGYPGRQGI 620

Query: 196 DGRDGLPGE---PGLDGI------------------PGRNGMDGIPGKDGLPGKDGIPGT 234
            G  G  GE   PG  GI                  PG  G++G  G  G  G  G+PG 
Sbjct: 621 PGVRGKKGEMGRPGFAGIVGKRGPPGPDGNPGELGAPGPCGVNGFSGNVGPVGTVGLPGP 680

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G  G  G RG  G  G PG    C ++
Sbjct: 681 PGLQGMLGNPGEAGLRGDQGDVGSPGEQGECGFQ 714



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 78/163 (47%), Gaps = 30/163 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++GP G  G+ G  GEMG  GE GE G         P+G PG +G  GP      PG +
Sbjct: 907  GVKGPDGPPGKYGTSGEMGKLGEPGEAG---------PKGFPGVQGPSGP------PGAK 951

Query: 173  GIPGDE------------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GI G              G+ G  GD+G  G  G +G  G  GEPGLDG PG +G DG  
Sbjct: 952  GIAGQPGPAGPPGRLGPLGEMGAAGDVGPAGSFGEEGLSGQRGEPGLDGEPGPSGPDGAK 1011

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G PG +G     G  GE G TG  G  G +G  G+ G  A
Sbjct: 1012 GDKGEPGPEG---PRGEQGESGFTGKEGASGPAGPVGLRGPEA 1051



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 76/182 (41%), Gaps = 34/182 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +G  G  GE G  G  G KG++GE G  G  G  G  G  G EG  GP G +G  GP+
Sbjct: 991  GQRGEPGLDGEPGPSGPDGAKGDKGEPGPEGPRGEQGESGFTGKEGASGPAGPVGLRGPE 1050

Query: 173  GIP------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
              P      G  G +G KG  G+PG  GL G  G  G  G  G  G  G  G PG  G  
Sbjct: 1051 AKPGKIGENGKAGHKGSKGQQGHPGETGLMGEQGELGFVGQKGARGTIGPVGAPGSMGQQ 1110

Query: 227  GKDGIPG----------------------------TNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G+ G                              G+ G +G TGP GN+G+ G  G 
Sbjct: 1111 GDPGLAGYKGHMGPLGPLGPPGAKGEKGERGEDSEVEGSPGPQGDTGPSGNQGERGEPGD 1170

Query: 259  PG 260
            PG
Sbjct: 1171 PG 1172



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 50/105 (47%), Gaps = 18/105 (17%)

Query: 151 QGIPGDEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           +G PG    R PKG  G PG   P G PG  G++G KG           G  GLPGEPG 
Sbjct: 552 KGDPGLSPGRAPKGQKGEPGIVAPPGPPGHNGRKGQKGH---------SGPAGLPGEPG- 601

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                  G DG PG  G PG+ GIPG  G  GE G  G  G  GK
Sbjct: 602 -----DRGDDGSPGAKGYPGRQGIPGVRGKKGEMGRPGFAGIVGK 641


>gi|126310280|ref|XP_001371684.1| PREDICTED: collagen alpha-1(XXI) chain [Monodelphis domestica]
          Length = 957

 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/152 (46%), Positives = 87/152 (57%), Gaps = 3/152 (1%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G IGQKGEIG  G  G KG  G  G  GV G PG  G PG +G +G  G+ G  GP
Sbjct: 610 PGSRGLIGQKGEIGPPGPQGKKGAPGLNGLMGVEGSPGQPGTPGLKGNKGEPGNQGITGP 669

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            GI G++G  G  GD GYPG  G  G+    G  GE GL G  G NG  G PG+ G+PG+
Sbjct: 670 PGIKGEQGISGSPGDPGYPGLPGTPGKKGDSGNQGEKGLQGPKGENGRSGDPGQQGIPGQ 729

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G+ G  G  G +G+SG++G+ G
Sbjct: 730 HGAKGEKGEKGDPGSRGASGPKGESGMDGLIG 761



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 93/174 (53%), Gaps = 15/174 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGD 165
           PGL G  G+ G  G  G +G+   KG+ G++GAPG  G  G  GIPG  G RG    KG+
Sbjct: 562 PGLPGHSGEPGRDGKDGLIGIPGFKGDTGQQGAPGPEGQRGEPGIPGFPGSRGLIGQKGE 621

Query: 166 MGYPGPQG---IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           +G PGPQG    PG  G  G +G  G PG  GL G  G PG  G+ G PG  G  GI G 
Sbjct: 622 IGPPGPQGKKGAPGLNGLMGVEGSPGQPGTPGLKGNKGEPGNQGITGPPGIKGEQGISGS 681

Query: 223 DGLPGKDGIPGT------NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G PG  G+PGT      +G  GEKG+ GP+G  G+SG  G  G P     K E
Sbjct: 682 PGDPGYPGLPGTPGKKGDSGNQGEKGLQGPKGENGRSGDPGQQGIPGQHGAKGE 735



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 86/153 (56%), Gaps = 6/153 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G +G +G  G  G  G+KG +GE G  G+ GPP   GI G++G  G  GD GYP  
Sbjct: 634 PGLNGLMGVEGSPGQPGTPGLKGNKGEPGNQGITGPP---GIKGEQGISGSPGDPGYP-- 688

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G+PG  GK+G  G+ G  G  G  G +G  G+PG  GIPG++G  G  G+ G PG  G 
Sbjct: 689 -GLPGTPGKKGDSGNQGEKGLQGPKGENGRSGDPGQQGIPGQHGAKGEKGEKGDPGSRGA 747

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G +G  G+ GP G RG+ G  G  G P +
Sbjct: 748 SGPKGESGMDGLIGPIGPRGQHGETGPRGPPGL 780



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 86/176 (48%), Gaps = 15/176 (8%)

Query: 110 CPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           CPPG   LQGP G  G+ G  G  G  G+ G+ G  G+ G PG  G PG +G RG  G  
Sbjct: 446 CPPGKPGLQGPKGDPGQPGNHGYPGQPGQDGKPGYQGISGSPGIPGSPGIQGARGLPGYK 505

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------DGIPGRN 214
           G PG  GI GD G  G  G  G PG  G  G  G  G PG              G PG  
Sbjct: 506 GEPGRAGIKGDRGVPGFPGQHGMPGSKGEMGPRGEKGSPGFYGKKGAKGEKGNTGFPGLP 565

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G PG+DG  G  GIPG  G  G++G  GP G RG+ GI G PG+  +   K E
Sbjct: 566 GHSGEPGRDGKDGLIGIPGFKGDTGQQGAPGPEGQRGEPGIPGFPGSRGLIGQKGE 621



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 90/169 (53%), Gaps = 18/169 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGVVGPPGPQGIPGDEGKR 160
           G+ G  GQ G  G+KGEMG +GE+G  G              G  G PG  G PG +GK 
Sbjct: 518 GVPGFPGQHGMPGSKGEMGPRGEKGSPGFYGKKGAKGEKGNTGFPGLPGHSGEPGRDGKD 577

Query: 161 GPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRN 214
           G  G  G+ G    QG PG EG+RG  G  G+PG  GL G+ G    PG  G  G PG N
Sbjct: 578 GLIGIPGFKGDTGQQGAPGPEGQRGEPGIPGFPGSRGLIGQKGEIGPPGPQGKKGAPGLN 637

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G+ G+ G  G PG  G+ G  G  G +G+TGP G +G+ GI+G PG P 
Sbjct: 638 GLMGVEGSPGQPGTPGLKGNKGEPGNQGITGPPGIKGEQGISGSPGDPG 686



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 93/183 (50%), Gaps = 24/183 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG--- 152
           L+ + GF   T +   PG   P GQ+GE G  G  G +G  G+KG    +GPPGPQG   
Sbjct: 579 LIGIPGFKGDTGQQGAPG---PEGQRGEPGIPGFPGSRGLIGQKGE---IGPPGPQGKKG 632

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            PG  G  G +G  G PG  G+ G++G+ G +G  G PG  G  G  G PG+PG  G+PG
Sbjct: 633 APGLNGLMGVEGSPGQPGTPGLKGNKGEPGNQGITGPPGIKGEQGISGSPGDPGYPGLPG 692

Query: 213 RNGMDGIP---------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G                 G+ G PG+ GIPG +G  GEKG  G  G+RG SG  G
Sbjct: 693 TPGKKGDSGNQGEKGLQGPKGENGRSGDPGQQGIPGQHGAKGEKGEKGDPGSRGASGPKG 752

Query: 258 VPG 260
             G
Sbjct: 753 ESG 755



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 77/152 (50%), Gaps = 18/152 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L  + G   S  +   PGL+G  G+ G  G  G  G+KGE+G  G+PG  G PG  G PG
Sbjct: 636 LNGLMGVEGSPGQPGTPGLKGNKGEPGNQGITGPPGIKGEQGISGSPGDPGYPGLPGTPG 695

Query: 156 ---------DEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDG------ 197
                    ++G +GPKG+ G    PG QGIPG  G +G KG+ G PG  G  G      
Sbjct: 696 KKGDSGNQGEKGLQGPKGENGRSGDPGQQGIPGQHGAKGEKGEKGDPGSRGASGPKGESG 755

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            DGL G  G  G  G  G  G PG DG PG++
Sbjct: 756 MDGLIGPIGPRGQHGETGPRGPPGLDGKPGRE 787



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 85/233 (36%), Gaps = 83/233 (35%)

Query: 113 GLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           GLQGP G+ G  G  G+ G+      KGE+GEKG PG  G  GP+   G+ G  G  G +
Sbjct: 707 GLQGPKGENGRSGDPGQQGIPGQHGAKGEKGEKGDPGSRGASGPK---GESGMDGLIGPI 763

Query: 167 GYPGPQGIPGDEGKRGPKGDMG------------------------YPGRI--------- 193
           G  G  G  G  G  G  G  G                        + GR+         
Sbjct: 764 GPRGQHGETGPRGPPGLDGKPGREFSEQFIRQVCTDVLRAQLPVLLHSGRLQNCDHCQSQ 823

Query: 194 ----------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                                 GL GRDG+PG  G  G PG  G+ G PG++G  G DG 
Sbjct: 824 NGSPGLPGPPGPMGPEGPRGFPGLPGRDGVPGLMGTPGHPGARGIKGQPGRNGAKGNDGF 883

Query: 232 P-------------------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                                  G  GE G+ G  G+ G  GI G  G P IC
Sbjct: 884 GHPGEQGPPGPPGPEGPPGISKEGHPGEPGLPGKDGDPGNPGIQGPTGPPGIC 936


>gi|296208397|ref|XP_002751075.1| PREDICTED: collagen alpha-1(XXIV) chain [Callithrix jacchus]
          Length = 1713

 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 86/192 (44%), Positives = 101/192 (52%), Gaps = 36/192 (18%)

Query: 111  PPGLQGPIGQKGE------------IGAKGEMGVKGERGEKGAPG---------VVGPPG 149
            PPG QGP GQ+G              GAKGE GV+G+RG  G  G         V G PG
Sbjct: 915  PPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGVQGKRGPHGLTGKTGNPGERGVQGKPG 974

Query: 150  PQGIPG---------DEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDG 197
             QG+PG         + G RG +GD+G PG  GI   PG EG+ G +G+ G  G +GL G
Sbjct: 975  LQGLPGSTGDRGLVGEPGLRGLQGDVGPPGEMGIEGPPGTEGESGLQGEPGAKGEVGLAG 1034

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              G  GEPGL G PG  G +G+ GKDGL   PG  GIPG NG  GE G+ G  G  G SG
Sbjct: 1035 SVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGIPGENGEKGEMGLPGIIGPLGGSG 1094

Query: 255  INGVPGTPAICA 266
              G+PG   I  
Sbjct: 1095 QMGLPGPEGIVG 1106



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 91/158 (57%), Gaps = 6/158 (3%)

Query: 112  PGLQGPIGQK---GEIGAKGEMGVKGER---GEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL+G IGQ+   GE G +GE G+KGER   G KG  G  GP G  GIPG +G  GPKG 
Sbjct: 1232 PGLRGAIGQQGPPGEPGDQGEQGLKGERGSEGHKGKKGASGPSGKPGIPGLQGPPGPKGT 1291

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GY G  GI G+ GK G  G  G PG  G  GR GL G PG  G+ G +G+ G PG  G 
Sbjct: 1292 QGYYGADGISGNPGKVGSPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGVQGP 1351

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ G+ G  G  G++G  G +G++G  G  G+ G P 
Sbjct: 1352 KGEQGLHGQPGIQGKRGRRGAQGDQGPCGEPGLKGQPG 1389



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 106/213 (49%), Gaps = 39/213 (18%)

Query: 96   LVAMQGFCNSTKEYC---PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L  +QG      E     PPG +G  G +GE GAKGE+G+ G  G  G PG+ G PG   
Sbjct: 993  LRGLQGDVGPPGEMGIEGPPGTEGESGLQGEPGAKGEVGLAGSVGGTGEPGLRGEPG--- 1049

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDG 209
             PG+EG +G  G  G PG +GIPG+ G+   KG+MG PG I   G  G+ GLPG  G+ G
Sbjct: 1050 APGEEGLQGKDGLKGVPGGRGIPGENGE---KGEMGLPGIIGPLGGSGQMGLPGPEGIVG 1106

Query: 210  IPGRNGM------------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGP----- 246
            IPG+ G                    G PGK G  G  G  GT G  G  G+ GP     
Sbjct: 1107 IPGQRGRPGKKGDKGQVGPMGEVGSKGFPGKIGKSGPKGARGTRGAVGHLGLMGPEGEPG 1166

Query: 247  ----RGNRGKSGINGVPGTPAICAYKRESCSLL 275
                RG++G+ G++G+PG      Y  E  ++L
Sbjct: 1167 IPGYRGHQGQPGLSGLPGPKGEKGYPGEDSTVL 1199



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 105/226 (46%), Gaps = 52/226 (23%)

Query: 97   VAMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP--- 150
            V  +GF     +  P G +G    +G  G +G +GE G+ G RG +G PG+ G PGP   
Sbjct: 1129 VGSKGFPGKIGKSGPKGARGTRGAVGHLGLMGPEGEPGIPGYRGHQGQPGLSGLPGPKGE 1188

Query: 151  -------------------------QGIPGDEGKRGPKGDMGYPG---------PQGIPG 176
                                     QG  G+ G  G KG +G PG         P G PG
Sbjct: 1189 KGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRGAIGQQGPPGEPG 1248

Query: 177  DEGKRGPKGDMG---YPGRIGLDGRDGLPGEPGLDGIPG---------RNGMDGIPGKDG 224
            D+G++G KG+ G   + G+ G  G  G PG PGL G PG          +G+ G PGK G
Sbjct: 1249 DQGEQGLKGERGSEGHKGKKGASGPSGKPGIPGLQGPPGPKGTQGYYGADGISGNPGKVG 1308

Query: 225  LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             PGK G+PG  G+ G  G+ G  G  G  G +G+PG+P +   K E
Sbjct: 1309 SPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGVQGPKGE 1354



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 90/180 (50%), Gaps = 27/180 (15%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +GV G RG   ++G PG  G  G QG+ G+ G  G KG  G  GP
Sbjct: 1214 QGERGEPGAEGYKGHVGVPGLRGAIGQQGPPGEPGDQGEQGLKGERGSEGHKGKKGASGP 1273

Query: 172  QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G   IPG +G  GPKG  GY         PG++G  G+ GL   PG+ G PGR G+ G 
Sbjct: 1274 SGKPGIPGLQGPPGPKGTQGYYGADGISGNPGKVGSPGKQGL---PGIRGSPGRTGLAGA 1330

Query: 220  PGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G+ G  G+PG+ G  G K         G+ G RG RG  G  G  G P +     E
Sbjct: 1331 PGPPGVKGSSGLPGSPGVQGPKGEQGLHGQPGIQGKRGRRGAQGDQGPCGEPGLKGQPGE 1390



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 92/188 (48%), Gaps = 36/188 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------GPPGPQGI- 153
           GL GP G +G+ G KG  G+ G RGE+G PG+                   G PGP+GI 
Sbjct: 557 GLIGPPGMQGDKGLKGHPGLPGLRGEQGIPGLAGNIGSPGYPGRQGLAGPEGNPGPKGIR 616

Query: 154 -----PGDEGKRGPKGDMGYP---------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                PG+ G+ GP+G+ G P         G QG PGD G+RGP G  G PG +G  G  
Sbjct: 617 GFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGERGPAGLDGSPGLVGGTGPL 676

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGIN 256
           G PG  G  G  G  G  GIPG  GL G  G+PG  G  GE+G  G  G     G  G  
Sbjct: 677 GFPGLRGSVGPVGPVGSPGIPGPVGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAV 736

Query: 257 GVPGTPAI 264
           G+PG P +
Sbjct: 737 GLPGPPGM 744



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/189 (41%), Positives = 92/189 (48%), Gaps = 27/189 (14%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGA------------ 141
            V  QG      E  P GL G +G  G IG KGE G  G    +GEKG             
Sbjct: 841  VGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGP 900

Query: 142  ------PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                  PG VG  GP G  G +G+RGP+G  G  G QGI   +G +G KG  G  G  GL
Sbjct: 901  IGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGI---QGAKGEKGVQGKRGPHGL 957

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G+ G PGE G+ G PG  G+ G  G  GL   PG  G+ G  G  GE G+ GP G  G+
Sbjct: 958  TGKTGNPGERGVQGKPGLQGLPGSTGDRGLVGEPGLRGLQGDVGPPGEMGIEGPPGTEGE 1017

Query: 253  SGINGVPGT 261
            SG+ G PG 
Sbjct: 1018 SGLQGEPGA 1026



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 94/198 (47%), Gaps = 27/198 (13%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG   ST +    G  G  G +G++G  GEMG++G  G +G  G+ G PG +G  G  
Sbjct: 974  GLQGLPGSTGDRGLVGEPGLRGLQGDVGPPGEMGIEGPPGTEGESGLQGEPGAKGEVGLA 1033

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------- 210
            G  G  G+ G  G  G PG+EG +G  G  G PG  G+ G +G  GE GL GI       
Sbjct: 1034 GSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGIPGENGEKGEMGLPGIIGPLGGS 1093

Query: 211  -----PGRNGMDGIPGKDGLPGK---------------DGIPGTNGTNGEKGMTGPRGNR 250
                 PG  G+ GIPG+ G PGK                G PG  G +G KG  G RG  
Sbjct: 1094 GQMGLPGPEGIVGIPGQRGRPGKKGDKGQVGPMGEVGSKGFPGKIGKSGPKGARGTRGAV 1153

Query: 251  GKSGINGVPGTPAICAYK 268
            G  G+ G  G P I  Y+
Sbjct: 1154 GHLGLMGPEGEPGIPGYR 1171



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 92/167 (55%), Gaps = 21/167 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGLQG  G  G+ G  GE G++G +G+ G PG   + GPPG +G  G +G+ G KG++G 
Sbjct: 973  PGLQGLPGSTGDRGLVGEPGLRGLQGDVGPPGEMGIEGPPGTEGESGLQGEPGAKGEVGL 1032

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIP----- 220
             G  G  G+ G RG   + G PG  GL G+DGL G PG  GIPG NG     G+P     
Sbjct: 1033 AGSVGGTGEPGLRG---EPGAPGEEGLQGKDGLKGVPGGRGIPGENGEKGEMGLPGIIGP 1089

Query: 221  ----GKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                G+ GLPG +   GIPG  G  G+KG  G  G  G+ G  G PG
Sbjct: 1090 LGGSGQMGLPGPEGIVGIPGQRGRPGKKGDKGQVGPMGEVGSKGFPG 1136



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 94/204 (46%), Gaps = 45/204 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG++G  G KG  G  G+ G +G  G  G+PG+VG  GP G PG  G  GP G +G PG 
Sbjct: 637 PGIRGKKGFKGRQGFPGDFGERGPAGLDGSPGLVGGTGPLGFPGLRGSVGPVGPVGSPGI 696

Query: 171 -----------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD-- 217
                        GI GD+G++G  G++G PG  G  G  GLPG PG+ G PG +G    
Sbjct: 697 PGPVGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQTGD 756

Query: 218 -------------------GIPGKDGLPGKDGI---------PGTNGTNGEKGMTGPRGN 249
                              GIPG++G  G  G+         PG  GT GE+G  GP G 
Sbjct: 757 PGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGVLGNRGAPGPPGLKGTQGEEGPVGPFGE 816

Query: 250 ---RGKSGINGVPGTPAICAYKRE 270
              RGK G  G  G P     K E
Sbjct: 817 LGPRGKLGQKGYAGEPGPEGLKGE 840



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 78/152 (51%), Gaps = 9/152 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQGP G KG  G  G  G+ G  G+ G+PG  G PG +G PG  G  G  G  G  G 
Sbjct: 1280 PGLQGPPGPKGTQGYYGADGISGNPGKVGSPGKQGLPGIRGSPGRTGLAGAPGPPGVKGS 1339

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------EPGLDGIPGRNGMDGIPGK 222
             G+PG  G +GPKG+ G  G+ G+ G+ G  G         EPGL G PG  G+ G+ G 
Sbjct: 1340 SGLPGSPGVQGPKGEQGLHGQPGIQGKRGRRGAQGDQGPCGEPGLKGQPGEYGVQGLTGF 1399

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G PG  G  G  G  G  G  GP G  G +G
Sbjct: 1400 QGFPGPKGPEGDVGIVGISGPKGPIGQIGNTG 1431



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G      + GE+G++G  G++GPPG QG   D+G +G  G  G  G 
Sbjct: 526 PGLPGPKGPKGDPGFSPGQAIPGEKGDQGLFGLIGPPGMQG---DKGLKGHPGLPGLRGE 582

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QGIPG  G  G     GYPGR GL G +G PG  G+ G  G  G  G  G +G  G  GI
Sbjct: 583 QGIPGLAGNIG---SPGYPGRQGLAGPEGNPGPKGIRGFIGSPGEAGQLGPEGERGIPGI 639

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G +G  G  G RG +G++G PG
Sbjct: 640 RGKKGFKGRQGFPGDFGERGPAGLDGSPG 668



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 93/195 (47%), Gaps = 45/195 (23%)

Query: 111 PPGLQG------PIGQKGEIGAKGEM------------GVKGERGEKGAPGVVGPPGPQG 152
           PPGL+G      P+G  GE+G +G++            G+KGE G++G  G +G  GP G
Sbjct: 798 PPGLKGTQGEEGPVGPFGELGPRGKLGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVG 857

Query: 153 IPGD---EGKRGPKGDMGYPGPQG------------------------IPGDEGKRGPKG 185
           +PG+    G  G KG+ G PGP G                        +PG  G RGP G
Sbjct: 858 LPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG 917

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G  G+ G  G DGL GE G+ G  G  G+ G  G  GL GK G PG  G  G+ G+ G
Sbjct: 918 SQGPKGQRGPRGPDGLLGEQGIQGAKGEKGVQGKRGPHGLTGKTGNPGERGVQGKPGLQG 977

Query: 246 PRGNRGKSGINGVPG 260
             G+ G  G+ G PG
Sbjct: 978 LPGSTGDRGLVGEPG 992



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 95/225 (42%), Gaps = 42/225 (18%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGI 153
           +   G+        P G  GP G +G IG+ GE G  G  GE+G PG+ G     G QG 
Sbjct: 592 IGSPGYPGRQGLAGPEGNPGPKGIRGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGF 651

Query: 154 PGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLP-- 202
           PGD G+RGP G  G P      GP G PG  G  GP G +   G PG +GL G  GLP  
Sbjct: 652 PGDFGERGPAGLDGSPGLVGGTGPLGFPGLRGSVGPVGPVGSPGIPGPVGLSGNKGLPGI 711

Query: 203 ----------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN-------------- 238
                     GE G  G PG  G  G+PG  G+ GK G  G  G                
Sbjct: 712 KGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGPSGPPGPEGF 771

Query: 239 ----GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
               G  G  GP G +G  G  G PG P +   + E   + P  E
Sbjct: 772 PGDIGIPGQNGPEGPKGVLGNRGAPGPPGLKGTQGEEGPVGPFGE 816



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 82/171 (47%), Gaps = 18/171 (10%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           IG  G+ G +G  GV G RG  G PG+ G  G +G  G  G+ GP+G +G  G  G PG 
Sbjct: 775 IGIPGQNGPEGPKGVLGNRGAPGPPGLKGTQGEEGPVGPFGELGPRGKLGQKGYAGEPGP 834

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------ 231
           EG +G  GD G  G+IG  G  GLPGE G+ G  G  G  G PG  G  G+ G+      
Sbjct: 835 EGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGP 894

Query: 232 ------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                       PG  G  G  G  GP+G RG  G +G+ G   I   K E
Sbjct: 895 PGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGE 945



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 88/182 (48%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-------------------- 152
           GL G  G KGE G  GE+G  G  G+KGA G+ GPPG +G                    
Sbjct: 707 GLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGPSGPP 766

Query: 153 ----------IPGDEGKRGPKG---DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                     IPG  G  GPKG   + G PGP G+ G +G+ GP G  G  G  G  G+ 
Sbjct: 767 GPEGFPGDIGIPGQNGPEGPKGVLGNRGAPGPPGLKGTQGEEGPVGPFGELGPRGKLGQK 826

Query: 200 GLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  GEPG +G+ G  G  G  GK       GLPG+ G+ G+ G  GE+G  GP G +G+ 
Sbjct: 827 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEK 886

Query: 254 GI 255
           G+
Sbjct: 887 GV 888



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/132 (43%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------RGPKG 185
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q IPG++G             +G KG
Sbjct: 510 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAIPGEKGDQGLFGLIGPPGMQGDKG 569

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G+PG  GL G  G+PG  G  G PG  G  G+ G +G PG  GI G  G+ GE G  G
Sbjct: 570 LKGHPGLPGLRGEQGIPGLAGNIGSPGYPGRQGLAGPEGNPGPKGIRGFIGSPGEAGQLG 629

Query: 246 PRGNRGKSGING 257
           P G RG  GI G
Sbjct: 630 PEGERGIPGIRG 641



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 76/140 (54%), Gaps = 3/140 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
            PG++G  G+ G  GA G  GVKG  G  G+PGV GP G QG+   PG +GKRG +G  G 
Sbjct: 1316 PGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGVQGPKGEQGLHGQPGIQGKRGRRGAQGD 1375

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             GP G PG +G+ G  G  G  G  G  G  G  G+ G+ GI G  G  G  G  G  G+
Sbjct: 1376 QGPCGEPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDVGIVGISGPKGPIGQIGNTGPLGR 1435

Query: 229  DGIPGTNGTNGEKGMTGPRG 248
            DGI G  G  G +G  G RG
Sbjct: 1436 DGIIGPTGRIGPRGEKGFRG 1455



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/130 (41%), Positives = 67/130 (51%), Gaps = 15/130 (11%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPG 212
           KRGP+G  G  G  G+PG  G +GPKGD G+      PG  G  G  GL G PG+ G  G
Sbjct: 510 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAIPGEKGDQGLFGLIGPPGMQGDKG 569

Query: 213 RNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
             G  G+P   G+ G+PG  G  G+ G  G +G+ GP GN G  GI G  G+P       
Sbjct: 570 LKGHPGLPGLRGEQGIPGLAGNIGSPGYPGRQGLAGPEGNPGPKGIRGFIGSPG------ 623

Query: 270 ESCSLLPNSE 279
           E+  L P  E
Sbjct: 624 EAGQLGPEGE 633



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 3/83 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            G QGP G+ G  G  GE GV+G  G +G PG  GP G  GI G  G +GP G +G  GP 
Sbjct: 1374 GDQGPCGEPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDVGIVGISGPKGPIGQIGNTGPL 1433

Query: 172  --QGIPGDEGKRGPKGDMGYPGR 192
               GI G  G+ GP+G+ G+ G 
Sbjct: 1434 GRDGIIGPTGRIGPRGEKGFRGE 1456


>gi|354503641|ref|XP_003513889.1| PREDICTED: collagen alpha-1(XVII) chain-like [Cricetulus griseus]
          Length = 1391

 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 96/185 (51%), Gaps = 35/185 (18%)

Query: 112 PGLQGPIGQKG--------------EIGAKGEMGVKGE---------------RGEKGAP 142
           PG++GPIGQ+G                G KG+ G+ GE               RG  G+ 
Sbjct: 588 PGMEGPIGQRGLEGPMGPRGEPGPPGSGEKGDRGIAGEQGPPGLPGLPGSVGPRGPNGSA 647

Query: 143 GVVGPP---GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G  GPP   GPQG+ GD G  G KGD G  GP G  GD+G++GP+G  G PG  GL G  
Sbjct: 648 GPQGPPGSMGPQGLRGDVGLPGVKGDKGLVGPPGPKGDQGEKGPRGLTGEPGIRGLPGAV 707

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G PG  G  G  G +G  G  G+ GL   PG  G+PG +G  G+ G+TGP+G +G  G  
Sbjct: 708 GEPGAKGAMGPAGPDGQQGPRGEQGLTGMPGTRGLPGPSGDPGKPGVTGPQGPQGLPGSP 767

Query: 257 GVPGT 261
           G PGT
Sbjct: 768 GRPGT 772



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 86/154 (55%), Gaps = 18/154 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDM 166
           G +GP G  G  G  G MG +G RG+ G PGV      VGPPGP+   GD+G++GP+G  
Sbjct: 639 GPRGPNGSAGPQGPPGSMGPQGLRGDVGLPGVKGDKGLVGPPGPK---GDQGEKGPRGLT 695

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG +G+PG  G+ G KG M   G  G DG+ G  GE GL G+PG  G+   PG  G P
Sbjct: 696 GEPGIRGLPGAVGEPGAKGAM---GPAGPDGQQGPRGEQGLTGMPGTRGL---PGPSGDP 749

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           GK   PG  G  G +G+ G  G  G  G  G PG
Sbjct: 750 GK---PGVTGPQGPQGLPGSPGRPGTKGEPGAPG 780



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 85/184 (46%), Gaps = 32/184 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI-----------------PG 155
           GL G  G  G +G  G  G KG++G  G PG+ GP G +G+                  G
Sbjct: 559 GLPGTPGIPGPLGHPGPEGPKGQKGSIGDPGMEGPIGQRGLEGPMGPRGEPGPPGSGEKG 618

Query: 156 DEG---------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           D G                 GP+G  G  GPQG PG  G +G +GD+G PG  G  G  G
Sbjct: 619 DRGIAGEQGPPGLPGLPGSVGPRGPNGSAGPQGPPGSMGPQGLRGDVGLPGVKGDKGLVG 678

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG  G  G  G  G+ G PG  GLPG  G PG  G  G  G  G +G RG+ G+ G+PG
Sbjct: 679 PPGPKGDQGEKGPRGLTGEPGIRGLPGAVGEPGAKGAMGPAGPDGQQGPRGEQGLTGMPG 738

Query: 261 TPAI 264
           T  +
Sbjct: 739 TRGL 742



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/107 (44%), Positives = 54/107 (50%), Gaps = 9/107 (8%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI-- 153
           LV   G      E  P GL G  G +G  GA GE G KG  G  G  G  GP G QG+  
Sbjct: 676 LVGPPGPKGDQGEKGPRGLTGEPGIRGLPGAVGEPGAKGAMGPAGPDGQQGPRGEQGLTG 735

Query: 154 -PGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPKGDMGYPGRI 193
            PG  G  GP GD G P      GPQG+PG  G+ G KG+ G PGR+
Sbjct: 736 MPGTRGLPGPSGDPGKPGVTGPQGPQGLPGSPGRPGTKGEPGAPGRV 782


>gi|327276461|ref|XP_003222988.1| PREDICTED: collagen alpha-1(V) chain-like [Anolis carolinensis]
          Length = 1834

 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 89/167 (53%), Gaps = 9/167 (5%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G         P G QGPIG  G  G KG  GV+G +G KG  G  G PG     GD G 
Sbjct: 762 EGPSGEKGSQGPAGPQGPIGYPGPRGVKGADGVRGLKGTKGEKGEDGFPG---FKGDMGI 818

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------ 213
           +G +G++G PGP+G  G EG +G  G  G PG +G  G  G  G PGL G PGR      
Sbjct: 819 KGDRGEIGPPGPRGEDGPEGPKGRGGPNGEPGPLGPSGEKGKLGVPGLPGYPGRIGPKGS 878

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G PG +G  G  G PG  G  G++G TGPRG RG+ GI G PG
Sbjct: 879 TGFPGFPGANGEKGTRGTPGKPGPRGQRGPTGPRGERGQRGITGKPG 925



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 85/166 (51%), Gaps = 18/166 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGD 165
           PG QG  G +G IG  G+ G  G+ G  G PG  GPPG      P G  G +G  GP+G 
Sbjct: 720 PGAQGLPGPQGAIGPPGDKGPLGKPGLPGMPGADGPPGHPGKEGPSGEKGSQGPAGPQGP 779

Query: 166 MGYPGPQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           +GYPGP+G+ G +G RG    KG+ G  G  G  G  G+ G+ G  G PG  G DG  G 
Sbjct: 780 IGYPGPRGVKGADGVRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGP 839

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G +G PG  G +GEK         GK G+ G+PG P     K
Sbjct: 840 KGRGGPNGEPGPLGPSGEK---------GKLGVPGLPGYPGRIGPK 876



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 86/198 (43%), Gaps = 60/198 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEK---------------------GAPGVVGPPGP 150
           PG  GP G +G  G  G  G KG RG+                      G  G+ G PGP
Sbjct: 615 PGQTGPKGDRGFDGLAGLPGEKGHRGDSGPSGPPGAPGEDGDRGDDGEVGPRGLPGEPGP 674

Query: 151 QG---------------IPGDEGKRGPKGDMGY------------PGPQGIPGDEGKRGP 183
           +G               I G +G+ GPKG++G             PG QG+PG +G  GP
Sbjct: 675 RGLLGPKGPPGPSGPPGIAGMDGQSGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGP 734

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            GD G  G+            PGL G+PG +G  G PGK+G  G+ G  G  G  G  G 
Sbjct: 735 PGDKGPLGK------------PGLPGMPGADGPPGHPGKEGPSGEKGSQGPAGPQGPIGY 782

Query: 244 TGPRGNRGKSGINGVPGT 261
            GPRG +G  G+ G+ GT
Sbjct: 783 PGPRGVKGADGVRGLKGT 800



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 85/214 (39%), Gaps = 57/214 (26%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  G+ G++G +G  GV+G  G  G PG  G  G  G  G  G+ GPKGD G+ G
Sbjct: 569 PPGSTGIKGESGDMGPQGPRGVQGPPGPSGKPGRRGRAGSDGARGMPGQTGPKGDRGFDG 628

Query: 171 PQGIPGDEGKR------------------------GPKGDMGYPGR-------------- 192
             G+PG++G R                        GP+G  G PG               
Sbjct: 629 LAGLPGEKGHRGDSGPSGPPGAPGEDGDRGDDGEVGPRGLPGEPGPRGLLGPKGPPGPSG 688

Query: 193 ----IGLDGRDGLPG---------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                G+DG+ G  G                PG  G+PG  G  G PG  G  GK G+PG
Sbjct: 689 PPGIAGMDGQSGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGDKGPLGKPGLPG 748

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             G +G  G  G  G  G+ G  G  G      Y
Sbjct: 749 MPGADGPPGHPGKEGPSGEKGSQGPAGPQGPIGY 782



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 35/61 (57%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G IG KG  G  G  G  GE+G +G PG  GP G +G  G  G+RG +G  G PGP
Sbjct: 867 PGYPGRIGPKGSTGFPGFPGANGEKGTRGTPGKPGPRGQRGPTGPRGERGQRGITGKPGP 926

Query: 172 Q 172
           +
Sbjct: 927 K 927



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 31/48 (64%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            KG+ G KGE+G  G  G++GPPG QG  GD G  GP+G  G  G QGI
Sbjct: 1467 KGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGGSGAKGEQGI 1514



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 54/141 (38%), Gaps = 56/141 (39%)

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG----------------------- 206
           GP G  GD G+RGP      PGR GL G DGLPG PG                       
Sbjct: 500 GPMGPVGDPGERGP------PGRAGLPGADGLPGPPGTMLMLPFRFSGGGDGGSKGPMVS 553

Query: 207 ------------LDGIPGRNGMDGIPGKDGLPGKDGI---------------PGTNGTNG 239
                         G PG  G+ G  G  G  G  G+                G++G  G
Sbjct: 554 AQESQAQAILQQARGPPGSTGIKGESGDMGPQGPRGVQGPPGPSGKPGRRGRAGSDGARG 613

Query: 240 EKGMTGPRGNRGKSGINGVPG 260
             G TGP+G+RG  G+ G+PG
Sbjct: 614 MPGQTGPKGDRGFDGLAGLPG 634



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 56/144 (38%), Gaps = 53/144 (36%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEG----------------------------- 158
           G MG  G+ GE+G PG  G PG  G+PG  G                             
Sbjct: 500 GPMGPVGDPGERGPPGRAGLPGADGLPGPPGTMLMLPFRFSGGGDGGSKGPMVSAQESQA 559

Query: 159 ------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDG 200
                  RGP      PG  GI G+ G  GP+G  G              GR G DG  G
Sbjct: 560 QAILQQARGP------PGSTGIKGESGDMGPQGPRGVQGPPGPSGKPGRRGRAGSDGARG 613

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDG 224
           +PG+ G  G  G +G+ G+PG+ G
Sbjct: 614 MPGQTGPKGDRGFDGLAGLPGEKG 637


>gi|397665234|ref|YP_006506772.1| hypothetical protein LPO_2922 [Legionella pneumophila subsp.
           pneumophila]
 gi|395128645|emb|CCD06863.1| conserved exported protein of unknown function containing Collagen
           helix repeat [Legionella pneumophila subsp. pneumophila]
          Length = 535

 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 83/189 (43%), Positives = 101/189 (53%), Gaps = 36/189 (19%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRG 161
           E  P GL GP G +GE G +G  G KG++GE G  G+ GP       GPQG+PG +G RG
Sbjct: 88  EAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRG 147

Query: 162 ---------PKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPG 203
                    PKGD G  GPQG+PG +G R         GPKGD G  G  GL G  G PG
Sbjct: 148 EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDPG 207

Query: 204 EPGLDGIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRG 251
           E G  G+PG  G  G  G  GLP         G  G+PG  G  GE   +G+ GP+G+RG
Sbjct: 208 EAGPQGLPGPQGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRG 267

Query: 252 KSGINGVPG 260
           ++G  G+PG
Sbjct: 268 EAGPQGLPG 276



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/162 (47%), Positives = 93/162 (57%), Gaps = 12/162 (7%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL GP G +GE G +G  G KG++GE G  G+ GP G QG  G +G  GPKGD G
Sbjct: 73  EAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDQG 132

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  G+PG  G  G
Sbjct: 133 EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRG 192

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  GLPG  G PG  G    +G+ GP+G+RG++G  G+PG
Sbjct: 193 EAGPQGLPGPKGDPGEAGP---QGLPGPQGDRGEAGPQGLPG 231



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 101/198 (51%), Gaps = 13/198 (6%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      E  P GL GP G +GE G +G  G KG+RGE G  G+ GP G QG  G +
Sbjct: 198 GLPGPKGDPGEAGPQGLPGPQGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQ 257

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  GPKGD G  GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  
Sbjct: 258 GLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQ 317

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+PG  G  G  G  GLPG     G  G  G +G+ GP+G++G++G  G  G P      
Sbjct: 318 GLPGPKGDRGEAGPQGLPGPK---GDQGEAGPQGLPGPKGDKGETGAVGPQGIPGPKGEA 374

Query: 269 RESCSLLP-NSETSQLLI 285
            +    +P   ET Q+L 
Sbjct: 375 GDDGQGVPAGGETGQVLA 392



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/199 (42%), Positives = 102/199 (51%), Gaps = 36/199 (18%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQ 151
            + G      E  P GL GP G +GE G +G  G KG+RGE G  G+ GP       GPQ
Sbjct: 123 GLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQ 182

Query: 152 GIPGDEGKRG---------PKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRI 193
           G+PG +G RG         PKGD G  GPQG+PG +G R         GPKGD G  G  
Sbjct: 183 GLPGPKGDRGEAGPQGLPGPKGDPGEAGPQGLPGPQGDRGEAGPQGLPGPKGDRGEAGPQ 242

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNGE---K 241
           GL G  G  GE G  G+PG  G  G  G  GLP         G  G+PG  G  GE   +
Sbjct: 243 GLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQ 302

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G+ GP+G+RG++G  G+PG
Sbjct: 303 GLPGPKGDRGEAGPQGLPG 321



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 98/184 (53%), Gaps = 21/184 (11%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      E  P GL GP G +GE G +G  G KG+RGE G  G+ GP G +G  G +
Sbjct: 108 GLPGPKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQ 167

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  GPKGD G  GPQG+PG +G R         GPKGD G  G  GL G  G  GE G  
Sbjct: 168 GLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDPGEAGPQGLPGPQGDRGEAGPQ 227

Query: 209 GIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNGE---KGMTGPRGNRGKSGIN 256
           G+PG  G  G  G  GLP         G  G+PG  G  GE   +G+ GP+G+RG++G  
Sbjct: 228 GLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQ 287

Query: 257 GVPG 260
           G+PG
Sbjct: 288 GLPG 291



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/177 (44%), Positives = 96/177 (54%), Gaps = 27/177 (15%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRG 161
           E  P GL GP G +GE G +G  G KG+RGE G  G+ GP       GPQG+PG +G RG
Sbjct: 163 EAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDPGEAGPQGLPGPQGDRG 222

Query: 162 ---------PKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPG 203
                    PKGD G  GPQG+PG +G +         GPKGD G  G  GL G  G  G
Sbjct: 223 EAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRG 282

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           E G  G+PG  G  G  G  GLPG     G  G  G +G+ GP+G+RG++G  G+PG
Sbjct: 283 EAGPQGLPGPKGDRGEAGPQGLPGPK---GDRGEAGPQGLPGPKGDRGEAGPQGLPG 336



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/153 (46%), Positives = 87/153 (56%), Gaps = 12/153 (7%)

Query: 117 PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG 176
           P G +G  G KGE G KG+RGE G  G+ GP G +G  G +G  GPKGD G  GPQG+PG
Sbjct: 52  PSGPQGPKGDKGEAGSKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPG 111

Query: 177 DEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            +G +         GPKGD G  G  GL G  G  GE G  G+PG  G  G  G  GLPG
Sbjct: 112 PKGDQGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG 171

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                G  G  G +G+ GP+G+RG++G  G+PG
Sbjct: 172 PK---GDRGEAGPQGLPGPKGDRGEAGPQGLPG 201


>gi|402867397|ref|XP_003897839.1| PREDICTED: collagen alpha-1(IX) chain isoform 1 [Papio anubis]
          Length = 921

 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/192 (42%), Positives = 104/192 (54%), Gaps = 30/192 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIG 194
           A G+ G PGPQG+PG  G +G +G  G  GP+G  G +G RG      PKGD G PG   
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPGPKGDTGLPG--- 541

Query: 195 LDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           +DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  GP G
Sbjct: 542 VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGPMG 601

Query: 249 NRGKSGINGVPG 260
           N GK G  G PG
Sbjct: 602 NSGKPGQQGPPG 613



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 99/174 (56%), Gaps = 21/174 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 426 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 485

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQG+PG   D+G+RGP G+ G  G  G  G  G+PG      +PG  G  G+
Sbjct: 486 RGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPG------LPGPKGDTGL 539

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG DG   +DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  S
Sbjct: 540 PGVDG---RDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGS 590



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KGERG +GA G+ G P            GPKGD G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 599 PMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPG 640



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G RG  G  G+PG P 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPG 532



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 89/193 (46%), Gaps = 48/193 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PGP G  G  G++GP G++G  GP+
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGPMGNSGKPGQQGPPGEVGPRGPR 621

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PGR                   G+ G  G+ GEPG  G  G +
Sbjct: 622 GLPGSRGELGPVGSPGLPGRLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 681

Query: 215 GMD------------GIPGKDGLPGKDGIPGTNGTNGEKGM------------TGPRGNR 250
           G +            G+PG  G  G  G PG  G  G +G+             G +G +
Sbjct: 682 GEEGETGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQ 741

Query: 251 GKSGINGVPGTPA 263
           G +G+ GV G P 
Sbjct: 742 GATGLPGVQGPPG 754



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 92/229 (40%), Gaps = 78/229 (34%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE------------------- 138
            + G      +  PPG  GP G++G  GA+G  G+ G +G+                   
Sbjct: 496 GLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 555

Query: 139 --------------KGAPGVVGPPGPQGIPGDEG------KRGPKGDMGYPGPQGIPGDE 178
                         +G PGV G PG +G+ G++G      K GP G+ G PG QG PG+ 
Sbjct: 556 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEV 615

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEP------------------------GLDGIPGRN 214
           G RGP+G  G  G +G  G  GLPG                          G+ G PG  
Sbjct: 616 GPRGPRGLPGSRGELGPVGSPGLPGRLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPK 675

Query: 215 GMDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           G  G  G++            GLPG     G+ G  GE G+ GP G+RG
Sbjct: 676 GEQGASGEEGETGERGELGDIGLPGPK---GSAGNPGEPGLRGPEGSRG 721



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 76/179 (42%), Gaps = 60/179 (33%)

Query: 112 PGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G+   MG  G+ G++G PG VGP GP+G+PG  G+ GP G  G 
Sbjct: 579 PGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGL 638

Query: 169 P------------------------GPQGIPGDEGKRGPKG---------------DMGY 189
           P                        G +G+ G+ G +G +G               D+G 
Sbjct: 639 PGRLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGETGERGELGDIGL 698

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
           P   G  G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 P---GPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 47/93 (50%), Gaps = 24/93 (25%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-- 192
           + G +G PG+ GPPG  G+      RGPKGD+G                KG+ G PGR  
Sbjct: 812 QMGMRGLPGIKGPPGALGL------RGPKGDLGE---------------KGERGPPGRGP 850

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            GL G  GLPG+PG     GRNG DG  G  G+
Sbjct: 851 KGLPGAVGLPGDPGPASY-GRNGRDGERGPPGV 882



 Score = 39.3 bits (90), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 18/84 (21%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG +G PG  G RGPKGD+G               E G  G PGR G  G+PG  
Sbjct: 814 GMRGLPGIKGPPGALGLRGPKGDLG---------------EKGERGPPGR-GPKGLPGAV 857

Query: 224 GLPGKDGIP--GTNGTNGEKGMTG 245
           GLPG  G    G NG +GE+G  G
Sbjct: 858 GLPGDPGPASYGRNGRDGERGPPG 881


>gi|109071662|ref|XP_001111640.1| PREDICTED: collagen alpha-1(IX) chain-like isoform 2 [Macaca
           mulatta]
          Length = 921

 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/192 (42%), Positives = 104/192 (54%), Gaps = 30/192 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIG 194
           A G+ G PGPQG+PG  G +G +G  G  GP+G  G +G RG      PKGD G PG   
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPGPKGDTGLPG--- 541

Query: 195 LDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           +DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  GP G
Sbjct: 542 VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGPMG 601

Query: 249 NRGKSGINGVPG 260
           N GK G  G PG
Sbjct: 602 NSGKPGQQGPPG 613



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 99/174 (56%), Gaps = 21/174 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 426 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 485

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQG+PG   D+G+RGP G+ G  G  G  G  G+PG      +PG  G  G+
Sbjct: 486 RGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPG------LPGPKGDTGL 539

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG DG   +DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  S
Sbjct: 540 PGVDG---RDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGS 590



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KGERG +GA G+ G P            GPKGD G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 599 PMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPG 640



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G RG  G  G+PG P 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPG 532



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 73/145 (50%), Gaps = 6/145 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G++G  GA+G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 496 GLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 555

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG  G PG+ G  G  G PG+ G  G  
Sbjct: 556 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEV 615

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G  G+PG  G  G  G PG  G
Sbjct: 616 GPRGPRGLPGSRGELGPVGSPGLPG 640



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 89/193 (46%), Gaps = 48/193 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PGP G  G  G++GP G++G  GP+
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGPMGNSGKPGQQGPPGEVGPRGPR 621

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PG+                   G+ G  G+ GEPG  G  G +
Sbjct: 622 GLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 681

Query: 215 GMD------------GIPGKDGLPGKDGIPGTNGTNGEKGM------------TGPRGNR 250
           G +            G+PG  G  G  G PG  G  G +G+             G +G +
Sbjct: 682 GEEGETGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQ 741

Query: 251 GKSGINGVPGTPA 263
           G +G+ GV G P 
Sbjct: 742 GATGLPGVQGPPG 754



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 76/179 (42%), Gaps = 60/179 (33%)

Query: 112 PGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G+   MG  G+ G++G PG VGP GP+G+PG  G+ GP G  G 
Sbjct: 579 PGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGL 638

Query: 169 PGP------------------------QGIPGDEGKRGPKG---------------DMGY 189
           PG                         +G+ G+ G +G +G               D+G 
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGETGERGELGDIGL 698

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
           P   G  G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 P---GPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 47/93 (50%), Gaps = 24/93 (25%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-- 192
           + G +G PG+ GPPG  G+      RGPKGD+G                KG+ G PGR  
Sbjct: 812 QMGMRGLPGIKGPPGALGL------RGPKGDLGE---------------KGERGPPGRGP 850

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            GL G  GLPG+PG     GRNG DG  G  G+
Sbjct: 851 KGLPGAVGLPGDPGPASY-GRNGRDGERGPPGV 882



 Score = 39.3 bits (90), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 18/84 (21%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG +G PG  G RGPKGD+G               E G  G PGR G  G+PG  
Sbjct: 814 GMRGLPGIKGPPGALGLRGPKGDLG---------------EKGERGPPGR-GPKGLPGAV 857

Query: 224 GLPGKDGIP--GTNGTNGEKGMTG 245
           GLPG  G    G NG +GE+G  G
Sbjct: 858 GLPGDPGPASYGRNGRDGERGPPG 881


>gi|327282764|ref|XP_003226112.1| PREDICTED: collagen alpha-1(XXI) chain-like [Anolis carolinensis]
          Length = 956

 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/182 (43%), Positives = 93/182 (51%), Gaps = 27/182 (14%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           CPPG QGP G KG+ G  G  G  GE G  G PG  G  G  GIPG  G +GP+G    P
Sbjct: 446 CPPGKQGPPGSKGDPGLPGNHGYPGEPGPDGKPGYQGIAGTPGIPGSPGIQGPRG---LP 502

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPG------------------LD 208
           G +G PG +G +G +G  G+PG  G+    G  G  G+PG                    
Sbjct: 503 GMKGEPGLDGAKGERGLPGFPGLHGMPASKGDRGSKGDPGPPGIYGKKGAKGGKGDGGFP 562

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+PGR G  G  GKDGLPG   IPG  G +G+ G TGP G RG  GI G+PG   I   K
Sbjct: 563 GMPGRPGDPGRTGKDGLPG---IPGLKGEDGQPGSTGPEGRRGDPGIPGIPGMQGIKGEK 619

Query: 269 RE 270
            E
Sbjct: 620 GE 621



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 87/167 (52%), Gaps = 9/167 (5%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   +      PG+QGP G  G  G  G  G KGERG  G PG+       G+P  +G 
Sbjct: 481 QGIAGTPGIPGSPGIQGPRGLPGMKGEPGLDGAKGERGLPGFPGL------HGMPASKGD 534

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGM 216
           RG KGD G PG  G  G +G +G  G  G PGR G  GR   DGLPG PGL G  G+ G 
Sbjct: 535 RGSKGDPGPPGIYGKKGAKGGKGDGGFPGMPGRPGDPGRTGKDGLPGIPGLKGEDGQPGS 594

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G+ G PG  GIPG  G  GEKG  GP G  G +G  G PG P 
Sbjct: 595 TGPEGRRGDPGIPGIPGMQGIKGEKGEIGPPGQEGTNGSPGTPGLPG 641



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 81/160 (50%), Gaps = 27/160 (16%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  G  G  G+ G PG+ G  G  G PG  G  G +GD G PG   IPG +G +G KG++
Sbjct: 566 GRPGDPGRTGKDGLPGIPGLKGEDGQPGSTGPEGRRGDPGIPG---IPGMQGIKGEKGEI 622

Query: 188 GYPGRIGLDGRDGLPGEPG---------------------LDGIPGRNGMDG---IPGKD 223
           G PG+ G +G  G PG PG                     L G PG +G+ G    PG  
Sbjct: 623 GPPGQEGTNGSPGTPGLPGPEGSLGLPGGPGPKGSKGEQGLQGKPGPSGVKGEYGQPGTP 682

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G PG  GIPGT G  G+KG +G RG +GK G +G  G+P 
Sbjct: 683 GEPGYPGIPGTPGLKGDKGNSGERGFQGKKGESGRLGSPG 722



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 82/155 (52%), Gaps = 15/155 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------KGD 165
           PG+ G  G +G  G KGE+G  G+ G  G+PG  G PGP+G  G  G  GP      +G 
Sbjct: 604 PGIPGIPGMQGIKGEKGEIGPPGQEGTNGSPGTPGLPGPEGSLGLPGGPGPKGSKGEQGL 663

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G PGP G+ G+ G+ G  G+ GYP         G+PG PGL G  G +G  G  GK G 
Sbjct: 664 QGKPGPSGVKGEYGQPGTPGEPGYP---------GIPGTPGLKGDKGNSGERGFQGKKGE 714

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G PG  G  G  G  G +G +G  GI+G+ G
Sbjct: 715 SGRLGSPGHKGDMGSSGAKGEKGEKGDPGIHGING 749



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 75/177 (42%), Gaps = 60/177 (33%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------------VVGPPGP 150
           PG+QG  G+KGEIG  G+ G  G  G  G PG                     + G PGP
Sbjct: 610 PGMQGIKGEKGEIGPPGQEGTNGSPGTPGLPGPEGSLGLPGGPGPKGSKGEQGLQGKPGP 669

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------- 203
            G+ G+ G+ G  G+ GYPG  G PG +G +G  G+ G+ G+ G  GR G PG       
Sbjct: 670 SGVKGEYGQPGTPGEPGYPGIPGTPGLKGDKGNSGERGFQGKKGESGRLGSPGHKGDMGS 729

Query: 204 -----------EPGLDGIPGRNGMD---------------------GIPGKDGLPGK 228
                      +PG+ GI G+ G                       GIPG DG PG+
Sbjct: 730 SGAKGEKGEKGDPGIHGINGQKGEPGMGGLVGPPGPRGGQGERGSPGIPGSDGKPGR 786



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 31/97 (31%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN------------------ 235
           GL G DGLPG   L G PGR+G  G     GLPG++G  G+                   
Sbjct: 845 GLQGNDGLPG---LTGAPGRHGSRG---AKGLPGRNGAKGSQGIGLPGIPGPPGPPGPEG 898

Query: 236 -------GTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                  G  GE G  G  G RG  G+ G  G P IC
Sbjct: 899 PPGMSKEGRPGESGEPGKDGERGSPGMPGRTGPPGIC 935


>gi|363740415|ref|XP_415514.3| PREDICTED: collagen alpha-1(XXVII) chain [Gallus gallus]
          Length = 1745

 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 105/207 (50%), Gaps = 49/207 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG------------------ERGEKGAPGVV----GPPGP 150
            G  GP+G  G +GA+GE G+KG                  E+GE+G  G V    GPPG 
Sbjct: 1173 GTLGPMGAPGRMGAQGEPGLKGYQGHAGPPGPIGPPGPKGEKGEQGDDGKVEGPQGPPGD 1232

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------RGPKGDMGYPGR 192
            +G  GD G RG  GD GYPG +G+ G+ GK                  +G KGD+G  G+
Sbjct: 1233 RGPVGDRGDRGEPGDPGYPGQEGLDGERGKPGQQGLPGDPGPPGQPGAKGSKGDVGQKGK 1292

Query: 193  IGLDGRDGLPGEPGLDGIPG------RNGMDGIPGKDGLPGKDGIPGT---NGTNGEKGM 243
             G  G  G  G PG  G+PG      R G +G PG DG+PGKDG+PG     G +GE+G+
Sbjct: 1293 QGARGSAGSRGSPGTLGLPGPRGVVGRQGQEGAPGVDGVPGKDGVPGVLGEQGDDGEEGV 1352

Query: 244  TGPRGNRGKSGINGVPGTPAICAYKRE 270
            TG  G RG  G+ G+PG      +K E
Sbjct: 1353 TGMTGKRGNPGVPGLPGAQGPPGFKGE 1379



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 82/146 (56%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G KG++G KG+ G +G  G +G+PG +G PGP+G+ G +G+ G  G  G PG  G+PG  
Sbjct: 1282 GSKGDVGQKGKQGARGSAGSRGSPGTLGLPGPRGVVGRQGQEGAPGVDGVPGKDGVPGVL 1341

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G++G  G+ G  G  G  G  G+PG PG  G PG  G  G+PG+ G  GK G  G  G  
Sbjct: 1342 GEQGDDGEEGVTGMTGKRGNPGVPGLPGAQGPPGFKGERGLPGQTGQTGKRGSLGGMGLP 1401

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  GP+G  G  G  G PG   I
Sbjct: 1402 GSPGDPGPKGQPGDFGEAGFPGIAGI 1427



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 88/182 (48%), Gaps = 39/182 (21%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------------RGP 162
            +G  G  G+ G  G+RG++G PG  G PG +G+ G+ GK                  +G 
Sbjct: 1224 EGPQGPPGDRGPVGDRGDRGEPGDPGYPGQEGLDGERGKPGQQGLPGDPGPPGQPGAKGS 1283

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI--- 219
            KGD+G  G QG  G  G RG  G +G PG  G+ GR G  G PG+DG+PG++G+ G+   
Sbjct: 1284 KGDVGQKGKQGARGSAGSRGSPGTLGLPGPRGVVGRQGQEGAPGVDGVPGKDGVPGVLGE 1343

Query: 220  ------------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                              PG  GLPG  G PG  G  G  G TG  G RG  G  G+PG+
Sbjct: 1344 QGDDGEEGVTGMTGKRGNPGVPGLPGAQGPPGFKGERGLPGQTGQTGKRGSLGGMGLPGS 1403

Query: 262  PA 263
            P 
Sbjct: 1404 PG 1405



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 83/152 (54%), Gaps = 12/152 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G     G++G  GE G+ G+RGE G  G  GPPGP G  GD      KG+ G  G 
Sbjct: 1049 PGMKG---DPGQLGVPGEQGLIGQRGEMGLEGDSGPPGPDGAKGD------KGEQGLDGE 1099

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLPGK 228
            +G  G EG +G +G  GYPG  G+ G +G PG+ G  G PG+ G  G  G+    G PGK
Sbjct: 1100 KGEKGTEGLKGKEGPPGYPGITGVRGPEGKPGKQGEKGRPGQKGSKGYQGQLGETGPPGK 1159

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +G  G  G  G +G  GP G  G+ G  G PG
Sbjct: 1160 EGPKGNQGPKGSRGTLGPMGAPGRMGAQGEPG 1191



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/138 (44%), Positives = 78/138 (56%), Gaps = 9/138 (6%)

Query: 132  VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
            + GE G KG PG +G PG QG+ G  G+ G +GD G PGP G  GD+G++G  G+ G  G
Sbjct: 1045 LAGEPGMKGDPGQLGVPGEQGLIGQRGEMGLEGDSGPPGPDGAKGDKGEQGLDGEKGEKG 1104

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---------KG 242
              GL G++G PG PG+ G+ G  G  G  G+ G PG+ G  G  G  GE         KG
Sbjct: 1105 TEGLKGKEGPPGYPGITGVRGPEGKPGKQGEKGRPGQKGSKGYQGQLGETGPPGKEGPKG 1164

Query: 243  MTGPRGNRGKSGINGVPG 260
              GP+G+RG  G  G PG
Sbjct: 1165 NQGPKGSRGTLGPMGAPG 1182



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 80/146 (54%), Gaps = 24/146 (16%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMGY 189
           +GERG  G+PG  G PG QG+PG  G+ GPKG  GY   PG  G+PG +G+R   G  G 
Sbjct: 608 QGERGPAGSPGAKGYPGRQGLPGPIGEAGPKGSRGYIGLPGLFGLPGADGER---GIPGV 664

Query: 190 PGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGKDGL------------PGKDGI 231
           PG+ G  GR G PG+      PG+DG PG  G  G PG  GL            PG  G+
Sbjct: 665 PGKRGKMGRPGFPGDFGERGPPGIDGNPGELGAPGPPGVLGLIGDMGSVGPIGYPGPKGL 724

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  GE G+ G +G++G +G+ G
Sbjct: 725 KGLIGNPGEHGLKGDKGDQGGAGLPG 750



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 79/154 (51%), Gaps = 15/154 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GPIG+ G  G++G +G+ G         ERG  G PG  G  G  G PGD G+RGP 
Sbjct: 627 GLPGPIGEAGPKGSRGYIGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPGDFGERGPP 686

Query: 164 G------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G      ++G PGP G+ G  G  G  G +GYPG  GL G  G PGE GL G  G  G  
Sbjct: 687 GIDGNPGELGAPGPPGVLGLIGDMGSVGPIGYPGPKGLKGLIGNPGEHGLKGDKGDQGGA 746

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           G+PG  G  G  G  G  G  G +G  GP G  G
Sbjct: 747 GLPGDIGFQGDKGSHGLPGVPGARGKPGPVGKVG 780



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 77/144 (53%), Gaps = 15/144 (10%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEGKRGPKGD-- 165
           QKG+ G       +G +G+ G PG+ G PGP G  G            D+G+RGP G   
Sbjct: 559 QKGDPGLSPGKARRGPKGDVGLPGLTGFPGPPGRKGYKGYPGPPGHPGDQGERGPAGSPG 618

Query: 166 -MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             GYPG QG+PG  G+ GPKG  GY G  GL G  G  GE G+ G+PG+ G  G PG  G
Sbjct: 619 AKGYPGRQGLPGPIGEAGPKGSRGYIGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPG 678

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRG 248
             G+ G PG +G  GE G  GP G
Sbjct: 679 DFGERGPPGIDGNPGELGAPGPPG 702



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 94/199 (47%), Gaps = 42/199 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKG---- 164
            PG+ GP G  G  GA G  GVKG RG +G  G VG PG +G    PG+ GK GP G    
Sbjct: 926  PGIPGPAGPAGARGAPGIRGVKGRRGARGPDGPVGEPGSRGAKGRPGEPGKLGPDGLQGK 985

Query: 165  --DMGYPGPQGIPGDEGKRGPKG---------------------DMGY------PGRIGL 195
              + G  G +G PG +G  GP G                     ++G+       G+ GL
Sbjct: 986  MGETGETGSRGFPGIQGPSGPPGTKGAPGDPGPQGPQGPPGPLGEIGHKGPPGPMGQPGL 1045

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G  G+ G+PG  G+PG  G+ G  G+ GL G  G PG +G  G+KG  G  G +G+ G 
Sbjct: 1046 AGEPGMKGDPGQLGVPGEQGLIGQRGEMGLEGDSGPPGPDGAKGDKGEQGLDGEKGEKGT 1105

Query: 256  NGV------PGTPAICAYK 268
             G+      PG P I   +
Sbjct: 1106 EGLKGKEGPPGYPGITGVR 1124



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 94/222 (42%), Gaps = 45/222 (20%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           I L  + G   +  E   PG+ G  G+ G  G  G+ G +G  G  G PG +G PGP G+
Sbjct: 644 IGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPGDFGERGPPGIDGNPGELGAPGPPGV 703

Query: 154 PGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMG---YPGRIGLDG---RDGL 201
            G  G  G  G +GYPGP+G+      PG+ G +G KGD G    PG IG  G     GL
Sbjct: 704 LGLIGDMGSVGPIGYPGPKGLKGLIGNPGEHGLKGDKGDQGGAGLPGDIGFQGDKGSHGL 763

Query: 202 PGEPGLDGIPGR---------------------------------NGMDGIPGKDGLPGK 228
           PG PG  G PG                                   G  G PG  GLPG 
Sbjct: 764 PGVPGARGKPGPVGKVGDIGPMGFPGPPGPEGFPGDIGPPGENGPEGPKGKPGARGLPGP 823

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+PG  G  G  G  G  G+ G+ G  G PG P     K E
Sbjct: 824 RGLPGQEGDEGPLGPPGVPGSEGRPGRKGFPGRPGPDGPKGE 865



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 69/142 (48%), Gaps = 18/142 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK---------------GAPGVVGPPGPQGIPGD 156
            PG  G  G  G IG  GE G+ GE+G++               G PG+   PG  G PG 
Sbjct: 872  PGKVGEQGLMGFIGPVGEPGIVGEKGDRGSVGPPGPPGVKGSMGHPGI---PGAVGFPGI 928

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G  GP G  G PG +G+ G  G RGP G +G PG  G  GR G PG+ G DG+ G+ G 
Sbjct: 929  PGPAGPAGARGAPGIRGVKGRRGARGPDGPVGEPGSRGAKGRPGEPGKLGPDGLQGKMGE 988

Query: 217  DGIPGKDGLPGKDGIPGTNGTN 238
             G  G  G PG  G  G  GT 
Sbjct: 989  TGETGSRGFPGIQGPSGPPGTK 1010



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 60/123 (48%), Gaps = 21/123 (17%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLPG 203
           +RGPKGD+G PG  G PG  G++               G +G  G PG  G  GR GLPG
Sbjct: 571 RRGPKGDVGLPGLTGFPGPPGRKGYKGYPGPPGHPGDQGERGPAGSPGAKGYPGRQGLPG 630

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G  G  G+PG  GLPG D      G+PG  G  G  G  G  G RG  GI+G
Sbjct: 631 PIGEAGPKGSRGYIGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPGDFGERGPPGIDG 690

Query: 258 VPG 260
            PG
Sbjct: 691 NPG 693



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 77/177 (43%), Gaps = 39/177 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------GYPGPQGIPG 176
           +IG  GE    G  G KG PG  G PGP+G+PG EG  GP G        G PG +G PG
Sbjct: 799 DIGPPGE---NGPEGPKGKPGARGLPGPRGLPGQEGDEGPLGPPGVPGSEGRPGRKGFPG 855

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGL----------------------- 207
             G  GPKG+ G  GR G  G  GL       GEPG+                       
Sbjct: 856 RPGPDGPKGEPGNHGRPGKVGEQGLMGFIGPVGEPGIVGEKGDRGSVGPPGPPGVKGSMG 915

Query: 208 -DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             GIPG  G  GIPG  G  G  G PG  G  G +G  GP G  G+ G  G  G P 
Sbjct: 916 HPGIPGAVGFPGIPGPAGPAGARGAPGIRGVKGRRGARGPDGPVGEPGSRGAKGRPG 972



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 82/150 (54%), Gaps = 12/150 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------GK 159
            PG  G  G  GE G  GE GV G  G++G PGV G PG QG PG +            GK
Sbjct: 1332 PGKDGVPGVLGEQGDDGEEGVTGMTGKRGNPGVPGLPGAQGPPGFKGERGLPGQTGQTGK 1391

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            RG  G MG PG  G PG +G+ G  G+ G+PG  G+ G  G PG+PG  GI G  G  GI
Sbjct: 1392 RGSLGGMGLPGSPGDPGPKGQPGDFGEAGFPGIAGIFGPKGPPGDPGFKGIQGPRGPPGI 1451

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             GK+G+ G  GI G  G+ G KG  G RG+
Sbjct: 1452 MGKEGIIGPLGILGPTGSPGPKGDKGSRGD 1481



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 84/191 (43%), Gaps = 48/191 (25%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G         P G  GP G KG IG  GE G+KG++G++G           G+PGD G +
Sbjct: 705 GLIGDMGSVGPIGYPGPKGLKGLIGNPGEHGLKGDKGDQGG---------AGLPGDIGFQ 755

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKG---------------------DMGYPGRIGLDGRD 199
           G KG  G PG   +PG  GK GP G                     D+G PG    +G +
Sbjct: 756 GDKGSHGLPG---VPGARGKPGPVGKVGDIGPMGFPGPPGPEGFPGDIGPPGE---NGPE 809

Query: 200 GLPGEPGLDGIPGRNGMDGIPG------------KDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  G+PG  G+PG  G+ G  G             +G PG+ G PG  G +G KG  G  
Sbjct: 810 GPKGKPGARGLPGPRGLPGQEGDEGPLGPPGVPGSEGRPGRKGFPGRPGPDGPKGEPGNH 869

Query: 248 GNRGKSGINGV 258
           G  GK G  G+
Sbjct: 870 GRPGKVGEQGL 880



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 90/208 (43%), Gaps = 57/208 (27%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKG---------------------ERGEKGAPGVVGPPG 149
            PPG  GP G KG+ GA+G  G +G                       G KG PG  GP G
Sbjct: 802  PPGENGPEGPKGKPGARGLPGPRGLPGQEGDEGPLGPPGVPGSEGRPGRKGFPGRPGPDG 861

Query: 150  PQGIPGDE---GKRGPKGDMGYPGPQGIPGDEGKRGPK---------------------G 185
            P+G PG+    GK G +G MG+ GP G PG  G++G +                     G
Sbjct: 862  PKGEPGNHGRPGKVGEQGLMGFIGPVGEPGIVGEKGDRGSVGPPGPPGVKGSMGHPGIPG 921

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM------------DGIPGKDGLPGKDGIPG 233
             +G+PG  G  G  G  G PG+ G+ GR G              G  G+ G PGK G  G
Sbjct: 922  AVGFPGIPGPAGPAGARGAPGIRGVKGRRGARGPDGPVGEPGSRGAKGRPGEPGKLGPDG 981

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  GE G TG RG  G  G +G PGT
Sbjct: 982  LQGKMGETGETGSRGFPGIQGPSGPPGT 1009



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 89/199 (44%), Gaps = 57/199 (28%)

Query: 113  GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPG-- 155
            G +G +GQKG+ GA+G  G               V G +G++GAPGV G PG  G+PG  
Sbjct: 1282 GSKGDVGQKGKQGARGSAGSRGSPGTLGLPGPRGVVGRQGQEGAPGVDGVPGKDGVPGVL 1341

Query: 156  ----DEG---------KRGPKGDMGYPGPQGIP------------GDEGKRGPKGDMGYP 190
                D+G         KRG  G  G PG QG P            G  GKRG  G MG P
Sbjct: 1342 GEQGDDGEEGVTGMTGKRGNPGVPGLPGAQGPPGFKGERGLPGQTGQTGKRGSLGGMGLP 1401

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGM------------DGIPGKDGLP---GKDGIPGTN 235
            G  G  G  G PG+ G  G PG  G+             GI G  G P   GK+GI G  
Sbjct: 1402 GSPGDPGPKGQPGDFGEAGFPGIAGIFGPKGPPGDPGFKGIQGPRGPPGIMGKEGIIGPL 1461

Query: 236  GTNGEKGMTGPRGNRGKSG 254
            G  G  G  GP+G++G  G
Sbjct: 1462 GILGPTGSPGPKGDKGSRG 1480


>gi|395534436|ref|XP_003769247.1| PREDICTED: collagen alpha-1(IX) chain [Sarcophilus harrisii]
          Length = 949

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 99/174 (56%), Gaps = 27/174 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKGDMGY 168
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPGPQG+ G  G  G KGD G 
Sbjct: 454 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGITGIVGAKGDKGA 513

Query: 169 ------PGPQGI---PGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGM 216
                 PGPQG+   PGD+G+RGP G+ G  G  G+ G    +GLPG  G +G+PG +G 
Sbjct: 514 RGLDGEPGPQGLPGAPGDQGQRGPLGETGPKGDRGVQGPRGINGLPGPKGENGLPGVDGR 573

Query: 217 DGIPGKDGLP------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           DGIPG  G              G+ G+PG  G+ G KG+ G +GN G  G+ GV
Sbjct: 574 DGIPGMPGSKGEPGKPGPPGDVGRQGLPGLPGSPGAKGVAGEKGNTGAPGVPGV 627



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 107/208 (51%), Gaps = 48/208 (23%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G                +G+KG
Sbjct: 453 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGITGIVGAKGDKG 512

Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+RGP      KGD G  GP+GI    G  GPKG+ G P 
Sbjct: 513 ARGLDGEPGPQGLPGAPGDQGQRGPLGETGPKGDRGVQGPRGI---NGLPGPKGENGLP- 568

Query: 192 RIGLDGRDGLPGEP------------------GLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             G+DGRDG+PG P                  GL G+PG  G  G+ G+ G  G  G+PG
Sbjct: 569 --GVDGRDGIPGMPGSKGEPGKPGPPGDVGRQGLPGLPGSPGAKGVAGEKGNTGAPGVPG 626

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G +G+ G  GP+G  G  G  G+PG+
Sbjct: 627 VMGNSGKPGQQGPQGEVGPRGPRGLPGS 654



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 76/150 (50%), Gaps = 15/150 (10%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKG 164
           E  P GL G  G +G+ G  GE G KG+RG +G  G+ G PGP    G+PG +G+     
Sbjct: 519 EPGPQGLPGAPGDQGQRGPLGETGPKGDRGVQGPRGINGLPGPKGENGLPGVDGR----- 573

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                   GIPG  G +G  G  G PG +G  G  GLPG PG  G+ G  G  G PG  G
Sbjct: 574 -------DGIPGMPGSKGEPGKPGPPGDVGRQGLPGLPGSPGAKGVAGEKGNTGAPGVPG 626

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           + G  G PG  G  GE G  GPRG  G  G
Sbjct: 627 VMGNSGKPGQQGPQGEVGPRGPRGLPGSRG 656



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 87/199 (43%), Gaps = 50/199 (25%)

Query: 112 PGLQGPIGQKGEIGAKG-----------------------EMGVKGERGEKGAP------ 142
           PG  GP GQKGE G  G                       E+G  G  G+ G        
Sbjct: 362 PGAVGPRGQKGEPGVPGSRGFPGRGIPGPPGPPGASGLPGELGRVGPSGDPGRRGPPGPP 421

Query: 143 ------GVVG------------PPGPQ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
                 G +G            PPG     G+PG  G +G KG++G PG QG  G+EG +
Sbjct: 422 GPPGPSGTIGFHDGDPLCPNSCPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQ 481

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G  G++G  G  G  G  G+ G  G  G  G  G+DG PG  GLPG  G  G  G  GE 
Sbjct: 482 GELGEVGAQGPPGPQGLRGITGIVGAKGDKGARGLDGEPGPQGLPGAPGDQGQRGPLGET 541

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G  G RG +G  GING+PG
Sbjct: 542 GPKGDRGVQGPRGINGLPG 560



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 88/208 (42%), Gaps = 57/208 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QG  G  G  GAKG   V GE+G  GAPGV   PG  G  G  G++GP+G++G  GP+
Sbjct: 596 GRQGLPGLPGSPGAKG---VAGEKGNTGAPGV---PGVMGNSGKPGQQGPQGEVGPRGPR 649

Query: 173 GIPGDEGK---------------------------------RGPKGDMGYPGRIGLDGRD 199
           G+PG  G+                                 +G +G +G PG  G  GR 
Sbjct: 650 GLPGSRGELGPSGPPGSPGKLGPSGSPGLPGLPGPPGLPGLKGDRGSVGEPGPKGEQGRA 709

Query: 200 ---------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                          GLPG  G  G PG  G  G  G  GLP   G+ G+ G  G +GM 
Sbjct: 710 GEEGEAGGKGELGDIGLPGPKGSVGNPGEPGSRGPEGSRGLP---GVEGSRGPPGPRGMQ 766

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRESC 272
           G RG  G  GI G  G      + ++ C
Sbjct: 767 GERGATGLPGIQGPAGRAPTDQHIKQVC 794



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 84/220 (38%), Gaps = 72/220 (32%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGPQGIPGDE 157
           GL GP G+ G  G  G  G+ G               + G +G PG+ G PG +G+ G++
Sbjct: 557 GLPGPKGENGLPGVDGRDGIPGMPGSKGEPGKPGPPGDVGRQGLPGLPGSPGAKGVAGEK 616

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIG-------------------- 194
           G  G  G  G  G  G PG +G +   GP+G  G PG  G                    
Sbjct: 617 GNTGAPGVPGVMGNSGKPGQQGPQGEVGPRGPRGLPGSRGELGPSGPPGSPGKLGPSGSP 676

Query: 195 -------------LDGRDGLPGEPGLD---------------------GIPGRNGMDGIP 220
                        L G  G  GEPG                       G+PG  G  G P
Sbjct: 677 GLPGLPGPPGLPGLKGDRGSVGEPGPKGEQGRAGEEGEAGGKGELGDIGLPGPKGSVGNP 736

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G  G +G  G  G  G +G  GPRG +G+ G  G+PG
Sbjct: 737 GEPGSRGPEGSRGLPGVEGSRGPPGPRGMQGERGATGLPG 776



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 72/183 (39%), Gaps = 72/183 (39%)

Query: 112 PGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEG---------- 158
           PG +G  G+KG  GA G    MG  G+ G++G  G VGP GP+G+PG  G          
Sbjct: 607 PGAKGVAGEKGNTGAPGVPGVMGNSGKPGQQGPQGEVGPRGPRGLPGSRGELGPSGPPGS 666

Query: 159 --------------------------------KRGPKG------------------DMGY 168
                                           + GPKG                  D+G 
Sbjct: 667 PGKLGPSGSPGLPGLPGPPGLPGLKGDRGSVGEPGPKGEQGRAGEEGEAGGKGELGDIGL 726

Query: 169 PGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           PGP+G    PG+ G RGP+G  G PG       +G  G PG  G+ G  G  G+PG  G 
Sbjct: 727 PGPKGSVGNPGEPGSRGPEGSRGLPGV------EGSRGPPGPRGMQGERGATGLPGIQGP 780

Query: 226 PGK 228
            G+
Sbjct: 781 AGR 783



 Score = 39.7 bits (91), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 12/74 (16%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG +G  G KG PG +G  GP+G  G+ G+RGP  +G  G PG  G+PGD G       
Sbjct: 840 QMGPRGLPGLKGPPGDLGLRGPKGDLGERGERGPPGRGPKGLPGSIGLPGDPG------- 892

Query: 187 MGYPGRIGLDGRDG 200
              P   G +GRDG
Sbjct: 893 ---PASYGKEGRDG 903



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 41/78 (52%), Gaps = 24/78 (30%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG      D G RGPKGD+G  G +G PG    RGPKG    PG IG
Sbjct: 840 QMGPRGLPGLKGPPG------DLGLRGPKGDLGERGERGPPG----RGPKG---LPGSIG 886

Query: 195 L-----------DGRDGL 201
           L           +GRDG 
Sbjct: 887 LPGDPGPASYGKEGRDGE 904


>gi|328721916|ref|XP_001942763.2| PREDICTED: collagen alpha-2(I) chain-like [Acyrthosiphon pisum]
          Length = 1757

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/166 (45%), Positives = 92/166 (55%), Gaps = 18/166 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           GLQGP G+ G+ G  GE G+ G       +GEKG+PG  GP GP G PG  G  G  G +
Sbjct: 664 GLQGPRGESGKSGESGEPGIPGTPGKDGNQGEKGSPGASGPIGPSGFPGPRGAPGETGSV 723

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------------GEPGLDGIPGRN 214
           G PG +G  G  G+RG KG+ G  G  G  G  GLP            G  G  G+PG  
Sbjct: 724 GPPGIKGADGLNGERGYKGEAGIKGETGAPGPRGLPGIDGPEGKRGRKGSEGPRGLPGIQ 783

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  GIPG+ GLPG DG PGT G+ G++G+ GP G++G  G  G PG
Sbjct: 784 GERGIPGERGLPGPDGSPGTKGSLGDRGLEGPPGSKGAVGDTGRPG 829



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 103/252 (40%), Gaps = 75/252 (29%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPG------- 149
           +G    T    PPG++G  G  GE G KGE G+KGE G    +G PG+ GP G       
Sbjct: 714 RGAPGETGSVGPPGIKGADGLNGERGYKGEAGIKGETGAPGPRGLPGIDGPEGKRGRKGS 773

Query: 150 --PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             P+G+PG +G+RG  G+ G PGP G PG +G  G +G  G PG  G  G  G PG  GL
Sbjct: 774 EGPRGLPGIQGERGIPGERGLPGPDGSPGTKGSLGDRGLEGPPGSKGAVGDTGRPGMTGL 833

Query: 208 D---------------------GIPGRNGMDGIPG------------------------- 221
                                 GIPG +G  G PG                         
Sbjct: 834 QGLSGSIGKPGPPGKSGPPGERGIPGADGKVGEPGPPGLQGLPGPIGPPGDKGLTGVTGA 893

Query: 222 -----------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                            K+G PG  GIPG  G +GE+G  GP G+ G  G+ GVPG P  
Sbjct: 894 AGEVGPPGAPGPRGDSGKEGPPGNAGIPGKPGLDGERGAVGPPGSIGSQGVPGVPGNPGQ 953

Query: 265 CAYKRESCSLLP 276
                E     P
Sbjct: 954 PGKDGEQGQQGP 965



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 84/170 (49%), Gaps = 18/170 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMGY 168
            PG QG  G  G  G +G  G KGE G  GA G VGP GPQG  G+ G  G    +G MG 
Sbjct: 1212 PGKQGVPGNVGAPGLRGLDGPKGETGADGASGPVGPIGPQGAVGERGLTGVPGSQGPMGM 1271

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGL---------------DGRDGLPGEPGLDGIPGR 213
             G QG+PGD+G  G  G  G  G  GL               DG  GLPG PG+ G PG 
Sbjct: 1272 RGTQGLPGDKGSPGKPGSDGSQGVQGLAGPPGSPGPQGERGQDGATGLPGAPGISGRPGD 1331

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G PG  G PG  G+ G  G  G  G  G RG RG++G  GV G P 
Sbjct: 1332 KGPPGSPGNLGSPGSPGMIGPQGLPGPTGNPGERGLRGENGPQGVEGPPG 1381



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G  G  G+ G+ GERG  G PG +G  G  G+PG+ G+ G  G+ G  GP G  G+ 
Sbjct: 913  GPPGNAGIPGKPGLDGERGAVGPPGSIGSQGVPGVPGNPGQPGKDGEQGQQGPAGKHGEA 972

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G RG +G  G  G IG  G  G+ GEPG+ G  G  G+ GI G  G  G  G+ G  G  
Sbjct: 973  GTRGERGFPGERGPIGHSGLQGVKGEPGVAGPDGPTGLQGIRGDKGHSGSPGLMGIPGLR 1032

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            GE+G+ G +G RG +G  G  G+P     +
Sbjct: 1033 GEQGLPGLKGERGSTGTQGPSGSPGPAGER 1062



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 99/192 (51%), Gaps = 24/192 (12%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERG---EKGAPGVVGPPGPQGIP 154
            G   ++    P G QG +G++G  G   ++G MG++G +G   +KG+PG  G  G QG+ 
Sbjct: 1237 GADGASGPVGPIGPQGAVGERGLTGVPGSQGPMGMRGTQGLPGDKGSPGKPGSDGSQGVQ 1296

Query: 155  G------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G            + G+ G  G  G PG  G PGD+G  G  G++G PG  G+ G  GLP
Sbjct: 1297 GLAGPPGSPGPQGERGQDGATGLPGAPGISGRPGDKGPPGSPGNLGSPGSPGMIGPQGLP 1356

Query: 203  ---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGIN 256
               G PG  G+ G NG  G+ G  G  GK G PG  G  G+KG  GP   +G++G  G+ 
Sbjct: 1357 GPTGNPGERGLRGENGPQGVEGPPGQRGKAGPPGVQGEKGDKGDIGPEGMKGHKGLMGLQ 1416

Query: 257  GVPGTPAICAYK 268
            G+PG P     K
Sbjct: 1417 GLPGAPGADGQK 1428



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 86/184 (46%), Gaps = 24/184 (13%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QGF  S      PGL+G  G  G  G +G  G  G+ GE G PG +G  GP+G  GD+
Sbjct: 1108 GVQGFPGSPGSVGMPGLKGDRGDTGMKGDQGNTGPMGKMGESGLPGAMGLIGPKGSRGDQ 1167

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGP------------------KGDMGYPGRIGLDGRD 199
            G    KGDMG     GIPG  G+RGP                  KG  G PG+ G+ G  
Sbjct: 1168 GN---KGDMGL---MGIPGRVGERGPMGYPGSTGPPGPPGLVGAKGWQGEPGKQGVPGNV 1221

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            G PG  GLDG  G  G DG  G  G  G  G  G  G  G  G  GP G RG  G+ G  
Sbjct: 1222 GAPGLRGLDGPKGETGADGASGPVGPIGPQGAVGERGLTGVPGSQGPMGMRGTQGLPGDK 1281

Query: 260  GTPA 263
            G+P 
Sbjct: 1282 GSPG 1285



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 86/178 (48%), Gaps = 27/178 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------------------GVVGPP--- 148
           G QG IG+KG IG+ G+ G+ G  G  GA                      G +GPP   
Sbjct: 577 GEQGAIGEKGSIGSPGQPGITGSVGPIGARGERGREGPPGPPGIRGADGLHGAIGPPGNI 636

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G  G PG  G  G KGD+G PGP+   G+ G  G+ G  G+ G PG  G  G+DG  GE 
Sbjct: 637 GKAGPPGFPGSVGAKGDVGLPGPKGSFGLQGPRGESGKSGESGEPGIPGTPGKDGNQGEK 696

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G  G PG  G PG+ G  G  G  G  G+ G RG +G++GI G  G P 
Sbjct: 697 GSPGASGPIGPSGFPGPRGAPGETGSVGPPGIKGADGLNGERGYKGEAGIKGETGAPG 754



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 87/201 (43%), Gaps = 36/201 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD--------------- 156
           PG+ G  G KG IG  G  G KGE+G  G  G +G PG  GI G                
Sbjct: 555 PGMPGIPGMKGHIGFPGIDGAKGEQGAIGEKGSIGSPGQPGITGSVGPIGARGERGREGP 614

Query: 157 ------------EGKRGPKGDMGYPGPQGIPGDEGKR------GPKGDMGYPGRIGLDGR 198
                        G  GP G++G  GP G PG  G +      GPKG  G  G  G  G+
Sbjct: 615 PGPPGIRGADGLHGAIGPPGNIGKAGPPGFPGSVGAKGDVGLPGPKGSFGLQGPRGESGK 674

Query: 199 DGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  GEPG+ G PG++   G  G PG  G  G  G PG  G  GE G  GP G +G  G+
Sbjct: 675 SGESGEPGIPGTPGKDGNQGEKGSPGASGPIGPSGFPGPRGAPGETGSVGPPGIKGADGL 734

Query: 256 NGVPGTPAICAYKRESCSLLP 276
           NG  G       K E+ +  P
Sbjct: 735 NGERGYKGEAGIKGETGAPGP 755



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 90/193 (46%), Gaps = 39/193 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG---------------------ERGEKGAPGVVGPPGPQ 151
            GL+GP G KG +G  G  G+ G                     ERG  GA G VG PGP 
Sbjct: 811  GLEGPPGSKGAVGDTGRPGMTGLQGLSGSIGKPGPPGKSGPPGERGIPGADGKVGEPGPP 870

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPG------------DEGKRGPKGDMGYPGRIGLDGRD 199
            G+ G  G  GP GD G  G  G  G            D GK GP G+ G PG+ GLDG  
Sbjct: 871  GLQGLPGPIGPPGDKGLTGVTGAAGEVGPPGAPGPRGDSGKEGPPGNAGIPGKPGLDGER 930

Query: 200  GL---PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGNRGKS 253
            G    PG  G  G+PG  G  G PGKDG  G+ G  G +   GT GE+G  G RG  G S
Sbjct: 931  GAVGPPGSIGSQGVPGVPGNPGQPGKDGEQGQQGPAGKHGEAGTRGERGFPGERGPIGHS 990

Query: 254  GINGVPGTPAICA 266
            G+ GV G P +  
Sbjct: 991  GLQGVKGEPGVAG 1003



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 93/192 (48%), Gaps = 30/192 (15%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPG 149
            L  ++G         P GLQG  G KG  G+ G MG+ G RGE+G PG+       G  G
Sbjct: 992  LQGVKGEPGVAGPDGPTGLQGIRGDKGHSGSPGLMGIPGLRGEQGLPGLKGERGSTGTQG 1051

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------------------GPKGDMG 188
            P G PG  G+RGP+G +G  GP G P + G+                      GP+G  G
Sbjct: 1052 PSGSPGPAGERGPQGFVGPIGPPGEPAERGEPGSTGPPGEPGAPGTPGERGSFGPQGVQG 1111

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            +PG  G  G  GL G+ G  G+ G  G  G  GK    G+ G+PG  G  G KG  G +G
Sbjct: 1112 FPGSPGSVGMPGLKGDRGDTGMKGDQGNTGPMGKM---GESGLPGAMGLIGPKGSRGDQG 1168

Query: 249  NRGKSGINGVPG 260
            N+G  G+ G+PG
Sbjct: 1169 NKGDMGLMGIPG 1180



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 82/170 (48%), Gaps = 27/170 (15%)

Query: 131 GVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GERG   E G PG +GP GP+G+PG  G  G KG +G+PG  G  G++G  G KG +
Sbjct: 529 GRDGERGHDAEPGQPGTIGPAGPRGLPGMPGIPGMKGHIGFPGIDGAKGEQGAIGEKGSI 588

Query: 188 GYPGRIGLDGR------------------------DGLPGEPGLDGIPGRNGMDGIPGKD 223
           G PG+ G+ G                         DGL G  G  G  G+ G  G PG  
Sbjct: 589 GSPGQPGITGSVGPIGARGERGREGPPGPPGIRGADGLHGAIGPPGNIGKAGPPGFPGSV 648

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           G  G  G+PG  G+ G +G  G  G  G+SG  G+PGTP     + E  S
Sbjct: 649 GAKGDVGLPGPKGSFGLQGPRGESGKSGESGEPGIPGTPGKDGNQGEKGS 698



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 88/189 (46%), Gaps = 27/189 (14%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------------MGVKGERGEKGAPGV 144
                G   +  E   PG +GPIG  G  G KGE             G++G++G  G+PG+
Sbjct: 966  AGKHGEAGTRGERGFPGERGPIGHSGLQGVKGEPGVAGPDGPTGLQGIRGDKGHSGSPGL 1025

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG- 203
            +G PG +G  G  G +G +G  G  GP G PG  G+RGP+G +G  G  G     G PG 
Sbjct: 1026 MGIPGLRGEQGLPGLKGERGSTGTQGPSGSPGPAGERGPQGFVGPIGPPGEPAERGEPGS 1085

Query: 204  --------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                          E G  G  G  G  G PG  G+PG  G  G  G  G++G TGP G 
Sbjct: 1086 TGPPGEPGAPGTPGERGSFGPQGVQGFPGSPGSVGMPGLKGDRGDTGMKGDQGNTGPMGK 1145

Query: 250  RGKSGINGV 258
             G+SG+ G 
Sbjct: 1146 MGESGLPGA 1154



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 81/169 (47%), Gaps = 30/169 (17%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP---------G 170
            ++G  G +G  G  G  G  G PG+ G  G  G+ GD+G  GP G MG           G
Sbjct: 1100 ERGSFGPQGVQGFPGSPGSVGMPGLKGDRGDTGMKGDQGNTGPMGKMGESGLPGAMGLIG 1159

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIG------------------LDGRDGLPGEPGLDGIPG 212
            P+G  GD+G +G  G MG PGR+G                  L G  G  GEPG  G+PG
Sbjct: 1160 PKGSRGDQGNKGDMGLMGIPGRVGERGPMGYPGSTGPPGPPGLVGAKGWQGEPGKQGVPG 1219

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G    PG  GL G  G  G +G +G  G  GP+G  G+ G+ GVPG+
Sbjct: 1220 NVGA---PGLRGLDGPKGETGADGASGPVGPIGPQGAVGERGLTGVPGS 1265



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/185 (38%), Positives = 82/185 (44%), Gaps = 24/185 (12%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            +  QG          PG  G  GQ+G  G  GE G +GERG  G  G +G  G QG+ G+
Sbjct: 939  IGSQGVPGVPGNPGQPGKDGEQGQQGPAGKHGEAGTRGERGFPGERGPIGHSGLQGVKGE 998

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G  GP G  G    QGI GD+G  G  G MG PG   L G  GLPG  G  G  G  G 
Sbjct: 999  PGVAGPDGPTGL---QGIRGDKGHSGSPGLMGIPG---LRGEQGLPGLKGERGSTGTQGP 1052

Query: 217  DGIPGKDGLPGKDGI------PGTNGTNGEKGMTGP------------RGNRGKSGINGV 258
             G PG  G  G  G       PG     GE G TGP            RG+ G  G+ G 
Sbjct: 1053 SGSPGPAGERGPQGFVGPIGPPGEPAERGEPGSTGPPGEPGAPGTPGERGSFGPQGVQGF 1112

Query: 259  PGTPA 263
            PG+P 
Sbjct: 1113 PGSPG 1117



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 77/162 (47%), Gaps = 21/162 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+ G  GQ G+ G +G+ G  G+ GE G  G  G PG +G  G  G +G KG+ G  GP
Sbjct: 945  PGVPGNPGQPGKDGEQGQQGPAGKHGEAGTRGERGFPGERGPIGHSGLQGVKGEPGVAGP 1004

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G  G +G RG KG  G PG +G+         PGL             G+ GLPG  G 
Sbjct: 1005 DGPTGLQGIRGDKGHSGSPGLMGI---------PGLR------------GEQGLPGLKGE 1043

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
             G+ GT G  G  GP G RG  G  G  G P   A + E  S
Sbjct: 1044 RGSTGTQGPSGSPGPAGERGPQGFVGPIGPPGEPAERGEPGS 1085



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 77/160 (48%), Gaps = 27/160 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
            GL G  G  G  G KG  G  G  G  G+PG++GP   PGP G PG+ G RG  G  G  
Sbjct: 1318 GLPGAPGISGRPGDKGPPGSPGNLGSPGSPGMIGPQGLPGPTGNPGERGLRGENGPQGVE 1377

Query: 170  GP------QGIPGDEGKRGPKGDMG---YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GP       G PG +G++G KGD+G     G  GL G  GLPG PG DG  G NG  G P
Sbjct: 1378 GPPGQRGKAGPPGVQGEKGDKGDIGPEGMKGHKGLMGLQGLPGAPGADGQKGNNGYPGPP 1437

Query: 221  GKD---------------GLPGKDGIPGTNGTNGEKGMTG 245
            G                 GLPG  G PG  G  GE+G  G
Sbjct: 1438 GPVGEPGPKGPPGQDGSPGLPGLMGQPGPRGLTGERGPDG 1477



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 76/156 (48%), Gaps = 33/156 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG------------ERGEKGAPGVVGPPGPQGIPGDEGKR 160
            GL G  G  G+ G+ G  GV+G            ERG+ GA G+ G PG  G PGD+G  
Sbjct: 1276 GLPGDKGSPGKPGSDGSQGVQGLAGPPGSPGPQGERGQDGATGLPGAPGISGRPGDKGPP 1335

Query: 161  GPKGDMGYPG------PQGIPGD---------EGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  G++G PG      PQG+PG           G+ GP+G  G PG+ G  G  G+ GE 
Sbjct: 1336 GSPGNLGSPGSPGMIGPQGLPGPTGNPGERGLRGENGPQGVEGPPGQRGKAGPPGVQGEK 1395

Query: 206  G------LDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            G       +G+ G  G+ G+ G  G PG DG  G N
Sbjct: 1396 GDKGDIGPEGMKGHKGLMGLQGLPGAPGADGQKGNN 1431



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 60/137 (43%), Gaps = 27/137 (19%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S     P GL GP G  GE G +GE G +G  G  G  G  GPPG QG  GD+G  
Sbjct: 1342 GSPGSPGMIGPQGLPGPTGNPGERGLRGENGPQGVEGPPGQRGKAGPPGVQGEKGDKGDI 1401

Query: 161  GP---KGDMGYPGPQGIPGDEGKRGPKGD------------------------MGYPGRI 193
            GP   KG  G  G QG+PG  G  G KG+                         G PG +
Sbjct: 1402 GPEGMKGHKGLMGLQGLPGAPGADGQKGNNGYPGPPGPVGEPGPKGPPGQDGSPGLPGLM 1461

Query: 194  GLDGRDGLPGEPGLDGI 210
            G  G  GL GE G DGI
Sbjct: 1462 GQPGPRGLTGERGPDGI 1478



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 43/73 (58%)

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG +G+RG   + G PG IG  G  GLPG PG+ G+ G  G  GI G  G  G  G  
Sbjct: 526 GLPGRDGERGHDAEPGQPGTIGPAGPRGLPGMPGIPGMKGHIGFPGIDGAKGEQGAIGEK 585

Query: 233 GTNGTNGEKGMTG 245
           G+ G+ G+ G+TG
Sbjct: 586 GSIGSPGQPGITG 598


>gi|301786543|ref|XP_002928686.1| PREDICTED: collagen alpha-1(X) chain-like [Ailuropoda melanoleuca]
 gi|281340789|gb|EFB16373.1| hypothetical protein PANDA_018678 [Ailuropoda melanoleuca]
          Length = 674

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/152 (47%), Positives = 88/152 (57%), Gaps = 12/152 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GPIG  G  GAKGE G  G  G+ G    PG +GP GP+G+PG++G  GPKG+MG  
Sbjct: 308 GQRGPIGLPGSPGAKGEQGPAGHPGQPGLTGPPGNIGPQGPKGMPGNQGIPGPKGEMGPV 367

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G PG +G+R         G  GLDG+ G PGEPG +G  G  G+ G  G  G+ G  
Sbjct: 368 GPAGHPGAKGER---------GSSGLDGKPGYPGEPGSNGPKGNPGLPGPKGDAGVRGPP 418

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G+PG  G  G KGM G  G  G  G  G+PGT
Sbjct: 419 GLPGLVGPAGAKGMPGHSGETGPRGAPGIPGT 450



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 83/160 (51%), Gaps = 17/160 (10%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-----------------PQGIPGDEGKR 160
           IG+ G  GA G+ G+ G +G  GAPG+ GPPG                 P G+PG  G +
Sbjct: 263 IGKPGATGAPGQPGIPGTKGHPGAPGIAGPPGAPSFGKPGLPGLKGQRGPIGLPGSPGAK 322

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G +G  G+PG  G+ G  G  GP+G  G PG  G+ G  G  G  G  G PG  G  G  
Sbjct: 323 GEQGPAGHPGQPGLTGPPGNIGPQGPKGMPGNQGIPGPKGEMGPVGPAGHPGAKGERGSS 382

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G DG PG  G PG+NG  G  G+ GP+G+ G  G  G+PG
Sbjct: 383 GLDGKPGYPGEPGSNGPKGNPGLPGPKGDAGVRGPPGLPG 422



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 73/141 (51%), Gaps = 6/141 (4%)

Query: 97  VAMQGFCNSTKEYCP---PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           + + G   +  E  P   PG  G  G  G IG +G  G+ G +G  G  G +GP GP G 
Sbjct: 313 IGLPGSPGAKGEQGPAGHPGQPGLTGPPGNIGPQGPKGMPGNQGIPGPKGEMGPVGPAGH 372

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG +G+RG  G  G P   G PG+ G  GPKG+ G PG  G  G  G PG PGL G  G 
Sbjct: 373 PGAKGERGSSGLDGKP---GYPGEPGSNGPKGNPGLPGPKGDAGVRGPPGLPGLVGPAGA 429

Query: 214 NGMDGIPGKDGLPGKDGIPGT 234
            GM G  G+ G  G  GIPGT
Sbjct: 430 KGMPGHSGETGPRGAPGIPGT 450


>gi|291227105|ref|XP_002733527.1| PREDICTED: fibrillar collagen [Saccoglossus kowalevskii]
          Length = 2341

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 92/187 (49%), Gaps = 18/187 (9%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQ------KGEIGAKGEMGVKGERGEKGAPGVVGPPG 149
            +   QG    T +  P GL GP G+      +GE G++G  G +GE G  G  G  GP G
Sbjct: 1295 MKGAQGPTGLTGDSGPRGLPGPAGEDGRRGERGEPGSQGTPGPQGEMGAAGVRGFPGPSG 1354

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            P G  G+ G+ G  G +G  G  G  GD G+ GP+G  G  G  G  G+ G+PG  GL G
Sbjct: 1355 PAGAKGESGEPGRPGPIGSKGSSGNTGDSGEIGPQGGKGTTGDPGRAGQQGMPGARGLTG 1414

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------------TGPRGNRGKSGING 257
             PG+ G  G PG  G PGKDG PG  G  G +G             TGPRG  G+ G  G
Sbjct: 1415 SPGKEGPSGRPGTPGEPGKDGDPGPAGARGARGESGKDGDAGPVGPTGPRGPAGERGATG 1474

Query: 258  VPGTPAI 264
              G+P  
Sbjct: 1475 ATGSPGF 1481



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/156 (46%), Positives = 90/156 (57%), Gaps = 3/156 (1%)

Query: 111  PPGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            P G QGP G  G+    G +G  G+KG+RG  G+PG  G  GP G PG  G+ GP+G  G
Sbjct: 1880 PRGDQGPEGVSGKDGIPGVQGRPGIKGDRGNTGSPGPAGMSGPMGAPGPSGEAGPQGPTG 1939

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             PGP G  G EG RG +G  G PG  G  G  G+ G  G  G  G  G+ GIPG  G+PG
Sbjct: 1940 DPGPSGPVGPEGARGSRGPSGEPGIAGAPGDAGIQGARGAKGHRGFPGLQGIPGSMGVPG 1999

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            +DG+ G  G NG +G TGPRG+ G +G +G  G P 
Sbjct: 2000 EDGMTGPPGPNGPRGATGPRGSPGLNGKDGPMGQPG 2035



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 95/187 (50%), Gaps = 33/187 (17%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDE 157
            GF   T +   PGL G  GQ GE G +GE G  G+   RGE+G PG  G  GP+G  G  
Sbjct: 1480 GFVGQTGQ---PGLPGEPGQPGEQGVQGEAGPAGQIGPRGERGQPGERGTAGPRGERGTR 1536

Query: 158  GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G++GP      KG+ G+PG +G PG  GK   KGD G+ G  G DG  G  G  G+ G  
Sbjct: 1537 GEQGPAGLDGSKGERGHPGERGTPGPNGK---KGDRGFQGAAGSDGAKGSSGPKGVRGEG 1593

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT------------------GPRGNRGKS 253
            G  G+ G+PG  GL G  G  G  G  GE+G+T                  GP+G++G+ 
Sbjct: 1594 GPQGLQGLPGPAGLTGATGAKGDRGETGERGVTGAPGKPGDRGSPGPMGISGPQGSQGEK 1653

Query: 254  GINGVPG 260
            G  G PG
Sbjct: 1654 GQTGAPG 1660



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/158 (46%), Positives = 79/158 (50%), Gaps = 6/158 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYP 169
            GL GP G  G  GAKG+ G  GERG  GAPG     G PGP GI G +G +G KG  G P
Sbjct: 1600 GLPGPAGLTGATGAKGDRGETGERGVTGAPGKPGDRGSPGPMGISGPQGSQGEKGQTGAP 1659

Query: 170  GP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            GP    G  GD G+ GP G  G  G  G  GR G  G  G DG PG  G  G PG+ G  
Sbjct: 1660 GPLGQSGPRGDTGETGPAGRPGPQGLAGPQGRPGSTGRAGRDGKPGAKGDSGDPGEQGDR 1719

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G  G  G KG  GP G  G  G+ G  G P  
Sbjct: 1720 GDPGPLGPRGIPGAKGDRGPAGRPGPQGLAGAGGRPGA 1757



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 82/157 (52%), Gaps = 9/157 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G++G  G +G  G+ G +GE+G PG  G PGP G  GD G +G  G  G  G  
Sbjct: 1525 GTAGPRGERGTRGEQGPAGLDGSKGERGHPGERGTPGPNGKKGDRGFQGAAGSDGAKGSS 1584

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  G  G+ GP+G  G PG  GL G  G  G+ G  G  G  G  G PG  G PG  GI 
Sbjct: 1585 GPKGVRGEGGPQGLQGLPGPAGLTGATGAKGDRGETGERGVTGAPGKPGDRGSPGPMGIS 1644

Query: 233  GTNGTNGEKGMT---------GPRGNRGKSGINGVPG 260
            G  G+ GEKG T         GPRG+ G++G  G PG
Sbjct: 1645 GPQGSQGEKGQTGAPGPLGQSGPRGDTGETGPAGRPG 1681



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/156 (45%), Positives = 83/156 (53%), Gaps = 3/156 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G +G  G+ G  G KGE G +GAPG  G  G  G+PG  G+RGP G  G  GP
Sbjct: 1818 PGLPGPQGAQGSRGSMGMPGQKGESGPRGAPGPQGEDGKTGLPGISGERGPVGPSGPLGP 1877

Query: 172  QGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            QG  GD+G  G  G  G P   GR G+ G  G  G PG  G+ G  G  G  G+ G  G 
Sbjct: 1878 QGPRGDQGPEGVSGKDGIPGVQGRPGIKGDRGNTGSPGPAGMSGPMGAPGPSGEAGPQGP 1937

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G PG +G  G +G  G RG  G+ GI G PG   I
Sbjct: 1938 TGDPGPSGPVGPEGARGSRGPSGEPGIAGAPGDAGI 1973



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/164 (44%), Positives = 83/164 (50%), Gaps = 12/164 (7%)

Query: 112  PGLQGPIGQKGEIGA---------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG QG  G +GE+GA          G  G KGE GE G PG +G  G  G  GD G+ GP
Sbjct: 1329 PGSQGTPGPQGEMGAAGVRGFPGPSGPAGAKGESGEPGRPGPIGSKGSSGNTGDSGEIGP 1388

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI--- 219
            +G  G  G  G  G +G  G +G  G PG+ G  GR G PGEPG DG PG  G  G    
Sbjct: 1389 QGGKGTTGDPGRAGQQGMPGARGLTGSPGKEGPSGRPGTPGEPGKDGDPGPAGARGARGE 1448

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             GKDG  G  G  G  G  GE+G TG  G+ G  G  G PG P 
Sbjct: 1449 SGKDGDAGPVGPTGPRGPAGERGATGATGSPGFVGQTGQPGLPG 1492



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 81/152 (53%), Gaps = 12/152 (7%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKR---GPKGDMGY 168
            QGP+G +G     GE G  G+ GE GA G+ GP   PGP+G PG +G     GPKG  G 
Sbjct: 1233 QGPMGARG---LPGERGRPGQSGEAGAAGLPGPQGFPGPRGAPGPQGSNGATGPKGSQGN 1289

Query: 169  PGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            PG  G+ G +G  G  GD    G PG  G DGR G  GEPG  G PG  G  G  G  G 
Sbjct: 1290 PGVAGMKGAQGPTGLTGDSGPRGLPGPAGEDGRRGERGEPGSQGTPGPQGEMGAAGVRGF 1349

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  G  G  G +GE G  GP G++G SG  G
Sbjct: 1350 PGPSGPAGAKGESGEPGRPGPIGSKGSSGNTG 1381



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 77/156 (49%), Gaps = 3/156 (1%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E  P GLQG  G  G  GA G  G +GE GE+G  G  G PG +G PG  G  GP+G  G
Sbjct: 1592 EGGPQGLQGLPGPAGLTGATGAKGDRGETGERGVTGAPGKPGDRGSPGPMGISGPQGSQG 1651

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
              G  G PG  G+ GP+GD G  G  G  G  GL G  G  G  GR G DG PG     G
Sbjct: 1652 EKGQTGAPGPLGQSGPRGDTGETGPAGRPGPQGLAGPQGRPGSTGRAGRDGKPGAK---G 1708

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G PG  G  G+ G  GPRG  G  G  G  G P 
Sbjct: 1709 DSGDPGEQGDRGDPGPLGPRGIPGAKGDRGPAGRPG 1744



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 88/182 (48%), Gaps = 36/182 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G++G  GV G +G +G  G+ G  GP+G+PG  G+ G +G+ G PG 
Sbjct: 1272 PGPQGSNGATGPKGSQGNPGVAGMKGAQGPTGLTGDSGPRGLPGPAGEDGRRGERGEPGS 1331

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP-------------------------- 205
            QG PG +G+ G  G  G+PG  G  G  G  GEP                          
Sbjct: 1332 QGTPGPQGEMGAAGVRGFPGPSGPAGAKGESGEPGRPGPIGSKGSSGNTGDSGEIGPQGG 1391

Query: 206  ----------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                      G  G+PG  G+ G PGK+G  G+ G PG  G +G+ G  G RG RG+SG 
Sbjct: 1392 KGTTGDPGRAGQQGMPGARGLTGSPGKEGPSGRPGTPGEPGKDGDPGPAGARGARGESGK 1451

Query: 256  NG 257
            +G
Sbjct: 1452 DG 1453



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 6/154 (3%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMG 167
            P G +GP G++G  GA G  G  G+ G+ G PG  G PG QG+ G+    G+ GP+G+ G
Sbjct: 1460 PTGPRGPAGERGATGATGSPGFVGQTGQPGLPGEPGQPGEQGVQGEAGPAGQIGPRGERG 1519

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             PG +G  G  G+RG +G+    G  GLDG  G  G PG  G PG NG  G  G  G  G
Sbjct: 1520 QPGERGTAGPRGERGTRGEQ---GPAGLDGSKGERGHPGERGTPGPNGKKGDRGFQGAAG 1576

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             DG  G++G  G +G  GP+G +G  G  G+ G 
Sbjct: 1577 SDGAKGSSGPKGVRGEGGPQGLQGLPGPAGLTGA 1610



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 85/164 (51%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            +  QG   +T +    G QG  G +G  G+ G+ G  G  G  G PG  G PGP G  G 
Sbjct: 1386 IGPQGGKGTTGDPGRAGQQGMPGARGLTGSPGKEGPSGRPGTPGEPGKDGDPGPAGARGA 1445

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G+ G  GD G  GP G  G  G+RG  G  G PG +G  G+ GLPGEPG  G  G  G 
Sbjct: 1446 RGESGKDGDAGPVGPTGPRGPAGERGATGATGSPGFVGQTGQPGLPGEPGQPGEQGVQGE 1505

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+ G  G+ G PG  GT G +G  G RG +G +G++G  G
Sbjct: 1506 AGPAGQIGPRGERGQPGERGTAGPRGERGTRGEQGPAGLDGSKG 1549



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 81/161 (50%), Gaps = 18/161 (11%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-------------- 164
            G  G  GAKG  G KG RGE G  G+ G PGP G+ G  G +G +G              
Sbjct: 1573 GAAGSDGAKGSSGPKGVRGEGGPQGLQGLPGPAGLTGATGAKGDRGETGERGVTGAPGKP 1632

Query: 165  -DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---DGIP 220
             D G PGP GI G +G +G KG  G PG +G  G  G  GE G  G PG  G+    G P
Sbjct: 1633 GDRGSPGPMGISGPQGSQGEKGQTGAPGPLGQSGPRGDTGETGPAGRPGPQGLAGPQGRP 1692

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G+DG PG  G +G+ G  G RG+ G  G  G+PG 
Sbjct: 1693 GSTGRAGRDGKPGAKGDSGDPGEQGDRGDPGPLGPRGIPGA 1733



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 96/213 (45%), Gaps = 66/213 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G+ G+ GAKG+ G  GE+G++G PG   P GP+GIPG +G RGP    G PGP
Sbjct: 1692 PGSTGRAGRDGKPGAKGDSGDPGEQGDRGDPG---PLGPRGIPGAKGDRGP---AGRPGP 1745

Query: 172  QGI------------------------------------------PGDEGKRGPKGDMGY 189
            QG+                                          PGD+G  GP+G  G 
Sbjct: 1746 QGLAGAGGRPGATGTTGPAGAKGAAGAPGTAGAKGEPGESGEQGRPGDQGLEGPEGPYGP 1805

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------ 243
             G  G DG+DG PG PG  G  G  G  G+PG+ G  G  G PG  G +G+ G+      
Sbjct: 1806 KGDAGKDGKDGEPGLPGPQGAQGSRGSMGMPGQKGESGPRGAPGPQGEDGKTGLPGISGE 1865

Query: 244  ------------TGPRGNRGKSGINGVPGTPAI 264
                         GPRG++G  G++G  G P +
Sbjct: 1866 RGPVGPSGPLGPQGPRGDQGPEGVSGKDGIPGV 1898



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 86/173 (49%), Gaps = 9/173 (5%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            +  +G   +T +    G QG  G  G+ G  G+ G+ G RG  G+PG  GP G  G PG+
Sbjct: 1371 IGSKGSSGNTGDSGEIGPQGGKGTTGDPGRAGQQGMPGARGLTGSPGKEGPSGRPGTPGE 1430

Query: 157  EGK---------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             GK         RG +G+ G  G  G  G  G RGP G+ G  G  G  G  G  G+PGL
Sbjct: 1431 PGKDGDPGPAGARGARGESGKDGDAGPVGPTGPRGPAGERGATGATGSPGFVGQTGQPGL 1490

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+ G  G+ G+ G  G+ G  G  G  GE+G  GPRG RG  G  G  G
Sbjct: 1491 PGEPGQPGEQGVQGEAGPAGQIGPRGERGQPGERGTAGPRGERGTRGEQGPAG 1543



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 90/205 (43%), Gaps = 57/205 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------GKR 160
            G QG  G+KG+ GA G +G  G RG+ G  G  G PGPQG+ G +            GK 
Sbjct: 1645 GPQGSQGEKGQTGAPGPLGQSGPRGDTGETGPAGRPGPQGLAGPQGRPGSTGRAGRDGKP 1704

Query: 161  GPKGDMGYP------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------- 201
            G KGD G P            GP+GIPG +G RGP G  G  G  G  GR G        
Sbjct: 1705 GAKGDSGDPGEQGDRGDPGPLGPRGIPGAKGDRGPAGRPGPQGLAGAGGRPGATGTTGPA 1764

Query: 202  -----------------PGEPGLDGIPGRNGMDGI---------PGKDGLPGKDGIPGTN 235
                             PGE G  G PG  G++G           GKDG  G+ G+PG  
Sbjct: 1765 GAKGAAGAPGTAGAKGEPGESGEQGRPGDQGLEGPEGPYGPKGDAGKDGKDGEPGLPGPQ 1824

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G +G  G  G +G+SG  G PG
Sbjct: 1825 GAQGSRGSMGMPGQKGESGPRGAPG 1849



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 89/179 (49%), Gaps = 27/179 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
            PG  G  G+ G+ G  G  G +GE G+ G  G VGP GP+G  G+ G  G  G  G+   
Sbjct: 1425 PGTPGEPGKDGDPGPAGARGARGESGKDGDAGPVGPTGPRGPAGERGATGATGSPGFVGQ 1484

Query: 169  ---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG---------M 216
               PG  G PG  G++G +G+ G  G+IG  G  G PGE G  G  G  G         +
Sbjct: 1485 TGQPGLPGEPGQPGEQGVQGEAGPAGQIGPRGERGQPGERGTAGPRGERGTRGEQGPAGL 1544

Query: 217  DGIPGKDGLPGKDGIPGTN------------GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            DG  G+ G PG+ G PG N            G++G KG +GP+G RG+ G  G+ G P 
Sbjct: 1545 DGSKGERGHPGERGTPGPNGKKGDRGFQGAAGSDGAKGSSGPKGVRGEGGPQGLQGLPG 1603



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 90/184 (48%), Gaps = 24/184 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGIPGDEGKRGPKGD 165
            PG+ GP G  G  G  G+ G +G +GE+G  G        GP G +G+PG+ G+ G  G+
Sbjct: 1194 PGMSGPKGHAGWPGKDGKPGEQGRQGERGESGSPGGPGAQGPMGARGLPGERGRPGQSGE 1253

Query: 166  ---------MGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRD---GLPGEPGLDGI 210
                      G+PGP+G PG +G     GPKG  G PG  G+ G     GL G+ G  G+
Sbjct: 1254 AGAAGLPGPQGFPGPRGAPGPQGSNGATGPKGSQGNPGVAGMKGAQGPTGLTGDSGPRGL 1313

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            PG  G DG  G+ G PG  G PG     G  G +G  GP G  G  G +G PG P     
Sbjct: 1314 PGPAGEDGRRGERGEPGSQGTPGPQGEMGAAGVRGFPGPSGPAGAKGESGEPGRPGPIGS 1373

Query: 268  KRES 271
            K  S
Sbjct: 1374 KGSS 1377



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/126 (46%), Positives = 74/126 (58%), Gaps = 3/126 (2%)

Query: 138  EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---G 194
            + G PG VGP GP+G+PG  G  GPKG  G+PG  G PG++G++G +G+ G PG     G
Sbjct: 1175 QPGTPGPVGPSGPRGLPGIPGMSGPKGHAGWPGKDGKPGEQGRQGERGESGSPGGPGAQG 1234

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              G  GLPGE G  G  G  G  G+PG  G PG  G PG  G+NG  G  G +GN G +G
Sbjct: 1235 PMGARGLPGERGRPGQSGEAGAAGLPGPQGFPGPRGAPGPQGSNGATGPKGSQGNPGVAG 1294

Query: 255  INGVPG 260
            + G  G
Sbjct: 1295 MKGAQG 1300



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 73/150 (48%), Gaps = 18/150 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G  G +G  G  G +GE+G+ GAPG +            G+ GP+GD G  GP
Sbjct: 1629 PGKPGDRGSPGPMGISGPQGSQGEKGQTGAPGPL------------GQSGPRGDTGETGP 1676

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PG +G  GP+   G PG  G  GRDG PG  G  G PG  G  G PG     G  GI
Sbjct: 1677 AGRPGPQGLAGPQ---GRPGSTGRAGRDGKPGAKGDSGDPGEQGDRGDPGPL---GPRGI 1730

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG  G  G  G  GP+G  G  G  G  GT
Sbjct: 1731 PGAKGDRGPAGRPGPQGLAGAGGRPGATGT 1760



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/147 (46%), Positives = 79/147 (53%), Gaps = 3/147 (2%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +G  G  G  G  G MG  G  GE G  G  G PGP G  G EG RG +G  G PG  
Sbjct: 1906 GDRGNTGSPGPAGMSGPMGAPGPSGEAGPQGPTGDPGPSGPVGPEGARGSRGPSGEPGIA 1965

Query: 173  GIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G PGD   +G RG KG  G+PG  G+ G  G+PGE G+ G PG NG  G  G  G PG +
Sbjct: 1966 GAPGDAGIQGARGAKGHRGFPGLQGIPGSMGVPGEDGMTGPPGPNGPRGATGPRGSPGLN 2025

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G  G  G +G  G RG+RG SG +
Sbjct: 2026 GKDGPMGQPGPEGPRGSRGDRGDSGTS 2052



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 74/154 (48%), Gaps = 3/154 (1%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QG  G  G  G+ G  GV+GE G +G  G+ GP G  G  G +G RG  G+ G  G  
Sbjct: 1570 GFQGAAGSDGAKGSSGPKGVRGEGGPQGLQGLPGPAGLTGATGAKGDRGETGERGVTGAP 1629

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G PGD G  GP G  G  G  G  G+ G PG   + G  G  G  G  G PG  GL G  
Sbjct: 1630 GKPGDRGSPGPMGISGPQGSQGEKGQTGAPGPLGQSGPRGDTGETGPAGRPGPQGLAGPQ 1689

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G PG+ G  G  G  G +G+ G  G  G  G P 
Sbjct: 1690 GRPGSTGRAGRDGKPGAKGDSGDPGEQGDRGDPG 1723



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 78/150 (52%), Gaps = 18/150 (12%)

Query: 129  EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ---------GIPGDEG 179
            E G  GE+G  G  G+ GP GP G  GD GK G  G+ G PGPQ         G+PG +G
Sbjct: 1781 EPGESGEQGRPGDQGLEGPEGPYGPKGDAGKDGKDGEPGLPGPQGAQGSRGSMGMPGQKG 1840

Query: 180  KRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            + GP+   G PG  G DG+ GLP      G  G  G  G  G  G  G +G+ GKDGIPG
Sbjct: 1841 ESGPR---GAPGPQGEDGKTGLPGISGERGPVGPSGPLGPQGPRGDQGPEGVSGKDGIPG 1897

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G  G KG  G  G+ G +G++G  G P 
Sbjct: 1898 VQGRPGIKGDRGNTGSPGPAGMSGPMGAPG 1927


>gi|403258375|ref|XP_003921748.1| PREDICTED: collagen alpha-1(XXIV) chain [Saimiri boliviensis
            boliviensis]
          Length = 1684

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 92/167 (55%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V + G   +T +  PPG     G +GE G KGE G +G +G+KGAPG  G PG   IPG 
Sbjct: 1230 VGVPGLRGATGQQGPPG---DAGDQGEQGLKGEKGSEGHKGKKGAPGPSGKPG---IPGL 1283

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G  GPKG  GY G  GI G  GK G  G  G PG  G  GR GL G PG  G+ G +G+
Sbjct: 1284 QGPPGPKGIQGYHGADGISGHPGKVGSPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGL 1343

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G PG  G  G+ G+ G  G  G++G  G +G++G  G  G+ G P 
Sbjct: 1344 PGSPGVQGPKGEQGLQGQPGIQGKRGRRGEQGDQGPCGEPGLKGQPG 1390



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 95/192 (49%), Gaps = 36/192 (18%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG QGP GQ+G  G  G +G +G +G KG  GV G  GP G+ G  G  G +G  G PG
Sbjct: 916  PPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGVQGKRGPHGLTGKTGNPGERGVQGKPG 975

Query: 171  PQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDGLPGEPG--------- 206
             QG+PG  G RG               P G+MG  G  G++G  GL GEPG         
Sbjct: 976  LQGLPGSTGDRGLAGEPGLRGLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDIGLGG 1035

Query: 207  ---------LDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                     L G PG  G +G+ GKDGL   PG  GIPG +G  GE G+ G  G  G+SG
Sbjct: 1036 SVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGIPGEDGEKGEMGLPGIIGPLGRSG 1095

Query: 255  INGVPGTPAICA 266
              G+PG   I  
Sbjct: 1096 QMGLPGPEGIVG 1107



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 94/178 (52%), Gaps = 19/178 (10%)

Query: 112  PGLQGPIGQKGEIGAKGE----------------MGVKGERGEKGAPGVVGPPGPQGIPG 155
            PGL G  G KGE G  GE                +G +GERGE GA G  G  G  G+ G
Sbjct: 1178 PGLSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRG 1237

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
              G++GP GD G  G QG+ G++G  G KG  G PG  G  G  GL G PG  GI G +G
Sbjct: 1238 ATGQQGPPGDAGDQGEQGLKGEKGSEGHKGKKGAPGPSGKPGIPGLQGPPGPKGIQGYHG 1297

Query: 216  MDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             DGI   PGK G PGK G+PG  G+ G  G+ G  G  G  G +G+PG+P +   K E
Sbjct: 1298 ADGISGHPGKVGSPGKQGLPGIRGSPGRTGLAGAPGPPGVKGSSGLPGSPGVQGPKGE 1355



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 93/180 (51%), Gaps = 27/180 (15%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +GV G RG   ++G PG  G  G QG+ G++G  G KG  G PGP
Sbjct: 1215 QGERGEPGAEGYKGHVGVPGLRGATGQQGPPGDAGDQGEQGLKGEKGSEGHKGKKGAPGP 1274

Query: 172  Q---GIPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                GIPG +G  GPKG  GY         PG++G  G+ GL   PG+ G PGR G+ G 
Sbjct: 1275 SGKPGIPGLQGPPGPKGIQGYHGADGISGHPGKVGSPGKQGL---PGIRGSPGRTGLAGA 1331

Query: 220  PGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G+ G  G+PG+ G  G K         G+ G RG RG+ G  G  G P +     E
Sbjct: 1332 PGPPGVKGSSGLPGSPGVQGPKGEQGLQGQPGIQGKRGRRGEQGDQGPCGEPGLKGQPGE 1391



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 94/180 (52%), Gaps = 27/180 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------PPGPQG---IPGDE 157
            GLQG +G  GE+G +G  G++GE G +G PG  G             PG +G    PG+E
Sbjct: 996  GLQGDVGPPGEMGIEGPPGIEGESGLQGEPGAKGDIGLGGSVGGTGEPGLRGEPGAPGEE 1055

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G +G  G  G PG +GIPG++G+   KG+MG PG IG  GR G  G PG +GI G  G  
Sbjct: 1056 GLQGKDGLKGVPGGRGIPGEDGE---KGEMGLPGIIGPLGRSGQMGLPGPEGIVGILGQR 1112

Query: 218  GIPGKDGLPGK---------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G PGK G  G+          G PG  G +G KG  G RG  G  G+ G  G P I  Y+
Sbjct: 1113 GRPGKKGDKGQVGPMGEVGSKGFPGKVGKSGPKGARGTRGAVGHLGLMGPEGEPGIPGYR 1172



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/189 (41%), Positives = 92/189 (48%), Gaps = 27/189 (14%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGA------------ 141
            V  QG      E  P GL G +G  G IG KGE G  G    +GEKG             
Sbjct: 842  VGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGP 901

Query: 142  ------PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                  PG VG  GP G  G +G+RGP+G  G  G QGI   +G +G KG  G  G  GL
Sbjct: 902  IGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGI---QGAKGEKGVQGKRGPHGL 958

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G+ G PGE G+ G PG  G+ G  G  GL   PG  G+ G  G  GE G+ GP G  G+
Sbjct: 959  TGKTGNPGERGVQGKPGLQGLPGSTGDRGLAGEPGLRGLQGDVGPPGEMGIEGPPGIEGE 1018

Query: 253  SGINGVPGT 261
            SG+ G PG 
Sbjct: 1019 SGLQGEPGA 1027



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 92/191 (48%), Gaps = 42/191 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +G  G KG  G+ G RGEKG PG+ G  G  G PG +G  GP+G+   PGP+
Sbjct: 558 GLIGPPGMQGAKGLKGHPGLPGLRGEKGIPGLAGNVGSPGYPGRQGLAGPEGN---PGPK 614

Query: 173 GI------PGDEGKRGPKGDMGYP---GRIGLDGRDGLPGE------PGLDGIP---GRN 214
           G+      PG+ G+ GP+G+ G P   G+ G  GR G PG+       GLDG P   G  
Sbjct: 615 GVRGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGT 674

Query: 215 GMDGIPGKDG------------------LPGKDGIPGTNGTNGEKGMTGPRGN---RGKS 253
           G  G PG  G                  L G  G+PG  G  GE+G  G  G     G  
Sbjct: 675 GPLGFPGLRGSVGPVGPIGPPGIPGPVGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDK 734

Query: 254 GINGVPGTPAI 264
           G  G+PG P +
Sbjct: 735 GAIGLPGPPGV 745



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 87/167 (52%), Gaps = 12/167 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+G  G  GE G +G+ G+KG  G +G PG  G  G  G+PG  G  G  G MG PGP
Sbjct: 1043 PGLRGEPGAPGEEGLQGKDGLKGVPGGRGIPGEDGEKGEMGLPGIIGPLGRSGQMGLPGP 1102

Query: 172  QGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            +GI G  G+R   G KGD G  G +G  G  G PG+ G  G  G  G  G  G  GL   
Sbjct: 1103 EGIVGILGQRGRPGKKGDKGQVGPMGEVGSKGFPGKVGKSGPKGARGTRGAVGHLGL--- 1159

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
                   G  GE G+ G RG++G+ G++G+PG      Y  E  ++L
Sbjct: 1160 ------MGPEGEPGIPGYRGHQGQPGLSGLPGPKGEKGYPGEDSTVL 1200



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 74/144 (51%), Gaps = 9/144 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQGP G KG  G  G  G+ G  G+ G+PG  G PG +G PG  G  G  G  G  G 
Sbjct: 1281 PGLQGPPGPKGIQGYHGADGISGHPGKVGSPGKQGLPGIRGSPGRTGLAGAPGPPGVKGS 1340

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------PGLDGIPGRNGMDGIPGK 222
             G+PG  G +GPKG+ G  G+ G+ G+ G  GE         PGL G PG  G+ G+ G 
Sbjct: 1341 SGLPGSPGVQGPKGEQGLQGQPGIQGKRGRRGEQGDQGPCGEPGLKGQPGEYGVQGLTGF 1400

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGP 246
             G PG  G  G  G  G  G  GP
Sbjct: 1401 QGFPGPKGPEGDAGIVGISGPKGP 1424



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD 165
           PGL GP G KG+ G      + GE+G++G  G++GPPG QG       PG  G RG KG 
Sbjct: 527 PGLPGPKGPKGDPGFSPGQAIPGEKGDQGLFGLIGPPGMQGAKGLKGHPGLPGLRGEKGI 586

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G  G PG  G++G  G  G PG  G+ G  G PGE G  G  G  G+ GI GK G 
Sbjct: 587 PGLAGNVGSPGYPGRQGLAGPEGNPGPKGVRGFIGSPGEAGQLGPEGERGIPGIRGKKGF 646

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G PG  G  G  G+ G  G  G +G  G PG
Sbjct: 647 KGRQGFPGDFGDRGPAGLDGSPGLVGGTGPLGFPG 681



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------RGPKG 185
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q IPG++G             +G KG
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAIPGEKGDQGLFGLIGPPGMQGAKG 570

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G+PG  GL G  G+PG  G  G PG  G  G+ G +G PG  G+ G  G+ GE G  G
Sbjct: 571 LKGHPGLPGLRGEKGIPGLAGNVGSPGYPGRQGLAGPEGNPGPKGVRGFIGSPGEAGQLG 630

Query: 246 PRGNRGKSGING 257
           P G RG  GI G
Sbjct: 631 PEGERGIPGIRG 642



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 87/177 (49%), Gaps = 33/177 (18%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IG  GE+G +G+ G+KG     G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 802 LKGTQGEEGPIGPFGELGPRGKPGQKG---YAGEPGPEGLKGEVGDQGNIGKIGETGPVG 858

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
           +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 859 LPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG 918

Query: 213 RN---------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      G DG+ G+ G+ G  G  G  G  G  G+TG  GN G+ G+ G PG
Sbjct: 919 SQGPKGQRGPRGPDGLLGEQGIQGAKGEKGVQGKRGPHGLTGKTGNPGERGVQGKPG 975



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 80/167 (47%), Gaps = 21/167 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
           PGL G +G  G  G +G  G +G  G KG  G +G PG  G  G EG+R   G +G  G+
Sbjct: 587 PGLAGNVGSPGYPGRQGLAGPEGNPGPKGVRGFIGSPGEAGQLGPEGERGIPGIRGKKGF 646

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------LDGI 210
            G QG PGD G RGP G  G PG +G  G  G PG  G                  L G 
Sbjct: 647 KGRQGFPGDFGDRGPAGLDGSPGLVGGTGPLGFPGLRGSVGPVGPIGPPGIPGPVGLSGN 706

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G+ G  G+ G  G+ G PG  G  G  G+ GP G RGK G +G
Sbjct: 707 KGLPGIKGDKGEQGTAGELGEPGYPGDKGAIGLPGPPGVRGKPGPSG 753



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 100/249 (40%), Gaps = 75/249 (30%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           V   G+        P G  GP G +G IG+ GE G  G  GE+G PG+ G  G    QG 
Sbjct: 593 VGSPGYPGRQGLAGPEGNPGPKGVRGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGF 652

Query: 154 PGDEGKRGPKG------------DMGYPGPQG---------------------------I 174
           PGD G RGP G             +G+PG +G                           I
Sbjct: 653 PGDFGDRGPAGLDGSPGLVGGTGPLGFPGLRGSVGPVGPIGPPGIPGPVGLSGNKGLPGI 712

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------------- 217
            GD+G++G  G++G PG  G  G  GLPG PG+ G PG +G                   
Sbjct: 713 KGDKGEQGTAGELGEPGYPGDKGAIGLPGPPGVRGKPGPSGQTGDPGLQGPSGPPGPEGF 772

Query: 218 ----GIPGKDGLPGKDGIPGT---------NGTNGEKGMTGPRGN---RGKSGINGVPGT 261
               GIPG++G  G  G+ G           GT GE+G  GP G    RGK G  G  G 
Sbjct: 773 PGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGE 832

Query: 262 PAICAYKRE 270
           P     K E
Sbjct: 833 PGPEGLKGE 841



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 67/130 (51%), Gaps = 15/130 (11%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPG 212
           KRGP+G  G  G  G+PG  G +GPKGD G+      PG  G  G  GL G PG+ G  G
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAIPGEKGDQGLFGLIGPPGMQGAKG 570

Query: 213 RNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
             G  G+P   G+ G+PG  G  G+ G  G +G+ GP GN G  G+ G  G+P       
Sbjct: 571 LKGHPGLPGLRGEKGIPGLAGNVGSPGYPGRQGLAGPEGNPGPKGVRGFIGSPG------ 624

Query: 270 ESCSLLPNSE 279
           E+  L P  E
Sbjct: 625 EAGQLGPEGE 634



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 88/182 (48%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
           GL G  G KGE G  GE+G  G  G+KGA G+ GPPG +G PG  G+ G           
Sbjct: 708 GLPGIKGDKGEQGTAGELGEPGYPGDKGAIGLPGPPGVRGKPGPSGQTGDPGLQGPSGPP 767

Query: 162 ----PKGDMGYPG---PQG---------------IPGDEGKRGPKGDMGYPGRIGLDGRD 199
                 GD+G PG   P+G               + G +G+ GP G  G  G  G  G+ 
Sbjct: 768 GPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQK 827

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  GEPG +G+ G  G  G  GK G      LPG+ G+ G+ G  GE+G  GP G +G+ 
Sbjct: 828 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEK 887

Query: 254 GI 255
           G+
Sbjct: 888 GV 889



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 84/180 (46%), Gaps = 33/180 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G KG +G +G  G   +KG +GE+G  G  G  GP+G PG       KG  G 
Sbjct: 779 PGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQ------KGYAGE 832

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP+G+      +G  GD G  G+IG  G  GLPGE G+ G  G  G  G PG  G  G+
Sbjct: 833 PGPEGL------KGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGE 886

Query: 229 DGI------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+                  PG  G  G  G  GP+G RG  G +G+ G   I   K E
Sbjct: 887 KGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGE 946



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 15/85 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG------APGVVGPPGPQGIPGDEGKRGPKGD 165
            PG+QGP G++G  G  G  G +G RGE+G       PG+ G PG  G+      +G  G 
Sbjct: 1347 PGVQGPKGEQGLQGQPGIQGKRGRRGEQGDQGPCGEPGLKGQPGEYGV------QGLTGF 1400

Query: 166  MGYPGPQGIPGDE---GKRGPKGDM 187
             G+PGP+G  GD    G  GPKG +
Sbjct: 1401 QGFPGPKGPEGDAGIVGISGPKGPI 1425


>gi|355561827|gb|EHH18459.1| hypothetical protein EGK_15062 [Macaca mulatta]
          Length = 913

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 107/195 (54%), Gaps = 36/195 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 417 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 476

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+RGP G+ G   P+G  G +G RG      PKGD G PG
Sbjct: 477 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAG---PKGERGAQGARGIPGLPGPKGDTGLPG 533

Query: 192 RIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              +DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  G
Sbjct: 534 ---VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 590

Query: 246 PRGNRGKSGINGVPG 260
           P GN GK G  G PG
Sbjct: 591 PMGNSGKPGQQGPPG 605



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 99/174 (56%), Gaps = 21/174 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 418 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 477

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQG+PG   D+G+RGP G+ G  G  G  G  G+PG      +PG  G  G+
Sbjct: 478 RGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPG------LPGPKGDTGL 531

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG DG   +DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  S
Sbjct: 532 PGVDG---RDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGS 582



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 91/205 (44%), Gaps = 60/205 (29%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------ 166
           GL GP G  G +G KG+   KGE G  G+ G  GPPG  G+PG+ G+ GP GD       
Sbjct: 326 GLTGPDGSPGSVGPKGQ---KGEPGVPGSRGFPGPPGTAGLPGELGRVGPVGDPGRRGRP 382

Query: 167 ------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                                         GYPG   +PG  G +G KG++G PGR G  
Sbjct: 383 GPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPG---LPGMRGHKGAKGEIGEPGRQGHK 439

Query: 197 GRDGLPGE---PGLDGIPGRNGMDGIPG------------KDGLPGKDGIPGTNGTNGEK 241
           G +G  GE    G  G PG  G+ GI G             DG PG  G+PG  G  G++
Sbjct: 440 GEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGAPGDQGQR 499

Query: 242 ---GMTGPRGNRGKSGINGVPGTPA 263
              G  GP+G RG  G  G+PG P 
Sbjct: 500 GPPGEAGPKGERGAQGARGIPGLPG 524



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KGERG +GA G+ G P            GPKGD G
Sbjct: 483 EPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLP------------GPKGDTG 530

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 531 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 590

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 591 PMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPG 632



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 73/145 (50%), Gaps = 6/145 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G++G  GA+G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 488 GLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 547

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG  G PG+ G  G  G PG+ G  G  
Sbjct: 548 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEV 607

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G  G+PG  G  G  G PG  G
Sbjct: 608 GPRGPRGLPGSRGELGPVGSPGLPG 632



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 84/160 (52%), Gaps = 27/160 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PGP G  G  G++GP G++G  GP+
Sbjct: 560 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGPMGNSGKPGQQGPPGEVGPRGPR 613

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PG+                   G+ G  G+ GEPG  G  G +
Sbjct: 614 GLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 673

Query: 215 GMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRG 251
           G +G  G+ G  G  G+PG  G+    GE G+ GP G+RG
Sbjct: 674 GEEGETGERGELGDIGLPGPKGSVSNPGEPGLRGPEGSRG 713



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 76/176 (43%), Gaps = 54/176 (30%)

Query: 112 PGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G+   MG  G+ G++G PG VGP GP+G+PG  G+ GP G  G 
Sbjct: 571 PGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGL 630

Query: 169 PGP---------------------QGIPGDEGKRGPKGDMGYPGR------------IGL 195
           PG                      +G  G  G+ GPKG+ G  G             IGL
Sbjct: 631 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGETGERGELGDIGL 690

Query: 196 DGRDGL---PGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
            G  G    PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 691 PGPKGSVSNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 746



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 49/91 (53%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGD+G  G +G PG    RGPKG         
Sbjct: 804 QMGMRGLPGIKGPPGALGL------RGPKGDLGEKGERGPPG----RGPKG--------- 844

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPG+PG     GRNG DG  G  G+
Sbjct: 845 LPGAVGLPGDPGPASY-GRNGRDGERGPPGV 874



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G++G+RGP  +G  G PG  G+PGD G       
Sbjct: 804 QMGMRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAVGLPGDPG------- 856

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 857 ---PASYGRNGRDGERGPPGV 874



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 69/196 (35%), Gaps = 60/196 (30%)

Query: 144 VVGPP---------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
             G P         GP G PG  G +G KG+ G PG +G PG  G  G  G++G  G +G
Sbjct: 315 APGKPGTPGADGLTGPDGSPGSVGPKGQKGEPGVPGSRGFPGPPGTAGLPGELGRVGPVG 374

Query: 195 ---------------------------------LDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                                              GR G PG PG+ G  G  G  G PG
Sbjct: 375 DPGRRGRPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMRGHKGAKGEIGEPG 434

Query: 222 K------------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           +                   G PG  G+ G  G  G+KG  G RG  G+ G  G+PG P 
Sbjct: 435 RQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGAPG 494

Query: 264 ICAYKRESCSLLPNSE 279
               +       P  E
Sbjct: 495 DQGQRGPPGEAGPKGE 510


>gi|345326301|ref|XP_003431029.1| PREDICTED: collagen alpha-1(III) chain [Ornithorhynchus anatinus]
          Length = 1416

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/152 (47%), Positives = 91/152 (59%), Gaps = 15/152 (9%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           +G +GQ G  GA G MG +G  G +GA   +G PG +G+PG+ GK G KG+         
Sbjct: 373 KGEVGQAGIPGAPGLMGARGPPGSQGA---IGAPGQRGVPGEPGKNGAKGE--------- 420

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G+RG  G  G PG  G +G+ G PGEPG++G+PG  G  G PG  GLPG +GIPG 
Sbjct: 421 PGLRGERGEAGTPGAPGSNGEEGKKGAPGEPGVNGVPGTPGDRGAPGFRGLPGSNGIPGE 480

Query: 235 NGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
            G  GE+   G TGPRG  G+ G +G PGTP 
Sbjct: 481 KGPAGERGSPGATGPRGLAGEPGRDGNPGTPG 512



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 88/183 (48%), Gaps = 27/183 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G   S      PG +G  G+ G+ GAKGE G++GERGE G PG          PG
Sbjct: 387 LMGARGPPGSQGAIGAPGQRGVPGEPGKNGAKGEPGLRGERGEAGTPGA---------PG 437

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G+ G KG  G PG  G+PG  G RG  G  G PG  G+ G  G  GE G  G  G  G
Sbjct: 438 SNGEEGKKGAPGEPGVNGVPGTPGDRGAPGFRGLPGSNGIPGEKGPAGERGSPGATGPRG 497

Query: 216 MDGIPGKDGLPG------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           + G PG+DG PG                  K G PG+ G  G  G  G +G RG+ G+ G
Sbjct: 498 LAGEPGRDGNPGTPGQRGMPGSPGGPGSDGKPGPPGSQGELGRPGPPGSQGPRGQPGVMG 557

Query: 258 VPG 260
            PG
Sbjct: 558 FPG 560



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 95/225 (42%), Gaps = 78/225 (34%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGK----------- 159
           ++G  G  G  GAKGE G  G +GE G PG   + GP GP+G PG+ G+           
Sbjct: 240 MKGHRGFDGRDGAKGETGAPGLKGENGLPGDNGIPGPMGPRGTPGERGRPGLPGSAGARG 299

Query: 160 -------------------------RGPKGDMGYP---GPQGIPGDEGKRGPK------- 184
                                     G KG++G P   G  G PG  G+ GP+       
Sbjct: 300 NDGSPGASGQPGPPGPPGTAGFPGSPGAKGEIGPPGTSGSNGSPGQRGEPGPQGHAGAQG 359

Query: 185 -----------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
                            G  G PG  GL G  G PG  G  G PG+ G+ G PGK+G  G
Sbjct: 360 PPGPPGTAGSPGGKGEVGQAGIPGAPGLMGARGPPGSQGAIGAPGQRGVPGEPGKNGAKG 419

Query: 228 KDGI---------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           + G+         PG  G+NGE+G    +G  G+ G+NGVPGTP 
Sbjct: 420 EPGLRGERGEAGTPGAPGSNGEEGK---KGAPGEPGVNGVPGTPG 461



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 90/204 (44%), Gaps = 57/204 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------VGPPGPQ-- 151
           PG +GP G++G  GA G  G+ GE G  G PG                    GPPG Q  
Sbjct: 478 PGEKGPAGERGSPGATGPRGLAGEPGRDGNPGTPGQRGMPGSPGGPGSDGKPGPPGSQGE 537

Query: 152 ----GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP----- 202
               G PG +G RG  G MG+PGP+G  G  GK G +G  G PG  G  G++G P     
Sbjct: 538 LGRPGPPGSQGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGAPGGPGPAGKNGEPGAQGP 597

Query: 203 ----------GEPGLDG---------------IPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
                     GEPG  G                 G+ G  G  G++GLPG  G  G NG 
Sbjct: 598 PGSSGPPGERGEPGAAGPTGFQGLPGPPGPSGENGKPGEAGPRGENGLPGSPGGKGENGL 657

Query: 238 NGEKGMTGPRGNRGKSGINGVPGT 261
            GE+G  GP GN   +G  G PGT
Sbjct: 658 PGERGPAGPPGN---AGPRGSPGT 678



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 72/176 (40%), Gaps = 40/176 (22%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            E G  GE G  G+RGE G+PG      P G+ G  G RG  G  G  G QG PG  G RG
Sbjct: 903  EAGQPGEKGSPGDRGEPGSPG------PSGVVGIPGVRGMVGLPGLQGRQGTPGQPGARG 956

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------------- 229
              G  G  G  G  G  G PG  GL G  G  G DG PG DG PG+D             
Sbjct: 957  EDGKPGVNGSPGERGPVGPPGPVGLSGTAGEPGRDGNPGSDGQPGRDGSPGGKSSPTPPQ 1016

Query: 230  ---------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                                 G PG  G  G+KG TG RG  G  G  G PG P  
Sbjct: 1017 QAFVKAGPAGPSGPPGPAGIRGAPGLQGARGDKGETGERGANGMKGHRGFPGNPGA 1072



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/113 (47%), Positives = 64/113 (56%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G +G  G+ G  G KG  GE+G+PG  GP G  G PG +G  G  G  G PG 
Sbjct: 460 PGDRGAPGFRGLPGSNGIPGEKGPAGERGSPGATGPRGLAGEPGRDGNPGTPGQRGMPGS 519

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            G PG +GK GP G  G  GR G  G  G  G+PG+ G PG  G DG PGK+G
Sbjct: 520 PGGPGSDGKPGPPGSQGELGRPGPPGSQGPRGQPGVMGFPGPKGNDGAPGKNG 572



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 56/100 (56%), Gaps = 6/100 (6%)

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRN 214
           GK G  G  G PG +G+PG  G +GP G+ G+P   G  G DGRDG  GE    G PG  
Sbjct: 206 GKDGESGRPGRPGERGLPGVPGAKGPPGNPGFPGMKGHRGFDGRDGAKGE---TGAPGLK 262

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G +G+PG +G+PG  G  GT G  G  G+ G  G RG  G
Sbjct: 263 GENGLPGDNGIPGPMGPRGTPGERGRPGLPGSAGARGNDG 302



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 65/154 (42%), Gaps = 48/154 (31%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM--------- 166
           GP G +GE+G  G  G +G RG+   PGV+G PGP+G  G  GK G +G           
Sbjct: 530 GPPGSQGELGRPGPPGSQGPRGQ---PGVMGFPGPKGNDGAPGKNGERGGPGAPGGPGPA 586

Query: 167 ---GYPGPQ------------GIPG---------------------DEGKRGPKGDMGYP 190
              G PG Q            G PG                       G+ GP+G+ G P
Sbjct: 587 GKNGEPGAQGPPGSSGPPGERGEPGAAGPTGFQGLPGPPGPSGENGKPGEAGPRGENGLP 646

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G +GLPGE G  G PG  G  G PG  G
Sbjct: 647 GSPGGKGENGLPGERGPAGPPGNAGPRGSPGTAG 680



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 58/128 (45%), Gaps = 30/128 (23%)

Query: 148 PGPQGIPGD---------------------EGKRGPKGDMGYPGPQGIPGDEGKRGP--- 183
           PG QG PG+                      GK G  G  G PG +G+PG  G +GP   
Sbjct: 175 PGYQGSPGEPGQAGPAGPPGPPGALGPSGPAGKDGESGRPGRPGERGLPGVPGAKGPPGN 234

Query: 184 ------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
                 KG  G+ GR G  G  G PG  G +G+PG NG+ G  G  G PG+ G PG  G+
Sbjct: 235 PGFPGMKGHRGFDGRDGAKGETGAPGLKGENGLPGDNGIPGPMGPRGTPGERGRPGLPGS 294

Query: 238 NGEKGMTG 245
            G +G  G
Sbjct: 295 AGARGNDG 302



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 9/60 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQG  G KGE G +G  G+KG RG  G PG          PG  G+ G +G +G PGP
Sbjct: 1040 PGLQGARGDKGETGERGANGMKGHRGFPGNPGA---------PGSPGQAGQQGAVGSPGP 1090


>gi|355748689|gb|EHH53172.1| hypothetical protein EGM_13753 [Macaca fascicularis]
          Length = 913

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/192 (42%), Positives = 104/192 (54%), Gaps = 30/192 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 417 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 476

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIG 194
           A G+ G PGPQG+PG  G +G +G  G  GP+G  G +G RG      PKGD G PG   
Sbjct: 477 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPGPKGDTGLPG--- 533

Query: 195 LDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           +DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  GP G
Sbjct: 534 VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGPMG 593

Query: 249 NRGKSGINGVPG 260
           N GK G  G PG
Sbjct: 594 NSGKPGQQGPPG 605



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 99/174 (56%), Gaps = 21/174 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 418 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 477

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQG+PG   D+G+RGP G+ G  G  G  G  G+PG      +PG  G  G+
Sbjct: 478 RGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPG------LPGPKGDTGL 531

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG DG   +DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  S
Sbjct: 532 PGVDG---RDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGS 582



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 91/205 (44%), Gaps = 60/205 (29%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------ 166
           GL GP G  G +G KG+   KGE G  G+ G  GPPG  G+PG+ G+ GP GD       
Sbjct: 326 GLTGPDGSPGSVGPKGQ---KGEPGVPGSRGFPGPPGTAGLPGELGRVGPVGDPGRRGRP 382

Query: 167 ------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                                         GYPG   +PG  G +G KG++G PGR G  
Sbjct: 383 GPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPG---LPGMRGHKGAKGEIGEPGRQGHK 439

Query: 197 GRDGLPGE---PGLDGIPGRNGMDGIPG------------KDGLPGKDGIPGTNGTNGEK 241
           G +G  GE    G  G PG  G+ GI G             DG PG  G+PG  G  G++
Sbjct: 440 GEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGAPGDQGQR 499

Query: 242 ---GMTGPRGNRGKSGINGVPGTPA 263
              G  GP+G RG  G  G+PG P 
Sbjct: 500 GPPGEAGPKGERGAQGARGIPGLPG 524



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KGERG +GA G+ G P            GPKGD G
Sbjct: 483 EPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLP------------GPKGDTG 530

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 531 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 590

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 591 PMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPG 632



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 73/145 (50%), Gaps = 6/145 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G++G  GA+G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 488 GLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 547

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG  G PG+ G  G  G PG+ G  G  
Sbjct: 548 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEV 607

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G  G+PG  G  G  G PG  G
Sbjct: 608 GPRGPRGLPGSRGELGPVGSPGLPG 632



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 84/160 (52%), Gaps = 27/160 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PGP G  G  G++GP G++G  GP+
Sbjct: 560 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGPMGNSGKPGQQGPPGEVGPRGPR 613

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PG+                   G+ G  G+ GEPG  G  G +
Sbjct: 614 GLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 673

Query: 215 GMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRG 251
           G +G  G+ G  G  G+PG  G+    GE G+ GP G+RG
Sbjct: 674 GEEGETGERGELGDIGLPGPKGSVSNPGEPGLRGPEGSRG 713



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 76/176 (43%), Gaps = 54/176 (30%)

Query: 112 PGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G+   MG  G+ G++G PG VGP GP+G+PG  G+ GP G  G 
Sbjct: 571 PGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGL 630

Query: 169 PGP---------------------QGIPGDEGKRGPKGDMGYPGR------------IGL 195
           PG                      +G  G  G+ GPKG+ G  G             IGL
Sbjct: 631 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGETGERGELGDIGL 690

Query: 196 DGRDGL---PGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
            G  G    PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 691 PGPKGSVSNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 746



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 49/91 (53%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGD+G  G +G PG    RGPKG         
Sbjct: 804 QMGMRGLPGIKGPPGALGL------RGPKGDLGEKGERGPPG----RGPKG--------- 844

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPG+PG     GRNG DG  G  G+
Sbjct: 845 LPGAVGLPGDPGPASY-GRNGRDGERGPPGV 874



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G++G+RGP  +G  G PG  G+PGD G       
Sbjct: 804 QMGMRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAVGLPGDPG------- 856

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 857 ---PASYGRNGRDGERGPPGV 874



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 69/196 (35%), Gaps = 60/196 (30%)

Query: 144 VVGPP---------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
             G P         GP G PG  G +G KG+ G PG +G PG  G  G  G++G  G +G
Sbjct: 315 APGKPGTPGADGLTGPDGSPGSVGPKGQKGEPGVPGSRGFPGPPGTAGLPGELGRVGPVG 374

Query: 195 ---------------------------------LDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                                              GR G PG PG+ G  G  G  G PG
Sbjct: 375 DPGRRGRPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMRGHKGAKGEIGEPG 434

Query: 222 K------------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           +                   G PG  G+ G  G  G+KG  G RG  G+ G  G+PG P 
Sbjct: 435 RQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGAPG 494

Query: 264 ICAYKRESCSLLPNSE 279
               +       P  E
Sbjct: 495 DQGQRGPPGEAGPKGE 510


>gi|410967728|ref|XP_003990368.1| PREDICTED: collagen alpha-1(XXIV) chain [Felis catus]
          Length = 1660

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 96/178 (53%), Gaps = 19/178 (10%)

Query: 112  PGLQGPIGQKGEIGAKGE-------------MGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            PGL G  G KGE G  GE              G  GE+GE+G PG  G  G  GIPG  G
Sbjct: 1124 PGLSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGEQGERGEPGAEGYKGHMGIPGPRG 1183

Query: 159  ---KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
               ++GP G+ G  G QG+ G+ G  GPKG  G PG  G  G  GLPG PG  G+ G +G
Sbjct: 1184 ATGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGTPGPAGKPGIPGLPGLPGPKGMQGYHG 1243

Query: 216  MDGIPG---KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             DGI G   K GLPGK G+PGT G+ G  G  G  G RG  G +G+PG+P +   K E
Sbjct: 1244 ADGISGNSGKVGLPGKQGLPGTRGSPGRAGPAGSPGPRGAKGPSGLPGSPGVPGPKGE 1301



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 88/166 (53%), Gaps = 24/166 (14%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGP---------P 148
            G         PPG QGP GQ+G  G  G   E G++G +GEKG  G  GP         P
Sbjct: 865  GLPGHVGARGPPGSQGPKGQRGPRGPDGLIGEQGIQGSKGEKGDQGKRGPYGLTGKTGNP 924

Query: 149  GPQGIPGDEGKRGPKGDMG------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G +GI G  G +GP G  G       PGP+G+PGD G   P G+ G  G  G++G  GL 
Sbjct: 925  GERGIQGKPGLQGPPGSTGDRGLEGEPGPRGLPGDAG---PPGETGAEGPSGIEGEAGLQ 981

Query: 203  GEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            GEPG  G PG  G +G+ GKDGL   PG  G+PG +G  GE G+ G
Sbjct: 982  GEPGAKGEPGAPGEEGLQGKDGLKGNPGGRGLPGEDGEKGETGLPG 1027



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 84/233 (36%), Positives = 103/233 (44%), Gaps = 33/233 (14%)

Query: 59  EFVPPDLYEEIREREKEQQNSTHNNPW-VWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGP 117
           E  P  L+ E+  R K  Q      P    L        V  QG      E  P GL G 
Sbjct: 767 EEGPVGLFGELGARGKPGQKGYAGEPGPEGLKGE-----VGDQGNVGKIGETGPVGLPGE 821

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVV------------------------GPPGPQGI 153
           +G  G IG KGE G  G +G +G  GV+                        GPPG QG 
Sbjct: 822 VGITGSIGEKGERGSPGPQGPQGEKGVMGYPGPPGDPGPIGALGLPGHVGARGPPGSQGP 881

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G RGP G +G  G QG  G++G +G +G  G  G+ G  G  G+ G+PGL G PG 
Sbjct: 882 KGQRGPRGPDGLIGEQGIQGSKGEKGDQGKRGPYGLTGKTGNPGERGIQGKPGLQGPPGS 941

Query: 214 N---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
               G++G PG  GLPG  G PG  G  G  G+ G  G +G+ G  G PG P 
Sbjct: 942 TGDRGLEGEPGPRGLPGDAGPPGETGAEGPSGIEGEAGLQGEPGAKGEPGAPG 994



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 96/175 (54%), Gaps = 27/175 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +G+ G KG  G+ G RGE G PG  G  G +G PG +G  GP+G+   PGP+
Sbjct: 517 GLMGPPGMQGDKGLKGHPGLPGLRGEPGIPGFTGNIGSRGYPGRQGVAGPEGN---PGPK 573

Query: 173 GI------PGDEGKRGPKGDMGYP---GRIGLDGRDGLPGE------PGLDGIPGRNGMD 217
           GI      PG+ G+ GP+G+ G P   G+ GL GR G PG+       G DG PG  G  
Sbjct: 574 GIRGFIGSPGEVGQLGPEGERGVPGIRGKKGLKGRQGFPGDFGDRGPAGPDGSPGLVGSI 633

Query: 218 GIPGKDGLPGK---------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G PG  GL G           GIPG  G +G KG+ G +G++G+ GI G PG P 
Sbjct: 634 GPPGFPGLRGSIGPIGPFGPSGIPGPVGLSGNKGLPGIKGDKGEQGIAGEPGEPG 688



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/158 (46%), Positives = 86/158 (54%), Gaps = 9/158 (5%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGD 165
            PG +G  GQ+G   E G +GE G+KGERG +G  G  G PGP    GIPG  G  GPKG 
Sbjct: 1179 PGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGTPGPAGKPGIPGLPGLPGPKGM 1238

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GY G  GI G+ GK G  G  G PG  G  GR G  G PG  G  G +G+ G PG  G 
Sbjct: 1239 QGYHGADGISGNSGKVGLPGKQGLPGTRGSPGRAGPAGSPGPRGAKGPSGLPGSPGVPGP 1298

Query: 226  PGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G+   PG  G  G  G  G +G RG+ G+ G PG
Sbjct: 1299 KGEQGLSGQPGIQGKRGHGGAQGDQGPRGEPGLKGQPG 1336



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 114/257 (44%), Gaps = 80/257 (31%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPG 149
            L+  QG   S  E    G +GP G  G+ G  GE G++G+ G +G PG      + G PG
Sbjct: 893  LIGEQGIQGSKGEKGDQGKRGPYGLTGKTGNPGERGIQGKPGLQGPPGSTGDRGLEGEPG 952

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            P+G+PGD G   P G+ G  GP GI G+   +G+ G KG+ G PG  GL G+DGL G PG
Sbjct: 953  PRGLPGDAG---PPGETGAEGPSGIEGEAGLQGEPGAKGEPGAPGEEGLQGKDGLKGNPG 1009

Query: 207  LDGIPGRNG--------------------------------MDGIPGKDGLPGKDG---- 230
              G+PG +G                                + GIPG+ G PGK G    
Sbjct: 1010 GRGLPGEDGEKGETGLPGASGPLGGPGLMGVPGPXXXXXXXIVGIPGQRGRPGKKGEKGQ 1069

Query: 231  ---------------IPGTN-----------------GTNGEKGMTGPRGNRGKSGINGV 258
                           I G+                  G +GE G++G RG++G+ G++G+
Sbjct: 1070 IGPTGEIGSRGAPGQIGGSGPKGARGTRGAVGHLGLMGPDGEPGISGYRGHQGQPGLSGL 1129

Query: 259  PGTPAICAYKRESCSLL 275
            PG      Y  E  ++L
Sbjct: 1130 PGPKGEKGYPGEDSTVL 1146



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 91/191 (47%), Gaps = 27/191 (14%)

Query: 97   VAMQGFCNSTKEYCPPGL------QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
            + + G   +T +  PPG       QG  G++G  G KG+ G  G  G+ G PG+ G PGP
Sbjct: 1176 MGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGTPGPAGKPGIPGLPGLPGP 1235

Query: 151  QG------------------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            +G                  +PG +G  G +G  G  GP G PG  G +GP G  G PG 
Sbjct: 1236 KGMQGYHGADGISGNSGKVGLPGKQGLPGTRGSPGRAGPAGSPGPRGAKGPSGLPGSPGV 1295

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGN 249
             G  G  GL G+PG+ G  G  G  G  G  G PG  G PG +G  G    +G  GPRG 
Sbjct: 1296 PGPKGEQGLSGQPGIQGKRGHGGAQGDQGPRGEPGLKGQPGEHGVQGLTGFQGFPGPRGP 1355

Query: 250  RGKSGINGVPG 260
             G +GI G+ G
Sbjct: 1356 EGDAGIIGISG 1366



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 82/159 (51%), Gaps = 6/159 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGY 168
           PG  G IG +G  G +G  G +G  G KG  G +G PG  G  G EG+RG    +G  G 
Sbjct: 546 PGFTGNIGSRGYPGRQGVAGPEGNPGPKGIRGFIGSPGEVGQLGPEGERGVPGIRGKKGL 605

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G QG PGD G RGP G  G PG +G  G  G PG  G  G  G  G  GIPG  GL G 
Sbjct: 606 KGRQGFPGDFGDRGPAGPDGSPGLVGSIGPPGFPGLRGSIGPIGPFGPSGIPGPVGLSGN 665

Query: 229 DGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPGTPAI 264
            G+PG  G  GE+G+ G  G     G  G  GVPG P +
Sbjct: 666 KGLPGIKGDKGEQGIAGEPGEPGYPGDKGAVGVPGPPGM 704



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 77/152 (50%), Gaps = 9/152 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G KG  G  G  G+ G  G+ G PG  G PG +G PG  G  G  G  G  GP
Sbjct: 1227 PGLPGLPGPKGMQGYHGADGISGNSGKVGLPGKQGLPGTRGSPGRAGPAGSPGPRGAKGP 1286

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGR---------DGLPGEPGLDGIPGRNGMDGIPGK 222
             G+PG  G  GPKG+ G  G+ G+ G+          G  GEPGL G PG +G+ G+ G 
Sbjct: 1287 SGLPGSPGVPGPKGEQGLSGQPGIQGKRGHGGAQGDQGPRGEPGLKGQPGEHGVQGLTGF 1346

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G PG  G  G  G  G  G  GP G RG +G
Sbjct: 1347 QGFPGPRGPEGDAGIIGISGPKGPVGQRGNTG 1378



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 81/165 (49%), Gaps = 15/165 (9%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           +  +G+        P G  GP G +G IG+ GE+G  G  GE+G PG+ G  G    QG 
Sbjct: 552 IGSRGYPGRQGVAGPEGNPGPKGIRGFIGSPGEVGQLGPEGERGVPGIRGKKGLKGRQGF 611

Query: 154 PGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLPGE 204
           PGD G RGP G  G P      GP G PG  G  GP G     G PG +GL G  GL   
Sbjct: 612 PGDFGDRGPAGPDGSPGLVGSIGPPGFPGLRGSIGPIGPFGPSGIPGPVGLSGNKGL--- 668

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG+ G  G  G+ G PG+ G PG  G  G  G  G +G  GP G 
Sbjct: 669 PGIKGDKGEQGIAGEPGEPGYPGDKGAVGVPGPPGMRGKPGPTGQ 713



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 99/237 (41%), Gaps = 54/237 (22%)

Query: 97   VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------- 143
              +QG   +  E   PG   LQG  G KG  G +G  G  GE+GE G PG          
Sbjct: 978  AGLQGEPGAKGEPGAPGEEGLQGKDGLKGNPGGRGLPGEDGEKGETGLPGASGPLGGPGL 1037

Query: 144  -------------VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK---GDM 187
                         +VG PG +G PG +G++G  G  G  G +G PG  G  GPK   G  
Sbjct: 1038 MGVPGPXXXXXXXIVGIPGQRGRPGKKGEKGQIGPTGEIGSRGAPGQIGGSGPKGARGTR 1097

Query: 188  GYPGRIGLDGRDGLP---------GEPGLDGIPGRNGMDGIPGKDGL------------- 225
            G  G +GL G DG P         G+PGL G+PG  G  G PG+D               
Sbjct: 1098 GAVGHLGLMGPDGEPGISGYRGHQGQPGLSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGP 1157

Query: 226  ---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
                G+ G PG  G  G  G+ GPRG  G+ G  G PG       K E  S  P  +
Sbjct: 1158 VGEQGERGEPGAEGYKGHMGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGK 1214



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 77/157 (49%), Gaps = 21/157 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---GY 168
           PG++G  G KG  G  G+ G +G  G  G+PG+VG  GP G PG  G  GP G     G 
Sbjct: 597 PGIRGKKGLKGRQGFPGDFGDRGPAGPDGSPGLVGSIGPPGFPGLRGSIGPIGPFGPSGI 656

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP G+ G++G  G KGD G  G  G  G  G PG+ G  G+PG  GM G PG  G  G 
Sbjct: 657 PGPVGLSGNKGLPGIKGDKGEQGIAGEPGEPGYPGDKGAVGVPGPPGMRGKPGPTGQMGD 716

Query: 229 D------------------GIPGTNGTNGEKGMTGPR 247
                              GIPG NG  G KG+ G R
Sbjct: 717 PGPQGPCGPPGPEGFPGDIGIPGQNGPEGSKGLLGNR 753



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 70/131 (53%), Gaps = 12/131 (9%)

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG---L 195
           +G  G+ GP G  G+PG  G +GPKGD G    Q +PG +G +G  G MG PG  G   L
Sbjct: 471 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAVPGKKGSQGLSGLMGPPGMQGDKGL 530

Query: 196 DGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN------GTNGEKGMTGP 246
            G  GLPG   EPG+ G  G  G  G PG+ G+ G +G PG        G+ GE G  GP
Sbjct: 531 KGHPGLPGLRGEPGIPGFTGNIGSRGYPGRQGVAGPEGNPGPKGIRGFIGSPGEVGQLGP 590

Query: 247 RGNRGKSGING 257
            G RG  GI G
Sbjct: 591 EGERGVPGIRG 601



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 82/166 (49%), Gaps = 15/166 (9%)

Query: 98   AMQGF-------CNSTKEYCP-----PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV 145
             MQG+        NS K   P     PG +G  G+ G  G+ G  G KG  G  G+PGV 
Sbjct: 1237 GMQGYHGADGISGNSGKVGLPGKQGLPGTRGSPGRAGPAGSPGPRGAKGPSGLPGSPGVP 1296

Query: 146  GPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            GP G QG+   PG +GKRG  G  G  GP+G PG +G+ G  G  G  G  G  G  G  
Sbjct: 1297 GPKGEQGLSGQPGIQGKRGHGGAQGDQGPRGEPGLKGQPGEHGVQGLTGFQGFPGPRGPE 1356

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            G+ G+ GI G  G  G  G  G  GK+GI G  G  G +G  G RG
Sbjct: 1357 GDAGIIGISGPKGPVGQRGNTGPFGKEGIIGPTGRTGPRGEKGFRG 1402



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 62/114 (54%), Gaps = 9/114 (7%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPG 212
           +RGP+G  G  G  G+PG  G +GPKGD G       PG+ G  G  GL G PG+ G  G
Sbjct: 470 RRGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAVPGKKGSQGLSGLMGPPGMQGDKG 529

Query: 213 RNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G+P   G+ G+PG  G  G+ G  G +G+ GP GN G  GI G  G+P 
Sbjct: 530 LKGHPGLPGLRGEPGIPGFTGNIGSRGYPGRQGVAGPEGNPGPKGIRGFIGSPG 583



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 97/266 (36%), Gaps = 93/266 (34%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGA------KGEMGVKGERGE------KGAPGVV 145
            ++G       + P G+ GP+G  G  G       KGE G+ GE GE      KGA GV 
Sbjct: 640 GLRGSIGPIGPFGPSGIPGPVGLSGNKGLPGIKGDKGEQGIAGEPGEPGYPGDKGAVGVP 699

Query: 146 GPPGPQG------------------------------IPGDEGKRGPKGDMG-------- 167
           GPPG +G                              IPG  G  G KG +G        
Sbjct: 700 GPPGMRGKPGPTGQMGDPGPQGPCGPPGPEGFPGDIGIPGQNGPEGSKGLLGNRGPPGPP 759

Query: 168 -------YPGPQGI------------------PGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                    GP G+                  PG EG +G  GD G  G+IG  G  GLP
Sbjct: 760 GLKGPQGEEGPVGLFGELGARGKPGQKGYAGEPGPEGLKGEVGDQGNVGKIGETGPVGLP 819

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGI------------------PGTNGTNGEKGMT 244
           GE G+ G  G  G  G PG  G  G+ G+                  PG  G  G  G  
Sbjct: 820 GEVGITGSIGEKGERGSPGPQGPQGEKGVMGYPGPPGDPGPIGALGLPGHVGARGPPGSQ 879

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRE 270
           GP+G RG  G +G+ G   I   K E
Sbjct: 880 GPKGQRGPRGPDGLIGEQGIQGSKGE 905



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 35/68 (51%)

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G+PG  G  G+PG  G  G  G  GL     +PG  G+ G  G+ GP G +G  G+ 
Sbjct: 472 GPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAVPGKKGSQGLSGLMGPPGMQGDKGLK 531

Query: 257 GVPGTPAI 264
           G PG P +
Sbjct: 532 GHPGLPGL 539


>gi|30084|emb|CAA38276.1| unnamed protein product [Homo sapiens]
          Length = 931

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 106/189 (56%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGLVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+RGP      KGD G  G +GIPG  G   PKGD G PG
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG---PKGDTGLPG 541

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              +DGRDG+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G
Sbjct: 542 ---VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 599 QMGNSGKPG 607



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA G+ G P            GPKGD G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GP+   G+RG+ G  G PG P 
Sbjct: 599 QMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 640



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 73/140 (52%), Gaps = 6/140 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGLV 477

Query: 185 GDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GD G  G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDT 537

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G+    G  G+ GI G+PGT
Sbjct: 538 GLP---GVDGRDGIPGMPGT 554



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ G+ 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGLV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 532



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G +G  GA+G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 496 GLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 555

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG  G PG+ G  G  G PG+ G  G  
Sbjct: 556 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEV 615

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G  G+PG  G  G  G PG  G
Sbjct: 616 GPRGPQGLPGSRGELGPVGSPGLPG 640



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 88/193 (45%), Gaps = 48/193 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GPQ
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 621

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PG+                   G+ G  G+ GEPG  G  G +
Sbjct: 622 GLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 681

Query: 215 GMD------------GIPGKDGLPGKDGIPGTNGTNGEKGM------------TGPRGNR 250
           G +            G+PG  G  G  G PG  G  G +G+             G +G +
Sbjct: 682 GEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQ 741

Query: 251 GKSGINGVPGTPA 263
           G +G+ GV G P 
Sbjct: 742 GATGLPGVQGPPG 754



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 76/179 (42%), Gaps = 60/179 (33%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   +MG  G+ G++G PG VGP GPQG+PG  G+ GP G  G 
Sbjct: 579 PGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGL 638

Query: 169 PGP------------------------QGIPGDEGKRGPKG---------------DMGY 189
           PG                         +G+ G+ G +G +G               D+G 
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGL 698

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
           PG     G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 PGP---KGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 84/197 (42%), Gaps = 60/197 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGPQGIPGD 156
           PGL GP G  G  G  G  G+ G               + G +G PGV G PG +G+ G+
Sbjct: 528 PGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGE 587

Query: 157 EG------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP----- 205
           +G      K G  G+ G PG QG PG+ G RGP+G  G  G +G  G  GLPG+      
Sbjct: 588 KGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGS 647

Query: 206 -------------------GLDGIPGRNGMDGIPGKD------------GLPGKDGIPGT 234
                              G+ G PG  G  G  G++            GLPG     G+
Sbjct: 648 PGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPK---GS 704

Query: 235 NGTNGEKGMTGPRGNRG 251
            G  GE G+ GP G+RG
Sbjct: 705 AGNPGEPGLRGPEGSRG 721



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 43/85 (50%), Gaps = 17/85 (20%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG +G PG  G RGPKGD+G               E G  G PGR G +G+PG  
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDLG---------------EKGERGPPGR-GPNGLPGAI 857

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRG 248
           GLPG  G P + G NG  G  GP G
Sbjct: 858 GLPGDPG-PASYGKNGRDGERGPPG 881



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 47/93 (50%), Gaps = 24/93 (25%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI- 193
           + G +G PG+ GPPG  G+      RGPKGD+G                KG+ G PGR  
Sbjct: 812 QMGIRGLPGIKGPPGALGL------RGPKGDLGE---------------KGERGPPGRGP 850

Query: 194 -GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            GL G  GLPG+PG     G+NG DG  G  GL
Sbjct: 851 NGLPGAIGLPGDPGPASY-GKNGRDGERGPPGL 882


>gi|130765193|gb|ABO32362.1| collagen alpha-1(X) chain precursor [Cervus nippon]
          Length = 674

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/156 (45%), Positives = 86/156 (55%), Gaps = 12/156 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ+G +G  G  G KGE+G  G PG  G      +PG  G  GP+G  G PG 
Sbjct: 301 PGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPGEAG------LPGPSGNMGPQGPKGIPGN 354

Query: 172 QGIPGDEGKRGPKGDMGYP------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G+PG +G+ GP G  G P      G  GLDG+ G PGEPGL+G  G  G+ G  G  G+
Sbjct: 355 PGLPGPKGEMGPVGPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGI 414

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G+PG  G  G KGM G  G  G  G+ G+PGT
Sbjct: 415 AGSPGLPGPVGPAGAKGMPGHNGEAGPRGVPGIPGT 450



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/144 (50%), Positives = 85/144 (59%), Gaps = 6/144 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GP+G  G  GAKGE G  G  GE G PG    +GP GP+GIPG+ G  GPKG+MG  
Sbjct: 308 GQRGPVGLPGSPGAKGEQGPAGHPGEAGLPGPSGNMGPQGPKGIPGNPGLPGPKGEMGPV 367

Query: 170 GPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GP G PG +G+RG  G     GYPG  GL+G  G PG PG  G PG  G  G+PG  G  
Sbjct: 368 GPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGIAGSPGLPGPVGPA 427

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G+PG NG  G +G+ G  G R
Sbjct: 428 GAKGMPGHNGEAGPRGVPGIPGTR 451



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 77/152 (50%), Gaps = 28/152 (18%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           IG+ G  G  G+ G+ G +G  GAPG      P G+PG  G        G PG   +PG 
Sbjct: 263 IGKPGAPGTPGQPGIPGMKGHSGAPG------PAGLPGAPG-------FGKPG---LPGL 306

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
           +G+RGP   +G PG  G  G  G  G PG  G+PG +G  G  G  G+PG  G+PG  G 
Sbjct: 307 KGQRGP---VGLPGSPGAKGEQGPAGHPGEAGLPGPSGNMGPQGPKGIPGNPGLPGPKG- 362

Query: 238 NGEKGMTGPRGN------RGKSGINGVPGTPA 263
             E G  GP GN      RG SG++G PG P 
Sbjct: 363 --EMGPVGPAGNPGAKGERGSSGLDGKPGYPG 392



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G PG  G PG  G  G KG  G PG  GL G  G  G+PGL G+ G+ G  G+PG    
Sbjct: 263 IGKPGAPGTPGQPGIPGMKGHSGAPGPAGLPGAPGF-GKPGLPGLKGQRGPVGLPGS--- 318

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           PG  G  G  G  GE G+ GP GN G  G  G+PG P +   K E   + P
Sbjct: 319 PGAKGEQGPAGHPGEAGLPGPSGNMGPQGPKGIPGNPGLPGPKGEMGPVGP 369


>gi|296484185|tpg|DAA26300.1| TPA: collagen alpha-1(X) chain precursor [Bos taurus]
          Length = 674

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/144 (50%), Positives = 85/144 (59%), Gaps = 6/144 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GP+G  G  GAKGE G  G  GE G PG    +GP GP+GIPG+ G  GPKG+MG  
Sbjct: 308 GQRGPVGLPGSPGAKGEQGPAGHPGEAGLPGPSGNMGPQGPKGIPGNPGLPGPKGEMGPV 367

Query: 170 GPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GP G PG +G+RG  G     GYPG  GL+G  G PG PG  G PG  G  G+PG  G  
Sbjct: 368 GPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGIAGSPGLPGPVGPA 427

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G+PG NG  G +G+ G  G R
Sbjct: 428 GAKGVPGHNGEAGPRGVPGIPGTR 451



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 86/156 (55%), Gaps = 12/156 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ+G +G  G  G KGE+G  G PG  G      +PG  G  GP+G  G PG 
Sbjct: 301 PGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPGEAG------LPGPSGNMGPQGPKGIPGN 354

Query: 172 QGIPGDEGKRGPKGDMGYP------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G+PG +G+ GP G  G P      G  GLDG+ G PGEPGL+G  G  G+ G  G  G+
Sbjct: 355 PGLPGPKGEMGPVGPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGI 414

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G+PG  G  G KG+ G  G  G  G+ G+PGT
Sbjct: 415 AGSPGLPGPVGPAGAKGVPGHNGEAGPRGVPGIPGT 450



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 85/165 (51%), Gaps = 19/165 (11%)

Query: 115 QGP--IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-----------------PQGIPG 155
           QGP  IG+ G  G  G+ G+ G +G+ GAPG  G PG                 P G+PG
Sbjct: 258 QGPEGIGKPGAPGIPGQPGIPGMKGQPGAPGTAGLPGAPGFGKPGLPGLKGQRGPVGLPG 317

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G +G +G  G+PG  G+PG  G  GP+G  G PG  GL G  G  G  G  G PG  G
Sbjct: 318 SPGAKGEQGPAGHPGEAGLPGPSGNMGPQGPKGIPGNPGLPGPKGEMGPVGPAGNPGAKG 377

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G DG PG  G PG NG  G  G+ GP+G+ G +G  G+PG
Sbjct: 378 ERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGIAGSPGLPG 422



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 80/154 (51%), Gaps = 17/154 (11%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEG------------KRGPKGDMGYPGPQGIPGDEGKRG 182
           +RGE G PG  G  G QG+PG+ G            ++GP+G +G PG  GIPG  G  G
Sbjct: 221 KRGENGLPGQPGLKGDQGVPGERGAAGPSGPQGPPGEQGPEG-IGKPGAPGIPGQPGIPG 279

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            KG  G PG  GL G  G  G+PGL G+ G+ G  G+PG    PG  G  G  G  GE G
Sbjct: 280 MKGQPGAPGTAGLPGAPGF-GKPGLPGLKGQRGPVGLPGS---PGAKGEQGPAGHPGEAG 335

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           + GP GN G  G  G+PG P +   K E   + P
Sbjct: 336 LPGPSGNMGPQGPKGIPGNPGLPGPKGEMGPVGP 369



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 81/175 (46%), Gaps = 25/175 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEK-----------------GAPGVVGPPGPQGIPGDEGKRG 161
           G  G+ G KG+ GV GERG                   G PG  G PG  GIPG +G+ G
Sbjct: 226 GLPGQPGLKGDQGVPGERGAAGPSGPQGPPGEQGPEGIGKPGAPGIPGQPGIPGMKGQPG 285

Query: 162 PKGDMGYPGPQG-----IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR--- 213
             G  G PG  G     +PG +G+RGP G  G PG  G  G  G PGE GL G  G    
Sbjct: 286 APGTAGLPGAPGFGKPGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPGEAGLPGPSGNMGP 345

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  GIPG  GLPG  G  G  G  G  G  G RG+ G  G  G PG P +   K
Sbjct: 346 QGPKGIPGNPGLPGPKGEMGPVGPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPK 400


>gi|27807139|ref|NP_777059.1| collagen alpha-1(X) chain precursor [Bos taurus]
 gi|115325|sp|P23206.1|COAA1_BOVIN RecName: Full=Collagen alpha-1(X) chain; Flags: Precursor
 gi|264|emb|CAA37624.1| type X collagen [Bos taurus]
 gi|227501|prf||1705182A collagen alpha1(X)
          Length = 674

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/144 (50%), Positives = 85/144 (59%), Gaps = 6/144 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GP+G  G  GAKGE G  G  GE G PG    +GP GP+GIPG+ G  GPKG+MG  
Sbjct: 308 GQRGPVGLPGSPGAKGEQGPAGHPGEAGLPGPSGNMGPQGPKGIPGNPGLPGPKGEMGPV 367

Query: 170 GPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GP G PG +G+RG  G     GYPG  GL+G  G PG PG  G PG  G  G+PG  G  
Sbjct: 368 GPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGIAGSPGLPGPVGPA 427

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G+PG NG  G +G+ G  G R
Sbjct: 428 GAKGVPGHNGEAGPRGVPGIPGTR 451



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 86/156 (55%), Gaps = 12/156 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ+G +G  G  G KGE+G  G PG  G      +PG  G  GP+G  G PG 
Sbjct: 301 PGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPGEAG------LPGPSGNMGPQGPKGIPGN 354

Query: 172 QGIPGDEGKRGPKGDMGYP------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G+PG +G+ GP G  G P      G  GLDG+ G PGEPGL+G  G  G+ G  G  G+
Sbjct: 355 PGLPGPKGEMGPVGPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGI 414

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G+PG  G  G KG+ G  G  G  G+ G+PGT
Sbjct: 415 AGSPGLPGPVGPAGAKGVPGHNGEAGPRGVPGIPGT 450



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 85/165 (51%), Gaps = 19/165 (11%)

Query: 115 QGP--IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-----------------PQGIPG 155
           QGP  IG+ G  G  G+ G+ G +G+ GAPG  G PG                 P G+PG
Sbjct: 258 QGPEGIGKPGAPGIPGQPGIPGMKGQPGAPGTAGLPGAPGFGKPGLPGLKGQRGPVGLPG 317

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G +G +G  G+PG  G+PG  G  GP+G  G PG  GL G  G  G  G  G PG  G
Sbjct: 318 SPGAKGEQGPAGHPGEAGLPGPSGNMGPQGPKGIPGNPGLPGPKGEMGPVGPAGNPGAKG 377

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G DG PG  G PG NG  G  G+ GP+G+ G +G  G+PG
Sbjct: 378 ERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGIAGSPGLPG 422



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 80/154 (51%), Gaps = 17/154 (11%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEG------------KRGPKGDMGYPGPQGIPGDEGKRG 182
           +RGE G PG  G  G QG+PG+ G            ++GP+G +G PG  GIPG  G  G
Sbjct: 221 KRGENGLPGQPGLKGDQGVPGERGAAGPSGPQGPPGEQGPEG-IGKPGAPGIPGQPGIPG 279

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            KG  G PG  GL G  G  G+PGL G+ G+ G  G+PG    PG  G  G  G  GE G
Sbjct: 280 MKGQPGAPGTAGLPGAPGF-GKPGLPGLKGQRGPVGLPGS---PGAKGEQGPAGHPGEAG 335

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           + GP GN G  G  G+PG P +   K E   + P
Sbjct: 336 LPGPSGNMGPQGPKGIPGNPGLPGPKGEMGPVGP 369



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 81/175 (46%), Gaps = 25/175 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEK-----------------GAPGVVGPPGPQGIPGDEGKRG 161
           G  G+ G KG+ GV GERG                   G PG  G PG  GIPG +G+ G
Sbjct: 226 GLPGQPGLKGDQGVPGERGAAGPSGPQGPPGEQGPEGIGKPGAPGIPGQPGIPGMKGQPG 285

Query: 162 PKGDMGYPGPQG-----IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR--- 213
             G  G PG  G     +PG +G+RGP G  G PG  G  G  G PGE GL G  G    
Sbjct: 286 APGTAGLPGAPGFGKPGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPGEAGLPGPSGNMGP 345

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  GIPG  GLPG  G  G  G  G  G  G RG+ G  G  G PG P +   K
Sbjct: 346 QGPKGIPGNPGLPGPKGEMGPVGPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPK 400


>gi|58891004|gb|AAW83043.1| collagen type X alpha 1, partial [Canis lupus familiaris]
          Length = 623

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/152 (48%), Positives = 87/152 (57%), Gaps = 12/152 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GPIG  G  GAKGE G  G  GE G    PG +GP GP+GIPG++G  GPKG+MG  
Sbjct: 257 GQRGPIGLPGSPGAKGEQGPAGHPGEPGLTGPPGNMGPQGPKGIPGNQGIPGPKGEMGPV 316

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G PG +G+R         G  GLDG+ G PGEPG  G  G +G+ G  G  GL G  
Sbjct: 317 GPAGHPGAKGER---------GSSGLDGKPGYPGEPGSSGPKGNSGLPGPKGDAGLRGSP 367

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G+PG  G  G KG  G  G  G  G  G+PGT
Sbjct: 368 GLPGPVGPAGAKGTPGHNGETGPRGAPGIPGT 399



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 81/159 (50%), Gaps = 17/159 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-----------------PQGIPGDEGKRG 161
           G+ G  GA G+ G+ G +G  GAPG+ G PG                 P G+PG  G +G
Sbjct: 213 GKPGAPGAPGQPGIPGTKGHPGAPGIAGSPGAPGFGKPGLPGLKGQRGPIGLPGSPGAKG 272

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            +G  G+PG  G+ G  G  GP+G  G PG  G+ G  G  G  G  G PG  G  G  G
Sbjct: 273 EQGPAGHPGEPGLTGPPGNMGPQGPKGIPGNQGIPGPKGEMGPVGPAGHPGAKGERGSSG 332

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            DG PG  G PG++G  G  G+ GP+G+ G  G  G+PG
Sbjct: 333 LDGKPGYPGEPGSSGPKGNSGLPGPKGDAGLRGSPGLPG 371



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 87/216 (40%), Gaps = 55/216 (25%)

Query: 112 PGLQGPIGQKG------EIGAKGEMGVKGERGEKG------------------------- 140
           PG QGP+G  G      E GA G  GV G++GE G                         
Sbjct: 107 PGQQGPMGAPGPRGFPGEKGAPGVPGVHGQKGETGYGAPGRPGERGPPGPQGPLGPPGPP 166

Query: 141 ---APGVVGPPGPQGIPGDEGKRGPKG-----------------DMGYPGPQGIPGDEGK 180
                G  G PG  GI GD G  G +G                   G PG  G PG  G 
Sbjct: 167 GVGKRGETGFPGQPGIKGDRGFPGERGAAGPPGPQGPPGERGPEGTGKPGAPGAPGQPGI 226

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            G KG  G PG  G  G  G  G+PGL G+ G+ G  G+PG    PG  G  G  G  GE
Sbjct: 227 PGTKGHPGAPGIAGSPGAPGF-GKPGLPGLKGQRGPIGLPGS---PGAKGEQGPAGHPGE 282

Query: 241 KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G+TGP GN G  G  G+PG   I   K E   + P
Sbjct: 283 PGLTGPPGNMGPQGPKGIPGNQGIPGPKGEMGPVGP 318



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PG  GP G  G  G KG+ G+   RG  G PG VGP G +G PG  G+ GP+G  G PG
Sbjct: 343 PGSSGPKGNSGLPGPKGDAGL---RGSPGLPGPVGPAGAKGTPGHNGETGPRGAPGIPG 398


>gi|291396813|ref|XP_002714770.1| PREDICTED: type X collagen alpha 1 [Oryctolagus cuniculus]
          Length = 680

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/152 (48%), Positives = 85/152 (55%), Gaps = 12/152 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G  GP G  G  GAKGE G  G  GE G    PG +GP GP+GIPG+ G  GPKG++G  
Sbjct: 308 GQMGPTGLPGAPGAKGEQGPAGHPGEPGLTGPPGNMGPQGPKGIPGNHGLPGPKGEIGPV 367

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G PG  G RGP          GLDG+ G PGEPGL+G  G  G+ G  G  G+ G  
Sbjct: 368 GPAGNPGARGARGPP---------GLDGKPGYPGEPGLNGPKGNPGLPGPKGDAGVRGSP 418

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G+PG  G  G KG+ G  G  G  G  G+PGT
Sbjct: 419 GLPGPVGPVGAKGVPGHDGEAGPRGAPGIPGT 450



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/160 (44%), Positives = 86/160 (53%), Gaps = 17/160 (10%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-----IPGDEGKRGPKGDMGYP--- 169
           IG+ G +GA GE G+ G +G  GAPG+ G PG  G     +PG +G+ GP G  G P   
Sbjct: 263 IGKPGAVGAPGEPGIPGTKGHPGAPGIAGAPGAPGFGKPGLPGLKGQMGPTGLPGAPGAK 322

Query: 170 ---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------GLDGIPGRNGMDGIP 220
              GP G PG+ G  GP G+MG  G  G+ G  GLPG        G  G PG  G  G P
Sbjct: 323 GEQGPAGHPGEPGLTGPPGNMGPQGPKGIPGNHGLPGPKGEIGPVGPAGNPGARGARGPP 382

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G DG PG  G PG NG  G  G+ GP+G+ G  G  G+PG
Sbjct: 383 GLDGKPGYPGEPGLNGPKGNPGLPGPKGDAGVRGSPGLPG 422



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/127 (46%), Positives = 64/127 (50%), Gaps = 15/127 (11%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  GP G KG  G  G  G KGE         +GP GP G PG  G RGP G  G P 
Sbjct: 339 PPGNMGPQGPKGIPGNHGLPGPKGE---------IGPVGPAGNPGARGARGPPGLDGKP- 388

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
             G PG+ G  GPKG+ G PG     G  G+ G PGL G  G  G  G+PG DG  G  G
Sbjct: 389 --GYPGEPGLNGPKGNPGLPGP---KGDAGVRGSPGLPGPVGPVGAKGVPGHDGEAGPRG 443

Query: 231 IPGTNGT 237
            PG  GT
Sbjct: 444 APGIPGT 450


>gi|426336956|ref|XP_004031717.1| PREDICTED: macrophage receptor MARCO isoform 2 [Gorilla gorilla
           gorilla]
          Length = 442

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/170 (45%), Positives = 93/170 (54%), Gaps = 18/170 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GLQGP G  G+ GA G  G +GE+G KG  G++GP G  G         +PG +G RG K
Sbjct: 127 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMK 186

Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRN--- 214
           GD   MG PG QG  GD G+ G  G  G+PG  G  G+ GL   PG PG  G PG     
Sbjct: 187 GDAGVMGPPGAQGSKGDSGRPGAPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 246

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G PG+ GLPG  G PG  G  G KG TG +G +G+ G  GVPG   +
Sbjct: 247 GSAGSPGRAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGELGVPGPAGV 296



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 101/193 (52%), Gaps = 21/193 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGK---------R 160
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD G+          
Sbjct: 157 GLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQGSKGDSGRPGAPGLAGFP 216

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD 217
           G KGD G PG QG+PG  G  G  G  G PG  G  GR GL   PG PG  G+ G  G  
Sbjct: 217 GAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGSKGDT 276

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPR---GNRGKSGINGVPGTPAICAYKRES 271
           G+ G+ G  G+ G+PG  G  GE+   G+ GP+   G  G+ G  GV G+      K E 
Sbjct: 277 GLQGQQGRKGELGVPGPAGVKGEQGSPGLAGPKGAPGQAGQKGDQGVKGSSGEQGVKGEK 336

Query: 272 CSLLPNSETSQLL 284
                NS + +++
Sbjct: 337 GERGENSVSVRIV 349



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 82/152 (53%), Gaps = 6/152 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  GA G  G  G +G++G PG+ G PGP G  G  G +G  G  G PG
Sbjct: 194 PPGAQGSKGDSGRPGAPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPG 253

Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G+PG  G       +G KGD G  G+ G  G  G+PG  G+ G  G  G+ G  G  G
Sbjct: 254 RAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGELGVPGPAGVKGEQGSPGLAGPKGAPG 313

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G+ G  G  G++GE+G+ G +G RG++ ++
Sbjct: 314 QAGQKGDQGVKGSSGEQGVKGEKGERGENSVS 345



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 85/210 (40%), Gaps = 75/210 (35%)

Query: 131 GVKGERGEKGAPGV---------------------------------------------- 144
           G+ G +GE+GAPG+                                              
Sbjct: 64  GMFGIKGEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAAGRDGATGPPGPQGPPGVK 123

Query: 145 --VGPPGPQGIPGD---------EGKRGPKGDMGYPGPQ------------GIPGDEGKR 181
              G  GPQG PG          +G++G KGD G  GP+            G+PG +G R
Sbjct: 124 GEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDR 183

Query: 182 GPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G KGD   MG PG  G  G  G PG PGL G PG  G  G PG  G+PG    PG  G  
Sbjct: 184 GMKGDAGVMGPPGAQGSKGDSGRPGAPGLAGFPGAKGDQGQPGLQGVPGP---PGAVGHP 240

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G KG  G  G+ G++G+ G PG+P     K
Sbjct: 241 GAKGEPGSAGSPGRAGLPGSPGSPGATGLK 270



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 55/141 (39%), Gaps = 33/141 (23%)

Query: 164 GDMGYPGPQGIPGDEG------------------KRGPKGDMG---------------YP 190
           G  G  G QG PG +G                  ++G KG  G                 
Sbjct: 64  GMFGIKGEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAAGRDGATGPPGPQGPPGVK 123

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  GL G  G PG+ G  G PG  G  G  G  GL G  G  GT G  G+ G+ G +G+R
Sbjct: 124 GEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDR 183

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  G  GV G P     K +S
Sbjct: 184 GMKGDAGVMGPPGAQGSKGDS 204


>gi|119569212|gb|EAW48827.1| collagen, type IX, alpha 1, isoform CRA_f [Homo sapiens]
          Length = 921

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 106/189 (56%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+RGP      KGD G  G +GIPG  G   PKGD G PG
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG---PKGDTGLPG 541

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              +DGRDG+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G
Sbjct: 542 ---VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 599 QMGNSGKPG 607



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA G+ G P            GPKGD G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GP+   G+RG+ G  G PG P 
Sbjct: 599 QMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 640



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 73/140 (52%), Gaps = 6/140 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 185 GDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GD G  G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDT 537

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G+    G  G+ GI G+PGT
Sbjct: 538 GLP---GVDGRDGIPGMPGT 554



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 532



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G +G  GA+G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 496 GLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 555

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG  G PG+ G  G  G PG+ G  G  
Sbjct: 556 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEV 615

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G  G+PG  G  G  G PG  G
Sbjct: 616 GPRGPQGLPGSRGELGPVGSPGLPG 640



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 83/160 (51%), Gaps = 27/160 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GPQ
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 621

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PG+                   G+ G  G+ GEPG  G  G +
Sbjct: 622 GLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 681

Query: 215 GMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRG 251
           G +G  G+ G  G  G+PG  G+    GE G+ GP G+RG
Sbjct: 682 GEEGEAGERGELGDIGLPGPKGSVSNPGEPGLRGPEGSRG 721



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 76/176 (43%), Gaps = 54/176 (30%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   +MG  G+ G++G PG VGP GPQG+PG  G+ GP G  G 
Sbjct: 579 PGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGL 638

Query: 169 PGP---------------------QGIPGDEGKRGPKGDMGYPGR------------IGL 195
           PG                      +G  G  G+ GPKG+ G  G             IGL
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGL 698

Query: 196 DGRDGL---PGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
            G  G    PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 PGPKGSVSNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 57/114 (50%), Gaps = 21/114 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGPQGIPGD 156
           PGL GP G  G  G  G  G+ G               + G +G PGV G PG +G+ G+
Sbjct: 528 PGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGE 587

Query: 157 EG------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           +G      K G  G+ G PG QG PG+ G RGP+G  G  G +G  G  GLPG+
Sbjct: 588 KGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGK 641



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G++G+RGP  +G  G PG  G+PGD G       
Sbjct: 812 QMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPNGLPGAIGLPGDPG------- 864

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 865 ---PASYGRNGRDGERGPPGV 882



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 48/91 (52%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGD+G  G +G PG    RGP G         
Sbjct: 812 QMGIRGLPGIKGPPGALGL------RGPKGDLGEKGERGPPG----RGPNG--------- 852

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPG+PG     GRNG DG  G  G+
Sbjct: 853 LPGAIGLPGDPGPASY-GRNGRDGERGPPGV 882



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 43/84 (51%), Gaps = 18/84 (21%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG +G PG  G RGPKGD+G               E G  G PGR G +G+PG  
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDLG---------------EKGERGPPGR-GPNGLPGAI 857

Query: 224 GLPGKDGIP--GTNGTNGEKGMTG 245
           GLPG  G    G NG +GE+G  G
Sbjct: 858 GLPGDPGPASYGRNGRDGERGPPG 881


>gi|110629866|gb|ABG80449.1| fibrillar collagen [Hydra vulgaris]
          Length = 1476

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 103/199 (51%), Gaps = 24/199 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP+G  G  GAKGE+G +GE+GE G  G  G  G  G  G EG RG KGD G PGP
Sbjct: 818  PGEPGPVGHPGSDGAKGELGARGEKGETGPAGGNGEAGQIGALGAEGGRGEKGDRGQPGP 877

Query: 172  ---QGIPGDE---GKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGK 222
               QG PG++   G+RGP G+ G  GR G  G+D   G PGE G  G PG NG  G PGK
Sbjct: 878  RGNQGSPGNDGPRGRRGPNGNPGPSGRPGPQGKDGPKGSPGETGHPGKPGENGAPGFPGK 937

Query: 223  DGL---PGKDGI------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            DG    PG+DGI            PG  G  G  G +G  G +G  G  G PG P    +
Sbjct: 938  DGRNGEPGEDGISGLPGDIGPVGLPGQPGPQGRIGASGFPGTQGTVGTKGEPGVPGKPGF 997

Query: 268  KRESCSLLPNSETSQLLIP 286
            K +  S+  N     + +P
Sbjct: 998  KGQKGSIGANGSPGPVGLP 1016



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 101/211 (47%), Gaps = 63/211 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G  GE G  G +G +G RGEKG  G  GP G QG PG++G RG +G  G PGP 
Sbjct: 843  GETGPAGGNGEAGQIGALGAEGGRGEKGDRGQPGPRGNQGSPGNDGPRGRRGPNGNPGPS 902

Query: 173  GIPGDEGKRGPKG---DMGYPGRIG---------LDGRDGLPGEPGLDGIPG-------- 212
            G PG +GK GPKG   + G+PG+ G          DGR+G PGE G+ G+PG        
Sbjct: 903  GRPGPQGKDGPKGSPGETGHPGKPGENGAPGFPGKDGRNGEPGEDGISGLPGDIGPVGLP 962

Query: 213  ----------------------RNGMDGIPGKDG------------------LP---GKD 229
                                    G  G+PGK G                  LP   GKD
Sbjct: 963  GQPGPQGRIGASGFPGTQGTVGTKGEPGVPGKPGFKGQKGSIGANGSPGPVGLPGKSGKD 1022

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PGT+G NGE G  GP+GN G+ G  G+PG
Sbjct: 1023 GAPGTDGKNGEPGDIGPKGNSGEKGFLGLPG 1053



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 94/185 (50%), Gaps = 24/185 (12%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------PGVVGP 147
           +  QG   ST     PG  G +G  G+ G+ G  G  G  G++GA         PG +GP
Sbjct: 521 IGQQGIKGSTGA---PGASGEMGASGDRGSPGPAGKPGTSGKQGARGIPGNDGRPGAMGP 577

Query: 148 ---------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                    PG QG+ G  G  G  G+ G PG +G  GD+G +G +G +G  G IGL G 
Sbjct: 578 MGERGLPGIPGLQGMKGSPGLSGATGENGRPGDKGTQGDKGLKGNQGQIGESGPIGLKGE 637

Query: 199 DGLPG---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            GL G   +PG  G PG  G  G PGKDG PG+ G  G +G  GE+G+ GP G +G  G 
Sbjct: 638 RGLAGPTGQPGHQGPPGALGESGAPGKDGDPGQPGDQGNDGRQGEQGLRGPPGVKGAPGP 697

Query: 256 NGVPG 260
            G PG
Sbjct: 698 RGAPG 702



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 82/148 (55%), Gaps = 6/148 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  GE GA GE G +G+RG+ G  G+ G     G PG  G+ G  GD G PGP G PG  
Sbjct: 501 GNPGEPGAPGEKGQRGDRGQIGQQGIKGS---TGAPGASGEMGASGDRGSPGPAGKPGTS 557

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           GK+G +   G PG  G  G  G  GE GL GIPG  GM G PG  G  G++G PG  GT 
Sbjct: 558 GKQGAR---GIPGNDGRPGAMGPMGERGLPGIPGLQGMKGSPGLSGATGENGRPGDKGTQ 614

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G+KG+ G +G  G+SG  G+ G   +  
Sbjct: 615 GDKGLKGNQGQIGESGPIGLKGERGLAG 642



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 86/161 (53%), Gaps = 12/161 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGY 168
           PG +GP G+KG+ GA+G  G  G+ G+ GA G  GP G QG PG+ G +G     G  G 
Sbjct: 740 PGSKGPEGEKGQHGARGAKGQTGDEGKDGAKGPDGPAGLQGPPGESGIKGEPGRSGSNGL 799

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG +G PG +G +GP G  G PG +G  G DG  GE G  G  G  G  G  G+ G  G 
Sbjct: 800 PGRRGNPGPQGNKGPAGQPGEPGPVGHPGSDGAKGELGARGEKGETGPAGGNGEAGQIGA 859

Query: 229 DGIPGTNGTNGEKGMTGPRGN---------RGKSGINGVPG 260
            G  G  G  G++G  GPRGN         RG+ G NG PG
Sbjct: 860 LGAEGGRGEKGDRGQPGPRGNQGSPGNDGPRGRRGPNGNPG 900



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 91/185 (49%), Gaps = 42/185 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPG------------D 156
           PG QG  G++GE G +G  GVKG  G +GAPG+VG PG Q   GIPG            D
Sbjct: 671 PGDQGNDGRQGEQGLRGPPGVKGAPGPRGAPGLVGEPGEQGSDGIPGYKGPSGPPGLPGD 730

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGI 210
            G+ G  G  G  GP+G  G  G RG KG  G  G+ G  G D      G PGE G+ G 
Sbjct: 731 NGQPGSSGLPGSKGPEGEKGQHGARGAKGQTGDEGKDGAKGPDGPAGLQGPPGESGIKGE 790

Query: 211 PGRNGMDGIPGKD---------------------GLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PGR+G +G+PG+                      G PG DG  G  G  GEKG TGP G 
Sbjct: 791 PGRSGSNGLPGRRGNPGPQGNKGPAGQPGEPGPVGHPGSDGAKGELGARGEKGETGPAGG 850

Query: 250 RGKSG 254
            G++G
Sbjct: 851 NGEAG 855



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 92/162 (56%), Gaps = 6/162 (3%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G +G  G++GE G +GE G+KG+ G  G  G+ GPPGPQG  G  G  GP G +G
Sbjct: 277 EQGPSGEKGSSGKEGEKGQEGENGLKGDTGPAGPRGLQGPPGPQGQMGPTGLMGPIGSIG 336

Query: 168 YPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            PGPQ      G PGD+G+RGPKG+ G  G  G  G  G  G+ G  G  G  G  G  G
Sbjct: 337 LPGPQGSAGLPGTPGDQGERGPKGETGATGSRGERGEQGERGKAGEPGQKGSKGPLGSRG 396

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           +DG  G  G  G+ G+ G +G+ GPRG++G  G +G  G P 
Sbjct: 397 RDGFRGDKGSSGSPGSQGPRGLVGPRGHQGLQGSDGSIGEPG 438



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 90/180 (50%), Gaps = 24/180 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKGERGEKGAPGVVGPPG 149
           +    G   +T E   PG +G  G KG      +IG  G +G+KGERG  G     G PG
Sbjct: 592 MKGSPGLSGATGENGRPGDKGTQGDKGLKGNQGQIGESGPIGLKGERGLAGP---TGQPG 648

Query: 150 PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            QG PG  G+ G  G  G PG    PGD+G  G +G+ G  G  G+ G  G  G PGL G
Sbjct: 649 HQGPPGALGESGAPGKDGDPG---QPGDQGNDGRQGEQGLRGPPGVKGAPGPRGAPGLVG 705

Query: 210 IPGRNGMDGIPG------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  G DGIPG             +G PG  G+PG+ G  GEKG  G RG +G++G  G
Sbjct: 706 EPGEQGSDGIPGYKGPSGPPGLPGDNGQPGSSGLPGSKGPEGEKGQHGARGAKGQTGDEG 765



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/147 (45%), Positives = 76/147 (51%), Gaps = 3/147 (2%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P GL GP G KG  G +GE G  GE+G  G  G  G  G  G+ GD G  GP+G  G PG
Sbjct: 259 PSGLDGPQGYKGNKGEQGEQGPSGEKGSSGKEGEKGQEGENGLKGDTGPAGPRGLQGPPG 318

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           PQG  G  G  GP G +G P   G  G  GLPG PG  G  G  G  G  G  G  G+ G
Sbjct: 319 PQGQMGPTGLMGPIGSIGLP---GPQGSAGLPGTPGDQGERGPKGETGATGSRGERGEQG 375

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G+KG  GP G+RG+ G  G
Sbjct: 376 ERGKAGEPGQKGSKGPLGSRGRDGFRG 402



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 93/214 (43%), Gaps = 30/214 (14%)

Query: 83  NPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP 142
            P   +     I L   QG           G +GP G+ G  G++GE G +GERG+ G P
Sbjct: 324 GPTGLMGPIGSIGLPGPQGSAGLPGTPGDQGERGPKGETGATGSRGERGEQGERGKAGEP 383

Query: 143 GVVGPPGPQGIPGDEGKRGPK---------------GDMGYPGPQGIPGDEGKRGPKGDM 187
           G  G  GP G  G +G RG K               G  G+ G QG  G  G+ GP+G +
Sbjct: 384 GQKGSKGPLGSRGRDGFRGDKGSSGSPGSQGPRGLVGPRGHQGLQGSDGSIGEPGPRGAL 443

Query: 188 GYPGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDG------------LPGKDGIP 232
           G  G  GL G  G+   PG PG  G PG  G  G PG+DG            + G  G P
Sbjct: 444 GEQGPQGLQGPKGMTGDPGSPGSSGAPGPTGSVGKPGRDGNIGPAGPDGPPGISGIPGNP 503

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G  G  GEKG  G RG  G+ GI G  G P    
Sbjct: 504 GEPGAPGEKGQRGDRGQIGQQGIKGSTGAPGASG 537



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 79/146 (54%), Gaps = 9/146 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG +G KGE G  G+ G KG++G  GA G    PGP G+PG  GK       G PG 
Sbjct: 977  PGTQGTVGTKGEPGVPGKPGFKGQKGSIGANGS---PGPVGLPGKSGKD------GAPGT 1027

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G  G+ G  GPKG+ G  G +GL G  G PG  G  G  GR G  G  G DGL G DG 
Sbjct: 1028 DGKNGEPGDIGPKGNSGEKGFLGLPGVVGAPGLAGPTGAKGRAGGPGTRGIDGLKGADGP 1087

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G +G  G +GN+G++G  G
Sbjct: 1088 KGPKGNIGSRGAKGSKGNKGQNGEKG 1113



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 80/150 (53%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP+G  G+ G +G +G  G  G +G  G  G PG  G PG +G++G  G  G PGP
Sbjct: 953  PGDIGPVGLPGQPGPQGRIGASGFPGTQGTVGTKGEPGVPGKPGFKGQKGSIGANGSPGP 1012

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+PG  GK G  G  G  G  G  G  G  GE G  G+PG  G  G+ G  G  G+ G 
Sbjct: 1013 VGLPGKSGKDGAPGTDGKNGEPGDIGPKGNSGEKGFLGLPGVVGAPGLAGPTGAKGRAGG 1072

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PGT G +G KG  GP+G +G  G  G  G+
Sbjct: 1073 PGTRGIDGLKGADGPKGPKGNIGSRGAKGS 1102



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 86/187 (45%), Gaps = 27/187 (14%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G      E  P GL+G  G  G  G  G  G  G  GE GAPG  G PG  G  G++
Sbjct: 618 GLKGNQGQIGESGPIGLKGERGLAGPTGQPGHQGPPGALGESGAPGKDGDPGQPGDQGND 677

Query: 158 GK------RGPKGDMGYPGPQGIPGDEGKRGPKG------------------DMGYPGRI 193
           G+      RGP G  G PGP+G PG  G+ G +G                  D G PG  
Sbjct: 678 GRQGEQGLRGPPGVKGAPGPRGAPGLVGEPGEQGSDGIPGYKGPSGPPGLPGDNGQPGSS 737

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           GL G  G  GE G  G  G  G  G  GKDG  G DG  G  G  GE G+   +G  G+S
Sbjct: 738 GLPGSKGPEGEKGQHGARGAKGQTGDEGKDGAKGPDGPAGLQGPPGESGI---KGEPGRS 794

Query: 254 GINGVPG 260
           G NG+PG
Sbjct: 795 GSNGLPG 801



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 86/161 (53%), Gaps = 18/161 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQG------------IPGD 156
            PG  G  G+ G+IG KG  G KG  G  G   APG+ GP G +G            + G 
Sbjct: 1025 PGTDGKNGEPGDIGPKGNSGEKGFLGLPGVVGAPGLAGPTGAKGRAGGPGTRGIDGLKGA 1084

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGR 213
            +G +GPKG++G  G +G  G++G+ G KGD G+ G  G DG  GL    GE GLDG  G 
Sbjct: 1085 DGPKGPKGNIGSRGAKGSKGNKGQNGEKGDKGFRGLTGPDGIQGLMGKQGEMGLDGNKGS 1144

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G  G PG+DGIPG  G  G  G+ G  G RG+ G
Sbjct: 1145 IGHPGNQGPRGRPGQDGIPGEMGDTGVDGVKGAPGLRGQPG 1185



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 94/194 (48%), Gaps = 30/194 (15%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG------EMGVKGERGEKGAPGVVGP 147
           I L   +G    T +   PG QGP G  GE GA G      + G +G  G +G  G+ GP
Sbjct: 632 IGLKGERGLAGPTGQ---PGHQGPPGALGESGAPGKDGDPGQPGDQGNDGRQGEQGLRGP 688

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG------------DEGK---------RGPKGD 186
           PG +G PG  G  G  G+ G  G  GIPG            D G+         +GP+G+
Sbjct: 689 PGVKGAPGPRGAPGLVGEPGEQGSDGIPGYKGPSGPPGLPGDNGQPGSSGLPGSKGPEGE 748

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G  G  G  G+ G  G+ G  G  G  G+ G PG+ G+ G+ G  G+NG  G +G  GP
Sbjct: 749 KGQHGARGAKGQTGDEGKDGAKGPDGPAGLQGPPGESGIKGEPGRSGSNGLPGRRGNPGP 808

Query: 247 RGNRGKSGINGVPG 260
           +GN+G +G  G PG
Sbjct: 809 QGNKGPAGQPGEPG 822



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 85/175 (48%), Gaps = 18/175 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---------------KGAPGVVGPPGPQGIPGD 156
           PG +G  G  G  G  G  G+ GERG+               +G  G+ GP G +G  G+
Sbjct: 215 PGEKGAQGPAGSPGTNGRDGLNGERGDPGTIGPPGEPGPEGLQGPSGLDGPQGYKGNKGE 274

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G++GP G+ G  G +G  G EG+ G KGD G  G  GL G  G  G+ G  G+ G  G 
Sbjct: 275 QGEQGPSGEKGSSGKEGEKGQEGENGLKGDTGPAGPRGLQGPPGPQGQMGPTGLMGPIGS 334

Query: 217 DGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G+PG     GLPG  G  G  G  GE G TG RG RG+ G  G  G P     K
Sbjct: 335 IGLPGPQGSAGLPGTPGDQGERGPKGETGATGSRGERGEQGERGKAGEPGQKGSK 389



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 84/182 (46%), Gaps = 27/182 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GLQG  G  GE G +G +G +G +G +G  G+ G PG    PG  G  GP G +G PG  
Sbjct: 426 GLQGSDGSIGEPGPRGALGEQGPQGLQGPKGMTGDPG---SPGSSGAPGPTGSVGKPGRD 482

Query: 172 --------------QGIPGD------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                          GIPG+       G++G +GD G  G+ G+ G  G PG  G  G  
Sbjct: 483 GNIGPAGPDGPPGISGIPGNPGEPGAPGEKGQRGDRGQIGQQGIKGSTGAPGASGEMGAS 542

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI---NGVPGTPAICAYK 268
           G  G  G  GK G  GK G  G  G +G  G  GP G RG  GI    G+ G+P +    
Sbjct: 543 GDRGSPGPAGKPGTSGKQGARGIPGNDGRPGAMGPMGERGLPGIPGLQGMKGSPGLSGAT 602

Query: 269 RE 270
            E
Sbjct: 603 GE 604



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/139 (42%), Positives = 67/139 (48%), Gaps = 27/139 (19%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----- 200
           GP GP G  G +G RG  GD G PGPQG PGD G++G +G  G PG  G DG +G     
Sbjct: 183 GPKGPMGPDGKQGPRGQYGDRGEPGPQGEPGDPGEKGAQGPAGSPGTNGRDGLNGERGDP 242

Query: 201 -------------LPGEPGLDGI------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                        L G  GLDG        G  G  G  G+ G  GK+G  G  G NG K
Sbjct: 243 GTIGPPGEPGPEGLQGPSGLDGPQGYKGNKGEQGEQGPSGEKGSSGKEGEKGQEGENGLK 302

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G TGP G R   G+ G PG
Sbjct: 303 GDTGPAGPR---GLQGPPG 318



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 90/190 (47%), Gaps = 30/190 (15%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGV---------V 145
              QG   +  E   PG  G  GQKG IGA G    +G+ G+ G+ GAPG          +
Sbjct: 978  GTQGTVGTKGEPGVPGKPGFKGQKGSIGANGSPGPVGLPGKSGKDGAPGTDGKNGEPGDI 1037

Query: 146  GP------------PGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYP 190
            GP            PG  G PG  G  G KG  G PG +GI    G +G +GPKG++G  
Sbjct: 1038 GPKGNSGEKGFLGLPGVVGAPGLAGPTGAKGRAGGPGTRGIDGLKGADGPKGPKGNIGSR 1097

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G  G  G  GE G  G  G  G DGI    GL GK G  G +G  G  G  G +G R
Sbjct: 1098 GAKGSKGNKGQNGEKGDKGFRGLTGPDGI---QGLMGKQGEMGLDGNKGSIGHPGNQGPR 1154

Query: 251  GKSGINGVPG 260
            G+ G +G+PG
Sbjct: 1155 GRPGQDGIPG 1164



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 9/105 (8%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMG 167
            P G +G IG +G  G+KG  G  GE+G+KG  G+ GP G QG+ G +G+ G    KG +G
Sbjct: 1087 PKGPKGNIGSRGAKGSKGNKGQNGEKGDKGFRGLTGPDGIQGLMGKQGEMGLDGNKGSIG 1146

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            +      PG++G RG  G  G PG +G  G DG+ G PGL G PG
Sbjct: 1147 H------PGNQGPRGRPGQDGIPGEMGDTGVDGVKGAPGLRGQPG 1185



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
            GL GP G +G +G +GEMG+ G +G  G PG  GP   PG  GIPG+ G  G  G  G P
Sbjct: 1119 GLTGPDGIQGLMGKQGEMGLDGNKGSIGHPGNQGPRGRPGQDGIPGEMGDTGVDGVKGAP 1178

Query: 170  GPQGIPGDE 178
            G +G PGD+
Sbjct: 1179 GLRGQPGDD 1187


>gi|83776774|gb|ABC46703.1| collagen-like protein [Streptococcus pyogenes]
          Length = 433

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/143 (48%), Positives = 85/143 (59%), Gaps = 3/143 (2%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGD 156
           +G    T E  P G QGP G +G +G  GE G KGE G +GA G     GP GP G  GD
Sbjct: 171 RGDKGETGEQGPRGAQGPAGPQGPMGPAGERGEKGEPGTQGAKGDRGETGPAGPVGPRGD 230

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G+ G KG+ G  G  G  G+ G  GP G  G  G+ GL G+DG  G+ G DG+PG++G 
Sbjct: 231 KGETGAKGEQGPAGKDGKAGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGK 290

Query: 217 DGIPGKDGLPGKDGIPGTNGTNG 239
           DG  GKDGLPGKDG  G NG +G
Sbjct: 291 DGQNGKDGLPGKDGKDGQNGKDG 313



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 95/220 (43%), Gaps = 60/220 (27%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA------------KGEMGVKGERGEKGAPG 143
           L   +G    T E  P G QGP G +G +G             KGE G +G RG +G  G
Sbjct: 95  LQGPRGDKGETGEQGPRGAQGPAGPQGPVGPAGKDGTQGPRGDKGETGEQGPRGAQGPAG 154

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGP---------------------------QGIPG 176
             GP GP G  G +G RG KG+ G  GP                           QG  G
Sbjct: 155 PQGPVGPAGKDGTQGPRGDKGETGEQGPRGAQGPAGPQGPMGPAGERGEKGEPGTQGAKG 214

Query: 177 DEGKRGP---------KGDMGYPGRIGLDGRDGLPGEP------------GLDGIPGRNG 215
           D G+ GP         KG+ G  G  G  G+DG  GE             G DG+PG++G
Sbjct: 215 DRGETGPAGPVGPRGDKGETGAKGEQGPAGKDGKAGERGPVGPAGKDGQNGKDGLPGKDG 274

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            DG  GKDGLPGKDG  G NG +G  G  G  G  GK G+
Sbjct: 275 KDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGL 314



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 77/139 (55%), Gaps = 9/139 (6%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              QG   +     P G  GP G++GE G  G  G KG+RGE G  G VGP G +G  G 
Sbjct: 177 TGEQGPRGAQGPAGPQGPMGPAGERGEKGEPGTQGAKGDRGETGPAGPVGPRGDKGETGA 236

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG---RDGLPG------EPGL 207
           +G++GP G  G  G +G  G  GK G  G  G PG+ G DG   +DGLPG      + G 
Sbjct: 237 KGEQGPAGKDGKAGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQNGK 296

Query: 208 DGIPGRNGMDGIPGKDGLP 226
           DG+PG++G DG  GKDGLP
Sbjct: 297 DGLPGKDGKDGQNGKDGLP 315


>gi|281343115|gb|EFB18699.1| hypothetical protein PANDA_015680 [Ailuropoda melanoleuca]
          Length = 2904

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 91/153 (59%), Gaps = 6/153 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
            PG +GP G+ G+ G+ G +G +G  G KG PG  G PG  G PG +G    RG KGD+G+
Sbjct: 2524 PGEKGPKGEPGDKGSAGLLGARGLTGPKGEPGAAGIPGDPGFPGKDGAPGVRGDKGDVGF 2583

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             GP+G+   +G+RG KG  G  G  G  G  G PG PGL G  G  G  G+PG+ G PGK
Sbjct: 2584 MGPRGL---KGERGVKGACGLDGEKGDKGEAGPPGRPGLAGRKGEMGEPGVPGQSGAPGK 2640

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            +G+ G  G  G  G  G +G++G+ G  G+PGT
Sbjct: 2641 EGLIGPKGDRGFDGQPGSKGDQGEKGERGLPGT 2673



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/195 (40%), Positives = 95/195 (48%), Gaps = 34/195 (17%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-VGPPGPQGIPGD 156
             ++G      +  P GL GP G +GE G KG+ G  G +G+KG   + VGPPGP      
Sbjct: 2443 GVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDTGASGLKGDKGDAAIAVGPPGP------ 2496

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR------DGLPGEPGLDGI 210
               RG KGDMG  GP GI GD   +GP+G+ G PG  G  G        GL G  GL G 
Sbjct: 2497 ---RGAKGDMGERGPPGIDGD---KGPRGESGNPGEKGPKGEPGDKGSAGLLGARGLTGP 2550

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV------------ 258
             G  G  GIPG  G PGKDG PG  G  G+ G  GPRG +G+ G+ G             
Sbjct: 2551 KGEPGAAGIPGDPGFPGKDGAPGVRGDKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGE 2610

Query: 259  ---PGTPAICAYKRE 270
               PG P +   K E
Sbjct: 2611 AGPPGRPGLAGRKGE 2625



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 82/171 (47%), Gaps = 35/171 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG  G      P G PG  G++G  G+ G PG  
Sbjct: 2582 GFMGPRGLKGERGVKGACGLDGEKGDKGEAG------PPGRPGLAGRKGEMGEPGVPGQS 2635

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMD------------ 217
            G PG EG  GPKGD G+ G+ G  G  G  GE   PG  G PG  G D            
Sbjct: 2636 GAPGKEGLIGPKGDRGFDGQPGSKGDQGEKGERGLPGTGGFPGPRGSDGATGPPGPPGSV 2695

Query: 218  ---------GIPGKDGLPGKD-----GIPGTNGTNGEKGMTGPRGNRGKSG 254
                     G  G+ G PG+      G PGT G  GE+G  GP G RG+ G
Sbjct: 2696 GPKGPEGLQGQKGERGPPGERVVGAPGAPGTPGERGEQGRPGPAGPRGEKG 2746



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 90/196 (45%), Gaps = 52/196 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---------------------KGAPGVVGPPGPQ 151
            GLQGP G +G+ G +G  G KG+RG                       GA G  G PG  
Sbjct: 1717 GLQGPAGPQGDPGVRGPAGEKGDRGPPGLDGRGGLDGKPGATGPPGLHGATGKAGDPGRD 1776

Query: 152  GIPG---------------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G+PG                     ++GK G  G  G P   G PG++G++G KGD G P
Sbjct: 1777 GLPGLRGEHGPPGPPGPPGAQGKPGEDGKPGLNGKNGEP---GDPGEDGRKGEKGDSGAP 1833

Query: 191  GRIGLD---GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            GR G D   G  G PG PGL G PG  G  G P   G P   G+PG  G  G++G TGP+
Sbjct: 1834 GREGHDGPKGERGAPGSPGLQGPPGLPGQVG-PSGQGFP---GVPGNMGPKGDRGETGPK 1889

Query: 248  GNRGKSGINGVPGTPA 263
            G +G  G  G+ G P 
Sbjct: 1890 GEQGLPGERGLRGDPG 1905



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 79/166 (47%), Gaps = 20/166 (12%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P GL+G  G KG  G  GE G KGE G  G PG+ G  G  G PG  G+ G  G  G  G
Sbjct: 2586 PRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGRKGEMGEPGVPGQSGAPGKEGLIG 2645

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------------------GIPG 212
            P+G  G +G+ G KGD G  G  GL G  G PG  G D                  G+ G
Sbjct: 2646 PKGDRGFDGQPGSKGDQGEKGERGLPGTGGFPGPRGSDGATGPPGPPGSVGPKGPEGLQG 2705

Query: 213  RNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            + G  G PG+   G PG  G PG  G  G  G  GPRG +G++ + 
Sbjct: 2706 QKGERGPPGERVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALT 2751



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/156 (43%), Positives = 82/156 (52%), Gaps = 10/156 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QGP+G  G+ G KG+     E G  G PG  G PG +G+ G  G  GPKGD G  G 
Sbjct: 1401 PGPQGPVGPSGQKGEKGDC----EDGAPGLPGQPGSPGERGLRGPPGDIGPKGDRGLKGA 1456

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP--GKD 229
             G  G++G+RG  G +G  G  G+ GR G  G  G  G  GR G  G PG+ G P  G D
Sbjct: 1457 VGETGEKGERGSAGPVGPQGLPGVAGRPGAEGPEGPPGPAGRRGEKGEPGRPGDPAVGPD 1516

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G     G  GEKG  GP G RG +G+ G  G P + 
Sbjct: 1517 GA----GAKGEKGDVGPAGPRGAAGVKGERGPPGLV 1548



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 85/193 (44%), Gaps = 52/193 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++GAP         G VGP   PGP G PG    
Sbjct: 2209 PGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGVPGSPGLPGPVGPKGEPGPMGAPGQAVV 2268

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG  G+ GD  G+ G KGD G PG  G  G  G  GEP   G PG +G 
Sbjct: 2269 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP---GDPGEDGH 2323

Query: 217  DGIPGKDGLPGKDGI--------------------------------PGTNGTNGEKGMT 244
             G PG  G  G  G+                                PG  G  GE G  
Sbjct: 2324 KGTPGLKGSKGDAGVGVQGPPGPAGPLGLKGDVGPPGPPGAPGVVGFPGQTGPRGEMGQP 2383

Query: 245  GPRGNRGKSGING 257
            GP G RG +G+ G
Sbjct: 2384 GPSGERGLAGLPG 2396



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 84/195 (43%), Gaps = 60/195 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI--------------PGDE- 157
            GL GP G+KGE G  GE G  GE G KG PG+ G  G  G+               GD  
Sbjct: 2298 GLPGPRGEKGEAGRAGEPGDPGEDGHKGTPGLKGSKGDAGVGVQGPPGPAGPLGLKGDVG 2357

Query: 158  --------------GKRGPKGDMGYPGPQ------GIPGDE------------------G 179
                          G+ GP+G+MG PGP       G+PG E                  G
Sbjct: 2358 PPGPPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGLPGREGAPGPSGPPGPPGSTGVPG 2417

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
              G KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG+ G  G
Sbjct: 2418 ASGLKGDKGDPG-------AGLPGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERG 2470

Query: 240  EKGMTGPRGNRGKSG 254
            EKG TG  G +G  G
Sbjct: 2471 EKGDTGASGLKGDKG 2485



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 93/232 (40%), Gaps = 75/232 (32%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPG-------- 149
            G      E   PG  G  G+KG+ GA   +G  G KGERG  G+PG+ GPPG        
Sbjct: 1807 GLNGKNGEPGDPGEDGRKGEKGDSGAPGREGHDGPKGERGAPGSPGLQGPPGLPGQVGPS 1866

Query: 150  PQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGR----IGL------- 195
             QG PG  G  GPKGD G  GP   QG+PG+ G RG  G +G   R    IG+       
Sbjct: 1867 GQGFPGVPGNMGPKGDRGETGPKGEQGLPGERGLRGDPGSVGNVERLLETIGIKTSALRE 1926

Query: 196  ----------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL-------------- 225
                            + R G  GEPG  G PG+ G  G  G+ GL              
Sbjct: 1927 IVETWDESSGSFLPMPERRRGPKGEPGERGPPGKEGRIGFSGERGLKGDRGDPGPQGPPG 1986

Query: 226  --------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                                PG  G+PG  G  GE G  G RG RG+ G  G
Sbjct: 1987 LALGERGPPGPPGLAGEPGKPGIPGLPGPAGGTGEAGRPGERGERGEKGERG 2038



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 99/228 (43%), Gaps = 70/228 (30%)

Query: 112  PGLQGPIGQKGE---IGAKGE--MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PGL GP+G KGE   +GA G+  +G+ G +GEKGAPG     +VG PG +G  G  G RG
Sbjct: 2245 PGLPGPVGPKGEPGPMGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRG 2304

Query: 162  PKGDMGYPGPQGIPGDEGK------RGPKGDMG--------------------------- 188
             KG+ G  G  G PG++G       +G KGD G                           
Sbjct: 2305 EKGEAGRAGEPGDPGEDGHKGTPGLKGSKGDAGVGVQGPPGPAGPLGLKGDVGPPGPPGA 2364

Query: 189  -----YPGRIGLDGRDGLP---GEPGLDGIPGRN------------------GMDGIPGK 222
                 +PG+ G  G  G P   GE GL G+PGR                   G  G+ G 
Sbjct: 2365 PGVVGFPGQTGPRGEMGQPGPSGERGLAGLPGREGAPGPSGPPGPPGSTGVPGASGLKGD 2424

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G PG  G+PG  G  GE G+ G  G  G+ G  G+ G P     + E
Sbjct: 2425 KGDPGA-GLPGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGE 2471



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 77/162 (47%), Gaps = 21/162 (12%)

Query: 137  GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRI 193
            GE+G  G+ GP GPQG PG  G  G KGD G PG  G  G +   G  GP G  G  G+ 
Sbjct: 1711 GERGVSGLQGPAGPQGDPGVRGPAGEKGDRGPPGLDGRGGLDGKPGATGPPGLHGATGKA 1770

Query: 194  GLDGRDGLPG------------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            G  GRDGLPG                  +PG DG PG NG +G PG  G  G+ G  G +
Sbjct: 1771 GDPGRDGLPGLRGEHGPPGPPGPPGAQGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDS 1830

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
            G  G +G  GP+G RG  G  G+ G P +      S    P 
Sbjct: 1831 GAPGREGHDGPKGERGAPGSPGLQGPPGLPGQVGPSGQGFPG 1872



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 88/210 (41%), Gaps = 67/210 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP----------------------PG 149
            PG +GP+G+      KG+ G  GE G  G+PG  GP                       G
Sbjct: 1631 PGARGPVGE------KGDQGDPGEDGRNGSPGPSGPKGDRGEPGPPGLPGRLVDPGLGAG 1684

Query: 150  PQGIPGDEGK------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
             +G PGD G+                  RG  G  G  GPQG PG  G  G KGD G PG
Sbjct: 1685 EKGEPGDRGQEGPRGPKGDPGPPGASGERGVSGLQGPAGPQGDPGVRGPAGEKGDRGPPG 1744

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG---------------------KDG 230
              G  G DG PG  G  G+ G  G  G PG+DGLPG                     +DG
Sbjct: 1745 LDGRGGLDGKPGATGPPGLHGATGKAGDPGRDGLPGLRGEHGPPGPPGPPGAQGKPGEDG 1804

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG NG NGE G  G  G +G+ G +G PG
Sbjct: 1805 KPGLNGKNGEPGDPGEDGRKGEKGDSGAPG 1834



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 59/115 (51%), Gaps = 20/115 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------------VVGPPGP--Q 151
            PGL GP G  GE G  GE G +GE+GE+G  G                   V  PGP   
Sbjct: 2010 PGLPGPAGGTGEAGRPGERGERGEKGERGEQGRDGTPGLPGPPGPPGPKVTVEEPGPGLS 2069

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            G+ G  G +G KG+ G  G QG  GD G  G KGD G PG+ GLDG  GLPGE G
Sbjct: 2070 GVQGPPGFKGAKGEPGSDGNQGPKGDRGVPGLKGDRGEPGQRGLDGSLGLPGERG 2124



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 72/157 (45%), Gaps = 29/157 (18%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGI- 153
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG   ++GP G +G  
Sbjct: 2594 GVKGACGLDGEKGDKGEAGPPGRPGLAGRKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2653

Query: 154  --PGDEGKRGPKGDMGYPGPQGIPG---------------------DEGKRGPKGDMGYP 190
              PG +G +G KG+ G PG  G PG                      EG +G KG+ G P
Sbjct: 2654 GQPGSKGDQGEKGERGLPGTGGFPGPRGSDGATGPPGPPGSVGPKGPEGLQGQKGERGPP 2713

Query: 191  GR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G   +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 2714 GERVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAAL 2750



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 96/249 (38%), Gaps = 81/249 (32%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIPGDE 157
            GF  +  E    G QGP G +G  G KG+ G  G+RG  G+   PG  G   P  I G +
Sbjct: 2076 GFKGAKGEPGSDGNQGPKGDRGVPGLKGDRGEPGQRGLDGSLGLPGERGSEAPFSIQGLQ 2135

Query: 158  GKR---------------------------GPKGDMGYPG-------------------- 170
            G R                           GP G  G PG                    
Sbjct: 2136 GPRGTPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLPG 2195

Query: 171  ---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDG 218
                     PQG PG  G+ G  G  G PGR G  G+D   G PG PG  G+PG  G  G
Sbjct: 2196 PPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGVPGSPGLPGPVGPKG 2255

Query: 219  IPGKDGLPGKD--GIPGTN-----------------GTNGEKGMTGPRGNRGKSGINGVP 259
             PG  G PG+   G+PG                   G  G++G+ GPRG +G++G  G P
Sbjct: 2256 EPGPMGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP 2315

Query: 260  GTPAICAYK 268
            G P    +K
Sbjct: 2316 GDPGEDGHK 2324



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 65/136 (47%), Gaps = 30/136 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------ 158
            PPG  GP G +G  GA GE G KGERG        GP GPQG+PG  G            
Sbjct: 1441 PPGDIGPKGDRGLKGAVGETGEKGERGS------AGPVGPQGLPGVAGRPGAEGPEGPPG 1494

Query: 159  ---KRGPKGDMGYPG-PQGIPGDEGKRGPKGDMGYPGRIGLDGRDG--------LPGEPG 206
               +RG KG+ G PG P   P   G +G KGD+G  G  G  G  G        LPG+PG
Sbjct: 1495 PAGRRGEKGEPGRPGDPAVGPDGAGAKGEKGDVGPAGPRGAAGVKGERGPPGLVLPGDPG 1554

Query: 207  LDGIPGRNGMDGIPGK 222
              G PG  G  G+ G+
Sbjct: 1555 PKGDPGDRGPIGLTGR 1570



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 78/183 (42%), Gaps = 46/183 (25%)

Query: 137  GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGDEGK---------- 180
            G KG+PG    PGP+G PG+ G RGPKG+ G PG        G+PG +G           
Sbjct: 1292 GSKGSPGW---PGPRGEPGERGPRGPKGEPGEPGQVIGGEGPGLPGRKGDPGPPGLPGSR 1348

Query: 181  -------------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                               +G KGD G  G  G       PGEPGL G+PG  G  G  G
Sbjct: 1349 GPLGDPGPRGPPGLPGTAVKGDKGDRGERGPPGSGDGGTAPGEPGLPGLPGSPGPQGPVG 1408

Query: 222  KDGLPGKDG--------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
              G  G+ G        +PG  G+ GE+G+ GP G+ G  G  G+ G       K E  S
Sbjct: 1409 PSGQKGEKGDCEDGAPGLPGQPGSPGERGLRGPPGDIGPKGDRGLKGAVGETGEKGERGS 1468

Query: 274  LLP 276
              P
Sbjct: 1469 AGP 1471



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 94/223 (42%), Gaps = 63/223 (28%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIG------------------QKGEIGAKGEMGVKGERGE 138
            + + G   S   +   GLQGP G                    G  G +G  G+KGE GE
Sbjct: 2117 LGLPGERGSEAPFSIQGLQGPRGTPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGE 2176

Query: 139  -----------------------------KGAPGV---VGPPGPQGIPGDEGKRGPKGDM 166
                                         +GAPG+   VG  G  G PG +G  G  GD 
Sbjct: 2177 TGPPGRGLPGPTGAVGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGAGGKDGDR 2236

Query: 167  GYPGPQGIPGDEGKRGPKGD---MGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGM 216
            G PG  G PG  G  GPKG+   MG PG+  +GL G  G  G PG     L G PG  G 
Sbjct: 2237 GAPGVPGSPGLPGPVGPKGEPGPMGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGD 2296

Query: 217  DGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G+P   G+ G  G+ G PG  G +G KG  G +G++G +G+ 
Sbjct: 2297 RGLPGPRGEKGEAGRAGEPGDPGEDGHKGTPGLKGSKGDAGVG 2339



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 81/192 (42%), Gaps = 57/192 (29%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER----------------------------GEKGAPG 143
            PG +GP G++G IG  GE G+KG+R                            G+ G PG
Sbjct: 1952 PGERGPPGKEGRIGFSGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPG 2011

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI-----------------------PGDEGK 180
            + GP G  G  G  G+RG +G+ G  G QG                        PG  G 
Sbjct: 2012 LPGPAGGTGEAGRPGERGERGEKGERGEQGRDGTPGLPGPPGPPGPKVTVEEPGPGLSGV 2071

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            +GP G  G  G  G DG  G  G+    G+PG  G  G PG+ GL G  G+PG  G+   
Sbjct: 2072 QGPPGFKGAKGEPGSDGNQGPKGD---RGVPGLKGDRGEPGQRGLDGSLGLPGERGSEAP 2128

Query: 241  ---KGMTGPRGN 249
               +G+ GPRG 
Sbjct: 2129 FSIQGLQGPRGT 2140



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 82/197 (41%), Gaps = 53/197 (26%)

Query: 111  PPGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            PPG +G  G+ G     G KG+ GV G +G++G PG  G  G  G+PG+ G   P    G
Sbjct: 2074 PPGFKGAKGEPGSDGNQGPKGDRGVPGLKGDRGEPGQRGLDGSLGLPGERGSEAPFSIQG 2133

Query: 168  YPGPQGI------------------PGDEGKRGPKGDMGYPGR----------------- 192
              GP+G                    G  G +GP G  G PG                  
Sbjct: 2134 LQGPRGTPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGL 2193

Query: 193  ---------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
                     +G  G  GLPG+ G  G PG  G DG  GKDG  G  G+PG+       G+
Sbjct: 2194 PGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGVPGS------PGL 2247

Query: 244  TGPRGNRGKSGINGVPG 260
             GP G +G+ G  G PG
Sbjct: 2248 PGPVGPKGEPGPMGAPG 2264



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 80/224 (35%), Gaps = 99/224 (44%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD-------------------- 156
            G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD                    
Sbjct: 1522 GEKGDVGPAGPRGAAGVKGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPG 1581

Query: 157  -------------------EGKRGPKGD------------MGYPGPQGIPGDEGKRGPKG 185
                               +G+ G KGD             G  G +G PG  G  G KG
Sbjct: 1582 EKGDSGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKG 1641

Query: 186  DMGYPGRIGLDGRDGLPG---------------------EPGLD----GIPGRNGMD--- 217
            D G PG    DGR+G PG                     +PGL     G PG  G +   
Sbjct: 1642 DQGDPGE---DGRNGSPGPSGPKGDRGEPGPPGLPGRLVDPGLGAGEKGEPGDRGQEGPR 1698

Query: 218  ---------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                           G+ G  G  G  G PG  G  GEKG  GP
Sbjct: 1699 GPKGDPGPPGASGERGVSGLQGPAGPQGDPGVRGPAGEKGDRGP 1742



 Score = 39.3 bits (90), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 85/233 (36%), Gaps = 86/233 (36%)

Query: 113  GLQGPIGQKGEIGAKGE-------MGVKG-----------------------ERGEKGAP 142
            GL G  G +G+ G+ G        +G+K                         RG KG P
Sbjct: 1893 GLPGERGLRGDPGSVGNVERLLETIGIKTSALREIVETWDESSGSFLPMPERRRGPKGEP 1952

Query: 143  GVVGPPGPQGIPGDEGKRGPKGDM----------------------------------GY 168
            G  GPPG +G  G  G+RG KGD                                   G 
Sbjct: 1953 GERGPPGKEGRIGFSGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGL 2012

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------------PGEPGLDGI 210
            PGP G  G+ G+ G +G+ G  G  G  GRDG                   PG PGL G+
Sbjct: 2013 PGPAGGTGEAGRPGERGERGEKGERGEQGRDGTPGLPGPPGPPGPKVTVEEPG-PGLSGV 2071

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                G  G  G  G PG DG  G  G  G  G+ G RG  G+ G++G  G P 
Sbjct: 2072 ---QGPPGFKGAKGEPGSDGNQGPKGDRGVPGLKGDRGEPGQRGLDGSLGLPG 2121


>gi|348540048|ref|XP_003457500.1| PREDICTED: collagen alpha-1(VI) chain-like [Oreochromis niloticus]
          Length = 1007

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 87/167 (52%), Gaps = 19/167 (11%)

Query: 104 NSTKEYC-------PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           N TK+ C       P G +GP G  G  G +G  G+ GE+G+ G  G +G PGP G  G 
Sbjct: 233 NETKDVCCSFDCVAPGGDKGPDGDSGSKGERGRPGMPGEKGDIGDVGRIGDPGPVGYSGM 292

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---PGR 213
           +G RGP+GD G  G +G  GD+G+R         G+ G+DGR G PG PGL G    PG+
Sbjct: 293 KGDRGPRGDKGERGHKGYKGDKGQR---------GKDGIDGRKGEPGFPGLAGCKGSPGQ 343

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G  G  G  G PG  GI G  G  G  G  G  GN G  G  G PG
Sbjct: 344 DGSQGESGPKGDPGSYGIKGEKGDRGRDGEPGRPGNYGPLGPKGDPG 390



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 85/178 (47%), Gaps = 31/178 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
           G  GP G  G  G KGE G +G  GE G PG  GP GP+G PG    RGP GD       
Sbjct: 348 GESGPKGDPGSYGIKGEKGDRGRDGEPGRPGNYGPLGPKGDPG---PRGPDGDKGERGDD 404

Query: 166 -----------MGYPGPQGIPGDEGKRGPKGDMGYP------GRIGLDGRDGLPGEPGLD 208
                       G PG +G  G  G RGP+G+ G P      GR G  GR+G PGE G  
Sbjct: 405 GLPGDDGPPGEKGLPGEKGEQGSRGNRGPRGEPGDPGPRGEQGREGTTGRNGAPGEAGKP 464

Query: 209 GIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G PG  G +G  G +G  G+ GI   PG  G  GE+G  G  GN G  G +G  G P 
Sbjct: 465 GPPGYRGDEGPAGPEGPKGQRGIKGAPGDRGPMGERGEDGAPGN-GTEGCHGFQGYPG 521



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 78/152 (51%), Gaps = 5/152 (3%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G      E    G +GP G+ G+ G +GE G +G  G  GAPG  G PGP G  GDEG 
Sbjct: 416 KGLPGEKGEQGSRGNRGPRGEPGDPGPRGEQGREGTTGRNGAPGEAGKPGPPGYRGDEGP 475

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            GP+G  G  G +G PGD G  G +G+ G PG  G +G  G  G PG  G PG  G  G 
Sbjct: 476 AGPEGPKGQRGIKGAPGDRGPMGERGEDGAPGN-GTEGCHGFQGYPGPRGDPGEPGGRGT 534

Query: 220 PGKDGLPGKDGIPGTN----GTNGEKGMTGPR 247
           PG  G  G+ G PG +    G  G KG  G R
Sbjct: 535 PGPKGDDGEPGDPGPDNDEPGRPGPKGAKGHR 566



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 79/148 (53%), Gaps = 18/148 (12%)

Query: 119 GQKGEIGAKGEMGVKGE------RGEK---------GAPGVVGPPGPQGIPGDEGKRGPK 163
           G+KGE G++G  G +GE      RGE+         GAPG  G PGP G  GDEG  GP+
Sbjct: 420 GEKGEQGSRGNRGPRGEPGDPGPRGEQGREGTTGRNGAPGEAGKPGPPGYRGDEGPAGPE 479

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G  G +G PGD G  G +G+ G PG  G +G  G  G PG  G PG  G  G PG  
Sbjct: 480 GPKGQRGIKGAPGDRGPMGERGEDGAPGN-GTEGCHGFQGYPGPRGDPGEPGGRGTPGPK 538

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           G  G+ G PG +  N E G  GP+G +G
Sbjct: 539 GDDGEPGDPGPD--NDEPGRPGPKGAKG 564



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 89/199 (44%), Gaps = 51/199 (25%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G +GP G KGE G KG  G KG+RG+      KG PG  G  G +G PG +G +G  G  
Sbjct: 294 GDRGPRGDKGERGHKGYKGDKGQRGKDGIDGRKGEPGFPGLAGCKGSPGQDGSQGESGPK 353

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG----------------- 209
           G PG  GI G++G RG  G+ G PG  G  G  G PG  G DG                 
Sbjct: 354 GDPGSYGIKGEKGDRGRDGEPGRPGNYGPLGPKGDPGPRGPDGDKGERGDDGLPGDDGPP 413

Query: 210 ----IP------------------------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
               +P                        G  G +G  G++G PG+ G PG  G  G++
Sbjct: 414 GEKGLPGEKGEQGSRGNRGPRGEPGDPGPRGEQGREGTTGRNGAPGEAGKPGPPGYRGDE 473

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G  GP G +G+ GI G PG
Sbjct: 474 GPAGPEGPKGQRGIKGAPG 492



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 64/125 (51%), Gaps = 3/125 (2%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            V P G +G  GD G +G +G  G PG +G  GD G+ G  G +GY G  G  G  G  G
Sbjct: 244 CVAPGGDKGPDGDSGSKGERGRPGMPGEKGDIGDVGRIGDPGPVGYSGMKGDRGPRGDKG 303

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           E G  G  G  G  G   KDG+ G+ G PG  G  G KG  G  G++G+SG  G PG+  
Sbjct: 304 ERGHKGYKGDKGQRG---KDGIDGRKGEPGFPGLAGCKGSPGQDGSQGESGPKGDPGSYG 360

Query: 264 ICAYK 268
           I   K
Sbjct: 361 IKGEK 365



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 63/135 (46%), Gaps = 24/135 (17%)

Query: 150 PQGIPGDEGKRGPKGDMGYPGPQGIPGD---------------------EGKRGPKGDMG 188
           P G  G +G  G KG+ G PG   +PG+                     +G RGP+GD G
Sbjct: 247 PGGDKGPDGDSGSKGERGRPG---MPGEKGDIGDVGRIGDPGPVGYSGMKGDRGPRGDKG 303

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G  G  G  G  G+ G+DG  G  G  G+ G  G PG+DG  G +G  G+ G  G +G
Sbjct: 304 ERGHKGYKGDKGQRGKDGIDGRKGEPGFPGLAGCKGSPGQDGSQGESGPKGDPGSYGIKG 363

Query: 249 NRGKSGINGVPGTPA 263
            +G  G +G PG P 
Sbjct: 364 EKGDRGRDGEPGRPG 378



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 48/104 (46%), Gaps = 5/104 (4%)

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G +GP GD G  G     GR G+PGE G  G  GR G  G  G  G+ G  G  G  G  
Sbjct: 249 GDKGPDGDSGSKGE---RGRPGMPGEKGDIGDVGRIGDPGPVGYSGMKGDRGPRGDKGER 305

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
           G KG  G +G RGK GI+G  G P         C   P  + SQ
Sbjct: 306 GHKGYKGDKGQRGKDGIDGRKGEPGFPGLA--GCKGSPGQDGSQ 347


>gi|373432747|ref|NP_001243295.1| macrophage receptor MARCO [Sus scrofa]
 gi|372098606|gb|AEX66158.1| macrophage receptor [Sus scrofa]
          Length = 395

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 91/180 (50%), Gaps = 6/180 (3%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGYPGPQ---GI 174
           KGE G KG+MG+KG+ G  G PG  G  G  G+PG  G  G    KGD G PG +   G+
Sbjct: 128 KGETGRKGDMGMKGDMGLMGPPGARGHKGDLGMPGSPGVAGVPGLKGDQGQPGTRGLPGL 187

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G  G KG+ G PG  G  G  G PG PG +G+ G  G  G+ G+ G  G+ G PG 
Sbjct: 188 PGAAGSPGAKGEPGSPGLTGPTGPAGSPGSPGAEGLKGSKGDTGLQGQKGTKGESGFPGP 247

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEH 294
            G  GEKG  G  G+RG  G+ G  G P          +     E  + ++   I+GS +
Sbjct: 248 AGLKGEKGSRGLEGSRGAPGLGGQKGEPGAKGSSGLQGAKGAKGEKGESMLSVRIIGSRN 307



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 61/125 (48%), Gaps = 30/125 (24%)

Query: 112 PGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------------ 156
           PGL+G  GQ   +G  G  G  G  G +GE G+PG+ GP GP G PG             
Sbjct: 170 PGLKGDQGQPGTRGLPGLPGAAGSPGAKGEPGSPGLTGPTGPAGSPGSPGAEGLKGSKGD 229

Query: 157 ---EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG------------RIGLDGRDGL 201
              +G++G KG+ G+PGP G+ G++G RG +G  G PG              GL G  G 
Sbjct: 230 TGLQGQKGTKGESGFPGPAGLKGEKGSRGLEGSRGAPGLGGQKGEPGAKGSSGLQGAKGA 289

Query: 202 PGEPG 206
            GE G
Sbjct: 290 KGEKG 294


>gi|395856389|ref|XP_003800611.1| PREDICTED: collagen alpha-1(VII) chain [Otolemur garnettii]
          Length = 2935

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/190 (41%), Positives = 100/190 (52%), Gaps = 33/190 (17%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG------APGVVGP---P 148
             ++G      E  P G+ G  G +G+IG  G+ G+KGE G+KG      A G +GP   P
Sbjct: 2524 GLRGAKGDMGERGPQGVDGDRGPRGDIGMPGDKGIKGEPGDKGSAGSMGARGPIGPKGEP 2583

Query: 149  GPQGIPGDEGK---------RGPKGDMGYPGPQGIPGD---------EGKRGPKGDMGYP 190
            G  G PGD G          RG KGD+G+ GP+G+ G+         +G++G KG+ G P
Sbjct: 2584 GAAGFPGDPGSPGKDGAPGVRGDKGDIGFMGPRGLKGERGVKGACGLDGEKGDKGEAGVP 2643

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            GR GL GR G  GEPG+ G PG  G +G+ G  G  G DG PG  G  GEK      G R
Sbjct: 2644 GRSGLAGRKGELGEPGMPGQPGAPGKEGLIGPKGDRGFDGQPGPKGDQGEK------GER 2697

Query: 251  GKSGINGVPG 260
            G  GI G PG
Sbjct: 2698 GSPGIGGFPG 2707



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 92/173 (53%), Gaps = 10/173 (5%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG-APGVVGPPGPQGIPGD---------E 157
            +  P GL GP G +GE G KG+ G  G +G+KG +  +VGPPG +G  GD         +
Sbjct: 2482 QEGPRGLMGPPGSRGERGEKGDAGATGLKGDKGDSAMIVGPPGLRGAKGDMGERGPQGVD 2541

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G RGP+GD+G PG +GI G+ G +G  G MG  G IG  G  G  G PG  G PG++G  
Sbjct: 2542 GDRGPRGDIGMPGDKGIKGEPGDKGSAGSMGARGPIGPKGEPGAAGFPGDPGSPGKDGAP 2601

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+ G  G  G  G  G  G  G KG  G  G +G  G  GVPG   +   K E
Sbjct: 2602 GVRGDKGDIGFMGPRGLKGERGVKGACGLDGEKGDKGEAGVPGRSGLAGRKGE 2654



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 98/184 (53%), Gaps = 27/184 (14%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKG 164
            PPGL+G    KG++G +G  GV G+RG +G  G+ G  G +G PGD+G       RGP G
Sbjct: 2522 PPGLRG---AKGDMGERGPQGVDGDRGPRGDIGMPGDKGIKGEPGDKGSAGSMGARGPIG 2578

Query: 165  DMGYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
              G PG  G PGD G          RG KGD+G+ G  GL G  G+ G  GLDG  G  G
Sbjct: 2579 PKGEPGAAGFPGDPGSPGKDGAPGVRGDKGDIGFMGPRGLKGERGVKGACGLDGEKGDKG 2638

Query: 216  MDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
              G+PG+ GL G+       G+PG  G  G++G+ GP+G+R   G +G PG       K 
Sbjct: 2639 EAGVPGRSGLAGRKGELGEPGMPGQPGAPGKEGLIGPKGDR---GFDGQPGPKGDQGEKG 2695

Query: 270  ESCS 273
            E  S
Sbjct: 2696 ERGS 2699



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 92/196 (46%), Gaps = 48/196 (24%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--------------------------VG 146
            GL GP G+KGE G  GE G  GE G+KGAPG+                          +G
Sbjct: 2327 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGLKGQKGDPGIGLLGPPGPTGSPGMKGDLG 2386

Query: 147  PPGPQGIPGD---EGKRGPKGDMGYPGPQGIPGDEGKRGPKG---------------DMG 188
            PPG  G PG     G+ GP+G+ G PGP    G+ G  GP G                +G
Sbjct: 2387 PPGALGAPGIVGFPGQPGPRGETGQPGPS---GERGLAGPPGREGAPGPSGPPGSPGSVG 2443

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             PG  GL G  G PG  GL G+ G  G  G+ G+DG PG++G  G  G  G +G  G +G
Sbjct: 2444 APGASGLKGDKGDPGA-GLPGLRGERGEPGVRGEDGHPGQEGPRGLMGPPGSRGERGEKG 2502

Query: 249  NRGKSGINGVPGTPAI 264
            + G +G+ G  G  A+
Sbjct: 2503 DAGATGLKGDKGDSAM 2518



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 89/189 (47%), Gaps = 24/189 (12%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPG 149
            +G      E  PPG +GPIG  GE G KGE G            GERG  G+PG+ G PG
Sbjct: 1975 RGLKGEQGERGPPGKEGPIGFPGERGLKGERGDPGPQGPPGLALGERGPPGSPGLAGEPG 2034

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG----------DMGYPGRIGLDGRD 199
              GIPG  G  G  G+ G PG +G  G++G+RG +G                ++ +D   
Sbjct: 2035 KPGIPGLPGSAGSAGETGRPGEKGERGEKGERGEQGRDGSPGLPGPPGPPGPKVAMDELG 2094

Query: 200  G-LPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
              LPGE   PG  G  G  G  G PG  G  G  GI G  G  G++G+ G  G  G+ GI
Sbjct: 2095 SRLPGEQGPPGFKGAKGEPGSAGDPGPTGDRGIPGIKGERGEPGQRGLNGSPGLPGERGI 2154

Query: 256  NGVPGTPAI 264
             G  G P +
Sbjct: 2155 AGPEGKPGL 2163



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 91/212 (42%), Gaps = 67/212 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------------------- 150
            GL+GP G +G IG KG+ G  GE G  G+PG  GP G                       
Sbjct: 1655 GLRGPPGARGPIGEKGDQGDPGEDGRNGSPGPSGPKGDRGEPGPPGPPGRLVDIELGARE 1714

Query: 151  QGIPGDEGK------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            +G PGD G+                  RG  G  G PG QG PG  G  G KGD G PG 
Sbjct: 1715 KGKPGDRGQEGPRGPKGDPGPPGAPGERGNDGLRGPPGQQGDPGVRGPAGEKGDRGPPG- 1773

Query: 193  IGLDGRDGLP------------GEPGLDGIPGRNGMDGIPGKD------------GLPGK 228
              LDGR GL             G  G  G PGR+G+ G+ G+             G PG+
Sbjct: 1774 --LDGRSGLDGKPGPIGPPGLNGAAGKAGDPGRDGLPGLRGEHGPPGPPGFPGALGKPGE 1831

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            DG PG NG NGE G  G  G +G+ G  G PG
Sbjct: 1832 DGKPGLNGKNGEPGDPGEDGRKGEKGDTGTPG 1863



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 82/168 (48%), Gaps = 37/168 (22%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVG----------------------------- 146
            GP G +GE G+KGE G+ GERG +G PG +                              
Sbjct: 1907 GPKGDRGETGSKGEQGLPGERGLRGEPGSMANVERLLENMGIKASALREIVETWDESSGS 1966

Query: 147  ----PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD-GRDGL 201
                P   +G+ G++G+RGP G  G   P G PG+ G +G +GD G  G  GL  G  G 
Sbjct: 1967 FLPLPDRRRGLKGEQGERGPPGKEG---PIGFPGERGLKGERGDPGPQGPPGLALGERGP 2023

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PG PGL G PG+ G+ G+PG  G  G+ G PG  G  GEKG  G +G 
Sbjct: 2024 PGSPGLAGEPGKPGIPGLPGSAGSAGETGRPGEKGERGEKGERGEQGR 2071



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 81/174 (46%), Gaps = 41/174 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---GYP 169
            G  GP G KGE G KG  G+ GE+G+KG           G+PG  G  G KG++   G P
Sbjct: 2611 GFMGPRGLKGERGVKGACGLDGEKGDKGE---------AGVPGRSGLAGRKGELGEPGMP 2661

Query: 170  GPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMD--------- 217
            G  G PG EG  GPKGD G+   PG  G  G  G  G PG+ G PG  G D         
Sbjct: 2662 GQPGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGSPGIGGFPGPRGNDGASGPPGPP 2721

Query: 218  ---GIPGKDGLPGKDGIPGTNGTN--------------GEKGMTGPRGNRGKSG 254
               G  G +GL G+ G  G +G +              GE+G  GP G RG+ G
Sbjct: 2722 GSVGPKGPEGLQGQKGERGPSGESVVGAPGAPGAPGERGEQGRPGPAGPRGEKG 2775



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
               K  C  GL G  G KGE G  G  G+ G +GE G PG+   PG  G PG EG  GPK
Sbjct: 2622 RGVKGAC--GLDGEKGDKGEAGVPGRSGLAGRKGELGEPGM---PGQPGAPGKEGLIGPK 2676

Query: 164  GDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
            GD G+   PGP+G  G++G+RG  G  G+PG  G D
Sbjct: 2677 GDRGFDGQPGPKGDQGEKGERGSPGIGGFPGPRGND 2712



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 65/130 (50%), Gaps = 26/130 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------------VGP--P 148
            PGL G  G  GE G  GE G +GE+GE+G  G                      +G   P
Sbjct: 2039 PGLPGSAGSAGETGRPGEKGERGEKGERGEQGRDGSPGLPGPPGPPGPKVAMDELGSRLP 2098

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G QG PG +G +G  G  G PGP G   D G  G KG+ G PG+ GL+G  GLPGE G+ 
Sbjct: 2099 GEQGPPGFKGAKGEPGSAGDPGPTG---DRGIPGIKGERGEPGQRGLNGSPGLPGERGIA 2155

Query: 209  GIPGRNGMDG 218
            G  G+ G+ G
Sbjct: 2156 GPEGKPGLQG 2165



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 85/156 (54%), Gaps = 3/156 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG--ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            PGL G  G++G +GA GE G KG  E G  G PG  G PG +G+ G  G  GPKGD G  
Sbjct: 1423 PGLPGSPGRQGPVGAPGEKGEKGDCEDGAPGLPGQPGTPGERGLRGPPGIIGPKGDQGLT 1482

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G  G  G++G+RGP G +G  G  G+ GR G  G  G  G  GR G  G PG+ G P   
Sbjct: 1483 GVPGKTGEQGERGPPGPVGPQGLPGVAGRPGAEGPEGPPGPAGRRGEKGEPGRPGDPAVV 1542

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G P T G  GEKG  GP G RG  G+ G  G P + 
Sbjct: 1543 G-PTTPGAKGEKGDVGPTGPRGAPGVKGDQGPPGLV 1577



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 76/159 (47%), Gaps = 35/159 (22%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP----- 175
            KG++G  G +         GAPG+VG PG  G  G+ G+ GP G+ G  GP G       
Sbjct: 2382 KGDLGPPGAL---------GAPGIVGFPGQPGPRGETGQPGPSGERGLAGPPGREGAPGP 2432

Query: 176  ----------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                      G  G  G KGD G PG        GLPG  G  G PG  G DG PG++G 
Sbjct: 2433 SGPPGSPGSVGAPGASGLKGDKGDPG-------AGLPGLRGERGEPGVRGEDGHPGQEGP 2485

Query: 226  PGKDGIPGTNGTNGEK---GMTGPRGNRGKSG-INGVPG 260
             G  G PG+ G  GEK   G TG +G++G S  I G PG
Sbjct: 2486 RGLMGPPGSRGERGEKGDAGATGLKGDKGDSAMIVGPPG 2524



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 93/249 (37%), Gaps = 93/249 (37%)

Query: 108  EYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            E  PPG +G  G+    G+ G  G+ G+ G +GE+G PG  G  G  G+PG+ G  GP+G
Sbjct: 2100 EQGPPGFKGAKGEPGSAGDPGPTGDRGIPGIKGERGEPGQRGLNGSPGLPGERGIAGPEG 2159

Query: 165  DMGYPGPQG------------------IPGDEGKRGPKGDMGYPGR-------------- 192
              G  GP+G                  + G  G +GP G  G PG               
Sbjct: 2160 KPGLQGPRGSPGPVGGHGDPGPPGSPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGA 2219

Query: 193  ------------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                                    +G  G+ G PG  G  G  G  G+ G+PG  GLPG 
Sbjct: 2220 VGLPGPSGPPGLVGPQGPPGLPGQVGETGKPGAPGRDGASGKDGDRGIPGVPGSPGLPGP 2279

Query: 229  -----------------DGIPGTN-----------------GTNGEKGMTGPRGNRGKSG 254
                              G PGT                  G  G++G+ GPRG +G++G
Sbjct: 2280 VGPKGEPGPMGPPGQVVVGPPGTKGEKGAPGDLAGDLLGEPGAKGDRGLPGPRGEKGEAG 2339

Query: 255  INGVPGTPA 263
              G PG P 
Sbjct: 2340 RAGEPGDPG 2348



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 75/191 (39%), Gaps = 60/191 (31%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------------- 162
            +G+ G+ GA G  G  G+ G++G PGV         PG  G  GP               
Sbjct: 2244 VGETGKPGAPGRDGASGKDGDRGIPGV---------PGSPGLPGPVGPKGEPGPMGPPGQ 2294

Query: 163  --------KGDMGYP--------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                    KG+ G P              G +G+PG  G++G  G  G PG  G DG+ G
Sbjct: 2295 VVVGPPGTKGEKGAPGDLAGDLLGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKG 2354

Query: 201  LPGEPGLDGIPG--------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             PG  G  G PG                G  G PG  G PG  G PG  G  GE G  GP
Sbjct: 2355 APGLKGQKGDPGIGLLGPPGPTGSPGMKGDLGPPGALGAPGIVGFPGQPGPRGETGQPGP 2414

Query: 247  RGNRGKSGING 257
             G RG +G  G
Sbjct: 2415 SGERGLAGPPG 2425



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 85/192 (44%), Gaps = 53/192 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---------------------KGAPGVVGPPGPQ 151
            GL+GP GQ+G+ G +G  G KG+RG                       GA G  G PG  
Sbjct: 1746 GLRGPPGQQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGPIGPPGLNGAAGKAGDPGRD 1805

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G+PG  G+ GP G  G+PG  G PG++GK G  G  G PG  G DGR    GE G  G P
Sbjct: 1806 GLPGLRGEHGPPGPPGFPGALGKPGEDGKPGLNGKNGEPGDPGEDGRK---GEKGDTGTP 1862

Query: 212  GRNGMDGIPGKDGLPGK-----------------------------DGIPGTNGTNGEKG 242
            GR G DG  G+ G PG                               G  G  G+ GE+G
Sbjct: 1863 GREGHDGPKGERGAPGSPGLQGPPGLPGPIGPPGQGFPGVPGSIGPKGDRGETGSKGEQG 1922

Query: 243  MTGPRGNRGKSG 254
            + G RG RG+ G
Sbjct: 1923 LPGERGLRGEPG 1934



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 72/146 (49%), Gaps = 27/146 (18%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            +G  G++G  G++G PGV GP       G++G RGP G  G     G+ G  G  GP G 
Sbjct: 1742 RGNDGLRGPPGQQGDPGVRGP------AGEKGDRGPPGLDGR---SGLDGKPGPIGPPGL 1792

Query: 187  MGYPGRIGLDGRDGLP------------------GEPGLDGIPGRNGMDGIPGKDGLPGK 228
             G  G+ G  GRDGLP                  G+PG DG PG NG +G PG  G  G+
Sbjct: 1793 NGAAGKAGDPGRDGLPGLRGEHGPPGPPGFPGALGKPGEDGKPGLNGKNGEPGDPGEDGR 1852

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  GT G +G  GP+G RG  G
Sbjct: 1853 KGEKGDTGTPGREGHDGPKGERGAPG 1878



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 85/234 (36%), Gaps = 97/234 (41%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGP--------------------------------- 147
            KG+ G  GEMG+KG+ G  GAPG+ G                                  
Sbjct: 1253 KGQKGEPGEMGLKGQAGSPGAPGLPGRTGVPGPQGPPGSTIAKGERGSPGADGPPGSPGQ 1312

Query: 148  ------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG- 200
                  PG +G PG  G RG  G+ G  GP+G PG  G+    G+ G PG+ G  G  G 
Sbjct: 1313 PGIPGIPGLKGSPGWPGPRGEVGERGPRGPKGEPGAPGQVIGGGEPGLPGQKGDSGPSGP 1372

Query: 201  ----------------------------------------------LPGEPGLDGIPGRN 214
                                                           PG PGL G PGR 
Sbjct: 1373 TGPQGPMGDPGPRGPPGLPGISVKGDKGDRGERGPPGPGDGGTAPGEPGLPGLPGSPGRQ 1432

Query: 215  GMDGIPGKD-----------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G PG+            GLPG+ G PG  G  G  G+ GP+G++G +G+ G
Sbjct: 1433 GPVGAPGEKGEKGDCEDGAPGLPGQPGTPGERGLRGPPGIIGPKGDQGLTGVPG 1486



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 62/139 (44%), Gaps = 43/139 (30%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGE---------------------------------RG 137
            PPG+ GP G +G  G  G+ G +GE                                 RG
Sbjct: 1469 PPGIIGPKGDQGLTGVPGKTGEQGERGPPGPVGPQGLPGVAGRPGAEGPEGPPGPAGRRG 1528

Query: 138  EKGAPG------VVGP--PGPQGIPGDEGKRGPKGDMGYPGPQGIPG--DEGKRGPKGDM 187
            EKG PG      VVGP  PG +G  GD G  GP+G  G  G QG PG    G  GPKGD 
Sbjct: 1529 EKGEPGRPGDPAVVGPTTPGAKGEKGDVGPTGPRGAPGVKGDQGPPGLVLPGDPGPKGDP 1588

Query: 188  GYPGRIGLDGRDGLPGEPG 206
            G  G IGL GR G PG+ G
Sbjct: 1589 GDRGPIGLTGRAGPPGDSG 1607



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 83/186 (44%), Gaps = 53/186 (28%)

Query: 130  MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP- 183
            +G  G +GEKGAPG     ++G PG +G  G  G RG KG+ G  G  G PG++G++G  
Sbjct: 2297 VGPPGTKGEKGAPGDLAGDLLGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAP 2356

Query: 184  --KGDMGYPGRIGL------------DGRDGLPGEPGLDGI------PGRNGMDGIPGKD 223
              KG  G PG IGL             G  G PG  G  GI      PG  G  G PG  
Sbjct: 2357 GLKGQKGDPG-IGLLGPPGPTGSPGMKGDLGPPGALGAPGIVGFPGQPGPRGETGQPGPS 2415

Query: 224  GL------PGKD---------------GIPGTNGTNGEK-----GMTGPRGNRGKSGING 257
            G       PG++               G PG +G  G+K     G+ G RG RG+ G+ G
Sbjct: 2416 GERGLAGPPGREGAPGPSGPPGSPGSVGAPGASGLKGDKGDPGAGLPGLRGERGEPGVRG 2475

Query: 258  VPGTPA 263
              G P 
Sbjct: 2476 EDGHPG 2481



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 49/89 (55%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G C    E    G  G  G+ G  G KGE+G  G  G+ GAPG  G  GP+G  G +
Sbjct: 2623 GVKGACGLDGEKGDKGEAGVPGRSGLAGRKGELGEPGMPGQPGAPGKEGLIGPKGDRGFD 2682

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            G+ GPKGD G  G +G PG  G  GP+G+
Sbjct: 2683 GQPGPKGDQGEKGERGSPGIGGFPGPRGN 2711



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 75/149 (50%), Gaps = 29/149 (19%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            G  G+KG++G  G  G  G +G++G PG+V  G PGP+G PGD   RGP G  G  GP  
Sbjct: 1548 GAKGEKGDVGPTGPRGAPGVKGDQGPPGLVLPGDPGPKGDPGD---RGPIGLTGRAGP-- 1602

Query: 174  IPGDEGKRGPKGDMGYP------------GRIGLDGRDGLP---------GEPGLDGIPG 212
             PGD G  G KGD G P            G +G  G +G P         GE GL G PG
Sbjct: 1603 -PGDSGPLGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKVGERGLRGPPG 1661

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
              G  G  G  G PG+DG  G+ G +G K
Sbjct: 1662 ARGPIGEKGDQGDPGEDGRNGSPGPSGPK 1690



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 72/188 (38%), Gaps = 59/188 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QGP G KG  G  G  G  G  G++G PG+      +G  G+ G+RG  G  G PG 
Sbjct: 2098 PGEQGPPGFKGAKGEPGSAGDPGPTGDRGIPGI------KGERGEPGQRGLNGSPGLPGE 2151

Query: 172  QGIPGDEGKRGPKGDMG------------------YPGRIGLDGRDGLPGEPGLDGIP-- 211
            +GI G EGK G +G  G                    G  G  G  GL GEPG  G P  
Sbjct: 2152 RGIAGPEGKPGLQGPRGSPGPVGGHGDPGPPGSPGLAGPAGPQGPSGLKGEPGETGPPGR 2211

Query: 212  ---------------------------------GRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                             G  G  G PG+DG  GKDG  G  G  
Sbjct: 2212 GLPGPTGAVGLPGPSGPPGLVGPQGPPGLPGQVGETGKPGAPGRDGASGKDGDRGIPGVP 2271

Query: 239  GEKGMTGP 246
            G  G+ GP
Sbjct: 2272 GSPGLPGP 2279



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 81/238 (34%), Gaps = 102/238 (42%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYPGPQ------ 172
            G+ G  G+ G+ G+ GE G PG  G  G +   G PG EG  GPKG+ G PG        
Sbjct: 1827 GKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDTGTPGREGHDGPKGERGAPGSPGLQGPP 1886

Query: 173  --------------------GIPGDEGKRGPKGDMGYPGRIGLDG--------------- 197
                                G  GD G+ G KG+ G PG  GL G               
Sbjct: 1887 GLPGPIGPPGQGFPGVPGSIGPKGDRGETGSKGEQGLPGERGLRGEPGSMANVERLLENM 1946

Query: 198  ---------------------------RDGLPGEPGLDGIPGRNGMDGIPGKDGL----- 225
                                       R GL GE G  G PG+ G  G PG+ GL     
Sbjct: 1947 GIKASALREIVETWDESSGSFLPLPDRRRGLKGEQGERGPPGKEGPIGFPGERGLKGERG 2006

Query: 226  --------------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                                      PGK GIPG  G+ G  G TG  G +G+ G  G
Sbjct: 2007 DPGPQGPPGLALGERGPPGSPGLAGEPGKPGIPGLPGSAGSAGETGRPGEKGERGEKG 2064


>gi|443721531|gb|ELU10822.1| hypothetical protein CAPTEDRAFT_200264 [Capitella teleta]
          Length = 866

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/159 (46%), Positives = 89/159 (55%), Gaps = 6/159 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  G  G +G  G KGE GVKG  G  GA G  G  GPQG+PG  G++G  G+ G  G
Sbjct: 43  PNGFPGVPGLQGSPGLKGEAGVKGAEGRPGATGSEGIAGPQGVPGVPGQQGNPGEPGATG 102

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP------GKDG 224
            QG PG  G  GP+G  G PG+ G  G  G PG+ G+ G PG +G DG P      G  G
Sbjct: 103 AQGHPGPIGSEGPRGRDGAPGKEGTKGDKGTPGQMGVAGRPGYHGRDGQPGAIGPQGATG 162

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           LPG  G PG  G++G +G+ GP G RG  G  G PG+P 
Sbjct: 163 LPGDHGCPGDKGSDGPQGVAGPTGPRGVQGPVGRPGSPG 201



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 86/176 (48%), Gaps = 26/176 (14%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G +GP G+    GA G+ G KG++G  G  GV G PG  G  G  G  GP+G  G PG
Sbjct: 109 PIGSEGPRGRD---GAPGKEGTKGDKGTPGQMGVAGRPGYHGRDGQPGAIGPQGATGLPG 165

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP----------------------GLD 208
             G PGD+G  GP+G  G  G  G+ G  G PG P                      G+ 
Sbjct: 166 DHGCPGDKGSDGPQGVAGPTGPRGVQGPVGRPGSPGYLTSEARREIWTAVFNATETTGIK 225

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G+ G  G  GIPG  GLPGK G+ G +G  G +G  GP+G+ G  G  G  G P I
Sbjct: 226 GVKGERGPFGIPGI-GLPGKKGVMGMSGPPGIQGNQGPKGDPGSIGDPGPRGLPGI 280



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 20/145 (13%)

Query: 123 EIGAKGEMGV--KGERGEKGAPGVVGPPGPQG--------IPGDEGKRGPKGDMGYPGPQ 172
           +IG KG++G   KGE+GE+G  G+VGP GP+G        +PG++G++G +G  G  G  
Sbjct: 472 DIGIKGDLGSGEKGEKGEQGV-GLVGPVGPKGEIGVGIGGLPGNQGEQGVQGIKGQKGEV 530

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG--------IPGKDG 224
           GI G +G  GP+G  G PG   + G  G  GEPGL G+PG  G+ G        + G+ G
Sbjct: 531 GIQGPQGFVGPRGSDGLPGEPAVVG-PGFKGEPGLIGVPGAQGIKGEKGDPGIGLTGQKG 589

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGN 249
             G  G PG  G  G  G TGP+G+
Sbjct: 590 DRGAIGSPGKTGPTGGLGRTGPKGS 614



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 90/207 (43%), Gaps = 34/207 (16%)

Query: 113 GLQGPIGQKGEIG--AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG--DMGY 168
           G++G  G++G  G    G  G KG  G  G PG+ G  GP+G PG  G  GP+G   +  
Sbjct: 223 GIKGVKGERGPFGIPGIGLPGKKGVMGMSGPPGIQGNQGPKGDPGSIGDPGPRGLPGISL 282

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL--DGIPGRNGMDGI------- 219
           PGP+G  G  GK G  G  G  G  G  G  G+PGE G    G PG  G+ GI       
Sbjct: 283 PGPRGSQGQAGKPGAAGKDGGQGEKGEVGSPGIPGERGAPGSGAPGVQGLKGIWCRIWIL 342

Query: 220 ----------PGKDGLPGKDGIPGTNGTNGE------KGMTGPRGNRGKSGIN-----GV 258
                     PG  GL G  G  G  GT GE      KG  GP G  G+ G+      G 
Sbjct: 343 SWFHCMCLGEPGVQGLVGAAGSKGDRGTTGEKGSKGDKGAVGPEGKVGERGMKGDTGAGK 402

Query: 259 PGTPAICAYKRESCSLLPNSETSQLLI 285
           PG   I   K E   L P  +  Q ++
Sbjct: 403 PGVQGIEGNKGEKGDLGPPGQGEQGVM 429



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 94/202 (46%), Gaps = 50/202 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD-----------EGKR 160
           PG+QG +G  G  G +G  G KG +G+KGA G  G  G +G+ GD           EG +
Sbjct: 353 PGVQGLVGAAGSKGDRGTTGEKGSKGDKGAVGPEGKVGERGMKGDTGAGKPGVQGIEGNK 412

Query: 161 GPKGDMGYP--GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---------------- 202
           G KGD+G P  G QG+ G +G+ GPKG++G  G  G  G  G                  
Sbjct: 413 GEKGDLGPPGQGEQGVMGIKGELGPKGEVGETGPKGEKGERGAGDPGVQGVGGVKGEKGD 472

Query: 203 ------------GEPGLDGIP-----GRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKG 242
                       GE G  G+      G  G  G+ G  GLP   G+ G+ G  G  GE G
Sbjct: 473 IGIKGDLGSGEKGEKGEQGVGLVGPVGPKGEIGV-GIGGLPGNQGEQGVQGIKGQKGEVG 531

Query: 243 MTGPRGNRGKSGINGVPGTPAI 264
           + GP+G  G  G +G+PG PA+
Sbjct: 532 IQGPQGFVGPRGSDGLPGEPAV 553



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 88/183 (48%), Gaps = 27/183 (14%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE--KGAPGV------- 144
           +P +++ G   S  +   PG  G  G +GE G  G  G+ GERG    GAPGV       
Sbjct: 277 LPGISLPGPRGSQGQAGKPGAAGKDGGQGEKGEVGSPGIPGERGAPGSGAPGVQGLKGIW 336

Query: 145 -------------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
                        +G PG QG+ G  G    KGD G  G +G  GD+G  GP+G +G  G
Sbjct: 337 CRIWILSWFHCMCLGEPGVQGLVGAAGS---KGDRGTTGEKGSKGDKGAVGPEGKVGERG 393

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G D   G PG  G++G  G  G  G PG+ G  G  GI G  G  GE G TGP+G +G
Sbjct: 394 MKG-DTGAGKPGVQGIEGNKGEKGDLGPPGQ-GEQGVMGIKGELGPKGEVGETGPKGEKG 451

Query: 252 KSG 254
           + G
Sbjct: 452 ERG 454



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 88/194 (45%), Gaps = 52/194 (26%)

Query: 112 PGLQGPIGQKGEIG-----AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------ 160
           PG+QG  G KGE G      +GE GV G +GE G  G VG  GP+G  G+ G        
Sbjct: 403 PGVQGIEGNKGEKGDLGPPGQGEQGVMGIKGELGPKGEVGETGPKGEKGERGAGDPGVQG 462

Query: 161 -----------GPKGDMGY-----PGPQGIPGDEGKRGPKGDMG-----YPGRIGLDGRD 199
                      G KGD+G       G QG+ G  G  GPKG++G      PG  G  G  
Sbjct: 463 VGGVKGEKGDIGIKGDLGSGEKGEKGEQGV-GLVGPVGPKGEIGVGIGGLPGNQGEQGVQ 521

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--------------GIPGTNGTNGEK---- 241
           G+ G+ G  GI G  G  G  G DGLPG+               G+PG  G  GEK    
Sbjct: 522 GIKGQKGEVGIQGPQGFVGPRGSDGLPGEPAVVGPGFKGEPGLIGVPGAQGIKGEKGDPG 581

Query: 242 -GMTGPRGNRGKSG 254
            G+TG +G+RG  G
Sbjct: 582 IGLTGQKGDRGAIG 595



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 67/122 (54%), Gaps = 17/122 (13%)

Query: 113 GLQGPIGQKGEIGA--------KGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEG 158
           GL GP+G KGEIG         +GE GV+G +G+KG  G+      VGP G  G+PG+  
Sbjct: 493 GLVGPVGPKGEIGVGIGGLPGNQGEQGVQGIKGQKGEVGIQGPQGFVGPRGSDGLPGEPA 552

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGD--MGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             GP G  G PG  G+PG +G +G KGD  +G  G+ G  G  G PG+ G  G  GR G 
Sbjct: 553 VVGP-GFKGEPGLIGVPGAQGIKGEKGDPGIGLTGQKGDRGAIGSPGKTGPTGGLGRTGP 611

Query: 217 DG 218
            G
Sbjct: 612 KG 613


>gi|432934243|ref|XP_004081925.1| PREDICTED: collagen alpha-2(VI) chain-like [Oryzias latipes]
          Length = 984

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 91/180 (50%), Gaps = 27/180 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEG---------- 158
           PG  G  GQKG +G  G  G KG+    G +G  G  G  GPQG  G++G          
Sbjct: 299 PGKNGVHGQKGTMGRIGAPGCKGDPGNEGPEGYQGEAGETGPQGSNGEKGGPGLPGKPGP 358

Query: 159 -----KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE--------- 204
                ++GPKG++G PG  G+PG++G +G +GD G PG  G  G+ G  GE         
Sbjct: 359 WGPDGEQGPKGEIGIPGNPGVPGNKGLKGRRGDRGPPGAKGAVGKKGEKGEQGPEGERGR 418

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PG DG  G  G  G+PG  G  G+ G PG NG  G+ G  GPRGN G+ G  G  G P  
Sbjct: 419 PGEDGFKGSKGEQGLPGPRGQAGETGDPGKNGVVGDPGYPGPRGNPGRRGPRGDKGRPGF 478



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 91/204 (44%), Gaps = 49/204 (24%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGP 171
           QGP   KGEIG  G  GV G +G KG  G  GPPG +G     G++G++GP+G+ G PG 
Sbjct: 365 QGP---KGEIGIPGNPGVPGNKGLKGRRGDRGPPGAKGAVGKKGEKGEQGPEGERGRPGE 421

Query: 172 QGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL--P 226
            G  G +G++   GP+G  G  G  G +G  G PG PG  G PGR G  G  G+ G   P
Sbjct: 422 DGFKGSKGEQGLPGPRGQAGETGDPGKNGVVGDPGYPGPRGNPGRRGPRGDKGRPGFSYP 481

Query: 227 GKDGIPGTNGTN---------------------------------GEKGMTGPRGNRGKS 253
           G  G PG  G                                   GE G  GPRGN G  
Sbjct: 482 GPRGPPGERGEPGRRGPRGSRGECGAKGEAGNKGPPGTPGEPGQLGEPGQRGPRGNPGAD 541

Query: 254 GINGVPGTPA-----ICAYKRESC 272
           G  G  G P      +  Y RE+C
Sbjct: 542 GSPGPTGDPGLTECDVMTYIRETC 565



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 86/186 (46%), Gaps = 57/186 (30%)

Query: 112 PGLQGPIGQ---KGEIGAKGEM---------------GVKGERGEKGAPGVVGPPGPQGI 153
           PG++G IG+   KGE+G KG+                G  G  G+KG  G +G PG +G 
Sbjct: 263 PGIEGQIGRLGPKGEVGFKGDKGEVGVGGAKGVAGVPGKNGVHGQKGTMGRIGAPGCKGD 322

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGLDGR 198
           PG+EG  G +G+ G  GPQG  G++G               ++GPKG++G PG       
Sbjct: 323 PGNEGPEGYQGEAGETGPQGSNGEKGGPGLPGKPGPWGPDGEQGPKGEIGIPGN------ 376

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSGI 255
              PG PG  G+ GR G              G PG  G     GEKG  GP G RG+ G 
Sbjct: 377 ---PGVPGNKGLKGRRG------------DRGPPGAKGAVGKKGEKGEQGPEGERGRPGE 421

Query: 256 NGVPGT 261
           +G  G+
Sbjct: 422 DGFKGS 427



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 75/158 (47%), Gaps = 41/158 (25%)

Query: 111 PPGLQGPIGQKGEIG------------------AKGEMGVKGERGEKGAP------GVVG 146
           PPG +G +G+KGE G                  +KGE G+ G RG+ G        GVVG
Sbjct: 394 PPGAKGAVGKKGEKGEQGPEGERGRPGEDGFKGSKGEQGLPGPRGQAGETGDPGKNGVVG 453

Query: 147 PPGPQGIPGDEGKRGPKGDMG-----YPGPQGIPGDEGKR------------GPKGDMGY 189
            PG  G  G+ G+RGP+GD G     YPGP+G PG+ G+             G KG+ G 
Sbjct: 454 DPGYPGPRGNPGRRGPRGDKGRPGFSYPGPRGPPGERGEPGRRGPRGSRGECGAKGEAGN 513

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            G  G  G  G  GEPG  G  G  G DG PG  G PG
Sbjct: 514 KGPPGTPGEPGQLGEPGQRGPRGNPGADGSPGPTGDPG 551



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 60/108 (55%), Gaps = 9/108 (8%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           QG  G  G+ GPKG  G  G  GI G  G+ GPKG++G+ G     G  G+ G  G+ G+
Sbjct: 242 QGAKGARGQTGPKGRKGAQGDPGIEGQIGRLGPKGEVGFKGD---KGEVGVGGAKGVAGV 298

Query: 211 PGRNGM---DGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGK 252
           PG+NG+    G  G+ G PG  G PG  G     GE G TGP+G+ G+
Sbjct: 299 PGKNGVHGQKGTMGRIGAPGCKGDPGNEGPEGYQGEAGETGPQGSNGE 346


>gi|332243962|ref|XP_003271139.1| PREDICTED: collagen alpha-1(IX) chain isoform 2 [Nomascus
           leucogenys]
          Length = 921

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 106/189 (56%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+R      GPKGD G  G +GIPG     GPKGD G P 
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGFP---GPKGDTGLP- 540

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G+DGRDG+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G
Sbjct: 541 --GMDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 599 QMGNSGKPG 607



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA G+ G P            GPKGD G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGFP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGMDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 599 QMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPG 640



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 73/140 (52%), Gaps = 6/140 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 185 GDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GD G  G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGFPGPKGDT 537

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G+    G  G+ GI G+PGT
Sbjct: 538 GLP---GMDGRDGIPGMPGT 554



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGFPG 532



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 88/193 (45%), Gaps = 48/193 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GP+
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPR 621

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PG+                   G+ G  G+ GEPG  G  G +
Sbjct: 622 GLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 681

Query: 215 GMD------------GIPGKDGLPGKDGIPGTNGTNGEKGM------------TGPRGNR 250
           G +            G+PG  G  G  G PG  G  G +G+             G +G +
Sbjct: 682 GEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQ 741

Query: 251 GKSGINGVPGTPA 263
           G +G+ GV G P 
Sbjct: 742 GATGLPGVQGPPG 754



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 76/179 (42%), Gaps = 60/179 (33%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   +MG  G+ G++G PG VGP GP+G+PG  G+ GP G  G 
Sbjct: 579 PGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGL 638

Query: 169 PGP------------------------QGIPGDEGKRGPKG---------------DMGY 189
           PG                         +G+ G+ G +G +G               D+G 
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGL 698

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
           P   G  G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 P---GPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 90/229 (39%), Gaps = 78/229 (34%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE------------------- 138
            + G      +  PPG  GP G +G  GA+G  G  G +G+                   
Sbjct: 496 GLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGFPGPKGDTGLPGMDGRDGIPGMPGTK 555

Query: 139 --------------KGAPGVVGPPGPQGIPGDEG------KRGPKGDMGYPGPQGIPGDE 178
                         +G PGV G PG +G+ G++G      K G  G+ G PG QG PG+ 
Sbjct: 556 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEV 615

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEP------------------------GLDGIPGRN 214
           G RGP+G  G  G +G  G  GLPG+                         G+ G PG  
Sbjct: 616 GPRGPRGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPK 675

Query: 215 GMDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           G  G  G++            GLPG     G+ G  GE G+ GP G+RG
Sbjct: 676 GEQGASGEEGEAGERGELGDIGLPGPK---GSAGNPGEPGLRGPEGSRG 721



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 38/69 (55%), Gaps = 7/69 (10%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIP-----GRNGM 216
           G  G PG +G PG  G RGPKGD+G  G  G  GR   GLPG  GL G P     GRNG 
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAIGLPGDPGPASYGRNGR 873

Query: 217 DGIPGKDGL 225
           DG  G  G+
Sbjct: 874 DGERGPPGV 882


>gi|348586279|ref|XP_003478896.1| PREDICTED: collagen alpha-1(XXVII) chain-like isoform 1 [Cavia
            porcellus]
          Length = 1858

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 107/228 (46%), Gaps = 38/228 (16%)

Query: 88   LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA-------------------KG 128
            + A     L    G         PPGL+G  G++GE G                    +G
Sbjct: 1297 MGAQGEPGLAGYDGHKGIAGPLGPPGLKGEKGEQGEDGKAEGPPGPPGDRGPMGDRGDRG 1356

Query: 129  EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
            E G  G RG++G  G+ G PG QG+PG  G RG       PGP+G  G+EG +G  G  G
Sbjct: 1357 EPGDPGYRGQEGVQGLRGKPGQQGLPGHPGPRG------QPGPKGSKGEEGPKGKPGKAG 1410

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTG 245
             PGR G+ G  GLPG     G+ GR G +G  G DGLPG+DG  G  G    +G+ G  G
Sbjct: 1411 APGRRGIQGLQGLPGP---RGVVGRQGPEGTAGLDGLPGRDGRAGQQGEQGDDGDPGPVG 1467

Query: 246  PRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
            P G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 1468 PAGRRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1508



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 104/211 (49%), Gaps = 17/211 (8%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP GQ G  G+KGE G KG+ G+ GAPG  G  G QG+PG  
Sbjct: 1368 GVQGLRGKPGQQGLPGHPGPRGQPGPKGSKGEEGPKGKPGKAGAPGRRGIQGLQGLPGPR 1427

Query: 158  ---GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIP 211
               G++GP+G  G  G  G  G  G++G +GD G PG +G  GR G PG    PG  G P
Sbjct: 1428 GVVGRQGPEGTAGLDGLPGRDGRAGQQGEQGDDGDPGPVGPAGRRGNPGVAGLPGAQGPP 1487

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  G  G+PG+ G PGK G  G  G  G +G  G +G  G SG  G PG   +   K   
Sbjct: 1488 GFKGESGLPGQLGPPGKRGTEGGMGLPGSQGEPGSKGQPGDSGEMGFPGVAGLFGPKG-- 1545

Query: 272  CSLLPNSETSQLLI-----PPTIVGSEHIFS 297
                P  +T    I     PP ++G E I  
Sbjct: 1546 ----PPGDTGFKGIQGPRGPPGLMGKEGIIG 1572



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 82/150 (54%), Gaps = 12/150 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEGK 159
            PG  G  GQ+GE G  G+ G  G  G +G PGV G PG QG PG              GK
Sbjct: 1445 PGRDGRAGQQGEQGDDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGK 1504

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            RG +G MG PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+
Sbjct: 1505 RGTEGGMGLPGSQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDTGFKGIQGPRGPPGL 1564

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             GK+G+ G  G  G +G  G KG  G RG+
Sbjct: 1565 MGKEGIIGPLGSQGPSGLPGRKGDKGSRGD 1594



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 78/145 (53%), Gaps = 12/145 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG++G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++
Sbjct: 671 GQKGDLGLSPGQAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQ 721

Query: 179 GKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+ GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  
Sbjct: 722 GQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGIPGLFGLPGSDGERGLPGVPGKR 781

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  G RG  G++G PG
Sbjct: 782 GKMGRPGFPGDFGERGPPGLDGNPG 806



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 92/182 (50%), Gaps = 24/182 (13%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KG +G  GE G+KG++GE+G PGV G PG QG  G +G  G  G  G PG
Sbjct: 828  PLGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGEPGFQGDKGSQGLPGVPGARGKPG 887

Query: 171  PQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------ 215
            P G  GD+G           G  GD+G PG  G +G  G PG  GL G  G+ G      
Sbjct: 888  PTGRVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGTKGKPGARGLPGPRGQLGPEGDEG 947

Query: 216  ---------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                     ++G+PG+ G PG+ G  G+ G  GE G  GP G +G  G  G+ G P I  
Sbjct: 948  PMGPPGAPGVEGLPGRKGFPGRPGPDGSKGEPGEPGRPGPMGEQGLMGFIGLVGEPGIVG 1007

Query: 267  YK 268
             K
Sbjct: 1008 EK 1009



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 88/170 (51%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 700 PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGI 759

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMD----- 217
           PG  G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG  G+      
Sbjct: 760 PGLFGLPGSDGER---GLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGDLGLPGPPGV 816

Query: 218 -------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                  G  G  G PG  G+ G  G  GE G+ G +G +G  G++G PG
Sbjct: 817 PGLLGDMGALGPLGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGEPG 866



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 84/187 (44%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKG-------- 164
           GP G +G IG  G  G+ G  GE+G PGV G  G     G PGD G+RGP G        
Sbjct: 749 GPKGSRGYIGIPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGDL 808

Query: 165 -------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                        DMG  GP G PG +G +G  G +G PG  G  G  G+P   GEPG  
Sbjct: 809 GLPGPPGVPGLLGDMGALGPLGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGEPGFQ 868

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---------------GEKGMTGPRGNRGKS 253
           G  G  G+ G+PG  G PG  G  G  G+                G  G  GP G +GK 
Sbjct: 869 GDKGSQGLPGVPGARGKPGPTGRVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGTKGKP 928

Query: 254 GINGVPG 260
           G  G+PG
Sbjct: 929 GARGLPG 935



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 87/186 (46%), Gaps = 36/186 (19%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDMGYPGP 171
            +G KG  GA GE G+ GE G KG  G      P G PG++      G+ G +GD G  GP
Sbjct: 1144 MGPKGPPGAVGEPGIPGEAGMKGDLG------PLGAPGEQGLIGQRGEPGLEGDSGPVGP 1197

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+ GD G  GP G+ G  G+ GL G DGLPG PG+ GI    G +G PGK G  G+ G 
Sbjct: 1198 DGLKGDRGDPGPDGERGEKGQEGLKGEDGLPGPPGITGI---RGPEGKPGKQGEKGRTGA 1254

Query: 232  PGTNGTNGE---------------------KGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G+ G  G+                     +G  GP G  G+ G  G PG      +K  
Sbjct: 1255 KGSKGYPGQLGEMGVPGDSGPPGTPGPKGSRGSLGPVGAPGRMGAQGEPGLAGYDGHKGI 1314

Query: 271  SCSLLP 276
            +  L P
Sbjct: 1315 AGPLGP 1320



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 80/181 (44%), Gaps = 39/181 (21%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------ 162
            PG+ G  G KG++G   A GE G+ G+RGE G  G  GP GP G+ GD G  GP      
Sbjct: 1156 PGIPGEAGMKGDLGPLGAPGEQGLIGQRGEPGLEGDSGPVGPDGLKGDRGDPGPDGERGE 1215

Query: 163  ------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------ 210
                  KG+ G PGP GI G  G  G  G  G  GR G  G  G PG+ G  G+      
Sbjct: 1216 KGQEGLKGEDGLPGPPGITGIRGPEGKPGKQGEKGRTGAKGSKGYPGQLGEMGVPGDSGP 1275

Query: 211  ------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                              PGR G  G PG  G  G  GI G  G  G KG  G +G  GK
Sbjct: 1276 PGTPGPKGSRGSLGPVGAPGRMGAQGEPGLAGYDGHKGIAGPLGPPGLKGEKGEQGEDGK 1335

Query: 253  S 253
            +
Sbjct: 1336 A 1336



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 87/188 (46%), Gaps = 51/188 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGK 159
           PG  G  G++G+ G +G  G KG  G +G PG VG PGP+G            +PG +G+
Sbjct: 712 PGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGIPGLFGLPGSDGE 771

Query: 160 RG------PKGDMGYPGPQGIPGDEGKRGPK---------------------------GD 186
           RG       +G MG PG    PGD G+RGP                            G 
Sbjct: 772 RGLPGVPGKRGKMGRPG---FPGDFGERGPPGLDGNPGDLGLPGPPGVPGLLGDMGALGP 828

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGM 243
           +GYPG  G+ G  G  GEPGL G  G  G+ G+   PG  G  G  G+PG  G  G+ G 
Sbjct: 829 LGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGEPGFQGDKGSQGLPGVPGARGKPGP 888

Query: 244 TGPRGNRG 251
           TG  G++G
Sbjct: 889 TGRVGDKG 896



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 94/204 (46%), Gaps = 52/204 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEM------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PG QG IGQ+GE G +G+       G+KG+RG+ G  G  G  G +G+ G++G  GP G 
Sbjct: 1174 PGEQGLIGQRGEPGLEGDSGPVGPDGLKGDRGDPGPDGERGEKGQEGLKGEDGLPGPPGI 1233

Query: 166  MGYPGPQGIPGDEGKR---GPKGDMGYPGR---------------------------IGL 195
             G  GP+G PG +G++   G KG  GYPG+                           +G 
Sbjct: 1234 TGIRGPEGKPGKQGEKGRTGAKGSKGYPGQLGEMGVPGDSGPPGTPGPKGSRGSLGPVGA 1293

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT----------------NG 239
             GR G  GEPGL G  G  G+ G  G  GL G+ G  G +G                  G
Sbjct: 1294 PGRMGAQGEPGLAGYDGHKGIAGPLGPPGLKGEKGEQGEDGKAEGPPGPPGDRGPMGDRG 1353

Query: 240  EKGMTGPRGNRGKSGINGVPGTPA 263
            ++G  G  G RG+ G+ G+ G P 
Sbjct: 1354 DRGEPGDPGYRGQEGVQGLRGKPG 1377



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 94/216 (43%), Gaps = 43/216 (19%)

Query: 88   LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
            L A     L+  +G      +  P G  G  G +G+ G  GE G KG+ G KG  G+ GP
Sbjct: 1171 LGAPGEQGLIGQRGEPGLEGDSGPVGPDGLKGDRGDPGPDGERGEKGQEGLKGEDGLPGP 1230

Query: 148  PGPQGIPGDE---GKRGPKGDMGYPGPQGIPGDEGK------------------RGPKGD 186
            PG  GI G E   GK+G KG  G  G +G PG  G+                  RG  G 
Sbjct: 1231 PGITGIRGPEGKPGKQGEKGRTGAKGSKGYPGQLGEMGVPGDSGPPGTPGPKGSRGSLGP 1290

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI--------------- 231
            +G PGR+G  G  GL G  G  GI G  G  G+ G+ G  G+DG                
Sbjct: 1291 VGAPGRMGAQGEPGLAGYDGHKGIAGPLGPPGLKGEKGEQGEDGKAEGPPGPPGDRGPMG 1350

Query: 232  -------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   PG  G  G++G+ G RG  G+ G+ G PG
Sbjct: 1351 DRGDRGEPGDPGYRGQEGVQGLRGKPGQQGLPGHPG 1386



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 85/205 (41%), Gaps = 63/205 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GP+G  G  G++G +G+ G         ERG  G PG  G  G  G PGD G+RGP 
Sbjct: 740 GLPGPVGDPGPKGSRGYIGIPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPP 799

Query: 164 G---------------------------DMGYPGPQG------------IPGDEGKRGPK 184
           G                            +GYPGP+G            + GD+G++G  
Sbjct: 800 GLDGNPGDLGLPGPPGVPGLLGDMGALGPLGYPGPKGMKGLMGGVGEPGLKGDKGEQGVP 859

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---------------DGLPGKD 229
           G  G PG  G  G  GLPG PG  G PG  G  G  G                 G PG +
Sbjct: 860 GVSGEPGFQGDKGSQGLPGVPGARGKPGPTGRVGDKGSLGFPGPPGPEGFPGDIGPPGDN 919

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  GT G  G +G+ GPRG  G  G
Sbjct: 920 GPEGTKGKPGARGLPGPRGQLGPEG 944



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 87/189 (46%), Gaps = 48/189 (25%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------- 144
             M+G      E   PGL+G  G++G  G  GE G +G++G +G PGV             
Sbjct: 836  GMKGLMGGVGE---PGLKGDKGEQGVPGVSGEPGFQGDKGSQGLPGVPGARGKPGPTGRV 892

Query: 145  --------------------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
                                +GPP         G  GP+G  G PG +G+PG  G+ GP+
Sbjct: 893  GDKGSLGFPGPPGPEGFPGDIGPP---------GDNGPEGTKGKPGARGLPGPRGQLGPE 943

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEK 241
            GD G  G  G  G +GLPG  G  G PG +G  G PG+ G P   G+ G+ G  G  GE 
Sbjct: 944  GDEGPMGPPGAPGVEGLPGRKGFPGRPGPDGSKGEPGEPGRPGPMGEQGLMGFIGLVGEP 1003

Query: 242  GMTGPRGNR 250
            G+ G +G+R
Sbjct: 1004 GIVGEKGDR 1012



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            +  PPG +G  G  G  G++GE G KG+    GE G PGV G  GP+G PGD G +G +G
Sbjct: 1498 QLGPPGKRGTEGGMGLPGSQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDTGFKGIQG 1557

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
              G PG  G  G  G  G +G  G PGR G  G  G
Sbjct: 1558 PRGPPGLMGKEGIIGPLGSQGPSGLPGRKGDKGSRG 1593


>gi|73486666|ref|NP_001842.3| collagen alpha-1(IX) chain isoform 1 precursor [Homo sapiens]
 gi|296439373|sp|P20849.3|CO9A1_HUMAN RecName: Full=Collagen alpha-1(IX) chain; Flags: Precursor
 gi|119569208|gb|EAW48823.1| collagen, type IX, alpha 1, isoform CRA_b [Homo sapiens]
          Length = 921

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 106/189 (56%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGI---PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+   PGD+G+R      GPKGD G  G +GIPG     GPKGD G P 
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP---GPKGDTGLP- 540

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G+DGRDG+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G
Sbjct: 541 --GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 599 QMGNSGKPG 607



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA G+ G P            GPKGD G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GP+   G+RG+ G  G PG P 
Sbjct: 599 QMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 640



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 73/140 (52%), Gaps = 6/140 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 185 GDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GD G  G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDT 537

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G+    G  G+ GI G+PGT
Sbjct: 538 GLP---GVDGRDGIPGMPGT 554



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 532



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G +G  GA+G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 496 GLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 555

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG  G PG+ G  G  G PG+ G  G  
Sbjct: 556 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEV 615

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G  G+PG  G  G  G PG  G
Sbjct: 616 GPRGPQGLPGSRGELGPVGSPGLPG 640



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 88/193 (45%), Gaps = 48/193 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GPQ
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 621

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PG+                   G+ G  G+ GEPG  G  G +
Sbjct: 622 GLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 681

Query: 215 GMD------------GIPGKDGLPGKDGIPGTNGTNGEKGM------------TGPRGNR 250
           G +            G+PG  G  G  G PG  G  G +G+             G +G +
Sbjct: 682 GEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQ 741

Query: 251 GKSGINGVPGTPA 263
           G +G+ GV G P 
Sbjct: 742 GATGLPGVQGPPG 754



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 76/179 (42%), Gaps = 60/179 (33%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   +MG  G+ G++G PG VGP GPQG+PG  G+ GP G  G 
Sbjct: 579 PGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGL 638

Query: 169 PGP------------------------QGIPGDEGKRGPKG---------------DMGY 189
           PG                         +G+ G+ G +G +G               D+G 
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGL 698

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
           P   G  G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 P---GPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 84/197 (42%), Gaps = 60/197 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGPQGIPGD 156
           PGL GP G  G  G  G  G+ G               + G +G PGV G PG +G+ G+
Sbjct: 528 PGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGE 587

Query: 157 EG------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP----- 205
           +G      K G  G+ G PG QG PG+ G RGP+G  G  G +G  G  GLPG+      
Sbjct: 588 KGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGS 647

Query: 206 -------------------GLDGIPGRNGMDGIPGKD------------GLPGKDGIPGT 234
                              G+ G PG  G  G  G++            GLPG     G+
Sbjct: 648 PGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPK---GS 704

Query: 235 NGTNGEKGMTGPRGNRG 251
            G  GE G+ GP G+RG
Sbjct: 705 AGNPGEPGLRGPEGSRG 721



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 39/69 (56%), Gaps = 7/69 (10%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--DGLPGEPGLDGIP-----GRNGM 216
           G  G PG +G PG  G RGPKGD+G  G  G  GR  +GLPG  GL G P     GRNG 
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGR 873

Query: 217 DGIPGKDGL 225
           DG  G  G+
Sbjct: 874 DGERGPPGV 882


>gi|82569439|gb|ABB83364.1| fibrillar collagen [Saccoglossus kowalevskii]
          Length = 454

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 85/145 (58%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G +G  G+KG+RG  G+PG  G  GP G PG  G+ GP+G  G PGP G  G E
Sbjct: 4   GKDGIPGVQGRPGIKGDRGNTGSPGPAGMSGPMGAPGPSGEAGPQGPTGDPGPSGPVGPE 63

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G RG +G  G PG  G  G  G+ G  G  G  G  G+ GIPG  G+PG+DG+ G  G N
Sbjct: 64  GARGSRGPSGEPGIAGAPGDAGIQGARGAKGHRGFPGLQGIPGSMGVPGEDGMTGPPGPN 123

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPA 263
           G +G TGPRG+ G +G +G  G P 
Sbjct: 124 GPRGATGPRGSPGLNGKDGPMGQPG 148



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/147 (46%), Positives = 79/147 (53%), Gaps = 3/147 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +G  G  G  G  G MG  G  GE G  G  G PGP G  G EG RG +G  G PG  
Sbjct: 19  GDRGNTGSPGPAGMSGPMGAPGPSGEAGPQGPTGDPGPSGPVGPEGARGSRGPSGEPGIA 78

Query: 173 GIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PGD   +G RG KG  G+PG  G+ G  G+PGE G+ G PG NG  G  G  G PG +
Sbjct: 79  GAPGDAGIQGARGAKGHRGFPGLQGIPGSMGVPGEDGMTGPPGPNGPRGATGPRGSPGLN 138

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G  G  G +G  G RG+RG SG +
Sbjct: 139 GKDGPMGQPGPEGPRGSRGDRGDSGTS 165


>gi|426330229|ref|XP_004026124.1| PREDICTED: collagen alpha-1(XXIV) chain-like, partial [Gorilla
            gorilla gorilla]
          Length = 1440

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 95/167 (56%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG   P G  GIPG 
Sbjct: 1212 VGVPGLRGATGQQGPPGEPG---DQGEQGLKGERGSEGNKGKKGAPG---PSGKPGIPGL 1265

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G  GPKG  GY G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+
Sbjct: 1266 QGLLGPKGIQGYHGADGISGNPGKVGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGL 1325

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G PG  G  G+ G+PG  G  G++G  G +G++G  G  G+ G P 
Sbjct: 1326 PGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGEPGLKGQPG 1372



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 104/185 (56%), Gaps = 15/185 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGP---QGIPGDEGKRGPK 163
            G+QG  G+KG+ G +G  G+       GERG +G PG+ G PG    +G+PG+ G RG +
Sbjct: 939  GIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQ 998

Query: 164  GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GD+G PG  G+   PG EG+ G +G+ G  G +G  G  G  GEPGL G PG  G +G+ 
Sbjct: 999  GDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGPAGSVGGTGEPGLRGEPGAPGEEGLQ 1058

Query: 221  GKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
            GKDGL   PG  G+PG +G  GE G+ G  G  G+SG  G+PG         E  S  P 
Sbjct: 1059 GKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGDKGQIGPTGEVGSRGPP 1118

Query: 278  SETSQ 282
             +T +
Sbjct: 1119 GKTGK 1123



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/189 (41%), Positives = 99/189 (52%), Gaps = 16/189 (8%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGA----------KGEMGVKGERGEKGAPGVVGP 147
             + G+     +  P GL GP G+KG  G           +GE G  GE+GE+G PG  G 
Sbjct: 1149 GIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGLPGPRGEPGPVGEQGERGEPGAEGY 1208

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             G  G+PG  G  G +G  G PG QG  G +G+RG +G+ G  G  G  G+ G+PG  GL
Sbjct: 1209 KGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGL 1268

Query: 208  ---DGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                GI G +G DGI   PGK G PGK G+PG  G  G  G+ G  G  G  G +G+PG+
Sbjct: 1269 LGPKGIQGYHGADGISGNPGKVGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGS 1328

Query: 262  PAICAYKRE 270
            P I   K E
Sbjct: 1329 PGIQGPKGE 1337



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/195 (40%), Positives = 102/195 (52%), Gaps = 21/195 (10%)

Query: 96   LVAMQGFCNSTKEYC---PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L  +QG      E     PPG +G  G +GE GAKG++G  G  G  G PG+ G PG   
Sbjct: 994  LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGPAGSVGGTGEPGLRGEPG--- 1050

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDG 209
             PG+EG +G  G  G PG +G+PG++G+   KG+MG PG IG  GR    GLPG+ G  G
Sbjct: 1051 APGEEGLQGKDGLKGVPGGRGLPGEDGE---KGEMGLPGIIGPLGRSGQTGLPGDKGQIG 1107

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPG 260
              G  G  G PGK G  G  G  GT G  G  G+ GP         RG++G+ G +G+PG
Sbjct: 1108 PTGEVGSRGPPGKTGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPG 1167

Query: 261  TPAICAYKRESCSLL 275
                  Y  E  ++L
Sbjct: 1168 PKGEKGYPGEDSTVL 1182



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 96/196 (48%), Gaps = 42/196 (21%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGE------------MGVKGERGEKGAPGVVGPPGPQGI-- 153
            E  P GL+G +G +G IG  GE             G  GE+GE+G+PG +GP G +G+  
Sbjct: 832  EPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMG 891

Query: 154  ----------------PGDEGKR------GPKGDMGYPGPQGIPGD---EGKRGPKGDMG 188
                            PG  G R      GPKG  G  GP G+ G+   +G +G KGD G
Sbjct: 892  YPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQG 951

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTG 245
              G  GL G+ G PGE G  G PG  G+ G  G  GLPG+ G+ G     G  GE GM G
Sbjct: 952  KRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEG 1011

Query: 246  PRGNRGKSGINGVPGT 261
            P G  G+SG+ G PG 
Sbjct: 1012 PPGTEGESGLQGEPGA 1027



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 92/168 (54%), Gaps = 15/168 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKGDMGY 168
            PGLQG  G  G+ G  GE G++G +G+ G PG +G   PPG +G  G +G+ G KGD+G 
Sbjct: 974  PGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVG- 1032

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGK 222
              P G  G  G+ G +G+ G PG  GL G+DGL G PG  G+PG +      G+ GI G 
Sbjct: 1033 --PAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGP 1090

Query: 223  DGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             G  G+ G+PG  G     GE G  GP G  GKSG  G  GT     +
Sbjct: 1091 LGRSGQTGLPGDKGQIGPTGEVGSRGPPGKTGKSGPKGARGTRGAVGH 1138



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 100/241 (41%), Gaps = 63/241 (26%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            V  QG      E  P GL G +G  G IG KGE G  G  G +G  GV+           
Sbjct: 842  VGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGP 901

Query: 146  -------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG---DEGKRGPKG---- 185
                         GPPG QG  G  G RGP G +G  G QG  G   D+GKRGP G    
Sbjct: 902  IGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGK 961

Query: 186  -----DMGYPGRIGLDGRDG------LPGEPGLDGI------PGRNGMDGIPGKDGLPGK 228
                 + G+ G+ GL G  G      LPGEPGL G+      PG  GM+G PG +G  G 
Sbjct: 962  TGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGL 1021

Query: 229  DGIPGTN---------------GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
             G PG                 G  GE G  G  G +GK G+ GVPG   +     E   
Sbjct: 1022 QGEPGAKGDVGPAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGE 1081

Query: 274  L 274
            +
Sbjct: 1082 M 1082



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 82/166 (49%), Gaps = 22/166 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
            GLQG  G KG  G +G  G  GE+GE G PG++GP    G  G+PGD+G+ GP G++G  
Sbjct: 1056 GLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGDKGQIGPTGEVGSR 1115

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP G  G  G +G +G  G  G +GL G DG PG PG  G              G PG  
Sbjct: 1116 GPPGKTGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRG------------HQGQPGPS 1163

Query: 230  GIPGTNGTNGEK-------GMTGPRGNRGKSGINGVPGTPAICAYK 268
            G+PG  G  G         G+ GPRG  G  G  G  G P    YK
Sbjct: 1164 GLPGPKGEKGYPGEDSTVLGLPGPRGEPGPVGEQGERGEPGAEGYK 1209



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/152 (44%), Positives = 85/152 (55%), Gaps = 12/152 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G      V GE+G++G  G++GPPG QG   ++G +G  G  G PG 
Sbjct: 527 PGLPGPKGPKGDPGFSPGQAVPGEKGDQGLSGLMGPPGMQG---NKGLKGHPGLPGLPGE 583

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---PGRNGMDGIPGKDGLPGK 228
           QGIPG  G     G  GYPGR GL G +G PG  G  G    PG  G  G  G+ G+P  
Sbjct: 584 QGIPGFAGN---IGSPGYPGRQGLAGPEGNPGPKGARGFIGSPGEVGQLGPEGERGIP-- 638

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GI G  G  G +G  G  G+RG +G++G PG
Sbjct: 639 -GIRGKKGFKGRQGFPGDFGDRGPAGLDGSPG 669



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 103/219 (47%), Gaps = 57/219 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGD- 165
            G  GP G +G  GA G +G+ G  GE G PG          PGP G+PG +G++G  G+ 
Sbjct: 1122 GKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQ---PGPSGLPGPKGEKGYPGED 1178

Query: 166  ---MGYPGPQGIP---GDEGKRGP------KGDMGYPGRIGLDGRDGLPGEP-------- 205
               +G PGP+G P   G++G+RG       KG +G PG  G  G+ G PGEP        
Sbjct: 1179 STVLGLPGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGL 1238

Query: 206  ----------GLDGIPGRNGMDGIPGKDGLPGKDGI------------PGTNGTNGEKGM 243
                      G  G PG +G  GIPG  GL G  GI            PG  G  G++G+
Sbjct: 1239 KGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKVGPPGKQGL 1298

Query: 244  TGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
             G RG  G++G+ G PG P +     +  S LP S   Q
Sbjct: 1299 PGIRGGPGRTGLAGAPGPPGV-----KGSSGLPGSPGIQ 1332



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 73/135 (54%), Gaps = 15/135 (11%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP---G 191
           +RG +G PG  G PG   +PG  G +GPKGD G+   Q +PG++G +G  G MG P   G
Sbjct: 511 KRGPRGIPGPHGNPG---LPGLPGPKGPKGDPGFSPGQAVPGEKGDQGLSGLMGPPGMQG 567

Query: 192 RIGLDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTN------GEKG 242
             GL G  GLPG PG  GIPG     G  G PG+ GL G +G PG  G        GE G
Sbjct: 568 NKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGARGFIGSPGEVG 627

Query: 243 MTGPRGNRGKSGING 257
             GP G RG  GI G
Sbjct: 628 QLGPEGERGIPGIRG 642



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 90/191 (47%), Gaps = 42/191 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGDM 166
           GL GP G +G  G KG  G+ G  GE+G PG  G       PG QG+ G EG  GPKG  
Sbjct: 558 GLMGPPGMQGNKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAR 617

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGE------PGLDGIPG----- 212
           G+    G PG+ G+ GP+G+ G P   G+ G  GR G PG+       GLDG PG     
Sbjct: 618 GF---IGSPGEVGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGT 674

Query: 213 --------RN--------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKS 253
                   R         G  GIPG  GL G  G+PG  G  GE+G  G  G     G  
Sbjct: 675 GPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDK 734

Query: 254 GINGVPGTPAI 264
           G  G+PG P +
Sbjct: 735 GAVGLPGPPGM 745



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 88/181 (48%), Gaps = 24/181 (13%)

Query: 112  PGLQGPIGQKG---------------EIGAKGEMGVKGERGEKGAPGVVGPPGP------ 150
            PGLQG +G KG               ++G  G+ G+ G RG  G  G+ G PGP      
Sbjct: 1263 PGLQGLLGPKGIQGYHGADGISGNPGKVGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGS 1322

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G+PG  G +GPKG+ G PG  GI G  G RG +GD G  G  GL G+   PGE G+ G+
Sbjct: 1323 SGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGEPGLKGQ---PGEYGVQGL 1379

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G  G  G  G +G  G  GI G  G  G +G TGP G  G  G  G  G      ++ E
Sbjct: 1380 TGFQGFPGPKGPEGDAGIVGISGPKGPVGHRGNTGPLGREGIIGPTGRTGPRGEKGFRGE 1439

Query: 271  S 271
            +
Sbjct: 1440 T 1440



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 88/192 (45%), Gaps = 27/192 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   QG       +   G +G  GQKG  G  G  G+KGE G++G  G +G  GP G+PG
Sbjct: 802 LKGTQGEEGPIGPFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPG 861

Query: 156 D---EGKRGPKGDMGYPGPQG------------------------IPGDEGKRGPKGDMG 188
           +    G  G KG+ G PGP G                        +PG  G RGP G  G
Sbjct: 862 EVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQG 921

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+ G  G DGL GE G+ G  G  G  G  G  GL GK G PG  G  G+ G+ G  G
Sbjct: 922 PKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPG 981

Query: 249 NRGKSGINGVPG 260
           + G  G+ G PG
Sbjct: 982 STGDRGLPGEPG 993



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 88/202 (43%), Gaps = 51/202 (25%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           +   G+        P G  GP G +G IG+ GE+G  G  GE+G PG+ G  G    QG 
Sbjct: 593 IGSPGYPGRQGLAGPEGNPGPKGARGFIGSPGEVGQLGPEGERGIPGIRGKKGFKGRQGF 652

Query: 154 PGDEGKRGPKGDMGYPG------------------------PQGIPG------------- 176
           PGD G RGP G  G PG                        P GIPG             
Sbjct: 653 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGI 712

Query: 177 --DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD----- 229
             D+G++G  G++G PG  G  G  GLPG PG+ G PG +G  G PG  G  G       
Sbjct: 713 KGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGQSGPPGPEGF 772

Query: 230 ----GIPGTNGTNGEKGMTGPR 247
               GIPG NG  G KG+ G R
Sbjct: 773 PGDIGIPGQNGPEGPKGLLGNR 794



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 91/184 (49%), Gaps = 39/184 (21%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IG  GE+G +G+ G+KG     G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 802 LKGTQGEEGPIGPFGELGPRGKPGQKG---YAGEPGPEGLKGEVGDQGNIGKIGETGPVG 858

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
           +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 859 LPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG 918

Query: 213 RN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGING 257
                G  G  G DGL G+ GI G  G  G++G  GP            RG +GK G+ G
Sbjct: 919 SQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQG 978

Query: 258 VPGT 261
           +PG+
Sbjct: 979 LPGS 982



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 90/209 (43%), Gaps = 51/209 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEK------------GAPGVVGPPGPQGIPGD---- 156
           GL GP G +G+ G  G+ G  G +G+             G PG  GP GP+G+ G+    
Sbjct: 738 GLPGPPGMRGKPGPSGQTGDPGLQGQSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPP 797

Query: 157 --------EGKRGPKGDMGYPGPQGIPGD---------EGKRGPKGDMGYPGRIGLDGRD 199
                   +G+ GP G  G  GP+G PG          EG +G  GD G  G+IG  G  
Sbjct: 798 GPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPV 857

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------------------PGTNGTNGEK 241
           GLPGE G+ G  G  G  G PG  G  G+ G+                  PG  G  G  
Sbjct: 858 GLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPP 917

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  GP+G RG  G +G+ G   I   K E
Sbjct: 918 GSQGPKGQRGPRGPDGLLGEQGIQGAKGE 946



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 88/182 (48%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-------------------- 152
           GL G  G KGE G  GE+G  G  G+KGA G+ GPPG +G                    
Sbjct: 708 GLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGQSGPP 767

Query: 153 ----------IPGDEGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                     IPG  G  GPKG +G    PGP G+ G +G+ GP G  G  G  G  G+ 
Sbjct: 768 GPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQK 827

Query: 200 GLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  GEPG +G+ G  G  G  GK       GLPG+ G+ G+ G  GE+G  GP G +G+ 
Sbjct: 828 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEK 887

Query: 254 GI 255
           G+
Sbjct: 888 GV 889



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 86/196 (43%), Gaps = 47/196 (23%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
           ++G         P G+ GP+G  G    KG  G+KG++GE+G  G +G PG    PGD  
Sbjct: 682 LRGSVGPVGPIGPAGIPGPMGLSGN---KGLPGIKGDKGEQGTAGELGEPG---YPGD-- 733

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG---------------RIGLDGRDGLPG 203
               KG +G PGP   PG  GK GP G  G PG                IG+ G++G  G
Sbjct: 734 ----KGAVGLPGP---PGMRGKPGPSGQTGDPGLQGQSGPPGPEGFPGDIGIPGQNGPEG 786

Query: 204 EPGLDG---------IPGRNGMDGIP-------GKDGLPGKDGIPGTNGTNGEKGMTGPR 247
             GL G         + G  G +G P       G  G PG+ G  G  G  G KG  G +
Sbjct: 787 PKGLLGNRGPPGPPGLKGTQGEEG-PIGPFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQ 845

Query: 248 GNRGKSGINGVPGTPA 263
           GN GK G  G  G P 
Sbjct: 846 GNIGKIGETGPVGLPG 861


>gi|344278762|ref|XP_003411161.1| PREDICTED: collagen alpha-1(XXIV) chain [Loxodonta africana]
          Length = 1823

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 95/178 (53%), Gaps = 19/178 (10%)

Query: 112  PGLQGPIGQKGEIGAKGE-------------MGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            PGL G  G KGE G  G+              G  G+RGE+G PG  G  G  GIPG  G
Sbjct: 1282 PGLSGLPGPKGEKGHSGDDNTVLGPPGPRGEPGPIGKRGERGDPGADGYKGHVGIPGPRG 1341

Query: 159  KRGPKGDMGYPGPQG---IPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPG 212
              G +G +G PG QG   + G+ G  GP+G  G PG  G  G  GLPG     G+ G PG
Sbjct: 1342 TTGQQGPLGEPGEQGERGLKGERGSEGPQGKKGTPGPSGKAGSPGLPGLSGPKGMQGYPG 1401

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             +G+ G PGK GLPGK G+PG  G+ G  G+ G  G +G  G +G+PG+P +   K E
Sbjct: 1402 ADGISGTPGKVGLPGKRGLPGIRGSPGTTGLAGSPGPQGAKGSSGLPGSPGVLGPKGE 1459



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/151 (46%), Positives = 85/151 (56%), Gaps = 6/151 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYP 169
            G QGP+G+ GE   +GE G+KGERG +G  G  G PGP G    PG  G  GPKG  GYP
Sbjct: 1344 GQQGPLGEPGE---QGERGLKGERGSEGPQGKKGTPGPSGKAGSPGLPGLSGPKGMQGYP 1400

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G  GI G  GK G  G  G PG  G  G  GL G PG  G  G +G+ G PG  G  G+ 
Sbjct: 1401 GADGISGTPGKVGLPGKRGLPGIRGSPGTTGLAGSPGPQGAKGSSGLPGSPGVLGPKGEQ 1460

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G  G++G  G +G++G  G  G+ G
Sbjct: 1461 GLPGQPGMQGKRGHQGAQGDQGPCGEPGLKG 1491



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 94/172 (54%), Gaps = 27/172 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +G+ G KG  G+ G +GE+G PG  G  G  G PG +G  GP+G+   PGP+
Sbjct: 662 GLMGPPGMQGDKGLKGHPGLPGLQGEQGIPGFAGNIGSPGYPGRQGLGGPEGN---PGPK 718

Query: 173 GI------PGDEGKRGPKGDMGYPG---RIGLDGRDGLPGE------PGLDGIPGRNGMD 217
           G+      PGD G  GP+G+ G PG   + GL GR G PG+       G DG PG  G  
Sbjct: 719 GVRGFIGSPGDVGPLGPEGERGIPGLRGKKGLKGRQGFPGDFGDRGPAGPDGSPGLVGSI 778

Query: 218 GIPGKDGLPGK---------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  GL G           GIPG  G +G KG+ G +G++G+ GI G PG
Sbjct: 779 GPPGFPGLRGSVGLVGPIGPSGIPGPMGLSGNKGLPGIKGDKGEQGIAGEPG 830



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 80/168 (47%), Gaps = 4/168 (2%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
               QG      E    GL+G  G +G  G KG  G  G+ G  G PG+ GP G QG PG 
Sbjct: 1343 TGQQGPLGEPGEQGERGLKGERGSEGPQGKKGTPGPSGKAGSPGLPGLSGPKGMQGYPGA 1402

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G  G  G +G PG +G+PG  G  G  G  G PG  G  G  GLPG PG+ G  G  G+
Sbjct: 1403 DGISGTPGKVGLPGKRGLPGIRGSPGTTGLAGSPGPQGAKGSSGLPGSPGVLGPKGEQGL 1462

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMT----GPRGNRGKSGINGVPG 260
             G PG  G  G  G  G  G  GE G+     G  G +G  G  G PG
Sbjct: 1463 PGQPGMQGKRGHQGAQGDQGPCGEPGLKGNLYGEHGVQGLRGFQGFPG 1510



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 82/159 (51%), Gaps = 6/159 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
           PG  G IG  G  G +G  G +G  G KG  G +G PG  G  G EG+R   G +G  G 
Sbjct: 691 PGFAGNIGSPGYPGRQGLGGPEGNPGPKGVRGFIGSPGDVGPLGPEGERGIPGLRGKKGL 750

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G QG PGD G RGP G  G PG +G  G  G PG  G  G+ G  G  GIPG  GL G 
Sbjct: 751 KGRQGFPGDFGDRGPAGPDGSPGLVGSIGPPGFPGLRGSVGLVGPIGPSGIPGPMGLSGN 810

Query: 229 DGIPGTNGTNGEKGMTGPRGNR---GKSGINGVPGTPAI 264
            G+PG  G  GE+G+ G  G     G  G  G+PG P +
Sbjct: 811 KGLPGIKGDKGEQGIAGEPGESGYPGDKGAIGLPGPPGM 849



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 84/172 (48%), Gaps = 25/172 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G +G +G  G+ G  G++GEKG  G  G  G +G PG  G+ GPKG  G    
Sbjct: 1198 PGLTGPPGPEGTVGILGQRGRPGKKGEKGQMGPTGEIGSRGAPGQIGESGPKGGRGT--- 1254

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD-------------- 217
            +G  G  G  GP G+ G PG  G  G+ GL G PG  G  G +G D              
Sbjct: 1255 RGAVGHLGLMGPNGEPGIPGYRGHQGQPGLSGLPGPKGEKGHSGDDNTVLGPPGPRGEPG 1314

Query: 218  --------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                    G PG DG  G  GIPG  GT G++G  G  G +G+ G+ G  G+
Sbjct: 1315 PIGKRGERGDPGADGYKGHVGIPGPRGTTGQQGPLGEPGEQGERGLKGERGS 1366



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 86/197 (43%), Gaps = 43/197 (21%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPGP------QG 173
            E G KGE+G  G  G  G PG+ GPPGP+G   I G  G+ G KG+ G  GP      +G
Sbjct: 1179 EDGKKGELGSPGTTGPVGRPGLTGPPGPEGTVGILGQRGRPGKKGEKGQMGPTGEIGSRG 1238

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP------- 226
             PG  G+ GPKG  G  G +G  G  G  GEP   GIPG  G  G PG  GLP       
Sbjct: 1239 APGQIGESGPKGGRGTRGAVGHLGLMGPNGEP---GIPGYRGHQGQPGLSGLPGPKGEKG 1295

Query: 227  ------------------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                                    G+ G PG +G  G  G+ GPRG  G+ G  G PG  
Sbjct: 1296 HSGDDNTVLGPPGPRGEPGPIGKRGERGDPGADGYKGHVGIPGPRGTTGQQGPLGEPGEQ 1355

Query: 263  AICAYKRESCSLLPNSE 279
                 K E  S  P  +
Sbjct: 1356 GERGLKGERGSEGPQGK 1372



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 87/204 (42%), Gaps = 39/204 (19%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L   QG       +   G  G  GQKG  G +G  G+KGE G+ G  G +G  GP G+PG
Sbjct: 906  LKGTQGEEGPVGPFGELGPSGKPGQKGYAGEQGPGGLKGEVGDPGNVGTIGETGPVGLPG 965

Query: 156  D---EGKRGPKGDMGYPGPQG------------------------IPGDEGKRGPKGDMG 188
            +    G  G KG  G PGP G                        +PG  G RGP G+ G
Sbjct: 966  EVGMTGSTGEKGQRGSPGPLGPQGQKGVMGYPGPPGIPGPMGPLGLPGHVGARGPPGNRG 1025

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG------------ 236
              GR G  G DG  GE G+ G  G  G  G  G  GL GK G PG  G            
Sbjct: 1026 PKGRRGPRGPDGFSGEQGVQGAKGEKGDQGKRGPHGLIGKTGSPGERGAQGKPGLPGPPG 1085

Query: 237  TNGEKGMTGPRGNRGKSGINGVPG 260
            + GE+G+ G  G RG  G  G PG
Sbjct: 1086 STGERGLAGEPGPRGLQGDAGPPG 1109



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 83/188 (44%), Gaps = 51/188 (27%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMG 167
           P G  GP G +G IG+ G++G  G  GE+G PG+ G  G    QG PGD G RGP G  G
Sbjct: 711 PEGNPGPKGVRGFIGSPGDVGPLGPEGERGIPGLRGKKGLKGRQGFPGDFGDRGPAGPDG 770

Query: 168 YPG------PQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPG------------EPG 206
            PG      P G PG  G  G   P G  G PG +GL G  GLPG            EPG
Sbjct: 771 SPGLVGSIGPPGFPGLRGSVGLVGPIGPSGIPGPMGLSGNKGLPGIKGDKGEQGIAGEPG 830

Query: 207 LDGIPGRNGMDGIPGKDGLPGKD---------------------------GIPGTNGTNG 239
             G PG  G  G+PG  G+ GK                            GIPG NG  G
Sbjct: 831 ESGYPGDKGAIGLPGPPGMRGKAGPSGQTGDPGPQGPSGPPGPEGFPGDIGIPGQNGPEG 890

Query: 240 EKGMTGPR 247
            KG+ G R
Sbjct: 891 PKGLLGNR 898



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 99/230 (43%), Gaps = 57/230 (24%)

Query: 111  PPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP----- 162
            PPG +GP G++G  G     GE GV+G +GEKG  G  GP G  G  G  G+RG      
Sbjct: 1020 PPGNRGPKGRRGPRGPDGFSGEQGVQGAKGEKGDQGKRGPHGLIGKTGSPGERGAQGKPG 1079

Query: 163  ----------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE-------- 204
                      +G  G PGP+G+ GD G   P G++G  G  G++G  GL GE        
Sbjct: 1080 LPGPPGSTGERGLAGEPGPRGLQGDAG---PPGEVGAEGAPGIEGESGLQGELGAKGDVG 1136

Query: 205  ----------PGLDGIPGRNGMDGIPGK---------------DGLPGKDGIPGTNGTNG 239
                      PGL G PG  G +G+ GK               DG  G+ G PGT G  G
Sbjct: 1137 AAGSAGEAGEPGLRGEPGAPGEEGLQGKDGLKGGPGGRGLPGEDGKKGELGSPGTTGPVG 1196

Query: 240  EKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTI 289
              G+TGP G  G  GI G  G P     K E   + P  E      P  I
Sbjct: 1197 RPGLTGPPGPEGTVGILGQRGRP---GKKGEKGQMGPTGEIGSRGAPGQI 1243



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/134 (42%), Positives = 72/134 (53%), Gaps = 6/134 (4%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           +G  G+ G  G  G PG+ GP GP+G PG    +   G KGD G  G  G PG +G +G 
Sbjct: 616 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAISGEKGDKGLSGLMGPPGMQGDKGL 675

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           K   G+PG  GL G  G+PG  G  G PG  G  G+ G +G PG  G+ G  G+ G+ G 
Sbjct: 676 K---GHPGLPGLQGEQGIPGFAGNIGSPGYPGRQGLGGPEGNPGPKGVRGFIGSPGDVGP 732

Query: 244 TGPRGNRGKSGING 257
            GP G RG  G+ G
Sbjct: 733 LGPEGERGIPGLRG 746



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 75/144 (52%), Gaps = 4/144 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G  G  G  G+ G  G KG  G  G+PGV+GP G QG+PG  G +G +G  G  G 
Sbjct: 1421 PGIRGSPGTTGLAGSPGPQGAKGSSGLPGSPGVLGPKGEQGLPGQPGMQGKRGHQGAQGD 1480

Query: 172  QGIPGDEGKRGPKGDM-GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            QG  G+ G    KG++ G  G  GL G  G PG  G +G  G  G+ G  G  G  G  G
Sbjct: 1481 QGPCGEPGL---KGNLYGEHGVQGLRGFQGFPGPKGPEGDAGIVGISGPKGPTGQRGNTG 1537

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSG 254
              G  G  G  G TGPRG +G  G
Sbjct: 1538 PIGREGIIGPTGRTGPRGEKGFRG 1561



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 95/195 (48%), Gaps = 42/195 (21%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGA---------------PGVVGPPG 149
            E  P GLQG  G  GE+GA+G  G++GE   +GE GA               PG+ G PG
Sbjct: 1095 EPGPRGLQGDAGPPGEVGAEGAPGIEGESGLQGELGAKGDVGAAGSAGEAGEPGLRGEPG 1154

Query: 150  PQGIPGDEGK---------------RGPKGDMGYP---GPQGIPGDEGKRGPKGDMGY-- 189
              G  G +GK                G KG++G P   GP G PG  G  GP+G +G   
Sbjct: 1155 APGEEGLQGKDGLKGGPGGRGLPGEDGKKGELGSPGTTGPVGRPGLTGPPGPEGTVGILG 1214

Query: 190  ----PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                PG+ G  G+ G  GE G  G PG+ G  G  G  G  G  G  G  G NGE G+ G
Sbjct: 1215 QRGRPGKKGEKGQMGPTGEIGSRGAPGQIGESGPKGGRGTRGAVGHLGLMGPNGEPGIPG 1274

Query: 246  PRGNRGKSGINGVPG 260
             RG++G+ G++G+PG
Sbjct: 1275 YRGHQGQPGLSGLPG 1289



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 73/144 (50%), Gaps = 21/144 (14%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---G 194
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q I G++G +G  G MG PG     G
Sbjct: 615 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAISGEKGDKGLSGLMGPPGMQGDKG 674

Query: 195 LDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGT-------------- 237
           L G  GLPG  G  GIPG     G  G PG+ GL G +G PG  G               
Sbjct: 675 LKGHPGLPGLQGEQGIPGFAGNIGSPGYPGRQGLGGPEGNPGPKGVRGFIGSPGDVGPLG 734

Query: 238 -NGEKGMTGPRGNRGKSGINGVPG 260
             GE+G+ G RG +G  G  G PG
Sbjct: 735 PEGERGIPGLRGKKGLKGRQGFPG 758



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 94/214 (43%), Gaps = 51/214 (23%)

Query: 98  AMQGFCNSTKEYCP---------PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP 148
            ++GF  S  +  P         PGL+G  G KG  G  G+ G +G  G  G+PG+VG  
Sbjct: 719 GVRGFIGSPGDVGPLGPEGERGIPGLRGKKGLKGRQGFPGDFGDRGPAGPDGSPGLVGSI 778

Query: 149 GPQGIPGDEGKRG---PKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           GP G PG  G  G   P G  G PGP      +G+PG +G +G +G  G PG  G  G  
Sbjct: 779 GPPGFPGLRGSVGLVGPIGPSGIPGPMGLSGNKGLPGIKGDKGEQGIAGEPGESGYPGDK 838

Query: 200 G---LPGEPGLDGIPGRNGMD---------------------GIPGKDGLPGKDGIPGT- 234
           G   LPG PG+ G  G +G                       GIPG++G  G  G+ G  
Sbjct: 839 GAIGLPGPPGMRGKAGPSGQTGDPGPQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNR 898

Query: 235 --------NGTNGEKGMTGPRGNRGKSGINGVPG 260
                    GT GE+G  GP G  G SG  G  G
Sbjct: 899 GPPGPPGLKGTQGEEGPVGPFGELGPSGKPGQKG 932



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 63/114 (55%), Gaps = 9/114 (7%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY-PGRI--------GLDGRDGLPGEPGLDG 209
           KRGP+G  G  G  G+PG  G +GPKGD G+ PG+         GL G  G PG  G  G
Sbjct: 615 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAISGEKGDKGLSGLMGPPGMQGDKG 674

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           + G  G+ G+ G+ G+PG  G  G+ G  G +G+ GP GN G  G+ G  G+P 
Sbjct: 675 LKGHPGLPGLQGEQGIPGFAGNIGSPGYPGRQGLGGPEGNPGPKGVRGFIGSPG 728



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 85/182 (46%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-------------------- 152
           GL G  G KGE G  GE G  G  G+KGA G+ GPPG +G                    
Sbjct: 812 GLPGIKGDKGEQGIAGEPGESGYPGDKGAIGLPGPPGMRGKAGPSGQTGDPGPQGPSGPP 871

Query: 153 ----------IPGDEGKRGPKGDMG------YPGPQGIPGDEGKRGPKGDM---GYPGRI 193
                     IPG  G  GPKG +G       PG +G  G+EG  GP G++   G PG+ 
Sbjct: 872 GPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPVGPFGELGPSGKPGQK 931

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G  G  G  G  G PG  G  G  G  GLPG+ G+ G+ G  G++G  GP G +G+ 
Sbjct: 932 GYAGEQGPGGLKGEVGDPGNVGTIGETGPVGLPGEVGMTGSTGEKGQRGSPGPLGPQGQK 991

Query: 254 GI 255
           G+
Sbjct: 992 GV 993



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 77/174 (44%), Gaps = 33/174 (18%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE------------------RGEKGA 141
           QG      E   PG +G IG  G  G +G+ G  G+                   G+ G 
Sbjct: 823 QGIAGEPGESGYPGDKGAIGLPGPPGMRGKAGPSGQTGDPGPQGPSGPPGPEGFPGDIGI 882

Query: 142 PGVVGPPGPQGIPGD------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           PG  GP GP+G+ G+            +G+ GP G  G  GP G PG +G  G +G  G 
Sbjct: 883 PGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPVGPFGELGPSGKPGQKGYAGEQGPGGL 942

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  GE G  G+PG  GM G  G+ G   + G PG  G  G+KG+
Sbjct: 943 KGEVGDPGNVGTIGETGPVGLPGEVGMTGSTGEKG---QRGSPGPLGPQGQKGV 993


>gi|348531062|ref|XP_003453029.1| PREDICTED: collagen alpha-1(X) chain-like isoform 1 [Oreochromis
           niloticus]
          Length = 662

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/165 (47%), Positives = 93/165 (56%), Gaps = 10/165 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRGPKGDMG 167
           G  G  G++G+ GA G MG +G  G  G+PG      VG PGP GIPG  G RG  G  G
Sbjct: 107 GAPGKPGERGQPGATGPMGHRGAPGTPGSPGPSGLSAVGKPGPSGIPGAMGPRGEPGLKG 166

Query: 168 YPGPQGIPGDEGKR--GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +PG  G+PG +G+R  G  G  G  G +G  G  G+PG+PG+ G PG  G  G PGK G 
Sbjct: 167 HPGIPGVPGPKGERGIGIPGVQGPAGPVGPMGPSGMPGKPGI-GKPGATGYPGEPGKPGE 225

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNR--GKSGINGVPGTPAICAYK 268
           PG+DG PG  G +G KG TGP G    GK G NG PG P     K
Sbjct: 226 PGRDGSPGPMGVSGPKGHTGPPGTGAPGKPGQNGTPGMPGPMGVK 270



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 78/162 (48%), Gaps = 20/162 (12%)

Query: 113 GLQGPIGQKGE-----IGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKG 164
           G QGP GQ G      +G  GE G+ G RG  G+PG  G    PGP G  G  G  GP G
Sbjct: 271 GPQGPAGQPGSPGMPGVGKTGEPGIPGSRGAPGSPGTTGQKGEPGPTGFTGQPGATGPMG 330

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGY------------PGRIGLDGRDGLPGEPGLDGIPG 212
             G  G +G  G+ G  GPKGD+G              G  G  G+ G PG  G  GIPG
Sbjct: 331 PAGPQGARGFQGEAGPVGPKGDIGMVGAPGPRGTKGEQGAQGFTGKPGTPGAVGPPGIPG 390

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            NG  G  G  G  G  G+PG NG  G KG TG  G  GKSG
Sbjct: 391 HNGAQGPKGSQGHAGAPGLPGINGAQGPKGHTGAPGAPGKSG 432



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 87/182 (47%), Gaps = 14/182 (7%)

Query: 112 PGLQGPIGQKGEIGAKG-----EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           PG+QGP G  G +G  G      +G  G  G  G PG  G PG  G PG  G  GPKG  
Sbjct: 185 PGVQGPAGPVGPMGPSGMPGKPGIGKPGATGYPGEPGKPGEPGRDGSPGPMGVSGPKGHT 244

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG--RNGMDGIPGKDG 224
           G PG  G PG  G+ G     G PG +G+ G  G  G+PG  G+PG  + G  GIPG  G
Sbjct: 245 GPPG-TGAPGKPGQNG---TPGMPGPMGVKGPQGPAGQPGSPGMPGVGKTGEPGIPGSRG 300

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLL 284
            PG    PGT G  GE G TG  G  G +G  G  G      ++ E+  + P  +   + 
Sbjct: 301 APGS---PGTTGQKGEPGPTGFTGQPGATGPMGPAGPQGARGFQGEAGPVGPKGDIGMVG 357

Query: 285 IP 286
            P
Sbjct: 358 AP 359



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 54/96 (56%), Gaps = 12/96 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGA---------PGVVGPPGPQGIPGDEGKRGPK 163
           G  GP+G KG+IG  G  G +G +GE+GA         PG VGPPG   IPG  G +GPK
Sbjct: 342 GEAGPVGPKGDIGMVGAPGPRGTKGEQGAQGFTGKPGTPGAVGPPG---IPGHNGAQGPK 398

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G  G+ G  G+PG  G +GPKG  G PG  G  G  
Sbjct: 399 GSQGHAGAPGLPGINGAQGPKGHTGAPGAPGKSGES 434



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 65/122 (53%), Gaps = 15/122 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG  GP+G  G  GA+G  G  G  G KG  G+VG PGP+G  G++G +G  G  G PG 
Sbjct: 323 PGATGPMGPAGPQGARGFQGEAGPVGPKGDIGMVGAPGPRGTKGEQGAQGFTGKPGTPGA 382

Query: 171 --PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             P GIPG  G +GPKG  G+          G PG PG++G  G  G  G P   G PGK
Sbjct: 383 VGPPGIPGHNGAQGPKGSQGH---------AGAPGLPGINGAQGPKGHTGAP---GAPGK 430

Query: 229 DG 230
            G
Sbjct: 431 SG 432



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 77/174 (44%), Gaps = 22/174 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP-----QGIPGDEGKRGPKGDM 166
           PG  G  G+ G  G+ G MGV G +G  G PG   P  P      G+PG  G +GP+G  
Sbjct: 217 PGEPGKPGEPGRDGSPGPMGVSGPKGHTGPPGTGAPGKPGQNGTPGMPGPMGVKGPQGPA 276

Query: 167 GYPGPQGIPG--DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G PG  G+PG    G+ G  G  G PG  G  G+ G PG  G  G PG  G  G  G  G
Sbjct: 277 GQPGSPGMPGVGKTGEPGIPGSRGAPGSPGTTGQKGEPGPTGFTGQPGATGPMGPAGPQG 336

Query: 225 L-----------PGKD----GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                       P  D    G PG  GT GE+G  G  G  G  G  G PG P 
Sbjct: 337 ARGFQGEAGPVGPKGDIGMVGAPGPRGTKGEQGAQGFTGKPGTPGAVGPPGIPG 390



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/134 (41%), Positives = 62/134 (46%), Gaps = 25/134 (18%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           + G PGV G PG  G PG  G+RG                 G  GP G  G PG  G  G
Sbjct: 93  QAGKPGVPGSPGKSGAPGKPGERG---------------QPGATGPMGHRGAPGTPGSPG 137

Query: 198 RDGLP--GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM-----TGPRGNR 250
             GL   G+PG  GIPG  G  G PG  G PG   IPG  G  GE+G+      GP G  
Sbjct: 138 PSGLSAVGKPGPSGIPGAMGPRGEPGLKGHPG---IPGVPGPKGERGIGIPGVQGPAGPV 194

Query: 251 GKSGINGVPGTPAI 264
           G  G +G+PG P I
Sbjct: 195 GPMGPSGMPGKPGI 208



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 11/92 (11%)

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT-----GPR---- 247
           G+ G+PG PG  G PG+ G  G PG  G  G  G PGT G+ G  G++     GP     
Sbjct: 95  GKPGVPGSPGKSGAPGKPGERGQPGATGPMGHRGAPGTPGSPGPSGLSAVGKPGPSGIPG 154

Query: 248 --GNRGKSGINGVPGTPAICAYKRESCSLLPN 277
             G RG+ G+ G PG P +   K E    +P 
Sbjct: 155 AMGPRGEPGLKGHPGIPGVPGPKGERGIGIPG 186



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 32/61 (52%)

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G PG  G PGK G PG  G  G+ G TGP G+RG  G  G PG   + A  +   S +P 
Sbjct: 95  GKPGVPGSPGKSGAPGKPGERGQPGATGPMGHRGAPGTPGSPGPSGLSAVGKPGPSGIPG 154

Query: 278 S 278
           +
Sbjct: 155 A 155


>gi|340378964|ref|XP_003387997.1| PREDICTED: hypothetical protein LOC100639283 [Amphimedon
            queenslandica]
          Length = 2303

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 89/174 (51%), Gaps = 21/174 (12%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMG 167
            P G QG  G  G  G  G  GV G RGE G PGV+G  GP   QG PG  G +G +G  G
Sbjct: 1111 PEGDQGRPGSLGSPGLPGAAGVDGMRGELGEPGVMGEQGPRGDQGPPGPLGAQGARGSTG 1170

Query: 168  YPGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRD------------GLPGEPGLDGIPG 212
            +PG  G P   G +G  G +G  G+PG  G  GRD            G PG PG+ G PG
Sbjct: 1171 HPGRTGSPGMDGTDGVDGEEGQRGHPGAQGPIGRDGPEGPRGEKGPLGAPGSPGVVGNPG 1230

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGTPA 263
            + G  G+ G  G  G  GIPG  G     G  G TGP+G+RG+ G++G  G P 
Sbjct: 1231 QRGAPGLTGSRGPTGMVGIPGEQGEEGPAGRDGSTGPKGDRGRDGVDGRDGKPG 1284



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 86/170 (50%), Gaps = 21/170 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QGPIG+ G  G +GE   KG  G  G+PGVVG PG +G PG  G RGP G +G PG 
Sbjct: 1196 PGAQGPIGRDGPEGPRGE---KGPLGAPGSPGVVGNPGQRGAPGLTGSRGPTGMVGIPGE 1252

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKDGLPGK 228
            QG  G  G+ G  G  G  GR G+DGRDG PG+ G     G PG  G  G  G+DG  G 
Sbjct: 1253 QGEEGPAGRDGSTGPKGDRGRDGVDGRDGKPGQRGRSGPRGKPGNKGPSGDLGQDGGYGF 1312

Query: 229  DGIPG---------------TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+PG                 G  G+ G+ G  G +G  G  G  G P 
Sbjct: 1313 AGVPGGRGESGSPGEPGPPGPRGVAGDPGLPGDYGVKGSKGAQGQKGPPG 1362



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 92/197 (46%), Gaps = 48/197 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------------------VVGP 147
            PG+ G IG++G+ G +G  GV G  G+ GAPG                        VVG 
Sbjct: 1586 PGVTGFIGEQGQRGDQGTKGVGGTPGQAGAPGDPGDIGSSGSSGNPGVSGNDGQPGVVGD 1645

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------------------GPKGD 186
             GP+G  G +G+RGP G  G  GPQG  G++G++                     GPKG 
Sbjct: 1646 KGPRGQKGTKGERGPSGADGRRGPQGAKGNKGEKGPLGPPGAPGRKGRQGSQGNPGPKGV 1705

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGM 243
             G  G  G  GR GL GE G  G  G  G+ G P   G  GL G++G PG+ G+ G KG 
Sbjct: 1706 QGMTGDTGARGRTGLGGEKGPPGAKGTAGLSGDPGDAGDAGLLGREGTPGSPGSTGLKGD 1765

Query: 244  TGPRGNRGKSGINGVPG 260
             G  G+RG  G+ G  G
Sbjct: 1766 KGSAGDRGPRGVLGRTG 1782



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYP 169
            GL+G  G  G+ G +G +G  G  GEKG  G  GP GPQG     GD G +G  G+ G P
Sbjct: 1761 GLKGDKGSAGDRGPRGVLGRTGNVGEKGNKGAAGPAGPQGEAGSAGDPGDKGEVGNSGDP 1820

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------P 220
            GP G  G++G++G KGD G  G  G  G  G  G  G  G  G  G+ G+          
Sbjct: 1821 GPVGPAGEKGQKGDKGDAGNVGEEGAKGSKGPQGPAGAAGPSGPIGIKGVQGGPGPAGPA 1880

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G+ G DGIPG +G  G  G  GP G +G  G+ G
Sbjct: 1881 GPKGIRGNDGIPGVSGDAGRNGAPGPDGPKGDKGVPG 1917



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 74/150 (49%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G  G  G+ GA+G  G+ GE+G  GA G  G  G  G  GD G  G +G  G PG 
Sbjct: 1700 PGPKGVQGMTGDTGARGRTGLGGEKGPPGAKGTAGLSGDPGDAGDAGLLGREGTPGSPGS 1759

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+ GD+G  G +G  G  GR G  G  G  G  G  G  G  G  G PG  G  G  G 
Sbjct: 1760 TGLKGDKGSAGDRGPRGVLGRTGNVGEKGNKGAAGPAGPQGEAGSAGDPGDKGEVGNSGD 1819

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG  G  GEKG  G +G+ G  G  G  G+
Sbjct: 1820 PGPVGPAGEKGQKGDKGDAGNVGEEGAKGS 1849



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 76/163 (46%), Gaps = 21/163 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------------VVGPPGPQ 151
            G +GP GQKG  G +G  G  G RG +GA G                       G PGP+
Sbjct: 1644 GDKGPRGQKGTKGERGPSGADGRRGPQGAKGNKGEKGPLGPPGAPGRKGRQGSQGNPGPK 1703

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G+ G  G  G +G  G  G +G PG +G  G  GD G  G  GL GR+G PG PG  G+ 
Sbjct: 1704 GVQGMTGDTGARGRTGLGGEKGPPGAKGTAGLSGDPGDAGDAGLLGREGTPGSPGSTGLK 1763

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G  G  G  G  G+ G+ G  G  G  G  G  GP+G  G +G
Sbjct: 1764 GDKGSAGDRGPRGVLGRTGNVGEKGNKGAAGPAGPQGEAGSAG 1806



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 33/176 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G +GE G+ G+ G KGE G  G PG VGP G      ++G++G KGD G  G +
Sbjct: 1791 GAAGPAGPQGEAGSAGDPGDKGEVGNSGDPGPVGPAG------EKGQKGDKGDAGNVGEE 1844

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDG------------RDGLPGEPGLDGIPGRNGMDGIP 220
            G  G +G +GP G  G  G IG+ G              G+ G  G+ G+ G  G +G P
Sbjct: 1845 GAKGSKGPQGPAGAAGPSGPIGIKGVQGGPGPAGPAGPKGIRGNDGIPGVSGDAGRNGAP 1904

Query: 221  GKDGLPGKDGIPG---------------TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G DG  G  G+PG                 G  G +G  GP G  G  G+ G  G 
Sbjct: 1905 GPDGPKGDKGVPGGQGFIGPPGPIGGQGARGDRGAQGEPGPLGETGLPGVKGAVGA 1960



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 77/152 (50%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  G  G+KG  GAKG  G+ G+ G+ G  G++G  G  G PG  G +G KG  G  GP+
Sbjct: 1716 GRTGLGGEKGPPGAKGTAGLSGDPGDAGDAGLLGREGTPGSPGSTGLKGDKGSAGDRGPR 1775

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+ G  G  G KG+ G  G  G  G  G  G+PG  G  G +G  G  G  G  G+ G  
Sbjct: 1776 GVLGRTGNVGEKGNKGAAGPAGPQGEAGSAGDPGDKGEVGNSGDPGPVGPAGEKGQKGDK 1835

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  GE+G  G +G +G +G  G  G   I
Sbjct: 1836 GDAGNVGEEGAKGSKGPQGPAGAAGPSGPIGI 1867



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 71/149 (47%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E  PPG +G  G  G+ G  G+ G+ G  G  G+PG  G  G +G  GD G RG  G  G
Sbjct: 1723 EKGPPGAKGTAGLSGDPGDAGDAGLLGREGTPGSPGSTGLKGDKGSAGDRGPRGVLGRTG 1782

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
              G +G  G  G  GP+G+ G  G  G  G  G  G+PG  G  G  G  G  G  G  G
Sbjct: 1783 NVGEKGNKGAAGPAGPQGEAGSAGDPGDKGEVGNSGDPGPVGPAGEKGQKGDKGDAGNVG 1842

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            ++G  G+ G  G  G  GP G  G  G+ 
Sbjct: 1843 EEGAKGSKGPQGPAGAAGPSGPIGIKGVQ 1871



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 73/169 (43%), Gaps = 27/169 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEG 158
            P G +G  G KG+ G  GE G KG +G +G  G  GP GP GI G             +G
Sbjct: 1825 PAGEKGQKGDKGDAGNVGEEGAKGSKGPQGPAGAAGPSGPIGIKGVQGGPGPAGPAGPKG 1884

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG---------------RIGLDGRDGLPG 203
             RG  G  G  G  G  G  G  GPKGD G PG                 G  G  G PG
Sbjct: 1885 IRGNDGIPGVSGDAGRNGAPGPDGPKGDKGVPGGQGFIGPPGPIGGQGARGDRGAQGEPG 1944

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
              G  G+PG  G  G  G+ G  G+DG+ G  G  G  G  G  G RG+
Sbjct: 1945 PLGETGLPGVKGAVGATGERGPAGRDGVKGQKGQPGNPGRRGASGARGE 1993



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 70/149 (46%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +GP G KG  G  G+ G  G+ G  G  G  G PG  G+ GD+G  G +G  G  G  
Sbjct: 1722 GEKGPPGAKGTAGLSGDPGDAGDAGLLGREGTPGSPGSTGLKGDKGSAGDRGPRGVLGRT 1781

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  G++G +G  G  G  G  G  G  G  GE G  G PG  G  G  G+ G  G  G  
Sbjct: 1782 GNVGEKGNKGAAGPAGPQGEAGSAGDPGDKGEVGNSGDPGPVGPAGEKGQKGDKGDAGNV 1841

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G KG  GP G  G SG  G+ G 
Sbjct: 1842 GEEGAKGSKGPQGPAGAAGPSGPIGIKGV 1870



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 85/212 (40%), Gaps = 51/212 (24%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGI 153
            +  QG      +    G QGP G +G  GA G  G KG RG  G+   PG VG  G +G+
Sbjct: 1454 IGQQGANGVAGDIGERGPQGPQGARGATGAFGPRGAKGSRGAPGSPGRPGSVGDTGVRGL 1513

Query: 154  PGDE---------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY--------- 189
             G +               G+ G +G+ G PGPQG PG  G+ G  G  G          
Sbjct: 1514 AGRDGQPGPPGQPGPIGQAGQVGARGERGAPGPQGEPGTHGRPGQAGKDGATGAPGEPGS 1573

Query: 190  ------------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------------L 225
                        PG  G  G  G  G+ G  G+ G  G  G PG  G            +
Sbjct: 1574 PGGPGTKGPTGEPGVTGFIGEQGQRGDQGTKGVGGTPGQAGAPGDPGDIGSSGSSGNPGV 1633

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G DG PG  G  G +G  G +G RG SG +G
Sbjct: 1634 SGNDGQPGVVGDKGPRGQKGTKGERGPSGADG 1665



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 70/178 (39%), Gaps = 39/178 (21%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            G  G  G  G  G +G PG +G  G  G+ GD G+RGP+G  G  G  G  G  G +G +
Sbjct: 1434 GKDGTPGAVGTTGPRGFPGSIGQQGANGVAGDIGERGPQGPQGARGATGAFGPRGAKGSR 1493

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLD---------------GIPGRNGMDGIPGKDGLPGKD 229
            G  G PGR G  G  G+ G  G D               G  G  G  G PG  G PG  
Sbjct: 1494 GAPGSPGRPGSVGDTGVRGLAGRDGQPGPPGQPGPIGQAGQVGARGERGAPGPQGEPGTH 1553

Query: 230  GIPGTNGTNGEK------------------------GMTGPRGNRGKSGINGVPGTPA 263
            G PG  G +G                          G  G +G RG  G  GV GTP 
Sbjct: 1554 GRPGQAGKDGATGAPGEPGSPGGPGTKGPTGEPGVTGFIGEQGQRGDQGTKGVGGTPG 1611



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 82/181 (45%), Gaps = 30/181 (16%)

Query: 113  GLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            G  G  G KGE+G  G+   +G  GE+G+KG  G  G  G +G  G +G +GP G  G  
Sbjct: 1803 GSAGDPGDKGEVGNSGDPGPVGPAGEKGQKGDKGDAGNVGEEGAKGSKGPQGPAGAAGPS 1862

Query: 170  GPQGIPGDE---------GKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPG----- 212
            GP GI G +         G +G +G+ G PG  G  GR+G P   G  G  G+PG     
Sbjct: 1863 GPIGIKGVQGGPGPAGPAGPKGIRGNDGIPGVSGDAGRNGAPGPDGPKGDKGVPGGQGFI 1922

Query: 213  ----------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                        G  G  G+ G  G+ G+PG  G  G  G  GP G  G  G  G PG P
Sbjct: 1923 GPPGPIGGQGARGDRGAQGEPGPLGETGLPGVKGAVGATGERGPAGRDGVKGQKGQPGNP 1982

Query: 263  A 263
             
Sbjct: 1983 G 1983



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 71/154 (46%), Gaps = 27/154 (17%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            +G+ GA+GE G  GE G  G  G VG  G +G  G +G +G KG  G PG +G  G  G+
Sbjct: 1934 RGDRGAQGEPGPLGETGLPGVKGAVGATGERGPAGRDGVKGQKGQPGNPGRRGASGARGE 1993

Query: 181  RGP---------KGDMGYPGRIGLDGRDGLPGEPGLD------------------GIPGR 213
            +GP         KGD G PG  G  G  G  G  G+D                  G PGR
Sbjct: 1994 QGPSGGTGPTGIKGDQGRPGLAGDAGAKGYHGSHGIDGDVGPPGPPGPKGPSGEQGTPGR 2053

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
             G DG  G DG  G  G  G  GT G+KG  G +
Sbjct: 2054 AGQDGRIGADGAFGSAGGKGDEGTKGQKGRKGQK 2087



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 72/166 (43%), Gaps = 24/166 (14%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGER------------GEKGAPGVVGPPGPQGIPGDEGKR 160
            G +GP G  G  G +G  G KGE+            G +G+ G  GP G QG+ GD G R
Sbjct: 1656 GERGPSGADGRRGPQGAKGNKGEKGPLGPPGAPGRKGRQGSQGNPGPKGVQGMTGDTGAR 1715

Query: 161  G------------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G             KG  G  G  G  GD G  G +G  G PG  GL G  G  G+ G  
Sbjct: 1716 GRTGLGGEKGPPGAKGTAGLSGDPGDAGDAGLLGREGTPGSPGSTGLKGDKGSAGDRGPR 1775

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G+ GR G  G  G  G  G  G  G  G+ G+ G  G  GN G  G
Sbjct: 1776 GVLGRTGNVGEKGNKGAAGPAGPQGEAGSAGDPGDKGEVGNSGDPG 1821



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 73/150 (48%), Gaps = 15/150 (10%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------GKRGPKGDMGY 168
            KG  G  G  GV G+ G  GAPG  GP G +G+PG +            G RG +G  G 
Sbjct: 1883 KGIRGNDGIPGVSGDAGRNGAPGPDGPKGDKGVPGGQGFIGPPGPIGGQGARGDRGAQGE 1942

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PGP    G+ G  G KG +G  G  G  GRDG+ G+ G  G PGR G  G  G+ G  G 
Sbjct: 1943 PGPL---GETGLPGVKGAVGATGERGPAGRDGVKGQKGQPGNPGRRGASGARGEQGPSGG 1999

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G  G  G  G  G+ G  G +G  G +G+
Sbjct: 2000 TGPTGIKGDQGRPGLAGDAGAKGYHGSHGI 2029



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/124 (43%), Positives = 66/124 (53%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +GP G+ G  G KG+ G  G  G  G PG  G  GP+G PG++G  G  G  G  G  
Sbjct: 1254 GEEGPAGRDGSTGPKGDRGRDGVDGRDGKPGQRGRSGPRGKPGNKGPSGDLGQDGGYGFA 1313

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+PG  G+ G  G+ G PG  G+ G  GLPG+ G+ G  G  G  G PGK G  G DG  
Sbjct: 1314 GVPGGRGESGSPGEPGPPGPRGVAGDPGLPGDYGVKGSKGAQGQKGPPGKSGKDGYDGRK 1373

Query: 233  GTNG 236
            G  G
Sbjct: 1374 GAQG 1377



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 85/236 (36%), Gaps = 84/236 (35%)

Query: 122  GEIGAKGEMGV------------------------------------------------- 132
            G++GA+GE G                                                  
Sbjct: 1533 GQVGARGERGAPGPQGEPGTHGRPGQAGKDGATGAPGEPGSPGGPGTKGPTGEPGVTGFI 1592

Query: 133  --KGERGEKGAPGVVGPPGPQGIPGDE------------------------GKRGPKGDM 166
              +G+RG++G  GV G PG  G PGD                         G +GP+G  
Sbjct: 1593 GEQGQRGDQGTKGVGGTPGQAGAPGDPGDIGSSGSSGNPGVSGNDGQPGVVGDKGPRGQK 1652

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGR---------IGLDGRDGLPGEPGLDGIPGRNGMD 217
            G  G +G  G +G+RGP+G  G  G           G  GR G  G PG  G+ G  G  
Sbjct: 1653 GTKGERGPSGADGRRGPQGAKGNKGEKGPLGPPGAPGRKGRQGSQGNPGPKGVQGMTGDT 1712

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
            G  G+ GL G+ G PG  GT G  G  G  G+ G  G  G PG+P     K +  S
Sbjct: 1713 GARGRTGLGGEKGPPGAKGTAGLSGDPGDAGDAGLLGREGTPGSPGSTGLKGDKGS 1768



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 76/217 (35%), Gaps = 66/217 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------VVGPPGPQGIPGDE 157
            G  GP G+ G  G  G++G  G  G  G PG                 G  G  G+PGD 
Sbjct: 1287 GRSGPRGKPGNKGPSGDLGQDGGYGFAGVPGGRGESGSPGEPGPPGPRGVAGDPGLPGDY 1346

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG----------------------------- 188
            G +G KG  G  GP G  G +G  G KG  G                             
Sbjct: 1347 GVKGSKGAQGQKGPPGKSGKDGYDGRKGAQGKVGPAGPGGTPGTKGKPGGPGAIGSFGPN 1406

Query: 189  -YPGRIG------------------LDGRDGLPGEPGLDG---IPGRNGMDGIPGKDGLP 226
               G +G                  ++G+DG PG  G  G    PG  G  G  G  G  
Sbjct: 1407 GAKGALGSPGRVGGRGARGPRGAPGINGKDGTPGAVGTTGPRGFPGSIGQQGANGVAGDI 1466

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G  G  G  G  G  GPRG +G  G  G PG P 
Sbjct: 1467 GERGPQGPQGARGATGAFGPRGAKGSRGAPGSPGRPG 1503



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 66/134 (49%), Gaps = 21/134 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGK 159
            PG++G +G  GE G  G  GVKG++G+ G PG  G  G +G            I GD+G+
Sbjct: 1952 PGVKGAVGATGERGPAGRDGVKGQKGQPGNPGRRGASGARGEQGPSGGTGPTGIKGDQGR 2011

Query: 160  RGPKGDMG---YPGPQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G  GD G   Y G  GI      PG  G +GP G+ G PGR G DGR G  G  G  G 
Sbjct: 2012 PGLAGDAGAKGYHGSHGIDGDVGPPGPPGPKGPSGEQGTPGRAGQDGRIGADGAFGSAGG 2071

Query: 211  PGRNGMDGIPGKDG 224
             G  G  G  G+ G
Sbjct: 2072 KGDEGTKGQKGRKG 2085



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 80/206 (38%), Gaps = 54/206 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGPQGIPGD 156
            PG +GP G  G+ G  G  GV G                RG  G PG+ G  G +G  G 
Sbjct: 1295 PGNKGPSGDLGQDGGYGFAGVPGGRGESGSPGEPGPPGPRGVAGDPGLPGDYGVKGSKGA 1354

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGK---------------------------RGPKGDMGY 189
            +G++GP G  G  G  G  G +GK                            G KG +G 
Sbjct: 1355 QGQKGPPGKSGKDGYDGRKGAQGKVGPAGPGGTPGTKGKPGGPGAIGSFGPNGAKGALGS 1414

Query: 190  ------------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
                         G  G++G+DG PG  G  G  G  G  G  G +G+ G  G  G  G 
Sbjct: 1415 PGRVGGRGARGPRGAPGINGKDGTPGAVGTTGPRGFPGSIGQQGANGVAGDIGERGPQGP 1474

Query: 238  NGEKGMTGPRGNRGKSGINGVPGTPA 263
             G +G TG  G RG  G  G PG+P 
Sbjct: 1475 QGARGATGAFGPRGAKGSRGAPGSPG 1500



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 9/92 (9%)

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGKD 229
            G+ GD G  GP+GD G PG +G       PG PG    DG+ G  G  G+ G+ G  G  
Sbjct: 1101 GVTGDPGWPGPEGDQGRPGSLGS------PGLPGAAGVDGMRGELGEPGVMGEQGPRGDQ 1154

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG  G  G +G TG  G  G  G++G  G 
Sbjct: 1155 GPPGPLGAQGARGSTGHPGRTGSPGMDGTDGV 1186


>gi|348586281|ref|XP_003478897.1| PREDICTED: collagen alpha-1(XXVII) chain-like isoform 2 [Cavia
            porcellus]
          Length = 1865

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 107/228 (46%), Gaps = 38/228 (16%)

Query: 88   LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA-------------------KG 128
            + A     L    G         PPGL+G  G++GE G                    +G
Sbjct: 1303 MGAQGEPGLAGYDGHKGIAGPLGPPGLKGEKGEQGEDGKAEGPPGPPGDRGPMGDRGDRG 1362

Query: 129  EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
            E G  G RG++G  G+ G PG QG+PG  G RG       PGP+G  G+EG +G  G  G
Sbjct: 1363 EPGDPGYRGQEGVQGLRGKPGQQGLPGHPGPRG------QPGPKGSKGEEGPKGKPGKAG 1416

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTG 245
             PGR G+ G  GLPG     G+ GR G +G  G DGLPG+DG  G  G    +G+ G  G
Sbjct: 1417 APGRRGIQGLQGLPGP---RGVVGRQGPEGTAGLDGLPGRDGRAGQQGEQGDDGDPGPVG 1473

Query: 246  PRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
            P G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 1474 PAGRRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1514



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 104/211 (49%), Gaps = 17/211 (8%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP GQ G  G+KGE G KG+ G+ GAPG  G  G QG+PG  
Sbjct: 1374 GVQGLRGKPGQQGLPGHPGPRGQPGPKGSKGEEGPKGKPGKAGAPGRRGIQGLQGLPGPR 1433

Query: 158  ---GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIP 211
               G++GP+G  G  G  G  G  G++G +GD G PG +G  GR G PG    PG  G P
Sbjct: 1434 GVVGRQGPEGTAGLDGLPGRDGRAGQQGEQGDDGDPGPVGPAGRRGNPGVAGLPGAQGPP 1493

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  G  G+PG+ G PGK G  G  G  G +G  G +G  G SG  G PG   +   K   
Sbjct: 1494 GFKGESGLPGQLGPPGKRGTEGGMGLPGSQGEPGSKGQPGDSGEMGFPGVAGLFGPKG-- 1551

Query: 272  CSLLPNSETSQLLI-----PPTIVGSEHIFS 297
                P  +T    I     PP ++G E I  
Sbjct: 1552 ----PPGDTGFKGIQGPRGPPGLMGKEGIIG 1578



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 82/150 (54%), Gaps = 12/150 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEGK 159
            PG  G  GQ+GE G  G+ G  G  G +G PGV G PG QG PG              GK
Sbjct: 1451 PGRDGRAGQQGEQGDDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGK 1510

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            RG +G MG PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+
Sbjct: 1511 RGTEGGMGLPGSQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDTGFKGIQGPRGPPGL 1570

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             GK+G+ G  G  G +G  G KG  G RG+
Sbjct: 1571 MGKEGIIGPLGSQGPSGLPGRKGDKGSRGD 1600



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 78/145 (53%), Gaps = 12/145 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG++G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++
Sbjct: 677 GQKGDLGLSPGQAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQ 727

Query: 179 GKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+ GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  
Sbjct: 728 GQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGIPGLFGLPGSDGERGLPGVPGKR 787

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  G RG  G++G PG
Sbjct: 788 GKMGRPGFPGDFGERGPPGLDGNPG 812



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 92/182 (50%), Gaps = 24/182 (13%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KG +G  GE G+KG++GE+G PGV G PG QG  G +G  G  G  G PG
Sbjct: 834  PLGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGEPGFQGDKGSQGLPGVPGARGKPG 893

Query: 171  PQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------ 215
            P G  GD+G           G  GD+G PG  G +G  G PG  GL G  G+ G      
Sbjct: 894  PTGRVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGTKGKPGARGLPGPRGQLGPEGDEG 953

Query: 216  ---------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                     ++G+PG+ G PG+ G  G+ G  GE G  GP G +G  G  G+ G P I  
Sbjct: 954  PMGPPGAPGVEGLPGRKGFPGRPGPDGSKGEPGEPGRPGPMGEQGLMGFIGLVGEPGIVG 1013

Query: 267  YK 268
             K
Sbjct: 1014 EK 1015



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 88/170 (51%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 706 PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGI 765

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMD----- 217
           PG  G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG  G+      
Sbjct: 766 PGLFGLPGSDGER---GLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGDLGLPGPPGV 822

Query: 218 -------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                  G  G  G PG  G+ G  G  GE G+ G +G +G  G++G PG
Sbjct: 823 PGLLGDMGALGPLGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGEPG 872



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 84/187 (44%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKG-------- 164
           GP G +G IG  G  G+ G  GE+G PGV G  G     G PGD G+RGP G        
Sbjct: 755 GPKGSRGYIGIPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGDL 814

Query: 165 -------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                        DMG  GP G PG +G +G  G +G PG  G  G  G+P   GEPG  
Sbjct: 815 GLPGPPGVPGLLGDMGALGPLGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGEPGFQ 874

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---------------GEKGMTGPRGNRGKS 253
           G  G  G+ G+PG  G PG  G  G  G+                G  G  GP G +GK 
Sbjct: 875 GDKGSQGLPGVPGARGKPGPTGRVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGTKGKP 934

Query: 254 GINGVPG 260
           G  G+PG
Sbjct: 935 GARGLPG 941



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 87/186 (46%), Gaps = 36/186 (19%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDMGYPGP 171
            +G KG  GA GE G+ GE G KG  G      P G PG++      G+ G +GD G  GP
Sbjct: 1150 MGPKGPPGAVGEPGIPGEAGMKGDLG------PLGAPGEQGLIGQRGEPGLEGDSGPVGP 1203

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+ GD G  GP G+ G  G+ GL G DGLPG PG+ GI    G +G PGK G  G+ G 
Sbjct: 1204 DGLKGDRGDPGPDGERGEKGQEGLKGEDGLPGPPGITGI---RGPEGKPGKQGEKGRTGA 1260

Query: 232  PGTNGTNGE---------------------KGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G+ G  G+                     +G  GP G  G+ G  G PG      +K  
Sbjct: 1261 KGSKGYPGQLGEMGVPGDSGPPGTPGPKGSRGSLGPVGAPGRMGAQGEPGLAGYDGHKGI 1320

Query: 271  SCSLLP 276
            +  L P
Sbjct: 1321 AGPLGP 1326



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 87/188 (46%), Gaps = 51/188 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGK 159
           PG  G  G++G+ G +G  G KG  G +G PG VG PGP+G            +PG +G+
Sbjct: 718 PGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGIPGLFGLPGSDGE 777

Query: 160 RG------PKGDMGYPGPQGIPGDEGKRGPK---------------------------GD 186
           RG       +G MG PG    PGD G+RGP                            G 
Sbjct: 778 RGLPGVPGKRGKMGRPG---FPGDFGERGPPGLDGNPGDLGLPGPPGVPGLLGDMGALGP 834

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGM 243
           +GYPG  G+ G  G  GEPGL G  G  G+ G+   PG  G  G  G+PG  G  G+ G 
Sbjct: 835 LGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGEPGFQGDKGSQGLPGVPGARGKPGP 894

Query: 244 TGPRGNRG 251
           TG  G++G
Sbjct: 895 TGRVGDKG 902



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 80/181 (44%), Gaps = 39/181 (21%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------ 162
            PG+ G  G KG++G   A GE G+ G+RGE G  G  GP GP G+ GD G  GP      
Sbjct: 1162 PGIPGEAGMKGDLGPLGAPGEQGLIGQRGEPGLEGDSGPVGPDGLKGDRGDPGPDGERGE 1221

Query: 163  ------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------ 210
                  KG+ G PGP GI G  G  G  G  G  GR G  G  G PG+ G  G+      
Sbjct: 1222 KGQEGLKGEDGLPGPPGITGIRGPEGKPGKQGEKGRTGAKGSKGYPGQLGEMGVPGDSGP 1281

Query: 211  ------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                              PGR G  G PG  G  G  GI G  G  G KG  G +G  GK
Sbjct: 1282 PGTPGPKGSRGSLGPVGAPGRMGAQGEPGLAGYDGHKGIAGPLGPPGLKGEKGEQGEDGK 1341

Query: 253  S 253
            +
Sbjct: 1342 A 1342



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 94/204 (46%), Gaps = 52/204 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEM------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PG QG IGQ+GE G +G+       G+KG+RG+ G  G  G  G +G+ G++G  GP G 
Sbjct: 1180 PGEQGLIGQRGEPGLEGDSGPVGPDGLKGDRGDPGPDGERGEKGQEGLKGEDGLPGPPGI 1239

Query: 166  MGYPGPQGIPGDEGKR---GPKGDMGYPGR---------------------------IGL 195
             G  GP+G PG +G++   G KG  GYPG+                           +G 
Sbjct: 1240 TGIRGPEGKPGKQGEKGRTGAKGSKGYPGQLGEMGVPGDSGPPGTPGPKGSRGSLGPVGA 1299

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT----------------NG 239
             GR G  GEPGL G  G  G+ G  G  GL G+ G  G +G                  G
Sbjct: 1300 PGRMGAQGEPGLAGYDGHKGIAGPLGPPGLKGEKGEQGEDGKAEGPPGPPGDRGPMGDRG 1359

Query: 240  EKGMTGPRGNRGKSGINGVPGTPA 263
            ++G  G  G RG+ G+ G+ G P 
Sbjct: 1360 DRGEPGDPGYRGQEGVQGLRGKPG 1383



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 94/216 (43%), Gaps = 43/216 (19%)

Query: 88   LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
            L A     L+  +G      +  P G  G  G +G+ G  GE G KG+ G KG  G+ GP
Sbjct: 1177 LGAPGEQGLIGQRGEPGLEGDSGPVGPDGLKGDRGDPGPDGERGEKGQEGLKGEDGLPGP 1236

Query: 148  PGPQGIPGDE---GKRGPKGDMGYPGPQGIPGDEGK------------------RGPKGD 186
            PG  GI G E   GK+G KG  G  G +G PG  G+                  RG  G 
Sbjct: 1237 PGITGIRGPEGKPGKQGEKGRTGAKGSKGYPGQLGEMGVPGDSGPPGTPGPKGSRGSLGP 1296

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI--------------- 231
            +G PGR+G  G  GL G  G  GI G  G  G+ G+ G  G+DG                
Sbjct: 1297 VGAPGRMGAQGEPGLAGYDGHKGIAGPLGPPGLKGEKGEQGEDGKAEGPPGPPGDRGPMG 1356

Query: 232  -------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   PG  G  G++G+ G RG  G+ G+ G PG
Sbjct: 1357 DRGDRGEPGDPGYRGQEGVQGLRGKPGQQGLPGHPG 1392



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 85/205 (41%), Gaps = 63/205 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GP+G  G  G++G +G+ G         ERG  G PG  G  G  G PGD G+RGP 
Sbjct: 746 GLPGPVGDPGPKGSRGYIGIPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPP 805

Query: 164 G---------------------------DMGYPGPQG------------IPGDEGKRGPK 184
           G                            +GYPGP+G            + GD+G++G  
Sbjct: 806 GLDGNPGDLGLPGPPGVPGLLGDMGALGPLGYPGPKGMKGLMGGVGEPGLKGDKGEQGVP 865

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---------------DGLPGKD 229
           G  G PG  G  G  GLPG PG  G PG  G  G  G                 G PG +
Sbjct: 866 GVSGEPGFQGDKGSQGLPGVPGARGKPGPTGRVGDKGSLGFPGPPGPEGFPGDIGPPGDN 925

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  GT G  G +G+ GPRG  G  G
Sbjct: 926 GPEGTKGKPGARGLPGPRGQLGPEG 950



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 87/189 (46%), Gaps = 48/189 (25%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------- 144
             M+G      E   PGL+G  G++G  G  GE G +G++G +G PGV             
Sbjct: 842  GMKGLMGGVGE---PGLKGDKGEQGVPGVSGEPGFQGDKGSQGLPGVPGARGKPGPTGRV 898

Query: 145  --------------------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
                                +GPP         G  GP+G  G PG +G+PG  G+ GP+
Sbjct: 899  GDKGSLGFPGPPGPEGFPGDIGPP---------GDNGPEGTKGKPGARGLPGPRGQLGPE 949

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEK 241
            GD G  G  G  G +GLPG  G  G PG +G  G PG+ G P   G+ G+ G  G  GE 
Sbjct: 950  GDEGPMGPPGAPGVEGLPGRKGFPGRPGPDGSKGEPGEPGRPGPMGEQGLMGFIGLVGEP 1009

Query: 242  GMTGPRGNR 250
            G+ G +G+R
Sbjct: 1010 GIVGEKGDR 1018



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            +  PPG +G  G  G  G++GE G KG+    GE G PGV G  GP+G PGD G +G +G
Sbjct: 1504 QLGPPGKRGTEGGMGLPGSQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDTGFKGIQG 1563

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
              G PG  G  G  G  G +G  G PGR G  G  G
Sbjct: 1564 PRGPPGLMGKEGIIGPLGSQGPSGLPGRKGDKGSRG 1599


>gi|119631314|gb|EAX10909.1| collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV,
           autosomal dominant), isoform CRA_a [Homo sapiens]
          Length = 1127

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/143 (50%), Positives = 82/143 (57%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G  G  G KGEMG  G  G  G  G  GPPGP G  G  G RG  G+ G  G 
Sbjct: 86  PGAKGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGA 145

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G PG  G+RG  G  G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +GI
Sbjct: 146 KGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGI 205

Query: 232 PGTNGTNGEKGMTGPRGNRGKSG 254
           PG  G  GE+G  GP G RG +G
Sbjct: 206 PGEKGPAGERGAPGPAGPRGAAG 228



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 80/169 (47%), Gaps = 33/169 (19%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------ 161
           E   PGL+G  G  GE GA G MG +G  GE+G PG+   PG  G  G++G RG      
Sbjct: 16  ETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGL---PGAAGARGNDGARGSDGQPG 72

Query: 162 ---------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                      G  G  GP GI G  G +G  G  G PG  GL G  G PG  G +G PG
Sbjct: 73  PPGPPGTAGFPGSPGAKGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPG 132

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G PGK               NG KG  GPRG RG++GI GVPG 
Sbjct: 133 LRGGAGEPGK---------------NGAKGEPGPRGERGEAGIPGVPGA 166



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 66/127 (51%), Gaps = 18/127 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-------- 147
           L+  +G          PGL+G  G+ G+ GAKGE G +GERGE G PGV G         
Sbjct: 115 LMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDG 174

Query: 148 ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
               PG  G+PG  G+RG  G  G  GP GIPG+   +GP G+ G PG  G     G  G
Sbjct: 175 SPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGE---KGPAGERGAPGPAGP---RGAAG 228

Query: 204 EPGLDGI 210
           EPG DG+
Sbjct: 229 EPGRDGV 235



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 30/51 (58%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           PG QGP G KGE G +G  G+KG RG  G PG  G PGP G  G  G  GP
Sbjct: 746 PGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGP 796



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 56/145 (38%), Gaps = 57/145 (39%)

Query: 146 GPPGPQG---IPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRG----- 182
           GPPGP G    PG  G  GPKGD G PG +G               I G  G RG     
Sbjct: 564 GPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPP 623

Query: 183 -------------PKGDMGYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMD 217
                         KG+ G PG  GL G              G  GEPG          D
Sbjct: 624 GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPG---------RD 674

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKG 242
           G PG DGLPG+DG PG  G  GE G
Sbjct: 675 GNPGSDGLPGRDGSPGGKGDRGENG 699



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 21/112 (18%)

Query: 178 EGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           +G+ G KG+ G P   G  GL G +G PG  G  G PG  G  G+PG  G  G DG  G+
Sbjct: 8   DGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGS 67

Query: 235 N------------------GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           +                  G  G  G+ G  G +G+ G  G+PG P +   +
Sbjct: 68  DGQPGPPGPPGTAGFPGSPGAKGPPGINGSPGGKGEMGPAGIPGAPGLMGAR 119


>gi|449676568|ref|XP_002164888.2| PREDICTED: collagen alpha-2(I) chain-like [Hydra magnipapillata]
          Length = 1475

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 103/199 (51%), Gaps = 24/199 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP+G  G  GAKGE+G +GE+GE G  G  G  G  G  G EG RG KGD G PGP
Sbjct: 817  PGEPGPVGHPGSDGAKGELGARGEKGETGPAGGNGEAGQIGALGAEGGRGEKGDRGQPGP 876

Query: 172  ---QGIPGDE---GKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGK 222
               QG PG++   G+RGP G+ G  GR G  G+D   G PGE G  G PG NG  G PGK
Sbjct: 877  RGNQGSPGNDGPRGRRGPNGNPGPSGRPGPQGKDGPKGSPGETGHPGKPGENGAPGFPGK 936

Query: 223  DGL---PGKDGI------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            DG    PG+DGI            PG  G  G  G +G  G +G  G  G PG P    +
Sbjct: 937  DGRNGEPGEDGISGLPGDIGPVGLPGQPGPQGRIGASGFPGAQGTVGTKGEPGVPGKPGF 996

Query: 268  KRESCSLLPNSETSQLLIP 286
            K +  S+  N     + +P
Sbjct: 997  KGQKGSIGANGSPGPVGLP 1015



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 101/211 (47%), Gaps = 63/211 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G  GE G  G +G +G RGEKG  G  GP G QG PG++G RG +G  G PGP 
Sbjct: 842  GETGPAGGNGEAGQIGALGAEGGRGEKGDRGQPGPRGNQGSPGNDGPRGRRGPNGNPGPS 901

Query: 173  GIPGDEGKRGPKG---DMGYPGRIG---------LDGRDGLPGEPGLDGIPG-------- 212
            G PG +GK GPKG   + G+PG+ G          DGR+G PGE G+ G+PG        
Sbjct: 902  GRPGPQGKDGPKGSPGETGHPGKPGENGAPGFPGKDGRNGEPGEDGISGLPGDIGPVGLP 961

Query: 213  ----------------------RNGMDGIPGKDG------------------LP---GKD 229
                                    G  G+PGK G                  LP   GKD
Sbjct: 962  GQPGPQGRIGASGFPGAQGTVGTKGEPGVPGKPGFKGQKGSIGANGSPGPVGLPGKSGKD 1021

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PGT+G NGE G  GP+GN G+ G  G+PG
Sbjct: 1022 GAPGTDGKNGEPGDIGPKGNSGEKGFLGLPG 1052



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 100/212 (47%), Gaps = 33/212 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   QG+  +  E  P G +G  G++GE G +GE G+KG+ G  G  G+ GPPGPQG  G
Sbjct: 264 LDGPQGYKGNKGEQGPSGEKGSSGKEGEKGQEGENGLKGDTGPAGPRGLQGPPGPQGQMG 323

Query: 156 DEGKRGPKGDMGYPGPQ------GIPGDEGKRGPKGDMGYP------GRIGLDGRDGLPG 203
             G  GP G +G PGPQ      G PGD+G+RGPKG+ G        G  G  G+ G PG
Sbjct: 324 PTGLMGPIGSIGLPGPQGSAGLPGTPGDQGERGPKGETGATGPRGERGEQGERGKAGEPG 383

Query: 204 EPGLDGIPGRNGMDGI---------------------PGKDGLPGKDGIPGTNGTNGEKG 242
           + G  G  G  G DG                       G  GL G DG  G  G  G  G
Sbjct: 384 QKGSKGPLGSRGRDGFRGDKGSSGSPGSQGPRGLVGPRGHQGLQGSDGSIGEPGPRGALG 443

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
             GP+G +G  G+ G PG+P        + S+
Sbjct: 444 EQGPQGLQGPKGMTGDPGSPGSSGAPGPTGSV 475



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 94/185 (50%), Gaps = 24/185 (12%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------PGVVGP 147
           +  QG   ST     PG  G +G  G+ G+ G  G  G  G++GA         PG +GP
Sbjct: 520 IGQQGIKGSTGA---PGASGEMGASGDRGSPGPAGKPGTSGKQGARGIPGNDGRPGAMGP 576

Query: 148 ---------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                    PG QG+ G  G  G  G+ G PG +G  GD+G +G +G +G  G IGL G 
Sbjct: 577 MGERGLPGIPGLQGMKGSPGLSGATGENGRPGDKGTQGDKGLKGNQGQIGESGPIGLKGE 636

Query: 199 DGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            GL    G+PG  G PG  G  G PGKDG PG+ G  G +G  GE+G+ GP G +G  G 
Sbjct: 637 RGLAGPTGQPGHQGPPGALGESGAPGKDGDPGQPGDQGNDGRQGEQGLRGPPGVKGAPGP 696

Query: 256 NGVPG 260
            G PG
Sbjct: 697 RGAPG 701



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 82/148 (55%), Gaps = 6/148 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  GE GA GE G +G+RG+ G  G+ G     G PG  G+ G  GD G PGP G PG  
Sbjct: 500 GNPGEPGAPGEKGQRGDRGQIGQQGIKGS---TGAPGASGEMGASGDRGSPGPAGKPGTS 556

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           GK+G +   G PG  G  G  G  GE GL GIPG  GM G PG  G  G++G PG  GT 
Sbjct: 557 GKQGAR---GIPGNDGRPGAMGPMGERGLPGIPGLQGMKGSPGLSGATGENGRPGDKGTQ 613

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G+KG+ G +G  G+SG  G+ G   +  
Sbjct: 614 GDKGLKGNQGQIGESGPIGLKGERGLAG 641



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 86/161 (53%), Gaps = 12/161 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGY 168
           PG +GP G+KG+ GA+G  G  G+ G+ GA G  GP G QG PG+ G +G     G  G 
Sbjct: 739 PGSKGPEGEKGQHGARGAKGQTGDEGKDGAKGPDGPAGLQGPPGESGIKGEPGRSGSNGL 798

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG +G PG +G +GP G  G PG +G  G DG  GE G  G  G  G  G  G+ G  G 
Sbjct: 799 PGRRGNPGPQGNKGPAGQPGEPGPVGHPGSDGAKGELGARGEKGETGPAGGNGEAGQIGA 858

Query: 229 DGIPGTNGTNGEKGMTGPRGN---------RGKSGINGVPG 260
            G  G  G  G++G  GPRGN         RG+ G NG PG
Sbjct: 859 LGAEGGRGEKGDRGQPGPRGNQGSPGNDGPRGRRGPNGNPG 899



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 91/185 (49%), Gaps = 42/185 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPG------------D 156
           PG QG  G++GE G +G  GVKG  G +GAPG+VG PG Q   GIPG            D
Sbjct: 670 PGDQGNDGRQGEQGLRGPPGVKGAPGPRGAPGLVGEPGEQGSDGIPGYKGPSGPPGLPGD 729

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGI 210
            G+ G  G  G  GP+G  G  G RG KG  G  G+ G  G D      G PGE G+ G 
Sbjct: 730 NGQPGSSGLPGSKGPEGEKGQHGARGAKGQTGDEGKDGAKGPDGPAGLQGPPGESGIKGE 789

Query: 211 PGRNGMDGIPGKD---------------------GLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PGR+G +G+PG+                      G PG DG  G  G  GEKG TGP G 
Sbjct: 790 PGRSGSNGLPGRRGNPGPQGNKGPAGQPGEPGPVGHPGSDGAKGELGARGEKGETGPAGG 849

Query: 250 RGKSG 254
            G++G
Sbjct: 850 NGEAG 854



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 90/177 (50%), Gaps = 18/177 (10%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQG 152
           +    G   +T E   PG +G  G KG  G +G++G  G    +GE+G  G  G PG QG
Sbjct: 591 MKGSPGLSGATGENGRPGDKGTQGDKGLKGNQGQIGESGPIGLKGERGLAGPTGQPGHQG 650

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            PG  G+ G  G  G PG    PGD+G  G +G+ G  G  G+ G  G  G PGL G PG
Sbjct: 651 PPGALGESGAPGKDGDPG---QPGDQGNDGRQGEQGLRGPPGVKGAPGPRGAPGLVGEPG 707

Query: 213 RNGMDGIPG------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G DGIPG             +G PG  G+PG+ G  GEKG  G RG +G++G  G
Sbjct: 708 EQGSDGIPGYKGPSGPPGLPGDNGQPGSSGLPGSKGPEGEKGQHGARGAKGQTGDEG 764



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 79/146 (54%), Gaps = 9/146 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG +G KGE G  G+ G KG++G  GA G    PGP G+PG  GK       G PG 
Sbjct: 976  PGAQGTVGTKGEPGVPGKPGFKGQKGSIGANGS---PGPVGLPGKSGKD------GAPGT 1026

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G  G+ G  GPKG+ G  G +GL G  G PG  G  G  GR G  G  G DGL G DG 
Sbjct: 1027 DGKNGEPGDIGPKGNSGEKGFLGLPGVVGAPGLAGPTGAKGRAGGPGTRGIDGLKGADGP 1086

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G +G  G +GN+G++G  G
Sbjct: 1087 KGPKGNIGSRGAKGSKGNKGQNGEKG 1112



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 92/214 (42%), Gaps = 30/214 (14%)

Query: 83  NPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP 142
            P   +     I L   QG           G +GP G+ G  G +GE G +GERG+ G P
Sbjct: 323 GPTGLMGPIGSIGLPGPQGSAGLPGTPGDQGERGPKGETGATGPRGERGEQGERGKAGEP 382

Query: 143 GVVGPPGPQGIPGDEGKRGPK---------------GDMGYPGPQGIPGDEGKRGPKGDM 187
           G  G  GP G  G +G RG K               G  G+ G QG  G  G+ GP+G +
Sbjct: 383 GQKGSKGPLGSRGRDGFRGDKGSSGSPGSQGPRGLVGPRGHQGLQGSDGSIGEPGPRGAL 442

Query: 188 GYPGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDG------------LPGKDGIP 232
           G  G  GL G  G+   PG PG  G PG  G  G PG+DG            + G  G P
Sbjct: 443 GEQGPQGLQGPKGMTGDPGSPGSSGAPGPTGSVGKPGRDGNIGPAGPDGPPGISGIPGNP 502

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G  G  GEKG  G RG  G+ GI G  G P    
Sbjct: 503 GEPGAPGEKGQRGDRGQIGQQGIKGSTGAPGASG 536



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 80/166 (48%), Gaps = 21/166 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP GQ G  G  G +G  G  G+ G PG  G  G  G  G++G RGP G  G PGP+
Sbjct: 638 GLAGPTGQPGHQGPPGALGESGAPGKDGDPGQPGDQGNDGRQGEQGLRGPPGVKGAPGPR 697

Query: 173 GIPGDEGKRGPKG------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G PG  G+ G +G                  D G PG  GL G  G  GE G  G  G  
Sbjct: 698 GAPGLVGEPGEQGSDGIPGYKGPSGPPGLPGDNGQPGSSGLPGSKGPEGEKGQHGARGAK 757

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  GKDG  G DG  G  G  GE G+   +G  G+SG NG+PG
Sbjct: 758 GQTGDEGKDGAKGPDGPAGLQGPPGESGI---KGEPGRSGSNGLPG 800



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 88/197 (44%), Gaps = 39/197 (19%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG--------------------- 149
           P G QGP GQ G+ G  G  G  G+ GEKGA G  G PG                     
Sbjct: 192 PDGKQGPRGQYGDRGEPGPQGEPGDPGEKGAQGPAGSPGTNGRDGLNGERGDPGTIGPPG 251

Query: 150 ---------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
                          PQG  G++G++GP G+ G  G +G  G EG+ G KGD G  G  G
Sbjct: 252 EPGPEGLQGPSGLDGPQGYKGNKGEQGPSGEKGSSGKEGEKGQEGENGLKGDTGPAGPRG 311

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           L G  G  G+ G  G+ G  G  G+PG     GLPG  G  G  G  GE G TGPRG RG
Sbjct: 312 LQGPPGPQGQMGPTGLMGPIGSIGLPGPQGSAGLPGTPGDQGERGPKGETGATGPRGERG 371

Query: 252 KSGINGVPGTPAICAYK 268
           + G  G  G P     K
Sbjct: 372 EQGERGKAGEPGQKGSK 388



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 80/150 (53%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP+G  G+ G +G +G  G  G +G  G  G PG  G PG +G++G  G  G PGP
Sbjct: 952  PGDIGPVGLPGQPGPQGRIGASGFPGAQGTVGTKGEPGVPGKPGFKGQKGSIGANGSPGP 1011

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+PG  GK G  G  G  G  G  G  G  GE G  G+PG  G  G+ G  G  G+ G 
Sbjct: 1012 VGLPGKSGKDGAPGTDGKNGEPGDIGPKGNSGEKGFLGLPGVVGAPGLAGPTGAKGRAGG 1071

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PGT G +G KG  GP+G +G  G  G  G+
Sbjct: 1072 PGTRGIDGLKGADGPKGPKGNIGSRGAKGS 1101



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 78/150 (52%), Gaps = 12/150 (8%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP-- 171
           LQGP G  G  G KG  G +G  GEKG+ G       +G  G EG+ G KGD G  GP  
Sbjct: 258 LQGPSGLDGPQGYKGNKGEQGPSGEKGSSGK------EGEKGQEGENGLKGDTGPAGPRG 311

Query: 172 -QGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            QG PG +G+ GP G MG  G IGL    G  GLPG PG  G  G  G  G  G  G  G
Sbjct: 312 LQGPPGPQGQMGPTGLMGPIGSIGLPGPQGSAGLPGTPGDQGERGPKGETGATGPRGERG 371

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           + G  G  G  G+KG  GP G+RG+ G  G
Sbjct: 372 EQGERGKAGEPGQKGSKGPLGSRGRDGFRG 401



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 86/161 (53%), Gaps = 18/161 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQG------------IPGD 156
            PG  G  G+ G+IG KG  G KG  G  G   APG+ GP G +G            + G 
Sbjct: 1024 PGTDGKNGEPGDIGPKGNSGEKGFLGLPGVVGAPGLAGPTGAKGRAGGPGTRGIDGLKGA 1083

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGR 213
            +G +GPKG++G  G +G  G++G+ G KGD G+ G  G DG  GL    GE GLDG  G 
Sbjct: 1084 DGPKGPKGNIGSRGAKGSKGNKGQNGEKGDKGFRGLTGPDGIQGLMGKQGEMGLDGNKGS 1143

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G  G PG+DG+PG  G  G  G+ G  G RG+ G
Sbjct: 1144 IGHPGNQGPRGRPGRDGLPGEMGDTGVDGVKGAPGLRGQPG 1184



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 81/170 (47%), Gaps = 12/170 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------PK 163
           G  GP G  GE G +G  G KG  G+ G+PG  G PGP G  G  G+ G         P 
Sbjct: 434 GEPGPRGALGEQGPQGLQGPKGMTGDPGSPGSSGAPGPTGSVGKPGRDGNIGPAGPDGPP 493

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG  G PG  G++G +GD G  G+ G+ G  G PG  G  G  G  G  G  GK 
Sbjct: 494 GISGIPGNPGEPGAPGEKGQRGDRGQIGQQGIKGSTGAPGASGEMGASGDRGSPGPAGKP 553

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI---NGVPGTPAICAYKRE 270
           G  GK G  G  G +G  G  GP G RG  GI    G+ G+P +     E
Sbjct: 554 GTSGKQGARGIPGNDGRPGAMGPMGERGLPGIPGLQGMKGSPGLSGATGE 603



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/136 (43%), Positives = 67/136 (49%), Gaps = 24/136 (17%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----- 200
           GP GP G  G +G RG  GD G PGPQG PGD G++G +G  G PG  G DG +G     
Sbjct: 185 GPKGPMGPDGKQGPRGQYGDRGEPGPQGEPGDPGEKGAQGPAGSPGTNGRDGLNGERGDP 244

Query: 201 -------------LPGEPGLD---GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                        L G  GLD   G  G  G  G  G+ G  GK+G  G  G NG KG T
Sbjct: 245 GTIGPPGEPGPEGLQGPSGLDGPQGYKGNKGEQGPSGEKGSSGKEGEKGQEGENGLKGDT 304

Query: 245 GPRGNRGKSGINGVPG 260
           GP G R   G+ G PG
Sbjct: 305 GPAGPR---GLQGPPG 317



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 94/203 (46%), Gaps = 36/203 (17%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGV---------V 145
              QG   +  E   PG  G  GQKG IGA G    +G+ G+ G+ GAPG          +
Sbjct: 977  GAQGTVGTKGEPGVPGKPGFKGQKGSIGANGSPGPVGLPGKSGKDGAPGTDGKNGEPGDI 1036

Query: 146  GP------------PGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYP 190
            GP            PG  G PG  G  G KG  G PG +GI    G +G +GPKG++G  
Sbjct: 1037 GPKGNSGEKGFLGLPGVVGAPGLAGPTGAKGRAGGPGTRGIDGLKGADGPKGPKGNIGSR 1096

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G  G  G  GE G  G  G  G DGI G  G  G+ G+ G  G+ G  G  GPRG  
Sbjct: 1097 GAKGSKGNKGQNGEKGDKGFRGLTGPDGIQGLMGKQGEMGLDGNKGSIGHPGNQGPRGRP 1156

Query: 251  GK---------SGINGVPGTPAI 264
            G+         +G++GV G P +
Sbjct: 1157 GRDGLPGEMGDTGVDGVKGAPGL 1179



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 9/105 (8%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMG 167
            P G +G IG +G  G+KG  G  GE+G+KG  G+ GP G QG+ G +G+ G    KG +G
Sbjct: 1086 PKGPKGNIGSRGAKGSKGNKGQNGEKGDKGFRGLTGPDGIQGLMGKQGEMGLDGNKGSIG 1145

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            +      PG++G RG  G  G PG +G  G DG+ G PGL G PG
Sbjct: 1146 H------PGNQGPRGRPGRDGLPGEMGDTGVDGVKGAPGLRGQPG 1184



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
            GL GP G +G +G +GEMG+ G +G  G PG  GP   PG  G+PG+ G  G  G  G P
Sbjct: 1118 GLTGPDGIQGLMGKQGEMGLDGNKGSIGHPGNQGPRGRPGRDGLPGEMGDTGVDGVKGAP 1177

Query: 170  GPQGIPGDE 178
            G +G PGD+
Sbjct: 1178 GLRGQPGDD 1186


>gi|3510535|gb|AAC33527.1| collagen type IX alpha I chain, long form [Homo sapiens]
          Length = 921

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 106/189 (56%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+RGP      KGD G  G +GIPG  G   PKGD G PG
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG---PKGDTGLPG 541

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              +DGRDG+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G
Sbjct: 542 ---VDGRDGIPGMPGTKGEPGKPGPPGDAGLHGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 599 QMGNSGKPG 607



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA G+ G P            GPKGD G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLHGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 599 QMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPG 640



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 73/140 (52%), Gaps = 6/140 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 185 GDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GD G  G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDT 537

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G+    G  G+ GI G+PGT
Sbjct: 538 GLP---GVDGRDGIPGMPGT 554



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 532



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G +G  GA+G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 496 GLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 555

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG  G PG+ G  G  G PG+ G  G  
Sbjct: 556 GEPGKPGPPGDAGLHGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEV 615

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G  G+PG  G  G  G PG  G
Sbjct: 616 GPRGPRGLPGSRGELGPVGSPGLPG 640



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 83/187 (44%), Gaps = 42/187 (22%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G  G  G  G KG  GEKG+ G  G PG  G  G  G++GP G++G  GP+G+PG  
Sbjct: 568 GLHGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPRGLPGSR 627

Query: 179 GKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRNGMD--- 217
           G+ GP G  G PG+                   G+ G  G+ GEPG  G  G +G +   
Sbjct: 628 GELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEA 687

Query: 218 ---------GIPGKDGLPGKDGIPGTNGTNGEKGM------------TGPRGNRGKSGIN 256
                    G+PG  G  G  G PG  G  G +G+             G +G +G +G+ 
Sbjct: 688 GERGELGDIGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLP 747

Query: 257 GVPGTPA 263
           GV G P 
Sbjct: 748 GVQGPPG 754



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 76/179 (42%), Gaps = 60/179 (33%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   +MG  G+ G++G PG VGP GP+G+PG  G+ GP G  G 
Sbjct: 579 PGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGL 638

Query: 169 PGP------------------------QGIPGDEGKRGPKG---------------DMGY 189
           PG                         +G+ G+ G +G +G               D+G 
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGL 698

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
           P   G  G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 P---GPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 83/197 (42%), Gaps = 60/197 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGPQGIPGD 156
           PGL GP G  G  G  G  G+ G               + G  G PGV G PG +G+ G+
Sbjct: 528 PGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLHGLPGVPGIPGAKGVAGE 587

Query: 157 EG------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP----- 205
           +G      K G  G+ G PG QG PG+ G RGP+G  G  G +G  G  GLPG+      
Sbjct: 588 KGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPGKLGSLGS 647

Query: 206 -------------------GLDGIPGRNGMDGIPGKD------------GLPGKDGIPGT 234
                              G+ G PG  G  G  G++            GLPG     G+
Sbjct: 648 PGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPK---GS 704

Query: 235 NGTNGEKGMTGPRGNRG 251
            G  GE G+ GP G+RG
Sbjct: 705 AGNPGEPGLRGPEGSRG 721



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 39/69 (56%), Gaps = 7/69 (10%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--DGLPGEPGLDGIP-----GRNGM 216
           G  G PG +G PG  G RGPKGD+G  G  G  GR  +GLPG  GL G P     G+NG 
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGKNGR 873

Query: 217 DGIPGKDGL 225
           DG  G  GL
Sbjct: 874 DGERGPPGL 882


>gi|348531064|ref|XP_003453030.1| PREDICTED: collagen alpha-1(X) chain-like isoform 2 [Oreochromis
           niloticus]
          Length = 656

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/165 (47%), Positives = 93/165 (56%), Gaps = 10/165 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRGPKGDMG 167
           G  G  G++G+ GA G MG +G  G  G+PG      VG PGP GIPG  G RG  G  G
Sbjct: 101 GAPGKPGERGQPGATGPMGHRGAPGTPGSPGPSGLSAVGKPGPSGIPGAMGPRGEPGLKG 160

Query: 168 YPGPQGIPGDEGKR--GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +PG  G+PG +G+R  G  G  G  G +G  G  G+PG+PG+ G PG  G  G PGK G 
Sbjct: 161 HPGIPGVPGPKGERGIGIPGVQGPAGPVGPMGPSGMPGKPGI-GKPGATGYPGEPGKPGE 219

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNR--GKSGINGVPGTPAICAYK 268
           PG+DG PG  G +G KG TGP G    GK G NG PG P     K
Sbjct: 220 PGRDGSPGPMGVSGPKGHTGPPGTGAPGKPGQNGTPGMPGPMGVK 264



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 78/162 (48%), Gaps = 20/162 (12%)

Query: 113 GLQGPIGQKGE-----IGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKG 164
           G QGP GQ G      +G  GE G+ G RG  G+PG  G    PGP G  G  G  GP G
Sbjct: 265 GPQGPAGQPGSPGMPGVGKTGEPGIPGSRGAPGSPGTTGQKGEPGPTGFTGQPGATGPMG 324

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGY------------PGRIGLDGRDGLPGEPGLDGIPG 212
             G  G +G  G+ G  GPKGD+G              G  G  G+ G PG  G  GIPG
Sbjct: 325 PAGPQGARGFQGEAGPVGPKGDIGMVGAPGPRGTKGEQGAQGFTGKPGTPGAVGPPGIPG 384

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            NG  G  G  G  G  G+PG NG  G KG TG  G  GKSG
Sbjct: 385 HNGAQGPKGSQGHAGAPGLPGINGAQGPKGHTGAPGAPGKSG 426



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 87/182 (47%), Gaps = 14/182 (7%)

Query: 112 PGLQGPIGQKGEIGAKG-----EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           PG+QGP G  G +G  G      +G  G  G  G PG  G PG  G PG  G  GPKG  
Sbjct: 179 PGVQGPAGPVGPMGPSGMPGKPGIGKPGATGYPGEPGKPGEPGRDGSPGPMGVSGPKGHT 238

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG--RNGMDGIPGKDG 224
           G PG  G PG  G+ G     G PG +G+ G  G  G+PG  G+PG  + G  GIPG  G
Sbjct: 239 GPPG-TGAPGKPGQNG---TPGMPGPMGVKGPQGPAGQPGSPGMPGVGKTGEPGIPGSRG 294

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLL 284
            PG    PGT G  GE G TG  G  G +G  G  G      ++ E+  + P  +   + 
Sbjct: 295 APGS---PGTTGQKGEPGPTGFTGQPGATGPMGPAGPQGARGFQGEAGPVGPKGDIGMVG 351

Query: 285 IP 286
            P
Sbjct: 352 AP 353



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 54/96 (56%), Gaps = 12/96 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGA---------PGVVGPPGPQGIPGDEGKRGPK 163
           G  GP+G KG+IG  G  G +G +GE+GA         PG VGPPG   IPG  G +GPK
Sbjct: 336 GEAGPVGPKGDIGMVGAPGPRGTKGEQGAQGFTGKPGTPGAVGPPG---IPGHNGAQGPK 392

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G  G+ G  G+PG  G +GPKG  G PG  G  G  
Sbjct: 393 GSQGHAGAPGLPGINGAQGPKGHTGAPGAPGKSGES 428



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 65/122 (53%), Gaps = 15/122 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG  GP+G  G  GA+G  G  G  G KG  G+VG PGP+G  G++G +G  G  G PG 
Sbjct: 317 PGATGPMGPAGPQGARGFQGEAGPVGPKGDIGMVGAPGPRGTKGEQGAQGFTGKPGTPGA 376

Query: 171 --PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             P GIPG  G +GPKG  G+          G PG PG++G  G  G  G P   G PGK
Sbjct: 377 VGPPGIPGHNGAQGPKGSQGH---------AGAPGLPGINGAQGPKGHTGAP---GAPGK 424

Query: 229 DG 230
            G
Sbjct: 425 SG 426



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 77/174 (44%), Gaps = 22/174 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP-----QGIPGDEGKRGPKGDM 166
           PG  G  G+ G  G+ G MGV G +G  G PG   P  P      G+PG  G +GP+G  
Sbjct: 211 PGEPGKPGEPGRDGSPGPMGVSGPKGHTGPPGTGAPGKPGQNGTPGMPGPMGVKGPQGPA 270

Query: 167 GYPGPQGIPG--DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G PG  G+PG    G+ G  G  G PG  G  G+ G PG  G  G PG  G  G  G  G
Sbjct: 271 GQPGSPGMPGVGKTGEPGIPGSRGAPGSPGTTGQKGEPGPTGFTGQPGATGPMGPAGPQG 330

Query: 225 L-----------PGKD----GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                       P  D    G PG  GT GE+G  G  G  G  G  G PG P 
Sbjct: 331 ARGFQGEAGPVGPKGDIGMVGAPGPRGTKGEQGAQGFTGKPGTPGAVGPPGIPG 384



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/134 (41%), Positives = 62/134 (46%), Gaps = 25/134 (18%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           + G PGV G PG  G PG  G+RG                 G  GP G  G PG  G  G
Sbjct: 87  QAGKPGVPGSPGKSGAPGKPGERG---------------QPGATGPMGHRGAPGTPGSPG 131

Query: 198 RDGLP--GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM-----TGPRGNR 250
             GL   G+PG  GIPG  G  G PG  G PG   IPG  G  GE+G+      GP G  
Sbjct: 132 PSGLSAVGKPGPSGIPGAMGPRGEPGLKGHPG---IPGVPGPKGERGIGIPGVQGPAGPV 188

Query: 251 GKSGINGVPGTPAI 264
           G  G +G+PG P I
Sbjct: 189 GPMGPSGMPGKPGI 202



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 32/61 (52%)

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G PG  G PGK G PG  G  G+ G TGP G+RG  G  G PG   + A  +   S +P 
Sbjct: 89  GKPGVPGSPGKSGAPGKPGERGQPGATGPMGHRGAPGTPGSPGPSGLSAVGKPGPSGIPG 148

Query: 278 S 278
           +
Sbjct: 149 A 149


>gi|297678468|ref|XP_002817092.1| PREDICTED: collagen alpha-1(IX) chain isoform 1 [Pongo abelii]
          Length = 921

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 106/189 (56%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGI---PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+   PGD+G+R      GPKGD G  G +GIPG     GPKGD G P 
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP---GPKGDTGLP- 540

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G+DGRDG+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G
Sbjct: 541 --GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 599 QMGNSGKPG 607



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA G+ G P            GPKGD G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GP+   G+RG+ G  G PG P 
Sbjct: 599 QMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 640



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 73/140 (52%), Gaps = 6/140 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 185 GDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GD G  G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDT 537

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G+    G  G+ GI G+PGT
Sbjct: 538 GLP---GVDGRDGIPGMPGT 554



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 532



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G +G  GA+G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 496 GLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 555

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG  G PG+ G  G  G PG+ G  G  
Sbjct: 556 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEV 615

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G  G+PG  G  G  G PG  G
Sbjct: 616 GPRGPQGLPGSRGELGPVGSPGLPG 640



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 87/193 (45%), Gaps = 48/193 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GPQ
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 621

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PG+                   G  G  G+ GEPG  G  G +
Sbjct: 622 GLPGSRGELGPVGSPGLPGKPGSLGSPGLPGLPGPPGLPGTKGDRGVVGEPGPKGEQGAS 681

Query: 215 GMD------------GIPGKDGLPGKDGIPGTNGTNGEKGM------------TGPRGNR 250
           G +            G+PG  G  G  G PG  G  G +G+             G +G +
Sbjct: 682 GEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQ 741

Query: 251 GKSGINGVPGTPA 263
           G +G+ GV G P 
Sbjct: 742 GATGLPGVQGPPG 754



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 76/179 (42%), Gaps = 60/179 (33%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   +MG  G+ G++G PG VGP GPQG+PG  G+ GP G  G 
Sbjct: 579 PGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGL 638

Query: 169 PGP------------------------QGIPGDEGKRGPKG---------------DMGY 189
           PG                         +G+ G+ G +G +G               D+G 
Sbjct: 639 PGKPGSLGSPGLPGLPGPPGLPGTKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGL 698

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
           P   G  G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 P---GPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 85/197 (43%), Gaps = 60/197 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGPQGIPGD 156
           PGL GP G  G  G  G  G+ G               + G +G PGV G PG +G+ G+
Sbjct: 528 PGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGE 587

Query: 157 EG------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP----- 205
           +G      K G  G+ G PG QG PG+ G RGP+G  G  G +G  G  GLPG+P     
Sbjct: 588 KGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKPGSLGS 647

Query: 206 -------------------GLDGIPGRNGMDGIPGKD------------GLPGKDGIPGT 234
                              G+ G PG  G  G  G++            GLPG     G+
Sbjct: 648 PGLPGLPGPPGLPGTKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPK---GS 704

Query: 235 NGTNGEKGMTGPRGNRG 251
            G  GE G+ GP G+RG
Sbjct: 705 AGNPGEPGLRGPEGSRG 721



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 38/69 (55%), Gaps = 7/69 (10%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIP-----GRNGM 216
           G  G PG +G PG  G RGPKGD+G  G  G  GR   GLPG  GL G P     GRNG 
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAIGLPGDPGPASYGRNGR 873

Query: 217 DGIPGKDGL 225
           DG  G  G+
Sbjct: 874 DGERGPPGV 882


>gi|345801731|ref|XP_537089.3| PREDICTED: collagen alpha-1(XXIV) chain [Canis lupus familiaris]
          Length = 1709

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 101/207 (48%), Gaps = 49/207 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDE------------ 157
            G +G +G  G IG  GE G+ G RG +G PG+ G PGP+G    PG++            
Sbjct: 1144 GTRGAVGHLGLIGPDGEPGIPGYRGHQGQPGLPGLPGPKGEKGYPGEDSTVLGPPGPRGE 1203

Query: 158  ----------------------GKRGPKGDMGYPGPQGIPGDEGKRG---------PKGD 186
                                  G  GP+G  G  GP G PGD+G++G         PKG 
Sbjct: 1204 PGIIGEQGERGEPGEEGYKGHVGLPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGK 1263

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---KDGLPGKDGIPGTNGTNGEKGM 243
             G PG  G  G  GLPG PG  GI G +G DG+ G   K GLPG  G+PGT G+ G  G+
Sbjct: 1264 KGAPGPSGKPGIPGLPGLPGPKGIQGYHGADGLSGNSGKAGLPGNQGVPGTRGSPGRTGL 1323

Query: 244  TGPRGNRGKSGINGVPGTPAICAYKRE 270
            TG  G RG  G +G+PG+P +   K E
Sbjct: 1324 TGSPGPRGAKGSSGLPGSPGVPGPKGE 1350



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 93/167 (55%), Gaps = 6/167 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG   P G  GIPG 
Sbjct: 1225 VGLPGPRGATGQQGPPGEPG---DQGEQGLKGERGSEGPKGKKGAPG---PSGKPGIPGL 1278

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G  GPKG  GY G  G+ G+ GK G  G+ G PG  G  GR GL G PG  G  G +G+
Sbjct: 1279 PGLPGPKGIQGYHGADGLSGNSGKAGLPGNQGVPGTRGSPGRTGLTGSPGPRGAKGSSGL 1338

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G PG  G  G+ G+PG  G  G++G  G +G++G  G  G+ G P 
Sbjct: 1339 PGSPGVPGPKGEQGLPGEPGIQGKRGHRGAQGDQGPCGEPGLKGQPG 1385



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 97/180 (53%), Gaps = 15/180 (8%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPG 149
            L+  QG   +  E    G +GP G  G+ G  GE GV+G+ G +G PG      + G PG
Sbjct: 929  LLGEQGIQGAKGEKGDQGKRGPYGLIGKTGNPGERGVQGKPGLQGPPGSTGERGLEGEPG 988

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            P+G+ GD    GP G+MG  GP GI   EG+ G  G+ G  G +G  G  G+ GEPGL G
Sbjct: 989  PRGLQGDA---GPPGEMGAEGPSGI---EGESGLPGEPGAKGNVGPAGNVGVAGEPGLRG 1042

Query: 210  IPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             PG  G +G+ GKDGL   PG  G+ G +G  GE G+ G  G  G+ G+ G PG   I  
Sbjct: 1043 EPGAPGEEGLQGKDGLKGNPGGRGLSGEDGEKGETGLPGATGPLGRPGLMGPPGPEGIVG 1102



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 96/175 (54%), Gaps = 27/175 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +G+ G KG  G+ G RGE G PG  G  G +G PG +G  GP+G+   PGP+
Sbjct: 553 GLMGPPGMQGDKGLKGYPGLPGPRGEPGIPGFTGNIGSRGYPGRQGLAGPEGN---PGPK 609

Query: 173 GI------PGDEGKRGPKGDMGYP---GRIGLDGRDGLPGE------PGLDGIPGRNGMD 217
           G+      PG+ G+ GP+G+ G P   G+ GL GR G PG+       G DG PG  G  
Sbjct: 610 GVRGFIGSPGEVGQLGPEGERGVPGIRGKKGLKGRQGFPGDFGDRGPAGPDGSPGLVGSI 669

Query: 218 GIPGKDGLPGK---------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G PG  GL G           GIPG  G +G KG+ G +G++G+ GI G PG P 
Sbjct: 670 GPPGFPGLRGNIGPIGPLGPSGIPGPMGLSGNKGLPGIKGDKGEQGIIGEPGEPG 724



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 95/199 (47%), Gaps = 42/199 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---------PGDEGKRGP 162
            PGLQGP G  GE G +GE G +G +G+ G PG +G  GP GI         PG +G  GP
Sbjct: 969  PGLQGPPGSTGERGLEGEPGPRGLQGDAGPPGEMGAEGPSGIEGESGLPGEPGAKGNVGP 1028

Query: 163  KGDMGYPGPQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------ 204
             G++G  G  G+      PG+EG +G  G  G PG  GL G DG  GE            
Sbjct: 1029 AGNVGVAGEPGLRGEPGAPGEEGLQGKDGLKGNPGGRGLSGEDGEKGETGLPGATGPLGR 1088

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKD---------------GIPGTNGTNGEKGMTGPRGN 249
            PGL G PG  G+ G PG+ G PGK                G PG  G +G KG  G RG 
Sbjct: 1089 PGLMGPPGPEGIVGSPGQRGRPGKKGDKGQIGPTGEIGNRGAPGQIGESGPKGARGTRGA 1148

Query: 250  RGKSGINGVPGTPAICAYK 268
             G  G+ G  G P I  Y+
Sbjct: 1149 VGHLGLIGPDGEPGIPGYR 1167



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 85/165 (51%), Gaps = 21/165 (12%)

Query: 127  KGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG---IPGDEGK 180
            KG +G+ G RG   ++G PG  G  G QG+ G+ G  GPKG  G PGP G   IPG  G 
Sbjct: 1222 KGHVGLPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGAPGPSGKPGIPGLPGL 1281

Query: 181  RGPKGDMGYPGRIGLDG---RDGLPGE---PGLDGIPGRNGMDGIP------GKDGLPGK 228
             GPKG  GY G  GL G   + GLPG    PG  G PGR G+ G P      G  GLPG 
Sbjct: 1282 PGPKGIQGYHGADGLSGNSGKAGLPGNQGVPGTRGSPGRTGLTGSPGPRGAKGSSGLPGS 1341

Query: 229  DGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G+PG  G     GE G+ G RG+RG  G  G  G P +     E
Sbjct: 1342 PGVPGPKGEQGLPGEPGIQGKRGHRGAQGDQGPCGEPGLKGQPGE 1386



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 92/179 (51%), Gaps = 33/179 (18%)

Query: 116  GPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGI------------------P 154
            G IG+ G IG  GE+G+ G   E+GE+G+PG +GP G +G+                  P
Sbjct: 844  GKIGETGPIGLPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGDPGPIGPLGLP 903

Query: 155  GDEGKRGP------KGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  G RGP      KG  G  GP G+ G+   +G +G KGD G  G  GL G+ G PGE 
Sbjct: 904  GHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPYGLIGKTGNPGER 963

Query: 206  GLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+ G PG  G  G  G+ GL   PG  G+ G  G  GE G  GP G  G+SG+ G PG 
Sbjct: 964  GVQGKPGLQGPPGSTGERGLEGEPGPRGLQGDAGPPGEMGAEGPSGIEGESGLPGEPGA 1022



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G      V GE+G +G  G++GPPG QG       +G KG  G PGP
Sbjct: 522 PGLPGPKGPKGDPGFSPGQAVPGEKGNQGLSGLMGPPGMQG------DKGLKGYPGLPGP 575

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G PG  G  G  G  GYPGR GL G +G PG  G+ G  G  G  G  G +G  G  GI
Sbjct: 576 RGEPGIPGFTGNIGSRGYPGRQGLAGPEGNPGPKGVRGFIGSPGEVGQLGPEGERGVPGI 635

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G +G  G  G+RG +G +G PG
Sbjct: 636 RGKKGLKGRQGFPGDFGDRGPAGPDGSPG 664



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 83/165 (50%), Gaps = 15/165 (9%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
           +  +G+        P G  GP G +G IG+ GE+G  G  GE+G PG+ G  G    QG 
Sbjct: 588 IGSRGYPGRQGLAGPEGNPGPKGVRGFIGSPGEVGQLGPEGERGVPGIRGKKGLKGRQGF 647

Query: 154 PGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLPGE 204
           PGD G RGP G  G P      GP G PG  G  GP G +   G PG +GL G  GL   
Sbjct: 648 PGDFGDRGPAGPDGSPGLVGSIGPPGFPGLRGNIGPIGPLGPSGIPGPMGLSGNKGL--- 704

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG+ G  G  G+ G PG+ G PG  G  G +G  G +G  GP G 
Sbjct: 705 PGIKGDKGEQGIIGEPGEPGYPGDKGAVGVSGPPGMRGKPGPSGQ 749



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 83/158 (52%), Gaps = 9/158 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGY 168
           PG  G IG +G  G +G  G +G  G KG  G +G PG  G  G EG+RG    +G  G 
Sbjct: 582 PGFTGNIGSRGYPGRQGLAGPEGNPGPKGVRGFIGSPGEVGQLGPEGERGVPGIRGKKGL 641

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G QG PGD G RGP G  G PG +G  G  G PG  G  G  G  G  GIPG  GL G 
Sbjct: 642 KGRQGFPGDFGDRGPAGPDGSPGLVGSIGPPGFPGLRGNIGPIGPLGPSGIPGPMGLSGN 701

Query: 229 DGIPGTNGTNGEKGMTGP------RGNRGKSGINGVPG 260
            G+PG  G  GE+G+ G        G++G  G++G PG
Sbjct: 702 KGLPGIKGDKGEQGIIGEPGEPGYPGDKGAVGVSGPPG 739



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 103/231 (44%), Gaps = 82/231 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG---------ERGEKGA------------PGVVGPPGP 150
            PGL+G  G  GE G +G+ G+KG         E GEKG             PG++GPPGP
Sbjct: 1038 PGLRGEPGAPGEEGLQGKDGLKGNPGGRGLSGEDGEKGETGLPGATGPLGRPGLMGPPGP 1097

Query: 151  QGI---PGDEGKRGPKGDMGYPGP------QGIPGDEGKRGPK------GDMGYPGRIGL 195
            +GI   PG  G+ G KGD G  GP      +G PG  G+ GPK      G +G+ G IG 
Sbjct: 1098 EGIVGSPGQRGRPGKKGDKGQIGPTGEIGNRGAPGQIGESGPKGARGTRGAVGHLGLIGP 1157

Query: 196  DGRDGLP------GEPGLDGIPGRNGMDGIPGKD-------------------------- 223
            DG  G+P      G+PGL G+PG  G  G PG+D                          
Sbjct: 1158 DGEPGIPGYRGHQGQPGLPGLPGPKGEKGYPGEDSTVLGPPGPRGEPGIIGEQGERGEPG 1217

Query: 224  --------GLP------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                    GLP      G+ G PG  G  GE+G+ G RG+ G  G  G PG
Sbjct: 1218 EEGYKGHVGLPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGAPG 1268



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 86/175 (49%), Gaps = 27/175 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYP 169
           G +G  GQKG  G  G  G+KGE G++G  G +G  GP G+PG+    G  G KG+ G P
Sbjct: 814 GPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPIGLPGEVGITGSIGEKGERGSP 873

Query: 170 GPQG------------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GP G                        +PG  G RGP G  G  G+ G  G DGL GE 
Sbjct: 874 GPLGPQGEKGVMGYPGPPGDPGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQ 933

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G  G  G  G  G  GL GK G PG  G  G+ G+ GP G+ G+ G+ G PG
Sbjct: 934 GIQGAKGEKGDQGKRGPYGLIGKTGNPGERGVQGKPGLQGPPGSTGERGLEGEPG 988



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 96/212 (45%), Gaps = 45/212 (21%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            V  QG      E  P GL G +G  G IG KGE G  G  G +G  GV+           
Sbjct: 837  VGDQGNIGKIGETGPIGLPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGDPGP 896

Query: 146  -------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG---DEGKRGPKG---D 186
                         GPPG QG  G  G RGP G +G  G QG  G   D+GKRGP G    
Sbjct: 897  IGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPYGLIGK 956

Query: 187  MGYPGRIGLDGRDGLPGEPG------LDGIPGRNGMDG---IPGKDGLPGKDGIPGTNGT 237
             G PG  G+ G+ GL G PG      L+G PG  G+ G    PG+ G  G  GI G +G 
Sbjct: 957  TGNPGERGVQGKPGLQGPPGSTGERGLEGEPGPRGLQGDAGPPGEMGAEGPSGIEGESGL 1016

Query: 238  NGE---KGMTGPRGN---RGKSGINGVPGTPA 263
             GE   KG  GP GN    G+ G+ G PG P 
Sbjct: 1017 PGEPGAKGNVGPAGNVGVAGEPGLRGEPGAPG 1048



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 82/165 (49%), Gaps = 9/165 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGDM 166
            G  G  G  G+ G  G  GV G RG  G  G+ G PGP+G      +PG  G  GPKG+ 
Sbjct: 1292 GADGLSGNSGKAGLPGNQGVPGTRGSPGRTGLTGSPGPRGAKGSSGLPGSPGVPGPKGEQ 1351

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G PG  GI G  G RG +GD G  G  GL G+   PGE G+ G+ G  G  G  G +G  
Sbjct: 1352 GLPGEPGIQGKRGHRGAQGDQGPCGEPGLKGQ---PGEHGVQGLTGFQGFPGPRGPEGDA 1408

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  GI G  G  G++G TGP G  G  G  G  G      ++ E+
Sbjct: 1409 GIVGISGPKGPIGQRGNTGPFGKEGIIGPTGRTGPRGEKGFRGEA 1453



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 86/163 (52%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ G  G +GE GA GE G++G+ G KG PG  G  G  G  G+ G  G  G +G PG  
Sbjct: 1033 GVAGEPGLRGEPGAPGEEGLQGKDGLKGNPGGRGLSGEDGEKGETGLPGATGPLGRPGLM 1092

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G PG EG  G  G  G PG+ G  G+ G  GE G  G PG+ G  G  G  G  G  G  
Sbjct: 1093 GPPGPEGIVGSPGQRGRPGKKGDKGQIGPTGEIGNRGAPGQIGESGPKGARGTRGAVGHL 1152

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
            G  G +GE G+ G RG++G+ G+ G+PG      Y  E  ++L
Sbjct: 1153 GLIGPDGEPGIPGYRGHQGQPGLPGLPGPKGEKGYPGEDSTVL 1195



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 72/132 (54%), Gaps = 12/132 (9%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---G 194
           ++G  G+ GP G  G+PG  G +GPKGD G+   Q +PG++G +G  G MG PG     G
Sbjct: 506 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAVPGEKGNQGLSGLMGPPGMQGDKG 565

Query: 195 LDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------GEKGMTG 245
           L G  GLP   GEPG+ G  G  G  G PG+ GL G +G PG  G        GE G  G
Sbjct: 566 LKGYPGLPGPRGEPGIPGFTGNIGSRGYPGRQGLAGPEGNPGPKGVRGFIGSPGEVGQLG 625

Query: 246 PRGNRGKSGING 257
           P G RG  GI G
Sbjct: 626 PEGERGVPGIRG 637



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 87/179 (48%), Gaps = 39/179 (21%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD- 177
           G++G IG  GE+G +G+ G+KG     G PGP+G+ G+ G +G  G +G  GP G+PG+ 
Sbjct: 802 GEEGPIGPFGELGPRGKPGQKG---YAGEPGPEGLKGEVGDQGNIGKIGETGPIGLPGEV 858

Query: 178 --EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPGRN--- 214
              G  G KG+ G PG +G  G  G                  LPG  G  G PG     
Sbjct: 859 GITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGDPGPIGPLGLPGHVGARGPPGSQGPK 918

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGINGVPGT 261
           G  G  G DGL G+ GI G  G  G++G  GP            RG +GK G+ G PG+
Sbjct: 919 GQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPYGLIGKTGNPGERGVQGKPGLQGPPGS 977



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 80/159 (50%), Gaps = 20/159 (12%)

Query: 104  NSTKEYCP-----PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD-- 156
            NS K   P     PG +G  G+ G  G+ G  G KG  G  G+PGV GP G QG+PG+  
Sbjct: 1299 NSGKAGLPGNQGVPGTRGSPGRTGLTGSPGPRGAKGSSGLPGSPGVPGPKGEQGLPGEPG 1358

Query: 157  ----EGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
                 G RG +GD G    PG +G PG+ G +G  G  G+PG  G +      G+ G+ G
Sbjct: 1359 IQGKRGHRGAQGDQGPCGEPGLKGQPGEHGVQGLTGFQGFPGPRGPE------GDAGIVG 1412

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            I G  G  G  G  G  GK+GI G  G  G +G  G RG
Sbjct: 1413 ISGPKGPIGQRGNTGPFGKEGIIGPTGRTGPRGEKGFRG 1451



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 62/114 (54%), Gaps = 9/114 (7%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPG 212
           KRGP+G  G  G  G+PG  G +GPKGD G+      PG  G  G  GL G PG+ G  G
Sbjct: 506 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQAVPGEKGNQGLSGLMGPPGMQGDKG 565

Query: 213 RNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G+P   G+ G+PG  G  G+ G  G +G+ GP GN G  G+ G  G+P 
Sbjct: 566 LKGYPGLPGPRGEPGIPGFTGNIGSRGYPGRQGLAGPEGNPGPKGVRGFIGSPG 619



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 91/204 (44%), Gaps = 45/204 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG---Y 168
           PG++G  G KG  G  G+ G +G  G  G+PG+VG  GP G PG  G  GP G +G    
Sbjct: 633 PGIRGKKGLKGRQGFPGDFGDRGPAGPDGSPGLVGSIGPPGFPGLRGNIGPIGPLGPSGI 692

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------PGLDG---------- 209
           PGP G+ G++G  G KGD G  G IG  G  G PG+         PG+ G          
Sbjct: 693 PGPMGLSGNKGLPGIKGDKGEQGIIGEPGEPGYPGDKGAVGVSGPPGMRGKPGPSGQVGD 752

Query: 210 --------------------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                               IPG+NG +G+ G  G  G  G PG  G  GE+G  GP G 
Sbjct: 753 PGPQGPCGPPGPEGFPGDIGIPGQNGPEGLKGLLGNRGPPGPPGLKGLQGEEGPIGPFGE 812

Query: 250 ---RGKSGINGVPGTPAICAYKRE 270
              RGK G  G  G P     K E
Sbjct: 813 LGPRGKPGQKGYAGEPGPEGLKGE 836



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 81/177 (45%), Gaps = 27/177 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G KG +G +G  G  G +G +G  G +GP          G+ GP+G  G  G 
Sbjct: 774 PGQNGPEGLKGLLGNRGPPGPPGLKGLQGEEGPIGP---------FGELGPRGKPGQKGY 824

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G PG EG +G  GD G  G+IG  G  GLPGE G+ G  G  G  G PG  G  G+ G+
Sbjct: 825 AGEPGPEGLKGEVGDQGNIGKIGETGPIGLPGEVGITGSIGEKGERGSPGPLGPQGEKGV 884

Query: 232 ------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                             PG  G  G  G  GP+G RG  G +G+ G   I   K E
Sbjct: 885 MGYPGPPGDPGPIGPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGE 941



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 44/87 (50%), Gaps = 6/87 (6%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            QG C        PGL+G  G+ G  G  G  G  G RG +G  G+VG  GP+G  G  G 
Sbjct: 1372 QGPCGE------PGLKGQPGEHGVQGLTGFQGFPGPRGPEGDAGIVGISGPKGPIGQRGN 1425

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGD 186
             GP G  G  GP G  G  G++G +G+
Sbjct: 1426 TGPFGKEGIIGPTGRTGPRGEKGFRGE 1452


>gi|334321926|ref|XP_001365693.2| PREDICTED: collagen alpha-1(XXIV) chain [Monodelphis domestica]
          Length = 1700

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 82/144 (56%), Gaps = 9/144 (6%)

Query: 133  KGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +GERGE GA G    VG PG +G  G +G  G  G+MG PGP+G   + G  GPKG  G 
Sbjct: 1201 RGERGESGAEGYKGHVGVPGQRGAIGQQGAPGEPGEMGEPGPKG---ERGSEGPKGKKGA 1257

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            PG  G  G  GL G PG  G PG +G +GI    GK GLPG+ G+PG  G  G  GMTGP
Sbjct: 1258 PGPSGKPGIPGLMGPPGQKGEPGYHGAEGILGNSGKVGLPGRPGLPGIKGNTGRTGMTGP 1317

Query: 247  RGNRGKSGINGVPGTPAICAYKRE 270
             G RG  G +G+PG P     K E
Sbjct: 1318 PGTRGAKGSSGMPGNPGAPGPKGE 1341



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 88/170 (51%), Gaps = 6/170 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG- 155
            +  QG      E   PG   P G++G  G KG+ G  G  G+ G PG++GPPG +G PG 
Sbjct: 1225 IGQQGAPGEPGEMGEPG---PKGERGSEGPKGKKGAPGPSGKPGIPGLMGPPGQKGEPGY 1281

Query: 156  --DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
               EG  G  G +G PG  G+PG +G  G  G  G PG  G  G  G+PG PG  G  G 
Sbjct: 1282 HGAEGILGNSGKVGLPGRPGLPGIKGNTGRTGMTGPPGTRGAKGSSGMPGNPGAPGPKGE 1341

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ G PGK G  G  G+ G  G +G+ GM G  G+RG  G+ G  G P 
Sbjct: 1342 QGLPGHPGKPGRRGHVGMQGNQGPHGDHGMKGQSGDRGDQGLMGFQGFPG 1391



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/155 (47%), Positives = 88/155 (56%), Gaps = 6/155 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGD 165
            PG +G IGQ+G  G  GEMG    KGERG +G  G  G PGP    GIPG  G  G KG+
Sbjct: 1219 PGQRGAIGQQGAPGEPGEMGEPGPKGERGSEGPKGKKGAPGPSGKPGIPGLMGPPGQKGE 1278

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GY G +GI G+ GK G  G  G PG  G  GR G+ G PG  G  G +GM G PG  G 
Sbjct: 1279 PGYHGAEGILGNSGKVGLPGRPGLPGIKGNTGRTGMTGPPGTRGAKGSSGMPGNPGAPGP 1338

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G+PG  G  G +G  G +GN+G  G +G+ G
Sbjct: 1339 KGEQGLPGHPGKPGRRGHVGMQGNQGPHGDHGMKG 1373



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 79/151 (52%), Gaps = 6/151 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  G  G KG +G  G+ G  G++G  G PG +G PGP+G   + G  GPKG  G PGP 
Sbjct: 1205 GESGAEGYKGHVGVPGQRGAIGQQGAPGEPGEMGEPGPKG---ERGSEGPKGKKGAPGPS 1261

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G PG  G  GP G  G PG     G +G+ G  G  G+PGR G+ GI G  G  G  G P
Sbjct: 1262 GKPGIPGLMGPPGQKGEPG---YHGAEGILGNSGKVGLPGRPGLPGIKGNTGRTGMTGPP 1318

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            GT G  G  GM G  G  G  G  G+PG P 
Sbjct: 1319 GTRGAKGSSGMPGNPGAPGPKGEQGLPGHPG 1349



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 89/161 (55%), Gaps = 9/161 (5%)

Query: 112  PGLQGPIGQKG---------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PGLQGP GQ+G         E G +G  G KG++G+KG PG++G  G  G  G +GK G 
Sbjct: 903  PGLQGPKGQRGPRGLDGLPGEQGMQGIKGEKGDQGKKGLPGLIGNAGNPGERGAQGKPGL 962

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            +G  G  G +G PG+ G RG +GD G  G +G +G  G+ GEPG  G PG  G  G  G 
Sbjct: 963  QGTPGSVGDKGPPGEPGARGQQGDAGPIGEMGPEGPPGIEGEPGPQGEPGAKGDSGPAGS 1022

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G+ GI G  GT GE G+ G  G +G  G  G PG P 
Sbjct: 1023 VGGSGEPGIRGEPGTPGEDGLQGKDGAKGIIGDRGPPGEPG 1063



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 83/145 (57%), Gaps = 3/145 (2%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G +G +G  G++G +G++G  G+ G PG QG+ G +G++G +G  G PG  G  G+ G+R
Sbjct: 895  GHLGTRGLPGLQGPKGQRGPRGLDGLPGEQGMQGIKGEKGDQGKKGLPGLIGNAGNPGER 954

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G +G  G  G  G  G  G PGEPG  G  G  G  G  G +G PG +G PG  G  G K
Sbjct: 955  GAQGKPGLQGTPGSVGDKGPPGEPGARGQQGDAGPIGEMGPEGPPGIEGEPGPQGEPGAK 1014

Query: 242  GMTGPRGNRGKS---GINGVPGTPA 263
            G +GP G+ G S   GI G PGTP 
Sbjct: 1015 GDSGPAGSVGGSGEPGIRGEPGTPG 1039



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 85/152 (55%), Gaps = 12/152 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPGPQGIP 175
           G++G +G +G  G KG RG  G+PG+ G PGP+G   +PG  G++GPKG       QG P
Sbjct: 586 GRQGLVGPEGNQGPKGVRGFIGSPGMAGQPGPEGERGVPGPRGRKGPKGR------QGFP 639

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+ G RGP G  G PG +G  G  G PG  G  G  G NG  GIPG  GLPG  G PG  
Sbjct: 640 GEFGDRGPAGPDGNPGIVGGAGPPGFPGLRGAAGPVGANGPSGIPGPMGLPGNMGQPGIK 699

Query: 236 GTNGEKGMTGPRGNR---GKSGINGVPGTPAI 264
           G  GE+G+ G  G     G  G  G+PG P +
Sbjct: 700 GDKGEQGIVGDPGELGYPGDKGAIGLPGPPGM 731



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/146 (43%), Positives = 78/146 (53%), Gaps = 6/146 (4%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             MQG      +    GL G IG  G     GE G +G+ G +G PG VG  GP G PG  
Sbjct: 925  GMQGIKGEKGDQGKKGLPGLIGNAGN---PGERGAQGKPGLQGTPGSVGDKGPPGEPGAR 981

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G++G  G +G  GP+G PG EG+ GP+G+ G  G  G  G  G  GEPG+ G PG  G D
Sbjct: 982  GQQGDAGPIGEMGPEGPPGIEGEPGPQGEPGAKGDSGPAGSVGGSGEPGIRGEPGTPGED 1041

Query: 218  GIPGKD---GLPGKDGIPGTNGTNGE 240
            G+ GKD   G+ G  G PG  G  GE
Sbjct: 1042 GLQGKDGAKGIIGDRGPPGEPGDQGE 1067



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 75/146 (51%), Gaps = 3/146 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP GQKGE G  G  G+ G  G+ G PG  G PG +G  G  G  GP G  G  G 
Sbjct: 1267 PGLMGPPGQKGEPGYHGAEGILGNSGKVGLPGRPGLPGIKGNTGRTGMTGPPGTRGAKGS 1326

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGK 228
             G+PG+ G  GPKG+ G PG  G  GR G  G  G  G  G +GM G     G  GL G 
Sbjct: 1327 SGMPGNPGAPGPKGEQGLPGHPGKPGRRGHVGMQGNQGPHGDHGMKGQSGDRGDQGLMGF 1386

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G PG  G  G+ GM G  G +G  G
Sbjct: 1387 QGFPGPKGPEGDVGMVGILGPKGPIG 1412



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 85/203 (41%), Gaps = 39/203 (19%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG   S  +  PPG  G  GQ+G+ G  GEMG       +G PG+ G PGPQG PG +
Sbjct: 961  GLQGTPGSVGDKGPPGEPGARGQQGDAGPIGEMG------PEGPPGIEGEPGPQGEPGAK 1014

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG----------- 206
            G  GP G +G  G  GI G+ G  G  G  G  G  G+ G  G PGEPG           
Sbjct: 1015 GDSGPAGSVGGSGEPGIRGEPGTPGEDGLQGKDGAKGIIGDRGPPGEPGDQGEAGLPGII 1074

Query: 207  ----------------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                                    G PG+ G  G  G  G  G  G PG  G  G KG  
Sbjct: 1075 GPLGGPGTIGPPGPEGAVGNPGQRGRPGKKGEKGQLGPIGEIGSTGAPGQMGEIGPKGAR 1134

Query: 245  GPRGNRGKSGINGVPGTPAICAY 267
            G RG  G  G+ G  G P I  Y
Sbjct: 1135 GTRGPVGNLGLMGPEGEPGIPGY 1157



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 85/180 (47%), Gaps = 39/180 (21%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           +GP+G  GE+G +G+ G KG  GE G  G+ G PG QG  G  G+ GP   +G PG  GI
Sbjct: 795 EGPVGPFGELGPRGKPGRKGYAGEPGPDGLKGEPGDQGHLGKVGEAGP---IGLPGEVGI 851

Query: 175 PGDEGKRGPK---------------------------------GDMGYPGRIGLDGRDGL 201
            G  G++G +                                 G +G  G  GL G  G 
Sbjct: 852 TGSSGEKGERGSPGPVGPPGEKGIMGYPGPPGDPGPIGPLGLPGHLGTRGLPGLQGPKGQ 911

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  GLDG+PG  GM GI G+ G  GK G+PG  G  G  G    RG +GK G+ G PG+
Sbjct: 912 RGPRGLDGLPGEQGMQGIKGEKGDQGKKGLPGLIGNAGNPGE---RGAQGKPGLQGTPGS 968



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 76/158 (48%), Gaps = 8/158 (5%)

Query: 102  FCNSTKEYCP-----PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              NS K   P     PG++G  G+ G  G  G  G KG  G  G PG  GP G QG+PG 
Sbjct: 1288 LGNSGKVGLPGRPGLPGIKGNTGRTGMTGPPGTRGAKGSSGMPGNPGAPGPKGEQGLPGH 1347

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             GK G +G +G  G QG  GD G +G  GD G  G +G     G PG  G +G  G  G+
Sbjct: 1348 PGKPGRRGHVGMQGNQGPHGDHGMKGQSGDRGDQGLMGF---QGFPGPKGPEGDVGMVGI 1404

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G  G  G  G  G  G  G TGPRG +G  G
Sbjct: 1405 LGPKGPIGQMGNIGHLGREGIIGPTGKTGPRGEKGHRG 1442



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 99/269 (36%), Gaps = 78/269 (28%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQG 152
           L    G+        P G QGP G +G IG+ G  G  G  GE+G PG     GP G QG
Sbjct: 578 LAGSPGYPGRQGLVGPEGNQGPKGVRGFIGSPGMAGQPGPEGERGVPGPRGRKGPKGRQG 637

Query: 153 IPGDEGKRGPKGD------------------------------MGYPGPQGIPGDEGKRG 182
            PG+ G RGP G                                G PGP G+PG+ G+ G
Sbjct: 638 FPGEFGDRGPAGPDGNPGIVGGAGPPGFPGLRGAAGPVGANGPSGIPGPMGLPGNMGQPG 697

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------------- 229
            KGD G  G +G  G  G PG+ G  G+PG  GM G PG  G  G               
Sbjct: 698 IKGDKGEQGIVGDPGELGYPGDKGAIGLPGPPGMRGKPGPSGQAGDPGPQGPFGPPGPEG 757

Query: 230 -----GIPGTNGTNGEKGM---------------------------TGPRGNRGKSGING 257
                GIPG NG  G KG+                            GPRG  G+ G  G
Sbjct: 758 FPGDIGIPGQNGPEGPKGLLGNRGLPGPPGPKGTEGEEGPVGPFGELGPRGKPGRKGYAG 817

Query: 258 VPGTPAICAYKRESCSLLPNSETSQLLIP 286
            PG   +     +   L    E   + +P
Sbjct: 818 EPGPDGLKGEPGDQGHLGKVGEAGPIGLP 846



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 84/185 (45%), Gaps = 39/185 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------------I 153
           PGL GP G KG+ G      + GE+G+ G  G++GPPG QG                  +
Sbjct: 513 PGLPGPKGPKGDPGLSPGQAMVGEKGDPGLLGLIGPPGFQGDKGVKGYPGPPGPRGDQGL 572

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG  G     G  GYPG QG+ G EG +GPKG  G+   IG  G  G PG  G  G+PG 
Sbjct: 573 PGMAGL---AGSPGYPGRQGLVGPEGNQGPKGVRGF---IGSPGMAGQPGPEGERGVPGP 626

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGE---------------KGMTGPRGNRGKSGINGV 258
            G  G  G+ G PG+ G  G  G +G                +G  GP G  G SGI G 
Sbjct: 627 RGRKGPKGRQGFPGEFGDRGPAGPDGNPGIVGGAGPPGFPGLRGAAGPVGANGPSGIPGP 686

Query: 259 PGTPA 263
            G P 
Sbjct: 687 MGLPG 691



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 84/179 (46%), Gaps = 33/179 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
           PG +G  G+ G  G KGE G +G  G+ G  G +G PG  GI G  G++G +        
Sbjct: 810 PGRKGYAGEPGPDGLKGEPGDQGHLGKVGEAGPIGLPGEVGITGSSGEKGERGSPGPVGP 869

Query: 164 -------------------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                                    G +G  G  G+ G +G+RGP+G  G PG  G+ G 
Sbjct: 870 PGEKGIMGYPGPPGDPGPIGPLGLPGHLGTRGLPGLQGPKGQRGPRGLDGLPGEQGMQGI 929

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G+ G  G+PG  G  G PG+ G  GK G+ GT G+ G+KG  G  G RG+ G  G
Sbjct: 930 KGEKGDQGKKGLPGLIGNAGNPGERGAQGKPGLQGTPGSVGDKGPPGEPGARGQQGDAG 988



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 74/158 (46%), Gaps = 24/158 (15%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDMGYPGPQGIPGDE-- 178
           +G  G+ G  G  G PG+ GP GP+G PG        G++G  G +G  GP G  GD+  
Sbjct: 498 RGPRGMPGPHGNPGLPGLPGPKGPKGDPGLSPGQAMVGEKGDPGLLGLIGPPGFQGDKGV 557

Query: 179 ----------------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
                           G  G  G  GYPGR GL G +G  G  G+ G  G  GM G PG 
Sbjct: 558 KGYPGPPGPRGDQGLPGMAGLAGSPGYPGRQGLVGPEGNQGPKGVRGFIGSPGMAGQPGP 617

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G  G  G  G  G  G +G  G  G+RG +G +G PG
Sbjct: 618 EGERGVPGPRGRKGPKGRQGFPGEFGDRGPAGPDGNPG 655



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 99/237 (41%), Gaps = 78/237 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQG---------------- 152
           PG++G  G++G +G  GE+G  G++G     G PG+ G PGP G                
Sbjct: 696 PGIKGDKGEQGIVGDPGELGYPGDKGAIGLPGPPGMRGKPGPSGQAGDPGPQGPFGPPGP 755

Query: 153 --------IPGDEGKRGPKGDM------------------------------GYPGPQGI 174
                   IPG  G  GPKG +                              G PG +G 
Sbjct: 756 EGFPGDIGIPGQNGPEGPKGLLGNRGLPGPPGPKGTEGEEGPVGPFGELGPRGKPGRKGY 815

Query: 175 ---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
              PG +G +G  GD G+ G++G  G  GLPGE G+ G  G  G  G PG  G PG+ GI
Sbjct: 816 AGEPGPDGLKGEPGDQGHLGKVGEAGPIGLPGEVGITGSSGEKGERGSPGPVGPPGEKGI 875

Query: 232 ------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                             PG  GT G  G+ GP+G RG  G++G+PG   +   K E
Sbjct: 876 MGYPGPPGDPGPIGPLGLPGHLGTRGLPGLQGPKGQRGPRGLDGLPGEQGMQGIKGE 932



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 90/243 (37%), Gaps = 88/243 (36%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------------------- 143
            PG++G  G  GE G +G+ G KG  G++G PG                            
Sbjct: 1029 PGIRGEPGTPGEDGLQGKDGAKGIIGDRGPPGEPGDQGEAGLPGIIGPLGGPGTIGPPGP 1088

Query: 144  --VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
               VG PG +G PG +G++G  G +G  G  G PG  G+ GPKG  G  G +G  G  G 
Sbjct: 1089 EGAVGNPGQRGRPGKKGEKGQLGPIGEIGSTGAPGQMGEIGPKGARGTRGPVGNLGLMGP 1148

Query: 202  PGEPGL----------------------------------------------------DG 209
             GEPG+                                                     G
Sbjct: 1149 EGEPGIPGYGGHQGQPGPPGMPGPKGEKGYPGDDNKVLGPPGPLGEPGPIGNRGERGESG 1208

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGT------NGEKGMTGPRGNRGKSGINGVPGTPA 263
              G  G  G+PG+ G  G+ G PG  G        GE+G  GP+G +G  G +G PG P 
Sbjct: 1209 AEGYKGHVGVPGQRGAIGQQGAPGEPGEMGEPGPKGERGSEGPKGKKGAPGPSGKPGIPG 1268

Query: 264  ICA 266
            +  
Sbjct: 1269 LMG 1271



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 62/118 (52%), Gaps = 11/118 (9%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY-PGRIGLDGRDGLPGEPGLDGIPGRNG-- 215
           +RGP+G  G  G  G+PG  G +GPKGD G  PG+  + G  G PG  GL G PG  G  
Sbjct: 497 RRGPRGMPGPHGNPGLPGLPGPKGPKGDPGLSPGQA-MVGEKGDPGLLGLIGPPGFQGDK 555

Query: 216 -------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                    G  G  GLPG  G+ G+ G  G +G+ GP GN+G  G+ G  G+P +  
Sbjct: 556 GVKGYPGPPGPRGDQGLPGMAGLAGSPGYPGRQGLVGPEGNQGPKGVRGFIGSPGMAG 613



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 92/250 (36%), Gaps = 90/250 (36%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------ 145
            M G      E   PG +G  G KG  G  GE G +G  G  G PG+V            
Sbjct: 610 GMAGQPGPEGERGVPGPRGRKGPKGRQGFPGEFGDRGPAGPDGNPGIVGGAGPPGFPGLR 669

Query: 146 ------------GPPGPQGIPGDEGKRGPKGD------MGYPGPQGIPGDE--------- 178
                       G PGP G+PG+ G+ G KGD      +G PG  G PGD+         
Sbjct: 670 GAAGPVGANGPSGIPGPMGLPGNMGQPGIKGDKGEQGIVGDPGELGYPGDKGAIGLPGPP 729

Query: 179 ---GKRGPKGD---------------------MGYPGRIGLDGRDGLP------------ 202
              GK GP G                      +G PG+ G +G  GL             
Sbjct: 730 GMRGKPGPSGQAGDPGPQGPFGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGLPGPPGPK 789

Query: 203 ------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                       GE G  G PGR G  G PG DGL G+   PG  G  G+ G  GP G  
Sbjct: 790 GTEGEEGPVGPFGELGPRGKPGRKGYAGEPGPDGLKGE---PGDQGHLGKVGEAGPIGLP 846

Query: 251 GKSGINGVPG 260
           G+ GI G  G
Sbjct: 847 GEVGITGSSG 856


>gi|395530618|ref|XP_003767386.1| PREDICTED: collagen alpha-1(XXIV) chain [Sarcophilus harrisii]
          Length = 1661

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/158 (47%), Positives = 92/158 (58%), Gaps = 12/158 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV---KGERG------EKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG +G IGQ+G  G  GEMG    KGERG      +KGAPG+ G PG   IPG  G  G 
Sbjct: 1180 PGPRGAIGQQGAPGEPGEMGEPGPKGERGSDGPKGKKGAPGLSGKPG---IPGLMGPPGR 1236

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            KG+ GY G +GI G+ GK G  G  G PG  G  GR G+ G PG  GI G +GM G PG 
Sbjct: 1237 KGEPGYHGAEGILGNSGKVGLPGRPGLPGIKGNTGRMGIAGSPGAQGIKGSSGMPGTPGV 1296

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+ G+PG  G  G++G  G +GN+G  G +G+ G
Sbjct: 1297 PGPKGEQGLPGHPGKPGKRGYPGAQGNQGPHGDHGMKG 1334



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/143 (47%), Positives = 82/143 (57%), Gaps = 9/143 (6%)

Query: 134  GERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            GERGE GA G    VG PGP+G  G +G  G  G+MG PGP+G   + G  GPKG  G P
Sbjct: 1163 GERGESGAEGYKGHVGVPGPRGAIGQQGAPGEPGEMGEPGPKG---ERGSDGPKGKKGAP 1219

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G  G  G  GL G PG  G PG +G +GI    GK GLPG+ G+PG  G  G  G+ G  
Sbjct: 1220 GLSGKPGIPGLMGPPGRKGEPGYHGAEGILGNSGKVGLPGRPGLPGIKGNTGRMGIAGSP 1279

Query: 248  GNRGKSGINGVPGTPAICAYKRE 270
            G +G  G +G+PGTP +   K E
Sbjct: 1280 GAQGIKGSSGMPGTPGVPGPKGE 1302



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 90/173 (52%), Gaps = 12/173 (6%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP-- 154
            +  QG      E   PG   P G++G  G KG+ G  G  G+ G PG++GPPG +G P  
Sbjct: 1186 IGQQGAPGEPGEMGEPG---PKGERGSDGPKGKKGAPGLSGKPGIPGLMGPPGRKGEPGY 1242

Query: 155  -GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G EG  G  G +G PG  G+PG +G  G  G  G PG  G+ G  G+PG P   G+PG 
Sbjct: 1243 HGAEGILGNSGKVGLPGRPGLPGIKGNTGRMGIAGSPGAQGIKGSSGMPGTP---GVPGP 1299

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G+PG  G PGK G PG  G    +G+ GM G  G+ G  G+ G  G P 
Sbjct: 1300 KGEQGLPGHPGKPGKRGYPGAQGNQGPHGDHGMKGQSGDHGDQGLMGFQGFPG 1352



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/155 (45%), Positives = 85/155 (54%), Gaps = 6/155 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  G  G KG +G  G  G  G++G  G PG +G PGP+G  G +G +G KG  G  G  
Sbjct: 1166 GESGAEGYKGHVGVPGPRGAIGQQGAPGEPGEMGEPGPKGERGSDGPKGKKGAPGLSGKP 1225

Query: 173  GIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLP 226
            GIPG  G  G KG+ GY G  G+    G+ GLPG PGL GI    GR G+ G PG  G+ 
Sbjct: 1226 GIPGLMGPPGRKGEPGYHGAEGILGNSGKVGLPGRPGLPGIKGNTGRMGIAGSPGAQGIK 1285

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G+PGT G  G KG  G  G+ GK G  G PG 
Sbjct: 1286 GSSGMPGTPGVPGPKGEQGLPGHPGKPGKRGYPGA 1320



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 93/196 (47%), Gaps = 12/196 (6%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L   QG   S  E    G +G  G  G  G  GE G +G+ G +GAPG +G  GP G PG
Sbjct: 881  LPGEQGIQGSKGEKGDQGKKGLHGLIGNAGNPGERGAQGKPGLQGAPGSMGDKGPPGEPG 940

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
              GK G  G +G  GP+G PG EG+ G +G+ G  G +G  G  G  GEPGL G PG  G
Sbjct: 941  ARGKPGDAGPVGEMGPEGPPGIEGESGLQGEPGTKGDLGPVGNVGASGEPGLRGEPGTPG 1000

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR------------GNRGKSGINGVPGTPA 263
             DG+ GKDG+ G  G  G  G  GE+G TG              G  G  G  G PG   
Sbjct: 1001 EDGLQGKDGIKGHIGDTGPPGEPGEQGETGLPGIIGPSGGPGTIGPSGPEGAVGNPGQRG 1060

Query: 264  ICAYKRESCSLLPNSE 279
                K E   L P  E
Sbjct: 1061 RPGKKGEKGQLGPTGE 1076



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 91/168 (54%), Gaps = 21/168 (12%)

Query: 112  PGLQGPIGQKG---------EIGAKGEMGVKGERGEKGAPGVV---GPPGPQGIPGDEGK 159
            PGLQGP G++G         E G +G  G KG++G+KG  G++   G PG +G  G  G 
Sbjct: 864  PGLQGPKGRRGPRGLDGLPGEQGIQGSKGEKGDQGKKGLHGLIGNAGNPGERGAQGKPGL 923

Query: 160  RGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------ 210
            +G  G MG  GP G PG  GK    GP G+MG  G  G++G  GL GEPG  G       
Sbjct: 924  QGAPGSMGDKGPPGEPGARGKPGDAGPVGEMGPEGPPGIEGESGLQGEPGTKGDLGPVGN 983

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G +G  G+ G+ G PG+DG+ G +G  G  G TGP G  G+ G  G+
Sbjct: 984  VGASGEPGLRGEPGTPGEDGLQGKDGIKGHIGDTGPPGEPGEQGETGL 1031



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 80/145 (55%), Gaps = 3/145 (2%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G +G +G  G++G +G +G  G+ G PG QGI G +G++G +G  G  G  G  G+ G+R
Sbjct: 856  GHVGTRGLPGLQGPKGRRGPRGLDGLPGEQGIQGSKGEKGDQGKKGLHGLIGNAGNPGER 915

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G +G  G  G  G  G  G PGEPG  G PG  G  G  G +G PG +G  G  G  G K
Sbjct: 916  GAQGKPGLQGAPGSMGDKGPPGEPGARGKPGDAGPVGEMGPEGPPGIEGESGLQGEPGTK 975

Query: 242  GMTGPRGNRGKS---GINGVPGTPA 263
            G  GP GN G S   G+ G PGTP 
Sbjct: 976  GDLGPVGNVGASGEPGLRGEPGTPG 1000



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 90/192 (46%), Gaps = 48/192 (25%)

Query: 112 PGLQGPIGQKGEIGAK---GEMGVKGERGEKGA--------------------------- 141
           PG QG +G+ GE+G     GE+G  G  GEKG                            
Sbjct: 789 PGDQGHLGKVGEVGLTGLPGEVGTTGSSGEKGERGSPGPVGPPGEKGIMGYPGPPGDPGP 848

Query: 142 ------PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                 PG VG  G  G+ G +G+RGP+G  G PG QGI   +G +G KGD G  G  GL
Sbjct: 849 IGPLGLPGHVGTRGLPGLQGPKGRRGPRGLDGLPGEQGI---QGSKGEKGDQGKKGLHGL 905

Query: 196 DGRDGLPGE------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G  G PGE      PGL G PG  G  G PG+   PG  G PG  G  GE G  GP G 
Sbjct: 906 IGNAGNPGERGAQGKPGLQGAPGSMGDKGPPGE---PGARGKPGDAGPVGEMGPEGPPGI 962

Query: 250 RGKSGINGVPGT 261
            G+SG+ G PGT
Sbjct: 963 EGESGLQGEPGT 974



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/146 (43%), Positives = 74/146 (50%), Gaps = 3/146 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G+KGE G  G  G+ G  G+ G PG  G PG +G  G  G  G  G  G  G 
Sbjct: 1228 PGLMGPPGRKGEPGYHGAEGILGNSGKVGLPGRPGLPGIKGNTGRMGIAGSPGAQGIKGS 1287

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGK 228
             G+PG  G  GPKG+ G PG  G  G+ G PG  G  G  G +GM G     G  GL G 
Sbjct: 1288 SGMPGTPGVPGPKGEQGLPGHPGKPGKRGYPGAQGNQGPHGDHGMKGQSGDHGDQGLMGF 1347

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G PG  G  G+ GM G  G +G  G
Sbjct: 1348 QGFPGPKGPEGDIGMVGVLGPKGPVG 1373



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 74/143 (51%), Gaps = 3/143 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G  G+ G  G+ G  G+KG  G  G PGV GP G QG+PG  GK G +   GYPG 
Sbjct: 1264 PGIKGNTGRMGIAGSPGAQGIKGSSGMPGTPGVPGPKGEQGLPGHPGKPGKR---GYPGA 1320

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG  G  G  G KG  G  G  GL G  G PG  G +G  G  G+ G  G  G  G  G 
Sbjct: 1321 QGNQGPHGDHGMKGQSGDHGDQGLMGFQGFPGPKGPEGDIGMVGVLGPKGPVGQVGNTGP 1380

Query: 232  PGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G  G TGPRG +G  G
Sbjct: 1381 FGREGIIGPTGKTGPRGEKGHRG 1403



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 27/177 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQG  G  G+ G  GE G +G+ G+ G  G +GP GP GI G+ G +G  G  G  GP
Sbjct: 921  PGLQGAPGSMGDKGPPGEPGARGKPGDAGPVGEMGPEGPPGIEGESGLQGEPGTKGDLGP 980

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---------PGEPGLD-------------- 208
             G  G  G+ G +G+ G PG  GL G+DG+         PGEPG                
Sbjct: 981  VGNVGASGEPGLRGEPGTPGEDGLQGKDGIKGHIGDTGPPGEPGEQGETGLPGIIGPSGG 1040

Query: 209  ----GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                G  G  G  G PG+ G PGK G  G  G  GE G TG  G  G+ G  G  GT
Sbjct: 1041 PGTIGPSGPEGAVGNPGQRGRPGKKGEKGQLGPTGEIGSTGALGQTGEIGPKGARGT 1097



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/160 (43%), Positives = 83/160 (51%), Gaps = 3/160 (1%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG++G  G +GE G KG++G  G  G  G PG+ G PG  G  G +GK G KG +G  G
Sbjct: 959  PPGIEGESGLQGEPGTKGDLGPVGNVGASGEPGLRGEPGTPGEDGLQGKDGIKGHIGDTG 1018

Query: 171  PQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            P G PG++G+ G     G  G PG IG  G +G  G PG  G PG+ G  G  G  G  G
Sbjct: 1019 PPGEPGEQGETGLPGIIGPSGGPGTIGPSGPEGAVGNPGQRGRPGKKGEKGQLGPTGEIG 1078

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
              G  G  G  G KG  G RG  G  G+ G  G P I  Y
Sbjct: 1079 STGALGQTGEIGPKGARGTRGPVGSLGLMGPEGEPGIPGY 1118



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 95/247 (38%), Gaps = 87/247 (35%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGPPGPQG------------ 152
           P GL G +GQ G  G KGE G+ GE GE      KGA G+ GPPG +G            
Sbjct: 647 PMGLPGNMGQPGIKGDKGEQGIAGEPGEPGYPGDKGALGLPGPPGMRGKPGPSGQPGDPG 706

Query: 153 ------------------IPGDEGKRGPKGDMGYP---------------GPQGIPGDEG 179
                             IPG  G  GPKG +G                 GP G  G+ G
Sbjct: 707 PHGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGLPGPPGPKGTEGEEGPVGPFGELG 766

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG--------- 230
            RG  G  GY G  G DG  G PG+ G  G  G  G+ G+PG+ G  G  G         
Sbjct: 767 PRGKPGRKGYAGEPGPDGLKGEPGDQGHLGKVGEVGLTGLPGEVGTTGSSGEKGERGSPG 826

Query: 231 ---------------------------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                                      +PG  GT G  G+ GP+G RG  G++G+PG   
Sbjct: 827 PVGPPGEKGIMGYPGPPGDPGPIGPLGLPGHVGTRGLPGLQGPKGRRGPRGLDGLPGEQG 886

Query: 264 ICAYKRE 270
           I   K E
Sbjct: 887 IQGSKGE 893



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 88/227 (38%), Gaps = 84/227 (37%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKG------- 164
           +GP G KG+ G      + GE+G+ G  G++GPPG QG    PG+ G+RGP G       
Sbjct: 558 RGPRGPKGDPGLSPGQAIAGEKGDPGLFGLIGPPGFQGNKGFPGEFGERGPAGLDGNPGF 617

Query: 165 -----------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                             +G  GP GIPG  G     G+MG PG  G  G  G+ GEPG 
Sbjct: 618 VGGAGPPGFPGLRGAVGPLGASGPSGIPGPMGL---PGNMGQPGIKGDKGEQGIAGEPGE 674

Query: 208 DGIPGRNGMDGIPGKDGLPGKDG---------------------------IPGTNGTNGE 240
            G PG  G  G+PG  G+ GK G                           IPG NG  G 
Sbjct: 675 PGYPGDKGALGLPGPPGMRGKPGPSGQPGDPGPHGPSGPPGPEGFPGDIGIPGQNGPEGP 734

Query: 241 KGM---------------------------TGPRGNRGKSGINGVPG 260
           KG+                            GPRG  G+ G  G PG
Sbjct: 735 KGLLGNRGLPGPPGPKGTEGEEGPVGPFGELGPRGKPGRKGYAGEPG 781



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 81/180 (45%), Gaps = 39/180 (21%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           +GP+G  GE+G +G+ G KG  GE G  G+ G PG QG     GK G  G  G PG  G 
Sbjct: 756 EGPVGPFGELGPRGKPGRKGYAGEPGPDGLKGEPGDQG---HLGKVGEVGLTGLPGEVGT 812

Query: 175 PGDEGKRGPK---------------------------------GDMGYPGRIGLDGRDGL 201
            G  G++G +                                 G +G  G  GL G  G 
Sbjct: 813 TGSSGEKGERGSPGPVGPPGEKGIMGYPGPPGDPGPIGPLGLPGHVGTRGLPGLQGPKGR 872

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  GLDG+PG  G+ G  G+ G  GK G+   +G  G  G  G RG +GK G+ G PG+
Sbjct: 873 RGPRGLDGLPGEQGIQGSKGEKGDQGKKGL---HGLIGNAGNPGERGAQGKPGLQGAPGS 929



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 89/230 (38%), Gaps = 76/230 (33%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPPGPQGIP 154
            GLQG  G KG IG  G  G  GE+GE                   G  G VG PG +G P
Sbjct: 1003 GLQGKDGIKGHIGDTGPPGEPGEQGETGLPGIIGPSGGPGTIGPSGPEGAVGNPGQRGRP 1062

Query: 155  GDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---- 207
            G +G++   GP G++G  G  G  G+ G +G +G  G  G +GL G +G PG PG     
Sbjct: 1063 GKKGEKGQLGPTGEIGSTGALGQTGEIGPKGARGTRGPVGSLGLMGPEGEPGIPGYMGHQ 1122

Query: 208  ---------------------------------------------DGIPGRNGMDGIPGK 222
                                                          G  G  G  G+PG 
Sbjct: 1123 GQPGPPGLPGPKGEKGYPGEDNKVLGPPGPLGEPGPIGKPGERGESGAEGYKGHVGVPGP 1182

Query: 223  DGLPGKDGIPGTNGT------NGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             G  G+ G PG  G        GE+G  GP+G +G  G++G PG P +  
Sbjct: 1183 RGAIGQQGAPGEPGEMGEPGPKGERGSDGPKGKKGAPGLSGKPGIPGLMG 1232



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 73/152 (48%), Gaps = 30/152 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPPGPQGIPGDEGK--- 159
            PG +G +G  G +GA GE G++GE         +G+ G  G +G  GP G PG++G+   
Sbjct: 972  PGTKGDLGPVGNVGASGEPGLRGEPGTPGEDGLQGKDGIKGHIGDTGPPGEPGEQGETGL 1031

Query: 160  ---------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                            GP+G +G PG +G P   GK+G KG +G  G IG  G  G  GE
Sbjct: 1032 PGIIGPSGGPGTIGPSGPEGAVGNPGQRGRP---GKKGEKGQLGPTGEIGSTGALGQTGE 1088

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
             G  G  G  G  G  G  G  G+ GIPG  G
Sbjct: 1089 IGPKGARGTRGPVGSLGLMGPEGEPGIPGYMG 1120



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 62/127 (48%), Gaps = 9/127 (7%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
              QG   S+     PG+ GP   KGE G  G  G  G+RG  GA G  GP G  G+ G  
Sbjct: 1280 GAQGIKGSSGMPGTPGVPGP---KGEQGLPGHPGKPGKRGYPGAQGNQGPHGDHGMKGQS 1336

Query: 158  GKRGPKGDM---GYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G  G +G M   G+PGP+G  GD G     GPKG +G  G  G  GR+G+ G  G  G  
Sbjct: 1337 GDHGDQGLMGFQGFPGPKGPEGDIGMVGVLGPKGPVGQVGNTGPFGREGIIGPTGKTGPR 1396

Query: 212  GRNGMDG 218
            G  G  G
Sbjct: 1397 GEKGHRG 1403



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 6/88 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGY 168
            PG QG  G  G+ G KG+ G  G++G  G  G  GP GP+   G+ G  G +GP G +G 
Sbjct: 1318 PGAQGNQGPHGDHGMKGQSGDHGDQGLMGFQGFPGPKGPEGDIGMVGVLGPKGPVGQVGN 1377

Query: 169  PGP---QGIPGDEGKRGPKGDMGYPGRI 193
             GP   +GI G  GK GP+G+ G+ G +
Sbjct: 1378 TGPFGREGIIGPTGKTGPRGEKGHRGEM 1405


>gi|449508319|ref|XP_002191828.2| PREDICTED: collagen alpha-1(XXIV) chain [Taeniopygia guttata]
          Length = 2316

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 90/176 (51%), Gaps = 27/176 (15%)

Query: 112  PGLQGPI---GQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD 165
            PGL GPI   GQ GE G KGE G +G +G  G PG  GP    GP G PG+ G++G KG+
Sbjct: 1802 PGLPGPIGEPGQSGERGDKGEPGDEGYKGYTGLPGHRGPIGQQGPPGEPGELGEQGLKGE 1861

Query: 166  MGYPGP---QGIPGDEGKR------------------GPKGDMGYPGRIGLDGRDGLPGE 204
             G  GP   +G PG  GK                   GP+G  G PG+ GL G+ G  G 
Sbjct: 1862 RGSEGPTGKKGAPGQAGKAGVPGKPGPPGQTGIVGYPGPEGIPGNPGKTGLSGKPGPKGN 1921

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+PG  G  G  G  GLPG  G  G  G  GEKG+ G  G RGK G+ G PG
Sbjct: 1922 KGNSGLPGLAGYPGARGPKGLPGMPGPMGAPGLKGEKGLLGHPGKRGKRGLPGSPG 1977



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 92/176 (52%), Gaps = 30/176 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
            PG +GPIGQ+G  G  GE+G +G +GE+G+    GP G +G PG  GK G          
Sbjct: 1835 PGHRGPIGQQGPPGEPGELGEQGLKGERGS---EGPTGKKGAPGQAGKAGVPGKPGPPGQ 1891

Query: 164  -GDMGYPGPQGIPGD------EGKRGPKGD---------MGYPGRIGLDGRDGLPGEPGL 207
             G +GYPGP+GIPG+       GK GPKG+          GYPG  G  G  G+PG  G 
Sbjct: 1892 TGIVGYPGPEGIPGNPGKTGLSGKPGPKGNKGNSGLPGLAGYPGARGPKGLPGMPGPMGA 1951

Query: 208  DGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G  G+ G P   GK GLPG  G  G  G  G KG  G  G++G  G  G PG
Sbjct: 1952 PGLKGEKGLLGHPGKRGKRGLPGSPGDQGPAGATGLKGQIGEDGDQGLMGFQGFPG 2007



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 87/165 (52%), Gaps = 15/165 (9%)

Query: 105  STKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPPGPQGIPG 155
            +T +  P G  GP GQ GE G  GEMG +G          +GE G  G +GP G  G PG
Sbjct: 1584 ATGDRGPVGEPGPRGQPGEAGPIGEMGFEGPPGPEGEPGLQGEPGTKGDIGPAGKVGEPG 1643

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            D+G RG       PGP G  G +GK GPKGD G  G  G  G  G  G PG+ G PG  G
Sbjct: 1644 DQGLRG------EPGPPGEDGVQGKDGPKGDPGDQGLAGEGGEKGEMGLPGIAGPPGEPG 1697

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            + GIPG +G PG  G  G  G  GEKG  GP G  G +G +G PG
Sbjct: 1698 LMGIPGPEGTPGNPGQRGRLGKKGEKGQLGPPGETGPAGDSGQPG 1742



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 84/174 (48%), Gaps = 24/174 (13%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGP----- 162
            P G  GP G +G IG  G  G  G  GE+G PG+ G  GP   QG PGD G RGP     
Sbjct: 1224 PEGNPGPKGVRGFIGPPGVAGQPGPEGERGIPGLRGKRGPKGRQGFPGDFGNRGPPGPDG 1283

Query: 163  ----------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
                            +GDMG  GP G  G  G  G  G +G PG  G  G  GL G+PG
Sbjct: 1284 SPGIVGGVGPPGFPGLRGDMGPAGPSGPSGIPGPTGFPGSVGQPGMKGDKGEHGLAGDPG 1343

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G PG  G  G+PG  G+ GK G PG  G  G +G  GP+G  G  G  GVPG
Sbjct: 1344 DMGYPGDKGALGLPGPPGIRGKPGPPGKIGEPGPRGPLGPQGPEGFPGDIGVPG 1397



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 86/177 (48%), Gaps = 30/177 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQGP G++G  G  G +G  G  G +G  G  G PGP+G+    G  GP G  G PGP
Sbjct: 1192 PGLQGPRGEQGIPGMAGSIGAVGYPGRQGLAGPEGNPGPKGV---RGFIGPPGVAGQPGP 1248

Query: 172  QG---IPGDEGKRGPKGDMGYPGRIG------------------LDGRDGLPGEPGLDGI 210
            +G   IPG  GKRGPKG  G+PG  G                    G  GL G+    G 
Sbjct: 1249 EGERGIPGLRGKRGPKGRQGFPGDFGNRGPPGPDGSPGIVGGVGPPGFPGLRGD---MGP 1305

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR---GKSGINGVPGTPAI 264
             G +G  GIPG  G PG  G PG  G  GE G+ G  G+    G  G  G+PG P I
Sbjct: 1306 AGPSGPSGIPGPTGFPGSVGQPGMKGDKGEHGLAGDPGDMGYPGDKGALGLPGPPGI 1362



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 77/153 (50%), Gaps = 5/153 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G  G  G+ G  G+ G KG +G  G PG+ G PG +G  G  G  GP G  G  G 
Sbjct: 1898 PGPEGIPGNPGKTGLSGKPGPKGNKGNSGLPGLAGYPGARGPKGLPGMPGPMGAPGLKGE 1957

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-- 229
            +G+ G  GKRG +G  G PG  G  G  GL G+ G DG  G  G  G PG  G P  D  
Sbjct: 1958 KGLLGHPGKRGKRGLPGSPGDQGPAGATGLKGQIGEDGDQGLMGFQGFPGPKG-PAGDIG 2016

Query: 230  --GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              GI G  G  G+ G  GP G  G +G  G PG
Sbjct: 2017 LVGILGPKGPTGQVGYIGPVGQEGIAGPTGRPG 2049



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 79/159 (49%), Gaps = 21/159 (13%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  G +GQ G  G KGE G+ G+ G+ G PG  G  G  G PG  GK GP G +G PG
Sbjct: 1317 PTGFPGSVGQPGMKGDKGEHGLAGDPGDMGYPGDKGALGLPGPPGIRGKPGPPGKIGEPG 1376

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------LDGIPGRNG 215
            P+G        GP+G  G+PG IG+ G +G  G  G               ++G PG+ G
Sbjct: 1377 PRG------PLGPQGPEGFPGDIGVPGLNGPEGPKGALGDRGPPGPQGPKGVEGKPGQKG 1430

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              G PG +GL G+ G  G  G  GE G  G  G  G SG
Sbjct: 1431 YVGDPGPEGLKGEQGDQGNLGKTGEAGSAGLPGEAGTSG 1469



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/151 (40%), Positives = 78/151 (51%), Gaps = 15/151 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGI---PGDEGKRGPKGD 165
            PG++G  G+ G  G  G+MG  G++G     G PG+ G PGP G    PG  G  GP+G 
Sbjct: 1327 PGMKGDKGEHGLAGDPGDMGYPGDKGALGLPGPPGIRGKPGPPGKIGEPGPRGPLGPQGP 1386

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRI---------GLDGRDGLPGEPGLDGIPGRNGM 216
             G+PG  G+PG  G  GPKG +G  G           G  G+ G  G+PG +G+ G  G 
Sbjct: 1387 EGFPGDIGVPGLNGPEGPKGALGDRGPPGPQGPKGVEGKPGQKGYVGDPGPEGLKGEQGD 1446

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
             G  GK G  G  G+PG  GT+G  G  G R
Sbjct: 1447 QGNLGKTGEAGSAGLPGEAGTSGNLGDKGER 1477



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 94/225 (41%), Gaps = 73/225 (32%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE-------------- 157
            PG +G IG  G++G  G+ G++GE G  G  GV G  GP+G PGD+              
Sbjct: 1627 PGTKGDIGPAGKVGEPGDQGLRGEPGPPGEDGVQGKDGPKGDPGDQGLAGEGGEKGEMGL 1686

Query: 158  -GKRGPKGD---MGYPGPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGEPGL 207
             G  GP G+   MG PGP+G PG+ G+R      G KG +G PG  G  G  G PG+ G 
Sbjct: 1687 PGIAGPPGEPGLMGIPGPEGTPGNPGQRGRLGKKGEKGQLGPPGETGPAGDSGQPGKTGP 1746

Query: 208  DGIPGRNG------------------------------------MDGIPGKD----GLPG 227
             G  G  G                                      G PG+D    GLPG
Sbjct: 1747 KGARGTRGPVGHLGGMGPEGEPGIPGYGGHQGPPGPSGPPGPKGEKGYPGEDNTIPGLPG 1806

Query: 228  KDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPGTPA 263
              G PG +G  G+         KG TG  G+RG  G  G PG P 
Sbjct: 1807 PIGEPGQSGERGDKGEPGDEGYKGYTGLPGHRGPIGQQGPPGEPG 1851



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 90/185 (48%), Gaps = 34/185 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGV---------------KGERGEKGAPG----VVGPPGPQGI 153
            G +GP+G  G +G +GE G+                G +GEKG PG    + G PGP G 
Sbjct: 1751 GTRGPVGHLGGMGPEGEPGIPGYGGHQGPPGPSGPPGPKGEKGYPGEDNTIPGLPGPIGE 1810

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            PG  G+RG KG+ G  G +G  G  G RGP G  G PG  G  G  GL GE G +G  G+
Sbjct: 1811 PGQSGERGDKGEPGDEGYKGYTGLPGHRGPIGQQGPPGEPGELGEQGLKGERGSEGPTGK 1870

Query: 214  NGMDGIPGKD---------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G  G  GK                G PG +GIPG  G  G  G  GP+GN+G SG+ G+
Sbjct: 1871 KGAPGQAGKAGVPGKPGPPGQTGIVGYPGPEGIPGNPGKTGLSGKPGPKGNKGNSGLPGL 1930

Query: 259  PGTPA 263
             G P 
Sbjct: 1931 AGYPG 1935



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 79/192 (41%), Gaps = 46/192 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+ GP G+ G +G  G  G  G  G++G  G  G  G  G PG+    GP GD G PG 
Sbjct: 1687 PGIAGPPGEPGLMGIPGPEGTPGNPGQRGRLGKKGEKGQLGPPGE---TGPAGDSGQPGK 1743

Query: 172  QGIPGDEGKRGPKGDM-------------------------------------------G 188
             G  G  G RGP G +                                           G
Sbjct: 1744 TGPKGARGTRGPVGHLGGMGPEGEPGIPGYGGHQGPPGPSGPPGPKGEKGYPGEDNTIPG 1803

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             PG IG  G+ G  G+ G  G  G  G  G+PG  G  G+ G PG  G  GE+G+ G RG
Sbjct: 1804 LPGPIGEPGQSGERGDKGEPGDEGYKGYTGLPGHRGPIGQQGPPGEPGELGEQGLKGERG 1863

Query: 249  NRGKSGINGVPG 260
            + G +G  G PG
Sbjct: 1864 SEGPTGKKGAPG 1875



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 69/146 (47%), Gaps = 9/146 (6%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---------PGDEGKRGPK 163
            G  GP G KG  G  G  G  G RG KG PG+ GP G  G+         PG  GKRG  
Sbjct: 1914 GKPGPKGNKGNSGLPGLAGYPGARGPKGLPGMPGPMGAPGLKGEKGLLGHPGKRGKRGLP 1973

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G  G  GP G  G +G+ G  GD G  G  G  G  G  G+ GL GI G  G  G  G  
Sbjct: 1974 GSPGDQGPAGATGLKGQIGEDGDQGLMGFQGFPGPKGPAGDIGLVGILGPKGPTGQVGYI 2033

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G  G++GI G  G  G +G  G RG 
Sbjct: 2034 GPVGQEGIAGPTGRPGPRGEKGTRGE 2059



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 70/146 (47%), Gaps = 15/146 (10%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------------MGYPGPQGI 174
            +G  G+ G  G  G PG+ GP GP+G PG    R   G+             G  G +G+
Sbjct: 1129 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGRAKHGEKGDPGPMGFPGPPGIKGQKGL 1188

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
             G  G +GP+G+ G PG  G  G  G PG  GL G  G  G  G+ G  G PG  G P  
Sbjct: 1189 KGYPGLQGPRGEQGIPGMAGSIGAVGYPGRQGLAGPEGNPGPKGVRGFIGPPGVAGQP-- 1246

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  GE+G+ G RG RG  G  G PG
Sbjct: 1247 -GPEGERGIPGLRGKRGPKGRQGFPG 1271



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 70/141 (49%), Gaps = 9/141 (6%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L  + G+  +      PG+ GP+G  G  G KG +G  G+RG++G PG  G  GP G  G
Sbjct: 1927 LPGLAGYPGARGPKGLPGMPGPMGAPGLKGEKGLLGHPGKRGKRGLPGSPGDQGPAGATG 1986

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             +G+ G  GD G  G QG PG    +GP GD      IGL G  G  G  G  G  G  G
Sbjct: 1987 LKGQIGEDGDQGLMGFQGFPGP---KGPAGD------IGLVGILGPKGPTGQVGYIGPVG 2037

Query: 216  MDGIPGKDGLPGKDGIPGTNG 236
             +GI G  G PG  G  GT G
Sbjct: 2038 QEGIAGPTGRPGPRGEKGTRG 2058



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 85/183 (46%), Gaps = 39/183 (21%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG------ 167
            ++G  GQKG +G  G  G+KGE+G++G  G  G  G  G+PG+ G  G  GD G      
Sbjct: 1422 VEGKPGQKGYVGDPGPEGLKGEQGDQGNLGKTGEAGSAGLPGEAGTSGNLGDKGERGSPG 1481

Query: 168  ---YPGPQGI------------------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
                PG +G+                  PG  G RGP G  G  GR G  G DG PGE G
Sbjct: 1482 PVGPPGEKGVMGYPGPPGGPGPVGPEGLPGPSGARGPSGPQGAKGRRGPRGLDGPPGELG 1541

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGING 257
             +GI G     G PGK G+PG  G  G  G  GE+         G TG RG  G+ G  G
Sbjct: 1542 TEGIKGER---GDPGKKGVPGLIGKAGNPGEKGEQGGLGLLGPPGATGDRGPVGEPGPRG 1598

Query: 258  VPG 260
             PG
Sbjct: 1599 QPG 1601



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 82/200 (41%), Gaps = 66/200 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------------EGK 159
            PG +GP+G +G  G  G++GV         PG+ GP GP+G  GD            EGK
Sbjct: 1375 PGPRGPLGPQGPEGFPGDIGV---------PGLNGPEGPKGALGDRGPPGPQGPKGVEGK 1425

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------- 212
             G KG +G PGP+G+ G++      GD G  G+ G  G  GLPGE G  G  G       
Sbjct: 1426 PGQKGYVGDPGPEGLKGEQ------GDQGNLGKTGEAGSAGLPGEAGTSGNLGDKGERGS 1479

Query: 213  --------------------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                                             +G  G  G  G  G+ G  G +G  GE
Sbjct: 1480 PGPVGPPGEKGVMGYPGPPGGPGPVGPEGLPGPSGARGPSGPQGAKGRRGPRGLDGPPGE 1539

Query: 241  KGMTGPRGNRGKSGINGVPG 260
             G  G +G RG  G  GVPG
Sbjct: 1540 LGTEGIKGERGDPGKKGVPG 1559



 Score = 46.6 bits (109), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 51/118 (43%), Gaps = 30/118 (25%)

Query: 179  GKRGPK---GDMGYPGRIGLDGRDGLPGEPGLD---------------------GIPGRN 214
            GKRGP+   G  G PG  GL G  G  G+PG                       GI G+ 
Sbjct: 1127 GKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGRAKHGEKGDPGPMGFPGPPGIKGQK 1186

Query: 215  GMDGIPGKDGLPGKDGIPGTNGT------NGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G+ G PG  G  G+ GIPG  G+       G +G+ GP GN G  G+ G  G P +  
Sbjct: 1187 GLKGYPGLQGPRGEQGIPGMAGSIGAVGYPGRQGLAGPEGNPGPKGVRGFIGPPGVAG 1244


>gi|359320778|ref|XP_532042.4| PREDICTED: collagen alpha-1(XXVII) chain [Canis lupus familiaris]
          Length = 1878

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/156 (43%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G+ G +GE G  G  G++G PG+ G PG QG+PG  G RG       PGP+G  G+E
Sbjct: 1373 GSVGDRGDRGEPGDPGYPGQEGVPGLRGDPGQQGLPGHPGPRG------RPGPKGSKGEE 1426

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT- 237
            G +G  G  G PGR G+ G  GLPG     G+ GR G +G+ G DG PG+DG  G  G  
Sbjct: 1427 GPKGKHGKAGAPGRRGIQGLQGLPGP---RGVVGRQGPEGVAGPDGFPGRDGPAGQQGEQ 1483

Query: 238  --NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
              +G+ G  GP G RG  G+ G+PG      +K ES
Sbjct: 1484 GDDGDPGPVGPAGKRGNPGVAGLPGAQGPPGFKGES 1519



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 98/187 (52%), Gaps = 16/187 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP G+ G  G+KGE G KG+ G+ GAPG  G  G QG+PG  G  G +G  G  GP
Sbjct: 1408 PGHPGPRGRPGPKGSKGEEGPKGKHGKAGAPGRRGIQGLQGLPGPRGVVGRQGPEGVAGP 1467

Query: 172  QGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             G PG +   G++G +GD G PG +G  G+    G PG+ G+PG  G  G  G+ GLPG+
Sbjct: 1468 DGFPGRDGPAGQQGEQGDDGDPGPVGPAGKR---GNPGVAGLPGAQGPPGFKGESGLPGQ 1524

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPT 288
             G PG  GT G  G+    GNRG+ G  G PG      +   +    P         PP 
Sbjct: 1525 LGPPGKRGTAGGTGLP---GNRGEPGSKGQPGDSGEMGFPGMAGLFGPKG-------PPG 1574

Query: 289  IVGSEHI 295
             VGS+ I
Sbjct: 1575 DVGSKGI 1581



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 83/150 (55%), Gaps = 12/150 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEGK 159
            PG  GP GQ+GE G  G+ G  G  G++G PGV G PG QG PG              GK
Sbjct: 1471 PGRDGPAGQQGEQGDDGDPGPVGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGK 1530

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            RG  G  G PG +G PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+
Sbjct: 1531 RGTAGGTGLPGNRGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDVGSKGIQGPRGPPGL 1590

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             GK+G+ G  GI G +G  G KG  G RG+
Sbjct: 1591 MGKEGIIGPLGILGPSGRPGPKGDKGSRGD 1620



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/133 (50%), Positives = 76/133 (57%), Gaps = 6/133 (4%)

Query: 119 GQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G KG++G     G  G  G +G KG PG  G PG QG PG EG  G KG   YPG QG+P
Sbjct: 712 GAKGDVGLPGLSGNPGPVGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKG---YPGRQGLP 768

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G PG  G  G+ G PG +
Sbjct: 769 GPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPPGLD 828

Query: 236 GTNGEKGMTGPRG 248
           G  GE G+ GPRG
Sbjct: 829 GNPGELGLPGPRG 841



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 93/168 (55%), Gaps = 15/168 (8%)

Query: 112 PGLQG---PIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PGL G   P+G+KG  G  G  G  GE+G+   +G+PG  G PG QG+PG  G  GPKG 
Sbjct: 720 PGLSGNPGPVGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGS 779

Query: 166 MGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            GY   PG  G+PG +G+R   G  G PG+ G  GR G PG+ G  G P   G+DG PG+
Sbjct: 780 RGYIGLPGLFGLPGSDGER---GLPGVPGKRGKMGRPGFPGDFGERGPP---GLDGNPGE 833

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            GLPG  G+PG  G  G  G  G  G +G  G+ G  G P +   K E
Sbjct: 834 LGLPGPRGVPGLIGDMGALGPIGYPGPKGVKGLMGNVGQPGLKGDKGE 881



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 78/145 (53%), Gaps = 12/145 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G      + G +G+ G PG+ G PGP G          KG  GYPGP G PG++
Sbjct: 697 GQKGDPGLSPGKALDGAKGDVGLPGLSGNPGPVGR---------KGHKGYPGPAGHPGEQ 747

Query: 179 GKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+ GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  
Sbjct: 748 GQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKR 807

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  G RG  G++G PG
Sbjct: 808 GKMGRPGFPGDFGERGPPGLDGNPG 832



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 82/154 (53%), Gaps = 9/154 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GLQG  G +G +G +G  GV G  G  G  G  G  G QG  GD G  GP G  G PG  
Sbjct: 1445 GLQGLPGPRGVVGRQGPEGVAGPDGFPGRDGPAGQQGEQGDDGDPGPVGPAGKRGNPGVA 1504

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGR------DGLPG---EPGLDGIPGRNGMDGIPGKD 223
            G+PG +G  G KG+ G PG++G  G+       GLPG   EPG  G PG +G  G PG  
Sbjct: 1505 GLPGAQGPPGFKGESGLPGQLGPPGKRGTAGGTGLPGNRGEPGSKGQPGDSGEMGFPGMA 1564

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GL G  G PG  G+ G +G  GP G  GK GI G
Sbjct: 1565 GLFGPKGPPGDVGSKGIQGPRGPPGLMGKEGIIG 1598



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 77/145 (53%), Gaps = 9/145 (6%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKG------DM 166
           GP G +G IG  G  G+ G  GE+G PGV G  G  G    PGD G+RGP G      ++
Sbjct: 775 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGEL 834

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PGP+G+PG  G  G  G +GYPG  G+ G  G  G+PGL G  G  G+ G+ G  G  
Sbjct: 835 GLPGPRGVPGLIGDMGALGPIGYPGPKGVKGLMGNVGQPGLKGDKGEQGVPGVSGDPGFQ 894

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRG 251
           G  G  G  G  G +G  GP G  G
Sbjct: 895 GDKGSQGLPGFPGARGKPGPLGKIG 919



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 94/222 (42%), Gaps = 45/222 (20%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            I L  + G   S  E   PG+ G  G+ G  G  G+ G +G  G  G PG +G PGP+G+
Sbjct: 783  IGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGELGLPGPRGV 842

Query: 154  PGDEGKRGPKGDMGYPGPQGIPG------------DEGKRGPKGDMGYPGRIGLDGRDGL 201
            PG  G  G  G +GYPGP+G+ G            D+G++G  G  G PG  G  G  GL
Sbjct: 843  PGLIGDMGALGPIGYPGPKGVKGLMGNVGQPGLKGDKGEQGVPGVSGDPGFQGDKGSQGL 902

Query: 202  PGEPGLDGIPGRNGM---------------------DGIPGKDGLPGKDGIPGTNGTNGE 240
            PG PG  G PG  G                       G PG +G  G  G PG  G  G 
Sbjct: 903  PGFPGARGKPGPLGKIGDKGPLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGP 962

Query: 241  KGMTGPRGN------------RGKSGINGVPGTPAICAYKRE 270
            +G  GP G+             G+ G  G PG P     K E
Sbjct: 963  RGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGPDGVKGE 1004



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 85/172 (49%), Gaps = 24/172 (13%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  GA GE G+ GE G KG  G +GPPG QG+ G  G+ G +GD G  GP G+ GD
Sbjct: 1170 MGPKGPPGAVGEPGLPGEAGMKGDLGPLGPPGEQGLIGQRGEPGLEGDSGPAGPDGLKGD 1229

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
             G  GP G+ G  G+ GL G DG PG PG+ G+    G +G PGK G  G+ G  G  G 
Sbjct: 1230 RGDPGPDGERGDKGQEGLMGEDGPPGPPGITGV---RGPEGKPGKQGEKGRTGAKGAKGY 1286

Query: 238  NGE---------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G+                     +G  GP G  G+ G  G PG      +K
Sbjct: 1287 QGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHK 1338



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 87/196 (44%), Gaps = 42/196 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G +G  G IG  G  GVKG  G  G PG+ G  G QG+PG  G  G +GD G  G 
Sbjct: 843  PGLIGDMGALGPIGYPGPKGVKGLMGNVGQPGLKGDKGEQGVPGVSGDPGFQGDKGSQGL 902

Query: 172  QGIPGDEGKRGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLDGI 210
             G PG  GK GP G                     D+G PG    +G +G+ G+PG  G+
Sbjct: 903  PGFPGARGKPGPLGKIGDKGPLGFPGPPGPEGFPGDIGPPGD---NGPEGMKGKPGARGL 959

Query: 211  PGRNG------------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            PG  G                  ++G PG+ G PG+ G  G  G  G+ G  G  G +G 
Sbjct: 960  PGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGPDGVKGEPGDAGRPGHVGEQGL 1019

Query: 253  SGINGVPGTPAICAYK 268
             G  G+ G P I   K
Sbjct: 1020 LGFIGLVGEPGIMGEK 1035



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 88/198 (44%), Gaps = 45/198 (22%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG----- 152
             + G         P G  GP G KG +G  G+ G+KG++GE+G PGV G PG QG     
Sbjct: 841  GVPGLIGDMGALGPIGYPGPKGVKGLMGNVGQPGLKGDKGEQGVPGVSGDPGFQGDKGSQ 900

Query: 153  ----IPGDEGKRGPKGDMGYP------------------GPQGIPGDEGKRGPKGDMGYP 190
                 PG  GK GP G +G                    GP G  G EG +G  G  G P
Sbjct: 901  GLPGFPGARGKPGPLGKIGDKGPLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLP 960

Query: 191  GRIGLDGRDG------------LPGEPGLDGIPGRNGMDGI---PGKDGLP---GKDGIP 232
            G  G  G +G            L G+PG  G PGR G DG+   PG  G P   G+ G+ 
Sbjct: 961  GPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGPDGVKGEPGDAGRPGHVGEQGLL 1020

Query: 233  GTNGTNGEKGMTGPRGNR 250
            G  G  GE G+ G +G+R
Sbjct: 1021 GFIGLVGEPGIMGEKGDR 1038



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 92/241 (38%), Gaps = 82/241 (34%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L    G         PPG QG IGQ+GE G +G+ G  G  G KG     G PGP G  G
Sbjct: 1184 LPGEAGMKGDLGPLGPPGEQGLIGQRGEPGLEGDSGPAGPDGLKGD---RGDPGPDGERG 1240

Query: 156  DEGKRGPKGD---------MGYPGPQGIPGDEGKR---GPKGDMGYPGRI---------- 193
            D+G+ G  G+          G  GP+G PG +G++   G KG  GY G++          
Sbjct: 1241 DKGQEGLMGEDGPPGPPGITGVRGPEGKPGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPG 1300

Query: 194  -----------------GLDGRDGLPGEPGLDGIPGRNGM-------------------- 216
                             G  GR G  GEPGL G  G  G+                    
Sbjct: 1301 PPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIMGPLGPPGPKGEKGEQGEDG 1360

Query: 217  --------------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                                 G PG  G PG++G+PG  G  G++G+ G  G RG+ G  
Sbjct: 1361 KAEGPPGPPGDRGSVGDRGDRGEPGDPGYPGQEGVPGLRGDPGQQGLPGHPGPRGRPGPK 1420

Query: 257  G 257
            G
Sbjct: 1421 G 1421



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 89/221 (40%), Gaps = 67/221 (30%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 1182 PGLPGEAGMKGDLGPLGPPGEQGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDGERGD 1241

Query: 169  PGPQGIPGDE---------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLD----------- 208
             G +G+ G++         G RGP+G    PG+ G  GR G  G  G             
Sbjct: 1242 KGQEGLMGEDGPPGPPGITGVRGPEGK---PGKQGEKGRTGAKGAKGYQGQLGEMGVPGD 1298

Query: 209  -------------------GIPGRNGMDGIPGKDGLPGKDGI------------PGTNGT 237
                               G PGR G  G PG  G  G  GI             G  G 
Sbjct: 1299 PGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIMGPLGPPGPKGEKGEQGE 1358

Query: 238  NG----------EKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +G          ++G  G RG+RG+ G  G PG   +   +
Sbjct: 1359 DGKAEGPPGPPGDRGSVGDRGDRGEPGDPGYPGQEGVPGLR 1399



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 92/240 (38%), Gaps = 85/240 (35%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVGPP-------- 148
            QG      E   PGL+G  G  G  G KG+    G  GERG+KG  G++G          
Sbjct: 1203 QGLIGQRGE---PGLEGDSGPAGPDGLKGDRGDPGPDGERGDKGQEGLMGEDGPPGPPGI 1259

Query: 149  ----GPQGIPGDEGKRGPKGDMGYPGPQGIPGD---------------EGKRGPKGDMGY 189
                GP+G PG +G++G  G  G  G QG  G+               +G RG  G  G 
Sbjct: 1260 TGVRGPEGKPGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGA 1319

Query: 190  PGRIGLDGRDGLP----------------------------------------------- 202
            PGR+G  G  GL                                                
Sbjct: 1320 PGRMGAQGEPGLAGYDGHKGIMGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGSVGDRG 1379

Query: 203  --GEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GEPG  G PG+ G+ G+   PG+ GLPG  G  G  G  G KG  GP+G  GK+G  G
Sbjct: 1380 DRGEPGDPGYPGQEGVPGLRGDPGQQGLPGHPGPRGRPGPKGSKGEEGPKGKHGKAGAPG 1439



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 51/93 (54%), Gaps = 12/93 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G  G  G +GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 1524 QLGPPGKRGTAGGTGLPGNRGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDVGSKGIQG 1583

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMG 188
             RGP G MG     GP GI G  G+ GPKGD G
Sbjct: 1584 PRGPPGLMGKEGIIGPLGILGPSGRPGPKGDKG 1616


>gi|296198529|ref|XP_002806757.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(IX) chain
           [Callithrix jacchus]
          Length = 931

 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/186 (45%), Positives = 105/186 (56%), Gaps = 24/186 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIG 194
           A G+ G PGPQGIPG   D+G+RGP G++G  G    QG+ G  G  GPKGD G     G
Sbjct: 485 ARGLDGEPGPQGIPGASGDQGQRGPPGEVGPKGDRGAQGVRGIPGLPGPKGDTGL---AG 541

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           +DGRDG+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G+ G
Sbjct: 542 VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMG 601

Query: 255 INGVPG 260
            +G PG
Sbjct: 602 NSGKPG 607



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/184 (44%), Positives = 101/184 (54%), Gaps = 21/184 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 426 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 485

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQGIPG   D+G+RGP G++G  G  G  G  G+PG PG  G  G  G+DG 
Sbjct: 486 RGLDGEPGPQGIPGASGDQGQRGPPGEVGPKGDRGAQGVRGIPGLPGPKGDTGLAGVDG- 544

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
                   +DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  S     +
Sbjct: 545 --------RDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGK 596

Query: 280 TSQL 283
             Q+
Sbjct: 597 PGQM 600



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 64/115 (55%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  GIPG +G  G++   G  GP+G+RG  G+ G+PG P 
Sbjct: 478 GDKGEKGARGLDGEPGPQGIPGASGDQGQRGPPGEVGPKGDRGAQGVRGIPGLPG 532



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 82/159 (51%), Gaps = 12/159 (7%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G+ G  G +G+ G  GE+G KG+RG +G          +GIPG  G +G  G  G
Sbjct: 491 EPGPQGIPGASGDQGQRGPPGEVGPKGDRGAQGV---------RGIPGLPGPKGDTGLAG 541

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G  G
Sbjct: 542 VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMG 601

Query: 228 KDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 602 NSGKPGQQGPPGEVGPRGPRGLPGSRGEMGPVGSPGLPG 640



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 83/160 (51%), Gaps = 27/160 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GP+
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPR 621

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PG+                   G+ G  G+ GEPG  G  G +
Sbjct: 622 GLPGSRGEMGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGIVGEPGPKGEQGAS 681

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRG 251
           G +G  GK G  G  G+PG  G+    GE G+ GP G+RG
Sbjct: 682 GEEGEAGKRGELGDIGLPGPKGSAGNPGEPGLRGPEGSRG 721



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 80/176 (45%), Gaps = 54/176 (30%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------ 162
           PG +G  G+KG  GA G   +MG  G+ G++G PG VGP GP+G+PG  G+ GP      
Sbjct: 579 PGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPRGLPGSRGEMGPVGSPGL 638

Query: 163 ------------------------KGD---MGYPGP---QGIPGDEGKRGPKGDMGYPGR 192
                                   KGD   +G PGP   QG  G+EG+ G +G++G  G 
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGIVGEPGPKGEQGASGEEGEAGKRGELGDIGL 698

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
            G  G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 PGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 70/154 (45%), Gaps = 44/154 (28%)

Query: 104 NSTK--EYCPPGLQGPIGQKGEIGAKGEMG------------------------------ 131
           NS K  +  PPG  GP G +G  G++GEMG                              
Sbjct: 602 NSGKPGQQGPPGEVGPRGPRGLPGSRGEMGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPG 661

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMG 188
           +KG+RG  G PG  G  G  G  G+ GKRG  GD+G PGP+G    PG+ G RGP+G  G
Sbjct: 662 MKGDRGIVGEPGPKGEQGASGEEGEAGKRGELGDIGLPGPKGSAGNPGEPGLRGPEGSRG 721

Query: 189 Y---------PGRIGLDGRDGLPGEPGLDGIPGR 213
                     PG  G+ G  G  G PG+ G PGR
Sbjct: 722 LPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGR 755



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 50/91 (54%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGD+G  G +G PG    RGPKG    PG IG
Sbjct: 812 QMGIRGLPGIKGPPGALGL------RGPKGDLGEKGERGPPG----RGPKG---LPGAIG 858

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L      PG+PG     GRNG DG  G  G+
Sbjct: 859 L------PGDPGPASY-GRNGHDGERGPPGV 882



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           +MG++G  G KG PG +G  GP+G  G++G+RGP G     GP+G+PG  G  G  G   
Sbjct: 812 QMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGR----GPKGLPGAIGLPGDPGPAS 867

Query: 189 YPGRIGLDGRDGLPG 203
           Y GR G DG  G PG
Sbjct: 868 Y-GRNGHDGERGPPG 881



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 42/85 (49%), Gaps = 17/85 (20%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG +G PG  G RGPKGD+G               E G  G PGR G  G+PG  
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDLG---------------EKGERGPPGR-GPKGLPGAI 857

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRG 248
           GLPG  G P + G NG  G  GP G
Sbjct: 858 GLPGDPG-PASYGRNGHDGERGPPG 881


>gi|405978684|gb|EKC43054.1| Collagen alpha-1(IV) chain [Crassostrea gigas]
          Length = 1630

 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 97/174 (55%), Gaps = 20/174 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PGL+G  G+ G  G  G  G+KGERG  G PG  GP G  G  GD G  GP G  G+   
Sbjct: 688 PGLKGDRGEPGLPGVNGLPGMKGERGFDGIPGEAGPRGLPGPRGDRGSDGPSGSPGFDGR 747

Query: 169 ---PGPQGIPGDEG-----------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
              PGPQG+PG +G            RG KGD G PGR GL G+ GLPG+   DG+PG++
Sbjct: 748 PGEPGPQGLPGVKGDSGLPGRDGLSSRGEKGDSGLPGRPGLQGQPGLPGQ---DGVPGQD 804

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+ G+ G  G  G  G+PG+ G  GE G+ GP G RG  G +G PG P +   K
Sbjct: 805 GLPGMKGDTGPSGLPGLPGSPGLKGEPGIEGPEGTRGTPGEDGRPGLPGVVGAK 858



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/183 (43%), Positives = 100/183 (54%), Gaps = 30/183 (16%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG++G +GQ+G  G    KGE G  G  G+ G PG  G PG +G PG  G  G  G  G 
Sbjct: 1040 PGMKGELGQQGLPGFPGMKGERGFPGPAGQNGIPGNDGLPGMKGNPGFNGNPGRAGLKGE 1099

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------------GR 213
            PG  GIPG E   GPKG+ G PG  G  G +GL GEPGL+G+P               GR
Sbjct: 1100 PGLNGIPGRE---GPKGEAGLPGVPGERGPEGLKGEPGLNGLPGSPGVAGLPGMKGDRGR 1156

Query: 214  NGMDGIPGK---DGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            +G++G+PG     GLPG+DGI      PG  G  G +G+ G +G RG+ G+ GVPG P  
Sbjct: 1157 DGVNGLPGPKGDSGLPGRDGIKGERGSPGFPGPEGREGLPGMKGERGEQGLTGVPGEPGQ 1216

Query: 265  CAY 267
              +
Sbjct: 1217 PGF 1219



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 97/183 (53%), Gaps = 31/183 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQG  G  G  G KGE G  G  G  G PG  G PG   +PG +G +GP G +G PG 
Sbjct: 969  PGLQGVPGNDGLPGVKGESGRPGSPGSPGQPGQDGLPG---LPGMKGDQGPTG-VGIPGE 1024

Query: 172  QGIPGDEGKRGP---------------------KGDMGYPG---RIGLDGRDGLPG---E 204
             GIPG+ G+ G                      KG+ G+PG   + G+ G DGLPG    
Sbjct: 1025 SGIPGERGRDGAPGLPGMKGELGQQGLPGFPGMKGERGFPGPAGQNGIPGNDGLPGMKGN 1084

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PG +G PGR G+ G PG +G+PG++G  G  G  G  G  GP G +G+ G+NG+PG+P +
Sbjct: 1085 PGFNGNPGRAGLKGEPGLNGIPGREGPKGEAGLPGVPGERGPEGLKGEPGLNGLPGSPGV 1144

Query: 265  CAY 267
               
Sbjct: 1145 AGL 1147



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/160 (46%), Positives = 95/160 (59%), Gaps = 19/160 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYP 169
            G QGP G    +G  GE G+ GERG  GAPG+ G  G    QG+PG  G    KG+ G+P
Sbjct: 1012 GDQGPTG----VGIPGESGIPGERGRDGAPGLPGMKGELGQQGLPGFPGM---KGERGFP 1064

Query: 170  GPQG---IPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            GP G   IPG++G  G KG+ G+   PGR GL G  GL G PG +G  G  G+ G+PG+ 
Sbjct: 1065 GPAGQNGIPGNDGLPGMKGNPGFNGNPGRAGLKGEPGLNGIPGREGPKGEAGLPGVPGER 1124

Query: 224  GLPGKDGIPGTN---GTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G PG N   G+ G  G+ G +G+RG+ G+NG+PG
Sbjct: 1125 GPEGLKGEPGLNGLPGSPGVAGLPGMKGDRGRDGVNGLPG 1164



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/187 (42%), Positives = 92/187 (49%), Gaps = 27/187 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPKGD 165
           PG  G  G KG+ G  G  G+ G  G KG PG+ GP G +G PG++G+       G KG 
Sbjct: 801 PGQDGLPGMKGDTGPSGLPGLPGSPGLKGEPGIEGPEGTRGTPGEDGRPGLPGVVGAKGT 860

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD------------GRDGLP---GEPGLDGI 210
            G PG  G+ G  G+RG  G  G PG  GLD            GRDG P   GEPG  GI
Sbjct: 861 PGLPGADGLSGIPGERGEAGFPGQPGAPGLDGPQGPPGLPGERGRDGSPGPKGEPGFVGI 920

Query: 211 PGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PG  G DG PG  GL G        GIPG  G +GE G  G  G  G  G+ GVPG   +
Sbjct: 921 PGEPGRDGNPGLPGLQGMKGERGFPGIPGEQGRSGEPGQKGDTGPSGLPGLQGVPGNDGL 980

Query: 265 CAYKRES 271
              K ES
Sbjct: 981 PGVKGES 987



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 96/172 (55%), Gaps = 19/172 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G+ G  G  G  G++G +GE+G PG+   PG QG  G+ G++G  G  G PG 
Sbjct: 915  PGFVGIPGEPGRDGNPGLPGLQGMKGERGFPGI---PGEQGRSGEPGQKGDTGPSGLPGL 971

Query: 172  QGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP-- 226
            QG+PG++G  G KG+ G    PG  G  G+DGLPG PG+ G  G  G+ GIPG+ G+P  
Sbjct: 972  QGVPGNDGLPGVKGESGRPGSPGSPGQPGQDGLPGLPGMKGDQGPTGV-GIPGESGIPGE 1030

Query: 227  -GKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G+DG PG  G  GE          GM G RG  G +G NG+PG   +   K
Sbjct: 1031 RGRDGAPGLPGMKGELGQQGLPGFPGMKGERGFPGPAGQNGIPGNDGLPGMK 1082



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 91/183 (49%), Gaps = 14/183 (7%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +GF     E  P GL GP G +G  G  G  G  G  GE G  G+ G  G  G+PG
Sbjct: 708 MKGERGFDGIPGEAGPRGLPGPRGDRGSDGPSGSPGFDGRPGEPGPQGLPGVKGDSGLPG 767

Query: 156 DEG--KRGPKGDMGYPG------------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G   RG KGD G PG              G+PG +G  G KGD G  G  GL G  GL
Sbjct: 768 RDGLSSRGEKGDSGLPGRPGLQGQPGLPGQDGVPGQDGLPGMKGDTGPSGLPGLPGSPGL 827

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            GEPG++G  G  G  G  G+ GLPG  G  GT G  G  G++G  G RG++G  G PG 
Sbjct: 828 KGEPGIEGPEGTRGTPGEDGRPGLPGVVGAKGTPGLPGADGLSGIPGERGEAGFPGQPGA 887

Query: 262 PAI 264
           P +
Sbjct: 888 PGL 890



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 106/208 (50%), Gaps = 18/208 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------K 159
           PGL G IG KG  G    +G+ G  GE+G PG  G PG  G+ GD+G             
Sbjct: 611 PGLPGLIGPKGNPG----IGLPGIPGERGIPGDNGLPGLNGMKGDKGIPGETINVNVDLL 666

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G KG+ G+PG  GIPG +G  G KGD G PG  G++G  G+ GE G DGIPG  G  G+
Sbjct: 667 KGTKGEPGFPGNPGIPGRDGLPGLKGDRGEPGLPGVNGLPGMKGERGFDGIPGEAGPRGL 726

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
           PG  G  G DG  G+ G +G  G  GP+G  G  G +G+PG   + +   +  S LP   
Sbjct: 727 PGPRGDRGSDGPSGSPGFDGRPGEPGPQGLPGVKGDSGLPGRDGLSSRGEKGDSGLPGRP 786

Query: 280 TSQLLIPPTIVGSEHIFSSSPIVVREGD 307
             Q    P + G + +     +   +GD
Sbjct: 787 GLQGQ--PGLPGQDGVPGQDGLPGMKGD 812



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 105/205 (51%), Gaps = 31/205 (15%)

Query: 112  PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---------GDEGK 159
            PGL G +G KG     GA G  G+ GERGE G PG  G PG  G           G +G 
Sbjct: 849  PGLPGVVGAKGTPGLPGADGLSGIPGERGEAGFPGQPGAPGLDGPQGPPGLPGERGRDGS 908

Query: 160  RGPKGDMGY------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE--------- 204
             GPKG+ G+      PG  G PG  G +G KG+ G+PG  G  GR G PG+         
Sbjct: 909  PGPKGEPGFVGIPGEPGRDGNPGLPGLQGMKGERGFPGIPGEQGRSGEPGQKGDTGPSGL 968

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PGL G+PG +G+ G+ G+ G PG  G PG  G +G  G+ G +G++G +G+ G+PG   I
Sbjct: 969  PGLQGVPGNDGLPGVKGESGRPGSPGSPGQPGQDGLPGLPGMKGDQGPTGV-GIPGESGI 1027

Query: 265  CAYK-RESCSLLPN--SETSQLLIP 286
               + R+    LP    E  Q  +P
Sbjct: 1028 PGERGRDGAPGLPGMKGELGQQGLP 1052



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/164 (44%), Positives = 89/164 (54%), Gaps = 15/164 (9%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G  G  G  G  G+KGE G  G PG  GP G  G+PG  G+RGP+G  G PG  
Sbjct: 1077 GLPGMKGNPGFNGNPGRAGLKGEPGLNGIPGREGPKGEAGLPGVPGERGPEGLKGEPGLN 1136

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG---KD 229
            G+PG  G  G  G  G  GR   DG +GLPG  G  G+PGR+G+ G  G  G PG   ++
Sbjct: 1137 GLPGSPGVAGLPGMKGDRGR---DGVNGLPGPKGDSGLPGRDGIKGERGSPGFPGPEGRE 1193

Query: 230  GIPGTNGTNGEKGMTGPRGN---------RGKSGINGVPGTPAI 264
            G+PG  G  GE+G+TG  G          +G SG  GVPG P +
Sbjct: 1194 GLPGMKGERGEQGLTGVPGEPGQPGFPGLKGDSGDRGVPGLPGL 1237



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 97/176 (55%), Gaps = 28/176 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQG  G++G  G  GE G  GE G+KG  G  G PG QG+PG++G  G KG+ G PG 
Sbjct: 933  PGLQGMKGERGFPGIPGEQGRSGEPGQKGDTGPSGLPGLQGVPGNDGLPGVKGESGRPGS 992

Query: 172  QGIPGDEGKRG----P--KGDMGYPGRIGLDGRDGLPGEPGLD---GIP------GRNGM 216
             G PG  G+ G    P  KGD G P  +G+ G  G+PGE G D   G+P      G+ G+
Sbjct: 993  PGSPGQPGQDGLPGLPGMKGDQG-PTGVGIPGESGIPGERGRDGAPGLPGMKGELGQQGL 1051

Query: 217  DGIP------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G P            G++G+PG DG+PG  G  G  G  G  G +G+ G+NG+PG
Sbjct: 1052 PGFPGMKGERGFPGPAGQNGIPGNDGLPGMKGNPGFNGNPGRAGLKGEPGLNGIPG 1107



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/128 (44%), Positives = 75/128 (58%), Gaps = 18/128 (14%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
           GE+G +G PG +GPPGPQG+             GYPG +G+PG +G++G  G +G  G  
Sbjct: 69  GEKGSRGVPGALGPPGPQGL------------RGYPGMEGLPGQKGQKGESGPLGPLGPK 116

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G+ G+PG PG++GIP      GIPG  G  G  G+ G NGT GE G++G  G  G  
Sbjct: 117 GDRGKMGMPGFPGINGIP------GIPGPAGPRGPAGMDGCNGTQGEPGISGFNGQPGAI 170

Query: 254 GINGVPGT 261
           G  G+PGT
Sbjct: 171 GPPGLPGT 178



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 96/210 (45%), Gaps = 36/210 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G+ G  G  GE G +G +GE G  G+ G PG  G+PG +G RG  G  G PGP
Sbjct: 1106 PGREGPKGEAGLPGVPGERGPEGLKGEPGLNGLPGSPGVAGLPGMKGDRGRDGVNGLPGP 1165

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------EPGLDGIPGRNGMDGIPGKDGL 225
            +G  G  G+ G KG+ G PG  G +GR+GLPG      E GL G+PG  G  G PG  G 
Sbjct: 1166 KGDSGLPGRDGIKGERGSPGFPGPEGREGLPGMKGERGEQGLTGVPGEPGQPGFPGLKGD 1225

Query: 226  PGKDGIPGTNGTN------------------------------GEKGMTGPRGNRGKSGI 255
             G  G+PG  G                                G  G  G +G RG SG+
Sbjct: 1226 SGDRGVPGLPGLQGMPGPEGPPGEPGVPGSPGLPGLKGDAGLPGRDGFEGIKGERGPSGL 1285

Query: 256  NGVPGTPAICAYKRESCSLLPNSETSQLLI 285
             G  G      +  E  S+ P + T  + I
Sbjct: 1286 PGAMGFKGDRGFPGEKGSIGPQASTKGMRI 1315



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 95/189 (50%), Gaps = 41/189 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG------------ERGEKGAPGVVGPPGPQGIPGDEGK- 159
            GL G  G++GE G  G+ G  G            ERG  G+PG  G PG  GIPG+ G+ 
Sbjct: 868  GLSGIPGERGEAGFPGQPGAPGLDGPQGPPGLPGERGRDGSPGPKGEPGFVGIPGEPGRD 927

Query: 160  --------RGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG----- 203
                    +G KG+ G+PG    QG  G+ G++G  G  G PG  G+ G DGLPG     
Sbjct: 928  GNPGLPGLQGMKGERGFPGIPGEQGRSGEPGQKGDTGPSGLPGLQGVPGNDGLPGVKGES 987

Query: 204  -EPGLDGIPGRNGMDGIPGKDGL-----------PGKDGIPGTNGTNGEKGMTGPRGNRG 251
              PG  G PG+ G DG+PG  G+           PG+ GIPG  G +G  G+ G +G  G
Sbjct: 988  GRPGSPGSPGQPGQDGLPGLPGMKGDQGPTGVGIPGESGIPGERGRDGAPGLPGMKGELG 1047

Query: 252  KSGINGVPG 260
            + G+ G PG
Sbjct: 1048 QQGLPGFPG 1056



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 80/152 (52%), Gaps = 9/152 (5%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           +GE G  G  G  G +G+ G PG  G PG  G+PG +G  GP G  G PG  G+ G+ G 
Sbjct: 774 RGEKGDSGLPGRPGLQGQPGLPGQDGVPGQDGLPGMKGDTGPSGLPGLPGSPGLKGEPGI 833

Query: 181 RGPKGDMGYPGR---------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            GP+G  G PG          +G  G  GLPG  GL GIPG  G  G PG+ G PG DG 
Sbjct: 834 EGPEGTRGTPGEDGRPGLPGVVGAKGTPGLPGADGLSGIPGERGEAGFPGQPGAPGLDGP 893

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  GE+G  G  G +G+ G  G+PG P 
Sbjct: 894 QGPPGLPGERGRDGSPGPKGEPGFVGIPGEPG 925



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 95/188 (50%), Gaps = 36/188 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ G  G KG+ G  G  G+KGERG   +PG  GP G +G+PG +G+RG +G  G PG  
Sbjct: 1158 GVNGLPGPKGDSGLPGRDGIKGERG---SPGFPGPEGREGLPGMKGERGEQGLTGVPGEP 1214

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLD---------------GRDGLPGEPGLDGIPGRNGMD 217
            G PG  G +G  GD G PG  GL                G  GLPG  G  G+PGR+G +
Sbjct: 1215 GQPGFPGLKGDSGDRGVPGLPGLQGMPGPEGPPGEPGVPGSPGLPGLKGDAGLPGRDGFE 1274

Query: 218  GIPGK---DGLPGKDGIPGTNGTNGEKGMTGPR---------------GNRGKSGINGVP 259
            GI G+    GLPG  G  G  G  GEKG  GP+               G+RG++G  G+P
Sbjct: 1275 GIKGERGPSGLPGAMGFKGDRGFPGEKGSIGPQASTKGMRIKGEKGETGDRGRAGFPGLP 1334

Query: 260  GTPAICAY 267
            G+     +
Sbjct: 1335 GSKGDAGF 1342



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 74/135 (54%), Gaps = 15/135 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PGL+G  G  G  G +G   +KGERG  G PG +G  G +G PG++G  GP         
Sbjct: 1259 PGLKGDAGLPGRDGFEG---IKGERGPSGLPGAMGFKGDRGFPGEKGSIGPQASTKGMRI 1315

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            KG+ G  G +G  G  G  G KGD G+PG  G     G+PGE G+ G PG  G  G PG+
Sbjct: 1316 KGEKGETGDRGRAGFPGLPGSKGDAGFPGPKGF---PGIPGERGVQGFPGMKGESGFPGQ 1372

Query: 223  DGLPGKDGIPGTNGT 237
             G+PG+DG PG  G 
Sbjct: 1373 PGIPGEDGFPGAQGA 1387



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 110/266 (41%), Gaps = 98/266 (36%)

Query: 103 CNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGD 156
           C+STKE    G     GP G KGE G  G  G  G  GEKG PG+ GP G +   G+PG 
Sbjct: 267 CDSTKEELQQGNLTQTGPKGNKGERGYSGMKGPPGMDGEKGVPGIAGPRGDRGMDGLPGL 326

Query: 157 EGKRGPKGDMGYPGPQGIPG------------------DEGKRGPKGDMGYP-------- 190
            G +G KG+ G PG +G  G                   +G+RGP G+ GYP        
Sbjct: 327 NGIQGEKGNPGVPGVKGEKGYQGPPGPSGGEGGDGPEGPKGERGPSGERGYPGLDGLMGL 386

Query: 191 ----------------------------------GRIGLDGRDGLPGEPGLDG------- 209
                                             G  GL G DGL G+PGL G       
Sbjct: 387 PGSPGRPGPQGGPGTQGLPGPEGPPGPKGNKGDKGNSGLPGIDGLSGQPGLPGEKGNPGP 446

Query: 210 -------IPGRNGMDGIPGKDGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKS 253
                  IPG  G +G+PG+DGLPG+          GIPG N T G  G+ GP+G++G  
Sbjct: 447 KGNAGVSIPGVKGANGLPGRDGLPGRKGETGFTGLPGIPG-NSTRGRPGLPGPKGSKGNP 505

Query: 254 GINGVPGTPAICAYKRESCSLLPNSE 279
           G  GV G        RE    LP ++
Sbjct: 506 GFPGVSG--------REGLPGLPGAK 523



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 85/168 (50%), Gaps = 41/168 (24%)

Query: 131 GVKGERGEKGA------------------------PGVVGPPGPQGI--PGDEGKRGPKG 164
           G +G RG  G+                        PG++GP G  GI  PG  G+RG  G
Sbjct: 579 GPQGPRGIDGSPGLPGLKGDRGVDGRDGLPGNPGLPGLIGPKGNPGIGLPGIPGERGIPG 638

Query: 165 DMGYPGPQGIPGDEG------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           D G PG  G+ GD+G             +G KG+ G+PG  G+ GRDGLPG  G  G PG
Sbjct: 639 DNGLPGLNGMKGDKGIPGETINVNVDLLKGTKGEPGFPGNPGIPGRDGLPGLKGDRGEPG 698

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G++G+PG  G  G DGIPG  G    +G+ GPRG+RG  G +G PG
Sbjct: 699 LPGVNGLPGMKGERGFDGIPGEAGP---RGLPGPRGDRGSDGPSGSPG 743



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 94/208 (45%), Gaps = 46/208 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  GQ G  G KG  G KG  G    PGV G     G+PG +G  G KG+ G+ G 
Sbjct: 426 PGIDGLSGQPGLPGEKGNPGPKGNAGVS-IPGVKGA---NGLPGRDGLPGRKGETGFTGL 481

Query: 172 QGIPGDE-----GKRGPKGDMGYPGRIGLDGRDGLPGEPG--------LDGIPGRNGMDG 218
            GIPG+      G  GPKG  G PG  G+ GR+GLPG PG        L G+PGR+G  G
Sbjct: 482 PGIPGNSTRGRPGLPGPKGSKGNPGFPGVSGREGLPGLPGAKGKFFGGLPGVPGRDGFKG 541

Query: 219 IPGK-----------------------------DGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             G+                             +GLPG  G  G +G+ G  G+ G RG 
Sbjct: 542 DKGEPYKLESESFKDMCRKGEPGLPGPPGEQGLNGLPGPQGPRGIDGSPGLPGLKGDRGV 601

Query: 250 RGKSGINGVPGTPAICAYKRESCSLLPN 277
            G+ G+ G PG P +   K      LP 
Sbjct: 602 DGRDGLPGNPGLPGLIGPKGNPGIGLPG 629



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 87/188 (46%), Gaps = 43/188 (22%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEI-------GAKGEMGVKGERGEKGAPGVVGPPGP 150
            + GF        PPGL G  G+KGE        G KGE G++G +G +G PG  GP G 
Sbjct: 159 GISGFNGQPGAIGPPGLPGTKGEKGEPSVGVAIKGQKGEPGIEGFQGLQGPPGRDGPSGL 218

Query: 151 QGIPGDEGKR------GPKGDMGYP--GPQGIPGDEGK---------------------- 180
            G+ G EG R      G KG+ G P  G  G  GD+G+                      
Sbjct: 219 PGLTGPEGPRGYDGLIGMKGEAGNPGLGKNGQKGDQGEIGSPGPPGPPCDSTKEELQQGN 278

Query: 181 ------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
                 +G KG+ GY G  G  G DG  G PG+ G  G  GMDG+PG +G+ G+ G PG 
Sbjct: 279 LTQTGPKGNKGERGYSGMKGPPGMDGEKGVPGIAGPRGDRGMDGLPGLNGIQGEKGNPGV 338

Query: 235 NGTNGEKG 242
            G  GEKG
Sbjct: 339 PGVKGEKG 346



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 71/138 (51%), Gaps = 16/138 (11%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           KG++G  G PG+ G  G  G+PG++G  GPKG+ G      IPG       KG  G PGR
Sbjct: 417 KGDKGNSGLPGIDGLSGQPGLPGEKGNPGPKGNAGVS----IPGV------KGANGLPGR 466

Query: 193 IGLDGRDGLPGEPGLDGIPGRN--GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            GL GR G  G  GL GIPG +  G  G+PG  G  G  G PG +G  G  G+ G +G  
Sbjct: 467 DGLPGRKGETGFTGLPGIPGNSTRGRPGLPGPKGSKGNPGFPGVSGREGLPGLPGAKGKF 526

Query: 251 GKSGINGVPGTPAICAYK 268
                 G+PG P    +K
Sbjct: 527 ----FGGLPGVPGRDGFK 540



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 64/133 (48%), Gaps = 24/133 (18%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPG 143
            L    GF     E  P GL G +G KG+ G  GE G            +KGE+GE G  G
Sbjct: 1267 LPGRDGFEGIKGERGPSGLPGAMGFKGDRGFPGEKGSIGPQASTKGMRIKGEKGETGDRG 1326

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
              G PG   +PG       KGD G+PGP+G PG  G+RG     G+PG  G  G  G PG
Sbjct: 1327 RAGFPG---LPGS------KGDAGFPGPKGFPGIPGERG---VQGFPGMKGESGFPGQPG 1374

Query: 204  EPGLDGIPGRNGM 216
             PG DG PG  G 
Sbjct: 1375 IPGEDGFPGAQGA 1387



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 86/198 (43%), Gaps = 54/198 (27%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
            P G +G  G KGE G +G  GV GE G+ G PG+ G  G +G+PG  G +          
Sbjct: 1189 PEGREGLPGMKGERGEQGLTGVPGEPGQPGFPGLKGDSGDRGVPGLPGLQGMPGPEGPPG 1248

Query: 161  -----------GPKGDMGYPGPQGIPGDEGKRGP---------KGDMGYPG--------- 191
                       G KGD G PG  G  G +G+RGP         KGD G+PG         
Sbjct: 1249 EPGVPGSPGLPGLKGDAGLPGRDGFEGIKGERGPSGLPGAMGFKGDRGFPGEKGSIGPQA 1308

Query: 192  -----RI-GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                 RI G  G  G  G  G  G+PG  G  G PG  G P   GIPG  G  G  GM  
Sbjct: 1309 STKGMRIKGEKGETGDRGRAGFPGLPGSKGDAGFPGPKGFP---GIPGERGVQGFPGM-- 1363

Query: 246  PRGNRGKSGINGVPGTPA 263
                +G+SG  G PG P 
Sbjct: 1364 ----KGESGFPGQPGIPG 1377



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 51/105 (48%), Gaps = 6/105 (5%)

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G+PG  G  GP+G  GYPG       +GLPG+ G  G  G  G  G  G  G  G  G 
Sbjct: 74  RGVPGALGPPGPQGLRGYPGM------EGLPGQKGQKGESGPLGPLGPKGDRGKMGMPGF 127

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           PG NG  G  G  GPRG  G  G NG  G P I  +  +  ++ P
Sbjct: 128 PGINGIPGIPGPAGPRGPAGMDGCNGTQGEPGISGFNGQPGAIGP 172


>gi|313227207|emb|CBY22354.1| unnamed protein product [Oikopleura dioica]
          Length = 518

 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 89/156 (57%), Gaps = 29/156 (18%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG--DEGKRGPKGDMGYPGPQ 172
           +G  G  GE G KG+ G +G  GE+G PG +GP G QG PG  + G+RGP          
Sbjct: 174 KGDAGIPGEQGRKGDEGPRGPSGEQGNPGPIGPDGLQGPPGIGERGQRGP---------- 223

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---- 228
             PGDEG++GP G MG  G+ GLDG+ GLPGE GL G  G  G+DG+ G+DGLPG+    
Sbjct: 224 --PGDEGQQGPPGPMGLHGQAGLDGKPGLPGEQGLKGAIGAEGLDGLDGQDGLPGERGPR 281

Query: 229 -----------DGIPGTNGTNGEKGMTGPRGNRGKS 253
                      +G+PG NG NG+ G  G +G  G S
Sbjct: 282 GDIGPPGKPGANGMPGANGINGKPGERGGQGPMGDS 317



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 95/205 (46%), Gaps = 69/205 (33%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG-----ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           G +GP G++G  G  G  G++G     ERG++G             PGDEG++GP G MG
Sbjct: 190 GPRGPSGEQGNPGPIGPDGLQGPPGIGERGQRGP------------PGDEGQQGPPGPMG 237

Query: 168 YPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------PGLDGIPG 212
             G  G+   PG  G++G KG +G  G  GLDG+DGLPGE            PG +G+PG
Sbjct: 238 LHGQAGLDGKPGLPGEQGLKGAIGAEGLDGLDGQDGLPGERGPRGDIGPPGKPGANGMPG 297

Query: 213 RNGMDGIPGK---------------------------------DGLPGKDGIPGTNGTNG 239
            NG++G PG+                                  G  GKDG+ G +G NG
Sbjct: 298 ANGINGKPGERGGQGPMGDSGGRGLPGLPGPVGPEGAVGEPGCKGEDGKDGLKGESGLNG 357

Query: 240 EK----GMTGPRGNRGKSGINGVPG 260
           +     G  GPRG  G+ G  G PG
Sbjct: 358 QSSTRAGPIGPRGAPGEKGDQGAPG 382



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 72/168 (42%), Gaps = 54/168 (32%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG------APGVVGPPGPQGI---PGDEGKRGPK 163
           GL+G IG +G  G  G+ G+ GERG +G       PG  G PG  GI   PG+ G +GP 
Sbjct: 255 GLKGAIGAEGLDGLDGQDGLPGERGPRGDIGPPGKPGANGMPGANGINGKPGERGGQGPM 314

Query: 164 GD------------------MGYPGPQGIPGDEGKRGP---------------------- 183
           GD                  +G PG +G  G +G +G                       
Sbjct: 315 GDSGGRGLPGLPGPVGPEGAVGEPGCKGEDGKDGLKGESGLNGQSSTRAGPIGPRGAPGE 374

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           KGD G PG IG+ G  G  GEPG    PG  G+  I G  G  G+ G+
Sbjct: 375 KGDQGAPG-IGIQGEVGPQGEPGF---PGEAGLS-IKGDVGATGEAGV 417


>gi|449283621|gb|EMC90226.1| Collagen alpha-1(XXI) chain [Columba livia]
          Length = 911

 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/133 (45%), Positives = 74/133 (55%), Gaps = 6/133 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G+ G  G PG  G PG +G PG +G +G +G  G+PG  G+P  +G+RGPKGD G P
Sbjct: 464 GYPGQPGPDGKPGPRGLPGIKGEPGKDGAKGDRGLPGFPGLHGMPAPKGERGPKGDQGVP 523

Query: 191 G------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G        G  G+DGLPG PG  G  G+ G  G+ G  G PG  GIPG  G  G+KG  
Sbjct: 524 GIYGKKANPGRSGKDGLPGSPGFKGEVGQPGPPGLEGHRGEPGIPGIPGNQGAKGQKGEI 583

Query: 245 GPRGNRGKSGING 257
           GP G  G  G  G
Sbjct: 584 GPPGQPGAKGSTG 596



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 89/178 (50%), Gaps = 17/178 (9%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     +  PPGL+G  G+ G  G  G  G KG++GE G PG    PG +G  GD G  
Sbjct: 545 GFKGEVGQPGPPGLEGHRGEPGIPGIPGNQGAKGQKGEIGPPGQ---PGAKGSTGDTGLM 601

Query: 161 GPKGDMGYPGPQGIPGDEGK---------RGPKGDMGYPGRIG-----LDGRDGLPGEPG 206
           GP+G  G PG  G  GD+G+          G KGD+G PG        L G  G  GE G
Sbjct: 602 GPEGSFGLPGAPGPKGDKGEPGIQGKPGSSGAKGDLGVPGAPDFSSNILQGDKGNQGESG 661

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           + G+ G  G  G PG  G+ G  G  G  G  G+ G+ G  G +G+SGI G+ G P +
Sbjct: 662 IQGLKGEKGRQGNPGLQGVEGPSGEQGEKGEKGDPGIRGINGQKGESGIQGLVGPPGL 719



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 78/153 (50%), Gaps = 15/153 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P GL G  G+ G+ GAK         G++G PG    PG  G+P  +G+RGPKGD G P 
Sbjct: 477 PRGLPGIKGEPGKDGAK---------GDRGLPGF---PGLHGMPAPKGERGPKGDQGVP- 523

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
             GI G +   G  G  G PG  G  G  G PG PGL+G  G  G+ GIPG  G  G+ G
Sbjct: 524 --GIYGKKANPGRSGKDGLPGSPGFKGEVGQPGPPGLEGHRGEPGIPGIPGNQGAKGQKG 581

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G KG TG  G  G  G  G+PG P 
Sbjct: 582 EIGPPGQPGAKGSTGDTGLMGPEGSFGLPGAPG 614



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G PG +GK GP+G    PG +G PG +G +G +G  G+PG  G+    G  G  G  G+P
Sbjct: 467 GQPGPDGKPGPRG---LPGIKGEPGKDGAKGDRGLPGFPGLHGMPAPKGERGPKGDQGVP 523

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGTPAICAYK 268
           G  G    PG+ G   KDG+PG+ G  GE G  GP    G+RG+ GI G+PG       K
Sbjct: 524 GIYGKKANPGRSG---KDGLPGSPGFKGEVGQPGPPGLEGHRGEPGIPGIPGNQGAKGQK 580

Query: 269 RE 270
            E
Sbjct: 581 GE 582



 Score = 40.0 bits (92), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 24/38 (63%)

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+PG DG+PG  GIPG  G  G +G+ G  G +G  GI
Sbjct: 800 GLPGNDGVPGLTGIPGRPGARGTRGLPGKNGAKGNQGI 837


>gi|321474928|gb|EFX85892.1| hypothetical protein DAPPUDRAFT_313736 [Daphnia pulex]
          Length = 474

 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/165 (47%), Positives = 90/165 (54%), Gaps = 22/165 (13%)

Query: 113 GLQGPIGQKGEIGAKG---------EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           G  GP+G KGEIGA G           G  G  G+ GAPG  G PGPQG PG +G  GP 
Sbjct: 193 GAPGPVGPKGEIGAPGITIESKIPGPPGATGYPGKDGAPGAAGSPGPQGNPGTQGPVGPA 252

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP-------GLDGIPGRNGM 216
           G  GY G  GI       GPKG+ G PG  G  G+DGLPG P       G  G  G+ G 
Sbjct: 253 GKNGYAGSPGI------AGPKGEPGKPGYNGAPGKDGLPGAPSTQPGPVGPQGPVGKPGY 306

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           +G PGKDG  G  G PG +G NG  G TGP+G +GK G +G PG+
Sbjct: 307 NGAPGKDGAVGPVGAPGKDGLNGAPGATGPQGEQGKPGKDGYPGS 351



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 81/151 (53%), Gaps = 4/151 (2%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG  G  G +G  G +G +G  G+ G  G+PG+    GP+G PG  G  G  G  G PG 
Sbjct: 231 PGAAGSPGPQGNPGTQGPVGPAGKNGYAGSPGIA---GPKGEPGKPGYNGAPGKDGLPGA 287

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           P   PG  G +GP G  GY G  G DG  G  G PG DG+ G  G  G  G+ G PGKDG
Sbjct: 288 PSTQPGPVGPQGPVGKPGYNGAPGKDGAVGPVGAPGKDGLNGAPGATGPQGEQGKPGKDG 347

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG+ G  G  G  GP+G +G+ G  G PG+
Sbjct: 348 YPGSAGAPGTPGAQGPQGIQGEQGPAGTPGS 378



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 79/152 (51%), Gaps = 12/152 (7%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           GE GV GE G +G  G+ G PGPQG+ G++G  G  G  G  GP    G++G+ G  G  
Sbjct: 121 GEPGVNGEAGPQGVAGLDGAPGPQGLKGEQGADGAPGVAGLNGPV---GEKGEAGSNGAD 177

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------PGKDGLPGKDGIPGTNGTN 238
           G PG  G  G+DG  G PG  G  G  G  GI         PG  G PGKDG PG  G+ 
Sbjct: 178 GAPGAQGSPGKDGYNGAPGPVGPKGEIGAPGITIESKIPGPPGATGYPGKDGAPGAAGSP 237

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G +G  G +G  G +G NG  G+P I   K E
Sbjct: 238 GPQGNPGTQGPVGPAGKNGYAGSPGIAGPKGE 269



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 84/164 (51%), Gaps = 21/164 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI--P-GDEGKRGPKGDMGY 168
           PG+ G  G +G  G  G  G +G +GE+GA    G PG  G+  P G++G+ G  G  G 
Sbjct: 123 PGVNGEAGPQGVAGLDGAPGPQGLKGEQGA---DGAPGVAGLNGPVGEKGEAGSNGADGA 179

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDG---RDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           PG QG PG +G  G  G +G  G IG  G      +PG PG  G PG+   DG PG  G 
Sbjct: 180 PGAQGSPGKDGYNGAPGPVGPKGEIGAPGITIESKIPGPPGATGYPGK---DGAPGAAGS 236

Query: 226 PGKDGIPGT---------NGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G PGT         NG  G  G+ GP+G  GK G NG PG
Sbjct: 237 PGPQGNPGTQGPVGPAGKNGYAGSPGIAGPKGEPGKPGYNGAPG 280



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 72/152 (47%), Gaps = 24/152 (15%)

Query: 113 GLQGPIGQKG------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G QGP+G+ G      + GA G +G  G+ G  GAPG  GP G QG PG +G        
Sbjct: 296 GPQGPVGKPGYNGAPGKDGAVGPVGAPGKDGLNGAPGATGPQGEQGKPGKDG-------- 347

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            YPG  G PG  G +GP+         G+ G  G  G PG  G  G  G  G  G +G P
Sbjct: 348 -YPGSAGAPGTPGAQGPQ---------GIQGEQGPAGTPGSIGPQGEIGPVGPAGPEGKP 397

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G+ G PG  G  G  G  GP G  GK G +G 
Sbjct: 398 GQAGKPGYPGPVGPVGQVGPVGQEGKPGQDGA 429


>gi|335279173|ref|XP_003121321.2| PREDICTED: collagen alpha-1(IX) chain [Sus scrofa]
          Length = 922

 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 86/189 (45%), Positives = 105/189 (55%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VKGERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G               + G +GEKG
Sbjct: 425 LPGMRGHKGAKGEVGEPGRQGHKGEEGDQGEPGEVGAQGPPGAQGLRGITGIAGAKGEKG 484

Query: 141 APGVVGPPGPQGI---PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+   PGD+G+R      GPKGD G  G +GIPG     GPKGD G P 
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGAQGSRGIPGLP---GPKGDTGLP- 540

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G+DGR+G+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G
Sbjct: 541 --GVDGREGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGIPGAKGVAGEKGNTGAPGKPG 598

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 599 QLGNSGKPG 607



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 64/120 (53%), Gaps = 6/120 (5%)

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           PPG  G PG  G RG KG  G     G PG +G +G +GD G PG +G  G  G  G  G
Sbjct: 416 PPGRSGYPGLPGMRGHKGAKGE---VGEPGRQGHKGEEGDQGEPGEVGAQGPPGAQGLRG 472

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           + GI G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 473 ITGIAGAKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGAQGSRGIPGLPG 532



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 76/144 (52%), Gaps = 15/144 (10%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE+G KG+RG +G+ G+ G P            GPKGD G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEIGPKGDRGAQGSRGIPGLP------------GPKGDTG 538

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G +GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 539 LPGVDGREGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGIPGAKGVAGEKGNTGAPGKPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRG 248
             G  G PG  G  GE G  GPRG
Sbjct: 599 QLGNSGKPGQQGPPGEVGPRGPRG 622



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 74/140 (52%), Gaps = 6/140 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---PGPQGIPGDEGKR 181
           G  G  G+ G RG KGA G VG PG QG  G+EG +G  G++G    PG QG+ G  G  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEVGEPGRQGHKGEEGDQGEPGEVGAQGPPGAQGLRGITGIA 477

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G KG+ G  G  G  G  GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ 
Sbjct: 478 GAKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGAQGSRGIPGLPGPKGDT 537

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G+    G  G+ GI G+PGT
Sbjct: 538 GLP---GVDGREGIPGMPGT 554



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 65/130 (50%), Gaps = 6/130 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG-- 155
            + G      +  PPG  GP G +G  G++G  G+ G +G+ G PGV G  G  G+PG  
Sbjct: 496 GLPGAPGDQGQRGPPGEIGPKGDRGAQGSRGIPGLPGPKGDTGLPGVDGREGIPGMPGTK 555

Query: 156 ----DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                 G  G  G  G PG  GIPG +G  G KG+ G PG+ G  G  G PG+ G  G  
Sbjct: 556 GEPGKPGPPGEAGLQGLPGIPGIPGAKGVAGEKGNTGAPGKPGQLGNSGKPGQQGPPGEV 615

Query: 212 GRNGMDGIPG 221
           G  G  G+PG
Sbjct: 616 GPRGPRGLPG 625



 Score = 46.2 bits (108), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 49/91 (53%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGDMG  G +G PG    RGPKG         
Sbjct: 812 QMGLRGLPGMKGPPGALGL------RGPKGDMGERGDRGPPG----RGPKG--------- 852

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPG+PG     GRNG DG  G  G+
Sbjct: 853 LPGATGLPGDPGPASY-GRNGRDGERGPPGV 882



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G+ G RGP  +G  G PG  G+PGD G       
Sbjct: 812 QMGLRGLPGMKGPPGALGLRGPKGDMGERGDRGPPGRGPKGLPGATGLPGDPG------- 864

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 865 ---PASYGRNGRDGERGPPGV 882



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 41/81 (50%), Gaps = 18/81 (22%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG +G PG  G RGPKGDMG               E G  G PGR G  G+PG  GLP
Sbjct: 817 GLPGMKGPPGALGLRGPKGDMG---------------ERGDRGPPGR-GPKGLPGATGLP 860

Query: 227 GKDGIP--GTNGTNGEKGMTG 245
           G  G    G NG +GE+G  G
Sbjct: 861 GDPGPASYGRNGRDGERGPPG 881



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 77/177 (43%), Gaps = 60/177 (33%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGK--------- 159
           PG +G  G+KG  GA G   ++G  G+ G++G PG VGP GP+G+PG  G+         
Sbjct: 579 PGAKGVAGEKGNTGAPGKPGQLGNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPVGPPGP 638

Query: 160 ------------------------RGPKGDMGYPGPQGIPG---------------DEGK 180
                                   +G +G +G PGP+G  G               D G 
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGVSGEEGEAGERGELGDIGL 698

Query: 181 RGPKGDMGYPGRIGLDGRDGLPG---------EPGLDGIPGRNGMDGIPGKDGLPGK 228
            GPKG +G PG  GL G +G  G          PG  G+ G  G  G+PG +G PG+
Sbjct: 699 PGPKGSVGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGIEGPPGR 755


>gi|449279974|gb|EMC87396.1| Macrophage receptor MARCO [Columba livia]
          Length = 481

 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/169 (42%), Positives = 92/169 (54%), Gaps = 21/169 (12%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDMGY---PGP 171
           KG+ G +G  G+KG +G KG PG VGP G  G+ G++G+      +GPKG+MG    PGP
Sbjct: 170 KGDQGIQGLHGLKGAKGSKGDPGPVGPNGEPGVRGEKGEMGLTGLQGPKGEMGKKGDPGP 229

Query: 172 ---------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGI 219
                    QG+PG  G  G  G+ G+PG+ G  G  GLPG    PG +G PG+ G  G 
Sbjct: 230 HGPMGPQGQQGVPGLPGFNGSMGEPGHPGQKGEAGATGLPGLAGIPGQEGRPGQKGEKGD 289

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G PG  GI G  G  G+ G+TGP G +G  G  G+ G P +   K
Sbjct: 290 HGTSGSPGTPGIAGLKGEKGDSGVTGPPGQKGAKGDQGLAGIPGLTGQK 338



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 96/205 (46%), Gaps = 30/205 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPG 149
           +  + G   +      PG  GP G+ G  G KGEMG+      KGE G+KG PG  GP G
Sbjct: 175 IQGLHGLKGAKGSKGDPGPVGPNGEPGVRGEKGEMGLTGLQGPKGEMGKKGDPGPHGPMG 234

Query: 150 PQGI---------------PGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPG 191
           PQG                PG  G++G  G  G PG  GIPG EG+   +G KGD G  G
Sbjct: 235 PQGQQGVPGLPGFNGSMGEPGHPGQKGEAGATGLPGLAGIPGQEGRPGQKGEKGDHGTSG 294

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN-- 249
             G  G  GL GE G  G+ G  G  G  G  GL G  G+ G  G+ G+ G  GP+GN  
Sbjct: 295 SPGTPGIAGLKGEKGDSGVTGPPGQKGAKGDQGLAGIPGLTGQKGSKGDYGSPGPKGNPG 354

Query: 250 ----RGKSGINGVPGTPAICAYKRE 270
               +G  G +G PGT      K E
Sbjct: 355 VKGDKGDRGYSGSPGTKGSKGEKGE 379



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 84/170 (49%), Gaps = 6/170 (3%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGP 147
           + L  +QG      +   PG  GP+G +G+ G        G MG  G  G+KG  G  G 
Sbjct: 209 MGLTGLQGPKGEMGKKGDPGPHGPMGPQGQQGVPGLPGFNGSMGEPGHPGQKGEAGATGL 268

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  GIPG EG+ G KG+ G  G  G PG  G  G KG+ G  G  G  G+ G  G+ GL
Sbjct: 269 PGLAGIPGQEGRPGQKGEKGDHGTSGSPGTPGIAGLKGEKGDSGVTGPPGQKGAKGDQGL 328

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GIPG  G  G  G  G PG  G PG  G  G++G +G  G +G  G  G
Sbjct: 329 AGIPGLTGQKGSKGDYGSPGPKGNPGVKGDKGDRGYSGSPGTKGSKGEKG 378



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/147 (43%), Positives = 80/147 (54%), Gaps = 12/147 (8%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KG+ G++G  G KGA G  G PGP G  G+ G RG KG+MG  G QG         PKG+
Sbjct: 170 KGDQGIQGLHGLKGAKGSKGDPGPVGPNGEPGVRGEKGEMGLTGLQG---------PKGE 220

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           MG  G  G  G  G  G+ G+ G+PG NG     G PG+ G  G  G+PG  G  G++G 
Sbjct: 221 MGKKGDPGPHGPMGPQGQQGVPGLPGFNGSMGEPGHPGQKGEAGATGLPGLAGIPGQEGR 280

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRE 270
            G +G +G  G +G PGTP I   K E
Sbjct: 281 PGQKGEKGDHGTSGSPGTPGIAGLKGE 307



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 50/123 (40%), Gaps = 30/123 (24%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G QGI G  G +G KG  G PGP G  G+ G RG KG+MG  G  G  G  G  G+PG  
Sbjct: 171 GDQGIQGLHGLKGAKGSKGDPGPVGPNGEPGVRGEKGEMGLTGLQGPKGEMGKKGDPGPH 230

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G  G+PG   LPG                            NG  G P     K
Sbjct: 231 GPMGPQGQQGVPG---LPG---------------------------FNGSMGEPGHPGQK 260

Query: 269 RES 271
            E+
Sbjct: 261 GEA 263


>gi|432885733|ref|XP_004074736.1| PREDICTED: collagen alpha-1(XXVII) chain A-like [Oryzias latipes]
          Length = 1797

 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/142 (46%), Positives = 88/142 (61%), Gaps = 6/142 (4%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGDMGYPGPQ 172
            G+ G+ G KG++GV GERG  GAPG  G  GPQG        GD+G++G KG +G  G +
Sbjct: 1300 GESGDPGYKGQIGVDGERGRPGAPGAPGHSGPQGQKGPKGAKGDQGQKGKKGQLGQKGAR 1359

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            GI G  G  GP+G +G  G+ G+ G DGLPG+ G +G+PG +G DG PG  G  G+ G P
Sbjct: 1360 GIEGQGGLAGPRGVVGPEGQEGVPGPDGLPGKDGSEGMPGEHGDDGEPGLPGKAGERGKP 1419

Query: 233  GTNGTNGEKGMTGPRGNRGKSG 254
            G  G  G++G  GP+G +G  G
Sbjct: 1420 GVPGLPGDQGGIGPKGEQGLQG 1441



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 99/218 (45%), Gaps = 70/218 (32%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP+G+ G  G  G  G +G  G  GAPG +G  G  G+PG +G +GP G MG PGP+
Sbjct: 1209 GETGPVGKMGLPGTVGPKGSRGTIGHAGAPGRMGQQGEPGLPGYQGHQGPLGPMGRPGPK 1268

Query: 173  GIPGDEG----------------------KRGPKGDMGYPGRIGLDG---RDGLPGEPGL 207
            G  G++G                      +RG  GD GY G+IG+DG   R G PG PG 
Sbjct: 1269 GEKGEQGDDGKQEGPPGPPGDTGPPGDRGERGESGDPGYKGQIGVDGERGRPGAPGAPGH 1328

Query: 208  D------------------------------------------GIPGRNGMDGIPGKDGL 225
                                                       G+ G  G +G+PG DGL
Sbjct: 1329 SGPQGQKGPKGAKGDQGQKGKKGQLGQKGARGIEGQGGLAGPRGVVGPEGQEGVPGPDGL 1388

Query: 226  PGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGKD   G+PG +G +GE G+ G  G RGK G+ G+PG
Sbjct: 1389 PGKDGSEGMPGEHGDDGEPGLPGKAGERGKPGVPGLPG 1426



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 90/158 (56%), Gaps = 3/158 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP GQKG  GAKG+ G KG++G+ G  G  G  G  G+ G  G  GP+G  G PGP
Sbjct: 1326 PGHSGPQGQKGPKGAKGDQGQKGKKGQLGQKGARGIEGQGGLAGPRGVVGPEGQEGVPGP 1385

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+PG +G  G  G+ G  G  GL G+ G  G+PG+ G+PG  G  G  G+ GL G+ G 
Sbjct: 1386 DGLPGKDGSEGMPGEHGDDGEPGLPGKAGERGKPGVPGLPGDQGGIGPKGEQGLQGQSGP 1445

Query: 232  PGTNGTNGEKGMTGPRGNR---GKSGINGVPGTPAICA 266
            PG  G  G  G+ GP+G+R   G+ G  G PG P I  
Sbjct: 1446 PGKKGFKGGTGIQGPKGDRGPKGQPGDTGAPGFPGILG 1483



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 84/161 (52%), Gaps = 15/161 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GP+G +G  G +G +G+ G         E+G  G PG  G  G  G PG+ G+RGP 
Sbjct: 684 GLPGPVGPRGPKGVRGFIGIPGLFGLPGPDGEKGIPGEPGKRGKMGRPGFPGESGERGPP 743

Query: 164 G------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G      DMG  GP G+PG  G  GP G+MG PG  GL G  G  GEPGL G  G  G+ 
Sbjct: 744 GADGEPGDMGPLGPNGVPGLIGDMGPVGEMGLPGPAGLKGVPGNAGEPGLKGDKGEIGIP 803

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G+ G  G  GI G  G  G +G  GP+G  G  G +G 
Sbjct: 804 GEQGEIGFKGDKGIQGPPGLIGVRGKPGPQGKEGDKGPDGT 844



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 89/160 (55%), Gaps = 6/160 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G +G+KG IG  G +G +G  G++G PG+ G PGP    G +G +G KGDMG  G 
Sbjct: 1100 PGLPGELGEKGPIGPAGNIGEQGLIGQRGEPGLEGDPGPA---GPDGAKGEKGDMGQEGN 1156

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGK 228
            +G  G+ G +G +G  G PG  G+ G +G P   GE G  G+ G  G  G  G+ G  GK
Sbjct: 1157 KGAKGETGLKGKEGPSGSPGLTGVRGPEGKPGKIGERGKLGLKGAKGHIGHLGETGPVGK 1216

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G+PGT G  G +G  G  G  G+ G  G PG P    ++
Sbjct: 1217 MGLPGTVGPKGSRGTIGHAGAPGRMGQQGEPGLPGYQGHQ 1256



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 92/179 (51%), Gaps = 27/179 (15%)

Query: 113 GLQGPIGQKG---EIGAKGEMG---VKGERGEKGAPGV------VGPPGPQGIPGDEGKR 160
           GL GP G+KG   E G +G+MG     GE GE+G PG       +GP GP G+PG  G  
Sbjct: 708 GLPGPDGEKGIPGEPGKRGKMGRPGFPGESGERGPPGADGEPGDMGPLGPNGVPGLIGDM 767

Query: 161 GPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GP G+MG PGP   +G+PG+ G+ G KGD G  G  G  G  G  G+ G+ G PG  G+ 
Sbjct: 768 GPVGEMGLPGPAGLKGVPGNAGEPGLKGDKGEIGIPGEQGEIGFKGDKGIQGPPGLIGVR 827

Query: 218 GIPGKDGLPGKDGIPGTN------------GTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG  G  G  G  GT             G  GE G+ GP+G  G  G+ G  G P +
Sbjct: 828 GKPGPQGKEGDKGPDGTQGPPGPEGFPGDMGPPGENGLEGPKGKPGDRGLPGPRGIPGL 886



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 93/178 (52%), Gaps = 21/178 (11%)

Query: 112 PGLQGPIGQKGEIGAKGE---------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           PG+ GP+G+ G+IG  G+          G  GE+G  G+PG  G PG QG+PG  G RGP
Sbjct: 635 PGIIGPVGKPGQIGRIGQKGHPGPPGLPGEPGEQGPVGSPGAKGYPGRQGLPGPVGPRGP 694

Query: 163 KGDMGY---------PGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           KG  G+         PGP   +GIPG+ GKRG  G  G+PG  G  G  G  GEPG  G 
Sbjct: 695 KGVRGFIGIPGLFGLPGPDGEKGIPGEPGKRGKMGRPGFPGESGERGPPGADGEPGDMGP 754

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G NG+ G+ G  G  G+ G+PG  G  G  G  G  G +G  G  G+PG      +K
Sbjct: 755 LGPNGVPGLIGDMGPVGEMGLPGPAGLKGVPGNAGEPGLKGDKGEIGIPGEQGEIGFK 812



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 94/186 (50%), Gaps = 21/186 (11%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L   +G    T E    G +GP G  G+IG   ++G++G  GE G KG PGV GP GP  
Sbjct: 1006 LRGARGPDGPTGEMGLEGKKGPDGPPGKIGFPGSQGKIGEPGETGPKGFPGVQGPSGP-- 1063

Query: 153  IPGDEGKRGPK---------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
             PGD+G  G +               G MG PG  G PG  G+ G KG +G  G IG  G
Sbjct: 1064 -PGDKGIAGEQGPPGPPGTVGPLGEIGQMGPPGKLGEPGLPGELGEKGPIGPAGNIGEQG 1122

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G  GEPGL+G PG  G DG  G+ G  G++G  G  G  G KG  GP G+ G +G+ G
Sbjct: 1123 LIGQRGEPGLEGDPGPAGPDGAKGEKGDMGQEGNKGAKGETGLKGKEGPSGSPGLTGVRG 1182

Query: 258  VPGTPA 263
              G P 
Sbjct: 1183 PEGKPG 1188



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 91/193 (47%), Gaps = 36/193 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G +G  GE+G  G  G+KG  G  G PG+ G  G  GIPG++G+ G KGD G  GP
Sbjct: 761 PGLIGDMGPVGEMGLPGPAGLKGVPGNAGEPGLKGDKGEIGIPGEQGEIGFKGDKGIQGP 820

Query: 172 QGIPGDEGKRGPKG---------------------DMGYPGRIGLDGRDGLPGE---PGL 207
            G+ G  GK GP+G                     DMG PG  GL+G  G PG+   PG 
Sbjct: 821 PGLIGVRGKPGPQGKEGDKGPDGTQGPPGPEGFPGDMGPPGENGLEGPKGKPGDRGLPGP 880

Query: 208 DGIPGRNG------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            GIPG  G            ++G  G++G PGK G  G  G  G  G  GP G RG  G 
Sbjct: 881 RGIPGLEGDEGPIGPAGPPGLEGRMGREGFPGKVGPEGVKGEPGVTGKPGPMGERGLVGF 940

Query: 256 NGVPGTPAICAYK 268
            G  G   +   K
Sbjct: 941 IGPVGEAGLAGEK 953



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 95/191 (49%), Gaps = 45/191 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGD------------ 156
           PGL+G  G+ G  G +GE+G KG++G +G PG++G    PGPQG  GD            
Sbjct: 791 PGLKGDKGEIGIPGEQGEIGFKGDKGIQGPPGLIGVRGKPGPQGKEGDKGPDGTQGPPGP 850

Query: 157 ---------------EGKRGPKGDMGYPGPQGIPGDEGK------------RGPKGDMGY 189
                          EG +G  GD G PGP+GIPG EG              G  G  G+
Sbjct: 851 EGFPGDMGPPGENGLEGPKGKPGDRGLPGPRGIPGLEGDEGPIGPAGPPGLEGRMGREGF 910

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG++   G +G+ GEPG+ G PG  G  G+ G  G  G+ G+ G  G  G+ G+ GP G 
Sbjct: 911 PGKV---GPEGVKGEPGVTGKPGPMGERGLVGFIGPVGEAGLAGEKGDRGQMGVPGPPGE 967

Query: 250 RGKSGINGVPG 260
           +G  G  G+PG
Sbjct: 968 KGSMGHPGIPG 978



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 87/177 (49%), Gaps = 21/177 (11%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            IGQ G  G  GE G+ GE GEKG  G  G  G QG+ G  G+ G +GD G  GP G  G+
Sbjct: 1088 IGQMGPPGKLGEPGLPGELGEKGPIGPAGNIGEQGLIGQRGEPGLEGDPGPAGPDGAKGE 1147

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            +G  G +G+ G  G  GL G++G  G PGL G+    G +G PGK G  GK G+ G  G 
Sbjct: 1148 KGDMGQEGNKGAKGETGLKGKEGPSGSPGLTGV---RGPEGKPGKIGERGKLGLKGAKGH 1204

Query: 238  NGEKGMT------------GPRGNRGKSGINGVP------GTPAICAYKRESCSLLP 276
             G  G T            GP+G+RG  G  G P      G P +  Y+     L P
Sbjct: 1205 IGHLGETGPVGKMGLPGTVGPKGSRGTIGHAGAPGRMGQQGEPGLPGYQGHQGPLGP 1261



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/140 (44%), Positives = 77/140 (55%), Gaps = 6/140 (4%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +G +GQ+G  GAKGE G+KG+ G  G+PG+ G  GP+G PG  G+RG    +G  G +
Sbjct: 1146 GEKGDMGQEGNKGAKGETGLKGKEGPSGSPGLTGVRGPEGKPGKIGERG---KLGLKGAK 1202

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  G  G+ GP G MG PG +G  G  G  G     G PGR G  G PG  G  G  G  
Sbjct: 1203 GHIGHLGETGPVGKMGLPGTVGPKGSRGTIGH---AGAPGRMGQQGEPGLPGYQGHQGPL 1259

Query: 233  GTNGTNGEKGMTGPRGNRGK 252
            G  G  G KG  G +G+ GK
Sbjct: 1260 GPMGRPGPKGEKGEQGDDGK 1279



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 94/206 (45%), Gaps = 54/206 (26%)

Query: 113  GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGK---- 159
            G  GP+G++G    IG  GE G+ GE+G++G  GV GPPG +G      IPG+ G     
Sbjct: 927  GKPGPMGERGLVGFIGPVGEAGLAGEKGDRGQMGVPGPPGEKGSMGHPGIPGETGPSGPP 986

Query: 160  --------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLP 202
                          RGPKG  G  GP G  G+ G  G KG  G PG+IG     G+ G P
Sbjct: 987  GRPGPPGASGPAGTRGPKGLRGARGPDGPTGEMGLEGKKGPDGPPGKIGFPGSQGKIGEP 1046

Query: 203  GEPGLDGIPGRNGMDGIPGKDGL------------------------PGKDGIPGTNGTN 238
            GE G  G PG  G  G PG  G+                        PGK G PG  G  
Sbjct: 1047 GETGPKGFPGVQGPSGPPGDKGIAGEQGPPGPPGTVGPLGEIGQMGPPGKLGEPGLPGEL 1106

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAI 264
            GEKG  GP GN G+ G+ G  G P +
Sbjct: 1107 GEKGPIGPAGNIGEQGLIGQRGEPGL 1132



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 84/169 (49%), Gaps = 21/169 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGDM 166
            G QG  G+KG++G KG  G++G+ G  G  GVVGP      PGP G+PG +G  G  G+ 
Sbjct: 1342 GDQGQKGKKGQLGQKGARGIEGQGGLAGPRGVVGPEGQEGVPGPDGLPGKDGSEGMPGEH 1401

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGE------------PGLDGIP 211
            G  G  G+PG  G+RG  G  G P   G IG  G  GL G+             G+ G  
Sbjct: 1402 GDDGEPGLPGKAGERGKPGVPGLPGDQGGIGPKGEQGLQGQSGPPGKKGFKGGTGIQGPK 1461

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G PG  G PG  GI G  G  G  G  GP+G RG  G  G PG
Sbjct: 1462 GDRGPKGQPGDTGAPGFPGILGVFGPKGPPGDFGPKGIRGPKGPLGAPG 1510



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 86/167 (51%), Gaps = 12/167 (7%)

Query: 97   VAMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            +  QG      E   PGL+G   P G  G  G KG+MG +G +G KG  G+ G  GP G 
Sbjct: 1118 IGEQGLIGQRGE---PGLEGDPGPAGPDGAKGEKGDMGQEGNKGAKGETGLKGKEGPSGS 1174

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            PG  G RGP+G    PG  G  G  G +G KG +G+ G  G  G+ GLPG  G  G  G 
Sbjct: 1175 PGLTGVRGPEGK---PGKIGERGKLGLKGAKGHIGHLGETGPVGKMGLPGTVGPKGSRGT 1231

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGING 257
             G  G PG+ G  G+ G+PG  G     G  G  GP+G +G+ G +G
Sbjct: 1232 IGHAGAPGRMGQQGEPGLPGYQGHQGPLGPMGRPGPKGEKGEQGDDG 1278



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 76/149 (51%), Gaps = 24/149 (16%)

Query: 136 RGEKGAPGVVGPPGPQGIPG------------------DEGKRGPKGDMGYPGPQGIPGD 177
           +GEKG PG++GP G  G  G                  ++G  G  G  GYPG QG+PG 
Sbjct: 629 KGEKGDPGIIGPVGKPGQIGRIGQKGHPGPPGLPGEPGEQGPVGSPGAKGYPGRQGLPGP 688

Query: 178 EGKRGPKGDMGY---PGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G RGPKG  G+   PG  GL   DG  G+PGEPG  G  GR G  G  G+ G PG DG 
Sbjct: 689 VGPRGPKGVRGFIGIPGLFGLPGPDGEKGIPGEPGKRGKMGRPGFPGESGERGPPGADGE 748

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G  G  G+ G  G+ G  G  G+PG
Sbjct: 749 PGDMGPLGPNGVPGLIGDMGPVGEMGLPG 777



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 84/178 (47%), Gaps = 36/178 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP G KGE G  G+ G  GERG  G    +GP G  G+ G++G RG    MG PGP
Sbjct: 911  PGKVGPEGVKGEPGVTGKPGPMGERGLVG---FIGPVGEAGLAGEKGDRG---QMGVPGP 964

Query: 172  QGIPGDEGKRGPKGDMGYPGRIG---------------------LDGRDGLPGEPGLDGI 210
               PG+      KG MG+PG  G                       G  GL G  G DG 
Sbjct: 965  ---PGE------KGSMGHPGIPGETGPSGPPGRPGPPGASGPAGTRGPKGLRGARGPDGP 1015

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G++G  G DG PGK G PG+ G  GE G TGP+G  G  G +G PG   I   +
Sbjct: 1016 TGEMGLEGKKGPDGPPGKIGFPGSQGKIGEPGETGPKGFPGVQGPSGPPGDKGIAGEQ 1073



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 87/183 (47%), Gaps = 31/183 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++GP G+ G+IG +G++G+KG +G  G  G  GP G  G+PG  G +G +G +G+ G  
Sbjct: 1179 GVRGPEGKPGKIGERGKLGLKGAKGHIGHLGETGPVGKMGLPGTVGPKGSRGTIGHAGAP 1238

Query: 173  G---------IPGDEGKRGPKGDMGYPGRIGLDGRDG----------------------L 201
            G         +PG +G +GP G MG PG  G  G  G                       
Sbjct: 1239 GRMGQQGEPGLPGYQGHQGPLGPMGRPGPKGEKGEQGDDGKQEGPPGPPGDTGPPGDRGE 1298

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             GE G  G  G+ G+DG  G+ G PG  G  G  G  G KG  G +G +GK G  G  G 
Sbjct: 1299 RGESGDPGYKGQIGVDGERGRPGAPGAPGHSGPQGQKGPKGAKGDQGQKGKKGQLGQKGA 1358

Query: 262  PAI 264
              I
Sbjct: 1359 RGI 1361



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 79/164 (48%), Gaps = 33/164 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G  GE G  GE G+ G+ GE+G PGV       G+PGD+G  GPKG+ G  G 
Sbjct: 1389 PGKDGSEGMPGEHGDDGEPGLPGKAGERGKPGV------PGLPGDQGGIGPKGEQGLQGQ 1442

Query: 172  ---------------QGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLPGEPGLDGIPGR 213
                           QG  GD G +G  GD    G+PG +G+ G  G PG+ G  GI G 
Sbjct: 1443 SGPPGKKGFKGGTGIQGPKGDRGPKGQPGDTGAPGFPGILGVFGPKGPPGDFGPKGIRGP 1502

Query: 214  NGMDGIPGKDGLP---------GKDGIPGTNGTNGEKGMTGPRG 248
             G  G PG+ G+          G  G  G  G++GE G  GPRG
Sbjct: 1503 KGPLGAPGRVGVVGPVGIIGPSGSTGPRGQKGSSGEIGFQGPRG 1546



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 62/146 (42%), Gaps = 48/146 (32%)

Query: 163 KGDMGY---PGPQGIPGDEGKRGP---------------------------KGDMGYPGR 192
           KGD G    P P+G  GD G  GP                           +G +G PG 
Sbjct: 617 KGDPGLSPGPAPKGEKGDPGIIGPVGKPGQIGRIGQKGHPGPPGLPGEPGEQGPVGSPGA 676

Query: 193 IGLDGRDGLPGE---------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            G  GR GLPG                PGL G+PG +G  GIPG+ G  GK G PG  G 
Sbjct: 677 KGYPGRQGLPGPVGPRGPKGVRGFIGIPGLFGLPGPDGEKGIPGEPGKRGKMGRPGFPGE 736

Query: 238 NGEK---GMTGPRGNRGKSGINGVPG 260
           +GE+   G  G  G+ G  G NGVPG
Sbjct: 737 SGERGPPGADGEPGDMGPLGPNGVPG 762



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 48/96 (50%), Gaps = 15/96 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G +GP GQ G+ GA G  G+ G  G KG PG  GP         +G RGPKG +G PG
Sbjct: 1460 PKGDRGPKGQPGDTGAPGFPGILGVFGPKGPPGDFGP---------KGIRGPKGPLGAPG 1510

Query: 171  ------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                  P GI G  G  GP+G  G  G IG  G  G
Sbjct: 1511 RVGVVGPVGIIGPSGSTGPRGQKGSSGEIGFQGPRG 1546


>gi|345778517|ref|XP_538994.3| PREDICTED: collagen alpha-1(IX) chain isoform 1 [Canis lupus
           familiaris]
          Length = 921

 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 85/186 (45%), Positives = 105/186 (56%), Gaps = 24/186 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G +GE+G +G                +GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEQGEVGAQGPPGAQGLRGITGIVGAKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIG 194
           A G+ G PGPQGIPG   D+G+RGP G++G  G   PQG  G  G  G KGD G P   G
Sbjct: 485 ARGIDGEPGPQGIPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGLPGTKGDTGLP---G 541

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           +DGR+G+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G+ G
Sbjct: 542 VDGREGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLG 601

Query: 255 INGVPG 260
            +G PG
Sbjct: 602 NSGKPG 607



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 78/143 (54%), Gaps = 12/143 (8%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G +G++G    QG PG +G RG  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEQGEVGA---QGPPGAQGLRGIT 474

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTN 238
           G +G  G  G  G DG PG  G+ G PG  G  G PG+       G  G  GIPG  GT 
Sbjct: 475 GIVGAKGEKGARGIDGEPGPQGIPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGLPGTK 534

Query: 239 GEKGMTGPRGNRGKSGINGVPGT 261
           G+ G+    G  G+ GI G+PGT
Sbjct: 535 GDTGLP---GVDGREGIPGMPGT 554



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGEQGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  GIPG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 478 GAKGEKGARGIDGEPGPQGIPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGLPG 532



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/147 (43%), Positives = 77/147 (52%), Gaps = 9/147 (6%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G+ G  G +G+ G  GE+G KG+RG +G+         +GIPG  G +G  G  G
Sbjct: 491 EPGPQGIPGAPGDQGQRGPPGEIGPKGDRGPQGS---------RGIPGLPGTKGDTGLPG 541

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G +GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G  G
Sbjct: 542 VDGREGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLG 601

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G PG  G  GE G  GPRG  G  G
Sbjct: 602 NSGKPGQQGPPGEVGPRGPRGLPGSRG 628



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 68/133 (51%), Gaps = 6/133 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G +G  G++G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 496 GIPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGLPGTKGDTGLPGVDGREGIPGMPGTK 555

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG+ G PG+ G  G  G PG+ G  G  
Sbjct: 556 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGNSGKPGQQGPPGEV 615

Query: 212 GRNGMDGIPGKDG 224
           G  G  G+PG  G
Sbjct: 616 GPRGPRGLPGSRG 628



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 49/91 (53%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGD+G  G +G PG    RGPKG         
Sbjct: 812 QMGLRGLPGIKGPPGALGL------RGPKGDLGERGERGPPG----RGPKG--------- 852

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPGEPG     GRNG DG  G  G+
Sbjct: 853 LPGATGLPGEPGPASY-GRNGRDGERGPPGV 882



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G+ G+RGP  +G  G PG  G+PG+ G       
Sbjct: 812 QMGLRGLPGIKGPPGALGLRGPKGDLGERGERGPPGRGPKGLPGATGLPGEPG------- 864

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 865 ---PASYGRNGRDGERGPPGV 882



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GP+
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGNTGAPGK---PGQLGNSGKPGQQGPPGEVGPRGPR 621

Query: 173 GIPGDEGK 180
           G+PG  G+
Sbjct: 622 GLPGSRGE 629



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 42/81 (51%), Gaps = 18/81 (22%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG +G PG  G RGPKGD+G               E G  G PGR G  G+PG  GLP
Sbjct: 817 GLPGIKGPPGALGLRGPKGDLG---------------ERGERGPPGR-GPKGLPGATGLP 860

Query: 227 GKDGIP--GTNGTNGEKGMTG 245
           G+ G    G NG +GE+G  G
Sbjct: 861 GEPGPASYGRNGRDGERGPPG 881


>gi|62088952|dbj|BAD92923.1| collagen, type XXIV, alpha 1 variant [Homo sapiens]
          Length = 867

 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 95/167 (56%), Gaps = 6/167 (3%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG   P G  GIPG 
Sbjct: 404 VGVPGLRGATGQQGPPGEPG---DQGEQGLKGERGSEGNKGKKGAPG---PSGKPGIPGL 457

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G  GPKG  GY G  GI G+ GK GP G  G PG  G  GR GL G PG  G+ G +G+
Sbjct: 458 QGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGL 517

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G PG  G  G+ G+PG  G  G++G  G +G++G  G  G+ G P 
Sbjct: 518 PGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPG 564



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/169 (44%), Positives = 99/169 (58%), Gaps = 15/169 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGP---QGIPGDEGKRGPK 163
           G+QG  G+KG+ G +G  G+       GERG +G PG+ G PG    +G+PG+ G RG +
Sbjct: 113 GIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQ 172

Query: 164 GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GD+G PG  G+   PG EG+ G +G+ G  G +G  G  G  GEPGL G PG  G +G+ 
Sbjct: 173 GDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQ 232

Query: 221 GKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           GKDGL   PG  G+PG +G  GE G+ G  G  G+SG  G+PG   I  
Sbjct: 233 GKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVG 281



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 92/182 (50%), Gaps = 12/182 (6%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            +QG   ST +   PG  G  G +G++G  GEMG++G  G +G  G+ G PG +G  G  
Sbjct: 149 GLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTA 208

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------- 210
           G  G  G+ G  G  G PG+EG +G  G  G PG  GL G DG  GE GL GI       
Sbjct: 209 GSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRS 268

Query: 211 -----PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                PG  G+ GIPG+ G PGK G  G  G  GE G  GP G  GKSG  G  GT    
Sbjct: 269 GQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAV 328

Query: 266 AY 267
            +
Sbjct: 329 GH 330



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 96/193 (49%), Gaps = 33/193 (17%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER---------GEKGA-------- 141
           + G    +++Y   G  GP+G  GE+G  G +G KGER         GEKG         
Sbjct: 12  LTGRSRRSRKYWKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPG 71

Query: 142 ----------PGVV---GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
                     PG V   GPPG QG  G  G RGP G +G  G QG  G++G +G +G  G
Sbjct: 72  VPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHG 131

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+ G  G  G  G+PGL G+PG  G  G+PG+ GL    G+ G  G  GE GM GP G
Sbjct: 132 LIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGL---RGLQGDVGPPGEMGMEGPPG 188

Query: 249 NRGKSGINGVPGT 261
             G+SG+ G PG 
Sbjct: 189 TEGESGLQGEPGA 201



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 84/152 (55%), Gaps = 12/152 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G++GE GA+G  G  G  G +GA G  GPPG    PGD+G++G KG+ G          E
Sbjct: 390 GERGEPGAEGYKGHVGVPGLRGATGQQGPPG---EPGDQGEQGLKGERG---------SE 437

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G +G KG  G  G+ G+ G  GL G  G+ G  G +G+ G PGK G PGK G+PG  G  
Sbjct: 438 GNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGP 497

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G+ G  G  G  G +G+PG+P I   K E
Sbjct: 498 GRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGE 529



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 96/207 (46%), Gaps = 46/207 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGI---PGDEGKR 160
           GLQG  G KG  G +G  G  GE+GE G PG++GP         PGP+GI   PG  G+ 
Sbjct: 230 GLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRP 289

Query: 161 GPKGDMGYPGP------QGIPGDEGKRGPK------GDMGYPGRIGLDGRDGLPGEPGLD 208
           G KGD G  GP      +G PG  GK GPK      G +G+ G +G DG  G+PG  G  
Sbjct: 290 GKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQ 349

Query: 209 GIPGRNGMDGIPGKDGLPGKD----------------------GIPGTNGTNGEKGMTGP 246
           G PG +G+ G  G+ G PG+D                      G PG  G  G  G+ G 
Sbjct: 350 GQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGL 409

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCS 273
           RG  G+ G  G PG       K E  S
Sbjct: 410 RGATGQQGPPGEPGDQGEQGLKGERGS 436



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 103/210 (49%), Gaps = 33/210 (15%)

Query: 96  LVAMQGFCNSTKEYC---PPGLQGPIGQKGEIGAKGEMGVKGE---------RGEKGAPG 143
           L  +QG      E     PPG +G  G +GE GAKG++G  G          RGE GAPG
Sbjct: 168 LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPG 227

Query: 144 ---------VVGPPGPQGIPGDEGKRGPKGDMGYP---------GPQGIPGDEGKRGPKG 185
                    + G PG +G+PG++G+   KG+MG P         G  G+PG EG  G  G
Sbjct: 228 EEGLQGKDGLKGVPGGRGLPGEDGE---KGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPG 284

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G PG+ G  G+ G  GE G  G PG+ G  G  G  G  G  G  G  G +GE G+ G
Sbjct: 285 QRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPG 344

Query: 246 PRGNRGKSGINGVPGTPAICAYKRESCSLL 275
            RG++G+ G +G+PG      Y  E  ++L
Sbjct: 345 YRGHQGQPGPSGLPGPKGEKGYPGEDSTVL 374



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 93/194 (47%), Gaps = 24/194 (12%)

Query: 112 PGLQGPIGQKG---------------EIGAKGEMGVKGERGEKGAPGVVGPPGP------ 150
           PGLQG +G KG               +IG  G+ G+ G RG  G  G+ G PGP      
Sbjct: 455 PGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGS 514

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+PG  G +GPKG+ G PG  GI G  G RG +GD G  G  GL G+   PGE G+ G+
Sbjct: 515 SGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQ---PGEYGVQGL 571

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G  G  G  G +G  G  GI G  G  G +G TGP G  G  G  G  G      ++ E
Sbjct: 572 TGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGEKGFRGE 631

Query: 271 SCSLLPNSETSQLL 284
           +  +  N+    L+
Sbjct: 632 TKQMDINAAIQALI 645



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 90/198 (45%), Gaps = 25/198 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQG 152
           ++   G    T    P G+ G  GQ+G  G    KG++G  GE G +G PG +G  GP+G
Sbjct: 261 IIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKG 320

Query: 153 IPGDEGK------RGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGR----------- 192
             G  G        GP G+ G P   G QG PG  G  GPKG+ GYPG            
Sbjct: 321 ARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPR 380

Query: 193 --IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
              G  G  G  GEPG +G  G  G+ G+ G  G  G  G PG  G  G KG  G  GN+
Sbjct: 381 GEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNK 440

Query: 251 GKSGINGVPGTPAICAYK 268
           GK G  G  G P I   +
Sbjct: 441 GKKGAPGPSGKPGIPGLQ 458


>gi|38454234|ref|NP_942042.1| collagen alpha-1(XXVII) chain precursor [Rattus norvegicus]
 gi|81912968|sp|Q80ZF0.1|CORA1_RAT RecName: Full=Collagen alpha-1(XXVII) chain; Flags: Precursor
 gi|28629490|gb|AAO43184.1| collagen type XXVII proalpha 1 chain [Rattus norvegicus]
          Length = 1855

 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 100/186 (53%), Gaps = 22/186 (11%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +GP+G +G+   +GE G  G  G++G  G+ G PG QG PG  G RG       PG
Sbjct: 1338 PPGERGPVGDRGD---RGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRG------RPG 1388

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            P+G  G+EG +G  G  G  GR G  G  GLPG     G+ GR G +G+ G+DG PG+DG
Sbjct: 1389 PKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGP---RGVVGRQGPEGMAGQDGNPGRDG 1445

Query: 231  IP---GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPP 287
             P   G  G +G+ G  GP G RG  G+ G+PG      +K ES   LP       L PP
Sbjct: 1446 RPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPP 1498

Query: 288  TIVGSE 293
               G+E
Sbjct: 1499 GKRGTE 1504



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 90/170 (52%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  GA G  G +G+ G +G+PG  G PG QG PG  G  GPKG  GY   
Sbjct: 696 PGPMGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGL 755

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGK 222
           PG  G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG  G+ G PG 
Sbjct: 756 PGLFGLPGSDGER---GLPGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 812

Query: 223 DGL------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL            PG  G+ G  G  GE G+ G +G +G  G++G PG
Sbjct: 813 LGLLGDMGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPG 862



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 86/169 (50%), Gaps = 18/169 (10%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  GA GE G+ G+ G KG  G +GPPG QG+ G  G+ G +GD+G  GP G+ GD
Sbjct: 1140 MGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGPVGPDGLKGD 1199

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
             G  GP G+ G  G+ GL G +GLPG PG+ G+ GR G  G  G+ G  G  G  G  G 
Sbjct: 1200 RGDPGPDGEHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKGYQGQ 1259

Query: 238  NGE------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             GE                  +G  GP G  G+ G  G PG      +K
Sbjct: 1260 LGEMGIPGDPGPPGTPGPKGSRGTLGPMGAPGRMGAQGEPGLAGYNGHK 1308



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 83/158 (52%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KGE G KG+ G  G  G +G  G+ G PGP+G+ G +G  G  G  G PG
Sbjct: 1383 PRGRPGPKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGPRGVVGRQGPEGMAGQDGNPG 1442

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              G PG +G++G  GD G  G  G  G  G+ G PG  G PG  G  G+PG+ G PGK G
Sbjct: 1443 RDGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRG 1502

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G  G  G +G  G +G  G SG  G PG   +   K
Sbjct: 1503 TEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPK 1540



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 94/198 (47%), Gaps = 36/198 (18%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G         P G  GP G KG +G  GE G+KG++GE+G PGV       G PG +G +
Sbjct: 814  GLLGDMGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGV------SGDPGFQGDK 867

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEP 205
            G  G  G+PG +G PG  GK G KG               D+G PG  G +G  G PG  
Sbjct: 868  GSHGLPGFPGARGKPGPMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGMKGKPGAR 927

Query: 206  GLDGIPGRNG---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            GL G PG+ G               ++G PG+ G PG+ G+ G+ G  G+ G  GP G +
Sbjct: 928  GLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQ 987

Query: 251  GKSGINGVPGTPAICAYK 268
            G  G  G+ G P I   K
Sbjct: 988  GLMGFVGLVGEPGIVGEK 1005



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/133 (50%), Positives = 73/133 (54%), Gaps = 12/133 (9%)

Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GAKG MG+ G          +G KG PG  G PG QG PG EG  G K   GYPG QG P
Sbjct: 682 GAKGNMGLPGLAGNPGPMGRKGHKGHPGAAGHPGEQGQPGPEGSPGAK---GYPGRQGFP 738

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G  GPKG  GY G  GL G  G  GE GL GIPG+ G  G PG  G  G+ G PG +
Sbjct: 739 GPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEMGRPGFPGDFGERGPPGLD 798

Query: 236 GTNGEKGMTGPRG 248
           G  GE G+ GP G
Sbjct: 799 GNPGEIGLPGPPG 811



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 76/152 (50%), Gaps = 15/152 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G  G  G KGE G KG PG           G  G+RG +G  G PGP
Sbjct: 1372 PGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKA---------GASGRRGTQGLQGLPGP 1422

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLPGK 228
            +G+ G +G  G  G  G PGR   DGR G  GE G DG P   G  G  G PG  GLPG 
Sbjct: 1423 RGVVGRQGPEGMAGQDGNPGR---DGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGA 1479

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1480 QGPPGFKGESGLPGQLGPPGKRGTEGGTGLPG 1511



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 81/154 (52%), Gaps = 15/154 (9%)

Query: 113  GLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            G QGP    GQ G  G  G  G +GE+G  G PG VGP          G+RG  G  G P
Sbjct: 1427 GRQGPEGMAGQDGNPGRDGRPGYQGEQGNDGDPGPVGP---------AGRRGNPGVAGLP 1477

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLP 226
            G QG PG +G+ G  G +G PG+ G +G  GLPG   EPG  G PG +G  G PG  GL 
Sbjct: 1478 GAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLF 1537

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G PG  G  G +G  GP G  GK GI G PG
Sbjct: 1538 GPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPG 1571



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 86/171 (50%), Gaps = 18/171 (10%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP- 154
            +V  QG      +   PG  G  G +GE G  G+ G  G  G +G PGV G PG QG P 
Sbjct: 1425 VVGRQGPEGMAGQDGNPGRDGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPG 1484

Query: 155  -----------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                       G  GKRG +G  G PG QG PG +G+ G  G+MG+PG  GL G  G PG
Sbjct: 1485 FKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPG 1544

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            + G  GI G        G  GL GK+GI G  G  G  G+ GP+G+RG  G
Sbjct: 1545 DIGFKGIQGPR------GPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRG 1589



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 87/173 (50%), Gaps = 33/173 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEM------------GVKGERGE---------------KGAPGV 144
            PG QG  G++G  GAKG +            G+ GE G                KG PG 
Sbjct: 1089 PGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGA 1148

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            VG PG   +PGD G +G  G +G PG QG+ G  G+ G +GD+G    +G DG  G  G+
Sbjct: 1149 VGEPG---LPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGP---VGPDGLKGDRGD 1202

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG DG  G  G +G+ G++GLPG  GI G  G  G+ G  G +G RG  G  G
Sbjct: 1203 PGPDGEHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKG 1255



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 81/164 (49%), Gaps = 12/164 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G        G +G  G PG+ G PGP G    +G +G  G  G+PG QG PG E
Sbjct: 667 GQKGDPGLSPGQAHDGAKGNMGLPGLAGNPGPMG---RKGHKGHPGAAGHPGEQGQPGPE 723

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G  G K   GYPGR G  G  G PG  G  G  G  G+ G+PG DG  G  GIPG  G  
Sbjct: 724 GSPGAK---GYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEM 780

Query: 239 GEKGMTGPRGNRGKSGIN------GVPGTPAICAYKRESCSLLP 276
           G  G  G  G RG  G++      G+PG P +     +  +L P
Sbjct: 781 GRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGP 824



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 88/174 (50%), Gaps = 27/174 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGK 159
           PG  G  G++G+ G +G  G KG  G +G PG VG PGP+G            +PG +G+
Sbjct: 708 PGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGE 767

Query: 160 RG------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGL 207
           RG       +G+MG PG    PGD G+RGP G  G PG IGL G  G+       G  G 
Sbjct: 768 RGLPGIPGKRGEMGRPG---FPGDFGERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGP 824

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG  GM G+ G  G PG  G  G  G  G  G  G +G++G  G+ G PG 
Sbjct: 825 VGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGFPGA 878



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 86/190 (45%), Gaps = 42/190 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKG------DM 166
           GP G +G IG  G  G+ G  GE+G PG+ G  G  G    PGD G+RGP G      ++
Sbjct: 745 GPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEI 804

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---- 222
           G PGP G+ G  G  G  G +GYPG  G+ G  G  GEPGL G  G  G+ G+ G     
Sbjct: 805 GLPGPPGVLGLLGDMGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQ 864

Query: 223 --------DGLPGKDGIPGTNGTNGEKGM---------------------TGPRGNRGKS 253
                    G PG  G PG  G  G+KG                       GP G +GK 
Sbjct: 865 GDKGSHGLPGFPGARGKPGPMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGMKGKP 924

Query: 254 GINGVPGTPA 263
           G  G+PG P 
Sbjct: 925 GARGLPGPPG 934



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 98/206 (47%), Gaps = 49/206 (23%)

Query: 111  PPGLQGPIGQKGEIGAKGEM------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            PPG QG IGQ+GE G +G++      G+KG+RG+ G  G  G  G +G+ G+EG  GP G
Sbjct: 1169 PPGEQGLIGQRGEPGLEGDLGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEEGLPGPPG 1228

Query: 165  DMGYPGPQGIP---GDEGKRGPKGDMGYPGRI---------------------------G 194
              G  G +G P   G++G+RG KG  GY G++                           G
Sbjct: 1229 ITGVRGREGKPGSQGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGTPGPKGSRGTLGPMG 1288

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGI---------PGKDGLPGKDG-IPGTNGTNGEKGMT 244
              GR G  GEPGL G    NG  GI          G+ G  G+DG   G  G  GE+G  
Sbjct: 1289 APGRMGAQGEPGLAGY---NGHKGITGPLGPPGPKGEKGEQGEDGKTEGAPGPPGERGPV 1345

Query: 245  GPRGNRGKSGINGVPGTPAICAYKRE 270
            G RG+RG+ G  G PG   +   + E
Sbjct: 1346 GDRGDRGEPGDPGYPGQEGVQGLRGE 1371



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/139 (43%), Positives = 76/139 (54%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            ++G  G++G +G +G  G  GP G QG  G +G+ GP+G  G PG QG  G+ G  G KG
Sbjct: 1046 SRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKG 1105

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             +G PG  G  G  GLPGEPG  G  G  G  G  G  G PG  G PG  G +G KG  G
Sbjct: 1106 FLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLG 1165

Query: 246  PRGNRGKSGINGVPGTPAI 264
            P G  G+ G+ G  G P +
Sbjct: 1166 PLGPPGEQGLIGQRGEPGL 1184



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 78/189 (41%), Gaps = 51/189 (26%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---------------GKRGPKGDMG 167
            +IG  G+ G +G +G+ GA G+ GPPG  G  GDE               G++G  G  G
Sbjct: 908  DIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPG 967

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI----------------- 210
              G +G PGD G+ GP G+ G  G +GL G  G+ GE G  G+                 
Sbjct: 968  LDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 1027

Query: 211  -------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                                G  GM G  G  G  G DG  G  G+ G KG  GPRG  G
Sbjct: 1028 TPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1087

Query: 252  KSGINGVPG 260
            + G  G  G
Sbjct: 1088 QPGQQGAAG 1096



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 52/100 (52%), Gaps = 18/100 (18%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G  G  G +GE G KG+    GE G PGV G  GP+G PGD      +G
Sbjct: 1494 QLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQG 1553

Query: 159  KRGPKGDMGYP---------GPQGIPGDEGKRGPKGDMGY 189
             RGP G MG           GP G+PG +G RG +GD G 
Sbjct: 1554 PRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDWGL 1593


>gi|345784142|ref|XP_533324.3| PREDICTED: macrophage receptor MARCO [Canis lupus familiaris]
          Length = 486

 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL GP G+ G  G KG++G+   KG+RG KG  GV+GPPG QG  GD GK GP G  G+P
Sbjct: 202 GLVGPKGEPGAKGDKGDLGLPGSKGDRGMKGDTGVMGPPGAQGSKGDSGKPGPPGVAGFP 261

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------DGIPGRNGMD 217
           G +G  G  G++G  G  G  G  G  G  G  G PGL            +G  G  G  
Sbjct: 262 GTKGDQGQPGEKGLPGAPGTAGSPGAKGEPGTAGSPGLAGPPGRPGSPGTNGKNGSKGEP 321

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G+ G+ G  G+ G+PG  G  GE G  G  G RG SG+ G  G P +
Sbjct: 322 GLQGQKGTKGESGVPGPAGMKGEMGSPGLEGPRGASGLKGQKGEPGM 368



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 87/178 (48%), Gaps = 42/178 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQGP G  G+ GA G  G +GE+G KG  G+VGP G  G  GD      KGD+G     
Sbjct: 172 GLQGPNGAPGKQGAPGTPGQRGEKGSKGDGGLVGPKGEPGAKGD------KGDLG----- 220

Query: 173 GIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            +PG +G RG KGD   MG PG  G  G  G PG PG+ G PG  G  G PG+ GLPG  
Sbjct: 221 -LPGSKGDRGMKGDTGVMGPPGAQGSKGDSGKPGPPGVAGFPGTKGDQGQPGEKGLPGAP 279

Query: 230 GIPG---------------------------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G                           TNG NG KG  G +G +G  G +GVPG
Sbjct: 280 GTAGSPGAKGEPGTAGSPGLAGPPGRPGSPGTNGKNGSKGEPGLQGQKGTKGESGVPG 337



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/133 (45%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           +KGE G +G  G  G  G  G PG  G++G KGD G  GP+G PG    +G KGD+G PG
Sbjct: 167 IKGEAGLQGPNGAPGKQGAPGTPGQRGEKGSKGDGGLVGPKGEPG---AKGDKGDLGLPG 223

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---GEKGMTGPRG 248
                G  G+ G+ G+ G PG  G  G  GK G PG  G PGT G     GEKG+ G  G
Sbjct: 224 S---KGDRGMKGDTGVMGPPGAQGSKGDSGKPGPPGVAGFPGTKGDQGQPGEKGLPGAPG 280

Query: 249 NRGKSGINGVPGT 261
             G  G  G PGT
Sbjct: 281 TAGSPGAKGEPGT 293



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 73/152 (48%), Gaps = 12/152 (7%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G    T    PPG QG  G  G+ G  G  G  G +G+            QG PG++G 
Sbjct: 228 RGMKGDTGVMGPPGAQGSKGDSGKPGPPGVAGFPGTKGD------------QGQPGEKGL 275

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G  G  G PG +G PG  G  G  G  G PG  G +G++G  GEPGL G  G  G  G+
Sbjct: 276 PGAPGTAGSPGAKGEPGTAGSPGLAGPPGRPGSPGTNGKNGSKGEPGLQGQKGTKGESGV 335

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           PG  G+ G+ G PG  G  G  G+ G +G  G
Sbjct: 336 PGPAGMKGEMGSPGLEGPRGASGLKGQKGEPG 367



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 15/123 (12%)

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           I G+ G +GP G    PG QG PG  G+RG KG  G  G +G  G  G  G+ G  G+PG
Sbjct: 167 IKGEAGLQGPNG---APGKQGAPGTPGQRGEKGSKGDGGLVGPKGEPGAKGDKGDLGLPG 223

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPGTPA 263
             G  G+ G  G+ G    PG  G+ G+ G  GP         +G++G+ G  G+PG P 
Sbjct: 224 SKGDRGMKGDTGVMGP---PGAQGSKGDSGKPGPPGVAGFPGTKGDQGQPGEKGLPGAPG 280

Query: 264 ICA 266
              
Sbjct: 281 TAG 283



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 42/81 (51%)

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  GL G +G PG+ G  G PG+ G  G  G  GL G  G PG  G  G+ G+ G +G+R
Sbjct: 169 GEAGLQGPNGAPGKQGAPGTPGQRGEKGSKGDGGLVGPKGEPGAKGDKGDLGLPGSKGDR 228

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  G  GV G P     K +S
Sbjct: 229 GMKGDTGVMGPPGAQGSKGDS 249



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
           I G+ G +GP    G PG+ G  G  G  GE G  G  G  G  G PG  G  G  G+PG
Sbjct: 167 IKGEAGLQGPN---GAPGKQGAPGTPGQRGEKGSKGDGGLVGPKGEPGAKGDKGDLGLPG 223

Query: 234 TNGTNGEKGMT---GPRGNRGKSGINGVPGTPAICAY 267
           + G  G KG T   GP G +G  G +G PG P +  +
Sbjct: 224 SKGDRGMKGDTGVMGPPGAQGSKGDSGKPGPPGVAGF 260


>gi|50950211|ref|NP_001002980.1| collagen alpha-1(VII) chain precursor [Canis lupus familiaris]
 gi|33149359|gb|AAO64414.1| type VII collagen [Canis lupus familiaris]
          Length = 2936

 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 88/179 (49%), Gaps = 36/179 (20%)

Query: 116  GPIGQKGEIG-----AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD----- 165
            GP G KG+ G     A+GE G  G RGE G PG  GP G  G PG  G+RG KGD     
Sbjct: 2448 GPKGDKGDSGVGLPGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDAGTSG 2507

Query: 166  -----------MGYPGPQGIPGDEGKRG---------PKGDMGYPGRIGLDGR------D 199
                       MG PGP+G  GD G+RG         P+GD G PG  G  G        
Sbjct: 2508 LKGDKGDAALAMGAPGPRGAKGDMGERGLPGIDGDKGPRGDTGNPGEKGTKGEPGDKGSA 2567

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            GL G  GL G  G  G  GIPG  G PGKDG PG  G  G+ G  GPRG +G+ G+ G 
Sbjct: 2568 GLLGARGLTGPKGEPGAAGIPGDPGSPGKDGTPGVRGDKGDTGFMGPRGLKGERGVKGA 2626



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 83/162 (51%), Gaps = 22/162 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QGP+G  GE G KG+        E GAPG+   PG  G PG++G RGP GD+G  G 
Sbjct: 1429 PGPQGPVGPSGEKGEKGDC-------EDGAPGL---PGQPGSPGEQGLRGPSGDIGPKGD 1478

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGKDGL 225
            +G  G  G  G KG+ G PG +G  G  G+ G        G  G  GR G  G PG+ G 
Sbjct: 1479 RGPKGAVGDTGEKGERGSPGPVGPQGLPGVAGRPGAEGPEGPPGPVGRRGEKGEPGRPGD 1538

Query: 226  P--GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            P  G DG     G  GEKG  GP G RG +G+ G  G P + 
Sbjct: 1539 PAVGPDG----TGAKGEKGDVGPTGPRGAAGVKGERGPPGLV 1576



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 79/185 (42%), Gaps = 48/185 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PGL G +G+ G+ GA G  G  G+ G++GAPGV   PG  G+PG  G +G  G  G PG 
Sbjct: 2237 PGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGV---PGSPGLPGPVGPKGEPGQTGTPGQ 2293

Query: 171  --------------PQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
                          P G+ GD  G+ G KGD G PG  G  G  G  GEPG  G  G+ G
Sbjct: 2294 AVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKG 2353

Query: 216  MDGIPGKDGLPGKD-----------------------------GIPGTNGTNGEKGMTGP 246
              G+ G  G PG                               G PG  G  GE G  GP
Sbjct: 2354 APGLKGNKGDPGVGVEGPPGPAGLPGVKGDVGPPGSPGAPGVVGFPGQTGPRGEMGQPGP 2413

Query: 247  RGNRG 251
             G RG
Sbjct: 2414 SGERG 2418



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 85/175 (48%), Gaps = 33/175 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDM 166
            G  GP G KG++G +G  G+ G++G +G  G  G  G +G PGD+      G RG  G  
Sbjct: 2520 GAPGPRGAKGDMGERGLPGIDGDKGPRGDTGNPGEKGTKGEPGDKGSAGLLGARGLTGPK 2579

Query: 167  GYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP------ 211
            G PG  GIPGD G          RG KGD G+ G  GL G  G+ G  GLDG        
Sbjct: 2580 GEPGAAGIPGDPGSPGKDGTPGVRGDKGDTGFMGPRGLKGERGVKGACGLDGEKGDKGEG 2639

Query: 212  ------------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                        G  G  G+PG+ G PGK+G+ G  G  G  G  G +G++G+ G
Sbjct: 2640 GPPGRPGLAGRKGDMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGSKGDQGEKG 2694



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 93/214 (43%), Gaps = 67/214 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------------ 154
            GL GP G+KGE G  GE G  GE G+KGAPG+ G  G  G+                   
Sbjct: 2326 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGLKGNKGDPGVGVEGPPGPAGLPGVKGDVG 2385

Query: 155  -----------GDEGKRGPKGDMGYPGPQGIPG------------------------DEG 179
                       G  G+ GP+G+MG PGP G  G                          G
Sbjct: 2386 PPGSPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGLPGREGPPGPLGPPGPPGSTGVPG 2445

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRN---GMDGIPGKDGLPGKDGIPG 233
              GPKGD G  G +GL G  G  GEPG+   DG PG+    G+ G PG  G  G+ G  G
Sbjct: 2446 ASGPKGDKGDSG-VGLPGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDAG 2504

Query: 234  TNGTNGEK-------GMTGPRGNRGKSGINGVPG 260
            T+G  G+K       G  GPRG +G  G  G+PG
Sbjct: 2505 TSGLKGDKGDAALAMGAPGPRGAKGDMGERGLPG 2538



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 80/173 (46%), Gaps = 33/173 (19%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            +G      E   PG+ G  G +G+ G  GE G KGE G+KG+ G++G  G  G  G+ G 
Sbjct: 2525 RGAKGDMGERGLPGIDGDKGPRGDTGNPGEKGTKGEPGDKGSAGLLGARGLTGPKGEPGA 2584

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD----------- 208
             G  GD G PG  G PG    RG KGD G+ G  GL G  G+ G  GLD           
Sbjct: 2585 AGIPGDPGSPGKDGTPG---VRGDKGDTGFMGPRGLKGERGVKGACGLDGEKGDKGEGGP 2641

Query: 209  -------------GIPGRNGMDGIPGKDGLPGK------DGIPGTNGTNGEKG 242
                         G PG  G  G PGK+GL G       DG PG+ G  GEKG
Sbjct: 2642 PGRPGLAGRKGDMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGSKGDQGEKG 2694



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 98/244 (40%), Gaps = 81/244 (33%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDE 157
            GF  +  E    G QGP G +G  G KG+ G  G++G  G+PG+ G     GP+G PG +
Sbjct: 2104 GFKGAKGEPGSDGDQGPKGDRGMPGIKGDRGEPGQKGLDGSPGLPGERGVAGPEGKPGLQ 2163

Query: 158  GKR---------------------------GPKGDMGYPG-------------------- 170
            G R                           GP G  G PG                    
Sbjct: 2164 GPRGTPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLPG 2223

Query: 171  ---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDG 218
                     PQG PG  G+ G  G  G PGR G  G+D   G PG PG  G+PG  G  G
Sbjct: 2224 PPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGVPGSPGLPGPVGPKG 2283

Query: 219  IPGKDGLPGKD--GIPGTN-----------------GTNGEKGMTGPRGNRGKSGINGVP 259
             PG+ G PG+   G PG                   G  G++G+ GPRG +G++G  G P
Sbjct: 2284 EPGQTGTPGQAVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEP 2343

Query: 260  GTPA 263
            G P 
Sbjct: 2344 GDPG 2347



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 66/136 (48%), Gaps = 34/136 (25%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
            G+ G+ G+ GE G             PG++G++G KGD       G PG EG  GPKG+ 
Sbjct: 1832 GKPGLNGKNGEPGD------------PGEDGRKGEKGD------SGAPGREGHDGPKGER 1873

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G PG  GL G  GLPG+ G             P   G P   G+PG  G  G++G TGP+
Sbjct: 1874 GAPGSPGLQGPPGLPGQMG-------------PSGQGFP---GVPGNTGPKGDRGDTGPK 1917

Query: 248  GNRGKSGINGVPGTPA 263
            G +G  G  G+ G P 
Sbjct: 1918 GEQGLPGERGLRGDPG 1933



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 92/221 (41%), Gaps = 60/221 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP----------- 148
            QG    + +  P G +GP G  G+ G KGE G  G  G +G PGV G P           
Sbjct: 1464 QGLRGPSGDIGPKGDRGPKGAVGDTGEKGERGSPGPVGPQGLPGVAGRPGAEGPEGPPGP 1523

Query: 149  -------GPQGIPGD-------EGKRGPKGDMGYPGPQGIPGDEGKR-----------GP 183
                   G  G PGD        G +G KGD+G  GP+G  G +G+R           GP
Sbjct: 1524 VGRRGEKGEPGRPGDPAVGPDGTGAKGEKGDVGPTGPRGAAGVKGERGPPGLVLPGDPGP 1583

Query: 184  KGDMGYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMDGIPGKDG------- 224
            KGD G  G IGL GR             G PG PG  G  G  G DG  G+ G       
Sbjct: 1584 KGDPGDRGPIGLSGRAGPPGDSGPPGEKGDPGRPGSPGPIGPRGRDGEVGEKGDEGPPGD 1643

Query: 225  -----LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   G+ G+ G  G  G  G  G +G+ G+ G NG PG
Sbjct: 1644 PGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRNGSPG 1684



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 80/148 (54%), Gaps = 17/148 (11%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            G  G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD   RGP G  G  GP G
Sbjct: 1547 GAKGEKGDVGPTGPRGAAGVKGERGPPGLVLPGDPGPKGDPGD---RGPIGLSGRAGPPG 1603

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---------PGRNGMDGIPGKDG 224
              G  G++G  G  G PG IG  GRDG  GE G +G           G  G+ G PG  G
Sbjct: 1604 DSGPPGEKGDPGRPGSPGPIGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARG 1663

Query: 225  LPGK---DGIPGTNGTNGEKGMTGPRGN 249
              G+    G PG +G NG  G +GP+G+
Sbjct: 1664 PVGEKGDQGDPGEDGRNGSPGPSGPKGD 1691



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 47/230 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+QGP G KG  G  G  G +G +G++G PG+ G  G  G  G +G  G  G+ G  GP+
Sbjct: 2098 GVQGPPGFKGAKGEPGSDGDQGPKGDRGMPGIKGDRGEPGQKGLDGSPGLPGERGVAGPE 2157

Query: 173  GIPGDEGKR---------------------------GPKGDMGYPGRIGLDGRDGLP--- 202
            G PG +G R                           GP G  G PG  G  GR       
Sbjct: 2158 GKPGLQGPRGTPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTG 2217

Query: 203  -----------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                             G PGL G  G  G  G PG+DG  GKDG  G  G  G  G+ G
Sbjct: 2218 AVGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGVPGSPGLPG 2277

Query: 246  PRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHI 295
            P G +G+ G  G PG   +     +     P      L+  P   G   +
Sbjct: 2278 PVGPKGEPGQTGTPGQAVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGL 2327



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 77/169 (45%), Gaps = 41/169 (24%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPG-------- 149
            G      E   PG  G  G+KG+ GA   +G  G KGERG  G+PG+ GPPG        
Sbjct: 1835 GLNGKNGEPGDPGEDGRKGEKGDSGAPGREGHDGPKGERGAPGSPGLQGPPGLPGQMGPS 1894

Query: 150  PQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGR----IGL------- 195
             QG PG  G  GPKGD G  GP   QG+PG+ G RG  G +G   R    IG+       
Sbjct: 1895 GQGFPGVPGNTGPKGDRGDTGPKGEQGLPGERGLRGDPGSVGNVERLLETIGIKTSALRE 1954

Query: 196  ----------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                            + R G  G+PG  G PG+ G  G  G+ GL G+
Sbjct: 1955 IVETWDESSGSFLPMPERRRGPKGDPGERGPPGKEGPIGFSGERGLKGE 2003



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 57/113 (50%), Gaps = 25/113 (22%)

Query: 127  KGEMGVKGERGEKG---------------------APGVVGPPGPQGIPGDEGKRGPKGD 165
            +GE G KGERGE+G                      PG    PG  G+ G  G +G KG+
Sbjct: 2056 RGERGEKGERGEQGRDGPPGLPGPPGPPGPKVAVDEPG----PGLSGVQGPPGFKGAKGE 2111

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             G  G QG  GD G  G KGD G PG+ GLDG  GLPGE G+ G  G+ G+ G
Sbjct: 2112 PGSDGDQGPKGDRGMPGIKGDRGEPGQKGLDGSPGLPGERGVAGPEGKPGLQG 2164



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 79/190 (41%), Gaps = 45/190 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---------------RGEKGAPGVVGPPGP------ 150
            PG  GP G+ GE G +G  G  GE               +G+ G PG+   PG       
Sbjct: 1325 PGWPGPRGETGERGPRGPKGEPGEPGRVIGGGGPGLPGQKGDPGLPGL---PGSRGPLGD 1381

Query: 151  --------------QGIPGDEGKRGPKGDM------GYPGPQGIPGDEGKRGPKGDMGYP 190
                          +G  GD G+RGP G        G PG  G+PG  G +GP G  G  
Sbjct: 1382 PGPRGPPGLPGTAVKGDKGDRGERGPPGPGDGSTAPGEPGLPGLPGSPGPQGPVGPSGEK 1441

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G D  DG PG PG  G PG  G+ G  G  G  G  G  G  G  GEKG  G  G  
Sbjct: 1442 GEKG-DCEDGAPGLPGQPGSPGEQGLRGPSGDIGPKGDRGPKGAVGDTGEKGERGSPGPV 1500

Query: 251  GKSGINGVPG 260
            G  G+ GV G
Sbjct: 1501 GPQGLPGVAG 1510



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 99/263 (37%), Gaps = 111/263 (42%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVGP---PGPQGIPGDEGK 159
            PG  GP G+ GE+G KG+ G           GERG +GAPG  GP    G QG PG++G+
Sbjct: 1620 PGPIGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGR 1679

Query: 160  ------RGPKGD-----------------MGYPGPQGIPGDEGK---------------- 180
                   GPKGD                 +G  G +G PGD G+                
Sbjct: 1680 NGSPGPSGPKGDRGEPGPPGLPGRLVDSGLGA-GEKGEPGDRGQEGPRGPKGDPGPPGAS 1738

Query: 181  --------------------RGPKGDMGYPGRIGLDGRDGL------------------P 202
                                RGP G+ G  G  GLDGR GL                   
Sbjct: 1739 GERGVSGLRGPPGPQGDPGVRGPTGEKGDRGPPGLDGRSGLDGKPGAPGPPGPHGATGKA 1798

Query: 203  GEPGLDGIPG---------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G+PG DG+PG                      +G  G+ GK+G PG  G  G  G  G+ 
Sbjct: 1799 GDPGRDGLPGLRGEHGPPGPPGPPGIQGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDS 1858

Query: 242  GMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G+ G  G  G PG+P +
Sbjct: 1859 GAPGREGHDGPKGERGAPGSPGL 1881



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 88/208 (42%), Gaps = 63/208 (30%)

Query: 112  PGLQGPIG------------------QKGEIGAKGEMGVKGERGE--------------- 138
            PGLQGP G                    G  G +G  G+KGE GE               
Sbjct: 2160 PGLQGPRGTPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAV 2219

Query: 139  --------------KGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
                          +GAPG+   VG  G  G PG +G  G  GD G PG  G PG  G  
Sbjct: 2220 GLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGVPGSPGLPGPV 2279

Query: 182  GPKGD---MGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGK 228
            GPKG+    G PG+  +G  G  G  G PG     L G PG  G  G+P   G+ G  G+
Sbjct: 2280 GPKGEPGQTGTPGQAVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGR 2339

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G PG  G +G+KG  G +GN+G  G+ 
Sbjct: 2340 AGEPGDPGEDGQKGAPGLKGNKGDPGVG 2367



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 23/124 (18%)

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            ++GK G  G  G PG    PG++G++G KGD G PGR G DG                 G
Sbjct: 1830 EDGKPGLNGKNGEPG---DPGEDGRKGEKGDSGAPGREGHDGP---------------KG 1871

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEK-----GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
              G PG  GL G  G+PG  G +G+      G TGP+G+RG +G  G  G P     + +
Sbjct: 1872 ERGAPGSPGLQGPPGLPGQMGPSGQGFPGVPGNTGPKGDRGDTGPKGEQGLPGERGLRGD 1931

Query: 271  SCSL 274
              S+
Sbjct: 1932 PGSV 1935



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 70/159 (44%), Gaps = 40/159 (25%)

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---------GLDGRDGLPGEPG----- 206
            G  G  G+PGP+G  G+ G RGPKG+ G PGR+         G  G  GLPG PG     
Sbjct: 1320 GSMGSPGWPGPRGETGERGPRGPKGEPGEPGRVIGGGGPGLPGQKGDPGLPGLPGSRGPL 1379

Query: 207  ---------------LDGIPGRNGMDGIPG-KDG--LPGKDGIPGTNGTNGEKGMTGPRG 248
                           + G  G  G  G PG  DG   PG+ G+PG  G+ G +G  GP G
Sbjct: 1380 GDPGPRGPPGLPGTAVKGDKGDRGERGPPGPGDGSTAPGEPGLPGLPGSPGPQGPVGPSG 1439

Query: 249  NRGKS--------GINGVPGTPAICAYKRESCSLLPNSE 279
             +G+         G+ G PG+P     +  S  + P  +
Sbjct: 1440 EKGEKGDCEDGAPGLPGQPGSPGEQGLRGPSGDIGPKGD 1478



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 61/133 (45%), Gaps = 26/133 (19%)

Query: 100  QGFCNSTKEYCPPGL--QGPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPP 148
            +G      E  PPGL   G  G KG+ G +G +G+ G           GEKG PG  G P
Sbjct: 1561 RGAAGVKGERGPPGLVLPGDPGPKGDPGDRGPIGLSGRAGPPGDSGPPGEKGDPGRPGSP 1620

Query: 149  GPQGIPGDEGKRGPKGD------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
            GP G  G +G+ G KGD             G  G +G PG  G  G KGD G PG    D
Sbjct: 1621 GPIGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGE---D 1677

Query: 197  GRDGLPGEPGLDG 209
            GR+G PG  G  G
Sbjct: 1678 GRNGSPGPSGPKG 1690



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 65/172 (37%), Gaps = 62/172 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG------------------ERGEKGAPGVVGPPGPQGIP 154
            G  GP G KGE G KG  G+ G                   +G+ G PGV   PG  G P
Sbjct: 2610 GFMGPRGLKGERGVKGACGLDGEKGDKGEGGPPGRPGLAGRKGDMGEPGV---PGQSGAP 2666

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGP------------------------------- 183
            G EG  GPKGD G+ G  G  GD+G++G                                
Sbjct: 2667 GKEGLIGPKGDRGFDGQPGSKGDQGEKGERGPPGIGGFPGPRGNDGSSGPPGPPGSVGPK 2726

Query: 184  --------KGDMGYPGR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    KG+ G PG   +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 2727 GPEGLQGQKGERGPPGERMVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAAL 2778


>gi|402892082|ref|XP_003909251.1| PREDICTED: macrophage receptor MARCO-like, partial [Papio anubis]
          Length = 489

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/156 (46%), Positives = 86/156 (55%), Gaps = 12/156 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQGP G  G+ GA G  G +GE+G KG  G+VGP G  G  GD      KGD+G PG +
Sbjct: 174 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLVGPKGETGTKGD------KGDLGLPGSK 227

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G   D+G +G  G MG PG  G  G  G PG PGL G PG  G  G PG  G+PG    P
Sbjct: 228 G---DKGMKGDAGVMGPPGAQGSKGDSGRPGPPGLAGFPGAKGDPGQPGLQGVPGP---P 281

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G KG  G  G+RG +G+ G PG+P     K
Sbjct: 282 GAVGQPGAKGEPGSAGSRGLTGLPGSPGSPGAAGLK 317



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 101/195 (51%), Gaps = 15/195 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GL GP G+ G  G KG++G+   KG++G KG  GV+GPPG QG  GD G+ GP       
Sbjct: 204 GLVGPKGETGTKGDKGDLGLPGSKGDKGMKGDAGVMGPPGAQGSKGDSGRPGPPGLAGFP 263

Query: 163 --KGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
             KGD G PG QG+PG     G+ G KG+ G  G  GL G  G PG PG  G+ G  G  
Sbjct: 264 GAKGDPGQPGLQGVPGPPGAVGQPGAKGEPGSAGSRGLTGLPGSPGSPGAAGLKGSKGDT 323

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G+ G+ G  G+ G+PG  G  G++G  G  G++G  G  G  G   +     E       
Sbjct: 324 GLQGQQGRKGEPGVPGPAGVKGQQGSPGLAGSKGAPGQAGQKGDQGVKGSSGERGVKGEK 383

Query: 278 SETSQLLIPPTIVGS 292
            ET +  +   IVGS
Sbjct: 384 GETGENAVSVRIVGS 398



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 76/154 (49%), Gaps = 3/154 (1%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G  G  G  G +G+ G PG+ G PGP G  G  G +G  G  G  G
Sbjct: 241 PPGAQGSKGDSGRPGPPGLAGFPGAKGDPGQPGLQGVPGPPGAVGQPGAKGEPGSAGSRG 300

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
             G+PG  G  G  G  G  G  GL G+ G  GEP   G+PG  G+ G  G  GL G  G
Sbjct: 301 LTGLPGSPGSPGAAGLKGSKGDTGLQGQQGRKGEP---GVPGPAGVKGQQGSPGLAGSKG 357

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PG  G  G++G+ G  G RG  G  G  G  A+
Sbjct: 358 APGQAGQKGDQGVKGSSGERGVKGEKGETGENAV 391



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 75/167 (44%), Gaps = 24/167 (14%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQ 151
             QG    +    PPGL G  G KG+ G  G  GV G      + G KG PG        
Sbjct: 243 GAQGSKGDSGRPGPPGLAGFPGAKGDPGQPGLQGVPGPPGAVGQPGAKGEPGSA------ 296

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                    G +G  G PG  G PG  G +G KGD G  G+    GR G PG PG  G+ 
Sbjct: 297 ---------GSRGLTGLPGSPGSPGAAGLKGSKGDTGLQGQ---QGRKGEPGVPGPAGVK 344

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G+ G  G+ G  G PG+ G  G  G  G  G  G +G +G++G N V
Sbjct: 345 GQQGSPGLAGSKGAPGQAGQKGDQGVKGSSGERGVKGEKGETGENAV 391



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 17/142 (11%)

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           + G+ G +GP+G  G  G  G PG +G++G KGD G    +G  G  G  G+ G  G+PG
Sbjct: 169 VKGEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGL---VGPKGETGTKGDKGDLGLPG 225

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPGTPA 263
             G  G+ G  G+    G PG  G+ G+ G  GP         +G+ G+ G+ GVPG P 
Sbjct: 226 SKGDKGMKGDAGV---MGPPGAQGSKGDSGRPGPPGLAGFPGAKGDPGQPGLQGVPGPPG 282

Query: 264 ICAYKRESCSLLPNSETSQLLI 285
             A  +      P S  S+ L 
Sbjct: 283 --AVGQPGAKGEPGSAGSRGLT 302


>gi|344264775|ref|XP_003404465.1| PREDICTED: collagen alpha-1(XXI) chain [Loxodonta africana]
          Length = 957

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 83/152 (54%), Gaps = 3/152 (1%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG +GQKGEIG  G  G KG  G  G  G  G PG  G PG +G +G  G  G  GP
Sbjct: 610 PGNQGLMGQKGEIGPPGPQGKKGVPGMHGLMGSDGSPGQPGTPGSKGSKGEPGPQGMAGP 669

Query: 172 QGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G+ G+ G  GP G+   MG PG  G  G  G  GE G+ G  G NG  GIPG+ G+ G 
Sbjct: 670 SGLKGEAGAMGPPGEPGYMGLPGIQGKKGDKGDHGEKGIQGQKGENGKQGIPGQQGIQGH 729

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  GE G  G  G +G+SG++G+ G
Sbjct: 730 HGAKGERGEKGEPGFRGTIGPKGESGMDGLMG 761



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 98/195 (50%), Gaps = 36/195 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  GQ G+ G +G MG  G  G  G  GV G PG +G PG +G++G +G  G+ G 
Sbjct: 466 PGYPGQPGQDGKPGYQGIMGSPGVPGSPGMQGVQGLPGYKGEPGRDGEKGDRGLPGFSGL 525

Query: 172 QGIPGDEGKRGPKGDMGYPG------RIGLDGRDGLPGEPGLDGIPGRNGMDGI------ 219
            G+PG +G+ GPKGD G PG        G  G DG PG PG  G PGR+G DG+      
Sbjct: 526 HGVPGSKGEMGPKGDKGSPGFYGKKGAKGEKGNDGFPGLPGRSGEPGRHGKDGLMGSPGF 585

Query: 220 ---------PGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV--------- 258
                    PG+DGL   PG  G PG  G  G+KG  GP G +GK G+ G+         
Sbjct: 586 KGEAGPPGAPGQDGLRGEPGIPGFPGNQGLMGQKGEIGPPGPQGKKGVPGMHGLMGSDGS 645

Query: 259 ---PGTPAICAYKRE 270
              PGTP     K E
Sbjct: 646 PGQPGTPGSKGSKGE 660



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 88/169 (52%), Gaps = 18/169 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGA------------PGVVGPPGPQGIPGDEGKR 160
           GL G  G  G  G+KGEMG KG++G  G              G  G PG  G PG  GK 
Sbjct: 518 GLPGFSGLHGVPGSKGEMGPKGDKGSPGFYGKKGAKGEKGNDGFPGLPGRSGEPGRHGKD 577

Query: 161 GPKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G  G+    GP G PG +G RG  G  G+PG  GL G+ G  G PG  G  G  GM 
Sbjct: 578 GLMGSPGFKGEAGPPGAPGQDGLRGEPGIPGFPGNQGLMGQKGEIGPPGPQGKKGVPGMH 637

Query: 218 GIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPA 263
           G+ G DG PG+ G PG+ G+ GE   +GM GP G +G++G  G PG P 
Sbjct: 638 GLMGSDGSPGQPGTPGSKGSKGEPGPQGMAGPSGLKGEAGAMGPPGEPG 686



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 86/158 (54%), Gaps = 6/158 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  G  G+ G+ G  G  G KGE G  GAPG   + G PG  G PG++G  G KG++G 
Sbjct: 565 PGRSGEPGRHGKDGLMGSPGFKGEAGPPGAPGQDGLRGEPGIPGFPGNQGLMGQKGEIGP 624

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGPQG  G  G  G  G  G PG+ G  G  G  GEPG  G+ G +G+ G  G  G PG+
Sbjct: 625 PGPQGKKGVPGMHGLMGSDGSPGQPGTPGSKGSKGEPGPQGMAGPSGLKGEAGAMGPPGE 684

Query: 229 DG---IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G   +PG  G  G+KG  G +G +G+ G NG  G P 
Sbjct: 685 PGYMGLPGIQGKKGDKGDHGEKGIQGQKGENGKQGIPG 722



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 101/207 (48%), Gaps = 12/207 (5%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG      E  PPG QG  G  G  G  G  G  G+ G  G+ G  G PGPQG+ G  G 
Sbjct: 613 QGLMGQKGEIGPPGPQGKKGVPGMHGLMGSDGSPGQPGTPGSKGSKGEPGPQGMAGPSGL 672

Query: 160 RGPKGDMGYPGP---QGIPGDEGKRGPKGDMG---YPGRIGLDGRDGLPGEPGLDGIPGR 213
           +G  G MG PG     G+PG +GK+G KGD G     G+ G +G+ G+PG+ G+ G  G 
Sbjct: 673 KGEAGAMGPPGEPGYMGLPGIQGKKGDKGDHGEKGIQGQKGENGKQGIPGQQGIQGHHGA 732

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------RGKSGINGVPGTPAICAY 267
            G  G  G+ G  G  G  G +G +G  G  GP+G       RG  G++G PG      +
Sbjct: 733 KGERGEKGEPGFRGTIGPKGESGMDGLMGPVGPKGQPGETGPRGPPGLDGKPGKEFSEQF 792

Query: 268 KRESCSLLPNSETSQLLIPPTIVGSEH 294
            R+ C+ +  ++   LL    I   +H
Sbjct: 793 IRQVCADVLRAQLPVLLRSERIQNCDH 819



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 78/161 (48%), Gaps = 27/161 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G +G KG PG+ G PG  G PG +GK G +G MG PG  G PG +G +G  G  G P
Sbjct: 449 GNPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIMGSPGVPGSPGMQGVQGLPGYKGEP 508

Query: 191 GRIGLDGRDGLPGEPGLDGIPGR---------------------------NGMDGIPGKD 223
           GR G  G  GLPG  GL G+PG                            +G  G+PG+ 
Sbjct: 509 GRDGEKGDRGLPGFSGLHGVPGSKGEMGPKGDKGSPGFYGKKGAKGEKGNDGFPGLPGRS 568

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG+ G  G  G+ G KG  GP G  G+ G+ G PG P  
Sbjct: 569 GEPGRHGKDGLMGSPGFKGEAGPPGAPGQDGLRGEPGIPGF 609



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 58/111 (52%), Gaps = 12/111 (10%)

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG+ G +GPKGD G PG  G PG             PG+ G  G  G+ G PG+ G PG 
Sbjct: 448 PGNPGLQGPKGDPGLPGNPGYPGQ------------PGQDGKPGYQGIMGSPGVPGSPGM 495

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G+ G+PG  G PG+DG  G  G  G  G+ G  G++G+ G  G  G+P  
Sbjct: 496 QGVQGLPGYKGEPGRDGEKGDRGLPGFSGLHGVPGSKGEMGPKGDKGSPGF 546



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 15/112 (13%)

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           PPG  G+ G +G  G  G+ GYP   G PG +GK G +G MG P         G+PG PG
Sbjct: 447 PPGNPGLQGPKGDPGLPGNPGYP---GQPGQDGKPGYQGIMGSP---------GVPGSPG 494

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGI 255
           + G+ G  G  G PG+DG  G  G+PG +G +   G KG  GP+G++G  G 
Sbjct: 495 MQGVQGLPGYKGEPGRDGEKGDRGLPGFSGLHGVPGSKGEMGPKGDKGSPGF 546



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L  +QG      ++   G+QG  G+ G+ G  G+ G++G  G KG  G  G PG +G  G
Sbjct: 690 LPGIQGKKGDKGDHGEKGIQGQKGENGKQGIPGQQGIQGHHGAKGERGEKGEPGFRGTIG 749

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            +G+ G  G MG  GP+G PG+ G RGP G  G PG+
Sbjct: 750 PKGESGMDGLMGPVGPKGQPGETGPRGPPGLDGKPGK 786


>gi|410959496|ref|XP_003986343.1| PREDICTED: collagen alpha-1(IX) chain [Felis catus]
          Length = 921

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/186 (45%), Positives = 104/186 (55%), Gaps = 24/186 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G +GE+G +G                +GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEQGEVGAQGPPGAQGLRGITGIVGAKGEKG 484

Query: 141 APGVVGPPGPQGI---PGDEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIG 194
           A G+ G PGPQG+   PGD+G+RGP G+ G     GPQG  G  G  G KGD G P   G
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGETGPKGDRGPQGSRGIPGVPGSKGDTGLP---G 541

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           +DGRDG+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G+ G
Sbjct: 542 VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLG 601

Query: 255 INGVPG 260
            +G PG
Sbjct: 602 NSGKPG 607



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 63/115 (54%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGEQGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G TGP+G+RG  G  G+PG P 
Sbjct: 478 GAKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGETGPKGDRGPQGSRGIPGVPG 532



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 77/153 (50%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L  + G   +  E    GL G  G +G  GA G+ G +G  GE G  G  GP G +GIPG
Sbjct: 470 LRGITGIVGAKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGETGPKGDRGPQGSRGIPG 529

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G +G  G  G  G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G
Sbjct: 530 VPGSKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKG 589

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G PGK G  G  G PG  G  GE G  GPRG
Sbjct: 590 NTGAPGKPGQLGNSGKPGQQGPPGEVGPRGPRG 622



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/140 (44%), Positives = 76/140 (54%), Gaps = 6/140 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---PGPQGIPGDEGKR 181
           G  G  G+ G RG KGA G +G PG QG  G+EG +G +G++G    PG QG+ G  G  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEQGEVGAQGPPGAQGLRGITGIV 477

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G KG+ G  G  G  G  GLPG PG  G  G  G  G  G  G  G  GIPG  G+ G+ 
Sbjct: 478 GAKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGETGPKGDRGPQGSRGIPGVPGSKGDT 537

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G+    G  G+ GI G+PGT
Sbjct: 538 GLP---GVDGRDGIPGMPGT 554



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 67/130 (51%), Gaps = 6/130 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G +G  G++G  GV G +G+ G PGV G  G  G+PG +
Sbjct: 496 GLPGAPGDQGQRGPPGETGPKGDRGPQGSRGIPGVPGSKGDTGLPGVDGRDGIPGMPGTK 555

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG+ G PG+ G  G  G PG+ G  G  
Sbjct: 556 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGNSGKPGQQGPPGEV 615

Query: 212 GRNGMDGIPG 221
           G  G  G+PG
Sbjct: 616 GPRGPRGLPG 625



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 49/91 (53%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGD+G  G +G PG    RGPKG         
Sbjct: 812 QMGLRGLPGIKGPPGALGL------RGPKGDLGERGERGPPG----RGPKG--------- 852

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPGEPG     GRNG DG  G  G+
Sbjct: 853 LPGATGLPGEPGPASY-GRNGRDGERGPPGV 882



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 12/81 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
           +MG++G  G KG PG +G  GP+G  G+ G+RGP  +G  G PG  G+PG+ G       
Sbjct: 812 QMGLRGLPGIKGPPGALGLRGPKGDLGERGERGPPGRGPKGLPGATGLPGEPG------- 864

Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
              P   G +GRDG  G PG+
Sbjct: 865 ---PASYGRNGRDGERGPPGV 882



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 42/81 (51%), Gaps = 18/81 (22%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG +G PG  G RGPKGD+G               E G  G PGR G  G+PG  GLP
Sbjct: 817 GLPGIKGPPGALGLRGPKGDLG---------------ERGERGPPGR-GPKGLPGATGLP 860

Query: 227 GKDGIP--GTNGTNGEKGMTG 245
           G+ G    G NG +GE+G  G
Sbjct: 861 GEPGPASYGRNGRDGERGPPG 881



 Score = 40.0 bits (92), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 61/140 (43%), Gaps = 51/140 (36%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGK--------- 159
           PG +G  G+KG  GA G   ++G  G+ G++G PG VGP GP+G+PG  G+         
Sbjct: 579 PGAKGVAGEKGNTGAPGKPGQLGNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPVGPPGP 638

Query: 160 ------------------------RGPKGDMGYPGPQGIPG---------------DEGK 180
                                   +G +G +G PGP+G  G               D G 
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGAVGEPGPKGEQGSSGEEGEAGERGELGDIGL 698

Query: 181 RGPKGDMGYPGRIGLDGRDG 200
            GPKG +G PG  GL G +G
Sbjct: 699 PGPKGSVGNPGDPGLRGPEG 718


>gi|149059591|gb|EDM10529.1| procollagen, type XXVII, alpha 1, isoform CRA_a [Rattus norvegicus]
          Length = 1836

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 100/186 (53%), Gaps = 22/186 (11%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +GP+G +G+   +GE G  G  G++G  G+ G PG QG PG  G RG       PG
Sbjct: 1320 PPGERGPVGDRGD---RGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRG------RPG 1370

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            P+G  G+EG +G  G  G  GR G  G  GLPG     G+ GR G +G+ G+DG PG+DG
Sbjct: 1371 PKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGP---RGVVGRQGPEGMAGQDGNPGRDG 1427

Query: 231  IP---GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPP 287
             P   G  G +G+ G  GP G RG  G+ G+PG      +K ES   LP       L PP
Sbjct: 1428 RPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPP 1480

Query: 288  TIVGSE 293
               G+E
Sbjct: 1481 GKRGTE 1486



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 90/170 (52%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  GA G  G +G+ G +G+PG  G PG QG PG  G  GPKG  GY   
Sbjct: 678 PGPMGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGL 737

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGK 222
           PG  G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG  G+ G PG 
Sbjct: 738 PGLFGLPGSDGER---GLPGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 794

Query: 223 DGL------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL            PG  G+ G  G  GE G+ G +G +G  G++G PG
Sbjct: 795 LGLLGDMGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPG 844



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 86/169 (50%), Gaps = 18/169 (10%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  GA GE G+ G+ G KG  G +GPPG QG+ G  G+ G +GD+G  GP G+ GD
Sbjct: 1122 MGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGPVGPDGLKGD 1181

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
             G  GP G+ G  G+ GL G +GLPG PG+ G+ GR G  G  G+ G  G  G  G  G 
Sbjct: 1182 RGDPGPDGEHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKGYQGQ 1241

Query: 238  NGE------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             GE                  +G  GP G  G+ G  G PG      +K
Sbjct: 1242 LGEMGIPGDPGPPGTPGPKGSRGTLGPMGAPGRMGAQGEPGLAGYNGHK 1290



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 83/158 (52%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KGE G KG+ G  G  G +G  G+ G PGP+G+ G +G  G  G  G PG
Sbjct: 1365 PRGRPGPKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGPRGVVGRQGPEGMAGQDGNPG 1424

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              G PG +G++G  GD G  G  G  G  G+ G PG  G PG  G  G+PG+ G PGK G
Sbjct: 1425 RDGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRG 1484

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G  G  G +G  G +G  G SG  G PG   +   K
Sbjct: 1485 TEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPK 1522



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 94/198 (47%), Gaps = 36/198 (18%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G         P G  GP G KG +G  GE G+KG++GE+G PGV       G PG +G +
Sbjct: 796 GLLGDMGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGV------SGDPGFQGDK 849

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEP 205
           G  G  G+PG +G PG  GK G KG               D+G PG  G +G  G PG  
Sbjct: 850 GSHGLPGFPGARGKPGPMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGMKGKPGAR 909

Query: 206 GLDGIPGRNG---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           GL G PG+ G               ++G PG+ G PG+ G+ G+ G  G+ G  GP G +
Sbjct: 910 GLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQ 969

Query: 251 GKSGINGVPGTPAICAYK 268
           G  G  G+ G P I   K
Sbjct: 970 GLMGFVGLVGEPGIVGEK 987



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/133 (50%), Positives = 73/133 (54%), Gaps = 12/133 (9%)

Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GAKG MG+ G          +G KG PG  G PG QG PG EG  G K   GYPG QG P
Sbjct: 664 GAKGNMGLPGLAGNPGPMGRKGHKGHPGAAGHPGEQGQPGPEGSPGAK---GYPGRQGFP 720

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G  GPKG  GY G  GL G  G  GE GL GIPG+ G  G PG  G  G+ G PG +
Sbjct: 721 GPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEMGRPGFPGDFGERGPPGLD 780

Query: 236 GTNGEKGMTGPRG 248
           G  GE G+ GP G
Sbjct: 781 GNPGEIGLPGPPG 793



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 76/152 (50%), Gaps = 15/152 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G  G  G KGE G KG PG           G  G+RG +G  G PGP
Sbjct: 1354 PGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKA---------GASGRRGTQGLQGLPGP 1404

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLPGK 228
            +G+ G +G  G  G  G PGR   DGR G  GE G DG P   G  G  G PG  GLPG 
Sbjct: 1405 RGVVGRQGPEGMAGQDGNPGR---DGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGA 1461

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1462 QGPPGFKGESGLPGQLGPPGKRGTEGGTGLPG 1493



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 81/154 (52%), Gaps = 15/154 (9%)

Query: 113  GLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            G QGP    GQ G  G  G  G +GE+G  G PG VGP          G+RG  G  G P
Sbjct: 1409 GRQGPEGMAGQDGNPGRDGRPGYQGEQGNDGDPGPVGP---------AGRRGNPGVAGLP 1459

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLP 226
            G QG PG +G+ G  G +G PG+ G +G  GLPG   EPG  G PG +G  G PG  GL 
Sbjct: 1460 GAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLF 1519

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G PG  G  G +G  GP G  GK GI G PG
Sbjct: 1520 GPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPG 1553



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 86/171 (50%), Gaps = 18/171 (10%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            +V  QG      +   PG  G  G +GE G  G+ G  G  G +G PGV G PG QG PG
Sbjct: 1407 VVGRQGPEGMAGQDGNPGRDGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPG 1466

Query: 156  ------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                          GKRG +G  G PG QG PG +G+ G  G+MG+PG  GL G  G PG
Sbjct: 1467 FKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPG 1526

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            + G  GI G        G  GL GK+GI G  G  G  G+ GP+G+RG  G
Sbjct: 1527 DIGFKGIQGPR------GPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRG 1571



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 87/173 (50%), Gaps = 33/173 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEM------------GVKGERGE---------------KGAPGV 144
            PG QG  G++G  GAKG +            G+ GE G                KG PG 
Sbjct: 1071 PGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGA 1130

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            VG PG   +PGD G +G  G +G PG QG+ G  G+ G +GD+G    +G DG  G  G+
Sbjct: 1131 VGEPG---LPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGP---VGPDGLKGDRGD 1184

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG DG  G  G +G+ G++GLPG  GI G  G  G+ G  G +G RG  G  G
Sbjct: 1185 PGPDGEHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKG 1237



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 88/174 (50%), Gaps = 27/174 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGK 159
           PG  G  G++G+ G +G  G KG  G +G PG VG PGP+G            +PG +G+
Sbjct: 690 PGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGE 749

Query: 160 R------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGL 207
           R      G +G+MG P   G PGD G+RGP G  G PG IGL G  G+       G  G 
Sbjct: 750 RGLPGIPGKRGEMGRP---GFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGP 806

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG  GM G+ G  G PG  G  G  G  G  G  G +G++G  G+ G PG 
Sbjct: 807 VGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGFPGA 860



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 86/190 (45%), Gaps = 42/190 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKG------DM 166
           GP G +G IG  G  G+ G  GE+G PG+ G  G  G    PGD G+RGP G      ++
Sbjct: 727 GPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEI 786

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---- 222
           G PGP G+ G  G  G  G +GYPG  G+ G  G  GEPGL G  G  G+ G+ G     
Sbjct: 787 GLPGPPGVLGLLGDMGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQ 846

Query: 223 --------DGLPGKDGIPGTNGTNGEKGM---------------------TGPRGNRGKS 253
                    G PG  G PG  G  G+KG                       GP G +GK 
Sbjct: 847 GDKGSHGLPGFPGARGKPGPMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGMKGKP 906

Query: 254 GINGVPGTPA 263
           G  G+PG P 
Sbjct: 907 GARGLPGPPG 916



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 18/166 (10%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G  G PG+ G PGP G          KG  G+PG  G PG++G
Sbjct: 650 QKGDPGLSPGQAHDGAKGNMGLPGLAGNPGPMGR---------KGHKGHPGAAGHPGEQG 700

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR G  G  G PG  G  G  G  G+ G+PG DG  G  GIPG  G
Sbjct: 701 QPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRG 760

Query: 237 TNGEKGMTGPRGNRGKSGIN------GVPGTPAICAYKRESCSLLP 276
             G  G  G  G RG  G++      G+PG P +     +  +L P
Sbjct: 761 EMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGP 806



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 98/206 (47%), Gaps = 49/206 (23%)

Query: 111  PPGLQGPIGQKGEIGAKGEM------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            PPG QG IGQ+GE G +G++      G+KG+RG+ G  G  G  G +G+ G+EG  GP G
Sbjct: 1151 PPGEQGLIGQRGEPGLEGDLGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEEGLPGPPG 1210

Query: 165  DMGYPGPQGIP---GDEGKRGPKGDMGYPGRI---------------------------G 194
              G  G +G P   G++G+RG KG  GY G++                           G
Sbjct: 1211 ITGVRGREGKPGSQGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGTPGPKGSRGTLGPMG 1270

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGI---------PGKDGLPGKDG-IPGTNGTNGEKGMT 244
              GR G  GEPGL G    NG  GI          G+ G  G+DG   G  G  GE+G  
Sbjct: 1271 APGRMGAQGEPGLAGY---NGHKGITGPLGPPGPKGEKGEQGEDGKTEGAPGPPGERGPV 1327

Query: 245  GPRGNRGKSGINGVPGTPAICAYKRE 270
            G RG+RG+ G  G PG   +   + E
Sbjct: 1328 GDRGDRGEPGDPGYPGQEGVQGLRGE 1353



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/139 (43%), Positives = 76/139 (54%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            ++G  G++G +G +G  G  GP G QG  G +G+ GP+G  G PG QG  G+ G  G KG
Sbjct: 1028 SRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKG 1087

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             +G PG  G  G  GLPGEPG  G  G  G  G  G  G PG  G PG  G +G KG  G
Sbjct: 1088 FLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLG 1147

Query: 246  PRGNRGKSGINGVPGTPAI 264
            P G  G+ G+ G  G P +
Sbjct: 1148 PLGPPGEQGLIGQRGEPGL 1166



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 78/189 (41%), Gaps = 51/189 (26%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---------------GKRGPKGDMG 167
            +IG  G+ G +G +G+ GA G+ GPPG  G  GDE               G++G  G  G
Sbjct: 890  DIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPG 949

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI----------------- 210
              G +G PGD G+ GP G+ G  G +GL G  G+ GE G  G+                 
Sbjct: 950  LDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 1009

Query: 211  -------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                                G  GM G  G  G  G DG  G  G+ G KG  GPRG  G
Sbjct: 1010 TPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1069

Query: 252  KSGINGVPG 260
            + G  G  G
Sbjct: 1070 QPGQQGAAG 1078



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 52/100 (52%), Gaps = 18/100 (18%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G  G  G +GE G KG+    GE G PGV G  GP+G PGD      +G
Sbjct: 1476 QLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQG 1535

Query: 159  KRGPKGDMGYP---------GPQGIPGDEGKRGPKGDMGY 189
             RGP G MG           GP G+PG +G RG +GD G 
Sbjct: 1536 PRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDWGL 1575


>gi|326426687|gb|EGD72257.1| hypothetical protein PTSG_00277 [Salpingoeca sp. ATCC 50818]
          Length = 2847

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 98/200 (49%), Gaps = 33/200 (16%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            A  G    T +  P G QG  G+ GE+G    +G  G  G +GEKG  G  G PGP+G P
Sbjct: 2253 ASNGANGDTGDTGPAGPQGVKGRDGEVGLEGPRGRPGTDGAKGEKGIAGTPGAPGPRGRP 2312

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIP 211
            G++G  G KG  G  GP G  G +G  G  GD G  G  GL GR   DG+PG PG DG  
Sbjct: 2313 GEDGLDGRKGRRGDTGPAGSDGSDGANGANGDKGLTGPEGLKGRQGEDGIPGTPGFDGTD 2372

Query: 212  GR------------------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT--------- 244
            G                   +G+DG PG DG PG DG PG +G  G KG+          
Sbjct: 2373 GAVGDPGINGPRGEKGERGIDGIDGNPGTDGNPGADGAPGPDGAKGVKGVAGDRGDDGTP 2432

Query: 245  GPRGNRGKSGINGVPGTPAI 264
            GPRG RG  G +G  GTP +
Sbjct: 2433 GPRGERGDIGPDGADGTPGV 2452



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/185 (43%), Positives = 101/185 (54%), Gaps = 33/185 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY- 168
           G+QGP G KG  G  G  G  G++GEKG  G  G    PGP+G PG +G +G +GD G  
Sbjct: 97  GIQGPKGDKGRQGTPGFDGTNGDKGEKGVRGPSGEDGLPGPRGFPGRDGDKGERGDTGRQ 156

Query: 169 --PGPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPG------LDGIPGRNGMD 217
             PG  G+PG +G+RGP+G   D G PG  G +GR G  G PG       DG PG +G+D
Sbjct: 157 GDPGVDGVPGRKGQRGPQGASGDNGTPGNDGTNGRKGQRGAPGPDGTPGTDGAPGVDGVD 216

Query: 218 GIP------GKDGLPGKDGIPGTNGTNGE------------KGMTGPRGNRGKSGINGVP 259
           G P      G+DGLPG  G PGT+G +G             +G TG +G RG+ G+NG  
Sbjct: 217 GNPGPQGPRGEDGLPGAVGDPGTDGFDGTDGVRGDRGDKGFRGATGAQGARGEDGLNGDA 276

Query: 260 GTPAI 264
           G P  
Sbjct: 277 GDPGF 281



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/176 (44%), Positives = 95/176 (53%), Gaps = 12/176 (6%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
            GF   T    P G  GP G  G  G  G  G KG+RGE+G  G VG PG     G PG +
Sbjct: 2193 GFSGLTGTDGPRGPAGPDGIPGTPGTDGTDGAKGQRGERGDTGPVGAPGFDGTDGTPGRD 2252

Query: 158  ---GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIP 211
               G  G  GD G  GPQG+ G +G+ G +G  G PG  G  G  G+   PG PG  G P
Sbjct: 2253 ASNGANGDTGDTGPAGPQGVKGRDGEVGLEGPRGRPGTDGAKGEKGIAGTPGAPGPRGRP 2312

Query: 212  GRNGMDGIPGK---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G +G+DG  G+    G  G DG  G NG NG+KG+TGP G +G+ G +G+PGTP  
Sbjct: 2313 GEDGLDGRKGRRGDTGPAGSDGSDGANGANGDKGLTGPEGLKGRQGEDGIPGTPGF 2368



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 114/252 (45%), Gaps = 10/252 (3%)

Query: 35   RFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLN-AYSR 93
            R R   D  KG+      P  P     P +   + R+  +       ++     N A   
Sbjct: 2285 RGRPGTDGAKGEKGIAGTPGAPGPRGRPGEDGLDGRKGRRGDTGPAGSDGSDGANGANGD 2344

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
              L   +G      E   PG  G  G  G +G  G  G +GE+GE+G  G+ G PG  G 
Sbjct: 2345 KGLTGPEGLKGRQGEDGIPGTPGFDGTDGAVGDPGINGPRGEKGERGIDGIDGNPGTDGN 2404

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------EPGL 207
            PG +G  GP G  G  G  G  GD+G  GP+G+ G    IG DG DG PG       PGL
Sbjct: 2405 PGADGAPGPDGAKGVKGVAGDRGDDGTPGPRGERGD---IGPDGADGTPGVDGSNGSPGL 2461

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             G  G  G+ G PG DGLPG DG PG  G  G +G  GP G +G+SG++G  G P +   
Sbjct: 2462 KGQRGFTGLVGEPGDDGLPGSDGAPGPAGPKGLRGTAGPAGRQGESGLDGDVGEPGLPGE 2521

Query: 268  KRESCSLLPNSE 279
              E  +   + E
Sbjct: 2522 PGEDGADGADGE 2533



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 91/161 (56%), Gaps = 13/161 (8%)

Query: 114 LQGPI-GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           L+ P+ GQ+G+ G  G+ G++G +G+KG  G  G  G  G  G++G RGP G+ G PGP+
Sbjct: 79  LKAPLKGQRGDPGDMGDNGIQGPKGDKGRQGTPGFDGTNGDKGEKGVRGPSGEDGLPGPR 138

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------PGLDGIPGRNGMDGIP 220
           G PG +G +G +GD G  G  G+DG  G  G+            PG DG  GR G  G P
Sbjct: 139 GFPGRDGDKGERGDTGRQGDPGVDGVPGRKGQRGPQGASGDNGTPGNDGTNGRKGQRGAP 198

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G DG PG DG PG +G +G  G  GPRG  G  G  G PGT
Sbjct: 199 GPDGTPGTDGAPGVDGVDGNPGPQGPRGEDGLPGAVGDPGT 239



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 88/180 (48%), Gaps = 12/180 (6%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGV 144
               QG      +   PGL G  G+ G  GA GE G  G RG+KG            A G 
Sbjct: 2501 AGRQGESGLDGDVGEPGLPGEPGEDGADGADGEDGTPGARGDKGFAGTPGTDGEPGADGA 2560

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             G PGP+GI G  G   P G  G PG  G  G +G RGP G  G  G  GL G  G PGE
Sbjct: 2561 DGAPGPRGIKGRAGSNAPDGAPGDPGFTGTDGAQGPRGPDGPAGRDGLQGLKGGRGDPGE 2620

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             GL G PG  G+ G  G+DG  G  G  G  G +G++G  GP G  G +G +G PGTP +
Sbjct: 2621 AGLLGAPGDVGLKGARGRDGEKGVKGFRGHLGADGDEGERGPMGPMGDTGTDGRPGTPGL 2680



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 101/232 (43%), Gaps = 53/232 (22%)

Query: 74   KEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK 133
            K +  +  +N        S IP    +G    T E    GL+G  G  G  G +G  G K
Sbjct: 1796 KGETGNRGDNGATGDRGDSGIP--GDKGIKGRTGED---GLRGEPGFDGTDGRRGMQGDK 1850

Query: 134  GERGEKGAPGVVGPPGPQGIPGDEGK---------------------------RGPKG-- 164
            G RG  GA G+ G PGP+G PGD G                            RGPKG  
Sbjct: 1851 GFRGADGADGIDGSPGPRGAPGDSGADGRPGEDGLNGTPGVDGGPGDPGDAGARGPKGFR 1910

Query: 165  -DMGYPGPQGIPGDEGKRGPKGDMGYPGRIG---------------LDGRDGLPGEPGLD 208
               G PG  G PGD+G+RG  G+ G PG  G               LDG DG PG PG  
Sbjct: 1911 GADGTPGTDGTPGDKGQRGDAGETGLPGPSGESGDKGFKGQRGVDGLDGTDGAPGAPGAQ 1970

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G  G  G PG DG+P   G +GEKG  GP+G  G+ G+ G PG
Sbjct: 1971 GESGLKGQPGDAGFRGAPGSDGVP---GEDGEKGERGPQGRAGEDGLIGAPG 2019



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 102/223 (45%), Gaps = 57/223 (25%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIG------------------------AKGEMGVKGER 136
            GF  +      PG+ GP G+KGE G                        AKG  GV G+R
Sbjct: 2367 GFDGTDGAVGDPGINGPRGEKGERGIDGIDGNPGTDGNPGADGAPGPDGAKGVKGVAGDR 2426

Query: 137  GEKGAPGV------VGPPGPQGIPGDEG---------KRGPKGDMGYPGPQGIPGDEGKR 181
            G+ G PG       +GP G  G PG +G         +RG  G +G PG  G+PG +G  
Sbjct: 2427 GDDGTPGPRGERGDIGPDGADGTPGVDGSNGSPGLKGQRGFTGLVGEPGDDGLPGSDGAP 2486

Query: 182  GP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK------D 229
            GP      +G  G  GR G  G DG  GEPGL G PG +G DG  G+DG PG        
Sbjct: 2487 GPAGPKGLRGTAGPAGRQGESGLDGDVGEPGLPGEPGEDGADGADGEDGTPGARGDKGFA 2546

Query: 230  GIPGTN---GTNGEKGMTGPRGNRGKSGIN---GVPGTPAICA 266
            G PGT+   G +G  G  GPRG +G++G N   G PG P    
Sbjct: 2547 GTPGTDGEPGADGADGAPGPRGIKGRAGSNAPDGAPGDPGFTG 2589



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 78/141 (55%), Gaps = 21/141 (14%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIG 194
           +KGA G  G PG   +PG +G RGP+G  G  G  G+   PG +G++G KGD G+ G  G
Sbjct: 643 DKGARGRTGDPG---VPGTDGARGPQGPAGRAGEDGLNGTPGRDGEQGLKGDPGFDGTDG 699

Query: 195 LDGR---------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           +DGR                G PGE GLDG  G+ G  G PG DG PG DG PG  G  G
Sbjct: 700 VDGRPGPRGATGARGSRGETGSPGEDGLDGRKGQRGPSGTPGSDGTPGADGTPGVTGDKG 759

Query: 240 EKGMTGPRGNRGKSGINGVPG 260
            +G +GP+G  G+ G +G PG
Sbjct: 760 VRGPSGPQGPAGRDGADGAPG 780



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 79/152 (51%), Gaps = 18/152 (11%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG------- 176
            +G  G  G KGERG+ G PG   P GP+G  G++G  G  GD G+ G  G PG       
Sbjct: 1006 VGYDGVDGAKGERGDAGTPG---PRGPKGFAGNDGIDGAPGDKGFQGTPGTPGRDGEDGL 1062

Query: 177  -----DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                 D+G RG  GD G PG    +G DG+PG  G  G PG  G+ G+ G  G  G DGI
Sbjct: 1063 VGPAGDQGPRGAPGDTGNPG---ANGSDGVPGSDGPRGAPGEQGLKGLRGDPGFDGTDGI 1119

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G NG NG  G  G RG++G  G  G  GTP 
Sbjct: 1120 DGRNGANGAPGPDGARGSQGDRGDRGASGTPG 1151



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 88/159 (55%), Gaps = 9/159 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+ G  G  G  G  G  G KG+ GE G  G  G  G  G+ GD+G  GPKG   Y GP
Sbjct: 2063 PGVPGLTGTDGPRGPDGSTGAKGDTGEPGFDGAEGVKGLTGVAGDKGVLGPKG---YSGP 2119

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKDGLPGK 228
            +G PG +G  G  G +G PG  G+ G  G PG  G+D   G+ G +G++G PG DG PG 
Sbjct: 2120 KGDPGLDGTDGADGAVGDPGPSGIPGPSGTPGSDGVDGPKGLRGDDGVNGTPGSDGAPGP 2179

Query: 229  DGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  GT G+    G+TG  G RG +G +G+PGTP  
Sbjct: 2180 VGDTGPQGTRGDPGFSGLTGTDGPRGPAGPDGIPGTPGT 2218



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 86/157 (54%), Gaps = 18/157 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAP------GVVGPPGPQGIPGDEGKRGPKGDM 166
           G QGP G+ GE G  G  G  GE+G KG P      GV G PGP+G     G RG +G+ 
Sbjct: 663 GPQGPAGRAGEDGLNGTPGRDGEQGLKGDPGFDGTDGVDGRPGPRGA---TGARGSRGET 719

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------DGIPGRNGMDGIP 220
           G PG  G+ G +G+RGP G  G  G  G DG  G+ G+ G+       G  GR+G DG P
Sbjct: 720 GSPGEDGLDGRKGQRGPSGTPGSDGTPGADGTPGVTGDKGVRGPSGPQGPAGRDGADGAP 779

Query: 221 GK---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G+   DGLPG+ G  G  G  GE+G  GP G +G SG
Sbjct: 780 GRDGEDGLPGRKGQRGPAGLKGEQGDVGPAGPQGPSG 816



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 92/166 (55%), Gaps = 15/166 (9%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  G  G  G  GA+G  G++GE G  G PG+ G  GP+G  G  G +G  G+ G+ G
Sbjct: 2035 PAGNDGIPGTDGADGARGTKGIQGEDGLPGVPGLTGTDGPRGPDGSTGAKGDTGEPGFDG 2094

Query: 171  PQGI------PGDEGKRGPK---GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---DG 218
             +G+       GD+G  GPK   G  G PG  G DG DG  G+PG  GIPG +G    DG
Sbjct: 2095 AEGVKGLTGVAGDKGVLGPKGYSGPKGDPGLDGTDGADGAVGDPGPSGIPGPSGTPGSDG 2154

Query: 219  IPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            + G  GL G DG+   PG++G  G  G TGP+G RG  G +G+ GT
Sbjct: 2155 VDGPKGLRGDDGVNGTPGSDGAPGPVGDTGPQGTRGDPGFSGLTGT 2200



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/157 (45%), Positives = 85/157 (54%), Gaps = 12/157 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            GL G  G KG +G KG  G KG+    G  GA G VG PGP GIPG  G     G  G  
Sbjct: 2100 GLTGVAGDKGVLGPKGYSGPKGDPGLDGTDGADGAVGDPGPSGIPGPSGT---PGSDGVD 2156

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP+G+ GD+G  G  G  G PG +G  G  G  G+PG  G+ G +G  G  G DG+P   
Sbjct: 2157 GPKGLRGDDGVNGTPGSDGAPGPVGDTGPQGTRGDPGFSGLTGTDGPRGPAGPDGIP--- 2213

Query: 230  GIPGTNGTNGEKGMTGPRGNR---GKSGINGVPGTPA 263
            G PGT+GT+G KG  G RG+    G  G +G  GTP 
Sbjct: 2214 GTPGTDGTDGAKGQRGERGDTGPVGAPGFDGTDGTPG 2250



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 84/164 (51%), Gaps = 18/164 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL GP G+ G+ G KG+ GV G  G  GAPG    PG QG  G +G+ G  G  G PG  
Sbjct: 1935 GLPGPSGESGDKGFKGQRGVDGLDGTDGAPGA---PGAQGESGLKGQPGDAGFRGAPGSD 1991

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+PG++G+   KG+ G  GR G DG  G PG+ G DG  G  G  G  G DG+PG DG  
Sbjct: 1992 GVPGEDGE---KGERGPQGRAGEDGLIGAPGDDGFDGTNGARGPAGPAGNDGIPGTDGAD 2048

Query: 233  GTNGTNGEK------------GMTGPRGNRGKSGINGVPGTPAI 264
            G  GT G +            G  GPRG  G +G  G  G P  
Sbjct: 2049 GARGTKGIQGEDGLPGVPGLTGTDGPRGPDGSTGAKGDTGEPGF 2092



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/190 (40%), Positives = 94/190 (49%), Gaps = 21/190 (11%)

Query: 92   SRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG-------- 143
            S +  V   G   +  E    G  GP G KG  G  G  G  G++G +G PG        
Sbjct: 1001 SVLDCVGYDGVDGAKGERGDAGTPGPRGPKGFAGNDGIDGAPGDKGFQGTPGTPGRDGED 1060

Query: 144  -VVGPP---GPQGIPGDEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLD 196
             +VGP    GP+G PGD G  G  G  G P   GP+G PG++G +G +GD G+ G  G+D
Sbjct: 1061 GLVGPAGDQGPRGAPGDTGNPGANGSDGVPGSDGPRGAPGEQGLKGLRGDPGFDGTDGID 1120

Query: 197  GRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            GR+G  G PG DG  G        G  G PG+DGL G  G  G +GT+G  G  G  G R
Sbjct: 1121 GRNGANGAPGPDGARGSQGDRGDRGASGTPGEDGLRGIKGFAGFDGTDGIDGRDGTPGPR 1180

Query: 251  GKSGINGVPG 260
            G  G  G PG
Sbjct: 1181 GDPGDVGAPG 1190



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 87/173 (50%), Gaps = 24/173 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +GP G+ GE G  G  G  G  G  GA G  GP G  GIPG +G  G +G  G  G  
Sbjct: 2001 GERGPQGRAGEDGLIGAPGDDGFDGTNGARGPAGPAGNDGIPGTDGADGARGTKGIQGED 2060

Query: 173  GIPG------DEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGI---------- 210
            G+PG       +G RGP      KGD G PG  G +G  GL G  G  G+          
Sbjct: 2061 GLPGVPGLTGTDGPRGPDGSTGAKGDTGEPGFDGAEGVKGLTGVAGDKGVLGPKGYSGPK 2120

Query: 211  --PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              PG +G DG  G  G PG  GIPG +GT G  G+ GP+G RG  G+NG PG+
Sbjct: 2121 GDPGLDGTDGADGAVGDPGPSGIPGPSGTPGSDGVDGPKGLRGDDGVNGTPGS 2173



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 106/232 (45%), Gaps = 23/232 (9%)

Query: 41  DKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQ 100
           D DKG+  D      P V+ VP       R+ ++  Q ++ +N     +           
Sbjct: 144 DGDKGERGDTGRQGDPGVDGVP------GRKGQRGPQGASGDNGTPGNDG--------TN 189

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G         P G  G  G  G  G  G  G +G RGE G PG VG PG  G  G +G R
Sbjct: 190 GRKGQRGAPGPDGTPGTDGAPGVDGVDGNPGPQGPRGEDGLPGAVGDPGTDGFDGTDGVR 249

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------ 214
           G +GD G+ G  G  G  G+ G  GD G PG  G DG +G  G  G  G+PG++      
Sbjct: 250 GDRGDKGFRGATGAQGARGEDGLNGDAGDPGFDGTDGVNGPRGPRGPVGLPGKSFLKSCA 309

Query: 215 GMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            M G  G+DGL    G DG  GT+G  G+ G+ G  G RG  G +G PGTP 
Sbjct: 310 SMKGNQGEDGLQGIAGTDGFDGTDGPRGDPGLPGEPGARGSRGPSGTPGTPG 361



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 87/167 (52%), Gaps = 12/167 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPKGDMGYP 169
            GL G  G  G  GA+GE G+KG+ G+    G  G PG  G+PG++   G+RGP+G  G  
Sbjct: 1956 GLDGTDGAPGAPGAQGESGLKGQPGDA---GFRGAPGSDGVPGEDGEKGERGPQGRAGED 2012

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G  G PGD+G  G  G  G  G  G DG       PG DG  G  G  GI G+DGLPG  
Sbjct: 2013 GLIGAPGDDGFDGTNGARGPAGPAGNDGI------PGTDGADGARGTKGIQGEDGLPGVP 2066

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G+ GT+G  G  G TG +G+ G+ G +G  G   +     +   L P
Sbjct: 2067 GLTGTDGPRGPDGSTGAKGDTGEPGFDGAEGVKGLTGVAGDKGVLGP 2113



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 85/178 (47%), Gaps = 9/178 (5%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L    G   +  +  P G+ GP G  G  G  G  G++G+ G  G PG  G PGP G   
Sbjct: 2125 LDGTDGADGAVGDPGPSGIPGPSGTPGSDGVDGPKGLRGDDGVNGTPGSDGAPGPVG--- 2181

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
                 GP+G  G PG  G+ G +G RGP G  G PG  G DG DG  G+ G  G  G  G
Sbjct: 2182 ---DTGPQGTRGDPGFSGLTGTDGPRGPAGPDGIPGTPGTDGTDGAKGQRGERGDTGPVG 2238

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS---GINGVPGTPAICAYKRE 270
              G  G DG PG+D   G NG  G+ G  GP+G +G+    G+ G  G P     K E
Sbjct: 2239 APGFDGTDGTPGRDASNGANGDTGDTGPAGPQGVKGRDGEVGLEGPRGRPGTDGAKGE 2296



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 101/207 (48%), Gaps = 33/207 (15%)

Query: 91   YSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGP 147
            Y  +  +  +G      +   PG++G  G+ G  G  G  GVKG +GE   +G  G  G 
Sbjct: 1751 YVSVNRMGDKGVKGVKGQTGAPGIKGEAGEPGLPGLDGTDGVKGIKGETGNRGDNGATGD 1810

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             G  GIPGD+G +G  G+ G  G  G  G +G+RG +GD G+    G DG DG+ G PG 
Sbjct: 1811 RGDSGIPGDKGIKGRTGEDGLRGEPGFDGTDGRRGMQGDKGF---RGADGADGIDGSPGP 1867

Query: 208  DGIPGRNGMDGIPGKDGL------------------------PGKDGIPGTNGTNGEKGM 243
             G PG +G DG PG+DGL                         G DG PGT+GT G+KG 
Sbjct: 1868 RGAPGDSGADGRPGEDGLNGTPGVDGGPGDPGDAGARGPKGFRGADGTPGTDGTPGDKGQ 1927

Query: 244  TGPRGNRGKSGINGVPGTPAICAYKRE 270
               RG+ G++G+ G  G      +K +
Sbjct: 1928 ---RGDAGETGLPGPSGESGDKGFKGQ 1951



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/156 (44%), Positives = 82/156 (52%), Gaps = 16/156 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP G  GE G KG   ++G+ G  G  G+ G  G  G PG +G RG +GD G  G 
Sbjct: 1090 PGSDGPRGAPGEQGLKG---LRGDPGFDGTDGIDGRNGANGAPGPDGARGSQGDRGDRGA 1146

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRNG----------MDG 218
             G PG++G RG KG  G+ G  G+DGRDG PG   +PG  G PG  G            G
Sbjct: 1147 SGTPGEDGLRGIKGFAGFDGTDGIDGRDGTPGPRGDPGDVGAPGPQGPAGRDDNTVYFKG 1206

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              G+DGLPG  G  G  G  G  G TGP+G RG  G
Sbjct: 1207 QQGEDGLPGDVGPAGPKGERGPAGNTGPQGPRGPDG 1242



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 87/193 (45%), Gaps = 24/193 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
            G  GP G  G  GAKG+ G  G  G +G  G+ G  G +G+ G +G  GPKGD       
Sbjct: 2070 GTDGPRGPDGSTGAKGDTGEPGFDGAEGVKGLTGVAGDKGVLGPKGYSGPKGDPGLDGTD 2129

Query: 166  -----------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLD 208
                        G PGP G PG +G  GPKG  G  G  G  G DG P      G  G  
Sbjct: 2130 GADGAVGDPGPSGIPGPSGTPGSDGVDGPKGLRGDDGVNGTPGSDGAPGPVGDTGPQGTR 2189

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G PG +G+ G  G  G  G DGIPGT GT+G  G  G RG RG +G  G PG        
Sbjct: 2190 GDPGFSGLTGTDGPRGPAGPDGIPGTPGTDGTDGAKGQRGERGDTGPVGAPGFDGTDGTP 2249

Query: 269  RESCSLLPNSETS 281
                S   N +T 
Sbjct: 2250 GRDASNGANGDTG 2262



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 86/172 (50%), Gaps = 16/172 (9%)

Query: 99  MQG-FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
           +QG FC  + +    G  G  G  G  GA+G  G  G  GE G  G  G  G QG+ GD 
Sbjct: 633 LQGIFCADSPDKGARGRTGDPGVPGTDGARGPQGPAGRAGEDGLNGTPGRDGEQGLKGDP 692

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRN 214
           G  G  G  G PGP+G     G RG +G+ G PG  GLDGR G     G PG DG PG +
Sbjct: 693 GFDGTDGVDGRPGPRGA---TGARGSRGETGSPGEDGLDGRKGQRGPSGTPGSDGTPGAD 749

Query: 215 GMDGIPGKDGL---------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G+ G  G+          G+DG  G  G +GE G+ G +G RG +G+ G
Sbjct: 750 GTPGVTGDKGVRGPSGPQGPAGRDGADGAPGRDGEDGLPGRKGQRGPAGLKG 801



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 79/156 (50%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            +GP G +G  G  G  G  G++G++G  G  G PGP G  GD+G +G +G  G  G  G 
Sbjct: 1904 RGPKGFRGADGTPGTDGTPGDKGQRGDAGETGLPGPSGESGDKGFKGQRGVDGLDGTDGA 1963

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
            PG  G +G  G  G PG  G  G  G  G PG DG  G  G  G  G+DGL G  G  G 
Sbjct: 1964 PGAPGAQGESGLKGQPGDAGFRGAPGSDGVPGEDGEKGERGPQGRAGEDGLIGAPGDDGF 2023

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            +GTNG +G  GP GN G  G +G  G       + E
Sbjct: 2024 DGTNGARGPAGPAGNDGIPGTDGADGARGTKGIQGE 2059



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 87/171 (50%), Gaps = 19/171 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL GP G +G  GA G+ G  G  G  G PG  GP   +G PG++G +G +GD G+ G  
Sbjct: 1061 GLVGPAGDQGPRGAPGDTGNPGANGSDGVPGSDGP---RGAPGEQGLKGLRGDPGFDGTD 1117

Query: 173  GI---------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            GI         PG +G RG +GD G  G  G  G DGL    G+ G  G +G DGI G+D
Sbjct: 1118 GIDGRNGANGAPGPDGARGSQGDRGDRGASGTPGEDGL---RGIKGFAGFDGTDGIDGRD 1174

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGN----RGKSGINGVPGTPAICAYKRE 270
            G PG  G PG  G  G +G  G   N    +G+ G +G+PG       K E
Sbjct: 1175 GTPGPRGDPGDVGAPGPQGPAGRDDNTVYFKGQQGEDGLPGDVGPAGPKGE 1225



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 81/170 (47%), Gaps = 18/170 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------- 164
            PG+ G  G  G  G +G  G+ GE G+ G PG  G PGP G  G  G  GP G       
Sbjct: 2450 PGVDGSNGSPGLKGQRGFTGLVGEPGDDGLPGSDGAPGPAGPKGLRGTAGPAGRQGESGL 2509

Query: 165  --DMGYPGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGLDGIPGRNGM 216
              D+G PG  G PG++G  G  G+ G PG        G  G DG PG  G DG PG  G+
Sbjct: 2510 DGDVGEPGLPGEPGEDGADGADGEDGTPGARGDKGFAGTPGTDGEPGADGADGAPGPRGI 2569

Query: 217  DGIPGK---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G    DG PG  G  GT+G  G +G  GP G  G  G+ G  G P 
Sbjct: 2570 KGRAGSNAPDGAPGDPGFTGTDGAQGPRGPDGPAGRDGLQGLKGGRGDPG 2619



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 81/151 (53%), Gaps = 14/151 (9%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QGP G  G  G  G  G+KG RG+ G  G++G PG  G+ G  G+ G KG  G+ G  
Sbjct: 2592 GAQGPRGPDGPAGRDGLQGLKGGRGDPGEAGLLGAPGDVGLKGARGRDGEKGVKGFRGHL 2651

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  GDEG+RGP G MG     G DGR   PG PGL G PG +G      +DG  G+ G  
Sbjct: 2652 GADGDEGERGPMGPMGD---TGTDGR---PGTPGLPGAPGDDG------RDGTKGRRGDK 2699

Query: 233  GTNGTN--GEKGMTGPRGNRGKSGINGVPGT 261
            G  G    G+KG  G  G+ G  G+ G+ G+
Sbjct: 2700 GQAGDAAVGDKGRAGAPGDDGIKGVAGLKGS 2730



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 78/150 (52%), Gaps = 6/150 (4%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G++G  G +G  G KGE G  G PG    PGP G PG++G+RG   D G PG  GIPG  
Sbjct: 1464 GRRGADGPRGPEGFKGEAGLDGRPGN---PGPDGTPGNKGRRG---DSGLPGRDGIPGPR 1517

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  G KG  G+ GR G+ G  G  G+PG+ G  G +G  G  G+ G  G  G PGT G N
Sbjct: 1518 GATGDKGYKGFRGRTGIKGAIGERGDPGIGGPNGDSGEKGYKGEKGPTGPRGTPGTLGVN 1577

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G  G+ G  G +   G      YK
Sbjct: 1578 GRPGFNGLDGSDGPRGRDADDGAQGDKGYK 1607



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 80/165 (48%), Gaps = 13/165 (7%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            GF  +     P G  GP G+ G  G KG  G  GE G  GAPG V      G+ G  G+ 
Sbjct: 2586 GFTGTDGAQGPRGPDGPAGRDGLQGLKGGRGDPGEAGLLGAPGDV------GLKGARGRD 2639

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G KG  G+ G  G  GDEG+RGP G MG     G DGR   PG PGL G PG +G DG  
Sbjct: 2640 GEKGVKGFRGHLGADGDEGERGPMGPMGD---TGTDGR---PGTPGLPGAPGDDGRDGTK 2693

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G+ G  G+ G     G  G  G  G  G +G +G+ G  G    C
Sbjct: 2694 GRRGDKGQAGDAAV-GDKGRAGAPGDDGIKGVAGLKGSEGAEGAC 2737



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 87/164 (53%), Gaps = 13/164 (7%)

Query: 106  TKEYCPPGLQGPIGQKGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQGIPGDEGK 159
            T++ C  G  G  G  G+ G  GE G+KG        G  G PG  G  GP+G  G +G+
Sbjct: 1422 TQQLCS-GYDGVDGTPGQDGTPGEPGLKGLPGDDGFDGTDGVPGRRGADGPRGPEGFKGE 1480

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G  G  G PGP G PG++G+RG   D G PGR G+ G  G  G+ G  G  GR G+ G 
Sbjct: 1481 AGLDGRPGNPGPDGTPGNKGRRG---DSGLPGRDGIPGPRGATGDKGYKGFRGRTGIKGA 1537

Query: 220  PGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G P   G +G  G  G  GEKG TGPRG  G  G+NG PG
Sbjct: 1538 IGERGDPGIGGPNGDSGEKGYKGEKGPTGPRGTPGTLGVNGRPG 1581



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 76/149 (51%), Gaps = 9/149 (6%)

Query: 143  GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            GV G PG  G PG+ G +G  GD G+ G  G+PG  G  GP+G  G+ G  GLDGR   P
Sbjct: 1431 GVDGTPGQDGTPGEPGLKGLPGDDGFDGTDGVPGRRGADGPRGPEGFKGEAGLDGR---P 1487

Query: 203  GEPGLDGIPG---RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGIN 256
            G PG DG PG   R G  G+PG+DG+PG  G  G  G  G +G TG +   G RG  GI 
Sbjct: 1488 GNPGPDGTPGNKGRRGDSGLPGRDGIPGPRGATGDKGYKGFRGRTGIKGAIGERGDPGIG 1547

Query: 257  GVPGTPAICAYKRESCSLLPNSETSQLLI 285
            G  G      YK E     P      L +
Sbjct: 1548 GPNGDSGEKGYKGEKGPTGPRGTPGTLGV 1576



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 80/171 (46%), Gaps = 9/171 (5%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L   +GF     E    GL G  G  G  G KG  G  G  G +G  G+ G  G  G+PG
Sbjct: 2461 LKGQRGFTGLVGEPGDDGLPGSDGAPGPAGPKGLRGTAGPAGRQGESGLDGDVGEPGLPG 2520

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            + G+ G     G  G  G PG  G +G  G  G  G  G DG DG PG  G+ G  G N 
Sbjct: 2521 EPGEDGAD---GADGEDGTPGARGDKGFAGTPGTDGEPGADGADGAPGPRGIKGRAGSNA 2577

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGE------KGMTGPRGNRGKSGINGVPG 260
             DG PG  G  G DG  G  G +G       +G+ G RG+ G++G+ G PG
Sbjct: 2578 PDGAPGDPGFTGTDGAQGPRGPDGPAGRDGLQGLKGGRGDPGEAGLLGAPG 2628



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 93/193 (48%), Gaps = 20/193 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV---------------KGERGEKGAPGVVGPPGPQGIPGD 156
            PG +G  G +G  G KGE G+               KG RG+ G PG  G PGP+G  GD
Sbjct: 1463 PGRRGADGPRGPEGFKGEAGLDGRPGNPGPDGTPGNKGRRGDSGLPGRDGIPGPRGATGD 1522

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            +G +G +G  G  G  G  GD G  GP GD    GY G  G  G  G PG  G++G PG 
Sbjct: 1523 KGYKGFRGRTGIKGAIGERGDPGIGGPNGDSGEKGYKGEKGPTGPRGTPGTLGVNGRPGF 1582

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEK--GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            NG+DG  G  G    DG  G  G  G +  G +G +G +G  G  G+ G   +   +  +
Sbjct: 1583 NGLDGSDGPRGRDADDGAQGDKGYKGSRTVGPSGDKGYKGTLGYKGMQGDKGMQGDRGSA 1642

Query: 272  CSLLPNSETSQLL 284
               +  +E ++LL
Sbjct: 1643 GDCVDRAEQTRLL 1655



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 92/192 (47%), Gaps = 11/192 (5%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEI---------GAKGEMGVKGERGEKGAPGVVGPPGPQ 151
           GF  +     P G +GP+G  G+          G +GE G++G  G  G  G  GP G  
Sbjct: 280 GFDGTDGVNGPRGPRGPVGLPGKSFLKSCASMKGNQGEDGLQGIAGTDGFDGTDGPRGDP 339

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG+ G RG +G  G PG  G  G  G RGP G  G  G  G DG  G  G+ G  G P
Sbjct: 340 GLPGEPGARGSRGPSGTPGTPGSKGQPGPRGPDGVNGADGADGADGPKGYKGQQGNSGTP 399

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G +G+DG  G+ G  G+ G+ G  G  G  G TG +GN G  G+ G  G    C Y    
Sbjct: 400 GEDGLDGRKGQRGRDGEGGLQGDRGAPGNPGPTGLKGNVGPMGLPGPAG--GECVYGASD 457

Query: 272 CSLLPNSETSQL 283
            + + +S  S L
Sbjct: 458 IAFILDSSGSIL 469



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 51/106 (48%), Gaps = 13/106 (12%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   +  E   PG+ GP G  GE G KGE G  G RG  G  GV G PG  G+ G +G R
Sbjct: 1533 GIKGAIGERGDPGIGGPNGDSGEKGYKGEKGPTGPRGTPGTLGVNGRPGFNGLDGSDGPR 1592

Query: 161  G------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            G       +GD GY G + +       GP GD GY G +G  G  G
Sbjct: 1593 GRDADDGAQGDKGYKGSRTV-------GPSGDKGYKGTLGYKGMQG 1631



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 1/107 (0%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V ++G      E    G +G +G  G+ G +G MG  G+ G  G PG  G PG  G  G 
Sbjct: 2630 VGLKGARGRDGEKGVKGFRGHLGADGDEGERGPMGPMGDTGTDGRPGTPGLPGAPGDDGR 2689

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            +G +G +GD G  G   + GD+G+ G  GD G  G  GL G +G  G
Sbjct: 2690 DGTKGRRGDKGQAGDAAV-GDKGRAGAPGDDGIKGVAGLKGSEGAEG 2735



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 61/126 (48%), Gaps = 3/126 (2%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +    GF  +      PGL G  G +   G++G  G  G  G KG PG  GP G  G  G
Sbjct: 323 IAGTDGFDGTDGPRGDPGLPGEPGAR---GSRGPSGTPGTPGSKGQPGPRGPDGVNGADG 379

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            +G  GPKG  G  G  G PG++G  G KG  G  G  GL G  G PG PG  G+ G  G
Sbjct: 380 ADGADGPKGYKGQQGNSGTPGEDGLDGRKGQRGRDGEGGLQGDRGAPGNPGPTGLKGNVG 439

Query: 216 MDGIPG 221
             G+PG
Sbjct: 440 PMGLPG 445


>gi|313219711|emb|CBY30631.1| unnamed protein product [Oikopleura dioica]
          Length = 518

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 88/156 (56%), Gaps = 29/156 (18%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG--DEGKRGPKGDMGYPGPQ 172
           +G  G  GE G KG+ G +G  GE+G PG +GP G QG PG  + G+RGP          
Sbjct: 174 KGDAGIPGEQGRKGDEGPRGPSGEQGNPGPIGPDGLQGPPGIGERGQRGP---------- 223

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---- 228
             PGDEG++GP G MG  G  GLDG+ GLPGE GL G  G  G+DG+ G+DGLPG+    
Sbjct: 224 --PGDEGQQGPPGPMGLRGPAGLDGKPGLPGEQGLKGAIGAEGLDGLDGQDGLPGERGPR 281

Query: 229 -----------DGIPGTNGTNGEKGMTGPRGNRGKS 253
                      +G+PG NG NG+ G  G +G  G S
Sbjct: 282 GDIGPPGKPGANGMPGANGINGKPGERGGQGPMGDS 317



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 95/205 (46%), Gaps = 69/205 (33%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG-----ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           G +GP G++G  G  G  G++G     ERG++G             PGDEG++GP G MG
Sbjct: 190 GPRGPSGEQGNPGPIGPDGLQGPPGIGERGQRGP------------PGDEGQQGPPGPMG 237

Query: 168 YPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------PGLDGIPG 212
             GP G+   PG  G++G KG +G  G  GLDG+DGLPGE            PG +G+PG
Sbjct: 238 LRGPAGLDGKPGLPGEQGLKGAIGAEGLDGLDGQDGLPGERGPRGDIGPPGKPGANGMPG 297

Query: 213 RNGMDGIPGK---------------------------------DGLPGKDGIPGTNGTNG 239
            NG++G PG+                                  G  GKDG+ G +G NG
Sbjct: 298 ANGINGKPGERGGQGPMGDSGGRGLPGLPGPVGPEGAVGEPGCKGEDGKDGLKGESGLNG 357

Query: 240 EK----GMTGPRGNRGKSGINGVPG 260
           +     G  GPRG  G  G  G PG
Sbjct: 358 QSSTRAGPIGPRGAPGAKGDQGAPG 382



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 72/168 (42%), Gaps = 54/168 (32%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG------APGVVGPPGPQGI---PGDEGKRGPK 163
           GL+G IG +G  G  G+ G+ GERG +G       PG  G PG  GI   PG+ G +GP 
Sbjct: 255 GLKGAIGAEGLDGLDGQDGLPGERGPRGDIGPPGKPGANGMPGANGINGKPGERGGQGPM 314

Query: 164 GD------------------MGYPGPQGIPGDEGKRG----------------------P 183
           GD                  +G PG +G  G +G +G                       
Sbjct: 315 GDSGGRGLPGLPGPVGPEGAVGEPGCKGEDGKDGLKGESGLNGQSSTRAGPIGPRGAPGA 374

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           KGD G PG IG+ G  G  GEPG    PG  G+  I G  G  G+ G+
Sbjct: 375 KGDQGAPG-IGIQGEVGPQGEPGF---PGEAGLS-IKGDVGATGEAGV 417


>gi|332243954|ref|XP_003271135.1| PREDICTED: collagen alpha-1(XIX) chain [Nomascus leucogenys]
          Length = 1142

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 92/193 (47%), Gaps = 41/193 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G +G KG+ G  GE   KGE+G++G PG++G  G +G PGD G  G  G  G  G 
Sbjct: 467 PGFPGSVGPKGQKGEPGESFTKGEKGDRGEPGIIGSQGVKGEPGDPGSPGLMGSPGLKGQ 526

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDG------------------------------L 201
           QG  G  G RGP GD+G PG  G+ G+ G                              L
Sbjct: 527 QGSAGSTGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGRSL 586

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGMTGPRGNR 250
           PGEPGLDG PG  G  G  G+ GLPG             GIPG  G+ G  G  G +G R
Sbjct: 587 PGEPGLDGSPGAPGPRGPKGERGLPGVHGSPGDIGPPGVGIPGRTGSQGPPGEPGIQGPR 646

Query: 251 GKSGINGVPGTPA 263
           G  G+ G PGTP 
Sbjct: 647 GLPGLPGTPGTPG 659



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 69/145 (47%), Gaps = 24/145 (16%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPG---------------DEGKRGPKGDMGYPGPQ 172
           G MG+ G  G  G  G  GP GP GI G               + G+RGP GD+G+PGP+
Sbjct: 860 GAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGPE 919

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                    GP G  G  G+ G+ G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 920 ---------GPSGKPGINGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGDRGSQGERGKP 970

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G  GP GN+G  G  G
Sbjct: 971 GLTGMKGAIGPMGPPGNKGSMGSPG 995



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/108 (44%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KGD G     G+PG  G  GPKG  G PG     G  G  GEP   GI G  G+ G PG 
Sbjct: 458 KGDKGE---TGLPGFPGSVGPKGQKGEPGESFTKGEKGDRGEP---GIIGSQGVKGEPGD 511

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G PG  G PG  G  G  G TGPRG  G  G+ G  G P     K E
Sbjct: 512 PGSPGLMGSPGLKGQQGSAGSTGPRGPPGDVGLPGEHGIPGKQGIKGE 559



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 61/131 (46%), Gaps = 36/131 (27%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
           PG  G+PG EG  G KGD G  GP GI G               + G+RGP GD+G+PG 
Sbjct: 859 PGAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGP 918

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGN 249
            G  G+ G                  I GKDG+PG  GI   PG  G  GE+G  G  G+
Sbjct: 919 EGPSGKPG------------------INGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGD 960

Query: 250 RGKSGINGVPG 260
           RG  G  G PG
Sbjct: 961 RGSQGERGKPG 971



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 35/69 (50%)

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE GL G PG  G  G  G+ G  G  G+PG  G  GE+G  G +G  G+ G  G  G P
Sbjct: 292 GEAGLPGAPGSPGQKGDKGELGENGLHGVPGLPGQKGEQGFEGSKGGTGEKGEQGEKGDP 351

Query: 263 AICAYKRES 271
            +  +  E+
Sbjct: 352 GLAGFNGEN 360



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G++G+ G  G+ G +GERG+ G  G+ G  GP G PG+      KG MG PG 
Sbjct: 943 PGDRGPKGERGDQGIPGDRGSQGERGKPGLTGMKGAIGPMGPPGN------KGSMGSPGH 996

Query: 172 Q 172
           Q
Sbjct: 997 Q 997



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 12/86 (13%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  GA G  G KG++GE G  G+ G PG   +PG       KG+ G+ G +G  G++
Sbjct: 292 GEAGLPGAPGSPGQKGDKGELGENGLHGVPG---LPGQ------KGEQGFEGSKGGTGEK 342

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGE 204
           G++G KGD   PG  G +G +GL G+
Sbjct: 343 GEQGEKGD---PGLAGFNGENGLKGD 365



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  G  G+ G KGE+G   E G  G PG+ G  G QG  G +G  G KG+ G  G  
Sbjct: 295 GLPGAPGSPGQKGDKGELG---ENGLHGVPGLPGQKGEQGFEGSKGGTGEKGEQGEKGDP 351

Query: 173 GIPGDEGKRGPKGDM 187
           G+ G  G+ G KGD+
Sbjct: 352 GLAGFNGENGLKGDL 366


>gi|410917858|ref|XP_003972403.1| PREDICTED: collagen alpha-1(XI) chain-like [Takifugu rubripes]
          Length = 1718

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 92/165 (55%), Gaps = 6/165 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP+G +G+ G  G  G+ G RG  G PG+ G  G  G+ G +G  GP G++G PG Q
Sbjct: 524 GSEGPLGPRGQAGEAGSRGLPGSRGRPGPPGLTGITGVDGVQGSKGNIGPPGEVGAPGQQ 583

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI- 231
           G PG  G  GP+G +G PG  G  G+ G  G PG DG PG  G +G PG+ GLPG  G+ 
Sbjct: 584 GNPGIVGFPGPQGLVGLPGEKGPQGKKGTQGLPGNDGPPGHPGREGTPGEKGLPGPQGVQ 643

Query: 232 -----PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
                PG  G  G  G+ G +G++G+ G +G PG       + +S
Sbjct: 644 GPVGYPGQRGVKGADGIRGFKGSKGEKGEDGFPGAKGEMGERGDS 688



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQ-- 151
              +G   S     PPGL G  G  G  G+KG +G  GE    G++G PG+VG PGPQ  
Sbjct: 538 AGSRGLPGSRGRPGPPGLTGITGVDGVQGSKGNIGPPGEVGAPGQQGNPGIVGFPGPQGL 597

Query: 152 -GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL--- 207
            G+PG++G +G KG  G PG  G PG  G+ G  G+ G PG  G+ G  G PG+ G+   
Sbjct: 598 VGLPGEKGPQGKKGTQGLPGNDGPPGHPGREGTPGEKGLPGPQGVQGPVGYPGQRGVKGA 657

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           DGI G  G  G  G+DG PG  G  G  G +GE G  G RG  G  G+ G
Sbjct: 658 DGIRGFKGSKGEKGEDGFPGAKGEMGERGDSGENGAPGTRGEDGPEGLKG 707



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 87/162 (53%), Gaps = 21/162 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G  G  G  G  GV+G +G  G PG VG PG QG P         G +G+PGP
Sbjct: 544 PGSRGRPGPPGLTGITGVDGVQGSKGNIGPPGEVGAPGQQGNP---------GIVGFPGP 594

Query: 172 Q---GIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           Q   G+PG++G +G KG  G PG     G  GR+G PGE GL G  G  G  G PG+ G+
Sbjct: 595 QGLVGLPGEKGPQGKKGTQGLPGNDGPPGHPGREGTPGEKGLPGPQGVQGPVGYPGQRGV 654

Query: 226 PGKDGIPGTNGTNGEK------GMTGPRGNRGKSGINGVPGT 261
            G DGI G  G+ GEK      G  G  G RG SG NG PGT
Sbjct: 655 KGADGIRGFKGSKGEKGEDGFPGAKGEMGERGDSGENGAPGT 696



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 85/172 (49%), Gaps = 18/172 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G  GE G +G  G  GE G KG+ G  G  G  G PG  G+ G +G  G PGP 
Sbjct: 797 GSDGPPGSPGERGPQGPQGRNGEPGPKGSNGPAGKDGLPGHPGQRGEAGFQGKTGPPGPT 856

Query: 173 GIPGDEGKRG---PKGDMGYPGRIGLDGRDGLP---------GEPGLDGIPGRN---GMD 217
           G+ G +GK G   P GD G+PG  G+ G  GLP         G+PGL G PG+N   GM 
Sbjct: 857 GVVGPQGKSGEPGPTGDRGHPGAPGVPGEQGLPGSAGKEGGKGDPGLPGTPGKNGPSGMK 916

Query: 218 GIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G  G  G P   G  G+ G  G  G  G+ GP G RG SG  G  G P    
Sbjct: 917 GFRGNRGAPGVMGPHGLKGALGPAGSPGVIGPTGERGPSGPAGAIGQPGRAG 968



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 86/186 (46%), Gaps = 6/186 (3%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           QG      E  P G  GP G+ G     G +GE G +G+ G  G  GVVGP G  G PG 
Sbjct: 811 QGPQGRNGEPGPKGSNGPAGKDGLPGHPGQRGEAGFQGKTGPPGPTGVVGPQGKSGEPGP 870

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G RG  G  G PG QG+PG  GK G KGD G PG  G +G  G+ G  G  G PG  G 
Sbjct: 871 TGDRGHPGAPGVPGEQGLPGSAGKEGGKGDPGLPGTPGKNGPSGMKGFRGNRGAPGVMGP 930

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G+    G  G  G PG  G  GE+G +GP G  G+ G  G  G       K E     P
Sbjct: 931 HGL---KGALGPAGSPGVIGPTGERGPSGPAGAIGQPGRAGSLGGAGPMGEKGEPGDKGP 987

Query: 277 NSETSQ 282
                Q
Sbjct: 988 IGPAGQ 993



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 83/157 (52%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  G +G +G  GE G +G++G +G PG  GPPG  G  G  G++G  G  G  GP
Sbjct: 586 PGIVGFPGPQGLVGLPGEKGPQGKKGTQGLPGNDGPPGHPGREGTPGEKGLPGPQGVQGP 645

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G PG  G +G  G  G+ G  G  G DG PG  G  G  G +G +G PG  G  G +G+
Sbjct: 646 VGYPGQRGVKGADGIRGFKGSKGEKGEDGFPGAKGEMGERGDSGENGAPGTRGEDGPEGL 705

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  GE G  G  G +GK G+ G+PG P     K
Sbjct: 706 KGQLGPKGEFGPAGHTGEKGKLGVPGLPGYPGRLGPK 742



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 77/145 (53%), Gaps = 24/145 (16%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ---------GIPGDEGKRGP- 183
           G+ GEKG  G  GPPG    PG+ G +GP+G  G PGP+         G+PG  G+RG  
Sbjct: 788 GKPGEKGVSGSDGPPG---SPGERGPQGPQGRNGEPGPKGSNGPAGKDGLPGHPGQRGEA 844

Query: 184 --KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---------GIP 232
             +G  G PG  G+ G  G  GEPG  G  G  G  G+PG+ GLPG           G+P
Sbjct: 845 GFQGKTGPPGPTGVVGPQGKSGEPGPTGDRGHPGAPGVPGEQGLPGSAGKEGGKGDPGLP 904

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           GT G NG  GM G RGNRG  G+ G
Sbjct: 905 GTPGKNGPSGMKGFRGNRGAPGVMG 929



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 92/188 (48%), Gaps = 33/188 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
            G  GP+G+KGE G KG +G  G+ GE+G  G +GP GP G+PGD+G +G +G+       
Sbjct: 971  GGAGPMGEKGEPGDKGPIGPAGQDGEQGPLGALGPTGPAGLPGDDGDKGEQGEPGQKGSK 1030

Query: 166  --------------------MGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLP 202
                                +G PG  G+ G  G++   GPKGD G+ G  G  G  GL 
Sbjct: 1031 GDKGEGGPPGPTGPQGPAGQLGVPGADGVVGPRGQQGMYGPKGDEGFRGFKGSPGPLGLQ 1090

Query: 203  GEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            G PGL G  G +G  G+   PG+ G  G  G  G  G NG  GM G  G  G+ G +G  
Sbjct: 1091 GMPGLSGEKGESGHVGLMGPPGQLGPTGAQGPIGGQGPNGRLGMIGQPGLVGEKGEDGEA 1150

Query: 260  GTPAICAY 267
            G P    +
Sbjct: 1151 GNPGPAGF 1158



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 96/204 (47%), Gaps = 36/204 (17%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            G      +  P G QGPIG +G    +G  G+ G+ GE+GE G  G  GP G  G+ G++
Sbjct: 1106 GLMGPPGQLGPTGAQGPIGGQGPNGRLGMIGQPGLVGEKGEDGEAGNPGPAGFSGMIGEK 1165

Query: 158  GKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G +G KGDMG    PGP G  G +G+ GPKG MG  G  G  G+ G  G  G++G+PG  
Sbjct: 1166 GDQGEKGDMGLAGAPGPPGARGLQGEDGPKGSMGPIGATGDFGQQGEAGPNGVEGLPGVK 1225

Query: 215  GMDGIPGKDGL------------------------------PGKDGIPGTNGTNGEKGMT 244
            G  G PGK GL                               G  G PG  G  G+ G  
Sbjct: 1226 GDSGDPGKSGLPGATGEPGPPGPPGRRGHLGKPGKGGKEGLKGAKGAPGLEGLMGKTGPV 1285

Query: 245  GPRGNRGKSGINGVPGTPAICAYK 268
            GP+G+ GKSG  G+ G P     +
Sbjct: 1286 GPQGHPGKSGPQGLRGIPGPAGEQ 1309



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 79/148 (53%), Gaps = 3/148 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G  G +G +G+ G  G  G++G PG  G PG QG+PG  GK G KGD G PG  
Sbjct: 848 GKTGPPGPTGVVGPQGKSGEPGPTGDRGHPGAPGVPGEQGLPGSAGKEGGKGDPGLPGTP 907

Query: 173 GIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G  G +G +G+ G PG +   GL G  G  G PG+ G  G  G  G  G  G PG+ 
Sbjct: 908 GKNGPSGMKGFRGNRGAPGVMGPHGLKGALGPAGSPGVIGPTGERGPSGPAGAIGQPGRA 967

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  GEKG  G +G  G +G +G
Sbjct: 968 GSLGGAGPMGEKGEPGDKGPIGPAGQDG 995



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 92/195 (47%), Gaps = 45/195 (23%)

Query: 119 GQKGEIGAKGEMG---VKGERGEKGAPGV---------------------------VGPP 148
           GQ G  G +GE+G    KG+RG  G PG+                            GP 
Sbjct: 470 GQHGADGGRGEVGDAGPKGDRGFDGLPGLPGYKGHKGDRGKPGPPGPPGETGERGSEGPL 529

Query: 149 GPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRD------ 199
           GP+G  G+ G RG  G  G PGP    GI G +G +G KG++G PG +G  G+       
Sbjct: 530 GPRGQAGEAGSRGLPGSRGRPGPPGLTGITGVDGVQGSKGNIGPPGEVGAPGQQGNPGIV 589

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGK---S 253
           G PG  GL G+PG  G  G  G  GLPG DG    PG  GT GEKG+ GP+G +G     
Sbjct: 590 GFPGPQGLVGLPGEKGPQGKKGTQGLPGNDGPPGHPGREGTPGEKGLPGPQGVQGPVGYP 649

Query: 254 GINGVPGTPAICAYK 268
           G  GV G   I  +K
Sbjct: 650 GQRGVKGADGIRGFK 664



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 115/257 (44%), Gaps = 47/257 (18%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIP 154
             M+GF  +      PG+ GP G KG +G  G  GV    GERG  G  G +G PG  G  
Sbjct: 914  GMKGFRGNRGA---PGVMGPHGLKGALGPAGSPGVIGPTGERGPSGPAGAIGQPGRAGSL 970

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G  G  G KG+ G  GP G  G +G++GP G +G  G  GL G DG  GE    G PG+ 
Sbjct: 971  GGAGPMGEKGEPGDKGPIGPAGQDGEQGPLGALGPTGPAGLPGDDGDKGE---QGEPGQK 1027

Query: 215  GMD---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G                       G+PG DG+ G  G  G  G  G++G  G +G+ G  
Sbjct: 1028 GSKGDKGEGGPPGPTGPQGPAGQLGVPGADGVVGPRGQQGMYGPKGDEGFRGFKGSPGPL 1087

Query: 254  GINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRC 313
            G+ G+PG   +   K ES  +        L+ PP  +G     +  PI   +G N RL  
Sbjct: 1088 GLQGMPG---LSGEKGESGHV-------GLMGPPGQLGP--TGAQGPI-GGQGPNGRLGM 1134

Query: 314  VATGHPKPSIIWKTSEN 330
            +     +P ++ +  E+
Sbjct: 1135 IG----QPGLVGEKGED 1147



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 89/174 (51%), Gaps = 24/174 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G +G+ G  G  G +G RG KG+PG   P G QG+PG  G++G  G +G  GP
Sbjct: 1054 PGADGVVGPRGQQGMYGPKGDEGFRGFKGSPG---PLGLQGMPGLSGEKGESGHVGLMGP 1110

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---PGRNGMDGIPGKDG---- 224
             G  G  G +GP G  G  GR+G+ G+ GL GE G DG    PG  G  G+ G+ G    
Sbjct: 1111 PGQLGPTGAQGPIGGQGPNGRLGMIGQPGLVGEKGEDGEAGNPGPAGFSGMIGEKGDQGE 1170

Query: 225  -----LPGKDGIPGTNGTNGEKG---------MTGPRGNRGKSGINGVPGTPAI 264
                 L G  G PG  G  GE G          TG  G +G++G NGV G P +
Sbjct: 1171 KGDMGLAGAPGPPGARGLQGEDGPKGSMGPIGATGDFGQQGEAGPNGVEGLPGV 1224



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 88/199 (44%), Gaps = 54/199 (27%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           G +G  G+KGE    GAKGEMG +G+ GE GAPG  G  GP+G+ G  G +G        
Sbjct: 662 GFKGSKGEKGEDGFPGAKGEMGERGDSGENGAPGTRGEDGPEGLKGQLGPKGEFGPAGHT 721

Query: 163 --KGDMGYPGPQGIPGDEG------------------------------KRGPKGD---- 186
             KG +G PG  G PG  G                              +RGP G     
Sbjct: 722 GEKGKLGVPGLPGYPGRLGPKGGDGFPGGLGPGGEKGKKGPGGQPGGVGQRGPNGARGGR 781

Query: 187 -----MGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                 G PG  G+ G DG PG PG     G  GRNG  G  G +G  GKDG+PG  G  
Sbjct: 782 GAKGPTGKPGEKGVSGSDGPPGSPGERGPQGPQGRNGEPGPKGSNGPAGKDGLPGHPGQR 841

Query: 239 GEKGMTGPRGNRGKSGING 257
           GE G  G  G  G +G+ G
Sbjct: 842 GEAGFQGKTGPPGPTGVVG 860



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 83/202 (41%), Gaps = 54/202 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK--------- 163
           G  GP G KG++G KGE G  G  GEKG  GV G      +PG  G+ GPK         
Sbjct: 698 GEDGPEGLKGQLGPKGEFGPAGHTGEKGKLGVPG------LPGYPGRLGPKGGDGFPGGL 751

Query: 164 ---------------------------------------GDMGYPGPQGIPGDEGKRGPK 184
                                                  G+ G  G  G PG  G+RGP+
Sbjct: 752 GPGGEKGKKGPGGQPGGVGQRGPNGARGGRGAKGPTGKPGEKGVSGSDGPPGSPGERGPQ 811

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G  G  G  G +G  G+ GL G PG+ G  G  GK G PG  G+ G  G +GE G T
Sbjct: 812 GPQGRNGEPGPKGSNGPAGKDGLPGHPGQRGEAGFQGKTGPPGPTGVVGPQGKSGEPGPT 871

Query: 245 GPRGNRGKSGINGVPGTPAICA 266
           G RG+ G  G+ G  G P    
Sbjct: 872 GDRGHPGAPGVPGEQGLPGSAG 893



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 82/169 (48%), Gaps = 9/169 (5%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------VKGERGEKGAPGVVGPPGPQGIP 154
            GF   T    P G+ GP G+ GE G  G+ G      V GE+G  G+ G  G  G  G+P
Sbjct: 845  GFQGKTGPPGPTGVVGPQGKSGEPGPTGDRGHPGAPGVPGEQGLPGSAGKEGGKGDPGLP 904

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLPGEPGLDGIP 211
            G  GK GP G  G+ G +G PG  G  G KG +   G PG IG  G  G  G  G  G P
Sbjct: 905  GTPGKNGPSGMKGFRGNRGAPGVMGPHGLKGALGPAGSPGVIGPTGERGPSGPAGAIGQP 964

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GR G  G  G  G  G+ G  G  G  G+ G  GP G  G +G  G+PG
Sbjct: 965  GRAGSLGGAGPMGEKGEPGDKGPIGPAGQDGEQGPLGALGPTGPAGLPG 1013



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 88/188 (46%), Gaps = 30/188 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPGVVGPP 148
            G  GP G  G+ G KGE G  G++G K                        GA GVVGP 
Sbjct: 1004 GPTGPAGLPGDDGDKGEQGEPGQKGSKGDKGEGGPPGPTGPQGPAGQLGVPGADGVVGPR 1063

Query: 149  GPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G QG+    GDEG RG KG  G  G QG+PG  G++G  G +G  G  G  G  G  G  
Sbjct: 1064 GQQGMYGPKGDEGFRGFKGSPGPLGLQGMPGLSGEKGESGHVGLMGPPGQLGPTGAQGPI 1123

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS---GINGVPGTP 262
            G  G  GR GM G PG  G  G+DG  G  G  G  GM G +G++G+    G+ G PG P
Sbjct: 1124 GGQGPNGRLGMIGQPGLVGEKGEDGEAGNPGPAGFSGMIGEKGDQGEKGDMGLAGAPGPP 1183

Query: 263  AICAYKRE 270
                 + E
Sbjct: 1184 GARGLQGE 1191



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 86/205 (41%), Gaps = 54/205 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---GYP 169
           GL GP G +G +G  G+ GVKG  G +G  G  G  G  G PG +G+ G +GD    G P
Sbjct: 635 GLPGPQGVQGPVGYPGQRGVKGADGIRGFKGSKGEKGEDGFPGAKGEMGERGDSGENGAP 694

Query: 170 GPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDG----------------- 209
           G +G  G EG +   GPKG+ G  G  G  G+ G+PG PG  G                 
Sbjct: 695 GTRGEDGPEGLKGQLGPKGEFGPAGHTGEKGKLGVPGLPGYPGRLGPKGGDGFPGGLGPG 754

Query: 210 -------------------------------IPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                            G+ G  G+ G DG PG  G  G  G  
Sbjct: 755 GEKGKKGPGGQPGGVGQRGPNGARGGRGAKGPTGKPGEKGVSGSDGPPGSPGERGPQGPQ 814

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  GP+G+ G +G +G+PG P 
Sbjct: 815 GRNGEPGPKGSNGPAGKDGLPGHPG 839



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 90/265 (33%), Gaps = 105/265 (39%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP----------------- 150
           E  PPG+ GPIG +G+    GE+G  G  G  GA GV GPPG                  
Sbjct: 342 ERGPPGVIGPIGPQGD---PGELGPPGRPGLNGADGVAGPPGNVILIPFQAGGDPKTGMG 398

Query: 151 -------------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK----------- 180
                              +G PG  G RG  G +G+PGP G+ G  G+           
Sbjct: 399 RSAQEAQAQAILQQTTLALKGPPGPLGLRGRPGPLGFPGPSGLKGSRGEMGQAGPPGLPG 458

Query: 181 -------------------------RGPKGDMGYPGRIGLDGRD---------------- 199
                                     GPKGD G+ G  GL G                  
Sbjct: 459 SPGQNGQIGKRGQHGADGGRGEVGDAGPKGDRGFDGLPGLPGYKGHKGDRGKPGPPGPPG 518

Query: 200 --------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                         G  GE G  G+PG  G  G PG  G+ G DG+ G+ G  G  G  G
Sbjct: 519 ETGERGSEGPLGPRGQAGEAGSRGLPGSRGRPGPPGLTGITGVDGVQGSKGNIGPPGEVG 578

Query: 246 PRGNRGKSGINGVPGTPAICAYKRE 270
             G +G  GI G PG   +     E
Sbjct: 579 APGQQGNPGIVGFPGPQGLVGLPGE 603



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 91/225 (40%), Gaps = 69/225 (30%)

Query: 103 CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGPPG---- 149
              T+   P G +GP G++G  G  G +G +G+ GE G P         GV GPPG    
Sbjct: 325 TQGTQIVGPYGPEGPEGERGPPGVIGPIGPQGDPGELGPPGRPGLNGADGVAGPPGNVIL 384

Query: 150 -PQGIPGD-------------------------EGKRGPKGDMGYPGPQGIPGDEGKRGP 183
            P    GD                         +G  GP G  G PGP G PG  G +G 
Sbjct: 385 IPFQAGGDPKTGMGRSAQEAQAQAILQQTTLALKGPPGPLGLRGRPGPLGFPGPSGLKGS 444

Query: 184 KGDMGYP---------------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           +G+MG                 G+ G  G DG  GE G  G  G  G DG+P   GLPG 
Sbjct: 445 RGEMGQAGPPGLPGSPGQNGQIGKRGQHGADGGRGEVGDAGPKGDRGFDGLP---GLPGY 501

Query: 229 DG------------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G             PG  G  G +G  GPRG  G++G  G+PG+
Sbjct: 502 KGHKGDRGKPGPPGPPGETGERGSEGPLGPRGQAGEAGSRGLPGS 546


>gi|301764379|ref|XP_002917620.1| PREDICTED: macrophage receptor MARCO-like [Ailuropoda melanoleuca]
          Length = 585

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 89/175 (50%), Gaps = 27/175 (15%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPKG 164
           PPGLQGP G KGE G +G  G  G++G+ G PG  G  G +      G  G+ G +G KG
Sbjct: 255 PPGLQGPPGIKGEAGLQGPNGAPGKQGDPGTPGQQGEKGSKGDGGLIGPKGEPGAKGDKG 314

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           D+G PG +   GD G +G  G MG PG  G  G  G PG PG+ GIPG  G  G PG  G
Sbjct: 315 DLGLPGSK---GDMGMKGDTGVMGPPGAQGSKGDSGKPGPPGVAGIPGMKGDQGQPGAKG 371

Query: 225 LPGKDGIPGTNGTNGEKGMTGP------------------RGNRGKSGINGVPGT 261
           LPG  G  G+ G  GE G TG                   +G+RG  G+ G  GT
Sbjct: 372 LPGSPGAAGSPGAKGEPGSTGSPGLAGPPGIPGSPGADGVKGSRGDPGLQGQKGT 426



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 93/202 (46%), Gaps = 39/202 (19%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAP------------GVVGPPGPQGIPGD 156
           PG QG  G KG+   IG KGE G KG++G+ G P            GV+GPPG QG  GD
Sbjct: 286 PGQQGEKGSKGDGGLIGPKGEPGAKGDKGDLGLPGSKGDMGMKGDTGVMGPPGAQGSKGD 345

Query: 157 EGKRGP---------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG------------- 194
            GK GP         KGD G PG +G+PG  G  G  G  G PG  G             
Sbjct: 346 SGKPGPPGVAGIPGMKGDQGQPGAKGLPGSPGAAGSPGAKGEPGSTGSPGLAGPPGIPGS 405

Query: 195 --LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
              DG  G  G+PGL G  G  G  G+PG  G+ G+ G  G  G +G  G+ G +G  G 
Sbjct: 406 PGADGVKGSRGDPGLQGQKGTKGESGVPGPAGMKGEKGTQGLVGLSGAPGLKGQKGEPGA 465

Query: 253 SGINGVPGTPAICAYKRESCSL 274
            G +G  G       K E  S+
Sbjct: 466 KGSSGAKGLQGEKGQKGERASM 487



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 91/194 (46%), Gaps = 36/194 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY- 168
           GLQGP G  G+ G  G  G +GE+G KG  G++GP   PG +G  GD G  G KGDMG  
Sbjct: 269 GLQGPNGAPGKQGDPGTPGQQGEKGSKGDGGLIGPKGEPGAKGDKGDLGLPGSKGDMGMK 328

Query: 169 --------PGPQGIPGDEGKRGP---------KGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                   PG QG  GD GK GP         KGD G PG  GL G  G  G PG  G P
Sbjct: 329 GDTGVMGPPGAQGSKGDSGKPGPPGVAGIPGMKGDQGQPGAKGLPGSPGAAGSPGAKGEP 388

Query: 212 GRNG---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G                DG+ G  G PG  G  GT G +G  G  G +G +G  G+ 
Sbjct: 389 GSTGSPGLAGPPGIPGSPGADGVKGSRGDPGLQGQKGTKGESGVPGPAGMKGEKGTQGLV 448

Query: 257 GVPGTPAICAYKRE 270
           G+ G P +   K E
Sbjct: 449 GLSGAPGLKGQKGE 462



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 82/158 (51%), Gaps = 6/158 (3%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G    T    PPG QG  G  G+ G  G  G+ G +G++G PG  G PG  G  G  G +
Sbjct: 326 GMKGDTGVMGPPGAQGSKGDSGKPGPPGVAGIPGMKGDQGQPGAKGLPGSPGAAGSPGAK 385

Query: 161 GPKGDMGYPG------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G  G PG        G PG +G +G +GD G  G+ G  G  G+PG  G+ G  G  
Sbjct: 386 GEPGSTGSPGLAGPPGIPGSPGADGVKGSRGDPGLQGQKGTKGESGVPGPAGMKGEKGTQ 445

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
           G+ G+ G  GL G+ G PG  G++G KG+ G +G +G+
Sbjct: 446 GLVGLSGAPGLKGQKGEPGAKGSSGAKGLQGEKGQKGE 483



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 45/90 (50%)

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G +G  G  G  GL G +G PG+ G  G PG+ G  G  G  GL G  G PG  G  G+ 
Sbjct: 257 GLQGPPGIKGEAGLQGPNGAPGKQGDPGTPGQQGEKGSKGDGGLIGPKGEPGAKGDKGDL 316

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G+ G +G+ G  G  GV G P     K +S
Sbjct: 317 GLPGSKGDMGMKGDTGVMGPPGAQGSKGDS 346


>gi|313222452|emb|CBY39368.1| unnamed protein product [Oikopleura dioica]
          Length = 319

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 92/180 (51%), Gaps = 26/180 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ-GIPGDEGKRGPKGDMGYP- 169
           PGLQGP G  G  G  G  G KGERGE G PG+    G    IPG  G++G  G+ G   
Sbjct: 20  PGLQGPPGADGRSG--GATGPKGERGEAGPPGIAAEIGELVSIPGPRGEKGASGEPGESI 77

Query: 170 -GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG--------------LPGEPGLDGIPGRN 214
            GP G  GD+G++GP G MG PGR G  G DG              + GEP +       
Sbjct: 78  VGPAGRNGDQGEQGPAGQMGMPGRPGRPGEDGQPGSPGPPGPAASVVAGEPVV------- 130

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G+ G PGKDGLPG+ G+ G +G  G  G  GPRG  G  G +G+PG    C     SCS 
Sbjct: 131 GLPGAPGKDGLPGRHGMDGKDGQQGPPGERGPRGYEGPPGQHGMPGPEGSCTTTECSCSA 190



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 34/59 (57%), Gaps = 11/59 (18%)

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           GL GE G DG+ GRN   GIPG  G PG DG  G        G TGP+G RG++G  G+
Sbjct: 3   GLKGEKGEDGLDGRN---GIPGLQGPPGADGRSG--------GATGPKGERGEAGPPGI 50


>gi|395533938|ref|XP_003769006.1| PREDICTED: collagen alpha-2(XI) chain [Sarcophilus harrisii]
          Length = 2305

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/157 (45%), Positives = 85/157 (54%), Gaps = 9/157 (5%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QGP+G  G  G KG  G++G +G KG  G  G PG     GD G +G +G++G PG
Sbjct: 707 PSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPG---FKGDMGVKGDRGEVGVPG 763

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------MDGIPGKDG 224
            +G  G EG +G  G  G PG IGL G  G  G PGL G PGR G        G PG +G
Sbjct: 764 SRGEDGPEGPKGRTGPNGDPGPIGLVGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGANG 823

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G+ G +G  GE+G TGPRG RG  G  G  G 
Sbjct: 824 EKGARGLSGKSGPRGERGPTGPRGQRGSRGATGKSGA 860



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 94/192 (48%), Gaps = 42/192 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  G+ G +G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 660 PGPQGAIGPHGDKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 719

Query: 172 QGIPG------------------------DEGKRGPKGDMGYPGRIGLDG------RDGL 201
           +G+ G                        D G +G +G++G PG  G DG      R G 
Sbjct: 720 RGVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGP 779

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGM------TGPRGN 249
            G+PG  G+ G  G  G+PG  G PG+       G PG  G NGEKG       +GPRG 
Sbjct: 780 NGDPGPIGLVGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGANGEKGARGLSGKSGPRGE 839

Query: 250 RGKSGINGVPGT 261
           RG +G  G  G+
Sbjct: 840 RGPTGPRGQRGS 851



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 96/204 (47%), Gaps = 54/204 (26%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRG 161
           PPG  G  G+ G  GA+G   E G+KG+RG  G PG+       G  G QG+PG  G+ G
Sbjct: 530 PPGKAGRRGRAGADGARGMPGEPGIKGDRGFDGLPGLPGEKGHRGESGSQGLPGPPGEDG 589

Query: 162 PKGDMGYPGPQGIPGDEGKRG------------------------PKGDM---------- 187
            +GD G  GP+G+PG+ G RG                        PKG++          
Sbjct: 590 ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPMGVRGIDGSHGPKGNLGPQGEPGPPG 649

Query: 188 --------GYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   G PG    IG  G  G  G+PGL G+PG +G  G PGK+G PG  G  G +G
Sbjct: 650 QQGTPGTQGLPGPQGAIGPHGDKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 709

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GPRG +G  GI G+ G
Sbjct: 710 PQGPLGYPGPRGVKGVDGIRGLKG 733



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 93/216 (43%), Gaps = 63/216 (29%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---------------------GP---- 147
           GL GP G+ GE G  GE+G +G  GE G  G++                     GP    
Sbjct: 580 GLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPMGVRGIDGSHGPKGNL 639

Query: 148 --------------PGPQGIPGDEGKRGPKGDM------------------GYPGPQGIP 175
                         PG QG+PG +G  GP GD                   G+PG +G P
Sbjct: 640 GPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGDKGPQGKPGLPGMPGSDGPPGHPGKEGPP 699

Query: 176 ---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
              G++G  GP+G +GYPG  G+ G DG+    GL G  G  G DG PG  G  G  G  
Sbjct: 700 GTKGNQGPSGPQGPLGYPGPRGVKGVDGI---RGLKGHKGEKGEDGFPGFKGDMGVKGDR 756

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G +G  GP G +G++G NG PG   +   K
Sbjct: 757 GEVGVPGSRGEDGPEGPKGRTGPNGDPGPIGLVGEK 792



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 87/210 (41%), Gaps = 77/210 (36%)

Query: 131 GVKGERGEKGAPGVV-------------------GPPGPQGIPG---DEGKRGPKGDMGY 168
           GV+G +GEKG P V+                   GPPG QG PG   D G+RGP G  G 
Sbjct: 377 GVRGLKGEKGEPAVLEPGMLVEGPPGPEGPTGLTGPPGIQGNPGPVGDPGERGPPGRAGL 436

Query: 169 PGPQGIPGDEGK-------------------------------------RGPKGDMGY-- 189
           PG  G PG  G                                      RGP G MGY  
Sbjct: 437 PGSDGTPGPPGTSLMLPFRFGSGGGDKGPVVAAQEIQAQAILQQARLALRGPPGPMGYTG 496

Query: 190 -PGRIGLDGRDGLPGEP------------GLDGIPGRNGMDGIPGKD---GLPGKDGIPG 233
            PG +G  G  GL GE             GL G PG+ G  G  G D   G+PG+ GI G
Sbjct: 497 HPGPLGHPGSPGLKGESGDLGPQGPRGPQGLSGPPGKAGRRGRAGADGARGMPGEPGIKG 556

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G +G  G+ G +G+RG+SG  G+PG P 
Sbjct: 557 DRGFDGLPGLPGEKGHRGESGSQGLPGPPG 586



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 73/140 (52%), Gaps = 21/140 (15%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G MG  G  G  G PG    PG +G  GD G +GP+G  G  GP   PG  G+R   
Sbjct: 487 GPPGPMGYTGHPGPLGHPGS---PGLKGESGDLGPQGPRGPQGLSGP---PGKAGRR--- 537

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTN 238
                 GR G DG  G+PGEPG+ G  G +G+ G+PG+ G  G+ G       PG +G  
Sbjct: 538 ------GRAGADGARGMPGEPGIKGDRGFDGLPGLPGEKGHRGESGSQGLPGPPGEDGER 591

Query: 239 GEKGMTGPRGNRGKSGINGV 258
           G+ G  GPRG  G+SG  G+
Sbjct: 592 GDDGEIGPRGLPGESGPRGL 611



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 90/214 (42%), Gaps = 54/214 (25%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P GL GP G+ G  G  G  G +G  GE G  G  G  G  G+PG++G RG  G  G PG
Sbjct: 524 PQGLSGPPGKAGRRGRAGADGARGMPGEPGIKGDRGFDGLPGLPGEKGHRGESGSQGLPG 583

Query: 171 P---QGIPGDEGKRGPKGDMGYPGRIGL------------------DGRDGLPGE----- 204
           P    G  GD+G+ GP+G  G  G  GL                  DG  G  G      
Sbjct: 584 PPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPMGVRGIDGSHGPKGNLGPQG 643

Query: 205 ----------PGLDGIP---------------GRNGMDGIPGKD---GLPGKDGIPGTNG 236
                     PG  G+P               G+ G+ G+PG D   G PGK+G PGT G
Sbjct: 644 EPGPPGQQGTPGTQGLPGPQGAIGPHGDKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKG 703

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G  G  GP G  G  G+ GV G   +  +K E
Sbjct: 704 NQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 737



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 88/204 (43%), Gaps = 57/204 (27%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  G  G +G  G  G+KGE G+ G     GP GPQG+ G  GK G +G  G  G
Sbjct: 488 PPGPMGYTGHPGPLGHPGSPGLKGESGDLGP---QGPRGPQGLSGPPGKAGRRGRAGADG 544

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------ 224
            +G+PG+ G    KGD G+ G  GL G  G  GE G  G+PG  G DG  G DG      
Sbjct: 545 ARGMPGEPGI---KGDRGFDGLPGLPGEKGHRGESGSQGLPGPPGEDGERGDDGEIGPRG 601

Query: 225 LPGKDG------------------IPGTNGTNGEK------------------------- 241
           LPG+ G                  + G +G++G K                         
Sbjct: 602 LPGESGPRGLLGPKGPPGIPGPMGVRGIDGSHGPKGNLGPQGEPGPPGQQGTPGTQGLPG 661

Query: 242 --GMTGPRGNRGKSGINGVPGTPA 263
             G  GP G++G  G  G+PG P 
Sbjct: 662 PQGAIGPHGDKGPQGKPGLPGMPG 685



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 60/124 (48%), Gaps = 18/124 (14%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----- 176
            G  G +GE G KGE+G  GAPG  GP GP G  G  G  G +G  G  G QG PG     
Sbjct: 1327 GPEGRQGEKGAKGEQGAVGAPGKTGPVGPAGAAGKPGPDGLRGIPGSVGQQGRPGATGLA 1386

Query: 177  -------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
                           G  G KG+ G+PG IGL G  G  GE G  G+PG  G  G  G+ 
Sbjct: 1387 GPPGPVGPPGLPGLRGDPGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGALGQKGET 1446

Query: 224  GLPG 227
            G+PG
Sbjct: 1447 GIPG 1450



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 93/246 (37%), Gaps = 99/246 (40%)

Query: 115  QGPIGQKGEIGAKG------EMGVKGERGEKGAPGVVGPP---------------GPQG- 152
            QGP+G+KGE G  G      E GVKG RGE+G  G  G P               GP+G 
Sbjct: 1206 QGPLGEKGEPGESGSPGIPGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDDGPKGN 1265

Query: 153  --------------------IPGDEGKRGPKGDMGYPG---------------------- 170
                                  G +G RG  G+ G PG                      
Sbjct: 1266 PGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEAGQPGSPGPTGENGPPGPPGKRGPAGT 1325

Query: 171  --PQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-- 223
              P+G  G++G +G +G +G PG+   +G  G  G PG  GL GIPG  G  G PG    
Sbjct: 1326 AGPEGRQGEKGAKGEQGAVGAPGKTGPVGPAGAAGKPGPDGLRGIPGSVGQQGRPGATGL 1385

Query: 224  ----------------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                                        GL G  G PG  G  G++G+ GP+G  G+ G 
Sbjct: 1386 AGPPGPVGPPGLPGLRGDPGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGALGQKGE 1445

Query: 256  NGVPGT 261
             G+PG 
Sbjct: 1446 TGIPGA 1451



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 79/168 (47%), Gaps = 48/168 (28%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------- 152
           GL+G  G+KGE    G KG+MGVKG+RGE G PG  G  GP+G                 
Sbjct: 730 GLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGPNGDPGPIGLV 789

Query: 153 -------------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                         P   G++GPKG +G+P   G PG  G++G +         GL G+ 
Sbjct: 790 GEKGKLGVPGLPGYP---GRQGPKGSLGFP---GFPGANGEKGAR---------GLSGKS 834

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  GE G  G  G+ G  G  GK G  G  G  G +G  GE+G+ GP+
Sbjct: 835 GPRGERGPTGPRGQRGSRGATGKSGAKGTSGGDGPHGPPGERGLPGPQ 882


>gi|338714697|ref|XP_001494879.3| PREDICTED: collagen alpha-1(VII) chain [Equus caballus]
          Length = 2933

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 91/174 (52%), Gaps = 19/174 (10%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-VGPPGPQGIPGDEGKRGPKGDM 166
            +  P GL GP G +GE G KG+ G  G +G+KG   V VGPPGPQG          KG M
Sbjct: 2482 QEGPRGLMGPPGSRGERGEKGDAGTTGLKGDKGDSAVAVGPPGPQGA---------KGVM 2532

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------PGRNGMDGIP 220
            G  GP+GI GD   +GP+G+ G PG  G  G  G  G  GL G+       G  G  GIP
Sbjct: 2533 GERGPRGIDGD---KGPRGESGNPGEKGAKGEPGDKGSAGLLGVRGLTGPKGEPGAAGIP 2589

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            G  G PGKDG PG  G  G+ G  GPRG +G+ G+ G  G       K E+  L
Sbjct: 2590 GDPGSPGKDGAPGVRGDKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPL 2643



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 90/170 (52%), Gaps = 27/170 (15%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------PPGP 150
            QG      E  P G+ G  G +GE G  GE G KGE G+KG+ G++G          PG 
Sbjct: 2526 QGAKGVMGERGPRGIDGDKGPRGESGNPGEKGAKGEPGDKGSAGLLGVRGLTGPKGEPGA 2585

Query: 151  QGIPGDEGK---------RGPKGDMGYPGPQGIPGD---------EGKRGPKGDMGYPGR 192
             GIPGD G          RG KGD+G+ GP+G+ G+         +G++G KG+ G  GR
Sbjct: 2586 AGIPGDPGSPGKDGAPGVRGDKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPLGR 2645

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             GL GR G  GEPG+ G+ G  G +G+ G  G  G DG PG  G  GEKG
Sbjct: 2646 PGLAGRKGDTGEPGVPGLSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKG 2695



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 92/178 (51%), Gaps = 27/178 (15%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---- 159
            +S     PPG QG  G  GE G +G  G KG RGE G PG  G    +G PGD+G     
Sbjct: 2515 DSAVAVGPPGPQGAKGVMGERGPRGIDGDKGPRGESGNPGEKGA---KGEPGDKGSAGLL 2571

Query: 160  --RGPKGDMGYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              RG  G  G PG  GIPGD G          RG KGD+G+ G  GL G  G+ G  GLD
Sbjct: 2572 GVRGLTGPKGEPGAAGIPGDPGSPGKDGAPGVRGDKGDVGFMGPRGLKGERGVKGACGLD 2631

Query: 209  GIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G  G+ GL G+       G+PG +G  G++G+ GP+G+R   G +G PG
Sbjct: 2632 GEKGDKGEAGPLGRPGLAGRKGDTGEPGVPGLSGAPGKEGLIGPKGDR---GFDGQPG 2686



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 80/176 (45%), Gaps = 38/176 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG  G      P G PG  G++G  G+ G PG  
Sbjct: 2611 GFMGPRGLKGERGVKGACGLDGEKGDKGEAG------PLGRPGLAGRKGDTGEPGVPGLS 2664

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIP------------------ 211
            G PG EG  GPKGD G+ G+ G  G  G  GE   P   G P                  
Sbjct: 2665 GAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERVTPRNGGFPGPRSNDGSSGPPGPPGGV 2724

Query: 212  ---------GRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                     G+ G  G PG+   G PG  G PG  G  G  G  GPRG +G++ + 
Sbjct: 2725 GPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALT 2780



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/190 (37%), Positives = 85/190 (44%), Gaps = 46/190 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++GAP         G VGP   PGP G PG    
Sbjct: 2238 PGLPGQVGETGKPGAPGRDGASGKDGDRGAPGVPGSPGLPGPVGPKGEPGPMGTPGQAVV 2297

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G KG+ G PG  G+ GD  G+ G KGD G PG  G  G  G  GEPG  G  G+ G 
Sbjct: 2298 GPPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGA 2355

Query: 217  DGIPGKDGLPGKD-----------------------------GIPGTNGTNGEKGMTGPR 247
             G+ G  G PG                               G PG  G  GE G  GP 
Sbjct: 2356 PGLKGNKGDPGVGVQGPSGPVGPPGLKGDLGPPGPPGAPGIVGFPGQTGPRGEMGQPGPS 2415

Query: 248  GNRGKSGING 257
            G RG +G+ G
Sbjct: 2416 GERGLAGLPG 2425



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 82/160 (51%), Gaps = 17/160 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QGP+G  GE G KG+        E GAPG+   PG  G PG+ G +GP G++G  G 
Sbjct: 1429 PGPQGPVGPSGEKGEKGDC-------EDGAPGL---PGQPGTPGERGLQGPPGNVGPKGD 1478

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGKDGL 225
            +G+ G  G+ G KG+ G PG +G  G  G+ G        G  G  GR G  G PG  G+
Sbjct: 1479 RGLTGSVGETGEKGERGSPGPVGPQGLPGVAGRPGAEGPEGPPGPAGRRGEKGEPGLPGV 1538

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            P   G P   G  GEKG  GP G RG  G+ G  G P + 
Sbjct: 1539 PAVVG-PAGAGPKGEKGDVGPTGPRGAPGVKGERGPPGLV 1577



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 95/247 (38%), Gaps = 88/247 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PGL GP G  GE G  GE G +GE+GE+G                           PG+ 
Sbjct: 2039 PGLPGPAGSVGEAGRPGERGERGEKGERGEQGRDGPPGIPGPPGPPGPKVAMDRPGPGLS 2098

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG +G+RGPKGD G PG +G  G+ G+RGP G  G  G  G+ G +
Sbjct: 2099 GEQGPPGLKGAKGEPGGDGERGPKGDRGVPGIKGDRGEPGQRGPDGSPGLLGERGVAGPE 2158

Query: 200  GLPGEPG------------------------LDGIPGRNGMDGIPGKD------------ 223
            G PG  G                          G  G +G+ G PG+             
Sbjct: 2159 GKPGLQGPRGTPGPEGGRGDPGPPGAPGLAGPSGPQGPSGLKGEPGETGPPGRGLPGPTG 2218

Query: 224  --------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                                GLPG+ G  G  G  G  G +G  G+RG  G+ G PG P 
Sbjct: 2219 AVGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGASGKDGDRGAPGVPGSPGLPG 2278

Query: 264  ICAYKRE 270
                K E
Sbjct: 2279 PVGPKGE 2285



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 104/276 (37%), Gaps = 118/276 (42%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQK------------------GEIGAKGEMGV--------- 132
            +G    T    PPG  GP+G+K                  GE+G KG+ G          
Sbjct: 1591 RGPIGLTGRAGPPGDSGPLGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGK 1650

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP--------------------- 171
             GERG +GAPG  GP G +G   D+G  G  G  G PGP                     
Sbjct: 1651 AGERGLRGAPGARGPVGEKG---DQGDPGEDGRNGSPGPSGSKGDRGEPGPPGPPGQLVD 1707

Query: 172  -------QGIPGDEGK------------------------------------RGPKGDMG 188
                   +G PGD G+                                    RGP G+ G
Sbjct: 1708 TGLGAREKGEPGDRGQEGPRGPKGDPGPPGASGERGIAGLRGPPGPQGDPGIRGPAGEKG 1767

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG------------------ 227
              G  GLDGR GL G+PG  G PG +G  G    PG+DGLPG                  
Sbjct: 1768 DRGPPGLDGRSGLDGKPGTSGPPGLHGATGKAGDPGRDGLPGLRGEQGPPGPPGPPGALG 1827

Query: 228  ---KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               +DG PG NG NGE+G  G  G +G+ G +G PG
Sbjct: 1828 KPGEDGKPGLNGKNGERGDPGEDGRKGEKGDSGTPG 1863



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 88/199 (44%), Gaps = 63/199 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-------------------- 152
            GL GP G+KGE G  GE G  GE G+KGAPG+ G  G  G                    
Sbjct: 2327 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGLKGNKGDPGVGVQGPSGPVGPPGLKGDLG 2386

Query: 153  ---------IPGDEGKRGPKGDMGYPGPQ------GIPGDE------------------G 179
                     I G  G+ GP+G+MG PGP       G+PG E                  G
Sbjct: 2387 PPGPPGAPGIVGFPGQTGPRGEMGQPGPSGERGLAGLPGREGAPGPLGPPGPPGSVGAPG 2446

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
              G KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG+ G  G
Sbjct: 2447 ASGLKGDKGDPGV-------GLPGARGERGEPGVRGEDGHPGQEGPRGLMGPPGSRGERG 2499

Query: 240  EK---GMTGPRGNRGKSGI 255
            EK   G TG +G++G S +
Sbjct: 2500 EKGDAGTTGLKGDKGDSAV 2518



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 87/196 (44%), Gaps = 41/196 (20%)

Query: 106  TKEYCPPGLQGPIGQK---GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            + E  PPGL+G  G+    GE G KG+ GV G +G++G PG  GP G  G+ G+ G  GP
Sbjct: 2098 SGEQGPPGLKGAKGEPGGDGERGPKGDRGVPGIKGDRGEPGQRGPDGSPGLLGERGVAGP 2157

Query: 163  KGDMGYPGPQGI------------------PGDEGKRGPKGDMGYPGRIGLDGRDGLP-- 202
            +G  G  GP+G                    G  G +GP G  G PG  G  GR      
Sbjct: 2158 EGKPGLQGPRGTPGPEGGRGDPGPPGAPGLAGPSGPQGPSGLKGEPGETGPPGRGLPGPT 2217

Query: 203  ------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                              G PGL G  G  G  G PG+DG  GKDG  G  G  G  G+ 
Sbjct: 2218 GAVGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGASGKDGDRGAPGVPGSPGLP 2277

Query: 245  GPRGNRGKSGINGVPG 260
            GP G +G+ G  G PG
Sbjct: 2278 GPVGPKGEPGPMGTPG 2293



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 100/244 (40%), Gaps = 83/244 (34%)

Query: 112  PGLQGPIGQKGEIGAKGE-----MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PGL GP+G KGE G  G      +G  G +GEKGAPG     +VG PG +G  G  G RG
Sbjct: 2274 PGLPGPVGPKGEPGPMGTPGQAVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRG 2333

Query: 162  PKGDMGYPGPQGIPGDEGKRGP------KGD----------------------------- 186
             KG+ G  G  G PG++G++G       KGD                             
Sbjct: 2334 EKGEAGRAGEPGDPGEDGQKGAPGLKGNKGDPGVGVQGPSGPVGPPGLKGDLGPPGPPGA 2393

Query: 187  ---MGYPGRIGLDGRDGLP---GEPGLDGIPGRN-------------------------- 214
               +G+PG+ G  G  G P   GE GL G+PGR                           
Sbjct: 2394 PGIVGFPGQTGPRGEMGQPGPSGERGLAGLPGREGAPGPLGPPGPPGSVGAPGASGLKGD 2453

Query: 215  ------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                  G+ G  G+ G PG  G  G  G  G +G+ GP G+RG+ G  G  GT  +   K
Sbjct: 2454 KGDPGVGLPGARGERGEPGVRGEDGHPGQEGPRGLMGPPGSRGERGEKGDAGTTGLKGDK 2513

Query: 269  RESC 272
             +S 
Sbjct: 2514 GDSA 2517



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 73/150 (48%), Gaps = 25/150 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------ 158
            PPG  GP G +G  G+ GE G KGERG        GP GPQG+PG  G            
Sbjct: 1469 PPGNVGPKGDRGLTGSVGETGEKGERGSP------GPVGPQGLPGVAGRPGAEGPEGPPG 1522

Query: 159  ---KRGPKGDMGYPGPQGI--PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL--DGIP 211
               +RG KG+ G PG   +  P   G +G KGD+G  G  G  G  G  G PGL   G P
Sbjct: 1523 PAGRRGEKGEPGLPGVPAVVGPAGAGPKGEKGDVGPTGPRGAPGVKGERGPPGLVFPGDP 1582

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G  G  G  G  GL G+ G PG +G  GEK
Sbjct: 1583 GPKGDPGDRGPIGLTGRAGPPGDSGPLGEK 1612



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 79/183 (43%), Gaps = 46/183 (25%)

Query: 137  GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGDEGK---------- 180
            G KG+PG    PGP+G PG+ G RGPKG+ G PG        G+PG +G           
Sbjct: 1320 GPKGSPGW---PGPRGEPGERGPRGPKGEPGEPGQVRGGDGPGLPGQKGDPGPPGTPGSR 1376

Query: 181  -------------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                               +G KGD G  G  G       PGEPGL G+PG  G  G  G
Sbjct: 1377 GPLGDPGPRGPPGLPGTAVKGDKGDRGERGPPGPGDGSTAPGEPGLPGLPGSPGPQGPVG 1436

Query: 222  KDGLPGKD--------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
              G  G+         G+PG  GT GE+G+ GP GN G  G  G+ G+      K E  S
Sbjct: 1437 PSGEKGEKGDCEDGAPGLPGQPGTPGERGLQGPPGNVGPKGDRGLTGSVGETGEKGERGS 1496

Query: 274  LLP 276
              P
Sbjct: 1497 PGP 1499



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 89/260 (34%), Gaps = 99/260 (38%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE------------------------ 135
            QGF        P G +G  G KGE G  GE G++GE                        
Sbjct: 1897 QGFPGVPGSVGPKGDRGETGSKGEQGLPGERGLRGEPGSMANVERLLENIGIKTSVLREI 1956

Query: 136  ------------------RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----------- 166
                              RG KG PG  GPPG +G  G  G RGPKGD            
Sbjct: 1957 VETWDESSSGFRPVPERHRGPKGDPGERGPPGKEGPIGFSGDRGPKGDRGDPGPQGPPGL 2016

Query: 167  -----------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---- 199
                                   G PGP G  G+ G+ G +G+ G  G  G  GRD    
Sbjct: 2017 ALGERGPPGPPGLAGEPGKPGIPGLPGPAGSVGEAGRPGERGERGEKGERGEQGRDGPPG 2076

Query: 200  -------------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                               GL GE G  G+ G  G  G  G+ G  G  G+PG  G  GE
Sbjct: 2077 IPGPPGPPGPKVAMDRPGPGLSGEQGPPGLKGAKGEPGGDGERGPKGDRGVPGIKGDRGE 2136

Query: 241  KGMTGPRGNRGKSGINGVPG 260
             G  GP G+ G  G  GV G
Sbjct: 2137 PGQRGPDGSPGLLGERGVAG 2156



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 89/208 (42%), Gaps = 63/208 (30%)

Query: 112  PGLQGPIGQKGEI------------------GAKGEMGVKGERGE--------------- 138
            PGLQGP G  G                    G +G  G+KGE GE               
Sbjct: 2161 PGLQGPRGTPGPEGGRGDPGPPGAPGLAGPSGPQGPSGLKGEPGETGPPGRGLPGPTGAV 2220

Query: 139  --------------KGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
                          +GAPG+   VG  G  G PG +G  G  GD G PG  G PG  G  
Sbjct: 2221 GLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGASGKDGDRGAPGVPGSPGLPGPV 2280

Query: 182  GPKGD---MGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGK 228
            GPKG+   MG PG+  +G  G  G  G PG     L G PG  G  G+P   G+ G  G+
Sbjct: 2281 GPKGEPGPMGTPGQAVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGR 2340

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G PG  G +G+KG  G +GN+G  G+ 
Sbjct: 2341 AGEPGDPGEDGQKGAPGLKGNKGDPGVG 2368



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 78/160 (48%), Gaps = 26/160 (16%)

Query: 121  KGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM-----GYP 169
            KG+ G +GE G  G        GE G PG+ G PGPQG  G  G++G KGD      G P
Sbjct: 1396 KGDKGDRGERGPPGPGDGSTAPGEPGLPGLPGSPGPQGPVGPSGEKGEKGDCEDGAPGLP 1455

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G  G PG+ G +GP G++G  G  GL G  G  GE G  G PG  G              
Sbjct: 1456 GQPGTPGERGLQGPPGNVGPKGDRGLTGSVGETGEKGERGSPGPVG------------PQ 1503

Query: 230  GIPGTNG---TNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G+PG  G     G +G  GP G RG+ G  G+PG PA+  
Sbjct: 1504 GLPGVAGRPGAEGPEGPPGPAGRRGEKGEPGLPGVPAVVG 1543



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 76/153 (49%), Gaps = 29/153 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMGYP 169
            P   GP G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD   RGP G  G  
Sbjct: 1544 PAGAGPKGEKGDVGPTGPRGAPGVKGERGPPGLVFPGDPGPKGDPGD---RGPIGLTGRA 1600

Query: 170  GPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGL---------PGEPGLD 208
            GP   PGD G  G KGD G P            G +G  G +G           GE GL 
Sbjct: 1601 GP---PGDSGPLGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLR 1657

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G PG  G  G  G  G PG+DG  G+ G +G K
Sbjct: 1658 GAPGARGPVGEKGDQGDPGEDGRNGSPGPSGSK 1690



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 69/163 (42%), Gaps = 46/163 (28%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
               K  C  GL G  G KGE G  G  G+ G +G+ G PGV   PG  G PG EG  GPK
Sbjct: 2622 RGVKGAC--GLDGEKGDKGEAGPLGRPGLAGRKGDTGEPGV---PGLSGAPGKEGLIGPK 2676

Query: 164  GDMGY---PGPQGIPGDEGKR------------------------------------GPK 184
            GD G+   PGP+G  G++G+R                                    G K
Sbjct: 2677 GDRGFDGQPGPKGDQGEKGERVTPRNGGFPGPRSNDGSSGPPGPPGGVGPKGPEGLQGQK 2736

Query: 185  GDMGYPGR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G+ G PG   +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 2737 GERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAAL 2779



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 80/188 (42%), Gaps = 44/188 (23%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ- 172
            ++GP G+KG+   +G  G+ G  G  G PG  GPPG   + G  GK G  G  G PG + 
Sbjct: 1759 IRGPAGEKGD---RGPPGLDGRSGLDGKPGTSGPPG---LHGATGKAGDPGRDGLPGLRG 1812

Query: 173  --------------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                                G PG  GK G +GD G  GR G  G  G PG  G DG  G
Sbjct: 1813 EQGPPGPPGPPGALGKPGEDGKPGLNGKNGERGDPGEDGRKGEKGDSGTPGRHGDDGPKG 1872

Query: 213  RNGMDGI--------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
              G  G               P   G PG   +PG+ G  G++G TG +G +G  G  G+
Sbjct: 1873 ERGAPGSPGPQGPPGLPGQVGPSGQGFPG---VPGSVGPKGDRGETGSKGEQGLPGERGL 1929

Query: 259  PGTPAICA 266
             G P   A
Sbjct: 1930 RGEPGSMA 1937



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 88/241 (36%), Gaps = 94/241 (39%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------------------- 146
            PG  GP G +GE G+KGE G+ GERG +G PG +                          
Sbjct: 1903 PGSVGPKGDRGETGSKGEQGLPGERGLRGEPGSMANVERLLENIGIKTSVLREIVETWDE 1962

Query: 147  -PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------RGPKGDM------------ 187
               G + +P  E  RGPKGD   PG +G PG EG       RGPKGD             
Sbjct: 1963 SSSGFRPVP--ERHRGPKGD---PGERGPPGKEGPIGFSGDRGPKGDRGDPGPQGPPGLA 2017

Query: 188  -------------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD----- 223
                               G PG  G  G  G  G PG  G  G  G  G  G+D     
Sbjct: 2018 LGERGPPGPPGLAGEPGKPGIPGLPGPAGSVGEAGRPGERGERGEKGERGEQGRDGPPGI 2077

Query: 224  ------------------GLPGKDGIPGTNGTNGEKG---MTGPRGNRGKSGINGVPGTP 262
                              GL G+ G PG  G  GE G     GP+G+RG  GI G  G P
Sbjct: 2078 PGPPGPPGPKVAMDRPGPGLSGEQGPPGLKGAKGEPGGDGERGPKGDRGVPGIKGDRGEP 2137

Query: 263  A 263
             
Sbjct: 2138 G 2138



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 70/176 (39%), Gaps = 56/176 (31%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGY---------------- 168
            G+ G+ G+ GE+G PG  G  G +   G PG  G  GPKG+ G                 
Sbjct: 1833 GKPGLNGKNGERGDPGEDGRKGEKGDSGTPGRHGDDGPKGERGAPGSPGPQGPPGLPGQV 1892

Query: 169  -PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG--------------- 212
             P  QG PG  G  GPKGD    G  G  G  GLPGE GL G PG               
Sbjct: 1893 GPSGQGFPGVPGSVGPKGDR---GETGSKGEQGLPGERGLRGEPGSMANVERLLENIGIK 1949

Query: 213  --------------RNGMDGIP----GKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                           +G   +P    G  G PG+ G PG  G  G  G  GP+G+R
Sbjct: 1950 TSVLREIVETWDESSSGFRPVPERHRGPKGDPGERGPPGKEGPIGFSGDRGPKGDR 2005


>gi|224073359|ref|XP_002193897.1| PREDICTED: collagen alpha-1(XXVII) chain B-like [Taeniopygia guttata]
          Length = 1743

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 105/207 (50%), Gaps = 49/207 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG------------------ERGEKGAPGVV----GPPGP 150
            G  GP+G  G +GA+G+ G+KG                  E+G++G  G V    GPPG 
Sbjct: 1171 GTLGPMGAPGRMGAQGDPGLKGYQGHAGPPGPIGPPGPKGEKGQQGDDGKVEGPQGPPGD 1230

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGI------------------PGDEGKRGPKGDMGYPGR 192
            +G  GD G RG  GD GYPG +G+                  PG  G +G KGD+G  G+
Sbjct: 1231 RGPVGDRGDRGEPGDTGYPGQEGLDGERGKPGQQGLPGDPGSPGKPGAKGSKGDVGQKGK 1290

Query: 193  IGLDGRDGLPGEPGLDGIPG------RNGMDGIPGKDGLPGKDGIPGT---NGTNGEKGM 243
             G  G  G  G PG+ G+PG      R G +G PG DG+PGKDG+PG     G +G++G+
Sbjct: 1291 QGAQGSAGSRGSPGILGLPGPRGVVGRQGQEGAPGVDGVPGKDGVPGMLGEQGDDGDEGV 1350

Query: 244  TGPRGNRGKSGINGVPGTPAICAYKRE 270
            TG  G RG  G+ G+PG      +K E
Sbjct: 1351 TGMPGKRGNPGVPGLPGAQGPPGFKGE 1377



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 95/186 (51%), Gaps = 1/186 (0%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G KG++G KG+ G +G  G +G+PG++G PGP+G+ G +G+ G  G  G PG 
Sbjct: 1273 PGKPGAKGSKGDVGQKGKQGAQGSAGSRGSPGILGLPGPRGVVGRQGQEGAPGVDGVPGK 1332

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+PG  G++G  GD G  G  G  G  G+PG PG  G PG  G  G+PG+ G  GK G 
Sbjct: 1333 DGVPGMLGEQGDDGDEGVTGMPGKRGNPGVPGLPGAQGPPGFKGERGLPGQTGQTGKRGS 1392

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVG 291
            PG  G  G  G  G +G  G  G  G PG   +   K     L           PP ++G
Sbjct: 1393 PGGTGLPGSPGEPGAKGQPGDFGEAGFPGIAGLFGPKGPPGDLG-FKGIQGPRGPPGLMG 1451

Query: 292  SEHIFS 297
             E I  
Sbjct: 1452 KEGIIG 1457



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 96/187 (51%), Gaps = 30/187 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKG 164
            PPG +GP+G +G+   +GE G  G  G++G  G  G PG QG+PGD G       +G KG
Sbjct: 1227 PPGDRGPVGDRGD---RGEPGDTGYPGQEGLDGERGKPGQQGLPGDPGSPGKPGAKGSKG 1283

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI----- 219
            D+G  G QG  G  G RG  G +G PG  G+ GR G  G PG+DG+PG++G+ G+     
Sbjct: 1284 DVGQKGKQGAQGSAGSRGSPGILGLPGPRGVVGRQGQEGAPGVDGVPGKDGVPGMLGEQG 1343

Query: 220  ----------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                            PG  GLPG  G PG  G  G  G TG  G RG  G  G+PG+P 
Sbjct: 1344 DDGDEGVTGMPGKRGNPGVPGLPGAQGPPGFKGERGLPGQTGQTGKRGSPGGTGLPGSPG 1403

Query: 264  ICAYKRE 270
                K +
Sbjct: 1404 EPGAKGQ 1410



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/152 (44%), Positives = 88/152 (57%), Gaps = 9/152 (5%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  G+ G+ G  GE G KG PG +G PG QG+ G  G+ G +GD G  GP GI GD
Sbjct: 1029 MGHKGPPGSMGQPGPAGEPGMKGDPGQLGIPGEQGLVGQRGESGLEGDTGQLGPDGIKGD 1088

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            +G++GP+G+ G  G  GL G++G PG PG+ G+ G  G  G  G+ G PG+ G  G  G 
Sbjct: 1089 KGEQGPEGEKGEKGNEGLKGKEGSPGYPGIPGVRGPEGKPGKQGEKGKPGQKGSKGYQGQ 1148

Query: 238  NGE---------KGMTGPRGNRGKSGINGVPG 260
             GE         KG  GP+G+RG  G  G PG
Sbjct: 1149 LGEMGSPGKQGPKGNQGPKGSRGTLGPMGAPG 1180



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 76/133 (57%), Gaps = 6/133 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGYPGPQGIP 175
           GQKG++G  G  G  G  G KG  G    PGP G PGD+G+ GP G     GYPG QG+P
Sbjct: 571 GQKGDVGLPGLTGFPGPPGRKGYKGY---PGPLGHPGDQGEPGPAGSPGAKGYPGRQGLP 627

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+ GPKG  GY G  GL G  G  GE G+ G+PG+ G  G PG  G  G+ G PG +
Sbjct: 628 GPIGESGPKGTRGYIGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPGNFGERGPPGID 687

Query: 236 GTNGEKGMTGPRG 248
           G  GE G  GP G
Sbjct: 688 GNPGELGAPGPPG 700



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 90/167 (53%), Gaps = 9/167 (5%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            +  +G   S  +  P G  G  G  G++G  GE G+ G+RGE G  G  G  GP GI GD
Sbjct: 1029 MGHKGPPGSMGQPGPAGEPGMKGDPGQLGIPGEQGLVGQRGESGLEGDTGQLGPDGIKGD 1088

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G++GP+G+      +G  G+EG +G +G  GYPG  G+ G +G PG+ G  G PG+ G 
Sbjct: 1089 KGEQGPEGE------KGEKGNEGLKGKEGSPGYPGIPGVRGPEGKPGKQGEKGKPGQKGS 1142

Query: 217  DGIPGK---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+    G PGK G  G  G  G +G  GP G  G+ G  G PG
Sbjct: 1143 KGYQGQLGEMGSPGKQGPKGNQGPKGSRGTLGPMGAPGRMGAQGDPG 1189



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 79/154 (51%), Gaps = 15/154 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GPIG+ G  G +G +G+ G         ERG  G PG  G  G  G PG+ G+RGP 
Sbjct: 625 GLPGPIGESGPKGTRGYIGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPGNFGERGPP 684

Query: 164 G------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G      ++G PGP G+ G  G  GP G +GYPG  GL G  G PGE GL G  G  G  
Sbjct: 685 GIDGNPGELGAPGPPGVLGLIGDMGPVGPIGYPGPKGLKGLMGNPGEHGLKGDKGDQGRA 744

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           G+PG  G  G  G  G  G  G +G  GP G  G
Sbjct: 745 GVPGDIGFQGDKGSQGLPGVPGARGKAGPLGKVG 778



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 88/166 (53%), Gaps = 21/166 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY- 168
           G  GP G+KG  G  G +G  G++GE    G+PG  G PG QG+PG  G+ GPKG  GY 
Sbjct: 583 GFPGPPGRKGYKGYPGPLGHPGDQGEPGPAGSPGAKGYPGRQGLPGPIGESGPKGTRGYI 642

Query: 169 -----------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
                       G +GIPG  GKRG  G  G+PG  G  G  G+ G PG  G PG  G+ 
Sbjct: 643 GLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPGNFGERGPPGIDGNPGELGAPGPPGVL 702

Query: 218 GI------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G+       G  G PG  G+ G  G  GE G+ G +G++G++G+ G
Sbjct: 703 GLIGDMGPVGPIGYPGPKGLKGLMGNPGEHGLKGDKGDQGRAGVPG 748



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 103/236 (43%), Gaps = 70/236 (29%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDE 157
            G    T +  P G++G  G++G  G KGE G +G +G++G+PG  G P   GP+G PG +
Sbjct: 1072 GLEGDTGQLGPDGIKGDKGEQGPEGEKGEKGNEGLKGKEGSPGYPGIPGVRGPEGKPGKQ 1131

Query: 158  GKRGPK------------GDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLP 202
            G++G              G+MG PG QG  G++G +G +G    MG PGR+G  G  GL 
Sbjct: 1132 GEKGKPGQKGSKGYQGQLGEMGSPGKQGPKGNQGPKGSRGTLGPMGAPGRMGAQGDPGLK 1191

Query: 203  -------------------------------------------------GEPGLDGIPGR 213
                                                             GEPG  G PG+
Sbjct: 1192 GYQGHAGPPGPIGPPGPKGEKGQQGDDGKVEGPQGPPGDRGPVGDRGDRGEPGDTGYPGQ 1251

Query: 214  NGMD---GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             G+D   G PG+ GLPG  G PG  G  G KG  G +G +G  G  G  G+P I  
Sbjct: 1252 EGLDGERGKPGQQGLPGDPGSPGKPGAKGSKGDVGQKGKQGAQGSAGSRGSPGILG 1307



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/147 (44%), Positives = 75/147 (51%), Gaps = 18/147 (12%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G++G+ G PG+ G PGP G          KG  GYPGP G PGD+G
Sbjct: 557 QKGDPGLSPGKARNGQKGDVGLPGLTGFPGPPGR---------KGYKGYPGPLGHPGDQG 607

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPG 233
           + GP    G PG  G  GR GLPG  G  G  G  G  G+PG  GLPG D      G+PG
Sbjct: 608 EPGP---AGSPGAKGYPGRQGLPGPIGESGPKGTRGYIGLPGLFGLPGADGERGIPGVPG 664

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G  G RG  GI+G PG
Sbjct: 665 KRGKMGRPGFPGNFGERGPPGIDGNPG 691



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 88/187 (47%), Gaps = 33/187 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG++G  G++G  G  G +G  G RG KG PG  G  GP G+ G  G+ G  G  G+PG 
Sbjct: 939  PGIRGTKGRRGARGPDGPVGEPGARGAKGRPGEPGRVGPDGLQGKMGETGANGARGFPGI 998

Query: 171  --PQGIPG---------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
              P G PG                     + G +GP G MG PG  G     G+ G+PG 
Sbjct: 999  QGPSGPPGAKGAPGDPGPQGPQGPPGPLGEMGHKGPPGSMGQPGPAG---EPGMKGDPGQ 1055

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------RGNRGKSGINGVPGT 261
             GIPG  G+ G  G+ GL G  G  G +G  G+KG  GP      +GN G  G  G PG 
Sbjct: 1056 LGIPGEQGLVGQRGESGLEGDTGQLGPDGIKGDKGEQGPEGEKGEKGNEGLKGKEGSPGY 1115

Query: 262  PAICAYK 268
            P I   +
Sbjct: 1116 PGIPGVR 1122



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 99/222 (44%), Gaps = 45/222 (20%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           I L  + G   +  E   PG+ G  G+ G  G  G  G +G  G  G PG +G PGP G+
Sbjct: 642 IGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPGNFGERGPPGIDGNPGELGAPGPPGV 701

Query: 154 PGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMG---YPGRIGLDG---RDGL 201
            G  G  GP G +GYPGP+G+      PG+ G +G KGD G    PG IG  G     GL
Sbjct: 702 LGLIGDMGPVGPIGYPGPKGLKGLMGNPGEHGLKGDKGDQGRAGVPGDIGFQGDKGSQGL 761

Query: 202 PGEPGLDGI------------------------------PGRNGMDGI---PGKDGLPGK 228
           PG PG  G                               PG NG +G+   PG  GLPG 
Sbjct: 762 PGVPGARGKAGPLGKVGDKGPVGFPGPPGPEGFPGDIGPPGENGPEGLKGKPGARGLPGP 821

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+PG  G  G  G  G  G+ G+SG  G PGTP     K E
Sbjct: 822 RGLPGQEGDEGPLGPPGVPGSEGRSGRKGFPGTPGPNGPKGE 863



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/152 (44%), Positives = 79/152 (51%), Gaps = 12/152 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEGK 159
            PG  G  G  GE G  G+ GV G  G++G PGV G PG QG PG              GK
Sbjct: 1330 PGKDGVPGMLGEQGDDGDEGVTGMPGKRGNPGVPGLPGAQGPPGFKGERGLPGQTGQTGK 1389

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            RG  G  G PG  G PG +G+ G  G+ G+PG  GL G  G PG+ G  GI G  G  G+
Sbjct: 1390 RGSPGGTGLPGSPGEPGAKGQPGDFGEAGFPGIAGLFGPKGPPGDLGFKGIQGPRGPPGL 1449

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             GK+G+ G  GI G  G+ G KG  G RG  G
Sbjct: 1450 MGKEGIIGPLGIQGPMGSPGPKGDKGSRGEMG 1481



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 72/155 (46%), Gaps = 15/155 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE-------------- 157
            PG  GP G KGE G +G  G  GE+G  G  G VG PG  G  GD               
Sbjct: 852  PGTPGPNGPKGEPGNRGRPGKVGEQGLMGFIGPVGEPGIAGEKGDRGPVGPPGPPGVRGS 911

Query: 158  -GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G  G  G +G+PG  G  G  G RG  G  G  GR G  G DG  GEPG  G  GR G 
Sbjct: 912  MGHPGMPGGVGFPGIPGPTGPAGTRGAPGIRGTKGRRGARGPDGPVGEPGARGAKGRPGE 971

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G  G DGL GK G  G NG  G  G+ GP G  G
Sbjct: 972  PGRVGPDGLQGKMGETGANGARGFPGIQGPSGPPG 1006



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 88/188 (46%), Gaps = 42/188 (22%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G         P G  GP G KG +G  GE G+KG++G++G           G+PGD G +
Sbjct: 703 GLIGDMGPVGPIGYPGPKGLKGLMGNPGEHGLKGDKGDQGR---------AGVPGDIGFQ 753

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKG---------------------DMGYPGRIGLDGRD 199
           G KG  G PG   +PG  GK GP G                     D+G PG  G +G  
Sbjct: 754 GDKGSQGLPG---VPGARGKAGPLGKVGDKGPVGFPGPPGPEGFPGDIGPPGENGPEGLK 810

Query: 200 GLPGE---PGLDGIPGRNGMD------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG    PG  G+PG+ G +      G+PG +G  G+ G PGT G NG KG  G RG  
Sbjct: 811 GKPGARGLPGPRGLPGQEGDEGPLGPPGVPGSEGRSGRKGFPGTPGPNGPKGEPGNRGRP 870

Query: 251 GKSGINGV 258
           GK G  G+
Sbjct: 871 GKVGEQGL 878



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 87/199 (43%), Gaps = 45/199 (22%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKG---------------------ERGEKGAPGVVGPPG 149
           PPG  GP G KG+ GA+G  G +G                       G KG PG  GP G
Sbjct: 800 PPGENGPEGLKGKPGARGLPGPRGLPGQEGDEGPLGPPGVPGSEGRSGRKGFPGTPGPNG 859

Query: 150 PQGIPGDEG---KRGPKGDMGYPGPQGIPGDEGKRGPK---------------------G 185
           P+G PG+ G   K G +G MG+ GP G PG  G++G +                     G
Sbjct: 860 PKGEPGNRGRPGKVGEQGLMGFIGPVGEPGIAGEKGDRGPVGPPGPPGVRGSMGHPGMPG 919

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            +G+PG  G  G  G  G PG+ G  GR G  G  G  G PG  G  G  G  G  G  G
Sbjct: 920 GVGFPGIPGPTGPAGTRGAPGIRGTKGRRGARGPDGPVGEPGARGAKGRPGEPGRVGPDG 979

Query: 246 PRGNRGKSGINGVPGTPAI 264
            +G  G++G NG  G P I
Sbjct: 980 LQGKMGETGANGARGFPGI 998



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 82/195 (42%), Gaps = 39/195 (20%)

Query: 113  GLQGPIGQKGEIGAKGE---------------MGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            G  GP+G+ G  G KG+               MG  G  G  G PG+ GP GP G  G  
Sbjct: 880  GFIGPVGEPGIAGEKGDRGPVGPPGPPGVRGSMGHPGMPGGVGFPGIPGPTGPAGTRGAP 939

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G RG KG  G  GP G  G+ G RG KG  G PGR+G DG  G  GE G +G     G  
Sbjct: 940  GIRGTKGRRGARGPDGPVGEPGARGAKGRPGEPGRVGPDGLQGKMGETGANGA---RGFP 996

Query: 218  GIPGKDGLPGKD---------------------GIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            GI G  G PG                       G  G  G+ G+ G  G  G +G  G  
Sbjct: 997  GIQGPSGPPGAKGAPGDPGPQGPQGPPGPLGEMGHKGPPGSMGQPGPAGEPGMKGDPGQL 1056

Query: 257  GVPGTPAICAYKRES 271
            G+PG   +   + ES
Sbjct: 1057 GIPGEQGLVGQRGES 1071



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 95/256 (37%), Gaps = 96/256 (37%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------- 144
            ++G   +  E+   GL+G  G +G  G  G++G +G++G +G PGV             
Sbjct: 721 GLKGLMGNPGEH---GLKGDKGDQGRAGVPGDIGFQGDKGSQGLPGVPGARGKAGPLGKV 777

Query: 145 --------------------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR--- 181
                               +GPPG  G    EG +G  G  G PGP+G+PG EG     
Sbjct: 778 GDKGPVGFPGPPGPEGFPGDIGPPGENG---PEGLKGKPGARGLPGPRGLPGQEGDEGPL 834

Query: 182 ------------------------GPKGDMGYPGRIGLDGRDGL------PGEPGLD--- 208
                                   GPKG+ G  GR G  G  GL       GEPG+    
Sbjct: 835 GPPGVPGSEGRSGRKGFPGTPGPNGPKGEPGNRGRPGKVGEQGLMGFIGPVGEPGIAGEK 894

Query: 209 ---------------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                                G+PG  G  GIPG  G  G  G PG  GT G +G  GP 
Sbjct: 895 GDRGPVGPPGPPGVRGSMGHPGMPGGVGFPGIPGPTGPAGTRGAPGIRGTKGRRGARGPD 954

Query: 248 GNRGKSGINGVPGTPA 263
           G  G+ G  G  G P 
Sbjct: 955 GPVGEPGARGAKGRPG 970



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/117 (45%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG QGP G KGE G  G+ G  G+RG  G    PG  G PG +G PGD G+ G  G  G 
Sbjct: 1366 PGAQGPPGFKGERGLPGQTGQTGKRGSPGGTGLPGSPGEPGAKGQPGDFGEAGFPGIAGL 1425

Query: 169  PGPQGIPGD---EGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             GP+G PGD   +G +GP+G    MG  G IG  G  G  G PG  G  G  G  G+
Sbjct: 1426 FGPKGPPGDLGFKGIQGPRGPPGLMGKEGIIGPLGIQGPMGSPGPKGDKGSRGEMGL 1482



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 55/107 (51%), Gaps = 12/107 (11%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD- 156
             + G    T +   PG  G  G  GE GAKG+    G+ GE G PG+ G  GP+G PGD 
Sbjct: 1379 GLPGQTGQTGKRGSPGGTGLPGSPGEPGAKGQ---PGDFGEAGFPGIAGLFGPKGPPGDL 1435

Query: 157  -----EGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
                 +G RGP G MG     GP GI G  G  GPKGD G  G +GL
Sbjct: 1436 GFKGIQGPRGPPGLMGKEGIIGPLGIQGPMGSPGPKGDKGSRGEMGL 1482



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 42/85 (49%)

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           + G KGD+G PG  G  G  G  G  G  G  G  G  G PG  G PG  G PG  G  G
Sbjct: 569 RNGQKGDVGLPGLTGFPGPPGRKGYKGYPGPLGHPGDQGEPGPAGSPGAKGYPGRQGLPG 628

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAI 264
             G +GP+G RG  G+ G+ G P  
Sbjct: 629 PIGESGPKGTRGYIGLPGLFGLPGA 653


>gi|350399883|ref|XP_003485670.1| PREDICTED: hypothetical protein LOC100743696 [Bombus impatiens]
          Length = 2763

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 83/173 (47%), Gaps = 24/173 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ GP GQ G +G  G  G  G  G KG  G  GP G QGI G  G+ G  G  G  GPQ
Sbjct: 1622 GIAGPPGQPGTVGKPGSPGFPGSPGVKGDQGAQGPKGSQGIQGPRGETGRPGQPGESGPQ 1681

Query: 173  G------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G      IPG++G  G  G +G PG  G  G+ G+PG P   G+PG  GM G+ G+ G  
Sbjct: 1682 GPQGKDGIPGEKGSTGAAGLVGAPGFPGARGQPGIPGNP---GVPGAKGMPGLSGERGFK 1738

Query: 227  GKDGIPG---------------TNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G                 G  G++GM GP G  G +G  G PG P +
Sbjct: 1739 GDSGAKGDSGTPGPRGLPGPPGNEGKRGKRGMRGPIGTSGPAGERGAPGAPGL 1791



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 72/130 (55%), Gaps = 9/130 (6%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            + GA G  G +G +GE G  GV G  GP+G PG  G  GPKGD G         +EG++G
Sbjct: 2358 QAGAPGSTGERGPKGETGPQGVEGQQGPRGKPGPVGLEGPKGDRG---------EEGQKG 2408

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             KG  G+ G  GL G  GLPGE G+ G+PG  G DG  G  G PG+DG PG  G  G  G
Sbjct: 2409 AKGHRGFTGLQGLPGPTGLPGEKGIPGLPGLPGKDGESGPRGSPGRDGSPGPIGLTGNPG 2468

Query: 243  MTGPRGNRGK 252
              GP G  G+
Sbjct: 2469 PKGPSGEEGR 2478



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 85/164 (51%), Gaps = 21/164 (12%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            +G  G++G  G  G  G  GERG  GAPG+ GP GP G  G  G RGP G MG  G  G 
Sbjct: 1762 EGKRGKRGMRGPIGTSGPAGERGAPGAPGLPGPDGPMGPKGQSGDRGPIGPMGLRGANGD 1821

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRN---GMDGIPGKDGLPGK 228
            PG  G  G +G  G  GR G  G+ G PG+ G+   DG PG     G+ G+PG  GLPG+
Sbjct: 1822 PGRPGSPGLQGTRGLMGRPGAPGKPGNPGDRGIQGADGKPGEQGPAGLQGLPGPIGLPGE 1881

Query: 229  DGIPGTNGT---------------NGEKGMTGPRGNRGKSGING 257
             G PG  G                 G++G  GP+G+ G SG++G
Sbjct: 1882 KGYPGEPGKAGEPGNPGPPGPRGDTGKEGAPGPQGSPGPSGVDG 1925



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 88/173 (50%), Gaps = 24/173 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            G+QGP G+ G  G  GE G         + GE+G  GA G+VG PG    PG  G+ G  
Sbjct: 1661 GIQGPRGETGRPGQPGESGPQGPQGKDGIPGEKGSTGAAGLVGAPG---FPGARGQPGIP 1717

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL------------DGRDGLPGEPGLDGIP 211
            G+ G PG +G+PG  G+RG KGD G  G  G             +G+ G  G  G  G  
Sbjct: 1718 GNPGVPGAKGMPGLSGERGFKGDSGAKGDSGTPGPRGLPGPPGNEGKRGKRGMRGPIGTS 1777

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G PG  GLPG DG  G  G +G++G  GP G RG +G  G PG+P +
Sbjct: 1778 GPAGERGAPGAPGLPGPDGPMGPKGQSGDRGPIGPMGLRGANGDPGRPGSPGL 1830



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 88/180 (48%), Gaps = 15/180 (8%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---------- 145
            LV   GF  +  +   PG  G  G KG  G  GE G KG+ G KG  G            
Sbjct: 1701 LVGAPGFPGARGQPGIPGNPGVPGAKGMPGLSGERGFKGDSGAKGDSGTPGPRGLPGPPG 1760

Query: 146  --GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK---GDMGYPGRIGLDGRDG 200
              G  G +G+ G  G  GP G+ G PG  G+PG +G  GPK   GD G  G +GL G +G
Sbjct: 1761 NEGKRGKRGMRGPIGTSGPAGERGAPGAPGLPGPDGPMGPKGQSGDRGPIGPMGLRGANG 1820

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG PG  G+ G  G+ G PG  G PG  G  G  G +G+ G  GP G +G  G  G+PG
Sbjct: 1821 DPGRPGSPGLQGTRGLMGRPGAPGKPGNPGDRGIQGADGKPGEQGPAGLQGLPGPIGLPG 1880



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/118 (46%), Positives = 70/118 (59%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  G  G++G  G  G  GV+G++G +G PG VG  GP+G  G+EG++G KG  G+ G Q
Sbjct: 2360 GAPGSTGERGPKGETGPQGVEGQQGPRGKPGPVGLEGPKGDRGEEGQKGAKGHRGFTGLQ 2419

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            G+PG  G  G KG  G PG  G DG  G  G PG DG PG  G+ G PG  G  G++G
Sbjct: 2420 GLPGPTGLPGEKGIPGLPGLPGKDGESGPRGSPGRDGSPGPIGLTGNPGPKGPSGEEG 2477



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 79/171 (46%), Gaps = 27/171 (15%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            G  G+ G  GE GE G PG VGP GP+G+PG  G  G KG  G+PG  G  G++G  G K
Sbjct: 1523 GLPGKDGNTGEDGEPGPPGSVGPVGPRGLPGMPGLPGVKGHRGFPGLDGAKGEQGVSGEK 1582

Query: 185  GDMGYPGRIG---------------------------LDGRDGLPGEPGLDGIPGRNGMD 217
            G MG PG +G                           +DG  G PG+PG  G PG  G  
Sbjct: 1583 GSMGVPGPMGHVGPMGPAGPRGERGREGPPGPPGIRGVDGIAGPPGQPGTVGKPGSPGFP 1642

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G PG  G  G  G  G+ G  G +G TG  G  G+SG  G  G   I   K
Sbjct: 1643 GSPGVKGDQGAQGPKGSQGIQGPRGETGRPGQPGESGPQGPQGKDGIPGEK 1693



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/161 (46%), Positives = 89/161 (55%), Gaps = 9/161 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP+G KG+ G +G +G  G RG  G PG  G PG QG  G  G+ G  G  G PG 
Sbjct: 1792 PGPDGPMGPKGQSGDRGPIGPMGLRGANGDPGRPGSPGLQGTRGLMGRPGAPGKPGNPGD 1851

Query: 172  QGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGL 225
            +GI G +GK   +GP G  G PG IGL G  G PGEPG  G PG  G  G     GK+G 
Sbjct: 1852 RGIQGADGKPGEQGPAGLQGLPGPIGLPGEKGYPGEPGKAGEPGNPGPPGPRGDTGKEGA 1911

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPGTPA 263
            PG  G PG +G +GE+G  G  G    +G  G+ G PGTP 
Sbjct: 1912 PGPQGSPGPSGVDGERGPPGSPGPRGFQGFPGVTGNPGTPG 1952



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/133 (45%), Positives = 71/133 (53%), Gaps = 3/133 (2%)

Query: 134  GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            G  GE+G  G +G PGP   PG+  +RG  G  G PG  G PG+ G+RGP+G  G  G  
Sbjct: 2060 GRIGERGPQGQIGSPGP---PGEPAERGDPGLPGPPGEVGAPGNPGERGPQGLQGLQGFP 2116

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G  G  GLPG  G  G PG  G  G PG  G PG+ G  G  G  G KG+ G  G RG+ 
Sbjct: 2117 GPQGLIGLPGLKGDRGYPGLKGDQGNPGLPGSPGETGPQGLVGLTGAKGVRGEPGARGEP 2176

Query: 254  GINGVPGTPAICA 266
            GI G PG P I  
Sbjct: 2177 GIMGPPGVPGIVG 2189



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 84/185 (45%), Gaps = 42/185 (22%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQ------------GIPGDEGKRGP---KGDMGYPGPQ 172
            G +G +G +G+ G+PG  G P  +            G PG+ G+RGP   +G  G+PGPQ
Sbjct: 2060 GRIGERGPQGQIGSPGPPGEPAERGDPGLPGPPGEVGAPGNPGERGPQGLQGLQGFPGPQ 2119

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------GLDGIPGRNGMDGIPGKDGLP 226
            G+ G  G    KGD GYPG  G  G  GLPG P      GL G+ G  G+ G PG  G P
Sbjct: 2120 GLIGLPGL---KGDRGYPGLKGDQGNPGLPGSPGETGPQGLVGLTGAKGVRGEPGARGEP 2176

Query: 227  ---GKDGIPGTNGTNG---------------EKGMTGPRGNRGKSGINGVPGTPAICAYK 268
               G  G+PG  G  G                KG  G  G  G  G  G PG+P     K
Sbjct: 2177 GIMGPPGVPGIVGATGPPGAIGPSGPPGLPGSKGNIGETGRAGNPGPIGNPGSPGADGNK 2236

Query: 269  RESCS 273
             ES S
Sbjct: 2237 GESGS 2241



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 88/186 (47%), Gaps = 33/186 (17%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L  +QGF         PG QG IG  G  G +G  G+KG++G  G PG  G  GPQG+ G
Sbjct: 2109 LQGLQGF---------PGPQGLIGLPGLKGDRGYPGLKGDQGNPGLPGSPGETGPQGLVG 2159

Query: 156  DEGKR------GPKGDMGYPGPQGIPGDEGKRGP---------------KGDMGYPGRIG 194
              G +      G +G+ G  GP G+PG  G  GP               KG++G  GR G
Sbjct: 2160 LTGAKGVRGEPGARGEPGIMGPPGVPGIVGATGPPGAIGPSGPPGLPGSKGNIGETGRAG 2219

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              G  G PG PG DG  G +G  G PG  G  G  G PG  G  G  G +GP G R   G
Sbjct: 2220 NPGPIGNPGSPGADGNKGESGSQGPPGTPGPQGPQGSPGERGLPGLPGPSGPIGAR---G 2276

Query: 255  INGVPG 260
            I G PG
Sbjct: 2277 IRGAPG 2282



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 72/154 (46%), Gaps = 33/154 (21%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMG 167
            P GL+G  G  G  G+ G  G +G  G  GAPG  G PG +GI G +GK   +GP G  G
Sbjct: 1812 PMGLRGANGDPGRPGSPGLQGTRGLMGRPGAPGKPGNPGDRGIQGADGKPGEQGPAGLQG 1871

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------------GLPGEPGLDGIPGRNG 215
             PGP G+PG++         GYPG  G  G              G  G PG  G PG +G
Sbjct: 1872 LPGPIGLPGEK---------GYPGEPGKAGEPGNPGPPGPRGDTGKEGAPGPQGSPGPSG 1922

Query: 216  MDGIPGK---------DGLPGKDGIPGTNGTNGE 240
            +DG  G           G PG  G PGT G +GE
Sbjct: 1923 VDGERGPPGSPGPRGFQGFPGVTGNPGTPGKDGE 1956



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 91/238 (38%), Gaps = 96/238 (40%)

Query: 116  GPIGQKGEIGAKGEMGVKGER---------------GEKGAPGVVGPPGP------QGIP 154
            GPIG  G  GA G  G  G +               GE+G PG+ GP GP      +G P
Sbjct: 2222 GPIGNPGSPGADGNKGESGSQGPPGTPGPQGPQGSPGERGLPGLPGPSGPIGARGIRGAP 2281

Query: 155  GDE---------------------GKRGPKGDM---------------GYPGPQG----- 173
            G+                      G  GP G++               G PG +G     
Sbjct: 2282 GESGVPGKPGPEGPPGPPGQVGPIGPHGPSGEIGPEGPSGKPGPPGIAGRPGDKGPPGAV 2341

Query: 174  -------------------IPGDEGKRGPKGDM------------GYPGRIGLDGRDGLP 202
                                PG  G+RGPKG+             G PG +GL+G  G  
Sbjct: 2342 GQTGLPGSPGLPGPPGQAGAPGSTGERGPKGETGPQGVEGQQGPRGKPGPVGLEGPKGDR 2401

Query: 203  GEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GE G  G  G     G+ G+PG  GLPG+ GIPG  G  G+ G +GPRG+ G+ G  G
Sbjct: 2402 GEEGQKGAKGHRGFTGLQGLPGPTGLPGEKGIPGLPGLPGKDGESGPRGSPGRDGSPG 2459



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 69/141 (48%), Gaps = 27/141 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G +G +G  G  GV+GE G +G PG++GPPG   +PG  G  GP G +G  GP
Sbjct: 2146 PGSPGETGPQGLVGLTGAKGVRGEPGARGEPGIMGPPG---VPGIVGATGPPGAIGPSGP 2202

Query: 172  ------QGIPGDEGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGL 207
                  +G  G+ G+ G  G +G PG  G DG  G                   PGE GL
Sbjct: 2203 PGLPGSKGNIGETGRAGNPGPIGNPGSPGADGNKGESGSQGPPGTPGPQGPQGSPGERGL 2262

Query: 208  DGIPGRNGMDGIPGKDGLPGK 228
             G+PG +G  G  G  G PG+
Sbjct: 2263 PGLPGPSGPIGARGIRGAPGE 2283



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 18/88 (20%)

Query: 111  PPGLQGPIGQKGEIGAKGE---------------MGVKGERGEKGAPGVV---GPPGPQG 152
            P GL+GP G +GE G KG                 G+ GE+G  G PG+    G  GP+G
Sbjct: 2391 PVGLEGPKGDRGEEGQKGAKGHRGFTGLQGLPGPTGLPGEKGIPGLPGLPGKDGESGPRG 2450

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
             PG +G  GP G  G PGP+G  G+EG+
Sbjct: 2451 SPGRDGSPGPIGLTGNPGPKGPSGEEGR 2478


>gi|395824054|ref|XP_003785287.1| PREDICTED: collagen alpha-1(XXVII) chain [Otolemur garnettii]
          Length = 1858

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/182 (43%), Positives = 100/182 (54%), Gaps = 13/182 (7%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            +GP G  G+ G  G+ G +GE G+ G PG  G PG +G PG +G+ G  G  G PGP+G 
Sbjct: 1337 EGPRGPPGDRGPVGDRGDRGEPGDPGYPGQEGIPGLRGKPGQQGQPGHPGPQGRPGPKGS 1396

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
             G EG +G +G  G PGR G+ G  GLPG     G+ GR G +GI G DGLPG+DG  G 
Sbjct: 1397 KGAEGPKGKQGKAGAPGRRGVQGLQGLPGP---QGVVGRQGPEGIAGPDGLPGRDGQAGQ 1453

Query: 235  NGT---NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVG 291
             G    +G+ G  GP G RG  G+ G+PG      +K ES   LP       L PP   G
Sbjct: 1454 QGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRG 1506

Query: 292  SE 293
            +E
Sbjct: 1507 TE 1508



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 94/175 (53%), Gaps = 24/175 (13%)

Query: 111  PPGLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGP---PGPQGIPGDEG 158
            PPG +GP+G +G+ G  G+ G         ++G+ G++G PG  GP   PGP+G  G EG
Sbjct: 1342 PPGDRGPVGDRGDRGEPGDPGYPGQEGIPGLRGKPGQQGQPGHPGPQGRPGPKGSKGAEG 1401

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---------DG 209
             +G +G  G PG +G+ G +G  GP+G +G  G  G+ G DGLPG  G          DG
Sbjct: 1402 PKGKQGKAGAPGRRGVQGLQGLPGPQGVVGRQGPEGIAGPDGLPGRDGQAGQQGEQGDDG 1461

Query: 210  IP---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             P   G  G  G PG  GLPG  G PG  G +G  G  GP G RG  G  G+PG+
Sbjct: 1462 DPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGS 1516



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 88/175 (50%), Gaps = 30/175 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--------------- 157
            G +GP G++G+ GA G  GV+G +G  G  GVVG  GP+GI G +               
Sbjct: 1398 GAEGPKGKQGKAGAPGRRGVQGLQGLPGPQGVVGRQGPEGIAGPDGLPGRDGQAGQQGEQ 1457

Query: 158  ------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                        GKRG  G  G PG QG PG +G+ G  G +G PG+ G +G  GLP   
Sbjct: 1458 GDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGSQ 1517

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G
Sbjct: 1518 GEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIG 1572



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG +GPPG         KRG +G  G 
Sbjct: 1463 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGGTGL 1513

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 1514 PGSQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGP 1573

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1574 LGILGPSGLPGPKGDKGSRGDWG 1596



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP G+ G  G+KG  G KG++G+ GAPG  G  G QG+PG +G  G +G  G  GP
Sbjct: 1382 PGHPGPQGRPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPQGVVGRQGPEGIAGP 1441

Query: 172  QGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G+P               GD G  GP G  G PG  GL G  G PG  G  G+PG+   
Sbjct: 1442 DGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQL-- 1499

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G PGK G  G  G+PG+ G  G KG  G  G  G  G+ G+
Sbjct: 1500 -GPPGKRGTEGGTGLPGSQGEPGSKGQPGDSGEMGFPGMAGL 1540



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 87/162 (53%), Gaps = 21/162 (12%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYPGPQGI 174
           K   GAKG++G+ G  G  G PG  G    PGP G PG++G+ GP+G     GYPG QG+
Sbjct: 682 KAHDGAKGDIGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQLGPEGSPGAKGYPGRQGL 741

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G+PG  G+ G+ G PG 
Sbjct: 742 PGPVGDSGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGL 801

Query: 235 NGTNGEK---------------GMTGPRGNRGKSGINGVPGT 261
           +G  GE                G+ GP G  G  G+ G+ G+
Sbjct: 802 DGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGS 843



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 97/208 (46%), Gaps = 60/208 (28%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRG----- 161
            G  GP G KG +G+ GE G+KG++GE+G PGV G PG       QG+PG  G RG     
Sbjct: 830  GYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPGPL 889

Query: 162  -------------------------------PKGDMGYPGPQGIPGDEGKRGPKGD---- 186
                                           P+G+ G PG +G+PG  G+ GP+GD    
Sbjct: 890  GKVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGEKGKPGARGLPGPCGQLGPEGDEGPM 949

Query: 187  --MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
               G PG  G  GR G PG PGLDG     G  G PG+ G  G+ G+ G  G  GE G+ 
Sbjct: 950  GPAGAPGLEGQPGRKGFPGRPGLDGA---KGEPGDPGRPGPVGEQGLMGFIGLVGEPGIV 1006

Query: 245  GPRGNR---------GKSGINGVPGTPA 263
            G +G+R         G  G+ G PGTP 
Sbjct: 1007 GEKGDRGMMGPPGAPGPKGVMGHPGTPG 1034



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 700 PGPPGRKGHKGYPGPAGHPGEQGQLGPEGSPGAKGYPGRQGLPGPVGDSGPKGSRGYIGL 759

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN----------- 214
           PG  G+PG +G+RG  G  G  G++G+ G  G+ GE   PGLDG PG             
Sbjct: 760 PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGL 819

Query: 215 -GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G PG  G+ G  G+ GE G+ G +G +G  G++G PG
Sbjct: 820 IGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 866



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 87/203 (42%), Gaps = 49/203 (24%)

Query: 98   AMQGFCNSTKEYCPPGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
              +G         PPG+   +GP G+ G++G KG  G KG +G +G  G +G PG    P
Sbjct: 1217 GQEGLMGEDGPQGPPGITGVRGPEGKSGKLGEKGRTGAKGAKGYQGQLGEMGAPG---DP 1273

Query: 155  GDEGKRGPKGDMGYPGPQGIPG-------------------------------------- 176
            G  G  GPKG  G  GP G PG                                      
Sbjct: 1274 GSPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGED 1333

Query: 177  --DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
               EG RGP GD G  G  G  G  G PG PG +GIP   G+ G PG+ G PG  G  G 
Sbjct: 1334 GKAEGPRGPPGDRGPVGDRGDRGEPGDPGYPGQEGIP---GLRGKPGQQGQPGHPGPQGR 1390

Query: 235  NGTNGEKGMTGPRGNRGKSGING 257
             G  G KG  GP+G +GK+G  G
Sbjct: 1391 PGPKGSKGAEGPKGKQGKAGAPG 1413



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 96/225 (42%), Gaps = 60/225 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---------------------------------- 138
            GL+GP G +G +G  G+ GV GERG                                   
Sbjct: 1079 GLKGPPGPQGRLGRPGQQGVAGERGHLGLRGFSGIPGPSGPPGTKGLPGEPGPQGPQGPI 1138

Query: 139  --------KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                    KG PG VG PG   +PG+ G +G  G +G PG QG+ G  G+ G +GD G  
Sbjct: 1139 GPPGEMGPKGPPGAVGEPG---LPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGLA 1195

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------GEKGMT 244
            G  GL G     G+PG DG  G  G +G+ G+DG  G  GI G  G        GEKG T
Sbjct: 1196 GPDGLKGDR---GDPGPDGEHGEKGQEGLMGEDGPQGPPGITGVRGPEGKSGKLGEKGRT 1252

Query: 245  GPRGNR------GKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
            G +G +      G+ G  G PG+P     K    SL P     ++
Sbjct: 1253 GAKGAKGYQGQLGEMGAPGDPGSPGTPGPKGSRGSLGPTGAPGRM 1297



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 79/157 (50%), Gaps = 18/157 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG IGQ+GE G +G+ G+ G  G KG     G PGP    G+ G++G +G MG  GP
Sbjct: 1174 PGEQGLIGQRGEPGLEGDSGLAGPDGLKGD---RGDPGPD---GEHGEKGQEGLMGEDGP 1227

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG PG  G RGP            +G+ G  GE G  G  G  G  G  G+ G PG  G 
Sbjct: 1228 QGPPGITGVRGP------------EGKSGKLGEKGRTGAKGAKGYQGQLGEMGAPGDPGS 1275

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            PGT G  G +G  GP G  G+ G  G PG      +K
Sbjct: 1276 PGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHK 1312



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 88/205 (42%), Gaps = 42/205 (20%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +G+        P G  GP G +G IG  G  G+ G  GE+G PGV G  G  G+PG  
Sbjct: 731 GAKGYPGRQGLPGPVGDSGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFP 790

Query: 158 ---GKRGPK---------------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
              G+RGP                      GD+G  GP G PG +G +G  G +G PG  
Sbjct: 791 GVFGERGPPGLDGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLK 850

Query: 194 GLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------------ 238
           G  G  G+P   G+PG  G  G  G+ G PG  G PG  G  G  G+             
Sbjct: 851 GDKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPGPLGKVGDKGSLGFPGPPGPEGFP 910

Query: 239 ---GEKGMTGPRGNRGKSGINGVPG 260
              G  G  GP G +GK G  G+PG
Sbjct: 911 GDIGPPGDNGPEGEKGKPGARGLPG 935



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 86/186 (46%), Gaps = 36/186 (19%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG  GP G+KG+ GA+G  G  G+ G +G  G +GP G  G+ G  G++G  G  G  G
Sbjct: 915  PPGDNGPEGEKGKPGARGLPGPCGQLGPEGDEGPMGPAGAPGLEGQPGRKGFPGRPGLDG 974

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------PGLDGIPGRNG 215
             +G PGD G+ GP G+ G  G IGL G  G+ GE                G+ G PG  G
Sbjct: 975  AKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGMMGPPGAPGPKGVMGHPGTPG 1034

Query: 216  ---------------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                                 M G  G+ G  G DG  G  G+ G KG  GP+G  G+ G
Sbjct: 1035 DVGTPGEPGPPGPPGSRGPPGMRGPKGRQGPRGPDGPTGEQGSRGLKGPPGPQGRLGRPG 1094

Query: 255  INGVPG 260
              GV G
Sbjct: 1095 QQGVAG 1100



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 86/179 (48%), Gaps = 39/179 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGK 159
           PG  G  G++G++G +G  G KG  G +G PG VG  GP+G            +PG +G+
Sbjct: 712 PGPAGHPGEQGQLGPEGSPGAKGYPGRQGLPGPVGDSGPKGSRGYIGLPGLFGLPGSDGE 771

Query: 160 R------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---------------IGLDGR 198
           R      G +G MG P   G PG  G+RGP G  G PG                +G+ G 
Sbjct: 772 RGLPGVPGKRGKMGMP---GFPGVFGERGPPGLDGNPGELGLPGPPGVPGLIGDLGVLGP 828

Query: 199 DGLPGEPGLDGI---PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G PG  G+ G+    G  G+ G  G+ G+PG  G PG  G  G +G+ G  G RGK G
Sbjct: 829 IGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPG 887



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 72/151 (47%), Gaps = 39/151 (25%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++
Sbjct: 671 GQKGDPGLSPGKAHDGAKGDIGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQ 721

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---------GLPGKD 229
           G+ GP+G                   PG  G PGR G+ G  G           GLPG  
Sbjct: 722 GQLGPEGS------------------PGAKGYPGRQGLPGPVGDSGPKGSRGYIGLPGLF 763

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+P   G++GE+G+ G  G RGK G+ G PG
Sbjct: 764 GLP---GSDGERGLPGVPGKRGKMGMPGFPG 791



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 79/185 (42%), Gaps = 51/185 (27%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR-------------------- 160
            +G  G +G  G  G  GE+G+ G+ GPPGPQG  G  G++                    
Sbjct: 1057 RGPKGRQGPRGPDGPTGEQGSRGLKGPPGPQGRLGRPGQQGVAGERGHLGLRGFSGIPGP 1116

Query: 161  ----------------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                                        GPKG  G  G  G+PG+ G +G  G +G PG 
Sbjct: 1117 SGPPGTKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEPGLPGEAGMKGDLGPLGTPGE 1176

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             GL G+    GEPGL+G  G  G DG+ G  G PG DG  G  G  G  G  GP+G  G 
Sbjct: 1177 QGLIGQR---GEPGLEGDSGLAGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPQGPPGI 1233

Query: 253  SGING 257
            +G+ G
Sbjct: 1234 TGVRG 1238



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 76/174 (43%), Gaps = 36/174 (20%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G +G +G  G  G++G+ G KG PG  G  G +G PGD G+ GP G+ G  G
Sbjct: 936  PCGQLGPEGDEGPMGPAGAPGLEGQPGRKGFPGRPGLDGAKGEPGDPGRPGPVGEQGLMG 995

Query: 171  PQGIPGDEGKRGPKGD---------------MGYPGRIG--------------------- 194
              G+ G+ G  G KGD               MG+PG  G                     
Sbjct: 996  FIGLVGEPGIVGEKGDRGMMGPPGAPGPKGVMGHPGTPGDVGTPGEPGPPGPPGSRGPPG 1055

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            + G  G  G  G DG  G  G  G+ G  G  G+ G PG  G  GE+G  G RG
Sbjct: 1056 MRGPKGRQGPRGPDGPTGEQGSRGLKGPPGPQGRLGRPGQQGVAGERGHLGLRG 1109



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 54/100 (54%), Gaps = 12/100 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G  G  G++GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 1498 QLGPPGKRGTEGGTGLPGSQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQG 1557

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
             RGP G MG     GP GI G  G  GPKGD G  G  GL
Sbjct: 1558 PRGPPGLMGKEGIIGPLGILGPSGLPGPKGDKGSRGDWGL 1597



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 95/229 (41%), Gaps = 72/229 (31%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGE---IGAKGEMGVKGERGEKGAP---------GVVGPP 148
            G   +  E   PG  GP+G++G    IG  GE G+ GE+G++G           GV+G P
Sbjct: 971  GLDGAKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGMMGPPGAPGPKGVMGHP 1030

Query: 149  GPQGIPGD------------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G    PGD                   G RGPKG  G  GP G  G++G RG KG  G  
Sbjct: 1031 G---TPGDVGTPGEPGPPGPPGSRGPPGMRGPKGRQGPRGPDGPTGEQGSRGLKGPPGPQ 1087

Query: 191  GRIGLDGRDGLPGEPGLDGIP------------------------------------GRN 214
            GR+G  G+ G+ GE G  G+                                     G  
Sbjct: 1088 GRLGRPGQQGVAGERGHLGLRGFSGIPGPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGPK 1147

Query: 215  GMDGIPGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G+ GLPG+ G+    G  GT GE+G+ G RG  G  G +G+ G
Sbjct: 1148 GPPGAVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGLAG 1196


>gi|345306087|ref|XP_001506296.2| PREDICTED: collagen alpha-1(V) chain [Ornithorhynchus anatinus]
          Length = 1936

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 83/148 (56%), Gaps = 3/148 (2%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KG  G +G  G KGE+GE G PG  G  G +G  G+ G  GP+G+ G  GP+
Sbjct: 885  GYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPAGPRGEDGPEGPK 944

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  G  G  GP G  G  G++G+ G   LPG PG  G  G  G  G PG +G  G  G P
Sbjct: 945  GRGGPNGDPGPLGPAGEKGKLGVPG---LPGYPGRQGPKGSIGFPGFPGANGEKGGRGTP 1001

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G +G  G++G TGPRG RG  GI G PG
Sbjct: 1002 GKSGPRGQRGPTGPRGERGPRGITGKPG 1029



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 93/202 (46%), Gaps = 33/202 (16%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------VV 145
              QG         PPG +GP+G+ G  G  G  G  G  G++G PG             +
Sbjct: 825  GAQGLPGPQGAIGPPGDKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPSGPQGPI 884

Query: 146  GPPGPQGIPGDEGKRG------PKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLD 196
            G PGP+G+ G +G RG       KG+ G+PG     GI GD G+ GP G  G  G  G  
Sbjct: 885  GYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPAGPRGEDGPEGPK 944

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------IPGTNGTNGEKG------MT 244
            GR G  G+PG  G  G  G  G+PG  G PG+ G       PG  G NGEKG       +
Sbjct: 945  GRGGPNGDPGPLGPAGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKS 1004

Query: 245  GPRGNRGKSGINGVPGTPAICA 266
            GPRG RG +G  G  G   I  
Sbjct: 1005 GPRGQRGPTGPRGERGPRGITG 1026



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 72/152 (47%), Gaps = 30/152 (19%)

Query: 142 PGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD------------ 186
           PG  G PGPQG    PGD+G  G  G  G PG  G PG  GK GP G+            
Sbjct: 824 PGAQGLPGPQGAIGPPGDKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPSGPQGP 883

Query: 187 MGYPGRIGLDGRDGL------PGEPGLDGIPGRNGMDGI---------PGKDGLPGKDGI 231
           +GYPG  G+ G DG+       GE G DG PG  G  GI          G  G  G +G 
Sbjct: 884 IGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPAGPRGEDGPEGP 943

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G NG+ G  GP G +GK G+ G+PG P 
Sbjct: 944 KGRGGPNGDPGPLGPAGEKGKLGVPGLPGYPG 975



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 61/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1502 QGEKGAKGESGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 1558

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1559 PGPLGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGI 1618



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 93/227 (40%), Gaps = 75/227 (33%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPGVVGPP 148
           G+ G  G KG+ G  G  G+ GE+G +                        G  G+ G P
Sbjct: 717 GMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEP 776

Query: 149 GPQG---------------IPGDEGKRGPKGDMGY------------PGPQGIPGDEGKR 181
           GP+G               + G +G+ GPKG++G             PG QG+PG +G  
Sbjct: 777 GPRGLLGPKGPPGPSGPPGVTGMDGQTGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAI 836

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------------ 229
           GP GD G  G+            PGL G+PG +G  G PGK+G PG+             
Sbjct: 837 GPPGDKGPLGK------------PGLPGMPGADGPPGHPGKEGPPGEKGGQGPSGPQGPI 884

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           G PG  G  G  G+ G +G +G+ G +G PG       K +   + P
Sbjct: 885 GYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGP 931



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 84/218 (38%), Gaps = 87/218 (39%)

Query: 127 KGEMGVKGER---------GEKGAPGVVGPP----------------------------- 148
           +G  G  G R         G++G  G+ G P                             
Sbjct: 707 RGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGE 766

Query: 149 -GPQGIPGDEGKR------------------------GPKGDMGY------------PGP 171
            GP+G+PG+ G R                        GPKG++G             PG 
Sbjct: 767 VGPRGLPGEPGPRGLLGPKGPPGPSGPPGVTGMDGQTGPKGNVGPQGEPGPPGQQGNPGA 826

Query: 172 QGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---------GI 219
           QG+PG +G  GP GD   +G PG  G+ G DG PG PG +G PG  G           G 
Sbjct: 827 QGLPGPQGAIGPPGDKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPSGPQGPIGY 886

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PG  G+ G DGI G  GT GEKG  G  G +G  GI G
Sbjct: 887 PGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKG 924



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 974  PGRQGP---KGSIGFPGFPGANGEKGGRGTPGKSGPRGQRGPTGPRGERGPRGITGKPGP 1030

Query: 172  QG 173
            +G
Sbjct: 1031 KG 1032



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 55/105 (52%), Gaps = 6/105 (5%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KG  G  G+ G  G  GEKG  GV   PG  G P   G++GPKG +G+PG
Sbjct: 934  PRGEDGPEGPKGRGGPNGDPGPLGPAGEKGKLGV---PGLPGYP---GRQGPKGSIGFPG 987

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
              G  G++G RG  G  G  G+ G  G  G  G  G+ G PG  G
Sbjct: 988  FPGANGEKGGRGTPGKSGPRGQRGPTGPRGERGPRGITGKPGPKG 1032



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR-------------- 160
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG  G++              
Sbjct: 1502 QGEKGAKGESGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1561

Query: 161  -------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                         GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1562 LGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1614


>gi|114608071|ref|XP_001136406.1| PREDICTED: collagen alpha-1(IX) chain isoform 1 [Pan troglodytes]
          Length = 921

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 105/208 (50%), Gaps = 48/208 (23%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEFGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGI---PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+   PGD+G+R      GPKGD G  G +GIPG  G    KGD G P 
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGVEGARGIPGLPGS---KGDTGLP- 540

Query: 192 RIGLDGRDGLPGEP------------------GLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             G+DGRDG+PG P                  GL G+PG  G  G+ G+ G  G  G PG
Sbjct: 541 --GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSAGAPGKPG 598

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G +G+ G  GP G  G  G  G+PG+
Sbjct: 599 QMGNSGKPGQQGPPGEVGPRGPQGLPGS 626



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 75/140 (53%), Gaps = 6/140 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEFGEVGAQGPPGAQGLRGITGIV 477

Query: 185 GDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GD G  G  GLDG     GLPG PG  G  G  G  G  G  G+ G  GIPG  G+ G+ 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGVEGARGIPGLPGSKGDT 537

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G+    G  G+ GI G+PGT
Sbjct: 538 GLP---GVDGRDGIPGMPGT 554



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 82/159 (51%), Gaps = 12/159 (7%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA         +GIPG  G +G  G  G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGVEGA---------RGIPGLPGSKGDTGLPG 541

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G  G
Sbjct: 542 VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSAGAPGKPGQMG 601

Query: 228 KDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G PG  G  GE G  GP+   G+RG+ G  G PG P 
Sbjct: 602 NSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 640



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGEFGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGVEGARGIPGLPG 532



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G +G  GA+G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 496 GLPGAPGDQGQRGPPGEAGPKGDRGVEGARGIPGLPGSKGDTGLPGVDGRDGIPGMPGTK 555

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG  G PG+ G  G  G PG+ G  G  
Sbjct: 556 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSAGAPGKPGQMGNSGKPGQQGPPGEV 615

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G  G+PG  G  G  G PG  G
Sbjct: 616 GPRGPQGLPGSRGELGPVGSPGLPG 640



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 88/193 (45%), Gaps = 48/193 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GPQ
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSAGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 621

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PG+                   G+ G  G+ GEPG  G  G +
Sbjct: 622 GLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 681

Query: 215 GMD------------GIPGKDGLPGKDGIPGTNGTNGEKGM------------TGPRGNR 250
           G +            G+PG  G  G  G PG  G  G +G+             G +G +
Sbjct: 682 GEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQ 741

Query: 251 GKSGINGVPGTPA 263
           G +G+ GV G P 
Sbjct: 742 GATGLPGVQGPPG 754



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 76/179 (42%), Gaps = 60/179 (33%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   +MG  G+ G++G PG VGP GPQG+PG  G+ GP G  G 
Sbjct: 579 PGAKGVAGEKGSAGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGL 638

Query: 169 PGP------------------------QGIPGDEGKRGPKG---------------DMGY 189
           PG                         +G+ G+ G +G +G               D+G 
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGL 698

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
           P   G  G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 P---GPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 38/69 (55%), Gaps = 7/69 (10%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIP-----GRNGM 216
           G  G PG +G PG  G RGPKGD+G  G  G  GR   GLPG  GL G P     GRNG 
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAVGLPGDPGPASYGRNGR 873

Query: 217 DGIPGKDGL 225
           DG  G  G+
Sbjct: 874 DGERGPPGV 882


>gi|293339632|gb|ADE44108.1| collagen type XXI alpha 1 [Sus scrofa]
          Length = 895

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 98/193 (50%), Gaps = 42/193 (21%)

Query: 110 CPPG---LQGPIG------------QKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ 151
           CPPG   LQGP G            Q G+ G  G  GV G  G  G+PG+ G    PG +
Sbjct: 446 CPPGKPGLQGPKGDPGQPGNPGYPGQPGQDGKPGYQGVAGSPGVPGSPGIQGARGLPGYR 505

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEP 205
           G PG +G++G +G  G+PG  G+PG +G+ GPKGD G PG  G  G        G PG P
Sbjct: 506 GEPGRDGEKGDRGLPGFPGLHGMPGSKGEMGPKGDKGSPGFYGKKGAKGEKGTVGFPGLP 565

Query: 206 GLDGIPGRNGMDGI---------------PGKDGL---PGKDGIPGTNGTNGEKGMTGPR 247
           G  G PGR+G DG+               PG+DGL   PG  G PG  G  G+KG  GP 
Sbjct: 566 GRAGEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGLRGEPGIPGFPGNQGLMGQKGEIGPP 625

Query: 248 GNRGKSGINGVPG 260
           G  GK G  G+PG
Sbjct: 626 GPLGKKGAPGIPG 638



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 105/213 (49%), Gaps = 27/213 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG---------------------EKGAPGVVGPPGP 150
           PG QG +GQKGEIG  G +G KG  G                      KG PG+ G PG 
Sbjct: 610 PGNQGLMGQKGEIGPPGPLGKKGAPGIPGLMGSDGPPGQPGTPGPKGNKGEPGLQGLPGA 669

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+ G+ G  GP G+ GY G  GI G +G +G +G+ G  G+ G +GR G+PG+ G+ G 
Sbjct: 670 SGLKGEPGAVGPPGEPGYLGLPGIQGKKGDKGNQGEKGIQGQKGENGRPGIPGQQGIQGH 729

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGTPAI 264
           PG  G  G  G+ G  G  G  G +G +G  G  GP+G  G++      G++G PG    
Sbjct: 730 PGAKGERGEKGEPGARGATGPKGESGVDGVMGPAGPQGQPGETGPQGPPGLDGKPGREFS 789

Query: 265 CAYKRESCSLLPNSETSQLLIPPTIVGSEHIFS 297
             + R+ C+ +  ++   LL    I   +H  S
Sbjct: 790 EQFIRQVCTDVLRAQLPALLQSGRIQSCDHCQS 822



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 89/164 (54%), Gaps = 18/164 (10%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           +G  G  G  GE G  G+ G  G+PG  G  GP G PG +G RG  G  G+PG QG+ G 
Sbjct: 559 VGFPGLPGRAGEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGLRGEPGIPGFPGNQGLMGQ 618

Query: 178 EGKRGPKGDMG---YPGRIGLDGRDGLP------------GEPGLDGIPGRNGMDGIPGK 222
           +G+ GP G +G    PG  GL G DG P            GEPGL G+PG +G+ G PG 
Sbjct: 619 KGEIGPPGPLGKKGAPGIPGLMGSDGPPGQPGTPGPKGNKGEPGLQGLPGASGLKGEPGA 678

Query: 223 DGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G PG+    G+PG  G  G+KG  G +G +G+ G NG PG P 
Sbjct: 679 VGPPGEPGYLGLPGIQGKKGDKGNQGEKGIQGQKGENGRPGIPG 722



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 76/161 (47%), Gaps = 27/161 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G +G KG PG  G PG  G PG +GK G +G  G PG  G PG +G RG  G  G P
Sbjct: 449 GKPGLQGPKGDPGQPGNPGYPGQPGQDGKPGYQGVAGSPGVPGSPGIQGARGLPGYRGEP 508

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRN---------------------------GMDGIPGKD 223
           GR G  G  GLPG PGL G+PG                             G  G+PG+ 
Sbjct: 509 GRDGEKGDRGLPGFPGLHGMPGSKGEMGPKGDKGSPGFYGKKGAKGEKGTVGFPGLPGRA 568

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG+ G  G  G+ G KG  GP G  G+ G+ G PG P  
Sbjct: 569 GEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGLRGEPGIPGF 609



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 95/221 (42%), Gaps = 66/221 (29%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   S      PG+QG    +G  G +GE G  GE+G++G PG    PG  G+PG +G+
Sbjct: 481 QGVAGSPGVPGSPGIQG---ARGLPGYRGEPGRDGEKGDRGLPGF---PGLHGMPGSKGE 534

Query: 160 RGPKGD------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIG------L 195
            GPKGD                  +G+PG  G  G+ G+ G  G MG PG  G       
Sbjct: 535 MGPKGDKGSPGFYGKKGAKGEKGTVGFPGLPGRAGEPGRHGKDGLMGSPGYKGEAGPPGA 594

Query: 196 DGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGL--------------- 225
            G+DGL GEPG+ G PG  G+                G PG  GL               
Sbjct: 595 PGQDGLRGEPGIPGFPGNQGLMGQKGEIGPPGPLGKKGAPGIPGLMGSDGPPGQPGTPGP 654

Query: 226 ------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                 PG  G+PG +G  GE G  GP G  G  G+ G+ G
Sbjct: 655 KGNKGEPGLQGLPGASGLKGEPGAVGPPGEPGYLGLPGIQG 695


>gi|410929373|ref|XP_003978074.1| PREDICTED: collagen alpha-1(IX) chain-like [Takifugu rubripes]
          Length = 674

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/186 (44%), Positives = 102/186 (54%), Gaps = 20/186 (10%)

Query: 102 FCNSTKEYCP--PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGI--- 153
            C+S +   P  PG++G  G KGE G  G  G KGE GE+G  GVVG    PGP G+   
Sbjct: 160 ACSSGRTGHPGLPGMKGHKGVKGESGEPGRQGHKGEEGEQGPLGVVGAQGLPGPGGVRGF 219

Query: 154 ------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGL 201
                  GD G RG  GD+G  G QG+PGD G+RGP G+ G PG        G+ G  G 
Sbjct: 220 PGIMGSKGDRGPRGTPGDIGPRGIQGVPGDMGQRGPTGEPGIPGAQGDRGPPGIRGAPGA 279

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+PGL G  GR G+ G+PG  GLPGK G PG  G+ G  G+ G  G +G SG+ GV G 
Sbjct: 280 KGDPGLPGPDGREGIPGLPGSKGLPGKSGAPGDAGSQGLPGLPGAYGQKGISGVKGVAGD 339

Query: 262 PAICAY 267
           P +   
Sbjct: 340 PGVVGL 345



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 95/226 (42%), Gaps = 39/226 (17%)

Query: 72  REKEQQNSTHNNPWVWLNAYSRIPLVAMQGF---CNSTKEYCPPGLQGPIGQKGEIGAKG 128
           R+  +       P   + A        ++GF     S  +  P G  G IG +G  G  G
Sbjct: 189 RQGHKGEEGEQGPLGVVGAQGLPGPGGVRGFPGIMGSKGDRGPRGTPGDIGPRGIQGVPG 248

Query: 129 EMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRG 182
           +MG +G  GE G PG  G   PPG +G PG       KGD G PGP   +GIPG  G +G
Sbjct: 249 DMGQRGPTGEPGIPGAQGDRGPPGIRGAPGA------KGDPGLPGPDGREGIPGLPGSKG 302

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             G  G PG  G  G  GLPG  G  GI G  G+ G PG  GL   DG PG  G  GE+G
Sbjct: 303 LPGKSGAPGDAGSQGLPGLPGAYGQKGISGVKGVAGDPGVVGL---DGSPGKQGERGEQG 359

Query: 243 MT---------------------GPRGNRGKSGINGVPGTPAICAY 267
                                  G  G RG  G  G+PG P    Y
Sbjct: 360 EVGPVGPRGGPGTRGPRGHDGPPGAPGARGSKGDPGLPGLPGPAGY 405



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 102/231 (44%), Gaps = 66/231 (28%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGE------IGAKGE------------MGVKGERG 137
           L  M+G      E   PG QG  G++GE      +GA+G             MG KG+RG
Sbjct: 171 LPGMKGHKGVKGESGEPGRQGHKGEEGEQGPLGVVGAQGLPGPGGVRGFPGIMGSKGDRG 230

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGP------------------------KGDMGYPGP-- 171
            +G PG +GP G QG+PGD G+RGP                        KGD G PGP  
Sbjct: 231 PRGTPGDIGPRGIQGVPGDMGQRGPTGEPGIPGAQGDRGPPGIRGAPGAKGDPGLPGPDG 290

Query: 172 ----------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                     +G+PG  G  G  G  G PG  G  G+ G+ G  G+ G PG  G+DG PG
Sbjct: 291 REGIPGLPGSKGLPGKSGAPGDAGSQGLPGLPGAYGQKGISGVKGVAGDPGVVGLDGSPG 350

Query: 222 KDGLPGKDG------------IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           K G  G+ G              G  G +G  G  G RG++G  G+ G+PG
Sbjct: 351 KQGERGEQGEVGPVGPRGGPGTRGPRGHDGPPGAPGARGSKGDPGLPGLPG 401



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 93/211 (44%), Gaps = 62/211 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QGP G +G  G +G++G +GE GEKG+          G PG+ G +GP+G  G  G
Sbjct: 420 PKGDQGPAGAEGTAGERGDVGDEGELGEKGS---------TGPPGETGNKGPEGSRGQQG 470

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG--------------------------- 203
            +G  G  G RG +GDMG PG   L GR G PG                           
Sbjct: 471 KEGKLGQPGPRGMQGDMGAPG---LSGRQGPPGKTPTDTHIKQVCMRVMQEQLAQLAASL 527

Query: 204 ---EPGLDGIP------------GRNGMDGIPGKDGLPGKDGIPGT------NGTNGEKG 242
              E G+ G+P            G NG  G  G  GLPG  G PG        G  G+KG
Sbjct: 528 SRPESGIAGLPGPPGPPGPPGPSGENGFPGHVGSRGLPGLKGPPGVLGRKGPKGDQGDKG 587

Query: 243 MTGP--RGNRGKSGINGVPGTPAICAYKRES 271
             GP  RG +G+ G  G+PG P   AY ++ 
Sbjct: 588 DRGPTERGPKGEPGAPGLPGQPGRVAYGKDG 618



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 84/182 (46%), Gaps = 30/182 (16%)

Query: 106 TKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           T E   PG QG   P G +G  GAKG+ G+ G  G +G PG+   PG +G+PG  G  G 
Sbjct: 256 TGEPGIPGAQGDRGPPGIRGAPGAKGDPGLPGPDGREGIPGL---PGSKGLPGKSGAPGD 312

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------- 208
            G  G PG  G  G +G  G KG  G PG +GLDG  G  GE G                
Sbjct: 313 AGSQGLPGLPGAYGQKGISGVKGVAGDPGVVGLDGSPGKQGERGEQGEVGPVGPRGGPGT 372

Query: 209 ----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                     G PG  G  G PG  GLPG  G  G  G  G  G+ GP+G++G +G  G 
Sbjct: 373 RGPRGHDGPPGAPGARGSKGDPGLPGLPGPAGYHGQKGDRGAVGLDGPKGDQGPAGAEGT 432

Query: 259 PG 260
            G
Sbjct: 433 AG 434



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 80/162 (49%), Gaps = 26/162 (16%)

Query: 125 GAKGEMGVKGERGEKGAP--GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           G+KGE G++G  GE G    G+ G PG  G+PG+ GK GP G  G  GP G+PG  G RG
Sbjct: 87  GSKGESGLRGPSGEPGVGTDGLDGIPGTDGLPGELGKVGPPGARGKRGPVGLPGAVGLRG 146

Query: 183 P---------------KGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD---GIPG 221
           P                G  G+PG  G+ G  G+    GEPG  G  G  G     G+ G
Sbjct: 147 PPGVYQGEELCPNACSSGRTGHPGLPGMKGHKGVKGESGEPGRQGHKGEEGEQGPLGVVG 206

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNR---GKSGINGVPG 260
             GLPG  G+ G  G  G KG  GPRG     G  GI GVPG
Sbjct: 207 AQGLPGPGGVRGFPGIMGSKGDRGPRGTPGDIGPRGIQGVPG 248



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 62/127 (48%), Gaps = 12/127 (9%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPKGDMGYPGPQGIPGDEGKR 181
           G  G  G RG KG PG+ G PGP G  G +G R      GPKGD      QG  G EG  
Sbjct: 380 GPPGAPGARGSKGDPGLPGLPGPAGYHGQKGDRGAVGLDGPKGD------QGPAGAEGTA 433

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G +GD+G  G +G  G  G PGE G  G  G  G  G  GK G PG  G+ G  G  G  
Sbjct: 434 GERGDVGDEGELGEKGSTGPPGETGNKGPEGSRGQQGKEGKLGQPGPRGMQGDMGAPGLS 493

Query: 242 GMTGPRG 248
           G  GP G
Sbjct: 494 GRQGPPG 500



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 74/171 (43%), Gaps = 41/171 (23%)

Query: 131 GVKGERGEKGAPGVVGPPGP---------------QGIPGDEGKRGPKGDMGY------- 168
           G  GE G  GAPG  G PG                +G  G+ G RGP G+ G        
Sbjct: 51  GPDGESGRDGAPGAPGIPGADGPVGPPGEPGITGLKGSKGESGLRGPSGEPGVGTDGLDG 110

Query: 169 -PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------------DG 209
            PG  G+PG+ GK GP G  G  G +GL G  GL G PG+                   G
Sbjct: 111 IPGTDGLPGELGKVGPPGARGKRGPVGLPGAVGLRGPPGVYQGEELCPNACSSGRTGHPG 170

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +PG  G  G+ G+ G PG+ G  G  G  G  G+ G +G  G  G+ G PG
Sbjct: 171 LPGMKGHKGVKGESGEPGRQGHKGEEGEQGPLGVVGAQGLPGPGGVRGFPG 221


>gi|281344878|gb|EFB20462.1| hypothetical protein PANDA_015491 [Ailuropoda melanoleuca]
          Length = 886

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/186 (46%), Positives = 105/186 (56%), Gaps = 24/186 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G                +GEKG
Sbjct: 391 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGVVGAKGEKG 450

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIG 194
           A G+ G PGPQG+PG   D+G+RGP G++G  G   PQG  G  G  G KGDMG PG   
Sbjct: 451 ARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGLPGTKGDMGLPG--- 507

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           +DGRDG+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G+ G
Sbjct: 508 VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLG 567

Query: 255 INGVPG 260
            +G PG
Sbjct: 568 NSGKPG 573



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 102/184 (55%), Gaps = 21/184 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      + G +G++G 
Sbjct: 392 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGVVGAKGEKGA 451

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQG+PG   D+G+RGP G++G  G  G  G  G+PG      +PG  G  G+
Sbjct: 452 RGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPG------LPGTKGDMGL 505

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
           PG DG   +DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  +     +
Sbjct: 506 PGVDG---RDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGK 562

Query: 280 TSQL 283
             QL
Sbjct: 563 PGQL 566



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 92/205 (44%), Gaps = 60/205 (29%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------ 166
           GL GP G  G +G +G+   KGE G  G+ G  GPPG  G+PG+ G+ GP GD       
Sbjct: 300 GLTGPDGSPGSVGPRGQ---KGEPGVPGSRGFPGPPGAAGLPGELGRVGPIGDPGRRGPP 356

Query: 167 ------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                                         GYPG   +PG  G +G KG++G PGR G  
Sbjct: 357 GPPGPPGPSGTIGFHEGDPLCPNSCPPGRSGYPG---LPGMRGHKGAKGEIGEPGRQGHK 413

Query: 197 GRDGLPGE---PGLDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTNGEK 241
           G +G  GE    G  G PG  G+ GI G             DG PG  G+PG  G  G++
Sbjct: 414 GEEGDQGELGEVGAQGPPGAQGLRGITGVVGAKGEKGARGLDGEPGPQGLPGAPGDQGQR 473

Query: 242 ---GMTGPRGNRGKSGINGVPGTPA 263
              G  GP+G+RG  G  G+PG P 
Sbjct: 474 GPPGEIGPKGDRGPQGSRGIPGLPG 498



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 77/143 (53%), Gaps = 12/143 (8%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G    QG PG +G RG  
Sbjct: 384 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGA---QGPPGAQGLRGIT 440

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTN 238
           G +G  G  G  G DG PG  GL G PG  G  G PG+       G  G  GIPG  GT 
Sbjct: 441 GVVGAKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGLPGTK 500

Query: 239 GEKGMTGPRGNRGKSGINGVPGT 261
           G+ G+    G  G+ GI G+PGT
Sbjct: 501 GDMGLP---GVDGRDGIPGMPGT 520



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 78/150 (52%), Gaps = 15/150 (10%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE+G KG+RG +G+         +GIPG  G    KGDMG
Sbjct: 457 EPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGS---------RGIPGLPGT---KGDMG 504

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 505 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPG 564

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG  G  GE G  GPRG  G  G
Sbjct: 565 QLGNSGKPGQQGPPGEVGPRGPRGLPGSRG 594



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 88/198 (44%), Gaps = 54/198 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------------------- 146
           PG  GP GQKGE G  G  G  G  G  G PG +G                         
Sbjct: 308 PGSVGPRGQKGEPGVPGSRGFPGPPGAAGLPGELGRVGPIGDPGRRGPPGPPGPPGPSGT 367

Query: 147 --------------PPGPQG---IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
                         PPG  G   +PG  G +G KG++G PG QG  G+EG +G  G++G 
Sbjct: 368 IGFHEGDPLCPNSCPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGA 427

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG------KDGIPGTNGTNGEKGM 243
            G  G  G  G+ G  G  G  G  G+DG PG  GLPG      + G PG  G  G++  
Sbjct: 428 QGPPGAQGLRGITGVVGAKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDR-- 485

Query: 244 TGPRGNRGKSGINGVPGT 261
            GP+G+R   GI G+PGT
Sbjct: 486 -GPQGSR---GIPGLPGT 499



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 68/133 (51%), Gaps = 6/133 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G +G  G++G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 462 GLPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGLPGTKGDMGLPGVDGRDGIPGMPGTK 521

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG+ G PG+ G  G  G PG+ G  G  
Sbjct: 522 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGNSGKPGQQGPPGEV 581

Query: 212 GRNGMDGIPGKDG 224
           G  G  G+PG  G
Sbjct: 582 GPRGPRGLPGSRG 594



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 49/91 (53%), Gaps = 20/91 (21%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           + G +G PG+ GPPG  G+      RGPKGD+G  G QG PG    RGPKG         
Sbjct: 778 QMGLRGLPGIKGPPGALGL------RGPKGDLGERGEQGPPG----RGPKG--------- 818

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           L G  GLPGEPG     GRNG DG  G  G+
Sbjct: 819 LPGATGLPGEPGPASY-GRNGRDGERGPPGV 848



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 66/171 (38%), Gaps = 54/171 (31%)

Query: 144 VVGPP---------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
             G P         GP G PG  G RG KG+ G PG +G PG  G  G  G++G  G IG
Sbjct: 289 APGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGPPGAAGLPGELGRVGPIG 348

Query: 195 ---------------------------------LDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                                              GR G PG PG+ G  G  G  G PG
Sbjct: 349 DPGRRGPPGPPGPPGPSGTIGFHEGDPLCPNSCPPGRSGYPGLPGMRGHKGAKGEIGEPG 408

Query: 222 KDGLPGKD------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G  G++            G PG  G  G  G+ G +G +G  G++G PG
Sbjct: 409 RQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGVVGAKGEKGARGLDGEPG 459



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 5/75 (6%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           +MG++G  G KG PG +G  GP+G  G+ G++GP G     GP+G+PG  G  G  G   
Sbjct: 778 QMGLRGLPGIKGPPGALGLRGPKGDLGERGEQGPPGR----GPKGLPGATGLPGEPGPAS 833

Query: 189 YPGRIGLDGRDGLPG 203
           Y GR G DG  G PG
Sbjct: 834 Y-GRNGRDGERGPPG 847



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 42/81 (51%), Gaps = 18/81 (22%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG +G PG  G RGPKGD+G               E G  G PGR G  G+PG  GLP
Sbjct: 783 GLPGIKGPPGALGLRGPKGDLG---------------ERGEQGPPGR-GPKGLPGATGLP 826

Query: 227 GKDGIP--GTNGTNGEKGMTG 245
           G+ G    G NG +GE+G  G
Sbjct: 827 GEPGPASYGRNGRDGERGPPG 847



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GP+
Sbjct: 534 GLQGLPGVPGIPGAKG---VAGEKGNTGAPGK---PGQLGNSGKPGQQGPPGEVGPRGPR 587

Query: 173 GIPGDEGK 180
           G+PG  G+
Sbjct: 588 GLPGSRGE 595



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 112 PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           PG +G  G+KG  GA    G++G  G+ G++G PG VGP GP+G+PG  G+
Sbjct: 545 PGAKGVAGEKGNTGAPGKPGQLGNSGKPGQQGPPGEVGPRGPRGLPGSRGE 595


>gi|397476410|ref|XP_003809596.1| PREDICTED: collagen alpha-1(IX) chain isoform 1 [Pan paniscus]
          Length = 921

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 105/208 (50%), Gaps = 48/208 (23%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEFGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+RGP      KGD G  G +GIPG  G    KGD G PG
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGS---KGDTGLPG 541

Query: 192 RIGLDGRDGLPGEP------------------GLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
              +DGRDG+PG P                  GL G+PG  G  G+ G+ G  G  G PG
Sbjct: 542 ---VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSAGAPGKPG 598

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G +G+ G  GP G  G  G  G+PG+
Sbjct: 599 QMGNSGKPGQQGPPGEVGPRGPRGLPGS 626



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 82/159 (51%), Gaps = 12/159 (7%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA         +GIPG  G +G  G  G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGA---------RGIPGLPGSKGDTGLPG 541

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G  G
Sbjct: 542 VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSAGAPGKPGQMG 601

Query: 228 KDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 602 NSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPG 640



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 74/140 (52%), Gaps = 6/140 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEFGEVGAQGPPGAQGLRGITGIV 477

Query: 185 GDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GD G  G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G+ G+ 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGSKGDT 537

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G+    G  G+ GI G+PGT
Sbjct: 538 GLP---GVDGRDGIPGMPGT 554



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGEFGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 532



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G +G  GA+G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 496 GLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGSKGDTGLPGVDGRDGIPGMPGTK 555

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG  G PG+ G  G  G PG+ G  G  
Sbjct: 556 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSAGAPGKPGQMGNSGKPGQQGPPGEV 615

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G  G+PG  G  G  G PG  G
Sbjct: 616 GPRGPRGLPGSRGELGPVGSPGLPG 640



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 88/193 (45%), Gaps = 48/193 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GP+
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSAGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPR 621

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PG+                   G+ G  G+ GEPG  G  G +
Sbjct: 622 GLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 681

Query: 215 GMD------------GIPGKDGLPGKDGIPGTNGTNGEKGM------------TGPRGNR 250
           G +            G+PG  G  G  G PG  G  G +G+             G +G +
Sbjct: 682 GEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQ 741

Query: 251 GKSGINGVPGTPA 263
           G +G+ GV G P 
Sbjct: 742 GATGLPGVQGPPG 754



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 76/179 (42%), Gaps = 60/179 (33%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   +MG  G+ G++G PG VGP GP+G+PG  G+ GP G  G 
Sbjct: 579 PGAKGVAGEKGSAGAPGKPGQMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGL 638

Query: 169 PGP------------------------QGIPGDEGKRGPKG---------------DMGY 189
           PG                         +G+ G+ G +G +G               D+G 
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGL 698

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
           P   G  G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 P---GPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 38/69 (55%), Gaps = 7/69 (10%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIP-----GRNGM 216
           G  G PG +G PG  G RGPKGD+G  G  G  GR   GLPG  GL G P     GRNG 
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAIGLPGDPGPASYGRNGQ 873

Query: 217 DGIPGKDGL 225
           DG  G  G+
Sbjct: 874 DGERGPPGV 882


>gi|344264178|ref|XP_003404170.1| PREDICTED: collagen alpha-1(IX) chain [Loxodonta africana]
          Length = 921

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 105/208 (50%), Gaps = 48/208 (23%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEPGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKR------GPKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+RGP G+    GP+G  G +G R      GPKGD G P 
Sbjct: 485 ARGLDGDPGPQGLPGAPGDQGRRGPPGEA---GPKGERGAQGSRGIPGLPGPKGDTGLP- 540

Query: 192 RIGLDGRDGLPGEP------------------GLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             G+DG DG+PG P                  GL G+PG  G  GI G+ G  G  G PG
Sbjct: 541 --GVDGHDGIPGMPGTKGEPGKPGPPGDPGLQGLPGVPGIPGAKGIAGEKGNTGAPGKPG 598

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G +G+ G  GP G  G  G  G+PG+
Sbjct: 599 QLGNSGKPGHQGPPGEVGPRGPRGIPGS 626



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 89/190 (46%), Gaps = 54/190 (28%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQ------------------------------GIP 154
           G  G  G+ G RG KGA G +G PG Q                              GI 
Sbjct: 418 GHSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEPGEVGAQGPPGAQGLRGITGIV 477

Query: 155 GDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--- 208
           GD+G++G +G  G PGPQG+   PGD+G+RGP G+ G  G  G  G  G+PG PG     
Sbjct: 478 GDKGEKGARGLDGDPGPQGLPGAPGDQGRRGPPGEAGPKGERGAQGSRGIPGLPGPKGDT 537

Query: 209 GIPGRNGMDGIPGK------------------DGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G+PG +G DGIPG                    GLPG  GIPG  G  GEKG TG  G  
Sbjct: 538 GLPGVDGHDGIPGMPGTKGEPGKPGPPGDPGLQGLPGVPGIPGAKGIAGEKGNTGAPGKP 597

Query: 251 GKSGINGVPG 260
           G+ G +G PG
Sbjct: 598 GQLGNSGKPG 607



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G PG +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGEPGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G +   G  GP+G RG  G  G+PG P 
Sbjct: 478 GDKGEKGARGLDGDPGPQGLPGAPGDQGRRGPPGEAGPKGERGAQGSRGIPGLPG 532



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 75/148 (50%), Gaps = 15/148 (10%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP- 169
           P GL G  G +G  G  GE G KGERG +G+ G+ G P            GPKGD G P 
Sbjct: 494 PQGLPGAPGDQGRRGPPGEAGPKGERGAQGSRGIPGLP------------GPKGDTGLPG 541

Query: 170 --GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G  GIPG  G +G  G  G PG  GL G  G+PG PG  GI G  G  G PGK G  G
Sbjct: 542 VDGHDGIPGMPGTKGEPGKPGPPGDPGLQGLPGVPGIPGAKGIAGEKGNTGAPGKPGQLG 601

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G PG  G  GE G  GPRG  G  G+
Sbjct: 602 NSGKPGHQGPPGEVGPRGPRGIPGSRGV 629



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 45/82 (54%), Gaps = 20/82 (24%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           G +G PG+ GPPG  G+      +GPKGD+G  G +G PG    RGPKG         L 
Sbjct: 814 GLRGLPGIKGPPGALGL------KGPKGDLGEKGERGPPG----RGPKG---------LP 854

Query: 197 GRDGLPGEPGLDGIPGRNGMDG 218
           G  GLPG+PG     GRNG DG
Sbjct: 855 GATGLPGDPGPASY-GRNGRDG 875


>gi|345324770|ref|XP_001506111.2| PREDICTED: collagen alpha-1(VII) chain [Ornithorhynchus anatinus]
          Length = 2697

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/151 (46%), Positives = 85/151 (56%), Gaps = 3/151 (1%)

Query: 113  GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            G++G +G KG     GA+G MG KGE GE G PG  G PG  G+PG  G +G  G +G  
Sbjct: 2191 GVKGELGDKGSGGFPGARGPMGQKGEAGELGNPGEPGMPGKDGVPGVRGDKGEMGFLGLR 2250

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP+G  G +G  G  G+ G  G  GL GR GLPG  G  G  G  G  G+PGK+GL G  
Sbjct: 2251 GPKGERGTKGACGQDGEKGNKGDTGLHGRPGLPGRKGEPGELGAPGTSGLPGKEGLIGPK 2310

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G +G  G KG  G +G RG  G+ G PG
Sbjct: 2311 GDRGFDGQQGAKGDHGEKGERGLPGVGGFPG 2341



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 100/213 (46%), Gaps = 49/213 (23%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
             S  E  PPG   P G+ G  G +G+ G  G+ GEKG PG VGPPG  G+ G EG+ G K
Sbjct: 1395 GSKGERGPPGFGIP-GEPGSKGEQGDRGDPGQPGEKGEPGRVGPPGLTGLRGKEGEPGEK 1453

Query: 164  GDMGYPGPQGIPGDEGKRGP------------KGDMGYPGR------------------- 192
            GD G PG  G+PG  G+RGP            KG++G PG                    
Sbjct: 1454 GDEGTPGELGLPGKPGERGPRGLPGPRGIPGEKGNLGDPGEDGQNGSPGAAGSKGDRGDP 1513

Query: 193  --------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                           GLDG  G  G+PGL GIPG  G +G+    GLPG  G  G  G  
Sbjct: 1514 GPPGPPGRLGEPGSSGLDGARGPKGDPGLPGIPGERGSEGL---RGLPGSRGDSGERGPA 1570

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G+KG  GP G  G++G++G PG       + E+
Sbjct: 1571 GDKGDRGPPGLDGRNGLDGKPGALGPAGSRGEA 1603



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 88/163 (53%), Gaps = 12/163 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP+GQKGE G  G  G  G  G+ G PGV G  G  G     G RGPKG+ G    
Sbjct: 2205 PGARGPMGQKGEAGELGNPGEPGMPGKDGVPGVRGDKGEMGF---LGLRGPKGERGT--- 2258

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGK 228
            +G  G +G++G KGD G  GR GL GR G PGE   PG  G+PG+ G+ G  G  G  G+
Sbjct: 2259 KGACGQDGEKGNKGDTGLHGRPGLPGRKGEPGELGAPGTSGLPGKEGLIGPKGDRGFDGQ 2318

Query: 229  DGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPAICAYK 268
             G  G +G  GE+G+ G     G RG  G  G PG P I   K
Sbjct: 2319 QGAKGDHGEKGERGLPGVGGFPGPRGNDGTVGSPGPPGIVGPK 2361



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 20/166 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGPPGPQGI------PGDEGKR 160
            GL+GP G++G  GA G+ G KG +G+ G       PG  G PG  G       PG EG  
Sbjct: 2248 GLRGPKGERGTKGACGQDGEKGNKGDTGLHGRPGLPGRKGEPGELGAPGTSGLPGKEGLI 2307

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPK---GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            GPKGD G+ G QG  GD G++G +   G  G+PG  G DG  G PG PG+ G  G  G+ 
Sbjct: 2308 GPKGDRGFDGQQGAKGDHGEKGERGLPGVGGFPGPRGNDGTVGSPGPPGIVGPKGPEGIQ 2367

Query: 218  GIPGKDGLPGKD-----GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G+ G PG+      G PG  G  GE+G  GP G+RG+ G  G+
Sbjct: 2368 GQKGERGPPGEAVVGVRGAPGIPGERGEQGNPGPGGSRGEKGEPGM 2413



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 95/205 (46%), Gaps = 61/205 (29%)

Query: 111  PPGLQGPIGQKGEIGA-------------------------------------------- 126
            PPG +G  G KG+IGA                                            
Sbjct: 2125 PPGNRGERGDKGDIGAIGLKGDKGDTVLVDGPVGARGSKGEPGDRGLKGSDGGKGDKGDV 2184

Query: 127  --KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP---GDEGK- 180
               GE GVKGE G+KG+ G  G  GP G  G+ G+ G  G+ G PG  G+P   GD+G+ 
Sbjct: 2185 GLPGEKGVKGELGDKGSGGFPGARGPMGQKGEAGELGNPGEPGMPGKDGVPGVRGDKGEM 2244

Query: 181  -----RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                 RGPKG+ G  G  G DG  G  G+ GL G P      G+PG+ G PG+ G PGT+
Sbjct: 2245 GFLGLRGPKGERGTKGACGQDGEKGNKGDTGLHGRP------GLPGRKGEPGELGAPGTS 2298

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G++G+ GP+G+RG  G  G  G
Sbjct: 2299 GLPGKEGLIGPKGDRGFDGQQGAKG 2323



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 97/212 (45%), Gaps = 47/212 (22%)

Query: 85   WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG--------EMGVKGER 136
            W + N Y  +P V+              G  GP G +GE GAKG        E G KG+R
Sbjct: 1732 WYFPNMYVGVPGVS--------------GNPGPKGDRGESGAKGICESRSWGEPGAKGDR 1777

Query: 137  GE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            GE   KG  G +GP G +G+ G EGK G +GD G  G  G+ G  G +GP G  G  G  
Sbjct: 1778 GEAGEKGRDGSLGPTGERGLAGPEGKPGNQGDPGPAGSPGLAGPPGVQGPSGIKGEQGEP 1837

Query: 194  GLDGRDGLP---------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  GR GLP                     G PGL G  G  G  G+PG+DG+ GKDG  
Sbjct: 1838 GPSGR-GLPGPPGSVGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGVPGRDGVTGKDGEA 1896

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G  G  GP G +G+ G  G PG   +
Sbjct: 1897 GPPGIMGTPGPAGPVGPKGEPGAVGPPGQAVV 1928



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 76/151 (50%), Gaps = 26/151 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G +G+ G+ G  G  GV G+ GE G PG++G PGP       G  GPKG+ G  GP
Sbjct: 1869 PGLPGQVGETGKPGVPGRDGVTGKDGEAGPPGIMGTPGPA------GPVGPKGEPGAVGP 1922

Query: 172  Q-----GIPGDEGKR--------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                  G+PG +G++              G KGD G PG  G  G  G  GEPG  G  G
Sbjct: 1923 PGQAVVGVPGIKGEKGAPGGFIGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDG 1982

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            R G  GI G  G  G  G+PG+ G NG  GM
Sbjct: 1983 RKGASGIKGDKGSTGI-GLPGSIGPNGPPGM 2012



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 97/219 (44%), Gaps = 49/219 (22%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------------E 135
            V   G      E   PGL+GP+G  G+ G KGE G +G                     E
Sbjct: 1291 VGEPGLPGLPGEQGSPGLRGPVGPPGQKGDKGE-GEEGFPGPPGRPGDPGDRGPRGPPGE 1349

Query: 136  RGEKGAPGVVGPP---------------GPQGIPGDEGKR-----GPKGDMGYPGPQGIP 175
             G KG PG  G P               G +G    +G R     G KG+ G PG  GIP
Sbjct: 1350 VGSKGEPGAAGRPGTEGGEGPPGPAGRRGEKGSQDRKGHREKTNPGSKGERGPPG-FGIP 1408

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGLPGKD 229
            G+ G +G +GD G PG+ G  G  G  G PGL G+      PG  G +G PG+ GLPGK 
Sbjct: 1409 GEPGSKGEQGDRGDPGQPGEKGEPGRVGPPGLTGLRGKEGEPGEKGDEGTPGELGLPGKP 1468

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G  G +G+ G +GN G  G +G  G+P     K
Sbjct: 1469 GERGPRGLPGPRGIPGEKGNLGDPGEDGQNGSPGAAGSK 1507



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 69/123 (56%), Gaps = 19/123 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQG------IPGDEGKRGP 162
            PG +G IG KG+ G  G+ G KG   E+GE+G PGV G PGP+G       PG  G  GP
Sbjct: 2301 PGKEGLIGPKGDRGFDGQQGAKGDHGEKGERGLPGVGGFPGPRGNDGTVGSPGPPGIVGP 2360

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            K      GP+GI G +G+RGP G+      +G+ G  G+PGE G  G PG  G  G  G+
Sbjct: 2361 K------GPEGIQGQKGERGPPGEA----VVGVRGAPGIPGERGEQGNPGPGGSRGEKGE 2410

Query: 223  DGL 225
             G+
Sbjct: 2411 PGM 2413



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 94/215 (43%), Gaps = 70/215 (32%)

Query: 112  PGLQGPIGQKGEIGAKGE-----MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PG  GP+G KGE GA G      +GV G +GEKGAPG     +VG PG +G  G  G RG
Sbjct: 1905 PGPAGPVGPKGEPGAVGPPGQAVVGVPGIKGEKGAPGGFIGDLVGEPGAKGDRGLPGPRG 1964

Query: 162  PKGDMGYPGPQGIPGDEGKRGP---KGD-----MGYPGRIGLDGRDGL------------ 201
             KG+ G  G  G PG++G++G    KGD     +G PG IG +G  G+            
Sbjct: 1965 EKGEAGRAGEPGDPGEDGRKGASGIKGDKGSTGIGLPGSIGPNGPPGMKGELGLPGPPGL 2024

Query: 202  ---------PGEPG------------------LDGIPGRNG------------MDGIPGK 222
                     PG PG                  L G PGR G              GI G 
Sbjct: 2025 PGLPGPVGTPGHPGTRGENGQPGPPGPSGERGLIGNPGREGSLGPPGPPGPPGSMGISGL 2084

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G+ G  G  GE+G  GPRG  G+ G+ G
Sbjct: 2085 KGDKGDSGV-GQPGARGERGDPGPRGEDGRPGLEG 2118



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 78/147 (53%), Gaps = 16/147 (10%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD---- 177
            G+ GA+GE G  G RGE G PG+ G  GP G PG+ G+RG KGD+G  G +G  GD    
Sbjct: 2094 GQPGARGERGDPGPRGEDGRPGLEGDRGPAGPPGNRGERGDKGDIGAIGLKGDKGDTVLV 2153

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            +G  G +G  G PG  GL G DG  G+ G  G+PG  G+ G  G              G+
Sbjct: 2154 DGPVGARGSKGEPGDRGLKGSDGGKGDKGDVGLPGEKGVKGELGD------------KGS 2201

Query: 238  NGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  GP G +G++G  G PG P +
Sbjct: 2202 GGFPGARGPMGQKGEAGELGNPGEPGM 2228



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 58/106 (54%), Gaps = 18/106 (16%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G +G +G+ G PG+             G+RG +G  G PG +   GD G+RGP GD G  
Sbjct: 1532 GARGPKGDPGLPGI------------PGERGSEGLRGLPGSR---GDSGERGPAGDKGDR 1576

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
            G  GLDGR+GL G+PG  G  G  G     GK G PG+DG+PG  G
Sbjct: 1577 GPPGLDGRNGLDGKPGALGPAGSRGEA---GKQGDPGRDGLPGLRG 1619



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 82/178 (46%), Gaps = 38/178 (21%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---------MGYPGP 171
            +GE G  GE G KG++GE GAPG  G  GP+G  GD G +GP+G          +G PG 
Sbjct: 1664 QGEAGDPGEDGRKGDKGEAGAPGRDGREGPKGDRGDSGAQGPQGPPGLPGLPGQVGPPGQ 1723

Query: 172  QGI---------------PGDEGKRGPKGDMGYPGRIGL-----------DGRDGLPGEP 205
             GI               PG  G  GPKGD G  G  G+            G  G  GE 
Sbjct: 1724 VGIPKTGAWYFPNMYVGVPGVSGNPGPKGDRGESGAKGICESRSWGEPGAKGDRGEAGEK 1783

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G DG  G  G  G+ G +G PG  G PG  G+    G+ GP G +G SGI G  G P 
Sbjct: 1784 GRDGSLGPTGERGLAGPEGKPGNQGDPGPAGS---PGLAGPPGVQGPSGIKGEQGEPG 1838



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 78/191 (40%), Gaps = 49/191 (25%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI--PGDEGKRGPKG------ 164
            GL GP G+KGE G  GE G  GE G KGA G+ G  G  GI  PG  G  GP G      
Sbjct: 1958 GLPGPRGEKGEAGRAGEPGDPGEDGRKGASGIKGDKGSTGIGLPGSIGPNGPPGMKGELG 2017

Query: 165  ---------------DMGYPGPQ------------------GIPGDEGK------RGPKG 185
                             G+PG +                  G PG EG        GP G
Sbjct: 2018 LPGPPGLPGLPGPVGTPGHPGTRGENGQPGPPGPSGERGLIGNPGREGSLGPPGPPGPPG 2077

Query: 186  DMGYPGRIGLDGRDGL--PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             MG  G  G  G  G+  PG  G  G PG  G DG PG +G  G  G PG  G  G+KG 
Sbjct: 2078 SMGISGLKGDKGDSGVGQPGARGERGDPGPRGEDGRPGLEGDRGPAGPPGNRGERGDKGD 2137

Query: 244  TGPRGNRGKSG 254
             G  G +G  G
Sbjct: 2138 IGAIGLKGDKG 2148



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 93/199 (46%), Gaps = 43/199 (21%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            +G      +  PPGL G  G  G+ GA G  G +GE G++G PG  G PG   + G++ K
Sbjct: 1567 RGPAGDKGDRGPPGLDGRNGLDGKPGALGPAGSRGEAGKQGDPGRDGLPG---LRGEQEK 1623

Query: 160  --------RGPKGDMG----------------------YP-GPQGIPGDEGKRGPKGDMG 188
                      P   +G                      YP G  G PG++G++G KG+ G
Sbjct: 1624 MYTYIYKPHAPSRPVGGLCSWAAEVGPDEINSLFDYDFYPQGEAGDPGEDGRKGDKGEAG 1683

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---------GTNG 239
             PGR G +G  G  G+ G  G  G  G+ G+PG+ G PG+ GIP T          G  G
Sbjct: 1684 APGRDGREGPKGDRGDSGAQGPQGPPGLPGLPGQVGPPGQVGIPKTGAWYFPNMYVGVPG 1743

Query: 240  EKGMTGPRGNRGKSGINGV 258
              G  GP+G+RG+SG  G+
Sbjct: 1744 VSGNPGPKGDRGESGAKGI 1762



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 36/59 (61%), Gaps = 2/59 (3%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGER--GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            PPG+ GP G +G  G KGE G  GE   G +GAPG+ G  G QG PG  G RG KG+ G
Sbjct: 2354 PPGIVGPKGPEGIQGQKGERGPPGEAVVGVRGAPGIPGERGEQGNPGPGGSRGEKGEPG 2412


>gi|327261153|ref|XP_003215396.1| PREDICTED: collagen alpha-1(IV) chain-like [Anolis carolinensis]
          Length = 1678

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/152 (48%), Positives = 90/152 (59%), Gaps = 7/152 (4%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G +G+ G+ G+RG  G PG  G PG  G PG  G+ GPKGD G PG QG PG  
Sbjct: 957  GQKGDQGDRGQPGLSGQRGTPGDPGTPGMPGKDGDPGLPGEAGPKGDAGSPGYQGEPGLP 1016

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G +G  G+MG PG+ G  G  GLPGE G  GIPG  G+ G  G+ G PG  G PG  G  
Sbjct: 1017 GHKGSIGEMGLPGQSGEKGVQGLPGEAGRPGIPGEKGLKGEKGQAGFPGI-GFPGAPGDK 1075

Query: 239  GEKGMTGP------RGNRGKSGINGVPGTPAI 264
            G+ G TG       +G +G  GI G+PG+P I
Sbjct: 1076 GDPGRTGSPGFPGEKGEKGALGIAGIPGSPGI 1107



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 90/169 (53%), Gaps = 20/169 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG QG  G  G  G+ GEMG+ G+ GEKG  G+ G  G  GIPG++G +G KG  G+PG 
Sbjct: 1007 PGYQGEPGLPGHKGSIGEMGLPGQSGEKGVQGLPGEAGRPGIPGEKGLKGEKGQAGFPGI 1066

Query: 171  ----------------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                              G PG++G++G  G  G PG  G+ G+ G PG PG  G PG  
Sbjct: 1067 GFPGAPGDKGDPGRTGSPGFPGEKGEKGALGIAGIPGSPGIKGQPGFPGSPGAPGSPGEK 1126

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G PG  G PG  G  G  G+ G  G+    G RG++G +G+PG+P 
Sbjct: 1127 GEQGFPGVPGFPGSKGQKGDPGSQGAAGLP---GERGEAGYDGIPGSPG 1172



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 81/150 (54%), Gaps = 8/150 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G  G+ G  GV G  G KGA G +G  G +G PG  G  GP+G+ G+PGP
Sbjct: 555 PGFPGIEGVPGRDGSPGRDGVPGAPGPKGASGTIGLKGDRGPPGISGFPGPRGERGFPGP 614

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN-GMDGIPGKDGLPGKDG 230
           QG+    G  GP GD G    IG+ G  G PG PG  G  GR   + G PG DGLPG  G
Sbjct: 615 QGV----GPSGPPGDKG---DIGISGSPGTPGLPGPKGEAGRIISLPGTPGADGLPGPPG 667

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           I G  G  G+ G TG  G  G+ G+ G PG
Sbjct: 668 IQGIQGDKGDPGTTGRPGQPGEKGLTGPPG 697



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 83/170 (48%), Gaps = 31/170 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGA---------PGVVGPPGPQGIPGDEGKRGPK 163
            G  G  G KG+ G  G  G  GE+GEKGA         PG+ G PG  G PG  G  G K
Sbjct: 1067 GFPGAPGDKGDPGRTGSPGFPGEKGEKGALGIAGIPGSPGIKGQPGFPGSPGAPGSPGEK 1126

Query: 164  GDMGYPGPQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+ G+PG  G PG +G++G    +G  G PG  G  G DG+PG PG              
Sbjct: 1127 GEQGFPGVPGFPGSKGQKGDPGSQGAAGLPGERGEAGYDGIPGSPGPK------------ 1174

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G  G PG+ G+PG  G  G+      RG +G  G  G PG+P I  +K E
Sbjct: 1175 GDSGPPGR-GLPGLPGAKGD------RGAKGDVGFPGAPGSPGIPGFKGE 1217



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 91/175 (52%), Gaps = 21/175 (12%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD----EGKRGPKGDM 187
            KG +G++G+PG        GIPG +G  G  G +G PG +G PGD       +G KG+ 
Sbjct: 502 AKGAKGDRGSPGF------DGIPGVKGSPGIPGLIGSPGAKGEPGDVFFDSNLKGEKGNP 555

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G+PG  G+ GRDG PG  G+ G PG  G  G  G  G  G  GI G  G  GE+G  GP+
Sbjct: 556 GFPGIEGVPGRDGSPGRDGVPGAPGPKGASGTIGLKGDRGPPGISGFPGPRGERGFPGPQ 615

Query: 248 --------GNRGKSGINGVPGTPAICAYKRESCSL--LPNSETSQLLI-PPTIVG 291
                   G++G  GI+G PGTP +   K E+  +  LP +  +  L  PP I G
Sbjct: 616 GVGPSGPPGDKGDIGISGSPGTPGLPGPKGEAGRIISLPGTPGADGLPGPPGIQG 670



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 99/221 (44%), Gaps = 62/221 (28%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPG- 149
           ++++ G   +     PPG+QG  G KG+ G  G  G  GE+G  G PG+      GP G 
Sbjct: 650 IISLPGTPGADGLPGPPGIQGIQGDKGDPGTTGRPGQPGEKGLTGPPGIGFPGLPGPKGF 709

Query: 150 -----------------PQGIPGDEGKRGPKGD--MGYPGPQGIPGDEGKRGPKGDMGYP 190
                            PQG+PG  G  G KG+  +G PGP+G+PG      P+G  G P
Sbjct: 710 AGQPGPPGLPGEKGDTGPQGLPGISGLPGQKGEPGLGLPGPKGLPG------PQGQHGLP 763

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG----------------------- 227
           G  G  G  G PGE G  G+PG+ G+ G PG  GLPG                       
Sbjct: 764 GAKGDKGSPGQPGEKGFPGLPGQPGLQGDPGGAGLPGLQGSPGVPGIGPPGPPGPLGPMG 823

Query: 228 KDGIPGTNGTNGEKG--------MTGPRGNRGKSGINGVPG 260
             G  G +G  GE+G        M GP+G +G  G+ G+PG
Sbjct: 824 PPGAKGASGIKGERGYPGVPGLDMPGPQGEKGAPGLPGLPG 864



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 78/183 (42%), Positives = 87/183 (47%), Gaps = 43/183 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMG------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG  GP G  G IG KG+ G        G RGE+G       PGPQG+    G  GP GD
Sbjct: 576 PGAPGPKGASGTIGLKGDRGPPGISGFPGPRGERGF------PGPQGV----GPSGPPGD 625

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRI----GLDGRDGLPGEPGLDGI------PGRNG 215
            G  G  G PG  G  GPKG+    GRI    G  G DGLPG PG+ GI      PG  G
Sbjct: 626 KGDIGISGSPGTPGLPGPKGEA---GRIISLPGTPGADGLPGPPGIQGIQGDKGDPGTTG 682

Query: 216 MDGIPGKDGLPGKDGI--PGTNGTNG------------EKGMTGPRGNRGKSGINGVPGT 261
             G PG+ GL G  GI  PG  G  G            EKG TGP+G  G SG+ G  G 
Sbjct: 683 RPGQPGEKGLTGPPGIGFPGLPGPKGFAGQPGPPGLPGEKGDTGPQGLPGISGLPGQKGE 742

Query: 262 PAI 264
           P +
Sbjct: 743 PGL 745



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 97/226 (42%), Gaps = 83/226 (36%)

Query: 126  AKGEMGVKGERG--------------EKGAPGVVGPPGPQGI---PGDEGKRG------- 161
            AKG  G+KGERG              EKGAPG+ G PG QG+   PG++G+ G       
Sbjct: 827  AKGASGIKGERGYPGVPGLDMPGPQGEKGAPGLPGLPGLQGVRGLPGEQGQEGRPGTPGI 886

Query: 162  --------------------------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR--- 192
                                       KGD G+PG  G+ GD G +G KG+ G PG+   
Sbjct: 887  KGEMGVMGTPGFQGPPGPIGSPGPSGEKGDKGFPGVSGLRGDPGLKGEKGEDGLPGKPGS 946

Query: 193  ---------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGK--------- 222
                                  GL G+ G PG+PG  G+PG++G  G+PG+         
Sbjct: 947  MDHVDMENMKGQKGDQGDRGQPGLSGQRGTPGDPGTPGMPGKDGDPGLPGEAGPKGDAGS 1006

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G+ G+PG  G+ GE G+ G  G +G  G+ G  G P I   K
Sbjct: 1007 PGYQGEPGLPGHKGSIGEMGLPGQSGEKGVQGLPGEAGRPGIPGEK 1052



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 87/201 (43%), Gaps = 54/201 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG------------------ERGEKGAPGVVGPPGPQGI 153
            PG QG  G+ G  G KGEMGV G                  E+G+KG PGV       G+
Sbjct: 872  PGEQGQEGRPGTPGIKGEMGVMGTPGFQGPPGPIGSPGPSGEKGDKGFPGV------SGL 925

Query: 154  PGDEGKRGPKGDMGYPGP---------------------QGIPGDEGKRGPKGDMGYPGR 192
             GD G +G KG+ G PG                      +G PG  G+RG  GD G PG 
Sbjct: 926  RGDPGLKGEKGEDGLPGKPGSMDHVDMENMKGQKGDQGDRGQPGLSGQRGTPGDPGTPGM 985

Query: 193  IGLDGRDGLPGE---------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G DG  GLPGE         PG  G PG  G  G  G+ GLPG+ G  G  G  GE G 
Sbjct: 986  PGKDGDPGLPGEAGPKGDAGSPGYQGEPGLPGHKGSIGEMGLPGQSGEKGVQGLPGEAGR 1045

Query: 244  TGPRGNRGKSGINGVPGTPAI 264
             G  G +G  G  G  G P I
Sbjct: 1046 PGIPGEKGLKGEKGQAGFPGI 1066



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 55/98 (56%), Gaps = 14/98 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  GQKG+ G++G  G+ GERGE G  G+ G PGP            KGD G PG 
Sbjct: 1135 PGFPGSKGQKGDPGSQGAAGLPGERGEAGYDGIPGSPGP------------KGDSGPPGR 1182

Query: 172  Q--GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
               G+PG +G RG KGD+G+PG  G  G  G  GEPG 
Sbjct: 1183 GLPGLPGAKGDRGAKGDVGFPGAPGSPGIPGFKGEPGF 1220



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 89/211 (42%), Gaps = 73/211 (34%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P GL GP GQ G  GAKG+ G  G+ GEKG PG+ G PG QG PG  G            
Sbjct: 750 PKGLPGPQGQHGLPGAKGDKGSPGQPGEKGFPGLPGQPGLQGDPGGAG------------ 797

Query: 171 PQGIPG--------------------------DEGKRGPKGDMGYPGRIGLD-------- 196
              +PG                           +G  G KG+ GYPG  GLD        
Sbjct: 798 ---LPGLQGSPGVPGIGPPGPPGPLGPMGPPGAKGASGIKGERGYPGVPGLDMPGPQGEK 854

Query: 197 GRDGLPGEPGLDGI---PGRNGMDGIPGKDGLPGKDGIPGTNG---------------TN 238
           G  GLPG PGL G+   PG  G +G PG  G+ G+ G+ GT G                 
Sbjct: 855 GAPGLPGLPGLQGVRGLPGEQGQEGRPGTPGIKGEMGVMGTPGFQGPPGPIGSPGPSGEK 914

Query: 239 GEKGMTGPRGNRGKSGI------NGVPGTPA 263
           G+KG  G  G RG  G+      +G+PG P 
Sbjct: 915 GDKGFPGVSGLRGDPGLKGEKGEDGLPGKPG 945



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 66/142 (46%), Gaps = 31/142 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  GQ G  G+ G  G  GE+GE+G PGV G       PG +G+   KGD G  G 
Sbjct: 1102 PGSPGIKGQPGFPGSPGAPGSPGEKGEQGFPGVPG------FPGSKGQ---KGDPGSQGA 1152

Query: 172  QGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G+PG+ G+          GPKGD G PGR             GL G+PG  G  G  G 
Sbjct: 1153 AGLPGERGEAGYDGIPGSPGPKGDSGPPGR-------------GLPGLPGAKGDRGAKGD 1199

Query: 223  DGLPGKDGIPGTNGTNGEKGMT 244
             G PG  G PG  G  GE G  
Sbjct: 1200 VGFPGAPGSPGIPGFKGEPGFA 1221



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 77/189 (40%), Gaps = 52/189 (27%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--GIPG 155
             + GF  S  +   PG QG  G  GE G  G  G+ G  G KG     GPPG    G+PG
Sbjct: 1133 GVPGFPGSKGQKGDPGSQGAAGLPGERGEAGYDGIPGSPGPKGD---SGPPGRGLPGLPG 1189

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKR--------------------------GPKGDMGY 189
             +G RG KGD+G+PG  G PG  G +                          GPKGD G 
Sbjct: 1190 AKGDRGAKGDVGFPGAPGSPGIPGFKGEPGFAGPQGPPGQPGIPGLPGRTGAGPKGDRGP 1249

Query: 190  PGRI------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             GR                   G  G  GLPG PG     GR G+ G  G  G+PG  G 
Sbjct: 1250 QGRPGLQGQPGPQGPPGAPGLSGGKGETGLPGFPGPA---GRPGLKGDQGPQGIPGNVGF 1306

Query: 232  PGTNGTNGE 240
            PG  G  G+
Sbjct: 1307 PGAAGQKGD 1315



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 66/157 (42%), Gaps = 52/157 (33%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE------ 178
            G KGE G+ G  G  G PG+ G  GPQGIP         G++G+PG  G  GD       
Sbjct: 1272 GGKGETGLPGFPGPAGRPGLKGDQGPQGIP---------GNVGFPGAAGQKGDMGPPGIP 1322

Query: 179  ------------GKRGPKGDMGY----------------------PGRIGLDGRDGLPGE 204
                        G +G +GD G+                      PG  GL G  G  G 
Sbjct: 1323 GPQGPRGPAGVLGIKGEQGDQGFAGAKGFPGPPGPPGAFTLLKGEPGLPGLTGPAGFKGA 1382

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            PGL   PG  G  G+ G  GLPG  G PG +GT G+K
Sbjct: 1383 PGL---PGTKGQQGVSGSPGLPGSPGHPGFDGTPGQK 1416


>gi|344272030|ref|XP_003407839.1| PREDICTED: collagen alpha-1(XXVII) chain [Loxodonta africana]
          Length = 1861

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 102/206 (49%), Gaps = 35/206 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGV-------------------KGERGEKGAPGVVGPPGPQGI 153
            G+ GP+G  G  G KGE G                     G+RGE G PG  G  G QGI
Sbjct: 1316 GIVGPLGPPGSKGEKGEQGDDGKAEGPPGPPGDRGPVGDPGDRGEPGDPGYPGQEGVQGI 1375

Query: 154  ---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
               PG +G+ G  G  G PGP+G  G+EG +G +G  G  GR G+ G  GLPG     G+
Sbjct: 1376 RGRPGQQGRPGHPGPQGRPGPKGSKGEEGPKGKQGKAGAAGRRGIQGLQGLPGP---RGV 1432

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             GR G +G+ G DGLPG+DG  G  G    +G+ G  GP G RG  G+ G+PG      +
Sbjct: 1433 VGRQGPEGVAGPDGLPGRDGPAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGF 1492

Query: 268  KRESCSLLPNSETSQLLIPPTIVGSE 293
            K ES   LP       L PP   G+E
Sbjct: 1493 KGESG--LPGQ-----LGPPGKRGTE 1511



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 85/152 (55%), Gaps = 12/152 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEGK 159
            PG  GP GQ+GE G  G+ G  G  G++G PGV G PG QG PG              GK
Sbjct: 1448 PGRDGPAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGK 1507

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            RG +G  G PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+
Sbjct: 1508 RGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGL 1567

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             GK+G+ G  GI G +G  G KG  G RG+ G
Sbjct: 1568 MGKEGIIGPLGILGPSGLPGPKGDKGSRGDLG 1599



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 104/211 (49%), Gaps = 17/211 (8%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP G+ G  G+KGE G KG++G+ GA G  G  G QG+PG  
Sbjct: 1371 GVQGIRGRPGQQGRPGHPGPQGRPGPKGSKGEEGPKGKQGKAGAAGRRGIQGLQGLPGPR 1430

Query: 158  GKRGPKGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G  G +G  G  GP G+PG +   G++G +GD G PG +G  G+    G PG+ G+PG  
Sbjct: 1431 GVVGRQGPEGVAGPDGLPGRDGPAGQQGEQGDDGDPGPMGPAGKR---GNPGVAGLPGAQ 1487

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            G  G  G+ GLPG+ G PG  GT G  G+    GN+G+ G  G PG      +   +   
Sbjct: 1488 GPPGFKGESGLPGQLGPPGKRGTEGGTGLP---GNQGEPGSKGQPGDSGEMGFPGMAGLF 1544

Query: 275  LPNSETSQLLI--------PPTIVGSEHIFS 297
             P      +          PP ++G E I  
Sbjct: 1545 GPKGPPGDIGFKGIQGPRGPPGLMGKEGIIG 1575



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 86/164 (52%), Gaps = 15/164 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY 168
            PG +G  G  G  G +G  G++G  G++G PG  GP   PGP+G  G+EG +G +G  G 
Sbjct: 1355 PGDRGEPGDPGYPGQEGVQGIRGRPGQQGRPGHPGPQGRPGPKGSKGEEGPKGKQGKAGA 1414

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------ 222
             G +GI G +G  GP+G +G  G  G+ G DGLPG  G  G  G  G DG PG       
Sbjct: 1415 AGRRGIQGLQGLPGPRGVVGRQGPEGVAGPDGLPGRDGPAGQQGEQGDDGDPGPMGPAGK 1474

Query: 223  ------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   GLPG  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1475 RGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPG 1518



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 102/239 (42%), Gaps = 41/239 (17%)

Query: 43   DKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGF 102
            D GD  +   P  P  E V     + IR R  +Q    H  P                G 
Sbjct: 1354 DPGDRGEPGDPGYPGQEGV-----QGIRGRPGQQGRPGHPGPQ------------GRPGP 1396

Query: 103  CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG------------EKGAPGVVGPPGP 150
              S  E  P G QG  G  G  G +G  G+ G RG              G PG  GP G 
Sbjct: 1397 KGSKGEEGPKGKQGKAGAAGRRGIQGLQGLPGPRGVVGRQGPEGVAGPDGLPGRDGPAGQ 1456

Query: 151  QGIPGDEG---------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            QG  GD+G         KRG  G  G PG QG PG +G+ G  G +G PG+ G +G  GL
Sbjct: 1457 QGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGL 1516

Query: 202  PG---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG   EPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G
Sbjct: 1517 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIG 1575



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 81/165 (49%), Gaps = 27/165 (16%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            +G  G +G  G  G  GE G+ G+ GPPG QG PG  G++G  G+ G  GP+G PG +G 
Sbjct: 1060 RGAKGRRGPRGPDGTAGEPGSRGLKGPPGLQGRPGQPGQQGAAGERGDMGPRGFPGIQGP 1119

Query: 181  RGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLD------GIPGR 213
             GP G                     +MG  G  G  G  GLPGE G+       GIPG 
Sbjct: 1120 SGPPGTKGLPGEPGPQGPQGPVGPPGEMGPEGPSGAAGEPGLPGEAGMKGDLGPLGIPGE 1179

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G+ G  G+ GL G  G  G +G  G++G  GP G RG+ G  G+
Sbjct: 1180 QGLIGQRGEPGLEGDSGPAGPDGLKGDRGDLGPDGERGEKGQEGL 1224



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 79/151 (52%), Gaps = 27/151 (17%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  G KG+ G+   +   GA G VG PG   +PG+ G  G KG  GYPGP G PG++G+ 
Sbjct: 671 GAKGQKGDPGLSPGKAYDGAKGDVGLPG---LPGNPGPLGRKGLKGYPGPAGHPGEQGQP 727

Query: 182 GPKGD---MGYPGR------------------IGLDGRDGLP---GEPGLDGIPGRNGMD 217
           GP+G     GYPGR                  IGL G  GLP   GE GL G+PG+ G  
Sbjct: 728 GPEGSPGAKGYPGRQGLPGPVGGPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKM 787

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           G PG  G  G+ G PG +G  GE G+ GP G
Sbjct: 788 GRPGFPGDFGERGSPGLDGNPGELGLPGPSG 818



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 88/185 (47%), Gaps = 24/185 (12%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           I L  + G   S  E   PG+ G  G+ G  G  G+ G +G  G  G PG +G PGP G+
Sbjct: 760 IGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGSPGLDGNPGELGLPGPSGV 819

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGI 210
           PG  G  G  G +GYPGP+G+      +G  G+MG PG  G  G  G+P   G+PG  G 
Sbjct: 820 PGLIGDLGLLGPIGYPGPKGM------KGLMGNMGEPGLKGDKGEQGVPGVSGDPGFQGD 873

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTN---------------GEKGMTGPRGNRGKSGI 255
            G  G+ G PG  G PG  G  G  G+                G  G  GP G +GK G 
Sbjct: 874 KGSQGLPGFPGARGKPGPPGRVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGTKGKPGA 933

Query: 256 NGVPG 260
            G+PG
Sbjct: 934 RGLPG 938



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 85/181 (46%), Gaps = 39/181 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
            G  GP G KG +G  GE G+KG++GE+G PGV G PG QG          PG  GK GP 
Sbjct: 833  GYPGPKGMKGLMGNMGEPGLKGDKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPGPP 892

Query: 164  GDMGYPGPQ---------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG-- 206
            G +G  G                 G PGD    GP+G  G PG  GL G  G  G  G  
Sbjct: 893  GRVGDKGSLGFPGPPGPEGFPGDIGPPGDN---GPEGTKGKPGARGLPGPRGQLGPEGDE 949

Query: 207  ----------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                      L+G  GR G  G PG DGL G+ G PG  G  GE+G+ G  G  G+ GI 
Sbjct: 950  GPMGPPGAPGLEGQLGRKGFPGRPGPDGLKGEPGNPGRPGPVGEQGLLGFIGLVGEPGIM 1009

Query: 257  G 257
            G
Sbjct: 1010 G 1010



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 81/181 (44%), Gaps = 39/181 (21%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 1159 PGLPGEAGMKGDLGPLGIPGEQGLIGQRGEPGLEGDSGPAGPDGLKGDRGDLGPDGERGE 1218

Query: 169  PGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEP-------- 205
             G +G+ G+               EGK G +G+ G  G  G  G  G  GE         
Sbjct: 1219 KGQEGLMGEDGPPGPPGITGIRGPEGKPGKQGEKGQTGAKGAKGYQGQLGEMGTPGDPGP 1278

Query: 206  -------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                         G  GIPGR G  G PG  G  G  GI G  G  G KG  G +G+ GK
Sbjct: 1279 PGTPGPKGSRGSLGPTGIPGRMGPQGEPGLAGYDGHKGIVGPLGPPGSKGEKGEQGDDGK 1338

Query: 253  S 253
            +
Sbjct: 1339 A 1339



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 95/240 (39%), Gaps = 85/240 (35%)

Query: 100  QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------- 146
            QG      E   PGL+G   P G  G  G +G++G  GERGEKG  G++G          
Sbjct: 1180 QGLIGQRGE---PGLEGDSGPAGPDGLKGDRGDLGPDGERGEKGQEGLMGEDGPPGPPGI 1236

Query: 147  --PPGPQGIPGDEGKR---GPKGDMGYP---------------------------GPQGI 174
                GP+G PG +G++   G KG  GY                            GP GI
Sbjct: 1237 TGIRGPEGKPGKQGEKGQTGAKGAKGYQGQLGEMGTPGDPGPPGTPGPKGSRGSLGPTGI 1296

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLP-------------------------------- 202
            PG  G +G  G  GY G  G+ G  G P                                
Sbjct: 1297 PGRMGPQGEPGLAGYDGHKGIVGPLGPPGSKGEKGEQGDDGKAEGPPGPPGDRGPVGDPG 1356

Query: 203  --GEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GEPG  G PG+ G+ GI   PG+ G PG  G  G  G  G KG  GP+G +GK+G  G
Sbjct: 1357 DRGEPGDPGYPGQEGVQGIRGRPGQQGRPGHPGPQGRPGPKGSKGEEGPKGKQGKAGAAG 1416



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 84/183 (45%), Gaps = 39/183 (21%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGV-------------------- 144
            PPGLQG  GQ G+ GA GE G  G RG        G PG                     
Sbjct: 1086 PPGLQGRPGQPGQQGAAGERGDMGPRGFPGIQGPSGPPGTKGLPGEPGPQGPQGPVGPPG 1145

Query: 145  -VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             +GP GP G  G+ G  G  G  G  GP GIPG++G  G +G+ G  G  G  G DGL G
Sbjct: 1146 EMGPEGPSGAAGEPGLPGEAGMKGDLGPLGIPGEQGLIGQRGEPGLEGDSGPAGPDGLKG 1205

Query: 204  EP---GLDGIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNGEKGMTGPRGNRG 251
            +    G DG  G  G +G+ G+DG P         G +G PG  G  G+ G  G +G +G
Sbjct: 1206 DRGDLGPDGERGEKGQEGLMGEDGPPGPPGITGIRGPEGKPGKQGEKGQTGAKGAKGYQG 1265

Query: 252  KSG 254
            + G
Sbjct: 1266 QLG 1268



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 80/180 (44%), Gaps = 54/180 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PG  GP G KGE G  G  G  GE+G  G  G+VG PG   I G++G RG          
Sbjct: 970  PGRPGPDGLKGEPGNPGRPGPVGEQGLLGFIGLVGEPG---IMGEKGDRGMMGPPGAPGP 1026

Query: 163  KGDMGYPGPQG---------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            KG MG+PG  G                     + G +G+RGP+G             DG 
Sbjct: 1027 KGSMGHPGTSGSVGFPGEPGPPGPPGSRGPPGMRGAKGRRGPRGP------------DGT 1074

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             GEPG  G+ G  G+ G PG+         PG  G  GE+G  GPRG  G  G +G PGT
Sbjct: 1075 AGEPGSRGLKGPPGLQGRPGQ---------PGQQGAAGERGDMGPRGFPGIQGPSGPPGT 1125



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 85/192 (44%), Gaps = 54/192 (28%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------- 144
             M+G   +  E   PGL+G  G++G  G  G+ G +G++G +G PG              
Sbjct: 839  GMKGLMGNMGE---PGLKGDKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPGPPGRV 895

Query: 145  --------------------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
                                +GPP         G  GP+G  G PG +G+PG  G+ GP+
Sbjct: 896  GDKGSLGFPGPPGPEGFPGDIGPP---------GDNGPEGTKGKPGARGLPGPRGQLGPE 946

Query: 185  GDMGYPGRI------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            GD G  G        G  GR G PG PG DG+    G  G PG+ G  G+ G+ G  G  
Sbjct: 947  GDEGPMGPPGAPGLEGQLGRKGFPGRPGPDGL---KGEPGNPGRPGPVGEQGLLGFIGLV 1003

Query: 239  GEKGMTGPRGNR 250
            GE G+ G +G+R
Sbjct: 1004 GEPGIMGEKGDR 1015



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 81/191 (42%), Gaps = 54/191 (28%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDM 166
            G +GP G  GE G  GE G+KG+ G            P GIPG++      G+ G +GD 
Sbjct: 1148 GPEGPSGAAGEPGLPGEAGMKGDLG------------PLGIPGEQGLIGQRGEPGLEGDS 1195

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------------GLPGEPGLDGIPGRN 214
            G  GP G+ GD G  GP G+ G  G+ GL G D            G  G+PG  G  G+ 
Sbjct: 1196 GPAGPDGLKGDRGDLGPDGERGEKGQEGLMGEDGPPGPPGITGIRGPEGKPGKQGEKGQT 1255

Query: 215  GMDGIPGKDGLPGK------------------------DGIPGTNGTNGEKGMTGPRGNR 250
            G  G  G  G  G+                         GIPG  G  GE G+ G  G++
Sbjct: 1256 GAKGAKGYQGQLGEMGTPGDPGPPGTPGPKGSRGSLGPTGIPGRMGPQGEPGLAGYDGHK 1315

Query: 251  GKSGINGVPGT 261
            G  G  G PG+
Sbjct: 1316 GIVGPLGPPGS 1326



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 54/101 (53%), Gaps = 12/101 (11%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G  G  G +GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 1501 QLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQG 1560

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLD 196
             RGP G MG     GP GI G  G  GPKGD G  G +GL 
Sbjct: 1561 PRGPPGLMGKEGIIGPLGILGPSGLPGPKGDKGSRGDLGLQ 1601


>gi|335299051|ref|XP_003132237.2| PREDICTED: collagen alpha-1(VII) chain [Sus scrofa]
          Length = 2940

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 93/173 (53%), Gaps = 21/173 (12%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGP 150
            +G      E  P GL G  G +G+ G  GE G KGE G++G+ G++GP         PG 
Sbjct: 2525 RGAKGDMGERGPRGLDGDKGPRGDSGDPGEKGTKGEPGDRGSAGLLGPRGLTGPKGEPGA 2584

Query: 151  QGIPGDEGK---------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
             GIPGD G          RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G 
Sbjct: 2585 AGIPGDPGSPGKDGVPGVRGDKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGP 2641

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            PG PGL G  G  G  GIPG  G PGK+G+ G  G  G  G  GP+G++G+ G
Sbjct: 2642 PGRPGLAGRKGELGEPGIPGPSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKG 2694



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 83/158 (52%), Gaps = 23/158 (14%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
            G  G+KG++G+      VGPPGP+G  GD G+RGP+G  G  GP+G  GD G++G KG+ 
Sbjct: 2504 GSSGLKGDKGDSAV--TVGPPGPRGAKGDMGERGPRGLDGDKGPRGDSGDPGEKGTKGEP 2561

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G  G  GL G        GL G  G  G  GIPG  G PGKDG+PG  G  G+ G  GPR
Sbjct: 2562 GDRGSAGLLGPR------GLTGPKGEPGAAGIPGDPGSPGKDGVPGVRGDKGDVGFMGPR 2615

Query: 248  GNRGKSGINGV---------------PGTPAICAYKRE 270
            G +G+ G+ G                PG P +   K E
Sbjct: 2616 GLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGRKGE 2653



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 89/202 (44%), Gaps = 46/202 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G+KG  G      P G PG  G++G  G+ G PGP 
Sbjct: 2610 GFMGPRGLKGERGVKGACGLDGEKGDKGEAG------PPGRPGLAGRKGELGEPGIPGPS 2663

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------------- 204
            G PG EG  GPKGD G+ G+ G  G  G  GE                            
Sbjct: 2664 GAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGPPGTGGFPGPRGSDGSSGPPGPPGSV 2723

Query: 205  --PGLDGIPGRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G +G+ G+ G  G PG+   G PG  G PG  G  G  G  GPRG +G++ +     
Sbjct: 2724 GPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALT---- 2779

Query: 261  TPAICAYKRESCSLLPNSETSQ 282
                C +  +    L   E SQ
Sbjct: 2780 ----CEFGEDDIRGLVRQEMSQ 2797



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 89/186 (47%), Gaps = 46/186 (24%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ- 172
            ++GP G+KG+   +G  G+ G  G  G PG  GPPG Q   G  GK G  G  G PG + 
Sbjct: 1758 VRGPAGEKGD---RGPPGLDGRSGLDGKPGAAGPPGLQ---GTAGKAGDPGRDGLPGLRG 1811

Query: 173  --------------------------------GIPGDEGKRGPKGDMGYPGRIGLD---G 197
                                            G PG++G++G KGD G PGR G D   G
Sbjct: 1812 EQGPPGPPGPPGALGKPGEDGRPGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGHDGPKG 1871

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G PG PGL G PG  G  G PG+ G P   G+PG++G  G++G  GP+G +G  G  G
Sbjct: 1872 ERGAPGSPGLQGPPGLPGQVGPPGQ-GFP---GMPGSSGPKGDRGEIGPKGEQGLPGERG 1927

Query: 258  VPGTPA 263
            + G P 
Sbjct: 1928 LRGEPG 1933



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 78/147 (53%), Gaps = 18/147 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G +G+ G+ GA G  G  G+ GE+G PGV   PG  G+PG      P G  G PGP
Sbjct: 2237 PGLPGQVGETGKPGAPGRDGASGKDGERGVPGV---PGSPGLPG------PVGPKGEPGP 2287

Query: 172  QGIPGDE--GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
             G PG    G  G KG+ G PG +  D    L GEPG     G  G+ G  G+ G  G+ 
Sbjct: 2288 MGTPGQAVIGPPGAKGEKGTPGGLAGD----LVGEPGAK---GDRGLPGPRGEKGEAGRA 2340

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G PG  G +G+KG  G +GN+G  G+ 
Sbjct: 2341 GEPGDPGEDGQKGAPGLKGNKGDPGVG 2367



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 98/243 (40%), Gaps = 94/243 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVGP---PGPQGIPGDEGK 159
            PGL GP G+ GE+G KG+ G           GERG +GAPG  GP    G QG PG++G+
Sbjct: 1620 PGLVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGR 1679

Query: 160  RGPKGDMGY----------------------PGPQGIPGDEGK----------------- 180
             G  G  G                        G +G PGD G+                 
Sbjct: 1680 NGSPGPSGSKGDRGEPGPPGPPGRLVDTGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASG 1739

Query: 181  -------------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI-- 219
                               RGP G+ G  G  GLDGR GL G+PG  G PG  G  G   
Sbjct: 1740 ERGISGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPPGLQGTAGKAG 1799

Query: 220  -PGKDGLPG---------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             PG+DGLPG                     +DG PG NG NGE G  G  G +G+ G +G
Sbjct: 1800 DPGRDGLPGLRGEQGPPGPPGPPGALGKPGEDGRPGLNGKNGEPGDPGEDGRKGEKGDSG 1859

Query: 258  VPG 260
             PG
Sbjct: 1860 APG 1862



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 82/167 (49%), Gaps = 26/167 (15%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---------------EKG 140
            L    G         PPGLQG  G+ G+ G  G  G++GE+G               E G
Sbjct: 1773 LDGRSGLDGKPGAAGPPGLQGTAGKAGDPGRDGLPGLRGEQGPPGPPGPPGALGKPGEDG 1832

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
             PG+ G  G  G PG++G++G KGD       G PG EG  GPKG+ G PG  GL G  G
Sbjct: 1833 RPGLNGKNGEPGDPGEDGRKGEKGD------SGAPGREGHDGPKGERGAPGSPGLQGPPG 1886

Query: 201  LPGE-----PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            LPG+      G  G+PG +G  G  G+ G  G+ G+PG  G  GE G
Sbjct: 1887 LPGQVGPPGQGFPGMPGSSGPKGDRGEIGPKGEQGLPGERGLRGEPG 1933



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 92/211 (43%), Gaps = 65/211 (30%)

Query: 112  PGLQGPIGQKGEIGAKGE-----MGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRG 161
            PGL GP+G KGE G  G      +G  G +GEKG PG     +VG PG +G  G  G RG
Sbjct: 2273 PGLPGPVGPKGEPGPMGTPGQAVIGPPGAKGEKGTPGGLAGDLVGEPGAKGDRGLPGPRG 2332

Query: 162  PKGDMGYPGPQGIPGDEGKRGP------KGD----------------------------- 186
             KG+ G  G  G PG++G++G       KGD                             
Sbjct: 2333 EKGEAGRAGEPGDPGEDGQKGAPGLKGNKGDPGVGAQGPPGPLGPPGLKGDLGPPGPPGA 2392

Query: 187  ---MGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMD------------GIPGKDGLPGK 228
               +G+PG+ GL G  G P   GE GL G+PGR G              G PG  GL G 
Sbjct: 2393 PGIVGFPGQTGLRGEMGQPGPSGERGLAGLPGREGAPGPLGPPGPAGSVGAPGAPGLKGD 2452

Query: 229  DGIPGTN--GTNGEKGMTGPRGNRGKSGING 257
             G PG    G  GE+G  G RG  G+ G  G
Sbjct: 2453 KGDPGAGPPGARGERGEPGVRGEDGRPGPEG 2483



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 2/72 (2%)

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-IG 194
            +GE+G PG  G PG  G PG  G  GPKG  G+PGP+G PG+ G RGPKG+ G PGR IG
Sbjct: 1295 KGERGFPGADGSPGSPGRPGTPGTSGPKGSPGWPGPRGEPGERGPRGPKGEPGEPGRVIG 1354

Query: 195  LDGRDGLPGEPG 206
             +G  GLPG+ G
Sbjct: 1355 GEG-PGLPGQKG 1365



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 89/238 (37%), Gaps = 85/238 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--------------------------- 144
            PGL G  G  GE G  GE GV+GE+GE+G  G                            
Sbjct: 2038 PGLPGRAGSVGEAGRPGERGVRGEKGERGEQGRDGSPGLPGPPGPPGPKVAVDEIGSGLS 2097

Query: 145  --VGPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
               GPPG    +G PG +G RGPKGD G PG +G  G+ G+RG  G  G PG  G+ G +
Sbjct: 2098 RDQGPPGLKGAKGEPGSDGDRGPKGDRGMPGIKGDRGEPGQRGHDGSPGLPGERGVAGLE 2157

Query: 200  GLPGEPG------------------------LDGIPGRNGMDGIPG-------------- 221
            G PG  G                          G  G +G+ G PG              
Sbjct: 2158 GKPGPQGPRGVPGPVGGHGDPGPPGAPGLAGPSGPQGPSGLKGEPGDTGPPGRGLPGPTG 2217

Query: 222  ---------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                             G PG  G  G  G  G  G  G  G  G+ G+ GVPG+P +
Sbjct: 2218 AVGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGASGKDGERGVPGVPGSPGL 2275



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 88/203 (43%), Gaps = 47/203 (23%)

Query: 106  TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGP 162
            +++  PPGL+G    KGE G+ G+ G KG+RG  G  G  G PG +G    PG  G+RG 
Sbjct: 2097 SRDQGPPGLKG---AKGEPGSDGDRGPKGDRGMPGIKGDRGEPGQRGHDGSPGLPGERGV 2153

Query: 163  KGDMGYPGPQG---------------------IPGDEGKRGPKGDMGYPG---------- 191
             G  G PGPQG                     + G  G +GP G  G PG          
Sbjct: 2154 AGLEGKPGPQGPRGVPGPVGGHGDPGPPGAPGLAGPSGPQGPSGLKGEPGDTGPPGRGLP 2213

Query: 192  ----------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                        G  G  G  G PGL G  G  G  G PG+DG  GKDG  G  G  G  
Sbjct: 2214 GPTGAVGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGASGKDGERGVPGVPGSP 2273

Query: 242  GMTGPRGNRGKSGINGVPGTPAI 264
            G+ GP G +G+ G  G PG   I
Sbjct: 2274 GLPGPVGPKGEPGPMGTPGQAVI 2296



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/102 (44%), Positives = 52/102 (50%), Gaps = 16/102 (15%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------VGPP 148
            G      E   PG  G  G+KG+ GA G  G  G +GE+GAPG             VGPP
Sbjct: 1835 GLNGKNGEPGDPGEDGRKGEKGDSGAPGREGHDGPKGERGAPGSPGLQGPPGLPGQVGPP 1894

Query: 149  GPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDM 187
            G QG PG  G  GPKGD G  GP   QG+PG+ G RG  G +
Sbjct: 1895 G-QGFPGMPGSSGPKGDRGEIGPKGEQGLPGERGLRGEPGSV 1935



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 90/248 (36%), Gaps = 96/248 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-------------------------- 145
            PG  GP G +GEIG KGE G+ GERG +G PG V                          
Sbjct: 1902 PGSSGPKGDRGEIGPKGEQGLPGERGLRGEPGSVQNVERLLENIGLKTSALREIVETWDE 1961

Query: 146  ----------------------GPPGPQGIPGDEGKRGPKGDMGYPGPQ----------- 172
                                  GPPG +G  G  G RGPKGD G PGPQ           
Sbjct: 1962 SSGSFLPVPERLRGPKGNPGERGPPGKEGPIGFSGDRGPKGDRGDPGPQGPPGLALGERG 2021

Query: 173  --------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------- 208
                          GIPG  G+ G  G+ G PG  G+ G  G  GE G D          
Sbjct: 2022 PPGPPGLAGEPGKPGIPGLPGRAGSVGEAGRPGERGVRGEKGERGEQGRDGSPGLPGPPG 2081

Query: 209  -------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                         G+    G  G+ G  G PG DG  G  G  G  G+ G RG  G+ G 
Sbjct: 2082 PPGPKVAVDEIGSGLSRDQGPPGLKGAKGEPGSDGDRGPKGDRGMPGIKGDRGEPGQRGH 2141

Query: 256  NGVPGTPA 263
            +G PG P 
Sbjct: 2142 DGSPGLPG 2149



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 72/168 (42%), Gaps = 39/168 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
            GL GP G+KGE G  GE G  GE G+KGAPG+ G  G  G+                   
Sbjct: 2326 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGLKGNKGDPGVGAQGPPGPLGPPGLKGDLG 2385

Query: 166  ----------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------G 200
                      +G+PG  G+ G+ G+ GP G+ G     GL GR+               G
Sbjct: 2386 PPGPPGAPGIVGFPGQTGLRGEMGQPGPSGERGL---AGLPGREGAPGPLGPPGPAGSVG 2442

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             PG PGL G  G  G     G  G  G+ G PG  G +G  G  GPRG
Sbjct: 2443 APGAPGLKGDKGDPGA----GPPGARGERGEPGVRGEDGRPGPEGPRG 2486



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 93/221 (42%), Gaps = 69/221 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGP--------------------- 147
            PG++G  G+ G+ G  G  G+ GERG    +G PG  GP                     
Sbjct: 2127 PGIKGDRGEPGQRGHDGSPGLPGERGVAGLEGKPGPQGPRGVPGPVGGHGDPGPPGAPGL 2186

Query: 148  ---PGPQGIPGDEGKRG--------------------PKGDMGYPGPQGIPGDEGKRGPK 184
                GPQG  G +G+ G                    P G  G  GPQG PG  G+ G  
Sbjct: 2187 AGPSGPQGPSGLKGEPGDTGPPGRGLPGPTGAVGLPGPPGPSGLVGPQGAPGLPGQVGET 2246

Query: 185  GDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTN---- 235
            G  G PGR G  G+D   G+PG PG  G+PG  G  G PG  G PG+   G PG      
Sbjct: 2247 GKPGAPGRDGASGKDGERGVPGVPGSPGLPGPVGPKGEPGPMGTPGQAVIGPPGAKGEKG 2306

Query: 236  -------------GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                         G  G++G+ GPRG +G++G  G PG P 
Sbjct: 2307 TPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2347



 Score = 47.4 bits (111), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 68/161 (42%), Gaps = 37/161 (22%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G C    E    G  GP G+ G  G KGE+G  G  G  GAPG  G  GP+G  G +
Sbjct: 2622 GVKGACGLDGEKGDKGEAGPPGRPGLAGRKGELGEPGIPGPSGAPGKEGLIGPKGDRGFD 2681

Query: 158  GKRGPKGDMGYPG---------------------------------PQGIPGDEGKRGPK 184
            G+ GPKGD G  G                                 P+G+ G +G+RGP 
Sbjct: 2682 GQPGPKGDQGEKGERGPPGTGGFPGPRGSDGSSGPPGPPGSVGPKGPEGLQGQKGERGPP 2741

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G+      +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 2742 GES----VVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAAL 2778



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 66/136 (48%), Gaps = 17/136 (12%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRG---------------PKGD 165
            ++G  G  G  G +GE+G PG+   G PGP+G PG+ G  G                KGD
Sbjct: 1554 DMGPTGPKGATGTKGERGPPGLALPGDPGPKGDPGERGPIGLTGRAGPPGDSGPPGEKGD 1613

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G PG  G+ G  G+ G  G+ G  G  G  G  G  GE GL G PG  G  G  G  G 
Sbjct: 1614 PGRPGTPGLVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGD 1673

Query: 226  PGKDGIPGTNGTNGEK 241
            PG+DG  G+ G +G K
Sbjct: 1674 PGEDGRNGSPGPSGSK 1689



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 88/237 (37%), Gaps = 96/237 (40%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEG--------------- 158
            + G  G  G+ GV GERG +G PG  GP G +G+      PG++G               
Sbjct: 1448 EDGAPGLPGQPGVPGERGLRGFPGDTGPKGDRGLTGAVGEPGEKGERGSPGPVGPQGPPG 1507

Query: 159  ------------------KRGPKG----------------------DMGYPGPQGIPGDE 178
                              +RG KG                      DMG  GP+G  G +
Sbjct: 1508 VPGRPGAEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGAKGEKGDMGPTGPKGATGTK 1567

Query: 179  GKR-----------GPKGDMGYPGRIGLDGR------------DGLPGEPGLDGIPGRNG 215
            G+R           GPKGD G  G IGL GR             G PG PG  G+ G  G
Sbjct: 1568 GERGPPGLALPGDPGPKGDPGERGPIGLTGRAGPPGDSGPPGEKGDPGRPGTPGLVGPRG 1627

Query: 216  MDGIPGKDG------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             DG  G+ G              G+ G+ G  G  G  G  G +G+ G+ G NG PG
Sbjct: 1628 RDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRNGSPG 1684



 Score = 42.7 bits (99), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 74/195 (37%), Gaps = 81/195 (41%)

Query: 114  LQGPIGQKGE---------IGAKGEMGVKGER---------------------------- 136
            L+GP G  GE         IG  G+ G KG+R                            
Sbjct: 1973 LRGPKGNPGERGPPGKEGPIGFSGDRGPKGDRGDPGPQGPPGLALGERGPPGPPGLAGEP 2032

Query: 137  ---------GEKGAPGVVGPPGPQGIPGDEGKRGPKG----------------------- 164
                     G  G+ G  G PG +G+ G++G+RG +G                       
Sbjct: 2033 GKPGIPGLPGRAGSVGEAGRPGERGVRGEKGERGEQGRDGSPGLPGPPGPPGPKVAVDEI 2092

Query: 165  ------DMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
                  D G P   G +G PG +G RGPKGD G P   G+ G  G PG+ G DG PG  G
Sbjct: 2093 GSGLSRDQGPPGLKGAKGEPGSDGDRGPKGDRGMP---GIKGDRGEPGQRGHDGSPGLPG 2149

Query: 216  MDGIPGKDGLPGKDG 230
              G+ G +G PG  G
Sbjct: 2150 ERGVAGLEGKPGPQG 2164



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 67/127 (52%), Gaps = 11/127 (8%)

Query: 100  QGFCNSTKEYCPPGLQ--GPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPP 148
            +G   +  E  PPGL   G  G KG+ G +G +G+ G           GEKG PG  G P
Sbjct: 1561 KGATGTKGERGPPGLALPGDPGPKGDPGERGPIGLTGRAGPPGDSGPPGEKGDPGRPGTP 1620

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  G  G +G+ G KGD G PG  G+PG  G+RG +G  G  G +G  G  G PGE G +
Sbjct: 1621 GLVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRN 1680

Query: 209  GIPGRNG 215
            G PG +G
Sbjct: 1681 GSPGPSG 1687



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 28/52 (53%)

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G PG DG PG  G  G PG  G  G  G PG  G  GE+G  GP+G  G+ G
Sbjct: 1299 GFPGADGSPGSPGRPGTPGTSGPKGSPGWPGPRGEPGERGPRGPKGEPGEPG 1350



 Score = 39.7 bits (91), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 77/205 (37%), Gaps = 72/205 (35%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPG----VVGPPG 149
            +GF  +      PG  G  G  G  G+ G  G +GE GE      KG PG    V+G  G
Sbjct: 1298 RGFPGADGSPGSPGRPGTPGTSGPKGSPGWPGPRGEPGERGPRGPKGEPGEPGRVIGGEG 1357

Query: 150  PQGIPGDEGK-----------------------------RGPKGDMGYPGPQGIPGDEGK 180
            P G+PG +G                              +G KGD G  GP G PGD G 
Sbjct: 1358 P-GLPGQKGDPGLPGPPGSRGPSGDPGPRGPPGFPGTAVKGEKGDRGERGPPG-PGD-GT 1414

Query: 181  RGP-----------------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
              P                       KG+ G       D  DG PG PG  G+PG  G+ 
Sbjct: 1415 AAPGDPGLPGLPGSPGPQGPVGPPGEKGEKG-------DSEDGAPGLPGQPGVPGERGLR 1467

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG  G  G  G+ G  G  GEKG
Sbjct: 1468 GFPGDTGPKGDRGLTGAVGEPGEKG 1492


>gi|410976111|ref|XP_003994468.1| PREDICTED: collagen alpha-1(XVII) chain [Felis catus]
          Length = 1655

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 85/162 (52%), Gaps = 19/162 (11%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP---GPQGIPGD 177
           +G  G KG+MG +G +G++G PG  G PG  G PG EG +G KG +G P   GP G  G 
Sbjct: 753 RGSPGPKGDMGSQGPKGDRGLPGTPGIPGLLGHPGPEGPKGQKGSVGEPGMEGPMGQRGR 812

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---------------IPGK 222
           EG  GP+G+ G PG  G  G  G  GEPG+ G PG  G  G                 G 
Sbjct: 813 EGPMGPRGEAGPPG-FGEKGDRGAAGEPGVQGPPGVPGSVGPKGSSGSPGPRGPPGSVGP 871

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            GL G+ G+PG  G  G  G  GP+G++G+ G  G+ G P +
Sbjct: 872 QGLRGEVGLPGVKGDKGPMGSPGPKGDQGEKGPRGLTGEPGL 913



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/153 (47%), Positives = 89/153 (58%), Gaps = 4/153 (2%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG++GP+GQ+G    +G +GE G  G  GEKG  G  G PG QG PG  G  GPKG  G 
Sbjct: 801 PGMEGPMGQRGREGPMGPRGEAGPPG-FGEKGDRGAAGEPGVQGPPGVPGSVGPKGSSGS 859

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP+G PG  G +G +G++G PG  G  G  G PG  G  G  G  G+ G PG  GLPG 
Sbjct: 860 PGPRGPPGSVGPQGLRGEVGLPGVKGDKGPMGSPGPKGDQGEKGPRGLTGEPGLRGLPGA 919

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG  G  G  G  G +G RG+ G+ G+PGT
Sbjct: 920 VGEPGAKGAMGPAGPDGHQGPRGEQGLTGMPGT 952



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 78/158 (49%), Gaps = 30/158 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV------------KGERGEKGAPGVVGPPGPQGIPG---D 156
           PG+QGP G  G +G KG  G             +G RGE G PGV G  GP G PG   D
Sbjct: 839 PGVQGPPGVPGSVGPKGSSGSPGPRGPPGSVGPQGLRGEVGLPGVKGDKGPMGSPGPKGD 898

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN-- 214
           +G++GP+G  G PG +G+PG  G+ G KG M   G  G DG  G  GE GL G+PG    
Sbjct: 899 QGEKGPRGLTGEPGLRGLPGAVGEPGAKGAM---GPAGPDGHQGPRGEQGLTGMPGTRGP 955

Query: 215 ----------GMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                     G+ G  G  GLPG  G PG  G  G  G
Sbjct: 956 PGPSGDPGKPGLTGPQGPQGLPGTPGRPGAKGEPGSPG 993


>gi|348553060|ref|XP_003462345.1| PREDICTED: collagen alpha-1(XXI) chain-like [Cavia porcellus]
          Length = 964

 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 87/166 (52%), Gaps = 7/166 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY 168
           PG  G  GQ G+ G  G  G+ G  G  G+PG+ G    PG +G PG +G++G +G  G+
Sbjct: 463 PGNPGHPGQTGQDGKPGYQGISGSPGVPGSPGIQGARGLPGYKGEPGRDGQKGDRGLPGF 522

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGR----DGLPGEPGLDGIPGRNGMDGIPGKDG 224
           PG  G+PG +GK GPKGD G PG  G  G      G  GE G  G PG  G  G PG+ G
Sbjct: 523 PGLHGMPGSKGKMGPKGDKGSPGFYGKKGMLLLIQGAKGEKGNAGFPGLPGHPGEPGRHG 582

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G  G PG  G  G  GM G  G +G+ GI G PG   +   K E
Sbjct: 583 KDGLMGSPGFKGEAGSPGMPGQDGPQGEPGIPGFPGNQGLMGQKGE 628



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 90/173 (52%), Gaps = 24/173 (13%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           +QG  G+KG  G  G  G  GE G  G  G++G PG +G  G  G  G  G  G PG  G
Sbjct: 556 IQGAKGEKGNAGFPGLPGHPGEPGRHGKDGLMGSPGFKGEAGSPGMPGQDGPQGEPGIPG 615

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------------------EPGLDGIPG 212
            PG++G  G KG++G PG +G  G  G+PG                     EPGL G+PG
Sbjct: 616 FPGNQGLMGQKGEIGPPGPVGKKGAPGMPGLMGSHGTPGQPGPPGAKGSKGEPGLQGLPG 675

Query: 213 RNGMDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            +G+ G PG  GLPG+    G+PGT+G  G+KG  G +G +G+ G  G  G P
Sbjct: 676 ASGLKGDPGARGLPGEAGYAGLPGTHGKKGDKGNQGEKGIQGQKGETGRQGIP 728



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 96/205 (46%), Gaps = 46/205 (22%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   S      PG+QG    +G  G KGE G  G++G++G PG    PG  G+PG +GK
Sbjct: 481 QGISGSPGVPGSPGIQG---ARGLPGYKGEPGRDGQKGDRGLPGF---PGLHGMPGSKGK 534

Query: 160 RGPKGDMGYPG----------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL-------- 201
            GPKGD G PG           QG  G++G  G  G  G+PG  G  G+DGL        
Sbjct: 535 MGPKGDKGSPGFYGKKGMLLLIQGAKGEKGNAGFPGLPGHPGEPGRHGKDGLMGSPGFKG 594

Query: 202 ----PGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTG--------- 245
               PG PG DG  G  G+ G PG  GL G+    G PG  G  G  GM G         
Sbjct: 595 EAGSPGMPGQDGPQGEPGIPGFPGNQGLMGQKGEIGPPGPVGKKGAPGMPGLMGSHGTPG 654

Query: 246 ------PRGNRGKSGINGVPGTPAI 264
                  +G++G+ G+ G+PG   +
Sbjct: 655 QPGPPGAKGSKGEPGLQGLPGASGL 679



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 91/195 (46%), Gaps = 39/195 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------------ERGEKGAPGVVGPPGP 150
           PG QG +GQKGEIG  G +G KG                      +G KG PG+ G PG 
Sbjct: 617 PGNQGLMGQKGEIGPPGPVGKKGAPGMPGLMGSHGTPGQPGPPGAKGSKGEPGLQGLPGA 676

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP-------- 202
            G+ GD G RG  G+ GY G  G  G +G +G +G+ G  G+ G  GR G+P        
Sbjct: 677 SGLKGDPGARGLPGEAGYAGLPGTHGKKGDKGNQGEKGIQGQKGETGRQGIPGQQGIQGH 736

Query: 203 ----GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
               GE G  G P   G+ G PG  G  G DGI G  G  G  G  GP   +G  G++G 
Sbjct: 737 QGAKGEKGEKGEP---GISGAPGPKGESGMDGITGPAGPQGLPGAAGP---QGPPGLDGK 790

Query: 259 PGTPAICAYKRESCS 273
           PG      + R+ C+
Sbjct: 791 PGREFSEQFIRQVCT 805



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 87/186 (46%), Gaps = 24/186 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+   GF         PG  GP G+ G  G  G  G+ G++GE G PG VG  G  G+PG
Sbjct: 586 LMGSPGFKGEAGSPGMPGQDGPQGEPGIPGFPGNQGLMGQKGEIGPPGPVGKKGAPGMPG 645

Query: 156 DEGKRG---------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             G  G          KG  G PG QG+PG  G +G  G  G PG  G     GLPG  G
Sbjct: 646 LMGSHGTPGQPGPPGAKGSKGEPGLQGLPGASGLKGDPGARGLPGEAGY---AGLPGTHG 702

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIP------------GTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G  GI G+ G  G+ GIP            G  G  GE G++G  G +G+SG
Sbjct: 703 KKGDKGNQGEKGIQGQKGETGRQGIPGQQGIQGHQGAKGEKGEKGEPGISGAPGPKGESG 762

Query: 255 INGVPG 260
           ++G+ G
Sbjct: 763 MDGITG 768



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 88/181 (48%), Gaps = 34/181 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMG-------------VKGERGEKGAPGVVGPPGPQGIPGDEG 158
           PGL G  G KG++G KG+ G             ++G +GEKG  G  G PG  G PG  G
Sbjct: 523 PGLHGMPGSKGKMGPKGDKGSPGFYGKKGMLLLIQGAKGEKGNAGFPGLPGHPGEPGRHG 582

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMG---YPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           K G  G  G+ G  G PG  G+ GP+G+ G   +PG  GL G+ G  G PG  G  G  G
Sbjct: 583 KDGLMGSPGFKGEAGSPGMPGQDGPQGEPGIPGFPGNQGLMGQKGEIGPPGPVGKKGAPG 642

Query: 216 MDGI---------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           M G+                G  G PG  G+PG +G  G+ G    RG  G++G  G+PG
Sbjct: 643 MPGLMGSHGTPGQPGPPGAKGSKGEPGLQGLPGASGLKGDPGA---RGLPGEAGYAGLPG 699

Query: 261 T 261
           T
Sbjct: 700 T 700



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 60/125 (48%), Gaps = 22/125 (17%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
           G+PG+ G  G  G  G PG QGI          G  G PG  G+ G  GLP   GEPG D
Sbjct: 461 GLPGNPGHPGQTGQDGKPGYQGI---------SGSPGVPGSPGIQGARGLPGYKGEPGRD 511

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------GEKGM----TGPRGNRGKSGINGV 258
           G  G  G+ G PG  G+PG  G  G  G        G+KGM     G +G +G +G  G+
Sbjct: 512 GQKGDRGLPGFPGLHGMPGSKGKMGPKGDKGSPGFYGKKGMLLLIQGAKGEKGNAGFPGL 571

Query: 259 PGTPA 263
           PG P 
Sbjct: 572 PGHPG 576


>gi|363732236|ref|XP_419902.3| PREDICTED: collagen alpha-1(XXI) chain [Gallus gallus]
          Length = 957

 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 85/162 (52%), Gaps = 12/162 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG---YPGPQGIP 175
           GQ G  G  G  G  G  G  G PGV GP G  GI G+ GK G KGD G   +PG  G+P
Sbjct: 470 GQPGPDGKPGYQGSAGTPGIPGTPGVQGPRGLPGIKGEPGKDGTKGDRGLPGFPGLHGMP 529

Query: 176 GDEGKRGPKGDMGYPG------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
             +G+RGPKGD G PG        G  G  G PG PG  G PGR+G DG+PG  G  G+ 
Sbjct: 530 APKGERGPKGDQGVPGIYGKKGSKGEKGDTGFPGMPGRSGDPGRSGKDGLPGSPGFKGEV 589

Query: 230 GIPGT---NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G PG+    G  GE G+ G  GN+G  G  G  G P +   K
Sbjct: 590 GQPGSPGLEGHRGEPGIPGIPGNQGAKGQKGEIGPPGLPGAK 631



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 94/174 (54%), Gaps = 18/174 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDM-- 166
           PG  G  G+ G+ G  G  G KGE G+ G+PG+    G PG  GIPG++G +G KG++  
Sbjct: 565 PGRSGDPGRSGKDGLPGSPGFKGEVGQPGSPGLEGHRGEPGIPGIPGNQGAKGQKGEIGP 624

Query: 167 -GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD-------- 217
            G PG +G PG+ G  GP+G  G PG  G  G     GEPGL G PG +G          
Sbjct: 625 PGLPGAKGSPGETGLMGPEGSFGLPGAPGPKGDK---GEPGLQGKPGSSGAKGEPGGPGA 681

Query: 218 -GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G PG  G+PG  GI G  G+ GE G+ G +G +G+ G  G+ GT  +   + E
Sbjct: 682 PGEPGYPGIPGTQGIKGDKGSQGESGIQGRKGEKGRQGNPGLQGTEGLRGEQGE 735



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 87/185 (47%), Gaps = 24/185 (12%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     +   PGL+G  G+ G  G  G  G KG++GE G PG+   PG +G PG+ G  
Sbjct: 584 GFKGEVGQPGSPGLEGHRGEPGIPGIPGNQGAKGQKGEIGPPGL---PGAKGSPGETGLM 640

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMG---------------------YPGRIGLDGRD 199
           GP+G  G PG  G  GD+G+ G +G  G                      PG  G+ G  
Sbjct: 641 GPEGSFGLPGAPGPKGDKGEPGLQGKPGSSGAKGEPGGPGAPGEPGYPGIPGTQGIKGDK 700

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G  GE G+ G  G  G  G PG  G  G  G  G  G  G+ G+ G  G +G+SGI G+ 
Sbjct: 701 GSQGESGIQGRKGEKGRQGNPGLQGTEGLRGEQGEKGEKGDPGIRGINGQKGESGIQGLV 760

Query: 260 GTPAI 264
           G P +
Sbjct: 761 GPPGV 765



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 82/155 (52%), Gaps = 9/155 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  G  G    KGE G K   G++G PG+ G  G +G  GD G  G  G  G PG  
Sbjct: 518 GLPGFPGLHGMPAPKGERGPK---GDQGVPGIYGKKGSKGEKGDTGFPGMPGRSGDPGRS 574

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------GIPGKDGLP 226
           G  G  G  G KG++G PG  GL+G  G PG PG+ G  G  G        G+PG  G P
Sbjct: 575 GKDGLPGSPGFKGEVGQPGSPGLEGHRGEPGIPGIPGNQGAKGQKGEIGPPGLPGAKGSP 634

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G+ G+ G  G+ G  G  GP+G++G+ G+ G PG+
Sbjct: 635 GETGLMGPEGSFGLPGAPGPKGDKGEPGLQGKPGS 669



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 69/152 (45%), Gaps = 24/152 (15%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------VKGERGEKGAPGVVGPPGPQG- 152
           QG      E  PPGL G  G  GE G  G  G        G +G+KG PG+ G PG  G 
Sbjct: 613 QGAKGQKGEIGPPGLPGAKGSPGETGLMGPEGSFGLPGAPGPKGDKGEPGLQGKPGSSGA 672

Query: 153 -----------------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                            IPG +G +G KG  G  G QG  G++G++G  G  G  G  G 
Sbjct: 673 KGEPGGPGAPGEPGYPGIPGTQGIKGDKGSQGESGIQGRKGEKGRQGNPGLQGTEGLRGE 732

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            G  G  G+PG+ GI G+ G  GI G  G PG
Sbjct: 733 QGEKGEKGDPGIRGINGQKGESGIQGLVGPPG 764



 Score = 39.7 bits (91), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 24/38 (63%)

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+PG DG+PG  GIPG  G  G +G+ G  G +G  GI
Sbjct: 846 GLPGNDGVPGLTGIPGRPGARGTRGLPGKNGAKGNQGI 883


>gi|307200815|gb|EFN80868.1| Collagen alpha-1(IV) chain [Harpegnathos saltator]
          Length = 2021

 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/186 (43%), Positives = 101/186 (54%), Gaps = 14/186 (7%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGE---------IGAKGEMGVKGERGEKGAPGVVGP 147
              + GF  +  +   PG+ GP G  G           GA+G  G+KGERG+KG+PG  G 
Sbjct: 1189 AGLPGFPGTKGDRGEPGIDGPKGYPGRRGLPGSPGIPGAEGAPGIKGERGDKGSPGFPGL 1248

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            PG +G PG  G  G KGD+G PG  G+PG  G  GPKGD+G PG   L GR G PG+   
Sbjct: 1249 PGMEGKPGRPGIAGLKGDIGLPGVPGLPGLVGHDGPKGDIGQPG---LPGRKGEPGQVSE 1305

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT--GPRGNRGKSGINGVPGTPAIC 265
             G  G  GM GI G  G PG+DGI G  G  GE G+   G  G +G+ GI G+ GTP   
Sbjct: 1306 KGQKGEPGMPGIRGPQGPPGRDGIDGAKGEPGEPGIGRDGRPGLKGERGIPGLDGTPGFQ 1365

Query: 266  AYKRES 271
              K ++
Sbjct: 1366 GQKGDT 1371



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 81/133 (60%), Gaps = 17/133 (12%)

Query: 140 GAPGVVGPPGP---QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           G PG++GP GP   QG PG EG  GPKG  G PGPQG+PG +G R   G MG PG  G++
Sbjct: 323 GPPGILGPQGPKGQQGFPGTEGLLGPKGQKGDPGPQGLPGIKGDR---GKMGMPGFPGIN 379

Query: 197 GRDGLPGEPGLDGIPGR---NGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTG----- 245
           G  G+ G PG  G+PGR   NG DG PG+ G+ G+    G+PGT G  GEKG        
Sbjct: 380 GVPGVQGPPGSTGLPGRDGCNGTDGAPGRKGIHGESGPRGLPGTPGPKGEKGQPAYAGSF 439

Query: 246 PRGNRGKSGINGV 258
           P G +G+ G++GV
Sbjct: 440 PVGQKGEPGMDGV 452



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 102/204 (50%), Gaps = 48/204 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG-------------- 158
            G +G IGQ G  G KGE G   E+G+KG PG+ G  GPQG PG +G              
Sbjct: 1283 GPKGDIGQPGLPGRKGEPGQVSEKGQKGEPGMPGIRGPQGPPGRDGIDGAKGEPGEPGIG 1342

Query: 159  ---KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPG 212
               + G KG+ G PG  G PG +G++G  G  G+PG  G  G  G+PGE   PG+DGIPG
Sbjct: 1343 RDGRPGLKGERGIPGLDGTPGFQGQKGDTGVQGFPGMKGDLGAPGVPGELGPPGIDGIPG 1402

Query: 213  ------------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
                                    R G+DG+ G  G+PG  G+PG +G  GEKG  GP G
Sbjct: 1403 EDGDLGPSGPPGFPGLDGEMGPAGRPGLDGVKGDRGIPGIVGLPGISGALGEKGDRGPPG 1462

Query: 249  N----RGKSGINGVPGTPAICAYK 268
                 +G+ G  G+PG+P +   K
Sbjct: 1463 PTIQIKGEKGEPGIPGSPGLSGEK 1486



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 105/195 (53%), Gaps = 25/195 (12%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---D 156
            +G   S  +  P G  GP G+ G +G  G  G+   +GEKG PG++G  G  G+PG   D
Sbjct: 1504 RGLPGSEGQPGPHGAPGPKGEYGPVGVPGFPGLA-IKGEKGLPGLLGKHGRDGLPGRPGD 1562

Query: 157  EGKRG------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGE--- 204
            +G+RG      PKGD+G  GP G  G++G+ G +G  G PGR    GLDG  GLPGE   
Sbjct: 1563 KGERGLPGLPGPKGDIGPYGPVGPQGEKGESGQQGLTGAPGRDGASGLDGAPGLPGERGQ 1622

Query: 205  ------PGLDGIPGRNGMDGIPGK---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                  PGL G PG+ G  G+ G    DGLPG+ G  G +G NG  G  G +G+RG +G+
Sbjct: 1623 KGDQGSPGLFGAPGQKGEPGLSGPSGLDGLPGEKGERGWDGLNGPPGSLGEKGDRGYTGV 1682

Query: 256  NGVPGTPAICAYKRE 270
             G+ G       K E
Sbjct: 1683 AGLIGAIGYVGQKGE 1697



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 91/195 (46%), Gaps = 38/195 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG--------------ERGEKGAPGVVGPPGPQGIPGDE 157
            PG +GP G  G    KG+ G  G              E+GE+G PG  G  GP G PG  
Sbjct: 1070 PGREGPRGFPGAPAPKGDKGEAGISVKGSPGLPGPPGEKGERGLPGPPGKEGPDGYPGLA 1129

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRG------------------PKGDMGYPGRIGLDGRD 199
            G  G KGD+G PG  G+PG  G+RG                    G  G PG  G  GR 
Sbjct: 1130 GLSGEKGDIGAPGINGLPGAPGERGDTGLVGPPGPPGVAGIPGADGSKGEPGLPGESGRA 1189

Query: 200  GLPGEPGLDGIPGRNGMDG---IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            GLPG PG  G  G  G+DG    PG+ GLPG  GIPG  G  G KG  G +G+ G  G+ 
Sbjct: 1190 GLPGFPGTKGDRGEPGIDGPKGYPGRRGLPGSPGIPGAEGAPGIKGERGDKGSPGFPGLP 1249

Query: 257  GV---PGTPAICAYK 268
            G+   PG P I   K
Sbjct: 1250 GMEGKPGRPGIAGLK 1264



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 94/197 (47%), Gaps = 31/197 (15%)

Query: 95   PLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---GPPGPQ 151
            P +   G      E   PGL G  G +G+ G  G  G  G +G+ GAPGV    GPPG  
Sbjct: 1339 PGIGRDGRPGLKGERGIPGLDGTPGFQGQKGDTGVQGFPGMKGDLGAPGVPGELGPPGID 1398

Query: 152  GIPGD---------------EGKRGP---------KGDMGYPGPQGIPGDEGKRGPKGDM 187
            GIPG+               +G+ GP         KGD G PG  G+PG  G  G KGD 
Sbjct: 1399 GIPGEDGDLGPSGPPGFPGLDGEMGPAGRPGLDGVKGDRGIPGIVGLPGISGALGEKGDR 1458

Query: 188  GYPGRI----GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G PG      G  G  G+PG PGL G  G  G++GI G DG  G  G+PG+ G  G  G 
Sbjct: 1459 GPPGPTIQIKGEKGEPGIPGSPGLSGEKGDRGVEGIAGYDGEKGDRGLPGSEGQPGPHGA 1518

Query: 244  TGPRGNRGKSGINGVPG 260
             GP+G  G  G+ G PG
Sbjct: 1519 PGPKGEYGPVGVPGFPG 1535



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 90/170 (52%), Gaps = 29/170 (17%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG+ GP G KG+ G  G  G+ G +G+KG PG      PQG+PG +G RG  G  G+PG
Sbjct: 324 PPGILGPQGPKGQQGFPGTEGLLGPKGQKGDPG------PQGLPGIKGDRGKMGMPGFPG 377

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------ 224
             G+P   G +GP G  G PGR G +G DG PG  G+ G  G  G+ G PG  G      
Sbjct: 378 INGVP---GVQGPPGSTGLPGRDGCNGTDGAPGRKGIHGESGPRGLPGTPGPKGEKGQPA 434

Query: 225 ----LP-GKDGIPGTNGT---------NGEKGMTGPRGNRGKSGINGVPG 260
                P G+ G PG +G           G++G +G +G RG  G +G+PG
Sbjct: 435 YAGSFPVGQKGEPGMDGVRGPPGPPGLQGDRGSSGIKGERGPYGASGIPG 484



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/190 (37%), Positives = 93/190 (48%), Gaps = 33/190 (17%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEI-------GAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            G   S+ +   PGL G  G+ G+        G KG+ G+ G++GE G PG+ G PG +G+
Sbjct: 968  GRPGSSGQKGEPGLYGQKGEPGQCPSLYLLKGFKGDRGLTGDKGEPGPPGLDGIPGDKGL 1027

Query: 154  PGDEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G  G  GP G  G P   GP+G+PG  G +G  G MG+PG  G +G  G PG P   G 
Sbjct: 1028 QGFAGPPGPLGQTGAPGPVGPRGLPGPRGDKGNMGPMGFPGEPGREGPRGFPGAPAPKGD 1087

Query: 211  PGRNGMD-----------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
             G  G+                  G+PG  G  G DG PG  G +GEK      G+ G  
Sbjct: 1088 KGEAGISVKGSPGLPGPPGEKGERGLPGPPGKEGPDGYPGLAGLSGEK------GDIGAP 1141

Query: 254  GINGVPGTPA 263
            GING+PG P 
Sbjct: 1142 GINGLPGAPG 1151



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 95/192 (49%), Gaps = 36/192 (18%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE---------KGAPGVVGPP 148
             QGF  +       GL GP GQKG+ G +G  G+KG+RG+          G PGV GPP
Sbjct: 335 GQQGFPGTE------GLLGPKGQKGDPGPQGLPGIKGDRGKMGMPGFPGINGVPGVQGPP 388

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLP 202
           G  G+PG +G     G  G PG +GI G+ G R      GPKG+ G P   G     G  
Sbjct: 389 GSTGLPGRDGC---NGTDGAPGRKGIHGESGPRGLPGTPGPKGEKGQPAYAGSF-PVGQK 444

Query: 203 GEPGLDGI---------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT--GPRGNRG 251
           GEPG+DG+          G  G  GI G+ G  G  GIPG  G  G  G+   G +G++G
Sbjct: 445 GEPGMDGVRGPPGPPGLQGDRGSSGIKGERGPYGASGIPGPKGEKGNMGLGFEGLKGDKG 504

Query: 252 KSGINGVPGTPA 263
           + G  G PGT A
Sbjct: 505 QKGEPGPPGTTA 516



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 85/175 (48%), Gaps = 24/175 (13%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-----PKGDMGYPGPQGIP 175
            KG  G +G  G+KG  G++G PG  G  G  GIPG +G++G       G+ G PG  G  
Sbjct: 917  KGRPGFEGFPGLKGTPGDRGFPGQDGVAGKPGIPGRKGEKGLSVKGEPGEAGRPGSSGQK 976

Query: 176  GDEGKRGPKGD----------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G+ G  G KG+           G+ G  GL G  G PG PGLDGIPG  G+ G  G  G 
Sbjct: 977  GEPGLYGQKGEPGQCPSLYLLKGFKGDRGLTGDKGEPGPPGLDGIPGDKGLQGFAGPPGP 1036

Query: 226  PGKDGIPGT------NGTNGEKGMTGPR---GNRGKSGINGVPGTPAICAYKRES 271
             G+ G PG        G  G+KG  GP    G  G+ G  G PG PA    K E+
Sbjct: 1037 LGQTGAPGPVGPRGLPGPRGDKGNMGPMGFPGEPGREGPRGFPGAPAPKGDKGEA 1091



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 82/154 (53%), Gaps = 23/154 (14%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------VVGPPGPQG 152
           Y   G+ GP G+KG +G  G  G+KG++G+KG PG                V GP G  G
Sbjct: 477 YGASGIPGPKGEKGNMGL-GFEGLKGDKGQKGEPGPPGTTAPIMPFQGVREVTGPQGESG 535

Query: 153 IPGDEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             GD+G+ GP+G  G P   G  GIPG  G+   KG+ G PG  G+ GRDG  G PG  G
Sbjct: 536 HKGDKGEMGPEGQKGEPGFIGDHGIPGGSGQ---KGEKGLPGAPGIRGRDGFSGPPGPPG 592

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G  G+DG+ G  G PGK G PG +G  G  G+
Sbjct: 593 RKGDRGIDGLEGLSGRPGKKGEPGRDGPMGVAGL 626



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 9/109 (8%)

Query: 170 GPQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           GPQG       PG EG  GPKG  G PG  GL    G+ G+ G  G+PG  G++G+PG  
Sbjct: 329 GPQGPKGQQGFPGTEGLLGPKGQKGDPGPQGL---PGIKGDRGKMGMPGFPGINGVPGVQ 385

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
           G PG  G+PG +G NG  G  G +G  G+SG  G+PGTP     K +  
Sbjct: 386 GPPGSTGLPGRDGCNGTDGAPGRKGIHGESGPRGLPGTPGPKGEKGQPA 434



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 78/154 (50%), Gaps = 24/154 (15%)

Query: 112  PGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL GP   IG  G +G +GE G  G++G  GAPG  G  G  G PG  G+RG KGD G 
Sbjct: 1569 PGLPGPKGDIGPYGPVGPQGEKGESGQQGLTGAPGRDGASGLDGAPGLPGERGQKGDQGS 1628

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------GLDGIPGRNGMDGIPGK 222
            PG  G PG +G+         PG  G  G DGLPGE       GL+G PG  G  G  G 
Sbjct: 1629 PGLFGAPGQKGE---------PGLSGPSGLDGLPGEKGERGWDGLNGPPGSLGEKGDRGY 1679

Query: 223  DGLPGKDGIPGTNGTNGEKG------MTGPRGNR 250
             G+ G  G  G  G  GEKG        GP+G+R
Sbjct: 1680 TGVAGLIGAIGYVGQKGEKGDDCIEPPMGPKGDR 1713



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 105/249 (42%), Gaps = 47/249 (18%)

Query: 63  PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIP-LVAMQGFCNSTKEYCPPGLQGPIGQK 121
           P L  E  ++ +         P   L+     P L    G   +      PGL G +G+K
Sbjct: 744 PGLDGEKGQKGERGYPGVRGRPGDSLDGIPGAPGLPGEPGEPGTAGRDGTPGLPGMVGEK 803

Query: 122 GEIGAK------GEMGVKGERGEKGAPGVVGP---PGPQGIPGDEG------------KR 160
           G+IG +      G  G KG+ G  G PG+ GP   PG +G PG+ G              
Sbjct: 804 GDIGGRCQDCLPGLRGAKGDHGADGIPGLTGPRGPPGERGFPGEAGMDGLPGAIGPPGPP 863

Query: 161 GPKGDMGYPGPQGIPG------------DEGKRGPKGDMGY------------PGRIGLD 196
           G  G  G PGPQG PG            ++G +G +G+ G              GR G +
Sbjct: 864 GKDGIPGAPGPQGEPGTPATVTWNMLKLEKGDKGARGEFGRQGPPGPEGAPGEKGRPGFE 923

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  GL G PG  G PG++G+ G PG  G  G+ G+    G  GE G  G  G +G+ G+ 
Sbjct: 924 GFPGLKGTPGDRGFPGQDGVAGKPGIPGRKGEKGLS-VKGEPGEAGRPGSSGQKGEPGLY 982

Query: 257 GVPGTPAIC 265
           G  G P  C
Sbjct: 983 GQKGEPGQC 991



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 64/116 (55%), Gaps = 2/116 (1%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--GIPGDEGKRGPKGDMGYPGPQGIP 175
           +G KG  G  G  G KG++GE+G PGV G PG    GIPG  G  G  G+ G  G  G P
Sbjct: 735 MGPKGLDGLPGLDGEKGQKGERGYPGVRGRPGDSLDGIPGAPGLPGEPGEPGTAGRDGTP 794

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           G  G  G KGD+G   +  L G  G  G+ G DGIPG  G  G PG+ G PG+ G+
Sbjct: 795 GLPGMVGEKGDIGGRCQDCLPGLRGAKGDHGADGIPGLTGPRGPPGERGFPGEAGM 850



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 76/157 (48%), Gaps = 43/157 (27%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PKG--DMGYPGPQGI 174
           + GE+G KG PG+ G       PG  G RG                KG   MG  G  G+
Sbjct: 690 LPGEKGVKGEPGLTG------FPGGAGPRGFDGPPGPAGPRGPLGEKGLSRMGPKGLDGL 743

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGR--DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           PG +G++G KG+ GYPG  G  G   DG+PG PGL   PG       PG+ G  G+DG P
Sbjct: 744 PGLDGEKGQKGERGYPGVRGRPGDSLDGIPGAPGL---PGE------PGEPGTAGRDGTP 794

Query: 233 GTNGTNGEKG---------MTGPRGNRGKSGINGVPG 260
           G  G  GEKG         + G RG +G  G +G+PG
Sbjct: 795 GLPGMVGEKGDIGGRCQDCLPGLRGAKGDHGADGIPG 831



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 85/166 (51%), Gaps = 22/166 (13%)

Query: 112 PGLQGPIGQKGE--------IGAKGEMGVKGER---------GEKGAPGVVGPPGPQGIP 154
           PG  GP G+KG+        +G KGE G+ G R         G++G+ G+ G  GP G  
Sbjct: 421 PGTPGPKGEKGQPAYAGSFPVGQKGEPGMDGVRGPPGPPGLQGDRGSSGIKGERGPYGAS 480

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI----GLDGRDGLPGEPGLDGI 210
           G  G +G KG+MG  G +G+ GD+G++G  G  G    I    G+    G  GE G  G 
Sbjct: 481 GIPGPKGEKGNMGL-GFEGLKGDKGQKGEPGPPGTTAPIMPFQGVREVTGPQGESGHKGD 539

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G +G  G+ G  G  GIPG +G  GEKG+ G  G RG+ G +
Sbjct: 540 KGEMGPEGQKGEPGFIGDHGIPGGSGQKGEKGLPGAPGIRGRDGFS 585



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 12/102 (11%)

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG  G +GPKG  G+PG  GL G  G  G+PG  G+PG  G  G         K G+P
Sbjct: 323 GPPGILGPQGPKGQQGFPGTEGLLGPKGQKGDPGPQGLPGIKGDRG---------KMGMP 373

Query: 233 GTNGTNGEKGMTGPRGNR---GKSGINGVPGTPAICAYKRES 271
           G  G NG  G+ GP G+    G+ G NG  G P       ES
Sbjct: 374 GFPGINGVPGVQGPPGSTGLPGRDGCNGTDGAPGRKGIHGES 415



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 40/79 (50%), Gaps = 11/79 (13%)

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK--DGIPGTNGTNGEKGMTGPRGN 249
           R+G  G DGLPG   LDG  G+ G  G PG  G PG   DGIPG  G  GE G       
Sbjct: 734 RMGPKGLDGLPG---LDGEKGQKGERGYPGVRGRPGDSLDGIPGAPGLPGEPGEP----- 785

Query: 250 RGKSGINGVPGTPAICAYK 268
            G +G +G PG P +   K
Sbjct: 786 -GTAGRDGTPGLPGMVGEK 803


>gi|353229666|emb|CCD75837.1| hypothetical protein Smp_196840 [Schistosoma mansoni]
          Length = 1533

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/183 (43%), Positives = 96/183 (52%), Gaps = 39/183 (21%)

Query: 111 PPGLQG------PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           PPGL G      P G KGE G  G+ G+ G +G+KG  G  GP G QG+PG+EG RGP G
Sbjct: 270 PPGLDGSRGEPGPSGMKGEDGRPGDSGLIGLKGDKGELGPPGPKGDQGLPGEEGPRGPHG 329

Query: 165 DMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------- 211
           D+G  G  G+PG     G+ GP+G  G PG  G  GR G  GEPGL G+P          
Sbjct: 330 DIGDQGDPGLPGVRGPVGQPGPQGPRGKPGNQGPRGRKGELGEPGLPGLPGPAGPIGTSG 389

Query: 212 -----------------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                            GR+G  G+PG DGLP   G PG  G  G KG TGP G++G +G
Sbjct: 390 PEGMAGPRGPTGVAGQRGRSGPSGVPGTDGLP---GFPGPKGDVGPKGDTGPNGSKGDTG 446

Query: 255 ING 257
           I G
Sbjct: 447 IQG 449



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 98/192 (51%), Gaps = 21/192 (10%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ--- 151
            + G      E  PPG +G  G  GE G +G  G  G++G+ G PGV GP   PGPQ   
Sbjct: 296 GLIGLKGDKGELGPPGPKGDQGLPGEEGPRGPHGDIGDQGDPGLPGVRGPVGQPGPQGPR 355

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIP---------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G PG++G RG KG++G PG  G+P         G EG  GP+G  G  G+ G  G  G+P
Sbjct: 356 GKPGNQGPRGRKGELGEPGLPGLPGPAGPIGTSGPEGMAGPRGPTGVAGQRGRSGPSGVP 415

Query: 203 GEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN--- 256
           G  GL G PG     G  G  G +G  G  GI G  G  GE+G +GP G +G+SG     
Sbjct: 416 GTDGLPGFPGPKGDVGPKGDTGPNGSKGDTGIQGPRGYKGERGRSGPEGAKGESGKPGPV 475

Query: 257 GVPGTPAICAYK 268
           GVPG P     K
Sbjct: 476 GVPGDPGPKGVK 487



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 95/179 (53%), Gaps = 18/179 (10%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           QG  G  G  G++GE G  G +GE G PG  G  G +G  G+ G  GPKGD      QG+
Sbjct: 265 QGSSGPPGLDGSRGEPGPSGMKGEDGRPGDSGLIGLKGDKGELGPPGPKGD------QGL 318

Query: 175 PGDEGKRGPKGDM---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PG+EG RGP GD+   G PG  G+ G  G PG  G  G PG  G  G  G+ G PG  G+
Sbjct: 319 PGEEGPRGPHGDIGDQGDPGLPGVRGPVGQPGPQGPRGKPGNQGPRGRKGELGEPGLPGL 378

Query: 232 PGTN---GTNGEKGMTGPR------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
           PG     GT+G +GM GPR      G RG+SG +GVPGT  +  +      + P  +T 
Sbjct: 379 PGPAGPIGTSGPEGMAGPRGPTGVAGQRGRSGPSGVPGTDGLPGFPGPKGDVGPKGDTG 437



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 83/148 (56%), Gaps = 3/148 (2%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP+G  G  G +G  G+ G+ GE+G  G+VGP G +G+PG  G  G  G  G PG  G  
Sbjct: 842 GPVGSPGLPGIQGPPGLPGQAGEEGPEGLVGPEGSRGLPGAPGAPGMVGVTGLPGIAGEK 901

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---P 232
           GD+G +GP G  G PG +G+ G  G PG  G+ G  G+ G  G  G+DG PG  G+   P
Sbjct: 902 GDQGSQGPIGRRGLPGTVGVPGPAGQPGSVGVPGPVGQQGERGTQGEDGPPGPRGVEGSP 961

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G KG  GPRG +G  G  G PG
Sbjct: 962 GVQGPLGPKGQEGPRGPQGVPGDIGTPG 989



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 92/200 (46%), Gaps = 51/200 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGK 159
           PG  GP G KGE+G  GE+G  G++G +G  G++GP            PGP G+ G  G+
Sbjct: 724 PGRPGPAGVKGELGPDGEVGPIGDKGYQGDSGIIGPIGPTGPMGARGPPGPAGVKGLTGE 783

Query: 160 RGP---------------------------------KGDMGYPGPQGIPGDEGKRGPKGD 186
            GP                                 KG  G PGP+G  G  G RGP G 
Sbjct: 784 DGPLGLIGSPGPRGPPGRLGPIGPLGPPGFDGEKGDKGASGPPGPKGDKGGVGIRGPFGP 843

Query: 187 MGYPGRIGLDGRDGLPGEP------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           +G PG  G+ G  GLPG+       GL G  G  G+ G PG  G+ G  G+PG  G  G+
Sbjct: 844 VGSPGLPGIQGPPGLPGQAGEEGPEGLVGPEGSRGLPGAPGAPGMVGVTGLPGIAGEKGD 903

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           +G  GP G RG  G  GVPG
Sbjct: 904 QGSQGPIGRRGLPGTVGVPG 923



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 82/149 (55%), Gaps = 3/149 (2%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+KG+ GA G  G KG++G  G  G  GP G  G+PG +G  G  G  G  GP+G+ G E
Sbjct: 815 GEKGDKGASGPPGPKGDKGGVGIRGPFGPVGSPGLPGIQGPPGLPGQAGEEGPEGLVGPE 874

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G RG  G  G PG +G+ G  G+ GE G  G  G  G  G+PG  G+PG  G PG+ G  
Sbjct: 875 GSRGLPGAPGAPGMVGVTGLPGIAGEKGDQGSQGPIGRRGLPGTVGVPGPAGQPGSVGVP 934

Query: 239 GEKGMTGPRGNRGKS---GINGVPGTPAI 264
           G  G  G RG +G+    G  GV G+P +
Sbjct: 935 GPVGQQGERGTQGEDGPPGPRGVEGSPGV 963



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 90/214 (42%), Gaps = 66/214 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ GP GQ G +G  G +G +GERG +G  G  GP G +G PG +G  GPKG  G  GPQ
Sbjct: 920  GVPGPAGQPGSVGVPGPVGQQGERGTQGEDGPPGPRGVEGSPGVQGPLGPKGQEGPRGPQ 979

Query: 173  GIPGD---EGKRGPKGDMG------------------YPGRIGLD--------------- 196
            G+PGD    G  GPKG++G                    G +G D               
Sbjct: 980  GVPGDIGTPGPDGPKGELGPLGIPGPQGPTGPPGPKGVQGSVGEDGPPGPQGPLGKQGLR 1039

Query: 197  ------------------GRDGLPGEPGLDGIPGRNGMDGIPGKD------------GLP 226
                              GR G  G  G+ G  G  G+ G PG+             G P
Sbjct: 1040 GLPGPLGPPGPPGMTGPQGRTGPQGPKGMKGETGEQGVPGEPGRTGPVGSPGPPGSLGSP 1099

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G+PG  G  G+ G  G  G +GK G  G+PG
Sbjct: 1100 GQQGVPGVMGKQGKTGERGSEGLQGKQGDPGIPG 1133



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 68/125 (54%), Gaps = 6/125 (4%)

Query: 112 PGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GPIG    +G  G +G  GV G+RG  G  GV G  G  G PG +G  GPKGD   
Sbjct: 379 PGPAGPIGTSGPEGMAGPRGPTGVAGQRGRSGPSGVPGTDGLPGFPGPKGDVGPKGDT-- 436

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            GP G  GD G +GP+G  G  GR G +G  G  G+PG  G+PG  G  G+ G  G+ G 
Sbjct: 437 -GPNGSKGDTGIQGPRGYKGERGRSGPEGAKGESGKPGPVGVPGDPGPKGVKGDVGISGP 495

Query: 229 DGIPG 233
            G PG
Sbjct: 496 VGSPG 500



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 81/162 (50%), Gaps = 9/162 (5%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G++G +G  G  G  GERG  G PG +G      P G  G  G +G  GP G  G PG  
Sbjct: 629 GREGPVGFPGPRGEPGERGPAGQPGSLGNTGPPGPIGDPGPEGQQGPVGPTGPTGDPGKD 688

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG +G+ GPKG  G PG +G  G  G    PG DG+PGR G  G+ G+ G  G+ G  
Sbjct: 689 GMPGRDGQPGPKGVRGSPGVLGNQGVRGF---PGFDGMPGRPGPAGVKGELGPDGEVGPI 745

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G  G+ G+ GP G  G  G  G PG   +     E   L
Sbjct: 746 GDKGYQGDSGIIGPIGPTGPMGARGPPGPAGVKGLTGEDGPL 787



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 75/158 (47%), Gaps = 27/158 (17%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGPQ 151
           G      E  P GL GP G +G  GA G  G         + GE+G++G+ G +      
Sbjct: 857 GLPGQAGEEGPEGLVGPEGSRGLPGAPGAPGMVGVTGLPGIAGEKGDQGSQGPI------ 910

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                 G+RG  G +G PGP G PG  G  GP   +G  G  G  G DG PG  G++G P
Sbjct: 911 ------GRRGLPGTVGVPGPAGQPGSVGVPGP---VGQQGERGTQGEDGPPGPRGVEGSP 961

Query: 212 GRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKGMTGP 246
           G  G  G  G++G  G  G+P   GT G +G KG  GP
Sbjct: 962 GVQGPLGPKGQEGPRGPQGVPGDIGTPGPDGPKGELGP 999



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 85/215 (39%), Gaps = 51/215 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G +G  G  G  GV+G  G  G PG  GP G +G  G +G+ GP GD GY G  
Sbjct: 695 GQPGPKGVRGSPGVLGNQGVRGFPGFDGMPGRPGPAGVKGELGPDGEVGPIGDKGYQGDS 754

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGR---------------------------------D 199
           GI G  G  GP G  G PG  G+ G                                  D
Sbjct: 755 GIIGPIGPTGPMGARGPPGPAGVKGLTGEDGPLGLIGSPGPRGPPGRLGPIGPLGPPGFD 814

Query: 200 GLPGEPGLDGIPGRNGMD------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  G+ G  G PG  G              G PG  G+ G  G+PG  G  G +G+ GP 
Sbjct: 815 GEKGDKGASGPPGPKGDKGGVGIRGPFGPVGSPGLPGIQGPPGLPGQAGEEGPEGLVGPE 874

Query: 248 GNRGKSGINGVPGT------PAICAYKRESCSLLP 276
           G+RG  G  G PG       P I   K +  S  P
Sbjct: 875 GSRGLPGAPGAPGMVGVTGLPGIAGEKGDQGSQGP 909



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 47/82 (57%), Gaps = 3/82 (3%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIP 154
            + GF     +  P G  GP G KG+ G +G  G KGERG    +GA G  G PGP G+P
Sbjct: 419 GLPGFPGPKGDVGPKGDTGPNGSKGDTGIQGPRGYKGERGRSGPEGAKGESGKPGPVGVP 478

Query: 155 GDEGKRGPKGDMGYPGPQGIPG 176
           GD G +G KGD+G  GP G PG
Sbjct: 479 GDPGPKGVKGDVGISGPVGSPG 500



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 65/121 (53%), Gaps = 6/121 (4%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           +G +G+PGP+G PG+   RGP G  G  G  G  G  G PG  G  G  G  G  G PGK
Sbjct: 631 EGPVGFPGPRGEPGE---RGPAGQPGSLGNTGPPGPIGDPGPEGQQGPVGPTGPTGDPGK 687

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
           DG+PG+DG PG  G  G  G+ G +G RG  G +G+PG P     K E   L P+ E   
Sbjct: 688 DGMPGRDGQPGPKGVRGSPGVLGNQGVRGFPGFDGMPGRPGPAGVKGE---LGPDGEVGP 744

Query: 283 L 283
           +
Sbjct: 745 I 745



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G         P G+ G  G  G  G KG++G KG+ G  G+ G  G  GP+G  G+ G+ 
Sbjct: 401 GVAGQRGRSGPSGVPGTDGLPGFPGPKGDVGPKGDTGPNGSKGDTGIQGPRGYKGERGRS 460

Query: 161 GP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           GP   KG+ G PGP G+PGD G +G KGD+G  G +G  G
Sbjct: 461 GPEGAKGESGKPGPVGVPGDPGPKGVKGDVGISGPVGSPG 500



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 86/222 (38%), Gaps = 63/222 (28%)

Query: 112 PGLQGPIGQKGEIGAK------------------GEMGVKGERGEKGAPGVVGPPGPQGI 153
           PG +GP GQ G +G                    G  G  G+ G+ G PG  G PGP+G+
Sbjct: 643 PGERGPAGQPGSLGNTGPPGPIGDPGPEGQQGPVGPTGPTGDPGKDGMPGRDGQPGPKGV 702

Query: 154 PGDEGKRGPKGDMGYPGPQGIP------------GDEGKRGPKGDMGYPGRIGLDGRDGL 201
            G  G  G +G  G+PG  G+P            G +G+ GP GD GY G  G+ G  G 
Sbjct: 703 RGSPGVLGNQGVRGFPGFDGMPGRPGPAGVKGELGPDGEVGPIGDKGYQGDSGIIGPIGP 762

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGL---------------------------------PGK 228
            G  G  G PG  G+ G+ G+DG                                   G 
Sbjct: 763 TGPMGARGPPGPAGVKGLTGEDGPLGLIGSPGPRGPPGRLGPIGPLGPPGFDGEKGDKGA 822

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G PG  G  G  G+ GP G  G  G+ G+ G P +     E
Sbjct: 823 SGPPGPKGDKGGVGIRGPFGPVGSPGLPGIQGPPGLPGQAGE 864



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 70/137 (51%), Gaps = 18/137 (13%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPG---------------VVGPPGPQGIP---GDEGKRGP 162
            +G  G +G  G+KGE GE+G PG                +G PG QG+P   G +GK G 
Sbjct: 1057 QGRTGPQGPKGMKGETGEQGVPGEPGRTGPVGSPGPPGSLGSPGQQGVPGVMGKQGKTGE 1116

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            +G  G  G QG PG  G RGPKG  G  G +G  G  G  GE G+ G+ G  G+ G+ G+
Sbjct: 1117 RGSEGLQGKQGDPGIPGDRGPKGSKGTYGPVGPLGPPGPKGEQGVPGLEGARGVVGLKGE 1176

Query: 223  DGLPGKDGIPGTNGTNG 239
             G  G  G PG  G +G
Sbjct: 1177 RGPVGPAGDPGQPGPSG 1193



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 61/136 (44%), Gaps = 33/136 (24%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGK------------------RGPKGDMGYPGRIGLD 196
            G  G +GPKG  G  G QG+PG+ G+                  +G  G MG  G+ G  
Sbjct: 1058 GRTGPQGPKGMKGETGEQGVPGEPGRTGPVGSPGPPGSLGSPGQQGVPGVMGKQGKTGER 1117

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPG---------------KDGLPGKDGIPGTNGTNGEK 241
            G +GL G+ G  GIPG  G  G  G               + G+PG +G  G  G  GE+
Sbjct: 1118 GSEGLQGKQGDPGIPGDRGPKGSKGTYGPVGPLGPPGPKGEQGVPGLEGARGVVGLKGER 1177

Query: 242  GMTGPRGNRGKSGING 257
            G  GP G+ G+ G +G
Sbjct: 1178 GPVGPAGDPGQPGPSG 1193



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 18/98 (18%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------- 164
            +G  G+ G  G MG +G+ GE+G+ G+ G  G  GIPGD G +G KG             
Sbjct: 1096 LGSPGQQGVPGVMGKQGKTGERGSEGLQGKQGDPGIPGDRGPKGSKGTYGPVGPLGPPGP 1155

Query: 165  --DMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
              + G P   G +G+ G +G+RGP G  G PG+ G  G
Sbjct: 1156 KGEQGVPGLEGARGVVGLKGERGPVGPAGDPGQPGPSG 1193


>gi|348519926|ref|XP_003447480.1| PREDICTED: collagen alpha-2(VI) chain-like [Oreochromis niloticus]
          Length = 997

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 88/200 (44%), Gaps = 48/200 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL+GP G KG  G  G  G KGERG +G PG+ GP G  G  G+ G RG KG++G  G 
Sbjct: 234 PGLRGPSGPKGTKGDTGPPGPKGERGRQGDPGIEGPIGRPGPKGEPGLRGDKGEIGLTGA 293

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP-------------------- 211
           +G+ G  GK G  G  G  GRIG  G  G PG+ G DG P                    
Sbjct: 294 KGVAGSTGKNGTDGQKGKIGRIGTPGCKGDPGDKGPDGYPGDVGETGPLGDKGEKGDMGL 353

Query: 212 -------------------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---------GM 243
                              G  G  G PG+ G PG+ G PG  G  G +         G 
Sbjct: 354 PGKPGPPGPKGNPGPKGERGSQGNPGQPGQRGSPGRKGSPGAKGEQGRRGNPGVKGAQGN 413

Query: 244 TGPRGNRGKSGINGVPGTPA 263
           TGP+G +G+ G  G  G P 
Sbjct: 414 TGPKGTKGERGPEGSRGRPG 433



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 86/170 (50%), Gaps = 18/170 (10%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G +G  G+ G  GAKGE+G+ G RG+ G PG  G  G  G PGD G   P+GD G
Sbjct: 422 ERGPEGSRGRPGENGLKGAKGELGLPGPRGQPGEPGTSGRNGTMGDPGDSG---PRGDTG 478

Query: 168 YPGPQGIPGDEG-----KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             GP+G  G +G      RGP GD G PGR G  G     G+ G  G  G  G  G PG+
Sbjct: 479 PLGPKGDRGRQGFSYPGSRGPPGDRGAPGRRGPTGSR---GDCGAKGESGNKGPSGAPGE 535

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
              PG+ G PG  G  GE+G  G  G  G SG+        +  Y RE+C
Sbjct: 536 ---PGQSGPPGERGPRGERGPDGDSGPAGDSGLTEC----DVMNYIRETC 578



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 88/177 (49%), Gaps = 27/177 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------KGD 165
           PG++GPIG+ G  G  G  G KGE G  GA GV G  G  G  G +GK G       KGD
Sbjct: 264 PGIEGPIGRPGPKGEPGLRGDKGEIGLTGAKGVAGSTGKNGTDGQKGKIGRIGTPGCKGD 323

Query: 166 MGYPGPQGIPGDEGKRGP------KGDMGYPGRIGLD------------GRDGLPGEPGL 207
            G  GP G PGD G+ GP      KGDMG PG+ G              G  G PG+PG 
Sbjct: 324 PGDKGPDGYPGDVGETGPLGDKGEKGDMGLPGKPGPPGPKGNPGPKGERGSQGNPGQPGQ 383

Query: 208 DGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PGR G  G  G+ G    PG  G  G  G  G KG  GP G+RG+ G NG+ G 
Sbjct: 384 RGSPGRKGSPGAKGEQGRRGNPGVKGAQGNTGPKGTKGERGPEGSRGRPGENGLKGA 440



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 80/165 (48%), Gaps = 23/165 (13%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G  GQ+G  G KG  G KGE+G +G PGV G  G  G  G +G+RGP+G  G PG  G+ 
Sbjct: 379 GQPGQRGSPGRKGSPGAKGEQGRRGNPGVKGAQGNTGPKGTKGERGPEGSRGRPGENGL- 437

Query: 176 GDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPGRNGMDG----------- 218
                +G KG++G       PG  G  GR+G  G+PG  G  G  G  G           
Sbjct: 438 -----KGAKGELGLPGPRGQPGEPGTSGRNGTMGDPGDSGPRGDTGPLGPKGDRGRQGFS 492

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            PG  G PG  G PG  G  G +G  G +G  G  G +G PG P 
Sbjct: 493 YPGSRGPPGDRGAPGRRGPTGSRGDCGAKGESGNKGPSGAPGEPG 537



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 86/169 (50%), Gaps = 24/169 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG---------------------EKGAPGVVGPPGP 150
           PG +GP G  G++G  G +G KGE+G                     E+G+ G  G PG 
Sbjct: 324 PGDKGPDGYPGDVGETGPLGDKGEKGDMGLPGKPGPPGPKGNPGPKGERGSQGNPGQPGQ 383

Query: 151 QGIPGDEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           +G PG +G  G KG+ G    PG +G  G+ G +G KG+ G  G  G  G +GL G  G 
Sbjct: 384 RGSPGRKGSPGAKGEQGRRGNPGVKGAQGNTGPKGTKGERGPEGSRGRPGENGLKGAKGE 443

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G+PG  G  G PG  G  G  G PG +G  G+ G  GP+G+RG+ G +
Sbjct: 444 LGLPGPRGQPGEPGTSGRNGTMGDPGDSGPRGDTGPLGPKGDRGRQGFS 492



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 68/121 (56%), Gaps = 9/121 (7%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G PG+ GP GP+G  GD G  GPKG+ G  G  GI G  G+ GPKG+   PG  G  G  
Sbjct: 232 GRPGLRGPSGPKGTKGDTGPPGPKGERGRQGDPGIEGPIGRPGPKGE---PGLRGDKGEI 288

Query: 200 GLPGEPGLDGIPGRNGMDGIPGK---DGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKS 253
           GL G  G+ G  G+NG DG  GK    G PG  G PG  G +   G+ G TGP G++G+ 
Sbjct: 289 GLTGAKGVAGSTGKNGTDGQKGKIGRIGTPGCKGDPGDKGPDGYPGDVGETGPLGDKGEK 348

Query: 254 G 254
           G
Sbjct: 349 G 349


>gi|327267097|ref|XP_003218339.1| PREDICTED: collagen alpha-3(IV) chain-like [Anolis carolinensis]
          Length = 1418

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 91/169 (53%), Gaps = 27/169 (15%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +G +G+ GE G+ GE+GE+G PG+ GPPG QG  G +G RG  G  G PG +G+PG  
Sbjct: 542 GAQGRLGSPGEEGMPGEKGERGFPGLQGPPGQQGQDGADGPRGEPGSPGVPGEKGVPGKM 601

Query: 179 G-----------------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           G                         G KGD G PG   LD   G PG+ GL GIPG  G
Sbjct: 602 GDCLVGLPGPPGPCGVVGPPGGRGAIGAKGDPGIPG---LD-IPGFPGQFGLPGIPGPQG 657

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            DG PG  G PG+ G+PG  G  GE G+ GP GN G SG+ G PG P I
Sbjct: 658 NDGPPGNKGQPGRPGVPGIPGPRGEMGLMGPVGNPGLSGVPGNPGIPGI 706



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 94/184 (51%), Gaps = 32/184 (17%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGE-------KGAPGVVGP---PGPQGIPGDEG 158
           Y P GL+G  G +G+ G  G  G  G +G+        GAPG+ GP   PG QG+ G  G
Sbjct: 410 YGPQGLKGSQGTQGDPGPSGLPGTSGPKGDPGMVIAIPGAPGLQGPAGRPGLQGVRGSVG 469

Query: 159 KRGPKGDMGYPGPQ-----------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            RG +GD G PGP            G PG +G +G +G  G PG  G  G  GLPG PG+
Sbjct: 470 SRGQRGDPGLPGPDGDPGLVQIGFPGYPGLKGDKGLQGSTGPPGCPGTLGEPGLPGRPGI 529

Query: 208 DG--------IPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G        IPG  G  G PG++G+PG+    G PG  G  G++G  G  G RG+ G  
Sbjct: 530 SGEKGEPGPFIPGAQGRLGSPGEEGMPGEKGERGFPGLQGPPGQQGQDGADGPRGEPGSP 589

Query: 257 GVPG 260
           GVPG
Sbjct: 590 GVPG 593



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 90/179 (50%), Gaps = 16/179 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +G +G +G  G KG+ G +G  G  G PG VG  GP G  G +G +G +G  G PGP 
Sbjct: 370 GTRGSVGAQGSDGPKGDRGPQGSSGSPGLPGEVGLSGPPGY-GPQGLKGSQGTQGDPGPS 428

Query: 173 GIPGDEGKRGPKGDMGY----PGRIGLDGRDGLPGEPGLDGIPGRNGM---DGIPGKDGL 225
           G+PG  G   PKGD G     PG  GL G  G PG  G+ G  G  G     G+PG DG 
Sbjct: 429 GLPGTSG---PKGDPGMVIAIPGAPGLQGPAGRPGLQGVRGSVGSRGQRGDPGLPGPDGD 485

Query: 226 PGK-----DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
           PG       G PG  G  G +G TGP G  G  G  G+PG P I   K E    +P ++
Sbjct: 486 PGLVQIGFPGYPGLKGDKGLQGSTGPPGCPGTLGEPGLPGRPGISGEKGEPGPFIPGAQ 544



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 86/179 (48%), Gaps = 46/179 (25%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGP-----------PGPQGIPGDEGKRGPKGDMGYPG 170
           GE G KG +G+ G +GE GAPG  GP           PGP+G+PG  G RG KGD G PG
Sbjct: 231 GEKGNKGYIGLPGLKGEPGAPGPRGPDGAIGRPGISRPGPRGLPGSPGVRGKKGDRGQPG 290

Query: 171 --------------------------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                                       GI G++G+   KG  G P  +  +G  G  GE
Sbjct: 291 MNAIGPPGPPGMPGLPGPAGSPGLSGQPGIQGNQGR---KGSKGVPAYVDPEGPRGDRGE 347

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            GL G  G  GM      DGLPG+ G+ GT G+ G +G  GP+G+RG  G +G PG P 
Sbjct: 348 AGLRGTSGERGM------DGLPGEPGLKGTRGSVGAQGSDGPKGDRGPQGSSGSPGLPG 400



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 90/179 (50%), Gaps = 44/179 (24%)

Query: 118  IGQKGEIGAKGEMGVKGE------------RGEKGAPGVVGPPGPQGIPGDEGKRGPK-- 163
             G  GE G KGE G  G+            RG+ G+PG+ G PGP    GD G++G K  
Sbjct: 861  AGLPGERGQKGEKGSPGQPGLIGEPGRQGNRGDAGSPGIPGFPGPA---GDNGRKGSKGL 917

Query: 164  ----GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                G  GYPGP G+ GD+G  G KG+ G       DG  G PGE G  GI G  GM G+
Sbjct: 918  PGQNGIKGYPGPSGLSGDDGPVGEKGNQGR------DGIPGHPGEKGEQGIKGSMGMAGV 971

Query: 220  PGKDGLPGKDGI------------PGTNGTNGEKGM--TGPRGNRGKSGINGVPGTPAI 264
            PG+   PG  G+            PG  G +G+ GM   GP+GNRG  G++G PG P I
Sbjct: 972  PGR---PGAKGLRGDPGPRGPPGIPGQTGPSGKPGMAVAGPKGNRGLPGLDGKPGVPGI 1027



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 91/190 (47%), Gaps = 25/190 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE-----RGEKGAPGVVGPPGP 150
           L   +G   +     P G +GP G  G  G  GE+G+ G      +G KG+ G  G PGP
Sbjct: 368 LKGTRGSVGAQGSDGPKGDRGPQGSSGSPGLPGEVGLSGPPGYGPQGLKGSQGTQGDPGP 427

Query: 151 QGIPGDEGKRGP-------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            G+PG  G +G              +G  G PG QG+ G  G RG +GD G PG  G  G
Sbjct: 428 SGLPGTSGPKGDPGMVIAIPGAPGLQGPAGRPGLQGVRGSVGSRGQRGDPGLPGPDGDPG 487

Query: 198 --RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP-----RGNR 250
             + G PG PGL G  G  G  G PG  G  G+ G+PG  G +GEKG  GP     +G  
Sbjct: 488 LVQIGFPGYPGLKGDKGLQGSTGPPGCPGTLGEPGLPGRPGISGEKGEPGPFIPGAQGRL 547

Query: 251 GKSGINGVPG 260
           G  G  G+PG
Sbjct: 548 GSPGEEGMPG 557



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 89/179 (49%), Gaps = 35/179 (19%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGE-----RGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PPGLQG  G++G  G  G+ G+K E      GEKG  G +G PG +G PG  G RGP G 
Sbjct: 200 PPGLQGEKGEQGFPGLPGKDGLKIEYYDEMPGEKGNKGYIGLPGLKGEPGAPGPRGPDGA 259

Query: 166 MGYPG-----PQGIPGDEGKRGPKGDMGYPGRIGLDG--------------RDGLPGEPG 206
           +G PG     P+G+PG  G RG KGD G PG   +                  GL G+PG
Sbjct: 260 IGRPGISRPGPRGLPGSPGVRGKKGDRGQPGMNAIGPPGPPGMPGLPGPAGSPGLSGQPG 319

Query: 207 LDGIPGRNGMDGIPG-KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           + G  GR G  G+P   D            G  G++G  G RG  G+ G++G+PG P +
Sbjct: 320 IQGNQGRKGSKGVPAYVD----------PEGPRGDRGEAGLRGTSGERGMDGLPGEPGL 368



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 103/245 (42%), Gaps = 73/245 (29%)

Query: 89  NAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA------------KGEMGVKGE- 135
            A  R+     +G      E   PGLQGP GQ+G+ GA             GE GV G+ 
Sbjct: 542 GAQGRLGSPGEEGMPGEKGERGFPGLQGPPGQQGQDGADGPRGEPGSPGVPGEKGVPGKM 601

Query: 136 ----------------------------RGEKGAPG--VVGPPGP---QGIPGDEGKRGP 162
                                       +G+ G PG  + G PG     GIPG +G  GP
Sbjct: 602 GDCLVGLPGPPGPCGVVGPPGGRGAIGAKGDPGIPGLDIPGFPGQFGLPGIPGPQGNDGP 661

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI--- 219
            G+ G PG  G+PG  G RG  G MG  G  GL G  G PG PG+ G PG +G+ G    
Sbjct: 662 PGNKGQPGRPGVPGIPGPRGEMGLMGPVGNPGLSGVPGNPGIPGIRGSPGFSGLKGRKGS 721

Query: 220 ------PGKDGLP---------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                 PG  G P               G  G PG  G  GEKG    +G +G +G+NG+
Sbjct: 722 SGEKGEPGDKGFPGISESIMHSGDKGDRGAKGFPGRMGLKGEKGE---QGAQGCAGLNGI 778

Query: 259 PGTPA 263
           PGTPA
Sbjct: 779 PGTPA 783



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/153 (39%), Positives = 76/153 (49%), Gaps = 32/153 (20%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG--------------DMGYPGPQGIPG 176
           G++GERG  G PG  G PG  G PG  G +G                 D G PG      
Sbjct: 812 GIRGERGSPGLPGSSGLPGSPGTPGMPGDKGEAACPGTGPPGNPGPKGDAGLPG------ 865

Query: 177 DEGKRGPKGDMGYPGRIGL------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              +RG KG+ G PG+ GL       G  G  G PG+ G PG  G +G  G  GLPG++G
Sbjct: 866 ---ERGQKGEKGSPGQPGLIGEPGRQGNRGDAGSPGIPGFPGPAGDNGRKGSKGLPGQNG 922

Query: 231 I---PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           I   PG +G +G+ G  G +GN+G+ GI G PG
Sbjct: 923 IKGYPGPSGLSGDDGPVGEKGNQGRDGIPGHPG 955



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 82/158 (51%), Gaps = 24/158 (15%)

Query: 125 GAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  G+ G++G +G KG+ GV   V P GP+G  G+ G RG  G+ G  G  G PG +G R
Sbjct: 313 GLSGQPGIQGNQGRKGSKGVPAYVDPEGPRGDRGEAGLRGTSGERGMDGLPGEPGLKGTR 372

Query: 182 ---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP--GRNGMDGIPGKDGLPGKDG 230
                    GPKGD G     G  G  GLPGE GL G P  G  G+ G  G  G PG  G
Sbjct: 373 GSVGAQGSDGPKGDRGP---QGSSGSPGLPGEVGLSGPPGYGPQGLKGSQGTQGDPGPSG 429

Query: 231 IPGTNGTNGEKGMT-------GPRGNRGKSGINGVPGT 261
           +PGT+G  G+ GM        G +G  G+ G+ GV G+
Sbjct: 430 LPGTSGPKGDPGMVIAIPGAPGLQGPAGRPGLQGVRGS 467



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 88/210 (41%), Gaps = 64/210 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G+ G +G  G  G+ G  G  G PG+ G PG  G+   +G++G  G+ G PG 
Sbjct: 674 PGIPGPRGEMGLMGPVGNPGLSGVPGNPGIPGIRGSPGFSGL---KGRKGSSGEKGEPGD 730

Query: 172 QGIPG------DEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIP----------- 211
           +G PG        G +G +G  G+PGR+GL G  G  G     GL+GIP           
Sbjct: 731 KGFPGISESIMHSGDKGDRGAKGFPGRMGLKGEKGEQGAQGCAGLNGIPGTPAPTDLVMQ 790

Query: 212 ------------------------GRNGMDGIPGKDGLPGKDGIPGTNGTNGE------- 240
                                   G  G  G+PG  GLPG  G PG  G  GE       
Sbjct: 791 FLLLNKQSTNIQFESNVYITSGIRGERGSPGLPGSSGLPGSPGTPGMPGDKGEAACPGTG 850

Query: 241 ----------KGMTGPRGNRGKSGINGVPG 260
                      G+ G RG +G+ G  G PG
Sbjct: 851 PPGNPGPKGDAGLPGERGQKGEKGSPGQPG 880


>gi|123703924|ref|NP_001074044.1| collagen alpha-1(XXVII) chain B precursor [Danio rerio]
 gi|166218146|sp|A0MSJ1.1|CRA1B_DANRE RecName: Full=Collagen alpha-1(XXVII) chain B; Flags: Precursor
 gi|117169176|gb|ABK32518.1| procollagen type XXVII alpha I b [Danio rerio]
          Length = 1658

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 102/177 (57%), Gaps = 27/177 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            P G  GP+G +G+ G  G+       GV+GERG++GAPGV G  GP+G PG +G +G KG
Sbjct: 1143 PSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKG 1202

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---G 221
              G   P+   G+ G RG  G +G PG  G+ GR+G  GEPGLDG  G++G  G+P   G
Sbjct: 1203 PKGKNSPR---GESGNRGSPGPVGVPGPRGVIGREGFEGEPGLDGAAGKDGAKGMPGDLG 1259

Query: 222  KD---GLPGK---------DGIPGTNGT---NGEKGMTGPRGNRGKSGINGVPGTPA 263
            +D   GLPGK          G+PG  G+    GE+G+TG  G  GK G+NG  G P 
Sbjct: 1260 RDGDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGITGHSGPPGKRGLNGGMGFPG 1316



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 101/202 (50%), Gaps = 48/202 (23%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRG 161
           PPGL   IG KG  G  GE G+KG++GE G PG  G PG QG         +PG +GK G
Sbjct: 632 PPGL---IGPKGVPGNPGEPGLKGDKGELGLPGEPGEPGFQGDKGIQGSPGLPGVQGKPG 688

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------------- 199
           P+G +G  GP G+PG  G  G  GD+G PG+ G++G                        
Sbjct: 689 PQGKIGDRGPDGLPGPLGPEGFPGDIGPPGQNGVEGPKGNAGVRGIPGPGGLPGLEGDQG 748

Query: 200 --GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------------GMTG 245
             G  G PGL+G PGR G+ G PG++G+ G+ G+ G  G  GE+            G+ G
Sbjct: 749 PVGPAGAPGLEGRPGRKGISGNPGEEGMKGEPGMTGNPGMLGERGPVGFVGPFGEMGLAG 808

Query: 246 PRGNRGKSGINGVPGTPAICAY 267
            +G+RG++G  G PG      +
Sbjct: 809 EKGDRGETGQPGPPGEKGAMGH 830



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 87/157 (55%), Gaps = 6/157 (3%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMG 167
            P G  GP G KG  G KG+   +GE G +G+PG VG PGP+G+ G    EG+ G  G  G
Sbjct: 1188 PRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGEPGLDGAAG 1247

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
              G +G+PGD G+    GD+G PG+ G  G  G PG PG+ G  G  G  GI G  G PG
Sbjct: 1248 KDGAKGMPGDLGR---DGDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGITGHSGPPG 1304

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            K G+ G  G  G++G  G +G  G +G  G PG   I
Sbjct: 1305 KRGLNGGMGFPGKQGDQGFKGQPGDAGEQGFPGVLGI 1341



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/163 (46%), Positives = 89/163 (54%), Gaps = 15/163 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GPIG  G  G +G +G+ G         ERG  G PG  G  G  G PGD G+RGP 
Sbjct: 541 GLPGPIGNMGPKGVRGFIGIPGIFGLPGADGERGLPGVPGKKGKMGRPGFPGDFGERGPP 600

Query: 164 G------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G      ++G PGP GIPG  G  GP G +G PG IG  G  G PGEPGL G  G  G+ 
Sbjct: 601 GPDGNPGEIGAPGPVGIPGFIGDMGPVGMVGPPGLIGPKGVPGNPGEPGLKGDKGELGLP 660

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG+ G  G  GI G+ G  G +G  GP+G  G  G +G+PG
Sbjct: 661 GEPGEPGFQGDKGIQGSPGLPGVQGKPGPQGKIGDRGPDGLPG 703



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 84/167 (50%), Gaps = 21/167 (12%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGYPGPQGIPGDEGKR 181
           G  G +G+ G+ G+ G  G  G PGP G PGD+G RGP G     GYPG QG+PG  G  
Sbjct: 490 GDPGLVGLPGQPGQPGRKGQKGHPGPSGHPGDQGIRGPDGSPGAKGYPGRQGLPGPIGNM 549

Query: 182 GPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---------------KD 223
           GPKG  G+   PG  GL G DG  G PG+ G  G+ G  G PG               + 
Sbjct: 550 GPKGVRGFIGIPGIFGLPGADGERGLPGVPGKKGKMGRPGFPGDFGERGPPGPDGNPGEI 609

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G PG  GIPG  G  G  GM GP G  G  G+ G PG P +   K E
Sbjct: 610 GAPGPVGIPGFIGDMGPVGMVGPPGLIGPKGVPGNPGEPGLKGDKGE 656



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 88/173 (50%), Gaps = 6/173 (3%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------VKGERGEKGAPGVVGPPGP 150
            V  +G         PPG QG  GQ G+IG  GE G      V+G  G  GA G++G PGP
Sbjct: 873  VGEKGMMGMKGPEGPPGKQGLSGQMGKIGETGEAGPTGFTGVQGPTGPPGAKGILGEPGP 932

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            QG PG  G  G  G +G PG  G  G  G+ G KG +G PG IG  G  G  G+PG+DG 
Sbjct: 933  QGSPGVLGPLGEIGAIGLPGKAGDQGLPGEPGEKGAVGSPGNIGEQGLIGPRGDPGVDGE 992

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G +G DG  G+ G  G +G  G  G  G KG  G  G+ G  G+ G  G P 
Sbjct: 993  AGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKPG 1045



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 92/175 (52%), Gaps = 18/175 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------GPQGIPGDEGKRGP 162
            PG+ GP+G+ G IG  G+ G +G  GE G  G VG P         GP+G PG +G+ GP
Sbjct: 936  PGVLGPLGEIGAIGLPGKAGDQGLPGEPGEKGAVGSPGNIGEQGLIGPRGDPGVDGEAGP 995

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G  G  G QG  G EG+ G KG +G+ G  G  G  GL G  G +G PG+ G  G PG+
Sbjct: 996  SGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKPGKIGERGKPGE 1055

Query: 223  DGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPGT------PAICAYK 268
             G  G  G  G  G  GE+G T   GP+G+RG +G  G PG       P +  Y+
Sbjct: 1056 KGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGAPGKMGQQGEPGLVGYE 1110



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 91/177 (51%), Gaps = 7/177 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
           PG+ G  G  G +G  GEMG+ GE+G++G  G  GPPG +G    PG  G+RG  G  G 
Sbjct: 786 PGMLGERGPVGFVGPFGEMGLAGEKGDRGETGQPGPPGEKGAMGHPGAPGERGLSGPAGA 845

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP G  G  G RGPKG  G  G  G  G  G+ G  G +G PG+ G+ G  GK    G+
Sbjct: 846 PGPHGSRGLSGTRGPKGTRGARGPDGPVGEKGMMGMKGPEGPPGKQGLSGQMGKI---GE 902

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL-LPNSETSQLL 284
            G  G  G  G +G TGP G +G  G  G  G+P +     E  ++ LP     Q L
Sbjct: 903 TGEAGPTGFTGVQGPTGPPGAKGILGEPGPQGSPGVLGPLGEIGAIGLPGKAGDQGL 959



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            M G      E  P G  GP G+    GE G +GE G  G  GEKGA G  G PG +G+ 
Sbjct: 781 GMTGNPGMLGERGPVGFVGPFGEMGLAGEKGDRGETGQPGPPGEKGAMGHPGAPGERGLS 840

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR- 213
           G  G  GP G  G  G +G  G  G RGP G +G  G +G+ G +G PG+ GL G  G+ 
Sbjct: 841 GPAGAPGPHGSRGLSGTRGPKGTRGARGPDGPVGEKGMMGMKGPEGPPGKQGLSGQMGKI 900

Query: 214 --------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------RGKSGINGVP 259
                    G  G+ G  G PG  GI G  G  G  G+ GP G        GK+G  G+P
Sbjct: 901 GETGEAGPTGFTGVQGPTGPPGAKGILGEPGPQGSPGVLGPLGEIGAIGLPGKAGDQGLP 960

Query: 260 GTPA 263
           G P 
Sbjct: 961 GEPG 964



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 92/199 (46%), Gaps = 15/199 (7%)

Query: 81  HNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPG---------------LQGPIGQKGEIG 125
              P  ++  +  + L   +G    T +  PPG               L GP G  G  G
Sbjct: 791 ERGPVGFVGPFGEMGLAGEKGDRGETGQPGPPGEKGAMGHPGAPGERGLSGPAGAPGPHG 850

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           ++G  G +G +G +GA G  GP G +G+ G +G  GP G  G  G  G  G+ G+ GP G
Sbjct: 851 SRGLSGTRGPKGTRGARGPDGPVGEKGMMGMKGPEGPPGKQGLSGQMGKIGETGEAGPTG 910

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G  G  G  G  G+ GEPG  G PG  G  G  G  GLPGK G  G  G  GEKG  G
Sbjct: 911 FTGVQGPTGPPGAKGILGEPGPQGSPGVLGPLGEIGAIGLPGKAGDQGLPGEPGEKGAVG 970

Query: 246 PRGNRGKSGINGVPGTPAI 264
             GN G+ G+ G  G P +
Sbjct: 971 SPGNIGEQGLIGPRGDPGV 989



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 84/159 (52%), Gaps = 8/159 (5%)

Query: 107  KEYCP--PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            KE  P  PG  GP G  G  G+KG  G KG+   +G  G  G PGP G+P      GP+G
Sbjct: 1176 KEGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVP------GPRG 1229

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             +G  G +G PG +G  G  G  G PG +G DG  GLPG+PG  G  G  G+ G+ G  G
Sbjct: 1230 VIGREGFEGEPGLDGAAGKDGAKGMPGDLGRDGDVGLPGKPGPQGNAGAPGLPGVQGSFG 1289

Query: 225  LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G+ GI G +G  G++G+ G  G  GK G  G  G P 
Sbjct: 1290 PKGERGITGHSGPPGKRGLNGGMGFPGKQGDQGFKGQPG 1328



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 87/175 (49%), Gaps = 21/175 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVK---------------GERGEKGAPGVVGPPGPQGIPGD 156
           PG  GP GQ G  G KG  GV+               G  G  GAPG+ G PG +GI G+
Sbjct: 711 PGDIGPPGQNGVEGPKGNAGVRGIPGPGGLPGLEGDQGPVGPAGAPGLEGRPGRKGISGN 770

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G+ G KG+   PG  G PG  G+RGP G +G  G +GL G  G  GE G  G PG  G 
Sbjct: 771 PGEEGMKGE---PGMTGNPGMLGERGPVGFVGPFGEMGLAGEKGDRGETGQPGPPGEKGA 827

Query: 217 ---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
               G PG+ GL G  G PG +G+ G  G  GP+G RG  G +G  G   +   K
Sbjct: 828 MGHPGAPGERGLSGPAGAPGPHGSRGLSGTRGPKGTRGARGPDGPVGEKGMMGMK 882



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 89/166 (53%), Gaps = 18/166 (10%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGK---RGPKGDMGYPGPQGIPG 176
           EIGA G +G+ G  G+ G  G+VGPPG   P+G+PG+ G+   +G KG++G PG  G PG
Sbjct: 608 EIGAPGPVGIPGFIGDMGPVGMVGPPGLIGPKGVPGNPGEPGLKGDKGELGLPGEPGEPG 667

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
            +G +G +G  G PG  G  G  G  G+ G DG+PG  G +G PG  G PG++G+ G  G
Sbjct: 668 FQGDKGIQGSPGLPGVQGKPGPQGKIGDRGPDGLPGPLGPEGFPGDIGPPGQNGVEGPKG 727

Query: 237 TNGEKGMT------------GPRGNRGKSGINGVPGTPAICAYKRE 270
             G +G+             GP G  G  G+ G PG   I     E
Sbjct: 728 NAGVRGIPGPGGLPGLEGDQGPVGPAGAPGLEGRPGRKGISGNPGE 773



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 86/183 (46%), Gaps = 33/183 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
           PG+QG  G +G+IG +G  G+ G  G +G PG +GPPG  G+ G +G  G +        
Sbjct: 681 PGVQGKPGPQGKIGDRGPDGLPGPLGPEGFPGDIGPPGQNGVEGPKGNAGVRGIPGPGGL 740

Query: 164 ----GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------ 207
               GD G  GP G PG EG+ G KG  G PG  G+ G  G+ G PG+            
Sbjct: 741 PGLEGDQGPVGPAGAPGLEGRPGRKGISGNPGEEGMKGEPGMTGNPGMLGERGPVGFVGP 800

Query: 208 ---------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                     G  G  G  G PG+ G  G  G PG  G +G  G  GP G+RG SG  G 
Sbjct: 801 FGEMGLAGEKGDRGETGQPGPPGEKGAMGHPGAPGERGLSGPAGAPGPHGSRGLSGTRGP 860

Query: 259 PGT 261
            GT
Sbjct: 861 KGT 863



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 91/194 (46%), Gaps = 19/194 (9%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPG 149
            L+  +G      E  P G  G  G++G++G +GE      +G KG  G  G PG++G  G
Sbjct: 980  LIGPRGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKG 1039

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            P+G PG  G+RG  G+ G  G QG  G+ G  G +GD G+ G  G  G  G  G PG  G
Sbjct: 1040 PEGKPGKIGERGKPGEKGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGAPGKMG 1099

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK-------------GMTGPRGNRGKSGIN 256
              G  G+ G  G  G  G  G PG  G  GE+             G  GP GNRG  G  
Sbjct: 1100 QQGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGEP 1159

Query: 257  GVPGTPAICAYKRE 270
            G PG P +   + E
Sbjct: 1160 GDPGYPGLEGVQGE 1173



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 88/186 (47%), Gaps = 45/186 (24%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-------------------------- 144
           P G  GP G +G IG  G  G+ G  GE+G PGV                          
Sbjct: 545 PIGNMGPKGVRGFIGIPGIFGLPGADGERGLPGVPGKKGKMGRPGFPGDFGERGPPGPDG 604

Query: 145 ----VGPPGPQGIPGDEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGY------PG 191
               +G PGP GIPG  G  GP G +G PG   P+G+PG+ G+ G KGD G       PG
Sbjct: 605 NPGEIGAPGPVGIPGFIGDMGPVGMVGPPGLIGPKGVPGNPGEPGLKGDKGELGLPGEPG 664

Query: 192 RIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTG 245
             G  G  G+   PG PG+ G PG  G  G  G DGLP   G +G PG  G  G+ G+ G
Sbjct: 665 EPGFQGDKGIQGSPGLPGVQGKPGPQGKIGDRGPDGLPGPLGPEGFPGDIGPPGQNGVEG 724

Query: 246 PRGNRG 251
           P+GN G
Sbjct: 725 PKGNAG 730



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 89/182 (48%), Gaps = 17/182 (9%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QG +G +GE G KG +G KG  G  G PG++G  GP+G PG  G+RG  G+ G  G Q
Sbjct: 1003 GEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKPGKIGERGKPGEKGSKGHQ 1062

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  G+ G  G +GD G+ G  G  G  G  G PG  G  G  G+ G  G  G  G  G P
Sbjct: 1063 GQLGEMGALGEQGDTGFIGPKGSRGTTGFMGAPGKMGQQGEPGLVGYEGHQGPQGSLGSP 1122

Query: 233  GTNGTNGEKG----MTGP------------RGNRGKSGINGVPGTPAICAYK-RESCSLL 275
            G  G  GE+G    + GP            RG+RG+ G  G PG   +   + +E    +
Sbjct: 1123 GPKGEKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGV 1182

Query: 276  PN 277
            P 
Sbjct: 1183 PG 1184



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 79/149 (53%), Gaps = 3/149 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G IG++G  G  G  G  G+ G KG PG +G  G  G+PG  G +G  G  G PG 
Sbjct: 1225 PGPRGVIGREGFEGEPGLDGAAGKDGAKGMPGDLGRDGDVGLPGKPGPQGNAGAPGLPGV 1284

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGK 228
            QG  G +G+RG  G  G PG+ GL+G  G P   G+ G  G PG  G  G PG  G+ G 
Sbjct: 1285 QGSFGPKGERGITGHSGPPGKRGLNGGMGFPGKQGDQGFKGQPGDAGEQGFPGVLGIFGP 1344

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G PG  G  G +G  GP+G  G  G  G
Sbjct: 1345 QGPPGDFGPVGIQGPKGPQGLMGMQGAIG 1373



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 84/162 (51%), Gaps = 19/162 (11%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPKGD----MG 167
            IG KG  G  G MG  G+ G++G PG+VG      P G  G PG +G++G +GD     G
Sbjct: 1080 IGPKGSRGTTGFMGAPGKMGQQGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDGKVEG 1139

Query: 168  YPGPQG---IPGDEGKRGPKGDMGYPGRIGLDG---RDGLPGEPGLDGIPGRNGMDGIPG 221
             PGP G     G+ G RG  GD GYPG  G+ G   ++G PG PG  G  G  G  G  G
Sbjct: 1140 PPGPSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKG 1199

Query: 222  KDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  GK+   G  G  G+ G  G+ GPRG  G+ G  G PG
Sbjct: 1200 NKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGEPG 1241



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 81/166 (48%), Gaps = 18/166 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGD------EGKRGPK 163
            GL G  G+KG +G+ G +G +G  G +G PGV    GP GP G  G+      EG+ G K
Sbjct: 958  GLPGEPGEKGAVGSPGNIGEQGLIGPRGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEK 1017

Query: 164  GDMGY---------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G +G+         PG  G+ G EGK G  G+ G PG  G  G  G  GE G  G  G  
Sbjct: 1018 GVIGFKGTEGRTGDPGLIGVKGPEGKPGKIGERGKPGEKGSKGHQGQLGEMGALGEQGDT 1077

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G  G  G PG  G  GE G+ G  G++G  G  G PG
Sbjct: 1078 GFIGPKGSRGTTGFMGAPGKMGQQGEPGLVGYEGHQGPQGSLGSPG 1123



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/117 (44%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
            PG+QG  G KGE G  G  G  G+RG  G  G  G  G QG    PGD G++G  G +G 
Sbjct: 1282 PGVQGSFGPKGERGITGHSGPPGKRGLNGGMGFPGKQGDQGFKGQPGDAGEQGFPGVLGI 1341

Query: 169  PGPQGIPGD------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             GPQG PGD      +G +GP+G MG  G IG  G  G  G PG  G  G  G  G+
Sbjct: 1342 FGPQGPPGDFGPVGIQGPKGPQGLMGMQGAIGPVGIIGPSGNPGPQGDKGNKGEMGV 1398



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 42/83 (50%), Gaps = 8/83 (9%)

Query: 190 PGRI--GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEK 241
           PGR   G+ G  GL G PG  G PGR G  G PG  G PG  GI      PG  G  G +
Sbjct: 481 PGRAPSGIKGDPGLVGLPGQPGQPGRKGQKGHPGPSGHPGDQGIRGPDGSPGAKGYPGRQ 540

Query: 242 GMTGPRGNRGKSGINGVPGTPAI 264
           G+ GP GN G  G+ G  G P I
Sbjct: 541 GLPGPIGNMGPKGVRGFIGIPGI 563


>gi|20380052|gb|AAH28178.1| COL3A1 protein [Homo sapiens]
          Length = 1163

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/131 (50%), Positives = 75/131 (57%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGEMG  G  G  G  G  GPPGP G  G  G RG  G+ G  G +G PG  G+RG  G 
Sbjct: 395 KGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGI 454

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +GIPG  G  GE+G  GP
Sbjct: 455 PGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGP 514

Query: 247 RGNRGKSGING 257
            G RG +G  G
Sbjct: 515 AGPRGAAGEPG 525



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/154 (47%), Positives = 79/154 (51%), Gaps = 18/154 (11%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPKGDMGYPGPQGIP 175
           GAKGE+G  G  G  GAPG  G PGPQG          PG  G  G KG+MG  G  G P
Sbjct: 348 GAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPG------EPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G RGP G  G  G  GL G  G PG      EPG  G  G  G+ G+PG  G  GKD
Sbjct: 408 GLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKD 467

Query: 230 GIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
           G PG  G NG  G  G RG    RG +G NG+PG
Sbjct: 468 GSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPG 501



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 88/214 (41%), Gaps = 63/214 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306

Query: 171 PQ---GIPGDEGKR---------------------------GPKGDMGYPGRIGLDGRDG 200
            +   G+PG  G R                           G KG++G  G  G +G  G
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG 366

Query: 201 LPGEP------------------------------GLDGIPGRNGMDGIP---GKDGLPG 227
             GEP                              G+ G PG  G  G P   G +G PG
Sbjct: 367 QRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPG 426

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G NG KG  GPRG RG++GI GVPG 
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGA 460



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 62/111 (55%), Gaps = 18/111 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGK 159
           PGL+G  G+ G+ GAKGE G +GERGE G PGV G             PG  G+PG  G+
Sbjct: 425 PGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGE 484

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           RG  G  G  GP GIPG+   +GP G+ G PG  G  G  G   EPG DG+
Sbjct: 485 RGAPGFRGPAGPNGIPGE---KGPAGERGAPGPAGPRGAAG---EPGRDGV 529



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 81/186 (43%), Gaps = 39/186 (20%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  G+ G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG+NG  G++G  GP+G+                  +G+ G  G+PG P
Sbjct: 348 GAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407

Query: 263 AICAYK 268
            +   +
Sbjct: 408 GLMGAR 413



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297


>gi|293345739|ref|XP_002726101.1| PREDICTED: collagen alpha-1(XXIV) chain-like [Rattus norvegicus]
          Length = 1752

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 92/159 (57%), Gaps = 9/159 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQG  G  G++G  GE G +G  G+ G PG +G  GP G  GD G +G  G  G  GP
Sbjct: 1012 PGLQGLPGSSGDMGPAGEPGPRGLPGDAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDVGP 1071

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGL 225
             G  G  G+ GP+G+ G PG  GL G+DGL G PG  G+PG +      G+ G  G  G 
Sbjct: 1072 TGSEGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGEKGEMGLPGTAGPVGR 1131

Query: 226  PGKDGIPGTN---GTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG+ G PG+    GT GE+G TG +G++G++G  G  G+
Sbjct: 1132 PGQMGPPGSEGIVGTPGERGRTGKKGDKGQTGPVGEAGS 1170



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 95/179 (53%), Gaps = 24/179 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGYP 169
            G QG  G KGE G +G+ G+ G  G+ G+PG   V G PG QG+PG  G  GP G+   P
Sbjct: 974  GDQGGHGAKGEKGNQGKRGLPGRAGKTGSPGERGVQGKPGLQGLPGSSGDMGPAGE---P 1030

Query: 170  GPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            GP+G+PGD               EG  G +G+ G  G +G  G +G  GEPG  G PG  
Sbjct: 1031 GPRGLPGDAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDVGPTGSEGATGEPGPRGEPGAP 1090

Query: 215  GMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G +G+ GKDGL   PG  G+PG +G  GE G+ G  G  G+ G  G PG+  I     E
Sbjct: 1091 GEEGLQGKDGLKGAPGGSGLPGEDGEKGEMGLPGTAGPVGRPGQMGPPGSEGIVGTPGE 1149



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 93/179 (51%), Gaps = 33/179 (18%)

Query: 116  GPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGI------------------P 154
            G IG+ G +G  GE+G+ G   E+GE+G+PG +GP G +G+                  P
Sbjct: 887  GKIGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPIGLP 946

Query: 155  GDEGKRG------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  G RG      PKG  G  GP G+ GD+G  G KG+ G  G+ GL GR G  G PG  
Sbjct: 947  GLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGRAGKTGSPGER 1006

Query: 209  GIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+ G+ G+ G+PG        G PG  G+PG  G  GE G+ GP G  G SG+ G PG 
Sbjct: 1007 GVQGKPGLQGLPGSSGDMGPAGEPGPRGLPGDAGLPGEMGVEGPPGTEGDSGLQGEPGA 1065



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 100/201 (49%), Gaps = 18/201 (8%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPG 149
            L   QG   +  E    G +G  G+ G+ G+ GE GV+G+ G +G PG        G PG
Sbjct: 972  LAGDQGGHGAKGEKGNQGKRGLPGRAGKTGSPGERGVQGKPGLQGLPGSSGDMGPAGEPG 1031

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPG 206
            P+G+PGD G  G  G  G PG +G  G +G+ G KGD+G  G  G  G     G PG PG
Sbjct: 1032 PRGLPGDAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDVGPTGSEGATGEPGPRGEPGAPG 1091

Query: 207  LDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             +G+ G++G+ G PG  GLPG+D      G+PGT G  G  G  GP G+    GI G PG
Sbjct: 1092 EEGLQGKDGLKGAPGGSGLPGEDGEKGEMGLPGTAGPVGRPGQMGPPGSE---GIVGTPG 1148

Query: 261  TPAICAYKRESCSLLPNSETS 281
                   K +     P  E  
Sbjct: 1149 ERGRTGKKGDKGQTGPVGEAG 1169



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 92/168 (54%), Gaps = 15/168 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYP 169
            G++GP G +G+ G +GE G KG+ G  G+ G  G PGP+   G PG+EG +G  G  G P
Sbjct: 1046 GVEGPPGTEGDSGLQGEPGAKGDVGPTGSEGATGEPGPRGEPGAPGEEGLQGKDGLKGAP 1105

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---PGRNGMDGIPGKDGLP 226
            G  G+PG++G+   KG+MG PG  G  GR G  G PG +GI   PG  G  G  G  G  
Sbjct: 1106 GGSGLPGEDGE---KGEMGLPGTAGPVGRPGQMGPPGSEGIVGTPGERGRTGKKGDKGQT 1162

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGTPAICAYK 268
            G  G  G+ G+ G  G +GP+G RG        G+ G  G P I  Y+
Sbjct: 1163 GPVGEAGSRGSPGRVGDSGPKGARGTRGAVGPLGLMGPEGEPGIPGYR 1210



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 92/186 (49%), Gaps = 39/186 (20%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGD 165
            PGL+G  GQ+G   E G +GE G+KGERG +G  G  G PGP    GIPG  G  GPKG 
Sbjct: 1271 PGLRGAAGQQGPPGEPGDQGEQGLKGERGSEGPQGKKGVPGPSGKPGIPGLPGLPGPKGL 1330

Query: 166  MGYPGPQGI------PGDEGKRGPKGDMGYPGRIGLDG---------------------- 197
             GY G  G+      PG  GK+G  G  G PGR GL G                      
Sbjct: 1331 QGYHGVDGLSGYPGKPGLLGKQGLPGTTGSPGRTGLAGSPGPQGGKGSSGPPGSPGVPGP 1390

Query: 198  --RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGK 252
                GLPG+PG+ G  G+ G  G  G+ G PG  G PG +G  G    +G  GPRG  G 
Sbjct: 1391 KGEQGLPGQPGIPGQRGQRGTQGDQGRRGEPGLKGQPGEHGNQGLTGFQGFPGPRGPEGD 1450

Query: 253  SGINGV 258
            +GI G+
Sbjct: 1451 AGIIGI 1456



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 85/170 (50%), Gaps = 42/170 (24%)

Query: 127  KGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ---GIPGDEGK 180
            KG MGV G RG   ++G PG  G  G QG+ G+ G  GP+G  G PGP    GIPG  G 
Sbjct: 1265 KGHMGVPGLRGAAGQQGPPGEPGDQGEQGLKGERGSEGPQGKKGVPGPSGKPGIPGLPGL 1324

Query: 181  RGPKGDM---------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---------- 221
             GPKG           GYPG+ GL G+ GL   PG  G PGR G+ G PG          
Sbjct: 1325 PGPKGLQGYHGVDGLSGYPGKPGLLGKQGL---PGTTGSPGRTGLAGSPGPQGGKGSSGP 1381

Query: 222  -----------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                       + GLPG+ GIP   G  G++G  G +G RG+ G+ G PG
Sbjct: 1382 PGSPGVPGPKGEQGLPGQPGIP---GQRGQRGTQGDQGRRGEPGLKGQPG 1428



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 92/181 (50%), Gaps = 3/181 (1%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
             +QG   +  +  P G +G  G+   +GE GA GE G++G+ G KGAPG  G PG  G  
Sbjct: 1058 GLQGEPGAKGDVGPTGSEGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGEK 1117

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G+ G  G  G +G PG  G PG EG  G  G+ G  G+ G  G+ G  GE G  G PGR 
Sbjct: 1118 GEMGLPGTAGPVGRPGQMGPPGSEGIVGTPGERGRTGKKGDKGQTGPVGEAGSRGSPGRV 1177

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            G  G  G  G  G  G  G  G  GE G+ G RG  G+ G +G+PG      Y  E  ++
Sbjct: 1178 GDSGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGLEGQPGPSGLPGPKGEKGYPGEDSTV 1237

Query: 275  L 275
            L
Sbjct: 1238 L 1238



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 92/184 (50%), Gaps = 36/184 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERG------------------------EKGAPGVVGPP 148
            G+ G IG+KGE G+ G +G +GE+G                         +GAPG  GP 
Sbjct: 902  GITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPIGLPGLVGARGAPGSPGPK 961

Query: 149  G------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G      P G+ GD+G  G KG+ G  G +G+PG  GK G  G+ G  G+ GL    GLP
Sbjct: 962  GQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGRAGKTGSPGERGVQGKPGL---QGLP 1018

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            G  G  G  G  G  G+PG  GLPG+ G+   PGT G +G +G  G +G+ G +G  G  
Sbjct: 1019 GSSGDMGPAGEPGPRGLPGDAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDVGPTGSEGAT 1078

Query: 260  GTPA 263
            G P 
Sbjct: 1079 GEPG 1082



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 80/149 (53%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G        GE+G+ G  G+VGPPG QG      ++G KG  G PG 
Sbjct: 565 PGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQG------EKGLKGHTGLPGL 618

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G  G  G  G  G  GYPGR GL G +G PG  G+ G  G  G  G  G +G  G  G+
Sbjct: 619 RGEQGIPGLAGNVGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEAGQLGPEGERGTPGV 678

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G +G  G  G+RG +G++G PG
Sbjct: 679 RGKKGPKGRQGFPGDFGDRGPAGLDGSPG 707



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 84/189 (44%), Gaps = 40/189 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP+G+ G++G  G  G+ G  GE+G  G  G  G  G  G+ G RG  G +G  GP
Sbjct: 1123 PGTAGPVGRPGQMGPPGSEGIVGTPGERGRTGKKGDKGQTGPVGEAGSRGSPGRVGDSGP 1182

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
            +G  G  G  GP G MG  G  G+ G  GL G+PG  G+PG  G  G PG+D        
Sbjct: 1183 KGARGTRGAVGPLGLMGPEGEPGIPGYRGLEGQPGPSGLPGPKGEKGYPGEDSTVLGPPG 1242

Query: 224  --------------------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                                            G  G+ G PG  G  GE+G+ G RG+ G
Sbjct: 1243 PRGEPGPMGERGERGEHGEEGYKGHMGVPGLRGAAGQQGPPGEPGDQGEQGLKGERGSEG 1302

Query: 252  KSGINGVPG 260
              G  GVPG
Sbjct: 1303 PQGKKGVPG 1311



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 90/191 (47%), Gaps = 58/191 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRG-P------ 162
            G  GP G +G  GA G +G+ G  GE G PG   + G PGP G+PG +G++G P      
Sbjct: 1178 GDSGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGLEGQPGPSGLPGPKGEKGYPGEDSTV 1237

Query: 163  ---------------------------KGDMGYPG---------PQGIPGDEGKRG---- 182
                                       KG MG PG         P G PGD+G++G    
Sbjct: 1238 LGPPGPRGEPGPMGERGERGEHGEEGYKGHMGVPGLRGAAGQQGPPGEPGDQGEQGLKGE 1297

Query: 183  -----PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGT 234
                 P+G  G PG  G  G  GLPG PG  G+ G +G+DG+   PGK GL GK G+PGT
Sbjct: 1298 RGSEGPQGKKGVPGPSGKPGIPGLPGLPGPKGLQGYHGVDGLSGYPGKPGLLGKQGLPGT 1357

Query: 235  NGTNGEKGMTG 245
             G+ G  G+ G
Sbjct: 1358 TGSPGRTGLAG 1368



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 72/134 (53%), Gaps = 6/134 (4%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           +G  G+ G  G  G PG+ GP GP+G PG    +   G KGD G  G  G PG +G++G 
Sbjct: 550 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGEKGL 609

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           KG  G P   GL G  G+PG  G  G PG  G  G+ G +G PG  G+ G  G+ GE G 
Sbjct: 610 KGHTGLP---GLRGEQGIPGLAGNVGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEAGQ 666

Query: 244 TGPRGNRGKSGING 257
            GP G RG  G+ G
Sbjct: 667 LGPEGERGTPGVRG 680



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 87/193 (45%), Gaps = 51/193 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPG---------PQGIPGDEGKR 160
           GL GP G +GE G KG  G+ G RGE+G PG+   VG PG         P+G PG +G R
Sbjct: 596 GLVGPPGLQGEKGLKGHTGLPGLRGEQGIPGLAGNVGSPGYPGRQGLAGPEGNPGSKGVR 655

Query: 161 G------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG-------- 206
           G        G +G  G +G PG  GK+GPKG  G+PG  G  G  GL G PG        
Sbjct: 656 GFIGSPGEAGQLGPEGERGTPGVRGKKGPKGRQGFPGDFGDRGPAGLDGSPGLVGGIGPP 715

Query: 207 -------------------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                                    L G  G  G+ G  G+ G+ G+ G PG  G  G  
Sbjct: 716 GFPGIRGNVGPAGPVGPPGVPGPMGLSGSRGPPGIKGDKGEQGVAGEPGEPGYPGDKGAI 775

Query: 242 GMTGPRGNRGKSG 254
           G  GP G RGKSG
Sbjct: 776 GSPGPPGIRGKSG 788



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 92/200 (46%), Gaps = 30/200 (15%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            L+G  G++G IG  GE+G +G+ G K   G +G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 840  LKGTQGEEGPIGPFGELGSRGKPGRK---GYMGEPGPEGLKGETGDQGDIGKIGETGPVG 896

Query: 174  IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
            +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 897  LPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPIGLPGLVGARGAPG 956

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP------GTPAICA 266
              G  G  G  G  G  G  G +G  GEKG  G RG  G++G  G P      G P +  
Sbjct: 957  SPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGRAGKTGSPGERGVQGKPGLQG 1016

Query: 267  YKRESCSLLPNSETSQLLIP 286
                S  + P  E     +P
Sbjct: 1017 LPGSSGDMGPAGEPGPRGLP 1036



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 89/181 (49%), Gaps = 36/181 (19%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQ---------------- 151
           PPG++G  G++G  G  GE G  G++G  G+PG   + G  GP                 
Sbjct: 747 PPGIKGDKGEQGVAGEPGEPGYPGDKGAIGSPGPPGIRGKSGPSGQPGDPGPQGPTGPPG 806

Query: 152 --------GIPGDEGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                   GIPG  G  GPKG +G    PGP G+ G +G+ GP G  G  G  G  GR G
Sbjct: 807 PEGFPGDIGIPGQNGPEGPKGHLGSRGPPGPPGLKGTQGEEGPIGPFGELGSRGKPGRKG 866

Query: 201 LPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             GEPG +G+ G  G  G  GK       GLPG+ GI G+ G  GE+G  GP G +G+ G
Sbjct: 867 YMGEPGPEGLKGETGDQGDIGKIGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGEKG 926

Query: 255 I 255
           +
Sbjct: 927 V 927



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 67/133 (50%), Gaps = 21/133 (15%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------------PGRIGLDGRDGLPGEPG 206
           KRGP+G  G  G  G+PG  G +GPKGD G             PG +GL G  GL GE G
Sbjct: 549 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGEKG 608

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           L    G  G+ G+ G+ G+PG  G  G+ G  G +G+ GP GN G  G+ G  G+P    
Sbjct: 609 LK---GHTGLPGLRGEQGIPGLAGNVGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPG--- 662

Query: 267 YKRESCSLLPNSE 279
              E+  L P  E
Sbjct: 663 ---EAGQLGPEGE 672



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 97/250 (38%), Gaps = 75/250 (30%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGI 153
           V   G+        P G  G  G +G IG+ GE G  G  GE+G PGV G  GP   QG 
Sbjct: 631 VGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEAGQLGPEGERGTPGVRGKKGPKGRQGF 690

Query: 154 PGDEGKRGPKGDMGYPG---------------------------------------PQGI 174
           PGD G RGP G  G PG                                       P GI
Sbjct: 691 PGDFGDRGPAGLDGSPGLVGGIGPPGFPGIRGNVGPAGPVGPPGVPGPMGLSGSRGPPGI 750

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG------------------------- 209
            GD+G++G  G+ G PG  G  G  G PG PG+ G                         
Sbjct: 751 KGDKGEQGVAGEPGEPGYPGDKGAIGSPGPPGIRGKSGPSGQPGDPGPQGPTGPPGPEGF 810

Query: 210 -----IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGT 261
                IPG+NG +G  G  G  G  G PG  GT GE+G  GP    G+RGK G  G  G 
Sbjct: 811 PGDIGIPGQNGPEGPKGHLGSRGPPGPPGLKGTQGEEGPIGPFGELGSRGKPGRKGYMGE 870

Query: 262 PAICAYKRES 271
           P     K E+
Sbjct: 871 PGPEGLKGET 880



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 75/161 (46%), Gaps = 30/161 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKR-------- 160
            PGL GP G +G  G  G  G  G+    G++G PG  G PG  G+ G  G +        
Sbjct: 1322 PGLPGPKGLQGYHGVDGLSGYPGKPGLLGKQGLPGTTGSPGRTGLAGSPGPQGGKGSSGP 1381

Query: 161  -------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                   GPKG+ G PG  GIPG  G+RG +GD G              GEPGL G PG 
Sbjct: 1382 PGSPGVPGPKGEQGLPGQPGIPGQRGQRGTQGDQGR------------RGEPGLKGQPGE 1429

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            +G  G+ G  G PG  G  G  G  G  G  GP G RG +G
Sbjct: 1430 HGNQGLTGFQGFPGPRGPEGDAGIIGIVGPKGPVGQRGNTG 1470



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 89/222 (40%), Gaps = 63/222 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPGVVGP 147
           PG  G  G KG IG+ G  G++G+ G                          G PG  GP
Sbjct: 763 PGEPGYPGDKGAIGSPGPPGIRGKSGPSGQPGDPGPQGPTGPPGPEGFPGDIGIPGQNGP 822

Query: 148 PGPQG---------------IPGDEGKRGPKGDMGY---PGPQGI---PGDEGKRGPKGD 186
            GP+G                 G+EG  GP G++G    PG +G    PG EG +G  GD
Sbjct: 823 EGPKGHLGSRGPPGPPGLKGTQGEEGPIGPFGELGSRGKPGRKGYMGEPGPEGLKGETGD 882

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI--------------- 231
            G  G+IG  G  GLPGE G+ G  G  G  G PG  G  G+ G+               
Sbjct: 883 QGDIGKIGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGP 942

Query: 232 ---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
              PG  G  G  G  GP+G RG  G +G+ G       K E
Sbjct: 943 IGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGE 984



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 6/83 (7%)

Query: 123  EIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE- 178
            E G  G+ G+ G+RG++G     G  G PG +G PG+ G +G  G  G+PGP+G  GD  
Sbjct: 1393 EQGLPGQPGIPGQRGQRGTQGDQGRRGEPGLKGQPGEHGNQGLTGFQGFPGPRGPEGDAG 1452

Query: 179  --GKRGPKGDMGYPGRIGLDGRD 199
              G  GPKG +G  G  G  GR+
Sbjct: 1453 IIGIVGPKGPVGQRGNTGPLGRE 1475



 Score = 42.7 bits (99), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 63/141 (44%), Gaps = 30/141 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------------------- 151
            G+ G  G  G+ G  G+ G+ G  G  G  G+ G PGPQ                     
Sbjct: 1335 GVDGLSGYPGKPGLLGKQGLPGTTGSPGRTGLAGSPGPQGGKGSSGPPGSPGVPGPKGEQ 1394

Query: 152  ------GIPGDEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                  GIPG  G+RG +GD G    PG +G PG+ G +G  G  G+PG  G +G  G+ 
Sbjct: 1395 GLPGQPGIPGQRGQRGTQGDQGRRGEPGLKGQPGEHGNQGLTGFQGFPGPRGPEGDAGII 1454

Query: 203  GEPGLDGIPGRNGMDGIPGKD 223
            G  G  G  G+ G  G  G++
Sbjct: 1455 GIVGPKGPVGQRGNTGPLGRE 1475


>gi|403268668|ref|XP_003926391.1| PREDICTED: collagen alpha-1(IX) chain isoform 1 [Saimiri
           boliviensis boliviensis]
          Length = 921

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/189 (45%), Positives = 104/189 (55%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 484

Query: 141 APGVVGPPGPQGIPG---DEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQGIPG   D+G+R      GPKGD G  G +GIPG     GPKGD G   
Sbjct: 485 ARGLDGEPGPQGIPGAPGDQGQRGPPGEAGPKGDRGAQGVRGIPGLP---GPKGDTGL-- 539

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G+DG DG+PG PG  G PG+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G
Sbjct: 540 -AGVDGHDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 599 QMGNSGKPG 607



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/184 (44%), Positives = 99/184 (53%), Gaps = 21/184 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 426 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 485

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQGIPG   D+G+RGP G+ G  G  G  G  G+PG PG  G  G  G+DG 
Sbjct: 486 RGLDGEPGPQGIPGAPGDQGQRGPPGEAGPKGDRGAQGVRGIPGLPGPKGDTGLAGVDG- 544

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
                    DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  S     +
Sbjct: 545 --------HDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGK 596

Query: 280 TSQL 283
             Q+
Sbjct: 597 PGQM 600



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 81/159 (50%), Gaps = 12/159 (7%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G+ G  G +G+ G  GE G KG+RG +G          +GIPG  G +G  G  G
Sbjct: 491 EPGPQGIPGAPGDQGQRGPPGEAGPKGDRGAQGV---------RGIPGLPGPKGDTGLAG 541

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G  G
Sbjct: 542 VDGHDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMG 601

Query: 228 KDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 602 NSGKPGQQGPPGEAGPRGPRGLPGSRGEMGPVGSPGLPG 640



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 63/115 (54%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 477

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  GIPG  G  G++   G  GP+G+RG  G+ G+PG P 
Sbjct: 478 GDKGEKGARGLDGEPGPQGIPGAPGDQGQRGPPGEAGPKGDRGAQGVRGIPGLPG 532



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 75/149 (50%), Gaps = 24/149 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G RG KGA G +G PG QG  G+EG +G  G++G    QG PG +G RG  
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGA---QGPPGAQGLRGIT 474

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK--- 241
           G +G  G  G  G DG PG              GIPG  G  G+ G PG  G  G++   
Sbjct: 475 GIVGDKGEKGARGLDGEPGP------------QGIPGAPGDQGQRGPPGEAGPKGDRGAQ 522

Query: 242 ------GMTGPRGNRGKSGINGVPGTPAI 264
                 G+ GP+G+ G +G++G  G P +
Sbjct: 523 GVRGIPGLPGPKGDTGLAGVDGHDGIPGM 551



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 87/193 (45%), Gaps = 48/193 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G+ G  GP+
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEAGPRGPR 621

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
           G+PG  G+ GP G  G PG+                   G+ G  G+ GEPG  G  G +
Sbjct: 622 GLPGSRGEMGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGIVGEPGPKGEQGAS 681

Query: 215 GMD------------GIPGKDGLPGKDGIPGTNGTNGEKGM------------TGPRGNR 250
           G +            G+PG  G  G  G PG  G  G +G+             G +G +
Sbjct: 682 GEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQ 741

Query: 251 GKSGINGVPGTPA 263
           G +G+ GV G P 
Sbjct: 742 GATGLPGVQGPPG 754



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 75/179 (41%), Gaps = 60/179 (33%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   +MG  G+ G++G PG  GP GP+G+PG  G+ GP G  G 
Sbjct: 579 PGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEAGPRGPRGLPGSRGEMGPVGSPGL 638

Query: 169 PGP------------------------QGIPGDEGKRGPKG---------------DMGY 189
           PG                         +GI G+ G +G +G               D+G 
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGIVGEPGPKGEQGASGEEGEAGERGELGDIGL 698

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
           P   G  G  G PGEPGL G  G  G+                G  G  GLPG  G PG
Sbjct: 699 P---GPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 84/197 (42%), Gaps = 60/197 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGPQGIPGD 156
           PGL GP G  G  G  G  G+ G               + G +G PGV G PG +G+ G+
Sbjct: 528 PGLPGPKGDTGLAGVDGHDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGE 587

Query: 157 E------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP----- 205
           +      GK G  G+ G PG QG PG+ G RGP+G  G  G +G  G  GLPG+      
Sbjct: 588 KGSTGAPGKPGQMGNSGKPGQQGPPGEAGPRGPRGLPGSRGEMGPVGSPGLPGKLGSLGS 647

Query: 206 -------------------GLDGIPGRNGMDGIPGKD------------GLPGKDGIPGT 234
                              G+ G PG  G  G  G++            GLPG     G+
Sbjct: 648 PGLPGLPGPPGLPGMKGDRGIVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPK---GS 704

Query: 235 NGTNGEKGMTGPRGNRG 251
            G  GE G+ GP G+RG
Sbjct: 705 AGNPGEPGLRGPEGSRG 721


>gi|326668779|ref|XP_002662551.2| PREDICTED: collagen alpha-1(VII) chain-like [Danio rerio]
          Length = 2698

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/147 (46%), Positives = 85/147 (57%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            + GP G+KG  G  GE G KG +GEKGA G  GPPG QG+ G++G+RG  G  G  GP G
Sbjct: 2276 VGGPPGEKGVKGETGERGPKGGQGEKGAKGQEGPPGEQGLRGEQGERGSTGFQGARGPGG 2335

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
              G  GK G  G  G  G +GL G  GL GE G  G+ G +G  G  G  G+ G+ G+PG
Sbjct: 2336 QKGTPGKDGLPGMRGEKGEVGLIGLRGLKGERGSKGVCGPSGQKGDKGDSGINGRPGLPG 2395

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  GE G+ GP G+ GK G+ G  G
Sbjct: 2396 RKGEQGEVGLQGPIGSPGKEGLIGAKG 2422



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 84/155 (54%), Gaps = 19/155 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PG +G  G  G  GAKG+ G   ++GE+GAPG  G PG  G  GD+G RGP         
Sbjct: 1340 PGEKGERGFPGPAGAKGDKGDAAQKGERGAPGA-GEPGQPGPKGDQGDRGPGGLSGKPGA 1398

Query: 163  ---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
               +GD G  G  G PG +G  GP+G  G  G     G DG+ GEPGL G PG  G+ G+
Sbjct: 1399 KGSQGDAGERGEAGSPGSQGPMGPRGKDGLKGD---KGEDGIAGEPGLPGKPGERGLRGL 1455

Query: 220  PGKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRG 251
            PG+ G PG     G PG +G NG  G  GPRG +G
Sbjct: 1456 PGQSGQPGTKGDTGDPGEDGRNGTPGTMGPRGPKG 1490



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 97/209 (46%), Gaps = 54/209 (25%)

Query: 110  CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK----RGPKGD 165
            CP G +G  G+KGE G  G  G KGE G  G PG  GP GP+G PG  G     +G KG+
Sbjct: 1023 CPKGAKGERGEKGERGRDGVDGRKGEPGRDGLPGREGPRGPEGTPGQPGSSLGVKGEKGE 1082

Query: 166  MGYP------------GPQGIPGDEGKRGPKGDMGYPGRI-------------------- 193
             G+P            G  G+PG +G  G +GD G PG I                    
Sbjct: 1083 RGFPGLDGSSGIPGRSGAVGLPGSQGLPGIRGDPGEPGLIGPQGSKGEKGEREMMDCYYL 1142

Query: 194  -----------GLDGRDGLPGEPGLDGIPGR---NGMDGIPGKDGLPGKDGIPGTNGTNG 239
                       GL GR G PG PG+ G PGR   NG  G PG  GLPG+DG PG+ GT G
Sbjct: 1143 LQGEAGSAIGGGLPGRKGEPGIPGIPGTPGRQGVNGAKGEPGARGLPGQDGRPGSQGTPG 1202

Query: 240  EKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                   +G++G  G  G+PG  +  A K
Sbjct: 1203 LS----IKGDKGSPGERGLPGVGSGVAAK 1227



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 86/175 (49%), Gaps = 7/175 (4%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE--MGVKGERGEKGAPGVVGPPGPQGIP 154
            VA +G         P G QGP G  G+ GAKGE    V+G+ G KG  G  G  GP+G P
Sbjct: 1224 VAAKGDPGEPGSSGPQGPQGPRGVTGQKGAKGEPAESVEGQPGPKGNTGDPGDRGPRGPP 1283

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G+ G +G +G  G PG  G  GD G  GP GD G  G  G  G  GL G PG +G+PG  
Sbjct: 1284 GESGTKGDRGQAGAPGSDGAKGDRGPSGPAGDKGDKGSAGPSGPQGLRGLPGSNGLPGEK 1343

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTN-----GEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G PG  G  G  G     G       GE G  GP+G++G  G  G+ G P  
Sbjct: 1344 GERGFPGPAGAKGDKGDAAQKGERGAPGAGEPGQPGPKGDQGDRGPGGLSGKPGA 1398



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 94/211 (44%), Gaps = 65/211 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRGPKGDM 166
            PG+ G  G+ GE G  GE G KGERG+KG  G       G PGP+G+PG  G RG  G +
Sbjct: 1893 PGVPGRAGELGEAGRPGEKGDKGERGDKGPAGDSASVQSGLPGPRGLPGPAGVRGEPGAV 1952

Query: 167  GYPGPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIP--------- 211
            G   PQG PG+ G    RG KGD G  G  G DG  G  GE   PG DG P         
Sbjct: 1953 G---PQGSPGERGYTGARGEKGDKGASGERGKDGSPGSQGESGKPGQDGKPISAKGPMGG 2009

Query: 212  ------------------------------------------GRNGMDGIPGKDGLPGKD 229
                                                      G  G  G+PG+DG PGKD
Sbjct: 2010 NGPPGPPGVKGDHGEPGIGVQGPPGPQGNRGLPGPAGTPGAIGEGGKPGVPGRDGAPGKD 2069

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG NG  G  G  GP+G +G+ G +G PG
Sbjct: 2070 GLPGLNGKQGIAGPVGPQGLKGEQGDSGPPG 2100



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 90/158 (56%), Gaps = 3/158 (1%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIPGD 156
            +G    T E  P G QG  G KG+ G  GE G++GE+GE+G+    G  GP G +G PG 
Sbjct: 2283 KGVKGETGERGPKGGQGEKGAKGQEGPPGEQGLRGEQGERGSTGFQGARGPGGQKGTPGK 2342

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G  G +G+ G  G  G+ G +G+RG KG  G  G+ G  G  G+ G PGL G  G  G 
Sbjct: 2343 DGLPGMRGEKGEVGLIGLRGLKGERGSKGVCGPSGQKGDKGDSGINGRPGLPGRKGEQGE 2402

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G+ G  G PGK+G+ G  G  G  G+TGP+G +G+ G
Sbjct: 2403 VGLQGPIGSPGKEGLIGAKGDRGFDGVTGPKGAQGEKG 2440



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 84/164 (51%), Gaps = 26/164 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G  G  GA G  G+KG++GE     V GPPG +G+ G+ G+RGPKG       
Sbjct: 2246 PGTPGDAGPPGPTGAAGLPGLKGDKGETQL--VGGPPGEKGVKGETGERGPKGG------ 2297

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG- 230
                  +G++G KG  G PG  GL G  G  G  G  G  G  G  G PGKDGLPG  G 
Sbjct: 2298 ------QGEKGAKGQEGPPGEQGLRGEQGERGSTGFQGARGPGGQKGTPGKDGLPGMRGE 2351

Query: 231  --------IPGTNGTNGEKGMTGP---RGNRGKSGINGVPGTPA 263
                    + G  G  G KG+ GP   +G++G SGING PG P 
Sbjct: 2352 KGEVGLIGLRGLKGERGSKGVCGPSGQKGDKGDSGINGRPGLPG 2395



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 84/157 (53%), Gaps = 8/157 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG-------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            GL G  G KGE G KG  G +G       ERG +G PG  G PG  GIPG  G+ G  G+
Sbjct: 1845 GLPGERGMKGEQGEKGPAGPQGPTGRAIGERGPEGPPGQAGEPGKPGIPGVPGRAGELGE 1904

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G PG +G  G+ G +GP GD     + GL G  GLPG  G+ G PG  G  G PG+ G 
Sbjct: 1905 AGRPGEKGDKGERGDKGPAGDSASV-QSGLPGPRGLPGPAGVRGEPGAVGPQGSPGERGY 1963

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
             G  G  G  G +GE+G  G  G++G+SG  G  G P
Sbjct: 1964 TGARGEKGDKGASGERGKDGSPGSQGESGKPGQDGKP 2000



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 80/169 (47%), Gaps = 18/169 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG----IPGDEGKRGPKGDMGY 168
            G +G +G +G  GA G  G+ GERG KG  G  GP GPQG      G+ G  GP G  G 
Sbjct: 1827 GEKGEVGPRGPSGADGARGLPGERGMKGEQGEKGPAGPQGPTGRAIGERGPEGPPGQAGE 1886

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDG--------------RDGLPGEPGLDGIPGRN 214
            PG  GIPG  G+ G  G+ G PG  G  G              + GLPG  GL G  G  
Sbjct: 1887 PGKPGIPGVPGRAGELGEAGRPGEKGDKGERGDKGPAGDSASVQSGLPGPRGLPGPAGVR 1946

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G  G PG+ G  G  G  G+KG +G RG  G  G  G  G P 
Sbjct: 1947 GEPGAVGPQGSPGERGYTGARGEKGDKGASGERGKDGSPGSQGESGKPG 1995



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 93/216 (43%), Gaps = 48/216 (22%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQK-GEIGAKGEMGVKGERGEKGAPGV---------V 145
            L   +G      E  P G QGP G+  GE G +G  G  GE G+ G PGV          
Sbjct: 1846 LPGERGMKGEQGEKGPAGPQGPTGRAIGERGPEGPPGQAGEPGKPGIPGVPGRAGELGEA 1905

Query: 146  GPPGPQGIPGDEGKRGPKGDM-----GYPGPQGIPGDEGKRG------PKG---DMGYPG 191
            G PG +G  G+ G +GP GD      G PGP+G+PG  G RG      P+G   + GY G
Sbjct: 1906 GRPGEKGDKGERGDKGPAGDSASVQSGLPGPRGLPGPAGVRGEPGAVGPQGSPGERGYTG 1965

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP-------------------GKDGIP 232
              G  G  G  GE G DG PG  G  G PG+DG P                   G  G P
Sbjct: 1966 ARGEKGDKGASGERGKDGSPGSQGESGKPGQDGKPISAKGPMGGNGPPGPPGVKGDHGEP 2025

Query: 233  GTN-----GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G       G  G +G+ GP G  G  G  G PG P 
Sbjct: 2026 GIGVQGPPGPQGNRGLPGPAGTPGAIGEGGKPGVPG 2061



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 78/166 (46%), Gaps = 20/166 (12%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            QG      E   PG QGP+G +G+ G KG+ G  G  GE G PG  G  G +G+PG  G+
Sbjct: 1402 QGDAGERGEAGSPGSQGPMGPRGKDGLKGDKGEDGIAGEPGLPGKPGERGLRGLPGQSGQ 1461

Query: 160  RGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYP-----------------GRIGLDGRD 199
             G KGD G PG     G PG  G RGPKGD G                   G  G  G  
Sbjct: 1462 PGTKGDTGDPGEDGRNGTPGTMGPRGPKGDQGIQGPPGPPGDVTTGEKQLRGEKGEKGEA 1521

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G PGE G  G+ G  G  G  G  G  G+ G+PG  G  G++G  G
Sbjct: 1522 GDPGEHGAKGLKGEAGAQGTAGSSGPEGQRGLPGARGDPGDRGSPG 1567



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 76/145 (52%), Gaps = 9/145 (6%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-------DMGYPGPQGIPGD 177
            G KGE G  G RG  GA G  G PG +G+ G++G++GP G        +G  GP+G PG 
Sbjct: 1824 GKKGEKGEVGPRGPSGADGARGLPGERGMKGEQGEKGPAGPQGPTGRAIGERGPEGPPGQ 1883

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG--KDGLPGKDGIPGTN 235
             G+ G  G  G PGR G  G  G PGE G  G  G  G  G     + GLPG  G+PG  
Sbjct: 1884 AGEPGKPGIPGVPGRAGELGEAGRPGEKGDKGERGDKGPAGDSASVQSGLPGPRGLPGPA 1943

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPG 260
            G  GE G  GP+G+ G+ G  G  G
Sbjct: 1944 GVRGEPGAVGPQGSPGERGYTGARG 1968



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 111/294 (37%), Gaps = 67/294 (22%)

Query: 45   GDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCN 104
            G   +   P  P V     +L E  R  EK  +    +      +A  +  L   +G   
Sbjct: 1882 GQAGEPGKPGIPGVPGRAGELGEAGRPGEKGDKGERGDKGPAGDSASVQSGLPGPRGLPG 1941

Query: 105  STKEYCPPGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK-- 159
                   PG  GP G  GE    GA+GE G KG  GE+G  G  G  G  G PG +GK  
Sbjct: 1942 PAGVRGEPGAVGPQGSPGERGYTGARGEKGDKGASGERGKDGSPGSQGESGKPGQDGKPI 2001

Query: 160  --------------RGPKGDMGYPG--PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                           G KGD G PG   QG PG +G RG  G  G PG IG  G+ G+PG
Sbjct: 2002 SAKGPMGGNGPPGPPGVKGDHGEPGIGVQGPPGPQGNRGLPGPAGTPGAIGEGGKPGVPG 2061

Query: 204  E---PGLDGIPGRNGMDGI----------------------------------------- 219
                PG DG+PG NG  GI                                         
Sbjct: 2062 RDGAPGKDGLPGLNGKQGIAGPVGPQGLKGEQGDSGPPGKSVTGPPGMKGEMGPPGQTLP 2121

Query: 220  --PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
              PG+ GLPG  G  G  G  G KG  G  G+ G  G NGV G P     K E+
Sbjct: 2122 GTPGESGLPGLQGPKGDKGPAGIKGERGAAGDPGDPGENGVRGPPGPKGVKGEA 2175



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 85/175 (48%), Gaps = 26/175 (14%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +GP G  G+ GAKG  G  GERGE G+PG  GP GP+G    +G +G KG+ G  G  
Sbjct: 1385 GDRGPGGLSGKPGAKGSQGDAGERGEAGSPGSQGPMGPRG---KDGLKGDKGEDGIAGEP 1441

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-------------- 218
            G+PG  G+RG +G  G  G+ G  G  G PGE G +G PG  G  G              
Sbjct: 1442 GLPGKPGERGLRGLPGQSGQPGTKGDTGDPGEDGRNGTPGTMGPRGPKGDQGIQGPPGPP 1501

Query: 219  ---------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                     + G+ G  G+ G PG +G  G KG  G +G  G SG  G  G P  
Sbjct: 1502 GDVTTGEKQLRGEKGEKGEAGDPGEHGAKGLKGEAGAQGTAGSSGPEGQRGLPGA 1556



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 89/189 (47%), Gaps = 41/189 (21%)

Query: 112  PGLQGPIGQ--KGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            PG QG  G   KG+ G+ GE G+ G       +G+ G PG  GP GPQG  G  G++G K
Sbjct: 1195 PGSQGTPGLSIKGDKGSPGERGLPGVGSGVAAKGDPGEPGSSGPQGPQGPRGVTGQKGAK 1254

Query: 164  GD-----MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR----- 213
            G+      G PGP+G  GD G RGP+G    PG  G  G  G  G PG DG  G      
Sbjct: 1255 GEPAESVEGQPGPKGNTGDPGDRGPRGP---PGESGTKGDRGQAGAPGSDGAKGDRGPSG 1311

Query: 214  ----------------NGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSG 254
                             G+ G+PG +GLPG+    G PG  G  G+KG    +G RG  G
Sbjct: 1312 PAGDKGDKGSAGPSGPQGLRGLPGSNGLPGEKGERGFPGPAGAKGDKGDAAQKGERGAPG 1371

Query: 255  INGVPGTPA 263
              G PG P 
Sbjct: 1372 A-GEPGQPG 1379



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 87/175 (49%), Gaps = 16/175 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-----GPPGPQGIPGDEGKRGPKGDM 166
            PG QG  G KGE GA+G  G  G  G +G PG+      G PG +G+PG       KGD 
Sbjct: 1171 PGRQGVNGAKGEPGARGLPGQDGRPGSQGTPGLSIKGDKGSPGERGLPGVGSGVAAKGDP 1230

Query: 167  GYPG---PQGIPGDEGKRGPKGDMGYP-----GRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            G PG   PQG  G  G  G KG  G P     G+ G  G  G PG+ G  G PG +G  G
Sbjct: 1231 GEPGSSGPQGPQGPRGVTGQKGAKGEPAESVEGQPGPKGNTGDPGDRGPRGPPGESGTKG 1290

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG---INGVPGTPAICAYKRE 270
              G+ G PG DG  G  G +G  G  G +G+ G SG   + G+PG+  +   K E
Sbjct: 1291 DRGQAGAPGSDGAKGDRGPSGPAGDKGDKGSAGPSGPQGLRGLPGSNGLPGEKGE 1345



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 89/200 (44%), Gaps = 41/200 (20%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
               QG      +   PG  G  G +GE G  G +G++G +GE+G+ GV GP G +G  GD
Sbjct: 2325 TGFQGARGPGGQKGTPGKDGLPGMRGEKGEVGLIGLRGLKGERGSKGVCGPSGQKGDKGD 2384

Query: 157  E---------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE--- 204
                      G++G +G++G  GP G PG EG  G KGD G+ G  G  G  G  GE   
Sbjct: 2385 SGINGRPGLPGRKGEQGEVGLQGPIGSPGKEGLIGAKGDRGFDGVTGPKGAQGEKGERGP 2444

Query: 205  ---------------PGLDGIPGRNGMDGIPGKDGLPGKD--------------GIPGTN 235
                           PGL G  G  G  G  G  G  G+               GIPG  
Sbjct: 2445 PGIPGSPGPRGVDGPPGLTGPQGPAGGKGPEGLQGQKGERGPPGPGMVGPRGTPGIPGER 2504

Query: 236  GTNGEKGMTGPRGNRGKSGI 255
            G  GE G  G +G+RG++G+
Sbjct: 2505 GEQGEIGPEGSKGDRGEAGM 2524



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 93/236 (39%), Gaps = 63/236 (26%)

Query: 97   VAMQGFCNSTKEYCPPG--LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            V  QG      +  PPG  + GP G KGE+G  G+  + G  GE G PG+ GP G +G  
Sbjct: 2084 VGPQGLKGEQGDSGPPGKSVTGPPGMKGEMGPPGQT-LPGTPGESGLPGLQGPKGDKGPA 2142

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------------------------- 189
            G +G+RG  GD G PG  G+ G  G +G KG+ G                          
Sbjct: 2143 GIKGERGAAGDPGDPGENGVRGPPGPKGVKGEAGVGMTGPPGQPGPIGLKGDPGLPGPPG 2202

Query: 190  ----------PGRIGLDG---------------------RDGLPGEPGLDGIPGRNGMDG 218
                      PG  G  G                     + G PG PG  G PG  G  G
Sbjct: 2203 PPGPRGLDGTPGLAGQRGEAGQPGPPGLPGERGLNGIIGKTGNPGTPGDAGPPGPTGAAG 2262

Query: 219  IPGKDGLPGK----DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            +PG  G  G+     G PG  G  GE G  GP+G +G+ G  G  G P     + E
Sbjct: 2263 LPGLKGDKGETQLVGGPPGEKGVKGETGERGPKGGQGEKGAKGQEGPPGEQGLRGE 2318



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 93/205 (45%), Gaps = 56/205 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKGDMGYP 169
            G+QGP G +G  G  G  G  G  GE G PGV G    PG  G+PG  GK+G  G +G  
Sbjct: 2028 GVQGPPGPQGNRGLPGPAGTPGAIGEGGKPGVPGRDGAPGKDGLPGLNGKQGIAGPVG-- 2085

Query: 170  GPQGIPGDEGKRGP-----------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             PQG+ G++G  GP           KG+MG PG+        LPG PG  G+PG  G  G
Sbjct: 2086 -PQGLKGEQGDSGPPGKSVTGPPGMKGEMGPPGQT-------LPGTPGESGLPGLQGPKG 2137

Query: 219  IPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGIN------------------- 256
              G  G+ G+ G    PG  G NG +G  GP+G +G++G+                    
Sbjct: 2138 DKGPAGIKGERGAAGDPGDPGENGVRGPPGPKGVKGEAGVGMTGPPGQPGPIGLKGDPGL 2197

Query: 257  ----------GVPGTPAICAYKRES 271
                      G+ GTP +   + E+
Sbjct: 2198 PGPPGPPGPRGLDGTPGLAGQRGEA 2222



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 81/206 (39%), Gaps = 77/206 (37%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            L+G  G+KGE G  GE G KG +GE GA G  G              GP+G  G PG +G
Sbjct: 1511 LRGEKGEKGEAGDPGEHGAKGLKGEAGAQGTAG------------SSGPEGQRGLPGARG 1558

Query: 174  IPGDEGKRGPKGDM--------------------GYPGRIGLDGRDGLP----------- 202
             PGD G  G K  +                    G  G  GLDGR G             
Sbjct: 1559 DPGDRGSPGEKTSLIDYYIDKDDASAFGMHWYSDGERGAAGLDGRPGQDGKPGPPGPPGL 1618

Query: 203  -------GEPGLDGI------------------------PGRNGMDGIPGKDGLPGKDGI 231
                   G+PG DG+                         G +G  G+PGK    G+DG+
Sbjct: 1619 RGDPGKQGDPGRDGLAGLRGPQGPPGPPGPPGADGTPGKAGEDGKSGLPGKT---GEDGV 1675

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGING 257
            PG +G  G+KG  GP G  G+ GI G
Sbjct: 1676 PGEDGRKGDKGEQGPAGRDGRDGIKG 1701



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 70/129 (54%), Gaps = 10/129 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL+G  GQ G+ G KG+ G  GE G  G PG +GP GP+G  G +G  GP GD+      
Sbjct: 1451 GLRGLPGQSGQPGTKGDTGDPGEDGRNGTPGTMGPRGPKGDQGIQGPPGPPGDV------ 1504

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
               G++  RG KG+ G  G  G  G  GL GE G  G  G +G +   G+ GLPG  G P
Sbjct: 1505 -TTGEKQLRGEKGEKGEAGDPGEHGAKGLKGEAGAQGTAGSSGPE---GQRGLPGARGDP 1560

Query: 233  GTNGTNGEK 241
            G  G+ GEK
Sbjct: 1561 GDRGSPGEK 1569



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 63/128 (49%), Gaps = 25/128 (19%)

Query: 137  GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-IGL 195
            G+KG  G VGP GP G           G  G PG +G+ G++G++GP G  G  GR IG 
Sbjct: 1824 GKKGEKGEVGPRGPSGA---------DGARGLPGERGMKGEQGEKGPAGPQGPTGRAIGE 1874

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G +G PG+ G             PGK   PG  G+PG  G  GE G  G +G++G+ G 
Sbjct: 1875 RGPEGPPGQAGE------------PGK---PGIPGVPGRAGELGEAGRPGEKGDKGERGD 1919

Query: 256  NGVPGTPA 263
             G  G  A
Sbjct: 1920 KGPAGDSA 1927



 Score = 39.7 bits (91), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 32/59 (54%)

Query: 99   MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G      E   PG  G  G KGE GA+G  G  G  G++G PG  G PG +G PG++
Sbjct: 1511 LRGEKGEKGEAGDPGEHGAKGLKGEAGAQGTAGSSGPEGQRGLPGARGDPGDRGSPGEK 1569


>gi|426234501|ref|XP_004011234.1| PREDICTED: collagen alpha-1(X) chain [Ovis aries]
          Length = 674

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 85/151 (56%), Gaps = 12/151 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEK---------GAPGVVGPPGPQGIPGDEGKRGP 162
           PGL G  GQ+G +G  G  G KGE+G           G  G +GP GP+GIPGD G  GP
Sbjct: 301 PGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPGGAGLPGPSGNMGPQGPKGIPGDPGLPGP 360

Query: 163 KGDMGYPGPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           KG+MG  GP G PG +G+RG  G     GYPG  GL+G  G PG PG  G PG  G  G+
Sbjct: 361 KGEMGPVGPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGIAGSPGL 420

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           PG  G  G  G+PG NG  G +G+ G  G R
Sbjct: 421 PGPVGPAGAKGVPGHNGEAGPRGVPGIPGTR 451



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 91/188 (48%), Gaps = 44/188 (23%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-----------------PQGIPGDEGKR 160
           IG+ G  G  G+ GV G +G  GAPG+ G PG                 P G+PG  G +
Sbjct: 263 IGKPGAPGTPGQPGVPGMKGHPGAPGIAGLPGAPGFGKPGLPGLKGQRGPVGLPGSPGAK 322

Query: 161 G---------------PKGDMGYPGPQGIPGDEGKRGPKGDM------------GYPGRI 193
           G               P G+MG  GP+GIPGD G  GPKG+M            G  G  
Sbjct: 323 GEQGPAGHPGGAGLPGPSGNMGPQGPKGIPGDPGLPGPKGEMGPVGPAGNPGAKGERGSS 382

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           GLDG+ G PGEPGL+G  G  G+ G  G  G+ G  G+PG  G  G KG+ G  G  G  
Sbjct: 383 GLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGIAGSPGLPGPVGPAGAKGVPGHNGEAGPR 442

Query: 254 GINGVPGT 261
           G+ G+PGT
Sbjct: 443 GVPGIPGT 450



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 89/217 (41%), Gaps = 62/217 (28%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------------- 162
           G+ G  G  GE G +G  GEKGAPGV   PG  G  G+ G   P                
Sbjct: 156 GKPGPQGPTGEPGPRGFTGEKGAPGV---PGLNGQKGETGYCAPCRPGERGLPGPQGPTG 212

Query: 163 ---------KGDMGYPGPQGIPGDEGKR-----------------------GPKGDMGYP 190
                    +G+ G PG  G+ GD+G                         G  G  G P
Sbjct: 213 PPGPPGVGKRGENGLPGQPGLKGDQGVPGERGPAGPPGPQGPPGEQGPEGIGKPGAPGTP 272

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMD--GIPGKDGLPGKDGIPGTNGTNGEKG------ 242
           G+ G+ G  G PG PG+ G+PG  G    G+PG  G  G  G+PG+ G  GE+G      
Sbjct: 273 GQPGVPGMKGHPGAPGIAGLPGAPGFGKPGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPG 332

Query: 243 ---MTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
              + GP GN G  G  G+PG P +   K E   + P
Sbjct: 333 GAGLPGPSGNMGPQGPKGIPGDPGLPGPKGEMGPVGP 369



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 76/195 (38%), Gaps = 74/195 (37%)

Query: 144 VVGPPGPQGIPGDEGKR---GPKGDM--------------------------GYPGPQGI 174
             G PG  G+PG +G+R   GPKGD+                          G PGPQG 
Sbjct: 104 ATGKPGLPGLPGKQGERGLNGPKGDIGPAGLPGPRGPPGPPGSPGPAGISVPGKPGPQGP 163

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDG-----LPGEPG--------------LDGIPGRNG 215
            G+ G RG  G+ G PG  GL+G+ G      P  PG                   G+ G
Sbjct: 164 TGEPGPRGFTGEKGAPGVPGLNGQKGETGYCAPCRPGERGLPGPQGPTGPPGPPGVGKRG 223

Query: 216 MDGIPGKDGLPGKDGI--------------------------PGTNGTNGEKGMTGPRGN 249
            +G+PG+ GL G  G+                          PG  GT G+ G+ G +G+
Sbjct: 224 ENGLPGQPGLKGDQGVPGERGPAGPPGPQGPPGEQGPEGIGKPGAPGTPGQPGVPGMKGH 283

Query: 250 RGKSGINGVPGTPAI 264
            G  GI G+PG P  
Sbjct: 284 PGAPGIAGLPGAPGF 298


>gi|395506153|ref|XP_003757400.1| PREDICTED: collagen alpha-1(XXVII) chain [Sarcophilus harrisii]
          Length = 1916

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 83/143 (58%), Gaps = 6/143 (4%)

Query: 135  ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP---KGDMGYPG 191
            +RG++G PG  G PG +G  G  GK G +G  G+PGP+G PG +G +G    KG  G  G
Sbjct: 1409 DRGDRGEPGDPGYPGQEGFEGSRGKAGQQGLPGHPGPRGRPGPKGSKGEEGQKGKQGKRG 1468

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKGMTGPRG 248
              G  G  GL G+PG  G+ GR G +G PG+DG+PGKDG     G  G +GE G  GP G
Sbjct: 1469 EAGSRGMQGLVGQPGPRGVVGRQGQEGPPGQDGIPGKDGRAGHQGEQGDDGEVGPIGPAG 1528

Query: 249  NRGKSGINGVPGTPAICAYKRES 271
             RG  G+ G+PG      +K ES
Sbjct: 1529 RRGNPGVAGLPGAQGPPGFKGES 1551



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            +G         P GL GP+G+   KG  GA GE G+ GE G KG  G +G PG QG+ G 
Sbjct: 1181 KGVPGEAGPQGPQGLIGPLGEIGPKGPPGALGEPGLPGEAGMKGDFGPLGIPGEQGLVGQ 1240

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------ 210
             G+ G +GD G  GP G+ GD+G+ GP G+ G  G+ GL G++G PG PG+ G+      
Sbjct: 1241 RGETGLEGDSGPAGPDGLKGDKGEPGPDGERGEKGKEGLKGKEGPPGYPGITGVRGPEGK 1300

Query: 211  PGRNGMDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            PG+ G  G  G              G+PG+ G  G  G  G +G  GP G  G+ G  G 
Sbjct: 1301 PGKQGEKGRTGPKGAKGYQGHLGEMGVPGEAGPAGNQGPKGSRGTLGPTGAPGRMGAQGE 1360

Query: 259  PGTPAICAYK 268
            PG P    +K
Sbjct: 1361 PGLPGYDGHK 1370



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/147 (44%), Positives = 83/147 (56%), Gaps = 6/147 (4%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KGE G KG+ G +GE G +G  G+VG PGP+G+ G +G+ GP      PG
Sbjct: 1445 PRGRPGPKGSKGEEGQKGKQGKRGEAGSRGMQGLVGQPGPRGVVGRQGQEGP------PG 1498

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              GIPG +G+ G +G+ G  G +G  G  G  G PG+ G+PG  G  G  G+ GLPG+ G
Sbjct: 1499 QDGIPGKDGRAGHQGEQGDDGEVGPIGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLG 1558

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGING 257
              G  GT G  G  G +G  G  G  G
Sbjct: 1559 PTGKRGTEGGTGFPGSQGEPGSKGQPG 1585



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 89/168 (52%), Gaps = 12/168 (7%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            +V  QG      +   PG  G  G +GE G  GE+G  G  G +G PGV G PG QG PG
Sbjct: 1487 VVGRQGQEGPPGQDGIPGKDGRAGHQGEQGDDGEVGPIGPAGRRGNPGVAGLPGAQGPPG 1546

Query: 156  ------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                          GKRG +G  G+PG QG PG +G+ G  G+MG+PG  GL G  G PG
Sbjct: 1547 FKGESGLPGQLGPTGKRGTEGGTGFPGSQGEPGSKGQPGDFGEMGFPGIAGLFGPKGPPG 1606

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            + G  GI G  G  G+ GK+G+ G  GI G +G  G KG  G RG+ G
Sbjct: 1607 DIGFKGIQGPRGPPGLMGKEGVIGPLGILGPSGIPGPKGNKGSRGDLG 1654



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 91/184 (49%), Gaps = 33/184 (17%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP------ 171
            +G +G  G +G  G  G  GE G+ GV GPPG QG  G +G++G +G+ G  GP      
Sbjct: 1112 LGMRGTKGRRGPRGPDGPAGEPGSKGVKGPPGTQGKQGLDGQQGQEGERGELGPRGFPGI 1171

Query: 172  ---------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG------------I 210
                     +G+PG+ G +GP+G +G  G IG  G  G  GEPGL G            I
Sbjct: 1172 PGPSGPPGAKGVPGEAGPQGPQGLIGPLGEIGPKGPPGALGEPGLPGEAGMKGDFGPLGI 1231

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV------PGTPAI 264
            PG  G+ G  G+ GL G  G  G +G  G+KG  GP G RG+ G  G+      PG P I
Sbjct: 1232 PGEQGLVGQRGETGLEGDSGPAGPDGLKGDKGEPGPDGERGEKGKEGLKGKEGPPGYPGI 1291

Query: 265  CAYK 268
               +
Sbjct: 1292 TGVR 1295



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 81/169 (47%), Gaps = 24/169 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G  G+ G  G  G  G+ GE+G PG+ G PG  G PG  G  G  GDMG  GP 
Sbjct: 828 GERGPPGAHGKRGKMGRPGFPGDFGERGPPGLDGNPGELGAPGPPGVHGLIGDMGAIGPI 887

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG +G +G  G++G  G  G  G  GLPG PG  G  G  G  GI    GLPG  G P
Sbjct: 888 GYPGPKGMKGLMGNIGEHGLKGDKGEQGLPGVPGDIGFQGDKGSQGI---SGLPGARGKP 944

Query: 233 GTNGTNGEK---------------------GMTGPRGNRGKSGINGVPG 260
           G  G  G+K                     G  GP G +GK G  G+PG
Sbjct: 945 GPTGKVGDKGPVGFPGPPGPEGFPGDIGPPGQNGPEGAKGKPGARGLPG 993



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 86/165 (52%), Gaps = 24/165 (14%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           +GE G +G +G KG  G +G PG +G PGP+G          +G +G PG  G+PG +G+
Sbjct: 779 QGEPGPEGSLGAKGYPGRQGLPGPIGEPGPKGS---------RGYIGLPGLFGLPGLDGE 829

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           RGP G  G  G++   GR G PG+      PGLDG PG  G  G PG  GL G  G  G 
Sbjct: 830 RGPPGAHGKRGKM---GRPGFPGDFGERGPPGLDGNPGELGAPGPPGVHGLIGDMGAIGP 886

Query: 235 NGTNGEKGMTGPRGNRGKSGI------NGVPGTPAICAYKRESCS 273
            G  G KGM G  GN G+ G+       G+PG P    ++ +  S
Sbjct: 887 IGYPGPKGMKGLMGNIGEHGLKGDKGEQGLPGVPGDIGFQGDKGS 931



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 84/163 (51%), Gaps = 21/163 (12%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEGKRGPKGDM 166
           GQKG+ G        G++G+ G PG+ G PGP G  G            D+G+ GP+G +
Sbjct: 729 GQKGDPGLSPGKAYDGDKGDVGLPGLTGIPGPTGRKGLKGYPGPPGHPGDQGEPGPEGSL 788

Query: 167 G---YPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G   YPG QG+PG  G+ GPKG  GY   PG  GL G DG  G PG  G  G+ G  G P
Sbjct: 789 GAKGYPGRQGLPGPIGEPGPKGSRGYIGLPGLFGLPGLDGERGPPGAHGKRGKMGRPGFP 848

Query: 221 ---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G+ G PG DG PG  G  G  G+ G  G+ G  G  G PG
Sbjct: 849 GDFGERGPPGLDGNPGELGAPGPPGVHGLIGDMGAIGPIGYPG 891



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 92/209 (44%), Gaps = 45/209 (21%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G         P G  GP G KG +G  GE G+KG++GE+G PGV G  G QG  G +
Sbjct: 873  GVHGLIGDMGAIGPIGYPGPKGMKGLMGNIGEHGLKGDKGEQGLPGVPGDIGFQGDKGSQ 932

Query: 158  GKRGPKGDMGYPGPQGIPGDE---------------------GKRGPKGDMGYPGRIGLD 196
            G  G  G  G PGP G  GD+                     G+ GP+G  G PG  GL 
Sbjct: 933  GISGLPGARGKPGPTGKVGDKGPVGFPGPPGPEGFPGDIGPPGQNGPEGAKGKPGARGLP 992

Query: 197  GRDG------------------LPGEPGLDGIPGRNGMDGI---PGKDGLPGK---DGIP 232
            G  G                  L G+PG  G PGR G DG    PG  G PG+    G+ 
Sbjct: 993  GPRGQLGQEGDEGPTGPPGSPGLEGQPGRKGFPGRPGPDGPKGEPGNSGRPGRMGEQGLM 1052

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  GE G+ G +G+RG  G  G PG 
Sbjct: 1053 GFIGLVGEPGIVGEKGSRGAMGPPGAPGA 1081



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 99/243 (40%), Gaps = 82/243 (33%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA------------PGVVGP 147
            QG      E    G  GP G  G  G KGE G  GERGEKG             PG+ G 
Sbjct: 1235 QGLVGQRGETGLEGDSGPAGPDGLKGDKGEPGPDGERGEKGKEGLKGKEGPPGYPGITGV 1294

Query: 148  PGPQGIPGDEGKR---GPK---------GDMGYPGPQGIPGDEGKRGPKGDM---GYPGR 192
             GP+G PG +G++   GPK         G+MG PG  G  G++G +G +G +   G PGR
Sbjct: 1295 RGPEGKPGKQGEKGRTGPKGAKGYQGHLGEMGVPGEAGPAGNQGPKGSRGTLGPTGAPGR 1354

Query: 193  IGLDGRDGLP-------------------------------------------------G 203
            +G  G  GLP                                                 G
Sbjct: 1355 MGAQGEPGLPGYDGHKGLSGPIGPPGPKGEKGEQGDDGKIEGPPGPPGDRGPVGDRGDRG 1414

Query: 204  EPGLDGIPGRNGMDGIPGKDGL------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            EPG  G PG+ G +G  GK G       PG  G PG  G+ GE+G  G +G RG++G  G
Sbjct: 1415 EPGDPGYPGQEGFEGSRGKAGQQGLPGHPGPRGRPGPKGSKGEEGQKGKQGKRGEAGSRG 1474

Query: 258  VPG 260
            + G
Sbjct: 1475 MQG 1477



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 99/245 (40%), Gaps = 60/245 (24%)

Query: 89   NAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP 148
             A+ +   +   GF     E  PPGL G     GE+GA G  GV G  G+ GA G +G P
Sbjct: 834  GAHGKRGKMGRPGFPGDFGERGPPGLDG---NPGELGAPGPPGVHGLIGDMGAIGPIGYP 890

Query: 149  GP---------------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG-- 185
            GP                     QG+PG  G  G +GD G  G  G+PG  GK GP G  
Sbjct: 891  GPKGMKGLMGNIGEHGLKGDKGEQGLPGVPGDIGFQGDKGSQGISGLPGARGKPGPTGKV 950

Query: 186  -------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----------- 215
                               D+G PG+ G +G  G PG  GL G  G+ G           
Sbjct: 951  GDKGPVGFPGPPGPEGFPGDIGPPGQNGPEGAKGKPGARGLPGPRGQLGQEGDEGPTGPP 1010

Query: 216  ----MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
                ++G PG+ G PG+ G  G  G  G  G  G  G +G  G  G+ G P I   K   
Sbjct: 1011 GSPGLEGQPGRKGFPGRPGPDGPKGEPGNSGRPGRMGEQGLMGFIGLVGEPGIVGEKGSR 1070

Query: 272  CSLLP 276
             ++ P
Sbjct: 1071 GAMGP 1075



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 83/181 (45%), Gaps = 39/181 (21%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKG---------APGVVGPPGPQGIPGDEGKRG 161
            PPG  GP G KG+ GA+G  G +G+ G++G         +PG+ G PG +G PG  G  G
Sbjct: 973  PPGQNGPEGAKGKPGARGLPGPRGQLGQEGDEGPTGPPGSPGLEGQPGRKGFPGRPGPDG 1032

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            PKG+         PG+ G+ G  G+ G  G IGL G  G+ GE G  G  G  G  G  G
Sbjct: 1033 PKGE---------PGNSGRPGRMGEQGLMGFIGLVGEPGIVGEKGSRGAMGPPGAPGAKG 1083

Query: 222  KDGLPGKD---------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G PG                       G+ GT G  G +G  GP G  G  G+ G PG
Sbjct: 1084 SMGHPGSAGGVGDPGDPGPPGPPGPRGPLGMRGTKGRRGPRGPDGPAGEPGSKGVKGPPG 1143

Query: 261  T 261
            T
Sbjct: 1144 T 1144



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 85/170 (50%), Gaps = 27/170 (15%)

Query: 112  PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--- 165
            PG +G +GQ+G+    G  G  G++G+ G KG PG  GP GP+G PG+ G+ G  G+   
Sbjct: 992  PGPRGQLGQEGDEGPTGPPGSPGLEGQPGRKGFPGRPGPDGPKGEPGNSGRPGRMGEQGL 1051

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP-------------------- 205
            MG+ G  G PG  G++G +G MG PG  G  G  G PG                      
Sbjct: 1052 MGFIGLVGEPGIVGEKGSRGAMGPPGAPGAKGSMGHPGSAGGVGDPGDPGPPGPPGPRGP 1111

Query: 206  -GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G+ G  GR G  G  G  G PG  G+ G  GT G++G+ G +G  G+ G
Sbjct: 1112 LGMRGTKGRRGPRGPDGPAGEPGSKGVKGPPGTQGKQGLDGQQGQEGERG 1161



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 85/199 (42%), Gaps = 42/199 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG------APGVVGPPGPQGIPGDEGKRGPKGD 165
            PG  GP G KGE G  G  G  GE+G  G       PG+VG  G +G  G  G  G KG 
Sbjct: 1025 PGRPGPDGPKGEPGNSGRPGRMGEQGLMGFIGLVGEPGIVGEKGSRGAMGPPGAPGAKGS 1084

Query: 166  MGYPGPQ---------------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            MG+PG                       G+ G +G+RGP+G  G  G  G  G  G PG 
Sbjct: 1085 MGHPGSAGGVGDPGDPGPPGPPGPRGPLGMRGTKGRRGPRGPDGPAGEPGSKGVKGPPGT 1144

Query: 205  PGLDGIPGRNGMDGIPGKDG------------LPGKDGIPGTNGTNGEKGMTGPRGN--- 249
             G  G+ G+ G +G  G+ G             PG  G+PG  G  G +G+ GP G    
Sbjct: 1145 QGKQGLDGQQGQEGERGELGPRGFPGIPGPSGPPGAKGVPGEAGPQGPQGLIGPLGEIGP 1204

Query: 250  RGKSGINGVPGTPAICAYK 268
            +G  G  G PG P     K
Sbjct: 1205 KGPPGALGEPGLPGEAGMK 1223



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 83/202 (41%), Gaps = 42/202 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIPGDE----------- 157
            PG  G  G  G IG  GE G+ GE+G +GA   PG  G  G  G PG             
Sbjct: 1043 PGRMGEQGLMGFIGLVGEPGIVGEKGSRGAMGPPGAPGAKGSMGHPGSAGGVGDPGDPGP 1102

Query: 158  ----------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG- 206
                      G RG KG  G  GP G  G+ G +G KG  G  G+ GLDG+ G  GE G 
Sbjct: 1103 PGPPGPRGPLGMRGTKGRRGPRGPDGPAGEPGSKGVKGPPGTQGKQGLDGQQGQEGERGE 1162

Query: 207  -----------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                               G+PG  G  G  G  G  G+ G  G  G  GE G+ G  G 
Sbjct: 1163 LGPRGFPGIPGPSGPPGAKGVPGEAGPQGPQGLIGPLGEIGPKGPPGALGEPGLPGEAGM 1222

Query: 250  RGKSGINGVPGTPAICAYKRES 271
            +G  G  G+PG   +   + E+
Sbjct: 1223 KGDFGPLGIPGEQGLVGQRGET 1244


>gi|311260227|ref|XP_003128387.1| PREDICTED: collagen alpha-1(XXI) chain [Sus scrofa]
          Length = 957

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 97/193 (50%), Gaps = 42/193 (21%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGE---------KGAPGVVGPPGPQGI------- 153
           CPPG  G  G+KG+ G  G  G  G+ G+          G+PGV G PG QG        
Sbjct: 446 CPPGKPGLQGRKGDPGQPGNPGYPGQPGQDGKPGYQGVAGSPGVPGSPGIQGARGLPGYR 505

Query: 154 --PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEP 205
             PG +G++G +G  G+PG  G+PG +G+ GPKGD G PG  G  G        G PG P
Sbjct: 506 GEPGRDGEKGDRGLPGFPGLHGMPGSKGEMGPKGDKGSPGFYGKKGAKGEKGTVGFPGLP 565

Query: 206 GLDGIPGRNGMDGI---------------PGKDGL---PGKDGIPGTNGTNGEKGMTGPR 247
           G  G PGR+G DG+               PG+DGL   PG  G PG  G  G+KG  GP 
Sbjct: 566 GRAGEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGLRGEPGIPGFPGNQGLMGQKGEIGPP 625

Query: 248 GNRGKSGINGVPG 260
           G  GK G  G+PG
Sbjct: 626 GPLGKKGAPGIPG 638



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 105/213 (49%), Gaps = 27/213 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG---------------------EKGAPGVVGPPGP 150
           PG QG +GQKGEIG  G +G KG  G                      KG PG+ G PG 
Sbjct: 610 PGNQGLMGQKGEIGPPGPLGKKGAPGIPGLMGSDGPPGQPGTPGPKGNKGEPGLQGLPGA 669

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+ G+ G  GP G+ GY G  GI G +G +G +G+ G  G+ G +GR G+PG+ G+ G 
Sbjct: 670 SGLKGEPGAVGPPGEPGYLGLPGIQGKKGDKGNQGEKGIQGQKGENGRPGIPGQQGIQGH 729

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGTPAI 264
           PG  G  G  G+ G  G  G  G +G +G  G  GP+G  G++      G++G PG    
Sbjct: 730 PGAKGERGEKGEPGARGATGPKGESGVDGVMGPAGPQGQPGETGPQGPPGLDGKPGREFS 789

Query: 265 CAYKRESCSLLPNSETSQLLIPPTIVGSEHIFS 297
             + R+ C+ +  ++   LL    I   +H  S
Sbjct: 790 EQFIRQVCTDVLRAQLPALLQSGRIQSCDHCQS 822



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 89/164 (54%), Gaps = 18/164 (10%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           +G  G  G  GE G  G+ G  G+PG  G  GP G PG +G RG  G  G+PG QG+ G 
Sbjct: 559 VGFPGLPGRAGEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGLRGEPGIPGFPGNQGLMGQ 618

Query: 178 EGKRGPKGDMG---YPGRIGLDGRDGLP------------GEPGLDGIPGRNGMDGIPGK 222
           +G+ GP G +G    PG  GL G DG P            GEPGL G+PG +G+ G PG 
Sbjct: 619 KGEIGPPGPLGKKGAPGIPGLMGSDGPPGQPGTPGPKGNKGEPGLQGLPGASGLKGEPGA 678

Query: 223 DGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G PG+    G+PG  G  G+KG  G +G +G+ G NG PG P 
Sbjct: 679 VGPPGEPGYLGLPGIQGKKGDKGNQGEKGIQGQKGENGRPGIPG 722



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 76/161 (47%), Gaps = 27/161 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G +G KG PG  G PG  G PG +GK G +G  G PG  G PG +G RG  G  G P
Sbjct: 449 GKPGLQGRKGDPGQPGNPGYPGQPGQDGKPGYQGVAGSPGVPGSPGIQGARGLPGYRGEP 508

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRN---------------------------GMDGIPGKD 223
           GR G  G  GLPG PGL G+PG                             G  G+PG+ 
Sbjct: 509 GRDGEKGDRGLPGFPGLHGMPGSKGEMGPKGDKGSPGFYGKKGAKGEKGTVGFPGLPGRA 568

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG+ G  G  G+ G KG  GP G  G+ G+ G PG P  
Sbjct: 569 GEPGRHGKDGLMGSPGYKGEAGPPGAPGQDGLRGEPGIPGF 609



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 95/221 (42%), Gaps = 66/221 (29%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   S      PG+QG    +G  G +GE G  GE+G++G PG    PG  G+PG +G+
Sbjct: 481 QGVAGSPGVPGSPGIQG---ARGLPGYRGEPGRDGEKGDRGLPGF---PGLHGMPGSKGE 534

Query: 160 RGPKGD------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIG------L 195
            GPKGD                  +G+PG  G  G+ G+ G  G MG PG  G       
Sbjct: 535 MGPKGDKGSPGFYGKKGAKGEKGTVGFPGLPGRAGEPGRHGKDGLMGSPGYKGEAGPPGA 594

Query: 196 DGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGL--------------- 225
            G+DGL GEPG+ G PG  G+                G PG  GL               
Sbjct: 595 PGQDGLRGEPGIPGFPGNQGLMGQKGEIGPPGPLGKKGAPGIPGLMGSDGPPGQPGTPGP 654

Query: 226 ------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                 PG  G+PG +G  GE G  GP G  G  G+ G+ G
Sbjct: 655 KGNKGEPGLQGLPGASGLKGEPGAVGPPGEPGYLGLPGIQG 695



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 37/96 (38%), Gaps = 34/96 (35%)

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR------------- 247
            PG PG DG+PG  G  G PG  GL    G+PG NG  G +G+  P              
Sbjct: 844 FPGLPGRDGVPGLMGAPGRPGAKGL---KGLPGRNGAKGSQGLGYPGEQGPPGPPGPEGP 900

Query: 248 ------------------GNRGKSGINGVPGTPAIC 265
                             G+ GK G  G PG P IC
Sbjct: 901 PGISKEGPPGDPGLPGKDGDHGKPGTQGQPGPPGIC 936


>gi|348540676|ref|XP_003457813.1| PREDICTED: collagen alpha-1(XI) chain-like [Oreochromis niloticus]
          Length = 1744

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 106/219 (48%), Gaps = 31/219 (14%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKG---------EMGVKGERGEKGAPGVVGPPGP- 150
           GF  S       G +GP GQ G  G +G           G  G+ GEKGA G  GPPGP 
Sbjct: 767 GFPGSVGALGEKGKKGPAGQPGSAGQRGPNGARGARGARGPTGKSGEKGASGHDGPPGPS 826

Query: 151 -----QGIPGDEGKRGPKGDMG---------YPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                QG+ G  G+ GPKG +G         +PG +G PG +GK GP G  G  G  G  
Sbjct: 827 GERGPQGLQGRNGEPGPKGAVGPAGKDGLPGHPGQRGEPGFQGKTGPPGPSGVVGPQGKS 886

Query: 197 GRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G PG+   PG  G+PG +G+ G  GK+G  G  G+PGT+G NG  GM G RG+RG  
Sbjct: 887 GEPGPPGDRGHPGAPGVPGEHGLPGTAGKEGGKGDPGLPGTSGKNGPPGMKGFRGSRGAP 946

Query: 254 GINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGS 292
           GI G PG       +    ++ P  E      PP   G+
Sbjct: 947 GIMGPPGLKGGSGPRGSPGAIGPTGERG----PPGSAGA 981



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/147 (44%), Positives = 84/147 (57%), Gaps = 12/147 (8%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG+QGP+G  G+ G KG  G++G +G KG  G        G PG +G+ G KGD+G  G
Sbjct: 660 PPGVQGPVGYPGQRGVKGADGLRGLKGSKGEKGE------DGFPGAKGEMGAKGDVGDNG 713

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
             G  G++G  GPKG +G  G  GL    G+PGE G  G+P   G+ G PG+ G  G DG
Sbjct: 714 APGSRGEDGPEGPKGQLGPQGEAGL---IGIPGEKGKLGVP---GLPGFPGRQGPKGSDG 767

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG+ G  GEKG  GP G  G +G  G
Sbjct: 768 FPGSVGALGEKGKKGPAGQPGSAGQRG 794



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 88/177 (49%), Gaps = 18/177 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYP 169
           G+ G  G KG IG  GE+G  G++G    PG++G PGPQG+   PG++G +G KG  G P
Sbjct: 581 GIDGAQGSKGNIGPPGEVGAPGQQGN---PGIIGFPGPQGLVGLPGEKGPQGKKGMRGLP 637

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G P            G+PGR G  G  GLPG PG+ G  G  G  G+ G DGL G  
Sbjct: 638 GNDGPP------------GHPGREGTPGEKGLPGPPGVQGPVGYPGQRGVKGADGLRGLK 685

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           G  G  G +G  G  G  G +G  G NG PG+      +     L P  E   + IP
Sbjct: 686 GSKGEKGEDGFPGAKGEMGAKGDVGDNGAPGSRGEDGPEGPKGQLGPQGEAGLIGIP 742



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 96/211 (45%), Gaps = 60/211 (28%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IP 154
           GL+G  G+KGE    GAKGEMG KG+ G+ GAPG  G  GP+G               IP
Sbjct: 683 GLKGSKGEKGEDGFPGAKGEMGAKGDVGDNGAPGSRGEDGPEGPKGQLGPQGEAGLIGIP 742

Query: 155 GDEGK------------RGPKGDMGYP------------GPQGIPGDEGKRGPK------ 184
           G++GK            +GPKG  G+P            GP G PG  G+RGP       
Sbjct: 743 GEKGKLGVPGLPGFPGRQGPKGSDGFPGSVGALGEKGKKGPAGQPGSAGQRGPNGARGAR 802

Query: 185 ------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                 G  G  G  G DG  G  GE G  G+ GRNG  G  G  G  GKDG+PG  G  
Sbjct: 803 GARGPTGKSGEKGASGHDGPPGPSGERGPQGLQGRNGEPGPKGAVGPAGKDGLPGHPGQR 862

Query: 239 GEKGMTGPRGNRGKSGI------NGVPGTPA 263
           GE G  G  G  G SG+      +G PG P 
Sbjct: 863 GEPGFQGKTGPPGPSGVVGPQGKSGEPGPPG 893



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 21/145 (14%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G++G  G +G+ G +GPPG  G PG +G     G +G+PGPQG+            +G 
Sbjct: 577 QGIRGIDGAQGSKGNIGPPGEVGAPGQQGN---PGIIGFPGPQGL------------VGL 621

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGM 243
           PG  G  G+ G+ G PG DG PG  G +G PG+ GLPG  G+      PG  G  G  G+
Sbjct: 622 PGEKGPQGKKGMRGLPGNDGPPGHPGREGTPGEKGLPGPPGVQGPVGYPGQRGVKGADGL 681

Query: 244 TGPRGNRGKSGINGVPGTPAICAYK 268
            G +G++G+ G +G PG       K
Sbjct: 682 RGLKGSKGEKGEDGFPGAKGEMGAK 706



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 88/198 (44%), Gaps = 30/198 (15%)

Query: 106  TKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVV---GPPGPQGIPGDEGK 159
            + E  P GLQG  G+   KG +G  G+ G+ G  G++G PG     GPPGP G+ G +GK
Sbjct: 826  SGERGPQGLQGRNGEPGPKGAVGPAGKDGLPGHPGQRGEPGFQGKTGPPGPSGVVGPQGK 885

Query: 160  R---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
                GP GD G+PG  G+PG+          G PG  G +G  G PG PG  G  G  GM
Sbjct: 886  SGEPGPPGDRGHPGAPGVPGEH---------GLPGTAGKEGGKGDPGLPGTSGKNGPPGM 936

Query: 217  DGIPGKDGLPGKDGIPGTN------------GTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  G PG  G PG              G  GE+G  G  G  G+ G  G  G P  
Sbjct: 937  KGFRGSRGAPGIMGPPGLKGGSGPRGSPGAIGPTGERGPPGSAGAIGQPGRAGAIGGPGP 996

Query: 265  CAYKRESCSLLPNSETSQ 282
               K E     P     Q
Sbjct: 997  MGEKGEPGEKGPIGPAGQ 1014



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 84/173 (48%), Gaps = 24/173 (13%)

Query: 106  TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            T E  PPG  G IGQ G  GA   +G  G  GEKG PG  GP GP G  GD+G  G  G 
Sbjct: 970  TGERGPPGSAGAIGQPGRAGA---IGGPGPMGEKGEPGEKGPIGPAGQDGDQGPVGMIGA 1026

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIG---------------LDGRDGLPGEPGLDGI 210
            MG  GP G  GD      KG+ G PG+ G                 G  G PG PGLDG+
Sbjct: 1027 MGPAGPAGEDGD------KGEQGKPGQKGSKGDKGEGGPPGPTGPQGPIGQPGLPGLDGL 1080

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            PG  G  G+ G  G  G  G  G+ G  G +GM G  G +G+SG  G+ G P 
Sbjct: 1081 PGPRGQQGMYGPKGDEGPRGFKGSTGPIGLQGMPGLPGEKGESGHVGLMGPPG 1133



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 80/179 (44%), Gaps = 24/179 (13%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            QG      E  P G  GP G+ G     G +GE G +G+ G  G  GVVGP G  G PG 
Sbjct: 832  QGLQGRNGEPGPKGAVGPAGKDGLPGHPGQRGEPGFQGKTGPPGPSGVVGPQGKSGEPGP 891

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G RG  G  G PG  G+PG  GK G KGD G PG  G +      G PG+ G  G  G 
Sbjct: 892  PGDRGHPGAPGVPGEHGLPGTAGKEGGKGDPGLPGTSGKN------GPPGMKGFRGSRGA 945

Query: 217  DGIPGKDGLP---------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             GI G  GL                G+ G PG+ G  G+ G  G  G  G  G  G PG
Sbjct: 946  PGIMGPPGLKGGSGPRGSPGAIGPTGERGPPGSAGAIGQPGRAGAIGGPGPMGEKGEPG 1004



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 86/187 (45%), Gaps = 30/187 (16%)

Query: 112  PGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG QG   P G  G +G +G+ G  G  G++G PG  G PG  G+PG  GK G KGD G 
Sbjct: 865  PGFQGKTGPPGPSGVVGPQGKSGEPGPPGDRGHPGAPGVPGEHGLPGTAGKEGGKGDPGL 924

Query: 169  P------GPQGIPGDEGKRGPKGDMGYPG------------RIGLDGRDGLPGEPGLDGI 210
            P      GP G+ G  G RG  G MG PG             IG  G  G PG  G  G 
Sbjct: 925  PGTSGKNGPPGMKGFRGSRGAPGIMGPPGLKGGSGPRGSPGAIGPTGERGPPGSAGAIGQ 984

Query: 211  PGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEK------GMTGPRGNRGKSGINGVPGT 261
            PGR G  G P   G+ G PG+ G  G  G +G++      G  GP G  G+ G  G  G 
Sbjct: 985  PGRAGAIGGPGPMGEKGEPGEKGPIGPAGQDGDQGPVGMIGAMGPAGPAGEDGDKGEQGK 1044

Query: 262  PAICAYK 268
            P     K
Sbjct: 1045 PGQKGSK 1051



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 98/223 (43%), Gaps = 45/223 (20%)

Query: 83   NPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAK--------------- 127
             P  +  +   I L  M G      E    GL GP GQ+G  G++               
Sbjct: 1097 GPRGFKGSTGPIGLQGMPGLPGEKGESGHVGLMGPPGQQGPSGSQGPIGGQGPPGRAGMV 1156

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG------PQGIPGDEGKR 181
            G+ GV GE+GE G  G  GP G  G PG +G++G KGD G PG       +G PG++G +
Sbjct: 1157 GQPGVVGEKGEDGEAGDPGPVGVSGKPGAKGEQGEKGDTGPPGMSGPPGARGTPGEDGAK 1216

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------------------- 222
            G  G +G  G +G   + G PG  G+DG+PG  G  G PGK                   
Sbjct: 1217 GNAGPIGLTGDLG---QQGEPGPNGVDGLPGSKGDTGDPGKLGPPGAPGEPGPSGPPGRR 1273

Query: 223  --DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
               G PGK+G  G  G  G  G+ GP G  G  G  G PG P 
Sbjct: 1274 GHMGKPGKEGKAGLKGAKGAPGLEGPIGKTGPVGAQGHPGKPG 1316



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 96/221 (43%), Gaps = 54/221 (24%)

Query: 108  EYCPPGLQGPIGQKGE------IGAKGEMGVKGERGEKGAPGVVGPPG------------ 149
            E+  PG  G  G KG+       G  G  G+KG RG +GAPG++GPPG            
Sbjct: 906  EHGLPGTAGKEGGKGDPGLPGTSGKNGPPGMKGFRGSRGAPGIMGPPGLKGGSGPRGSPG 965

Query: 150  ---------PQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDG 197
                     P G  G  G+ G  G +G PGP   +G PG++G  GP G  G  G +G+ G
Sbjct: 966  AIGPTGERGPPGSAGAIGQPGRAGAIGGPGPMGEKGEPGEKGPIGPAGQDGDQGPVGMIG 1025

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPG---------------------KDGLPGKDGIPGTNG 236
              G  G  G DG  G  G  G  G                     + GLPG DG+PG  G
Sbjct: 1026 AMGPAGPAGEDGDKGEQGKPGQKGSKGDKGEGGPPGPTGPQGPIGQPGLPGLDGLPGPRG 1085

Query: 237  TN---GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
                 G KG  GPRG +G +G  G+ G P +   K ES  +
Sbjct: 1086 QQGMYGPKGDEGPRGFKGSTGPIGLQGMPGLPGEKGESGHV 1126



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 80/184 (43%), Gaps = 27/184 (14%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQG---IP 154
            GF   T    P G+ GP G+ GE G    +G  G  G  GE G PG  G  G +G   +P
Sbjct: 866  GFQGKTGPPGPSGVVGPQGKSGEPGPPGDRGHPGAPGVPGEHGLPGTAGKEGGKGDPGLP 925

Query: 155  GDEGKRGPKGDMGYPGPQGIP---------------------GDEGKRGPKGDMGYPGRI 193
            G  GK GP G  G+ G +G P                     G  G+RGP G  G  G+ 
Sbjct: 926  GTSGKNGPPGMKGFRGSRGAPGIMGPPGLKGGSGPRGSPGAIGPTGERGPPGSAGAIGQP 985

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G  G  G PG  G  G PG  G  G  G+DG  G  G+ G  G  G  G  G +G +GK 
Sbjct: 986  GRAGAIGGPGPMGEKGEPGEKGPIGPAGQDGDQGPVGMIGAMGPAGPAGEDGDKGEQGKP 1045

Query: 254  GING 257
            G  G
Sbjct: 1046 GQKG 1049



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 84/177 (47%), Gaps = 30/177 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G  G  G +G  G KG+ G +G  G  GP G QG+PG  G++G  G +G  GP
Sbjct: 1072 PGLPGLDGLPGPRGQQGMYGPKGDEGPRGFKGSTGPIGLQGMPGLPGEKGESGHVGLMGP 1131

Query: 172  QGIPGDEGKRGP------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
               PG +G  G              G +G PG +G  G DG  G+PG  G+ G+ G  G 
Sbjct: 1132 ---PGQQGPSGSQGPIGGQGPPGRAGMVGQPGVVGEKGEDGEAGDPGPVGVSGKPGAKGE 1188

Query: 220  PGKD---------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G+                G PG+DG  G  G  G  G  G +G  G +G++G+PG+
Sbjct: 1189 QGEKGDTGPPGMSGPPGARGTPGEDGAKGNAGPIGLTGDLGQQGEPGPNGVDGLPGS 1245



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 80/174 (45%), Gaps = 45/174 (25%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEK---------------------GAPGVVGPPGPQ 151
            G  GP G  GE G KGE G  G++G K                     G PG+ G PGP+
Sbjct: 1025 GAMGPAGPAGEDGDKGEQGKPGQKGSKGDKGEGGPPGPTGPQGPIGQPGLPGLDGLPGPR 1084

Query: 152  GI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDG----- 197
            G        GDEG RG KG  G  G QG+PG  G++G  G    MG PG+ G  G     
Sbjct: 1085 GQQGMYGPKGDEGPRGFKGSTGPIGLQGMPGLPGEKGESGHVGLMGPPGQQGPSGSQGPI 1144

Query: 198  -------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                   R G+ G+PG+ G  G +G  G PG  G+ GK   PG  G  GEKG T
Sbjct: 1145 GGQGPPGRAGMVGQPGVVGEKGEDGEAGDPGPVGVSGK---PGAKGEQGEKGDT 1195



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 80/181 (44%), Gaps = 30/181 (16%)

Query: 93   RIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER---------------G 137
            R  +V   G      E    G  GP+G  G+ GAKGE G KG+                G
Sbjct: 1152 RAGMVGQPGVVGEKGEDGEAGDPGPVGVSGKPGAKGEQGEKGDTGPPGMSGPPGARGTPG 1211

Query: 138  EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---------------RG 182
            E GA G  GP G  G  G +G+ GP G  G PG +G  GD GK                G
Sbjct: 1212 EDGAKGNAGPIGLTGDLGQQGEPGPNGVDGLPGSKGDTGDPGKLGPPGAPGEPGPSGPPG 1271

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             +G MG PG+ G  G  G  G PGL+G  G+ G  G  G  G PG  G+ G  G  GE+G
Sbjct: 1272 RRGHMGKPGKEGKAGLKGAKGAPGLEGPIGKTGPVGAQGHPGKPGPQGLRGIPGPAGEQG 1331

Query: 243  M 243
            +
Sbjct: 1332 L 1332



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 15/114 (13%)

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIP------GRNGMDGI 219
           QGI G +G +G KG++G PG +G  G+       G PG  GL G+P      G+ GM G+
Sbjct: 577 QGIRGIDGAQGSKGNIGPPGEVGAPGQQGNPGIIGFPGPQGLVGLPGEKGPQGKKGMRGL 636

Query: 220 PGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           PG D   G PG++G PG  G  G  G+ GP G  G+ G+ G  G   +   K E
Sbjct: 637 PGNDGPPGHPGREGTPGEKGLPGPPGVQGPVGYPGQRGVKGADGLRGLKGSKGE 690


>gi|256090420|ref|XP_002581189.1| hypothetical protein [Schistosoma mansoni]
          Length = 713

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 80/183 (43%), Positives = 96/183 (52%), Gaps = 39/183 (21%)

Query: 111 PPGLQG------PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           PPGL G      P G KGE G  G+ G+ G +G+KG  G  GP G QG+PG+EG RGP G
Sbjct: 286 PPGLDGSRGEPGPSGMKGEDGRPGDSGLIGLKGDKGELGPPGPKGDQGLPGEEGPRGPHG 345

Query: 165 DMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------- 211
           D+G  G  G+PG     G+ GP+G  G PG  G  GR G  GEPGL G+P          
Sbjct: 346 DIGDQGDPGLPGVRGPVGQPGPQGPRGKPGNQGPRGRKGELGEPGLPGLPGPAGPIGTSG 405

Query: 212 -----------------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                            GR+G  G+PG DGLP   G PG  G  G KG TGP G++G +G
Sbjct: 406 PEGMAGPRGPTGVAGQRGRSGPSGVPGTDGLP---GFPGPKGDVGPKGDTGPNGSKGDTG 462

Query: 255 ING 257
           I G
Sbjct: 463 IQG 465



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 98/192 (51%), Gaps = 21/192 (10%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ--- 151
            + G      E  PPG +G  G  GE G +G  G  G++G+ G PGV GP   PGPQ   
Sbjct: 312 GLIGLKGDKGELGPPGPKGDQGLPGEEGPRGPHGDIGDQGDPGLPGVRGPVGQPGPQGPR 371

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIP---------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G PG++G RG KG++G PG  G+P         G EG  GP+G  G  G+ G  G  G+P
Sbjct: 372 GKPGNQGPRGRKGELGEPGLPGLPGPAGPIGTSGPEGMAGPRGPTGVAGQRGRSGPSGVP 431

Query: 203 GEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN--- 256
           G  GL G PG     G  G  G +G  G  GI G  G  GE+G +GP G +G+SG     
Sbjct: 432 GTDGLPGFPGPKGDVGPKGDTGPNGSKGDTGIQGPRGYKGERGRSGPEGAKGESGKPGPV 491

Query: 257 GVPGTPAICAYK 268
           GVPG P     K
Sbjct: 492 GVPGDPGPKGVK 503



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 95/179 (53%), Gaps = 18/179 (10%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           QG  G  G  G++GE G  G +GE G PG  G  G +G  G+ G  GPKGD      QG+
Sbjct: 281 QGSSGPPGLDGSRGEPGPSGMKGEDGRPGDSGLIGLKGDKGELGPPGPKGD------QGL 334

Query: 175 PGDEGKRGPKGDM---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PG+EG RGP GD+   G PG  G+ G  G PG  G  G PG  G  G  G+ G PG  G+
Sbjct: 335 PGEEGPRGPHGDIGDQGDPGLPGVRGPVGQPGPQGPRGKPGNQGPRGRKGELGEPGLPGL 394

Query: 232 PGTN---GTNGEKGMTGPR------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
           PG     GT+G +GM GPR      G RG+SG +GVPGT  +  +      + P  +T 
Sbjct: 395 PGPAGPIGTSGPEGMAGPRGPTGVAGQRGRSGPSGVPGTDGLPGFPGPKGDVGPKGDTG 453



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 68/125 (54%), Gaps = 6/125 (4%)

Query: 112 PGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GPIG    +G  G +G  GV G+RG  G  GV G  G  G PG +G  GPKGD   
Sbjct: 395 PGPAGPIGTSGPEGMAGPRGPTGVAGQRGRSGPSGVPGTDGLPGFPGPKGDVGPKGDT-- 452

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            GP G  GD G +GP+G  G  GR G +G  G  G+PG  G+PG  G  G+ G  G+ G 
Sbjct: 453 -GPNGSKGDTGIQGPRGYKGERGRSGPEGAKGESGKPGPVGVPGDPGPKGVKGDVGISGP 511

Query: 229 DGIPG 233
            G PG
Sbjct: 512 VGSPG 516



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 47/82 (57%), Gaps = 3/82 (3%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIP 154
            + GF     +  P G  GP G KG+ G +G  G KGERG    +GA G  G PGP G+P
Sbjct: 435 GLPGFPGPKGDVGPKGDTGPNGSKGDTGIQGPRGYKGERGRSGPEGAKGESGKPGPVGVP 494

Query: 155 GDEGKRGPKGDMGYPGPQGIPG 176
           GD G +G KGD+G  GP G PG
Sbjct: 495 GDPGPKGVKGDVGISGPVGSPG 516



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G         P G+ G  G  G  G KG++G KG+ G  G+ G  G  GP+G  G+ G+ 
Sbjct: 417 GVAGQRGRSGPSGVPGTDGLPGFPGPKGDVGPKGDTGPNGSKGDTGIQGPRGYKGERGRS 476

Query: 161 GP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           GP   KG+ G PGP G+PGD G +G KGD+G  G +G  G
Sbjct: 477 GPEGAKGESGKPGPVGVPGDPGPKGVKGDVGISGPVGSPG 516


>gi|354484215|ref|XP_003504285.1| PREDICTED: collagen alpha-1(VII) chain [Cricetulus griseus]
          Length = 2941

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 87/146 (59%), Gaps = 6/146 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
            PG +G  G+ G+ G+ G +GV+G  G KG  G  G PG  G PG +G    RG KGD+G+
Sbjct: 2547 PGDKGSKGEPGDKGSAGSIGVRGLPGPKGETGATGIPGEPGAPGKDGAPGFRGDKGDIGF 2606

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             GP+G+   +G+RG KG  G  G  G  G  G PG PGL G  G  G  G+PG+ G PGK
Sbjct: 2607 MGPRGL---KGERGMKGACGLDGEKGAKGEAGFPGRPGLAGRKGDAGEPGVPGQSGSPGK 2663

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSG 254
            +G+ G  G  G  G +GP+G++G+ G
Sbjct: 2664 EGLIGPKGDRGFDGQSGPKGDQGEKG 2689



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 97/184 (52%), Gaps = 10/184 (5%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD 156
             ++G      +  P GL GP G +G+ G KG+ G  G +G+KG   V+ GPPG +G  GD
Sbjct: 2466 GVRGEDGHPGQEGPRGLMGPPGSRGDRGEKGDTGPAGLKGDKGDSAVIEGPPGIRGAKGD 2525

Query: 157  EGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G+RGP+G  G  GP+G    PGD+G +G  GD G  G IG+ G  G  GE G  GIPG 
Sbjct: 2526 MGERGPRGIDGDKGPRGDNGNPGDKGSKGEPGDKGSAGSIGVRGLPGPKGETGATGIPGE 2585

Query: 214  NGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGTPAICAY 267
             G    DG PG  G  G  G  G  G  GE+GM G     G +G  G  G PG P +   
Sbjct: 2586 PGAPGKDGAPGFRGDKGDIGFMGPRGLKGERGMKGACGLDGEKGAKGEAGFPGRPGLAGR 2645

Query: 268  KRES 271
            K ++
Sbjct: 2646 KGDA 2649



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 93/168 (55%), Gaps = 24/168 (14%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG++G  G  GE G +G  G KG RG+ G PG  G    +G PGD+G  G  G  G PG
Sbjct: 2516 PPGIRGAKGDMGERGPRGIDGDKGPRGDNGNPGDKGS---KGEPGDKGSAGSIGVRGLPG 2572

Query: 171  PQ------GIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            P+      GIPG+ G          RG KGD+G+ G  GL G  G+ G  GLDG  G  G
Sbjct: 2573 PKGETGATGIPGEPGAPGKDGAPGFRGDKGDIGFMGPRGLKGERGMKGACGLDGEKGAKG 2632

Query: 216  MDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G PG+ GL G+       G+PG +G+ G++G+ GP+G+RG  G +G
Sbjct: 2633 EAGFPGRPGLAGRKGDAGEPGVPGQSGSPGKEGLIGPKGDRGFDGQSG 2680



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 96/230 (41%), Gaps = 72/230 (31%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGE------------------------------- 129
            GF   T      G  GP+G++G  G  G                                
Sbjct: 2392 GFPGQTGPRGETGQPGPVGERGLAGPPGREGAPGPLGPPGPPGSVGAPGASGLKGDKGDP 2451

Query: 130  -MGVKGERGEKGAPGV---------------VGPP------------GPQGIPGDEGK-- 159
              G+ G RGE+G PGV               +GPP            GP G+ GD+G   
Sbjct: 2452 GTGLPGPRGERGEPGVRGEDGHPGQEGPRGLMGPPGSRGDRGEKGDTGPAGLKGDKGDSA 2511

Query: 160  --------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                    RG KGDMG  GP+GI GD+G RG  G+ G  G  G  G  G  G  G+ G+P
Sbjct: 2512 VIEGPPGIRGAKGDMGERGPRGIDGDKGPRGDNGNPGDKGSKGEPGDKGSAGSIGVRGLP 2571

Query: 212  ---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
               G  G  GIPG+ G PGKDG PG  G  G+ G  GPRG +G+ G+ G 
Sbjct: 2572 GPKGETGATGIPGEPGAPGKDGAPGFRGDKGDIGFMGPRGLKGERGMKGA 2621



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 83/178 (46%), Gaps = 44/178 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG-----------------------APGVV--- 145
            PG  G  G+ G  G +GE G KG+RGE+G                        PG+    
Sbjct: 2039 PGRAGSAGEAGRPGERGERGEKGDRGEQGRDGLPGLPGPPGPPGPKVAIDEQGPGLSREQ 2098

Query: 146  GPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            GPPG    +G PG +G  GPKGD G P            G KGD G PG+ G DG  GLP
Sbjct: 2099 GPPGLKGAKGEPGSDGDHGPKGDKGAP------------GIKGDQGEPGKRGHDGSPGLP 2146

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GE    G+ G  G  G+ G  G PG  G  G  G +G  G+ GP G +G SG+ G PG
Sbjct: 2147 GE---RGVAGPEGKPGLQGPRGTPGPAGGHGDPGPSGAPGLAGPAGPQGPSGLKGEPG 2201



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 90/200 (45%), Gaps = 44/200 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP-----KGDMG 167
            GL GP G+KGE G  GE G  GE G+KGAPG+ G  G  GI              KGD+G
Sbjct: 2324 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGLKGLKGEPGIGVQGPPGPTGPPGMKGDVG 2383

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------------------- 205
             PG  G+ G  G+ GP+G+ G PG +G  G  G PG                        
Sbjct: 2384 SPGAPGVVGFPGQTGPRGETGQPGPVGERGLAGPPGREGAPGPLGPPGPPGSVGAPGASG 2443

Query: 206  ----------GLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGN 249
                      GL G  G  G  G+ G+DG PG++      G PG+ G  GEKG TGP G 
Sbjct: 2444 LKGDKGDPGTGLPGPRGERGEPGVRGEDGHPGQEGPRGLMGPPGSRGDRGEKGDTGPAGL 2503

Query: 250  RGKSGINGV-PGTPAICAYK 268
            +G  G + V  G P I   K
Sbjct: 2504 KGDKGDSAVIEGPPGIRGAK 2523



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/112 (52%), Positives = 63/112 (56%), Gaps = 11/112 (9%)

Query: 106  TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGP 162
            T E   PGL G   + GE G  GE G KGE+G+ GAPG  GP GP+G    PGD G RGP
Sbjct: 1826 TGEDGKPGLNG---KNGEPGDPGEDGRKGEKGDSGAPGREGPDGPKGERGAPGDPGLRGP 1882

Query: 163  KGDMGYPGP--QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
             G  G  GP  QG PG  G  GPKGD    G  G  G  GLPGE GL G PG
Sbjct: 1883 PGLPGQVGPPGQGFPGVPGSMGPKGDR---GETGSKGEQGLPGERGLRGEPG 1931



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 93/251 (37%), Gaps = 93/251 (37%)

Query: 106  TKEYCPPGLQ------------GPIGQKGEIGAKGEMGVKGERGEKGAP------GVVGP 147
            ++E  PPGL+            GP G KG  G KG+ G  G+RG  G+P      GV GP
Sbjct: 2095 SREQGPPGLKGAKGEPGSDGDHGPKGDKGAPGIKGDQGEPGKRGHDGSPGLPGERGVAGP 2154

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG------------- 194
             G  G+ G  G  GP G  G PGP G PG  G  GP+G  G  G  G             
Sbjct: 2155 EGKPGLQGPRGTPGPAGGHGDPGPSGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPT 2214

Query: 195  ----------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKD--------------- 223
                              G  GLPG+ G  G PG  G DG  GKD               
Sbjct: 2215 GAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGTSGKDGERGGPGVPGLPGLP 2274

Query: 224  ------GLPGKDGIPGT-------------------------NGTNGEKGMTGPRGNRGK 252
                  G PG  G PG                           G  G++G+ GPRG +G+
Sbjct: 2275 GPVGPKGEPGPVGAPGQVMVGPPGAKGEKGAPGDLAGDLLGEPGAKGDRGLPGPRGEKGE 2334

Query: 253  SGINGVPGTPA 263
            +G  G PG P 
Sbjct: 2335 AGRAGEPGDPG 2345



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 85/188 (45%), Gaps = 42/188 (22%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPPGPQ-- 151
            PGL G +G+ G+ G  G  G  G+ GE                  KG PG VG PG    
Sbjct: 2235 PGLPGQVGETGKPGPPGRDGTSGKDGERGGPGVPGLPGLPGPVGPKGEPGPVGAPGQVMV 2294

Query: 152  GIPGDEGKRGPKGDM--------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            G PG +G++G  GD+        G  G +G+PG  G++G  G  G PG  G DG+ G PG
Sbjct: 2295 GPPGAKGEKGAPGDLAGDLLGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPG 2354

Query: 204  EPGLDGIPG-----------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
              GL G PG             GM G  G  G PG  G PG  G  GE G  GP G RG 
Sbjct: 2355 LKGLKGEPGIGVQGPPGPTGPPGMKGDVGSPGAPGVVGFPGQTGPRGETGQPGPVGERG- 2413

Query: 253  SGINGVPG 260
              + G PG
Sbjct: 2414 --LAGPPG 2419



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 90/184 (48%), Gaps = 24/184 (13%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGE---------IGAKGEMGVKGERGEKGAPG--VVG 146
             + G    T +  PPG  G  G+ GE          G  G +G KGE G  GAPG  +VG
Sbjct: 2236 GLPGQVGETGKPGPPGRDGTSGKDGERGGPGVPGLPGLPGPVGPKGEPGPVGAPGQVMVG 2295

Query: 147  PPGP---QGIPGD-----EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            PPG    +G PGD      G+ G KGD G PGP+G  G+ G+ G  GD G  G+ G  G 
Sbjct: 2296 PPGAKGEKGAPGDLAGDLLGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGL 2355

Query: 199  DGLPGEPGL-----DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
             GL GEPG+      G  G  GM G  G  G PG  G PG  G  GE G  GP G RG +
Sbjct: 2356 KGLKGEPGIGVQGPPGPTGPPGMKGDVGSPGAPGVVGFPGQTGPRGETGQPGPVGERGLA 2415

Query: 254  GING 257
            G  G
Sbjct: 2416 GPPG 2419



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 94/226 (41%), Gaps = 75/226 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---------------------------------RGE 138
            PG+ GP G +G+ G  GE G KGE                                 RGE
Sbjct: 1471 PGITGPKGDRGQTGTPGEPGEKGERGPPGPVGPQGLPGVAGHPGVEGPEGPPGPAGRRGE 1530

Query: 139  KGAPG-----VVGP--------------PGPQGIPGDEGKRGPKGDM--GYPGPQGIPGD 177
            KG PG      VGP              PGP+G  G +G++GP G    G PGP+G PGD
Sbjct: 1531 KGEPGRPGDPAVGPGGAGAKGEKGDAGLPGPRGAAGIKGEQGPPGLALPGDPGPKGDPGD 1590

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGE---------------PGLDGIPGRNGMDGIPGK 222
                  +G +G  GR G  G  G PGE                G DG  G  G++G PG 
Sbjct: 1591 ------RGPIGLTGRAGPTGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGVEGNPGD 1644

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             GLPGK G  G  G  G +G  G +G++G  G +G  G+P     K
Sbjct: 1645 PGLPGKAGERGLRGAPGVRGPAGEKGDQGDPGEDGRNGSPGPSGPK 1690



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 93/199 (46%), Gaps = 50/199 (25%)

Query: 114  LQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIP---------- 154
            ++GP G KG+ G  G  G  G           G  GA G  G PG  G+P          
Sbjct: 1756 VRGPAGDKGDRGPPGLDGRNGVDGKPGAPGPPGPHGASGKAGDPGRDGLPGLRGEHGPAG 1815

Query: 155  -----------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---GRDG 200
                       G++GK G  G  G P   G PG++G++G KGD G PGR G D   G  G
Sbjct: 1816 PPGPPGVPGKTGEDGKPGLNGKNGEP---GDPGEDGRKGEKGDSGAPGREGPDGPKGERG 1872

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG+PGL G PG  G  G PG+ G P   G+PG+ G  G++G TG +G +G  G  G+ G
Sbjct: 1873 APGDPGLRGPPGLPGQVGPPGQ-GFP---GVPGSMGPKGDRGETGSKGEQGLPGERGLRG 1928

Query: 261  TPAICAYKRESCSLLPNSE 279
             P            LPN+E
Sbjct: 1929 EPGS----------LPNAE 1937



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 72/176 (40%), Gaps = 70/176 (39%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRD--------- 199
            G  G  G KG  G+PGP+G PG+ G RGPKG+ G PG +      GL G+          
Sbjct: 1315 GAPGSPGIKGSPGWPGPRGEPGERGPRGPKGEPGEPGEVIGGEGPGLPGKKGDPGPSGPP 1374

Query: 200  ---------------GLPG--------------------------EPGLDGIPGRNGMDG 218
                           G+PG                          EPGL G+PG  G  G
Sbjct: 1375 GPRGPLGDPGPRGSPGIPGTSVKGDKGDRGERGPPGPGIGGTGQGEPGLPGLPGSPGPQG 1434

Query: 219  IPGKD--------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G+               GLPG+ G PG  G  G  G+TGP+G+RG++G  G PG
Sbjct: 1435 PAGRAGEKGEKGDCEDGAPGLPGQPGAPGEPGLRGTPGITGPKGDRGQTGTPGEPG 1490



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 50/92 (54%), Gaps = 6/92 (6%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G+ GE+G KG  G        G PG  G++G  G+ G PG  
Sbjct: 2605 GFMGPRGLKGERGMKGACGLDGEKGAKGEAGF------PGRPGLAGRKGDAGEPGVPGQS 2658

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            G PG EG  GPKGD G+ G+ G  G  G  GE
Sbjct: 2659 GSPGKEGLIGPKGDRGFDGQSGPKGDQGEKGE 2690



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 83/195 (42%), Gaps = 57/195 (29%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QGP G+ GE G KG+     E G  G PG  G PG  G+ G  G  GPKGD G  G 
Sbjct: 1430 PGPQGPAGRAGEKGEKGDC----EDGAPGLPGQPGAPGEPGLRGTPGITGPKGDRGQTGT 1485

Query: 172  QGIPGDEGKRGP------------------------------KGDMGYPGRIGLDGRDGL 201
             G PG++G+RGP                              +G+ G PGR         
Sbjct: 1486 PGEPGEKGERGPPGPVGPQGLPGVAGHPGVEGPEGPPGPAGRRGEKGEPGR--------- 1536

Query: 202  PGEPGLD-------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG+P +              G+PG  G  GI G+ G PG   +PG  G  G+ G  GP G
Sbjct: 1537 PGDPAVGPGGAGAKGEKGDAGLPGPRGAAGIKGEQGPPGLA-LPGDPGPKGDPGDRGPIG 1595

Query: 249  NRGKSGINGVPGTPA 263
              G++G  G  G P 
Sbjct: 1596 LTGRAGPTGDSGPPG 1610



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 95/251 (37%), Gaps = 95/251 (37%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------------ 147
            PG  GP G +GE G+KGE G+ GERG +G PG + P                        
Sbjct: 1900 PGSMGPKGDRGETGSKGEQGLPGERGLRGEPGSL-PNAERLLETAGIKVSALRDIVETWG 1958

Query: 148  -------------PGPQGIPGDEGKRGPKGDMGYPGPQG--------------------- 173
                         PGP+G PG+ G  G +G +G+PG +G                     
Sbjct: 1959 ESSGSFLPVPERRPGPKGDPGERGPPGKEGSIGFPGERGLKGDRGDPGPQGPPGLALGER 2018

Query: 174  ----------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------- 210
                            IPG  G+ G  G+ G PG  G  G  G  GE G DG+       
Sbjct: 2019 GPPGPPGLAGEPGKPGIPGLPGRAGSAGEAGRPGERGERGEKGDRGEQGRDGLPGLPGPP 2078

Query: 211  -------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                         PG +   G PG  G  G+ G  G +G  G+KG  G +G++G+ G  G
Sbjct: 2079 GPPGPKVAIDEQGPGLSREQGPPGLKGAKGEPGSDGDHGPKGDKGAPGIKGDQGEPGKRG 2138

Query: 258  VPGTPAICAYK 268
              G+P +   +
Sbjct: 2139 HDGSPGLPGER 2149



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 88/275 (32%), Gaps = 114/275 (41%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE--------------------- 138
            QGF        P G +G  G KGE G  GE G++GE G                      
Sbjct: 1894 QGFPGVPGSMGPKGDRGETGSKGEQGLPGERGLRGEPGSLPNAERLLETAGIKVSALRDI 1953

Query: 139  ---------------------KGAPGVVGPPGPQGIPGDEGKRGPKGD------------ 165
                                 KG PG  GPPG +G  G  G+RG KGD            
Sbjct: 1954 VETWGESSGSFLPVPERRPGPKGDPGERGPPGKEGSIGFPGERGLKGDRGDPGPQGPPGL 2013

Query: 166  ----------------------------MGYPGPQGIPGDEGKRGPKGDMGYPGR----- 192
                                         G  G  G PG+ G+RG KGD G  GR     
Sbjct: 2014 ALGERGPPGPPGLAGEPGKPGIPGLPGRAGSAGEAGRPGERGERGEKGDRGEQGRDGLPG 2073

Query: 193  ---------------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                                        GL G  G PG  G  G  G  G  GI G  G 
Sbjct: 2074 LPGPPGPPGPKVAIDEQGPGLSREQGPPGLKGAKGEPGSDGDHGPKGDKGAPGIKGDQGE 2133

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGK G  G+ G  GE+G+ GP G  G  G  G PG
Sbjct: 2134 PGKRGHDGSPGLPGERGVAGPEGKPGLQGPRGTPG 2168



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 91/234 (38%), Gaps = 73/234 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMG--------------------------VKGERGEKGAPGVV 145
            PGL GP G +G  G KGE G                          + G +G  G PG V
Sbjct: 2182 PGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLPGPPGPSGLVGPQGSPGLPGQV 2241

Query: 146  GPPGPQGIPGDEGKRGPKGDM------------------GYPGPQGIPGD--EGKRGPKG 185
            G  G  G PG +G  G  G+                   G PGP G PG    G  G KG
Sbjct: 2242 GETGKPGPPGRDGTSGKDGERGGPGVPGLPGLPGPVGPKGEPGPVGAPGQVMVGPPGAKG 2301

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            + G PG +  D    L GEPG     G  G+ G  G+ G  G+ G PG  G +G+KG  G
Sbjct: 2302 EKGAPGDLAGD----LLGEPGAK---GDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPG 2354

Query: 246  PRGNRGKSGIN-----------------GVPGTPAICAYKRESCSLLPNSETSQ 282
             +G +G+ GI                  G PG P +  +  ++    P  ET Q
Sbjct: 2355 LKGLKGEPGIGVQGPPGPTGPPGMKGDVGSPGAPGVVGFPGQTG---PRGETGQ 2405



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 94/255 (36%), Gaps = 112/255 (43%)

Query: 122  GEIGAKGEM---------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            GE+G KG           G  GERG +GAPGV GP G +G  GD G+ G  G  G  GP 
Sbjct: 1631 GEVGEKGVEGNPGDPGLPGKAGERGLRGAPGVRGPAGEKGDQGDPGEDGRNGSPGPSGPK 1690

Query: 172  ------------------------QGIPGDE---------------GKR----------- 181
                                    +G PG E               G+R           
Sbjct: 1691 GDRGEPGPPGPPGRLVDAGIGSRDKGEPGQEGPRGPKGDPGPPGASGERGIEGLRGPPGP 1750

Query: 182  -------GPKGDMGYPGRIGLDGRDGL------------------PGEPGLDGIPG---- 212
                   GP GD G  G  GLDGR+G+                   G+PG DG+PG    
Sbjct: 1751 QGDPGVRGPAGDKGDRGPPGLDGRNGVDGKPGAPGPPGPHGASGKAGDPGRDGLPGLRGE 1810

Query: 213  --------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---------GPRGN 249
                          + G DG PG +G  G+ G PG +G  GEKG +         GP+G 
Sbjct: 1811 HGPAGPPGPPGVPGKTGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGPDGPKGE 1870

Query: 250  RGKSGINGVPGTPAI 264
            RG  G  G+ G P +
Sbjct: 1871 RGAPGDPGLRGPPGL 1885



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 96/230 (41%), Gaps = 85/230 (36%)

Query: 116  GPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKG----- 164
            G +G+KG  G  G+ G+    GERG +GAPGV GP G    QG PG++G+ G  G     
Sbjct: 1631 GEVGEKGVEGNPGDPGLPGKAGERGLRGAPGVRGPAGEKGDQGDPGEDGRNGSPGPSGPK 1690

Query: 165  -----------------------DMGYPGPQ---------------GIPGDEG------- 179
                                   D G PG +               G  G EG       
Sbjct: 1691 GDRGEPGPPGPPGRLVDAGIGSRDKGEPGQEGPRGPKGDPGPPGASGERGIEGLRGPPGP 1750

Query: 180  -----KRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDGLP----- 226
                  RGP GD G  G  GLDGR+G+   PG PG  G  G +G  G PG+DGLP     
Sbjct: 1751 QGDPGVRGPAGDKGDRGPPGLDGRNGVDGKPGAPGPPGPHGASGKAGDPGRDGLPGLRGE 1810

Query: 227  ----------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                            G+DG PG NG NGE G  G  G +G+ G +G PG
Sbjct: 1811 HGPAGPPGPPGVPGKTGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPG 1860



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 62/138 (44%), Gaps = 25/138 (18%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L   +G      E  PPGL  P    G+ G KG+    G+RG  G  G  GP G  G PG
Sbjct: 1558 LPGPRGAAGIKGEQGPPGLALP----GDPGPKGD---PGDRGPIGLTGRAGPTGDSGPPG 1610

Query: 156  D------------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            +                  +G+ G KG  G PG  G+PG  G+RG +G  G  G  G  G
Sbjct: 1611 EKGDPGRPGPPGPVGPRGRDGEVGEKGVEGNPGDPGLPGKAGERGLRGAPGVRGPAGEKG 1670

Query: 198  RDGLPGEPGLDGIPGRNG 215
              G PGE G +G PG +G
Sbjct: 1671 DQGDPGEDGRNGSPGPSG 1688


>gi|355701230|gb|AES01614.1| macrophage receptor with collagenous structure [Mustela putorius
           furo]
          Length = 477

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 89/163 (54%), Gaps = 21/163 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL GP G+ G  G KG++G+   KG+ G KG  GV+GPPG QG  GD GK G  G  G+P
Sbjct: 195 GLVGPKGEPGAKGDKGDLGLPGSKGDTGMKGDAGVMGPPGAQGTKGDSGKPGTPGAAGFP 254

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------------RNGMD 217
              GI GD+G+ G KG    PG  G+ G  G  GEPG  G PG             NGM 
Sbjct: 255 ---GIKGDQGQPGVKGP---PGSPGVAGSPGPKGEPGTAGSPGLAGPPGTPGSPGANGMK 308

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  GL G+ G  G +G  G +GM G +GN G+ G+ G PG
Sbjct: 309 GSKGDPGLQGQKGTKGESGVPGPEGMKGQKGNPGQGGLTGAPG 351



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 89/179 (49%), Gaps = 27/179 (15%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP- 169
           PPG QG  G  G+ G  G  G  G +G++G PGV GPPG  G+ G  G +G  G  G P 
Sbjct: 232 PPGAQGTKGDSGKPGTPGAAGFPGIKGDQGQPGVKGPPGSPGVAGSPGPKGEPGTAGSPG 291

Query: 170 -----------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                            G +G PG +G++G KG+ G PG  G+ G+ G PG+ GL G PG
Sbjct: 292 LAGPPGTPGSPGANGMKGSKGDPGLQGQKGTKGESGVPGPEGMKGQKGNPGQGGLTGAPG 351

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT----GPRGNRGKSGI--NGVPGTPAIC 265
             G  G PG  G  G  G  G  G  GE   T    G R NRG++ I  NGV GT  IC
Sbjct: 352 LKGQKGEPGVKGASGAQGTQGEKGQKGEPLQTVRIIGSR-NRGRAEIFYNGVWGT--IC 407



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 72/131 (54%), Gaps = 6/131 (4%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +GE G  G  G PG QG PG++G++G KGD G  GP+G P   G +G KGD+G PG    
Sbjct: 164 KGEAGLQGPNGAPGKQGAPGEQGEKGSKGDGGLVGPKGEP---GAKGDKGDLGLPGS--- 217

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  G+ G+ G+ G PG  G  G  GK G PG  G PG  G  G+ G+ GP G+ G +G 
Sbjct: 218 KGDTGMKGDAGVMGPPGAQGTKGDSGKPGTPGAAGFPGIKGDQGQPGVKGPPGSPGVAGS 277

Query: 256 NGVPGTPAICA 266
            G  G P    
Sbjct: 278 PGPKGEPGTAG 288



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 24/115 (20%)

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           I G+ G +GP G    PG QG PG++G++G KGD G    +G  G  G  G+ G  G+PG
Sbjct: 163 IKGEAGLQGPNG---APGKQGAPGEQGEKGSKGDGGL---VGPKGEPGAKGDKGDLGLPG 216

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             G  G+                   G+ G+ GP G +G  G +G PGTP    +
Sbjct: 217 SKGDTGM------------------KGDAGVMGPPGAQGTKGDSGKPGTPGAAGF 253



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 39/81 (48%), Gaps = 3/81 (3%)

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  GL G +G PG+    G PG  G  G  G  GL G  G PG  G  G+ G+ G +G+ 
Sbjct: 165 GEAGLQGPNGAPGK---QGAPGEQGEKGSKGDGGLVGPKGEPGAKGDKGDLGLPGSKGDT 221

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  G  GV G P     K +S
Sbjct: 222 GMKGDAGVMGPPGAQGTKGDS 242



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 36/64 (56%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            +QG   +  E   PG +G  GQKG  G  G  G  G +G+KG PGV G  G QG  G++
Sbjct: 315 GLQGQKGTKGESGVPGPEGMKGQKGNPGQGGLTGAPGLKGQKGEPGVKGASGAQGTQGEK 374

Query: 158 GKRG 161
           G++G
Sbjct: 375 GQKG 378


>gi|444525520|gb|ELV14067.1| Collagen alpha-3(V) chain, partial [Tupaia chinensis]
          Length = 1127

 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 85/154 (55%), Gaps = 12/154 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP+G  GE G+ GE G  G  G+ G PG +GP GP G  G  G+ G KGD+G PG +
Sbjct: 582 GGQGPVGPAGEKGSPGERGPPGPTGKDGIPGPLGPLGPSGAAGPSGEEGDKGDVGAPGHK 641

Query: 173 GIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  GD+G  GP      +G +GYPG  G DG  G  G PGL G  G +G+ G  G  G P
Sbjct: 642 GSKGDKGDAGPPGPAGIRGLVGYPGPPGADGAQGRRGPPGLFGQKGDDGIRGFVGVIGPP 701

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G+PG  G  GE       G+ G  GI+G PG
Sbjct: 702 GLQGLPGPPGEKGEV------GDVGSMGIDGAPG 729



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 79/159 (49%), Gaps = 6/159 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  G  GE G  G  G  G  G+ G  G VGP G +G PG+ G  GP G  G PG
Sbjct: 553 PPGPVGANGSPGERGPVGPAGGIGLPGQSGGQGPVGPAGEKGSPGERGPPGPTGKDGIPG 612

Query: 171 PQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           P G  G  G  GP      KGD+G PG  G  G  G  G PG  GI G  G  G PG DG
Sbjct: 613 PLGPLGPSGAAGPSGEEGDKGDVGAPGHKGSKGDKGDAGPPGPAGIRGLVGYPGPPGADG 672

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ G PG  G  G+ G+ G  G  G  G+ G+PG P 
Sbjct: 673 AQGRRGPPGLFGQKGDDGIRGFVGVIGPPGLQGLPGPPG 711



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 88/206 (42%), Gaps = 42/206 (20%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           V   G   S  E  PPG  G  G  G +G  G  G  G  GE+G  G VG PG +G  GD
Sbjct: 587 VGPAGEKGSPGERGPPGPTGKDGIPGPLGPLGPSGAAGPSGEEGDKGDVGAPGHKGSKGD 646

Query: 157 EGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           +G  GP      +G +GYPGP G  G +G+RGP G  G  G  G+ G  G+ G PGL G+
Sbjct: 647 KGDAGPPGPAGIRGLVGYPGPPGADGAQGRRGPPGLFGQKGDDGIRGFVGVIGPPGLQGL 706

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGT------------------NGTNGEKGMT-------- 244
           PG  G  G  G  G  G DG PG                    G  GEKG          
Sbjct: 707 PGPPGEKGEVGDVGSMGIDGAPGEKGDPGDVGGPGPSGRMGPEGREGEKGAKGEPGPDGP 766

Query: 245 ----------GPRGNRGKSGINGVPG 260
                     GP G  G  G+ G+PG
Sbjct: 767 PGRTGPLGARGPPGRVGPEGLRGIPG 792



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 88/210 (41%), Gaps = 54/210 (25%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVK------------------GERGEKGAPGVVGPPGPQ 151
           G QG  G+KGE    G KG+ G+K                  G +G++G  G  GPPG  
Sbjct: 450 GFQGEKGEKGEDGFPGFKGDAGLKGDRGHPGPPGPRGEDGPEGPKGQEGQAGKEGPPGSA 509

Query: 152 GIPGDEGKRGP---------------------------KGDMGYPGP---QGIPGDEGKR 181
           G  G+ G  GP                           KGD G PGP    G PG+ G  
Sbjct: 510 GEKGELGPLGPLGKEGPPGPRGFPGPPGPLGDPGPAGLKGDKGPPGPVGANGSPGERGPV 569

Query: 182 GPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           GP G +G PG+ G  G  G  GE   PG  G PG  G DGIPG  G  G  G  G +G  
Sbjct: 570 GPAGGIGLPGQSGGQGPVGPAGEKGSPGERGPPGPTGKDGIPGPLGPLGPSGAAGPSGEE 629

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+KG  G  G++G  G  G  G P     +
Sbjct: 630 GDKGDVGAPGHKGSKGDKGDAGPPGPAGIR 659



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 86/209 (41%), Gaps = 60/209 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------------------P 147
           PG QG IG  GE G  G  G +GE+GEKG  G  G                        P
Sbjct: 431 PGPQGLIGAPGEKGTSGNRGFQGEKGEKGEDGFPGFKGDAGLKGDRGHPGPPGPRGEDGP 490

Query: 148 PGPQGIPGDEGKRGP------KGDMGYPGPQG------------------------IPGD 177
            GP+G  G  GK GP      KG++G  GP G                        + GD
Sbjct: 491 EGPKGQEGQAGKEGPPGSAGEKGELGPLGPLGKEGPPGPRGFPGPPGPLGDPGPAGLKGD 550

Query: 178 EGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGI 231
           +G  GP G  G PG    +G  G  GLPG+ G  G  G  G  G PG+ G P   GKDGI
Sbjct: 551 KGPPGPVGANGSPGERGPVGPAGGIGLPGQSGGQGPVGPAGEKGSPGERGPPGPTGKDGI 610

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G  G  G  GP G  G  G  G PG
Sbjct: 611 PGPLGPLGPSGAAGPSGEEGDKGDVGAPG 639



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 88/187 (47%), Gaps = 33/187 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G +G  G  G  G KG+ G +G  GV+GPPG QG+PG  G++G  GD+G  G 
Sbjct: 665 PGPPGADGAQGRRGPPGLFGQKGDDGIRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGI 724

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------------GLDGIPGRNGM 216
            G PG++G  G  G  G  GR+G +GR+G  G                 G  G PGR G 
Sbjct: 725 DGAPGEKGDPGDVGGPGPSGRMGPEGREGEKGAKGEPGPDGPPGRTGPLGARGPPGRVGP 784

Query: 217 DGIPGKDGLPGKDGIPG---------------TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           +G+    G+PG  G PG                 G  G KG  GP+G +G  G+ G+ G 
Sbjct: 785 EGL---RGIPGPVGEPGLLGSPGLMGPPGPLGPPGLPGLKGDAGPKGEKGHIGLIGLIGP 841

Query: 262 PAICAYK 268
           P     K
Sbjct: 842 PGEAGEK 848


>gi|345322237|ref|XP_001510641.2| PREDICTED: collagen alpha-1(IX) chain-like [Ornithorhynchus
           anatinus]
          Length = 921

 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/167 (46%), Positives = 92/167 (55%), Gaps = 12/167 (7%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG         PPG QG  G  G +GAKG+ G +G  GE G  G+ G PG QG  G  G+
Sbjct: 453 QGDFGDVGAQGPPGTQGLRGITGIVGAKGDKGARGLDGEPGPQGLPGAPGDQGQRGSPGE 512

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN----- 214
            GPKGD G  GP+GI    G  GPKG+ G PG   LDGRDG+PG PG  G PG+      
Sbjct: 513 TGPKGDRGIQGPRGI---TGLPGPKGENGLPG---LDGRDGIPGMPGAKGEPGKPGPPGD 566

Query: 215 -GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G+PG  G+PG  G+ G  G +G  G  G  GN GK G  G PG
Sbjct: 567 VGLQGLPGLPGIPGAKGVAGEKGNSGAPGTPGLIGNSGKPGEQGPPG 613



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 73/139 (52%), Gaps = 3/139 (2%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G+ G +G KGA G +G PG QG  G+EG +G  GD+G    QG PG +G RG  
Sbjct: 418 GRSGHPGLPGPKGHKGAKGEIGEPGRQGHKGEEGDQGDFGDVGA---QGPPGTQGLRGIT 474

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G +G  G  G  G DG PG  GL G PG  G  G PG+ G  G  GI G  G  G  G  
Sbjct: 475 GIVGAKGDKGARGLDGEPGPQGLPGAPGDQGQRGSPGETGPKGDRGIQGPRGITGLPGPK 534

Query: 245 GPRGNRGKSGINGVPGTPA 263
           G  G  G  G +G+PG P 
Sbjct: 535 GENGLPGLDGRDGIPGMPG 553



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/147 (44%), Positives = 79/147 (53%), Gaps = 15/147 (10%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKG 164
           E  P GL G  G +G+ G+ GE G KG+RG +G  G+ G PGP+   G+PG +G+     
Sbjct: 491 EPGPQGLPGAPGDQGQRGSPGETGPKGDRGIQGPRGITGLPGPKGENGLPGLDGR----- 545

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                   GIPG  G +G  G  G PG +GL G  GLPG PG  G+ G  G  G PG  G
Sbjct: 546 -------DGIPGMPGAKGEPGKPGPPGDVGLQGLPGLPGIPGAKGVAGEKGNSGAPGTPG 598

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           L G  G PG  G  GE G  GPRG +G
Sbjct: 599 LIGNSGKPGEQGPPGETGTRGPRGPQG 625



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/119 (42%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG +G +G KG++G PG QG  G+EG +G  GD+G  G  G  G  G+ G  G  G  
Sbjct: 424 GLPGPKGHKGAKGEIGEPGRQGHKGEEGDQGDFGDVGAQGPPGTQGLRGITGIVGAKGDK 483

Query: 212 GRNGMDGIPGKDGLPG------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G+DG PG  GLPG      + G PG  G  G++G+ GPRG  G  G  G  G P +
Sbjct: 484 GARGLDGEPGPQGLPGAPGDQGQRGSPGETGPKGDRGIQGPRGITGLPGPKGENGLPGL 542



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 51/99 (51%), Gaps = 24/99 (24%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G  G+ G +G PG+ GPPG  G+      RGPKGD+G                KGD G
Sbjct: 806 ENGFPGQMGPRGLPGLKGPPGELGL------RGPKGDLGE---------------KGDRG 844

Query: 189 YPGR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +PGR   GL G  GLPG+PGL    GR G DG  G  G+
Sbjct: 845 FPGRGPKGLPGVRGLPGDPGLASY-GREGRDGERGPQGV 882



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 94/279 (33%), Gaps = 122/279 (43%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG---------------------------------- 137
           PGL G  G+ GE G  GE G +G RG                                  
Sbjct: 597 PGLIGNSGKPGEQGPPGETGTRGPRGPQGSRGELGPIGPPGPPGKLGSQGDPGLPGVPGP 656

Query: 138 -----EKGAPGVVGPPGPQ---------------------GIPGDEGKRGPKGDMGYPGP 171
                 KG  G+VG PGP+                     G+PG +G  G  G+ G  GP
Sbjct: 657 PGLPGLKGDRGLVGEPGPKGEQGGPGEEGEAGGKGELGDVGLPGPKGSVGNPGEPGSRGP 716

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------------------ 213
           +GI G  G  GP+G    PG  G+ G  G PG PG+ G  GR                  
Sbjct: 717 EGIRGLPGVEGPRGS---PGPRGMQGEQGAPGLPGIQGPAGRAPTDQHIKQVCMRVLQEQ 773

Query: 214 ---------------------------------NGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                                            NG  G  G  GLPG  G PG  G  G 
Sbjct: 774 LAQMAASLRRPASGPAGIPGRPGPPGAPGSPGENGFPGQMGPRGLPGLKGPPGELGLRGP 833

Query: 241 KGMTGPRGNR--------GKSGINGVPGTPAICAYKRES 271
           KG  G +G+R        G  G+ G+PG P + +Y RE 
Sbjct: 834 KGDLGEKGDRGFPGRGPKGLPGVRGLPGDPGLASYGREG 872



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 82/182 (45%), Gaps = 39/182 (21%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           +G +G  G  G  G KG  GEKG  G  G PG  G  G  G++GP G+ G  GP+G  G 
Sbjct: 567 VGLQGLPGLPGIPGAKGVAGEKGNSGAPGTPGLIGNSGKPGEQGPPGETGTRGPRGPQGS 626

Query: 178 EGKRGPKGDMGYPGRIG------------------LDGRDGLPGEPGLD----------- 208
            G+ GP G  G PG++G                  L G  GL GEPG             
Sbjct: 627 RGELGPIGPPGPPGKLGSQGDPGLPGVPGPPGLPGLKGDRGLVGEPGPKGEQGGPGEEGE 686

Query: 209 ----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                     G+PG  G  G PG+ G  G +GI G  G  G +G  GPRG +G+ G  G+
Sbjct: 687 AGGKGELGDVGLPGPKGSVGNPGEPGSRGPEGIRGLPGVEGPRGSPGPRGMQGEQGAPGL 746

Query: 259 PG 260
           PG
Sbjct: 747 PG 748



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 74/193 (38%), Gaps = 75/193 (38%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGD---EGKRGPKGD- 165
           GLQG  G  G  GAKG  G KG  G  G PG++G    PG QG PG+    G RGP+G  
Sbjct: 568 GLQGLPGLPGIPGAKGVAGEKGNSGAPGTPGLIGNSGKPGEQGPPGETGTRGPRGPQGSR 627

Query: 166 -----------------------------------------MGYPGPQ------------ 172
                                                    +G PGP+            
Sbjct: 628 GELGPIGPPGPPGKLGSQGDPGLPGVPGPPGLPGLKGDRGLVGEPGPKGEQGGPGEEGEA 687

Query: 173 ---------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
                    G+PG      PKG +G PG  G  G +G+ G PG++G  G  G  G+ G+ 
Sbjct: 688 GGKGELGDVGLPG------PKGSVGNPGEPGSRGPEGIRGLPGVEGPRGSPGPRGMQGEQ 741

Query: 224 GLPGKDGIPGTNG 236
           G PG  GI G  G
Sbjct: 742 GAPGLPGIQGPAG 754



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 10/74 (13%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE-----RGEKGAPGVVGPPGPQGIP- 154
           GF         PGL+GP G+ G  G KG++G KG+     RG KG PGV G PG  G+  
Sbjct: 808 GFPGQMGPRGLPGLKGPPGELGLRGPKGDLGEKGDRGFPGRGPKGLPGVRGLPGDPGLAS 867

Query: 155 ----GDEGKRGPKG 164
               G +G+RGP+G
Sbjct: 868 YGREGRDGERGPQG 881


>gi|2326168|gb|AAB66593.1| type VII collagen [Mus musculus]
          Length = 2944

 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 91/155 (58%), Gaps = 24/155 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
            PG +G  G+ G+ G+ G +GV+G  G KG PG  G PG  G PG +G    RG KGD+G+
Sbjct: 2550 PGDKGSKGEPGDKGSAGSIGVRGLTGPKGEPGAAGIPGEPGAPGKDGIPGFRGDKGDIGF 2609

Query: 169  PGPQGIPGD---------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             GP+G+ G+         +G+RG KG+ G+PGR GL G+ G  GEPGL            
Sbjct: 2610 MGPRGLKGEKGIKGTCGRDGERGDKGEAGFPGRPGLAGKKGDMGEPGL------------ 2657

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            PG+ G PGK+G+ G  G  G  G +GP+G++G+ G
Sbjct: 2658 PGQSGAPGKEGLIGPKGDRGFDGQSGPKGDQGEKG 2692



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 95/193 (49%), Gaps = 25/193 (12%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------V 144
            G      E   PG++G  G  G+ G +G +G  G RGE+G  G                +
Sbjct: 2457 GLPGPRGERGEPGVRGEDGHPGQEGPRGLVGPPGSRGEQGEKGAAGAAGLKGDKGDSAVI 2516

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGL 201
             GPPGP+G  GD G+RGP+G  G  GP+G    PGD+G +G  GD G  G IG+ G  G 
Sbjct: 2517 EGPPGPRGAKGDMGERGPRGIDGDKGPRGESGNPGDKGSKGEPGDKGSAGSIGVRGLTGP 2576

Query: 202  PGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGI 255
             GEPG  GIPG  G    DGIPG  G  G  G  G  G  GEKG+ G     G RG  G 
Sbjct: 2577 KGEPGAAGIPGEPGAPGKDGIPGFRGDKGDIGFMGPRGLKGEKGIKGTCGRDGERGDKGE 2636

Query: 256  NGVPGTPAICAYK 268
             G PG P +   K
Sbjct: 2637 AGFPGRPGLAGKK 2649



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 90/166 (54%), Gaps = 21/166 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDM 166
            G  GP G KG++G +G  G+ G++G +G  G  G  G +G PGD+G       RG  G  
Sbjct: 2518 GPPGPRGAKGDMGERGPRGIDGDKGPRGESGNPGDKGSKGEPGDKGSAGSIGVRGLTGPK 2577

Query: 167  GYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G PG  GIPG+ G          RG KGD+G+ G  GL G  G+ G  G DG  G  G  
Sbjct: 2578 GEPGAAGIPGEPGAPGKDGIPGFRGDKGDIGFMGPRGLKGEKGIKGTCGRDGERGDKGEA 2637

Query: 218  GIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG+ GL GK       G+PG +G  G++G+ GP+G+RG  G +G
Sbjct: 2638 GFPGRPGLAGKKGDMGEPGLPGQSGAPGKEGLIGPKGDRGFDGQSG 2683



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 73/131 (55%), Gaps = 11/131 (8%)

Query: 128  GEMGVKGERGEKGAPGVV--GPPGPQGIPGDEG------KRGPKGDMGYPGPQGIPGDEG 179
            G  G  G +GE+GAPG+   G PGP+G PGD G      + GP GD G PG +G PG  G
Sbjct: 1560 GPRGASGSKGEQGAPGLALPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPG 1619

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---DGIPGTNG 236
              GP G  G  G  G  G +G+PGEPGL G  G  G+ G PG  G  G+    G PG +G
Sbjct: 1620 SPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPVGEKGDQGDPGEDG 1679

Query: 237  TNGEKGMTGPR 247
             NG  G +GP+
Sbjct: 1680 RNGSPGSSGPK 1690



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 84/196 (42%), Gaps = 50/196 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------- 158
            PG+ GP G +G  G  GE GVKGERG  G      P GPQG+PG  G             
Sbjct: 1471 PGMTGPKGDRGLTGTPGEPGVKGERGHPG------PVGPQGLPGAAGHPGVEGPEGPPGP 1524

Query: 159  --KRGPKGDMGYPGPQGI----------------PGDEGKRGPKGDMGYPGRIGLDGRDG 200
              +RG KG+ G PG   +                PG  G  G KG+ G PG         
Sbjct: 1525 TGRRGEKGEPGRPGDPAVGPGGAGAKGEKGEAGLPGPRGASGSKGEQGAPGLA------- 1577

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK------SG 254
            LPG+PG  G PG  G  G+ G+ G  G  G PG  G  G  G  GP G RG+       G
Sbjct: 1578 LPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRGRDGEAGEKG 1637

Query: 255  INGVPGTPAICAYKRE 270
              G+PG P +     E
Sbjct: 1638 DEGIPGEPGLPGKAGE 1653



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 3/104 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GPIG  G  G  G+ G  GE+GE G PG  GP GP+G    +G+ G KGD G PG 
Sbjct: 1588 PGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRG---RDGEAGEKGDEGIPGE 1644

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G+PG  G+RG +G  G  G +G  G  G PGE G +G PG +G
Sbjct: 1645 PGLPGKAGERGLRGAPGPRGPVGEKGDQGDPGEDGRNGSPGSSG 1688



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 79/176 (44%), Gaps = 38/176 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G  GERG+KG  G        G PG  GK+G  G+ G PG  
Sbjct: 2608 GFMGPRGLKGEKGIKGTCGRDGERGDKGEAGF------PGRPGLAGKKGDMGEPGLPGQS 2661

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------------- 204
            G PG EG  GPKGD G+ G+ G  G  G  GE                            
Sbjct: 2662 GAPGKEGLIGPKGDRGFDGQSGPKGDQGEKGERGPPGVGGFPGPRGNDGSSGPPGPPGGV 2721

Query: 205  --PGLDGIPGRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
               G +G+ G+ G  G PG+   G PG  G PG  G  G  G  GPRG +G++ + 
Sbjct: 2722 GPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALT 2777



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 97/234 (41%), Gaps = 47/234 (20%)

Query: 106  TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGK 159
             +E  PPGL+G    KGE G+ G+ G KG+RG  G  G VG PG +      G+PG+ G 
Sbjct: 2095 AREQGPPGLKG---AKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRGHDGNPGLPGERGV 2151

Query: 160  RGPKGDMGYPGPQGIPGDEGK------------------RGPKGDMGYPGRIGLDGRDGL 201
             GP+G  G  GP+G PG  G                   +GP G  G PG  G  GR   
Sbjct: 2152 AGPEGKPGLQGPRGTPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLP 2211

Query: 202  P--------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                                 G PGL G  G  G  G PG+DG  GKDG  G+ G  G  
Sbjct: 2212 GPVGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGVPGSP 2271

Query: 242  GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHI 295
            G+ GP G +G+ G  G PG   +     +     P      LL  P   G   +
Sbjct: 2272 GLPGPVGPKGEPGPVGAPGQVVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGL 2325



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 96/250 (38%), Gaps = 104/250 (41%)

Query: 112  PGLQGPIGQKGEIGAK-----------------------------------------GEM 130
            PG QGP G+ GE G K                                         GE 
Sbjct: 1430 PGPQGPAGRPGEKGEKGDCEDGGPGLPGQPGPPGEPGLRGAPGMTGPKGDRGLTGTPGEP 1489

Query: 131  GVKGERG---------------------------------EKGAPG-----VVGP----- 147
            GVKGERG                                 EKG PG      VGP     
Sbjct: 1490 GVKGERGHPGPVGPQGLPGAAGHPGVEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGA 1549

Query: 148  ---------PGPQGIPGDEGKRGPKGDM--GYPGPQGIPGDE------GKRGPKGDMGYP 190
                     PGP+G  G +G++G  G    G PGP+G PGD       G+ GP GD G P
Sbjct: 1550 KGEKGEAGLPGPRGASGSKGEQGAPGLALPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPP 1609

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G  GR   PG PG  G  GR+G  G  G +G+PG+ G+PG  G  G +G  GPRG  
Sbjct: 1610 GEKGEPGR---PGSPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPV 1666

Query: 251  GKSGINGVPG 260
            G+ G  G PG
Sbjct: 1667 GEKGDQGDPG 1676



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 87/222 (39%), Gaps = 77/222 (34%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G+KG+ GA G  G  G +GE+GAPG  G  GP G+PG  G  G +G  G PG 
Sbjct: 1844 PGEDGRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQVGPPG-QGFPGVPGI 1902

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDG---------------------------------- 197
             G  GD G+ G KG+ G PG  GL G                                  
Sbjct: 1903 TGPKGDRGETGSKGEQGLPGERGLAGEPGSLPNAERLLETAGIKVSALREIVDTWDESSG 1962

Query: 198  --------RDGLPGEPGLDGIPGRNGMDGIPGKDGL------------------------ 225
                    R G  G+PG  G PG+ G+ G PG+ GL                        
Sbjct: 1963 SFLPVPERRPGPKGDPGDRGPPGKEGLIGFPGERGLKGERGDPGPQGPPGLALGERGPPG 2022

Query: 226  ----------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                      PG  G+PG  G +GE G  G RG RG+ G  G
Sbjct: 2023 PPGLAGEPGKPGIPGLPGRAGGSGEAGRPGERGERGEKGERG 2064



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 95/247 (38%), Gaps = 88/247 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PGL G  G  GE G  GE G +GE+GE+G                           PG+ 
Sbjct: 2036 PGLPGRAGGSGEAGRPGERGERGEKGERGDQGRDGLPGLPGPPGPPGPKVAIEEPGPGLA 2095

Query: 146  ---GPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
               GPPG    +G PG +G  GPKGD G PG +G  G+ GKRG  G+ G PG  G+ G +
Sbjct: 2096 REQGPPGLKGAKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRGHDGNPGLPGERGVAGPE 2155

Query: 200  GLPGEPGLDGIP------------------------GRNGMDGIPGKD------------ 223
            G PG  G  G P                        G +G+ G PG+             
Sbjct: 2156 GKPGLQGPRGTPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPVG 2215

Query: 224  --------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                                GLPG+ G  G  G  G  G +G  G+RG  G+ G PG P 
Sbjct: 2216 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGVPGSPGLPG 2275

Query: 264  ICAYKRE 270
                K E
Sbjct: 2276 PVGPKGE 2282



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 94/270 (34%), Gaps = 122/270 (45%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------------ 147
            PG+ GP G +GE G+KGE G+ GERG  G PG + P                        
Sbjct: 1900 PGITGPKGDRGETGSKGEQGLPGERGLAGEPGSL-PNAERLLETAGIKVSALREIVDTWD 1958

Query: 148  -------------PGPQGIPGDEGKRGPKGDMGYPGPQGI-------------------- 174
                         PGP+G PGD G  G +G +G+PG +G+                    
Sbjct: 1959 ESSGSFLPVPERRPGPKGDPGDRGPPGKEGLIGFPGERGLKGERGDPGPQGPPGLALGER 2018

Query: 175  --------------------------------PGDEGKRGPKGDMGYPGR---------- 192
                                            PG+ G+RG KG+ G  GR          
Sbjct: 2019 GPPGPPGLAGEPGKPGIPGLPGRAGGSGEAGRPGERGERGEKGERGDQGRDGLPGLPGPP 2078

Query: 193  -------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDG 230
                                G  G  G  GEPG DG PG  G  G+PG     G PGK G
Sbjct: 2079 GPPGPKVAIEEPGPGLAREQGPPGLKGAKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRG 2138

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  GE+G+ GP G  G  G  G PG
Sbjct: 2139 HDGNPGLPGERGVAGPEGKPGLQGPRGTPG 2168



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 87/212 (41%), Gaps = 69/212 (32%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------ 159
            PG++G +G+ G+ G  G  G+ GERG  G  G  G  GP+G PG  G             
Sbjct: 2125 PGIKGDVGEPGKRGHDGNPGLPGERGVAGPEGKPGLQGPRGTPGPVGSHGDPGPPGAPGL 2184

Query: 160  ------RGPKGDMGYPG-----------------------------PQGIPGDEGKRGPK 184
                  +GP G  G PG                             PQG PG  G+ G  
Sbjct: 2185 AGPAGPQGPSGLKGEPGETGPPGRGLPGPVGAVGLPGPPGPSGLVGPQGSPGLPGQVGET 2244

Query: 185  GDMGYPGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPGK-----------DG 230
            G  G PGR G  G+DG    PG PG  G+PG  G  G PG  G PG+            G
Sbjct: 2245 GKPGPPGRDGSSGKDGDRGSPGVPGSPGLPGPVGPKGEPGPVGAPGQVVVGPPGAKGEKG 2304

Query: 231  IP--------GTNGTNGEKGMTGPRGNRGKSG 254
             P        G  G  G++G+ GPRG +G++G
Sbjct: 2305 APGDLAGALLGEPGAKGDRGLPGPRGEKGEAG 2336



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 81/197 (41%), Gaps = 60/197 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G +G+ G+ G  G  G  G+ G++G+PGV   PG  G+PG      P G  G PGP
Sbjct: 2235 PGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGV---PGSPGLPG------PVGPKGEPGP 2285

Query: 172  QGIPGD--EGKRGPKGDMGYPGRI--------GLDGRDGLPGEPGLDGIPGR-------- 213
             G PG    G  G KG+ G PG +        G  G  GLPG  G  G  GR        
Sbjct: 2286 VGAPGQVVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGLPGPRGEKGEAGRAGGPGDPG 2345

Query: 214  -NGMDGIPGKDGLPGKDGI--------------------------------PGTNGTNGE 240
             +G  G PG  GL G+ GI                                PG  G  GE
Sbjct: 2346 EDGQKGAPGLKGLKGEPGIGVQGPPGPSGPPGMKGDLGPPGAPGAPGVVGFPGQTGPRGE 2405

Query: 241  KGMTGPRGNRGKSGING 257
             G  GP G RG +G  G
Sbjct: 2406 TGQPGPVGERGLAGPPG 2422



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 72/151 (47%), Gaps = 36/151 (23%)

Query: 161  GPKGDMGYPGPQGIPGDEGKRGP------------KGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  G  G PG  G+PG  G+ GP             GD G P   GL+G++G PG+PG D
Sbjct: 1791 GASGKAGDPGRDGLPGLRGEHGPPGPPGPPGVPGKAGDDGKP---GLNGKNGDPGDPGED 1847

Query: 209  ---------GIPGRNGMD------GIPGKDGLPGKDGIPGTNGTNGEK-----GMTGPRG 248
                     G PGR G D      G PG  GL G  G+PG  G  G+      G+TGP+G
Sbjct: 1848 GRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQVGPPGQGFPGVPGITGPKG 1907

Query: 249  NRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
            +RG++G  G  G P       E  S LPN+E
Sbjct: 1908 DRGETGSKGEQGLPGERGLAGEPGS-LPNAE 1937



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 84/199 (42%), Gaps = 60/199 (30%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------------IPGDEGK- 159
            G+ G +GE G  G  GE+G   + GPPG +G                     + GD+G  
Sbjct: 2398 GQTGPRGETGQPGPVGERG---LAGPPGREGAPGPLGPPGPPGSAGAPGASGLKGDKGDP 2454

Query: 160  ----RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR----------------- 198
                 GP+G+ G PG +G  G  G+ GP+G +G PG  G  G                  
Sbjct: 2455 GAGLPGPRGERGEPGVRGEDGHPGQEGPRGLVGPPGSRGEQGEKGAAGAAGLKGDKGDSA 2514

Query: 199  --DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE------------KGMT 244
              +G PG  G  G  G  G  GI G  G  G+ G PG  G+ GE            +G+T
Sbjct: 2515 VIEGPPGPRGAKGDMGERGPRGIDGDKGPRGESGNPGDKGSKGEPGDKGSAGSIGVRGLT 2574

Query: 245  GPRGNRGKSGINGVPGTPA 263
            GP+G  G +GI G PG P 
Sbjct: 2575 GPKGEPGAAGIPGEPGAPG 2593



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 97/270 (35%), Gaps = 106/270 (39%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S     P G  G  G+KG+ G  GE G+ G+ GE+G  G  GP GP G  GD+G  
Sbjct: 1616 GRPGSPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPVGEKGDQGDP 1675

Query: 161  GPKGDMGYPGP----------------------------QGIPGDE-------------- 178
            G  G  G PG                             +G PG E              
Sbjct: 1676 GEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDAGIESRDKGEPGQEGPRGPKGDPGPPGV 1735

Query: 179  -GKRG------------------PKGDMGYPGRIGLDGRDGL------------------ 201
             G+RG                  P GD G  G  GLDGR GL                  
Sbjct: 1736 SGERGIDGLRGPPGPQGDPGVRGPAGDKGDRGPPGLDGRSGLDGKPGAPGPPGLHGASGK 1795

Query: 202  PGEPGLDGIPG------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G+PG DG+PG                  + G DG PG +G  G  G PG +G  GEKG 
Sbjct: 1796 AGDPGRDGLPGLRGEHGPPGPPGPPGVPGKAGDDGKPGLNGKNGDPGDPGEDGRKGEKGD 1855

Query: 244  T---------GPRGNRGKSGINGVPGTPAI 264
            +         GP+G RG  G  G+ G P +
Sbjct: 1856 SGAPGREGPDGPKGERGAPGNPGLQGPPGL 1885



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 15/110 (13%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            + + G    T +  PPG +G  G+ G  G  G  G  GE GEKG  G+   PG  G+PG 
Sbjct: 1594 IGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRGRDGEAGEKGDEGI---PGEPGLPGK 1650

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             G+RG +   G PGP+G  G+      KGD G PG    DGR+G PG  G
Sbjct: 1651 AGERGLR---GAPGPRGPVGE------KGDQGDPGE---DGRNGSPGSSG 1688



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 25/126 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G   + G+ G  GE G KGE+G+ GAPG               + GP G  G    
Sbjct: 1832 PGLNG---KNGDPGDPGEDGRKGEKGDSGAPG---------------REGPDGPKGE--- 1870

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            +G PG+ G +GP    G PG++G  G+ G PG PG+ G  G  G  G  G+ GLPG+ G+
Sbjct: 1871 RGAPGNPGLQGPP---GLPGQVGPPGQ-GFPGVPGITGPKGDRGETGSKGEQGLPGERGL 1926

Query: 232  PGTNGT 237
             G  G+
Sbjct: 1927 AGEPGS 1932



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 70/154 (45%), Gaps = 29/154 (18%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---- 186
            G KG+RGE+G      PPGP     ++G  G  G  G PGPQG  G  G++G KGD    
Sbjct: 1398 GDKGDRGERG------PPGPGIGASEQGDPGLPGLPGSPGPQGPAGRPGEKGEKGDCEDG 1451

Query: 187  ----------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
                             G PG  G  G  GL G PG  G+ G  G  G  G  GLPG  G
Sbjct: 1452 GPGLPGQPGPPGEPGLRGAPGMTGPKGDRGLTGTPGEPGVKGERGHPGPVGPQGLPGAAG 1511

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             PG  G  G  G TG    RG+ G  G PG PA+
Sbjct: 1512 HPGVEGPEGPPGPTG---RRGEKGEPGRPGDPAV 1542



 Score = 43.1 bits (100), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 67/161 (41%), Gaps = 37/161 (22%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G C    E    G  G  G+ G  G KG+MG  G  G+ GAPG  G  GP+G  G +
Sbjct: 2620 GIKGTCGRDGERGDKGEAGFPGRPGLAGKKGDMGEPGLPGQSGAPGKEGLIGPKGDRGFD 2679

Query: 158  GKRGPKGDMGYPGPQ---------------------------------GIPGDEGKRGPK 184
            G+ GPKGD G  G +                                 G+ G +G+RGP 
Sbjct: 2680 GQSGPKGDQGEKGERGPPGVGGFPGPRGNDGSSGPPGPPGGVGPKGPEGLQGQKGERGPP 2739

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G+      +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 2740 GES----VVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAAL 2776


>gi|111600306|gb|AAI18971.1| Collagen, type XIX, alpha 1 [Mus musculus]
          Length = 1136

 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 95/193 (49%), Gaps = 41/193 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  G +G KG  G  GE   KGE+G++G PG++GP                      G 
Sbjct: 461 PGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEPGDPGPPGLLGSPGLKGQ 520

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD----MGYPGRIGLDGRDG-----L 201
           QG  G  G RGP GD+G PG  GIPG +G +G KGD    +G PG  GL G  G     L
Sbjct: 521 QGPAGSMGPRGPPGDVGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDAGPPGISL 580

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGMTGPRGNR 250
           PG+PGLDG PG  G  G  G+ GLPG             GIPG  G+ G  G  G +G R
Sbjct: 581 PGKPGLDGNPGSPGPRGPKGERGLPGLHGSPGDTGPPGVGIPGRTGSQGPAGEPGIQGPR 640

Query: 251 GKSGINGVPGTPA 263
           G  G+ G PG P 
Sbjct: 641 GLPGLPGTPGMPG 653



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 87/178 (48%), Gaps = 45/178 (25%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG---PQGI---- 174
           GE GA G  G KG+ G  G PG VGP G +G PG+   +G KGD G PG   PQGI    
Sbjct: 444 GEHGASGPKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEP 503

Query: 175 -----------PGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                      PG +G++GP G MG    PG +GL         PG  GIPG+ G+ G  
Sbjct: 504 GDPGPPGLLGSPGLKGQQGPAGSMGPRGPPGDVGL---------PGEHGIPGKQGVKGEK 554

Query: 221 GK-------DGLPGKDG--------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G         GLPG  G        +PG  G +G  G  GPRG +G+ G+ G+ G+P 
Sbjct: 555 GDPGGRLGPPGLPGLKGDAGPPGISLPGKPGLDGNPGSPGPRGPKGERGLPGLHGSPG 612



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 68/147 (46%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA-------PGVVGPP 148
           L   QG   S     PPG    +G  GE G  G+ GVKGE+G+ G        PG+ G  
Sbjct: 517 LKGQQGPAGSMGPRGPPGD---VGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDA 573

Query: 149 GPQGI-----------PGDEGKRGPKGDMGYPGPQGIPGDEG-----------KRGPKGD 186
           GP GI           PG  G RGPKG+ G PG  G PGD G            +GP G+
Sbjct: 574 GPPGISLPGKPGLDGNPGSPGPRGPKGERGLPGLHGSPGDTGPPGVGIPGRTGSQGPAGE 633

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG PG+
Sbjct: 634 PGIQGPRGLPGLPGTPGMPGNDGAPGK 660



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 68/133 (51%), Gaps = 27/133 (20%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPG- 191
           PG  G+PG EG  G KGD G  GP GI G               ++G+RGP GD G+PG 
Sbjct: 853 PGAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPGPPGVPGEQGERGPIGDTGFPGP 912

Query: 192 -----RIGLDGRDGLPGEPGLDGIP------GRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                + G++G+DGLPG  G+ G P      G  G  GIPG  G  G+ G PG  G  G 
Sbjct: 913 EGPSGKPGINGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGERGKPGLTGMKGA 972

Query: 241 KGMTGPRGNRGKS 253
            G  GP G++G +
Sbjct: 973 IGPVGPAGSKGST 985



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 90/223 (40%), Gaps = 65/223 (29%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPP------ 148
           G++G IG+KGE GAKG+ G+ G  G+                  KG  G  GPP      
Sbjct: 331 GIKGEIGEKGEPGAKGDSGLDGLNGQDGLKGDSGPQGPPGPKGDKGDMGPPGPPALTGSI 390

Query: 149 ---GPQGIPGDEGKRGPKGDM-------------------------GY----PGPQGIPG 176
              GPQG PG EG+RG +G                           GY     G  G  G
Sbjct: 391 GIQGPQGPPGKEGQRGRRGKTGPPGNPGPPGPPGPPGLQGLQQPFGGYFNKGTGEHGASG 450

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI----- 231
            +G++G  G  G+PG +G  G  G PGEP   G  G  G  G+ G  G+ G+ G      
Sbjct: 451 PKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEPGDPGPPG 510

Query: 232 ----PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
               PG  G  G  G  GPRG  G  G+ G  G P     K E
Sbjct: 511 LLGSPGLKGQQGPAGSMGPRGPPGDVGLPGEHGIPGKQGVKGE 553


>gi|115647999|ref|NP_031764.2| collagen alpha-1(VII) chain precursor [Mus musculus]
 gi|143955303|sp|Q63870.3|CO7A1_MOUSE RecName: Full=Collagen alpha-1(VII) chain; AltName: Full=Long-chain
            collagen; Short=LC collagen; Flags: Precursor
          Length = 2944

 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 91/155 (58%), Gaps = 24/155 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
            PG +G  G+ G+ G+ G +GV+G  G KG PG  G PG  G PG +G    RG KGD+G+
Sbjct: 2550 PGDKGSKGEPGDKGSAGSIGVRGLTGPKGEPGAAGIPGEPGAPGKDGIPGFRGDKGDIGF 2609

Query: 169  PGPQGIPGD---------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             GP+G+ G+         +G+RG KG+ G+PGR GL G+ G  GEPGL            
Sbjct: 2610 MGPRGLKGEKGIKGTCGRDGERGDKGEAGFPGRPGLAGKKGDMGEPGL------------ 2657

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            PG+ G PGK+G+ G  G  G  G +GP+G++G+ G
Sbjct: 2658 PGQSGAPGKEGLIGPKGDRGFDGQSGPKGDQGEKG 2692



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 95/193 (49%), Gaps = 25/193 (12%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------V 144
            G      E   PG++G  G  G+ G +G +G  G RGE+G  G                +
Sbjct: 2457 GLPGPRGERGEPGVRGEDGHPGQEGPRGLVGPPGSRGEQGEKGAAGAAGLKGDKGDSAVI 2516

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGL 201
             GPPGP+G  GD G+RGP+G  G  GP+G    PGD+G +G  GD G  G IG+ G  G 
Sbjct: 2517 EGPPGPRGAKGDMGERGPRGIDGDKGPRGESGNPGDKGSKGEPGDKGSAGSIGVRGLTGP 2576

Query: 202  PGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGI 255
             GEPG  GIPG  G    DGIPG  G  G  G  G  G  GEKG+ G     G RG  G 
Sbjct: 2577 KGEPGAAGIPGEPGAPGKDGIPGFRGDKGDIGFMGPRGLKGEKGIKGTCGRDGERGDKGE 2636

Query: 256  NGVPGTPAICAYK 268
             G PG P +   K
Sbjct: 2637 AGFPGRPGLAGKK 2649



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 90/166 (54%), Gaps = 21/166 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDM 166
            G  GP G KG++G +G  G+ G++G +G  G  G  G +G PGD+G       RG  G  
Sbjct: 2518 GPPGPRGAKGDMGERGPRGIDGDKGPRGESGNPGDKGSKGEPGDKGSAGSIGVRGLTGPK 2577

Query: 167  GYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G PG  GIPG+ G          RG KGD+G+ G  GL G  G+ G  G DG  G  G  
Sbjct: 2578 GEPGAAGIPGEPGAPGKDGIPGFRGDKGDIGFMGPRGLKGEKGIKGTCGRDGERGDKGEA 2637

Query: 218  GIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG+ GL GK       G+PG +G  G++G+ GP+G+RG  G +G
Sbjct: 2638 GFPGRPGLAGKKGDMGEPGLPGQSGAPGKEGLIGPKGDRGFDGQSG 2683



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 73/131 (55%), Gaps = 11/131 (8%)

Query: 128  GEMGVKGERGEKGAPGVV--GPPGPQGIPGDEG------KRGPKGDMGYPGPQGIPGDEG 179
            G  G  G +GE+GAPG+   G PGP+G PGD G      + GP GD G PG +G PG  G
Sbjct: 1560 GPRGASGSKGEQGAPGLALPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPG 1619

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---DGIPGTNG 236
              GP G  G  G  G  G +G+PGEPGL G  G  G+ G PG  G  G+    G PG +G
Sbjct: 1620 SPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPVGEKGDQGDPGEDG 1679

Query: 237  TNGEKGMTGPR 247
             NG  G +GP+
Sbjct: 1680 RNGSPGSSGPK 1690



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 84/196 (42%), Gaps = 50/196 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------- 158
            PG+ GP G +G  G  GE GVKGERG  G      P GPQG+PG  G             
Sbjct: 1471 PGMTGPKGDRGLTGTPGEPGVKGERGHPG------PVGPQGLPGAAGHPGVEGPEGPPGP 1524

Query: 159  --KRGPKGDMGYPGPQGI----------------PGDEGKRGPKGDMGYPGRIGLDGRDG 200
              +RG KG+ G PG   +                PG  G  G KG+ G PG         
Sbjct: 1525 TGRRGEKGEPGRPGDPAVGPGGAGAKGEKGEAGLPGPRGASGSKGEQGAPGLA------- 1577

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK------SG 254
            LPG+PG  G PG  G  G+ G+ G  G  G PG  G  G  G  GP G RG+       G
Sbjct: 1578 LPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRGRDGEAGEKG 1637

Query: 255  INGVPGTPAICAYKRE 270
              G+PG P +     E
Sbjct: 1638 DEGIPGEPGLPGKAGE 1653



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 3/104 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GPIG  G  G  G+ G  GE+GE G PG  GP GP+G    +G+ G KGD G PG 
Sbjct: 1588 PGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRG---RDGEAGEKGDEGIPGE 1644

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G+PG  G+RG +G  G  G +G  G  G PGE G +G PG +G
Sbjct: 1645 PGLPGKAGERGLRGAPGPRGPVGEKGDQGDPGEDGRNGSPGSSG 1688



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 79/176 (44%), Gaps = 38/176 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G  GERG+KG  G        G PG  GK+G  G+ G PG  
Sbjct: 2608 GFMGPRGLKGEKGIKGTCGRDGERGDKGEAGF------PGRPGLAGKKGDMGEPGLPGQS 2661

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------------- 204
            G PG EG  GPKGD G+ G+ G  G  G  GE                            
Sbjct: 2662 GAPGKEGLIGPKGDRGFDGQSGPKGDQGEKGERGPPGVGGFPGPRGNDGSSGPPGPPGGV 2721

Query: 205  --PGLDGIPGRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
               G +G+ G+ G  G PG+   G PG  G PG  G  G  G  GPRG +G++ + 
Sbjct: 2722 GPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALT 2777



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 97/234 (41%), Gaps = 47/234 (20%)

Query: 106  TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGK 159
             +E  PPGL+G    KGE G+ G+ G KG+RG  G  G VG PG +      G+PG+ G 
Sbjct: 2095 AREQGPPGLKG---AKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRGHDGNPGLPGERGV 2151

Query: 160  RGPKGDMGYPGPQGIPGDEGK------------------RGPKGDMGYPGRIGLDGRDGL 201
             GP+G  G  GP+G PG  G                   +GP G  G PG  G  GR   
Sbjct: 2152 AGPEGKPGLQGPRGTPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLP 2211

Query: 202  P--------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                                 G PGL G  G  G  G PG+DG  GKDG  G+ G  G  
Sbjct: 2212 GPVGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGVPGSP 2271

Query: 242  GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHI 295
            G+ GP G +G+ G  G PG   +     +     P      LL  P   G   +
Sbjct: 2272 GLPGPVGPKGEPGPVGAPGQVVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGL 2325



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 96/250 (38%), Gaps = 104/250 (41%)

Query: 112  PGLQGPIGQKGEIGAK-----------------------------------------GEM 130
            PG QGP G+ GE G K                                         GE 
Sbjct: 1430 PGPQGPAGRPGEKGEKGDCEDGGPGLPGQPGPPGEPGLRGAPGMTGPKGDRGLTGTPGEP 1489

Query: 131  GVKGERG---------------------------------EKGAPG-----VVGP----- 147
            GVKGERG                                 EKG PG      VGP     
Sbjct: 1490 GVKGERGHPGPVGPQGLPGAAGHPGVEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGA 1549

Query: 148  ---------PGPQGIPGDEGKRGPKGDM--GYPGPQGIPGDE------GKRGPKGDMGYP 190
                     PGP+G  G +G++G  G    G PGP+G PGD       G+ GP GD G P
Sbjct: 1550 KGEKGEAGLPGPRGASGSKGEQGAPGLALPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPP 1609

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G  GR   PG PG  G  GR+G  G  G +G+PG+ G+PG  G  G +G  GPRG  
Sbjct: 1610 GEKGEPGR---PGSPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPV 1666

Query: 251  GKSGINGVPG 260
            G+ G  G PG
Sbjct: 1667 GEKGDQGDPG 1676



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 87/222 (39%), Gaps = 77/222 (34%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G+KG+ GA G  G  G +GE+GAPG  G  GP G+PG  G  G +G  G PG 
Sbjct: 1844 PGEDGRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQVGPPG-QGFPGVPGI 1902

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDG---------------------------------- 197
             G  GD G+ G KG+ G PG  GL G                                  
Sbjct: 1903 TGPKGDRGETGSKGEQGLPGERGLRGEPGSLPNAERLLETAGIKVSALREIVDTWDESSG 1962

Query: 198  --------RDGLPGEPGLDGIPGRNGMDGIPGKDGL------------------------ 225
                    R G  G+PG  G PG+ G+ G PG+ GL                        
Sbjct: 1963 SFLPVPERRPGPKGDPGDRGPPGKEGLIGFPGERGLKGERGDPGPQGPPGLALGERGPPG 2022

Query: 226  ----------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                      PG  G+PG  G +GE G  G RG RG+ G  G
Sbjct: 2023 PPGLAGEPGKPGIPGLPGRAGGSGEAGRPGERGERGEKGERG 2064



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 95/247 (38%), Gaps = 88/247 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PGL G  G  GE G  GE G +GE+GE+G                           PG+ 
Sbjct: 2036 PGLPGRAGGSGEAGRPGERGERGEKGERGDQGRDGLPGLPGPPGPPGPKVAIEEPGPGLA 2095

Query: 146  ---GPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
               GPPG    +G PG +G  GPKGD G PG +G  G+ GKRG  G+ G PG  G+ G +
Sbjct: 2096 REQGPPGLKGAKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRGHDGNPGLPGERGVAGPE 2155

Query: 200  GLPGEPGLDGIP------------------------GRNGMDGIPGKD------------ 223
            G PG  G  G P                        G +G+ G PG+             
Sbjct: 2156 GKPGLQGPRGTPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPVG 2215

Query: 224  --------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                                GLPG+ G  G  G  G  G +G  G+RG  G+ G PG P 
Sbjct: 2216 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGVPGSPGLPG 2275

Query: 264  ICAYKRE 270
                K E
Sbjct: 2276 PVGPKGE 2282



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 95/270 (35%), Gaps = 122/270 (45%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------------ 147
            PG+ GP G +GE G+KGE G+ GERG +G PG + P                        
Sbjct: 1900 PGITGPKGDRGETGSKGEQGLPGERGLRGEPGSL-PNAERLLETAGIKVSALREIVDTWD 1958

Query: 148  -------------PGPQGIPGDEGKRGPKGDMGYPGPQGI-------------------- 174
                         PGP+G PGD G  G +G +G+PG +G+                    
Sbjct: 1959 ESSGSFLPVPERRPGPKGDPGDRGPPGKEGLIGFPGERGLKGERGDPGPQGPPGLALGER 2018

Query: 175  --------------------------------PGDEGKRGPKGDMGYPGR---------- 192
                                            PG+ G+RG KG+ G  GR          
Sbjct: 2019 GPPGPPGLAGEPGKPGIPGLPGRAGGSGEAGRPGERGERGEKGERGDQGRDGLPGLPGPP 2078

Query: 193  -------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDG 230
                                G  G  G  GEPG DG PG  G  G+PG     G PGK G
Sbjct: 2079 GPPGPKVAIEEPGPGLAREQGPPGLKGAKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRG 2138

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  GE+G+ GP G  G  G  G PG
Sbjct: 2139 HDGNPGLPGERGVAGPEGKPGLQGPRGTPG 2168



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 87/212 (41%), Gaps = 69/212 (32%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------ 159
            PG++G +G+ G+ G  G  G+ GERG  G  G  G  GP+G PG  G             
Sbjct: 2125 PGIKGDVGEPGKRGHDGNPGLPGERGVAGPEGKPGLQGPRGTPGPVGSHGDPGPPGAPGL 2184

Query: 160  ------RGPKGDMGYPG-----------------------------PQGIPGDEGKRGPK 184
                  +GP G  G PG                             PQG PG  G+ G  
Sbjct: 2185 AGPAGPQGPSGLKGEPGETGPPGRGLPGPVGAVGLPGPPGPSGLVGPQGSPGLPGQVGET 2244

Query: 185  GDMGYPGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPGK-----------DG 230
            G  G PGR G  G+DG    PG PG  G+PG  G  G PG  G PG+            G
Sbjct: 2245 GKPGPPGRDGSSGKDGDRGSPGVPGSPGLPGPVGPKGEPGPVGAPGQVVVGPPGAKGEKG 2304

Query: 231  IP--------GTNGTNGEKGMTGPRGNRGKSG 254
             P        G  G  G++G+ GPRG +G++G
Sbjct: 2305 APGDLAGALLGEPGAKGDRGLPGPRGEKGEAG 2336



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 73/151 (48%), Gaps = 36/151 (23%)

Query: 161  GPKGDMGYPGPQGIPGDEGKRGP------------KGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  G  G PG  G+PG  G+ GP             GD G P   GL+G++G PG+PG D
Sbjct: 1791 GASGKAGDPGRDGLPGLRGEHGPPGPPGPPGVPGKAGDDGKP---GLNGKNGDPGDPGED 1847

Query: 209  ---------GIPGRNGMD------GIPGKDGLPGKDGIPGTNGTNGEK-----GMTGPRG 248
                     G PGR G D      G PG  GL G  G+PG  G  G+      G+TGP+G
Sbjct: 1848 GRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQVGPPGQGFPGVPGITGPKG 1907

Query: 249  NRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
            +RG++G  G  G P     + E  S LPN+E
Sbjct: 1908 DRGETGSKGEQGLPGERGLRGEPGS-LPNAE 1937



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 81/197 (41%), Gaps = 60/197 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G +G+ G+ G  G  G  G+ G++G+PGV   PG  G+PG      P G  G PGP
Sbjct: 2235 PGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGV---PGSPGLPG------PVGPKGEPGP 2285

Query: 172  QGIPGD--EGKRGPKGDMGYPGRI--------GLDGRDGLPGEPGLDGIPGR-------- 213
             G PG    G  G KG+ G PG +        G  G  GLPG  G  G  GR        
Sbjct: 2286 VGAPGQVVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGLPGPRGEKGEAGRAGGPGDPG 2345

Query: 214  -NGMDGIPGKDGLPGKDGI--------------------------------PGTNGTNGE 240
             +G  G PG  GL G+ GI                                PG  G  GE
Sbjct: 2346 EDGQKGAPGLKGLKGEPGIGVQGPPGPSGPPGMKGDLGPPGAPGAPGVVGFPGQTGPRGE 2405

Query: 241  KGMTGPRGNRGKSGING 257
             G  GP G RG +G  G
Sbjct: 2406 TGQPGPVGERGLAGPPG 2422



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 84/199 (42%), Gaps = 60/199 (30%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------------IPGDEGK- 159
            G+ G +GE G  G  GE+G   + GPPG +G                     + GD+G  
Sbjct: 2398 GQTGPRGETGQPGPVGERG---LAGPPGREGAPGPLGPPGPPGSAGAPGASGLKGDKGDP 2454

Query: 160  ----RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR----------------- 198
                 GP+G+ G PG +G  G  G+ GP+G +G PG  G  G                  
Sbjct: 2455 GAGLPGPRGERGEPGVRGEDGHPGQEGPRGLVGPPGSRGEQGEKGAAGAAGLKGDKGDSA 2514

Query: 199  --DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE------------KGMT 244
              +G PG  G  G  G  G  GI G  G  G+ G PG  G+ GE            +G+T
Sbjct: 2515 VIEGPPGPRGAKGDMGERGPRGIDGDKGPRGESGNPGDKGSKGEPGDKGSAGSIGVRGLT 2574

Query: 245  GPRGNRGKSGINGVPGTPA 263
            GP+G  G +GI G PG P 
Sbjct: 2575 GPKGEPGAAGIPGEPGAPG 2593



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 97/270 (35%), Gaps = 106/270 (39%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S     P G  G  G+KG+ G  GE G+ G+ GE+G  G  GP GP G  GD+G  
Sbjct: 1616 GRPGSPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPVGEKGDQGDP 1675

Query: 161  GPKGDMGYPGP----------------------------QGIPGDE-------------- 178
            G  G  G PG                             +G PG E              
Sbjct: 1676 GEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDAGIESRDKGEPGQEGPRGPKGDPGPPGV 1735

Query: 179  -GKRG------------------PKGDMGYPGRIGLDGRDGL------------------ 201
             G+RG                  P GD G  G  GLDGR GL                  
Sbjct: 1736 SGERGIDGLRGPPGPQGDPGVRGPAGDKGDRGPPGLDGRSGLDGKPGAPGPPGLHGASGK 1795

Query: 202  PGEPGLDGIPG------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G+PG DG+PG                  + G DG PG +G  G  G PG +G  GEKG 
Sbjct: 1796 AGDPGRDGLPGLRGEHGPPGPPGPPGVPGKAGDDGKPGLNGKNGDPGDPGEDGRKGEKGD 1855

Query: 244  T---------GPRGNRGKSGINGVPGTPAI 264
            +         GP+G RG  G  G+ G P +
Sbjct: 1856 SGAPGREGPDGPKGERGAPGNPGLQGPPGL 1885



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 15/110 (13%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            + + G    T +  PPG +G  G+ G  G  G  G  GE GEKG  G+   PG  G+PG 
Sbjct: 1594 IGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRGRDGEAGEKGDEGI---PGEPGLPGK 1650

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             G+RG +   G PGP+G  G+      KGD G PG    DGR+G PG  G
Sbjct: 1651 AGERGLR---GAPGPRGPVGE------KGDQGDPGE---DGRNGSPGSSG 1688



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 64/143 (44%), Gaps = 43/143 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G   + G+ G  GE G KGE+G+ GAPG               + GP         
Sbjct: 1832 PGLNG---KNGDPGDPGEDGRKGEKGDSGAPG---------------REGPD-------- 1865

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                      GPKG+ G PG  GL G  GLPG+ G  G        G PG  G+ G  G 
Sbjct: 1866 ----------GPKGERGAPGNPGLQGPPGLPGQVGPPG-------QGFPGVPGITGPKGD 1908

Query: 232  PGTNGTNGEKGMTGPRGNRGKSG 254
             G  G+ GE+G+ G RG RG+ G
Sbjct: 1909 RGETGSKGEQGLPGERGLRGEPG 1931



 Score = 43.1 bits (100), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 70/154 (45%), Gaps = 29/154 (18%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---- 186
            G KG+RGE+G      PPGP     ++G  G  G  G PGPQG  G  G++G KGD    
Sbjct: 1398 GDKGDRGERG------PPGPGIGASEQGDPGLPGLPGSPGPQGPAGRPGEKGEKGDCEDG 1451

Query: 187  ----------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
                             G PG  G  G  GL G PG  G+ G  G  G  G  GLPG  G
Sbjct: 1452 GPGLPGQPGPPGEPGLRGAPGMTGPKGDRGLTGTPGEPGVKGERGHPGPVGPQGLPGAAG 1511

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             PG  G  G  G TG    RG+ G  G PG PA+
Sbjct: 1512 HPGVEGPEGPPGPTG---RRGEKGEPGRPGDPAV 1542



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 67/161 (41%), Gaps = 37/161 (22%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G C    E    G  G  G+ G  G KG+MG  G  G+ GAPG  G  GP+G  G +
Sbjct: 2620 GIKGTCGRDGERGDKGEAGFPGRPGLAGKKGDMGEPGLPGQSGAPGKEGLIGPKGDRGFD 2679

Query: 158  GKRGPKGDMGYPGPQ---------------------------------GIPGDEGKRGPK 184
            G+ GPKGD G  G +                                 G+ G +G+RGP 
Sbjct: 2680 GQSGPKGDQGEKGERGPPGVGGFPGPRGNDGSSGPPGPPGGVGPKGPEGLQGQKGERGPP 2739

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G+      +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 2740 GES----VVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAAL 2776


>gi|495866|gb|AAA58965.1| collagen type VII [Homo sapiens]
          Length = 2912

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/192 (40%), Positives = 101/192 (52%), Gaps = 28/192 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD 156
             ++G      +  P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD
Sbjct: 2446 GIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGD 2505

Query: 157  EGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G+RGP+G  G  GP+   G PGD+G +G  GD G  G  GL G  G  G+P        
Sbjct: 2506 MGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQP-------- 2557

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV--------------- 258
             G  GIPG  G PGKDG+PG  G  G+ G  GPRG +G+ G+ G                
Sbjct: 2558 -GAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGP 2616

Query: 259  PGTPAICAYKRE 270
            PG P +  +K E
Sbjct: 2617 PGRPGLAGHKGE 2628



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 94/179 (52%), Gaps = 21/179 (11%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------------PGV 144
            +G      E  P GL G  G +G+ G  G+ G KGE G+KG+               PG 
Sbjct: 2500 RGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGA 2559

Query: 145  VGPPGPQGIPGDEGK---RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
             G PG  G PG +G    RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G 
Sbjct: 2560 AGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGP 2616

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG PGL G  G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G  G PG
Sbjct: 2617 PGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 2675



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 97/223 (43%), Gaps = 67/223 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                    PG   
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGARE 1717

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGL 195
            +G PGD G+ GP+G  G PG  G PG+ G                RGP G+ G  G  GL
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------KDGI 231
            DGR GL G+PG  G  G NG  G    PG+DGLPG                     +DG 
Sbjct: 1778 DGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGK 1837

Query: 232  PGTNGTNGEK------GMTGPRGNRGKSGINGVPGTPAICAYK 268
            PG NG NGE       G  G +G+ G SG  G PG P     K
Sbjct: 1838 PGLNGKNGEPGDPGEDGRKGEKGDSGASGREGFPGVPGGTGPK 1880



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 106/259 (40%), Gaps = 37/259 (14%)

Query: 25   PIISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNP 84
            P  +K ++  R  R +D DKG   DN  P     +  P D         +          
Sbjct: 2499 PRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPG 2558

Query: 85   WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
               +      P     G      E    G  GP G KGE G KG  G+ GE+G+KG  G 
Sbjct: 2559 AAGIPGDPGSP--GKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAG- 2615

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                 P G PG  G +G  G+ G PG  G PG EG  GPKGD G+ G+ G  G  G  GE
Sbjct: 2616 -----PPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGE 2670

Query: 205  ---PGLDGIPGRNGMD---------------------GIPGKDGLPGKD-----GIPGTN 235
               PG+ G PG +G D                     G  G+ G PG+      G+PG  
Sbjct: 2671 RGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAP 2730

Query: 236  GTNGEKGMTGPRGNRGKSG 254
            G  GE+G  GP G RG+ G
Sbjct: 2731 GERGEQGRPGPAGPRGEKG 2749



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 79/173 (45%), Gaps = 34/173 (19%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
               K  C  GL G  G KGE G  G  G+ G +GE G PGV   PG  G PG EG  GPK
Sbjct: 2596 RGVKGAC--GLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGV---PGQSGAPGKEGLIGPK 2650

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--------------- 208
            GD G+         +G+ GPKGD G  G  G  G  G PG  G D               
Sbjct: 2651 GDRGF---------DGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPR 2701

Query: 209  ---GIPGRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
               G+ G+ G  G PG+   G PG  G PG  G  G  G  GPRG +G++ + 
Sbjct: 2702 GPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAALT 2754



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 88/190 (46%), Gaps = 46/190 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++G+P         G VGP   PGP G PG    
Sbjct: 2212 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2271

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLD---GI 210
            G  G KG+ G PG  G+ GD  G+ G KGD G P   G  G  GR G PG+PG D   G 
Sbjct: 2272 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGA 2329

Query: 211  PGRNGMD-----------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            PG  G                         G+PG  G PG  G PG  G  GE G  GP 
Sbjct: 2330 PGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPS 2389

Query: 248  GNRGKSGING 257
            G RG +G  G
Sbjct: 2390 GERGLAGPPG 2399



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 78/141 (55%), Gaps = 12/141 (8%)

Query: 133  KGERG--EKGAPGVVGPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPK 184
            KGE+G  E GAPG+   PG  G PG++G RGP      KGD G+PGP G  G++G+RGP 
Sbjct: 1444 KGEKGDSEDGAPGL---PGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP 1500

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  
Sbjct: 1501 GPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDV 1559

Query: 245  GPRGNRGKSGINGVPGTPAIC 265
            GP G RG +G+ G  G P + 
Sbjct: 1560 GPAGPRGATGVQGERGPPGLV 1580



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 89/199 (44%), Gaps = 60/199 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------------------- 143
            GL GP G+KGE G  GE G  GE G+KGAPG                             
Sbjct: 2301 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLG 2360

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKR------------------- 181
            + G PG  G+ G  G+ GP+G+MG PGP   +G+ G  G+                    
Sbjct: 2361 LPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPG 2420

Query: 182  --GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
              G KGD G PG +GL G  G  GEPG+       G DG PG++G  G  G PG+ G  G
Sbjct: 2421 ASGLKGDKGDPG-VGLPGPRGERGEPGI------RGEDGRPGQEGPRGLTGPPGSRGERG 2473

Query: 240  EKGMTGPRGNRGKSGINGV 258
            EKG  G  G +G  G + V
Sbjct: 2474 EKGDVGSAGLKGDKGDSAV 2492



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 88/210 (41%), Gaps = 73/210 (34%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G   + GE G  GE G KGE+G+ GA G  G PG   +PG  G +G +G+ G  G 
Sbjct: 1838 PGLNG---KNGEPGDPGEDGRKGEKGDSGASGREGFPG---VPGGTGPKGDRGETGSKGE 1891

Query: 172  QGIPGDEG---------------------------------------------KRGPKGD 186
            QG+PG+ G                                             +RGPKGD
Sbjct: 1892 QGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPVPERRRGPKGD 1951

Query: 187  MGYPGRIGLDGRDGLPGEPGLD-------------------GIPGRNGMDGIPGKDGLPG 227
             G  G  G +G  G PGE GL                    G PG +G+ G PGK G+P 
Sbjct: 1952 SGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIP- 2010

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G+PG  G  GE G  G RG RG+ G  G
Sbjct: 2011 --GLPGRAGGVGEAGRPGERGERGEKGERG 2038



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 93/255 (36%), Gaps = 106/255 (41%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G+ G  G +GE G KGERGE+G                           PG+ 
Sbjct: 2013 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2072

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG  G +GPKGD G PG +G  G+ G RG  G+ G PG  G+ G +
Sbjct: 2073 GEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2132

Query: 200  ---------------------------------------GLPGEPGLDGIPGRN------ 214
                                                   GL GEPG  G PGR       
Sbjct: 2133 GKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTG 2192

Query: 215  -----------------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                                         G  G PG+DG  GKDG  G+ G  G  G+ G
Sbjct: 2193 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPG 2252

Query: 246  PRGNRGKSGINGVPG 260
            P G +G+ G  G PG
Sbjct: 2253 PVGPKGEPGPTGAPG 2267



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 88/175 (50%), Gaps = 24/175 (13%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++GF         PG++GP G+KG+   +G  G+ G  G  G PG  GP GP G     
Sbjct: 1746 GIEGFRGPPGPQGDPGVRGPAGEKGD---RGPPGLDGRSGLDGKPGAAGPSGPNGA---- 1798

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLD 208
                  G  G PG  G+PG  G++G  G  G P         G+ GL+G++G PG+PG D
Sbjct: 1799 -----AGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGED 1853

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G  G  G++G P   G+PG  G  G++G TG +G +G  G  G+ G P 
Sbjct: 1854 GRKGEKGDSGASGREGFP---GVPGGTGPKGDRGETGSKGEQGLPGERGLRGEPG 1905



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 103/234 (44%), Gaps = 58/234 (24%)

Query: 95   PLVAMQGFCNSTKEY-CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            P  A+ G   +  E   P GL G +   GE GAKG+ G+ G RGEKG  G  G PG  G 
Sbjct: 2266 PGQAVVGLPGAKGEKGAPGGLAGDL--VGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGE 2323

Query: 154  PGDEGKRGPKG-----------------------DMGYPGPQGIPGD---EGKRGPKGDM 187
             G +G  GPKG                       D+G PG  G PG     G+ GP+G+M
Sbjct: 2324 DGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEM 2383

Query: 188  GYPGRIGLDGRDGLPGEPGLD---------------------GIPGRNGMDGI--PGKDG 224
            G PG     G  GL G PG +                     G+ G  G  G+  PG  G
Sbjct: 2384 GQPG---PSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRG 2440

Query: 225  LPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              G+ GI G +G  G+   +G+TGP G+RG+ G  G  G+  +   K +S  +L
Sbjct: 2441 ERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVIL 2494



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 83/182 (45%), Gaps = 45/182 (24%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRG-PK- 163
            G QGP G++G IG  GE G+KG+RG+ G       A G  GPPGP G+ G+ GK G P  
Sbjct: 1953 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGL 2012

Query: 164  -GDMGYPGPQGIPGDEGKRGPKGDMGYPGR--------------------------IGLD 196
             G  G  G  G PG+ G+RG KG+ G  GR                           GL 
Sbjct: 2013 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2072

Query: 197  GRDGLPGEPGLDGIPGRN---------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G  G PG  G  G PG N         G+ GI G  G PG  G  G  G  GE+GM GP 
Sbjct: 2073 GEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2132

Query: 248  GN 249
            G 
Sbjct: 2133 GK 2134



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 84/186 (45%), Gaps = 39/186 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            +G  G+ G+ GE G PG    PG  G  G +G R   G  G PG  G+PG  G +G  G 
Sbjct: 2209 QGSPGLPGQVGETGKPGA---PGRDGASGKDGDR---GSPGVPGSPGLPGPVGPKGEPGP 2262

Query: 187  MGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGKDGIPGTNG 236
             G PG+  +GL G  G  G PG     L G PG  G  G+P   G+ G  G+ G PG  G
Sbjct: 2263 TGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2322

Query: 237  TNGEKGMTGPRGNRGKS--------------------GINGVPGTPAICAYKRESCSLLP 276
             +G+KG  GP+G +G                      G+ G+PG P +  +  ++    P
Sbjct: 2323 EDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTG---P 2379

Query: 277  NSETSQ 282
              E  Q
Sbjct: 2380 RGEMGQ 2385



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 101  GFCNSTKEYCPPG--LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            G      E  PPG  L GP G  G  G  G  G+ G +G  G PG VG  G  G PG +G
Sbjct: 2172 GLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDG 2231

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIPGRNGM 216
              G  GD G PG   +PG  G  GP G  G PG  G  G+   GLPG  G  G PG    
Sbjct: 2232 ASGKDGDRGSPG---VPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAG 2288

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            D +    G PG  G  G  G  GEKG  G  G  G  G +G  G P    +K
Sbjct: 2289 DLV----GEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFK 2336



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 75/162 (46%), Gaps = 38/162 (23%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGP 183
            +G  G KG PG  GPPG        G  GP G +         G  GPQG PG  G+ G 
Sbjct: 2168 QGPSGLKGEPGETGPPG-------RGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGE 2220

Query: 184  KGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTN--- 235
             G  G PGR G  G+D   G PG PG  G+PG  G  G PG  G PG+   G+PG     
Sbjct: 2221 TGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEK 2280

Query: 236  --------------GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                          G  G++G+ GPRG +G++G  G PG P 
Sbjct: 2281 GAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2322



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 74/157 (47%), Gaps = 29/157 (18%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGP------- 147
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG   ++GP       
Sbjct: 2597 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2656

Query: 148  --PGPQGIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRGPKGDMGYP 190
              PGP+G  G++G+RG  G  G+PGP G                 G EG +G KG+ G P
Sbjct: 2657 GQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPP 2716

Query: 191  GR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G   +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 2717 GERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAAL 2753



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 93/246 (37%), Gaps = 99/246 (40%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
            P + GP G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD             
Sbjct: 1547 PAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1606

Query: 157  --------------------------EGKRGPKGD------------MGYPGPQGIPGDE 178
                                      +G+ G KGD             G  G +G PG  
Sbjct: 1607 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGL 207
            G  G KGD G PG    DGR+G P                               GEPG 
Sbjct: 1667 GPVGEKGDQGDPGE---DGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGD 1723

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGI 255
             G  G  G  G PG  G PG+ GI G              G  GEKG  GP G  G+SG+
Sbjct: 1724 RGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGL 1783

Query: 256  NGVPGT 261
            +G PG 
Sbjct: 1784 DGKPGA 1789



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 62/120 (51%), Gaps = 29/120 (24%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1250 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGR 1306

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-IGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG+ G RGPKG+ G PG+ IG +G  GLPG
Sbjct: 1307 PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEG-PGLPG 1365



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 70/151 (46%), Gaps = 30/151 (19%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G   S  E  P G  G IG KG+ G  G +G  GE+GE+G P   GP G +G+PG  
Sbjct: 1456 GLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP---GPAGSRGLPGVA 1512

Query: 158  G---------------KRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYPG 191
            G               ++G KG+ G P           GP+G  GD G  GP+G  G  G
Sbjct: 1513 GRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQG 1572

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
              G  G   LPG+PG  G PG  G  G+ G+
Sbjct: 1573 ERGPPGLV-LPGDPGPKGDPGDRGPIGLTGR 1602



 Score = 46.6 bits (109), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 72/189 (38%), Gaps = 66/189 (34%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPG 149
            +G    + E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG
Sbjct: 1946 RGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPG 2005

Query: 150  PQGIPGDEGKRGPKGDMGYPG--------------------------------------- 170
              GIPG  G+ G  G+ G PG                                       
Sbjct: 2006 KPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVD 2065

Query: 171  -----------PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                       P G+ G +G+      +GPKGD G PG  G  G  G  G+ G  G+PG 
Sbjct: 2066 EPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGE 2125

Query: 214  NGMDGIPGK 222
             GM G  GK
Sbjct: 2126 RGMAGPEGK 2134



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 36/71 (50%), Gaps = 12/71 (16%)

Query: 184  KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            KG+ G+PG       DG PG       PGR G  G PG  GL G  G+PG  G  GE+G 
Sbjct: 1295 KGERGFPGA------DGRPGS------PGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGP 1342

Query: 244  TGPRGNRGKSG 254
             GP+G  G  G
Sbjct: 1343 RGPKGEPGAPG 1353



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 42/102 (41%), Gaps = 27/102 (26%)

Query: 183  PKGDMGYPGRIGLDGR---------------------------DGLPGEPGLDGIPGRNG 215
            PKG  G PG +GL G+                            G  G PG DG PG  G
Sbjct: 1252 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPG 1311

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G PG  G PG  G PG  G  G+ G  GPRG +G+ G  G
Sbjct: 1312 RAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPG 1353


>gi|114326515|ref|NP_031759.2| collagen alpha-1(XIX) chain precursor [Mus musculus]
 gi|145558883|sp|Q0VF58.2|COJA1_MOUSE RecName: Full=Collagen alpha-1(XIX) chain; AltName: Full=Collagen
           alpha-1(Y) chain; Flags: Precursor
 gi|148682464|gb|EDL14411.1| procollagen, type XIX, alpha 1 [Mus musculus]
          Length = 1136

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 95/193 (49%), Gaps = 41/193 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  G +G KG  G  GE   KGE+G++G PG++GP                      G 
Sbjct: 461 PGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEPGDPGPPGLLGSPGLKGQ 520

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD----MGYPGRIGLDGRDG-----L 201
           QG  G  G RGP GD+G PG  GIPG +G +G KGD    +G PG  GL G  G     L
Sbjct: 521 QGPAGSMGPRGPPGDVGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDAGPPGISL 580

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGMTGPRGNR 250
           PG+PGLDG PG  G  G  G+ GLPG             GIPG  G+ G  G  G +G R
Sbjct: 581 PGKPGLDGNPGSPGPRGPKGERGLPGLHGSPGDTGPPGVGIPGRTGSQGPAGEPGIQGPR 640

Query: 251 GKSGINGVPGTPA 263
           G  G+ G PG P 
Sbjct: 641 GLPGLPGTPGMPG 653



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 87/178 (48%), Gaps = 45/178 (25%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG---PQGI---- 174
           GE GA G  G KG+ G  G PG VGP G +G PG+   +G KGD G PG   PQGI    
Sbjct: 444 GEHGASGPKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEP 503

Query: 175 -----------PGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                      PG +G++GP G MG    PG +GL         PG  GIPG+ G+ G  
Sbjct: 504 GDPGPPGLLGSPGLKGQQGPAGSMGPRGPPGDVGL---------PGEHGIPGKQGVKGEK 554

Query: 221 GK-------DGLPGKDG--------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G         GLPG  G        +PG  G +G  G  GPRG +G+ G+ G+ G+P 
Sbjct: 555 GDPGGRLGPPGLPGLKGDAGPPGISLPGKPGLDGNPGSPGPRGPKGERGLPGLHGSPG 612



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 68/147 (46%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA-------PGVVGPP 148
           L   QG   S     PPG    +G  GE G  G+ GVKGE+G+ G        PG+ G  
Sbjct: 517 LKGQQGPAGSMGPRGPPGD---VGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDA 573

Query: 149 GPQGI-----------PGDEGKRGPKGDMGYPGPQGIPGDEG-----------KRGPKGD 186
           GP GI           PG  G RGPKG+ G PG  G PGD G            +GP G+
Sbjct: 574 GPPGISLPGKPGLDGNPGSPGPRGPKGERGLPGLHGSPGDTGPPGVGIPGRTGSQGPAGE 633

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG PG+
Sbjct: 634 PGIQGPRGLPGLPGTPGMPGNDGAPGK 660



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 15/141 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G +G  GVKG+RG  G PG+ G       PGP G+PG++G+RGP GD G+PGP+
Sbjct: 854 GAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPGPPGVPGEQGERGPIGDTGFPGPE 913

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                    GP G  G  G+ GL G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 914 ---------GPSGKPGINGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGERGKP 964

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G  G  GP G++G +
Sbjct: 965 GLTGMKGAIGPVGPAGSKGST 985



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 64/138 (46%), Gaps = 42/138 (30%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
           PG  G+PG EG  G KGD G  GP GI G               ++G+RGP GD G+PG 
Sbjct: 853 PGAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPGPPGVPGEQGERGPIGDTGFPGP 912

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMT----- 244
            G  G+ G                  I GKDGLPG  GI   PG  G  GE+G       
Sbjct: 913 EGPSGKPG------------------INGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGD 954

Query: 245 -GPRGNRGKSGINGVPGT 261
            GP+G RGK G+ G+ G 
Sbjct: 955 RGPQGERGKPGLTGMKGA 972



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 93/248 (37%), Gaps = 96/248 (38%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPP------ 148
           G++G IG+KGE GAKG+ G+ G  G+                  KG  G  GPP      
Sbjct: 331 GIKGEIGEKGEPGAKGDSGLDGLNGQDGLKGDSGPQGPPGPKGDKGDMGPPGPPALTGSI 390

Query: 149 ---GPQGIPGDEGKRGPKG-----------------------------------DMGYPG 170
              GPQG PG EG+RG +G                                   + G  G
Sbjct: 391 GIQGPQGPPGKEGQRGRRGKTGPPGNPGPPGPPGPPGLQGLQQPFGGYFNKGTGEHGASG 450

Query: 171 PQG------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL----------------- 207
           P+G      +PG  G  GPKG  G PG     G  G  GEPGL                 
Sbjct: 451 PKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEPGDPGPPG 510

Query: 208 ----------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR-GNRGKSGIN 256
                      G  G  G  G PG  GLPG+ GIPG  G  GEKG  G R G  G  G+ 
Sbjct: 511 LLGSPGLKGQQGPAGSMGPRGPPGDVGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLK 570

Query: 257 GVPGTPAI 264
           G  G P I
Sbjct: 571 GDAGPPGI 578



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 90/241 (37%), Gaps = 83/241 (34%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
           GL G  G  G+ G +G  G+KGE GEKG PG  G  G  G+ G +G +G           
Sbjct: 313 GLDGTPGLPGQKGEQGLEGIKGEIGEKGEPGAKGDSGLDGLNGQDGLKGDSGPQGPPGPK 372

Query: 162 -PKGDMGYP------------GPQGIPGDEGKR--------------------------- 181
             KGDMG P            GPQG PG EG+R                           
Sbjct: 373 GDKGDMGPPGPPALTGSIGIQGPQGPPGKEGQRGRRGKTGPPGNPGPPGPPGPPGLQGLQ 432

Query: 182 -----------------GPKGDM------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
                            GPKG+       G+PG +G  G  G PGEP   G  G  G  G
Sbjct: 433 QPFGGYFNKGTGEHGASGPKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPG 492

Query: 219 IPGKDGLPGKDGI---------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
           + G  G+ G+ G          PG  G  G  G  GPRG  G  G+ G  G P     K 
Sbjct: 493 LLGPQGIKGEPGDPGPPGLLGSPGLKGQQGPAGSMGPRGPPGDVGLPGEHGIPGKQGVKG 552

Query: 270 E 270
           E
Sbjct: 553 E 553


>gi|444730221|gb|ELW70611.1| Collagen alpha-1(XXVII) chain, partial [Tupaia chinensis]
          Length = 1922

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 96/175 (54%), Gaps = 13/175 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----GPPGPQGIPGDEGKRGPKGDMGY 168
            G  GP G  G +GA+GE G+ G  GE+G  G      GPPG +G  GD G RG  GD GY
Sbjct: 1462 GSLGPTGAPGRMGAQGEPGLAGYDGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGY 1521

Query: 169  PGPQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            PG +G+      PG +G+ GPKG  G  G  G  G  GL G PG  G+ GR G++G  G 
Sbjct: 1522 PGQEGVPGLRGKPGQQGRPGPKGKQGKAGAPGRRGIQGLQGLPGPRGVVGRQGLEGAAGP 1581

Query: 223  DGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            DG PG+DG  G  G    +G+ G+ GP G RG  G+ G+PG      +K +S  +
Sbjct: 1582 DGFPGRDGQAGPQGEQGDDGDPGLMGPAGKRGNPGVAGLPGAQGPPGFKGDSGEM 1636



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 83/153 (54%), Gaps = 3/153 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+G  GQ+G  G KG+ G  G  G +G  G+ G PGP+G+ G +G  G  G  G+PG 
Sbjct: 1528 PGLRGKPGQQGRPGPKGKQGKAGAPGRRGIQGLQGLPGPRGVVGRQGLEGAAGPDGFPGR 1587

Query: 172  QGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             G  G +G++G  GD   MG  G+ G  G  GLPG  G  G  G +G  G PG  GL G 
Sbjct: 1588 DGQAGPQGEQGDDGDPGLMGPAGKRGNPGVAGLPGAQGPPGFKGDSGEMGFPGIAGLFGP 1647

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G PG  G  G +G  GP G  GK G+ G  GT
Sbjct: 1648 KGPPGDVGFKGIQGPRGPPGLMGKGGLIGPLGT 1680



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 79/148 (53%), Gaps = 6/148 (4%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+ G+ G  G+ GV G RG+ G  G  GP G QG  G  G+RG +G  G PGP+G+ G +
Sbjct: 1514 GEPGDPGYPGQEGVPGLRGKPGQQGRPGPKGKQGKAGAPGRRGIQGLQGLPGPRGVVGRQ 1573

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  G  G  G+PGR G  G  G  G+ G  G+ G  G  G PG  GLPG  G PG  G +
Sbjct: 1574 GLEGAAGPDGFPGRDGQAGPQGEQGDDGDPGLMGPAGKRGNPGVAGLPGAQGPPGFKGDS 1633

Query: 239  GE------KGMTGPRGNRGKSGINGVPG 260
            GE       G+ GP+G  G  G  G+ G
Sbjct: 1634 GEMGFPGIAGLFGPKGPPGDVGFKGIQG 1661



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 92/191 (48%), Gaps = 39/191 (20%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQK------------GEIGAKGEMGVKGERGEKGAPGVVGP 147
            +GF     E  PPGL G  G+             G++GA G +G  G +G KG  G VG 
Sbjct: 966  RGFPGDFGERGPPGLDGSPGELGLPGPPGVPGLIGDMGALGPIGYPGPKGMKGLTGSVGE 1025

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQ---------GIPGDEGKRGPKGDMGYPGRIGLDGR 198
            PG   + GD+GK G KG +G+PGP          G PGD    GP+G  G PG  GL G 
Sbjct: 1026 PG---LKGDKGKVGDKGSLGFPGPPGPEGFPGDIGPPGDN---GPEGTKGKPGARGLPGP 1079

Query: 199  DGLPGEPG------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G  G  G            L+G PGR G  G PG DGL G+ G PG  G  GE+G+ G 
Sbjct: 1080 RGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGPDGLKGEPGNPGRPGPVGEQGLLGF 1139

Query: 247  RGNRGKSGING 257
             G  G+ GI G
Sbjct: 1140 IGLVGEPGIVG 1150



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 80/173 (46%), Gaps = 11/173 (6%)

Query: 43   DKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGF 102
            D+GD  +   P  P  E VP      +R +  +Q             A  R  +  +QG 
Sbjct: 1509 DRGDRGEPGDPGYPGQEGVP-----GLRGKPGQQGRPGPKGKQGKAGAPGRRGIQGLQGL 1563

Query: 103  CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD 156
                      GL+G  G  G  G  G+ G +GE+G+ G PG++GP      PG  G+PG 
Sbjct: 1564 PGPRGVVGRQGLEGAAGPDGFPGRDGQAGPQGEQGDDGDPGLMGPAGKRGNPGVAGLPGA 1623

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            +G  G KGD G  G  GI G  G +GP GD+G+ G  G  G  GL G+ GL G
Sbjct: 1624 QGPPGFKGDSGEMGFPGIAGLFGPKGPPGDVGFKGIQGPRGPPGLMGKGGLIG 1676



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 83/195 (42%), Gaps = 54/195 (27%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPP---------------------GPQGIPGDEGKRGPK 163
            GA GE G  G+ GE+G PG+ G P                     GP G PG +G +G  
Sbjct: 961  GADGERGFPGDFGERGPPGLDGSPGELGLPGPPGVPGLIGDMGALGPIGYPGPKGMKGLT 1020

Query: 164  GDMGYPGPQGIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLD 208
            G +G P   G+ GD+GK G KG               D+G PG  G +G  G PG  GL 
Sbjct: 1021 GSVGEP---GLKGDKGKVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGTKGKPGARGLP 1077

Query: 209  GIPGRNG---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G  G+ G               ++G PG+ G PG+ G  G  G  G  G  GP G +G  
Sbjct: 1078 GPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGPDGLKGEPGNPGRPGPVGEQGLL 1137

Query: 254  GINGVPGTPAICAYK 268
            G  G+ G P I   K
Sbjct: 1138 GFIGLVGEPGIVGEK 1152



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 80/179 (44%), Gaps = 36/179 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG IGQ+GE G +G+ G  G  G KG  G +G PG QG+ G  G+ G +GD G  GP
Sbjct: 1314 PGEQGLIGQRGEPGLEGDSGPMGPDGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGP 1373

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGL------------------DGRDGLPGEPGLDGIPGR 213
             G+ GD G  GP G+ G  G+ GL                  +G+ G  GE G  G  G 
Sbjct: 1374 DGMKGDRGDPGPDGEHGEKGQEGLTGEDGPPGPPGIPGVRGPEGKPGKQGEKGRTGAKGA 1433

Query: 214  NGMDGIPGK------------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G+                   G  G  G PG  G  GE G+ G  G +G+ G
Sbjct: 1434 KGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGEQGEDG 1492



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 33/175 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G +G  GE G+ G+RGE G  G  GP GP G+ GD G  G  G+ G  G +G PG E
Sbjct: 1306 GDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGMKGDLGPLGTPGEQGLIGQRGEPGLE 1365

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------------PGRNGMDGIPGKDGLP 226
            G  GP G  G  G  G  G DG  GE G +G+            PG  G +G PGK G  
Sbjct: 1366 GDSGPMGPDGMKGDRGDPGPDGEHGEKGQEGLTGEDGPPGPPGIPGVRGPEGKPGKQGEK 1425

Query: 227  GKDGIPGTNGTNGE---------------------KGMTGPRGNRGKSGINGVPG 260
            G+ G  G  G  G+                     +G  GP G  G+ G  G PG
Sbjct: 1426 GRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPG 1480



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 92/230 (40%), Gaps = 59/230 (25%)

Query: 89   NAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP 148
             AY+R+ + A    C  T +    G +G  G  G  G +G+ G +G  G KG PG  G P
Sbjct: 850  GAYTRLGMSARL-SCGLTCQKVVVGYKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLP 908

Query: 149  GPQGIPGDEGKRG----PK---------------------GDMGYPGPQGIPGDEGKRGP 183
            GP G PG +G RG    P+                     G +G PG  G+PG +G+RG 
Sbjct: 909  GPVGDPGPKGSRGVVQLPRVPGRMQQAVAVTGGAQAAGMDGYIGLPGLFGLPGADGERGF 968

Query: 184  KGDMGYPGRIGLDGRDGLP---------------GEPGLDGIPGRNGMDGIPGKDGLPGK 228
             GD G  G  GLDG  G                 G  G  G PG  GM G+ G  G PG 
Sbjct: 969  PGDFGERGPPGLDGSPGELGLPGPPGVPGLIGDMGALGPIGYPGPKGMKGLTGSVGEPGL 1028

Query: 229  DGIPGTNGTNGE------------------KGMTGPRGNRGKSGINGVPG 260
             G  G  G  G                    G  GP G +GK G  G+PG
Sbjct: 1029 KGDKGKVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGTKGKPGARGLPG 1078



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 90/208 (43%), Gaps = 48/208 (23%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKG---------------EIGAKGEMGVKGERGEKGAP 142
             M+G   S  E    G +G +G KG               +IG  G+ G +G +G+ GA 
Sbjct: 1015 GMKGLTGSVGEPGLKGDKGKVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGTKGKPGAR 1074

Query: 143  GVVGPPGPQGIPGDE------------GKRGPKGDMGYPGPQGI---PGDEGKRGPKGDM 187
            G+ GP G  G  GDE            G+ G KG  G PGP G+   PG+ G+ GP G+ 
Sbjct: 1075 GLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGPDGLKGEPGNPGRPGPVGEQ 1134

Query: 188  GYPGRIGLDGRDGLPGEP------------------GLDGIPGRNGMDGIPGKDGLPGKD 229
            G  G IGL G  G+ GE                   G  G+PG  G  G PG  G PG  
Sbjct: 1135 GLLGFIGLVGEPGIVGEKGDRGVMGPPGPPGPKGSMGHPGMPGGVGNSGEPGPLGPPGSR 1194

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG  G  G +G  GP G  G+ G  G
Sbjct: 1195 GAPGMRGAKGRRGPRGPDGPAGEQGSKG 1222



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 76/167 (45%), Gaps = 36/167 (21%)

Query: 111  PPGLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVGPPG 149
            PPG  GP G KG+ GA+G  G                     ++G+ G KG PG  GP G
Sbjct: 1058 PPGDNGPEGTKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGPDG 1117

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIG 194
             +G PG+ G+ GP G+ G  G  G+ G+ G  G KGD               MG+PG  G
Sbjct: 1118 LKGEPGNPGRPGPVGEQGLLGFIGLVGEPGIVGEKGDRGVMGPPGPPGPKGSMGHPGMPG 1177

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
              G  G PG  G  G  G  GM G  G+ G  G DG  G  G+ G+K
Sbjct: 1178 GVGNSGEPGPLGPPGSRGAPGMRGAKGRRGPRGPDGPAGEQGSKGQK 1224


>gi|4502961|ref|NP_000085.1| collagen alpha-1(VII) chain precursor [Homo sapiens]
 gi|1345650|sp|Q02388.2|CO7A1_HUMAN RecName: Full=Collagen alpha-1(VII) chain; AltName: Full=Long-chain
            collagen; Short=LC collagen; Flags: Precursor
 gi|987125|gb|AAA75438.1| alpha-1 type VII collagen [Homo sapiens]
          Length = 2944

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/192 (40%), Positives = 101/192 (52%), Gaps = 28/192 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD 156
             ++G      +  P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD
Sbjct: 2478 GIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGD 2537

Query: 157  EGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G+RGP+G  G  GP+   G PGD+G +G  GD G  G  GL G  G  G+P        
Sbjct: 2538 MGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQP-------- 2589

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV--------------- 258
             G  GIPG  G PGKDG+PG  G  G+ G  GPRG +G+ G+ G                
Sbjct: 2590 -GAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGP 2648

Query: 259  PGTPAICAYKRE 270
            PG P +  +K E
Sbjct: 2649 PGRPGLAGHKGE 2660



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 94/209 (44%), Gaps = 61/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                    PG   
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGARE 1717

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGL 195
            +G PGD G+ GP+G  G PG  G PG+ G                RGP G+ G  G  GL
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------KDGI 231
            DGR GL G+PG  G  G NG  G    PG+DGLPG                     +DG 
Sbjct: 1778 DGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGK 1837

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG NG NGE G  G  G +G+ G +G  G
Sbjct: 1838 PGLNGKNGEPGDPGEDGRKGEKGDSGASG 1866



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 106/259 (40%), Gaps = 37/259 (14%)

Query: 25   PIISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNP 84
            P  +K ++  R  R +D DKG   DN  P     +  P D         +          
Sbjct: 2531 PRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPG 2590

Query: 85   WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
               +      P     G      E    G  GP G KGE G KG  G+ GE+G+KG  G 
Sbjct: 2591 AAGIPGDPGSP--GKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAG- 2647

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                 P G PG  G +G  G+ G PG  G PG EG  GPKGD G+ G+ G  G  G  GE
Sbjct: 2648 -----PPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGE 2702

Query: 205  ---PGLDGIPGRNGMD---------------------GIPGKDGLPGKD-----GIPGTN 235
               PG+ G PG +G D                     G  G+ G PG+      G+PG  
Sbjct: 2703 RGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAP 2762

Query: 236  GTNGEKGMTGPRGNRGKSG 254
            G  GE+G  GP G RG+ G
Sbjct: 2763 GERGEQGRPGPAGPRGEKG 2781



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 79/173 (45%), Gaps = 34/173 (19%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
               K  C  GL G  G KGE G  G  G+ G +GE G PGV   PG  G PG EG  GPK
Sbjct: 2628 RGVKGAC--GLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGV---PGQSGAPGKEGLIGPK 2682

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--------------- 208
            GD G+         +G+ GPKGD G  G  G  G  G PG  G D               
Sbjct: 2683 GDRGF---------DGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPR 2733

Query: 209  ---GIPGRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
               G+ G+ G  G PG+   G PG  G PG  G  G  G  GPRG +G++ + 
Sbjct: 2734 GPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAALT 2786



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 88/190 (46%), Gaps = 46/190 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++G+P         G VGP   PGP G PG    
Sbjct: 2244 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2303

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLD---GI 210
            G  G KG+ G PG  G+ GD  G+ G KGD G P   G  G  GR G PG+PG D   G 
Sbjct: 2304 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGA 2361

Query: 211  PGRNGMD-----------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            PG  G                         G+PG  G PG  G PG  G  GE G  GP 
Sbjct: 2362 PGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPS 2421

Query: 248  GNRGKSGING 257
            G RG +G  G
Sbjct: 2422 GERGLAGPPG 2431



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 78/141 (55%), Gaps = 12/141 (8%)

Query: 133  KGERG--EKGAPGVVGPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPK 184
            KGE+G  E GAPG+   PG  G PG++G RGP      KGD G+PGP G  G++G+RGP 
Sbjct: 1444 KGEKGDSEDGAPGL---PGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP 1500

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  
Sbjct: 1501 GPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDV 1559

Query: 245  GPRGNRGKSGINGVPGTPAIC 265
            GP G RG +G+ G  G P + 
Sbjct: 1560 GPAGPRGATGVQGERGPPGLV 1580



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 89/199 (44%), Gaps = 60/199 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------------------- 143
            GL GP G+KGE G  GE G  GE G+KGAPG                             
Sbjct: 2333 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLG 2392

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKR------------------- 181
            + G PG  G+ G  G+ GP+G+MG PGP   +G+ G  G+                    
Sbjct: 2393 LPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPG 2452

Query: 182  --GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
              G KGD G PG +GL G  G  GEPG+       G DG PG++G  G  G PG+ G  G
Sbjct: 2453 ASGLKGDKGDPG-VGLPGPRGERGEPGI------RGEDGRPGQEGPRGLTGPPGSRGERG 2505

Query: 240  EKGMTGPRGNRGKSGINGV 258
            EKG  G  G +G  G + V
Sbjct: 2506 EKGDVGSAGLKGDKGDSAV 2524



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 93/255 (36%), Gaps = 106/255 (41%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G+ G  G +GE G KGERGE+G                           PG+ 
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG  G +GPKGD G PG +G  G+ G RG  G+ G PG  G+ G +
Sbjct: 2105 GEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2164

Query: 200  ---------------------------------------GLPGEPGLDGIPGRN------ 214
                                                   GL GEPG  G PGR       
Sbjct: 2165 GKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTG 2224

Query: 215  -----------------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                                         G  G PG+DG  GKDG  G+ G  G  G+ G
Sbjct: 2225 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPG 2284

Query: 246  PRGNRGKSGINGVPG 260
            P G +G+ G  G PG
Sbjct: 2285 PVGPKGEPGPTGAPG 2299



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 83/182 (45%), Gaps = 45/182 (24%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRG-PK- 163
            G QGP G++G IG  GE G+KG+RG+ G       A G  GPPGP G+ G+ GK G P  
Sbjct: 1985 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGL 2044

Query: 164  -GDMGYPGPQGIPGDEGKRGPKGDMGYPGR--------------------------IGLD 196
             G  G  G  G PG+ G+RG KG+ G  GR                           GL 
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104

Query: 197  GRDGLPGEPGLDGIPGRN---------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G  G PG  G  G PG N         G+ GI G  G PG  G  G  G  GE+GM GP 
Sbjct: 2105 GEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2164

Query: 248  GN 249
            G 
Sbjct: 2165 GK 2166



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 101/240 (42%), Gaps = 70/240 (29%)

Query: 95   PLVAMQGFCNSTKEY-CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            P  A+ G   +  E   P GL G +   GE GAKG+ G+ G RGEKG  G  G PG  G 
Sbjct: 2298 PGQAVVGLPGAKGEKGAPGGLAGDL--VGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGE 2355

Query: 154  PGDEGKRGPKG-----------------------DMGYPGPQGIPGD---EGKRGPKGDM 187
             G +G  GPKG                       D+G PG  G PG     G+ GP+G+M
Sbjct: 2356 DGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEM 2415

Query: 188  GYPGRIGLDGRDGLPGEPGLD--------------------------------GIPGRNG 215
            G PG     G  GL G PG +                                G+PG  G
Sbjct: 2416 GQPG---PSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRG 2472

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              G P   G+ G+DG PG  G    +G+TGP G+RG+ G  G  G+  +   K +S  +L
Sbjct: 2473 ERGEP---GIRGEDGRPGQEGP---RGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVIL 2526



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 84/186 (45%), Gaps = 39/186 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            +G  G+ G+ GE G PG    PG  G  G +G R   G  G PG  G+PG  G +G  G 
Sbjct: 2241 QGSPGLPGQVGETGKPGA---PGRDGASGKDGDR---GSPGVPGSPGLPGPVGPKGEPGP 2294

Query: 187  MGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGKDGIPGTNG 236
             G PG+  +GL G  G  G PG     L G PG  G  G+P   G+ G  G+ G PG  G
Sbjct: 2295 TGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2354

Query: 237  TNGEKGMTGPRGNRGKS--------------------GINGVPGTPAICAYKRESCSLLP 276
             +G+KG  GP+G +G                      G+ G+PG P +  +  ++    P
Sbjct: 2355 EDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTG---P 2411

Query: 277  NSETSQ 282
              E  Q
Sbjct: 2412 RGEMGQ 2417



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 94/238 (39%), Gaps = 87/238 (36%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------ 148
            G      E   PG  G  G+KG+ GA G  G  G +GE+GAPG++GP             
Sbjct: 1839 GLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPP 1898

Query: 149  -----------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG------------------ 179
                       GP+G   D G+ G KG+ G PG +G+ G+ G                  
Sbjct: 1899 GQGFPGVPGGTGPKG---DRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASA 1955

Query: 180  ---------------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------- 208
                                 +RGPKGD G  G  G +G  G PGE GL           
Sbjct: 1956 LREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQG 2015

Query: 209  ---------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                     G PG +G+ G PGK G+P   G+PG  G  GE G  G RG RG+ G  G
Sbjct: 2016 PPGLALGERGPPGPSGLAGEPGKPGIP---GLPGRAGGVGEAGRPGERGERGEKGERG 2070



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 101  GFCNSTKEYCPPG--LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            G      E  PPG  L GP G  G  G  G  G+ G +G  G PG VG  G  G PG +G
Sbjct: 2204 GLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDG 2263

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIPGRNGM 216
              G  GD G PG   +PG  G  GP G  G PG  G  G+   GLPG  G  G PG    
Sbjct: 2264 ASGKDGDRGSPG---VPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAG 2320

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            D +    G PG  G  G  G  GEKG  G  G  G  G +G  G P    +K
Sbjct: 2321 DLV----GEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFK 2368



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 75/162 (46%), Gaps = 38/162 (23%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGP 183
            +G  G KG PG  GPPG        G  GP G +         G  GPQG PG  G+ G 
Sbjct: 2200 QGPSGLKGEPGETGPPG-------RGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGE 2252

Query: 184  KGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTN--- 235
             G  G PGR G  G+D   G PG PG  G+PG  G  G PG  G PG+   G+PG     
Sbjct: 2253 TGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEK 2312

Query: 236  --------------GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                          G  G++G+ GPRG +G++G  G PG P 
Sbjct: 2313 GAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2354



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 74/157 (47%), Gaps = 29/157 (18%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGP------- 147
             ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG   ++GP       
Sbjct: 2629 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2688

Query: 148  --PGPQGIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRGPKGDMGYP 190
              PGP+G  G++G+RG  G  G+PGP G                 G EG +G KG+ G P
Sbjct: 2689 GQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPP 2748

Query: 191  GR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G   +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 2749 GERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAAL 2785



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 93/246 (37%), Gaps = 99/246 (40%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
            P + GP G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD             
Sbjct: 1547 PAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1606

Query: 157  --------------------------EGKRGPKGD------------MGYPGPQGIPGDE 178
                                      +G+ G KGD             G  G +G PG  
Sbjct: 1607 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGL 207
            G  G KGD G PG    DGR+G P                               GEPG 
Sbjct: 1667 GPVGEKGDQGDPGE---DGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGD 1723

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGI 255
             G  G  G  G PG  G PG+ GI G              G  GEKG  GP G  G+SG+
Sbjct: 1724 RGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGL 1783

Query: 256  NGVPGT 261
            +G PG 
Sbjct: 1784 DGKPGA 1789



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 62/120 (51%), Gaps = 29/120 (24%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1250 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGR 1306

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-IGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG+ G RGPKG+ G PG+ IG +G  GLPG
Sbjct: 1307 PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEG-PGLPG 1365



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 87/239 (36%), Gaps = 95/239 (39%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------------------- 144
            GP G +GE G+KGE G+ GERG +G PG                                
Sbjct: 1910 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 1969

Query: 145  -----------------VGPP---GPQGIPGDEGKRGPK-------------GDMGYPGP 171
                              GPP   GP G PG+ G +G +             G+ G PGP
Sbjct: 1970 FLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2029

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------ 219
             G+ G+ GK    G  G PGR G  G  G PGE G  G  G  G  G             
Sbjct: 2030 SGLAGEPGK---PGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGP 2086

Query: 220  ------------PGKDGLPGKDGIPGTNGTNGEKGM---TGPRGNRGKSGINGVPGTPA 263
                        PG  GL G+ G PG  G  GE G     GP+G+RG  GI G  G P 
Sbjct: 2087 PGPPGPKVSVDEPGP-GLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPG 2144



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 70/151 (46%), Gaps = 30/151 (19%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G   S  E  P G  G IG KG+ G  G +G  GE+GE+G P   GP G +G+PG  
Sbjct: 1456 GLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP---GPAGSRGLPGVA 1512

Query: 158  G---------------KRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYPG 191
            G               ++G KG+ G P           GP+G  GD G  GP+G  G  G
Sbjct: 1513 GRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQG 1572

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
              G  G   LPG+PG  G PG  G  G+ G+
Sbjct: 1573 ERGPPGLV-LPGDPGPKGDPGDRGPIGLTGR 1602



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 91/209 (43%), Gaps = 47/209 (22%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++GF         PG++GP G+KG+   +G  G+ G  G  G PG  GP GP G     
Sbjct: 1746 GIEGFRGPPGPQGDPGVRGPAGEKGD---RGPPGLDGRSGLDGKPGAAGPSGPNGA---- 1798

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLD 208
                  G  G PG  G+PG  G++G  G  G P         G+ GL+G++G PG+PG D
Sbjct: 1799 -----AGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGED 1853

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG-----------------------EKGMTG 245
               GR G  G  G  G  G+DG  G  G  G                         G TG
Sbjct: 1854 ---GRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTG 1910

Query: 246  PRGNRGKSGINGVPGTPAICAYKRESCSL 274
            P+G+RG++G  G  G P     + E  S+
Sbjct: 1911 PKGDRGETGSKGEQGLPGERGLRGEPGSV 1939



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 76/183 (41%), Gaps = 63/183 (34%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP--------QGI--------- 153
            P G +G  G KGE G  GE G++GE      PG V    P         GI         
Sbjct: 1911 PKGDRGETGSKGEQGLPGERGLRGE------PGSV----PNVDRLLETAGIKASALREIV 1960

Query: 154  -----------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD------ 196
                       P  E +RGPKGD G    QG PG EG       +G+PG  GL       
Sbjct: 1961 ETWDESSGSFLPVPERRRGPKGDSGE---QGPPGKEGP------IGFPGERGLKGDRGDP 2011

Query: 197  ----------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                      G  G PG  GL G PG+ G+ G+PG+ G  G+ G PG  G  GEKG  G 
Sbjct: 2012 GPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGE 2071

Query: 247  RGN 249
            +G 
Sbjct: 2072 QGR 2074



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 73/168 (43%), Gaps = 45/168 (26%)

Query: 112  PGLQGPIGQKGEIGAK------GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL G  G++G  G +      G+ GV+G  GEK                  G RGP G 
Sbjct: 1736 PGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEK------------------GDRGPPGL 1777

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------L 207
             G  G  G PG  G  GP G     G+ G  GRDGLPG  G                   
Sbjct: 1778 DGRSGLDGKPGAAGPSGPNGAA---GKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGE 1834

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            DG PG NG +G PG  G  G+ G  G +G +G +G  GP+G RG  GI
Sbjct: 1835 DGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGI 1882



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 72/189 (38%), Gaps = 66/189 (34%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPG 149
            +G    + E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG
Sbjct: 1978 RGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPG 2037

Query: 150  PQGIPGDEGKRGPKGDMGYPG--------------------------------------- 170
              GIPG  G+ G  G+ G PG                                       
Sbjct: 2038 KPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVD 2097

Query: 171  -----------PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                       P G+ G +G+      +GPKGD G PG  G  G  G  G+ G  G+PG 
Sbjct: 2098 EPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGE 2157

Query: 214  NGMDGIPGK 222
             GM G  GK
Sbjct: 2158 RGMAGPEGK 2166



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 36/71 (50%), Gaps = 12/71 (16%)

Query: 184  KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            KG+ G+PG       DG PG       PGR G  G PG  GL G  G+PG  G  GE+G 
Sbjct: 1295 KGERGFPGA------DGRPGS------PGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGP 1342

Query: 244  TGPRGNRGKSG 254
             GP+G  G  G
Sbjct: 1343 RGPKGEPGAPG 1353



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 42/102 (41%), Gaps = 27/102 (26%)

Query: 183  PKGDMGYPGRIGLDGR---------------------------DGLPGEPGLDGIPGRNG 215
            PKG  G PG +GL G+                            G  G PG DG PG  G
Sbjct: 1252 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPG 1311

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G PG  G PG  G PG  G  G+ G  GPRG +G+ G  G
Sbjct: 1312 RAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPG 1353


>gi|6753480|ref|NP_034055.1| collagen alpha-1(X) chain precursor [Mus musculus]
 gi|1168725|sp|Q05306.1|COAA1_MOUSE RecName: Full=Collagen alpha-1(X) chain; Flags: Precursor
 gi|50481|emb|CAA47763.1| alpha 1 (X) collagen chain [Mus musculus]
 gi|148672943|gb|EDL04890.1| procollagen, type X, alpha 1 [Mus musculus]
 gi|162317770|gb|AAI56193.1| Collagen, type X, alpha 1 [synthetic construct]
 gi|162318716|gb|AAI56931.1| Collagen, type X, alpha 1 [synthetic construct]
          Length = 680

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 14/156 (8%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP-----QGIPGDEGKRGPKGDMGYPGPQ 172
           IG+ G IG+ G+ G+ GE+G  GAPG+ GPPG      QG+PG  G+RGP          
Sbjct: 263 IGKPGAIGSPGQPGIPGEKGHPGAPGIAGPPGAPGFGKQGLPGLRGQRGP---------A 313

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG  G +G +G  G+PG  GL G  G  G  G  GIPG +G+ G  G+ GL G  G P
Sbjct: 314 GLPGAPGAKGERGPAGHPGEPGLPGSPGNMGPQGPKGIPGNHGIPGAKGEIGLVGPAGPP 373

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G  G+ G  G  G+ G+NG  G P +   K
Sbjct: 374 GARGARGPPGLDGKTGYPGEPGLNGPKGNPGLPGQK 409



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 81/144 (56%), Gaps = 6/144 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GP G  G  GAKGE G  G  GE G   +PG +GP GP+GIPG+ G  G KG++G  
Sbjct: 308 GQRGPAGLPGAPGAKGERGPAGHPGEPGLPGSPGNMGPQGPKGIPGNHGIPGAKGEIGLV 367

Query: 170 GPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GP G PG  G RGP G     GYPG  GL+G  G PG PG  G PG  G  G+ G  G  
Sbjct: 368 GPAGPPGARGARGPPGLDGKTGYPGEPGLNGPKGNPGLPGQKGDPGVGGTPGLRGPVGPV 427

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G+PG NG  G +G  G  G R
Sbjct: 428 GAKGVPGHNGEAGPRGEPGIPGTR 451



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 60/115 (52%), Gaps = 6/115 (5%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
           G   S     P G +G  G  G  GAKGE+G+ G  G  GA G  GPPG     G PG+ 
Sbjct: 335 GLPGSPGNMGPQGPKGIPGNHGIPGAKGEIGLVGPAGPPGARGARGPPGLDGKTGYPGEP 394

Query: 158 GKRGPKGDMGYPGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
           G  GPKG+ G PG +G P   G  G RGP G +G  G  G +G  G  GEPG+ G
Sbjct: 395 GLNGPKGNPGLPGQKGDPGVGGTPGLRGPVGPVGAKGVPGHNGEAGPRGEPGIPG 449


>gi|363738634|ref|XP_425157.3| PREDICTED: collagen alpha-1(VII) chain-like [Gallus gallus]
          Length = 2880

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 93/171 (54%), Gaps = 6/171 (3%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L   +G      E   PG +G  G+ GE G+ G  G +G  G+KG  GV G PG  G+PG
Sbjct: 2431 LKGTEGDKGEKGEQGMPGEKGARGEPGERGSAGFPGARGPGGQKGEVGVPGEPGEPGLPG 2490

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKG------DMGYPGRIGLDGRDGLPGEPGLDG 209
             +G  G +G+ G  GP G+ G +G+RG KG      D G  G  GL GR GLPG  G  G
Sbjct: 2491 RDGIAGARGEKGDIGPLGLRGPKGERGMKGACGLDGDKGEKGEPGLPGRSGLPGRKGEPG 2550

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G +G  G+PGK+GL G  G  G +G  G KG  G +G+RG  G+ G PG
Sbjct: 2551 ELGLSGAPGVPGKEGLMGPKGDRGFDGQQGAKGDQGEKGDRGAPGMIGTPG 2601



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 103/199 (51%), Gaps = 25/199 (12%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPG-------- 149
            G   +  E   PG +G  G+ G  G +G MG+   +GERG+KG  G VGP G        
Sbjct: 2354 GLPGARGERGDPGPRGEDGRPGLAGDRGPMGLPGNRGERGDKGDVGAVGPKGDKGDTVVV 2413

Query: 150  --------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGR 198
                     +G PGD G +G +GD G  G QG+PG++G RG    +G  G+PG  G  G+
Sbjct: 2414 EGPAGARGSKGEPGDRGLKGTEGDKGEKGEQGMPGEKGARGEPGERGSAGFPGARGPGGQ 2473

Query: 199  DG---LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G   +PGEPG  G+PGR+G+ G  G+ G  G  G+ G  G  G KG  G  G++G+ G 
Sbjct: 2474 KGEVGVPGEPGEPGLPGRDGIAGARGEKGDIGPLGLRGPKGERGMKGACGLDGDKGEKGE 2533

Query: 256  NGVPGTPAICAYKRESCSL 274
             G+PG   +   K E   L
Sbjct: 2534 PGLPGRSGLPGRKGEPGEL 2552



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/156 (43%), Positives = 84/156 (53%), Gaps = 10/156 (6%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD----EGK 180
            GA+GE G  G RGE G PG+ G  GP G+PG+ G+RG KGD+G  GP+G  GD    EG 
Sbjct: 2357 GARGERGDPGPRGEDGRPGLAGDRGPMGLPGNRGERGDKGDVGAVGPKGDKGDTVVVEGP 2416

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
             G +G  G PG  GL G +G  GE G  G+PG  G  G PG+ G     G PG  G  G+
Sbjct: 2417 AGARGSKGEPGDRGLKGTEGDKGEKGEQGMPGEKGARGEPGERG---SAGFPGARGPGGQ 2473

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            KG  G  G  G+    G+PG   I   + E   + P
Sbjct: 2474 KGEVGVPGEPGEP---GLPGRDGIAGARGEKGDIGP 2506



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 99/204 (48%), Gaps = 55/204 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
            G  G +G+ G+ G +G  G +GE+GE GAPG  GP G +G+PG  G RG           
Sbjct: 1387 GAPGELGETGQKGDRGAPGPEGEKGETGAPGRPGPSGREGVPGPAGPRGEKVREEQGLGM 1446

Query: 162  ------------PKGDMGYPG--------------PQGIPGDEGKRG---------PKGD 186
                        P+GD+G PG              P G  G++G+RG         PKGD
Sbjct: 1447 GLWGGDGTDPMCPQGDVGAPGEPGQPGVPGLSIPGPAGPKGEQGERGITGLTGRSGPKGD 1506

Query: 187  MGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGK------DGIPGTNGT 237
             G PG  G  GR G PG+PG    +G  G  G +G PG+ G+PGK       G+PG  G 
Sbjct: 1507 AGEPGEKGEPGRVGAPGQPGQRGKEGERGEKGDEGTPGEAGVPGKPGDRGPRGLPGYRGP 1566

Query: 238  NGEKGMTGPRGNRGKSGINGVPGT 261
             GEKG  G  G  G++GI G PGT
Sbjct: 1567 PGEKGELGDPGPEGRNGIPGAPGT 1590



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 93/176 (52%), Gaps = 15/176 (8%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V ++G   +      PG +G  G +G+ G KGE G+ GE+G +G PG  G     G PG 
Sbjct: 2411 VVVEGPAGARGSKGEPGDRGLKGTEGDKGEKGEQGMPGEKGARGEPGERGS---AGFPGA 2467

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G  G KG++G PG  G PG  G+      RG KGD+G  G  G  G  G+ G  GLDG 
Sbjct: 2468 RGPGGQKGEVGVPGEPGEPGLPGRDGIAGARGEKGDIGPLGLRGPKGERGMKGACGLDGD 2527

Query: 211  PGRNGMDGIPGKDGLPGKDGIP------GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G+PG+ GLPG+ G P      G  G  G++G+ GP+G+RG  G  G  G
Sbjct: 2528 KGEKGEPGLPGRSGLPGRKGEPGELGLSGAPGVPGKEGLMGPKGDRGFDGQQGAKG 2583



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 93/190 (48%), Gaps = 38/190 (20%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G      +  P GL+GP   KGE G KG  G+ G++GEKG PG+   PG  G+P   
Sbjct: 2493 GIAGARGEKGDIGPLGLRGP---KGERGMKGACGLDGDKGEKGEPGL---PGRSGLP--- 2543

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPG-- 212
            G++G  G++G  G  G+PG EG  GPKGD G+ G+ G  G  G  G+   PG+ G PG  
Sbjct: 2544 GRKGEPGELGLSGAPGVPGKEGLMGPKGDRGFDGQQGAKGDQGEKGDRGAPGMIGTPGPR 2603

Query: 213  -------------------RNGMDGIPGKDGLPGKD-----GIPGTNGTNGEKGMTGPRG 248
                                 GM G  G+ G PG+      G+PG  G  GE+G  G  G
Sbjct: 2604 GSDGAPGPPGPPGSVGPRGPEGMQGQKGERGPPGQAVMGARGVPGIPGERGEQGSPGAEG 2663

Query: 249  NRGKSGINGV 258
             RG+ G  G+
Sbjct: 2664 LRGEKGDPGM 2673



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 82/146 (56%), Gaps = 11/146 (7%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKG-----EMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            + T   CP G  G  G+ G+ G  G       G KGE+GE+G  G+ G  GP+G  G+ G
Sbjct: 1452 DGTDPMCPQGDVGAPGEPGQPGVPGLSIPGPAGPKGEQGERGITGLTGRSGPKGDAGEPG 1511

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            ++G  G +G PG  G  G EG+RG KGD G PG  G+ G+   PG+ G  G+PG  G  G
Sbjct: 1512 EKGEPGRVGAPGQPGQRGKEGERGEKGDEGTPGEAGVPGK---PGDRGPRGLPGYRGPPG 1568

Query: 219  IPGKDGLP---GKDGIPGTNGTNGEK 241
              G+ G P   G++GIPG  GT G++
Sbjct: 1569 EKGELGDPGPEGRNGIPGAPGTKGDR 1594



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 56/214 (26%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            +P +++ G      E    G+ G  G+ G  G  GE G KGE G  GAPG    PG +  
Sbjct: 1474 VPGLSIPGPAGPKGEQGERGITGLTGRSGPKGDAGEPGEKGEPGRVGAPGQ---PGQR-- 1528

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGL------DGRDGLPGE 204
             G EG+RG KGD G PG  G+PG  G RGP+G  GY   PG  G       +GR+G+PG 
Sbjct: 1529 -GKEGERGEKGDEGTPGEAGVPGKPGDRGPRGLPGYRGPPGEKGELGDPGPEGRNGIPGA 1587

Query: 205  P-----------------------------------------GLDGIPGRNGMDGIPGKD 223
            P                                         G  G  G +G  G+PG  
Sbjct: 1588 PGTKGDRGEPGPPGLPGRAVDVGLGGAGEKGEKGDAGDPGEDGAKGAKGESGPPGLPGVR 1647

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G+ G  G PG  G  G++G++G +G RG  G++G
Sbjct: 1648 GIEGPRGPPGARGDPGDRGLSGEKGERGPPGLDG 1681



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 82/169 (48%), Gaps = 36/169 (21%)

Query: 129  EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
            + G  GE G KGA G  GPPG  G+ G EG RGP G  G PG +G+ G++G+RGP     
Sbjct: 1622 DAGDPGEDGAKGAKGESGPPGLPGVRGIEGPRGPPGARGDPGDRGLSGEKGERGPP---- 1677

Query: 189  YPGRIGLDGRD------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGK-------- 228
                 GLDGR+            GL G+PG  G PGR+G+ G+ G+ G PG         
Sbjct: 1678 -----GLDGRNGLEGKPGPPGPAGLRGDPGKQGDPGRDGLPGLRGEQGPPGTIGPLGPPG 1732

Query: 229  -------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                   DG PG NG NGE G  G  G +G  G  G PG       K E
Sbjct: 1733 IPGKPGDDGKPGLNGKNGEDGTPGEDGRKGDKGDAGAPGRDGHSGAKGE 1781



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 80/162 (49%), Gaps = 30/162 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
            PG  G  G KGE G  G  GV+G  G +G PG  G PG +G+ G++G+RGP G  G    
Sbjct: 1626 PGEDGAKGAKGESGPPGLPGVRGIEGPRGPPGARGDPGDRGLSGEKGERGPPGLDGRNGL 1685

Query: 169  ---------------PGPQGIPGDEGKRGPKGDMGYPGRIGL------------DGRDGL 201
                           PG QG PG +G  G +G+ G PG IG             DG+ GL
Sbjct: 1686 EGKPGPPGPAGLRGDPGKQGDPGRDGLPGLRGEQGPPGTIGPLGPPGIPGKPGDDGKPGL 1745

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G+ G DG PG +G  G  G  G PG+DG  G  G  G++GM
Sbjct: 1746 NGKNGEDGTPGEDGRKGDKGDAGAPGRDGHSGAKGEQGDRGM 1787



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 86/188 (45%), Gaps = 49/188 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-------------------PQG 152
            PG +GP G++G +G  GE G KG++G++GAPG  GP G                     G
Sbjct: 1879 PGERGPPGREGSLGFPGERGPKGDKGDQGAPGPQGPTGRAVGERGLEGPPGQPGEPGKPG 1938

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------------MGYPG 191
            IPG  G+ G  G+ G PG +G  G++G RG +G                      MG+PG
Sbjct: 1939 IPGVPGRAGELGEAGRPGEKGDRGEKGDRGEQGRDGLPGPPGPPGPKADAMEGSLMGFPG 1998

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNG---------MDGIPGKDGLPGKDGIPGTNGTNGEKG 242
              G  G  G+ GEPG +G  G  G           G PG+ G  G  G+PG  G  G +G
Sbjct: 1999 ERGPPGLKGVKGEPGAEGERGPKGDKGEGGSRGERGEPGEKGRDGSPGLPGERGLAGPEG 2058

Query: 243  MTGPRGNR 250
              GP+G R
Sbjct: 2059 KPGPQGFR 2066



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 81/187 (43%), Gaps = 52/187 (27%)

Query: 132  VKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPGPQG--------------- 173
            ++G++G +G PG  GPPG +G    PG+ G +G KGD G PGPQG               
Sbjct: 1869 LRGQKGSRGEPGERGPPGREGSLGFPGERGPKGDKGDQGAPGPQGPTGRAVGERGLEGPP 1928

Query: 174  ----------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG----------- 212
                      IPG  G+ G  G+ G PG  G  G  G  GE G DG+PG           
Sbjct: 1929 GQPGEPGKPGIPGVPGRAGELGEAGRPGEKGDRGEKGDRGEQGRDGLPGPPGPPGPKADA 1988

Query: 213  -RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR------------GNRGKSGINGVP 259
                + G PG+ G PG  G+ G  G  GE+G  G +            G +G+ G  G+P
Sbjct: 1989 MEGSLMGFPGERGPPGLKGVKGEPGAEGERGPKGDKGEGGSRGERGEPGEKGRDGSPGLP 2048

Query: 260  GTPAICA 266
            G   +  
Sbjct: 2049 GERGLAG 2055



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 87/211 (41%), Gaps = 75/211 (35%)

Query: 128  GEMGVKGE--------------------------------RGEKGAPGVVGPPGPQ---G 152
            G  G KGE                                +GE+GAPG +G  G +   G
Sbjct: 1343 GTPGPKGEKGDGEEGFPGPPGRPGDPGDRGPRGPPGEQGRKGERGAPGELGETGQKGDRG 1402

Query: 153  IPGDEGKRGPKGDMGYPGP---QGIPGDEGKRG-----------------------PKGD 186
             PG EG++G  G  G PGP   +G+PG  G RG                       P+GD
Sbjct: 1403 APGPEGEKGETGAPGRPGPSGREGVPGPAGPRGEKVREEQGLGMGLWGGDGTDPMCPQGD 1462

Query: 187  MGYPGRIGLDGRDGLP-----------GEPGLDGIPGRNGMD---GIPGKDGLPGKDGIP 232
            +G PG  G  G  GL            GE G+ G+ GR+G     G PG+ G PG+ G P
Sbjct: 1463 VGAPGEPGQPGVPGLSIPGPAGPKGEQGERGITGLTGRSGPKGDAGEPGEKGEPGRVGAP 1522

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G++G  G +G+ G  G  GVPG P 
Sbjct: 1523 GQPGQRGKEGERGEKGDEGTPGEAGVPGKPG 1553



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 98/261 (37%), Gaps = 110/261 (42%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA------------------------PGVVGP 147
            PG  G +G+ G  G KG+ G KG+RGE+G                         PG  GP
Sbjct: 1943 PGRAGELGEAGRPGEKGDRGEKGDRGEQGRDGLPGPPGPPGPKADAMEGSLMGFPGERGP 2002

Query: 148  PGPQGI---PGDEGKRGPKGDM---------------------GYPGPQGIPGDEGKRGP 183
            PG +G+   PG EG+RGPKGD                      G PG +G+ G EGK GP
Sbjct: 2003 PGLKGVKGEPGAEGERGPKGDKGEGGSRGERGEPGEKGRDGSPGLPGERGLAGPEGKPGP 2062

Query: 184  KG------------DMGYPGRI---------------------GLDGRDGLPGEPG--LD 208
            +G              G  GR                      G  G  G PGEPG  + 
Sbjct: 2063 QGFRGPPGPSGMPGFPGVLGRPGNQGEPGPPGPPGAAGPPGSQGPSGMKGDPGEPGASIR 2122

Query: 209  GIPGRNG------------------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G+PG  G                          G  GK G+PG+DG+P   G +GE GM 
Sbjct: 2123 GLPGPQGSMGLPGPPGPPGLVGPPGAPGLPGQVGESGKPGVPGRDGVP---GKDGEPGMP 2179

Query: 245  GPRGNRGKSGINGVPGTPAIC 265
            G  G  G  G  G  G PA+ 
Sbjct: 2180 GKLGIAGPPGAKGEKGEPALL 2200



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 106/274 (38%), Gaps = 113/274 (41%)

Query: 98   AMQG-FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGA 141
            AM+G       E  PPGL+G    KGE GA+GE G KG               E+G  G+
Sbjct: 1988 AMEGSLMGFPGERGPPGLKG---VKGEPGAEGERGPKGDKGEGGSRGERGEPGEKGRDGS 2044

Query: 142  PGVVGPPGPQGIPGDEGKRGPKG------------------------------------D 165
            PG+   PG +G+ G EGK GP+G                                     
Sbjct: 2045 PGL---PGERGLAGPEGKPGPQGFRGPPGPSGMPGFPGVLGRPGNQGEPGPPGPPGAAGP 2101

Query: 166  MGYPGPQGIPGDEGK--------RGPKGDM------------------------GYPGRI 193
             G  GP G+ GD G+         GP+G M                        G  G+ 
Sbjct: 2102 PGSQGPSGMKGDPGEPGASIRGLPGPQGSMGLPGPPGPPGLVGPPGAPGLPGQVGESGKP 2161

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG-----IPGTNGTNGEKGMTGPRG 248
            G+ GRDG+PG+ G  G+PG+ G+ G PG  G  G+       + G  G+ G +G+ GP+G
Sbjct: 2162 GVPGRDGVPGKDGEPGMPGKLGIAGPPGAKGEKGEPALLEGVLLGEPGSKGARGLPGPKG 2221

Query: 249  N------------------RGKSGINGVPGTPAI 264
                               +G SG+ G  GTP +
Sbjct: 2222 EKGEPGGAGEPGDPGEDGAKGSSGVKGEKGTPGV 2255



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 67/158 (42%), Gaps = 51/158 (32%)

Query: 101  GFCNSTKEYCPPGL------QGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------- 144
            G   +  E  PPGL      +GP G  G  G  G+ G+ GE+GE+G PG+          
Sbjct: 1630 GAKGAKGESGPPGLPGVRGIEGPRGPPGARGDPGDRGLSGEKGERGPPGLDGRNGLEGKP 1689

Query: 145  --------------VGPPGPQGIPGDEGKRGPKG---------------DMGYPG----- 170
                           G PG  G+PG  G++GP G               D G PG     
Sbjct: 1690 GPPGPAGLRGDPGKQGDPGRDGLPGLRGEQGPPGTIGPLGPPGIPGKPGDDGKPGLNGKN 1749

Query: 171  -PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
               G PG++G++G KGD G PGR G  G  G  G+ G+
Sbjct: 1750 GEDGTPGEDGRKGDKGDAGAPGRDGHSGAKGEQGDRGM 1787



 Score = 46.2 bits (108), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 94/278 (33%), Gaps = 130/278 (46%)

Query: 113  GLQGPIGQK------------GEIGAKGEMGVKGERGEKGAPGV---------------- 144
            GL GP G+K            GE GAKG  GVKGE   KG PGV                
Sbjct: 2215 GLPGPKGEKGEPGGAGEPGDPGEDGAKGSSGVKGE---KGTPGVGVRGPPGQDGPPGLKG 2271

Query: 145  ----------------VGPPGPQGIPGDE------------------------------- 157
                             G PG  G+ GD                                
Sbjct: 2272 DIGLPGPPGPPGLVGIAGAPGQPGLRGDSGQPGPPGAPGERGAIGFPGRDGAAGPPGPQG 2331

Query: 158  --------GKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLP---- 202
                    G  G KGD G PG  G+PG  G+R   GP+G+ G PG  G  G  GLP    
Sbjct: 2332 PPGPVGIQGASGLKGDKGDPG-AGLPGARGERGDPGPRGEDGRPGLAGDRGPMGLPGNRG 2390

Query: 203  ---------------------------------GEPGLDGIPGRNGMDGIPGKDGLPGKD 229
                                             GEPG  G+ G  G  G  G+ G+PG+ 
Sbjct: 2391 ERGDKGDVGAVGPKGDKGDTVVVEGPAGARGSKGEPGDRGLKGTEGDKGEKGEQGMPGEK 2450

Query: 230  GI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G    PG  G+ G  G  GP G +G+ G+ G PG P +
Sbjct: 2451 GARGEPGERGSAGFPGARGPGGQKGEVGVPGEPGEPGL 2488



 Score = 43.1 bits (100), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 85/224 (37%), Gaps = 84/224 (37%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDE--------GKRGPKGDM 166
            +G+ G+ G  G  GV G+ GE G PG   + GPPG +G  G+         G+ G KG  
Sbjct: 2155 VGESGKPGVPGRDGVPGKDGEPGMPGKLGIAGPPGAKGEKGEPALLEGVLLGEPGSKGAR 2214

Query: 167  GYPGPQGI------------PGDEGKRGPKGDMGYPGRIGLDGRD--------------- 199
            G PGP+G             PG++G +G  G  G  G  G+  R                
Sbjct: 2215 GLPGPKGEKGEPGGAGEPGDPGEDGAKGSSGVKGEKGTPGVGVRGPPGQDGPPGLKGDIG 2274

Query: 200  --------------GLPGEPGLDG---------IPGRNGMDGIPGKD------------- 223
                          G PG+PGL G          PG  G  G PG+D             
Sbjct: 2275 LPGPPGPPGLVGIAGAPGQPGLRGDSGQPGPPGAPGERGAIGFPGRDGAAGPPGPQGPPG 2334

Query: 224  --------GLPGKDGIPGTN--GTNGEKGMTGPRGNRGKSGING 257
                    GL G  G PG    G  GE+G  GPRG  G+ G+ G
Sbjct: 2335 PVGIQGASGLKGDKGDPGAGLPGARGERGDPGPRGEDGRPGLAG 2378



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 88/258 (34%), Gaps = 101/258 (39%)

Query: 101  GFCNSTKEYCPPGLQGPI------------------GQKGEIGAKGEMGVKGERGEKGAP 142
            G      E  PPG  GP+                  G+ GE G  GE G KG++G+ GAP
Sbjct: 1711 GLPGLRGEQGPPGTIGPLGPPGIPGKPGDDGKPGLNGKNGEDGTPGEDGRKGDKGDAGAP 1770

Query: 143  GVVGPPGPQGIPGDEGKR-----------------------------GPKGDMGYPGPQG 173
            G  G  G +G  GD G                               GPKGD G PGP+G
Sbjct: 1771 GRDGHSGAKGEQGDRGMPGLPGPPGVPGVPGQVGPPGQGSPGLRGIAGPKGDPGEPGPRG 1830

Query: 174  --------------------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                                            +P  E  RG KG  G PG  G  GR+G 
Sbjct: 1831 EPNIERSLEALGIKISSLKELTGAYDGSSDSFLPVSERLRGQKGSRGEPGERGPPGREGS 1890

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKD----------------------GIPGTNGTNG 239
             G PG  G  G  G  G PG  G  G+                       G+PG  G  G
Sbjct: 1891 LGFPGERGPKGDKGDQGAPGPQGPTGRAVGERGLEGPPGQPGEPGKPGIPGVPGRAGELG 1950

Query: 240  EKGMTGPRGNRGKSGING 257
            E G  G +G+RG+ G  G
Sbjct: 1951 EAGRPGEKGDRGEKGDRG 1968



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 88/233 (37%), Gaps = 93/233 (39%)

Query: 112  PGLQGPIGQKGEIGAKGEMG--------VKGERGEKGAPGVVGPPGPQGI---------P 154
            PG+ G +G  G  GAKGE G        + GE G KGA G+ GP G +G          P
Sbjct: 2176 PGMPGKLGIAGPPGAKGEKGEPALLEGVLLGEPGSKGARGLPGPKGEKGEPGGAGEPGDP 2235

Query: 155  GDEGKRGP---KGDMGYPGP--------------------------------QGIPGDEG 179
            G++G +G    KG+ G PG                                  G PG  G
Sbjct: 2236 GEDGAKGSSGVKGEKGTPGVGVRGPPGQDGPPGLKGDIGLPGPPGPPGLVGIAGAPGQPG 2295

Query: 180  KRG------------PKGDMGYPGR---------------------IGLDGRD-----GL 201
             RG             +G +G+PGR                      GL G       GL
Sbjct: 2296 LRGDSGQPGPPGAPGERGAIGFPGRDGAAGPPGPQGPPGPVGIQGASGLKGDKGDPGAGL 2355

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRG 251
            PG  G  G PG  G DG PG  G  G  G+PG  G  G+K   G  GP+G++G
Sbjct: 2356 PGARGERGDPGPRGEDGRPGLAGDRGPMGLPGNRGERGDKGDVGAVGPKGDKG 2408


>gi|395534384|ref|XP_003769222.1| PREDICTED: collagen alpha-1(XXI) chain isoform 2 [Sarcophilus
           harrisii]
          Length = 954

 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 103/214 (48%), Gaps = 22/214 (10%)

Query: 73  EKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIG------------Q 120
           E+  + +    P   LN  S +        C   K    PGLQGP G            Q
Sbjct: 413 EQNNRETACEIPGFCLNGPSDVGSTPAPCVCPPGK----PGLQGPKGEPGQPGNHGYPGQ 468

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            G+ G  G  G+ G  G  G+PG+ G    PG +G PG  G +G +G  G+PG  G+PG 
Sbjct: 469 PGQDGKPGYQGISGNPGIPGSPGIQGARGLPGYKGEPGRGGNKGDRGLPGFPGQHGMPGS 528

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
           +G  GPKG+ G PG  G  G  G  G  G  G+PGR+G  G  GKDGL G  G     G 
Sbjct: 529 KGDMGPKGEKGSPGFYGKKGAKGEKGNTGFPGLPGRSGEPGRDGKDGLMGSQGF---KGE 585

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G++G  GP G RG+ GI G PG+  +   K E+
Sbjct: 586 TGQQGAPGPEGQRGEPGIPGFPGSQGLMGQKGET 619



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/167 (41%), Positives = 87/167 (52%), Gaps = 27/167 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGVVGPPGPQGIPGDEGKR 160
           GL G  GQ G  G+KG+MG KGE+G  G              G  G PG  G PG +GK 
Sbjct: 515 GLPGFPGQHGMPGSKGDMGPKGEKGSPGFYGKKGAKGEKGNTGFPGLPGRSGEPGRDGKD 574

Query: 161 GPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G  G+ G    QG PG EG+RG  G  G+PG  GL G+ G  G PG  G  G  G++
Sbjct: 575 GLMGSQGFKGETGQQGAPGPEGQRGEPGIPGFPGSQGLMGQKGETGPPGPQGKKGAPGLN 634

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G+ G+DG PG+ G PG             +GNRG+ G+ G+ G+P I
Sbjct: 635 GLMGQDGSPGQPGTPGL------------KGNRGEPGVQGISGSPGI 669



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 86/174 (49%), Gaps = 27/174 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  G  G+ G+ G  G  G KGE G++GAPG     G PG  G PG +G  G KG+ G 
Sbjct: 562 PGRSGEPGRDGKDGLMGSQGFKGETGQQGAPGPEGQRGEPGIPGFPGSQGLMGQKGETGP 621

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGPQG          KG  G  G +G DG  G PG PGL G  G  G+ GI G  G+ G+
Sbjct: 622 PGPQGK---------KGAPGLNGLMGQDGSPGQPGTPGLKGNRGEPGVQGISGSPGIKGE 672

Query: 229 DGI---------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G+               PG  G NG  G  GP+G +G++G +G PG   I  +
Sbjct: 673 QGLSGPPGEPGYPGLPGTPGKKGDNGNPGEKGPQGQKGENGRSGDPGPQGIPGH 726



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 86/183 (46%), Gaps = 24/183 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  QGF   T +   PG +G  G+ G  G  G  G+ G++GE       GPPGPQG  G
Sbjct: 576 LMGSQGFKGETGQQGAPGPEGQRGEPGIPGFPGSQGLMGQKGE------TGPPGPQGKKG 629

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL-------------- 201
             G  G  G  G PG  G PG +G RG  G  G  G  G+ G  GL              
Sbjct: 630 APGLNGLMGQDGSPGQPGTPGLKGNRGEPGVQGISGSPGIKGEQGLSGPPGEPGYPGLPG 689

Query: 202 -PGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG+ G +G PG  G  G  G++G    PG  GIPG  G  GEKG  G  G+RG SG  G
Sbjct: 690 TPGKKGDNGNPGEKGPQGQKGENGRSGDPGPQGIPGHLGAKGEKGEKGDSGSRGVSGPKG 749

Query: 258 VPG 260
             G
Sbjct: 750 ESG 752



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 82/171 (47%), Gaps = 18/171 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG +GQKGE G  G  G KG  G  G  G  G PG  G PG +G RG  G  G  G 
Sbjct: 607 PGSQGLMGQKGETGPPGPQGKKGAPGLNGLMGQDGSPGQPGTPGLKGNRGEPGVQGISGS 666

Query: 172 QGIPGDEGKR---------------GPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGR 213
            GI G++G                 G KGD G PG  G  G+   +G  G+PG  GIPG 
Sbjct: 667 PGIKGEQGLSGPPGEPGYPGLPGTPGKKGDNGNPGEKGPQGQKGENGRSGDPGPQGIPGH 726

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G+ G  G  G+ G  G +G  G+ GP G RG+ G  G  G P +
Sbjct: 727 LGAKGEKGEKGDSGSRGVSGPKGESGMDGLMGPIGPRGQHGETGPRGPPGL 777



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 88/188 (46%), Gaps = 27/188 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------D 156
           PGL G +GQ G  G  G  G+KG RGE G  G+ G PG +G  G                
Sbjct: 631 PGLNGLMGQDGSPGQPGTPGLKGNRGEPGVQGISGSPGIKGEQGLSGPPGEPGYPGLPGT 690

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            GK+G  G+ G  GPQG  G+ G+ G  G  G PG +G  G  G  G+ G  G+ G  G 
Sbjct: 691 PGKKGDNGNPGEKGPQGQKGENGRSGDPGPQGIPGHLGAKGEKGEKGDSGSRGVSGPKGE 750

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G+         DG+ G  G  G+ G TGP   RG  G++G PG      + R+ C+ + 
Sbjct: 751 SGM---------DGLMGPIGPRGQHGETGP---RGPPGLDGKPGREFSEQFIRQVCTDVL 798

Query: 277 NSETSQLL 284
            ++   LL
Sbjct: 799 RAQLPVLL 806



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---IPGKDGLPGKDGI 231
           PG  G +GPKG+ G PG        G PG+PG DG PG  G+ G   IPG  G+ G  G+
Sbjct: 445 PGKPGLQGPKGEPGQPGN------HGYPGQPGQDGKPGYQGISGNPGIPGSPGIQGARGL 498

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG  G  G  G  G RG  G  G +G+PG+      K E  S
Sbjct: 499 PGYKGEPGRGGNKGDRGLPGFPGQHGMPGSKGDMGPKGEKGS 540


>gi|380027350|ref|XP_003697390.1| PREDICTED: collagen alpha-1(XI) chain-like [Apis florea]
          Length = 1782

 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 94/172 (54%), Gaps = 3/172 (1%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG +G  G +G +G+ G+ G  G  G+PG  G PG  G  G++G +GP+G +G+PG
Sbjct: 665 PPGPQGLLGPTGLVGPQGKPGIPGLSGADGSPGHPGNPGIPGTKGEQGLQGPQGPIGFPG 724

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            +GI GDEGKRG  G+ G  G  G++G     G+ G  G PG +G  GIPG +GL G  G
Sbjct: 725 VRGIKGDEGKRGSPGERGEKGEKGVEGDK---GDVGAKGEPGLSGPQGIPGLEGLEGPKG 781

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
             G  G +G  G  G +G  G  G  G PG P     K +     PN +  +
Sbjct: 782 FEGPRGESGLIGSPGEKGKTGPPGFVGYPGNPGEKGDKGQPGREGPNGDKGE 833



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 93/179 (51%), Gaps = 30/179 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQGP   +G IG  G  G+KG+ G++G+PG  G  G +G+ GD+G  G KG+ G  GPQ
Sbjct: 712 GLQGP---QGPIGFPGVRGIKGDEGKRGSPGERGEKGEKGVEGDKGDVGAKGEPGLSGPQ 768

Query: 173 GIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGI---PGRNGMDGIPGKDGLP 226
           GIPG EG  GPKG     G  G IG  G  G  G PG  G    PG  G  G PG++G  
Sbjct: 769 GIPGLEGLEGPKGFEGPRGESGLIGSPGEKGKTGPPGFVGYPGNPGEKGDKGQPGREGPN 828

Query: 227 GKDGIPGTNGTNGEK------------------GMTGPRGNRGK---SGINGVPGTPAI 264
           G  G  GTNG  GE+                  G+ GP+G+ G+    G+ G PG P I
Sbjct: 829 GDKGERGTNGAQGERGEPGPRGFRGARGRRGAEGLPGPKGDTGQPGPPGLQGEPGPPGI 887



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 84/165 (50%), Gaps = 21/165 (12%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L  + G      E   PGL GP G KG    +GE G  GE G +G+ G  GPPGP G+ G
Sbjct: 998  LSGLPGMPGVKGEIGSPGLPGPSGDKG---VQGEPGKDGEPGPQGSQGSKGPPGPVGLKG 1054

Query: 156  DEGKRGPKGDMGY------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            D G+ GP G +G             PGP G+PG++G    KGD+G PG  G  G  G  G
Sbjct: 1055 DRGEPGPIGPIGRDGLPGQRGLPGSPGPVGVPGEDGD---KGDIGPPGEKGFKGSQGEMG 1111

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             PG  GI    G+ G PG  GLPG+ G PG  G  G KG  GP G
Sbjct: 1112 PPGPIGI---QGIRGEPGAIGLPGEKGPPGEIGRQGAKGEDGPVG 1153



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 82/149 (55%), Gaps = 12/149 (8%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            E G  G  G+ G +GE G+PG+ GP G +G+ G+ GK G       PGPQG  G +G  G
Sbjct: 995  ERGLSGLPGMPGVKGEIGSPGLPGPSGDKGVQGEPGKDG------EPGPQGSQGSKGPPG 1048

Query: 183  P---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            P   KGD G PG IG  GRDGLPG+    G+PG  G  G+PG+DG  G  G PG  G  G
Sbjct: 1049 PVGLKGDRGEPGPIGPIGRDGLPGQ---RGLPGSPGPVGVPGEDGDKGDIGPPGEKGFKG 1105

Query: 240  EKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             +G  GP G  G  GI G PG   +   K
Sbjct: 1106 SQGEMGPPGPIGIQGIRGEPGAIGLPGEK 1134



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 100/226 (44%), Gaps = 51/226 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG---------------EKGAPGVVGP------PGP 150
           PGL G  G++G +GA GE G+ G  G               E G  G +GP      PG 
Sbjct: 570 PGLPGDKGERGAVGATGEQGLPGHEGMQGDDGPPGLPGLPGEMGPRGFIGPRGFPGLPGN 629

Query: 151 QGIPGDEGKRGPKGD------------------MGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            GIPG EG  G KG+                  +G PGPQG+ G  G  GP+G  G PG 
Sbjct: 630 PGIPGSEGPPGAKGNTGPPGPPGSPGSPGPIGAVGPPGPQGLLGPTGLVGPQGKPGIPGL 689

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNGEKGM 243
            G DG  G PG PG+ G  G  G+ G  G  G P         GK G PG  G  GEKG+
Sbjct: 690 SGADGSPGHPGNPGIPGTKGEQGLQGPQGPIGFPGVRGIKGDEGKRGSPGERGEKGEKGV 749

Query: 244 TGPRGN---RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
            G +G+   +G+ G++G  G P +   +       P  E+  +  P
Sbjct: 750 EGDKGDVGAKGEPGLSGPQGIPGLEGLEGPKGFEGPRGESGLIGSP 795



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 84/148 (56%), Gaps = 15/148 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGEIG+ G  G  G++G +G PG  G PGPQG    +G +GP      PGP 
Sbjct: 1000 GLPGMPGVKGEIGSPGLPGPSGDKGVQGEPGKDGEPGPQG---SQGSKGP------PGPV 1050

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+ GD G+ GP G +G   R GL G+ GLPG PG  G+PG    DG  G  G PG+ G  
Sbjct: 1051 GLKGDRGEPGPIGPIG---RDGLPGQRGLPGSPGPVGVPGE---DGDKGDIGPPGEKGFK 1104

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G  G  G  G +G RG+ G  G+PG
Sbjct: 1105 GSQGEMGPPGPIGIQGIRGEPGAIGLPG 1132



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 86/178 (48%), Gaps = 39/178 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP+G  GE G KG++G  GE+G KG+ G +GPPGP GI   +G RG  G +G PG 
Sbjct: 1077 PGSPGPVGVPGEDGDKGDIGPPGEKGFKGSQGEMGPPGPIGI---QGIRGEPGAIGLPGE 1133

Query: 172  QGIPGDEGKRGPKGD------------------------------------MGYPGRIGL 195
            +G PG+ G++G KG+                                    +G  G  G 
Sbjct: 1134 KGPPGEIGRQGAKGEDGPVGASGPPGPVGPQGLPGSQGLKGEVGDAGLVGPVGPAGSPGA 1193

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
             G  G  G  GL G+PG  G+ G  G+ G PG  G  G  G  GE+G  GP+G  GKS
Sbjct: 1194 QGPRGPKGSEGLQGLPGPEGLQGQKGEAGAPGLPGSIGPEGKPGERGPPGPKGEEGKS 1251



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 96/242 (39%), Gaps = 81/242 (33%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAK---GEMGVKGERGEKGAPGVVGPPGPQGI 153
            V   G          PG QGP G KG  G +   G  G++G++GE GAPG+ G  GP+G 
Sbjct: 1176 VGDAGLVGPVGPAGSPGAQGPRGPKGSEGLQGLPGPEGLQGQKGEAGAPGLPGSIGPEGK 1235

Query: 154  PGDEGKRGPKGDMGYP------------GPQ---------------------GIPGDEGK 180
            PG+ G  GPKG+ G              GP+                     G+ GD GK
Sbjct: 1236 PGERGPPGPKGEEGKSGPPGPPGERGINGPEGPKGNAGPPGFPGPPGEPGLIGVKGDSGK 1295

Query: 181  R------------------------GPKGDMGYPGRIGLDGRDGLPGE------PGLDGI 210
                                     GP G  G  G  G+ G  G PGE      PG  G 
Sbjct: 1296 DGEDGKPGDPGPPGEIGPPGKEGLPGPPGKQGSEGPAGVQGSPGSPGEKGDVGPPGAQGS 1355

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---------------GPRGNRGKSGI 255
            PG  G  G+PG  GLPG  G+PG  G NG  GM                GP+G+RGK G+
Sbjct: 1356 PGSIGPQGLPGPFGLPGIRGLPGLAGENGPPGMAGAVGAPGKVGPIGPKGPKGDRGKRGL 1415

Query: 256  NG 257
             G
Sbjct: 1416 KG 1417



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 91/182 (50%), Gaps = 21/182 (11%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ-------- 151
           +G   S  E    G +G  G KG++GAKGE G+ G +G  G  G+ GP G +        
Sbjct: 732 EGKRGSPGERGEKGEKGVEGDKGDVGAKGEPGLSGPQGIPGLEGLEGPKGFEGPRGESGL 791

Query: 152 -GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP----- 205
            G PG++GK GP G +GYPG  G  GD+G+ G +G  G  G  G +G  G  GEP     
Sbjct: 792 IGSPGEKGKTGPPGFVGYPGNPGEKGDKGQPGREGPNGDKGERGTNGAQGERGEPGPRGF 851

Query: 206 -------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                  G +G+PG  G  G PG  GL G+ G PG  G  G  G  G  G  GK GI G 
Sbjct: 852 RGARGRRGAEGLPGPKGDTGQPGPPGLQGEPGPPGIEGPRGFVGAPGQIGLNGKDGILGP 911

Query: 259 PG 260
           PG
Sbjct: 912 PG 913



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 88/197 (44%), Gaps = 42/197 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------------VVGPPGPQGI- 153
           G +G IG +G  G  G  G+ G  G  GA G                   VGPPGPQG+ 
Sbjct: 613 GPRGFIGPRGFPGLPGNPGIPGSEGPPGAKGNTGPPGPPGSPGSPGPIGAVGPPGPQGLL 672

Query: 154 -----------PGDEGKRGPKGDMGYPGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRD 199
                      PG  G  G  G  G+PG  GIP   G++G +GP+G +G+PG  G+ G +
Sbjct: 673 GPTGLVGPQGKPGIPGLSGADGSPGHPGNPGIPGTKGEQGLQGPQGPIGFPGVRGIKGDE 732

Query: 200 GLPGEPGLDGIPGRNGMD------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR--- 250
           G  G PG  G  G  G++      G  G+ GL G  GIPG  G  G KG  GPRG     
Sbjct: 733 GKRGSPGERGEKGEKGVEGDKGDVGAKGEPGLSGPQGIPGLEGLEGPKGFEGPRGESGLI 792

Query: 251 GKSGINGVPGTPAICAY 267
           G  G  G  G P    Y
Sbjct: 793 GSPGEKGKTGPPGFVGY 809



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 87/199 (43%), Gaps = 36/199 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   QG         P G +GP G+ G IG+ GE G  G  G  G PG  G  G +G PG
Sbjct: 764 LSGPQGIPGLEGLEGPKGFEGPRGESGLIGSPGEKGKTGPPGFVGYPGNPGEKGDKGQPG 823

Query: 156 DEGKRGPKGDMGYPGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDG 200
            EG  G KG+ G  G QG  G+               EG  GPKGD G PG  GL G   
Sbjct: 824 REGPNGDKGERGTNGAQGERGEPGPRGFRGARGRRGAEGLPGPKGDTGQPGPPGLQG--- 880

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---------------G 245
              EPG  GI G  G  G PG+ GL GKDGI G  G  G  G +               G
Sbjct: 881 ---EPGPPGIEGPRGFVGAPGQIGLNGKDGILGPPGERGPVGDSGPPGPPGAPGVIGPQG 937

Query: 246 PRGNRGKSGINGVPGTPAI 264
           P G  G+ G  G PG P +
Sbjct: 938 PAGEPGQPGEPGSPGNPGV 956



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 79/165 (47%), Gaps = 39/165 (23%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------------EG 158
           PPG  G  G  GE G KG+ G +G  G+KG  G  G  G +G PG             EG
Sbjct: 803 PPGFVGYPGNPGEKGDKGQPGREGPNGDKGERGTNGAQGERGEPGPRGFRGARGRRGAEG 862

Query: 159 KRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL-------- 207
             GPKGD G PGP   QG PG  G  GP+G +G PG+IGL+G+DG+ G PG         
Sbjct: 863 LPGPKGDTGQPGPPGLQGEPGPPGIEGPRGFVGAPGQIGLNGKDGILGPPGERGPVGDSG 922

Query: 208 ----------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                            G PG+ G  G PG  G+PG+ G PG  G
Sbjct: 923 PPGPPGAPGVIGPQGPAGEPGQPGEPGSPGNPGVPGELGPPGQQG 967



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 85/172 (49%), Gaps = 24/172 (13%)

Query: 100  QGFCNSTKEYCPP---GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------ 150
            +GF  S  E  PP   G+QG  G+ G IG  GE G  GE G +GA G  GP G       
Sbjct: 1101 KGFKGSQGEMGPPGPIGIQGIRGEPGAIGLPGEKGPPGEIGRQGAKGEDGPVGASGPPGP 1160

Query: 151  ---------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                     QG+ G+ G  G  G +   GP G PG +G RGPKG  G  G  G +G  G 
Sbjct: 1161 VGPQGLPGSQGLKGEVGDAGLVGPV---GPAGSPGAQGPRGPKGSEGLQGLPGPEGLQGQ 1217

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGNR 250
             GE G  G+PG  G +G PG+ G PG  G  G +   G  GE+G+ GP G +
Sbjct: 1218 KGEAGAPGLPGSIGPEGKPGERGPPGPKGEEGKSGPPGPPGERGINGPEGPK 1269



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 83/165 (50%), Gaps = 12/165 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL GP G++G  G  G  G  G  GEKG    VGPPG QG PG  G +G  G  G PG +
Sbjct: 1318 GLPGPPGKQGSEGPAGVQGSPGSPGEKGD---VGPPGAQGSPGSIGPQGLPGPFGLPGIR 1374

Query: 173  GIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG------IPGKD 223
            G+PG  G+ GP    G +G PG++G  G  G  G+ G  G+ G  G  G        G+ 
Sbjct: 1375 GLPGLAGENGPPGMAGAVGAPGKVGPIGPKGPKGDRGKRGLKGHRGELGDAGLKGEEGEK 1434

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G+PG+ G  G +G  G  G +G  G  G+PG   +   K
Sbjct: 1435 GEQGPRGVPGSEGPKGNQGPPGSMGFKGNDGPPGLPGIEGLVGPK 1479



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 92/216 (42%), Gaps = 57/216 (26%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP------GVVGPPG 149
            L   +G      E   PGL G IG +G+ G +G  G KGE G+ G P      G+ GP G
Sbjct: 1208 LPGPEGLQGQKGEAGAPGLPGSIGPEGKPGERGPPGPKGEEGKSGPPGPPGERGINGPEG 1267

Query: 150  P------------------------------------------------QGIPGDEGKRG 161
            P                                                +G+PG  GK+G
Sbjct: 1268 PKGNAGPPGFPGPPGEPGLIGVKGDSGKDGEDGKPGDPGPPGEIGPPGKEGLPGPPGKQG 1327

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDG 218
             +G  G  G  G PG++G  GP G  G PG I   GL G  GLPG  GL G+ G NG  G
Sbjct: 1328 SEGPAGVQGSPGSPGEKGDVGPPGAQGSPGSIGPQGLPGPFGLPGIRGLPGLAGENGPPG 1387

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            + G  G PGK G  G  G  G++G  G +G+RG+ G
Sbjct: 1388 MAGAVGAPGKVGPIGPKGPKGDRGKRGLKGHRGELG 1423



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 89/226 (39%), Gaps = 63/226 (27%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-------- 149
             + G    T +  PPGLQG  G  G  G +G +G  G+ G  G  G++GPPG        
Sbjct: 862  GLPGPKGDTGQPGPPGLQGEPGPPGIEGPRGFVGAPGQIGLNGKDGILGPPGERGPVGDS 921

Query: 150  ----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR------------ 181
                            P G PG  G+ G  G+ G PG  G PG +GK             
Sbjct: 922  GPPGPPGAPGVIGPQGPAGEPGQPGEPGSPGNPGVPGELGPPGQQGKEGPQGPPGLPGKE 981

Query: 182  ------------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRN 214
                                    G KG++G PG  G  G  G+ GEPG DG P   G  
Sbjct: 982  GQPGPGGLPGFPGERGLSGLPGMPGVKGEIGSPGLPGPSGDKGVQGEPGKDGEPGPQGSQ 1041

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G PG  GL G  G PG  G  G  G+ G RG  G  G  GVPG
Sbjct: 1042 GSKGPPGPVGLKGDRGEPGPIGPIGRDGLPGQRGLPGSPGPVGVPG 1087



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 9/123 (7%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L  ++G      E  PPG+ G +G  G++G  G  G KG+RG++G  G       +G  G
Sbjct: 1370 LPGIRGLPGLAGENGPPGMAGAVGAPGKVGPIGPKGPKGDRGKRGLKGH------RGELG 1423

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            D G +G +G+ G  GP+G+PG E   GPKG+ G PG +G  G DG PG PG++G+ G  G
Sbjct: 1424 DAGLKGEEGEKGEQGPRGVPGSE---GPKGNQGPPGSMGFKGNDGPPGLPGIEGLVGPKG 1480

Query: 216  MDG 218
              G
Sbjct: 1481 SAG 1483



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 85/214 (39%), Gaps = 78/214 (36%)

Query: 125 GAKGEMGVKGERGEK------------------------GAPGVVGPPGPQGIPGDEGKR 160
           G  GE+G  G RGE+                        GAPG+ G  G  G+PG  G +
Sbjct: 517 GEPGEIGEPGPRGERGIPGNTGREGRRGRPGRDGERGLSGAPGMKGEQGVPGLPGLPGDK 576

Query: 161 GPKGDMGYPGPQGIPGDEGKR---------------------GPKGDMGYPGRIGLDGRD 199
           G +G +G  G QG+PG EG +                     GP+G  G PG  G+ G +
Sbjct: 577 GERGAVGATGEQGLPGHEGMQGDDGPPGLPGLPGEMGPRGFIGPRGFPGLPGNPGIPGSE 636

Query: 200 GLPGEP---------------------------------GLDGIPGRNGMDGIPGKDGLP 226
           G PG                                   GL G  G+ G+ G+ G DG P
Sbjct: 637 GPPGAKGNTGPPGPPGSPGSPGPIGAVGPPGPQGLLGPTGLVGPQGKPGIPGLSGADGSP 696

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G PG  GT GE+G+ GP+G  G  G+ G+ G
Sbjct: 697 GHPGNPGIPGTKGEQGLQGPQGPIGFPGVRGIKG 730



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 83/165 (50%), Gaps = 27/165 (16%)

Query: 111  PPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKG 164
            PPG QG   P G +G  G+ GE G  G  G +G+PG +GP   PGP G+PG  G  G  G
Sbjct: 1322 PPGKQGSEGPAGVQGSPGSPGEKGDVGPPGAQGSPGSIGPQGLPGPFGLPGIRGLPGLAG 1381

Query: 165  DMGYPG---------------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            + G PG               P+G  GD GKRG KG  G  G  GL G +G  GE G  G
Sbjct: 1382 ENGPPGMAGAVGAPGKVGPIGPKGPKGDRGKRGLKGHRGELGDAGLKGEEGEKGEQGPRG 1441

Query: 210  IPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            +PG  G     G PG  G  G DG PG  G    +G+ GP+G+ G
Sbjct: 1442 VPGSEGPKGNQGPPGSMGFKGNDGPPGLPGI---EGLVGPKGSAG 1483



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 89/239 (37%), Gaps = 96/239 (40%)

Query: 112  PGLQGPIGQKGEIG------------------------AKGEMGVKGERGEKGAPGVVGP 147
            PG +GP G KGE G                        A+G  G KG+ G+ G PG+ G 
Sbjct: 822  PGREGPNGDKGERGTNGAQGERGEPGPRGFRGARGRRGAEGLPGPKGDTGQPGPPGLQGE 881

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------------------GPKGD 186
            PGP GI G  G  G  G +G  G  GI G  G+R                     GP G+
Sbjct: 882  PGPPGIEGPRGFVGAPGQIGLNGKDGILGPPGERGPVGDSGPPGPPGAPGVIGPQGPAGE 941

Query: 187  MGYPGRIGLDGRDGLPGE------------------------------------------ 204
             G PG  G  G  G+PGE                                          
Sbjct: 942  PGQPGEPGSPGNPGVPGELGPPGQQGKEGPQGPPGLPGKEGQPGPGGLPGFPGERGLSGL 1001

Query: 205  PGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSG 254
            PG+ G+ G  G  G+PG        G PGKDG PG  G+ G KG  GP   +G+RG+ G
Sbjct: 1002 PGMPGVKGEIGSPGLPGPSGDKGVQGEPGKDGEPGPQGSQGSKGPPGPVGLKGDRGEPG 1060


>gi|397526985|ref|XP_003833391.1| PREDICTED: collagen alpha-1(XXVII) chain [Pan paniscus]
          Length = 1969

 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 106/207 (51%), Gaps = 33/207 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG----------------ERGEKGAPGVVGPPGPQGIPGD 156
            G+ GP+G  G  G KGE G  G                +RG++G PG  G PG +G+ G 
Sbjct: 1420 GIVGPLGLPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGL 1479

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR-------DGLPGEPGLDG 209
             GK G +G  G+PGP+G PG +G +G +G  G  G+ G  GR        GL G PG  G
Sbjct: 1480 RGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGFLCTPQGLQGLPGPRG 1539

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            + GR G++GI G DGLPG+DG  G  G    +G+ G  GP G RG  G+ G+PG      
Sbjct: 1540 VVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPG 1599

Query: 267  YKRESCSLLPNSETSQLLIPPTIVGSE 293
            +K ES   LP       L PP   G+E
Sbjct: 1600 FKGESG--LPGQ-----LGPPGKRGTE 1619



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 87/162 (53%), Gaps = 21/162 (12%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYPGPQGI 174
           K   GAKG+MG+ G  G  G PG  G    PGP G PG++G+ GP+G     GYPG QG+
Sbjct: 789 KAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGL 848

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G+PG  G+ G+ G PG 
Sbjct: 849 PGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGL 908

Query: 235 NGTNGEK---------------GMTGPRGNRGKSGINGVPGT 261
           +G  GE                G+ GP G  G  G+ G+ G+
Sbjct: 909 DGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGS 950



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG +GPPG         KRG +G  G 
Sbjct: 1574 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGRTGL 1624

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 1625 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGP 1684

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1685 LGILGPSGLPGPKGDKGSRGDWG 1707



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 87/180 (48%), Gaps = 22/180 (12%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG----PPGPQGI 153
             +QG      +   PG  GP G+ G  G+KG  G KG++G+ GAPG  G    P G QG+
Sbjct: 1475 GVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGFLCTPQGLQGL 1534

Query: 154  PGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGRIGLDGR 198
            PG  G  G +G  G  GP G+PG               D G  GP G  G PG  GL G 
Sbjct: 1535 PGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGA 1594

Query: 199  DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G PG  G  G+PG+    G PGK G  G+ G+PG  G  G KG  G  G  G  G+ G+
Sbjct: 1595 QGPPGFKGESGLPGQL---GPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGL 1651



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 42/191 (21%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KG +G+ GE G+KG++GE+G PGV       G PG +G +G +G  G+PG
Sbjct: 935  PIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGV------SGDPGFQGDKGSQGLPGFPG 988

Query: 171  PQGIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             +G PG  GK G KG               D+G PG    +G +G+ G+PG  G+PG  G
Sbjct: 989  ARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGD---NGPEGMKGKPGARGLPGPRG 1045

Query: 216  ------------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                              ++G PG+ G PG+ G+ G  G  G+ G  GP G +G  G  G
Sbjct: 1046 QLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIG 1105

Query: 258  VPGTPAICAYK 268
            + G P I   K
Sbjct: 1106 LVGEPGIVGEK 1116



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 807 PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGL 866

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN----------- 214
           PG  G+PG +G+RG  G  G  G++G+ G  G+ GE   PGLDG PG             
Sbjct: 867 PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGL 926

Query: 215 -GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G PG  G+ G  G+ GE G+ G +G +G  G++G PG
Sbjct: 927 IGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 973



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 76/144 (52%), Gaps = 12/144 (8%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++G
Sbjct: 779 QKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQG 829

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 830 QPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 889

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G RG  G++G PG
Sbjct: 890 KMGMPGFPGVFGERGPPGLDGNPG 913



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 83/187 (44%), Gaps = 42/187 (22%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPK--------- 163
            GP G +G IG  G  G+ G  GE+G PGV G  G  G+PG     G+RGP          
Sbjct: 856  GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGEL 915

Query: 164  ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                        GD+G  GP G PG +G +G  G +G PG  G  G  G+P   G+PG  
Sbjct: 916  GLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQ 975

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKS 253
            G  G  G+ G PG  G PG  G  G  G+                G  G  GP G +GK 
Sbjct: 976  GDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 1035

Query: 254  GINGVPG 260
            G  G+PG
Sbjct: 1036 GARGLPG 1042



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 80/181 (44%), Gaps = 39/181 (21%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 1263 PGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGE 1322

Query: 169  PGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEP-------- 205
             G +G+ G+               EGK G +G+ G  G  G  G  G  GE         
Sbjct: 1323 KGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGP 1382

Query: 206  -------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                         G  G+PGR G  G PG  G  G  GI G  G  G KG  G +G  GK
Sbjct: 1383 PGTPGPKGSRGSLGPTGVPGRMGAQGEPGLAGYDGHRGIVGPLGLPGPKGEKGEQGEDGK 1442

Query: 253  S 253
            +
Sbjct: 1443 A 1443



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 92/240 (38%), Gaps = 82/240 (34%)

Query: 100  QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------- 146
            QG      E   PGL+G   P+G  G  G +G+ G  GE GEKG  G++G          
Sbjct: 1284 QGLIGQRGE---PGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGV 1340

Query: 147  -----PPGPQGIPGDEGKRGPKGDMGYP---------------------------GPQGI 174
                 P G  G  G++G+ G KG  GY                            GP G+
Sbjct: 1341 TGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGV 1400

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLP-------------------------------- 202
            PG  G +G  G  GY G  G+ G  GLP                                
Sbjct: 1401 PGRMGAQGEPGLAGYDGHRGIVGPLGLPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRG 1460

Query: 203  --GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              GEPG  G PG+ G+ G+ GK G  G+ G PG  G  G KG  G  G +GK G  G PG
Sbjct: 1461 DRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPG 1520



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 71/174 (40%), Gaps = 60/174 (34%)

Query: 144 VVGPPGPQG------------------------------------------IPGDEG--- 158
           ++GPPGP+G                                            GD G   
Sbjct: 728 LMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSP 787

Query: 159 ---KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPG 212
                G KGDMG PG  G PG  G+   KG  GYPG  G  G  G P   G PG  G PG
Sbjct: 788 GKAHDGAKGDMGLPGLSGNPGPPGR---KGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPG 844

Query: 213 RNGMDGI---PGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           R G+ G    PG  G  G  G+P   G  G++GE+G+ G  G RGK G+ G PG
Sbjct: 845 RQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPG 898



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 79/185 (42%), Gaps = 48/185 (25%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDMGYPGP 171
            +G KG  GA GE G+ GE G KG  G      P G PG++      G+ G +GD G  GP
Sbjct: 1251 MGPKGPPGAVGEPGLPGEAGMKGDLG------PLGTPGEQGLIGQRGEPGLEGDSGPMGP 1304

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRD------------GLPGEPGLDGIPGRNGMDGI 219
             G+ GD G  GP G+ G  G+ GL G D            G  G+ G  G  GR G  G 
Sbjct: 1305 DGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGA 1364

Query: 220  PGKDGLPGK------------------------DGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G  G  G+                         G+PG  G  GE G+ G  G+RG  G 
Sbjct: 1365 KGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGVPGRMGAQGEPGLAGYDGHRGIVGP 1424

Query: 256  NGVPG 260
             G+PG
Sbjct: 1425 LGLPG 1429



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 54/101 (53%), Gaps = 12/101 (11%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G+ G  G +GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 1609 QLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQG 1668

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLD 196
             RGP G MG     GP GI G  G  GPKGD G  G  GL 
Sbjct: 1669 PRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGLQ 1709



 Score = 46.2 bits (108), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 59/96 (61%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG  GP G KG+ GA+G  G +G+ G +G  G +GPPG  G+ G  G++G  G  G  G
Sbjct: 1022 PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDG 1081

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             +G PGD G+ GP G+ G+ G IGL G  G+ GE G
Sbjct: 1082 VKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKG 1117


>gi|301604358|ref|XP_002931863.1| PREDICTED: hypothetical protein LOC100492984 [Xenopus (Silurana)
            tropicalis]
          Length = 1650

 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 85/207 (41%), Positives = 104/207 (50%), Gaps = 31/207 (14%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-----PGPQGIPGDEGKRGPKGD 165
            PPG +G  GQ G  G+ G  G  G +GEKG PG+ G      PG +G PG  G  G  G 
Sbjct: 999  PPGSKGSPGQPGRPGSAGSPGFSGLKGEKGEPGISGAGIPGFPGQKGEPGQNGFPGSPGS 1058

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPG------RIGLDGRDG------LPGEPGLDGIPGR 213
             G PG  G+PG  G  GPKGD G PG        GL G DG      LPG PGL G  GR
Sbjct: 1059 KGNPGNPGLPGLPGISGPKGDPGLPGFPGSPGSPGLKGVDGPTGNSGLPGSPGLRGESGR 1118

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGE-----------KGMTGPRGNRGKSGINGVPGTP 262
             G  G PG+ G PG+DGIPG +G  GE            G+ G +G +G +G++G PG P
Sbjct: 1119 PGPQGTPGEKGQPGQDGIPGPSGLKGEPGLPGFGSPGLPGLPGSQGQKGDAGLSGSPGNP 1178

Query: 263  AICAYKRES---CSLLPNSETSQLLIP 286
             +  +K +     S  P   T Q  +P
Sbjct: 1179 GLPGFKGDQGFPGSPGPQGPTGQPGLP 1205



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 97/191 (50%), Gaps = 23/191 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG---- 167
            PG  GP G KG +G   EMG+ G  G KG+PG  G PG  G PG  G +G KG+ G    
Sbjct: 979  PGTSGPPGLKGSMG---EMGLPGPPGSKGSPGQPGRPGSAGSPGFSGLKGEKGEPGISGA 1035

Query: 168  ----YPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                +PG +G PG     G  G KG+ G PG  GL G  G  G+PGL G PG  G  G+ 
Sbjct: 1036 GIPGFPGQKGEPGQNGFPGSPGSKGNPGNPGLPGLPGISGPKGDPGLPGFPGSPGSPGLK 1095

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGT------PAICAYKRES 271
            G DG  G  G+PG+ G  GE G  GP+   G +G+ G +G+PG       P +  +    
Sbjct: 1096 GVDGPTGNSGLPGSPGLRGESGRPGPQGTPGEKGQPGQDGIPGPSGLKGEPGLPGFGSPG 1155

Query: 272  CSLLPNSETSQ 282
               LP S+  +
Sbjct: 1156 LPGLPGSQGQK 1166



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 85/169 (50%), Gaps = 23/169 (13%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G KGE G  G  G+ G +G  G PG  G PG  GIPG  G  G KGD G PG  G  G  
Sbjct: 926  GVKGEPGLPGSSGLSGAKGAAGLPGNSGSPGQIGIPGSPGLPGLKGDSGLPGQPGTSGPP 985

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD--------------GIPGKDG 224
            G +G  G+MG PG  G  G  G PG PG  G PG +G+               G PG+ G
Sbjct: 986  GLKGSMGEMGLPGPPGSKGSPGQPGRPGSAGSPGFSGLKGEKGEPGISGAGIPGFPGQKG 1045

Query: 225  LPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPGTPAI 264
             PG++G PG+ G+ G           G++GP+G+ G  G  G PG+P +
Sbjct: 1046 EPGQNGFPGSPGSKGNPGNPGLPGLPGISGPKGDPGLPGFPGSPGSPGL 1094



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 91/193 (47%), Gaps = 35/193 (18%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + GF  +  E    G+ GP G  G  G  G  G+ G +G  G PG    PG  G+PG E
Sbjct: 849  GLPGFSGAKGEM---GVMGPPGSVGPAGNPGNPGLPGSKGNDGNPGQ---PGLSGLPGAE 902

Query: 158  GKRGPKGDMGYPGPQG-----------------IPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            G+   KG+ G PGP G                 +PG  G  G KG  G PG  G  G+ G
Sbjct: 903  GE---KGERGLPGPPGRVDSANLQFKGVKGEPGLPGSSGLSGAKGAAGLPGNSGSPGQIG 959

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP- 259
            +PG PGL   PG  G  G+PG+   PG  G PG  G+ GE G+ GP G++G  G  G P 
Sbjct: 960  IPGSPGL---PGLKGDSGLPGQ---PGTSGPPGLKGSMGEMGLPGPPGSKGSPGQPGRPG 1013

Query: 260  --GTPAICAYKRE 270
              G+P     K E
Sbjct: 1014 SAGSPGFSGLKGE 1026



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 85/175 (48%), Gaps = 17/175 (9%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              + GF     E    G  G  G KG  G  G  G+ G  G KG PG+ G PG  G PG 
Sbjct: 1035 AGIPGFPGQKGEPGQNGFPGSPGSKGNPGNPGLPGLPGISGPKGDPGLPGFPGSPGSPGL 1094

Query: 157  EGKRGP------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP-- 202
            +G  GP            +G+ G PGPQG PG++G+    G  G PG  GL G  GLP  
Sbjct: 1095 KGVDGPTGNSGLPGSPGLRGESGRPGPQGTPGEKGQ---PGQDGIPGPSGLKGEPGLPGF 1151

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PGL G+PG  G  G  G  G PG  G+PG  G  G  G  GP+G  G+ G+ G
Sbjct: 1152 GSPGLPGLPGSQGQKGDAGLSGSPGNPGLPGFKGDQGFPGSPGPQGPTGQPGLPG 1206



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 85/180 (47%), Gaps = 28/180 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG--------------PQGIPGDE 157
            PGL G  G  G  G  G  G+ G  GEKG  G+ GPPG                G+PG  
Sbjct: 878  PGLPGSKGNDGNPGQPGLSGLPGAEGEKGERGLPGPPGRVDSANLQFKGVKGEPGLPGSS 937

Query: 158  GKRGPKGDMGYPGPQG------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G  G KG  G PG  G      IPG  G  G KGD G PG+ G  G  GL G  G  G+P
Sbjct: 938  GLSGAKGAAGLPGNSGSPGQIGIPGSPGLPGLKGDSGLPGQPGTSGPPGLKGSMGEMGLP 997

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK--------GMTGPRGNRGKSGINGVPGTPA 263
            G  G  G PG+ G PG  G PG +G  GEK        G+ G  G +G+ G NG PG+P 
Sbjct: 998  GPPGSKGSPGQPGRPGSAGSPGFSGLKGEKGEPGISGAGIPGFPGQKGEPGQNGFPGSPG 1057



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 90/171 (52%), Gaps = 31/171 (18%)

Query: 132 VKGERGEKGAPG--VVGPPGPQGIPGDEGKRG---------PKGDMGYPG------PQGI 174
           ++GE+G+ GAPG  + GPPG +G PG  G+RG          +G  G PG        G+
Sbjct: 803 IQGEKGDPGAPGFDMPGPPGDRGSPGFPGERGFTGPPGPPGAQGRDGLPGFSGAKGEMGV 862

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP------GRNGMDGIPGK------ 222
            G  G  GP G+ G PG  G  G DG PG+PGL G+P      G  G+ G PG+      
Sbjct: 863 MGPPGSVGPAGNPGNPGLPGSKGNDGNPGQPGLSGLPGAEGEKGERGLPGPPGRVDSANL 922

Query: 223 --DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
              G+ G+ G+PG++G +G KG  G  GN G  G  G+PG+P +   K +S
Sbjct: 923 QFKGVKGEPGLPGSSGLSGAKGAAGLPGNSGSPGQIGIPGSPGLPGLKGDS 973



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 88/186 (47%), Gaps = 23/186 (12%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------ 149
            L    G   +      PG  G  GQ G  G+ G  G+KG+ G  G PG  GPPG      
Sbjct: 933  LPGSSGLSGAKGAAGLPGNSGSPGQIGIPGSPGLPGLKGDSGLPGQPGTSGPPGLKGSMG 992

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR--IGLDGRDGLPGEPGL 207
              G+PG  G +G  G  G PG  G PG  G +G KG+ G  G    G  G+ G PG+ G 
Sbjct: 993  EMGLPGPPGSKGSPGQPGRPGSAGSPGFSGLKGEKGEPGISGAGIPGFPGQKGEPGQNGF 1052

Query: 208  DGIPGRNGMDGIPGKDGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G PG  G  G PG  GLPG           G PG+ G+ G KG+ GP GN      +G+
Sbjct: 1053 PGSPGSKGNPGNPGLPGLPGISGPKGDPGLPGFPGSPGSPGLKGVDGPTGN------SGL 1106

Query: 259  PGTPAI 264
            PG+P +
Sbjct: 1107 PGSPGL 1112



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 93/203 (45%), Gaps = 57/203 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G+ GE+   GE  +KGE+G+ G PG  G PG  G+PG +G        G PGP+
Sbjct: 538 GRPGPKGEPGEV--IGE--IKGEKGDPGFPGPAGSPGLDGVPGRDGT------PGIPGPK 587

Query: 173 GIPGD---EGKRGPKGDMGYPGRI-----------------------GLDGRDGLPGEPG 206
           G PG    +G RG  GD+G+PG                         G+ GR G PG PG
Sbjct: 588 GEPGGFALKGDRGFPGDIGFPGHPGDRGLMGPPGFGPSGPPGEKGIQGVSGRPGAPGIPG 647

Query: 207 LDGIPGRNGMD----------------GIPGKDGLPGKDGIPGTNGTNGEK-----GMTG 245
             G PG+  M+                G PG+ GLPG+ GIPG  G+ GE      G+ G
Sbjct: 648 PKGSPGQTVMEKGDFGPPGLPGIPGDAGTPGEPGLPGQPGIPGVPGSKGEPGIPGIGLPG 707

Query: 246 PRGNRGKSGINGVPGTPAICAYK 268
             G     G+ G+PG+P     K
Sbjct: 708 SAGGDPGFGLPGLPGSPGPAGLK 730



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 93/209 (44%), Gaps = 59/209 (28%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGE-------------KGAPGVVGPPGPQGIPGD 156
           C PGL G  G  G+ G  GE G KG++G+             KG PG+ G PG  G PG 
Sbjct: 450 CQPGLPGTQGLPGDPGFLGERGQKGDKGDTCYNCIGNGILGPKGDPGLPGFPGSPGSPGA 509

Query: 157 EGKRGPKG------------------DMGYPGPQGIPGDE-GK-RGPKGDMGYPGRIGLD 196
            G++G  G                    G PGP+G PG+  G+ +G KGD G+PG     
Sbjct: 510 PGQKGAMGIPGTNGLPGPPGFPGNPGISGRPGPKGEPGEVIGEIKGEKGDPGFPGPA--- 566

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK---- 252
                 G PGLDG+PGR+G  GIPG  G PG   + G  G  G+ G  G  G+RG     
Sbjct: 567 ------GSPGLDGVPGRDGTPGIPGPKGEPGGFALKGDRGFPGDIGFPGHPGDRGLMGPP 620

Query: 253 -------------SGINGVPGTPAICAYK 268
                         G++G PG P I   K
Sbjct: 621 GFGPSGPPGEKGIQGVSGRPGAPGIPGPK 649



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 65/150 (43%), Gaps = 22/150 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + GF  S       G+ GP G  G  G+ G  G  G  G +G PG  G PG  GIPG  
Sbjct: 1081 GLPGFPGSPGSPGLKGVDGPTGNSGLPGSPGLRGESGRPGPQGTPGEKGQPGQDGIPGPS 1140

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G    KG+ G PG                 G PG  GL G  G  G+ GL G PG  G+ 
Sbjct: 1141 GL---KGEPGLPG----------------FGSPGLPGLPGSQGQKGDAGLSGSPGNPGLP 1181

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G  G  G PG    PG  G  G+ G+ GPR
Sbjct: 1182 GFKGDQGFPGS---PGPQGPTGQPGLPGPR 1208



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 69/143 (48%), Gaps = 26/143 (18%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPG-------------------DEGKRGPKGDMGYP 169
           E G++G  G  GAPG+   PGP+G PG                   D G  G  G  G P
Sbjct: 630 EKGIQGVSGRPGAPGI---PGPKGSPGQTVMEKGDFGPPGLPGIPGDAGTPGEPGLPGQP 686

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G+PG +G+ G  G +G PG  G D   GLPG PG  G  G  G  G  G+ G PG  
Sbjct: 687 GIPGVPGSKGEPGIPG-IGLPGSAGGDPGFGLPGLPGSPGPAGLKGSQGPKGESGFPGSP 745

Query: 230 GIPGTNGTNGEKGMTGPRGNRGK 252
           G+PG  G +G     GP+G+ G+
Sbjct: 746 GLPGRAGFDGP---VGPKGDSGQ 765



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 76/182 (41%), Gaps = 42/182 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G+KG+ G  G  G  G +GE G PG   P    G+PG  G +G KGD G    
Sbjct: 1119 PGPQGTPGEKGQPGQDGIPGPSGLKGEPGLPGFGSP----GLPGLPGSQGQKGDAGL--- 1171

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------------- 206
             G PG+ G  G KGD G+PG  G  G  G PG PG                         
Sbjct: 1172 SGSPGNPGLPGFKGDQGFPGSPGPQGPTGQPGLPGPRTEGPKGDPGPVGPPGRPGYPGPP 1231

Query: 207  ----------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                        G  G  G  G PG+ GL G  G  G +G  G+ G  G  G +G  G+ 
Sbjct: 1232 GSEGPRGPPGDGGFKGEKGNPGFPGQPGLTGSKGEHGASGFPGDPGRPGLNGMKGDQGVP 1291

Query: 257  GV 258
            GV
Sbjct: 1292 GV 1293



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 92/232 (39%), Gaps = 76/232 (32%)

Query: 111 PPGLQGPIGQKG-----------------EIGAKGEMGVKGERGEKG---APGVVGPPGP 150
           PPG+ GP G +G                  +G  G  G+ GERG+KG    PG+  P   
Sbjct: 362 PPGITGPKGDRGFPGLQGPPGFPGTPGTSSVGPSGNPGLPGERGQKGDDGPPGISIP--- 418

Query: 151 QGIPGDEGKR-----------------GPK--GDMGYPGPQGIPGDEG---KRGPKGDMG 188
            G+PG EG                   GP      G PG QG+PGD G   +RG KGD G
Sbjct: 419 -GLPGSEGLAGPPGPPGLPGRPGTSAVGPAMVCQPGLPGTQGLPGDPGFLGERGQKGDKG 477

Query: 189 ----------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD--------------- 223
                       G  G  G  G PG PG  G PG+ G  GIPG +               
Sbjct: 478 DTCYNCIGNGILGPKGDPGLPGFPGSPGSPGAPGQKGAMGIPGTNGLPGPPGFPGNPGIS 537

Query: 224 GLPGKDGIPGT-----NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G PG  G PG       G  G+ G  GP G+ G  G+ G  GTP I   K E
Sbjct: 538 GRPGPKGEPGEVIGEIKGEKGDPGFPGPAGSPGLDGVPGRDGTPGIPGPKGE 589



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 93/258 (36%), Gaps = 109/258 (42%)

Query: 120 QKGEIGAKGEMG----------------VKGERGEKGAPGVVGPPGPQ---GIPGDEG-- 158
           QKGE G  G+ G                 KGE+GE G PG +G PG     G+PG EG  
Sbjct: 256 QKGEKGIPGDQGFPGERGPMGPPGPPGGAKGEKGEPGEPGKIGKPGKDGKIGLPGGEGFR 315

Query: 159 -------------KRGPKGDMGYP---------------GPQGIPGDEGKRGPKGDMGYP 190
                         +G KG+ G P               GP+G  G  G  GPKGD G+P
Sbjct: 316 GDPGLPGGPGRDGDKGQKGENGLPGPPGEVISRPGTGRVGPKGNTGPPGITGPKGDRGFP 375

Query: 191 G--------------RIGLDGRDGLPGEPGLDG--------IPGRNGMD----------- 217
           G               +G  G  GLPGE G  G        IPG  G +           
Sbjct: 376 GLQGPPGFPGTPGTSSVGPSGNPGLPGERGQKGDDGPPGISIPGLPGSEGLAGPPGPPGL 435

Query: 218 -----------------GIPGKDGLPGKDGIPGTNGTNGEKGMT----------GPRGNR 250
                            G+PG  GLPG  G  G  G  G+KG T          GP+G+ 
Sbjct: 436 PGRPGTSAVGPAMVCQPGLPGTQGLPGDPGFLGERGQKGDKGDTCYNCIGNGILGPKGDP 495

Query: 251 GKSGINGVPGTPAICAYK 268
           G  G  G PG+P     K
Sbjct: 496 GLPGFPGSPGSPGAPGQK 513



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 47/92 (51%), Gaps = 20/92 (21%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--------P 169
            G  GE G  G+ G+ G  G KG PG+ G     G+PG  G     GD G+        P
Sbjct: 674 AGTPGEPGLPGQPGIPGVPGSKGEPGIPG----IGLPGSAG-----GDPGFGLPGLPGSP 724

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
           GP G+   +G +GPKG+ G+PG  GL GR G 
Sbjct: 725 GPAGL---KGSQGPKGESGFPGSPGLPGRAGF 753


>gi|49794|emb|CAA79736.1| alpha-1 type-x collagen [Mus musculus]
          Length = 680

 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 81/144 (56%), Gaps = 6/144 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GP G  G  GAKGE G  G  GE G   +PG +GP GP+GIPG+ G  G KG++G  
Sbjct: 308 GQRGPAGLPGAPGAKGERGPAGHPGEPGLPGSPGNMGPQGPKGIPGNHGIPGAKGEIGLV 367

Query: 170 GPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GP G PG  G RGP G     GYPG  GL+G  G PG PG  G PG  G  G+ G  G  
Sbjct: 368 GPAGPPGARGARGPPGLDGKTGYPGEPGLNGPKGNPGLPGQKGDPGVGGTPGLRGPVGPV 427

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G+PG NG  G +G  G  G R
Sbjct: 428 GAKGVPGHNGEAGPRGEPGIPGTR 451



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/156 (41%), Positives = 85/156 (54%), Gaps = 14/156 (8%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP-----QGIPGDEGKRGPKGDMGYPGPQ 172
           IG+ G IG+ G+ G+ GE+G  G+PG+ GPPG      QG+PG  G+RGP          
Sbjct: 263 IGKPGAIGSPGQPGIPGEKGHPGSPGIAGPPGAPGFGKQGLPGLRGQRGP---------A 313

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG  G +G +G  G+PG  GL G  G  G  G  GIPG +G+ G  G+ GL G  G P
Sbjct: 314 GLPGAPGAKGERGPAGHPGEPGLPGSPGNMGPQGPKGIPGNHGIPGAKGEIGLVGPAGPP 373

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G  G+ G  G  G+ G+NG  G P +   K
Sbjct: 374 GARGARGPPGLDGKTGYPGEPGLNGPKGNPGLPGQK 409



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 60/115 (52%), Gaps = 6/115 (5%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
           G   S     P G +G  G  G  GAKGE+G+ G  G  GA G  GPPG     G PG+ 
Sbjct: 335 GLPGSPGNMGPQGPKGIPGNHGIPGAKGEIGLVGPAGPPGARGARGPPGLDGKTGYPGEP 394

Query: 158 GKRGPKGDMGYPGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
           G  GPKG+ G PG +G P   G  G RGP G +G  G  G +G  G  GEPG+ G
Sbjct: 395 GLNGPKGNPGLPGQKGDPGVGGTPGLRGPVGPVGAKGVPGHNGEAGPRGEPGIPG 449


>gi|348538417|ref|XP_003456688.1| PREDICTED: collagen alpha-1(XI) chain-like isoform 2 [Oreochromis
           niloticus]
          Length = 1835

 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 87/167 (52%), Gaps = 9/167 (5%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G         P G QGPIG  G  G KG  GV+G +G KG  G  G P   G  GD G 
Sbjct: 770 EGPAGEKGAQGPSGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFP---GFKGDMGI 826

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------ 213
           +G +G++G  GP+G  G EG +G  G  G  G IGL G  G  G PGL G PGR      
Sbjct: 827 KGDRGEIGLIGPRGEDGPEGPKGRAGPPGESGPIGLAGEKGKLGVPGLPGYPGRQGPKGS 886

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G  G PG +G  G  G  G +G  G++G TGPRG RG  G  G PG
Sbjct: 887 SGFPGFPGANGEKGARGTAGKSGPRGQRGPTGPRGARGARGPTGKPG 933



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 85/171 (49%), Gaps = 21/171 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G  G  G +G  G KG +G  G  G +G PGP+G+ G +G RG KG  G  G 
Sbjct: 755 PGLPGADGPPGHPGKEGPAGEKGAQGPSGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE 814

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---------PGEPGLDGIPGRNGMDGIPGK 222
            G PG +G  G KGD G  G IG  G DG          PGE G  G+ G  G  G+PG 
Sbjct: 815 DGFPGFKGDMGIKGDRGEIGLIGPRGEDGPEGPKGRAGPPGESGPIGLAGEKGKLGVPGL 874

Query: 223 DGLPGKD------GIPGTNGTNGEKGM------TGPRGNRGKSGINGVPGT 261
            G PG+       G PG  G NGEKG       +GPRG RG +G  G  G 
Sbjct: 875 PGYPGRQGPKGSSGFPGFPGANGEKGARGTAGKSGPRGQRGPTGPRGARGA 925



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 60/132 (45%), Gaps = 12/132 (9%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GP G  G+PG  G  GP G  G  GP G  G +G  GP+G +GYPG  G+ G        
Sbjct: 747 GPQGRSGLPGLPGADGPPGHPGKEGPAGEKGAQGPSGPQGPIGYPGPRGVKG-------- 798

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPGTP 262
             DG+ G  G  G  G+DG PG  G  G  G  GE G+ GPRG     G  G  G PG  
Sbjct: 799 -ADGVRGLKGSKGEKGEDGFPGFKGDMGIKGDRGEIGLIGPRGEDGPEGPKGRAGPPGES 857

Query: 263 AICAYKRESCSL 274
                  E   L
Sbjct: 858 GPIGLAGEKGKL 869



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 91/217 (41%), Gaps = 75/217 (34%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  G++G  GA G  G+ GE G KG  G  G PG   +PG++G R          
Sbjct: 601 PPGQPGKTGKRGRAGADGSRGMPGESGSKGDRGFDGLPG---LPGEKGHRGDPGPMGPPG 657

Query: 161 -----GPKGDMGYPGPQGIPGD------------------------EGKRGPKGDM---- 187
                G +G+ G  GP+G+ G+                        +G +GPKG+M    
Sbjct: 658 APGEDGQRGEDGEIGPRGLAGESGPRGLLGPRGPPGPPGSPGVAGVDGPQGPKGNMGPQG 717

Query: 188 --------GYPG---------------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                   G PG                 G  GR GLPG PG DG PG       PGK+G
Sbjct: 718 EPGPPGQQGIPGTQGLPGPQGPIGPPGEKGPQGRSGLPGLPGADGPPGH------PGKEG 771

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G+ G  G +G  G  G  GPRG +G  G+ G+ G+
Sbjct: 772 PAGEKGAQGPSGPQGPIGYPGPRGVKGADGVRGLKGS 808



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 63/134 (47%), Gaps = 9/134 (6%)

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPG 212
           ++G +G  G  G PG  G PG  GK GP G+ G  G  G  G  G PG  G+   DG+ G
Sbjct: 745 EKGPQGRSGLPGLPGADGPPGHPGKEGPAGEKGAQGPSGPQGPIGYPGPRGVKGADGVRG 804

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
             G  G  G+DG PG  G  G  G  GE G+ GPRG  G  G  G  G P       ES 
Sbjct: 805 LKGSKGEKGEDGFPGFKGDMGIKGDRGEIGLIGPRGEDGPEGPKGRAGPPG------ESG 858

Query: 273 SLLPNSETSQLLIP 286
            +    E  +L +P
Sbjct: 859 PIGLAGEKGKLGVP 872



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 62/120 (51%), Gaps = 12/120 (10%)

Query: 146 GPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           GPPGP G+ G  G  GP      KG+ G PGPQG  G +G  G  G  G  GR G DG  
Sbjct: 561 GPPGPMGLTGRSGPVGPPGISGLKGESGDPGPQGPRGTQGPPGQPGKTGKRGRAGADGSR 620

Query: 200 GLPGEPG------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G+PGE G       DG+PG  G  G  G  G  G  G PG +G  GE G  GPRG  G+S
Sbjct: 621 GMPGESGSKGDRGFDGLPGLPGEKGHRGDPGPMGPPGAPGEDGQRGEDGEIGPRGLAGES 680



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 83/232 (35%), Gaps = 84/232 (36%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP+G  G  G  G  G+ G +GE G PG  GP G QG PG  GK G +G  G  G +
Sbjct: 561 GPPGPMGLTGRSGPVGPPGISGLKGESGDPGPQGPRGTQGPPGQPGKTGKRGRAGADGSR 620

Query: 173 GIPGDEGKRGPKGDMGYPGRIGL------------------DGRDGLPGEPGLDGIPGRN 214
           G+PG+ G +G +G  G PG  G                   DG+ G  GE G  G+ G +
Sbjct: 621 GMPGESGSKGDRGFDGLPGLPGEKGHRGDPGPMGPPGAPGEDGQRGEDGEIGPRGLAGES 680

Query: 215 ---------------------GMDG---------------------IPGKD--------- 223
                                G+DG                     IPG           
Sbjct: 681 GPRGLLGPRGPPGPPGSPGVAGVDGPQGPKGNMGPQGEPGPPGQQGIPGTQGLPGPQGPI 740

Query: 224 ---------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                          GLPG DG PG  G  G  G  G +G  G  G  G PG
Sbjct: 741 GPPGEKGPQGRSGLPGLPGADGPPGHPGKEGPAGEKGAQGPSGPQGPIGYPG 792



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 65/157 (41%), Gaps = 27/157 (17%)

Query: 139 KGAPGVVGPPG------------PQGIP-------------GDEGKRGPKGDMGYPGPQG 173
           +G PG  G PG              G+P             G +G++GP         Q 
Sbjct: 491 QGPPGTTGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRFGGDGEKGPVVSAQEAQAQA 550

Query: 174 IPGDE--GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           I        RGP G MG  GR G  G  G+ G  G  G PG  G  G  G  G PGK G 
Sbjct: 551 ILSQARLAMRGPPGPMGLTGRSGPVGPPGISGLKGESGDPGPQGPRGTQGPPGQPGKTGK 610

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G +G +GM G  G++G  G +G+PG P    ++
Sbjct: 611 RGRAGADGSRGMPGESGSKGDRGFDGLPGLPGEKGHR 647



 Score = 46.2 bits (108), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  GPIG  GE   KG++GV G  G  G  G  G  G  G PG  G++G +G  G  G
Sbjct: 853 PPGESGPIGLAGE---KGKLGVPGLPGYPGRQGPKGSSGFPGFPGANGEKGARGTAGKSG 909

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           P+G  G  G RG +G  G  G+ G  G
Sbjct: 910 PRGQRGPTGPRGARGARGPTGKPGPKG 936



 Score = 46.2 bits (108), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 41/90 (45%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G+ G IG  GE G  G  G  G PG  GP G  G PG  G  G KG  G  G
Sbjct: 847 PKGRAGPPGESGPIGLAGEKGKLGVPGLPGYPGRQGPKGSSGFPGFPGANGEKGARGTAG 906

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
             G  G  G  GP+G  G  G  G  G  G
Sbjct: 907 KSGPRGQRGPTGPRGARGARGPTGKPGPKG 936



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 15/86 (17%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG--------- 161
           PPG  G  G+ G +G  G  G+KGE G+ G  G  G  GP G PG  GKRG         
Sbjct: 562 PPGPMGLTGRSGPVGPPGISGLKGESGDPGPQGPRGTQGPPGQPGKTGKRGRAGADGSRG 621

Query: 162 ------PKGDMGYPGPQGIPGDEGKR 181
                  KGD G+ G  G+PG++G R
Sbjct: 622 MPGESGSKGDRGFDGLPGLPGEKGHR 647



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 9/56 (16%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            KG+ G KGE+G  G  G++GPPG      ++G+   KGD G PGPQG PG +G  G
Sbjct: 1475 KGDPGSKGEKGHPGLIGLIGPPG------EQGE---KGDRGLPGPQGSPGGKGDSG 1521



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 73/175 (41%), Gaps = 40/175 (22%)

Query: 134 GERGEKGAPGVV-------------------------GPPGPQGIPGDEGKRGPKGDM-- 166
           G++GEKG P V+                         GPPG  G PGD G  G  G    
Sbjct: 455 GQKGEKGEPAVIEPGMLIEGPPGTPGPAGLPGPAGLQGPPGTTGDPGDRGPPGRPGLPGA 514

Query: 167 -GYPGPQG----IP---GDEGKRGP--KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G PGP G    +P   G +G++GP           I    R  + G PG  G+ GR+G 
Sbjct: 515 DGLPGPPGTMLMLPFRFGGDGEKGPVVSAQEAQAQAILSQARLAMRGPPGPMGLTGRSGP 574

Query: 217 DGIPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G PG  GL G+ G PG     GT G  G  G  G RG++G +G  G P     K
Sbjct: 575 VGPPGISGLKGESGDPGPQGPRGTQGPPGQPGKTGKRGRAGADGSRGMPGESGSK 629


>gi|395732594|ref|XP_002812713.2| PREDICTED: collagen alpha-1(III) chain isoform 1 [Pongo abelii]
          Length = 1394

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 74/128 (57%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGEMG  G  G  G  G  GPPGP G  G  G RG  G+ G  G +G PG  G+RG  G 
Sbjct: 395 KGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGI 454

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +GIPG  G  GE+G  GP
Sbjct: 455 PGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGP 514

Query: 247 RGNRGKSG 254
            G RG +G
Sbjct: 515 AGPRGAAG 522



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 90/221 (40%), Gaps = 72/221 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--------------------------- 144
           PGL+G  G  GE GA G MG +G  GE+G PG+                           
Sbjct: 281 PGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGT 340

Query: 145 ------------VGP---PGPQGIPGDEGKRGP---------------------KGDMGY 168
                       VGP   PG  G PG  G+ GP                     KG+MG 
Sbjct: 341 AGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGP 400

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIPGK 222
            G  G PG  G RGP G  G  G  GL G  G P      GEPG  G  G  G+ G+PG 
Sbjct: 401 AGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGA 460

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
            G  GKDG PG  G NG  G  G RG    RG +G NG+PG
Sbjct: 461 KGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPG 501



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 62/111 (55%), Gaps = 18/111 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGK 159
           PGL+G  G+ G+ GAKGE G +GERGE G PGV G             PG  G+PG  G+
Sbjct: 425 PGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGE 484

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           RG  G  G  GP GIPG+   +GP G+ G PG  G  G     GEPG DG+
Sbjct: 485 RGAPGFRGPAGPNGIPGE---KGPAGERGAPGPAGPRG---AAGEPGRDGV 529



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 88/214 (41%), Gaps = 63/214 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306

Query: 171 PQ---GIPGDEGKR---------------------------GPKGDMGYPGRIGLDGRDG 200
            +   G+PG  G R                           G KG++G  G  G +G  G
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG 366

Query: 201 LPGEP------------------------------GLDGIPGRNGMDGIP---GKDGLPG 227
             GEP                              G+ G PG  G  G P   G +G PG
Sbjct: 367 QRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPG 426

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G NG KG  GPRG RG++GI GVPG 
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGA 460



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 81/186 (43%), Gaps = 39/186 (20%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  G+ G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG+NG  G++G  GP+G+                  +G+ G  G+PG P
Sbjct: 348 GAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407

Query: 263 AICAYK 268
            +   +
Sbjct: 408 GLMGAR 413



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297



 Score = 39.7 bits (91), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 57/158 (36%), Gaps = 54/158 (34%)

Query: 121  KGEIGAKGEMGVKGER------------GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            KGE G  G  G+ GER            G  G PG  G PG  G+PG +G  G KGD G 
Sbjct: 905  KGESGKPGANGLNGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGE 964

Query: 169  PG------------------------------------------PQGIPGDEGKRGPKGD 186
             G                                           +G PG +G RG KG+
Sbjct: 965  NGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGE 1024

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G  G  G+ G  G PG PG  G PG  G  G  G  G
Sbjct: 1025 TGERGATGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPG 1062


>gi|322792823|gb|EFZ16656.1| hypothetical protein SINV_06590 [Solenopsis invicta]
          Length = 1695

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 86/151 (56%), Gaps = 6/151 (3%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           +G +G+ G+ G  G  G+PG+ G PG  G+ G++G  G +G +G+PG +G+ GDEG+RGP
Sbjct: 600 VGPQGKPGIPGLPGADGSPGLPGNPGTPGMKGEQGPPGSQGSIGFPGVRGVKGDEGQRGP 659

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            GD G  G  G++G     G+PG  G PG  G  GIPG +GL G  G     G  GE G+
Sbjct: 660 SGDRGEKGERGMEGEK---GDPGAKGEPGVTGPQGIPGLEGLEGPKGF---EGPRGETGL 713

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            G  G +GK GI G PG P     K +   L
Sbjct: 714 AGLLGEKGKMGIPGYPGYPGNPGEKGDKGQL 744



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/160 (43%), Positives = 91/160 (56%), Gaps = 9/160 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G  G  G  G  G+KGE+G  G+ G +G PG +G+ GDEG+RGP GD G  G 
Sbjct: 609 PGLPGADGSPGLPGNPGTPGMKGEQGPPGSQGSIGFPGVRGVKGDEGQRGPSGDRGEKGE 668

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGK 228
           +G+ G++G  G KG+ G  G  G+ G +GL G  G +G  G  G+ G+    GK G+PG 
Sbjct: 669 RGMEGEKGDPGAKGEPGVTGPQGIPGLEGLEGPKGFEGPRGETGLAGLLGEKGKMGIPGY 728

Query: 229 DGIPGTNGTNGEKGM------TGPRGNRGKSGINGVPGTP 262
            G PG  G  G+KG       +G +G RG SG+ G  G P
Sbjct: 729 PGYPGNPGEKGDKGQLGVQGPSGDKGERGNSGLQGERGVP 768



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 88/183 (48%), Gaps = 33/183 (18%)

Query: 108 EYCPPGLQGPIG------------QKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQG 152
           E  PPG QG IG            Q+G  G +GE G +G  GEKG PG  G P   GPQG
Sbjct: 632 EQGPPGSQGSIGFPGVRGVKGDEGQRGPSGDRGEKGERGMEGEKGDPGAKGEPGVTGPQG 691

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           IPG EG  GPK   G+ GP+G  G  G  G KG MG PG  G  G  G  G+ G  G+ G
Sbjct: 692 IPGLEGLEGPK---GFEGPRGETGLAGLLGEKGKMGIPGYPGYPGNPGEKGDKGQLGVQG 748

Query: 213 RNGMDGIPGKDGLPGKDGIP---------------GTNGTNGEKGMTGPRGNRGKSGING 257
            +G  G  G  GL G+ G+P               G  G  G+ G  GP G+ G+ G  G
Sbjct: 749 PSGDKGERGNSGLQGERGVPGPRGFRGTRGRRGAEGLPGPKGDTGQPGPAGSSGEVGPPG 808

Query: 258 VPG 260
           V G
Sbjct: 809 VEG 811



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 90/204 (44%), Gaps = 54/204 (26%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------- 157
           PPG++G   ++G IG  G  G KGERG  GAPG +G PG +G  G++             
Sbjct: 479 PPGMKG---EQGPIGLPGLPGDKGERGPSGAPGELGLPGHEGTQGEDGPPGLPGLPGELG 535

Query: 158 --GKRGPKGDMGYPGPQGIPGDEGKRGPKGD----------------------------- 186
             G  GP+G  G PG  GIPG EG  G KG+                             
Sbjct: 536 PRGFIGPRGFPGLPGNPGIPGSEGPPGVKGNAGPLGPPGAPGQPGPAGSIGQPGPQGPPG 595

Query: 187 -------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
                   G PG  GL G DG PG PG  G PG  G  G PG  G  G  G+ G  G  G
Sbjct: 596 PIGLVGPQGKPGIPGLPGADGSPGLPGNPGTPGMKGEQGPPGSQGSIGFPGVRGVKGDEG 655

Query: 240 EKGMTGPRGNRGKSGINGVPGTPA 263
           ++G +G RG +G+ G+ G  G P 
Sbjct: 656 QRGPSGDRGEKGERGMEGEKGDPG 679



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 94/218 (43%), Gaps = 54/218 (24%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
             + G      +   PG  G  G  GE G KG++GV+G  G+KG  G  G  G +G+PG 
Sbjct: 711 TGLAGLLGEKGKMGIPGYPGYPGNPGEKGDKGQLGVQGPSGDKGERGNSGLQGERGVPGP 770

Query: 157 ------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGL 201
                       EG  GPKGD G PGP G  G+ G  G +G  G+PG  GL   DG+DG+
Sbjct: 771 RGFRGTRGRRGAEGLPGPKGDTGQPGPAGSSGEVGPPGVEGPRGFPGPSGLPGLDGKDGI 830

Query: 202 PGEPGLDGIPGRN------------GMDGIPGKDGLPGKD------------GIPGTNGT 237
           PG PG  G  G +            G  G PG+ G PG+             G+PG  G 
Sbjct: 831 PGPPGERGPTGESGPPGPSGIPGVIGPSGPPGETGQPGESGPPGNPGAPGEIGLPGEQGK 890

Query: 238 NGEKGMTGPRG---------------NRGKSGINGVPG 260
            G  G  G  G                RG SG+ G+PG
Sbjct: 891 EGPPGPAGLMGLKGMPGPGGLPGFPGERGLSGLPGLPG 928



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 56/90 (62%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
            ++G  GA GE G+ G  G  GAPG++GP G +G  GD+G+R  KG  G PG  GI G++G
Sbjct: 1298 ERGFPGAAGENGLIGIPGAVGAPGIIGPIGTKGQKGDKGRRSIKGHRGEPGLVGIKGEQG 1357

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            KRG KGD G PG  G  G  G PG  GL G
Sbjct: 1358 KRGEKGDRGLPGTEGPKGNLGRPGNVGLRG 1387



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 88/204 (43%), Gaps = 57/204 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPK----- 163
           PG +G  GQ G  G+ GE+G  G  G +G PG  G PG     GIPG  G+RGP      
Sbjct: 786 PGPKGDTGQPGPAGSSGEVGPPGVEGPRGFPGPSGLPGLDGKDGIPGPPGERGPTGESGP 845

Query: 164 ----------------GDMGYPGPQ------------GIPGDEGKRGPKGDMGYPGRIGL 195
                           G+ G PG              G+PG++GK GP G  G    +GL
Sbjct: 846 PGPSGIPGVIGPSGPPGETGQPGESGPPGNPGAPGEIGLPGEQGKEGPPGPAGL---MGL 902

Query: 196 D---------------GRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGT 237
                           G  GLPG PGL G  G  G+ G PG  G+   PGKDG PG  G 
Sbjct: 903 KGMPGPGGLPGFPGERGLSGLPGLPGLKGEMGPVGLQGPPGDKGVQGEPGKDGPPGPEGK 962

Query: 238 NGEKGMTGPRGNRGKSGINGVPGT 261
            G KG  G  G RG+ G  G  G+
Sbjct: 963 QGHKGDKGNPGIRGEKGDPGPAGS 986



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 89/217 (41%), Gaps = 75/217 (34%)

Query: 119 GQKGEIGAKGEMGVKGERGE---------------------KGAPGVVGPPGPQGIPGDE 157
           GQKGE G  GE G++G+RG                       G PG+ G  GP G+PG  
Sbjct: 436 GQKGEPGEIGEPGLRGDRGSPGNPGREGRRGRPGRDGERGLSGPPGMKGEQGPIGLPGLP 495

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRG---------------------PKGDMGYPGRIGLD 196
           G +G +G  G PG  G+PG EG +G                     P+G  G PG  G+ 
Sbjct: 496 GDKGERGPSGAPGELGLPGHEGTQGEDGPPGLPGLPGELGPRGFIGPRGFPGLPGNPGIP 555

Query: 197 GRDGLPGEPG---------------------------------LDGIPGRNGMDGIPGKD 223
           G +G PG  G                                 L G  G+ G+ G+PG D
Sbjct: 556 GSEGPPGVKGNAGPLGPPGAPGQPGPAGSIGQPGPQGPPGPIGLVGPQGKPGIPGLPGAD 615

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G PGT G  GE+G  G +G+ G  G+ GV G
Sbjct: 616 GSPGLPGNPGTPGMKGEQGPPGSQGSIGFPGVRGVKG 652



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 79/169 (46%), Gaps = 36/169 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKG---------ERGEKGAPG 143
           +   QG         P G +GP G+    G +G KG+MG+ G         E+G+KG  G
Sbjct: 686 VTGPQGIPGLEGLEGPKGFEGPRGETGLAGLLGEKGKMGIPGYPGYPGNPGEKGDKGQLG 745

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD------------EGKRGPKGDMGYPG 191
           V GP          G +G +G+ G  G +G+PG             EG  GPKGD G PG
Sbjct: 746 VQGP---------SGDKGERGNSGLQGERGVPGPRGFRGTRGRRGAEGLPGPKGDTGQPG 796

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
             G  G  G PG  G  G PG +G+ G+ GKDG+PG    PG  G  GE
Sbjct: 797 PAGSSGEVGPPGVEGPRGFPGPSGLPGLDGKDGIPGP---PGERGPTGE 842



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 93/237 (39%), Gaps = 84/237 (35%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG---------------EKGAPGV---VGPPGPQGIP 154
           G+QGP G KGE   +G  G++GERG                +G PG     G PGP G  
Sbjct: 745 GVQGPSGDKGE---RGNSGLQGERGVPGPRGFRGTRGRRGAEGLPGPKGDTGQPGPAGSS 801

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGK---------RGPKGDM---------------GYP 190
           G+ G  G +G  G+PGP G+PG +GK         RGP G+                G P
Sbjct: 802 GEVGPPGVEGPRGFPGPSGLPGLDGKDGIPGPPGERGPTGESGPPGPSGIPGVIGPSGPP 861

Query: 191 GRIGLDGRD------------GLPGEPGLDGIPG---------------------RNGMD 217
           G  G  G              GLPGE G +G PG                       G+ 
Sbjct: 862 GETGQPGESGPPGNPGAPGEIGLPGEQGKEGPPGPAGLMGLKGMPGPGGLPGFPGERGLS 921

Query: 218 GIPGKDGLPGK------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+PG  GL G+       G PG  G  GE G  GP G  GK G  G  G P I   K
Sbjct: 922 GLPGLPGLKGEMGPVGLQGPPGDKGVQGEPGKDGPPGPEGKQGHKGDKGNPGIRGEK 978



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 55/109 (50%), Gaps = 21/109 (19%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---------------------KRGPKGDM 166
            G+ G KGE G  GAPG  GP GP G+PG  G                     +RGP+G  
Sbjct: 1063 GQRGSKGEVGPVGAPGAAGPVGPNGLPGQPGDKGEVGDPGVIGPIGPPGIPGERGPRGSK 1122

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            G  G +G PG EG++G KGD G PG +G  G +G+ GE G  G  G  G
Sbjct: 1123 GIKGAEGPPGPEGRQGEKGDSGTPGPLGKPGVEGIQGERGPPGTKGEEG 1171



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 91/248 (36%), Gaps = 83/248 (33%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
            G +GP G +G  G KG+ G  G  G+ G  G+ G  GP G  G+EGK             
Sbjct: 1126 GAEGPPGPEGRQGEKGDSGTPGPLGKPGVEGIQGERGPPGTKGEEGKMGLLGLPGLRGLT 1185

Query: 160  --RGPKGDM---------------------------------GYPGPQGIPGDEGKRGPK 184
               GPKGD                                  G PG  G+PG EG  GP 
Sbjct: 1186 GPEGPKGDAGLPGLPGPPGEPGLIGAKGELGKEGEEGRAGDPGVPGEAGLPGKEGLPGPP 1245

Query: 185  GDMGYPGRI---GLDGRDGLPGEPG------------------------------LDGIP 211
            G   Y   I   G  G  GLPGE G                                G  
Sbjct: 1246 GKPVYRKNIWPAGQQGNTGLPGEKGDIGLPGPPGLGGPIGPQGPPGLPGLPGERGFPGAA 1305

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G NG+ GIPG  G PG  G  GT G  G+KG    +G+RG+ G+ G+ G       K + 
Sbjct: 1306 GENGLIGIPGAVGAPGIIGPIGTKGQKGDKGRRSIKGHRGEPGLVGIKGEQGKRGEKGDR 1365

Query: 272  CSLLPNSE 279
               LP +E
Sbjct: 1366 G--LPGTE 1371



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 93/238 (39%), Gaps = 60/238 (25%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP-- 154
            V +QG          PG  GP G +G+ G KG+ G  G RGEKG PG  G  G  G+P  
Sbjct: 936  VGLQGPPGDKGVQGEPGKDGPPGPEGKQGHKGDKGNPGIRGEKGDPGPAGSVGRDGLPGS 995

Query: 155  ----------------GDEGKRGPKGDMGYPGPQGIP----------------------- 175
                            GD+G  GP G+ G+ G QG                         
Sbjct: 996  RGVPGPPGPVGFPGEDGDKGNIGPPGEKGFKGSQGDIGPPGPPGIQGPRGEFGAAGPPGE 1055

Query: 176  -------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------- 217
                   G  G +G  G +G PG  G  G +GLPG+PG  G  G  G+            
Sbjct: 1056 KGPPGEIGQRGSKGEVGPVGAPGAAGPVGPNGLPGQPGDKGEVGDPGVIGPIGPPGIPGE 1115

Query: 218  -GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
             G  G  G+ G +G PG  G  GEKG +G  G  GK G+ G+ G       K E   +
Sbjct: 1116 RGPRGSKGIKGAEGPPGPEGRQGEKGDSGTPGPLGKPGVEGIQGERGPPGTKGEEGKM 1173



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 96/212 (45%), Gaps = 51/212 (24%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKG---EIGAKGEMG------------VKGERGEKGA 141
            +  +G          PG  GP+G  G   + G KGE+G            + GERG +G+
Sbjct: 1062 IGQRGSKGEVGPVGAPGAAGPVGPNGLPGQPGDKGEVGDPGVIGPIGPPGIPGERGPRGS 1121

Query: 142  PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGR 198
             G+ G  GP   PG EG++G KGD G PGP G PG E   G+RGP G  G  G++GL G 
Sbjct: 1122 KGIKGAEGP---PGPEGRQGEKGDSGTPGPLGKPGVEGIQGERGPPGTKGEEGKMGLLGL 1178

Query: 199  DGLPGEPGLDGIPG------------------------------RNGMDGIPGKDGLPGK 228
             GL G  G +G  G                              R G  G+PG+ GLPGK
Sbjct: 1179 PGLRGLTGPEGPKGDAGLPGLPGPPGEPGLIGAKGELGKEGEEGRAGDPGVPGEAGLPGK 1238

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +G+PG  G    +    P G +G +G+ G  G
Sbjct: 1239 EGLPGPPGKPVYRKNIWPAGQQGNTGLPGEKG 1270



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 9/74 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PG+ GPIG KG+ G KG   +KG RGE      KG  G  G  G +G+PG E   GPKG+
Sbjct: 1320 PGIIGPIGTKGQKGDKGRRSIKGHRGEPGLVGIKGEQGKRGEKGDRGLPGTE---GPKGN 1376

Query: 166  MGYPGPQGIPGDEG 179
            +G PG  G+ G++G
Sbjct: 1377 LGRPGNVGLRGEQG 1390



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 55/110 (50%), Gaps = 12/110 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG------------ERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GL G  G++G  G  G MG+KG            ERG  G PG+ G  G  G  G +G  
Sbjct: 883 GLPGEQGKEGPPGPAGLMGLKGMPGPGGLPGFPGERGLSGLPGLPGLKGEMGPVGLQGPP 942

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           G KG  G PG  G PG EGK+G KGD G PG  G  G  G  G  G DG+
Sbjct: 943 GDKGVQGEPGKDGPPGPEGKQGHKGDKGNPGIRGEKGDPGPAGSVGRDGL 992



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            +G PG  G+    G +G PG  G PG  G  G KG  G  GR  + G     GEPGL GI
Sbjct: 1299 RGFPGAAGE---NGLIGIPGAVGAPGIIGPIGTKGQKGDKGRRSIKGHR---GEPGLVGI 1352

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G  G  G  G  GLPG +G  G  G  G  G+ G +G
Sbjct: 1353 KGEQGKRGEKGDRGLPGTEGPKGNLGRPGNVGLRGEQG 1390



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 76/152 (50%), Gaps = 27/152 (17%)

Query: 116 GPIGQKGEIGAKGE------------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GP G  GE G  GE            +G+ GE+G++      GPPGP G+ G +G  GP 
Sbjct: 856 GPSGPPGETGQPGESGPPGNPGAPGEIGLPGEQGKE------GPPGPAGLMGLKGMPGPG 909

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G+PG +G+ G  G  G KG+MG  G  G  G  G+ GEPG DG PG  G  G  G  
Sbjct: 910 GLPGFPGERGLSGLPGLPGLKGEMGPVGLQGPPGDKGVQGEPGKDGPPGPEGKQGHKGDK 969

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G P         G  GEKG  GP G+ G+ G+
Sbjct: 970 GNP---------GIRGEKGDPGPAGSVGRDGL 992


>gi|116326001|ref|NP_082046.2| collagen alpha-1(XXIV) chain precursor [Mus musculus]
 gi|341940379|sp|Q30D77.2|COOA1_MOUSE RecName: Full=Collagen alpha-1(XXIV) chain; Flags: Precursor
          Length = 1733

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 92/165 (55%), Gaps = 9/165 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYP 169
            G++GP G +G+ G +GE G KG+ G  G+ G  G PGP+   G PG+EG +G  G  G P
Sbjct: 1027 GVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAP 1086

Query: 170  GPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G  G+PG++G +G        G +G PG++GL G +G+ G PG  G  G+ G  G  G  
Sbjct: 1087 GGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPT 1146

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G PG+ G NG KG  G RG  G  G+ G  G P I  Y+
Sbjct: 1147 GEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMGPEGEPGIPGYR 1191



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 85/164 (51%), Gaps = 12/164 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G++G  GE G +G  G  G PG +G  GP G  GD G +G  G  G  GP
Sbjct: 993  PGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGP 1052

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------------GI 219
             G  G  G+ GP+G+ G PG  GL G+DGL G PG  G+PG +G              G 
Sbjct: 1053 AGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGR 1112

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            PG+ GLPG +GI GT G  G  G  G +G  G +G  G  G P 
Sbjct: 1113 PGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPG 1156



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 90/176 (51%), Gaps = 12/176 (6%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQ 151
              QG   S+ +  P G  GP G  G  G  GEMGV+G      + G +G PG  G  GP 
Sbjct: 994  GFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGPA 1053

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEP 205
            G  G  G+ GP+G+ G PG +G+ G +G +G  G  G PG  G  G  GLP      G P
Sbjct: 1054 GSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGRP 1113

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G+PG  G+ G PG+ G  GK G  G  G  GE G  GP G+ G++G  G  GT
Sbjct: 1114 GQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENGPKGARGT 1169



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/190 (41%), Positives = 98/190 (51%), Gaps = 20/190 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGD---M 166
            G QG  G KGE G +G+ G+ G  G+ G+PG   V G PG QG+PG  G  GP G+    
Sbjct: 955  GDQGGHGAKGEKGNQGKRGLPGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPR 1014

Query: 167  GYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLP-------GEPGLDGIPGRNGM 216
            G PG  G+PG+ G  GP   +GD G  G  G  G DG P       GEPG  G PG  G 
Sbjct: 1015 GLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKG-DGGPAGSAGATGEPGPRGEPGAPGE 1073

Query: 217  DGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
            +G+ GKDGL   PG  G+PG +G  GE G+ G  G  G+ G  G+PG   I     +   
Sbjct: 1074 EGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGR 1133

Query: 274  LLPNSETSQL 283
            L    +  Q+
Sbjct: 1134 LGKKGDKGQV 1143



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 82/155 (52%), Gaps = 3/155 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G  GE G +G+ G +G  G  G  G  G PGP+G+PG  G  G  G  G PG 
Sbjct: 975  PGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGT 1034

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            +G  G +G+ G KGD G  G  G  G     G PG PG +G+ G++G+ G PG  GLPG+
Sbjct: 1035 EGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGE 1094

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            DG  G  G  G  G  G  G  G  G  G+ GTP 
Sbjct: 1095 DGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPG 1129



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 80/160 (50%), Gaps = 33/160 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            KG MGV G RG        G  GP G PGD+G +GPKG+ G  GPQG      KRG  G 
Sbjct: 1246 KGHMGVPGLRG------ATGQQGPPGEPGDQGGQGPKGERGSEGPQG------KRGVPGP 1293

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGM 243
             G PG   + G  G PG  GL G PG +GM G PGK GLPGK    G+PG+ G  G  G 
Sbjct: 1294 SGKPG---IPGVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGS 1350

Query: 244  TGPRGN---------------RGKSGINGVPGTPAICAYK 268
             GP+G                +G+ G+ G PG P    ++
Sbjct: 1351 PGPQGGKGASGPPGSPGAPGPKGEQGLPGQPGVPGQRGHR 1390



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 87/175 (49%), Gaps = 12/175 (6%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGP---- 150
             +QG   +  +  P G  G  G+   +GE GA GE G++G+ G KGAPG  G PG     
Sbjct: 1039 GLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDK 1098

Query: 151  --QGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
               G+PG  G  G  G MG PGP+GI   PG  G+ G KGD G  G  G  G  G PG  
Sbjct: 1099 GEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSV 1158

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G +G  G  G  G  G  GL G +G PG  G  G +G  GP G  G  G  G PG
Sbjct: 1159 GENGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPG 1213



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 89/182 (48%), Gaps = 39/182 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QGP G+ G+ G +G  G +G  G +G  GV GP G  GIPG  G  GPKG  GYPG  
Sbjct: 1259 GQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGFPGPKGLQGYPGVD 1318

Query: 173  GI------PGDEGKRGPKGDMGYPGRIGL------------------------DGRDGLP 202
            G+      PG  GK+G  G  G PGR G+                         G  GLP
Sbjct: 1319 GMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGSPGPQGGKGASGPPGSPGAPGPKGEQGLP 1378

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT------GPRGNRGKSGIN 256
            G+P   G+PG+ G  G PG  GL G  G+ G  G +G++G+       GPRG  G +GI 
Sbjct: 1379 GQP---GVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGPEGDAGIV 1435

Query: 257  GV 258
            G+
Sbjct: 1436 GI 1437



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 94/204 (46%), Gaps = 54/204 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVK------------------------GERGEKGAPGVVGP 147
            PG +G +G+ G  G KGE+G +                        GE+GE+G+PG +GP
Sbjct: 843  PGRKGYMGEPGPEGLKGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPLGP 902

Query: 148  PGPQGI------------------PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGP 183
             G +G+                  PG  G R      GPKG  G  GP G+ GD+G  G 
Sbjct: 903  QGEKGVMGYPGPPGAPGPMGPLGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGA 962

Query: 184  KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGT 237
            KG+ G  G+ GL G  G  G PG  G+ G+ G  G+PG        G PG  G+PG  G 
Sbjct: 963  KGEKGNQGKRGLPGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGL 1022

Query: 238  NGEKGMTGPRGNRGKSGINGVPGT 261
             GE G+ GP G  G SG+ G PG 
Sbjct: 1023 PGEMGVEGPPGTEGDSGLQGEPGA 1046



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 95/203 (46%), Gaps = 36/203 (17%)

Query: 97   VAMQGFCNSTKEYCPPGL------QGPIGQKGEIGAKGEMGVKGERG------------- 137
            V  QG    T E  P GL       G IG+KGE G+ G +G +GE+G             
Sbjct: 861  VGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGP 920

Query: 138  -----------EKGAPGVVGPPG------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
                        +GAPG  GP G      P G+ GD+G  G KG+ G  G +G+PG  GK
Sbjct: 921  MGPLGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGLPGK 980

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
             G  G+ G  G+ G  G  G  G+ G  G PG  G+ GI G  G  G +G PGT G +G 
Sbjct: 981  AGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGL 1040

Query: 241  KGMTGPRGNRGKSGINGVPGTPA 263
            +G  G +G+ G +G  G  G P 
Sbjct: 1041 QGEPGAKGDGGPAGSAGATGEPG 1063



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 71/131 (54%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           +G  G+ G  G  G PG+ GP GP+G PG    +   G+ G PG  G+ G  G +G KG 
Sbjct: 531 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGAKGL 590

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G+PG  GL G  GLPG  G  G PG  G  G+ G +G PG  G+ G  G+ GE G  GP
Sbjct: 591 KGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGP 650

Query: 247 RGNRGKSGING 257
            G RG  G+ G
Sbjct: 651 EGERGTPGVRG 661



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 95/223 (42%), Gaps = 70/223 (31%)

Query: 111  PPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP----- 162
            P G+ G  GQ+G +G    KG++G  GE G +G PG VG  GP+G  G  G  GP     
Sbjct: 1121 PEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMG 1180

Query: 163  ----------KGDMGYPGPQGIPGDEGKRG-P---------------------------- 183
                      +G  G PGP G+PG +G++G P                            
Sbjct: 1181 PEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPPGEPGPMGEQGETGEH 1240

Query: 184  -----KGDMGYPGRIGLDGRDGLPGEP------------------GLDGIPGRNGMDGIP 220
                 KG MG PG  G  G+ G PGEP                  G  G+PG +G  GIP
Sbjct: 1241 GEEGYKGHMGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIP 1300

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G PG  G+ G  G +G  G  G  G  GK G+ GVPG+P 
Sbjct: 1301 GVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPG 1343



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 94/222 (42%), Gaps = 67/222 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYP 169
            G  G  G  GE G KGEMG+ G  G  G PG +G PGP+GI   PG  G+ G KGD G  
Sbjct: 1084 GAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQV 1143

Query: 170  GP------QGIPGDEGKRGPKGDMGYPGRI------GLDGRDGLP------GEPGLDGIP 211
            GP      +G PG  G+ GPKG  G  G +      G +G  G+P      G+PG  G+P
Sbjct: 1144 GPTGEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLP 1203

Query: 212  GRNGMDGIPGKD----------------------------------------------GL 225
            G  G  G PG+D                                              G 
Sbjct: 1204 GPKGEKGYPGEDSTVLGPPGPPGEPGPMGEQGETGEHGEEGYKGHMGVPGLRGATGQQGP 1263

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            PG+ G  G  G  GE+G  GP+G RG  G +G PG P +  +
Sbjct: 1264 PGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGF 1305



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 94/203 (46%), Gaps = 45/203 (22%)

Query: 97   VAMQGFCNSTKEYCPPGL------QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
            + + G   +T +  PPG       QGP G++G  G +G+ GV G  G+ G PGV G PGP
Sbjct: 1249 MGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGFPGP 1308

Query: 151  ---QGIPGDEGKRGPKGDMGYPGPQG---IPGDEGKRG---------------------- 182
               QG PG +G  G  G  G PG QG   +PG  G+ G                      
Sbjct: 1309 KGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGSPGPQGGKGASGPPGSPGA 1368

Query: 183  --PKGDMGYPGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
              PKG+ G PG+ G+ G+ G    PG+ GL G PG  G  G  G  GL G  G PG  G 
Sbjct: 1369 PGPKGEQGLPGQPGVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGP 1428

Query: 238  NGEKGMT------GPRGNRGKSG 254
             G+ G+       GP G RG +G
Sbjct: 1429 EGDAGIVGIVGPKGPIGQRGNTG 1451



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 80/149 (53%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G        GE+G+   PG++G  GP   PG +G +G KG  G PG 
Sbjct: 546 PGLPGPKGPKGDPGLSPGQAASGEKGD---PGLLGLVGP---PGLQGAKGLKGHPGLPGL 599

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G  G  G  G  G  GYPGR GL G +G PG  G+ G  G  G  G  G +G  G  G+
Sbjct: 600 RGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGPEGERGTPGV 659

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G +G  G  G+RG +G++G PG
Sbjct: 660 RGKKGPKGRQGFPGDFGDRGPAGLDGSPG 688



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 84/193 (43%), Gaps = 51/193 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
           GL GP G +G  G KG  G+ G RGE G PG+ G  G  G PG +G  GP+G+       
Sbjct: 577 GLVGPPGLQGAKGLKGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVR 636

Query: 166 -----------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG-------- 206
                      +G  G +G PG  GK+GPKG  G+PG  G  G  GL G PG        
Sbjct: 637 GFIGSPGEVGQLGPEGERGTPGVRGKKGPKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPP 696

Query: 207 -------------------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                                    L G  G +G+ G  G+ G+ G+ G PG  G  G  
Sbjct: 697 GFPGVTGSVGPAGPTGPPGAPGPMGLSGSRGPSGIKGDKGEQGVAGEPGEPGYPGDKGNI 756

Query: 242 GMTGPRGNRGKSG 254
           G  GP G RGKSG
Sbjct: 757 GSPGPPGIRGKSG 769



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 87/165 (52%), Gaps = 24/165 (14%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IG  GE+G +G+ G KG    +G PGP+G+ G+ G +G  G  G  GP G
Sbjct: 821 LKGTQGEEGPIGPFGELGSRGKPGRKG---YMGEPGPEGLKGEVGDQGDIGKTGETGPVG 877

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGE---------------PGLDGIPGRNG 215
           +PG+    G  G KG+ G PG +G  G  G+ G                PGL G  G  G
Sbjct: 878 LPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPLGLPGLVGARGAPG 937

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+ G  G DG+ G  G +G KG    +GN+GK G+ G+PG
Sbjct: 938 SPGPKGQRGPRGPDGLAGDQGGHGAKGE---KGNQGKRGLPGLPG 979



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 15/117 (12%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------------PGRIGLDGRDGLPGEPG 206
           KRGP+G  G  G  G+PG  G +GPKGD G             PG +GL G  GL G  G
Sbjct: 530 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGAKG 589

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           L G P   G+ G+ G+ GLPG  G  G+ G  G +G+ GP GN G  G+ G  G+P 
Sbjct: 590 LKGHP---GLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPG 643



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 88/188 (46%), Gaps = 48/188 (25%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGI---------------- 153
           G +GP G KG+   KGE GV GE GE G PG    +G PGP GI                
Sbjct: 724 GSRGPSGIKGD---KGEQGVAGEPGEPGYPGDKGNIGSPGPPGIRGKSGPSGQPGDPGPQ 780

Query: 154 -----------------PGDEGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRI 193
                            PG  G  GPKG +G    PGP G+ G +G+ GP G  G  G  
Sbjct: 781 GPSGPPGPEGFPGDIGIPGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEGPIGPFGELGSR 840

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGMTGPR 247
           G  GR G  GEPG +G+ G  G  G  GK       GLPG+ GI G+ G  GE+G  GP 
Sbjct: 841 GKPGRKGYMGEPGPEGLKGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPL 900

Query: 248 GNRGKSGI 255
           G +G+ G+
Sbjct: 901 GPQGEKGV 908



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 83/180 (46%), Gaps = 33/180 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G KG +G +G  G   +KG +GE+G      P GP G  G  GK G KG MG 
Sbjct: 798 PGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEG------PIGPFGELGSRGKPGRKGYMGE 851

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP+G+      +G  GD G  G+ G  G  GLPGE G+ G  G  G  G PG  G  G+
Sbjct: 852 PGPEGL------KGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGE 905

Query: 229 DGI------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+                  PG  G  G  G  GP+G RG  G +G+ G       K E
Sbjct: 906 KGVMGYPGPPGAPGPMGPLGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGE 965



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 97/249 (38%), Gaps = 75/249 (30%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGI 153
           +   G+        P G  G  G +G IG+ GE+G  G  GE+G PGV G  GP   QG 
Sbjct: 612 IGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGPEGERGTPGVRGKKGPKGRQGF 671

Query: 154 PGDEGKRGPKGDMGYPG---------------------------------------PQGI 174
           PGD G RGP G  G PG                                       P GI
Sbjct: 672 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGVTGSVGPAGPTGPPGAPGPMGLSGSRGPSGI 731

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------------------- 208
            GD+G++G  G+ G PG  G  G  G PG PG+                           
Sbjct: 732 KGDKGEQGVAGEPGEPGYPGDKGNIGSPGPPGIRGKSGPSGQPGDPGPQGPSGPPGPEGF 791

Query: 209 ----GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGT 261
               GIPG+NG +G  G  G  G  G PG  GT GE+G  GP    G+RGK G  G  G 
Sbjct: 792 PGDIGIPGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEGPIGPFGELGSRGKPGRKGYMGE 851

Query: 262 PAICAYKRE 270
           P     K E
Sbjct: 852 PGPEGLKGE 860



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 6/85 (7%)

Query: 121  KGEIGAKGEMGVKGERGEKGAP---GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            KGE G  G+ GV G+RG +G P   G+ G PG +G PG+ G +G  G  G+PGP+G  GD
Sbjct: 1372 KGEQGLPGQPGVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGPEGD 1431

Query: 178  E---GKRGPKGDMGYPGRIGLDGRD 199
                G  GPKG +G  G  G  GR+
Sbjct: 1432 AGIVGIVGPKGPIGQRGNTGPLGRE 1456



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            KGE+G  G PGV G  G +G PGD+G R      G PG +G PG+ G +G  G  G+PG 
Sbjct: 1372 KGEQGLPGQPGVPGQRGHRGTPGDQGLR------GAPGLKGQPGEHGDQGLAGFQGFPGP 1425

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
             G +G  G+ G  G  G  G+ G  G  G++
Sbjct: 1426 RGPEGDAGIVGIVGPKGPIGQRGNTGPLGRE 1456


>gi|449483549|ref|XP_004174788.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-2(IV) chain
           [Taeniopygia guttata]
          Length = 1726

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 86/157 (54%), Gaps = 14/157 (8%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G++G+ GV G  G KGA G  G PGP G PG  G RG  G  G+PGP G  G  G RGP 
Sbjct: 701 GSQGKPGVPGATGAKGARGFPGDPGPMGFPGLNGTRGDPGREGFPGPPGFTGPRGDRGPN 760

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPG---------RN--GMDGIPGKDGLPGKDGIPG 233
           G  G  G  GL G+ G PG PG  G+PG         R   G+ G PG  G PG  G+PG
Sbjct: 761 GLPGLQGHPGLTGKSGAPGAPGPKGLPGDVFGAAAGSRGDVGLPGFPGLKGAPGDQGVPG 820

Query: 234 TNGTNGEKGMTGPRGN---RGKSGINGVPGTPAICAY 267
           T G +G  G+ GP+G+   +G  G+ G+PGTP    +
Sbjct: 821 TRGADGSPGLPGPKGDPGPQGLPGLTGLPGTPGTHGF 857



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 104/236 (44%), Gaps = 47/236 (19%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEI--------------------GAKGEMGVKGE 135
           L  +QG    T +   PG  GP G  G++                    GA G+ GV G 
Sbjct: 762 LPGLQGHPGLTGKSGAPGAPGPKGLPGDVFGAAAGSRGDVGLPGFPGLKGAPGDQGVPGT 821

Query: 136 RGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGP------------QGIPGDEGK 180
           RG  G+PG+ GP   PGPQG+PG  G  G  G  G+PGP            QG  G  G 
Sbjct: 822 RGADGSPGLPGPKGDPGPQGLPGLTGLPGTPGTHGFPGPPGNRGPDGGPGSQGPLGPPGA 881

Query: 181 RGPKGDMGYPGRIGLD---------GRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGK 228
           RG  G+ G+PG +GL          G  GLPG  G+ G PG +GMDG P   G  G PG 
Sbjct: 882 RGEDGEQGFPGPVGLKGLSGDKGDMGHTGLPGIRGVTGPPGISGMDGFPGDKGSRGSPGI 941

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLL 284
           DG  G  G  G  G+ G +G  G  G  G  G+     +K +     P  E  +L+
Sbjct: 942 DGFKGMTGLKGRPGLKGVKGEFGPLGARGDKGSQGARGFKGDRGDQGPPGEPPKLM 997



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 100/209 (47%), Gaps = 36/209 (17%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L   QG   S  +   PGL GP GQ+G  G  G  G KG  G  G PG  G PG +GI G
Sbjct: 1153 LKGTQGVPGSVGQEGLPGLVGPPGQQGNPGTPGLRGQKGAPGWPGLPGQAGQPGFRGISG 1212

Query: 156  DEGKRGPKGDMGYPGP-----QGIPGD-------------EGKRGPKGDMG------YPG 191
              G  G KG  G PGP      G PG              EG RGP G  G       PG
Sbjct: 1213 LHGLPGTKGLPGSPGPDGYGSAGFPGAVGDKGEAGEPSRVEGSRGPPGQKGERGVPGVPG 1272

Query: 192  RIGLDGRDGLPGEPGLD---GIPGRNG---MDGIPGKDGLPGKDGI---PGTNGTNGEKG 242
              G+ G++G PG PG+    G PG  G   +DG+PG  G  G+ GI   PG+ G +GE G
Sbjct: 1273 SFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGPQGQPGIPAPPGSKGESGEAG 1332

Query: 243  MT---GPRGNRGKSGINGVPGTPAICAYK 268
             T   GP+G+RG  G++G PG P     K
Sbjct: 1333 RTGEIGPKGSRGDPGLSGRPGLPGFPGPK 1361



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 94/188 (50%), Gaps = 27/188 (14%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEI-------GAKGEMGVKGERG------------EKG 140
            +G    +  +  PG  G IG +G+        G KGE+GV G  G            + G
Sbjct: 1087 KGIPGISGHFGTPGSHGEIGDRGDTINLPGMPGLKGEVGVPGLTGIRGGVGPKGEGGDPG 1146

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
             PG+ G  G QG+PG  G+ G  G +G PG QG PG  G RG KG  G+PG  G  G+ G
Sbjct: 1147 FPGIEGLKGTQGVPGSVGQEGLPGLVGPPGQQGNPGTPGLRGQKGAPGWPGLPGQAGQPG 1206

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE-------KGMTGPRGNRGKS 253
              G  GL G+PG  G+ G PG DG  G  G PG  G  GE       +G  GP G +G+ 
Sbjct: 1207 FRGISGLHGLPGTKGLPGSPGPDGY-GSAGFPGAVGDKGEAGEPSRVEGSRGPPGQKGER 1265

Query: 254  GINGVPGT 261
            G+ GVPG+
Sbjct: 1266 GVPGVPGS 1273



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 88/188 (46%), Gaps = 38/188 (20%)

Query: 113 GLQGPIGQKGEI--GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY-- 168
           GL G  G  G++  G  G+ G  GE G KG PG  G PG +G PG +G RGP GD G   
Sbjct: 596 GLPGQPGLPGDVIRGFPGDPGYPGELGPKGFPGEAGLPG-EGFPGPKGFRGPPGDQGQAG 654

Query: 169 ----PGPQGIPGDEGK-----------------------------RGPKGDMGYPGRIGL 195
               PG  G+PG+ G+                             +G +G  G PG  G 
Sbjct: 655 NPGSPGLPGLPGEPGQLDCGQVIEDFPRGDATEPIWSGAGCVRPPKGSQGKPGVPGATGA 714

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  G PG+PG  G PG NG  G PG++G PG  G  G  G  G  G+ G +G+ G +G 
Sbjct: 715 KGARGFPGDPGPMGFPGLNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGK 774

Query: 256 NGVPGTPA 263
           +G PG P 
Sbjct: 775 SGAPGAPG 782



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 75/154 (48%), Gaps = 27/154 (17%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           KG+ G  G+ G  GPPG  GIPG +G +G KG+ GYPG           GPKG++G  G 
Sbjct: 73  KGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGERGYPG---------ITGPKGEVGQRGV 123

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGI------PGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G  G DG+PG PG  G  G+ G DG       PG  G PG  G PG+ G  G KG  G 
Sbjct: 124 TGFPGADGIPGHPGQPGPRGKPGHDGCNGTAGDPGDSGTPGLSGFPGSIGVQGPKGQKGE 183

Query: 247 ------------RGNRGKSGINGVPGTPAICAYK 268
                       RG+ G SGI G PG P     +
Sbjct: 184 PYIVAPEIIRQYRGDPGDSGIIGFPGPPGTLGIQ 217



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/144 (46%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGDMGYPGPQ 172
            G +G  G KGE GV G  G  G PG  G PGP GI      PGD+G  G  G  GYPGPQ
Sbjct: 1254 GSRGPPGQKGERGVPGVPGSFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGPQ 1313

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G PG     G KG+ G  GR G  G  G  G+PGL G PG  G  G  G  G  G  G  
Sbjct: 1314 GQPGIPAPPGSKGESGEAGRTGEIGPKGSRGDPGLSGRPGLPGFPGPKGPRGEQGVIGFM 1373

Query: 233  GTNGTNGEKGMTGPRGNRGKSGIN 256
            GT G  G+ G  GP+G+RG +G  
Sbjct: 1374 GTVGFPGDLGPIGPKGDRGVTGFQ 1397



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 77/165 (46%), Gaps = 26/165 (15%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD--EG 158
           GF     +  P GL G  G  G  G  G  G                PGP+G+PGD    
Sbjct: 749 GFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGA---------------PGPKGLPGDVFGA 793

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNG 215
             G +GD+      G+PG  G +G  GD G PG  G DG  GLP   G+PG  G+PG  G
Sbjct: 794 AAGSRGDV------GLPGFPGLKGAPGDQGVPGTRGADGSPGLPGPKGDPGPQGLPGLTG 847

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G PG  G PG  G  G +G  G +G  GP G RG+ G  G PG
Sbjct: 848 LPGTPGTHGFPGPPGNRGPDGGPGSQGPLGPPGARGEDGEQGFPG 892



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 88/172 (51%), Gaps = 28/172 (16%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
             G KG+IGAKG  GVKG  G  G+PG+ G PG  G+ G++G  G  G  G PG  G  GD
Sbjct: 1048 AGVKGDIGAKGLTGVKGYPGPAGSPGIRGFPGTTGVRGEKGIPGISGHFGTPGSHGEIGD 1107

Query: 178  EGKR-------GPKGDMGYPGRIGL------------DGRDGLPGEPGLDGIPGRNGMDG 218
             G         G KG++G PG  G+             G  G+ G  G  G+PG  G +G
Sbjct: 1108 RGDTINLPGMPGLKGEVGVPGLTGIRGGVGPKGEGGDPGFPGIEGLKGTQGVPGSVGQEG 1167

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKG---------MTGPRGNRGKSGINGVPGT 261
            +PG  G PG+ G PGT G  G+KG           G  G RG SG++G+PGT
Sbjct: 1168 LPGLVGPPGQQGNPGTPGLRGQKGAPGWPGLPGQAGQPGFRGISGLHGLPGT 1219



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 60/110 (54%), Gaps = 3/110 (2%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  QGF         PG+QGP G KGE G  G  G KGE G++   GV G PG  GIPG
Sbjct: 78  LLGSQGFTGPPGLMGIPGVQGPKGHKGERGYPGITGPKGEVGQR---GVTGFPGADGIPG 134

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
             G+ GP+G  G+ G  G  GD G  G  G  G+PG IG+ G  G  GEP
Sbjct: 135 HPGQPGPRGKPGHDGCNGTAGDPGDSGTPGLSGFPGSIGVQGPKGQKGEP 184



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 83/187 (44%), Gaps = 32/187 (17%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP-------GDEGKRGPKGDM 166
            ++G  G  GE G KG  G+KG +G  G PG  G PG  G P       GD G +G  G  
Sbjct: 1004 VKGEKGDAGERGTKGSFGLKGSKGMPGLPGKTGTPGSPGHPSYVAGVKGDIGAKGLTGVK 1063

Query: 167  GYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDG----------LPGEPGLDGI 210
            GYPGP      +G PG  G RG KG  G  G  G  G  G          LPG PGL G 
Sbjct: 1064 GYPGPAGSPGIRGFPGTTGVRGEKGIPGISGHFGTPGSHGEIGDRGDTINLPGMPGLKGE 1123

Query: 211  PGRNGMDGI---------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G+ GI          G  G PG +G+ GT G  G  G  G  G  G  G  G PGT
Sbjct: 1124 VGVPGLTGIRGGVGPKGEGGDPGFPGIEGLKGTQGVPGSVGQEGLPGLVGPPGQQGNPGT 1183

Query: 262  PAICAYK 268
            P +   K
Sbjct: 1184 PGLRGQK 1190



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 101/254 (39%), Gaps = 104/254 (40%)

Query: 112 PGLQGPIGQKGEIGA----KGEMGVKGE----------------------RGEKGAPGVV 145
           PG  GP G+KGEIG+     G  G+ G+                      +G +G PG  
Sbjct: 414 PGEMGPKGEKGEIGSPAFFAGPPGIPGKDGSPGIRGPPGPIGAPGPLFGLKGREGTPGRF 473

Query: 146 GPPGPQGIPGDEGKRGPKGD-----------------------------------MGYP- 169
              G QG PG  G++GPKG+                                    G P 
Sbjct: 474 ---GIQGFPGPRGQKGPKGEEGDCTICLLGEELRRGSTGPRGPPGFPGTPGQPGIKGEPG 530

Query: 170 --GPQGIPGDEGKRGPKGDMGYPGR---------------IGLDGRDGLPGEPGLDGIPG 212
             GP G+PG  G +G  G  G+PG+                G+ G  GLPG  G DG PG
Sbjct: 531 DQGPHGLPGYPGAKGFSGPAGFPGQKGEKGDSLHITTKGTKGIRGDPGLPGIRGEDGFPG 590

Query: 213 RNGMDGIPGKDGLP-----------------GKDGIPGTNGTNGE-----KGMTGPRGNR 250
           R+G+DG+PG+ GLP                 G  G PG  G  GE     KG  GP G++
Sbjct: 591 RDGLDGLPGQPGLPGDVIRGFPGDPGYPGELGPKGFPGEAGLPGEGFPGPKGFRGPPGDQ 650

Query: 251 GKSGINGVPGTPAI 264
           G++G  G PG P +
Sbjct: 651 GQAGNPGSPGLPGL 664



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 83/185 (44%), Gaps = 27/185 (14%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            +  M GF         PG+ G  G  G  G  G  GVKGE G  GA G  G  G +G  G
Sbjct: 923  ISGMDGFPGDKGSRGSPGIDGFKGMTGLKGRPGLKGVKGEFGPLGARGDKGSQGARGFKG 982

Query: 156  DEGKRGPKGDMGYPGPQGIP----------GDEGKRGPKGDMGYPGR---IGLDGRDGLP 202
            D G +GP G+     P+ +P          GD G+RG KG  G  G     GL G+ G P
Sbjct: 983  DRGDQGPPGEP----PKLMPSMMMEVKGEKGDAGERGTKGSFGLKGSKGMPGLPGKTGTP 1038

Query: 203  GEPGLD----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G PG            G  G  G+ G PG  G PG  G PGT G  GEKG+ G  G+ G 
Sbjct: 1039 GSPGHPSYVAGVKGDIGAKGLTGVKGYPGPAGSPGIRGFPGTTGVRGEKGIPGISGHFGT 1098

Query: 253  SGING 257
             G +G
Sbjct: 1099 PGSHG 1103



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 77/159 (48%), Gaps = 25/159 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+  P G KGE G  G  G  G +G +G PG+ G PG  G PG +G RG +G +G+ G 
Sbjct: 1316 PGIPAPPGSKGESGEAGRTGEIGPKGSRGDPGLSGRPGLPGFPGPKGPRGEQGVIGFMGT 1375

Query: 172  QGIPGDEGKRGPKGD-------------------------MGYPGRIGLDGRDGLPGEPG 206
             G PGD G  GPKGD                          G PG  G  G  G PG+ G
Sbjct: 1376 VGFPGDLGPIGPKGDRGVTGFQGPPGSPGLPPLPPRLVAEQGSPGPRGNIGPQGSPGDMG 1435

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              G PG  G  G PG+ GL G+ GIP   G+ GE+G  G
Sbjct: 1436 PQGPPGDPGSRGSPGEPGLQGRGGIPAPPGSRGEQGGMG 1474



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 87/188 (46%), Gaps = 46/188 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG---------------EKGAPGVVGPPGPQG-IPGD 156
           G+ G  GQ+G  G  G  G+ GERG                KG PG +GPPGP    P  
Sbjct: 308 GVMGYPGQRGLPGITGFPGLSGERGIPGFDGPPGGHGPRGSKGEPGEMGPPGPDSYFPSR 367

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG-RDGLPGE----------- 204
             ++G +GD G+PG  G+PGD G+ G +G  G PG    DG + GLPGE           
Sbjct: 368 IPRKGARGDPGFPGVSGLPGDRGEEGDRGLPGLPGFSDADGDKPGLPGEMGPKGEKGEIG 427

Query: 205 -----PGLDGIPGRNGMDGIPGKD----------GLPGKDGIPGTNGTNGEKGMTGPRGN 249
                 G  GIPG++G  GI G            GL G++G PG  G    +G  GPRG 
Sbjct: 428 SPAFFAGPPGIPGKDGSPGIRGPPGPIGAPGPLFGLKGREGTPGRFGI---QGFPGPRGQ 484

Query: 250 RGKSGING 257
           +G  G  G
Sbjct: 485 KGPKGEEG 492



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 82/184 (44%), Gaps = 55/184 (29%)

Query: 119 GQKGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQGIPGDEG-------------- 158
           G++G+ G +GE G+ G      E+GE+G   V+G PG +G+PG  G              
Sbjct: 281 GERGDPGPRGEAGIPGVLLFPPEKGEEG---VMGYPGQRGLPGITGFPGLSGERGIPGFD 337

Query: 159 ----------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                      +G  G+MG PGP              D  +P RI   G  G PG PG+ 
Sbjct: 338 GPPGGHGPRGSKGEPGEMGPPGP--------------DSYFPSRIPRKGARGDPGFPGVS 383

Query: 209 GIPGRNGMDGIPGKDGLPG-------KDGIPGTNGTNGEKGMTG-PRGNRGKSGINGVPG 260
           G+PG  G +G  G  GLPG       K G+PG  G  GEKG  G P    G  GI G  G
Sbjct: 384 GLPGDRGEEGDRGLPGLPGFSDADGDKPGLPGEMGPKGEKGEIGSPAFFAGPPGIPGKDG 443

Query: 261 TPAI 264
           +P I
Sbjct: 444 SPGI 447



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 93/242 (38%), Gaps = 67/242 (27%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L  + G   +     PPG +GP G  G  G  G  G +GE GE+G PG VG  G  G  G
Sbjct: 845  LTGLPGTPGTHGFPGPPGNRGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDKG 904

Query: 156  DEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGL-------- 201
            D G  G  G  G  GP GI      PGD+G RG  G  G+ G  GL GR GL        
Sbjct: 905  DMGHTGLPGIRGVTGPPGISGMDGFPGDKGSRGSPGIDGFKGMTGLKGRPGLKGVKGEFG 964

Query: 202  -------------------------PGEP---------------GLDGIPGRNGMDGIPG 221
                                     PGEP               G  G  G  G  G+ G
Sbjct: 965  PLGARGDKGSQGARGFKGDRGDQGPPGEPPKLMPSMMMEVKGEKGDAGERGTKGSFGLKG 1024

Query: 222  KD---GLPGKDGIPGTNGTN----------GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                 GLPGK G PG+ G            G KG+TG +G  G +G  G+ G P     +
Sbjct: 1025 SKGMPGLPGKTGTPGSPGHPSYVAGVKGDIGAKGLTGVKGYPGPAGSPGIRGFPGTTGVR 1084

Query: 269  RE 270
             E
Sbjct: 1085 GE 1086



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 75/167 (44%), Gaps = 34/167 (20%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQG-IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           +KGE G             +GPPGP    P    ++G +GD G+PG  G+PGD G+ G +
Sbjct: 348 SKGEPGE------------MGPPGPDSYFPSRIPRKGARGDPGFPGVSGLPGDRGEEGDR 395

Query: 185 GDMGYPGRIGLDG-RDGLPGEPGLDGIPGR-------NGMDGIPGKDGLPGKD------- 229
           G  G PG    DG + GLPGE G  G  G         G  GIPGKDG PG         
Sbjct: 396 GLPGLPGFSDADGDKPGLPGEMGPKGEKGEIGSPAFFAGPPGIPGKDGSPGIRGPPGPIG 455

Query: 230 ------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                 G+ G  GT G  G+ G  G RG+ G  G  G   IC    E
Sbjct: 456 APGPLFGLKGREGTPGRFGIQGFPGPRGQKGPKGEEGDCTICLLGEE 502



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 58/112 (51%), Gaps = 3/112 (2%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMG 167
            PPG+    G  G+ G+ G  GV G  G +G PG+  PPG +G  G+ G+ G   PKG  G
Sbjct: 1285 PPGISNISGYPGDKGSPGLDGVPGYPGPQGQPGIPAPPGSKGESGEAGRTGEIGPKGSRG 1344

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             PG  G PG  G  GPKG  G  G IG  G  G PG+ G  G  G  G+ G 
Sbjct: 1345 DPGLSGRPGLPGFPGPKGPRGEQGVIGFMGTVGFPGDLGPIGPKGDRGVTGF 1396



 Score = 42.7 bits (99), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 4/124 (3%)

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           Y G  G+ G +G  GP G MG PG  G  G  G  G PG+ G  G  G  G+    G PG
Sbjct: 72  YKGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGERGYPGITGPKGEVGQRGV---TGFPG 128

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ-LLIP 286
            DGIPG  G  G +G  G  G  G +G  G  GTP +  +        P  +  +  ++ 
Sbjct: 129 ADGIPGHPGQPGPRGKPGHDGCNGTAGDPGDSGTPGLSGFPGSIGVQGPKGQKGEPYIVA 188

Query: 287 PTIV 290
           P I+
Sbjct: 189 PEII 192


>gi|351699253|gb|EHB02172.1| Collagen alpha-1(XI) chain [Heterocephalus glaber]
          Length = 1811

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 87/164 (53%), Gaps = 3/164 (1%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G         P G QGPIG  G  G KG  GV+G +G KG  G  G PG +G  G +G 
Sbjct: 747 EGQSGEKGALGPLGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGD 806

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGM 216
           RG  G +G  G  G  G +G+ GP GD G PG+ G  G+    GLPG PG  G  G  G 
Sbjct: 807 RGEVGQIGPRGEDGPEGPKGRAGPTGDTGPPGQAGEKGKLGVPGLPGYPGRQGQKGSTGF 866

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG +G  G  G+ G  G  G++G TGPRG+RG  G  G PG
Sbjct: 867 PGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPG 910



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 70/138 (50%), Gaps = 18/138 (13%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGL---- 201
           GPQG PG  G  G  G  G+PG +G  G++G     GP+G +GYPG  G+ G DG+    
Sbjct: 724 GPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPLGPQGPIGYPGPRGVKGADGVRGLK 783

Query: 202 --PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---------R 250
              GE G DG PG  G  G+ G  G  G+ G  G +G  G KG  GP G+         +
Sbjct: 784 GSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDTGPPGQAGEK 843

Query: 251 GKSGINGVPGTPAICAYK 268
           GK G+ G+PG P     K
Sbjct: 844 GKLGVPGLPGYPGRQGQK 861



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 94/220 (42%), Gaps = 73/220 (33%)

Query: 112 PGLQGPIG------------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           PG QGP G            ++G  GA G  G+ GE G KG  G  G PG   +PGD+G 
Sbjct: 569 PGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPG---LPGDKGH 625

Query: 160 RGPK---------------GDMGYPGPQGIPGDEGKRG---------------------- 182
           RG +               G+ G  GP+G+PG+ G RG                      
Sbjct: 626 RGERGPQGPPGSPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGPPGQPVCVDGPPG 685

Query: 183 PKGDMGY------------PG---------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           PKG+MG             PG          IG  G  G  G+PGL G+PG +G  G PG
Sbjct: 686 PKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPG 745

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           K+G  G+ G  G  G  G  G  GPRG +G  G+ G+ G+
Sbjct: 746 KEGQSGEKGALGPLGPQGPIGYPGPRGVKGADGVRGLKGS 785



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 9/119 (7%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           + ++G      +  P G  GP G KG  G  G+ G  G+ GEKG  GV       G+PG 
Sbjct: 801 MGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDTGPPGQAGEKGKLGVP------GLPGY 854

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            G++G KG  G+P   G PG  G++G +G  G PG  G  G  G  G  G  G  G+ G
Sbjct: 855 PGRQGQKGSTGFP---GFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPG 910



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 54/114 (47%), Gaps = 20/114 (17%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG--RDGLPGEPGLD---- 208
            G EG++G KG  G  G +G PG  G  GP+G  G PG  GL G    GLPG  G D    
Sbjct: 1378 GAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGPCEQGLPGAAGQDGPPG 1437

Query: 209  -----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                       G PG  G  G PG  GL    G PG  G  G++G+ G +G+ G
Sbjct: 1438 PIGPPGLPGLKGDPGFKGEKGHPGLIGL---IGPPGEQGEKGDRGLPGTQGSPG 1488



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 77/184 (41%), Gaps = 51/184 (27%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------------ 163
            G+ GAKG+ G +G  G+ G  G+ G PG +G+PG +G  G K                  
Sbjct: 1012 GKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGER 1071

Query: 164  GDMGYPGP------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  G  GP                  +G PG++G +GP G  G  G +GL G  G  G P
Sbjct: 1072 GSAGSAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSP 1131

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKD------------GIPGTNGTNGEKGMTGPRGNRGKS 253
            G DG  G  G  G  G  G  G++            G PG  G +GE    GPRG +G  
Sbjct: 1132 GEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGE---PGPRGQQGMF 1188

Query: 254  GING 257
            G  G
Sbjct: 1189 GQKG 1192



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 54/111 (48%), Gaps = 23/111 (20%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP--------QGIPGDEGK----- 159
            G  G++GE GAKGE G +G  G+ G  G  GP   PGP        QG+PG  G+     
Sbjct: 1378 GAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGPCEQGLPGAAGQDGPPG 1437

Query: 160  -------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                    G KGD G+ G +G PG  G  GP G+ G  G  GL G  G PG
Sbjct: 1438 PIGPPGLPGLKGDPGFKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPG 1488



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 57/102 (55%), Gaps = 6/102 (5%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------LDGIPGRNGM 216
           KG+ G PGPQG  G +G  GP G  G  GR G DG  G+PGEPG       DG+PG  G 
Sbjct: 563 KGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPGLPGD 622

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G+ G  G  G PG +G  GE G  GPRG  G++G  G+
Sbjct: 623 KGHRGERGPQGPPGSPGDDGMRGEDGEIGPRGLPGEAGPRGL 664



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 73/170 (42%), Gaps = 45/170 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERG------------EKGAPGVVGP----------- 147
            P GL+G  G++G  GA+G  G+KG  G            E+G+ G  GP           
Sbjct: 1031 PAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGSAGPIGLPGRPGPQG 1090

Query: 148  ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                 G +G PG++G +GP G  G  GP G+P      GP G  G PG  G  G  G PG
Sbjct: 1091 PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP------GPAGPAGSPGEDGDKGEIGEPG 1144

Query: 204  EPGLDGIPGRNGMD------------GIPGKDGLPGKDGIPGTNGTNGEK 241
            + G  G  G NG              GI G DG PG  G  G  G  G++
Sbjct: 1145 QKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDE 1194


>gi|432905697|ref|XP_004077472.1| PREDICTED: collagen alpha-1(XXI) chain-like [Oryzias latipes]
          Length = 878

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 87/153 (56%), Gaps = 15/153 (9%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KG  G +G  G  G+PG+ GP G  G  G++G RG  G+ G  G  G+PG  G++G KG 
Sbjct: 463 KGIPGARGSPGLPGSPGIQGPRGTDGYKGEQGARGVTGERGSSGLPGLPGQPGEKGEKGS 522

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNG------MDGIPGKD------GLPGKDGIPGT 234
            G PG  G  G+ G+PG  G DGIPGR+G      + GIPG D      GLPG  G+ G 
Sbjct: 523 AGSPGSPGFPGKPGVPGRDGKDGIPGRDGQKGETGVSGIPGSDGRGGRPGLPGLSGVAGL 582

Query: 235 NGTNGEKGMTGPRGNRGKSGI---NGVPGTPAI 264
           +G  G+ G  GP+G +G SG     G+PGTP +
Sbjct: 583 DGQKGDIGEPGPKGFKGSSGPPGETGLPGTPGL 615



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 90/207 (43%), Gaps = 58/207 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+QGP G  G  G +G  GV GERG  G PG+ G PG +G   ++G  G  G  G+PG 
Sbjct: 478 PGIQGPRGTDGYKGEQGARGVTGERGSSGLPGLPGQPGEKG---EKGSAGSPGSPGFPGK 534

Query: 172 QGIPGDEGK---------------------------------------RGPKGDMGYPGR 192
            G+PG +GK                                        G KGD+G PG 
Sbjct: 535 PGVPGRDGKDGIPGRDGQKGETGVSGIPGSDGRGGRPGLPGLSGVAGLDGQKGDIGEPGP 594

Query: 193 IGLDGRDGLPGEPGLDGIPGR------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G  G  G PGE GL G PG        G+ G PG+ G PG  G+PG  G+ G++G  G 
Sbjct: 595 KGFKGSSGPPGETGLPGTPGLRGPTGPKGIAGDPGRPGQPGHPGMPGLKGSKGQRGNPGE 654

Query: 247 R----------GNRGKSGINGVPGTPA 263
           R          G RG  G  G PG P 
Sbjct: 655 RGEMKGTAGDSGQRGPEGQMGRPGQPG 681



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 59/111 (53%), Gaps = 19/111 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------R 160
           G +G IG+ G  G KG  G  GE G  G PG+ GP GP+GI GD G+            +
Sbjct: 584 GQKGDIGEPGPKGFKGSSGPPGETGLPGTPGLRGPTGPKGIAGDPGRPGQPGHPGMPGLK 643

Query: 161 GPKGDMGYPGP----QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           G KG  G PG     +G  GD G+RGP+G MG PG+    G+ G PG  GL
Sbjct: 644 GSKGQRGNPGERGEMKGTAGDSGQRGPEGQMGRPGQ---PGQSGPPGPRGL 691



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 14/83 (16%)

Query: 112 PGLQGPIGQKG---------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           PGL+GP G KG         + G  G  G+KG +G++G PG  G    +G  GD G+RGP
Sbjct: 613 PGLRGPTGPKGIAGDPGRPGQPGHPGMPGLKGSKGQRGNPGERGEM--KGTAGDSGQRGP 670

Query: 163 KGDMGYPGPQGIPGDEGKRGPKG 185
           +G MG P   G PG  G  GP+G
Sbjct: 671 EGQMGRP---GQPGQSGPPGPRG 690



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 216 MDGIPGKDG---LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
           M GIPG  G   LPG  GI G  GT+G KG  G RG  G+ G +G+PG P     K E  
Sbjct: 462 MKGIPGARGSPGLPGSPGIQGPRGTDGYKGEQGARGVTGERGSSGLPGLPGQPGEKGEKG 521

Query: 273 S 273
           S
Sbjct: 522 S 522



 Score = 40.0 bits (92), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 10/52 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEM----------GVKGERGEKGAPGVVGPPGPQGI 153
           PGL+G  GQ+G  G +GEM          G +G+ G  G PG  GPPGP+G+
Sbjct: 640 PGLKGSKGQRGNPGERGEMKGTAGDSGQRGPEGQMGRPGQPGQSGPPGPRGL 691


>gi|47212298|emb|CAF90561.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 715

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/164 (44%), Positives = 89/164 (54%), Gaps = 18/164 (10%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------------------MGVKGERG 137
           L+ M+G      E   PG QG  G++G+ G +G                   MG KG+ G
Sbjct: 194 LLGMKGHKGVKGESGEPGRQGHKGEEGDQGPQGVVGAQGPPGPGGVRGFPGIMGSKGDGG 253

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            +GAPG VGP G QG PGD G+RGP G+ G PG QG  G  G RG  G  G PG  G DG
Sbjct: 254 PRGAPGDVGPRGAQGGPGDAGQRGPTGEPGIPGAQGDGGPPGIRGAPGAKGDPGLPGPDG 313

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           R+G+PG PG  G+PG++G  G  G  GLPG  G  G  G +GEK
Sbjct: 314 REGIPGLPGSKGLPGKSGAPGDAGPQGLPGLPGAYGQKGVSGEK 357



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 86/160 (53%), Gaps = 18/160 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------GIPGDEGKR 160
           G++G  G KGE G  G  G KGE G++G  GVVG  GP             G  GD G R
Sbjct: 196 GMKGHKGVKGESGEPGRQGHKGEEGDQGPQGVVGAQGPPGPGGVRGFPGIMGSKGDGGPR 255

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGLDGIPGRN 214
           G  GD+G  G QG PGD G+RGP G+ G PG        G+ G  G  G+PGL G  GR 
Sbjct: 256 GAPGDVGPRGAQGGPGDAGQRGPTGEPGIPGAQGDGGPPGIRGAPGAKGDPGLPGPDGRE 315

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G+ G+PG  GLPGK G PG  G  G  G+ G  G +G SG
Sbjct: 316 GIPGLPGSKGLPGKSGAPGDAGPQGLPGLPGAYGQKGVSG 355



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 104/282 (36%), Gaps = 105/282 (37%)

Query: 112 PGLQGPIG---QKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKR----- 160
           PGL GP G   QKG+ GA G  G KGE+G  GA G  G PG     G PG++G R     
Sbjct: 429 PGLPGPAGYRGQKGDRGAVGLDGPKGEQGPAGAEGTSGEPGDVGDHGEPGEKGSRDTIAP 488

Query: 161 ----------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
                     GP G+ G  GP+G  G  GK   +G  G PG  G+ G  GLPG PG  G 
Sbjct: 489 LTLATTCLQTGPPGETGSKGPEGSRGQHGK---EGKEGQPGPRGMQGDTGLPGLPGRQGA 545

Query: 211 PGR---------------------------------------------------NGMDGI 219
           PG+                                                   NG  G 
Sbjct: 546 PGKTPTDTHIKQVCMRVMQEQLAQLAASLSRPESGIAGLPGPPGPPGPPGPSGENGFPGH 605

Query: 220 PGKDGLPGKDGIPGT------NGTNGEKGMTGP--RGNRGKSGINGVPGTPAICAY---- 267
            G  GLPG  G PG        G  G+KG  GP  RG +G+ G  G+PG P   AY    
Sbjct: 606 VGSRGLPGLKGPPGVLGRKGPKGDQGDKGDRGPTERGPKGQPGAPGLPGQPGRAAYGKDG 665

Query: 268 ------------KRESCSLLPNSETSQLLIPPTIVGSEHIFS 297
                        R +CS LP    S      T   S H  S
Sbjct: 666 RDGERGSQRRGSARPACSRLPAPPAS------TPTASRHSAS 701



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 86/213 (40%), Gaps = 67/213 (31%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP----------- 162
           LQG  G  G  G  G  G+ GE G+ G+PG  G  GP G+PG  G RGP           
Sbjct: 123 LQG-AGAGGLDGIPGTDGLPGELGKVGSPGARGKRGPVGLPGAAGPRGPPGVYQGEELCP 181

Query: 163 ----------------------KGDMGYPGPQGIPGDEGKRGPK---------------- 184
                                 KG+ G PG QG  G+EG +GP+                
Sbjct: 182 NACSTGRTGHPGLLGMKGHKGVKGESGEPGRQGHKGEEGDQGPQGVVGAQGPPGPGGVRG 241

Query: 185 -----------GDMGYPGRIGLDGRDGLPGEPGL------DGIPGRNGMDGIPGKDGLPG 227
                      G  G PG +G  G  G PG+ G        GIPG  G  G PG  G PG
Sbjct: 242 FPGIMGSKGDGGPRGAPGDVGPRGAQGGPGDAGQRGPTGEPGIPGAQGDGGPPGIRGAPG 301

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG  G +G +G+ G  G++G  G +G PG
Sbjct: 302 AKGDPGLPGPDGREGIPGLPGSKGLPGKSGAPG 334



 Score = 46.6 bits (109), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 33/148 (22%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  G  G RG KG PG+ G PGP G       RG KGD G           G  GPKG+ 
Sbjct: 412 GPPGSPGARGSKGDPGLPGLPGPAGY------RGQKGDRGA---------VGLDGPKGEQ 456

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNG---------------MDGIPGKDGLPGKDGIP 232
           G     G +G  G PG+ G  G PG  G                 G PG+ G  G +G  
Sbjct: 457 GP---AGAEGTSGEPGDVGDHGEPGEKGSRDTIAPLTLATTCLQTGPPGETGSKGPEGSR 513

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G +G  G++G  GPRG +G +G+ G+PG
Sbjct: 514 GQHGKEGKEGQPGPRGMQGDTGLPGLPG 541



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 67/164 (40%), Gaps = 45/164 (27%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK--------------- 184
           GA G+ G PG  G+PG+ GK G  G  G  GP G+PG  G RGP                
Sbjct: 127 GAGGLDGIPGTDGLPGELGKVGSPGARGKRGPVGLPGAAGPRGPPGVYQGEELCPNACST 186

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-------------------------- 218
           G  G+PG +G+ G  G+ GE    G PGR G  G                          
Sbjct: 187 GRTGHPGLLGMKGHKGVKGE---SGEPGRQGHKGEEGDQGPQGVVGAQGPPGPGGVRGFP 243

Query: 219 -IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            I G  G  G  G PG  G  G +G  G  G RG +G  G+PG 
Sbjct: 244 GIMGSKGDGGPRGAPGDVGPRGAQGGPGDAGQRGPTGEPGIPGA 287


>gi|126308289|ref|XP_001367735.1| PREDICTED: collagen alpha-1(I) chain-like isoform 1 [Monodelphis
           domestica]
          Length = 1455

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 81/150 (54%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G+ GAKG  G  G  G  G PG  GP GPQG  G  G +G  G+ G PG +G PG +
Sbjct: 381 GADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNSGEPGAPGNKGDPGAK 440

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G+ GP G  G PG  G +G+ G  GEPG  G+PG  G  G PG  G PG DG+ G  G  
Sbjct: 441 GEPGPVGVQGPPGPAGEEGKRGSRGEPGPSGLPGPAGERGGPGSRGFPGADGVAGPKGAP 500

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           GE+G  GP G +G  G  G PG   +   K
Sbjct: 501 GERGAPGPAGPKGSPGEAGRPGEAGLPGAK 530



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/147 (47%), Positives = 81/147 (55%), Gaps = 9/147 (6%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G  GE GA G  G  G +GE G  GV GPPGP G   +EGKRG +G+   PG
Sbjct: 415 PSGAPGPKGNSGEPGAPGNKGDPGAKGEPGPVGVQGPPGPAG---EEGKRGSRGE---PG 468

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           P G+PG  G+RG  G  G+PG  G+ G  G PGE    G PG  G  G PG+ G PG+ G
Sbjct: 469 PSGLPGPAGERGGPGSRGFPGADGVAGPKGAPGE---RGAPGPAGPKGSPGEAGRPGEAG 525

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
           +PG  G  G  G  GP G  G  G  G
Sbjct: 526 LPGAKGLTGSPGSPGPDGKTGPPGPAG 552



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 83/186 (44%), Gaps = 51/186 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD- 165
           G+ GP G  GE GA G  G KG  GE G PG  G PG +G+      PG +GK GP G  
Sbjct: 492 GVAGPKGAPGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPA 551

Query: 166 --------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                               MG+PGP+G  G+ GK G +G  G PG +G  G+DG     
Sbjct: 552 GQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGAAGKDGEAGAQ 611

Query: 203 ------------GEPGLDGIPGRNGMDGI---------PGKDGLPGKDGIPGTNGTNGEK 241
                       GE G  G PG  G+ G          PG+ G+PG  G PG +G  GE+
Sbjct: 612 GPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDAGAPGPSGARGER 671

Query: 242 GMTGPR 247
           G  G R
Sbjct: 672 GFPGER 677



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 71/152 (46%), Gaps = 18/152 (11%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              +G   S  E  P GL GP G++G  G++G  G  G  G KGAPG  G PGP G  G 
Sbjct: 455 AGEEGKRGSRGEPGPSGLPGPAGERGGPGSRGFPGADGVAGPKGAPGERGAPGPAGPKGS 514

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---------------GRDGL 201
            G+ G  G+ G PG +G+ G  G  GP G  G PG  G D               G  G 
Sbjct: 515 PGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGF 574

Query: 202 PGEPGLDGIPGRNGMDGIPGKD---GLPGKDG 230
           PG  G  G PG+ G  G+PG     G  GKDG
Sbjct: 575 PGPKGAAGEPGKAGERGVPGPPGAVGAAGKDG 606



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 83/169 (49%), Gaps = 27/169 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKG-- 164
           G  GP+G +G  G  GE G +G RGE G  G+ GP      PG +G PG +G  GPKG  
Sbjct: 441 GEPGPVGVQGPPGPAGEEGKRGSRGEPGPSGLPGPAGERGGPGSRGFPGADGVAGPKGAP 500

Query: 165 -DMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI- 219
            + G PGP   +G PG+ G+    G+ G PG  GL G  G PG  G  G PG  G DG  
Sbjct: 501 GERGAPGPAGPKGSPGEAGR---PGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRP 557

Query: 220 -----------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                       G  G PG  G  G  G  GE+G+ GP G  G +G +G
Sbjct: 558 GPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGAAGKDG 606



 Score = 46.2 bits (108), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 43/85 (50%), Gaps = 9/85 (10%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           GD G  G  G PG+ G  GP+G  G PG  GL         PG+ G  G +G+DG  G  
Sbjct: 222 GDDGEAGKPGRPGERGPPGPQGARGLPGTAGL---------PGMKGHRGFSGLDGAKGDS 272

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRG 248
           G  G  G PG+ G NG  G  GPRG
Sbjct: 273 GPAGPKGEPGSPGENGAPGQMGPRG 297



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GE G+ G PG  GPPGPQ   G+PG  G  G KG  G+ G  G  GD G  GPKG+ 
Sbjct: 222 GDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDSGPAGPKGEP 281

Query: 188 GYPGRIGLDGR 198
           G PG  G  G+
Sbjct: 282 GSPGENGAPGQ 292



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 47/104 (45%), Gaps = 18/104 (17%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR- 213
            G  G  GP G  G PGPQGI G  G  G  G  G  G  GL G  G PG+ G  GI G  
Sbjct: 927  GSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGISGER 986

Query: 214  -----------------NGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                             +G +G PG +G PG+DG PG  G  GE
Sbjct: 987  GPPGPAGPPGLAGPPGESGREGSPGAEGSPGRDGSPGPKGDRGE 1030



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 80/228 (35%), Gaps = 72/228 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAP------------------------------ 142
           G  GP G KGE G+ GE G  G+ G +G P                              
Sbjct: 270 GDSGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPPGPAGARGNDGATGAAGPPGPT 329

Query: 143 ------------GVVGPPGPQGIPGDEGKRGPK------------------GDMGYPGPQ 172
                       G  G  GPQG  G EG +G +                  G  G PG +
Sbjct: 330 GPAGPPGFPGAVGAKGEAGPQGSRGSEGPQGVRGEPGPPGPAGAAGPSGNPGADGQPGAK 389

Query: 173 G---------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G          PG  G RGP G  G  G  G  G  G PG PG  G PG  G  G  G  
Sbjct: 390 GANGAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNSGEPGAPGNKGDPGAKGEPGPVGVQ 449

Query: 224 GLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G PG  G  G  G+ GE    G+ GP G RG  G  G PG   +   K
Sbjct: 450 GPPGPAGEEGKRGSRGEPGPSGLPGPAGERGGPGSRGFPGADGVAGPK 497



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 82/230 (35%), Gaps = 67/230 (29%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM- 166
           E  PPG QG  G  G  G  G  G +G  G  GA G  GP GP+G PG  G+ G  G M 
Sbjct: 235 ERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDSGPAGPKGEPGSPGENGAPGQMG 294

Query: 167 --------------------------------------------------GYPGPQGIPG 176
                                                             G  GPQG  G
Sbjct: 295 PRGLPGERGRPGPPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGSRG 354

Query: 177 DEGKRGPK---------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            EG +G +               G+ G  G+ G  G +G PG  G  G PG  G  G  G
Sbjct: 355 SEGPQGVRGEPGPPGPAGAAGPSGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQG 414

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             G PG  G  G  G  G KG  G +G  G  G+ G PG PA    KR S
Sbjct: 415 PSGAPGPKGNSGEPGAPGNKGDPGAKGEPGPVGVQGPPG-PAGEEGKRGS 463



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 79/190 (41%), Gaps = 54/190 (28%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---------------KRGPKG 164
           Q G +G  G  G  GE G+ G  GV GPPG  G  G +G               +RG +G
Sbjct: 568 QAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGAAGKDGEAGAQGPPGPAGPAGERGEQG 627

Query: 165 DMGYPGPQGI------------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDG 209
             G PG QG+            PG++G     GD G PG  G  G  G PGE    G  G
Sbjct: 628 PAGSPGFQGLPGPAGPPGEAGKPGEQGV---PGDAGAPGPSGARGERGFPGERGVQGPPG 684

Query: 210 IPGRNGMDGIPGKDG---------------------LPGKDGIPGTNGTNGEKGMTGPRG 248
             G  G +G PG DG                     +PG+ G  G  G  G++G  GP+G
Sbjct: 685 PQGPRGSNGAPGNDGAKGDAGAPGAPGGQGPPGLQGMPGERGAAGLPGAKGDRGDAGPKG 744

Query: 249 NRGKSGINGV 258
             G +G +GV
Sbjct: 745 ADGAAGKDGV 754



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G DG  G PG PG  G PG  G  G      LPG  G+PG  G  G  G+ G +G+ G +
Sbjct: 222 GDDGEAGKPGRPGERGPPGPQGARG------LPGTAGLPGMKGHRGFSGLDGAKGDSGPA 275

Query: 254 GINGVPGTPA 263
           G  G PG+P 
Sbjct: 276 GPKGEPGSPG 285



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 82/233 (35%), Gaps = 96/233 (41%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PG++G  G  G  GAKG+ G  G +GE G+PG        G PG  G R           
Sbjct: 254 PGMKGHRGFSGLDGAKGDSGPAGPKGEPGSPGE------NGAPGQMGPRGLPGERGRPGP 307

Query: 161 ----------------------------------------GPKGDMGYPGPQGI------ 174
                                                   GP+G  G  GPQG+      
Sbjct: 308 PGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGSRGSEGPQGVRGEPGP 367

Query: 175 ------------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
                       PG +G+ G KG  G PG        G PG PG  G  G  G  G PG 
Sbjct: 368 PGPAGAAGPSGNPGADGQPGAKGANGAPGIA------GAPGFPGARGPSGPQGPSGAPGP 421

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGP---------------RGNRGKSGINGVPG 260
            G  G+ G PG  G  G KG  GP               RG+RG+ G +G+PG
Sbjct: 422 KGNSGEPGAPGNKGDPGAKGEPGPVGVQGPPGPAGEEGKRGSRGEPGPSGLPG 474



 Score = 40.4 bits (93), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 24/99 (24%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---- 166
            P G  G  G +G  G +G +G+ G+RGE+G PG+   PGP G PG +G  G  G+     
Sbjct: 934  PAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL---PGPSGEPGKQGPSGISGERGPPG 990

Query: 167  -----------------GYPGPQGIPGDEGKRGPKGDMG 188
                             G PG +G PG +G  GPKGD G
Sbjct: 991  PAGPPGLAGPPGESGREGSPGAEGSPGRDGSPGPKGDRG 1029



 Score = 39.7 bits (91), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 73/183 (39%), Gaps = 63/183 (34%)

Query: 134  GERGEKGAPGVVGPPGPQGIPGDEGK------------------------RGPKGDM--- 166
            G  G KGA G  GPPG  G PG  G+                        +GP+G+    
Sbjct: 849  GAPGPKGARGNAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPI 908

Query: 167  ------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEP 205
                              G PG  G  G  G  GP+G  G  G +GL G+    G PG P
Sbjct: 909  GRPGEVGPPGPPGPSGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLP 968

Query: 206  GLDGIPGRNGMDGIPGKDGLP---------------GKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G PG+ G  GI G+ G P               G++G PG  G+ G  G  GP+G+R
Sbjct: 969  GPSGEPGKQGPSGISGERGPPGPAGPPGLAGPPGESGREGSPGAEGSPGRDGSPGPKGDR 1028

Query: 251  GKS 253
            G++
Sbjct: 1029 GET 1031


>gi|307196424|gb|EFN78013.1| Collagen alpha-1(XI) chain [Harpegnathos saltator]
          Length = 1817

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 101/193 (52%), Gaps = 25/193 (12%)

Query: 112  PGLQGPIGQKG------------------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            PGL GP G+ G                  E G KG++G  GE+G KG+ G +GPPGPQGI
Sbjct: 1089 PGLAGPTGRDGLPGQRGLPGPPGPVGVPGEDGDKGDIGPPGEKGFKGSQGEMGPPGPQGI 1148

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---GRDGLPGEPGLDGI 210
               +G RG  G MG  G +G PG+ G++GPKG+ G  G IGL    G  GLPG PG  G 
Sbjct: 1149 ---QGPRGEPGLMGPFGEKGPPGEMGRQGPKGEEGPAGAIGLAGPIGSQGLPGPPGTKGE 1205

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI-CAYKR 269
             G +G  G  G  G PG+ G  G  G  G +G +GP G +G  G NG  G P +  A  +
Sbjct: 1206 VGDSGTTGPMGSPGAPGERGPKGPKGFKGTQGSSGPEGRQGVKGDNGSSGPPGVPGAVGK 1265

Query: 270  ESCSLLPNSETSQ 282
            ++    P ++  +
Sbjct: 1266 QAERGFPGAKGEE 1278



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 85/173 (49%), Gaps = 27/173 (15%)

Query: 100  QGFCNSTKEYCPPG------------LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
            +GF  S  E  PPG            L GP G+KG  G  G  G KGE G  GA G+ GP
Sbjct: 1131 KGFKGSQGEMGPPGPQGIQGPRGEPGLMGPFGEKGPPGEMGRQGPKGEEGPAGAIGLAGP 1190

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             G QG+PG  G +G  GD G  GP G PG  G+RGPKG  G+ G  G  G +      G 
Sbjct: 1191 IGSQGLPGPPGTKGEVGDSGTTGPMGSPGAPGERGPKGPKGFKGTQGSSGPE------GR 1244

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G NG  G P         G+PG  G   E+G  G +G  GK+G +G PG
Sbjct: 1245 QGVKGDNGSSGPP---------GVPGAVGKQAERGFPGAKGEEGKAGSSGHPG 1288



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 72/133 (54%), Gaps = 18/133 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGYP 169
           G++G  GQ+G  G +GE G KG  GEKG  GV G PG   PQGIPG EG  GPKG   + 
Sbjct: 757 GIKGDEGQRGPPGERGEKGEKGLEGEKGDVGVKGEPGTTGPQGIPGLEGLEGPKG---FE 813

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G      + GP G  G  G+IG+ G  G PG PG        G  G PGK G  G  
Sbjct: 814 GPRG------ETGPAGAAGEKGKIGVSGFAGYPGNPG------EKGDKGQPGKQGPSGDK 861

Query: 230 GIPGTNGTNGEKG 242
           G  G NG  GE+G
Sbjct: 862 GERGNNGLQGERG 874



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 93/222 (41%), Gaps = 63/222 (28%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------------ 161
           L GP G KGE G  G  G+ G++GE+G PG+ G PG   +PG EG +G            
Sbjct: 584 LGGPPGVKGEQGLIGLPGLPGDKGERGLPGISGEPG---LPGHEGIQGEDGPPGLPGLPG 640

Query: 162 ---------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------------------G 194
                    P+G  G PG  GIPG+EG  G KG+ G PG                    G
Sbjct: 641 ELGPRGFIGPRGFPGVPGNPGIPGNEGPPGVKGNAGPPGPAGALGQPGPIGPVGPPGSQG 700

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---------------- 238
           L G  GL G  G  GIPG  G DG P   GLPG  G+PG  G                  
Sbjct: 701 LLGPTGLAGPQGKPGIPGLPGADGSP---GLPGNSGVPGVKGEQGPPGPQGPIGFPGVRG 757

Query: 239 --GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
             G++G  GP G RG+ G  G+ G       K E  +  P  
Sbjct: 758 IKGDEGQRGPPGERGEKGEKGLEGEKGDVGVKGEPGTTGPQG 799



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 85/186 (45%), Gaps = 36/186 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------KGDM 166
            GL GP G KGE+G   + G  G  G  GAPG  GP GP+G  G +G  GP      KGD 
Sbjct: 1195 GLPGPPGTKGEVG---DSGTTGPMGSPGAPGERGPKGPKGFKGTQGSSGPEGRQGVKGDN 1251

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG----------------- 209
            G  GP G+PG  GK   + + G+PG  G +G+ G  G PGL G                 
Sbjct: 1252 GSSGPPGVPGAVGK---QAERGFPGAKGEEGKAGSSGHPGLRGLIGPEGPKGNVGLPGFP 1308

Query: 210  -------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                   + G  G  G  G+DG  G  G PG  G  G++G+ GP G  G  G  G+ G  
Sbjct: 1309 GPPGEPGLTGAKGEAGKDGEDGHIGDAGSPGEAGPLGKEGLPGPPGKSGPEGPAGLQGNT 1368

Query: 263  AICAYK 268
             +   K
Sbjct: 1369 GLPGEK 1374



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 91/198 (45%), Gaps = 42/198 (21%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
           ++G      +  PPG +G  G+KG  G KG++GVKGE      PG     GPQGIPG EG
Sbjct: 755 VRGIKGDEGQRGPPGERGEKGEKGLEGEKGDVGVKGE------PGTT---GPQGIPGLEG 805

Query: 159 KRGPK---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             GPK   G  G  GP G  G++GK G  G  GYPG  G  G  G PG+ G  G  G  G
Sbjct: 806 LEGPKGFEGPRGETGPAGAAGEKGKIGVSGFAGYPGNPGEKGDKGQPGKQGPSGDKGERG 865

Query: 216 MDGIPGKDG------------LPGKDGIPGTNG------------------TNGEKGMTG 245
            +G+ G+ G              G +G+PG  G                    G +G  G
Sbjct: 866 NNGLQGERGEIGPRGFRGARGRRGSEGLPGPKGDTGQPGPPGLPGEVGPPGVEGPRGFVG 925

Query: 246 PRGNRGKSGINGVPGTPA 263
           P G+ G  G +G+PG P 
Sbjct: 926 PPGSLGLDGKDGIPGPPG 943



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 84/167 (50%), Gaps = 12/167 (7%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---------QGIP 175
           G  G  G+ G +G+ G PG+ G  G  G+PG+ G  G KG+ G PGP         +GI 
Sbjct: 700 GLLGPTGLAGPQGKPGIPGLPGADGSPGLPGNSGVPGVKGEQGPPGPQGPIGFPGVRGIK 759

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           GDEG+RGP G+ G  G  GL+G     G+ G+ G PG  G  GIPG +GL G  G  G  
Sbjct: 760 GDEGQRGPPGERGEKGEKGLEGEK---GDVGVKGEPGTTGPQGIPGLEGLEGPKGFEGPR 816

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
           G  G  G  G +G  G SG  G PG P     K +     P+ +  +
Sbjct: 817 GETGPAGAAGEKGKIGVSGFAGYPGNPGEKGDKGQPGKQGPSGDKGE 863



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 94/218 (43%), Gaps = 48/218 (22%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------------MGVKGERGEKGAPG 143
           L+ + G      E   PG+ G  G  G  G +GE            +G +G  G +G PG
Sbjct: 596 LIGLPGLPGDKGERGLPGISGEPGLPGHEGIQGEDGPPGLPGLPGELGPRGFIGPRGFPG 655

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGP------------------QGIPGDEGKRGPKG 185
           V   PG  GIPG+EG  G KG+ G PGP                  QG+ G  G  GP+G
Sbjct: 656 V---PGNPGIPGNEGPPGVKGNAGPPGPAGALGQPGPIGPVGPPGSQGLLGPTGLAGPQG 712

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRN---------------GMDGIPGKDGLPGKDG 230
             G PG  G DG  GLPG  G+ G+ G                 G+ G  G+ G PG+ G
Sbjct: 713 KPGIPGLPGADGSPGLPGNSGVPGVKGEQGPPGPQGPIGFPGVRGIKGDEGQRGPPGERG 772

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G  GEKG  G +G  G +G  G+PG   +   K
Sbjct: 773 EKGEKGLEGEKGDVGVKGEPGTTGPQGIPGLEGLEGPK 810



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 9/126 (7%)

Query: 99   MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            ++G   +  E  PPG+ G +G  G++G  G  G KG++G +G          +G  GD G
Sbjct: 1403 VRGLPGAAGENGPPGIAGAVGVSGKVGPVGPKGPKGDKGRRGV---------KGHRGDLG 1453

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
              G KGD G  G +G+ G  G  GPKG  G  G +G  G DG PG PG++G PG  G  G
Sbjct: 1454 HVGIKGDQGEQGEKGLRGQIGHEGPKGSPGPAGPVGSKGNDGPPGLPGMEGTPGPKGNTG 1513

Query: 219  IPGKDG 224
              G  G
Sbjct: 1514 NDGTKG 1519



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 91/218 (41%), Gaps = 66/218 (30%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGP 150
            V ++G   +T     PGL+G  G KG  G +GE G  G  GEKG  GV G       PG 
Sbjct: 786  VGVKGEPGTTGPQGIPGLEGLEGPKGFEGPRGETGPAGAAGEKGKIGVSGFAGYPGNPGE 845

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGD------------------EGKRGPKGD------ 186
            +G  G  GK+GP GD G  G  G+ G+                  EG  GPKGD      
Sbjct: 846  KGDKGQPGKQGPSGDKGERGNNGLQGERGEIGPRGFRGARGRRGSEGLPGPKGDTGQPGP 905

Query: 187  ------------------MGYPGRIGLDGRDGLPGEPGLD------------------GI 210
                              +G PG +GLDG+DG+PG PG                    G+
Sbjct: 906  PGLPGEVGPPGVEGPRGFVGPPGSLGLDGKDGIPGPPGERGPIGESGPPGSPGVPGVIGL 965

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G  G  G  G+ G PG  G+PG  G  GE+G  GP G
Sbjct: 966  QGPIGETGQSGEPGAPGSPGLPGEIGPPGEQGKEGPPG 1003



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 87/217 (40%), Gaps = 54/217 (24%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQG-- 152
              QG         PPG+ G +G++ E G   AKGE G  G  G  G  G++GP GP+G  
Sbjct: 1243 GRQGVKGDNGSSGPPGVPGAVGKQAERGFPGAKGEEGKAGSSGHPGLRGLIGPEGPKGNV 1302

Query: 153  -------------------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
                                 G +G+ G  GD G PG  G  G EG  GP G  G  G  
Sbjct: 1303 GLPGFPGPPGEPGLTGAKGEAGKDGEDGHIGDAGSPGEAGPLGKEGLPGPPGKSGPEGPA 1362

Query: 194  GLDGRDGLPGEP------------------------------GLDGIPGRNGMDGIPGKD 223
            GL G  GLPGE                               GL G  G NG  GI G  
Sbjct: 1363 GLQGNTGLPGEKGDVGLPGPPGPQGHVGPQGLPGPPGLPGVRGLPGAAGENGPPGIAGAV 1422

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ GK G  G  G  G+KG  G +G+RG  G  G+ G
Sbjct: 1423 GVSGKVGPVGPKGPKGDKGRRGVKGHRGDLGHVGIKG 1459



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 3/116 (2%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG---DMGYPGPQGIPGD 177
            +G  GA GE G  G  G  G  G VGP GP+G  GD+G+RG KG   D+G+ G +G  G+
Sbjct: 1404 RGLPGAAGENGPPGIAGAVGVSGKVGPVGPKGPKGDKGRRGVKGHRGDLGHVGIKGDQGE 1463

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            +G++G +G +G+ G  G  G  G  G  G DG PG  GM+G PG  G  G DG  G
Sbjct: 1464 QGEKGLRGQIGHEGPKGSPGPAGPVGSKGNDGPPGLPGMEGTPGPKGNTGNDGTKG 1519



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 105/268 (39%), Gaps = 73/268 (27%)

Query: 51  SVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYC 110
             P  P   FV P L  +  E+  + Q          L       ++ M+G         
Sbjct: 480 GAPGPPGNVFVMPQLSPQGNEKGPDSQAEA-------LRQMLSQHMLTMRGTEGPMGLTG 532

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------------VVGPPGPQG 152
            PGL+GP G +G+ G  G++G  G RGE+G PG                  + GPPG   
Sbjct: 533 TPGLEGPSGPQGQKGEPGDIGEPGPRGERGIPGNSGREGRRGRPGRDGERGLGGPPGV-- 590

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRD---------- 199
                     KG+ G  G  G+PGD+G+RG     G+ G PG  G+ G D          
Sbjct: 591 ----------KGEQGLIGLPGLPGDKGERGLPGISGEPGLPGHEGIQGEDGPPGLPGLPG 640

Query: 200 -----------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------------PGTNG 236
                      G PG PG  GIPG  G  G+ G  G PG  G             PG+ G
Sbjct: 641 ELGPRGFIGPRGFPGVPGNPGIPGNEGPPGVKGNAGPPGPAGALGQPGPIGPVGPPGSQG 700

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G+ GP+G  G  G+ G  G+P +
Sbjct: 701 LLGPTGLAGPQGKPGIPGLPGADGSPGL 728



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 119/299 (39%), Gaps = 74/299 (24%)

Query: 35   RFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRI 94
            +  + ++ +KGD+     P T   + +P    E +   +  +       P        +I
Sbjct: 774  KGEKGLEGEKGDVGVKGEPGTTGPQGIP--GLEGLEGPKGFEGPRGETGPAGAAGEKGKI 831

Query: 95   PLVAMQGFCNSTKEYC---PPGLQGPIGQKGEIGAKGEMGVKGERGE---------KGAP 142
             +    G+  +  E      PG QGP G KGE   +G  G++GERGE         +G  
Sbjct: 832  GVSGFAGYPGNPGEKGDKGQPGKQGPSGDKGE---RGNNGLQGERGEIGPRGFRGARGRR 888

Query: 143  GVVGPPGPQG------------------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            G  G PGP+G                  + G  G  GP G +G  G  GIPG  G+RGP 
Sbjct: 889  GSEGLPGPKGDTGQPGPPGLPGEVGPPGVEGPRGFVGPPGSLGLDGKDGIPGPPGERGPI 948

Query: 185  GD------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---- 228
            G+            +G  G IG  G+ G PG PG  G+PG  G  G  GK+G PG     
Sbjct: 949  GESGPPGSPGVPGVIGLQGPIGETGQSGEPGAPGSPGLPGEIGPPGEQGKEGPPGPIGLT 1008

Query: 229  --------------------DGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPAI 264
                                 G+PG  G  GE    G  GP G++G  G +G  G+P +
Sbjct: 1009 GPAGPPGPGGLPGFPGERGLSGLPGLAGLKGEIGPIGAQGPSGDKGAQGESGKDGSPGL 1067



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 91/219 (41%), Gaps = 72/219 (32%)

Query: 111  PPGLQGPIGQKGE---------IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            PPG +GPIG+ G          IG +G +G  G+ GE GAPG  G PG  G PG++GK G
Sbjct: 941  PPGERGPIGESGPPGSPGVPGVIGLQGPIGETGQSGEPGAPGSPGLPGEIGPPGEQGKEG 1000

Query: 162  PKGDM------------------------GYPGPQGIPGD---EGKRGPKGDMGYPGRIG 194
            P G +                        G PG  G+ G+    G +GP GD G  G  G
Sbjct: 1001 PPGPIGLTGPAGPPGPGGLPGFPGERGLSGLPGLAGLKGEIGPIGAQGPSGDKGAQGESG 1060

Query: 195  LDGRDGLP------------------GEPGLDGIPGRNGM------------------DG 218
             DG  GL                   GEPGL G  GR+G+                  DG
Sbjct: 1061 KDGSPGLEGRQGPEGPPGPVGLKGDRGEPGLAGPTGRDGLPGQRGLPGPPGPVGVPGEDG 1120

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G  G PG+ G  G+ G  G  G  G +G RG+ G+ G
Sbjct: 1121 DKGDIGPPGEKGFKGSQGEMGPPGPQGIQGPRGEPGLMG 1159



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 91/232 (39%), Gaps = 72/232 (31%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDE 157
            G   +  E  P G +G  G +G  G +G  GVKG+ G  G PGV G  G Q   G PG +
Sbjct: 1216 GSPGAPGERGPKGPKGFKGTQGSSGPEGRQGVKGDNGSSGPPGVPGAVGKQAERGFPGAK 1275

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPK------------------------------GDM 187
            G+ G  G  G+PG +G+ G EG +G                                GD 
Sbjct: 1276 GEEGKAGSSGHPGLRGLIGPEGPKGNVGLPGFPGPPGEPGLTGAKGEAGKDGEDGHIGDA 1335

Query: 188  GYPGRIGLDGRDGLPGEPGLD------------GIPGRNG-------------------- 215
            G PG  G  G++GLPG PG              G+PG  G                    
Sbjct: 1336 GSPGEAGPLGKEGLPGPPGKSGPEGPAGLQGNTGLPGEKGDVGLPGPPGPQGHVGPQGLP 1395

Query: 216  -------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   + G+PG  G  G  GI G  G +G+ G  GP+G +G  G  GV G
Sbjct: 1396 GPPGLPGVRGLPGAAGENGPPGIAGAVGVSGKVGPVGPKGPKGDKGRRGVKG 1447



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 87/227 (38%), Gaps = 57/227 (25%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------------- 134
            + +QG    T +   PG  G  G  GEIG  GE G +G                      
Sbjct: 963  IGLQGPIGETGQSGEPGAPGSPGLPGEIGPPGEQGKEGPPGPIGLTGPAGPPGPGGLPGF 1022

Query: 135  --ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP--------- 183
              ERG  G PG+ G  G  G  G +G  G KG  G  G  G PG EG++GP         
Sbjct: 1023 PGERGLSGLPGLAGLKGEIGPIGAQGPSGDKGAQGESGKDGSPGLEGRQGPEGPPGPVGL 1082

Query: 184  KGDMGYPGRIGLDGRDGLP------------------------GEPGLDGIPGRNGMDGI 219
            KGD G PG  G  GRDGLP                        G PG  G  G  G  G 
Sbjct: 1083 KGDRGEPGLAGPTGRDGLPGQRGLPGPPGPVGVPGEDGDKGDIGPPGEKGFKGSQGEMGP 1142

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            PG  G+ G  G PG  G  GEKG  G  G +G  G  G  G   +  
Sbjct: 1143 PGPQGIQGPRGEPGLMGPFGEKGPPGEMGRQGPKGEEGPAGAIGLAG 1189



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 89/212 (41%), Gaps = 60/212 (28%)

Query: 113  GLQGPIGQKGEI---------------GAKGEMGVKGERG---EKGAPGVVGPPGPQGIP 154
            GL GP G KG +               GAKGE G  GE G   + G+PG  GP G +G+P
Sbjct: 1291 GLIGPEGPKGNVGLPGFPGPPGEPGLTGAKGEAGKDGEDGHIGDAGSPGEAGPLGKEGLP 1350

Query: 155  GDEGKRGP------KGDMGYPGPQG------------------------------IPGDE 178
            G  GK GP      +G+ G PG +G                              +PG  
Sbjct: 1351 GPPGKSGPEGPAGLQGNTGLPGEKGDVGLPGPPGPQGHVGPQGLPGPPGLPGVRGLPGAA 1410

Query: 179  GKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIP 232
            G+ GP    G +G  G++G  G  G  G+ G  G+ G     G  GI G  G  G+ G+ 
Sbjct: 1411 GENGPPGIAGAVGVSGKVGPVGPKGPKGDKGRRGVKGHRGDLGHVGIKGDQGEQGEKGLR 1470

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G KG  GP G  G  G +G PG P +
Sbjct: 1471 GQIGHEGPKGSPGPAGPVGSKGNDGPPGLPGM 1502



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 82/192 (42%), Gaps = 36/192 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PGL G  G+ G IGA+G  G KG +GE G           G PG EG++GP         
Sbjct: 1032 PGLAGLKGEIGPIGAQGPSGDKGAQGESGK---------DGSPGLEGRQGPEGPPGPVGL 1082

Query: 163  KGDMGYPGPQGIPGDEG------------------KRGPKGDMGYPGRIGLDGRDGLPGE 204
            KGD G PG  G  G +G                  + G KGD+G PG  G  G  G  G 
Sbjct: 1083 KGDRGEPGLAGPTGRDGLPGQRGLPGPPGPVGVPGEDGDKGDIGPPGEKGFKGSQGEMGP 1142

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PG  GI G  G  G+ G  G  G  G  G  G  GE+G  G  G  G  G  G+PG P  
Sbjct: 1143 PGPQGIQGPRGEPGLMGPFGEKGPPGEMGRQGPKGEEGPAGAIGLAGPIGSQGLPGPPGT 1202

Query: 265  CAYKRESCSLLP 276
                 +S +  P
Sbjct: 1203 KGEVGDSGTTGP 1214



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 79/202 (39%), Gaps = 68/202 (33%)

Query: 123 EIGAKGEMGVKGERG----------------EKGAP------------------GVVGPP 148
           E G  G  G++G  G                EKG                    G  GP 
Sbjct: 469 EPGRDGLAGLQGAPGPPGNVFVMPQLSPQGNEKGPDSQAEALRQMLSQHMLTMRGTEGPM 528

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD-----------------MGYPG 191
           G  G PG EG  GP+G  G PG  G PG  G+RG  G+                 +G P 
Sbjct: 529 GLTGTPGLEGPSGPQGQKGEPGDIGEPGPRGERGIPGNSGREGRRGRPGRDGERGLGGP- 587

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---------GTNGEKG 242
             G+ G  GL G PGL G  G  G+ GI G+ GLPG +GI G +         G  G +G
Sbjct: 588 -PGVKGEQGLIGLPGLPGDKGERGLPGISGEPGLPGHEGIQGEDGPPGLPGLPGELGPRG 646

Query: 243 MTGPRGNRGKSGINGVPGTPAI 264
             GPR      G  GVPG P I
Sbjct: 647 FIGPR------GFPGVPGNPGI 662


>gi|395532736|ref|XP_003768424.1| PREDICTED: collagen alpha-1(I) chain isoform 2 [Sarcophilus
           harrisii]
          Length = 1447

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 82/150 (54%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G+ GAKG  G  G  G  G PG  GP GPQG  G  G +G  G+ G PG +G PG +
Sbjct: 373 GADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNSGEPGTPGNKGDPGAK 432

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G+ GP G  G PG  G +G+ G  GEPG  G+PG  G  G PG  G PG DG+ G  G  
Sbjct: 433 GEPGPVGVQGPPGPAGEEGKRGSRGEPGPAGLPGPAGERGGPGSRGFPGADGVAGPKGAP 492

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           GE+G  GP G +G  G +G PG   +   K
Sbjct: 493 GERGAPGPAGPKGSPGESGRPGEAGLPGAK 522



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/147 (46%), Positives = 79/147 (53%), Gaps = 3/147 (2%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QGP G  G  G  GE G  G +G+ GA G  GP G QG PG  G+ G +G  G PG
Sbjct: 401 PSGPQGPSGAPGPKGNSGEPGTPGNKGDPGAKGEPGPVGVQGPPGPAGEEGKRGSRGEPG 460

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           P G+PG  G+RG  G  G+PG  G+ G  G PGE    G PG  G  G PG+ G PG+ G
Sbjct: 461 PAGLPGPAGERGGPGSRGFPGADGVAGPKGAPGE---RGAPGPAGPKGSPGESGRPGEAG 517

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
           +PG  G  G  G  GP G  G  G  G
Sbjct: 518 LPGAKGLTGSPGSPGPDGKTGPPGPAG 544



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 81/177 (45%), Gaps = 33/177 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
           PG +G  G KGE G  G  G  G  GE+G  G  G PGP G+PG  G+RG  G  G+P  
Sbjct: 423 PGNKGDPGAKGEPGPVGVQGPPGPAGEEGKRGSRGEPGPAGLPGPAGERGGPGSRGFPGA 482

Query: 170 ----GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
               GP+G PG+ G  GP G  G PG  G  G  GLPG  GL G PG  G DG  G  G 
Sbjct: 483 DGVAGPKGAPGERGAPGPAGPKGSPGESGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGP 542

Query: 226 PGKD------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G+D                  G PG  G  GE          GK+G  GVPG P  
Sbjct: 543 AGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEP---------GKAGERGVPGPPGA 590



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 71/152 (46%), Gaps = 18/152 (11%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              +G   S  E  P GL GP G++G  G++G  G  G  G KGAPG  G PGP G  G 
Sbjct: 447 AGEEGKRGSRGEPGPAGLPGPAGERGGPGSRGFPGADGVAGPKGAPGERGAPGPAGPKGS 506

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---------------GRDGL 201
            G+ G  G+ G PG +G+ G  G  GP G  G PG  G D               G  G 
Sbjct: 507 PGESGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGF 566

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGL---PGKDG 230
           PG  G  G PG+ G  G+PG  G     GKDG
Sbjct: 567 PGPKGAAGEPGKAGERGVPGPPGAVGPAGKDG 598



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 83/169 (49%), Gaps = 27/169 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKG-- 164
           G  GP+G +G  G  GE G +G RGE G  G+ GP      PG +G PG +G  GPKG  
Sbjct: 433 GEPGPVGVQGPPGPAGEEGKRGSRGEPGPAGLPGPAGERGGPGSRGFPGADGVAGPKGAP 492

Query: 165 -DMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI- 219
            + G PGP   +G PG+ G+    G+ G PG  GL G  G PG  G  G PG  G DG  
Sbjct: 493 GERGAPGPAGPKGSPGESGR---PGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRP 549

Query: 220 -----------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                       G  G PG  G  G  G  GE+G+ GP G  G +G +G
Sbjct: 550 GPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDG 598



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 79/186 (42%), Gaps = 51/186 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------ 166
           G+ GP G  GE GA G  G KG  GE G PG  G PG +G+ G  G  GP G        
Sbjct: 484 GVAGPKGAPGERGAPGPAGPKGSPGESGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPA 543

Query: 167 ---------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                                G+PGP+G  G+ GK G +G  G PG +G  G+DG     
Sbjct: 544 GQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQ 603

Query: 203 ------------GEPGLDGIPGRNGMDGI---------PGKDGLPGKDGIPGTNGTNGEK 241
                       GE G  G PG  G+ G          PG+ G+PG  G PG +G  GE+
Sbjct: 604 GAPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDAGAPGPSGARGER 663

Query: 242 GMTGPR 247
           G  G R
Sbjct: 664 GFPGER 669



 Score = 46.2 bits (108), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 43/85 (50%), Gaps = 9/85 (10%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           GD G  G  G PG+ G  GP+G  G PG  GL         PG+ G  G +G+DG  G  
Sbjct: 214 GDDGEAGKPGRPGERGPPGPQGARGLPGTAGL---------PGMKGHRGFSGLDGAKGDS 264

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRG 248
           G  G  G PG+ G NG  G  GPRG
Sbjct: 265 GPAGPKGEPGSPGENGAPGQMGPRG 289



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 47/104 (45%), Gaps = 18/104 (17%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR- 213
            G  G  GP G  G PGPQGI G  G  G  G  G  G  GL G  G PG+ G  G+ G  
Sbjct: 919  GSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGVSGER 978

Query: 214  -----------------NGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                             +G +G PG +G PG+DG PG  G  GE
Sbjct: 979  GPPGPAGPPGLAGPPGESGREGSPGAEGSPGRDGAPGPKGDRGE 1022



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GE G+ G PG  GPPGPQ   G+PG  G  G KG  G+ G  G  GD G  GPKG+ 
Sbjct: 214 GDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDSGPAGPKGEP 273

Query: 188 GYPGRIGLDGR 198
           G PG  G  G+
Sbjct: 274 GSPGENGAPGQ 284



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 83/230 (36%), Gaps = 67/230 (29%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM- 166
           E  PPG QG  G  G  G  G  G +G  G  GA G  GP GP+G PG  G+ G  G M 
Sbjct: 227 ERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDSGPAGPKGEPGSPGENGAPGQMG 286

Query: 167 --------------------------------------------------GYPGPQGIPG 176
                                                             G  GPQG  G
Sbjct: 287 PRGLPGERGRPGPPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGSRG 346

Query: 177 DEGKRGPK---------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            EG +G +               G+ G  G+ G  G +G PG  G  G PG  G  G  G
Sbjct: 347 SEGPQGVRGEPGPPGPAGSPGPSGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQG 406

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             G PG  G  G  GT G KG  G +G  G  G+ G PG PA    KR S
Sbjct: 407 PSGAPGPKGNSGEPGTPGNKGDPGAKGEPGPVGVQGPPG-PAGEEGKRGS 455



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G DG  G PG PG  G PG  G  G      LPG  G+PG  G  G  G+ G +G+ G +
Sbjct: 214 GDDGEAGKPGRPGERGPPGPQGARG------LPGTAGLPGMKGHRGFSGLDGAKGDSGPA 267

Query: 254 GINGVPGTPA 263
           G  G PG+P 
Sbjct: 268 GPKGEPGSPG 277



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 24/99 (24%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---- 166
            P G  G  G +G  G +G +G+ G+RGE+G PG+   PGP G PG +G  G  G+     
Sbjct: 926  PAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL---PGPSGEPGKQGPSGVSGERGPPG 982

Query: 167  -----------------GYPGPQGIPGDEGKRGPKGDMG 188
                             G PG +G PG +G  GPKGD G
Sbjct: 983  PAGPPGLAGPPGESGREGSPGAEGSPGRDGAPGPKGDRG 1021



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 84/215 (39%), Gaps = 81/215 (37%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------DEGKRGPKGDMGY- 168
           G KG  G  G+ GE+G PG  G  GP G  G               + G++GP G  G+ 
Sbjct: 568 GPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQ 627

Query: 169 --------------PGPQGIPGDEGKRGP---KGDMGYPGRI---------------GLD 196
                         PG QG+PGD G  GP   +G+ G+PG                 G  
Sbjct: 628 GLPGPAGPPGEAGKPGEQGVPGDAGAPGPSGARGERGFPGERGVQGPPGPQGPRGANGAP 687

Query: 197 GRDG---------------------LPGEPGLDGIPGRNG--MDGIP-GKDGLPGKDGIP 232
           G DG                     +PGE G  G+PG  G   D  P G DG PGKDG+ 
Sbjct: 688 GNDGAKGDAGAPGAPGGQGPPGLQGMPGERGAAGLPGAKGDRGDAGPKGADGAPGKDGVR 747

Query: 233 G---------TNGTNGEKGMTGPRGNRGKSGINGV 258
           G           G +G+KG +GP G  G +G  G 
Sbjct: 748 GLTGPIGPPGPAGPSGDKGESGPSGPAGPTGARGA 782



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 81/233 (34%), Gaps = 96/233 (41%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PG++G  G  G  GAKG+ G  G +GE G+PG        G PG  G R           
Sbjct: 246 PGMKGHRGFSGLDGAKGDSGPAGPKGEPGSPGE------NGAPGQMGPRGLPGERGRPGP 299

Query: 161 ----------------------------------------GPKGDMGYPGPQGI------ 174
                                                   GP+G  G  GPQG+      
Sbjct: 300 PGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGSRGSEGPQGVRGEPGP 359

Query: 175 ------------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
                       PG +G+ G KG  G PG        G PG PG  G  G  G  G PG 
Sbjct: 360 PGPAGSPGPSGNPGADGQPGAKGANGAPGIA------GAPGFPGARGPSGPQGPSGAPGP 413

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGP---------------RGNRGKSGINGVPG 260
            G  G+ G PG  G  G KG  GP               RG+RG+ G  G+PG
Sbjct: 414 KGNSGEPGTPGNKGDPGAKGEPGPVGVQGPPGPAGEEGKRGSRGEPGPAGLPG 466



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 73/183 (39%), Gaps = 63/183 (34%)

Query: 134  GERGEKGAPGVVGPPGPQGIPGDEGK------------------------RGPKGDM--- 166
            G  G KGA G  GPPG  G PG  G+                        +GP+G+    
Sbjct: 841  GAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPI 900

Query: 167  ------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEP 205
                              G PG  G  G  G  GP+G  G  G +GL G+    G PG P
Sbjct: 901  GRPGEVGPPGPPGPSGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLP 960

Query: 206  GLDGIPGRNGMDGIPGKDGLP---------------GKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G PG+ G  G+ G+ G P               G++G PG  G+ G  G  GP+G+R
Sbjct: 961  GPSGEPGKQGPSGVSGERGPPGPAGPPGLAGPPGESGREGSPGAEGSPGRDGAPGPKGDR 1020

Query: 251  GKS 253
            G++
Sbjct: 1021 GET 1023


>gi|110761872|ref|XP_391942.3| PREDICTED: collagen alpha-1(XI) chain-like isoform 1 [Apis
           mellifera]
          Length = 1755

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 97/175 (55%), Gaps = 9/175 (5%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG +G  G +G +G+ G+ G  G  G+PG  G PG  G  G++G +G +G +G+PG
Sbjct: 638 PPGPQGLLGPTGLVGPQGKPGIPGLSGADGSPGHPGNPGIPGTKGEQGLQGSQGPIGFPG 697

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            +GI GDEGKRG  G+ G  G  G++G     G+ G  G PG +G  GIPG +GL G  G
Sbjct: 698 VRGIKGDEGKRGSPGERGEKGEKGVEGEK---GDVGAKGEPGLSGPQGIPGLEGLEGPKG 754

Query: 231 IPGTNGTNGEKGMTGPRGNRGKS---GINGVPGTPAICAYKRESCSLLPNSETSQ 282
                G  GE G+ GP G +GK+   G  G PG P     K +S    PN +  +
Sbjct: 755 F---EGPRGESGLIGPPGEKGKTGPPGFVGYPGNPGEKGDKGQSGREGPNGDKGE 806



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 94/171 (54%), Gaps = 6/171 (3%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+   G      +   PGL G  G  G  G  G  G KGE+G +G+ G +G PG +GI G
Sbjct: 644 LLGPTGLVGPQGKPGIPGLSGADGSPGHPGNPGIPGTKGEQGLQGSQGPIGFPGVRGIKG 703

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           DEGKRG  G+ G  G +G+ G++G  G KG+ G  G  G+ G +GL G  G +G  G +G
Sbjct: 704 DEGKRGSPGERGEKGEKGVEGEKGDVGAKGEPGLSGPQGIPGLEGLEGPKGFEGPRGESG 763

Query: 216 MDGIP---GKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPG 260
           + G P   GK G PG  G PG  G  G+KG +   GP G++G+ G NG  G
Sbjct: 764 LIGPPGEKGKTGPPGFVGYPGNPGEKGDKGQSGREGPNGDKGERGTNGAQG 814



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 102/227 (44%), Gaps = 52/227 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG---------------EKGAPGVVGP------PGP 150
           PGL G  G++G +GA GE G+ G  G               E G  G +GP      PG 
Sbjct: 543 PGLPGDKGERGAVGATGEQGLPGHEGMQGDDGPPGLPGLPGEMGPRGFIGPRGFPGLPGN 602

Query: 151 QGIPGDEGKRGPKGD------------------MGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            GIPG EG  G KG+                  +G PGPQG+ G  G  GP+G  G PG 
Sbjct: 603 PGIPGSEGPPGAKGNTGPPGPPGSPGSPGPMGAVGPPGPQGLLGPTGLVGPQGKPGIPGL 662

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNGEKGM 243
            G DG  G PG PG+ G  G  G+ G  G  G P         GK G PG  G  GEKG+
Sbjct: 663 SGADGSPGHPGNPGIPGTKGEQGLQGSQGPIGFPGVRGIKGDEGKRGSPGERGEKGEKGV 722

Query: 244 TGPRGN---RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPP 287
            G +G+   +G+ G++G  G P +   +       P  E S L+ PP
Sbjct: 723 EGEKGDVGAKGEPGLSGPQGIPGLEGLEGPKGFEGPRGE-SGLIGPP 768



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 92/179 (51%), Gaps = 27/179 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QG  G +G IG  G  G+KG+ G++G+PG  G  G +G+ G++G  G KG+ G  GPQ
Sbjct: 682 GEQGLQGSQGPIGFPGVRGIKGDEGKRGSPGERGEKGEKGVEGEKGDVGAKGEPGLSGPQ 741

Query: 173 GIPGDEGKRGPKGDMGYPGRIGL------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GIPG EG  GPKG  G  G  GL       G+ G PG  G  G PG  G  G  G++G  
Sbjct: 742 GIPGLEGLEGPKGFEGPRGESGLIGPPGEKGKTGPPGFVGYPGNPGEKGDKGQSGREGPN 801

Query: 227 GKDGIPGTNGTNGEK------------------GMTGPRGNRGK---SGINGVPGTPAI 264
           G  G  GTNG  GE+                  G+ GP+G+ G+    G+ G PG P I
Sbjct: 802 GDKGERGTNGAQGERGEPGPRGFRGARGRRGAEGLPGPKGDTGQPGPPGLQGEPGPPGI 860



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 91/194 (46%), Gaps = 27/194 (13%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S     PPG  G  G +GE GA G +G  G  G++G PG    PGP G+PG++G  
Sbjct: 1009 GPQGSQGSKGPPGPIGLKGDRGEPGAIGPIGRDGLPGQRGLPGS---PGPVGVPGEDGD- 1064

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPGRN 214
              KGD+G PG +G  G +G+ GP G +G       PG IGL G  G PGE G  G  G +
Sbjct: 1065 --KGDIGPPGEKGFKGSQGEAGPSGPVGIQGIRGEPGAIGLPGEKGPPGEIGRQGAKGED 1122

Query: 215  GMDGIP---------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            G  G                 G  G  G  G+ G  G  G  G  GPRG +G  G+ G P
Sbjct: 1123 GPVGASGPPGPVGPQGLPGAQGLKGEVGDTGLVGPVGPAGSPGAQGPRGPKGNEGLQGPP 1182

Query: 260  GTPAICAYKRESCS 273
            G   +   K E+ +
Sbjct: 1183 GPEGLQGQKGEAGA 1196



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 97/242 (40%), Gaps = 81/242 (33%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAK---GEMGVKGERGEKGAPGVVGPPGPQGI 153
            V   G          PG QGP G KG  G +   G  G++G++GE GAPG+ G  GP+G 
Sbjct: 1149 VGDTGLVGPVGPAGSPGAQGPRGPKGNEGLQGPPGPEGLQGQKGEAGAPGLPGLTGPEGK 1208

Query: 154  PGDEGKRGPKGDMGYP------------GPQ---------------------GIPGDEGK 180
            PG+ G  GPKG+ G              GP+                     G+ GD GK
Sbjct: 1209 PGERGPPGPKGEEGKSGPPGPPGERGINGPEGPKGNAGPPGFPGSPGEPGLIGVKGDSGK 1268

Query: 181  R------------------------GPKGDMGYPGRIGLDGRDGLPGE------PGLDGI 210
                                     GP G  G  G  G+ G  G PGE      PG  GI
Sbjct: 1269 DGEDGKPGDPGPPGEIGPPGKEGLPGPPGKQGSEGPAGVQGSPGPPGEKGDVGPPGTQGI 1328

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---------------GPRGNRGKSGI 255
            PG  G  G+PG  GLPG  G+PG  G NG  GM                GP+G+RGK G+
Sbjct: 1329 PGSIGPQGLPGPFGLPGVRGLPGLAGENGPPGMAGAIGAPGKVGPIGPKGPKGDRGKRGL 1388

Query: 256  NG 257
             G
Sbjct: 1389 KG 1390



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 84/178 (47%), Gaps = 39/178 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP+G  GE G KG++G  GE+G KG+ G  GP GP GI   +G RG  G +G PG 
Sbjct: 1050 PGSPGPVGVPGEDGDKGDIGPPGEKGFKGSQGEAGPSGPVGI---QGIRGEPGAIGLPGE 1106

Query: 172  QGIPGDEGKRGPKGD------------------------------------MGYPGRIGL 195
            +G PG+ G++G KG+                                    +G  G  G 
Sbjct: 1107 KGPPGEIGRQGAKGEDGPVGASGPPGPVGPQGLPGAQGLKGEVGDTGLVGPVGPAGSPGA 1166

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
             G  G  G  GL G PG  G+ G  G+ G PG  G+ G  G  GE+G  GP+G  GKS
Sbjct: 1167 QGPRGPKGNEGLQGPPGPEGLQGQKGEAGAPGLPGLTGPEGKPGERGPPGPKGEEGKS 1224



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 88/192 (45%), Gaps = 51/192 (26%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------- 160
           L G  G KGE G  G  G+ G++GE+GA   VG  G QG+PG EG +             
Sbjct: 527 LSGAPGMKGEQGVPGLPGLPGDKGERGA---VGATGEQGLPGHEGMQGDDGPPGLPGLPG 583

Query: 161 --------GPKGDMGYPGPQGIPGDEGKRGPKGD------------------MGYPGRIG 194
                   GP+G  G PG  GIPG EG  G KG+                  +G PG  G
Sbjct: 584 EMGPRGFIGPRGFPGLPGNPGIPGSEGPPGAKGNTGPPGPPGSPGSPGPMGAVGPPGPQG 643

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------RG 248
           L G  GL G  G  GIPG +G DG PG    PG  GIPGT G  G +G  GP      RG
Sbjct: 644 LLGPTGLVGPQGKPGIPGLSGADGSPGH---PGNPGIPGTKGEQGLQGSQGPIGFPGVRG 700

Query: 249 NRGKSGINGVPG 260
            +G  G  G PG
Sbjct: 701 IKGDEGKRGSPG 712



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 64/116 (55%), Gaps = 6/116 (5%)

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            D+G +G  G  G PGPQG  G +G  GP   KGD G PG IG  GRDGLPG+ GL   PG
Sbjct: 995  DKGVQGEPGKDGEPGPQGSQGSKGPPGPIGLKGDRGEPGAIGPIGRDGLPGQRGL---PG 1051

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G  G+PG+DG  G  G PG  G  G +G  GP G  G  GI G PG   +   K
Sbjct: 1052 SPGPVGVPGEDGDKGDIGPPGEKGFKGSQGEAGPSGPVGIQGIRGEPGAIGLPGEK 1107



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 87/184 (47%), Gaps = 36/184 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG----------------- 155
           G +G  G  GE G KGE GV+GE+G+ GA G  G  GPQGIPG                 
Sbjct: 703 GDEGKRGSPGERGEKGEKGVEGEKGDVGAKGEPGLSGPQGIPGLEGLEGPKGFEGPRGES 762

Query: 156 -------DEGKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDGLP--- 202
                  ++GK GP G +GYPG  G  GD+G   + GP GD G  G  G  G  G P   
Sbjct: 763 GLIGPPGEKGKTGPPGFVGYPGNPGEKGDKGQSGREGPNGDKGERGTNGAQGERGEPGPR 822

Query: 203 ------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                 G  G +G+PG  G  G PG  GL G+ G PG  G  G  G  G  G  GK GI 
Sbjct: 823 GFRGARGRRGAEGLPGPKGDTGQPGPPGLQGEPGPPGIEGPRGFVGAPGQIGLNGKDGIL 882

Query: 257 GVPG 260
           G PG
Sbjct: 883 GPPG 886



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 98/232 (42%), Gaps = 63/232 (27%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------------------VKGERGE 138
            V +QG          PG +GP G+ G  GAKGE G                   +G +GE
Sbjct: 1089 VGIQGIRGEPGAIGLPGEKGPPGEIGRQGAKGEDGPVGASGPPGPVGPQGLPGAQGLKGE 1148

Query: 139  KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
             G  G+VGP GP G PG +G RGPKG+ G    QG PG EG +G KG+ G PG  GL G 
Sbjct: 1149 VGDTGLVGPVGPAGSPGAQGPRGPKGNEGL---QGPPGPEGLQGQKGEAGAPGLPGLTGP 1205

Query: 199  DGLPGEPGLDGIPGRNGMD---------GIPGKDGLPGKD---------------GIPGT 234
            +G PGE G  G  G  G           GI G +G  G                 G+ G 
Sbjct: 1206 EGKPGERGPPGPKGEEGKSGPPGPPGERGINGPEGPKGNAGPPGFPGSPGEPGLIGVKGD 1265

Query: 235  NGTNGE------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +G +GE                  +G+ GP G +G  G  GV G+P     K
Sbjct: 1266 SGKDGEDGKPGDPGPPGEIGPPGKEGLPGPPGKQGSEGPAGVQGSPGPPGEK 1317



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 79/165 (47%), Gaps = 39/165 (23%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------------EG 158
           PPG  G  G  GE G KG+ G +G  G+KG  G  G  G +G PG             EG
Sbjct: 776 PPGFVGYPGNPGEKGDKGQSGREGPNGDKGERGTNGAQGERGEPGPRGFRGARGRRGAEG 835

Query: 159 KRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL-------- 207
             GPKGD G PGP   QG PG  G  GP+G +G PG+IGL+G+DG+ G PG         
Sbjct: 836 LPGPKGDTGQPGPPGLQGEPGPPGIEGPRGFVGAPGQIGLNGKDGILGPPGERGPVGDSG 895

Query: 208 ----------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                            G PG+ G  G PG  GLPG+ G PG  G
Sbjct: 896 PPGPPGAPGVIGPQGPAGEPGQPGEPGSPGNPGLPGELGPPGQQG 940



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 88/203 (43%), Gaps = 31/203 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------------VVGPPGPQGIP 154
           G +G IG +G  G  G  G+ G  G  GA G                   VGPPGPQG+ 
Sbjct: 586 GPRGFIGPRGFPGLPGNPGIPGSEGPPGAKGNTGPPGPPGSPGSPGPMGAVGPPGPQGLL 645

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G  GP+G        GIPG  G  G  G  G PG  G  G  GL G  G  G PG  
Sbjct: 646 GPTGLVGPQGK------PGIPGLSGADGSPGHPGNPGIPGTKGEQGLQGSQGPIGFPGVR 699

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK------ 268
           G+ G  GK G PG+ G  G  G  GEKG  G +G  G SG  G+PG   +   K      
Sbjct: 700 GIKGDEGKRGSPGERGEKGEKGVEGEKGDVGAKGEPGLSGPQGIPGLEGLEGPKGFEGPR 759

Query: 269 RESCSLLPNSETSQLLIPPTIVG 291
            ES  + P  E  +   PP  VG
Sbjct: 760 GESGLIGPPGEKGKTG-PPGFVG 781



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 66/126 (52%), Gaps = 21/126 (16%)

Query: 111  PPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            P GL GP G    +G  G  GE G  G  G  GAPG VGP GP+G  GD GKRG KG  G
Sbjct: 1334 PQGLPGPFGLPGVRGLPGLAGENGPPGMAGAIGAPGKVGPIGPKGPKGDRGKRGLKGHRG 1393

Query: 168  ---------------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                             GP+G+PG E   GPKG+ G PG +G  G DG PG PG++G+ G
Sbjct: 1394 ELGDAGMKGEEGEKGEQGPRGVPGSE---GPKGNQGPPGSMGFKGNDGPPGLPGMEGLIG 1450

Query: 213  RNGMDG 218
              G  G
Sbjct: 1451 PKGSAG 1456



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 86/165 (52%), Gaps = 12/165 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL GP G++G   ++G  GV+G  G  G  G VGPPG QGIPG  G +G  G  G PG +
Sbjct: 1291 GLPGPPGKQG---SEGPAGVQGSPGPPGEKGDVGPPGTQGIPGSIGPQGLPGPFGLPGVR 1347

Query: 173  GIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG------IPGKD 223
            G+PG  G+ GP    G +G PG++G  G  G  G+ G  G+ G  G  G        G+ 
Sbjct: 1348 GLPGLAGENGPPGMAGAIGAPGKVGPIGPKGPKGDRGKRGLKGHRGELGDAGMKGEEGEK 1407

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G+PG+ G  G +G  G  G +G  G  G+PG   +   K
Sbjct: 1408 GEQGPRGVPGSEGPKGNQGPPGSMGFKGNDGPPGLPGMEGLIGPK 1452



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 85/188 (45%), Gaps = 42/188 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGYP 169
           GL+GP G +G  G  G +G  GE+G+ G PG VG PG  G  GD+G   + GP GD G  
Sbjct: 748 GLEGPKGFEGPRGESGLIGPPGEKGKTGPPGFVGYPGNPGEKGDKGQSGREGPNGDKGER 807

Query: 170 GPQGIPGD------------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G  G  G+                  EG  GPKGD G PG  GL       GEPG  GI 
Sbjct: 808 GTNGAQGERGEPGPRGFRGARGRRGAEGLPGPKGDTGQPGPPGLQ------GEPGPPGIE 861

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTN---------------GEKGMTGPRGNRGKSGIN 256
           G  G  G PG+ GL GKDGI G  G                 G  G  GP G  G+ G  
Sbjct: 862 GPRGFVGAPGQIGLNGKDGILGPPGERGPVGDSGPPGPPGAPGVIGPQGPAGEPGQPGEP 921

Query: 257 GVPGTPAI 264
           G PG P +
Sbjct: 922 GSPGNPGL 929



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/107 (45%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGL 207
            +G+PG  GK+G +G  G  G  G PG++G  GP G  G PG I   GL G  GLPG  GL
Sbjct: 1290 EGLPGPPGKQGSEGPAGVQGSPGPPGEKGDVGPPGTQGIPGSIGPQGLPGPFGLPGVRGL 1349

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G+ G NG  G+ G  G PGK G  G  G  G++G  G +G+RG+ G
Sbjct: 1350 PGLAGENGPPGMAGAIGAPGKVGPIGPKGPKGDRGKRGLKGHRGELG 1396



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 89/226 (39%), Gaps = 63/226 (27%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-------- 149
             + G    T +  PPGLQG  G  G  G +G +G  G+ G  G  G++GPPG        
Sbjct: 835  GLPGPKGDTGQPGPPGLQGEPGPPGIEGPRGFVGAPGQIGLNGKDGILGPPGERGPVGDS 894

Query: 150  ----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP---------- 183
                            P G PG  G+ G  G+ G PG  G PG +GK GP          
Sbjct: 895  GPPGPPGAPGVIGPQGPAGEPGQPGEPGSPGNPGLPGELGPPGQQGKEGPQGPPGLPGKE 954

Query: 184  --------------KGDMGYPGRIGLDGR------------DGLPGEPGLDGIP---GRN 214
                          +G  G PG  G+ G              G+ GEPG DG P   G  
Sbjct: 955  GPPGSGGLPGFPGERGLSGLPGMPGIKGEIGPPGLPGPSGDKGVQGEPGKDGEPGPQGSQ 1014

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G PG  GL G  G PG  G  G  G+ G RG  G  G  GVPG
Sbjct: 1015 GSKGPPGPIGLKGDRGEPGAIGPIGRDGLPGQRGLPGSPGPVGVPG 1060



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 71/148 (47%), Gaps = 36/148 (24%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGEIG  G  G  G++G +G PG  G PGPQG    +G +GP      PGP 
Sbjct: 973  GLPGMPGIKGEIGPPGLPGPSGDKGVQGEPGKDGEPGPQG---SQGSKGP------PGPI 1023

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+         KGD G PG IG  GRDGLPG+                   GLPG  G  
Sbjct: 1024 GL---------KGDRGEPGAIGPIGRDGLPGQ------------------RGLPGSPGPV 1056

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G +G+KG  GP G +G  G  G  G
Sbjct: 1057 GVPGEDGDKGDIGPPGEKGFKGSQGEAG 1084



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 95/253 (37%), Gaps = 90/253 (35%)

Query: 108  EYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEK------------------------G 140
            E  PPG++GP   +G  G+IG  G+ G+ G  GE+                        G
Sbjct: 854  EPGPPGIEGPRGFVGAPGQIGLNGKDGILGPPGERGPVGDSGPPGPPGAPGVIGPQGPAG 913

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDM---------------------------------G 167
             PG  G PG  G PG  G+ GP G                                   G
Sbjct: 914  EPGQPGEPGSPGNPGLPGELGPPGQQGKEGPQGPPGLPGKEGPPGSGGLPGFPGERGLSG 973

Query: 168  YPGPQGIPG------------DEGKRGPKGDMGYPGRIGLDGRDGLP---------GEPG 206
             PG  GI G            D+G +G  G  G PG  G  G  G P         GEPG
Sbjct: 974  LPGMPGIKGEIGPPGLPGPSGDKGVQGEPGKDGEPGPQGSQGSKGPPGPIGLKGDRGEPG 1033

Query: 207  L------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS---GING 257
                   DG+PG+ G+ G PG  G+PG+DG  G  G  GEKG  G +G  G S   GI G
Sbjct: 1034 AIGPIGRDGLPGQRGLPGSPGPVGVPGEDGDKGDIGPPGEKGFKGSQGEAGPSGPVGIQG 1093

Query: 258  VPGTPAICAYKRE 270
            + G P       E
Sbjct: 1094 IRGEPGAIGLPGE 1106



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 86/229 (37%), Gaps = 84/229 (36%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---- 181
            A+G  G KG+ G+ G PG+ G PGP GI G  G  G  G +G  G  GI G  G+R    
Sbjct: 833  AEGLPGPKGDTGQPGPPGLQGEPGPPGIEGPRGFVGAPGQIGLNGKDGILGPPGERGPVG 892

Query: 182  -----------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---------- 214
                             GP G+ G PG  G  G  GLPGE G  G  G+           
Sbjct: 893  DSGPPGPPGAPGVIGPQGPAGEPGQPGEPGSPGNPGLPGELGPPGQQGKEGPQGPPGLPG 952

Query: 215  -----------------GMDGIPGKDGL---------------------PGKDGIPGTNG 236
                             G+ G+PG  G+                     PGKDG PG  G
Sbjct: 953  KEGPPGSGGLPGFPGERGLSGLPGMPGIKGEIGPPGLPGPSGDKGVQGEPGKDGEPGPQG 1012

Query: 237  TNGEKGMTGP---RGNRGKSGI------------NGVPGTPAICAYKRE 270
            + G KG  GP   +G+RG+ G              G+PG+P       E
Sbjct: 1013 SQGSKGPPGPIGLKGDRGEPGAIGPIGRDGLPGQRGLPGSPGPVGVPGE 1061



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 85/214 (39%), Gaps = 66/214 (30%)

Query: 121 KGEIGAKGEMGVKGERG---------------------EKGAPGVVGPPGPQGIPGDEGK 159
           KGE G  GE G +GERG                       GAPG+ G  G  G+PG  G 
Sbjct: 489 KGEPGEIGEPGPRGERGIPGNTGREGRRGRPGRDGERGLSGAPGMKGEQGVPGLPGLPGD 548

Query: 160 RGPKGDMGYPGPQGIPGDEGKR---------------------GPKGDMGYPGRIGLDGR 198
           +G +G +G  G QG+PG EG +                     GP+G  G PG  G+ G 
Sbjct: 549 KGERGAVGATGEQGLPGHEGMQGDDGPPGLPGLPGEMGPRGFIGPRGFPGLPGNPGIPGS 608

Query: 199 DGLPGEPG------------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           +G PG  G                    G PG  G+ G  G  G  GK GIPG +G +G 
Sbjct: 609 EGPPGAKGNTGPPGPPGSPGSPGPMGAVGPPGPQGLLGPTGLVGPQGKPGIPGLSGADGS 668

Query: 241 ------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
                  G+ G +G +G  G  G  G P +   K
Sbjct: 669 PGHPGNPGIPGTKGEQGLQGSQGPIGFPGVRGIK 702


>gi|395532734|ref|XP_003768423.1| PREDICTED: collagen alpha-1(I) chain isoform 1 [Sarcophilus
           harrisii]
          Length = 1454

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 82/150 (54%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G+ GAKG  G  G  G  G PG  GP GPQG  G  G +G  G+ G PG +G PG +
Sbjct: 380 GADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNSGEPGTPGNKGDPGAK 439

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G+ GP G  G PG  G +G+ G  GEPG  G+PG  G  G PG  G PG DG+ G  G  
Sbjct: 440 GEPGPVGVQGPPGPAGEEGKRGSRGEPGPAGLPGPAGERGGPGSRGFPGADGVAGPKGAP 499

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           GE+G  GP G +G  G +G PG   +   K
Sbjct: 500 GERGAPGPAGPKGSPGESGRPGEAGLPGAK 529



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/147 (46%), Positives = 79/147 (53%), Gaps = 3/147 (2%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QGP G  G  G  GE G  G +G+ GA G  GP G QG PG  G+ G +G  G PG
Sbjct: 408 PSGPQGPSGAPGPKGNSGEPGTPGNKGDPGAKGEPGPVGVQGPPGPAGEEGKRGSRGEPG 467

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           P G+PG  G+RG  G  G+PG  G+ G  G PGE    G PG  G  G PG+ G PG+ G
Sbjct: 468 PAGLPGPAGERGGPGSRGFPGADGVAGPKGAPGE---RGAPGPAGPKGSPGESGRPGEAG 524

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
           +PG  G  G  G  GP G  G  G  G
Sbjct: 525 LPGAKGLTGSPGSPGPDGKTGPPGPAG 551



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 81/177 (45%), Gaps = 33/177 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
           PG +G  G KGE G  G  G  G  GE+G  G  G PGP G+PG  G+RG  G  G+P  
Sbjct: 430 PGNKGDPGAKGEPGPVGVQGPPGPAGEEGKRGSRGEPGPAGLPGPAGERGGPGSRGFPGA 489

Query: 170 ----GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
               GP+G PG+ G  GP G  G PG  G  G  GLPG  GL G PG  G DG  G  G 
Sbjct: 490 DGVAGPKGAPGERGAPGPAGPKGSPGESGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGP 549

Query: 226 PGKD------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G+D                  G PG  G  GE          GK+G  GVPG P  
Sbjct: 550 AGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEP---------GKAGERGVPGPPGA 597



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 71/152 (46%), Gaps = 18/152 (11%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              +G   S  E  P GL GP G++G  G++G  G  G  G KGAPG  G PGP G  G 
Sbjct: 454 AGEEGKRGSRGEPGPAGLPGPAGERGGPGSRGFPGADGVAGPKGAPGERGAPGPAGPKGS 513

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---------------GRDGL 201
            G+ G  G+ G PG +G+ G  G  GP G  G PG  G D               G  G 
Sbjct: 514 PGESGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGF 573

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGL---PGKDG 230
           PG  G  G PG+ G  G+PG  G     GKDG
Sbjct: 574 PGPKGAAGEPGKAGERGVPGPPGAVGPAGKDG 605



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 83/169 (49%), Gaps = 27/169 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKG-- 164
           G  GP+G +G  G  GE G +G RGE G  G+ GP      PG +G PG +G  GPKG  
Sbjct: 440 GEPGPVGVQGPPGPAGEEGKRGSRGEPGPAGLPGPAGERGGPGSRGFPGADGVAGPKGAP 499

Query: 165 -DMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI- 219
            + G PGP   +G PG+ G+    G+ G PG  GL G  G PG  G  G PG  G DG  
Sbjct: 500 GERGAPGPAGPKGSPGESGR---PGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRP 556

Query: 220 -----------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                       G  G PG  G  G  G  GE+G+ GP G  G +G +G
Sbjct: 557 GPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDG 605



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 79/186 (42%), Gaps = 51/186 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------ 166
           G+ GP G  GE GA G  G KG  GE G PG  G PG +G+ G  G  GP G        
Sbjct: 491 GVAGPKGAPGERGAPGPAGPKGSPGESGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPA 550

Query: 167 ---------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                                G+PGP+G  G+ GK G +G  G PG +G  G+DG     
Sbjct: 551 GQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQ 610

Query: 203 ------------GEPGLDGIPGRNGMDGI---------PGKDGLPGKDGIPGTNGTNGEK 241
                       GE G  G PG  G+ G          PG+ G+PG  G PG +G  GE+
Sbjct: 611 GAPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDAGAPGPSGARGER 670

Query: 242 GMTGPR 247
           G  G R
Sbjct: 671 GFPGER 676



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 88/219 (40%), Gaps = 78/219 (35%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGKRGPKGD 165
           +G  G  GA GE G  GERG  G PG VGP G  G              G+ G++GP G 
Sbjct: 571 MGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGS 630

Query: 166 MGY---------------PGPQGIPGDEGKRGP---KGDMGYPGRI-------------- 193
            G+               PG QG+PGD G  GP   +G+ G+PG                
Sbjct: 631 PGFQGLPGPAGPPGEAGKPGEQGVPGDAGAPGPSGARGERGFPGERGVQGPPGPQGPRGA 690

Query: 194 -GLDGRDG---------------------LPGEPGLDGIPGRNG--MDGIP-GKDGLPGK 228
            G  G DG                     +PGE G  G+PG  G   D  P G DG PGK
Sbjct: 691 NGAPGNDGAKGDAGAPGAPGGQGPPGLQGMPGERGAAGLPGAKGDRGDAGPKGADGAPGK 750

Query: 229 DGIPG---------TNGTNGEKGMTGPRGNRGKSGINGV 258
           DG+ G           G +G+KG +GP G  G +G  G 
Sbjct: 751 DGVRGLTGPIGPPGPAGPSGDKGESGPSGPAGPTGARGA 789



 Score = 46.2 bits (108), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 43/85 (50%), Gaps = 9/85 (10%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           GD G  G  G PG+ G  GP+G  G PG  GL         PG+ G  G +G+DG  G  
Sbjct: 221 GDDGEAGKPGRPGERGPPGPQGARGLPGTAGL---------PGMKGHRGFSGLDGAKGDS 271

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRG 248
           G  G  G PG+ G NG  G  GPRG
Sbjct: 272 GPAGPKGEPGSPGENGAPGQMGPRG 296



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 47/104 (45%), Gaps = 18/104 (17%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR- 213
            G  G  GP G  G PGPQGI G  G  G  G  G  G  GL G  G PG+ G  G+ G  
Sbjct: 926  GSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGVSGER 985

Query: 214  -----------------NGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                             +G +G PG +G PG+DG PG  G  GE
Sbjct: 986  GPPGPAGPPGLAGPPGESGREGSPGAEGSPGRDGAPGPKGDRGE 1029



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GE G+ G PG  GPPGPQ   G+PG  G  G KG  G+ G  G  GD G  GPKG+ 
Sbjct: 221 GDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDSGPAGPKGEP 280

Query: 188 GYPGRIGLDGR 198
           G PG  G  G+
Sbjct: 281 GSPGENGAPGQ 291



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 83/230 (36%), Gaps = 67/230 (29%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM- 166
           E  PPG QG  G  G  G  G  G +G  G  GA G  GP GP+G PG  G+ G  G M 
Sbjct: 234 ERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDSGPAGPKGEPGSPGENGAPGQMG 293

Query: 167 --------------------------------------------------GYPGPQGIPG 176
                                                             G  GPQG  G
Sbjct: 294 PRGLPGERGRPGPPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGSRG 353

Query: 177 DEGKRGPK---------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            EG +G +               G+ G  G+ G  G +G PG  G  G PG  G  G  G
Sbjct: 354 SEGPQGVRGEPGPPGPAGSPGPSGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQG 413

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             G PG  G  G  GT G KG  G +G  G  G+ G PG PA    KR S
Sbjct: 414 PSGAPGPKGNSGEPGTPGNKGDPGAKGEPGPVGVQGPPG-PAGEEGKRGS 462



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G DG  G PG PG  G PG  G  G      LPG  G+PG  G  G  G+ G +G+ G +
Sbjct: 221 GDDGEAGKPGRPGERGPPGPQGARG------LPGTAGLPGMKGHRGFSGLDGAKGDSGPA 274

Query: 254 GINGVPGTPA 263
           G  G PG+P 
Sbjct: 275 GPKGEPGSPG 284



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 24/99 (24%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---- 166
            P G  G  G +G  G +G +G+ G+RGE+G PG+   PGP G PG +G  G  G+     
Sbjct: 933  PAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL---PGPSGEPGKQGPSGVSGERGPPG 989

Query: 167  -----------------GYPGPQGIPGDEGKRGPKGDMG 188
                             G PG +G PG +G  GPKGD G
Sbjct: 990  PAGPPGLAGPPGESGREGSPGAEGSPGRDGAPGPKGDRG 1028



 Score = 40.0 bits (92), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 81/233 (34%), Gaps = 96/233 (41%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PG++G  G  G  GAKG+ G  G +GE G+PG        G PG  G R           
Sbjct: 253 PGMKGHRGFSGLDGAKGDSGPAGPKGEPGSPGE------NGAPGQMGPRGLPGERGRPGP 306

Query: 161 ----------------------------------------GPKGDMGYPGPQGI------ 174
                                                   GP+G  G  GPQG+      
Sbjct: 307 PGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGSRGSEGPQGVRGEPGP 366

Query: 175 ------------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
                       PG +G+ G KG  G PG        G PG PG  G  G  G  G PG 
Sbjct: 367 PGPAGSPGPSGNPGADGQPGAKGANGAPGIA------GAPGFPGARGPSGPQGPSGAPGP 420

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGP---------------RGNRGKSGINGVPG 260
            G  G+ G PG  G  G KG  GP               RG+RG+ G  G+PG
Sbjct: 421 KGNSGEPGTPGNKGDPGAKGEPGPVGVQGPPGPAGEEGKRGSRGEPGPAGLPG 473



 Score = 40.0 bits (92), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 73/183 (39%), Gaps = 63/183 (34%)

Query: 134  GERGEKGAPGVVGPPGPQGIPGDEGK------------------------RGPKGDM--- 166
            G  G KGA G  GPPG  G PG  G+                        +GP+G+    
Sbjct: 848  GAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPI 907

Query: 167  ------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEP 205
                              G PG  G  G  G  GP+G  G  G +GL G+    G PG P
Sbjct: 908  GRPGEVGPPGPPGPSGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLP 967

Query: 206  GLDGIPGRNGMDGIPGKDGLP---------------GKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G PG+ G  G+ G+ G P               G++G PG  G+ G  G  GP+G+R
Sbjct: 968  GPSGEPGKQGPSGVSGERGPPGPAGPPGLAGPPGESGREGSPGAEGSPGRDGAPGPKGDR 1027

Query: 251  GKS 253
            G++
Sbjct: 1028 GET 1030


>gi|395534382|ref|XP_003769221.1| PREDICTED: collagen alpha-1(XXI) chain isoform 1 [Sarcophilus
           harrisii]
          Length = 957

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 94/180 (52%), Gaps = 21/180 (11%)

Query: 110 CPPG---LQGPIG------------QKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ 151
           CPPG   LQGP G            Q G+ G  G  G+ G  G  G+PG+ G    PG +
Sbjct: 446 CPPGKPGLQGPKGEPGQPGNHGYPGQPGQDGKPGYQGISGNPGIPGSPGIQGARGLPGYK 505

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G PG  G +G +G  G+PG  G+PG +G  GPKG+ G PG  G  G  G  G  G  G+P
Sbjct: 506 GEPGRGGNKGDRGLPGFPGQHGMPGSKGDMGPKGEKGSPGFYGKKGAKGEKGNTGFPGLP 565

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           GR+G  G  GKDGL G  G     G  G++G  GP G RG+ GI G PG+  +   K E+
Sbjct: 566 GRSGEPGRDGKDGLMGSQGF---KGETGQQGAPGPEGQRGEPGIPGFPGSQGLMGQKGET 622



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/167 (41%), Positives = 87/167 (52%), Gaps = 27/167 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGVVGPPGPQGIPGDEGKR 160
           GL G  GQ G  G+KG+MG KGE+G  G              G  G PG  G PG +GK 
Sbjct: 518 GLPGFPGQHGMPGSKGDMGPKGEKGSPGFYGKKGAKGEKGNTGFPGLPGRSGEPGRDGKD 577

Query: 161 GPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G  G+ G    QG PG EG+RG  G  G+PG  GL G+ G  G PG  G  G  G++
Sbjct: 578 GLMGSQGFKGETGQQGAPGPEGQRGEPGIPGFPGSQGLMGQKGETGPPGPQGKKGAPGLN 637

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G+ G+DG PG+ G PG             +GNRG+ G+ G+ G+P I
Sbjct: 638 GLMGQDGSPGQPGTPGL------------KGNRGEPGVQGISGSPGI 672



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 86/174 (49%), Gaps = 27/174 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  G  G+ G+ G  G  G KGE G++GAPG     G PG  G PG +G  G KG+ G 
Sbjct: 565 PGRSGEPGRDGKDGLMGSQGFKGETGQQGAPGPEGQRGEPGIPGFPGSQGLMGQKGETGP 624

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGPQG          KG  G  G +G DG  G PG PGL G  G  G+ GI G  G+ G+
Sbjct: 625 PGPQGK---------KGAPGLNGLMGQDGSPGQPGTPGLKGNRGEPGVQGISGSPGIKGE 675

Query: 229 DGI---------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G+               PG  G NG  G  GP+G +G++G +G PG   I  +
Sbjct: 676 QGLSGPPGEPGYPGLPGTPGKKGDNGNPGEKGPQGQKGENGRSGDPGPQGIPGH 729



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 86/183 (46%), Gaps = 24/183 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  QGF   T +   PG +G  G+ G  G  G  G+ G++GE       GPPGPQG  G
Sbjct: 579 LMGSQGFKGETGQQGAPGPEGQRGEPGIPGFPGSQGLMGQKGE------TGPPGPQGKKG 632

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL-------------- 201
             G  G  G  G PG  G PG +G RG  G  G  G  G+ G  GL              
Sbjct: 633 APGLNGLMGQDGSPGQPGTPGLKGNRGEPGVQGISGSPGIKGEQGLSGPPGEPGYPGLPG 692

Query: 202 -PGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG+ G +G PG  G  G  G++G    PG  GIPG  G  GEKG  G  G+RG SG  G
Sbjct: 693 TPGKKGDNGNPGEKGPQGQKGENGRSGDPGPQGIPGHLGAKGEKGEKGDSGSRGVSGPKG 752

Query: 258 VPG 260
             G
Sbjct: 753 ESG 755



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 82/171 (47%), Gaps = 18/171 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG +GQKGE G  G  G KG  G  G  G  G PG  G PG +G RG  G  G  G 
Sbjct: 610 PGSQGLMGQKGETGPPGPQGKKGAPGLNGLMGQDGSPGQPGTPGLKGNRGEPGVQGISGS 669

Query: 172 QGIPGDEGKR---------------GPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGR 213
            GI G++G                 G KGD G PG  G  G+   +G  G+PG  GIPG 
Sbjct: 670 PGIKGEQGLSGPPGEPGYPGLPGTPGKKGDNGNPGEKGPQGQKGENGRSGDPGPQGIPGH 729

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G+ G  G  G+ G  G +G  G+ GP G RG+ G  G  G P +
Sbjct: 730 LGAKGEKGEKGDSGSRGVSGPKGESGMDGLMGPIGPRGQHGETGPRGPPGL 780



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 88/188 (46%), Gaps = 27/188 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------D 156
           PGL G +GQ G  G  G  G+KG RGE G  G+ G PG +G  G                
Sbjct: 634 PGLNGLMGQDGSPGQPGTPGLKGNRGEPGVQGISGSPGIKGEQGLSGPPGEPGYPGLPGT 693

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            GK+G  G+ G  GPQG  G+ G+ G  G  G PG +G  G  G  G+ G  G+ G  G 
Sbjct: 694 PGKKGDNGNPGEKGPQGQKGENGRSGDPGPQGIPGHLGAKGEKGEKGDSGSRGVSGPKGE 753

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G+         DG+ G  G  G+ G TGP   RG  G++G PG      + R+ C+ + 
Sbjct: 754 SGM---------DGLMGPIGPRGQHGETGP---RGPPGLDGKPGREFSEQFIRQVCTDVL 801

Query: 277 NSETSQLL 284
            ++   LL
Sbjct: 802 RAQLPVLL 809



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---IPGKDGLPGKDGI 231
           PG  G +GPKG+ G PG        G PG+PG DG PG  G+ G   IPG  G+ G  G+
Sbjct: 448 PGKPGLQGPKGEPGQPGN------HGYPGQPGQDGKPGYQGISGNPGIPGSPGIQGARGL 501

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG  G  G  G  G RG  G  G +G+PG+      K E  S
Sbjct: 502 PGYKGEPGRGGNKGDRGLPGFPGQHGMPGSKGDMGPKGEKGS 543


>gi|357619627|gb|EHJ72120.1| putative collagen alpha-2 precursor [Danaus plexippus]
          Length = 1537

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 99/197 (50%), Gaps = 24/197 (12%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQG-- 152
              QG   S      PG +G  GQ G  GA GE G KGE G  G PG    +GP GPQG  
Sbjct: 911  GQQGAQGSPGISGEPGQRGLPGQPGAKGAHGEQGHKGEIGRAGLPGRPGDMGPQGPQGSP 970

Query: 153  -------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE- 204
                   +PG +G  G  G  G PGPQG+ G +G  GPKG+ G  G  G  G+ G+PG+ 
Sbjct: 971  GPTGAPGLPGAKGSTGDTGRSGPPGPQGLIGPQGPEGPKGERGAEGETGPQGQQGIPGQA 1030

Query: 205  --------PGLDGIPGRNGMDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRGNRGKS 253
                    PGL G PG  G+ G+ G+ G+PGK   DG PG  G  G +GMTGP G  G  
Sbjct: 1031 GERGPSGLPGLTGAPGPQGLRGVQGESGVPGKPGADGAPGPIGAPGPQGMTGPMGEPGPE 1090

Query: 254  GINGVPGTPAICAYKRE 270
            G  G  G P I   + E
Sbjct: 1091 GRPGKLGQPGIPGRQGE 1107



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 85/154 (55%), Gaps = 6/154 (3%)

Query: 113 GLQGPIG------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G+QGP G      Q GE+G  G  G  G  GEKG  G  G  GPQG PG  G  G  GD 
Sbjct: 440 GMQGPRGEPGRNGQSGEVGPPGLAGRDGTPGEKGVQGQTGAAGPQGFPGPRGTPGVAGDP 499

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG +G+PG  G RGPKG++G  G IG  G  G+PG  G +G  G+ G+ G PG  G  
Sbjct: 500 GLPGTKGMPGQPGDRGPKGEIGLRGEIGAPGPRGMPGGIGPEGKRGKRGLRGPPGNLGPQ 559

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G+ G  G NG  G  GP+G  G+ G  G+PG
Sbjct: 560 GDRGLQGLRGLNGADGPMGPKGQTGERGAVGLPG 593



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 90/172 (52%), Gaps = 15/172 (8%)

Query: 112 PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QG  G +G   + GAKGE G+ GE+G  G PG +GP GP G  G  G+RG +G  G 
Sbjct: 334 PGIQGLKGHRGFDGKDGAKGEQGLPGEKGPTGLPGPMGPNGPAGPVGPRGERGREGPAGV 393

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------DGIPGRNGM 216
           PG +G+ G  G  G  G++G PG  G  G  GL GE G              G PGRNG 
Sbjct: 394 PGIRGVDGAPGSPGLMGNIGKPGAPGFPGSPGLKGEQGAVGPKGSQGMQGPRGEPGRNGQ 453

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  GL G+DG PG  G  G+ G  GP+G  G  G  GV G P +   K
Sbjct: 454 SGEVGPPGLAGRDGTPGEKGVQGQTGAAGPQGFPGPRGTPGVAGDPGLPGTK 505



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 87/162 (53%), Gaps = 6/162 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G++G  GA G  G +G +G +G PG++G PG +G+ G+ GK    GD+G PG 
Sbjct: 622 PGKSGQPGERGIPGADGRPGEQGLQGLQGPPGLIGSPGERGLQGEHGK---DGDVGQPGA 678

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G  GD G+ G  G  G  G +G  G  G  G  G  G P   G+ G PG  G  GKDG 
Sbjct: 679 PGAKGDAGRDGSPGSQGPQGPVGATGERGPIGPAGPTGFP---GLPGAPGSPGPAGKDGE 735

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG +G  G  G TG RG RG SG  G PG P +   K E+ +
Sbjct: 736 PGVSGPAGPPGATGQRGERGFSGERGSPGLPGVAGEKGEAGA 777



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 106/212 (50%), Gaps = 23/212 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPG---PQGIP 154
           G    + E  PPGL G  G  GE G +G+ G  G +G    +G PGV G PG    +G+P
Sbjct: 449 GRNGQSGEVGPPGLAGRDGTPGEKGVQGQTGAAGPQGFPGPRGTPGVAGDPGLPGTKGMP 508

Query: 155 GDEGKRGPKGDMGY------PGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G  G RGPKG++G       PGP+G+PG    EGKRG +G  G PG +G  G  GL    
Sbjct: 509 GQPGDRGPKGEIGLRGEIGAPGPRGMPGGIGPEGKRGKRGLRGPPGNLGPQGDRGL---Q 565

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
           GL G+ G +G  G  G+ G  G  G+PG  G+ G+ G  GP+G  G  G  G PG P   
Sbjct: 566 GLRGLNGADGPMGPKGQTGERGAVGLPGPKGSTGDIGRPGPQGLLGPRGFMGRPGIPGKS 625

Query: 266 AYKRE----SCSLLPNSETSQ-LLIPPTIVGS 292
               E         P  +  Q L  PP ++GS
Sbjct: 626 GQPGERGIPGADGRPGEQGLQGLQGPPGLIGS 657



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 86/163 (52%), Gaps = 18/163 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPG------DEGKR 160
           G  GP+G +GE G +G  GV G RG  GAPG       +G PG  G PG      ++G  
Sbjct: 374 GPAGPVGPRGERGREGPAGVPGIRGVDGAPGSPGLMGNIGKPGAPGFPGSPGLKGEQGAV 433

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GPKG  G  GP+G PG  G+    G++G PG   L GRDG PGE G+ G  G  G  G P
Sbjct: 434 GPKGSQGMQGPRGEPGRNGQ---SGEVGPPG---LAGRDGTPGEKGVQGQTGAAGPQGFP 487

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G PG  G PG  GT G  G  G RG +G+ G+ G  G P 
Sbjct: 488 GPRGTPGVAGDPGLPGTKGMPGQPGDRGPKGEIGLRGEIGAPG 530



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 96/205 (46%), Gaps = 42/205 (20%)

Query: 98   AMQGFCNSTKEYCP---PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
              QG      E  P   PGL G  G +G  G +GE GV G+ G  GAPG +G PGPQG+ 
Sbjct: 1022 GQQGIPGQAGERGPSGLPGLTGAPGPQGLRGVQGESGVPGKPGADGAPGPIGAPGPQGMT 1081

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDE---------------------------------GKR 181
            G  G+ GP+G  G  G  GIPG +                                 G+R
Sbjct: 1082 GPMGEPGPEGRPGKLGQPGIPGRQGEKGPMGQPGQPGPPGSPGVQGPPGSSGPPGATGER 1141

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            GP+G+ G PG  G  G  G  G PG+DGI    G NG DG  G  GLPG  G+ GT G  
Sbjct: 1142 GPRGESGSPGIEGPQGPSGKQGPPGMDGIKGERGENGADGPKGHAGLPGLPGLIGTPGRQ 1201

Query: 239  GEKGMT---GPRGNRGKSGINGVPG 260
            G++G+    GP G  G +G  G PG
Sbjct: 1202 GDRGLPGAIGPPGKDGDAGPRGPPG 1226



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/156 (44%), Positives = 88/156 (56%), Gaps = 6/156 (3%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G  GE G  G  G  G+ G++G+PG+ G  G +G  G +GK G KG+ G
Sbjct: 297 ERGPQGLPGKDGSPGEDGEPGPAGAIGQPGQRGSPGIPGIQGLKGHRGFDGKDGAKGEQG 356

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   GP G+PG  G  GP G +G  G  G +G  G+PG  G+DG PG  G+ G  GK G
Sbjct: 357 LPGEKGPTGLPGPMGPNGPAGPVGPRGERGREGPAGVPGIRGVDGAPGSPGLMGNIGKPG 416

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            P   G PG+ G  GE+G  GP+G++G  G  G PG
Sbjct: 417 AP---GFPGSPGLKGEQGAVGPKGSQGMQGPRGEPG 449



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 76/146 (52%), Gaps = 15/146 (10%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L   +G    T    PPG QG IG +G  G KGE G +GE          GP G QGIPG
Sbjct: 978  LPGAKGSTGDTGRSGPPGPQGLIGPQGPEGPKGERGAEGE---------TGPQGQQGIPG 1028

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
              G+RGP G    PG  G PG +G RG +G+ G PG+ G DG  G  G PG  G+    G
Sbjct: 1029 QAGERGPSG---LPGLTGAPGPQGLRGVQGESGVPGKPGADGAPGPIGAPGPQGM---TG 1082

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEK 241
              G PG +G PGK G PG  G  GEK
Sbjct: 1083 PMGEPGPEGRPGKLGQPGIPGRQGEK 1108



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 93/191 (48%), Gaps = 39/191 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           PG+ GP G  G  G +GE G            V GE+GE GA G+ GPPG +G  G +G 
Sbjct: 736 PGVSGPAGPPGATGQRGERGFSGERGSPGLPGVAGEKGEAGAQGLDGPPGAEGPRGSKGH 795

Query: 160 RGPKGDMGYPGPQ---GIPGDEGKR---GPKGDMGYPGRIGLD----------------- 196
            GP G MG PG +   G+PG++G+R   GP+G  G  GR G                   
Sbjct: 796 PGPMGTMGLPGLRGMSGLPGEKGERGSSGPQGPEGPAGRQGEQGPQGPIGPAGPPGEPAE 855

Query: 197 -GRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G PG PG  G PG  G  G P   G +GLPG  G+ G  G  G++G  GP+G +G 
Sbjct: 856 RGEPGTPGMPGESGAPGSTGERGHPGPQGNNGLPGPPGLTGMPGLKGDRGYAGPKGQQGA 915

Query: 253 SGINGVPGTPA 263
            G  G+ G P 
Sbjct: 916 QGSPGISGEPG 926



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 95/195 (48%), Gaps = 28/195 (14%)

Query: 94  IPLVAMQ-GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVG 146
           +P VA + G   +     PPG +GP G KG  G  G MG+ G RG      EKG  G  G
Sbjct: 765 LPGVAGEKGEAGAQGLDGPPGAEGPRGSKGHPGPMGTMGLPGLRGMSGLPGEKGERGSSG 824

Query: 147 PPGPQGIPGDEGK------------------RGPKGDMGYPGPQGIPGDEGKR---GPKG 185
           P GP+G  G +G+                  RG  G  G PG  G PG  G+R   GP+G
Sbjct: 825 PQGPEGPAGRQGEQGPQGPIGPAGPPGEPAERGEPGTPGMPGESGAPGSTGERGHPGPQG 884

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           + G PG  GL G  GL G+ G  G  G+ G  G PG  G PG+ G+PG  G  G  G  G
Sbjct: 885 NNGLPGPPGLTGMPGLKGDRGYAGPKGQQGAQGSPGISGEPGQRGLPGQPGAKGAHGEQG 944

Query: 246 PRGNRGKSGINGVPG 260
            +G  G++G+ G PG
Sbjct: 945 HKGEIGRAGLPGRPG 959



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 86/193 (44%), Gaps = 12/193 (6%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L    G   S  E    GLQG  G+ G++G  G  G KG+ G  G+PG  GP GP G  G
Sbjct: 648 LQGPPGLIGSPGER---GLQGEHGKDGDVGQPGAPGAKGDAGRDGSPGSQGPQGPVGATG 704

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD------MGYPGRIGLDGRDGLPGEPGLDG 209
           + G  GP G  G+PG  G PG  G  G  G+       G PG  G  G  G  GE G  G
Sbjct: 705 ERGPIGPAGPTGFPGLPGAPGSPGPAGKDGEPGVSGPAGPPGATGQRGERGFSGERGSPG 764

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
           +PG  G  G  G  GL   DG PG  G  G KG  GP G  G  G+ G+ G P     + 
Sbjct: 765 LPGVAGEKGEAGAQGL---DGPPGAEGPRGSKGHPGPMGTMGLPGLRGMSGLPGEKGERG 821

Query: 270 ESCSLLPNSETSQ 282
            S    P     +
Sbjct: 822 SSGPQGPEGPAGR 834



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 88/159 (55%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  GQ G+ G KGE+G++GE G  G  G+ G  GP+G  G  G RGP G++G  G 
Sbjct: 502 PGTKGMPGQPGDRGPKGEIGLRGEIGAPGPRGMPGGIGPEGKRGKRGLRGPPGNLGPQGD 561

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G+ G  G  G  G MG  G+ G  G  GLPG  G  G  GR G  G+ G  G  G+ GI
Sbjct: 562 RGLQGLRGLNGADGPMGPKGQTGERGAVGLPGPKGSTGDIGRPGPQGLLGPRGFMGRPGI 621

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           PG +G  GE+G+ G  G  G+ G+ G+ G P +     E
Sbjct: 622 PGKSGQPGERGIPGADGRPGEQGLQGLQGPPGLIGSPGE 660



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 101/186 (54%), Gaps = 36/186 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGER---------GEKGAPGVVGPP---GPQ-------- 151
           PG  G  G KGEIG +GE+G  G R         G++G  G+ GPP   GPQ        
Sbjct: 508 PGQPGDRGPKGEIGLRGEIGAPGPRGMPGGIGPEGKRGKRGLRGPPGNLGPQGDRGLQGL 567

Query: 152 -GIPGDEGKRGPKGD------MGYPGPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGL 201
            G+ G +G  GPKG       +G PGP+G  GD G+ GP+G +   G+ GR G+ G+ G 
Sbjct: 568 RGLNGADGPMGPKGQTGERGAVGLPGPKGSTGDIGRPGPQGLLGPRGFMGRPGIPGKSGQ 627

Query: 202 PGE---PGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           PGE   PG DG PG  G+ G+ G  GL   PG+ G+ G +G +G+ G  G  G +G +G 
Sbjct: 628 PGERGIPGADGRPGEQGLQGLQGPPGLIGSPGERGLQGEHGKDGDVGQPGAPGAKGDAGR 687

Query: 256 NGVPGT 261
           +G PG+
Sbjct: 688 DGSPGS 693



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 91/204 (44%), Gaps = 39/204 (19%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   +T E  P G  GP G  G  GA G  G  G+ GE   PGV GP GP G  G  G+
Sbjct: 697 QGPVGATGERGPIGPAGPTGFPGLPGAPGSPGPAGKDGE---PGVSGPAGPPGATGQRGE 753

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           RG  G+ G PG  G+ G++G+ G +G  G PG  G  G  G PG  G  G+PG  GM G+
Sbjct: 754 RGFSGERGSPGLPGVAGEKGEAGAQGLDGPPGAEGPRGSKGHPGPMGTMGLPGLRGMSGL 813

Query: 220 PGKDG------------------------------------LPGKDGIPGTNGTNGEKGM 243
           PG+ G                                      G+ G PG  G +G  G 
Sbjct: 814 PGEKGERGSSGPQGPEGPAGRQGEQGPQGPIGPAGPPGEPAERGEPGTPGMPGESGAPGS 873

Query: 244 TGPRGNRGKSGINGVPGTPAICAY 267
           TG RG+ G  G NG+PG P +   
Sbjct: 874 TGERGHPGPQGNNGLPGPPGLTGM 897



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 12/150 (8%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPGL G  G KG+   +G  G KG++G +G+PG+ G PG +G+PG  G +G  G+ G+  
Sbjct: 891  PPGLTGMPGLKGD---RGYAGPKGQQGAQGSPGISGEPGQRGLPGQPGAKGAHGEQGH-- 945

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
                   +G+ G  G  G PG +G  G  G PG  G  G+PG  G  G  G+ G PG  G
Sbjct: 946  -------KGEIGRAGLPGRPGDMGPQGPQGSPGPTGAPGLPGAKGSTGDTGRSGPPGPQG 998

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            + G  G  G KG  G  G  G  G  G+PG
Sbjct: 999  LIGPQGPEGPKGERGAEGETGPQGQQGIPG 1028



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP G  G  G +G +G  G  G  G PG  G PGP G  G+ G  GP       GP
Sbjct: 691 PGSQGPQGPVGATGERGPIGPAGPTGFPGLPGAPGSPGPAGKDGEPGVSGPA------GP 744

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GL 225
            G  G  G+RG  G+ G PG  G+ G  G  G  GLDG PG  G  G  G        GL
Sbjct: 745 PGATGQRGERGFSGERGSPGLPGVAGEKGEAGAQGLDGPPGAEGPRGSKGHPGPMGTMGL 804

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PG  G+ G  G  GE+G +GP+G  G +G  G
Sbjct: 805 PGLRGMSGLPGEKGERGSSGPQGPEGPAGRQG 836



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 82/153 (53%), Gaps = 15/153 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  G  G++G +G KG  G++G RGE    G  G VGPPG  G  G  G++G +G  G 
Sbjct: 421 PGSPGLKGEQGAVGPKGSQGMQGPRGEPGRNGQSGEVGPPGLAGRDGTPGEKGVQGQTGA 480

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            GPQG PG      P+G  G  G  GL G  G+PG+PG  G  G  G+ G   + G PG 
Sbjct: 481 AGPQGFPG------PRGTPGVAGDPGLPGTKGMPGQPGDRGPKGEIGLRG---EIGAPGP 531

Query: 229 DGIPGT---NGTNGEKGMTGPRGNRGKSGINGV 258
            G+PG     G  G++G+ GP GN G  G  G+
Sbjct: 532 RGMPGGIGPEGKRGKRGLRGPPGNLGPQGDRGL 564



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/106 (48%), Positives = 64/106 (60%), Gaps = 9/106 (8%)

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G+RGP+G    PG  G PG++G+ GP G +G PG+    G  G+PG  GL G  G +G D
Sbjct: 296 GERGPQG---LPGKDGSPGEDGEPGPAGAIGQPGQ---RGSPGIPGIQGLKGHRGFDGKD 349

Query: 218 GIPGKDGLPGKDG---IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G+ GLPG+ G   +PG  G NG  G  GPRG RG+ G  GVPG
Sbjct: 350 GAKGEQGLPGEKGPTGLPGPMGPNGPAGPVGPRGERGREGPAGVPG 395



 Score = 46.2 bits (108), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 3/93 (3%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            GE G +GE G  G  G +G  G  GPPG  GI G+ G+ G  G  G+ G  G+PG  G  
Sbjct: 1139 GERGPRGESGSPGIEGPQGPSGKQGPPGMDGIKGERGENGADGPKGHAGLPGLPGLIGTP 1198

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G +GD G PG IG  G+D   G+ G  G PGR+
Sbjct: 1199 GRQGDRGLPGAIGPPGKD---GDAGPRGPPGRD 1228


>gi|441623643|ref|XP_004088929.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(XXVII) chain
            [Nomascus leucogenys]
          Length = 1844

 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/167 (44%), Positives = 93/167 (55%), Gaps = 16/167 (9%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G EG +G +G  G 
Sbjct: 1338 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGA 1397

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
            PGR G+ G  GLPG     G+ GR G++GIPG DGLPG+DG  G  G    +G+ G  GP
Sbjct: 1398 PGRRGIQGLQGLPGP---RGVVGRQGLEGIPGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 1454

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
             G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 1455 AGKRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1494



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 90/175 (51%), Gaps = 27/175 (15%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYPGPQGI 174
           K   GAKG+MG+ G  G  G PG  G    PGP G PG++G+ GP+G     GYPG QG+
Sbjct: 719 KAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGL 778

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G+PG  G+ G+ G PG 
Sbjct: 779 PGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGL 838

Query: 235 NGTNGEK---------------------GMTGPRGNRGKSGINGVPGTPAICAYK 268
           +G  GE                      G  GP+G +G+ G+ GV G P     K
Sbjct: 839 DGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGEQGVPGVSGDPGFQGDK 893



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 87/176 (49%), Gaps = 18/176 (10%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP G+ G  G+KG  G KG++G+ GAPG  G  G QG+PG  
Sbjct: 1354 GVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGIQGLQGLPGPR 1413

Query: 158  GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G +G  G PGP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 1414 GVVGRQGLEGIPGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1473

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G  G+PG+    G PGK G  G+ G+PG  G  G KG  G  G  G  G+ G+
Sbjct: 1474 GFKGESGLPGQL---GPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGL 1526



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 84/163 (51%), Gaps = 24/163 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+ G+ G  G+ GV+G RG+ G  G  G PGP+G PG +G +G +G  G    QG  G  
Sbjct: 1342 GEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGK---QGKAGAP 1398

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---------------------GMD 217
            G+RG +G  G PG  G+ GR GL G PG DG+PGR+                     G  
Sbjct: 1399 GRRGIQGLQGLPGPRGVVGRQGLEGIPGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKR 1458

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG  GLPG  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1459 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLPG 1501



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 89/175 (50%), Gaps = 30/175 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--------------- 157
            G +GP G++G+ GA G  G++G +G  G  GVVG  G +GIPG +               
Sbjct: 1384 GAEGPKGKQGKAGAPGRRGIQGLQGLPGPRGVVGRQGLEGIPGPDGLPGRDGQAGQQGEQ 1443

Query: 158  ------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                        GKRG  G  G PG QG PG +G+ G  G +G PG+ G +GR GLP   
Sbjct: 1444 GDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLPGNQ 1503

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G
Sbjct: 1504 GEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVG 1558



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG +GPPG         KRG +G  G 
Sbjct: 1449 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGRTGL 1499

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 1500 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGP 1559

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1560 LGILGPSGLPGPKGDKGSRGDWG 1582



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 76/144 (52%), Gaps = 12/144 (8%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++G
Sbjct: 709 QKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQG 759

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 760 QPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 819

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G RG  G++G PG
Sbjct: 820 KMGMPGFPGVFGERGPPGLDGNPG 843



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 88/173 (50%), Gaps = 24/173 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 737 PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGL 796

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN----------- 214
           PG  G+PG +G+RG  G  G  G++G+ G  G+ GE   PGLDG PG             
Sbjct: 797 PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGL 856

Query: 215 -------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                  G  G PG  G+ G+ G+PG +G  G +G  G +G  G  G  G PG
Sbjct: 857 IGDLGVLGPIGYPGPKGMKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPG 909



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 93/231 (40%), Gaps = 73/231 (31%)

Query: 100  QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            QG      E   PGL+G   P+G  G  G +G+ G  GE GEKG  G++           
Sbjct: 1199 QGLIGQRGE---PGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGV 1255

Query: 146  ----GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG------------------------- 176
                GP G  G  G++G+ G KG  G  G QG PG                         
Sbjct: 1256 TGVRGPEGKSGKQGEKGRTGAKGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGE 1315

Query: 177  ---------------------DEGKRGPKGDMGYPGRIGLD------GRDGLPGEPGLDG 209
                                 D G RG  GD GYPG+ G+       G+ G PG PG  G
Sbjct: 1316 QGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRG 1375

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG  G  G  G  G  GK G PG  G  G +G+ GPRG  G+ G+ G+PG
Sbjct: 1376 RPGPKGSKGAEGPKGKQGKAGAPGRRGIQGLQGLPGPRGVVGRQGLEGIPG 1426



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 88/222 (39%), Gaps = 73/222 (32%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 1178 PGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGE 1237

Query: 169  P---------------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP----- 202
                                  GP+G  G +G++G  G  G PGR+G  G  GL      
Sbjct: 1238 KGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAPGRMGAQGEPGLAGYDGH 1297

Query: 203  --------------------------------------------GEPGLDGIPGRNGMDG 218
                                                        GEPG  G PG+ G+ G
Sbjct: 1298 KGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQG 1357

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            + GK G  G+ G PG  G  G KG  G  G +GK G  G PG
Sbjct: 1358 LRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPG 1399



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 82/177 (46%), Gaps = 42/177 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGV------------KGERGEKGAPGVVGPPGPQGIPGDEGK- 159
            G+ GPIG  G  G KGE GV            KG +G  G PG  G PGP G  GD+G  
Sbjct: 861  GVLGPIGYPGPKGMKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPGPLGKVGDKGSI 920

Query: 160  --------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------ 193
                                 GP+G  G PG +G+PG  G+ GP+GD G  G        
Sbjct: 921  GFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLE 980

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G  GR G PG PGLDG+    G  G PG+ G  G+ G  G  G  GE G+ G +G+R
Sbjct: 981  GQPGRKGFPGRPGLDGV---KGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKGDR 1034



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 83/175 (47%), Gaps = 33/175 (18%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPKGDMGYPGPQ 172
           GP G +G IG  G  G+ G  GE+G PGV G  G  G+PG     G+RGP G  G PG  
Sbjct: 786 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGEL 845

Query: 173 GIP---------GDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIP 220
           G+P         GD G  GP   +GYPG  G+ G  G+P   G+PG  G  G  G+ G P
Sbjct: 846 GLPGPPGVPGLIGDLGVLGP---IGYPGPKGMKGEQGVPGVSGDPGFQGDKGSQGLPGFP 902

Query: 221 GKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKSGINGVPG 260
           G  G PG  G  G  G+                G  G  GP G +GK G  G+PG
Sbjct: 903 GARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPG 957



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 97/214 (45%), Gaps = 45/214 (21%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            + M GF     E  PPGL G     GE+G  G  GV G  G+ G  G +G PGP+G+ G+
Sbjct: 821  MGMPGFPGVFGERGPPGLDG---NPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGE 877

Query: 157  EGKRGPKGDMGYPGPQ------GIPGDEGKRGPKGDMGYPGRI----------------- 193
            +G  G  GD G+ G +      G PG  GK GP G +G  G I                 
Sbjct: 878  QGVPGVSGDPGFQGDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGP 937

Query: 194  -GLDGRDGLPGEPGLDGIPGRNG------------------MDGIPGKDGLPGKDGIPGT 234
             G +G +G+ G+PG  G+PG  G                  ++G PG+ G PG+ G+ G 
Sbjct: 938  PGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGV 997

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G+ G  GP G +G  G  G+ G P I   K
Sbjct: 998  KGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEK 1031



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 96/255 (37%), Gaps = 99/255 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGK 159
            PG  G  G++G+ G +G  G KG  G +G PG VG PGP+G            +PG +G+
Sbjct: 749  PGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGE 808

Query: 160  RG------PKGDMGYPGPQGIPGDEGKRGPKG---------------------------D 186
            RG       +G MG PG    PG  G+RGP G                            
Sbjct: 809  RGLPGVPGKRGKMGMPG---FPGVFGERGPPGLDGNPGELGLPGPPGVPGLIGDLGVLGP 865

Query: 187  MGYPGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGK--------------- 228
            +GYPG  G+ G  G+PG   +PG  G  G  G+ G PG  G PG                
Sbjct: 866  IGYPGPKGMKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGP 925

Query: 229  ---------DGIPGTNGTNGEKG------MTGPRGN------------------RGKSGI 255
                      G PG NG  G KG      + GPRG                    G+ G 
Sbjct: 926  PGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGR 985

Query: 256  NGVPGTPAICAYKRE 270
             G PG P +   K E
Sbjct: 986  KGFPGRPGLDGVKGE 1000



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 75/140 (53%), Gaps = 12/140 (8%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDMGYPGP 171
            +G KG  GA GE G+ GE G KG  G      P G PG++      G+ G +GD G  GP
Sbjct: 1166 MGPKGPPGAVGEPGLPGEAGMKGDLG------PLGTPGEQGLIGQRGEPGLEGDSGPMGP 1219

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+ GD G  GP G+ G  G+ GL G DG PG PG+ G+ G  G  G  G+ G  G  G 
Sbjct: 1220 DGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGA 1279

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
            PG  G  GE G+ G  G++G
Sbjct: 1280 PGRMGAQGEPGLAGYDGHKG 1299



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 71/174 (40%), Gaps = 60/174 (34%)

Query: 144 VVGPPGPQG------------------------------------------IPGDEG--- 158
           ++GPPGP+G                                            GD G   
Sbjct: 658 LMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSP 717

Query: 159 ---KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPG 212
                G KGDMG PG  G PG  G+   KG  GYPG  G  G  G P   G PG  G PG
Sbjct: 718 GKAHDGAKGDMGLPGLSGNPGPPGR---KGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPG 774

Query: 213 RNGMDGI---PGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           R G+ G    PG  G  G  G+P   G  G++GE+G+ G  G RGK G+ G PG
Sbjct: 775 RQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPG 828



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 54/100 (54%), Gaps = 12/100 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G+ G  G +GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 1484 QLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQG 1543

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
             RGP G MG     GP GI G  G  GPKGD G  G  GL
Sbjct: 1544 PRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGL 1583



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 18/105 (17%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKG---------APGVVGPPGPQGIPGDEGKRG 161
            PPG  GP G KG+ GA+G  G +G+ G +G         APG+ G PG +G PG  G  G
Sbjct: 937  PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDG 996

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             KG+         PGD G+ GP G+ G+ G IGL G  G+ GE G
Sbjct: 997  VKGE---------PGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKG 1032



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 51/115 (44%), Gaps = 30/115 (26%)

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMD 217
            GPKG  G  G  G+PG+ G    KGD+G           G PGE GL    G PG  G  
Sbjct: 1167 GPKGPPGAVGEPGLPGEAGM---KGDLGP---------LGTPGEQGLIGQRGEPGLEGDS 1214

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTG---------------PRGNRGKSGING 257
            G  G DGL G  G PG +G +GEKG  G                RG  GKSG  G
Sbjct: 1215 GPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQG 1269


>gi|306827437|ref|ZP_07460723.1| collagen family protein 2 [Streptococcus pyogenes ATCC 10782]
 gi|304430382|gb|EFM33405.1| collagen family protein 2 [Streptococcus pyogenes ATCC 10782]
          Length = 382

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 99/191 (51%), Gaps = 27/191 (14%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGI 153
           +  +G         P G  GP G  G  G  GE G KG+RGEKG PG  GP GP    G 
Sbjct: 96  IGPRGPRGEAGAQGPAGPAGPQGLMGPAGKDGEAGTKGDRGEKGEPGPQGPVGPAGKDGT 155

Query: 154 PGDEGKRGPKGDMGYPGPQGI---PGDEGKRG---------PKGDMGYPGRIGLDGRDGL 201
           PG  G +GP+G+ G PG +G    PG +G RG         P+GD G PG  G DG  G 
Sbjct: 156 PGATGPQGPRGEKGDPGEKGADGAPGAKGDRGETGPAGPVGPRGDKGEPGPAGKDGDRGP 215

Query: 202 PGEPGLDGIPGRNGM---------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G DG  G++G+         DG+PGKDG  G+DG+PG +G +G+ G     G  GK
Sbjct: 216 VGPAGKDGQDGKDGLPGKDGKDGKDGLPGKDGKDGQDGLPGKDGKDGQNGKD---GLPGK 272

Query: 253 SGINGVPGTPA 263
            G +G PG PA
Sbjct: 273 DGKDGQPGKPA 283



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 70/139 (50%), Gaps = 12/139 (8%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G KG++G +G  G +GP GP+G  G +G  GP G  G  GP G  G+ G +G +
Sbjct: 76  GKDGRDGDKGDQGPRGETGPIGPRGPRGEAGAQGPAGPAGPQGLMGPAGKDGEAGTKGDR 135

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEK 241
           G+ G PG  G  G        G DG PG  G  G  G+ G PG+ G    +G     G++
Sbjct: 136 GEKGEPGPQGPVG------PAGKDGTPGATGPQGPRGEKGDPGEKGA---DGAPGAKGDR 186

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G TGP G  G  G  G PG
Sbjct: 187 GETGPAGPVGPRGDKGEPG 205



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 57/120 (47%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +GK G  GD G  GP+G  G  G RGP+G+ G  G  G  G  GL G  G DG  G  G 
Sbjct: 75  DGKDGRDGDKGDQGPRGETGPIGPRGPRGEAGAQGPAGPAGPQGLMGPAGKDGEAGTKGD 134

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G  G+ G  G  G  G +GT G  G  GPRG +G  G  G  G P     + E+    P
Sbjct: 135 RGEKGEPGPQGPVGPAGKDGTPGATGPQGPRGEKGDPGEKGADGAPGAKGDRGETGPAGP 194


>gi|340722548|ref|XP_003399666.1| PREDICTED: collagen alpha-2(IV) chain-like [Bombus terrestris]
          Length = 1839

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 103/228 (45%), Gaps = 54/228 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +GPIG  G  G KG+ G+ G+ G+ G PG+ G PGP+G+PG  G  GPKG +G PGP 
Sbjct: 1143 GERGPIGPPGYSGPKGKRGLDGDPGQMGLPGMPGDPGPRGLPGLMGAPGPKGMVGEPGPP 1202

Query: 173  ----------GIPGDEGKRGPKGDMGYPGRIGLDGR------------DGLPGEPGLDGI 210
                      G PG EG +G KG  G  G IGL GR            DG PG PG  G+
Sbjct: 1203 SYGESERGDFGTPGLEGLQGEKGIRGEQGFIGLHGRKGMKGDIGFPGPDGFPGVPGFPGL 1262

Query: 211  PGRNG---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR-------- 247
            PG  G                DG+PG DGLPG  GIPG  G  GE G  GP+        
Sbjct: 1263 PGDRGPQGFPGLPGELAEPSEDGLPGLDGLPGTPGIPGQKGAPGEYGYNGPKGIMGDVGF 1322

Query: 248  ---------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
                     G+RG  G  G PG P +   +       P  E     +P
Sbjct: 1323 STRGPKGLPGDRGPEGFRGFPGAPGLVGLEGVPGLQGPKGEPGDRGLP 1370



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 94/183 (51%), Gaps = 25/183 (13%)

Query: 112  PGLQGPIGQKGEIGA-----------------KGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            PGLQGP G+ G+ G                   G  G+KGE G+ GAPG  G  G +G  
Sbjct: 1355 PGLQGPKGEPGDRGLPIFASKGRQGEPGLPGFNGRKGIKGEIGDTGAPGREGLFGRKGQR 1414

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEG--------KRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            GD+G  G  G MG PGP+G  GD G        ++G  GD+G PG  G  G  G+ GE G
Sbjct: 1415 GDDGDEGLSGAMGLPGPKGPKGDNGINPFSPFPRKGLPGDVGLPGLPGFPGLQGMIGEQG 1474

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             DGIPGR G  G+ G  GLPG +G+ G+ G  G +G  G +G  G  GI G P  PA  A
Sbjct: 1475 EDGIPGRKGEPGMEGLPGLPGPEGVSGSPGYPGPRGAIGRQGPPGAPGIRGSPAPPAPGA 1534

Query: 267  YKR 269
              R
Sbjct: 1535 RNR 1537



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 88/189 (46%), Gaps = 37/189 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------------- 152
           PGL G  G KG  G +G MG +G  G+ G PG+ GP GP+G                   
Sbjct: 580 PGLSGLRGFKGVQGKRGIMGPRGLEGDSGRPGIAGPQGPKGEMGKLTWPDKLTRMPGDIG 639

Query: 153 ---IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------ 203
               PG EG RGP+G  G  G  GI G +G++G  G  G+PGR G  G DG+PG      
Sbjct: 640 DKGFPGVEGPRGPRGQPGSRGDSGIQGPKGEKGDFGPPGFPGRDGFAGLDGIPGVPGDNA 699

Query: 204 ---------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                    EPG  GIPG  G  G  G  G PG+   P      GEKG  G RG+ G+ G
Sbjct: 700 SIPKEFLRGEPGFPGIPGTKGPMGDKGGKGEPGESYPPPVINLKGEKGYKGGRGDIGEDG 759

Query: 255 INGVPGTPA 263
             G+ G P 
Sbjct: 760 AKGLEGWPG 768



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 93/202 (46%), Gaps = 31/202 (15%)

Query: 98   AMQGFCNSTKEYCPPGLQGP------IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
             + G      +  P GL+GP       G  G  G  G  GVKGERG  G PG  GP G +
Sbjct: 1101 GLPGPKGEVGDMGPDGLKGPRGTWGLKGTPGAYGIHGLPGVKGERGPIGPPGYSGPKGKR 1160

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD----GRDGLPGEPGL 207
            G+ GD G+ G  G  G PGP+G+PG  G  GPKG +G PG         G  G PG  GL
Sbjct: 1161 GLDGDPGQMGLPGMPGDPGPRGLPGLMGAPGPKGMVGEPGPPSYGESERGDFGTPGLEGL 1220

Query: 208  D------------GIPGRNGMD---GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG---- 248
                         G+ GR GM    G PG DG PG  G PG  G  G +G  G  G    
Sbjct: 1221 QGEKGIRGEQGFIGLHGRKGMKGDIGFPGPDGFPGVPGFPGLPGDRGPQGFPGLPGELAE 1280

Query: 249  --NRGKSGINGVPGTPAICAYK 268
                G  G++G+PGTP I   K
Sbjct: 1281 PSEDGLPGLDGLPGTPGIPGQK 1302



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 101/199 (50%), Gaps = 30/199 (15%)

Query: 92  SRIPLVAMQGFCNSTKEYCPP--------GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG 143
           ++ P+    G     + Y PP        G +G  G  GE GAKG  G  G+ G  G PG
Sbjct: 718 TKGPMGDKGGKGEPGESYPPPVINLKGEKGYKGGRGDIGEDGAKGLEGWPGDEGFPGLPG 777

Query: 144 VVGPPG-----P---QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR--- 192
           + G PG     P   +G PG  G +GP+G  G PG QG  G  G+ G KGD G PG    
Sbjct: 778 ISGSPGISRQGPIGLKGYPGMPGDQGPRGTSGTPGSQGPMGFTGRLGNKGDRGEPGSNQT 837

Query: 193 ------IGLDGRDGLPGEPGLDGIPGRNGMDGIPG---KDGLPGKDGIPGTNGTNGEKGM 243
                 +G  G+ G  G+PG  G+ GR G+DG+ G     G PG++G+PG  G  G++G 
Sbjct: 838 YGDYGLMGWFGKKGDVGDPGPRGLQGRPGLDGVKGTKGSKGAPGQEGLPGLQGAKGQRGY 897

Query: 244 T--GPRGNRGKSGINGVPG 260
           +  GPRG  G +G  G+PG
Sbjct: 898 STQGPRGFPGMAGQPGMPG 916



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 91/186 (48%), Gaps = 29/186 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------- 162
            G+ G +G  G  G  GE    G +GE G PG +G  GP G PG +G+ GP          
Sbjct: 1024 GISGDVGPDGLDGLPGESAFSGPQGEVGEPGFMGEVGPPGFPGMDGRHGPPGEPGIGRNG 1083

Query: 163  -------KGDMGY------PGPQGIPGD---EGKRGPKGDMGY---PGRIGLDGRDGLPG 203
                   +GD G+      PGP+G  GD   +G +GP+G  G    PG  G+ G  G+ G
Sbjct: 1084 SPGLKGIEGDTGFDGFNGLPGPKGEVGDMGPDGLKGPRGTWGLKGTPGAYGIHGLPGVKG 1143

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            E G  G PG +G  G  G DG PG+ G+PG  G  G +G+ G  G  G  G+ G PG P+
Sbjct: 1144 ERGPIGPPGYSGPKGKRGLDGDPGQMGLPGMPGDPGPRGLPGLMGAPGPKGMVGEPGPPS 1203

Query: 264  ICAYKR 269
                +R
Sbjct: 1204 YGESER 1209



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 99/218 (45%), Gaps = 51/218 (23%)

Query: 86  VWLNAYSRIPL-VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
            W +  +R+P  +  +GF         PG++GP G +G+ G++G+ G++G +GEKG  G 
Sbjct: 626 TWPDKLTRMPGDIGDKGF---------PGVEGPRGPRGQPGSRGDSGIQGPKGEKGDFGP 676

Query: 145 VGPPGPQGIPGDEGKRGPKGD---------MGYPGPQGIPGDEGKRGPKGDMGYPGR--- 192
            G PG  G  G +G  G  GD          G PG  GIPG +G  G KG  G PG    
Sbjct: 677 PGFPGRDGFAGLDGIPGVPGDNASIPKEFLRGEPGFPGIPGTKGPMGDKGGKGEPGESYP 736

Query: 193 ------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD----------- 223
                             IG DG  GL G PG +G PG  G+ G PG             
Sbjct: 737 PPVINLKGEKGYKGGRGDIGEDGAKGLEGWPGDEGFPGLPGISGSPGISRQGPIGLKGYP 796

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G+PG  G  GT+GT G +G  G  G  G  G  G PG+
Sbjct: 797 GMPGDQGPRGTSGTPGSQGPMGFTGRLGNKGDRGEPGS 834



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 90/210 (42%), Gaps = 60/210 (28%)

Query: 119 GQKGEIGAKGEMGVKGER---------GEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMG 167
           G+ G+ G  GEMG++G           G KG PG+   GPPG  G PG            
Sbjct: 437 GEPGQDGLTGEMGLQGPPGAPGIPGLDGPKGFPGISIHGPPGLDGKPG------------ 484

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPG---RIG-------------LDGRDGLPGEPGLDGI- 210
           YPG  G+PGD G  GP+G  G+PG   RIG             L G DG PG PG  G+ 
Sbjct: 485 YPGIPGLPGDRGDHGPQGPKGFPGKGSRIGGPPGERGLPGLPGLPGPDGFPGAPGFKGVK 544

Query: 211 --------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                         PGR G  G  G DG PG  G PG +G  G KG+ G RG  G  G+ 
Sbjct: 545 GLKGDDCGVCTPGLPGRKGEPGDSGLDGYPGTPGYPGLSGLRGFKGVQGKRGIMGPRGLE 604

Query: 257 GVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           G  G P I   +       P  E  +L  P
Sbjct: 605 GDSGRPGIAGPQG------PKGEMGKLTWP 628



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 89/181 (49%), Gaps = 28/181 (15%)

Query: 92  SRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------- 141
           SR   + ++G+     +  P G  G  G +G +G  G +G KG+RGE G+          
Sbjct: 785 SRQGPIGLKGYPGMPGDQGPRGTSGTPGSQGPMGFTGRLGNKGDRGEPGSNQTYGDYGLM 844

Query: 142 -----PGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
                 G VG PGP+G+   PG +G +G KG  G PG +G+PG +G    KG  GY    
Sbjct: 845 GWFGKKGDVGDPGPRGLQGRPGLDGVKGTKGSKGAPGQEGLPGLQGA---KGQRGYS--- 898

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
              G  G PG  G  G+PGR G  GI G  G PG DG+    G  GE G  G RG+ G +
Sbjct: 899 -TQGPRGFPGMAGQPGMPGRMGEVGITGPYGTPGFDGM---KGLKGEIGFIGRRGDDGDA 954

Query: 254 G 254
           G
Sbjct: 955 G 955



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 91/176 (51%), Gaps = 22/176 (12%)

Query: 100  QGFCNSTKEYCPP---GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG-----PPGPQ 151
            QGF     E   P   GL G  G  G  G  G+ G  GE G  G  G++G       GP+
Sbjct: 1269 QGFPGLPGELAEPSEDGLPGLDGLPGTPGIPGQKGAPGEYGYNGPKGIMGDVGFSTRGPK 1328

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL-----DGRDGLPGEPG 206
            G+PGD   RGP+G  G+PG  G+ G EG  G +G  G PG  GL      GR G PG PG
Sbjct: 1329 GLPGD---RGPEGFRGFPGAPGLVGLEGVPGLQGPKGEPGDRGLPIFASKGRQGEPGLPG 1385

Query: 207  LD---GIPGRNGMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGNRGKSGIN 256
             +   GI G  G  G PG++GL G+ G  G +   G +G  G+ GP+G +G +GIN
Sbjct: 1386 FNGRKGIKGEIGDTGAPGREGLFGRKGQRGDDGDEGLSGAMGLPGPKGPKGDNGIN 1441



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 92/196 (46%), Gaps = 17/196 (8%)

Query: 79   STHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG---EMGVKGE 135
            S  + P   +     +  V   GF      + PPG  G IG+ G  G KG   + G  G 
Sbjct: 1041 SAFSGPQGEVGEPGFMGEVGPPGFPGMDGRHGPPGEPG-IGRNGSPGLKGIEGDTGFDGF 1099

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
             G  G  G VG  GP G+ G  G  G KG  G  G  G+PG +G+RGP G  GY G  G 
Sbjct: 1100 NGLPGPKGEVGDMGPDGLKGPRGTWGLKGTPGAYGIHGLPGVKGERGPIGPPGYSGPKGK 1159

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN-------------GTNGEKG 242
             G DG PG+ GL G+PG  G  G+PG  G PG  G+ G               GT G +G
Sbjct: 1160 RGLDGDPGQMGLPGMPGDPGPRGLPGLMGAPGPKGMVGEPGPPSYGESERGDFGTPGLEG 1219

Query: 243  MTGPRGNRGKSGINGV 258
            + G +G RG+ G  G+
Sbjct: 1220 LQGEKGIRGEQGFIGL 1235



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 60/108 (55%), Gaps = 9/108 (8%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------I 174
           KG  G KG  G KG  G KG PG+ GP    G PG  G +G KG+ G  GP+G       
Sbjct: 269 KGSRGEKGMRGDKGGYGRKGEPGIKGP---HGRPGFAGTKGMKGEQGNDGPRGKQGAIGP 325

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           PG  G++G KG  GY G+ G DG DG  GEPG  G PG+ G  G PG+
Sbjct: 326 PGPSGEKGEKGAPGYAGQPGPDGLDGELGEPGNQGPPGKQGAAGEPGQ 373



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 88/180 (48%), Gaps = 40/180 (22%)

Query: 112  PGLQGPIGQKGEIGAKGEM---------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PGL G  G +G  G  GE+         G+ G  G  G PG       +G PG+ G  GP
Sbjct: 1260 PGLPGDRGPQGFPGLPGELAEPSEDGLPGLDGLPGTPGIPGQ------KGAPGEYGYNGP 1313

Query: 163  KGDMG-----YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIP 211
            KG MG       GP+G+PGD   RGP+G  G+PG  GL G +G+P      GEPG  G+P
Sbjct: 1314 KGIMGDVGFSTRGPKGLPGD---RGPEGFRGFPGAPGLVGLEGVPGLQGPKGEPGDRGLP 1370

Query: 212  -----GRNGMDGIPGKDGLP------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                 GR G  G+PG +G        G  G PG  G  G KG  G  G+ G SG  G+PG
Sbjct: 1371 IFASKGRQGEPGLPGFNGRKGIKGEIGDTGAPGREGLFGRKGQRGDDGDEGLSGAMGLPG 1430



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 83/173 (47%), Gaps = 24/173 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-----IPGDEGKRGPKGDM 166
           PG+ G  G +G  G  GEMG  GERG+ G  G +G PG QG     + G +G  G +GD 
Sbjct: 188 PGIDGFEGFQGSYGIPGEMGYPGERGDMGYRGPMGLPGMQGEVGETVYGAKGTVGEQGDR 247

Query: 167 GYPGP----------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           G PGP                +G  G++G RG KG  G  G  G+ G  G PG  G  G+
Sbjct: 248 GEPGPPSKDEYKKTDTMYYPVKGSRGEKGMRGDKGGYGRKGEPGIKGPHGRPGFAGTKGM 307

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G DG  GK G     G PG +G  GEKG  G  G  G  G++G  G P 
Sbjct: 308 KGEQGNDGPRGKQGA---IGPPGPSGEKGEKGAPGYAGQPGPDGLDGELGEPG 357



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 79/160 (49%), Gaps = 20/160 (12%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           I ++G IG KG  G+ G++G +G  G  G  GP G     G+ G KGD G PG     GD
Sbjct: 784 ISRQGPIGLKGYPGMPGDQGPRGTSGTPGSQGPMGF---TGRLGNKGDRGEPGSNQTYGD 840

Query: 178 EGKRG---PKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGRNGMDG--IP 220
            G  G    KGD+G PG  GL GR GL            PG+ GL G+ G  G  G    
Sbjct: 841 YGLMGWFGKKGDVGDPGPRGLQGRPGLDGVKGTKGSKGAPGQEGLPGLQGAKGQRGYSTQ 900

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G PG  G PG  G  GE G+TGP G  G  G+ G+ G
Sbjct: 901 GPRGFPGMAGQPGMPGRMGEVGITGPYGTPGFDGMKGLKG 940



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 87/180 (48%), Gaps = 33/180 (18%)

Query: 129 EMGVKGE---------------RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           E G  GE               RG  GAPGV G PGP+G+ G +G  G  G  G  G  G
Sbjct: 89  EKGAAGEYGGTGEKGYRGDEGIRGFPGAPGVPGNPGPEGVMGPDGLDGCNGTDGRAGAPG 148

Query: 174 IPGDEGKR---GPKGD---MGYPGRIGLD--GRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +PG  G+R   GP+GD   +G PG  G++  G  G+ G PG+DG  G  G  GIPG+ G 
Sbjct: 149 LPGMHGERGQPGPEGDPGIVGEPGDGGINSVGVKGVRGNPGIDGFEGFQGSYGIPGEMGY 208

Query: 226 PGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           PG+          G+PG  G  GE  + G +G  G+ G  G PG P+   YK+      P
Sbjct: 209 PGERGDMGYRGPMGLPGMQGEVGET-VYGAKGTVGEQGDRGEPGPPSKDEYKKTDTMYYP 267



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 78/150 (52%), Gaps = 28/150 (18%)

Query: 124  IGAKGEMG---------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            IGAKG+ G         + G  G KG  G VGP G  G+PG+    GP+G++G PG    
Sbjct: 999  IGAKGQPGDTGPEGIIGIIGLPGPKGISGDVGPDGLDGLPGESAFSGPQGEVGEPGFM-- 1056

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGI 231
                      G++G PG  G+DGR G PGEPG+    GRN   G+ GI G  G  G +G+
Sbjct: 1057 ----------GEVGPPGFPGMDGRHGPPGEPGI----GRNGSPGLKGIEGDTGFDGFNGL 1102

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG  G  G+ G  G +G RG  G+ G PG 
Sbjct: 1103 PGPKGEVGDMGPDGLKGPRGTWGLKGTPGA 1132



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 91/202 (45%), Gaps = 32/202 (15%)

Query: 103 CNST-KEYCPPGLQGPIGQKGEIGAKGE--------------MGVKGERGEKGAPGVVGP 147
           CN T      PGL G  G++G+ G +G+              +GVKG RG  G  G  G 
Sbjct: 137 CNGTDGRAGAPGLPGMHGERGQPGPEGDPGIVGEPGDGGINSVGVKGVRGNPGIDGFEGF 196

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            G  GIPG+ G  G +GDMGY GP G+PG +G+ G +   G  G +G  G  G PG P  
Sbjct: 197 QGSYGIPGEMGYPGERGDMGYRGPMGLPGMQGEVG-ETVYGAKGTVGEQGDRGEPGPPSK 255

Query: 208 D-------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRG 251
           D             G  G  GM G  G  G  G+ GI G +G     G KGM G +GN G
Sbjct: 256 DEYKKTDTMYYPVKGSRGEKGMRGDKGGYGRKGEPGIKGPHGRPGFAGTKGMKGEQGNDG 315

Query: 252 KSGINGVPGTPAICAYKRESCS 273
             G  G  G P     K E  +
Sbjct: 316 PRGKQGAIGPPGPSGEKGEKGA 337



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 80/170 (47%), Gaps = 34/170 (20%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIP------------------------GDEGKRGPKGDMG 167
            KG +G  G PG+ GP GP+G+P                        G++G RG +G  G
Sbjct: 53  CKGIKGTPGFPGITGPQGPEGLPGDIGPDGPPGPKGEKGAAGEYGGTGEKGYRGDEGIRG 112

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           +PG  G+PG+    GP+G MG  G  G +G DG  G PGL   PG +G  G PG +G PG
Sbjct: 113 FPGAPGVPGNP---GPEGVMGPDGLDGCNGTDGRAGAPGL---PGMHGERGQPGPEGDPG 166

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT---PAICAYKRESCSL 274
             G PG  G N   G+ G RGN G  G  G  G+   P    Y  E   +
Sbjct: 167 IVGEPGDGGIN-SVGVKGVRGNPGIDGFEGFQGSYGIPGEMGYPGERGDM 215



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 12/95 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG++GP G+ G  G KG  G +G  G +G  G +GPPGP G   ++G++G  G  G PGP
Sbjct: 290 PGIKGPHGRPGFAGTKGMKGEQGNDGPRGKQGAIGPPGPSG---EKGEKGAPGYAGQPGP 346

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            G+          G++G PG  G  G+ G  GEPG
Sbjct: 347 DGL---------DGELGEPGNQGPPGKQGAAGEPG 372



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 89/187 (47%), Gaps = 27/187 (14%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE-----KGAPGVVGPPGPQG 152
            + GF      Y  PG  G  G++G++G +G MG+ G +GE      GA G VG  G +G
Sbjct: 189 GIDGFEGFQGSYGIPGEMGYPGERGDMGYRGPMGLPGMQGEVGETVYGAKGTVGEQGDRG 248

Query: 153 IPGDEGK-------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            PG   K             +G +G+ G  G +G  G +G+ G KG  G P   G  G  
Sbjct: 249 EPGPPSKDEYKKTDTMYYPVKGSRGEKGMRGDKGGYGRKGEPGIKGPHGRP---GFAGTK 305

Query: 200 GLPGEPGLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G+ GE G DG  G+ G  G P      G+ G PG  G PG +G +GE G  G +G  GK 
Sbjct: 306 GMKGEQGNDGPRGKQGAIGPPGPSGEKGEKGAPGYAGQPGPDGLDGELGEPGNQGPPGKQ 365

Query: 254 GINGVPG 260
           G  G PG
Sbjct: 366 GAAGEPG 372



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 91/211 (43%), Gaps = 64/211 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QG  G +G+ GA G  G  GE+GEKGAPG  G PGP G+ G+ G+ G +G  G  G  
Sbjct: 309 GEQGNDGPRGKQGAIGPPGPSGEKGEKGAPGYAGQPGPDGLDGELGEPGNQGPPGKQGAA 368

Query: 173 GIPGD---------EGKRGPKGDM------------GYPGRI------------------ 193
           G PG          +G  G +GD+            G PG++                  
Sbjct: 369 GEPGQYIPELDEIIQGNIGIQGDLGPPGNPGEPGIPGLPGKVGYIGPPGPPGPLGPPGSA 428

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMD-----------------------GIPGKDGLPGKDG 230
           GL G   + GEPG DG+ G  G+                        G PG DG PG  G
Sbjct: 429 GLKGSS-IKGEPGQDGLTGEMGLQGPPGAPGIPGLDGPKGFPGISIHGPPGLDGKPGYPG 487

Query: 231 IPGTNGTNGEKGMTGPRGNRGK-SGINGVPG 260
           IPG  G  G+ G  GP+G  GK S I G PG
Sbjct: 488 IPGLPGDRGDHGPQGPKGFPGKGSRIGGPPG 518



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 80/182 (43%), Gaps = 31/182 (17%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           C PGL G   +KGE G  G  G  G  G  G  G+ G  G QG  G  G RG +GD G P
Sbjct: 554 CTPGLPG---RKGEPGDSGLDGYPGTPGYPGLSGLRGFKGVQGKRGIMGPRGLEGDSGRP 610

Query: 170 G---PQGIPGDEGK----------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           G   PQG  G+ GK           G  GD G+PG  G  G  G PG  G  GI G  G 
Sbjct: 611 GIAGPQGPKGEMGKLTWPDKLTRMPGDIGDKGFPGVEGPRGPRGQPGSRGDSGIQGPKGE 670

Query: 217 D------GIPGKDGLPGKDGIPGTNGTN---------GEKGMTGPRGNRGKSGINGVPGT 261
                  G PG+DG  G DGIPG  G N         GE G  G  G +G  G  G  G 
Sbjct: 671 KGDFGPPGFPGRDGFAGLDGIPGVPGDNASIPKEFLRGEPGFPGIPGTKGPMGDKGGKGE 730

Query: 262 PA 263
           P 
Sbjct: 731 PG 732



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 78/164 (47%), Gaps = 33/164 (20%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----VVGPPGPQ------------G 152
           + PPGL G  G  G  G  G+ G  G +G KG PG    + GPPG +            G
Sbjct: 474 HGPPGLDGKPGYPGIPGLPGDRGDHGPQGPKGFPGKGSRIGGPPGERGLPGLPGLPGPDG 533

Query: 153 IPGDEGKRGPKG----DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            PG  G +G KG    D G   P G+PG +G+         PG  GLDG  G PG PGL 
Sbjct: 534 FPGAPGFKGVKGLKGDDCGVCTP-GLPGRKGE---------PGDSGLDGYPGTPGYPGLS 583

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
           G+    G  G+ GK G+ G  G+ G +G  G  G  GP+G  GK
Sbjct: 584 GL---RGFKGVQGKRGIMGPRGLEGDSGRPGIAGPQGPKGEMGK 624



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 95/245 (38%), Gaps = 95/245 (38%)

Query: 99  MQGFCNSTKEYCP------------PGLQGPI-----------------------GQKGE 123
           +QG      +  P            PG  G I                       G+ G+
Sbjct: 382 IQGNIGIQGDLGPPGNPGEPGIPGLPGKVGYIGPPGPPGPLGPPGSAGLKGSSIKGEPGQ 441

Query: 124 IGAKGEMGVKGER---------GEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GEMG++G           G KG PG+   GPPG  G P            GYPG  
Sbjct: 442 DGLTGEMGLQGPPGAPGIPGLDGPKGFPGISIHGPPGLDGKP------------GYPGIP 489

Query: 173 GIPGDEGKRGPKGDMGYPG---RIG-------------LDGRDGLPGEPGLDGI------ 210
           G+PGD G  GP+G  G+PG   RIG             L G DG PG PG  G+      
Sbjct: 490 GLPGDRGDHGPQGPKGFPGKGSRIGGPPGERGLPGLPGLPGPDGFPGAPGFKGVKGLKGD 549

Query: 211 ---------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                          PG +G+DG PG  G PG  G+ G  G  G++G+ GPRG  G SG 
Sbjct: 550 DCGVCTPGLPGRKGEPGDSGLDGYPGTPGYPGLSGLRGFKGVQGKRGIMGPRGLEGDSGR 609

Query: 256 NGVPG 260
            G+ G
Sbjct: 610 PGIAG 614


>gi|76160814|gb|ABA39881.1| alpha 1 type XXIV collagen [Mus musculus]
 gi|187952151|gb|AAI39135.1| Collagen, type XXIV, alpha 1 [Mus musculus]
          Length = 1733

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 92/165 (55%), Gaps = 9/165 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYP 169
            G++GP G +G+ G +GE G KG+ G  G+ G  G PGP+   G PG+EG +G  G  G P
Sbjct: 1027 GVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAP 1086

Query: 170  GPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G  G+PG++G +G        G +G PG++GL G +G+ G PG  G  G+ G  G  G  
Sbjct: 1087 GGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPM 1146

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G PG+ G NG KG  G RG  G  G+ G  G P I  Y+
Sbjct: 1147 GEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMGPEGEPGIPGYR 1191



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 88/165 (53%), Gaps = 15/165 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G++G  GE G +G  G  G PG +G  GP G  GD G +G  G  G  GP
Sbjct: 993  PGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGP 1052

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------------GI 219
             G  G  G+ GP+G+ G PG  GL G+DGL G PG  G+PG +G              G 
Sbjct: 1053 AGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGR 1112

Query: 220  PGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG+ GLPG +GI   PG  G  G+KG  G  G  G++G  G PG+
Sbjct: 1113 PGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPMGEAGSRGPPGS 1157



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/190 (41%), Positives = 98/190 (51%), Gaps = 20/190 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGD---M 166
            G QG  G KGE G +G+ G+ G  G+ G+PG   V G PG QG+PG  G  GP G+    
Sbjct: 955  GDQGGHGAKGEKGNQGKRGLPGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPR 1014

Query: 167  GYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLP-------GEPGLDGIPGRNGM 216
            G PG  G+PG+ G  GP   +GD G  G  G  G DG P       GEPG  G PG  G 
Sbjct: 1015 GLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKG-DGGPAGSAGATGEPGPRGEPGAPGE 1073

Query: 217  DGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
            +G+ GKDGL   PG  G+PG +G  GE G+ G  G  G+ G  G+PG   I     +   
Sbjct: 1074 EGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGR 1133

Query: 274  LLPNSETSQL 283
            L    +  Q+
Sbjct: 1134 LGKKGDKGQV 1143



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 82/155 (52%), Gaps = 3/155 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G  GE G +G+ G +G  G  G  G  G PGP+G+PG  G  G  G  G PG 
Sbjct: 975  PGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGT 1034

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            +G  G +G+ G KGD G  G  G  G     G PG PG +G+ G++G+ G PG  GLPG+
Sbjct: 1035 EGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGE 1094

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            DG  G  G  G  G  G  G  G  G  G+ GTP 
Sbjct: 1095 DGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPG 1129



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 88/175 (50%), Gaps = 12/175 (6%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGP---- 150
             +QG   +  +  P G  G  G+   +GE GA GE G++G+ G KGAPG  G PG     
Sbjct: 1039 GLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDK 1098

Query: 151  --QGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
               G+PG  G  G  G MG PGP+GI   PG  G+ G KGD G  G +G  G  G PG  
Sbjct: 1099 GEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPMGEAGSRGPPGSV 1158

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G +G  G  G  G  G  GL G +G PG  G  G +G  GP G  G  G  G PG
Sbjct: 1159 GENGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPG 1213



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 80/160 (50%), Gaps = 33/160 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            KG MGV G RG        G  GP G PGD+G +GPKG+ G  GPQG      KRG  G 
Sbjct: 1246 KGHMGVPGLRG------ATGQQGPPGEPGDQGGQGPKGERGSEGPQG------KRGVPGP 1293

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGM 243
             G PG   + G  G PG  GL G PG +GM G PGK GLPGK    G+PG+ G  G  G 
Sbjct: 1294 SGKPG---IPGVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGS 1350

Query: 244  TGPRGN---------------RGKSGINGVPGTPAICAYK 268
             GP+G                +G+ G+ G PG P    ++
Sbjct: 1351 PGPQGGKGASGPPGSPGAPGPKGEQGLPGQPGVPGQRGHR 1390



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 89/182 (48%), Gaps = 39/182 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QGP G+ G+ G +G  G +G  G +G  GV GP G  GIPG  G  GPKG  GYPG  
Sbjct: 1259 GQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGFPGPKGLQGYPGVD 1318

Query: 173  GI------PGDEGKRGPKGDMGYPGRIGL------------------------DGRDGLP 202
            G+      PG  GK+G  G  G PGR G+                         G  GLP
Sbjct: 1319 GMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGSPGPQGGKGASGPPGSPGAPGPKGEQGLP 1378

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT------GPRGNRGKSGIN 256
            G+P   G+PG+ G  G PG  GL G  G+ G  G +G++G+       GPRG  G +GI 
Sbjct: 1379 GQP---GVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGPEGDAGIV 1435

Query: 257  GV 258
            G+
Sbjct: 1436 GI 1437



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 94/204 (46%), Gaps = 54/204 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVK------------------------GERGEKGAPGVVGP 147
            PG +G +G+ G  G KGE+G +                        GE+GE+G+PG +GP
Sbjct: 843  PGRKGYMGEPGPEGLKGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPLGP 902

Query: 148  PGPQGI------------------PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGP 183
             G +G+                  PG  G R      GPKG  G  GP G+ GD+G  G 
Sbjct: 903  QGEKGVMGYPGPPGAPGPMGPLGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGA 962

Query: 184  KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGT 237
            KG+ G  G+ GL G  G  G PG  G+ G+ G  G+PG        G PG  G+PG  G 
Sbjct: 963  KGEKGNQGKRGLPGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGL 1022

Query: 238  NGEKGMTGPRGNRGKSGINGVPGT 261
             GE G+ GP G  G SG+ G PG 
Sbjct: 1023 PGEMGVEGPPGTEGDSGLQGEPGA 1046



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 95/203 (46%), Gaps = 36/203 (17%)

Query: 97   VAMQGFCNSTKEYCPPGL------QGPIGQKGEIGAKGEMGVKGERG------------- 137
            V  QG    T E  P GL       G IG+KGE G+ G +G +GE+G             
Sbjct: 861  VGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGP 920

Query: 138  -----------EKGAPGVVGPPG------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
                        +GAPG  GP G      P G+ GD+G  G KG+ G  G +G+PG  GK
Sbjct: 921  MGPLGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGLPGK 980

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
             G  G+ G  G+ G  G  G  G+ G  G PG  G+ GI G  G  G +G PGT G +G 
Sbjct: 981  AGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGL 1040

Query: 241  KGMTGPRGNRGKSGINGVPGTPA 263
            +G  G +G+ G +G  G  G P 
Sbjct: 1041 QGEPGAKGDGGPAGSAGATGEPG 1063



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 71/131 (54%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           +G  G+ G  G  G PG+ GP GP+G PG    +   G+ G PG  G+ G  G +G KG 
Sbjct: 531 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGAKGL 590

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G+PG  GL G  GLPG  G  G PG  G  G+ G +G PG  G+ G  G+ GE G  GP
Sbjct: 591 KGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGP 650

Query: 247 RGNRGKSGING 257
            G RG  G+ G
Sbjct: 651 EGERGTPGVRG 661



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 95/223 (42%), Gaps = 70/223 (31%)

Query: 111  PPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP----- 162
            P G+ G  GQ+G +G    KG++G  GE G +G PG VG  GP+G  G  G  GP     
Sbjct: 1121 PEGIVGTPGQRGRLGKKGDKGQVGPMGEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMG 1180

Query: 163  ----------KGDMGYPGPQGIPGDEGKRG-P---------------------------- 183
                      +G  G PGP G+PG +G++G P                            
Sbjct: 1181 PEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPPGEPGPMGEQGETGEH 1240

Query: 184  -----KGDMGYPGRIGLDGRDGLPGEP------------------GLDGIPGRNGMDGIP 220
                 KG MG PG  G  G+ G PGEP                  G  G+PG +G  GIP
Sbjct: 1241 GEEGYKGHMGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIP 1300

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G PG  G+ G  G +G  G  G  G  GK G+ GVPG+P 
Sbjct: 1301 GVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPG 1343



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 94/222 (42%), Gaps = 67/222 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGD---- 165
            G  G  G  GE G KGEMG+ G  G  G PG +G PGP+GI   PG  G+ G KGD    
Sbjct: 1084 GAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQV 1143

Query: 166  --MGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRDGLP------GEPGLDGIP 211
              MG  G +G PG  G+ GPKG  G  G +      G +G  G+P      G+PG  G+P
Sbjct: 1144 GPMGEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLP 1203

Query: 212  GRNGMDGIPGKD----------------------------------------------GL 225
            G  G  G PG+D                                              G 
Sbjct: 1204 GPKGEKGYPGEDSTVLGPPGPPGEPGPMGEQGETGEHGEEGYKGHMGVPGLRGATGQQGP 1263

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            PG+ G  G  G  GE+G  GP+G RG  G +G PG P +  +
Sbjct: 1264 PGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGF 1305



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 94/203 (46%), Gaps = 45/203 (22%)

Query: 97   VAMQGFCNSTKEYCPPGL------QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
            + + G   +T +  PPG       QGP G++G  G +G+ GV G  G+ G PGV G PGP
Sbjct: 1249 MGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGFPGP 1308

Query: 151  ---QGIPGDEGKRGPKGDMGYPGPQG---IPGDEGKRG---------------------- 182
               QG PG +G  G  G  G PG QG   +PG  G+ G                      
Sbjct: 1309 KGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGSPGPQGGKGASGPPGSPGA 1368

Query: 183  --PKGDMGYPGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
              PKG+ G PG+ G+ G+ G    PG+ GL G PG  G  G  G  GL G  G PG  G 
Sbjct: 1369 PGPKGEQGLPGQPGVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGP 1428

Query: 238  NGEKGMT------GPRGNRGKSG 254
             G+ G+       GP G RG +G
Sbjct: 1429 EGDAGIVGIVGPKGPIGQRGNTG 1451



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 80/149 (53%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G        GE+G+   PG++G  GP   PG +G +G KG  G PG 
Sbjct: 546 PGLPGPKGPKGDPGLSPGQAASGEKGD---PGLLGLVGP---PGLQGAKGLKGHPGLPGL 599

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G  G  G  G  G  GYPGR GL G +G PG  G+ G  G  G  G  G +G  G  G+
Sbjct: 600 RGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGPEGERGTPGV 659

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G +G  G  G+RG +G++G PG
Sbjct: 660 RGKKGPKGRQGFPGDFGDRGPAGLDGSPG 688



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 84/193 (43%), Gaps = 51/193 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
           GL GP G +G  G KG  G+ G RGE G PG+ G  G  G PG +G  GP+G+       
Sbjct: 577 GLVGPPGLQGAKGLKGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVR 636

Query: 166 -----------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG-------- 206
                      +G  G +G PG  GK+GPKG  G+PG  G  G  GL G PG        
Sbjct: 637 GFIGSPGEVGQLGPEGERGTPGVRGKKGPKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPP 696

Query: 207 -------------------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                                    L G  G +G+ G  G+ G+ G+ G PG  G  G  
Sbjct: 697 GFPGVTGSVGPAGPTGPPGAPGPMGLSGSRGPSGIKGDKGEQGVAGEPGEPGYPGDKGNI 756

Query: 242 GMTGPRGNRGKSG 254
           G  GP G RGKSG
Sbjct: 757 GSPGPPGIRGKSG 769



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 86/168 (51%), Gaps = 21/168 (12%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IG  GE+G +G+ G K   G +G PGP+G+ G+ G +G  G  G  GP G
Sbjct: 821 LKGTQGEEGPIGPFGELGSRGKPGRK---GYMGEPGPEGLKGEVGDQGDIGKTGETGPVG 877

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGE---------------PGLDGIPGRNG 215
           +PG+    G  G KG+ G PG +G  G  G+ G                PGL G  G  G
Sbjct: 878 LPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPLGLPGLVGARGAPG 937

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G+ G  G DG+ G  G +G KG  G +G RG  G+ G  G+P 
Sbjct: 938 SPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGLPGKAGSPG 985



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 15/117 (12%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------------PGRIGLDGRDGLPGEPG 206
           KRGP+G  G  G  G+PG  G +GPKGD G             PG +GL G  GL G  G
Sbjct: 530 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGAKG 589

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           L G P   G+ G+ G+ GLPG  G  G+ G  G +G+ GP GN G  G+ G  G+P 
Sbjct: 590 LKGHP---GLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPG 643



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 88/188 (46%), Gaps = 48/188 (25%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGI---------------- 153
           G +GP G KG+   KGE GV GE GE G PG    +G PGP GI                
Sbjct: 724 GSRGPSGIKGD---KGEQGVAGEPGEPGYPGDKGNIGSPGPPGIRGKSGPSGQPGDPGPQ 780

Query: 154 -----------------PGDEGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRI 193
                            PG  G  GPKG +G    PGP G+ G +G+ GP G  G  G  
Sbjct: 781 GPSGPPGPEGFPGDIGIPGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEGPIGPFGELGSR 840

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGMTGPR 247
           G  GR G  GEPG +G+ G  G  G  GK       GLPG+ GI G+ G  GE+G  GP 
Sbjct: 841 GKPGRKGYMGEPGPEGLKGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPL 900

Query: 248 GNRGKSGI 255
           G +G+ G+
Sbjct: 901 GPQGEKGV 908



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 97/249 (38%), Gaps = 75/249 (30%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGI 153
           +   G+        P G  G  G +G IG+ GE+G  G  GE+G PGV G  GP   QG 
Sbjct: 612 IGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGPEGERGTPGVRGKKGPKGRQGF 671

Query: 154 PGDEGKRGPKGDMGYPG---------------------------------------PQGI 174
           PGD G RGP G  G PG                                       P GI
Sbjct: 672 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGVTGSVGPAGPTGPPGAPGPMGLSGSRGPSGI 731

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------------------- 208
            GD+G++G  G+ G PG  G  G  G PG PG+                           
Sbjct: 732 KGDKGEQGVAGEPGEPGYPGDKGNIGSPGPPGIRGKSGPSGQPGDPGPQGPSGPPGPEGF 791

Query: 209 ----GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGT 261
               GIPG+NG +G  G  G  G  G PG  GT GE+G  GP    G+RGK G  G  G 
Sbjct: 792 PGDIGIPGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEGPIGPFGELGSRGKPGRKGYMGE 851

Query: 262 PAICAYKRE 270
           P     K E
Sbjct: 852 PGPEGLKGE 860



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 6/85 (7%)

Query: 121  KGEIGAKGEMGVKGERGEKGAP---GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            KGE G  G+ GV G+RG +G P   G+ G PG +G PG+ G +G  G  G+PGP+G  GD
Sbjct: 1372 KGEQGLPGQPGVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGPEGD 1431

Query: 178  E---GKRGPKGDMGYPGRIGLDGRD 199
                G  GPKG +G  G  G  GR+
Sbjct: 1432 AGIVGIVGPKGPIGQRGNTGPLGRE 1456



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 67/135 (49%), Gaps = 27/135 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G KG +G +G  G   +KG +GE+G      P GP G  G  GK G KG MG 
Sbjct: 798 PGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEG------PIGPFGELGSRGKPGRKGYMGE 851

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP+G+      +G  GD G  G+ G  G  GLPGE G+ G  G  G            +
Sbjct: 852 PGPEGL------KGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKG------------E 893

Query: 229 DGIPGTNGTNGEKGM 243
            G PG  G  GEKG+
Sbjct: 894 RGSPGPLGPQGEKGV 908



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            KGE+G  G PGV G  G +G PGD+G R      G PG +G PG+ G +G  G  G+PG 
Sbjct: 1372 KGEQGLPGQPGVPGQRGHRGTPGDQGLR------GAPGLKGQPGEHGDQGLAGFQGFPGP 1425

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
             G +G  G+ G  G  G  G+ G  G  G++
Sbjct: 1426 RGPEGDAGIVGIVGPKGPIGQRGNTGPLGRE 1456


>gi|354482625|ref|XP_003503498.1| PREDICTED: collagen alpha-1(XXVII) chain-like [Cricetulus griseus]
          Length = 1847

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 102/211 (48%), Gaps = 17/211 (8%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP GQ G  G+KGE G KG+ G+ GA G  G  G QG+PG  
Sbjct: 1357 GVQGLRGKPGQQGQPGHPGPRGQPGPKGSKGEEGPKGKPGKTGASGRRGTQGLQGLPGPR 1416

Query: 158  GKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G  G +G  G  GP G PG +G+   +G +GD G PG IG  GR    G PG+ G+PG  
Sbjct: 1417 GVVGRQGPEGMDGPDGTPGRDGRPGYQGQQGDDGTPGPIGPAGRR---GNPGVAGLPGAQ 1473

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            G  G  G+ GLPG+ G PG  GT G  G+    GN+G+ G  G PG      +   +   
Sbjct: 1474 GPPGFKGESGLPGQLGSPGKRGTEGGTGLP---GNQGEPGSKGQPGDSGEMGFPGVAGLF 1530

Query: 275  LPNSETSQLLI--------PPTIVGSEHIFS 297
             P      +          PP ++G E I  
Sbjct: 1531 GPKGPPGDIGFKGIQGPRGPPGLMGKEGIIG 1561



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 80/145 (55%), Gaps = 9/145 (6%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G+EG +G  G  G 
Sbjct: 1341 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGQPGPKGSKGEEGPKGKPGKTGA 1400

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---TGP 246
             GR G  G  GLPG     G+ GR G +G+ G DG PG+DG PG  G  G+ G     GP
Sbjct: 1401 SGRRGTQGLQGLPGP---RGVVGRQGPEGMDGPDGTPGRDGRPGYQGQQGDDGTPGPIGP 1457

Query: 247  RGNRGKSGINGVPGTPAICAYKRES 271
             G RG  G+ G+PG      +K ES
Sbjct: 1458 AGRRGNPGVAGLPGAQGPPGFKGES 1482



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 88/172 (51%), Gaps = 24/172 (13%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  GA GE G+ G+ G KG  G +GPPG QG+ G  G+ G +GD+G  GP G+ GD
Sbjct: 1133 MGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGPMGPDGLKGD 1192

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            +G  GP G+ G  G+ GL G DGLPG PG+ GI    G +G PGK G  G+ G  G  G 
Sbjct: 1193 KGDPGPDGERGEKGQEGLKGEDGLPGPPGITGI---RGPEGKPGKQGEKGQMGAKGAKGY 1249

Query: 238  NGE---------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G+                     +G  GP G  G+ G  G PG      +K
Sbjct: 1250 QGQLGEMGTPGDPGPPGTPGPKGSRGTLGPMGAPGRMGAQGEPGLAGYNGHK 1301



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 102/230 (44%), Gaps = 17/230 (7%)

Query: 43   DKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGF 102
            D+GD  +   P  P  E V     + +R +  +Q    H  P               +G 
Sbjct: 1340 DRGDRGEPGDPGYPGQEGV-----QGLRGKPGQQGQPGHPGPRGQPGPKGSKGEEGPKGK 1394

Query: 103  CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---- 158
               T      G QG  G  G  G  G  G +G  G  G PG  G PG QG  GD+G    
Sbjct: 1395 PGKTGASGRRGTQGLQGLPGPRGVVGRQGPEGMDGPDGTPGRDGRPGYQGQQGDDGTPGP 1454

Query: 159  -----KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGI 210
                 +RG  G  G PG QG PG +G+ G  G +G PG+ G +G  GLP   GEPG  G 
Sbjct: 1455 IGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGSPGKRGTEGGTGLPGNQGEPGSKGQ 1514

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G PG
Sbjct: 1515 PGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPG 1564



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 79/149 (53%), Gaps = 12/149 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGD---EGKRGPKGD 165
            PG QG  G  G  G  G  G +G  G  G PG  GPPG     G+PG     GKRG +G 
Sbjct: 1440 PGYQGQQGDDGTPGPIGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGSPGKRGTEGG 1499

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G        G  GL
Sbjct: 1500 TGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPR------GPPGL 1553

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             GK+GI G  G  G  G+ GP+G+RG  G
Sbjct: 1554 MGKEGIIGPPGMLGPSGLPGPKGDRGSRG 1582



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 88/170 (51%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  GA G  G +G+ G +G+PG  G PG QG PG  G  GPKG  GY   
Sbjct: 689 PGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGL 748

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMD----- 217
           PG  G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG  G+      
Sbjct: 749 PGLFGLPGSDGER---GLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 805

Query: 218 -------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                  G  G  G PG  G+ G  G  GE G+ G +G +G  G++G PG
Sbjct: 806 PGLIGDMGALGSIGYPGPKGMKGLMGGVGEPGLKGDKGEQGFPGVSGDPG 855



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/125 (49%), Positives = 68/125 (54%), Gaps = 12/125 (9%)

Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GAKG MG+ G          +G KG PG  G PG QG PG EG  G KG   YPG QG P
Sbjct: 675 GAKGNMGLPGLSGNPGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKG---YPGRQGFP 731

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G PG  G  G+ G PG +
Sbjct: 732 GPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLD 791

Query: 236 GTNGE 240
           G  GE
Sbjct: 792 GNPGE 796



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 92/186 (49%), Gaps = 36/186 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGDM 166
           G  GP G KG +G  GE G+KG++GE+G PGV G PG       QG+PG  G R      
Sbjct: 819 GYPGPKGMKGLMGGVGEPGLKGDKGEQGFPGVSGDPGFQGDKGSQGLPGVPGAR------ 872

Query: 167 GYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-- 215
           G PGP G  GD+G           G  GD+G PG  G +G  G PG  GL G PG+ G  
Sbjct: 873 GKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPE 932

Query: 216 -------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                        ++G PG+ G PG+ G+ G+ G  G+ G  GP G +G  G  G+ G P
Sbjct: 933 GDEGPMGPPGVPGVEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEP 992

Query: 263 AICAYK 268
            I   K
Sbjct: 993 GIVGEK 998



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 86/173 (49%), Gaps = 33/173 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEM------------GVKGERGE---------------KGAPGV 144
            PG QG  G++G  GA+G +            G+ GE G                KG PG 
Sbjct: 1082 PGQQGAAGERGHSGARGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGA 1141

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            VG PG   +PGD G +G  G +G PG QG+ G  G+ G +GD+G    +G DG  G  G+
Sbjct: 1142 VGEPG---LPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGP---MGPDGLKGDKGD 1195

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG DG  G  G +G+ G+DGLPG  GI G  G  G+ G  G +G  G  G  G
Sbjct: 1196 PGPDGERGEKGQEGLKGEDGLPGPPGITGIRGPEGKPGKQGEKGQMGAKGAKG 1248



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 73/144 (50%), Gaps = 12/144 (8%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G  G PG+ G PGP G          KG  G+PG  G PG++G
Sbjct: 661 QKGDPGLSPGQAHDGAKGNMGLPGLSGNPGPLGR---------KGHKGHPGAAGHPGEQG 711

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR G  G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 712 QPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 771

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G RG  G++G PG
Sbjct: 772 EMGRPGFPGDFGERGPPGLDGNPG 795



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 83/190 (43%), Gaps = 42/190 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKG-------- 164
           GP G +G IG  G  G+ G  GE+G PGV G  G     G PGD G+RGP G        
Sbjct: 738 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEI 797

Query: 165 -------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                        DMG  G  G PG +G +G  G +G PG  G  G  G P   G+PG  
Sbjct: 798 GLPGPPGVPGLIGDMGALGSIGYPGPKGMKGLMGGVGEPGLKGDKGEQGFPGVSGDPGFQ 857

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---------------GEKGMTGPRGNRGKS 253
           G  G  G+ G+PG  G PG  G  G  G+                G  G  GP G +GK 
Sbjct: 858 GDKGSQGLPGVPGARGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 917

Query: 254 GINGVPGTPA 263
           G  G+PG P 
Sbjct: 918 GARGLPGPPG 927



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 83/188 (44%), Gaps = 48/188 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGK 159
           PG  G  G++G+ G +G  G KG  G +G PG VG PGP+G            +PG +G+
Sbjct: 701 PGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGE 760

Query: 160 RG------PKGDMGYPGPQGIPGDEGKRGPK---------------------------GD 186
           RG       +G+MG PG    PGD G+RGP                            G 
Sbjct: 761 RGLPGVPGKRGEMGRPG---FPGDFGERGPPGLDGNPGEIGLPGPPGVPGLIGDMGALGS 817

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
           +GYPG  G+ G  G  GEPGL G  G  G  G+ G  G  G  G  G  G  G +G  GP
Sbjct: 818 IGYPGPKGMKGLMGGVGEPGLKGDKGEQGFPGVSGDPGFQGDKGSQGLPGVPGARGKPGP 877

Query: 247 RGNRGKSG 254
            G  G  G
Sbjct: 878 LGKAGDKG 885



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 95/239 (39%), Gaps = 73/239 (30%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+  +G      +  P G  G  G KG+ G  GE G KG+ G KG  G+ GPPG  GI G
Sbjct: 1168 LIGQRGEPGLEGDLGPMGPDGLKGDKGDPGPDGERGEKGQEGLKGEDGLPGPPGITGIRG 1227

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGK---------------------RGPKGDMGYPGRIG 194
             EGK G +G+ G  G +G  G +G+                     RG  G MG PGR+G
Sbjct: 1228 PEGKPGKQGEKGQMGAKGAKGYQGQLGEMGTPGDPGPPGTPGPKGSRGTLGPMGAPGRMG 1287

Query: 195  LDGRDGLP-------------------------------------------------GEP 205
              G  GL                                                  GEP
Sbjct: 1288 AQGEPGLAGYNGHKGITGPLGPPGPKGQKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEP 1347

Query: 206  GLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G PG+ G+ G+   PG+ G PG  G  G  G  G KG  GP+G  GK+G +G  GT
Sbjct: 1348 GDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGQPGPKGSKGEEGPKGKPGKTGASGRRGT 1406



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 96/235 (40%), Gaps = 85/235 (36%)

Query: 111  PPGLQGPIGQKGEIGAKGEM---------------GVKGERGEKGAP------GVVGPPG 149
            PPG QG IGQ+GE G +G++               G  GERGEKG        G+ GPPG
Sbjct: 1162 PPGEQGLIGQRGEPGLEGDLGPMGPDGLKGDKGDPGPDGERGEKGQEGLKGEDGLPGPPG 1221

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---------------------RGPKGDMG 188
              GI G EGK G +G+ G  G +G  G +G+                     RG  G MG
Sbjct: 1222 ITGIRGPEGKPGKQGEKGQMGAKGAKGYQGQLGEMGTPGDPGPPGTPGPKGSRGTLGPMG 1281

Query: 189  YPGRIGLDGRDGLPGEPGLDGI------------PGRNGMDGI----------------- 219
             PGR+G  G  GL G  G  GI             G  G DG                  
Sbjct: 1282 APGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGQKGEQGEDGKAEGPPGPPGDRGPVGDR 1341

Query: 220  -----PGKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPG 260
                 PG  G PG++G+ G  G  G+         +G  GP+G++G+ G  G PG
Sbjct: 1342 GDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGQPGPKGSKGEEGPKGKPG 1396



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 86/193 (44%), Gaps = 54/193 (27%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------- 144
             M+G      E   PGL+G  G++G  G  G+ G +G++G +G PGV             
Sbjct: 825  GMKGLMGGVGE---PGLKGDKGEQGFPGVSGDPGFQGDKGSQGLPGVPGARGKPGPLGKA 881

Query: 145  --------------------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
                                +GPPG           GP+G  G PG +G+PG  G+ GP+
Sbjct: 882  GDKGSLGFPGPPGPEGFPGDIGPPGDN---------GPEGMKGKPGARGLPGPPGQLGPE 932

Query: 185  GDMGYPGRI------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            GD G  G        G  GR G PG PGLD   G  G  G PG+ G  G+ G+ G  G  
Sbjct: 933  GDEGPMGPPGVPGVEGQPGRKGFPGRPGLD---GSKGEPGDPGRPGPVGEQGLMGFIGLV 989

Query: 239  GEKGMTGPRGNRG 251
            GE G+ G +G+RG
Sbjct: 990  GEPGIVGEKGDRG 1002



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 85/197 (43%), Gaps = 48/197 (24%)

Query: 132  VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
             KG RG +G     GP G QG  G +G+ GP+G  G PG QG  G+ G  G +G +G PG
Sbjct: 1048 AKGHRGPRGP---DGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGARGFLGIPG 1104

Query: 192  RIGLDGRDGLPGEPGLD------------------------GIPGRNGMD------GIPG 221
              G  G  GLPGEPG                          G+PG +GM       G PG
Sbjct: 1105 PSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPG 1164

Query: 222  KDGLPGKDGIP---------GTNGTNGEKGMTGPRGNRGKSGI------NGVPGTPAICA 266
            + GL G+ G P         G +G  G+KG  GP G RG+ G       +G+PG P I  
Sbjct: 1165 EQGLIGQRGEPGLEGDLGPMGPDGLKGDKGDPGPDGERGEKGQEGLKGEDGLPGPPGITG 1224

Query: 267  YKRESCSLLPNSETSQL 283
             +          E  Q+
Sbjct: 1225 IRGPEGKPGKQGEKGQM 1241



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 78/189 (41%), Gaps = 51/189 (26%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---------------GKRGPKGDMG 167
            +IG  G+ G +G +G+ GA G+ GPPG  G  GDE               G++G  G  G
Sbjct: 901  DIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGVEGQPGRKGFPGRPG 960

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------------PGRNG 215
              G +G PGD G+ GP G+ G  G IGL G  G+ GE G  G+             G  G
Sbjct: 961  LDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 1020

Query: 216  MDG------------------------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            M G                          G  G  G DG  G  G+ G KG  GPRG  G
Sbjct: 1021 MPGGIGDPGEPGSRGPPGPRGPPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1080

Query: 252  KSGINGVPG 260
            + G  G  G
Sbjct: 1081 QPGQQGAAG 1089



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 83/195 (42%), Gaps = 57/195 (29%)

Query: 111  PPGLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVGPPG 149
            PPG  GP G KG+ GA+G  G                     V+G+ G KG PG  G  G
Sbjct: 904  PPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGVEGQPGRKGFPGRPGLDG 963

Query: 150  PQGIPGDEGKRGPKGD---MGYPGPQGIPGDEGKRGPKGDM---------------GYPG 191
             +G PGD G+ GP G+   MG+ G  G PG  G++G +G M               G PG
Sbjct: 964  SKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGMPG 1023

Query: 192  RIG------------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             IG                  + G  G  G  G DG  G  G  G+ G+ G  G+ G PG
Sbjct: 1024 GIGDPGEPGSRGPPGPRGPPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPG 1083

Query: 234  TNGTNGEKGMTGPRG 248
              G  GE+G +G RG
Sbjct: 1084 QQGAAGERGHSGARG 1098



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 38/77 (49%)

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  G +GL G  G PG  G  G  G  G  G PG+ G PG +G PG  G  G +G  GP 
Sbjct: 675 GAKGNMGLPGLSGNPGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPV 734

Query: 248 GNRGKSGINGVPGTPAI 264
           G+ G  G  G  G P +
Sbjct: 735 GDPGPKGSRGYIGLPGL 751


>gi|410911398|ref|XP_003969177.1| PREDICTED: collagen alpha-1(XXII) chain-like [Takifugu rubripes]
          Length = 1470

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 87/145 (60%), Gaps = 12/145 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+ GP G+KG+ G+KG +G   ++GE+GE G  G VG PGP       G++G KG  G 
Sbjct: 487 PGVAGPKGEKGDTGSKGAVGPPGIRGEKGESGESGSVGLPGP------PGQKGEKGVGGI 540

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           PG  G+PGD+G  G +G+ G PG     G+ G  G+ G+ G  G  G +G+DG PGK GL
Sbjct: 541 PGIDGLPGDKGNIGIQGEAGIPGMPGPRGVPGDAGIKGDKGTSGARGESGLDGSPGKPGL 600

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNR 250
           PGKDG+ G  G  G  G+ G +  R
Sbjct: 601 PGKDGLMGLAGVPGPTGIKGEKVQR 625



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 79/158 (50%), Gaps = 21/158 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
            G+QGP G  G IG +GE G+ G  G +G PG  G  G  G PG +G RG KG+ G PG  
Sbjct: 1142 GIQGPAGLPGLIGKQGEPGLPGNPGLRGLPGFKGHRGEPGAPGVKGLRGEKGEAGSPGLP 1201

Query: 171  -------------------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                                QGIPG  G RG KGD G PG  G  G  G PG PG  G+P
Sbjct: 1202 GFSGPKGPTGPPGPAGPEGKQGIPGRVGDRGIKGDKGDPGTKGDKGHSGDPGMPGNPGVP 1261

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            GR G  G+ G  G PG+ G PG  G  G  G+ G RG 
Sbjct: 1262 GRKGHTGMMGMPGQPGEIGAPGAQGPVGNPGIPGQRGE 1299



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 69/137 (50%), Gaps = 21/137 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------------PQGI 153
            PGL+G  G KG  G  G  GVKG RGEKG  G  G PG                   QGI
Sbjct: 1165 PGLRGLPGFKGHRGEPGAPGVKGLRGEKGEAGSPGLPGFSGPKGPTGPPGPAGPEGKQGI 1224

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            PG  G RG KGD G PG +G  G  G  G  G+ G PGR G  G  G+PG+PG  G PG 
Sbjct: 1225 PGRVGDRGIKGDKGDPGTKGDKGHSGDPGMPGNPGVPGRKGHTGMMGMPGQPGEIGAPGA 1284

Query: 214  NGMDGIPGKDGLPGKDG 230
             G  G P   G+PG+ G
Sbjct: 1285 QGPVGNP---GIPGQRG 1298



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 70/128 (54%), Gaps = 9/128 (7%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG-----Y 168
           + GP GQ G  G +G  GV GERG   A G VGP G +G  GD G+RGP G  G      
Sbjct: 739 VAGPPGQAGVDGVRGGQGVPGERG---AGGPVGPKGEKGDKGDVGQRGPPGIPGDVANVI 795

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           P P G+PG  G++G KG+ G PG +G  G  G  G+PG  G PG  G+ G PG  G  G 
Sbjct: 796 PEP-GMPGKPGEKGEKGEQGKPGEMGPKGDSGPTGDPGRVGDPGLPGIIGPPGPAGQRGD 854

Query: 229 DGIPGTNG 236
            G PG  G
Sbjct: 855 KGDPGKPG 862



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 67/136 (49%), Gaps = 28/136 (20%)

Query: 157 EGKRGP----------KGDMGYP------------------GPQGIPGDEGKRGPKGDMG 188
           E KRGP          KGD G P                  GP GI G++G+ G  G +G
Sbjct: 465 EQKRGPQANCSCSAGVKGDTGAPGVAGPKGEKGDTGSKGAVGPPGIRGEKGESGESGSVG 524

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG  G  G  G+ G PG+DG+PG  G  GI G+ G+PG  G  G  G  G KG  G  G
Sbjct: 525 LPGPPGQKGEKGVGGIPGIDGLPGDKGNIGIQGEAGIPGMPGPRGVPGDAGIKGDKGTSG 584

Query: 249 NRGKSGINGVPGTPAI 264
            RG+SG++G PG P +
Sbjct: 585 ARGESGLDGSPGKPGL 600



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 67/159 (42%), Gaps = 33/159 (20%)

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL- 207
            GP G+PG  GK+G  G  G PG +G+PG +G RG  G  G  G  G  G  G PG PG  
Sbjct: 1145 GPAGLPGLIGKQGEPGLPGNPGLRGLPGFKGHRGEPGAPGVKGLRGEKGEAGSPGLPGFS 1204

Query: 208  -----------------DGIPGRNGMDGIPGKD---------------GLPGKDGIPGTN 235
                              GIPGR G  GI G                 G+PG  G+PG  
Sbjct: 1205 GPKGPTGPPGPAGPEGKQGIPGRVGDRGIKGDKGDPGTKGDKGHSGDPGMPGNPGVPGRK 1264

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            G  G  GM G  G  G  G  G  G P I   + ES SL
Sbjct: 1265 GHTGMMGMPGQPGEIGAPGAQGPVGNPGIPGQRGESVSL 1303



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 95/237 (40%), Gaps = 88/237 (37%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G  G+ G KG+ G  G RGE G   + G PG  G+PG   K G  G  G PGP
Sbjct: 562 PGMPGPRGVPGDAGIKGDKGTSGARGESG---LDGSPGKPGLPG---KDGLMGLAGVPGP 615

Query: 172 QGIPGD----EGKRGPKGDMG---------------------YPGRIGL----------- 195
            GI G+    EG RG KG  G                     +PG+ G            
Sbjct: 616 TGIKGEKVQREGLRGEKGLPGPPGPPGAIGPPGPPGPQGLQGFPGKPGEFGHKGPQGPPG 675

Query: 196 ----------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL-------------- 225
                            G  G PGE G  G+PG++G+DG+PG DG               
Sbjct: 676 PPGNQGHPGPPGLPGEIGFAGKPGEAGKPGLPGKDGLDGLPGNDGAMGDEGPPGPRGPPG 735

Query: 226 -------PGK---DGIPGTNGTNGEKGMTGP------RGNRGKSGINGVPGTPAICA 266
                  PG+   DG+ G  G  GE+G  GP      +G++G  G  G PG P   A
Sbjct: 736 ERGVAGPPGQAGVDGVRGGQGVPGERGAGGPVGPKGEKGDKGDVGQRGPPGIPGDVA 792



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 80/173 (46%), Gaps = 13/173 (7%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GF     E   PGL G  G  G  G  G MG     G RG  G  GV GPPG  G+ G  
Sbjct: 693 GFAGKPGEAGKPGLPGKDGLDGLPGNDGAMGDEGPPGPRGPPGERGVAGPPGQAGVDGVR 752

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG-------RDGLPGEPGLDGI 210
           G +G  G+ G  GP G    +G++G KGD+G  G  G+ G         G+PG+PG  G 
Sbjct: 753 GGQGVPGERGAGGPVG---PKGEKGDKGDVGQRGPPGIPGDVANVIPEPGMPGKPGEKGE 809

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G  G  G  G  G PG  G  G  G+ GP G  G+ G  G PG P 
Sbjct: 810 KGEQGKPGEMGPKGDSGPTGDPGRVGDPGLPGIIGPPGPAGQRGDKGDPGKPG 862



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 22/123 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG-------PPGPQGIPGDEGKRGPKGD 165
           G+ G  G  G +G KGE G KG+ G++G PG+ G        PG  G PG++G++     
Sbjct: 756 GVPGERGAGGPVGPKGEKGDKGDVGQRGPPGIPGDVANVIPEPGMPGKPGEKGEK----- 810

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
               G QG PG+ G +G  G  G PGR+      G PG PG+ G PG  G  G  G  G 
Sbjct: 811 ----GEQGKPGEMGPKGDSGPTGDPGRV------GDPGLPGIIGPPGPAGQRGDKGDPGK 860

Query: 226 PGK 228
           PG+
Sbjct: 861 PGQ 863



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 40/167 (23%)

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---------------GKDGL 225
            +G +G  G PG IG  G  GLPG PGL G+PG  G  G P               G  GL
Sbjct: 1141 KGIQGPAGLPGLIGKQGEPGLPGNPGLRGLPGFKGHRGEPGAPGVKGLRGEKGEAGSPGL 1200

Query: 226  PG------------------KDGIPGT---NGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PG                  K GIPG     G  G+KG  G +G++G SG  G+PG P +
Sbjct: 1201 PGFSGPKGPTGPPGPAGPEGKQGIPGRVGDRGIKGDKGDPGTKGDKGHSGDPGMPGNPGV 1260

Query: 265  CAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRL 311
               K  +  +    +  ++  P    G++    +  I  + G++V L
Sbjct: 1261 PGRKGHTGMMGMPGQPGEIGAP----GAQGPVGNPGIPGQRGESVSL 1303



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 49/83 (59%), Gaps = 4/83 (4%)

Query: 111 PPGLQGPIGQK-GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           PPG+ G +     E G  G+ G KGE+GE+G PG +GP G  G  GD G+    GD G P
Sbjct: 784 PPGIPGDVANVIPEPGMPGKPGEKGEKGEQGKPGEMGPKGDSGPTGDPGR---VGDPGLP 840

Query: 170 GPQGIPGDEGKRGPKGDMGYPGR 192
           G  G PG  G+RG KGD G PG+
Sbjct: 841 GIIGPPGPAGQRGDKGDPGKPGQ 863



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 61/150 (40%), Gaps = 48/150 (32%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG--------------------------- 128
            L  + GF     E   PG++G  G+KGE G+ G                           
Sbjct: 1167 LRGLPGFKGHRGEPGAPGVKGLRGEKGEAGSPGLPGFSGPKGPTGPPGPAGPEGKQGIPG 1226

Query: 129  ---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
               + G+KG++G+               PG +G +G  GD G PG  G+PG +G  G  G
Sbjct: 1227 RVGDRGIKGDKGD---------------PGTKGDKGHSGDPGMPGNPGVPGRKGHTGMMG 1271

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
              G PG IG  G  G  G P   GIPG+ G
Sbjct: 1272 MPGQPGEIGAPGAQGPVGNP---GIPGQRG 1298



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 77/155 (49%), Gaps = 25/155 (16%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E+G  G+ GE G PG+ G  G  G+PG++G  G   D G PGP+G PG+ G  GP G  G
Sbjct: 691 EIGFAGKPGEAGKPGLPGKDGLDGLPGNDGAMG---DEGPPGPRGPPGERGVAGPPGQAG 747

Query: 189 YPGRIGLDGRDGLPGEPGLDGI------------PGRNGMDGIPG-------KDGLPGKD 229
                G+ G  G+PGE G  G              G+ G  GIPG       + G+PGK 
Sbjct: 748 V---DGVRGGQGVPGERGAGGPVGPKGEKGDKGDVGQRGPPGIPGDVANVIPEPGMPGKP 804

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G  G  G+ G  GP+G+ G +G  G  G P +
Sbjct: 805 GEKGEKGEQGKPGEMGPKGDSGPTGDPGRVGDPGL 839


>gi|334311980|ref|XP_001372420.2| PREDICTED: collagen alpha-1(V) chain [Monodelphis domestica]
          Length = 1825

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/151 (46%), Positives = 83/151 (54%), Gaps = 24/151 (15%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG+MG+KG+RGE      +GPPGP+G      + GP+G  G  
Sbjct: 789 GLKGTKGEKGEDGFPGFKGDMGIKGDRGE------IGPPGPRG------EDGPEGPKGRG 836

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G PG  G  G KG +G PG         LPG PG  G  G  G  G PG +G  G  
Sbjct: 837 GPNGDPGPLGPAGEKGKLGVPG---------LPGYPGRQGPKGSIGFSGFPGANGEKGGR 887

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G  G++G TGPRG RG  GI G PG
Sbjct: 888 GTPGKPGPRGQRGPTGPRGERGPRGITGKPG 918



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 61/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1391 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 1447

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1448 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGI 1507



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 863 PGRQGP---KGSIGFSGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 919

Query: 172 QG 173
           +G
Sbjct: 920 KG 921



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 12/94 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           G +GP G+ G  G  G +G  GE+G+ G PG+ G PG QG          PG  G++G +
Sbjct: 828 GPEGPKGRGGPNGDPGPLGPAGEKGKLGVPGLPGYPGRQGPKGSIGFSGFPGANGEKGGR 887

Query: 164 GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIG 194
           G  G PGP+G     G  G+RGP+G  G PG  G
Sbjct: 888 GTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 921



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG                   
Sbjct: 1391 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1450

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                     +G  GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1451 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1503



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 87/220 (39%), Gaps = 87/220 (39%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPGVVGPP 148
           G+ G  G KG+ G  G  G+ GE+G +                        G  G+ G P
Sbjct: 606 GMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEP 665

Query: 149 GPQG---------------IPGDEGKRGPKGDMGY------------PGPQGIPGDEGKR 181
           GP+G               + G +G+ GPKG++G             PG QG+PG +G  
Sbjct: 666 GPRGLLGPKGPPGPPGPPGVTGMDGQTGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAI 725

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------------------ 223
           GP G+ G  G+            PGL G+PG +G  G PGK+                  
Sbjct: 726 GPPGEKGPLGK------------PGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPI 773

Query: 224 ------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                 G+ G DGI G  GT GEKG  G  G +G  GI G
Sbjct: 774 GYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKG 813



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 74/193 (38%), Gaps = 75/193 (38%)

Query: 119 GQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G+ G++G +G  GV+G          RG  G+ G  G PG         + GPKGD G+ 
Sbjct: 570 GETGDMGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPG---------QTGPKGDRGFD 620

Query: 170 GPQGIPGDEGKR------------------------GPKGDMGYPGR------------- 192
           G  G+PG++G R                        GP+G  G PG              
Sbjct: 621 GLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPP 680

Query: 193 -----IGLDGRDGLPG---------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                 G+DG+ G  G                PG  G+PG  G  G PG+ G  GK G+P
Sbjct: 681 GPPGVTGMDGQTGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLP 740

Query: 233 GTNGTNGEKGMTG 245
           G  G +G  G  G
Sbjct: 741 GMPGADGPPGHPG 753



 Score = 40.0 bits (92), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 89/277 (32%), Gaps = 132/277 (47%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKR-------------------- 160
           +G  G  G R   G PG  GP G +      G+PG++G R                    
Sbjct: 596 RGRAGSDGAR---GMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGD 652

Query: 161 ----GPKGDMGYPGP--------------------------------------------- 171
               GP+G  G PGP                                             
Sbjct: 653 DGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQTGPKGNVGPQGEPGPPGQQGN 712

Query: 172 ---QGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEP-------------------- 205
              QG+PG +G  GP   KG +G PG  G+ G DG PG P                    
Sbjct: 713 PGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGP 772

Query: 206 ----------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------ 249
                     G DGI G  G  G  G+DG PG  G  G  G  GE G  GPRG       
Sbjct: 773 IGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGP 832

Query: 250 RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           +G+ G NG PG             L P  E  +L +P
Sbjct: 833 KGRGGPNGDPG------------PLGPAGEKGKLGVP 857


>gi|256085618|ref|XP_002579013.1| Collagen alpha-1(V) chain precursor [Schistosoma mansoni]
          Length = 1524

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/158 (48%), Positives = 87/158 (55%), Gaps = 15/158 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+GP G  G  G  G  G KGERG+ G PG VGP GP      +G +GP G  G  GP
Sbjct: 896  PGLEGPAGSDGMAGLPGPAGDKGERGDPGLPGTVGPIGP------DGDQGPSGAPGKIGP 949

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGK 228
             G PG+ GK    G+MG PG  GL GR GLPG PG DG  G+    G +G  G DG PG 
Sbjct: 950  TGPPGNVGK---PGEMGPPGNAGLPGRTGLPGPPGKDGQVGKQGPRGEEGPRGPDGNPGI 1006

Query: 229  DGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGTPA 263
             G PG +G     G +G  GP G RG  G+ G PG P 
Sbjct: 1007 QGPPGASGVKGPPGSRGPVGPTGMRGPPGLIGQPGPPG 1044



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 94/173 (54%), Gaps = 24/173 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQG------------IPGDE 157
           G  GP+G  G+ G  G  G+KG RG +G PGV+G    PG  G            I G  
Sbjct: 222 GHSGPVGNDGKAGPIGRPGLKGARGPRGMPGVMGEAGLPGAMGLRGERGERGEEGIKGMA 281

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  GPKG  G  GP+G  G +G+RG   P+G MG PG IG+DG DG+PG PG  G PG  
Sbjct: 282 GDYGPKGLPGPVGPKGSIGLQGQRGEPGPRGFMGLPGPIGVDGTDGVPGAPGDPGAPGSQ 341

Query: 215 GMDGIPGKDGLPGKDGIPGTNGT------NGEKGMTGPRGNRGKSGINGVPGT 261
           G  G+ G +G  G+ G+PG  G        G++G  GP GN GK G +G PGT
Sbjct: 342 GSPGLQGPEGPKGQPGLPGPKGEVGFPGLRGDRGAPGPSGNPGKQGTHGPPGT 394



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 95/196 (48%), Gaps = 24/196 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           +Y P GL GP+G KG IG      ++G+RGE G  G +G PGP G+ G +G  G  GD G
Sbjct: 283 DYGPKGLPGPVGPKGSIG------LQGQRGEPGPRGFMGLPGPIGVDGTDGVPGAPGDPG 336

Query: 168 YPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---- 220
            PG QG PG +G  GPKG  G P   G +G  G  G  G PG  G PG+ G  G P    
Sbjct: 337 APGSQGSPGLQGPEGPKGQPGLPGPKGEVGFPGLRGDRGAPGPSGNPGKQGTHGPPGTIG 396

Query: 221 --------GKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPGTPAICAYKR 269
                   G  G PG  GI G +G  GE G+    GP G+ G  G  G+PG   I   + 
Sbjct: 397 NKGEPGDRGHPGKPGMMGIRGFSGGEGEIGLVGAKGPEGSVGLQGAQGLPGPEGIKGRRG 456

Query: 270 ESCSLLPNSETSQLLI 285
           E   L P  E     I
Sbjct: 457 ERGPLGPVGEQGSRGI 472



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G+ G+ G KG PG VGP G  G+ G  G+ GP+G MG PGP G+ G +G  G  GD G P
Sbjct: 279 GMAGDYGPKGLPGPVGPKGSIGLQGQRGEPGPRGFMGLPGPIGVDGTDGVPGAPGDPGAP 338

Query: 191 ---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
              G  GL G +G  G+PGL G  G  G  G+ G  G PG  G PG  GT+G  G     
Sbjct: 339 GSQGSPGLQGPEGPKGQPGLPGPKGEVGFPGLRGDRGAPGPSGNPGKQGTHGPPGTI--- 395

Query: 248 GNRGKSGINGVPGTPAICAYK 268
           GN+G+ G  G PG P +   +
Sbjct: 396 GNKGEPGDRGHPGKPGMMGIR 416



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/160 (43%), Positives = 86/160 (53%), Gaps = 15/160 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ G  G  G  G++G  G++G  G KG PG+ GP G  G PG  G RG  G  G PG Q
Sbjct: 327 GVPGAPGDPGAPGSQGSPGLQGPEGPKGQPGLPGPKGEVGFPGLRGDRGAPGPSGNPGKQ 386

Query: 173 GI---PGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G    PG  G +G  GD G+PG+   +G+ G  G  GE GL G  G  G  G+ G  GLP
Sbjct: 387 GTHGPPGTIGNKGEPGDRGHPGKPGMMGIRGFSGGEGEIGLVGAKGPEGSVGLQGAQGLP 446

Query: 227 GKDGIPGTNGTNGEKGMTGP------RGNRGKSGINGVPG 260
           G +GI    G  GE+G  GP      RG RG +G++G PG
Sbjct: 447 GPEGI---KGRRGERGPLGPVGEQGSRGIRGSAGLSGAPG 483



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 71/127 (55%), Gaps = 6/127 (4%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL GP G+ G++G +G  G +G RG  G PG+ GPPG  G+ G  G RGP G  G  GP 
Sbjct: 975  GLPGPPGKDGQVGKQGPRGEEGPRGPDGNPGIQGPPGASGVKGPPGSRGPVGPTGMRGPP 1034

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+ G  G  G +G  G PG+ G DG +G  G PG  G P      G+PG  G  G +G P
Sbjct: 1035 GLIGQPGPPGKQGSQGRPGKPGPDGFEGKRGPPGEIGAP------GVPGNKGPVGDEGEP 1088

Query: 233  GTNGTNG 239
            G+ G +G
Sbjct: 1089 GSRGASG 1095



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 80/176 (45%), Gaps = 33/176 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G +G+KG  G +G RGE GAPG  GP G +G  G  GKRGP G  G  GP
Sbjct: 572 PGSVGKTGDPGAVGSKGPRGDRGPRGEPGAPGPFGPSGEKGQRGQSGKRGPMGAEGRVGP 631

Query: 172 QGIPGDEGKRGPKGD------------------------------MGYPGRIGLDGRDGL 201
           +G PG  GK G  G                                G  G  G  GRDG 
Sbjct: 632 EGSPGTPGKPGDPGPAGEPGHIGPPGPPGERGAPGQMGPPGPPGRAGDKGASGPVGRDGA 691

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G+ G  G  G +G  G+P   GL G  GI G  G  G++G TGPRG  G  G+ G
Sbjct: 692 KGDRGEKGDMGDSGTVGVP---GLVGNTGIRGERGEKGDRGPTGPRGEPGPIGVPG 744



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 77/158 (48%), Gaps = 21/158 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP+G+ G  G +GE G  G+ G  G PG+VG  G +G  G++G RGP G  G PGP 
Sbjct: 681 GASGPVGRDGAKGDRGEKGDMGDSGTVGVPGLVGNTGIRGERGEKGDRGPTGPRGEPGPI 740

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG----- 227
           G+PG  G  GP   MG+P      G  G PG  G+ GI G  G  G PG  G  G     
Sbjct: 741 GVPGQRGADGP---MGHP------GPQGRPGNKGILGIRGYQGDKGTPGDQGPQGIPGDP 791

Query: 228 -------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                    G  G  G  GE G  GPRG  G  GI GV
Sbjct: 792 GIPGQPGPPGSVGMKGVKGEMGPRGPRGEAGNMGIKGV 829



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 78/177 (44%), Gaps = 36/177 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
           PG  GP G  GE   KG+ G  G+RG  GA G VGP G  G PG  G  GP         
Sbjct: 599 PGAPGPFGPSGE---KGQRGQSGKRGPMGAEGRVGPEGSPGTPGKPGDPGPAGEPGHIGP 655

Query: 163 ---------------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                                 GD G  GP G  G +G RG KGDMG  G +G+    GL
Sbjct: 656 PGPPGERGAPGQMGPPGPPGRAGDKGASGPVGRDGAKGDRGEKGDMGDSGTVGV---PGL 712

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G+ G  G  G  G  G  G PG  G+PG  G +G  G  GP+G  G  GI G+
Sbjct: 713 VGNTGIRGERGEKGDRGPTGPRGEPGPIGVPGQRGADGPMGHPGPQGRPGNKGILGI 769



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 93/210 (44%), Gaps = 60/210 (28%)

Query: 112 PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGD 156
           PGLQGP G KG+ G    KGE+G  G RG++GAPG  G PG QG             PGD
Sbjct: 344 PGLQGPEGPKGQPGLPGPKGEVGFPGLRGDRGAPGPSGNPGKQGTHGPPGTIGNKGEPGD 403

Query: 157 EG------------------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            G                         +GP+G +G  G QG+PG EG +G +G+ G  G 
Sbjct: 404 RGHPGKPGMMGIRGFSGGEGEIGLVGAKGPEGSVGLQGAQGLPGPEGIKGRRGERGPLGP 463

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---------------------GLPGKDGI 231
           +G  G  G+ G  GL G PG  G  G+PG                       G  G+ G 
Sbjct: 464 VGEQGSRGIRGSAGLSGAPGHEGSRGLPGLRGPPGPEGPPGAIGPGGAPGITGPVGEKGA 523

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G +G KG TGPRG  G  G  G+PG 
Sbjct: 524 QGDIGPSGLKGPTGPRGPLGSIGRPGMPGA 553



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 94/233 (40%), Gaps = 67/233 (28%)

Query: 125  GAKGEMGVKGERGEKGAPGVV---------------------GPPGPQGIPGDEG----- 158
            G KGEMG +G RGE G  G+                      G PG QG  G EG     
Sbjct: 807  GVKGEMGPRGPRGEAGNMGIKGVQGPPGPKGHPGLSGQQGDRGQPGVQGDQGSEGLIGEP 866

Query: 159  ----------------------KRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYP 190
                                   +G  GD G  GP       G+PG  G +G +GD G P
Sbjct: 867  GPQGPPGENGRPGPPGPAGQTGPKGEAGDPGLEGPAGSDGMAGLPGPAGDKGERGDPGLP 926

Query: 191  GRIGLDGRD------GLPGEPGLDGIP---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G +G  G D      G PG+ G  G P   G+ G  G PG  GLPG+ G+PG  G +G+ 
Sbjct: 927  GTVGPIGPDGDQGPSGAPGKIGPTGPPGNVGKPGEMGPPGNAGLPGRTGLPGPPGKDGQV 986

Query: 242  GMTGPRGNRGKSGINGVP---GTPAICAYKRESCSLLPNSETSQLLIPPTIVG 291
            G  GPRG  G  G +G P   G P     K    S  P   T  +  PP ++G
Sbjct: 987  GKQGPRGEEGPRGPDGNPGIQGPPGASGVKGPPGSRGPVGPTG-MRGPPGLIG 1038



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 93/223 (41%), Gaps = 66/223 (29%)

Query: 104 NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---------------RGEKGAPGVVGPP 148
            +  +  P GL+GP G +G +G+ G  G+ G                RG  G+ G  G P
Sbjct: 522 GAQGDIGPSGLKGPTGPRGPLGSIGRPGMPGAAGIPGPHGPQGGQGLRGLPGSVGKTGDP 581

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEP 205
           G  G  G  G RGP+G+ G PGP G  G++G+R   G +G MG  GR+G +G  G PG+P
Sbjct: 582 GAVGSKGPRGDRGPRGEPGAPGPFGPSGEKGQRGQSGKRGPMGAEGRVGPEGSPGTPGKP 641

Query: 206 ---------------------------------------GLDGIPGRNGMDGIPGKD--- 223
                                                  G  G  GR+G  G  G+    
Sbjct: 642 GDPGPAGEPGHIGPPGPPGERGAPGQMGPPGPPGRAGDKGASGPVGRDGAKGDRGEKGDM 701

Query: 224 ------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                 G+PG  G  G  G  GEKG  GP G RG+ G  GVPG
Sbjct: 702 GDSGTVGVPGLVGNTGIRGERGEKGDRGPTGPRGEPGPIGVPG 744



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 9/100 (9%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG   ++    PPG +GP+G  G  G  G +G  G  G++G+ G  G PGP G    E
Sbjct: 1005 GIQGPPGASGVKGPPGSRGPVGPTGMRGPPGLIGQPGPPGKQGSQGRPGKPGPDGF---E 1061

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            GKRGP G++G P   G+PG+   +GP GD G PG  G  G
Sbjct: 1062 GKRGPPGEIGAP---GVPGN---KGPVGDEGEPGSRGASG 1095



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 79/178 (44%), Gaps = 42/178 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------------------ 148
           G +G  G++G +GA+G +G +G  G  G PG  GP                         
Sbjct: 612 GQRGQSGKRGPMGAEGRVGPEGSPGTPGKPGDPGPAGEPGHIGPPGPPGERGAPGQMGPP 671

Query: 149 ------------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                       GP G  G +G RG KGDMG  G  G+PG  G  G +G+ G  G  G  
Sbjct: 672 GPPGRAGDKGASGPVGRDGAKGDRGEKGDMGDSGTVGVPGLVGNTGIRGERGEKGDRGPT 731

Query: 197 GRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           G     GEPG  G+PG+ G DG    PG  G PG  GI G  G  G+KG  G +G +G
Sbjct: 732 GPR---GEPGPIGVPGQRGADGPMGHPGPQGRPGNKGILGIRGYQGDKGTPGDQGPQG 786



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 84/198 (42%), Gaps = 51/198 (25%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---------------- 154
           P G++G  G++G +G  GE G +G RG     G+ G PG +G                  
Sbjct: 448 PEGIKGRRGERGPLGPVGEQGSRGIRGSA---GLSGAPGHEGSRGLPGLRGPPGPEGPPG 504

Query: 155 -----------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---- 199
                      G  G++G +GD+   GP G+ G  G RGP G +G PG  G  G      
Sbjct: 505 AIGPGGAPGITGPVGEKGAQGDI---GPSGLKGPTGPRGPLGSIGRPGMPGAAGIPGPHG 561

Query: 200 --------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------TG 245
                   GLPG  G  G PG  G  G  G  G  G+ G PG  G +GEKG        G
Sbjct: 562 PQGGQGLRGLPGSVGKTGDPGAVGSKGPRGDRGPRGEPGAPGPFGPSGEKGQRGQSGKRG 621

Query: 246 PRGNRGKSGINGVPGTPA 263
           P G  G+ G  G PGTP 
Sbjct: 622 PMGAEGRVGPEGSPGTPG 639



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 89/238 (37%), Gaps = 90/238 (37%)

Query: 113 GLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP--------------- 154
           G  GP+G    +G  G KG +G++G +G+KG PG  GP   QGIP               
Sbjct: 747 GADGPMGHPGPQGRPGNKGILGIRGYQGDKGTPGDQGP---QGIPGDPGIPGQPGPPGSV 803

Query: 155 ------GDEGKRGPK---------------------------GDMGYPGPQGIPGDEG-- 179
                 G+ G RGP+                           GD G PG QG  G EG  
Sbjct: 804 GMKGVKGEMGPRGPRGEAGNMGIKGVQGPPGPKGHPGLSGQQGDRGQPGVQGDQGSEGLI 863

Query: 180 -------------------------KRGPKGDMGYPGRIGLDGRDGLP---------GEP 205
                                     +G  GD G  G  G DG  GLP         G+P
Sbjct: 864 GEPGPQGPPGENGRPGPPGPAGQTGPKGEAGDPGLEGPAGSDGMAGLPGPAGDKGERGDP 923

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           GL G  G  G DG  G  G PGK G  G  G  G+ G  GP GN G  G  G+PG P 
Sbjct: 924 GLPGTVGPIGPDGDQGPSGAPGKIGPTGPPGNVGKPGEMGPPGNAGLPGRTGLPGPPG 981



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 63/148 (42%), Gaps = 22/148 (14%)

Query: 72   REKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGP---IGQKGEIGAKG 128
            R +E       NP +     +      ++G   S     P G++GP   IGQ G  G +G
Sbjct: 992  RGEEGPRGPDGNPGIQGPPGA----SGVKGPPGSRGPVGPTGMRGPPGLIGQPGPPGKQG 1047

Query: 129  EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD----------- 177
              G  G+ G  G  G  GPPG  G PG  G +GP GD G PG +G  G+           
Sbjct: 1048 SQGRPGKPGPDGFEGKRGPPGEIGAPGVPGNKGPVGDEGEPGSRGASGNMGLTGPPGDGG 1107

Query: 178  ----EGKRGPKGDMGYPGRIGLDGRDGL 201
                 G  G +G  G PG +GL G  GL
Sbjct: 1108 PPGLPGIPGSRGTQGPPGEVGLKGEAGL 1135


>gi|357625680|gb|EHJ76043.1| putative Collagen alpha-1(XI) chain precursor [Danaus plexippus]
          Length = 918

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/152 (44%), Positives = 87/152 (57%), Gaps = 12/152 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGLQG         ++G+ G+ G  G +G+PG  G PG QG  GD G  GP+G +G+PGP
Sbjct: 667 PGLQG---------SQGKQGISGLPGPEGSPGTPGTPGQQGPAGDVGLPGPQGMLGFPGP 717

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           +G+ GD+G RGP GD G  G  G++G     G  GE G+ G PG  G++G  G+ G  G 
Sbjct: 718 RGLKGDDGPRGPPGDKGDKGIRGIEGEKGEMGQKGERGVAGEPGPAGIEGPEGQKGSEGP 777

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  GEKG TGP+G  G  G  G  G
Sbjct: 778 RGETGSIGPVGEKGATGPQGPSGYPGAQGEKG 809



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 92/187 (49%), Gaps = 24/187 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G KG+ G +G  G KGE G+KG  GV G PGP GI G EG++G +G  G  G  
Sbjct: 725 GPRGPPGDKGDKGIRGIEGEKGEMGQKGERGVAGEPGPAGIEGPEGQKGSEGPRGETGSI 784

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------PGLDGIPGRNG-------- 215
           G  G++G  GP+G  GYPG  G  G  G  G           GL GIPG  G        
Sbjct: 785 GPVGEKGATGPQGPSGYPGAQGEKGDKGASGRRGRRGSKGVAGLVGIPGDRGESGPRGYR 844

Query: 216 -------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                   DG PG  G  G+ G PG++G  G +G+ GPRG  G  G  G+ G P I    
Sbjct: 845 GPRGRRGSDGPPGPKGDTGQPGPPGSSGERGPQGLEGPRGYPGSIGPPGIDGKPGIPGTP 904

Query: 269 RESCSLL 275
            E  S +
Sbjct: 905 GERGSTV 911



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 78/141 (55%), Gaps = 3/141 (2%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---M 187
           G++G +G++G  G+ GP G  G PG  G++GP GD+G PGPQG+ G  G RG KGD    
Sbjct: 668 GLQGSQGKQGISGLPGPEGSPGTPGTPGQQGPAGDVGLPGPQGMLGFPGPRGLKGDDGPR 727

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G PG  G  G  G+ GE G  G  G  G+ G PG  G+ G +G  G+ G  GE G  GP 
Sbjct: 728 GPPGDKGDKGIRGIEGEKGEMGQKGERGVAGEPGPAGIEGPEGQKGSEGPRGETGSIGPV 787

Query: 248 GNRGKSGINGVPGTPAICAYK 268
           G +G +G  G  G P     K
Sbjct: 788 GEKGATGPQGPSGYPGAQGEK 808



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 91/220 (41%), Gaps = 81/220 (36%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------KGDMGYPGPQ 172
           G KGE G +GE G  G RG +G PG +G    +G PG +G+RGP      KGD GYPG  
Sbjct: 506 GSKGEQGDQGEPGPPGSRGLQGQPGRLGR---RGHPGRDGERGPPGPQGLKGDQGYPGQA 562

Query: 173 GIPGDEGKRGPKGD------------------------------------------MGYP 190
           GIPGD+G+RG  G                                           +GYP
Sbjct: 563 GIPGDKGERGTPGQQGETGAPGLDGPPGEDGPPGPPGISGELGPRGFTGPRGFPGLIGYP 622

Query: 191 GRIGLDGRDGLPGE------------------------------PGLDGIPGRNGMDGIP 220
           G  G +G+ G+ G                               PGL G  G+ G+ G+P
Sbjct: 623 GIPGNEGQQGIKGAAGQPGPPGSPGQPGVMGPPGSPGPQGPIGAPGLQGSQGKQGISGLP 682

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G +G PG  G PG  G  G+ G+ GP+G  G  G  G+ G
Sbjct: 683 GPEGSPGTPGTPGQQGPAGDVGLPGPQGMLGFPGPRGLKG 722



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 92/222 (41%), Gaps = 57/222 (25%)

Query: 113 GLQGPIGQKGEIGA------------------KGEMGVKGERGEKGAPGVVGPPGPQGIP 154
           G +G  GQ+GE GA                   GE+G +G  G +G PG++G PG   IP
Sbjct: 569 GERGTPGQQGETGAPGLDGPPGEDGPPGPPGISGELGPRGFTGPRGFPGLIGYPG---IP 625

Query: 155 GDEGKRGPKGD---------------------------------MGYPGPQGIPGDEGKR 181
           G+EG++G KG                                   G  G QGI G  G  
Sbjct: 626 GNEGQQGIKGAAGQPGPPGSPGQPGVMGPPGSPGPQGPIGAPGLQGSQGKQGISGLPGPE 685

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G  G  G PG+ G  G  GLPG  G+ G PG  G+ G  G  G PG  G  G  G  GEK
Sbjct: 686 GSPGTPGTPGQQGPAGDVGLPGPQGMLGFPGPRGLKGDDGPRGPPGDKGDKGIRGIEGEK 745

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
           G  G +G R   G+ G PG   I   + +  S  P  ET  +
Sbjct: 746 GEMGQKGER---GVAGEPGPAGIEGPEGQKGSEGPRGETGSI 784



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 92/225 (40%), Gaps = 54/225 (24%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---- 152
           +  +G      E  PPG   P G KG+ G  G+ G+ G++GE+G PG  G  G  G    
Sbjct: 532 LGRRGHPGRDGERGPPG---PQGLKGDQGYPGQAGIPGDKGERGTPGQQGETGAPGLDGP 588

Query: 153 -----------IPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDM----------- 187
                      I G+ G RG  G  G+PG     GIPG+EG++G KG             
Sbjct: 589 PGEDGPPGPPGISGELGPRGFTGPRGFPGLIGYPGIPGNEGQQGIKGAAGQPGPPGSPGQ 648

Query: 188 -------------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                              G  G  G  G  GLPG  G  G PG  G  G  G  GLPG 
Sbjct: 649 PGVMGPPGSPGPQGPIGAPGLQGSQGKQGISGLPGPEGSPGTPGTPGQQGPAGDVGLPGP 708

Query: 229 DGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+   PG  G  G+ G  GP G++G  GI G+ G       K E
Sbjct: 709 QGMLGFPGPRGLKGDDGPRGPPGDKGDKGIRGIEGEKGEMGQKGE 753



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 72/161 (44%), Gaps = 48/161 (29%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ-- 151
           +  +G      E  P G++GP GQKG  G +GE G  G  GEKGA G  GP   PG Q  
Sbjct: 748 MGQKGERGVAGEPGPAGIEGPEGQKGSEGPRGETGSIGPVGEKGATGPQGPSGYPGAQGE 807

Query: 152 ----------------------GIPGDEGKR------------------GPKGDMGYPGP 171
                                 GIPGD G+                   GPKGD G PGP
Sbjct: 808 KGDKGASGRRGRRGSKGVAGLVGIPGDRGESGPRGYRGPRGRRGSDGPPGPKGDTGQPGP 867

Query: 172 QGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDG 209
            G  G+ G +G +G  GYPG I   G+DG+ G+PG PG  G
Sbjct: 868 PGSSGERGPQGLEGPRGYPGSIGPPGIDGKPGIPGTPGERG 908



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 69/209 (33%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------------------------- 145
           QGP G KGE    G+ G +G++G +GAPG V                             
Sbjct: 424 QGPRGPKGE---PGKPGAEGQQGFQGAPGHVFVVPLPQSGNDKGPDAHSEALRQMLTQHM 480

Query: 146 ----GPPGPQGIPGD---------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
               G  GP G+ G          EG +G +GD G PGP G  G +G+ G  G  G+PGR
Sbjct: 481 ASMRGAEGPMGLTGPPGPEGPTGVEGSKGEQGDQGEPGPPGSRGLQGQPGRLGRRGHPGR 540

Query: 193 IGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGT--------------- 234
              DG  G PG  GL    G PG+ G+ G  G+ G PG+ G  G                
Sbjct: 541 ---DGERGPPGPQGLKGDQGYPGQAGIPGDKGERGTPGQQGETGAPGLDGPPGEDGPPGP 597

Query: 235 ---NGTNGEKGMTGPRGNRGKSGINGVPG 260
              +G  G +G TGPRG  G  G  G+PG
Sbjct: 598 PGISGELGPRGFTGPRGFPGLIGYPGIPG 626


>gi|360043236|emb|CCD78649.1| putative collagen alpha-1(V) chain precursor [Schistosoma mansoni]
          Length = 1524

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/158 (48%), Positives = 87/158 (55%), Gaps = 15/158 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+GP G  G  G  G  G KGERG+ G PG VGP GP      +G +GP G  G  GP
Sbjct: 896  PGLEGPAGSDGMAGLPGPAGDKGERGDPGLPGTVGPIGP------DGDQGPSGAPGKIGP 949

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGK 228
             G PG+ GK    G+MG PG  GL GR GLPG PG DG  G+    G +G  G DG PG 
Sbjct: 950  TGPPGNVGK---PGEMGPPGNAGLPGRTGLPGPPGKDGQVGKQGPRGEEGPRGPDGNPGI 1006

Query: 229  DGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGTPA 263
             G PG +G     G +G  GP G RG  G+ G PG P 
Sbjct: 1007 QGPPGASGVKGPPGSRGPVGPTGMRGPPGLIGQPGPPG 1044



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 94/173 (54%), Gaps = 24/173 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQG------------IPGDE 157
           G  GP+G  G+ G  G  G+KG RG +G PGV+G    PG  G            I G  
Sbjct: 222 GHSGPVGNDGKAGPIGRPGLKGARGPRGMPGVMGEAGLPGAMGLRGERGERGEEGIKGMA 281

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  GPKG  G  GP+G  G +G+RG   P+G MG PG IG+DG DG+PG PG  G PG  
Sbjct: 282 GDYGPKGLPGPVGPKGSIGLQGQRGEPGPRGFMGLPGPIGVDGTDGVPGAPGDPGAPGSQ 341

Query: 215 GMDGIPGKDGLPGKDGIPGTNGT------NGEKGMTGPRGNRGKSGINGVPGT 261
           G  G+ G +G  G+ G+PG  G        G++G  GP GN GK G +G PGT
Sbjct: 342 GSPGLQGPEGPKGQPGLPGPKGEVGFPGLRGDRGAPGPSGNPGKQGTHGPPGT 394



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 95/196 (48%), Gaps = 24/196 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           +Y P GL GP+G KG IG      ++G+RGE G  G +G PGP G+ G +G  G  GD G
Sbjct: 283 DYGPKGLPGPVGPKGSIG------LQGQRGEPGPRGFMGLPGPIGVDGTDGVPGAPGDPG 336

Query: 168 YPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---- 220
            PG QG PG +G  GPKG  G P   G +G  G  G  G PG  G PG+ G  G P    
Sbjct: 337 APGSQGSPGLQGPEGPKGQPGLPGPKGEVGFPGLRGDRGAPGPSGNPGKQGTHGPPGTIG 396

Query: 221 --------GKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPGTPAICAYKR 269
                   G  G PG  GI G +G  GE G+    GP G+ G  G  G+PG   I   + 
Sbjct: 397 NKGEPGDRGHPGKPGMMGIRGFSGGEGEIGLVGAKGPEGSVGLQGAQGLPGPEGIKGRRG 456

Query: 270 ESCSLLPNSETSQLLI 285
           E   L P  E     I
Sbjct: 457 ERGPLGPVGEQGSRGI 472



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G+ G+ G KG PG VGP G  G+ G  G+ GP+G MG PGP G+ G +G  G  GD G P
Sbjct: 279 GMAGDYGPKGLPGPVGPKGSIGLQGQRGEPGPRGFMGLPGPIGVDGTDGVPGAPGDPGAP 338

Query: 191 ---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
              G  GL G +G  G+PGL G  G  G  G+ G  G PG  G PG  GT+G  G     
Sbjct: 339 GSQGSPGLQGPEGPKGQPGLPGPKGEVGFPGLRGDRGAPGPSGNPGKQGTHGPPGTI--- 395

Query: 248 GNRGKSGINGVPGTPAICAYK 268
           GN+G+ G  G PG P +   +
Sbjct: 396 GNKGEPGDRGHPGKPGMMGIR 416



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/160 (43%), Positives = 86/160 (53%), Gaps = 15/160 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ G  G  G  G++G  G++G  G KG PG+ GP G  G PG  G RG  G  G PG Q
Sbjct: 327 GVPGAPGDPGAPGSQGSPGLQGPEGPKGQPGLPGPKGEVGFPGLRGDRGAPGPSGNPGKQ 386

Query: 173 GI---PGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G    PG  G +G  GD G+PG+   +G+ G  G  GE GL G  G  G  G+ G  GLP
Sbjct: 387 GTHGPPGTIGNKGEPGDRGHPGKPGMMGIRGFSGGEGEIGLVGAKGPEGSVGLQGAQGLP 446

Query: 227 GKDGIPGTNGTNGEKGMTGP------RGNRGKSGINGVPG 260
           G +GI    G  GE+G  GP      RG RG +G++G PG
Sbjct: 447 GPEGI---KGRRGERGPLGPVGEQGSRGIRGSAGLSGAPG 483



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 71/127 (55%), Gaps = 6/127 (4%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL GP G+ G++G +G  G +G RG  G PG+ GPPG  G+ G  G RGP G  G  GP 
Sbjct: 975  GLPGPPGKDGQVGKQGPRGEEGPRGPDGNPGIQGPPGASGVKGPPGSRGPVGPTGMRGPP 1034

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+ G  G  G +G  G PG+ G DG +G  G PG  G P      G+PG  G  G +G P
Sbjct: 1035 GLIGQPGPPGKQGSQGRPGKPGPDGFEGKRGPPGEIGAP------GVPGNKGPVGDEGEP 1088

Query: 233  GTNGTNG 239
            G+ G +G
Sbjct: 1089 GSRGASG 1095



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 80/176 (45%), Gaps = 33/176 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G +G+KG  G +G RGE GAPG  GP G +G  G  GKRGP G  G  GP
Sbjct: 572 PGSVGKTGDPGAVGSKGPRGDRGPRGEPGAPGPFGPSGEKGQRGQSGKRGPMGAEGRVGP 631

Query: 172 QGIPGDEGKRGPKGD------------------------------MGYPGRIGLDGRDGL 201
           +G PG  GK G  G                                G  G  G  GRDG 
Sbjct: 632 EGSPGTPGKPGDPGPAGEPGHIGPPGPPGERGAPGQMGPPGPPGRAGDKGASGPVGRDGA 691

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G+ G  G  G +G  G+P   GL G  GI G  G  G++G TGPRG  G  G+ G
Sbjct: 692 KGDRGEKGDMGDSGTVGVP---GLVGNTGIRGERGEKGDRGPTGPRGEPGPIGVPG 744



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 77/158 (48%), Gaps = 21/158 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP+G+ G  G +GE G  G+ G  G PG+VG  G +G  G++G RGP G  G PGP 
Sbjct: 681 GASGPVGRDGAKGDRGEKGDMGDSGTVGVPGLVGNTGIRGERGEKGDRGPTGPRGEPGPI 740

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG----- 227
           G+PG  G  GP   MG+P      G  G PG  G+ GI G  G  G PG  G  G     
Sbjct: 741 GVPGQRGADGP---MGHP------GPQGRPGNKGILGIRGYQGDKGTPGDQGPQGIPGDP 791

Query: 228 -------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                    G  G  G  GE G  GPRG  G  GI GV
Sbjct: 792 GIPGQPGPPGSVGMKGVKGEMGPRGPRGEAGNMGIKGV 829



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 78/177 (44%), Gaps = 36/177 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
           PG  GP G  GE   KG+ G  G+RG  GA G VGP G  G PG  G  GP         
Sbjct: 599 PGAPGPFGPSGE---KGQRGQSGKRGPMGAEGRVGPEGSPGTPGKPGDPGPAGEPGHIGP 655

Query: 163 ---------------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                                 GD G  GP G  G +G RG KGDMG  G +G+    GL
Sbjct: 656 PGPPGERGAPGQMGPPGPPGRAGDKGASGPVGRDGAKGDRGEKGDMGDSGTVGV---PGL 712

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G+ G  G  G  G  G  G PG  G+PG  G +G  G  GP+G  G  GI G+
Sbjct: 713 VGNTGIRGERGEKGDRGPTGPRGEPGPIGVPGQRGADGPMGHPGPQGRPGNKGILGI 769



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 93/210 (44%), Gaps = 60/210 (28%)

Query: 112 PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGD 156
           PGLQGP G KG+ G    KGE+G  G RG++GAPG  G PG QG             PGD
Sbjct: 344 PGLQGPEGPKGQPGLPGPKGEVGFPGLRGDRGAPGPSGNPGKQGTHGPPGTIGNKGEPGD 403

Query: 157 EG------------------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            G                         +GP+G +G  G QG+PG EG +G +G+ G  G 
Sbjct: 404 RGHPGKPGMMGIRGFSGGEGEIGLVGAKGPEGSVGLQGAQGLPGPEGIKGRRGERGPLGP 463

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---------------------GLPGKDGI 231
           +G  G  G+ G  GL G PG  G  G+PG                       G  G+ G 
Sbjct: 464 VGEQGSRGIRGSAGLSGAPGHEGSRGLPGLRGPPGPEGPPGAIGPGGAPGITGPVGEKGA 523

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G +G KG TGPRG  G  G  G+PG 
Sbjct: 524 QGDIGPSGLKGPTGPRGPLGSIGRPGMPGA 553



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 94/233 (40%), Gaps = 67/233 (28%)

Query: 125  GAKGEMGVKGERGEKGAPGVV---------------------GPPGPQGIPGDEG----- 158
            G KGEMG +G RGE G  G+                      G PG QG  G EG     
Sbjct: 807  GVKGEMGPRGPRGEAGNMGIKGVQGPPGPKGHPGLSGQQGDRGQPGVQGDQGSEGLIGEP 866

Query: 159  ----------------------KRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYP 190
                                   +G  GD G  GP       G+PG  G +G +GD G P
Sbjct: 867  GPQGPPGENGRPGPPGPAGQTGPKGEAGDPGLEGPAGSDGMAGLPGPAGDKGERGDPGLP 926

Query: 191  GRIGLDGRD------GLPGEPGLDGIP---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G +G  G D      G PG+ G  G P   G+ G  G PG  GLPG+ G+PG  G +G+ 
Sbjct: 927  GTVGPIGPDGDQGPSGAPGKIGPTGPPGNVGKPGEMGPPGNAGLPGRTGLPGPPGKDGQV 986

Query: 242  GMTGPRGNRGKSGINGVP---GTPAICAYKRESCSLLPNSETSQLLIPPTIVG 291
            G  GPRG  G  G +G P   G P     K    S  P   T  +  PP ++G
Sbjct: 987  GKQGPRGEEGPRGPDGNPGIQGPPGASGVKGPPGSRGPVGPTG-MRGPPGLIG 1038



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 93/223 (41%), Gaps = 66/223 (29%)

Query: 104 NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---------------RGEKGAPGVVGPP 148
            +  +  P GL+GP G +G +G+ G  G+ G                RG  G+ G  G P
Sbjct: 522 GAQGDIGPSGLKGPTGPRGPLGSIGRPGMPGAAGIPGPHGPQGGQGLRGLPGSVGKTGDP 581

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEP 205
           G  G  G  G RGP+G+ G PGP G  G++G+R   G +G MG  GR+G +G  G PG+P
Sbjct: 582 GAVGSKGPRGDRGPRGEPGAPGPFGPSGEKGQRGQSGKRGPMGAEGRVGPEGSPGTPGKP 641

Query: 206 ---------------------------------------GLDGIPGRNGMDGIPGKD--- 223
                                                  G  G  GR+G  G  G+    
Sbjct: 642 GDPGPAGEPGHIGPPGPPGERGAPGQMGPPGPPGRAGDKGASGPVGRDGAKGDRGEKGDM 701

Query: 224 ------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                 G+PG  G  G  G  GEKG  GP G RG+ G  GVPG
Sbjct: 702 GDSGTVGVPGLVGNTGIRGERGEKGDRGPTGPRGEPGPIGVPG 744



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 9/100 (9%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG   ++    PPG +GP+G  G  G  G +G  G  G++G+ G  G PGP G    E
Sbjct: 1005 GIQGPPGASGVKGPPGSRGPVGPTGMRGPPGLIGQPGPPGKQGSQGRPGKPGPDGF---E 1061

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            GKRGP G++G P   G+PG+   +GP GD G PG  G  G
Sbjct: 1062 GKRGPPGEIGAP---GVPGN---KGPVGDEGEPGSRGASG 1095



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 79/178 (44%), Gaps = 42/178 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------------------ 148
           G +G  G++G +GA+G +G +G  G  G PG  GP                         
Sbjct: 612 GQRGQSGKRGPMGAEGRVGPEGSPGTPGKPGDPGPAGEPGHIGPPGPPGERGAPGQMGPP 671

Query: 149 ------------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                       GP G  G +G RG KGDMG  G  G+PG  G  G +G+ G  G  G  
Sbjct: 672 GPPGRAGDKGASGPVGRDGAKGDRGEKGDMGDSGTVGVPGLVGNTGIRGERGEKGDRGPT 731

Query: 197 GRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           G     GEPG  G+PG+ G DG    PG  G PG  GI G  G  G+KG  G +G +G
Sbjct: 732 GPR---GEPGPIGVPGQRGADGPMGHPGPQGRPGNKGILGIRGYQGDKGTPGDQGPQG 786



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 84/198 (42%), Gaps = 51/198 (25%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---------------- 154
           P G++G  G++G +G  GE G +G RG     G+ G PG +G                  
Sbjct: 448 PEGIKGRRGERGPLGPVGEQGSRGIRGSA---GLSGAPGHEGSRGLPGLRGPPGPEGPPG 504

Query: 155 -----------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---- 199
                      G  G++G +GD+   GP G+ G  G RGP G +G PG  G  G      
Sbjct: 505 AIGPGGAPGITGPVGEKGAQGDI---GPSGLKGPTGPRGPLGSIGRPGMPGAAGIPGPHG 561

Query: 200 --------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------TG 245
                   GLPG  G  G PG  G  G  G  G  G+ G PG  G +GEKG        G
Sbjct: 562 PQGGQGLRGLPGSVGKTGDPGAVGSKGPRGDRGPRGEPGAPGPFGPSGEKGQRGQSGKRG 621

Query: 246 PRGNRGKSGINGVPGTPA 263
           P G  G+ G  G PGTP 
Sbjct: 622 PMGAEGRVGPEGSPGTPG 639



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 89/238 (37%), Gaps = 90/238 (37%)

Query: 113 GLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP--------------- 154
           G  GP+G    +G  G KG +G++G +G+KG PG  GP   QGIP               
Sbjct: 747 GADGPMGHPGPQGRPGNKGILGIRGYQGDKGTPGDQGP---QGIPGDPGIPGQPGPPGSV 803

Query: 155 ------GDEGKRGPK---------------------------GDMGYPGPQGIPGDEG-- 179
                 G+ G RGP+                           GD G PG QG  G EG  
Sbjct: 804 GMKGVKGEMGPRGPRGEAGNMGIKGVQGPPGPKGHPGLSGQQGDRGQPGVQGDQGSEGLI 863

Query: 180 -------------------------KRGPKGDMGYPGRIGLDGRDGLP---------GEP 205
                                     +G  GD G  G  G DG  GLP         G+P
Sbjct: 864 GEPGPQGPPGENGRPGPPGPAGQTGPKGEAGDPGLEGPAGSDGMAGLPGPAGDKGERGDP 923

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           GL G  G  G DG  G  G PGK G  G  G  G+ G  GP GN G  G  G+PG P 
Sbjct: 924 GLPGTVGPIGPDGDQGPSGAPGKIGPTGPPGNVGKPGEMGPPGNAGLPGRTGLPGPPG 981



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 63/148 (42%), Gaps = 22/148 (14%)

Query: 72   REKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGP---IGQKGEIGAKG 128
            R +E       NP +     +      ++G   S     P G++GP   IGQ G  G +G
Sbjct: 992  RGEEGPRGPDGNPGIQGPPGA----SGVKGPPGSRGPVGPTGMRGPPGLIGQPGPPGKQG 1047

Query: 129  EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD----------- 177
              G  G+ G  G  G  GPPG  G PG  G +GP GD G PG +G  G+           
Sbjct: 1048 SQGRPGKPGPDGFEGKRGPPGEIGAPGVPGNKGPVGDEGEPGSRGASGNMGLTGPPGDGG 1107

Query: 178  ----EGKRGPKGDMGYPGRIGLDGRDGL 201
                 G  G +G  G PG +GL G  GL
Sbjct: 1108 PPGLPGIPGSRGTQGPPGEVGLKGEAGL 1135


>gi|432862586|ref|XP_004069928.1| PREDICTED: collagen alpha-1(II) chain-like [Oryzias latipes]
          Length = 494

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 94/170 (55%), Gaps = 6/170 (3%)

Query: 101 GFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
           G C +     P G    QGP G+ G  GAKG++G +G++G+ G+ G  G  GP+G+ G  
Sbjct: 11  GMCGTPGPQGPQGEIGAQGPKGKMGLKGAKGDIGPQGQKGQMGSKGSKGEMGPKGLKGQT 70

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G +GPKG+ G  GP G   ++G +GPKGD+G  G  G  G+ G  GE G  G+ G  G+ 
Sbjct: 71  GPQGPKGETGPQGPPGPSENKGAQGPKGDIGPKGAKGAKGQQGPKGEMGEKGLKGLPGLS 130

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPGTPAI 264
           G PG  G  G  G  G  G  G+KG T   GP+GN G  G  G PG P +
Sbjct: 131 GTPGAKGDMGPQGPTGDVGQQGQKGDTGPQGPKGNEGSQGPTGTPGNPGL 180



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 90/173 (52%), Gaps = 27/173 (15%)

Query: 116 GPIGQKGEIGAKG---EMGVKGERGE------KGAPGVVGPPGP---------------Q 151
           GP GQKG++G+KG   EMG KG +G+      KG  G  GPPGP               +
Sbjct: 44  GPQGQKGQMGSKGSKGEMGPKGLKGQTGPQGPKGETGPQGPPGPSENKGAQGPKGDIGPK 103

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLD 208
           G  G +G++GPKG+MG  G +G+PG  G  G KGDMG     G +G  G+ G  G  G  
Sbjct: 104 GAKGAKGQQGPKGEMGEKGLKGLPGLSGTPGAKGDMGPQGPTGDVGQQGQKGDTGPQGPK 163

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G  G PG  GL G  G PG  G  G +G+ G +G +G+ G  G  GT
Sbjct: 164 GNEGSQGPTGTPGNPGLKGDLGPPGPTGDMGLQGLKGDKGAKGQKGEIGEKGT 216



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 77/140 (55%), Gaps = 6/140 (4%)

Query: 113 GLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G QGP   IG KG  GAKG+ G KGE GEKG  G+   PG  G PG +G  GP+G  G  
Sbjct: 92  GAQGPKGDIGPKGAKGAKGQQGPKGEMGEKGLKGL---PGLSGTPGAKGDMGPQGPTGDV 148

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G QG  GD G +GPKG+ G  G  G  G  GL G+ G  G  G  G+ G+ G  G  G+ 
Sbjct: 149 GQQGQKGDTGPQGPKGNEGSQGPTGTPGNPGLKGDLGPPGPTGDMGLQGLKGDKGAKGQK 208

Query: 230 GIPGTNGTNGEKGMTGPRGN 249
           G  G  GT G+ G  G +G+
Sbjct: 209 GEIGEKGTKGDLGPMGVKGS 228



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 73/152 (48%), Gaps = 6/152 (3%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
           G +G  G PG+ G PGPQG  G+ G +GPKG MG    +G  GD G +G KG MG  G  
Sbjct: 2   GPKGSNGIPGMCGTPGPQGPQGEIGAQGPKGKMGL---KGAKGDIGPQGQKGQMGSKGSK 58

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPG---KDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G  GL G+ G  G  G  G  G PG     G  G  G  G  G  G KG  GP+G  
Sbjct: 59  GEMGPKGLKGQTGPQGPKGETGPQGPPGPSENKGAQGPKGDIGPKGAKGAKGQQGPKGEM 118

Query: 251 GKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
           G+ G+ G+PG       K +     P  +  Q
Sbjct: 119 GEKGLKGLPGLSGTPGAKGDMGPQGPTGDVGQ 150



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 75/181 (41%), Positives = 87/181 (48%), Gaps = 27/181 (14%)

Query: 104 NSTKEYCPPGLQG---PIGQKGEIGA---------KGEMGVKGERGEKGAPGVVGPPGP- 150
            S  E  P GL+G   P G KGE G          KG  G KG+ G KGA G  G  GP 
Sbjct: 56  GSKGEMGPKGLKGQTGPQGPKGETGPQGPPGPSENKGAQGPKGDIGPKGAKGAKGQQGPK 115

Query: 151 --------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                   +G+PG  G  G KGDM   GPQG  GD G++G KGD G  G  G +G  G  
Sbjct: 116 GEMGEKGLKGLPGLSGTPGAKGDM---GPQGPTGDVGQQGQKGDTGPQGPKGNEGSQGPT 172

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           G P   G PG  G  G PG  G  G  G+ G  G  G+KG  G +G +G  G  GV G+ 
Sbjct: 173 GTP---GNPGLKGDLGPPGPTGDMGLQGLKGDKGAKGQKGEIGEKGTKGDLGPMGVKGSA 229

Query: 263 A 263
           A
Sbjct: 230 A 230


>gi|348538415|ref|XP_003456687.1| PREDICTED: collagen alpha-1(XI) chain-like isoform 1 [Oreochromis
           niloticus]
          Length = 1807

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 87/167 (52%), Gaps = 9/167 (5%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G         P G QGPIG  G  G KG  GV+G +G KG  G  G P   G  GD G 
Sbjct: 742 EGPAGEKGAQGPSGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFP---GFKGDMGI 798

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------ 213
           +G +G++G  GP+G  G EG +G  G  G  G IGL G  G  G PGL G PGR      
Sbjct: 799 KGDRGEIGLIGPRGEDGPEGPKGRAGPPGESGPIGLAGEKGKLGVPGLPGYPGRQGPKGS 858

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G  G PG +G  G  G  G +G  G++G TGPRG RG  G  G PG
Sbjct: 859 SGFPGFPGANGEKGARGTAGKSGPRGQRGPTGPRGARGARGPTGKPG 905



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 85/171 (49%), Gaps = 21/171 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G  G  G +G  G KG +G  G  G +G PGP+G+ G +G RG KG  G  G 
Sbjct: 727 PGLPGADGPPGHPGKEGPAGEKGAQGPSGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE 786

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---------PGEPGLDGIPGRNGMDGIPGK 222
            G PG +G  G KGD G  G IG  G DG          PGE G  G+ G  G  G+PG 
Sbjct: 787 DGFPGFKGDMGIKGDRGEIGLIGPRGEDGPEGPKGRAGPPGESGPIGLAGEKGKLGVPGL 846

Query: 223 DGLPGKD------GIPGTNGTNGEKGM------TGPRGNRGKSGINGVPGT 261
            G PG+       G PG  G NGEKG       +GPRG RG +G  G  G 
Sbjct: 847 PGYPGRQGPKGSSGFPGFPGANGEKGARGTAGKSGPRGQRGPTGPRGARGA 897



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 60/132 (45%), Gaps = 12/132 (9%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GP G  G+PG  G  GP G  G  GP G  G +G  GP+G +GYPG  G+ G        
Sbjct: 719 GPQGRSGLPGLPGADGPPGHPGKEGPAGEKGAQGPSGPQGPIGYPGPRGVKG-------- 770

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPGTP 262
             DG+ G  G  G  G+DG PG  G  G  G  GE G+ GPRG     G  G  G PG  
Sbjct: 771 -ADGVRGLKGSKGEKGEDGFPGFKGDMGIKGDRGEIGLIGPRGEDGPEGPKGRAGPPGES 829

Query: 263 AICAYKRESCSL 274
                  E   L
Sbjct: 830 GPIGLAGEKGKL 841



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 91/217 (41%), Gaps = 75/217 (34%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  G++G  GA G  G+ GE G KG  G  G PG   +PG++G R          
Sbjct: 573 PPGQPGKTGKRGRAGADGSRGMPGESGSKGDRGFDGLPG---LPGEKGHRGDPGPMGPPG 629

Query: 161 -----GPKGDMGYPGPQGIPGD------------------------EGKRGPKGDM---- 187
                G +G+ G  GP+G+ G+                        +G +GPKG+M    
Sbjct: 630 APGEDGQRGEDGEIGPRGLAGESGPRGLLGPRGPPGPPGSPGVAGVDGPQGPKGNMGPQG 689

Query: 188 --------GYPG---------------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                   G PG                 G  GR GLPG PG DG PG       PGK+G
Sbjct: 690 EPGPPGQQGIPGTQGLPGPQGPIGPPGEKGPQGRSGLPGLPGADGPPGH------PGKEG 743

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G+ G  G +G  G  G  GPRG +G  G+ G+ G+
Sbjct: 744 PAGEKGAQGPSGPQGPIGYPGPRGVKGADGVRGLKGS 780



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 63/134 (47%), Gaps = 9/134 (6%)

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPG 212
           ++G +G  G  G PG  G PG  GK GP G+ G  G  G  G  G PG  G+   DG+ G
Sbjct: 717 EKGPQGRSGLPGLPGADGPPGHPGKEGPAGEKGAQGPSGPQGPIGYPGPRGVKGADGVRG 776

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
             G  G  G+DG PG  G  G  G  GE G+ GPRG  G  G  G  G P       ES 
Sbjct: 777 LKGSKGEKGEDGFPGFKGDMGIKGDRGEIGLIGPRGEDGPEGPKGRAGPPG------ESG 830

Query: 273 SLLPNSETSQLLIP 286
            +    E  +L +P
Sbjct: 831 PIGLAGEKGKLGVP 844



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 62/120 (51%), Gaps = 12/120 (10%)

Query: 146 GPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           GPPGP G+ G  G  GP      KG+ G PGPQG  G +G  G  G  G  GR G DG  
Sbjct: 533 GPPGPMGLTGRSGPVGPPGISGLKGESGDPGPQGPRGTQGPPGQPGKTGKRGRAGADGSR 592

Query: 200 GLPGEPG------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G+PGE G       DG+PG  G  G  G  G  G  G PG +G  GE G  GPRG  G+S
Sbjct: 593 GMPGESGSKGDRGFDGLPGLPGEKGHRGDPGPMGPPGAPGEDGQRGEDGEIGPRGLAGES 652



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 83/232 (35%), Gaps = 84/232 (36%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP+G  G  G  G  G+ G +GE G PG  GP G QG PG  GK G +G  G  G +
Sbjct: 533 GPPGPMGLTGRSGPVGPPGISGLKGESGDPGPQGPRGTQGPPGQPGKTGKRGRAGADGSR 592

Query: 173 GIPGDEGKRGPKGDMGYPGRIGL------------------DGRDGLPGEPGLDGIPGRN 214
           G+PG+ G +G +G  G PG  G                   DG+ G  GE G  G+ G +
Sbjct: 593 GMPGESGSKGDRGFDGLPGLPGEKGHRGDPGPMGPPGAPGEDGQRGEDGEIGPRGLAGES 652

Query: 215 ---------------------GMDG---------------------IPGKD--------- 223
                                G+DG                     IPG           
Sbjct: 653 GPRGLLGPRGPPGPPGSPGVAGVDGPQGPKGNMGPQGEPGPPGQQGIPGTQGLPGPQGPI 712

Query: 224 ---------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                          GLPG DG PG  G  G  G  G +G  G  G  G PG
Sbjct: 713 GPPGEKGPQGRSGLPGLPGADGPPGHPGKEGPAGEKGAQGPSGPQGPIGYPG 764



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  GPIG  GE   KG++GV G  G  G  G  G  G  G PG  G++G +G  G  G
Sbjct: 825 PPGESGPIGLAGE---KGKLGVPGLPGYPGRQGPKGSSGFPGFPGANGEKGARGTAGKSG 881

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           P+G  G  G RG +G  G  G+ G  G
Sbjct: 882 PRGQRGPTGPRGARGARGPTGKPGPKG 908



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 65/157 (41%), Gaps = 27/157 (17%)

Query: 139 KGAPGVVGPPG------------PQGIP-------------GDEGKRGPKGDMGYPGPQG 173
           +G PG  G PG              G+P             G +G++GP         Q 
Sbjct: 463 QGPPGTTGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRFGGDGEKGPVVSAQEAQAQA 522

Query: 174 IPGDE--GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           I        RGP G MG  GR G  G  G+ G  G  G PG  G  G  G  G PGK G 
Sbjct: 523 ILSQARLAMRGPPGPMGLTGRSGPVGPPGISGLKGESGDPGPQGPRGTQGPPGQPGKTGK 582

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G +G +GM G  G++G  G +G+PG P    ++
Sbjct: 583 RGRAGADGSRGMPGESGSKGDRGFDGLPGLPGEKGHR 619



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 41/90 (45%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G+ G IG  GE G  G  G  G PG  GP G  G PG  G  G KG  G  G
Sbjct: 819 PKGRAGPPGESGPIGLAGEKGKLGVPGLPGYPGRQGPKGSSGFPGFPGANGEKGARGTAG 878

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
             G  G  G  GP+G  G  G  G  G  G
Sbjct: 879 KSGPRGQRGPTGPRGARGARGPTGKPGPKG 908



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 15/86 (17%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG--------- 161
           PPG  G  G+ G +G  G  G+KGE G+ G  G  G  GP G PG  GKRG         
Sbjct: 534 PPGPMGLTGRSGPVGPPGISGLKGESGDPGPQGPRGTQGPPGQPGKTGKRGRAGADGSRG 593

Query: 162 ------PKGDMGYPGPQGIPGDEGKR 181
                  KGD G+ G  G+PG++G R
Sbjct: 594 MPGESGSKGDRGFDGLPGLPGEKGHR 619



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 9/56 (16%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            KG+ G KGE+G  G  G++GPPG      ++G+   KGD G PGPQG PG +G  G
Sbjct: 1447 KGDPGSKGEKGHPGLIGLIGPPG------EQGE---KGDRGLPGPQGSPGGKGDSG 1493



 Score = 40.0 bits (92), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 73/175 (41%), Gaps = 40/175 (22%)

Query: 134 GERGEKGAPGVV-------------------------GPPGPQGIPGDEGKRGPKGDM-- 166
           G++GEKG P V+                         GPPG  G PGD G  G  G    
Sbjct: 427 GQKGEKGEPAVIEPGMLIEGPPGTPGPAGLPGPAGLQGPPGTTGDPGDRGPPGRPGLPGA 486

Query: 167 -GYPGPQG----IP---GDEGKRGP--KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G PGP G    +P   G +G++GP           I    R  + G PG  G+ GR+G 
Sbjct: 487 DGLPGPPGTMLMLPFRFGGDGEKGPVVSAQEAQAQAILSQARLAMRGPPGPMGLTGRSGP 546

Query: 217 DGIPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G PG  GL G+ G PG     GT G  G  G  G RG++G +G  G P     K
Sbjct: 547 VGPPGISGLKGESGDPGPQGPRGTQGPPGQPGKTGKRGRAGADGSRGMPGESGSK 601


>gi|344264489|ref|XP_003404324.1| PREDICTED: collagen alpha-1(X) chain-like [Loxodonta africana]
          Length = 680

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 88/160 (55%), Gaps = 20/160 (12%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-----IPGDEGKRGPKGDMGYPG-- 170
           IG+ G  GA G+ G+ G +G  GAPG+ G PG  G     +PG +G+RGP G  G PG  
Sbjct: 263 IGKPGPTGAPGQPGIPGAKGHPGAPGIAGAPGAPGFGKPGLPGLKGQRGPVGLPGSPGAK 322

Query: 171 ----PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIP 220
               P G+PG+ G  GP G+MG  G  G+ G  G+PG        G  G PG  G  G P
Sbjct: 323 GEQGPAGLPGEPGLTGPPGNMGPQGPKGIPGNHGIPGAKGETGPAGPAGYPGAKGERGPP 382

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G DG PG  G PG NG  G+ G+ GP+G+   SG+ G PG
Sbjct: 383 GLDGKPGYAGEPGLNGPKGDPGLPGPKGD---SGVRGSPG 419



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 84/155 (54%), Gaps = 21/155 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ+G +G  G  G KGE+G            P G+PG+ G  GP G+MG  GP
Sbjct: 301 PGLPGLKGQRGPVGLPGSPGAKGEQG------------PAGLPGEPGLTGPPGNMGPQGP 348

Query: 172 QGIPGD------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +GIPG+      +G+ GP G  GYPG  G  G  GL G+PG  G PG NG  G P   GL
Sbjct: 349 KGIPGNHGIPGAKGETGPAGPAGYPGAKGERGPPGLDGKPGYAGEPGLNGPKGDP---GL 405

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G  G  G+ G  G  GP G +G  G+NG PG
Sbjct: 406 PGPKGDSGVRGSPGLLGPMGPAGAKGVPGLNGEPG 440



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/144 (47%), Positives = 83/144 (57%), Gaps = 6/144 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GP+G  G  GAKGE G   + GE G  G PG +GP GP+GIPG+ G  G KG+ G  
Sbjct: 308 GQRGPVGLPGSPGAKGEQGPAGLPGEPGLTGPPGNMGPQGPKGIPGNHGIPGAKGETGPA 367

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---KDGLP 226
           GP G PG +G+RGP G  G PG  G  G +G  G+PGL G  G +G+ G PG     G  
Sbjct: 368 GPAGYPGAKGERGPPGLDGKPGYAGEPGLNGPKGDPGLPGPKGDSGVRGSPGLLGPMGPA 427

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G+PG NG  G +G  G  G R
Sbjct: 428 GAKGVPGLNGEPGPRGAPGIPGTR 451



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 89/211 (42%), Gaps = 53/211 (25%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG--IPGDEGKRG--------------- 161
           GQ+G  GA G  G  GE+G  G PGV G  G  G   PG  G+RG               
Sbjct: 159 GQQGPTGAPGPRGFPGEKGTPGVPGVSGQKGETGYGAPGRPGERGLPGAQGPMGPPGPPG 218

Query: 162 --PKGDMGYPGPQGIPGDEG-----------------------KRGPKGDMGYPGRIGLD 196
              +G+ G+PG  GI GD G                         G  G  G PG+ G+ 
Sbjct: 219 VGKRGENGFPGQPGIKGDRGFPGERGPTGPPGPQGPPGEQGLEGIGKPGPTGAPGQPGIP 278

Query: 197 GRDGLPGEPGLDGIPGRNGMD--GIPGKDGLPGKDGIPGTNGTNGEKG---------MTG 245
           G  G PG PG+ G PG  G    G+PG  G  G  G+PG+ G  GE+G         +TG
Sbjct: 279 GAKGHPGAPGIAGAPGAPGFGKPGLPGLKGQRGPVGLPGSPGAKGEQGPAGLPGEPGLTG 338

Query: 246 PRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           P GN G  G  G+PG   I   K E+    P
Sbjct: 339 PPGNMGPQGPKGIPGNHGIPGAKGETGPAGP 369



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 59/110 (53%), Gaps = 12/110 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G KGE G  G  G  G +GE+G PG+ G PG     G+ G  GPKGD G PGP
Sbjct: 352 PGNHGIPGAKGETGPAGPAGYPGAKGERGPPGLDGKPG---YAGEPGLNGPKGDPGLPGP 408

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           +   GD G R      G PG +G  G  G  G PGL+G PG  G  GIPG
Sbjct: 409 K---GDSGVR------GSPGLLGPMGPAGAKGVPGLNGEPGPRGAPGIPG 449



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 40/81 (49%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G+  +  E  PPGL G  G  GE G  G  G  G  G KG  GV G PG  G  G  G +
Sbjct: 371 GYPGAKGERGPPGLDGKPGYAGEPGLNGPKGDPGLPGPKGDSGVRGSPGLLGPMGPAGAK 430

Query: 161 GPKGDMGYPGPQGIPGDEGKR 181
           G  G  G PGP+G PG  G R
Sbjct: 431 GVPGLNGEPGPRGAPGIPGTR 451



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 79/235 (33%), Gaps = 112/235 (47%)

Query: 144 VVGPPGPQGIPGDEGKR---GPKGDM---------------------------------- 166
           V G PG  G+PG  G+R   GPKGD+                                  
Sbjct: 104 VTGKPGVPGLPGKPGERGPYGPKGDIGPAGLPGPRGLPGPPGIPGPAGISVSGKPGQQGP 163

Query: 167 -GYPGPQGIPGDEGK------RGPKGDMGY-----PGRIGLD-----------------G 197
            G PGP+G PG++G        G KG+ GY     PG  GL                  G
Sbjct: 164 TGAPGPRGFPGEKGTPGVPGVSGQKGETGYGAPGRPGERGLPGAQGPMGPPGPPGVGKRG 223

Query: 198 RDGLPGEPGLD-----------------------------------------GIPGRNGM 216
            +G PG+PG+                                          GIPG  G 
Sbjct: 224 ENGFPGQPGIKGDRGFPGERGPTGPPGPQGPPGEQGLEGIGKPGPTGAPGQPGIPGAKGH 283

Query: 217 DGIPGKDGLP-----GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G PG  G P     GK G+PG  G  G  G+ G  G +G+ G  G+PG P +  
Sbjct: 284 PGAPGIAGAPGAPGFGKPGLPGLKGQRGPVGLPGSPGAKGEQGPAGLPGEPGLTG 338


>gi|327283919|ref|XP_003226687.1| PREDICTED: collagen alpha-1(XXVII) chain-like [Anolis carolinensis]
          Length = 1783

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 91/166 (54%), Gaps = 12/166 (7%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMG 167
            P GL G +G +G  G  G  G  G  G++G  G +G  GP+G PG +G  GP   KG +G
Sbjct: 1006 PDGLVGELGPQGAKGLLGNTGKDGLHGQQGKIGEIGEAGPRGFPGIQGPSGPQGTKGPLG 1065

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------GIPGRNGMDGIPG 221
             PGPQG    +G  GP G++G+ G  G  GR GLPGEPG+       G+PG  G+ G  G
Sbjct: 1066 DPGPQGA---QGPPGPLGEIGHKGPPGSVGRRGLPGEPGMKGDIGPLGVPGEQGLIGQRG 1122

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            + GL G +G  G +G  G+KG  GP G RG+ G  G+ G      Y
Sbjct: 1123 EPGLEGDNGPAGPDGLKGDKGEPGPEGERGEKGQEGIKGKEGPPGY 1168



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 93/168 (55%), Gaps = 9/168 (5%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG- 158
            QG      +  P G QGP G  GEIG KG  G  G RG  G PG+ G  GP G+PG++G 
Sbjct: 1058 QGTKGPLGDPGPQGAQGPPGPLGEIGHKGPPGSVGRRGLPGEPGMKGDIGPLGVPGEQGL 1117

Query: 159  -----KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                 + G +GD G  GP G+ GD+G+ GP+G+ G  G+ G+ G++G PG  G+ G+   
Sbjct: 1118 IGQRGEPGLEGDNGPAGPDGLKGDKGEPGPEGERGEKGQEGIKGKEGPPGYLGVTGV--- 1174

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G +G PG+ G  GK G  G+ G  G+ G TGP G  G  G  G  G+
Sbjct: 1175 RGPEGKPGRQGEKGKTGPKGSKGQQGQLGETGPPGKTGSKGTQGPKGS 1222



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 95/177 (53%), Gaps = 18/177 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  GQKG +G  G  G +GE+G  G PG  G PG QG+PG  G+ GPKG  GY   
Sbjct: 638 PGQSGRKGQKGYLGPAGHPGDQGEQGPDGNPGAKGYPGRQGLPGPVGEPGPKGSRGYIGL 697

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGK 222
           PG  G+PG +G+R   G  G PG+ G  GR G PG+      PG+DG PG  G+ G PG 
Sbjct: 698 PGLFGLPGADGER---GIPGVPGKRGKMGRPGFPGDFGERGPPGIDGNPGDVGVLGPPGV 754

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI------NGVPGTPAICAYKRESCS 273
            GL G  G  G  G  G KG+ G  GN G+ G+       G+PG P    ++ +  S
Sbjct: 755 HGLIGDMGAIGPMGFPGPKGLKGLMGNPGEHGLKGDKGEQGMPGIPGDAGFQGDKGS 811



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 90/168 (53%), Gaps = 21/168 (12%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGYPGPQGIP 175
           GQKG++G  G  G  G+ G KG  G +GP    G PGD+G++GP G+    GYPG QG+P
Sbjct: 624 GQKGDVGLPGLTGFPGQSGRKGQKGYLGP---AGHPGDQGEQGPDGNPGAKGYPGRQGLP 680

Query: 176 GDEGKRGPKGDMGY---PGRIGL---DGRDGLPGEP------GLDGIPGRNGMDGIPGKD 223
           G  G+ GPKG  GY   PG  GL   DG  G+PG P      G  G PG  G  G PG D
Sbjct: 681 GPVGEPGPKGSRGYIGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPGDFGERGPPGID 740

Query: 224 GLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G PG  G+   PG +G  G+ G  GP G  G  G+ G+ G P     K
Sbjct: 741 GNPGDVGVLGPPGVHGLIGDMGAIGPMGFPGPKGLKGLMGNPGEHGLK 788



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 93/175 (53%), Gaps = 12/175 (6%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            +GF        P G +GP+G  G  GA+G  G  GE G KG PG VG    +G+PG+ G 
Sbjct: 1046 RGFPGIQGPSGPQGTKGPLGDPGPQGAQGPPGPLGEIGHKGPPGSVGR---RGLPGEPGM 1102

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G  G +G PG QG+ G  G+ G +GD G  G  GL G     GEPG +G  G  G +GI
Sbjct: 1103 KGDIGPLGVPGEQGLIGQRGEPGLEGDNGPAGPDGLKGDK---GEPGPEGERGEKGQEGI 1159

Query: 220  PGKDGLPGKDGIPGTN------GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             GK+G PG  G+ G        G  GEKG TGP+G++G+ G  G  G P     K
Sbjct: 1160 KGKEGPPGYLGVTGVRGPEGKPGRQGEKGKTGPKGSKGQQGQLGETGPPGKTGSK 1214



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 79/153 (51%), Gaps = 9/153 (5%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKG--- 164
           P G  GP G +G IG  G  G+ G  GE+G PGV G  G  G    PGD G+RGP G   
Sbjct: 682 PVGEPGPKGSRGYIGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPGDFGERGPPGIDG 741

Query: 165 ---DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
              D+G  GP G+ G  G  G  G MG+PG  GL G  G PGE GL G  G  GM GIPG
Sbjct: 742 NPGDVGVLGPPGVHGLIGDMGAIGPMGFPGPKGLKGLMGNPGEHGLKGDKGEQGMPGIPG 801

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G  G  G  G +G  GP G+ G  G
Sbjct: 802 DAGFQGDKGSQGLPGMPGARGKPGPPGSAGDKG 834



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/139 (46%), Positives = 77/139 (55%), Gaps = 6/139 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G KG+ G+   +   G  G VG PG  G PG  G++G KG   Y GP G PGD+G++GP 
Sbjct: 609 GQKGDPGLSPGKARNGQKGDVGLPGLTGFPGQSGRKGQKG---YLGPAGHPGDQGEQGPD 665

Query: 185 GD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G+    GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G  G  
Sbjct: 666 GNPGAKGYPGRQGLPGPVGEPGPKGSRGYIGLPGLFGLPGADGERGIPGVPGKRGKMGRP 725

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G  G  G RG  GI+G PG
Sbjct: 726 GFPGDFGERGPPGIDGNPG 744



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 83/151 (54%), Gaps = 15/151 (9%)

Query: 113  GLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            GL G  G KG+IG     GE G+ G+RGE G  G  GP GP G+         KGD G P
Sbjct: 1095 GLPGEPGMKGDIGPLGVPGEQGLIGQRGEPGLEGDNGPAGPDGL---------KGDKGEP 1145

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP+G  G++G+ G KG  G PG +G+ G  G  G+PG  G  G+ G  G  G+ G  G+ 
Sbjct: 1146 GPEGERGEKGQEGIKGKEGPPGYLGVTGVRGPEGKPGRQGEKGKTGPKGSKGQQGQLGET 1205

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG  G+   KG  GP+G+RG  G  G PG
Sbjct: 1206 GPPGKTGS---KGTQGPKGSRGTLGAMGAPG 1233



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 102/217 (47%), Gaps = 58/217 (26%)

Query: 113  GLQGPIGQK---GEIGAKGEMGVKGERG---------------------EKGAPG----V 144
            G QGP G +   G +GA G MGV+GE G                     EKG  G    +
Sbjct: 1215 GTQGPKGSRGTLGAMGAPGRMGVQGETGLKGYQGHSGPPGPIGPPGPKGEKGEQGDDGKI 1274

Query: 145  VGP---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------RGP 183
             GP   PG +G  GD G RG  GD GYPG +G+ G+ GK                  +G 
Sbjct: 1275 EGPPGLPGDRGPAGDRGPRGESGDPGYPGQEGLDGERGKPGQQGLPGHPGPPGQPGLKGS 1334

Query: 184  KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK-- 241
            KG +G  G+ G  G  G  G PGL G+PG  G+ G  G++G PG DGI G +G+ G+K  
Sbjct: 1335 KGSIGQKGKQGRKGATGNRGLPGLVGLPGPRGVIGRQGQEGAPGPDGIHGKDGSAGQKGE 1394

Query: 242  -------GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
                   G+TG  G RG  G+ G+PG      +K E+
Sbjct: 1395 QGEDGEEGVTGLSGKRGNPGVLGLPGAQGPPGFKGET 1431



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 94/205 (45%), Gaps = 51/205 (24%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------P 154
           GF     E  PPG+ G     G++G  G  GV G  G+ GA G +G PGP+G+      P
Sbjct: 726 GFPGDFGERGPPGIDG---NPGDVGVLGPPGVHGLIGDMGAIGPMGFPGPKGLKGLMGNP 782

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---- 210
           G+ G +G KG+ G PG   IPGD G +G KG  G PG  G  G+ G PG  G  G     
Sbjct: 783 GEHGLKGDKGEQGMPG---IPGDAGFQGDKGSQGLPGMPGARGKPGPPGSAGDKGAVGIP 839

Query: 211 --------------PGRNGMDGIPGK------------------DGLPGKDGIPGTNGTN 238
                         PG+NG +GI GK                  +G  G  GIPG  G  
Sbjct: 840 GPPGPEGFPGDIGPPGQNGPEGIKGKPGARGAPGPPGRPGQEGDEGPVGPHGIPGAEGPL 899

Query: 239 GEKGM---TGPRGNRGKSGINGVPG 260
           G KG     GP G++G+ G +G PG
Sbjct: 900 GRKGFPGKPGPDGSKGEPGNSGRPG 924



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 86/185 (46%), Gaps = 36/185 (19%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGP 150
           I L  + G   +  E   PG+ G  G+ G  G  G+ G +G  G  G PG   V+GPPG 
Sbjct: 695 IGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPGDFGERGPPGIDGNPGDVGVLGPPGV 754

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGL 207
            G+ GD G  GP   MG+PGP+G+         KG MG PG  GL    G  G+PG PG 
Sbjct: 755 HGLIGDMGAIGP---MGFPGPKGL---------KGLMGNPGEHGLKGDKGEQGMPGIPGD 802

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---------------GPRGNRGK 252
            G  G  G  G+P   G+PG  G PG  G+ G+KG                 GP G  G 
Sbjct: 803 AGFQGDKGSQGLP---GMPGARGKPGPPGSAGDKGAVGIPGPPGPEGFPGDIGPPGQNGP 859

Query: 253 SGING 257
            GI G
Sbjct: 860 EGIKG 864



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 89/201 (44%), Gaps = 40/201 (19%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---GPP-------- 148
            QG      E    G  GP G  G  G KGE G +GERGEKG  G+    GPP        
Sbjct: 1115 QGLIGQRGEPGLEGDNGPAGPDGLKGDKGEPGPEGERGEKGQEGIKGKEGPPGYLGVTGV 1174

Query: 149  -GPQGIP---GDEGKRGPK------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
             GP+G P   G++GK GPK      G +G  GP G  G +G +GPKG  G  G +G  GR
Sbjct: 1175 RGPEGKPGRQGEKGKTGPKGSKGQQGQLGETGPPGKTGSKGTQGPKGSRGTLGAMGAPGR 1234

Query: 199  DGLPGEPGLDGI------------------PGRNGMDG-IPGKDGLPGKDGIPGTNGTNG 239
             G+ GE GL G                    G  G DG I G  GLPG  G  G  G  G
Sbjct: 1235 MGVQGETGLKGYQGHSGPPGPIGPPGPKGEKGEQGDDGKIEGPPGLPGDRGPAGDRGPRG 1294

Query: 240  EKGMTGPRGNRGKSGINGVPG 260
            E G  G  G  G  G  G PG
Sbjct: 1295 ESGDPGYPGQEGLDGERGKPG 1315



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 88/201 (43%), Gaps = 51/201 (25%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------ 151
            + G         P G  GP G KG +G  GE G+KG++GE+G PG+ G  G Q      
Sbjct: 753 GVHGLIGDMGAIGPMGFPGPKGLKGLMGNPGEHGLKGDKGEQGMPGIPGDAGFQGDKGSQ 812

Query: 152 ---GIPGDEGKRGPKG---------------------DMGYP---GPQGIPG-------- 176
              G+PG  GK GP G                     D+G P   GP+GI G        
Sbjct: 813 GLPGMPGARGKPGPPGSAGDKGAVGIPGPPGPEGFPGDIGPPGQNGPEGIKGKPGARGAP 872

Query: 177 -------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
                   EG  GP G  G PG  G  GR G PG+PG DG  G  G  G PGK    G+ 
Sbjct: 873 GPPGRPGQEGDEGPVGPHGIPGAEGPLGRKGFPGKPGPDGSKGEPGNSGRPGKL---GEL 929

Query: 230 GIPGTNGTNGEKGMTGPRGNR 250
           G+ G  G  GE G+ G +G+R
Sbjct: 930 GLMGFIGPVGEPGIVGEKGDR 950



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 82/190 (43%), Gaps = 51/190 (26%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G KG IG KG+ G KG  G +G PG+VG PGP+G+ G +G+ G       PGP GI G +
Sbjct: 1333 GSKGSIGQKGKQGRKGATGNRGLPGLVGLPGPRGVIGRQGQEG------APGPDGIHGKD 1386

Query: 179  GKRGPK---------------GDMGYPGRIGLDGRDGLP---GEPGLD------------ 208
            G  G K               G  G PG +GL G  G P   GE GL             
Sbjct: 1387 GSAGQKGEQGEDGEEGVTGLSGKRGNPGVLGLPGAQGPPGFKGETGLSGQVGPSGKRGPP 1446

Query: 209  ---------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                           G PG  G  G PG  GL G  G PG  G  G +G  GP+G  GK 
Sbjct: 1447 GEMGPPGARGDLGTKGQPGDFGESGFPGIAGLFGPKGPPGDLGFKGIQGPKGPQGLMGKE 1506

Query: 254  GINGVPGTPA 263
            G+ G  G P 
Sbjct: 1507 GVIGPLGIPG 1516



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 81/168 (48%), Gaps = 27/168 (16%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------------EGKRG 161
            ++GP G  G+ G  G+ G +GE G+ G PG  G  G +G PG              G +G
Sbjct: 1274 IEGPPGLPGDRGPAGDRGPRGESGDPGYPGQEGLDGERGKPGQQGLPGHPGPPGQPGLKG 1333

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------ 215
             KG +G  G QG  G  G RG  G +G PG  G+ GR G  G PG DGI G++G      
Sbjct: 1334 SKGSIGQKGKQGRKGATGNRGLPGLVGLPGPRGVIGRQGQEGAPGPDGIHGKDGSAGQKG 1393

Query: 216  ---------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                     + G+ GK G PG  G+PG  G  G KG TG  G  G SG
Sbjct: 1394 EQGEDGEEGVTGLSGKRGNPGVLGLPGAQGPPGFKGETGLSGQVGPSG 1441



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 98/219 (44%), Gaps = 52/219 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG------------------ERGEKGAPGVV----GPPGP 150
            G  G +G  G +G +GE G+KG                  E+GE+G  G +    G PG 
Sbjct: 1224 GTLGAMGAPGRMGVQGETGLKGYQGHSGPPGPIGPPGPKGEKGEQGDDGKIEGPPGLPGD 1283

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------RGPKGDMGYPGR 192
            +G  GD G RG  GD GYPG +G+ G+ GK                  +G KG +G  G+
Sbjct: 1284 RGPAGDRGPRGESGDPGYPGQEGLDGERGKPGQQGLPGHPGPPGQPGLKGSKGSIGQKGK 1343

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGM------------DGIPGKDGLPGKDGIPGTNGTNGE 240
             G  G  G  G PGL G+PG  G+            DGI GKDG  G+ G  G +G  G 
Sbjct: 1344 QGRKGATGNRGLPGLVGLPGPRGVIGRQGQEGAPGPDGIHGKDGSAGQKGEQGEDGEEGV 1403

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
             G++G RGN G  G+ G  G P        S  + P+ +
Sbjct: 1404 TGLSGKRGNPGVLGLPGAQGPPGFKGETGLSGQVGPSGK 1442



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 80/164 (48%), Gaps = 30/164 (18%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPPGPQG 152
            P G +GP G+ G+ G  G+ G+ GERG+                  KG+ G +G  G QG
Sbjct: 1286 PAGDRGPRGESGDPGYPGQEGLDGERGKPGQQGLPGHPGPPGQPGLKGSKGSIGQKGKQG 1345

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PG 206
              G  G RG  G +G PGP+G+ G +G+ G       PG  G+ G+DG  G+       G
Sbjct: 1346 RKGATGNRGLPGLVGLPGPRGVIGRQGQEG------APGPDGIHGKDGSAGQKGEQGEDG 1399

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
             +G+ G +G  G PG  GLPG  G PG  G  G  G  GP G R
Sbjct: 1400 EEGVTGLSGKRGNPGVLGLPGAQGPPGFKGETGLSGQVGPSGKR 1443



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 89/173 (51%), Gaps = 33/173 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---------------------RGEKGAPGVVGPPGP 150
            PG +G IG++G+ GA G  G+ G+                      G++G PGV+G PG 
Sbjct: 1362 PGPRGVIGRQGQEGAPGPDGIHGKDGSAGQKGEQGEDGEEGVTGLSGKRGNPGVLGLPGA 1421

Query: 151  QGIPG------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            QG PG              GKRGP G+MG PG +G  G +G+ G  G+ G+PG  GL G 
Sbjct: 1422 QGPPGFKGETGLSGQVGPSGKRGPPGEMGPPGARGDLGTKGQPGDFGESGFPGIAGLFGP 1481

Query: 199  DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G PG+ G  GI G  G  G+ GK+G+ G  GIPG  G+ G KG  G RG  G
Sbjct: 1482 KGPPGDLGFKGIQGPKGPQGLMGKEGVIGPLGIPGPTGSPGPKGDKGSRGETG 1534



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 86/209 (41%), Gaps = 60/209 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------VVGPPGPQGIPGDEGKR-- 160
            PG +GP+G+KG  G  G  G KGE G  G PG          +GP G  GI G++G R  
Sbjct: 893  PGAEGPLGRKGFPGKPGPDGSKGEPGNSGRPGKLGELGLMGFIGPVGEPGIVGEKGDRGM 952

Query: 161  -------------------------------------------GPKGDMGYPGPQGIPGD 177
                                                       GPKG  G  GP G+ G+
Sbjct: 953  AGPPGPPGAKGSMGHPGIPGGIGEPGAPGPPGPTGTRGSPGVRGPKGRRGARGPDGLVGE 1012

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G +G KG +G  G+ GL G+ G  GE       G  GI G +G  G  G  G PG  G 
Sbjct: 1013 LGPQGAKGLLGNTGKDGLHGQQGKIGEIGEAGPRGFPGIQGPSGPQGTKGPLGDPGPQGA 1072

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GE G  GP G+ G+ G+ G PG
Sbjct: 1073 QGPPGPLGEIGHKGPPGSVGRRGLPGEPG 1101



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 56/117 (47%), Gaps = 33/117 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER------------------------GEKGAPGVVGP 147
            PG QGP G KGE G  G++G  G+R                        GE G PG+ G 
Sbjct: 1419 PGAQGPPGFKGETGLSGQVGPSGKRGPPGEMGPPGARGDLGTKGQPGDFGESGFPGIAGL 1478

Query: 148  PGPQGIPGD------EGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
             GP+G PGD      +G +GP+G MG     GP GIPG  G  GPKGD G  G  GL
Sbjct: 1479 FGPKGPPGDLGFKGIQGPKGPQGLMGKEGVIGPLGIPGPTGSPGPKGDKGSRGETGL 1535



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 85/210 (40%), Gaps = 54/210 (25%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGYPGPQGIP 175
            G +G +G  G  G +G  G KG PG  GP G +G PG+ G+ G  G+   MG+ GP G P
Sbjct: 882  GDEGPVGPHGIPGAEGPLGRKGFPGKPGPDGSKGEPGNSGRPGKLGELGLMGFIGPVGEP 941

Query: 176  GDEGKRG------------PKGDM------------------------------GYPGRI 193
            G  G++G             KG M                              G  GR 
Sbjct: 942  GIVGEKGDRGMAGPPGPPGAKGSMGHPGIPGGIGEPGAPGPPGPTGTRGSPGVRGPKGRR 1001

Query: 194  GLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGL------PGKDGIPGTNGTNGEKGMT 244
            G  G DGL GE    G  G+ G  G DG+ G+ G        G  G PG  G +G +G  
Sbjct: 1002 GARGPDGLVGELGPQGAKGLLGNTGKDGLHGQQGKIGEIGEAGPRGFPGIQGPSGPQGTK 1061

Query: 245  GPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            GP G+ G  G  G PG      +K    S+
Sbjct: 1062 GPLGDPGPQGAQGPPGPLGEIGHKGPPGSV 1091



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 6/104 (5%)

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G KGD G       PG + + G KGD+G PG  G  G+ G  G+ G  G  G  G  G 
Sbjct: 608 KGQKGDPGL-----SPG-KARNGQKGDVGLPGLTGFPGQSGRKGQKGYLGPAGHPGDQGE 661

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G DG PG  G PG  G  G  G  GP+G+RG  G+ G+ G P 
Sbjct: 662 QGPDGNPGAKGYPGRQGLPGPVGEPGPKGSRGYIGLPGLFGLPG 705



 Score = 39.3 bits (90), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           G+PGL     RNG  G     GLPG  G PG +G  G+KG  GP G+ G  G  G  G P
Sbjct: 612 GDPGLSPGKARNGQKG---DVGLPGLTGFPGQSGRKGQKGYLGPAGHPGDQGEQGPDGNP 668

Query: 263 AICAY 267
               Y
Sbjct: 669 GAKGY 673


>gi|296484376|tpg|DAA26491.1| TPA: collagen, type XXVII, alpha 1 [Bos taurus]
          Length = 1424

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 94/197 (47%), Gaps = 30/197 (15%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG   +  +   PG  GP G+ G  G+KGE G KG++G+ GAPG  G  G QG+PG  
Sbjct: 934  GVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPGRRGIQGLQGLPGPR 993

Query: 158  GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G +G  G  GP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 994  GVVGRQGPEGVAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGDPGVAGLPGAQGPP 1053

Query: 203  GEPGLDGIPGR---------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT------GPR 247
            G  G  G+PG+          G  G+PG  G PG  G PG +G  G  GM       GP+
Sbjct: 1054 GFKGESGLPGQMGPPGKRGTEGGMGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPQ 1113

Query: 248  GNRGKSGINGVPGTPAI 264
            G+ G  GI G  G P +
Sbjct: 1114 GDVGFKGIQGPRGPPGL 1130



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 84/145 (57%), Gaps = 9/145 (6%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G+EG +G +G  G 
Sbjct: 918  RGDRGEPGDPGYPGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGA 977

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
            PGR G+ G  GLPG     G+ GR G +G+ G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 978  PGRRGIQGLQGLPGP---RGVVGRQGPEGVAGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 1034

Query: 247  RGNRGKSGINGVPGTPAICAYKRES 271
             G RG  G+ G+PG      +K ES
Sbjct: 1035 AGKRGDPGVAGLPGAQGPPGFKGES 1059



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 81/143 (56%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G+ G  G  G +G    +GE G PG +GPPG         KRG +G MG 
Sbjct: 1029 PGPMGPAGKRGDPGVAGLPGAQGPPGFKGESGLPGQMGPPG---------KRGTEGGMGL 1079

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G  G+ G  GI G  G  G+ GK+G+ G 
Sbjct: 1080 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPQGDVGFKGIQGPRGPPGLMGKEGIIGP 1139

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1140 LGILGPSGRQGPKGDKGSRGDLG 1162



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 77/145 (53%), Gaps = 12/145 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++
Sbjct: 654 GQKGDPGLSPGKAHDGAKGDMGLPGLTGNPGPLGR---------KGQKGYPGPTGHPGEQ 704

Query: 179 GKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+ GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  
Sbjct: 705 GQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKR 764

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  G RG  G++G PG
Sbjct: 765 GKMGRPGFPGDFGERGPPGLDGNPG 789



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 74/167 (44%), Positives = 82/167 (49%), Gaps = 36/167 (21%)

Query: 121 KGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           K   GAKG+MG+ G          +G+KG PG  G PG QG PG EG  G KG   YPG 
Sbjct: 665 KAHDGAKGDMGLPGLTGNPGPLGRKGQKGYPGPTGHPGEQGQPGPEGSPGAKG---YPGR 721

Query: 172 QGIPGDEGKRGPKGDMGY---PGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           QG+PG  G  GPKG  GY   PG  GL   DG  GLPG PG  G  GR G  G  G+ G 
Sbjct: 722 QGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGP 781

Query: 226 PGKDGIPGTN------------------GTNGEKGMTGPRGNRGKSG 254
           PG DG PG                    G  GEKG TG +G +G  G
Sbjct: 782 PGLDGNPGELGLPGPPGVPGLIGPEGKPGKQGEKGRTGAKGAKGYQG 828



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 83/154 (53%), Gaps = 12/154 (7%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G+ G +G  G  G++G+ G PG  G PGP+G  G+EG +G +G  G PG +GI G +
Sbjct: 928  GYPGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPGRRGIQGLQ 987

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGL---------DGIP---GRNGMDGIPGKDGLP 226
            G  GP+G +G  G  G+ G DGLPG  G          DG P   G  G  G PG  GLP
Sbjct: 988  GLPGPRGVVGRQGPEGVAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGDPGVAGLP 1047

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1048 GAQGPPGFKGESGLPGQMGPPGKRGTEGGMGLPG 1081



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 84/188 (44%), Gaps = 51/188 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G++G+ G +G  G KG  G +G PG VG PGP+G          +G +G PG 
Sbjct: 695 PGPTGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGS---------RGYIGLPGL 745

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGR------------ 213
            G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG             
Sbjct: 746 FGLPGSDGER---GLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGELGLPGPPGVPGL 802

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGE---------------------KGMTGPRGNRGK 252
            G +G PGK G  G+ G  G  G  G+                     +G  GP G  G+
Sbjct: 803 IGPEGKPGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGR 862

Query: 253 SGINGVPG 260
            G  G PG
Sbjct: 863 MGAQGEPG 870



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 89/238 (37%), Gaps = 88/238 (36%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMG 167
           P G  GP G +G IG  G  G+ G  GE+G PGV G  G     G PGD G+RGP G  G
Sbjct: 727 PVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPPGLDG 786

Query: 168 YPG---------------PQGIPGDEGKR---GPKGDMGYPGRI---------------- 193
            PG               P+G PG +G++   G KG  GY G++                
Sbjct: 787 NPGELGLPGPPGVPGLIGPEGKPGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPG 846

Query: 194 -----------GLDGRDGLPGEPGLDGIPGRNGM-------------------------- 216
                      G  GR G  GEPGL G  G  G+                          
Sbjct: 847 PKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIMGPLGPPGPKGEKGEQGEDGKAEGPP 906

Query: 217 --------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                          G PG  G PG++G+ G  G  G++G  G  G RG+ G  G  G
Sbjct: 907 GPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKG 964



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 55/100 (55%), Gaps = 12/100 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVV---GPPGPQ---GIPGDEG 158
            +  PPG +G  G  G  G +GE G KG+    GE G PG+    GP GPQ   G  G +G
Sbjct: 1064 QMGPPGKRGTEGGMGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPQGDVGFKGIQG 1123

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
             RGP G MG     GP GI G  G++GPKGD G  G +GL
Sbjct: 1124 PRGPPGLMGKEGIIGPLGILGPSGRQGPKGDKGSRGDLGL 1163



 Score = 43.1 bits (100), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 54/145 (37%), Gaps = 39/145 (26%)

Query: 158 GKRGPKGDM---------------------------------------GYPGPQGIPGDE 178
           G  GPKGD                                        G  G  G+   +
Sbjct: 606 GPPGPKGDCGLPGPPGLPGLPGPPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSPGK 665

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
              G KGDMG PG  G  G  G  G+ G  G  G  G  G PG +G PG  G PG  G  
Sbjct: 666 AHDGAKGDMGLPGLTGNPGPLGRKGQKGYPGPTGHPGEQGQPGPEGSPGAKGYPGRQGLP 725

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  GP+G+RG  G+ G+ G P 
Sbjct: 726 GPVGDPGPKGSRGYIGLPGLFGLPG 750


>gi|348510895|ref|XP_003442980.1| PREDICTED: collagen alpha-1(X) chain-like [Oreochromis niloticus]
          Length = 645

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 89/173 (51%), Gaps = 6/173 (3%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGD 156
           +G   S     P G QGP G  G  GA G  G    +GERG  GAPG VGP G  G  G 
Sbjct: 288 RGATGSPGATGPKGEQGPTGYTGATGATGPTGPTGPQGERGFTGAPGAVGPKGDTGATGP 347

Query: 157 EGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           +G +G KGD G   + G QG PG  G  G +G+ G  G  G  G  G PG PG+ G  G 
Sbjct: 348 QGPKGNKGDQGAQGFQGKQGYPGPAGPAGARGETGPSGEKGNVGAPGTPGAPGIPGPAGP 407

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G  G PG+ G  G DG PG+ G  G +G  GP+G +G  G+ G PG   + A
Sbjct: 408 KGHPGRPGEQGPSGSDGAPGSRGPTGPQGPAGPQGLKGHPGLPGAPGPAGLAA 460



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 88/177 (49%), Gaps = 21/177 (11%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------- 161
           Y  PG  G  G++G  G+ G  G KGE+G  G  G  G  GP G  G +G+RG       
Sbjct: 276 YGKPGANGEKGERGATGSPGATGPKGEQGPTGYTGATGATGPTGPTGPQGERGFTGAPGA 335

Query: 162 --PKGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIG---LDGRDGLPGEPGLDGIPGR 213
             PKGD G  GPQG  G   D+G +G +G  GYPG  G     G  G  GE G  G PG 
Sbjct: 336 VGPKGDTGATGPQGPKGNKGDQGAQGFQGKQGYPGPAGPAGARGETGPSGEKGNVGAPGT 395

Query: 214 NGMDGIP------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  GIP      G  G PG+ G  G++G  G +G TGP+G  G  G+ G PG P  
Sbjct: 396 PGAPGIPGPAGPKGHPGRPGEQGPSGSDGAPGSRGPTGPQGPAGPQGLKGHPGLPGA 452



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 74/160 (46%), Gaps = 26/160 (16%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKG--DMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           + GEKG  G  GP GP+G+PG  G  GP G    G PGP G+PG  G RG  G  G+PG 
Sbjct: 100 DSGEKGDTGATGPQGPRGVPGSPGSPGPAGLSATGKPGPSGLPGAMGPRGEPGLKGHPGI 159

Query: 193 IGLDGRDG-----LPGEPGLDGI-----------------PGRNGMDGIPGKDGLPGKDG 230
            GL G  G      PG  G  G                  PG+ G  G PGK G PG DG
Sbjct: 160 PGLPGSKGDRGVGAPGPQGETGPEGATGPPGAPGPAGVGRPGKPGSPGEPGKSGSPGSDG 219

Query: 231 IPGTNGTNGEKGMTGPRGNR--GKSGINGVPGTPAICAYK 268
            PG  G  G KG TG  G    GK G NG PG P     K
Sbjct: 220 APGPMGPQGPKGHTGAPGVGLPGKPGENGAPGLPGSSGPK 259



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 94/222 (42%), Gaps = 50/222 (22%)

Query: 104 NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG----------- 152
           ++T +  P GL G +G +GE G KG  G+ G  G KG  GV G PGPQG           
Sbjct: 131 SATGKPGPSGLPGAMGPRGEPGLKGHPGIPGLPGSKGDRGV-GAPGPQGETGPEGATGPP 189

Query: 153 ---------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DG 200
                     PG  G  G  G  G PG  G PG  G +GPKG  G PG +GL G+   +G
Sbjct: 190 GAPGPAGVGRPGKPGSPGEPGKSGSPGSDGAPGPMGPQGPKGHTGAPG-VGLPGKPGENG 248

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM----------------- 243
            PG PG  G  G  G  G PG  G+PG  G PG NG  GE+G                  
Sbjct: 249 APGLPGSSGPKGNQGPSGAPGAPGVPGY-GKPGANGEKGERGATGSPGATGPKGEQGPTG 307

Query: 244 -------TGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
                  TGP G  G  G  G  G P     K ++ +  P  
Sbjct: 308 YTGATGATGPTGPTGPQGERGFTGAPGAVGPKGDTGATGPQG 349


>gi|410969849|ref|XP_003991404.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(VI) chain [Felis
           catus]
          Length = 1038

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 89/196 (45%), Gaps = 36/196 (18%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      E   PG  G +G  G  G KGE G +GE+G +G+ G  G  G +GI G +G +
Sbjct: 275 GLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGSKGYKGEKGKRGIDGVDGMK 334

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G  G PG +G PG +G +GP G  G  G  GL G     G PG DG PGR G  G P
Sbjct: 335 GEMGYPGLPGCKGSPGFDGAQGPPGPKGDAGAFGLKGEK---GAPGADGEPGRPGSTGPP 391

Query: 221 ------------------GKDGLPGKDGI---------------PGTNGTNGEKGMTGPR 247
                             G +G PG DG                PG  G  G+ G  GP+
Sbjct: 392 GDEGEPGLPGPPGEKGEAGDEGNPGPDGAPGERGGPGERGPRGTPGVRGPRGDPGEAGPQ 451

Query: 248 GNRGKSGINGVPGTPA 263
           G++G+ G  G+PG P 
Sbjct: 452 GDQGREGPVGIPGDPG 467



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 85/205 (41%), Gaps = 64/205 (31%)

Query: 113 GLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGP------------------- 150
           G QGP G KG+ GA   KGE G  G  GE G PG  GPPG                    
Sbjct: 353 GAQGPPGPKGDAGAFGLKGEKGAPGADGEPGRPGSTGPPGDEGEPGLPGPPGEKGEAGDE 412

Query: 151 --------------------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
                                     +G  GD G+ GP+GD G  GP GIPGD G+ GP 
Sbjct: 413 GNPGPDGAPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPVGIPGDPGEAGPI 472

Query: 185 GDMGYPGRIGLDGRDG---------------LPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  GY G  G  G +G               L GE G DG PG NG +G PG  G PG  
Sbjct: 473 GPKGYRGDEGPPGPEGSRGAPGPTGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYPGSR 531

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSG 254
           G PG NGT G  G+ G  G  G  G
Sbjct: 532 GPPGINGTKGYPGLKGDEGEAGDPG 556



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 68/128 (53%), Gaps = 3/128 (2%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           +GERG+ G PG  G  G  G PGD    GP G  G  G +G  G++G RG KG  G  G+
Sbjct: 268 EGERGKPGLPGEKGEAGDPGRPGD---LGPVGYQGMKGEKGSRGEKGSRGSKGYKGEKGK 324

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G+DG DG+ GE G  G+PG  G  G  G  G PG  G  G  G  GEKG  G  G  G+
Sbjct: 325 RGIDGVDGMKGEMGYPGLPGCKGSPGFDGAQGPPGPKGDAGAFGLKGEKGAPGADGEPGR 384

Query: 253 SGINGVPG 260
            G  G PG
Sbjct: 385 PGSTGPPG 392



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 78/148 (52%), Gaps = 12/148 (8%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G +G+ G+ GE+GE G PG  G  GP G  G +G++G +G+ G  G +G  G++GKRG  
Sbjct: 269 GERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGSKGYKGEKGKRGID 328

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G  G +G  G  G  G PG DG  G  G  G  G  GL G+ G PG +G  G  G T
Sbjct: 329 GVDGMKGEMGYPGLPGCKGSPGFDGAQGPPGPKGDAGAFGLKGEKGAPGADGEPGRPGST 388

Query: 245 GPRGN------------RGKSGINGVPG 260
           GP G+            +G++G  G PG
Sbjct: 389 GPPGDEGEPGLPGPPGEKGEAGDEGNPG 416



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 62/127 (48%), Gaps = 18/127 (14%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GE+G PG+ G  G  G PG  G  GP G  G  G +G  G++G RG KG  G  G+ G+D
Sbjct: 269 GERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGSKGYKGEKGKRGID 328

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G DG+ GE                   G PG  G  G+ G +G +G  GP+G+ G  G+ 
Sbjct: 329 GVDGMKGE------------------MGYPGLPGCKGSPGFDGAQGPPGPKGDAGAFGLK 370

Query: 257 GVPGTPA 263
           G  G P 
Sbjct: 371 GEKGAPG 377



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 54/123 (43%), Gaps = 30/123 (24%)

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEP------------------- 205
           Y G +G PG  G+   KG+ G PGR   +G  G  G+ GE                    
Sbjct: 267 YEGERGKPGLPGE---KGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGSKGYKGEKG 323

Query: 206 -----GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                G+DG+ G  G  G+PG  G PG DG  G  G  G+ G  G +G +G  G +G PG
Sbjct: 324 KRGIDGVDGMKGEMGYPGLPGCKGSPGFDGAQGPPGPKGDAGAFGLKGEKGAPGADGEPG 383

Query: 261 TPA 263
            P 
Sbjct: 384 RPG 386



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G+ GLPGE G  G PGR G  G  G  G+ G+ G  G  G+ G KG    +G +GK 
Sbjct: 269 GERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGSKGY---KGEKGKR 325

Query: 254 GINGVPGTPAICAY 267
           GI+GV G      Y
Sbjct: 326 GIDGVDGMKGEMGY 339



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 48/108 (44%), Gaps = 23/108 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMG------------------VKGERGEKGAPGVVGPPGPQGI 153
           PG  GPIG KG  G +G  G                  + GERGE G PG  G  G  G 
Sbjct: 466 PGEAGPIGPKGYRGDEGPPGPEGSRGAPGPTGPPGDPGLMGERGEDGPPG-NGTEGFPGF 524

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG----DMGYPGRIGLDG 197
           PG  G RGP G  G  G  G+ GDEG+ G  G    D+  PG  G  G
Sbjct: 525 PGYPGSRGPPGINGTKGYPGLKGDEGEAGDPGEDNNDIAPPGVKGAKG 572


>gi|241669409|ref|XP_002399630.1| glycine rich secreted cement protein, putative [Ixodes scapularis]
 gi|215506175|gb|EEC15669.1| glycine rich secreted cement protein, putative [Ixodes scapularis]
          Length = 1711

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 97/164 (59%), Gaps = 14/164 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+G  G  G  GAKG+ G  G  G  G PG VGP GP G PG +G RG KGD GYP  
Sbjct: 1086 PGLKGKDGNDGFPGAKGDRGNDGYPGAPGLPGPVGPVGPAGFPGLDGIRGLKGDRGYP-- 1143

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGL---------DGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G+PG++G++G KGD G PG  G+         DG  GLPGE G  G PG  G++G+ G+
Sbjct: 1144 -GLPGEKGEKGFKGDEGTPGFPGVPGEKGTRGYDGTPGLPGEKGDRGFPGAPGLNGLDGE 1202

Query: 223  DGLPGKDGIPGTNGTNGEKGM--TGPRGNRGKSGINGVPGTPAI 264
             G PG+ G PG  G  G  G+   G +G+RG+ G +G PG P +
Sbjct: 1203 RGFPGEPGAPGLQGPPGRGGVGANGEKGDRGRPGADGFPGLPGL 1246



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 80/196 (40%), Positives = 99/196 (50%), Gaps = 47/196 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PGLQGP G +G +GA GE G +G  G  G PG+ G  G  G+PG  G+RGP         
Sbjct: 1212 PGLQGPPG-RGGVGANGEKGDRGRPGADGFPGLPGLKGDAGLPGFPGERGPPGESSAGDM 1270

Query: 163  ---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG---------------------R 198
               KGD G+PG  G+PG +G  GPKG  G+PG  G  G                     +
Sbjct: 1271 PGPKGDRGFPGAPGLPGRDGYPGPKGLDGFPGLPGEKGDAGYPGPPGLPGPSGPSGLPGQ 1330

Query: 199  DGLPGEP---------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP--- 246
            DG PG P         G+ GIPG  G+ G  G  GLPG DG PG NG  G+KG  GP   
Sbjct: 1331 DGFPGPPGVKGDKGDAGIPGIPGLAGLKGDAGYPGLPGLDGPPGINGLPGQKGEPGPANI 1390

Query: 247  -RGNRGKSGINGVPGT 261
             +G++G  G+ G+PG 
Sbjct: 1391 LQGDKGDRGLPGLPGA 1406



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 77/148 (52%), Gaps = 6/148 (4%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG----- 173
            G+KG  G  G  G KG+RG  G PG  G PG  G PG  G +G  G+ G+PG +G     
Sbjct: 1048 GEKGSEGLSGFPGAKGDRGYPGLPGAPGQPGRDGEPGFPGLKGKDGNDGFPGAKGDRGND 1107

Query: 174  -IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
              PG  G  GP G +G  G  GLDG  GL G+ G  G+PG  G  G  G +G PG  G+P
Sbjct: 1108 GYPGAPGLPGPVGPVGPAGFPGLDGIRGLKGDRGYPGLPGEKGEKGFKGDEGTPGFPGVP 1167

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  GT G  G  G  G +G  G  G PG
Sbjct: 1168 GEKGTRGYDGTPGLPGEKGDRGFPGAPG 1195



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 90/222 (40%), Gaps = 50/222 (22%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
               G      +  P GL G  G +G  G  G  G KG+ G  GAPG  GPPG  G+ G+ 
Sbjct: 931  GFPGLPGEKGDRGPAGLPGLPGVRGSDGFPGAAGEKGDAGFPGAPGFDGPPGLPGVKGEP 990

Query: 158  GKRGPKGDMGYPG----------------------------------------PQGIPGD 177
            G  G  G+ G PG                                        P G PG+
Sbjct: 991  GLPGAPGEKGLPGFAAEKGERGFPGLPGPRGPPGQPGAPGLPGDKGDDGRDGFP-GTPGE 1049

Query: 178  EGKR------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            +G        G KGD GYPG  G  G+ G  GEPG  G+ G++G DG PG  G  G DG 
Sbjct: 1050 KGSEGLSGFPGAKGDRGYPGLPGAPGQPGRDGEPGFPGLKGKDGNDGFPGAKGDRGNDGY 1109

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGT---PAICAYKRE 270
            PG  G  G  G  GP G  G  GI G+ G    P +   K E
Sbjct: 1110 PGAPGLPGPVGPVGPAGFPGLDGIRGLKGDRGYPGLPGEKGE 1151



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 88/210 (41%), Gaps = 51/210 (24%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---ERGEK------------------ 139
            GF  +     PPGL G  G+ G  GA GE G+ G   E+GE+                  
Sbjct: 970  GFPGAPGFDGPPGLPGVKGEPGLPGAPGEKGLPGFAAEKGERGFPGLPGPRGPPGQPGAP 1029

Query: 140  ---------------GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
                           G PG  G  G  G PG       KGD GYPG   +PG  G+ G  
Sbjct: 1030 GLPGDKGDDGRDGFPGTPGEKGSEGLSGFPGA------KGDRGYPG---LPGAPGQPGRD 1080

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTN 238
            G+ G+PG  G DG DG PG  G  G  G  G  G+PG        G PG DGI G  G  
Sbjct: 1081 GEPGFPGLKGKDGNDGFPGAKGDRGNDGYPGAPGLPGPVGPVGPAGFPGLDGIRGLKGDR 1140

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G+ G +G +G  G  G PG P +   K
Sbjct: 1141 GYPGLPGEKGEKGFKGDEGTPGFPGVPGEK 1170



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 80/174 (45%), Gaps = 40/174 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG--EKGAPGVVGPPGPQGIPGDEGKRGPKGDM--- 166
           PGL GP G  G IG KGE G KG  G    G  G+ G  G  G+PG +G+RGP+G+    
Sbjct: 371 PGLDGPQGHPGAIGPKGEPGPKGVPGISYPGIKGMDGSNGLDGVPGAKGERGPRGERGAP 430

Query: 167 -----------------------GYPGPQGIPGDEGKR------------GPKGDMGYPG 191
                                  G+PG  G PG  G +            G KG+ G  G
Sbjct: 431 GDSLNGIPGPPGPQGPKGDKGFDGHPGTHGTPGTPGHKGEPGGSCLSCIPGAKGEKGERG 490

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G  G+ G  G+ G  G PG  G DG PG+ G PG++G+PG  G +G KG  G
Sbjct: 491 LDGAKGQVGTRGQVGPQGPPGERGDDGPPGRAGAPGEEGLPGAPGRDGPKGDKG 544



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/138 (42%), Positives = 67/138 (48%), Gaps = 30/138 (21%)

Query: 131 GVKGERGE------KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G KGE+GE      KG  G  G  GPQG PG+ G  GP G  G PG +G+PG  G+ GPK
Sbjct: 481 GAKGEKGERGLDGAKGQVGTRGQVGPQGPPGERGDDGPPGRAGAPGEEGLPGAPGRDGPK 540

Query: 185 GDMGYPGRIGLDGRDGLPGE--PGLDGIPGRNGMDGIPGKDGLPGKD------------G 230
           GD G P RI        PGE  PG+    G  G DG PG  G  G+D            G
Sbjct: 541 GDKGEPARI-------SPGEFPPGIG---GDRGNDGAPGPRGFDGRDGPPGPPGPDGLRG 590

Query: 231 IPGTNGTNGEKGMTGPRG 248
           + G  G  G  G  GPRG
Sbjct: 591 LKGEKGDRGNDGAPGPRG 608



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 58/114 (50%), Gaps = 31/114 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAP-------------------------GVVGP 147
           G  G  G +G  GA+G  G KG +GE+G P                         G+ GP
Sbjct: 661 GYPGTAGDRGLPGARGPPGEKGAKGERGPPAPGNVLGPIPGPPGPPGPRGRDGLDGLPGP 720

Query: 148 PGPQGIPGDE---GKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           PG  G PG+E   G +G KGD G+   PGP+G+PG  G++G  G MG+PG +GL
Sbjct: 721 PGRDGFPGNEGVLGLKGDKGDAGFPGMPGPRGLPGPRGEKGETGPMGFPGELGL 774



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 83/167 (49%), Gaps = 37/167 (22%)

Query: 131 GVKGERGEKGAPGVVGPP---GPQGIP---GDEGKRGPKGDMG--YPGPQ---------G 173
           G  G +G+KG PG+ G P   GPQG P   G +G+ GPKG  G  YPG +         G
Sbjct: 354 GPPGPKGDKGDPGLEGLPGLDGPQGHPGAIGPKGEPGPKGVPGISYPGIKGMDGSNGLDG 413

Query: 174 IPGDEGKRGPKGDMGYPGRI-----------------GLDGR---DGLPGEPGLDGIPGR 213
           +PG +G+RGP+G+ G PG                   G DG     G PG PG  G PG 
Sbjct: 414 VPGAKGERGPRGERGAPGDSLNGIPGPPGPQGPKGDKGFDGHPGTHGTPGTPGHKGEPGG 473

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + +  IPG  G  G+ G+ G  G  G +G  GP+G  G+ G +G PG
Sbjct: 474 SCLSCIPGAKGEKGERGLDGAKGQVGTRGQVGPQGPPGERGDDGPPG 520



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 52/94 (55%), Gaps = 9/94 (9%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G+PG+ G+       G+PG   +PG++G RGP G  G PG  G DG  G  GE G  G P
Sbjct: 919  GLPGEPGR---DSSSGFPG---LPGEKGDRGPAGLPGLPGVRGSDGFPGAAGEKGDAGFP 972

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G  G DG PG   LPG  G PG  G  GEKG+ G
Sbjct: 973  GAPGFDGPPG---LPGVKGEPGLPGAPGEKGLPG 1003



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 53/94 (56%), Gaps = 10/94 (10%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP-------K 163
            PPG++G  G  G  G  G  G+KG+ G  G PG+ GPPG  G+PG +G+ GP       K
Sbjct: 1336 PPGVKGDKGDAGIPGIPGLAGLKGDAGYPGLPGLDGPPGINGLPGQKGEPGPANILQGDK 1395

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            GD G PG   +PG  G  GPKG  G PG  GL G
Sbjct: 1396 GDRGLPG---LPGASGPPGPKGFDGLPGFPGLKG 1426



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 65/136 (47%), Gaps = 24/136 (17%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGP------------QGIPGDEGKRGPKGDMGYPGPQGI 174
            KG+ G  G+ G  G PG+ G  G              G PG  G+ G     G+P   G+
Sbjct: 879  KGDRGYPGDSGNPGFPGLPGAKGEGGLPGLPGLPGYDGQPGLPGEPGRDSSSGFP---GL 935

Query: 175  PGDEGKRGP---------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            PG++G RGP         +G  G+PG  G  G  G PG PG DG PG  G+ G PG  G 
Sbjct: 936  PGEKGDRGPAGLPGLPGVRGSDGFPGAAGEKGDAGFPGAPGFDGPPGLPGVKGEPGLPGA 995

Query: 226  PGKDGIPGTNGTNGEK 241
            PG+ G+PG     GE+
Sbjct: 996  PGEKGLPGFAAEKGER 1011



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 68/141 (48%), Gaps = 32/141 (22%)

Query: 113 GLQGPIGQKGEIGA-----KGEMGVKGERGEKGAPG-----VVGPP-------------- 148
           G++GP+G KG +G      KGE G KG +G+KG PG     V  PP              
Sbjct: 144 GVEGPVGPKGNMGIGFSGNKGEPGEKGPKGQKGPPGNCTEPVGKPPDSIAGPPGPPGMKG 203

Query: 149 --------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                   G  G+PG+ G+ G  GD+G  G +G+PG  G RG  G  G  G +G  G  G
Sbjct: 204 MKGEPGFKGEHGLPGNPGQPGRHGDLGMKGEKGLPGHPGPRGKDGYPGPVGPVGFKGDRG 263

Query: 201 LPGEPGLDGIPGRNGMDGIPG 221
             G PGL G PG  G  GIPG
Sbjct: 264 DDGLPGLMGTPGLKGDSGIPG 284



 Score = 45.8 bits (107), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 62/120 (51%), Gaps = 12/120 (10%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLD------GIPGR 213
           KGD GYPG  G PG  G  G KG+ G PG  GL   DG+ GLPGEPG D      G+PG 
Sbjct: 879 KGDRGYPGDSGNPGFPGLPGAKGEGGLPGLPGLPGYDGQPGLPGEPGRDSSSGFPGLPGE 938

Query: 214 N---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
               G  G+PG  G+ G DG PG  G  G+ G  G  G  G  G+ GV G P +     E
Sbjct: 939 KGDRGPAGLPGLPGVRGSDGFPGAAGEKGDAGFPGAPGFDGPPGLPGVKGEPGLPGAPGE 998



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 67/144 (46%), Gaps = 28/144 (19%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           EG  GPKGD G PG +G+PG +G +      G+PG IG  G  G  G PG+   PG  GM
Sbjct: 353 EGPPGPKGDKGDPGLEGLPGLDGPQ------GHPGAIGPKGEPGPKGVPGIS-YPGIKGM 405

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTG-----------------PRGNRGKSGINGVP 259
           DG  G DG+PG     G  G  GE+G  G                  +G  G  G +G P
Sbjct: 406 DGSNGLDGVPGAK---GERGPRGERGAPGDSLNGIPGPPGPQGPKGDKGFDGHPGTHGTP 462

Query: 260 GTPAICAYKRESC-SLLPNSETSQ 282
           GTP        SC S +P ++  +
Sbjct: 463 GTPGHKGEPGGSCLSCIPGAKGEK 486



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 56/101 (55%), Gaps = 8/101 (7%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
            G  GVKG++G+ G PG+   PG  G+ GD G  G  G  G PG  G+PG +G+ GP   +
Sbjct: 1335 GPPGVKGDKGDAGIPGI---PGLAGLKGDAGYPGLPGLDGPPGINGLPGQKGEPGPANIL 1391

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                  G  G  GLPG PG  G PG  G DG+PG  GL G+
Sbjct: 1392 -----QGDKGDRGLPGLPGASGPPGPKGFDGLPGFPGLKGE 1427



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 64/135 (47%), Gaps = 24/135 (17%)

Query: 122 GEIGAKGEMGVKGERGEKGA------PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G  G  G  G  G +GE G       PG  G  G +G+ G +G+ G +G +G   PQG P
Sbjct: 454 GHPGTHGTPGTPGHKGEPGGSCLSCIPGAKGEKGERGLDGAKGQVGTRGQVG---PQGPP 510

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG--IPGKDGLPGKDGIPG 233
           G+      +GD G PGR G  G +GLPG PG DG  G  G      PG+   P     PG
Sbjct: 511 GE------RGDDGPPGRAGAPGEEGLPGAPGRDGPKGDKGEPARISPGE--FP-----PG 557

Query: 234 TNGTNGEKGMTGPRG 248
             G  G  G  GPRG
Sbjct: 558 IGGDRGNDGAPGPRG 572



 Score = 39.3 bits (90), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 54/105 (51%), Gaps = 25/105 (23%)

Query: 152  GIPGDEGKRGPKGDMGYPG-P--QGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLP--- 202
            G PG  G +G KGD G PG P   G+         KGD GYPG  GLDG    +GLP   
Sbjct: 1332 GFPGPPGVKGDKGDAGIPGIPGLAGL---------KGDAGYPGLPGLDGPPGINGLPGQK 1382

Query: 203  GEPG----LDGIPGRNGMDGIPGKDGLPGK---DGIPGTNGTNGE 240
            GEPG    L G  G  G+ G+PG  G PG    DG+PG  G  GE
Sbjct: 1383 GEPGPANILQGDKGDRGLPGLPGASGPPGPKGFDGLPGFPGLKGE 1427


>gi|87196339|ref|NP_001839.2| collagen alpha-1(VI) chain precursor [Homo sapiens]
 gi|125987811|sp|P12109.3|CO6A1_HUMAN RecName: Full=Collagen alpha-1(VI) chain; Flags: Precursor
 gi|30851190|gb|AAH52575.1| Collagen, type VI, alpha 1 [Homo sapiens]
 gi|119629727|gb|EAX09322.1| collagen, type VI, alpha 1, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 97/213 (45%), Gaps = 63/213 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPGL+G  G +GE   +G+ G+ GE+GE G PG  G  GP G  G +G++G +G+ G  G
Sbjct: 258 PPGLRGDPGFEGE---RGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRG 314

Query: 171 PQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGL---------------------PG 203
           P+G  G++GKR      G KG+MGYPG  G  G  G                       G
Sbjct: 315 PKGYKGEKGKRGIDGVDGVKGEMGYPGLPGCKGSPGFDGIQGPPGPKGDPGAFGLKGEKG 374

Query: 204 EPGLDGIPGRNGMDG------------------IPGKDGLPGKDGI-------------- 231
           EPG DG  GR G  G                    G +G PG DG               
Sbjct: 375 EPGADGEAGRPGSSGPSGDEGQPGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGERGPRG 434

Query: 232 -PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            PGT G  G+ G  GP+G++G+ G  GVPG P 
Sbjct: 435 TPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPG 467



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 79/187 (42%), Gaps = 52/187 (27%)

Query: 119 GQKGEIGAKGEMGVKGERGEKG---------------APGVVGPPGPQGIPGDE------ 157
           G+KGE GA GE G  G  G  G                 G  G PGP G PG+       
Sbjct: 371 GEKGEPGADGEAGRPGSSGPSGDEGQPGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGER 430

Query: 158 ------GKRGPKGDMGYPGPQ---------GIPGDEGKRGPKGDMGYPGRIGLDGRD--- 199
                 G RGP+GD G  GPQ         G+PGD G+ GP G  GY G  G  G +   
Sbjct: 431 GPRGTPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGSEGAR 490

Query: 200 ------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                       GL GE G DG P  NG +G PG  G PG  G PG NGT G  G+ G  
Sbjct: 491 GAPGPAGPPGDPGLMGERGEDG-PAGNGTEGFPGFPGYPGNRGAPGINGTKGYPGLKGDE 549

Query: 248 GNRGKSG 254
           G  G  G
Sbjct: 550 GEAGDPG 556



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 43/95 (45%), Gaps = 23/95 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMG------------------VKGERGEKGAP--GVVGPPGPQ 151
           PG  GPIG KG  G +G  G                  + GERGE G    G  G PG  
Sbjct: 466 PGEAGPIGPKGYRGDEGPPGSEGARGAPGPAGPPGDPGLMGERGEDGPAGNGTEGFPGFP 525

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           G PG+ G  G  G  GYP   G+ GDEG+ G  GD
Sbjct: 526 GYPGNRGAPGINGTKGYP---GLKGDEGEAGDPGD 557


>gi|395855170|ref|XP_003800043.1| PREDICTED: collagen alpha-1(IV) chain [Otolemur garnettii]
          Length = 1669

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 31/196 (15%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQG------IPGDEGKRGPKGDMGYPG 170
            GQ+G  G  GE G KGE+G+ G PG+   G PGP+G       PG  G++G KG +G PG
Sbjct: 1032 GQQGLPGLPGEKGSKGEKGQAGPPGIGIPGLPGPKGDQGLVGFPGSPGEKGEKGSIGIPG 1091

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---------G 221
               +PG  G +G  G +GYPG  GL G  G  G PGLDGIPG  G  G+P         G
Sbjct: 1092 ---MPGSPGSKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGIKGEAGLPGQPGSTGPAG 1148

Query: 222  KDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRGKSGINGVPGTPAICAYKRE 270
            + G PG DGIPG+ G  GE G+            G +G++G+ G  G+ GTP I   K E
Sbjct: 1149 QKGEPGSDGIPGSAGEKGEPGVPGRGFPGFPGTKGDKGSKGEVGFPGLAGTPGIPGPKGE 1208

Query: 271  SCSLLPNSETSQLLIP 286
               + P     Q  +P
Sbjct: 1209 QGFMGPPGPQGQTGLP 1224



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 100/187 (53%), Gaps = 19/187 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGY 168
            PG QG  G  G  G+KGEMGV G  G+ G+PG +G PG    +G PG  G  GP+GD G+
Sbjct: 863  PGQQGTPGIPGFPGSKGEMGVMGTPGQPGSPGPLGSPGLPGEKGDPGFPGSSGPRGDPGF 922

Query: 169  PGPQG---IPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G +G   +PG  G          +G KGD G  G+IG  G  G  G+PG  G+PG++G 
Sbjct: 923  KGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPVGEKGSRGDPGTPGVPGKDGQ 982

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY-KRESCSLL 275
             G PG    PG  G PG +GT G  G+ GP+G+ G  G+ G PG   +     ++    L
Sbjct: 983  VGQPGH---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGQQGLPGL 1039

Query: 276  PNSETSQ 282
            P  + S+
Sbjct: 1040 PGEKGSK 1046



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 86/159 (54%), Gaps = 23/159 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G  GPKGD G  G  G PG  
Sbjct: 948  GQKGDQGEKGQIGPVGEKGSRGDPGTPGVPGKDGQVGQPGHPGPKGDPGISGTPGAPGLP 1007

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--------G 230
            G +G  G MG PG          PGE G+ GIPG+ G+ G+PG+ G  G+         G
Sbjct: 1008 GPKGSVGGMGLPG---------TPGEKGVPGIPGQQGLPGLPGEKGSKGEKGQAGPPGIG 1058

Query: 231  IPGTNGTNGEKGMT------GPRGNRGKSGINGVPGTPA 263
            IPG  G  G++G+       G +G +G  GI G+PG+P 
Sbjct: 1059 IPGLPGPKGDQGLVGFPGSPGEKGEKGSIGIPGMPGSPG 1097



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 79/154 (51%), Gaps = 19/154 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKRGPKGDMGY 168
            PG  G  G  G +G  G  G+ GE+G+KG PG+ G P   G  G+PG  G  GP G  G 
Sbjct: 1093 PGSPGSKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGIKGEAGLPGQPGSTGPAGQKGE 1152

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG  GIPG  G+   KG+ G PGR             G  G PG  G  G  G+ G PG 
Sbjct: 1153 PGSDGIPGSAGE---KGEPGVPGR-------------GFPGFPGTKGDKGSKGEVGFPGL 1196

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
             G PG  G  GE+G  GP G +G++G+ G PG P
Sbjct: 1197 AGTPGIPGPKGEQGFMGPPGPQGQTGLPGAPGHP 1230



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 90/184 (48%), Gaps = 37/184 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG-----------------VVGPPGPQGIP 154
            PG  GP GQKGE G+ G  G  GE+GE G PG                  VG PG  G P
Sbjct: 1141 PGSTGPAGQKGEPGSDGIPGSAGEKGEPGVPGRGFPGFPGTKGDKGSKGEVGFPGLAGTP 1200

Query: 155  GDEGKRGPKGDMGYPGPQG---IPGDEGK--RGPKGDM---------------GYPGRIG 194
            G  G +G +G MG PGPQG   +PG  G    GPKGD                G PG  G
Sbjct: 1201 GIPGPKGEQGFMGPPGPQGQTGLPGAPGHPVEGPKGDRGPQGQPGLPGLPGPMGPPGLPG 1260

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            LDG  G  G+PG  G PG +G  G PG  G+PG  G PG  G+ G+ G  G  G +G+ G
Sbjct: 1261 LDGLKGEKGQPGWPGAPGVSGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGQKG 1320

Query: 255  INGV 258
            + G+
Sbjct: 1321 LPGL 1324



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 71/148 (47%), Gaps = 24/148 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G KG++G +G PG+ G  G  G+PG +G          PG  G PG +G+ G  G  G P
Sbjct: 840 GPKGDKGAQGLPGLTGQSGLPGLPGQQG---------TPGIPGFPGSKGEMGVMGTPGQP 890

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDG---------IPGTN 235
           G  G  G  GLPGE G  G PG +G  G PG  G      LPGK G         + G  
Sbjct: 891 GSPGPLGSPGLPGEKGDPGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQK 950

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  GEKG  GP G +G  G  G PG P 
Sbjct: 951 GDQGEKGQIGPVGEKGSRGDPGTPGVPG 978



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 44/68 (64%), Gaps = 6/68 (8%)

Query: 131 GVKGERGEKGAP---GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           GVKG++GE+G P   GV+G PG QG  G +G  G KGD G P   G+PG +G RGP G  
Sbjct: 43  GVKGQKGERGLPGLQGVIGFPGMQGPEGPQGPAGQKGDTGEP---GLPGTKGTRGPPGAS 99

Query: 188 GYPGRIGL 195
           GYPG  GL
Sbjct: 100 GYPGNPGL 107



 Score = 47.0 bits (110), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 82/157 (52%), Gaps = 20/157 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGK--RGPKGDM 166
            PG +G  G KGE+G  G  G  G  G KG  G +GPPGPQG   +PG  G    GPKGD 
Sbjct: 1179 PGTKGDKGSKGEVGFPGLAGTPGIPGPKGEQGFMGPPGPQGQTGLPGAPGHPVEGPKGDR 1238

Query: 167  ------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                        G  GP G+PG +G +G KG  G+PG  G+ G     G+PG  G+PG  
Sbjct: 1239 GPQGQPGLPGLPGPMGPPGLPGLDGLKGEKGQPGWPGAPGVSGPK---GDPGFQGMPGIG 1295

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            G  GI G  G  G  G+PG  G  G  G+ G +G++G
Sbjct: 1296 GSPGITGSKGDMGPPGVPGFQGQKGLPGLQGIKGDQG 1332



 Score = 46.2 bits (108), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 82/199 (41%), Gaps = 66/199 (33%)

Query: 125 GAKGEMGVKGERGEKG--APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           G  G  G++G++GE G   PG+ G PG  GIPG  G+   KG++G P   G+PG++G  G
Sbjct: 720 GLPGSPGLQGQKGEPGIGLPGLKGLPGLPGIPGTPGE---KGNIGAP---GVPGEQGALG 773

Query: 183 P--------------------------------------------------KGDMGYPGR 192
           P                                                  KG+ G+PG 
Sbjct: 774 PPGLQGIRGDHGPPGLPGPAGSPGAPGVGPPGVRGPPGGQGPPGASGPPGIKGEKGFPGF 833

Query: 193 IGLD--------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            GLD        G  GLPG  G  G+PG  G  G PG  G PG  G  G  GT G+ G  
Sbjct: 834 PGLDMPGPKGDKGAQGLPGLTGQSGLPGLPGQQGTPGIPGFPGSKGEMGVMGTPGQPGSP 893

Query: 245 GPRGNRGKSGINGVPGTPA 263
           GP G+ G  G  G PG P 
Sbjct: 894 GPLGSPGLPGEKGDPGFPG 912



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 77/144 (53%), Gaps = 17/144 (11%)

Query: 127 KGEMGV--KGERGEKGAPGVVGPPGPQGIPG--------DEGKRGPKGDMGYPGPQGIPG 176
           KG+MG+  +G +G+KG  GV GPPG   +PG        D   +G KG  G PG QG+PG
Sbjct: 217 KGQMGLSFQGPKGDKGDQGVSGPPG---VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPG 273

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
             G++G  G  G  G+ G DG  G  G PG    PG +G  G+PG+ G  G+ G  G  G
Sbjct: 274 -VGEKGEPGKPGPRGKPGKDGEKGEKGSPGF---PGDSGYPGLPGRQGPQGEKGQAGPPG 329

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G    TGP G +G+ G  G PG
Sbjct: 330 PPGIVIGTGPLGEKGERGYPGAPG 353



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 69/147 (46%), Gaps = 41/147 (27%)

Query: 152 GIPGDEGKRGPKGDMGY-------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           G PG  G  GPKG+ G        PG  G+PG  G +GP+GD G+PG     GR GLPGE
Sbjct: 624 GSPGSPGLPGPKGEAGKVVPLPGPPGASGLPGSPGFQGPQGDRGFPG---TPGRPGLPGE 680

Query: 205 PG-----------------LDGIPG---------RNGMDGIPGKDGLPGKD-----GIPG 233
            G                 +DGIPG         R G +G+PG  GL G+      G+PG
Sbjct: 681 KGSVGQPGIGFPGPPGPKGVDGIPGDVGPPGSPGRPGFNGLPGSPGLQGQKGEPGIGLPG 740

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G+ G  G +G  G  GVPG
Sbjct: 741 LKGLPGLPGIPGTPGEKGNIGAPGVPG 767



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 58/122 (47%), Gaps = 35/122 (28%)

Query: 112 PGLQG--PIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           PG QG   +G+KGE G    +G+ G  GE+GEKG+PG                    GD 
Sbjct: 266 PGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGSPGF------------------PGDS 307

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GYP   G+PG +G +G KG  G P         G +G  G  G PG PGL G PG  G  
Sbjct: 308 GYP---GLPGRQGPQGEKGQAGPPGPPGIVIGTGPLGEKGERGYPGAPGLRGEPGPKGFP 364

Query: 218 GI 219
           GI
Sbjct: 365 GI 366


>gi|332832777|ref|XP_520208.3| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(XXVII) chain [Pan
            troglodytes]
          Length = 1900

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 105/212 (49%), Gaps = 44/212 (20%)

Query: 116  GPIGQKGEIGAKGEMGVKG-------------------------ERGEKGAPGVVGPPGP 150
            GP G  G +GA+GE G+ G                         +RG++G PG  G PG 
Sbjct: 1349 GPTGVPGRMGAQGEPGLAGYDGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQ 1408

Query: 151  QGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            +G+      PG +G+ G  G  G PGP+G  G EG +G +G  G PGR G+ G  GLPG 
Sbjct: 1409 EGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGSEGPKGKQGKAGAPGRRGVQGLQGLPGP 1468

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSGINGVPGT 261
                G+ GR G++GI G DGLPG+DG  G  G    +G+ G  GP G RG  G+ G+PG 
Sbjct: 1469 ---RGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGA 1525

Query: 262  PAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
                 +K ES   LP       L PP   G+E
Sbjct: 1526 QGPPGFKGESG--LPGQ-----LGPPGKRGTE 1550



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 86/176 (48%), Gaps = 18/176 (10%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP G+ G  G+KG  G KG++G+ GAPG  G  G QG+PG  
Sbjct: 1410 GVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGSEGPKGKQGKAGAPGRRGVQGLQGLPGPR 1469

Query: 158  GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G +G  G  GP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 1470 GVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1529

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G  G+PG+    G PGK G  G+ G+PG  G  G KG  G  G  G  G+ G+
Sbjct: 1530 GFKGESGLPGQL---GPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGL 1582



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 89/175 (50%), Gaps = 30/175 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDE--------- 157
            G +GP G++G+ GA G  GV+G +G  G  GVVG        GP G+PG +         
Sbjct: 1440 GSEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQ 1499

Query: 158  ------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                        GKRG  G  G PG QG PG +G+ G  G +G PG+ G +GR GLP   
Sbjct: 1500 GDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLPGNQ 1559

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G
Sbjct: 1560 GEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVG 1614



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG +GPPG         KRG +G  G 
Sbjct: 1505 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGRTGL 1555

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 1556 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGP 1615

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1616 LGILGPSGLPGPKGDKGSRGDWG 1638



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 42/191 (21%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KG +G+ GE G+KG++GE+G PGV       G PG +G +G +G  G+PG
Sbjct: 829  PIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGV------SGDPGFQGDKGSQGLPGFPG 882

Query: 171  PQGIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             +G PG  GK G KG               D+G PG    +G +G+ G+PG  G+PG  G
Sbjct: 883  ARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGD---NGPEGMKGKPGARGLPGPRG 939

Query: 216  ------------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                              ++G PG+ G PG+ G+ G  G  G+ G  GP G +G  G  G
Sbjct: 940  QLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIG 999

Query: 258  VPGTPAICAYK 268
            + G P I   K
Sbjct: 1000 LVGEPGIVGEK 1010



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 83/163 (50%), Gaps = 18/163 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+QG  G+ G+ G  G  G +G  G KG+ G  GP G QG  G  G+RG +G  G PGP+
Sbjct: 1410 GVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGSEGPKGKQGKAGAPGRRGVQGLQGLPGPR 1469

Query: 173  GIPGDEGKRGPKGDMGYPGR---------------IGLDGRDGLPGEPGLDGIPGRNGMD 217
            G+ G +G  G  G  G PGR                G  G  G  G PG+ G+PG  G  
Sbjct: 1470 GVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1529

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ GLPG+ G PG  GT G  G+    GN+G+ G  G PG
Sbjct: 1530 GFKGESGLPGQLGPPGKRGTEGRTGLP---GNQGEPGSKGQPG 1569



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 78/186 (41%), Gaps = 46/186 (24%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVV------------------------GPPGPQGIPGD 156
            +G  G  G+ G KG  G KGA G                          G  GP G+PG 
Sbjct: 1297 RGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGVPGR 1356

Query: 157  EGKRGPKGDMGYPGPQGIPG----------------DEGKRGPKGDMGYPGRIGLD---- 196
             G +G  G  GY G QG  G                D G RG  GD GYPG+ G+     
Sbjct: 1357 MGAQGEPGLAGYDGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRG 1416

Query: 197  --GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              G+ G PG PG  G PG  G  G  G  G  GK G PG  G  G +G+ GPRG  G+ G
Sbjct: 1417 KPGQQGQPGHPGPRGRPGPKGSKGSEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQG 1476

Query: 255  INGVPG 260
            + G+ G
Sbjct: 1477 LEGIAG 1482



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 82/176 (46%), Gaps = 27/176 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
           PGL G  G  GE G  G  G +G+ G  G PGV G  GP G+ G+ G+ G          
Sbjct: 761 PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGL 820

Query: 164 -GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGI 219
            GD+G  GP G PG +G +G  G +G PG  G  G  G+P   G+PG  G  G  G+ G 
Sbjct: 821 IGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSQGLPGF 880

Query: 220 PGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKSGINGVPG 260
           PG  G PG  G  G  G+                G  G  GP G +GK G  G+PG
Sbjct: 881 PGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPG 936



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 91/222 (40%), Gaps = 64/222 (28%)

Query: 100  QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
            QG      E   PGL+G   P+G  G  G +G+ G  GE GEKG  G++           
Sbjct: 1237 QGLIGQRGE---PGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGV 1293

Query: 146  ----GPPGPQGIPGDEGKRGPKGDMGYP---------------------------GPQGI 174
                GP G  G  G++G+ G KG  GY                            GP G+
Sbjct: 1294 TGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGV 1353

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRD----------------GLPGEPGLDGIPGRNGMDG 218
            PG  G +G  G  GY G  G DG+                 G  GEPG  G PG+ G+ G
Sbjct: 1354 PGRMGAQGEPGLAGYDGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQG 1413

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            + GK G  G+ G PG  G  G KG  G  G +GK G  G PG
Sbjct: 1414 LRGKPGQQGQPGHPGPRGRPGPKGSKGSEGPKGKQGKAGAPG 1455



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 91/226 (40%), Gaps = 76/226 (33%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 1216 PGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGE 1275

Query: 169  PGPQGI------------------------PGDEGKRGPKGDMGYPGRI----------- 193
             G +G+                         G++G+ G KG  GY G++           
Sbjct: 1276 KGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGP 1335

Query: 194  ----------------GLDGRDGLPGEPGLDGIPGRNGMDGI------------------ 219
                            G+ GR G  GEPGL G  G  G DG                   
Sbjct: 1336 PGTPGPKGSRGSLGPTGVPGRMGAQGEPGLAGYDGEQGEDGKAEGPPGPPGDRGPVGDRG 1395

Query: 220  ----PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                PG  G PG++G+ G  G  G++G  G  G RG+ G  G  G+
Sbjct: 1396 DRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGS 1441



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 69/143 (48%), Gaps = 27/143 (18%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           RG    PG +G PG  G+PG +G+R      G +G MG P   G PG  G+RGP G  G 
Sbjct: 749 RGAGLLPGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMP---GFPGVFGERGPPGLDGN 805

Query: 190 PGR---------------IGLDGRDGLPGEPGLDGI---PGRNGMDGIPGKDGLPGKDGI 231
           PG                +G+ G  G PG  G+ G+    G  G+ G  G+ G+PG  G 
Sbjct: 806 PGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGD 865

Query: 232 PGTNGTNGEKGMTGPRGNRGKSG 254
           PG  G  G +G+ G  G RGK G
Sbjct: 866 PGFQGDKGSQGLPGFPGARGKPG 888



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 54/101 (53%), Gaps = 12/101 (11%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G+ G  G +GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 1540 QLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQG 1599

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLD 196
             RGP G MG     GP GI G  G  GPKGD G  G  GL 
Sbjct: 1600 PRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGLQ 1640



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 75/179 (41%), Gaps = 48/179 (26%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDMGYPGP 171
            +G KG  GA GE G+ GE G KG  G      P G PG++      G+ G +GD G  GP
Sbjct: 1204 MGPKGPPGAVGEPGLPGEAGMKGDLG------PLGTPGEQGLIGQRGEPGLEGDSGPMGP 1257

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRD------------GLPGEPGLDGIPGRNGMDGI 219
             G+ GD G  GP G+ G  G+ GL G D            G  G+ G  G  GR G  G 
Sbjct: 1258 DGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGA 1317

Query: 220  PGKDGLPGK------------------------DGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G+                         G+PG  G  GE G+ G  G +G+ G
Sbjct: 1318 KGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGVPGRMGAQGEPGLAGYDGEQGEDG 1376



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 27/118 (22%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G +G PG  G+PG +G+RG       PG  G  G+ G+PG PG+ G  G  G+DG PG+ 
Sbjct: 756 GYIGLPGLFGLPGSDGERG------LPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGEL 809

Query: 224 ---------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                                G PG  G+ G  G+ GE G+ G +G +G  G++G PG
Sbjct: 810 GLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 867



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 59/96 (61%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG  GP G KG+ GA+G  G +G+ G +G  G +GPPG  G+ G  G++G  G  G  G
Sbjct: 916  PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDG 975

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             +G PGD G+ GP G+ G+ G IGL G  G+ GE G
Sbjct: 976  VKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKG 1011



 Score = 42.7 bits (99), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G+ G PG+ G PGP   PG +G +G  G  G+PG QG+PG  G
Sbjct: 619 QKGDPGLSPGKAHDGAKGDMGLPGLSGNPGP---PGRKGHKGYPGPAGHPGEQGLPGPVG 675

Query: 180 KRGPKG 185
             GPKG
Sbjct: 676 DPGPKG 681



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 51/115 (44%), Gaps = 30/115 (26%)

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMD 217
            GPKG  G  G  G+PG+ G    KGD+G           G PGE GL    G PG  G  
Sbjct: 1205 GPKGPPGAVGEPGLPGEAGM---KGDLGP---------LGTPGEQGLIGQRGEPGLEGDS 1252

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTG---------------PRGNRGKSGING 257
            G  G DGL G  G PG +G +GEKG  G                RG  GKSG  G
Sbjct: 1253 GPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQG 1307



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 184 KGDMGY-PGRI--GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           KGD G  PG+   G  G  GLPG  G  G PGR G  G PG  G PG+ G+PG  G  G 
Sbjct: 620 KGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGLPGPVGDPGP 679

Query: 241 KG 242
           KG
Sbjct: 680 KG 681


>gi|152031574|sp|P02457.3|CO1A1_CHICK RecName: Full=Collagen alpha-1(I) chain; AltName: Full=Alpha-1 type
           I collagen; Flags: Precursor
          Length = 1453

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/147 (47%), Positives = 81/147 (55%), Gaps = 9/147 (6%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G  GE GA G  G  G +GE G  GV GPPGP G   +EGKRG +G+   PG
Sbjct: 412 PSGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAG---EEGKRGARGE---PG 465

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           P G+PG  G+RG  G  G+PG  G+ G  G PGE    G PG  G  G PG+ G PG+ G
Sbjct: 466 PAGLPGPAGERGAPGSRGFPGADGIAGPKGPPGE---RGSPGAVGPKGSPGEAGRPGEAG 522

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
           +PG  G  G  G  GP G  G  G  G
Sbjct: 523 LPGAKGLTGSPGSPGPDGKTGPPGPAG 549



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 89/175 (50%), Gaps = 7/175 (4%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ GAKG  G  G  G  G PG  GP GPQG  G  G +G  G+ G PG +G  G +G+ 
Sbjct: 381 GQPGAKGATGAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNSGEPGAPGNKGDTGAKGEP 440

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP G  G PG  G +G+ G  GEPG  G+PG  G  G PG  G PG DGI G  G  GE+
Sbjct: 441 GPAGVQGPPGPAGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGADGIAGPKGPPGER 500

Query: 242 ---GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
              G  GP+G+ G++G  G  G P          S  P+ +T     PP   G +
Sbjct: 501 GSPGAVGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTG----PPGPAGQD 551



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 82/176 (46%), Gaps = 21/176 (11%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G   +  E  P G+QGP G  GE G +G  G  G  G  G  G  G PG +G PG +G 
Sbjct: 431 KGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGADGI 490

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            GPK   G PG +G PG  G +G  G+ G PG  GL G  GL G PG  G  G+ G  G 
Sbjct: 491 AGPK---GPPGERGSPGAVGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGP 547

Query: 220 PGKD------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G+D                  G PG  G  G  G  GE+G  GP G  G +G +G
Sbjct: 548 AGQDGRPGPAGPPGARGQAGVMGFPGPKGAAGEPGKPGERGAPGPPGAVGAAGKDG 603



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 101/257 (39%), Gaps = 90/257 (35%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGP--- 147
              +G   +  E  P GL GP G++G  G++G  G       KG  GE+G+PG VGP   
Sbjct: 452 AGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGADGIAGPKGPPGERGSPGAVGPKGS 511

Query: 148 ------------PGPQGI------PGDEGKRGPKGD---------------------MGY 168
                       PG +G+      PG +GK GP G                      MG+
Sbjct: 512 PGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPAGPPGARGQAGVMGF 571

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---------------GEPGLDGIPGR 213
           PGP+G  G+ GK G +G  G PG +G  G+DG                 GE G  G PG 
Sbjct: 572 PGPKGAAGEPGKPGERGAPGPPGAVGAAGKDGEAGAQGPPGPTGPAGERGEQGPAGAPGF 631

Query: 214 NGMDGI---------PGKDGLPGKDGIPGTNGTNGEKGMTGPR----------------- 247
            G+ G          PG+ G+PG  G PG  G  GE+G  G R                 
Sbjct: 632 QGLPGPAGPPGEAGKPGEQGVPGNAGAPGPAGARGERGFPGERGVQGPPGPQGPRGANGA 691

Query: 248 -GNRGKSGINGVPGTPA 263
            GN G  G  G PG P 
Sbjct: 692 PGNDGAKGDAGAPGAPG 708



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 82/179 (45%), Gaps = 36/179 (20%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGKRGPKGD 165
           +G  G  GA GE G  GERG  G PG VG  G  G              G+ G++GP G 
Sbjct: 569 MGFPGPKGAAGEPGKPGERGAPGPPGAVGAAGKDGEAGAQGPPGPTGPAGERGEQGPAGA 628

Query: 166 MGY---------------PGPQGIPGDEGKRGP---KGDMGYPGR------IGLDGRDGL 201
            G+               PG QG+PG+ G  GP   +G+ G+PG        G  G  G 
Sbjct: 629 PGFQGLPGPAGPPGEAGKPGEQGVPGNAGAPGPAGARGERGFPGERGVQGPPGPQGPRGA 688

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG DG  G  G  G PG +G PG +G+PG  G  G  G  G RG+ G  G +G PG
Sbjct: 689 NGAPGNDGAKGDAGAPGAPGNEGPPGLEGMPGERGAAGLPGAKGDRGDPGPKGADGAPG 747



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 83/184 (45%), Gaps = 48/184 (26%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV---------------KGERGEKG 140
           ++   G   +  E   PG +G  G  G +GA G+ G                +GE+G  G
Sbjct: 568 VMGFPGPKGAAGEPGKPGERGAPGPPGAVGAAGKDGEAGAQGPPGPTGPAGERGEQGPAG 627

Query: 141 APGVVG------------PPGPQGIPGDEGKRGP---KGDMGYPGPQ------------- 172
           APG  G             PG QG+PG+ G  GP   +G+ G+PG +             
Sbjct: 628 APGFQGLPGPAGPPGEAGKPGEQGVPGNAGAPGPAGARGERGFPGERGVQGPPGPQGPRG 687

Query: 173 --GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPG 227
             G PG++G +G  G  G PG  G  G +G+PGE G  G+PG  G  G P   G DG PG
Sbjct: 688 ANGAPGNDGAKGDAGAPGAPGNEGPPGLEGMPGERGAAGLPGAKGDRGDPGPKGADGAPG 747

Query: 228 KDGI 231
           KDG+
Sbjct: 748 KDGL 751



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 88/212 (41%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGY 168
           PG++G  G  G  GAKG+ G  G +GE G+PG  G PG   P+G+PG+ G+ GP G  G 
Sbjct: 251 PGMKGHRGFSGLDGAKGQPGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGA 310

Query: 169 ---------------------------------PGPQGIPGDEGKRGPKGDM-------- 187
                                             GPQG  G EG +G +G+         
Sbjct: 311 RGNDGAPGAAGPPGPTGPAGPPGFPGAAGAKGETGPQGARGSEGPQGSRGEPGPPGPAGA 370

Query: 188 ----------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
                     G PG  G  G  G+ G PG    PG  G  G  G  G PG  G  G  G 
Sbjct: 371 AGPAGNPGADGQPGAKGATGAPGIAGAPGF---PGARGPSGPQGPSGAPGPKGNSGEPGA 427

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG TG +G  G +G+ G PG PA    KR
Sbjct: 428 PGNKGDTGAKGEPGPAGVQGPPG-PAGEEGKR 458



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 67/151 (44%), Gaps = 36/151 (23%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  GE G+ G PG  GPPGPQG              G PG  G+PG +G RG  G  G  
Sbjct: 219 GDDGEAGKPGRPGQRGPPGPQGA------------RGLPGTAGLPGMKGHRGFSGLDGAK 266

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------------ 238
           G+ G  G  G PG PG +G PG+ G  G+PG+ G PG  G  G  G +            
Sbjct: 267 GQPGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGARGNDGAPGAAGPPGPT 326

Query: 239 ------------GEKGMTGPRGNRGKSGING 257
                       G KG TGP+G RG  G  G
Sbjct: 327 GPAGPPGFPGAAGAKGETGPQGARGSEGPQG 357



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 80/228 (35%), Gaps = 72/228 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG----------------- 155
           G  GP G KGE G+ GE G  G+ G +G PG  G PGP G  G                 
Sbjct: 267 GQPGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGARGNDGAPGAAGPPGPT 326

Query: 156 -------------DEGKRGPKGDMGYPGPQG----------------------------- 173
                         +G+ GP+G  G  GPQG                             
Sbjct: 327 GPAGPPGFPGAAGAKGETGPQGARGSEGPQGSRGEPGPPGPAGAAGPAGNPGADGQPGAK 386

Query: 174 -------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                         PG  G  GP+G  G PG  G  G  G PG  G  G  G  G  G+ 
Sbjct: 387 GATGAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAGVQ 446

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G++G  G  G  G  G+ GP G RG  G  G PG   I   K
Sbjct: 447 GPPGPAGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGADGIAGPK 494



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 80/198 (40%), Gaps = 54/198 (27%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG  G  G  G  G  G +G  G  GA G  GP GP+G PG  G+ G  G MG   
Sbjct: 235 PPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGQPGPAGPKGEPGSPGENGAPGQMG--- 291

Query: 171 PQGIPGDEGKRGP------------------------------------KGDMGYPGRIG 194
           P+G+PG+ G+ GP                                    KG+ G  G  G
Sbjct: 292 PRGLPGERGRPGPSGPAGARGNDGAPGAAGPPGPTGPAGPPGFPGAAGAKGETGPQGARG 351

Query: 195 LDGRDGLPGE---------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            +G  G  GE               PG DG PG  G  G PG  G PG  G  G +G  G
Sbjct: 352 SEGPQGSRGEPGPPGPAGAAGPAGNPGADGQPGAKGATGAPGIAGAPGFPGARGPSGPQG 411

Query: 240 EKGMTGPRGNRGKSGING 257
             G  GP+GN G+ G  G
Sbjct: 412 PSGAPGPKGNSGEPGAPG 429



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 49/107 (45%), Positives = 61/107 (57%), Gaps = 3/107 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ G  G  G  GA+GE G  GERG +G PG  GP G  G PG++G +G  G  G PG +
Sbjct: 651 GVPGNAGAPGPAGARGERGFPGERGVQGPPGPQGPRGANGAPGNDGAKGDAGAPGAPGNE 710

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           G PG EG  G +G  G PG     G  G PG  G DG PG++G+ G+
Sbjct: 711 GPPGLEGMPGERGAAGLPG---AKGDRGDPGPKGADGAPGKDGLRGL 754



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNR 250
           G DG  G PG PG  G PG  G  G+PG  GLP   G  G  G +G  G+ G  GP+G  
Sbjct: 219 GDDGEAGKPGRPGQRGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGQPGPAGPKGEP 278

Query: 251 GKSGINGVPG 260
           G  G NG PG
Sbjct: 279 GSPGENGAPG 288



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 50/101 (49%), Gaps = 12/101 (11%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           GD G  G  G PG  G  GP+G  G PG  GL         PG+ G  G +G+DG  G+ 
Sbjct: 219 GDDGEAGKPGRPGQRGPPGPQGARGLPGTAGL---------PGMKGHRGFSGLDGAKGQP 269

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGT 261
           G  G  G PG+ G NG  G  GPR   G RG+ G +G  G 
Sbjct: 270 GPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGA 310



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 27/98 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
            PG  GP G  G+   +G +G+ G+RGE+G PG+   PGP G PG +G  G          
Sbjct: 935  PGTPGPQGIAGQ---RGVVGLPGQRGERGFPGL---PGPSGEPGKQGPSGASGERGPPGP 988

Query: 164  -------------GDMGYPGPQGIPGDEGKRGPKGDMG 188
                         G  G PG +G PG +G  GPKGD G
Sbjct: 989  MGPPGLAGPPGEAGREGAPGAEGAPGRDGAAGPKGDRG 1026



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 74/184 (40%), Gaps = 48/184 (26%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---------KRGPKGDMG- 167
            +G  G  GA+G  G  G  G  GA G VGPPGP G  G  G          +GP+G+ G 
Sbjct: 845  VGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNIGLPGPPGPAGKZGSKGPRGETGP 904

Query: 168  -----------------------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                                     GP G PG  G +G  G  G  G  G  G  G PG 
Sbjct: 905  AGRPGEPGPAGPPGPPGEKGSPGADGPIGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL 964

Query: 205  PGLDGIPGRNGMDGIPGKDGL---------------PGKDGIPGTNGTNGEKGMTGPRGN 249
            PG  G PG+ G  G  G+ G                 G++G PG  G  G  G  GP+G+
Sbjct: 965  PGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGEAGREGAPGAEGAPGRDGAAGPKGD 1024

Query: 250  RGKS 253
            RG++
Sbjct: 1025 RGET 1028


>gi|13560506|gb|AAK30079.1|AF336819_1 collagen-like protein B [Streptococcus pyogenes]
          Length = 465

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 93/152 (61%), Gaps = 12/152 (7%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDE 157
           G   +T    P G +G  G+KG+ G KG  G  G RGEKG PG     GP GPQG  G  
Sbjct: 215 GEKGATGPAGPRGEKGDPGEKGDPGEKGATGPAGPRGEKGDPGERGATGPAGPQGPAGQA 274

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           GK G +G +G  G QG  G++G++GP      +G +G  G+ G +G+DGLPG+   DG  
Sbjct: 275 GKDGERGPVGPAGKQGERGEKGEQGPAGKDGERGPVGPAGKDGQNGKDGLPGK---DGKD 331

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           G++G DG+PGKDG  GKDG+PG +G +G+ G+
Sbjct: 332 GQDGKDGLPGKDGQDGKDGLPGKDGQDGKDGL 363



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 95/181 (52%), Gaps = 36/181 (19%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      E   PG +G  G+KG  G  G  G KG+ GE+GA G  GP GP G  G +G+R
Sbjct: 221 GPAGPRGEKGDPGEKGDPGEKGATGPAGPRGEKGDPGERGATGPAGPQGPAGQAGKDGER 280

Query: 161 GP------KGDMGYPGPQGIPGDEGKRGP---------KGDMGYPGRIG---LDGRDGLP 202
           GP      +G+ G  G QG  G +G+RGP          G  G PG+ G    DG+DGLP
Sbjct: 281 GPVGPAGKQGERGEKGEQGPAGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQDGKDGLP 340

Query: 203 G---EPGLDGIPGRNGMDG---------------IPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G   + G DG+PG++G DG               +PGKDG  GKDG+PG +G +G+ G+ 
Sbjct: 341 GKDGQDGKDGLPGKDGQDGKDGLPGKDGKDGKDGLPGKDGQDGKDGLPGKDGQDGKDGLP 400

Query: 245 G 245
           G
Sbjct: 401 G 401



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 94/185 (50%), Gaps = 30/185 (16%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G   +T +  P G +G  G+KG  G  G  G KG+ GEKGA G  GP G +G PG++G  
Sbjct: 179 GEKGATGQVGPRGEKGDPGEKGATGPAGPRGEKGDPGEKGATGPAGPRGEKGDPGEKGDP 238

Query: 161 GPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLD--------------------- 196
           G KG  G  GP+G  GD G+R   GP G  G  G+ G D                     
Sbjct: 239 GEKGATGPAGPRGEKGDPGERGATGPAGPQGPAGQAGKDGERGPVGPAGKQGERGEKGEQ 298

Query: 197 ---GRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
              G+DG  G  G  G  G+NG DG+P   GKDG  GKDG+PG +G +G+ G+ G  G  
Sbjct: 299 GPAGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGQDGKDGLPGKDGQD 358

Query: 251 GKSGI 255
           GK G+
Sbjct: 359 GKDGL 363



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 92/176 (52%), Gaps = 12/176 (6%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGI 153
           V  +G      E    G  GP G+KG+ G KG  G  G RGEKG PG     GP GP+G 
Sbjct: 151 VGPRGEKGDPGEKGATGPAGPRGEKGDPGEKGATGQVGPRGEKGDPGEKGATGPAGPRGE 210

Query: 154 PGDEGKRG------PKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGE 204
            GD G++G      P+G+ G PG +G PG++G     GP+G+ G PG  G  G  G  G 
Sbjct: 211 KGDPGEKGATGPAGPRGEKGDPGEKGDPGEKGATGPAGPRGEKGDPGERGATGPAGPQGP 270

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G  G  GK G  G+ G  G  G +GE+G  GP G  G++G +G+PG
Sbjct: 271 AGQAGKDGERGPVGPAGKQGERGEKGEQGPAGKDGERGPVGPAGKDGQNGKDGLPG 326



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/167 (44%), Positives = 87/167 (52%), Gaps = 10/167 (5%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKG 164
           E   PG +G  G++G  G  G  G KG+ GEKGA G VGP G +G PG++G     GP+G
Sbjct: 114 EKGDPGEKGDPGERGATGQVGPRGEKGDPGEKGATGQVGPRGEKGDPGEKGATGPAGPRG 173

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           + G PG +G  G  G RG KGD G  G     G  G  G PGE G  G  G  G  G PG
Sbjct: 174 EKGDPGEKGATGQVGPRGEKGDPGEKGATGPAGPRGEKGDPGEKGATGPAGPRGEKGDPG 233

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           + G PG+ G  G  G  GEKG  G RG  G +G  G    PA  A K
Sbjct: 234 EKGDPGEKGATGPAGPRGEKGDPGERGATGPAGPQG----PAGQAGK 276



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 83/166 (50%), Gaps = 12/166 (7%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G   +T +  P G +G  G+KG  G  G  G KG+ GEKGA G VGP G +G PG++G  
Sbjct: 143 GEKGATGQVGPRGEKGDPGEKGATGPAGPRGEKGDPGEKGATGQVGPRGEKGDPGEKGAT 202

Query: 161 GP------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GP            KG  G  GP+G  GD G++G  G+ G  G  G  G  G PGE G  
Sbjct: 203 GPAGPRGEKGDPGEKGATGPAGPRGEKGDPGEKGDPGEKGATGPAGPRGEKGDPGERGAT 262

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G  G  G  GKDG  G  G  G  G  GEKG  GP G  G+ G
Sbjct: 263 GPAGPQGPAGQAGKDGERGPVGPAGKQGERGEKGEQGPAGKDGERG 308



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 82/160 (51%), Gaps = 6/160 (3%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--- 157
           G   +T +  P G +G  G+KG  G  G  G KG+ GEKGA G  GP G +G PG++   
Sbjct: 125 GERGATGQVGPRGEKGDPGEKGATGQVGPRGEKGDPGEKGATGPAGPRGEKGDPGEKGAT 184

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G+ GP+G+ G PG +G  G  G RG KGD G  G  G  G  G  G+PG  G PG  G  
Sbjct: 185 GQVGPRGEKGDPGEKGATGPAGPRGEKGDPGEKGATGPAGPRGEKGDPGEKGDPGEKGAT 244

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G     G+ G PG  G  G  G  GP G  GK G  G
Sbjct: 245 GPAGPR---GEKGDPGERGATGPAGPQGPAGQAGKDGERG 281



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 74/143 (51%), Gaps = 18/143 (12%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGYPGPQGIPGDEGK 180
            G KG+ G KG+ GE+GA G VGP G +G PG++G   + GP+G+ G PG +G  G  G 
Sbjct: 112 AGEKGDPGEKGDPGERGATGQVGPRGEKGDPGEKGATGQVGPRGEKGDPGEKGATGPAGP 171

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           RG KGD               PGE G  G  G  G  G PG+ G  G  G  G  G  GE
Sbjct: 172 RGEKGD---------------PGEKGATGQVGPRGEKGDPGEKGATGPAGPRGEKGDPGE 216

Query: 241 KGMTGPRGNRGKSGINGVPGTPA 263
           KG TGP G RG+ G  G  G P 
Sbjct: 217 KGATGPAGPRGEKGDPGEKGDPG 239



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 63/134 (47%), Gaps = 18/134 (13%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GEKG PG  G PG +G     G+ GP+G+ G PG +G  G  G RG KGD          
Sbjct: 113 GEKGDPGEKGDPGERGA---TGQVGPRGEKGDPGEKGATGQVGPRGEKGD---------- 159

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                PGE G  G  G  G  G PG+ G  G+ G  G  G  GEKG TGP G RG+ G  
Sbjct: 160 -----PGEKGATGPAGPRGEKGDPGEKGATGQVGPRGEKGDPGEKGATGPAGPRGEKGDP 214

Query: 257 GVPGTPAICAYKRE 270
           G  G       + E
Sbjct: 215 GEKGATGPAGPRGE 228



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 63/143 (44%), Gaps = 42/143 (29%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            P G QGP GQ G+ G +G +G  G++GE+G  G  GP    G  G+ G  GP G  G  
Sbjct: 263 GPAGPQGPAGQAGKDGERGPVGPAGKQGERGEKGEQGP---AGKDGERGPVGPAGKDGQN 319

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-------------------------- 203
           G  G+PG +GK G  G  G PG+ G DG+DGLPG                          
Sbjct: 320 GKDGLPGKDGKDGQDGKDGLPGKDGQDGKDGLPGKDGQDGKDGLPGKDGKDGKDGLPGKD 379

Query: 204 -------------EPGLDGIPGR 213
                        + G DG+PG+
Sbjct: 380 GQDGKDGLPGKDGQDGKDGLPGK 402


>gi|194225670|ref|XP_001916612.1| PREDICTED: collagen alpha-1(XXVII) chain [Equus caballus]
          Length = 1763

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 93/172 (54%), Gaps = 19/172 (11%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            G +GE G  G  G++G  G+ G PG QG+PG  G RG       PGP+G  G+EG +G +
Sbjct: 1351 GDRGEPGDPGYPGQEGVQGLRGNPGQQGLPGHPGPRG------RPGPKGSKGEEGPKGKQ 1404

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEK 241
            G  G PGR G+ G  GLPG     G+ GR G +G+ G DGLPG+DG     G  G +G+ 
Sbjct: 1405 GKAGAPGRRGIQGLQGLPGP---RGVVGRQGPEGVAGPDGLPGRDGPVGQQGEQGDDGDP 1461

Query: 242  GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
            G  GP G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 1462 GPMGPAGKRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1506



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 96/177 (54%), Gaps = 6/177 (3%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG   +  +   PG  GP G+ G  G+KGE G KG++G+ GAPG  G  G QG+PG  
Sbjct: 1366 GVQGLRGNPGQQGLPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPGRRGIQGLQGLPGPR 1425

Query: 158  GKRGPKGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIP 211
            G  G +G  G  GP G+PG +   G++G +GD G PG +G  G+ G PG    PG  G P
Sbjct: 1426 GVVGRQGPEGVAGPDGLPGRDGPVGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1485

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G+PG+ G PGK G  G  G  G +G  G +G  G SG  G PG   +   K
Sbjct: 1486 GFKGESGLPGQLGPPGKRGTEGGTGLPGTQGEPGSKGQPGDSGEMGFPGMAGLFGPK 1542



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 86/152 (56%), Gaps = 12/152 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEGK 159
            PG  GP+GQ+GE G  G+ G  G  G++G PGV G PG QG PG              GK
Sbjct: 1443 PGRDGPVGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGK 1502

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            RG +G  G PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+
Sbjct: 1503 RGTEGGTGLPGTQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGL 1562

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             GK+G+ G  GI G +G  G KG  G +G+ G
Sbjct: 1563 MGKEGIIGPLGILGPSGRPGPKGDKGSQGDLG 1594



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 81/171 (47%), Gaps = 21/171 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G  G  G KG  G  G  GE+G PG  G PG +G PG +G  GP GD G  G 
Sbjct: 710 PGLSGNPGPLGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGS 769

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------------------GI 210
           +G+PG  GKRG  G  G+PG  G  G  GL G PG                       G 
Sbjct: 770 RGLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGELGLPGPPGVPGLMGDMGVLGPIGY 829

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG  GM G+ G  G PG  G  G  G  G  G TG +G++G  G+ G PG 
Sbjct: 830 PGPKGMKGLMGSMGEPGLKGDKGEQGVPGVSGDTGFQGDKGSQGLPGFPGA 880



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 83/163 (50%), Gaps = 33/163 (20%)

Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GAKG+MG+ G          +G KG PG  G PG QG PG EG  G KG   YPG QG+P
Sbjct: 702 GAKGDMGLPGLSGNPGPLGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKG---YPGRQGLP 758

Query: 176 GDEGKRGPKGDMGY---PGRIGLDGRDGLPGE------PGLDGIPGRN------------ 214
           G  G  GPKG  G    PG+ G  GR G PG+      PGLDG PG              
Sbjct: 759 GPVGDPGPKGSRGLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGELGLPGPPGVPGLM 818

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G+ G  G PG  G+ G  G+ GE G+ G +G +G  G++G
Sbjct: 819 GDMGVLGPIGYPGPKGMKGLMGSMGEPGLKGDKGEQGVPGVSG 861



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 86/178 (48%), Gaps = 33/178 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KG +G+ GE G+KG++GE+G PGV G  G QG  G +G  G  G  G PGP 
Sbjct: 828  GYPGPKGMKGLMGSMGEPGLKGDKGEQGVPGVSGDTGFQGDKGSQGLPGFPGARGKPGPL 887

Query: 173  GIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLPGEPG----------- 206
            G  GD+G                 GP GD G  G  G  G  GLPG  G           
Sbjct: 888  GRVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPRGHLGPEGDEGPM 947

Query: 207  -------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                   L+G PGR G  G PG DGL G+ G PG  G  GE+G+ G  G  G+ GI G
Sbjct: 948  GPPGAPGLEGQPGRKGFPGRPGPDGLKGEPGSPGRPGPVGEQGLLGFIGLVGEPGIMG 1005



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/127 (43%), Positives = 67/127 (52%), Gaps = 12/127 (9%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++
Sbjct: 687 GQKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPLGR---------KGHKGYPGPAGHPGEQ 737

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G+ GP+G    PG  G  GR GLPG  G  G  G  G+ G+PGK G  G+ G PG  G  
Sbjct: 738 GQPGPEGS---PGAKGYPGRQGLPGPVGDPGPKGSRGLPGVPGKRGKMGRPGFPGDFGER 794

Query: 239 GEKGMTG 245
           G  G+ G
Sbjct: 795 GPPGLDG 801



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 82/190 (43%), Gaps = 54/190 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK--------- 163
           GL GP+G  G  G++G  GV G+RG+ G PG          PGD G+RGP          
Sbjct: 756 GLPGPVGDPGPKGSRGLPGVPGKRGKMGRPG---------FPGDFGERGPPGLDGNPGEL 806

Query: 164 ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                       GDMG  GP G PG +G +G  G MG PG  G  G  G+PG  G  G  
Sbjct: 807 GLPGPPGVPGLMGDMGVLGPIGYPGPKGMKGLMGSMGEPGLKGDKGEQGVPGVSGDTGFQ 866

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------------------TGPRGNR 250
           G  G  G+P   G PG  G PG  G  G+KG                       GP G +
Sbjct: 867 GDKGSQGLP---GFPGARGKPGPLGRVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMK 923

Query: 251 GKSGINGVPG 260
           GK G  G+PG
Sbjct: 924 GKPGARGLPG 933



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 95/212 (44%), Gaps = 27/212 (12%)

Query: 81   HNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGVKGERG 137
            H+ P  +            +G         P GL GP   +G KG  GA GE G+ GE G
Sbjct: 1102 HSGPRGFPGIPGPSGPPGTKGLPGEPGPQGPQGLIGPPGEMGPKGPPGAVGEPGLPGEAG 1161

Query: 138  EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
             KG  G +G PG QG+ G  G+ G +GD G  GP G+ GD G  GP G+ G  G+ GL G
Sbjct: 1162 MKGDLGPLGTPGEQGLIGQRGEPGLEGDSGSAGPDGLKGDRGDPGPDGERGEKGQEGLKG 1221

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE----------------- 240
             DG PG PG+ GI    G +G PGK G  G+ G  G  G  G+                 
Sbjct: 1222 EDGPPGPPGITGI---RGPEGKPGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPG 1278

Query: 241  ----KGMTGPRGNRGKSGINGVPGTPAICAYK 268
                +G  GP G  G+ G  G PG      +K
Sbjct: 1279 PKGSRGSLGPTGAPGRMGAQGEPGLAGYEGHK 1310



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 50/103 (48%), Gaps = 18/103 (17%)

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G KGDMG PG  G PG  G+   KG  GYPG  G  G  G PG             +G P
Sbjct: 702 GAKGDMGLPGLSGNPGPLGR---KGHKGYPGPAGHPGEQGQPGP------------EGSP 746

Query: 221 GKDGLPGKDGIPGT---NGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G PG+ G+PG     G  G +G+ G  G RGK G  G PG
Sbjct: 747 GAKGYPGRQGLPGPVGDPGPKGSRGLPGVPGKRGKMGRPGFPG 789



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 94/233 (40%), Gaps = 90/233 (38%)

Query: 112  PGLQGPIGQKGE------IGAKGEMGVKGERGE--------------------------- 138
            PG  GP+G++G       +G  G MG KG+RG                            
Sbjct: 980  PGRPGPVGEQGLLGFIGLVGEPGIMGEKGDRGMVGPPGVPGPKGSMGHPGMPGGVGTPGE 1039

Query: 139  ---------------KGAPGVVGPPGPQGIPGDEGKRGPK------------------GD 165
                           +GA G  GP GP G  G++G RG K                  G+
Sbjct: 1040 PGPPGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQGRPGQPGQQGTAGE 1099

Query: 166  MGYPGP---------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G+ GP               +G+PG+ G +GP+G +G PG +G  G  G  GEPGL   
Sbjct: 1100 RGHSGPRGFPGIPGPSGPPGTKGLPGEPGPQGPQGLIGPPGEMGPKGPPGAVGEPGL--- 1156

Query: 211  PGRNGMD------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  GM       G PG+ GL G+ G PG  G +G  G  G +G+RG  G +G
Sbjct: 1157 PGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGSAGPDGLKGDRGDPGPDG 1209



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 63/127 (49%), Gaps = 13/127 (10%)

Query: 81   HNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RG 137
              NP V     ++ P    +G      +  PPG +G  G  G  G +GE G KG+    G
Sbjct: 1470 RGNPGVAGLPGAQGP-PGFKGESGLPGQLGPPGKRGTEGGTGLPGTQGEPGSKGQPGDSG 1528

Query: 138  EKGAPGVVGPPGPQGIPGD------EGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMG 188
            E G PG+ G  GP+G PGD      +G RGP G MG     GP GI G  G+ GPKGD G
Sbjct: 1529 EMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPLGILGPSGRPGPKGDKG 1588

Query: 189  YPGRIGL 195
              G +GL
Sbjct: 1589 SQGDLGL 1595



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 92/240 (38%), Gaps = 85/240 (35%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVG---------- 146
            QG      E   PGL+G  G  G  G KG+    G  GERGEKG  G+ G          
Sbjct: 1175 QGLIGQRGE---PGLEGDSGSAGPDGLKGDRGDPGPDGERGEKGQEGLKGEDGPPGPPGI 1231

Query: 147  --PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD---------------EGKRGPKGDMGY 189
                GP+G PG +G++G  G  G  G QG  G+               +G RG  G  G 
Sbjct: 1232 TGIRGPEGKPGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGA 1291

Query: 190  PGRIGLDGRDGLP----------------------------------------------- 202
            PGR+G  G  GL                                                
Sbjct: 1292 PGRMGAQGEPGLAGYEGHKGVIGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDQG 1351

Query: 203  --GEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GEPG  G PG+ G+ G+   PG+ GLPG  G  G  G  G KG  GP+G +GK+G  G
Sbjct: 1352 DRGEPGDPGYPGQEGVQGLRGNPGQQGLPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPG 1411



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 42/85 (49%), Gaps = 12/85 (14%)

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTN 238
           G KGDMG PG         L G PG  G  G  G  G    PG+ G PG +G PG  G  
Sbjct: 702 GAKGDMGLPG---------LSGNPGPLGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYP 752

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPA 263
           G +G+ GP G+ G  G  G+PG P 
Sbjct: 753 GRQGLPGPVGDPGPKGSRGLPGVPG 777



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 48/155 (30%)

Query: 139  KGAPGVVGPPGPQGIPGDEGKRGPK------------------GDMGYPGP--------- 171
            +GA G  GP GP G  G++G RG K                  G+ G+ GP         
Sbjct: 1055 RGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQGRPGQPGQQGTAGERGHSGPRGFPGIPGP 1114

Query: 172  ------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                  +G+PG+ G +GP+G +G PG +G  G  G  GEPGL   PG  GM G  G  G 
Sbjct: 1115 SGPPGTKGLPGEPGPQGPQGLIGPPGEMGPKGPPGAVGEPGL---PGEAGMKGDLGPLGT 1171

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG            E+G+ G RG  G  G +G  G
Sbjct: 1172 PG------------EQGLIGQRGEPGLEGDSGSAG 1194



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 60/131 (45%), Gaps = 24/131 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVK------------GERGEKGAPGVVGPPGPQGIPGDEGK 159
            PG +G  G  G +G KG +G              G  G+ G  G+ G PG +G+PG  G 
Sbjct: 878  PGARGKPGPLGRVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPRGH 937

Query: 160  RGPKGDM------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             GP+GD             G PG +G PG  G  G KG+ G PGR G  G  GL G  GL
Sbjct: 938  LGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGPDGLKGEPGSPGRPGPVGEQGLLGFIGL 997

Query: 208  DGIPGRNGMDG 218
             G PG  G  G
Sbjct: 998  VGEPGIMGEKG 1008



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 83/225 (36%), Gaps = 75/225 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PG  GP G KGE G+ G  G  GE+G  G  G+VG PG   I G++G RG          
Sbjct: 965  PGRPGPDGLKGEPGSPGRPGPVGEQGLLGFIGLVGEPG---IMGEKGDRGMVGPPGVPGP 1021

Query: 163  KGDMGYPGP------------------------QGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            KG MG+PG                         +G  G  G RGP G  G  G  GL G 
Sbjct: 1022 KGSMGHPGMPGGVGTPGEPGPPGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGP 1081

Query: 199  ---------------------------------------DGLPGEPGLDGIPGRNGMDGI 219
                                                    GLPGEPG  G  G  G  G 
Sbjct: 1082 PGPQGRPGQPGQQGTAGERGHSGPRGFPGIPGPSGPPGTKGLPGEPGPQGPQGLIGPPGE 1141

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G PG  G PG  G  G KG  GP G  G+ G+ G  G P +
Sbjct: 1142 MGPKGPPGAVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGL 1186


>gi|354467154|ref|XP_003496036.1| PREDICTED: collagen alpha-1(XIX) chain [Cricetulus griseus]
          Length = 1134

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 92/193 (47%), Gaps = 41/193 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G +G KG+ G  GE   KGE+G++G PG++GP G +G PGD G  G  G  G  G 
Sbjct: 462 PGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGLLGPQGTKGEPGDVGPPGLTGSPGLKGQ 521

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE--------------------------- 204
           QG  G  G RGP GD+G PG  G+ G+ G+ GE                           
Sbjct: 522 QGPAGAMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGRLGPPGLPGPKGDAGPPGKNL 581

Query: 205 ---PGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGMTGPRGNR 250
              PGLDG PG  G  G  G+ GLPG             GIPG  G+ G  G  G +G R
Sbjct: 582 TGKPGLDGNPGAPGPRGPKGERGLPGIHGSPGDTGPPGVGIPGRTGSQGPAGEPGIQGPR 641

Query: 251 GKSGINGVPGTPA 263
           G  G+ G PGTP 
Sbjct: 642 GLPGLPGTPGTPG 654



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 80/168 (47%), Gaps = 22/168 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  QG      +  PPGL G  G KG+ G  G MG +G  G+ G PG  G PG QGI G
Sbjct: 494 LLGPQGTKGEPGDVGPPGLTGSPGLKGQQGPAGAMGPRGPPGDVGLPGEHGIPGKQGIKG 553

Query: 156 DEGK----------------RGPKGD--MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           ++G                  GP G    G PG  G PG  G RGPKG+ G PG  G  G
Sbjct: 554 EKGDPGGRLGPPGLPGPKGDAGPPGKNLTGKPGLDGNPGAPGPRGPKGERGLPGIHGSPG 613

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G PG     GIPGR G  G  G+ G+ G  G+PG  GT G  G  G
Sbjct: 614 DTGPPGV----GIPGRTGSQGPAGEPGIQGPRGLPGLPGTPGTPGNDG 657



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 96/242 (39%), Gaps = 67/242 (27%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG---EIGAKGEMGV-------------------- 132
           L  + G      E    G++G  G+KG   E GAKG++G+                    
Sbjct: 313 LHGIPGLLGQKGEQGLEGIKGETGEKGQAEEPGAKGDIGLASLNAQDGLKGDLGPQGPPG 372

Query: 133 ----KGERGEKGAP---GVVGPPGPQGIPGDEGKRGPKGDM------------------- 166
               KG+ G  G P   G +G  GPQG PG EG+RG +G                     
Sbjct: 373 PKGEKGDTGPPGPPASTGSIGIQGPQGPPGKEGQRGRRGKTGPPGNPGPPGPPGPPGLQG 432

Query: 167 -----GY----PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------GLD 208
                GY     G  G  G +G++G  G  G+PG +G  G+ G PGEP         G  
Sbjct: 433 LQTFGGYFNKGTGEHGASGPKGEKGDSGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEP 492

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+ G  G  G PG  G PG  G PG  G  G  G  GPRG  G  G+ G  G P     K
Sbjct: 493 GLLGPQGTKGEPGDVGPPGLTGSPGLKGQQGPAGAMGPRGPPGDVGLPGEHGIPGKQGIK 552

Query: 269 RE 270
            E
Sbjct: 553 GE 554



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 68/145 (46%), Gaps = 24/145 (16%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPG---------------DEGKRGPKGDMGYPGPQ 172
           G MG+ G  G  G  G  GP GP GI G               + G+RGP GD G+PGP+
Sbjct: 855 GAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPGPPGVPGEPGERGPIGDTGFPGPE 914

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                    GP G  G  G+ GL G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 915 ---------GPSGKPGINGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGERGKP 965

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G  GP G++G  G  G
Sbjct: 966 GLMGMKGAIGPVGPPGSKGSIGSPG 990



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 60/131 (45%), Gaps = 36/131 (27%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
           PG  G+PG EG  G KGD G  GP GI G               + G+RGP GD G+PG 
Sbjct: 854 PGAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPGPPGVPGEPGERGPIGDTGFPGP 913

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGN 249
            G  G+ G                  I GKDGLPG  GI   PG  G  GE+G  G  G+
Sbjct: 914 EGPSGKPG------------------INGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGD 955

Query: 250 RGKSGINGVPG 260
           RG  G  G PG
Sbjct: 956 RGPQGERGKPG 966


>gi|334311872|ref|XP_003339678.1| PREDICTED: collagen alpha-1(XXVII) chain-like [Monodelphis domestica]
          Length = 1857

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 82/143 (57%), Gaps = 9/143 (6%)

Query: 134  GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP---KGDMGYP 190
            G+RGE G PG    PG +G+ G  GK G +G  G+PGP+G PG +G +G    KG  G  
Sbjct: 1391 GDRGEPGDPGY---PGQEGLEGSRGKAGQQGLPGHPGPRGRPGPKGSKGEEGQKGKQGKR 1447

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPR 247
            G  G  G  GL G PG  G+ GR G +G+PG+DG+PGKDG  G  G    +GE G  GP 
Sbjct: 1448 GEAGSRGMQGLVGMPGPRGVVGRQGQEGLPGQDGVPGKDGRAGEQGEQGDDGEVGPFGPA 1507

Query: 248  GNRGKSGINGVPGTPAICAYKRE 270
            G RG  G+ G+PG      +K E
Sbjct: 1508 GRRGNPGVAGLPGAQGPPGFKGE 1530



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 90/159 (56%), Gaps = 12/159 (7%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KGE G KG+ G +GE G +G  G+VG PGP+G+ G +G+ G  G  G PG
Sbjct: 1425 PRGRPGPKGSKGEEGQKGKQGKRGEAGSRGMQGLVGMPGPRGVVGRQGQEGLPGQDGVPG 1484

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK-------- 222
              G  G++G++G  G++G  G  G  G  G+ G PG  G PG  G +G+PG+        
Sbjct: 1485 KDGRAGEQGEQGDDGEVGPFGPAGRRGNPGVAGLPGAQGPPGFKGENGLPGQLGPIGKRG 1544

Query: 223  ----DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                 GLPG  G PG+ G  G++G+ GP G  G SGI G
Sbjct: 1545 TEGGTGLPGSQGEPGSKGQPGKEGVIGPLGILGPSGIPG 1583



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 94/173 (54%), Gaps = 12/173 (6%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            +G         P GL GP+G+   KG  GA GE G+ GE G KG  G +G PG QG+ G 
Sbjct: 1161 KGIPGEPGPQGPQGLIGPLGEIGLKGPPGALGEPGLPGEAGMKGDFGPLGIPGEQGLIGQ 1220

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G+ G +GD G  GP G+ GD+G+ GP G+ G  G+ GL G++G PG PG+ G+ G  G 
Sbjct: 1221 RGETGLEGDSGPAGPDGLKGDKGEPGPDGERGEKGKEGLKGKEGPPGYPGVTGVRGPEGK 1280

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMT---------GPRGNRGKSGINGVPG 260
             G  G+ G  G  G  G  G  GE G++         GP+G+RG  G  G PG
Sbjct: 1281 PGKQGEKGRTGPKGAKGYQGHLGEMGVSGEPGPAGNQGPKGSRGTLGPTGAPG 1333



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 87/168 (51%), Gaps = 12/168 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGP---KGDM 166
            GL+GP G  GE G  GE G+KG+ G  G PG   ++G  G  G+ GD G  GP   KGD 
Sbjct: 1183 GLKGPPGALGEPGLPGEAGMKGDFGPLGIPGEQGLIGQRGETGLEGDSGPAGPDGLKGDK 1242

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP------ 220
            G PGP G  G++GK G KG  G PG  G+ G  G  G+PG  G  GR G  G        
Sbjct: 1243 GEPGPDGERGEKGKEGLKGKEGPPGYPGVTGVRGPEGKPGKQGEKGRTGPKGAKGYQGHL 1302

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G+ G+ G+ G  G  G  G +G  GP G  G+ G  G PG P    +K
Sbjct: 1303 GEMGVSGEPGPAGNQGPKGSRGTLGPTGAPGRMGAQGEPGLPGYDGHK 1350



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 91/181 (50%), Gaps = 33/181 (18%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP--------- 171
            +G  G +G  G  G  GE+G+ GV GPPG QG  G +G++G +G+ G  GP         
Sbjct: 1095 RGAKGRRGPRGPDGPAGEQGSQGVKGPPGTQGKQGLDGQQGQEGERGEMGPRGFPGIPGP 1154

Query: 172  ------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------------GIPGR 213
                  +GIPG+ G +GP+G +G  G IGL G  G  GEPGL             GIPG 
Sbjct: 1155 SGPPGAKGIPGEPGPQGPQGLIGPLGEIGLKGPPGALGEPGLPGEAGMKGDFGPLGIPGE 1214

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV------PGTPAICAY 267
             G+ G  G+ GL G  G  G +G  G+KG  GP G RG+ G  G+      PG P +   
Sbjct: 1215 QGLIGQRGETGLEGDSGPAGPDGLKGDKGEPGPDGERGEKGKEGLKGKEGPPGYPGVTGV 1274

Query: 268  K 268
            +
Sbjct: 1275 R 1275



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 83/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL G  GQ G  G +G+MG     G+ GE+G PG+ G PG  G PG  G  G  GDMG 
Sbjct: 804 PGLDGERGQPGVHGKRGKMGRPGFPGDFGERGPPGLDGNPGELGAPGPPGVHGLIGDMGA 863

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            GP G PG +G +G  G++G  G  G  G  GLPG PG  G  G  G  G+ G  G  GK
Sbjct: 864 IGPIGYPGPKGMKGLMGNIGEHGLKGDKGDQGLPGVPGDIGFQGDKGSQGMSGSPGARGK 923

Query: 229 DGIPGTNGTN------------------GEKGMTGPRGNRGKSGINGVPG 260
            G PG +G                    G  G  GP G +GK G  G+PG
Sbjct: 924 PGPPGKSGDKGPVGFPGPPGPEGFPGDIGPPGQNGPEGAKGKPGARGLPG 973



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 97/243 (39%), Gaps = 82/243 (33%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA------------PGVVGP 147
            QG      E    G  GP G  G  G KGE G  GERGEKG             PGV G 
Sbjct: 1215 QGLIGQRGETGLEGDSGPAGPDGLKGDKGEPGPDGERGEKGKEGLKGKEGPPGYPGVTGV 1274

Query: 148  PGPQGIPGDEGKR---GPKGDMGY------------PGPQGIPGDEGKRGPKGDMGYPGR 192
             GP+G PG +G++   GPKG  GY            PGP G  G +G RG  G  G PGR
Sbjct: 1275 RGPEGKPGKQGEKGRTGPKGAKGYQGHLGEMGVSGEPGPAGNQGPKGSRGTLGPTGAPGR 1334

Query: 193  IGLDGRDGLP-------------------------------------------------G 203
            +G  G  GLP                                                 G
Sbjct: 1335 MGAQGEPGLPGYDGHKGLQGPLGPPGPKGEKGEQGDDGKTEGPPGPPGDRGPVGDHGDRG 1394

Query: 204  EPGLDGIPGRNGMDGIPGKDGL------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            EPG  G PG+ G++G  GK G       PG  G PG  G+ GE+G  G +G RG++G  G
Sbjct: 1395 EPGDPGYPGQEGLEGSRGKAGQQGLPGHPGPRGRPGPKGSKGEEGQKGKQGKRGEAGSRG 1454

Query: 258  VPG 260
            + G
Sbjct: 1455 MQG 1457



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 81/154 (52%), Gaps = 15/154 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GPIG+ G  G++G +G+ G         ERG+ G  G  G  G  G PGD G+RGP 
Sbjct: 778 GLPGPIGEPGPKGSRGYIGLPGLFGLPGLDGERGQPGVHGKRGKMGRPGFPGDFGERGPP 837

Query: 164 G------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G      ++G PGP G+ G  G  G  G +GYPG  G+ G  G  GE GL G  G  G+ 
Sbjct: 838 GLDGNPGELGAPGPPGVHGLIGDMGAIGPIGYPGPKGMKGLMGNIGEHGLKGDKGDQGLP 897

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           G+PG  G  G  G  G +G+ G +G  GP G  G
Sbjct: 898 GVPGDIGFQGDKGSQGMSGSPGARGKPGPPGKSG 931



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 94/185 (50%), Gaps = 27/185 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL G  G  G IG KG  G          +G+ G +G+PG  G PG QG+PG  G+ GPK
Sbjct: 730 GLSGLTGTLGPIGRKGLKGYPGPPGHPGDQGQPGPEGSPGAKGYPGRQGLPGPIGEPGPK 789

Query: 164 GDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRN 214
           G  GY   PG  G+PG +G+RG  G  G  G++   GR G PG+      PGLDG PG  
Sbjct: 790 GSRGYIGLPGLFGLPGLDGERGQPGVHGKRGKM---GRPGFPGDFGERGPPGLDGNPGEL 846

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI------NGVPGTPAICAYK 268
           G  G PG  GL G  G  G  G  G KGM G  GN G+ G+       G+PG P    ++
Sbjct: 847 GAPGPPGVHGLIGDMGAIGPIGYPGPKGMKGLMGNIGEHGLKGDKGDQGLPGVPGDIGFQ 906

Query: 269 RESCS 273
            +  S
Sbjct: 907 GDKGS 911



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 106/227 (46%), Gaps = 54/227 (23%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEG 158
            P G QG  G KG  G +G+ G+ G++G++G  G +GP            PG +GIPG+ G
Sbjct: 1109 PAGEQGSQGVKGPPGTQGKQGLDGQQGQEGERGEMGPRGFPGIPGPSGPPGAKGIPGEPG 1168

Query: 159  KRGPK---------------GDMGYP------------GPQGIPGDEGKRGPKGDMGYPG 191
             +GP+               G +G P            GP GIPG++G  G +G+ G  G
Sbjct: 1169 PQGPQGLIGPLGEIGLKGPPGALGEPGLPGEAGMKGDFGPLGIPGEQGLIGQRGETGLEG 1228

Query: 192  RIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN------GTNGEKG 242
              G  G DGL    GEPG DG  G  G +G+ GK+G PG  G+ G        G  GEKG
Sbjct: 1229 DSGPAGPDGLKGDKGEPGPDGERGEKGKEGLKGKEGPPGYPGVTGVRGPEGKPGKQGEKG 1288

Query: 243  MTGPRGNR------GKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
             TGP+G +      G+ G++G PG       K    +L P     ++
Sbjct: 1289 RTGPKGAKGYQGHLGEMGVSGEPGPAGNQGPKGSRGTLGPTGAPGRM 1335



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 77/157 (49%), Gaps = 18/157 (11%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             MQG           G QG  G  G+ G  G+ G  GE+GE+G  G VGP GP       
Sbjct: 1454 GMQGLVGMPGPRGVVGRQGQEGLPGQDGVPGKDGRAGEQGEQGDDGEVGPFGP------A 1507

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G+RG  G  G PG QG PG +G+ G  G +G  G+ G +G  GLPG              
Sbjct: 1508 GRRGNPGVAGLPGAQGPPGFKGENGLPGQLGPIGKRGTEGGTGLPGS------------Q 1555

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G PG  G PGK+G+ G  G  G  G+ GP+GN+G  G
Sbjct: 1556 GEPGSKGQPGKEGVIGPLGILGPSGIPGPKGNKGSRG 1592



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 90/209 (43%), Gaps = 45/209 (21%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G         P G  GP G KG +G  GE G+KG++G++G PGV G  G QG  G +
Sbjct: 853  GVHGLIGDMGAIGPIGYPGPKGMKGLMGNIGEHGLKGDKGDQGLPGVPGDIGFQGDKGSQ 912

Query: 158  GKRGPKGDMGYPGPQGIPGDE---------------------GKRGPKGDMGYPGRIGLD 196
            G  G  G  G PGP G  GD+                     G+ GP+G  G PG  GL 
Sbjct: 913  GMSGSPGARGKPGPPGKSGDKGPVGFPGPPGPEGFPGDIGPPGQNGPEGAKGKPGARGLP 972

Query: 197  GRDG------------------LPGEPGLDGIPGRNGMDGI---PGKDGLPGK---DGIP 232
            G  G                  L G+ G  G PGR G DG    PG  G PG+    G+ 
Sbjct: 973  GPRGQLGQEGDEGPMGPPGSPGLEGQLGRKGFPGRPGPDGSKGEPGNAGRPGRVGEQGLM 1032

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  GE G+ G +G RG  G  G PG 
Sbjct: 1033 GFIGLVGEPGIVGEKGGRGAMGPPGAPGA 1061



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 83/163 (50%), Gaps = 21/163 (12%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------DEGKRGPKGD- 165
           GQKG+ G        GE+G+ G  G+ G  GP G  G            D+G+ GP+G  
Sbjct: 709 GQKGDPGLSPGKAYDGEKGDIGLSGLTGTLGPIGRKGLKGYPGPPGHPGDQGQPGPEGSP 768

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
              GYPG QG+PG  G+ GPKG  GY   PG  GL G DG  G+PG+ G  G+ G  G P
Sbjct: 769 GAKGYPGRQGLPGPIGEPGPKGSRGYIGLPGLFGLPGLDGERGQPGVHGKRGKMGRPGFP 828

Query: 221 ---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G+ G PG DG PG  G  G  G+ G  G+ G  G  G PG
Sbjct: 829 GDFGERGPPGLDGNPGELGAPGPPGVHGLIGDMGAIGPIGYPG 871



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 81/166 (48%), Gaps = 33/166 (19%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------ 154
           GF     E  PPGL G     GE+GA G  GV G  G+ GA G +G PGP+G+       
Sbjct: 826 GFPGDFGERGPPGLDG---NPGELGAPGPPGVHGLIGDMGAIGPIGYPGPKGMKGLMGNI 882

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------ 208
           G+ G +G KGD G P   G+PGD G +G KG  G  G  G  G+ G PG+ G        
Sbjct: 883 GEHGLKGDKGDQGLP---GVPGDIGFQGDKGSQGMSGSPGARGKPGPPGKSGDKGPVGFP 939

Query: 209 ------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                       G PG+NG +G  GK   PG  G+PG  G  G++G
Sbjct: 940 GPPGPEGFPGDIGPPGQNGPEGAKGK---PGARGLPGPRGQLGQEG 982



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 81/175 (46%), Gaps = 36/175 (20%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPG 176
            +IG  G+ G +G +G+ GA G+ GP G  G  GDEG  GP      +G +G  G  G PG
Sbjct: 950  DIGPPGQNGPEGAKGKPGARGLPGPRGQLGQEGDEGPMGPPGSPGLEGQLGRKGFPGRPG 1009

Query: 177  DEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             +G +G  G+ G PGR+   GL G  GL GEPG+ G  G  G  G PG  G  G  G PG
Sbjct: 1010 PDGSKGEPGNAGRPGRVGEQGLMGFIGLVGEPGIVGEKGGRGAMGPPGAPGAKGSMGHPG 1069

Query: 234  T---------------------------NGTNGEKGMTGPRGNRGKSGINGVPGT 261
            T                            G  G +G  GP G +G  G+ G PGT
Sbjct: 1070 TAGGVGDPGDPGPPGPPGTRGPLGLRGAKGRRGPRGPDGPAGEQGSQGVKGPPGT 1124



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 86/199 (43%), Gaps = 42/199 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG------APGVVGPPGPQGIPGDEGKRGPKGD 165
            PG  GP G KGE G  G  G  GE+G  G       PG+VG  G +G  G  G  G KG 
Sbjct: 1005 PGRPGPDGSKGEPGNAGRPGRVGEQGLMGFIGLVGEPGIVGEKGGRGAMGPPGAPGAKGS 1064

Query: 166  MGYPG---------------------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            MG+PG                     P G+ G +G+RGP+G  G  G  G  G  G PG 
Sbjct: 1065 MGHPGTAGGVGDPGDPGPPGPPGTRGPLGLRGAKGRRGPRGPDGPAGEQGSQGVKGPPGT 1124

Query: 205  PGLDGIPGRNGMDGIPGKDG------------LPGKDGIPGTNGTNGEKGMTGPRGN--- 249
             G  G+ G+ G +G  G+ G             PG  GIPG  G  G +G+ GP G    
Sbjct: 1125 QGKQGLDGQQGQEGERGEMGPRGFPGIPGPSGPPGAKGIPGEPGPQGPQGLIGPLGEIGL 1184

Query: 250  RGKSGINGVPGTPAICAYK 268
            +G  G  G PG P     K
Sbjct: 1185 KGPPGALGEPGLPGEAGMK 1203



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPG--- 149
            L   QG      E   PG  GPIG++G  G  G  G +GE G KG PG   V+GP G   
Sbjct: 1518 LPGAQGPPGFKGENGLPGQLGPIGKRGTEGGTGLPGSQGEPGSKGQPGKEGVIGPLGILG 1577

Query: 150  PQGIPGDEGKRGPKGDMGY 168
            P GIPG +G +G +GD+G 
Sbjct: 1578 PSGIPGPKGNKGSRGDLGL 1596



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 12/102 (11%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER---------GEKGAPGVVGPPGP 150
            QG       + P G +G  G  G  GA+G  G KGE          G++G  G  G PG 
Sbjct: 1495 QGDDGEVGPFGPAGRRGNPGVAGLPGAQGPPGFKGENGLPGQLGPIGKRGTEGGTGLPGS 1554

Query: 151  QGIPGDE---GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            QG PG +   GK G  G +G  GP GIPG +G +G +GD+G 
Sbjct: 1555 QGEPGSKGQPGKEGVIGPLGILGPSGIPGPKGNKGSRGDLGL 1596


>gi|328721781|ref|XP_003247404.1| PREDICTED: collagen alpha-1(V) chain-like, partial [Acyrthosiphon
           pisum]
          Length = 915

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/152 (44%), Positives = 89/152 (58%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G++GPIG+KG+ G +G  G KG++G KG PG+ GPPG  GI G EG +G +G  G  G  
Sbjct: 604 GVRGPIGEKGDKGDRGSDGEKGDQGLKGEPGLAGPPGLVGIEGPEGPKGSEGPHGESGTI 663

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+ G++GK GP G  GYPG  G  G  G  G+ G+ G  G  G  G+PG+ G  G  G  
Sbjct: 664 GLSGEKGKPGPAGLPGYPGAPGEKGDKGAYGKDGISGEKGERGNTGLPGERGETGPRGFR 723

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G  G +G+ GP+G+ G+ G  G  G   I
Sbjct: 724 GARGREGSEGIPGPKGDTGQPGPTGALGERGI 755



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 99/205 (48%), Gaps = 21/205 (10%)

Query: 100 QGFCNSTKEYCPPGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           QG         PPGL   +GP G KG  G  GE G  G  GEKG PG  G PG  G PG+
Sbjct: 627 QGLKGEPGLAGPPGLVGIEGPEGPKGSEGPHGESGTIGLSGEKGKPGPAGLPGYPGAPGE 686

Query: 157 EGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           +G +G        G+ G  G  G+PG+ G+ GP+G  G  GR   +G +G+PG  G  G 
Sbjct: 687 KGDKGAYGKDGISGEKGERGNTGLPGERGETGPRGFRGARGR---EGSEGIPGPKGDTGQ 743

Query: 211 PGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGM------TGPRGNRGKSGINGVPGT 261
           PG  G     GIPG DGL G  G PG  G +G+ G+       GP G+ G  G+ G+PG 
Sbjct: 744 PGPTGALGERGIPGADGLRGFVGPPGAPGISGKDGLPGFPRERGPPGDTGPIGVTGIPGV 803

Query: 262 PAICAYKRESCSLLPNSETSQLLIP 286
                   E  S+     + Q  +P
Sbjct: 804 VGPPGQSGEIGSVGEPGPSGQPGLP 828



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 84/164 (51%), Gaps = 27/164 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G+KG+ GA G+ G+ GE+GE+G           G+PG+ G+ GP+   G+ G 
Sbjct: 678 PGYPGAPGEKGDKGAYGKDGISGEKGERGN---------TGLPGERGETGPR---GFRGA 725

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP----- 226
           +G  G EG  GPKGD G PG  G  G  G+PG  GL G  G  G  GI GKDGLP     
Sbjct: 726 RGREGSEGIPGPKGDTGQPGPTGALGERGIPGADGLRGFVGPPGAPGISGKDGLPGFPRE 785

Query: 227 ----------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                     G  GIPG  G  G+ G  G  G  G SG  G+PG
Sbjct: 786 RGPPGDTGPIGVTGIPGVVGPPGQSGEIGSVGEPGPSGQPGLPG 829



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 88/189 (46%), Gaps = 27/189 (14%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG- 158
           +GF  +       G+ GP G  G+ G  G +G +G  G  G  G VGPPG  GI G +G 
Sbjct: 720 RGFRGARGREGSEGIPGPKGDTGQPGPTGALGERGIPGADGLRGFVGPPGAPGISGKDGL 779

Query: 159 -----KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                +RGP GD G  G  GIPG  G  G  G++G  G  G  G+ GLPGE G  G  G+
Sbjct: 780 PGFPRERGPPGDTGPIGVTGIPGVVGPPGQSGEIGSVGEPGPSGQPGLPGEAGRPGDAGK 839

Query: 214 N---------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMT------GPRGNRGK 252
                           G  G+PG  GL G  G PG  G+ G+KG        GP+G  G+
Sbjct: 840 EGLPGPVGPPGKLGEPGFPGVPGAAGLKGDTGPPGPLGSTGDKGQQGESGKEGPQGAEGR 899

Query: 253 SGINGVPGT 261
            G  G PG 
Sbjct: 900 KGPTGTPGA 908



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 89/215 (41%), Gaps = 54/215 (25%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGD 156
           +G      E  P G++G  G  G  G +G+ G  GERG  G PGV G PG   P G+PG+
Sbjct: 387 KGESGEQGEVGPRGVRGMPGPPGRDGHRGKPGRDGERGVTGPPGVKGEPGVPGPMGLPGE 446

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL--------------- 201
           +G RG  G +G  GP+G  G +G+ GP+G  G PG +G  G  GL               
Sbjct: 447 KGDRGLTGQVGVTGPRGSDGPQGEEGPQGLAGLPGEMGPRGFAGLRGFPGSPGPPGIPGS 506

Query: 202 ---------------PGEPGLDGIPGRNGMDGIPG---------------------KDGL 225
                          PG PG  G  G  G  G PG                      DGL
Sbjct: 507 EGPTGSKGNTGNTGIPGPPGQIGAAGPVGSTGSPGALGPPGDQGPPGKPGLPGLPGADGL 566

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G  G  G+ G+ G  G  G  G SG  GV G
Sbjct: 567 PGHPGNTGAVGSKGDTGSIGSPGPIGFSGTRGVKG 601



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 76/178 (42%), Gaps = 45/178 (25%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G  G  G KG  G +G PGP G     G RG KGD+G  GP G  GD+G RG  
Sbjct: 565 GLPGHPGNTGAVGSKGDTGSIGSPGPIGF---SGTRGVKGDIGVRGPIGEKGDKGDRGSD 621

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGI---------------------------PGRNGMD 217
           G+ G     GL G  GL G PGL GI                           PG  G+ 
Sbjct: 622 GEKG---DQGLKGEPGLAGPPGLVGIEGPEGPKGSEGPHGESGTIGLSGEKGKPGPAGLP 678

Query: 218 GIP------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G P            GKDG+ G+ G  G  G  GE+G TGPRG RG  G  G  G P 
Sbjct: 679 GYPGAPGEKGDKGAYGKDGISGEKGERGNTGLPGERGETGPRGFRGARGREGSEGIPG 736



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 78/235 (33%), Positives = 93/235 (39%), Gaps = 67/235 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
           G+ GP G KGE G  G MG+ GE+G++G  G VG  GP+G  G +G+ GP+G  G PG  
Sbjct: 424 GVTGPPGVKGEPGVPGPMGLPGEKGDRGLTGQVGVTGPRGSDGPQGEEGPQGLAGLPGEM 483

Query: 171 -PQGI------------------------------------PGDEGKRGPKGDMGYPGRI 193
            P+G                                     PG  G  GP G  G PG +
Sbjct: 484 GPRGFAGLRGFPGSPGPPGIPGSEGPTGSKGNTGNTGIPGPPGQIGAAGPVGSTGSPGAL 543

Query: 194 ---------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                          GL G DGLPG PG  G  G  G     G  G PG  G  GT G  
Sbjct: 544 GPPGDQGPPGKPGLPGLPGADGLPGHPGNTGAVGSKGDT---GSIGSPGPIGFSGTRGVK 600

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
           G+ G+ GP G +G  G  G  G       K E            L  PP +VG E
Sbjct: 601 GDIGVRGPIGEKGDKGDRGSDGEKGDQGLKGEPG----------LAGPPGLVGIE 645



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 97/208 (46%), Gaps = 57/208 (27%)

Query: 99  MQGFCNST-KEY-CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-----PQ 151
           +Q  C+S+ + Y  PPG+QGP G KG+          G  G  G  G+ GPPG     P 
Sbjct: 285 LQSPCSSSVRGYPGPPGVQGPQGPKGD---------SGRDGIDGYAGIQGPPGHVFLIP- 334

Query: 152 GIPGDEGKRGP--KGDM-------------GYPGPQGI------------------PGDE 178
            +  ++G++GP  + +M             G  GP G+                   G++
Sbjct: 335 -LNQNQGEKGPDSQAEMFRQMLAQHMLSMRGIDGPMGMTGVVGPEGPPGPEGPKGESGEQ 393

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKD---GIP 232
           G+ GP+G  G PG  G DG  G P   GE G+ G PG  G  G+PG  GLPG+    G+ 
Sbjct: 394 GEVGPRGVRGMPGPPGRDGHRGKPGRDGERGVTGPPGVKGEPGVPGPMGLPGEKGDRGLT 453

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G +G  GP+G  G  G+ G+PG
Sbjct: 454 GQVGVTGPRGSDGPQGEEGPQGLAGLPG 481



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 82/194 (42%), Gaps = 72/194 (37%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------DEGKRGP--- 183
           RG  G PGV GP GP+   GD G+    G  GY G QG PG         ++G++GP   
Sbjct: 294 RGYPGPPGVQGPQGPK---GDSGR---DGIDGYAGIQGPPGHVFLIPLNQNQGEKGPDSQ 347

Query: 184 ---------------------------------------KGDMGYPGRIGLDGRDGLPGE 204
                                                  KG+ G  G +G  G  G+PG 
Sbjct: 348 AEMFRQMLAQHMLSMRGIDGPMGMTGVVGPEGPPGPEGPKGESGEQGEVGPRGVRGMPGP 407

Query: 205 PGLD---GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGN--- 249
           PG D   G PGR+G  G+ G  G+ G+ G+PG  G  GEK         G+TGPRG+   
Sbjct: 408 PGRDGHRGKPGRDGERGVTGPPGVKGEPGVPGPMGLPGEKGDRGLTGQVGVTGPRGSDGP 467

Query: 250 RGKSGINGVPGTPA 263
           +G+ G  G+ G P 
Sbjct: 468 QGEEGPQGLAGLPG 481



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 52/116 (44%), Gaps = 33/116 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------------I 153
           PG+ GP GQ GEIG+ GE    G  G+ G PG  G PG  G                   
Sbjct: 801 PGVVGPPGQSGEIGSVGE---PGPSGQPGLPGEAGRPGDAGKEGLPGPVGPPGKLGEPGF 857

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEG------KRGP------KGDMGYPGRIGLDG 197
           PG  G  G KGD G PGP G  GD+G      K GP      KG  G PG +GL G
Sbjct: 858 PGVPGAAGLKGDTGPPGPLGSTGDKGQQGESGKEGPQGAEGRKGPTGTPGAVGLKG 913



 Score = 40.0 bits (92), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 82/219 (37%), Gaps = 69/219 (31%)

Query: 112 PGLQGPIG---QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR-------- 160
           PG+ GP+G   +KG+ G  G++GV G RG  G  G  GP G  G+PG+ G R        
Sbjct: 435 PGVPGPMGLPGEKGDRGLTGQVGVTGPRGSDGPQGEEGPQGLAGLPGEMGPRGFAGLRGF 494

Query: 161 ----------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG------- 197
                           G KG+ G  G  G PG  G  GP G  G PG +G  G       
Sbjct: 495 PGSPGPPGIPGSEGPTGSKGNTGNTGIPGPPGQIGAAGPVGSTGSPGALGPPGDQGPPGK 554

Query: 198 --------RDGLPGEPGLDGI---PGRNGMDGIPGKDGLPG------------------- 227
                    DGLPG PG  G     G  G  G PG  G  G                   
Sbjct: 555 PGLPGLPGADGLPGHPGNTGAVGSKGDTGSIGSPGPIGFSGTRGVKGDIGVRGPIGEKGD 614

Query: 228 -----KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                 DG  G  G  GE G+ GP G  G  G  G  G+
Sbjct: 615 KGDRGSDGEKGDQGLKGEPGLAGPPGLVGIEGPEGPKGS 653


>gi|313230516|emb|CBY18732.1| unnamed protein product [Oikopleura dioica]
          Length = 1132

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/154 (50%), Positives = 91/154 (59%), Gaps = 6/154 (3%)

Query: 112 PGLQGPIGQK--GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           PG  GP G K  G  G+ GE G+ GE G +G  G +G PGPQG+ G+ GK GPKGD G  
Sbjct: 718 PGEDGPPGTKECGAKGSSGEPGLDGELGPQGPSGPMGLPGPQGLRGEIGKTGPKGDRGPE 777

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G+PGD G  G  GD G PG  G  G  G PG  GLDG  G +G  G  G  G PGK+
Sbjct: 778 GPHGVPGDPGMAGNPGDAGIPGDTGAKGDQGPPGARGLDGELGLSGEKGNRGIAGPPGKE 837

Query: 230 GIPGTNGTNGEK---GMTGPRGNRGKSGINGVPG 260
           GI G  G  GE+   G+ GP+G  GK G+ G+PG
Sbjct: 838 GIKGPQGNPGEQGRPGIPGPKGTAGKPGV-GIPG 870



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/149 (48%), Positives = 85/149 (57%), Gaps = 17/149 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPG------PQGIPGDEGKRG-- 161
           G+ G  G KG+ G  G  G+ GE    GEKG  G+ GPPG      PQG PG++G+ G  
Sbjct: 796 GIPGDTGAKGDQGPPGARGLDGELGLSGEKGNRGIAGPPGKEGIKGPQGNPGEQGRPGIP 855

Query: 162 -PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLP-GEPGLDGIPGRNGM 216
            PKG  G PG  GIPG+ G +G KG  G  G  G+ G     GLP G PGL G PG+NG 
Sbjct: 856 GPKGTAGKPG-VGIPGESGAKGAKGPQGPKGDTGMSGPPGPQGLPAGNPGLPGTPGKNGT 914

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G+PG  G PG DG+PG  G NG  G TG
Sbjct: 915 PGLPGNLGEPGADGLPGAPGANGLPGETG 943



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/181 (43%), Positives = 91/181 (50%), Gaps = 29/181 (16%)

Query: 103 CNSTKEYCPPGLQGPIGQK---GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           C +      PGL G +G +   G +G  G  G++GE G+ G  G  GP GP G+PGD G 
Sbjct: 729 CGAKGSSGEPGLDGELGPQGPSGPMGLPGPQGLRGEIGKTGPKGDRGPEGPHGVPGDPGM 788

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------PGLDGI 210
                  G PG  GIPGD G    KGD G PG  GLDG  GL GE         PG +GI
Sbjct: 789 ------AGNPGDAGIPGDTGA---KGDQGPPGARGLDGELGLSGEKGNRGIAGPPGKEGI 839

Query: 211 ------PGRNGMDGIPGKDGLPGKD--GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                 PG  G  GIPG  G  GK   GIPG +G  G KG  GP+G+ G SG  G  G P
Sbjct: 840 KGPQGNPGEQGRPGIPGPKGTAGKPGVGIPGESGAKGAKGPQGPKGDTGMSGPPGPQGLP 899

Query: 263 A 263
           A
Sbjct: 900 A 900



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 89/169 (52%), Gaps = 35/169 (20%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------------- 159
           G+ GE G KGE G +G+ G+ GA G  G PG  GIPG++G                    
Sbjct: 683 GRDGENGPKGERGHQGKSGKPGAAGTPGRPGKDGIPGEDGPPGTKECGAKGSSGEPGLDG 742

Query: 160 ----RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
               +GP G MG PGPQG+ G+ GK GPKGD G       +G  G+PG+PG+ G PG  G
Sbjct: 743 ELGPQGPSGPMGLPGPQGLRGEIGKTGPKGDRGP------EGPHGVPGDPGMAGNPGDAG 796

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              IPG  G  G  G PG  G +GE G++G +GNRG   I G PG   I
Sbjct: 797 ---IPGDTGAKGDQGPPGARGLDGELGLSGEKGNRG---IAGPPGKEGI 839



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 96/188 (51%), Gaps = 34/188 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGA-----------PGVVGPPGPQGIPGDEGKRG 161
           G  G IG +G  G  G++G  GE G+KGA           PG  G  G  GIPG++G RG
Sbjct: 603 GSPGEIGPRGATGRPGDVGPSGENGQKGASGQPGKAKIGYPGAKGNKGVDGIPGEQGPRG 662

Query: 162 PKGDMGYPG-----PQ-GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN- 214
            +G+ G  G     PQ G  G +G+ GPKG+ G+ G+ G  G  G PG PG DGIPG + 
Sbjct: 663 VQGEPGIKGEAVVGPQAGQDGRDGENGPKGERGHQGKSGKPGAAGTPGRPGKDGIPGEDG 722

Query: 215 ----------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                           G+DG  G  G  G  G+PG  G  GE G TGP+G+RG  G +GV
Sbjct: 723 PPGTKECGAKGSSGEPGLDGELGPQGPSGPMGLPGPQGLRGEIGKTGPKGDRGPEGPHGV 782

Query: 259 PGTPAICA 266
           PG P +  
Sbjct: 783 PGDPGMAG 790



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 92/169 (54%), Gaps = 29/169 (17%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG--IPGDEGKRGPKGDMGYPGPQGIPG 176
           G  G  G+ G  G  GERGE      +GPPG QG  IPG +G++G KG        G+PG
Sbjct: 441 GSPGRDGSDGPRGPPGERGE------IGPPGAQGESIPGQDGQKGEKGS------SGLPG 488

Query: 177 DEGKRGPKGD---------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           ++G+RG KG+         +G PG+ G  G+ GLPGE G + +PG  G+ G  G  G  G
Sbjct: 489 EQGRRGQKGESVVVDMKSIIGAPGQRGPSGQPGLPGENG-ESVPGPQGLKGDQGPQGQEG 547

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKS-----GINGVPGTPAICAYKRES 271
             G+PG NG +G KG TGP+G +G +     G+ G+PG P       ES
Sbjct: 548 SQGVPGRNGEHGPKGNTGPKGLKGATGESTRGLPGIPGKPGTSGVPGES 596



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 96/200 (48%), Gaps = 53/200 (26%)

Query: 108 EYCPPGLQGPIGQKGEI---------------GAKGEMGVKGERGEKGAPGVVGPPGPQG 152
           E  P G+QG  G KGE                G KGE G +G+ G+ GA G  G PG  G
Sbjct: 657 EQGPRGVQGEPGIKGEAVVGPQAGQDGRDGENGPKGERGHQGKSGKPGAAGTPGRPGKDG 716

Query: 153 IPGDE-----------------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           IPG++                       G +GP G MG PGPQG+ G+ GK GPKGD G 
Sbjct: 717 IPGEDGPPGTKECGAKGSSGEPGLDGELGPQGPSGPMGLPGPQGLRGEIGKTGPKGDRGP 776

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                 +G  G+PG+PG+ G PG     GIPG  G  G  G PG  G +GE G++G +GN
Sbjct: 777 ------EGPHGVPGDPGMAGNPGDA---GIPGDTGAKGDQGPPGARGLDGELGLSGEKGN 827

Query: 250 R------GKSGINGVPGTPA 263
           R      GK GI G  G P 
Sbjct: 828 RGIAGPPGKEGIKGPQGNPG 847



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 91/188 (48%), Gaps = 38/188 (20%)

Query: 108 EYCPPGLQGPI-----GQKGEIGAKGEMGVKGERGEK------------GAPGVVGPPGP 150
           E  PPG QG       GQKGE G+ G  G +G RG+K            GAPG  GP G 
Sbjct: 460 EIGPPGAQGESIPGQDGQKGEKGSSGLPGEQGRRGQKGESVVVDMKSIIGAPGQRGPSGQ 519

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---------IGLDGRDGL 201
            G+PG+ G+         PGPQG+ GD+G +G +G  G PGR          G  G  G 
Sbjct: 520 PGLPGENGES-------VPGPQGLKGDQGPQGQEGSQGVPGRNGEHGPKGNTGPKGLKGA 572

Query: 202 PGEP--GLDGIPGRNGMDGIPGKDGLPGKDGIPGT---NGTNGEKGMTGPRGNRGKSGIN 256
            GE   GL GIPG+ G  G+PG+ G PG  G PG     G  G  G  GP G  G+ G +
Sbjct: 573 TGESTRGLPGIPGKPGTSGVPGESGKPGITGSPGEIGPRGATGRPGDVGPSGENGQKGAS 632

Query: 257 GVPGTPAI 264
           G PG   I
Sbjct: 633 GQPGKAKI 640



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 80/158 (50%), Gaps = 37/158 (23%)

Query: 116 GPIGQKGEIGAKGEMG--------------VKGERGEKG--------------------A 141
           GP G+ G++G KG MG              VKG++GEKG                     
Sbjct: 187 GPSGEPGQLGEKGAMGEPGLPGERGRAGKSVKGQKGEKGMSALPAWLGPDQLMMKGMKGE 246

Query: 142 PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
           PG  G PG  G PG+ G +G KGD G   P G+PG++G+ GPKG+ G  G IG  G  G 
Sbjct: 247 PGDDGQPGLTGEPGECGTKGEKGDRG---PAGVPGEDGRPGPKGEKGSEGGIGAPGMPGS 303

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           PG PG+ G PG +G +G  G  GLPG  G  G NG +G
Sbjct: 304 PGSPGVSGRPGADGPNGEKGSAGLPGLSGEAGRNGKDG 341



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 96/221 (43%), Gaps = 49/221 (22%)

Query: 103 CNSTK-EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--------GPPGPQGI 153
           CN TK E  P G QG  G +G  GA G  G KGE      PG V        GP GP+G 
Sbjct: 120 CNGTKGETGPAGPQGVPGLRGATGAPGNFGAKGE------PGSVNVDLSKLTGPAGPRGS 173

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIP 211
           PG  G   P+G  G  GP G PG  G++G  G+ G PG  G  G+   G  GE G+  +P
Sbjct: 174 PGAPG---PQGYTGECGPSGEPGQLGEKGAMGEPGLPGERGRAGKSVKGQKGEKGMSALP 230

Query: 212 G--------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKG------------MTGPRGNRG 251
                      GM G PG DG PG  G PG  GT GEKG              GP+G +G
Sbjct: 231 AWLGPDQLMMKGMKGEPGDDGQPGLTGEPGECGTKGEKGDRGPAGVPGEDGRPGPKGEKG 290

Query: 252 KSG------INGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
             G      + G PG+P +           PN E     +P
Sbjct: 291 SEGGIGAPGMPGSPGSPGVSGRPGADG---PNGEKGSAGLP 328



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/102 (49%), Positives = 58/102 (56%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KGE G  G+ G+ GE GE G  G  G  GP G+PG++G+ GPKG+ G  G  G PG  
Sbjct: 242 GMKGEPGDDGQPGLTGEPGECGTKGEKGDRGPAGVPGEDGRPGPKGEKGSEGGIGAPGMP 301

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G  G  G PG  G +G  G  G PGL G  GRNG DG P
Sbjct: 302 GSPGSPGVSGRPGADGPNGEKGSAGLPGLSGEAGRNGKDGHP 343



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 78/169 (46%), Gaps = 26/169 (15%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKG 185
            K  RG  G PG  G  GP G+PG  G        GP G+ G+PGP G  G+ G  G  G
Sbjct: 36  CKSSRGSPGQPGTPGISGPAGLPGTVGAHGPAGPNGPPGERGFPGPIGPKGNAGLPGKPG 95

Query: 186 DMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            MG PG  GLDG+    GLPG PG +G  G  G  G  G  GL G  G PG  G  GE G
Sbjct: 96  KMGVPGIPGLDGQIGASGLPGRPGCNGTKGETGPAGPQGVPGLRGATGAPGNFGAKGEPG 155

Query: 243 --------MTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
                   +TGP G RG       PG P    Y  E C   P+ E  QL
Sbjct: 156 SVNVDLSKLTGPAGPRGS------PGAPGPQGYTGE-CG--PSGEPGQL 195



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 78/157 (49%), Gaps = 20/157 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G  G +GA G  G  G  GE+G PG +GP G  G+PG  GK      MG PG 
Sbjct: 49  PGISGPAGLPGTVGAHGPAGPNGPPGERGFPGPIGPKGNAGLPGKPGK------MGVPG- 101

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG- 230
             IPG +G+    G  G PGR G +G  G  G  G  G+PG  G  G PG  G  G+ G 
Sbjct: 102 --IPGLDGQ---IGASGLPGRPGCNGTKGETGPAGPQGVPGLRGATGAPGNFGAKGEPGS 156

Query: 231 -------IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                  + G  G  G  G  GP+G  G+ G +G PG
Sbjct: 157 VNVDLSKLTGPAGPRGSPGAPGPQGYTGECGPSGEPG 193


>gi|148689378|gb|EDL21325.1| procollagen, type VII, alpha 1 [Mus musculus]
          Length = 2944

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 90/155 (58%), Gaps = 24/155 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
            PG +G  G+ G+ G+ G +GV+G  G K  PG  G PG  G PG +G    RG KGD+G+
Sbjct: 2550 PGDKGSKGEPGDKGSAGSIGVRGLTGPKAKPGAAGIPGEPGAPGKDGIPGFRGDKGDIGF 2609

Query: 169  PGPQGIPGD---------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             GP+G+ G+         +G+RG KG+ G+PGR GL G+ G  GEPGL            
Sbjct: 2610 MGPRGLKGEKGIKGTCGRDGERGDKGEAGFPGRPGLAGKKGDMGEPGL------------ 2657

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            PG+ G PGK+G+ G  G  G  G +GP+G++G+ G
Sbjct: 2658 PGQSGAPGKEGLIGPKGDRGFDGQSGPKGDQGEKG 2692



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 73/131 (55%), Gaps = 11/131 (8%)

Query: 128  GEMGVKGERGEKGAPGVV--GPPGPQGIPGDEG------KRGPKGDMGYPGPQGIPGDEG 179
            G  G  G +GE+GAPG+   G PGP+G PGD G      + GP GD G PG +G PG  G
Sbjct: 1560 GPRGASGSKGEQGAPGLALPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPG 1619

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---DGIPGTNG 236
              GP G  G  G  G  G +G+PGEPGL G  G  G+ G PG  G  G+    G PG +G
Sbjct: 1620 SPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPVGEKGDQGDPGEDG 1679

Query: 237  TNGEKGMTGPR 247
             NG  G +GP+
Sbjct: 1680 RNGSPGSSGPK 1690



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 89/166 (53%), Gaps = 21/166 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDM 166
            G  GP G KG++G +G  G+ G++G +G  G  G  G +G PGD+G       RG  G  
Sbjct: 2518 GPPGPRGAKGDMGERGPRGIDGDKGPRGESGNPGDKGSKGEPGDKGSAGSIGVRGLTGPK 2577

Query: 167  GYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
              PG  GIPG+ G          RG KGD+G+ G  GL G  G+ G  G DG  G  G  
Sbjct: 2578 AKPGAAGIPGEPGAPGKDGIPGFRGDKGDIGFMGPRGLKGEKGIKGTCGRDGERGDKGEA 2637

Query: 218  GIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG+ GL GK       G+PG +G  G++G+ GP+G+RG  G +G
Sbjct: 2638 GFPGRPGLAGKKGDMGEPGLPGQSGAPGKEGLIGPKGDRGFDGQSG 2683



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 88/183 (48%), Gaps = 40/183 (21%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------V 144
            G      E   PG++G  G  G+ G +G +G  G RGE+G  G                +
Sbjct: 2457 GLPGPRGERGEPGVRGEDGHPGQEGPRGLVGPPGSRGEQGEKGAAGAAGLKGDKGDSAVI 2516

Query: 145  VGPPGPQGIPGDEGKRGPKG---------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
             GPPGP+G  GD G+RGP+G         + G       PGD+G +G  GD G  G IG+
Sbjct: 2517 EGPPGPRGAKGDMGERGPRGIDGDKGPRGESGN------PGDKGSKGEPGDKGSAGSIGV 2570

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                      GL G   + G  GIPG+ G PGKDGIPG  G  G+ G  GPRG +G+ GI
Sbjct: 2571 R---------GLTGPKAKPGAAGIPGEPGAPGKDGIPGFRGDKGDIGFMGPRGLKGEKGI 2621

Query: 256  NGV 258
             G 
Sbjct: 2622 KGT 2624



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 84/196 (42%), Gaps = 50/196 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------- 158
            PG+ GP G +G  G  GE GVKGERG  G      P GPQG+PG  G             
Sbjct: 1471 PGMTGPKGDRGLTGTPGEPGVKGERGHPG------PVGPQGLPGAAGHPGVEGPEGPPGP 1524

Query: 159  --KRGPKGDMGYPGPQGI----------------PGDEGKRGPKGDMGYPGRIGLDGRDG 200
              +RG KG+ G PG   +                PG  G  G KG+ G PG         
Sbjct: 1525 TGRRGEKGEPGRPGDPAVGPGGAGAKGEKGEAGLPGPRGASGSKGEQGAPGLA------- 1577

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK------SG 254
            LPG+PG  G PG  G  G+ G+ G  G  G PG  G  G  G  GP G RG+       G
Sbjct: 1578 LPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRGRDGEAGEKG 1637

Query: 255  INGVPGTPAICAYKRE 270
              G+PG P +     E
Sbjct: 1638 DEGIPGEPGLPGKAGE 1653



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 3/104 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GPIG  G  G  G+ G  GE+GE G PG  GP GP+G    +G+ G KGD G PG 
Sbjct: 1588 PGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRG---RDGEAGEKGDEGIPGE 1644

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G+PG  G+RG +G  G  G +G  G  G PGE G +G PG +G
Sbjct: 1645 PGLPGKAGERGLRGAPGPRGPVGEKGDQGDPGEDGRNGSPGSSG 1688



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 79/176 (44%), Gaps = 38/176 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE G KG  G  GERG+KG  G        G PG  GK+G  G+ G PG  
Sbjct: 2608 GFMGPRGLKGEKGIKGTCGRDGERGDKGEAGF------PGRPGLAGKKGDMGEPGLPGQS 2661

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------------- 204
            G PG EG  GPKGD G+ G+ G  G  G  GE                            
Sbjct: 2662 GAPGKEGLIGPKGDRGFDGQSGPKGDQGEKGERGPPGVGGFPGPRGNDGSSGPPGPPGGV 2721

Query: 205  --PGLDGIPGRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
               G +G+ G+ G  G PG+   G PG  G PG  G  G  G  GPRG +G++ + 
Sbjct: 2722 GPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALT 2777



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 97/234 (41%), Gaps = 47/234 (20%)

Query: 106  TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGK 159
             +E  PPGL+G    KGE G+ G+ G KG+RG  G  G VG PG +      G+PG+ G 
Sbjct: 2095 AREQGPPGLKG---AKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRGHDGNPGLPGERGV 2151

Query: 160  RGPKGDMGYPGPQGIPGDEGK------------------RGPKGDMGYPGRIGLDGRDGL 201
             GP+G  G  GP+G PG  G                   +GP G  G PG  G  GR   
Sbjct: 2152 AGPEGKPGLQGPRGTPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLP 2211

Query: 202  P--------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                                 G PGL G  G  G  G PG+DG  GKDG  G+ G  G  
Sbjct: 2212 GPVGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGVPGSP 2271

Query: 242  GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHI 295
            G+ GP G +G+ G  G PG   +     +     P      LL  P   G   +
Sbjct: 2272 GLPGPVGPKGEPGPVGAPGQVVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGL 2325



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 96/250 (38%), Gaps = 104/250 (41%)

Query: 112  PGLQGPIGQKGEIGAK-----------------------------------------GEM 130
            PG QGP G+ GE G K                                         GE 
Sbjct: 1430 PGPQGPAGRPGEKGEKGDCEDGGPGLPGQPGPPGEPGLRGAPGMTGPKGDRGLTGTPGEP 1489

Query: 131  GVKGERG---------------------------------EKGAPG-----VVGP----- 147
            GVKGERG                                 EKG PG      VGP     
Sbjct: 1490 GVKGERGHPGPVGPQGLPGAAGHPGVEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGA 1549

Query: 148  ---------PGPQGIPGDEGKRGPKGDM--GYPGPQGIPGDE------GKRGPKGDMGYP 190
                     PGP+G  G +G++G  G    G PGP+G PGD       G+ GP GD G P
Sbjct: 1550 KGEKGEAGLPGPRGASGSKGEQGAPGLALPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPP 1609

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G  GR   PG PG  G  GR+G  G  G +G+PG+ G+PG  G  G +G  GPRG  
Sbjct: 1610 GEKGEPGR---PGSPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPV 1666

Query: 251  GKSGINGVPG 260
            G+ G  G PG
Sbjct: 1667 GEKGDQGDPG 1676



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 87/222 (39%), Gaps = 77/222 (34%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G+KG+ GA G  G  G +GE+GAPG  G  GP G+PG  G  G +G  G PG 
Sbjct: 1844 PGEDGRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQVGPPG-QGFPGVPGI 1902

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDG---------------------------------- 197
             G  GD G+ G KG+ G PG  GL G                                  
Sbjct: 1903 TGPKGDRGETGSKGEQGLPGERGLRGEPGSLPNAERLLETAGIKVSALREIVDTWDESSG 1962

Query: 198  --------RDGLPGEPGLDGIPGRNGMDGIPGKDGL------------------------ 225
                    R G  G+PG  G PG+ G+ G PG+ GL                        
Sbjct: 1963 SFLPVPERRPGPKGDPGDRGPPGKEGLIGFPGERGLKGERGDPGPQGPPGLALGERGPPG 2022

Query: 226  ----------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                      PG  G+PG  G +GE G  G RG RG+ G  G
Sbjct: 2023 PPGLAGEPGKPGIPGLPGRAGGSGEAGRPGERGERGEKGERG 2064



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 95/247 (38%), Gaps = 88/247 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PGL G  G  GE G  GE G +GE+GE+G                           PG+ 
Sbjct: 2036 PGLPGRAGGSGEAGRPGERGERGEKGERGDQGRDGLPGLPGPPGPPGPKVAIEEPGPGLA 2095

Query: 146  ---GPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
               GPPG    +G PG +G  GPKGD G PG +G  G+ GKRG  G+ G PG  G+ G +
Sbjct: 2096 REQGPPGLKGAKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRGHDGNPGLPGERGVAGPE 2155

Query: 200  GLPGEPGLDGIP------------------------GRNGMDGIPGKD------------ 223
            G PG  G  G P                        G +G+ G PG+             
Sbjct: 2156 GKPGLQGPRGTPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPVG 2215

Query: 224  --------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                                GLPG+ G  G  G  G  G +G  G+RG  G+ G PG P 
Sbjct: 2216 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGVPGSPGLPG 2275

Query: 264  ICAYKRE 270
                K E
Sbjct: 2276 PVGPKGE 2282



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 95/270 (35%), Gaps = 122/270 (45%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------------ 147
            PG+ GP G +GE G+KGE G+ GERG +G PG + P                        
Sbjct: 1900 PGITGPKGDRGETGSKGEQGLPGERGLRGEPGSL-PNAERLLETAGIKVSALREIVDTWD 1958

Query: 148  -------------PGPQGIPGDEGKRGPKGDMGYPGPQGI-------------------- 174
                         PGP+G PGD G  G +G +G+PG +G+                    
Sbjct: 1959 ESSGSFLPVPERRPGPKGDPGDRGPPGKEGLIGFPGERGLKGERGDPGPQGPPGLALGER 2018

Query: 175  --------------------------------PGDEGKRGPKGDMGYPGR---------- 192
                                            PG+ G+RG KG+ G  GR          
Sbjct: 2019 GPPGPPGLAGEPGKPGIPGLPGRAGGSGEAGRPGERGERGEKGERGDQGRDGLPGLPGPP 2078

Query: 193  -------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDG 230
                                G  G  G  GEPG DG PG  G  G+PG     G PGK G
Sbjct: 2079 GPPGPKVAIEEPGPGLAREQGPPGLKGAKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRG 2138

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  GE+G+ GP G  G  G  G PG
Sbjct: 2139 HDGNPGLPGERGVAGPEGKPGLQGPRGTPG 2168



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 87/212 (41%), Gaps = 69/212 (32%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------ 159
            PG++G +G+ G+ G  G  G+ GERG  G  G  G  GP+G PG  G             
Sbjct: 2125 PGIKGDVGEPGKRGHDGNPGLPGERGVAGPEGKPGLQGPRGTPGPVGSHGDPGPPGAPGL 2184

Query: 160  ------RGPKGDMGYPG-----------------------------PQGIPGDEGKRGPK 184
                  +GP G  G PG                             PQG PG  G+ G  
Sbjct: 2185 AGPAGPQGPSGLKGEPGETGPPGRGLPGPVGAVGLPGPPGPSGLVGPQGSPGLPGQVGET 2244

Query: 185  GDMGYPGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPGK-----------DG 230
            G  G PGR G  G+DG    PG PG  G+PG  G  G PG  G PG+            G
Sbjct: 2245 GKPGPPGRDGSSGKDGDRGSPGVPGSPGLPGPVGPKGEPGPVGAPGQVVVGPPGAKGEKG 2304

Query: 231  IP--------GTNGTNGEKGMTGPRGNRGKSG 254
             P        G  G  G++G+ GPRG +G++G
Sbjct: 2305 APGDLAGALLGEPGAKGDRGLPGPRGEKGEAG 2336



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 73/151 (48%), Gaps = 36/151 (23%)

Query: 161  GPKGDMGYPGPQGIPGDEGKRGP------------KGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  G  G PG  G+PG  G+ GP             GD G P   GL+G++G PG+PG D
Sbjct: 1791 GASGKAGDPGRDGLPGLRGEHGPPGPPGPPGVPGKAGDDGKP---GLNGKNGDPGDPGED 1847

Query: 209  ---------GIPGRNGMD------GIPGKDGLPGKDGIPGTNGTNGEK-----GMTGPRG 248
                     G PGR G D      G PG  GL G  G+PG  G  G+      G+TGP+G
Sbjct: 1848 GRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQVGPPGQGFPGVPGITGPKG 1907

Query: 249  NRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
            +RG++G  G  G P     + E  S LPN+E
Sbjct: 1908 DRGETGSKGEQGLPGERGLRGEPGS-LPNAE 1937



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 81/197 (41%), Gaps = 60/197 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G +G+ G+ G  G  G  G+ G++G+PGV   PG  G+PG      P G  G PGP
Sbjct: 2235 PGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGV---PGSPGLPG------PVGPKGEPGP 2285

Query: 172  QGIPGD--EGKRGPKGDMGYPGRI--------GLDGRDGLPGEPGLDGIPGR-------- 213
             G PG    G  G KG+ G PG +        G  G  GLPG  G  G  GR        
Sbjct: 2286 VGAPGQVVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGLPGPRGEKGEAGRAGGPGDPG 2345

Query: 214  -NGMDGIPGKDGLPGKDGI--------------------------------PGTNGTNGE 240
             +G  G PG  GL G+ GI                                PG  G  GE
Sbjct: 2346 EDGQKGAPGLKGLKGEPGIGVQGPPGPSGPPGMKGDLGPPGAPGAPGVVGFPGQTGPRGE 2405

Query: 241  KGMTGPRGNRGKSGING 257
             G  GP G RG +G  G
Sbjct: 2406 TGQPGPVGERGLAGPPG 2422



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 97/270 (35%), Gaps = 106/270 (39%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S     P G  G  G+KG+ G  GE G+ G+ GE+G  G  GP GP G  GD+G  
Sbjct: 1616 GRPGSPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPVGEKGDQGDP 1675

Query: 161  GPKGDMGYPGP----------------------------QGIPGDE-------------- 178
            G  G  G PG                             +G PG E              
Sbjct: 1676 GEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDAGIESRDKGEPGQEGPRGPKGDPGPPGV 1735

Query: 179  -GKRG------------------PKGDMGYPGRIGLDGRDGL------------------ 201
             G+RG                  P GD G  G  GLDGR GL                  
Sbjct: 1736 SGERGIDGLRGPPGPQGDPGVRGPAGDKGDRGPPGLDGRSGLDGKPGAPGPPGLHGASGK 1795

Query: 202  PGEPGLDGIPG------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G+PG DG+PG                  + G DG PG +G  G  G PG +G  GEKG 
Sbjct: 1796 AGDPGRDGLPGLRGEHGPPGPPGPPGVPGKAGDDGKPGLNGKNGDPGDPGEDGRKGEKGD 1855

Query: 244  T---------GPRGNRGKSGINGVPGTPAI 264
            +         GP+G RG  G  G+ G P +
Sbjct: 1856 SGAPGREGPDGPKGERGAPGNPGLQGPPGL 1885



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 15/110 (13%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            + + G    T +  PPG +G  G+ G  G  G  G  GE GEKG  G+   PG  G+PG 
Sbjct: 1594 IGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRGRDGEAGEKGDEGI---PGEPGLPGK 1650

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             G+RG +   G PGP+G  G+      KGD G PG    DGR+G PG  G
Sbjct: 1651 AGERGLR---GAPGPRGPVGE------KGDQGDPGE---DGRNGSPGSSG 1688



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 64/143 (44%), Gaps = 43/143 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G   + G+ G  GE G KGE+G+ GAPG               + GP         
Sbjct: 1832 PGLNG---KNGDPGDPGEDGRKGEKGDSGAPG---------------REGPD-------- 1865

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                      GPKG+ G PG  GL G  GLPG+ G  G        G PG  G+ G  G 
Sbjct: 1866 ----------GPKGERGAPGNPGLQGPPGLPGQVGPPG-------QGFPGVPGITGPKGD 1908

Query: 232  PGTNGTNGEKGMTGPRGNRGKSG 254
             G  G+ GE+G+ G RG RG+ G
Sbjct: 1909 RGETGSKGEQGLPGERGLRGEPG 1931



 Score = 43.1 bits (100), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 70/154 (45%), Gaps = 29/154 (18%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---- 186
            G KG+RGE+G      PPGP     ++G  G  G  G PGPQG  G  G++G KGD    
Sbjct: 1398 GDKGDRGERG------PPGPGIGASEQGDPGLPGLPGSPGPQGPAGRPGEKGEKGDCEDG 1451

Query: 187  ----------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
                             G PG  G  G  GL G PG  G+ G  G  G  G  GLPG  G
Sbjct: 1452 GPGLPGQPGPPGEPGLRGAPGMTGPKGDRGLTGTPGEPGVKGERGHPGPVGPQGLPGAAG 1511

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             PG  G  G  G TG    RG+ G  G PG PA+
Sbjct: 1512 HPGVEGPEGPPGPTG---RRGEKGEPGRPGDPAV 1542



 Score = 43.1 bits (100), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 67/161 (41%), Gaps = 37/161 (22%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G C    E    G  G  G+ G  G KG+MG  G  G+ GAPG  G  GP+G  G +
Sbjct: 2620 GIKGTCGRDGERGDKGEAGFPGRPGLAGKKGDMGEPGLPGQSGAPGKEGLIGPKGDRGFD 2679

Query: 158  GKRGPKGDMGYPGPQ---------------------------------GIPGDEGKRGPK 184
            G+ GPKGD G  G +                                 G+ G +G+RGP 
Sbjct: 2680 GQSGPKGDQGEKGERGPPGVGGFPGPRGNDGSSGPPGPPGGVGPKGPEGLQGQKGERGPP 2739

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G+      +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 2740 GES----VVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAAL 2776



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 84/220 (38%), Gaps = 85/220 (38%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP--------------GD-- 156
            GL GP G+KGE G  G  G  GE G+KGAPG+ G  G  GI               GD  
Sbjct: 2324 GLPGPRGEKGEAGRAGGPGDPGEDGQKGAPGLKGLKGEPGIGVQGPPGPSGPPGMKGDLG 2383

Query: 157  -------------EGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
                          G+ GP+G+ G PGP    G+ G  GP                    
Sbjct: 2384 PPGAPGAPGVVGFPGQTGPRGETGQPGPV---GERGLAGPPGREGAPGPLGPPGPPGSAG 2440

Query: 184  -------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   KGD G PG        GLPG  G  G PG  G DG PG++G  G  G PG+ G
Sbjct: 2441 APGASGLKGDKGDPG-------AGLPGPRGERGEPGVRGEDGHPGQEGPRGLVGPPGSRG 2493

Query: 237  TNGE-------------------KGMTGPRGNRGKSGING 257
              GE                   +G  GPRG +G  G  G
Sbjct: 2494 EQGEKGAAGAAGLKGDKGDSAVIEGPPGPRGAKGDMGERG 2533


>gi|426338026|ref|XP_004032993.1| PREDICTED: collagen alpha-1(III) chain [Gorilla gorilla gorilla]
          Length = 1466

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 74/128 (57%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGEMG  G  G  G  G  GPPGP G  G  G RG  G+ G  G +G PG  G+RG  G 
Sbjct: 395 KGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGI 454

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +GIPG  G  GE+G  GP
Sbjct: 455 PGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGP 514

Query: 247 RGNRGKSG 254
            G RG +G
Sbjct: 515 AGPRGAAG 522



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 66/127 (51%), Gaps = 18/127 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-------- 147
           L+  +G          PGL+G  G+ G+ GAKGE G +GERGE G PGV G         
Sbjct: 409 LMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDG 468

Query: 148 ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
               PG  G+PG  G+RG  G  G  GP GIPG+   +GP G+ G PG  G  G     G
Sbjct: 469 SPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGE---KGPAGERGAPGPAGPRG---AAG 522

Query: 204 EPGLDGI 210
           EPG DG+
Sbjct: 523 EPGRDGV 529



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 84/198 (42%), Gaps = 66/198 (33%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
           PGL+G  G  GE GA G MG +G  GE+G PG+   PG  G  G++G RG          
Sbjct: 281 PGLKGENGLPGENGAPGPMGPRGAPGERGRPGL---PGAAGARGNDGARGSDGQPGPPGP 337

Query: 164 ----------------GDMGYPGPQGIPGDEGKRGP---------------------KGD 186
                           G  G PG  G+PG  G+ GP                     KG+
Sbjct: 338 PGTAGFPGSPGAKGEVGPAGSPGSNGVPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGE 397

Query: 187 M---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           M   G PG  GL G  G PG  G +G PG  G  G PGK               NG KG 
Sbjct: 398 MGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGK---------------NGAKGE 442

Query: 244 TGPRGNRGKSGINGVPGT 261
            GPRG RG++GI GVPG 
Sbjct: 443 PGPRGERGEAGIPGVPGA 460



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 81/186 (43%), Gaps = 39/186 (20%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  G+ G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG+NG  G++G  GP+G+                  +G+ G  G+PG P
Sbjct: 348 GAKGEVGPAGSPGSNGVPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407

Query: 263 AICAYK 268
            +   +
Sbjct: 408 GLMGAR 413



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 30/51 (58%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG QGP G KGE G +G  G+KG RG  G PG  G PGP G  G  G  GP
Sbjct: 1085 PGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGP 1135



 Score = 39.3 bits (90), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 55/145 (37%), Gaps = 57/145 (39%)

Query: 146  GPPGPQ---GIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRG----- 182
            GP GP    G PG  G  GPKGD G PG +G               I G  G RG     
Sbjct: 903  GPAGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPP 962

Query: 183  -------------PKGDMGYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMD 217
                          KG+ G PG  GL G              G  GEP         G D
Sbjct: 963  GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEP---------GRD 1013

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG DGLPG+DG PG  G  GE G
Sbjct: 1014 GNPGSDGLPGRDGSPGGKGDRGENG 1038


>gi|397509824|ref|XP_003825312.1| PREDICTED: collagen alpha-1(III) chain [Pan paniscus]
          Length = 1466

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 74/128 (57%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGEMG  G  G  G  G  GPPGP G  G  G RG  G+ G  G +G PG  G+RG  G 
Sbjct: 395 KGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGI 454

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +GIPG  G  GE+G  GP
Sbjct: 455 PGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGP 514

Query: 247 RGNRGKSG 254
            G RG +G
Sbjct: 515 AGPRGAAG 522



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 66/127 (51%), Gaps = 18/127 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-------- 147
           L+  +G          PGL+G  G+ G+ GAKGE G +GERGE G PGV G         
Sbjct: 409 LMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDG 468

Query: 148 ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
               PG  G+PG  G+RG  G  G  GP GIPG+   +GP G+ G PG  G  G     G
Sbjct: 469 SPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGE---KGPAGERGAPGPAGPRG---AAG 522

Query: 204 EPGLDGI 210
           EPG DG+
Sbjct: 523 EPGRDGV 529



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 88/214 (41%), Gaps = 63/214 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306

Query: 171 PQ---GIPGDEGKR---------------------------GPKGDMGYPGRIGLDGRDG 200
            +   G+PG  G R                           G KG++G  G  G +G  G
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG 366

Query: 201 LPGEP------------------------------GLDGIPGRNGMDGIP---GKDGLPG 227
             GEP                              G+ G PG  G  G P   G +G PG
Sbjct: 367 QRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPG 426

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G NG KG  GPRG RG++GI GVPG 
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGA 460



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 81/186 (43%), Gaps = 39/186 (20%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  G+ G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG+NG  G++G  GP+G+                  +G+ G  G+PG P
Sbjct: 348 GAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407

Query: 263 AICAYK 268
            +   +
Sbjct: 408 GLMGAR 413



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 30/51 (58%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG QGP G KGE G +G  G+KG RG  G PG  G PGP G  G  G  GP
Sbjct: 1085 PGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGP 1135



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 56/145 (38%), Gaps = 57/145 (39%)

Query: 146  GPPGPQG---IPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRG----- 182
            GPPGP G    PG  G  GPKGD G PG +G               I G  G RG     
Sbjct: 903  GPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPP 962

Query: 183  -------------PKGDMGYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMD 217
                          KG+ G PG  GL G              G  GEPG          D
Sbjct: 963  GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPG---------RD 1013

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG DGLPG+DG PG  G  GE G
Sbjct: 1014 GTPGSDGLPGRDGSPGGKGDRGENG 1038


>gi|4502951|ref|NP_000081.1| collagen alpha-1(III) chain preproprotein [Homo sapiens]
 gi|114582176|ref|XP_001163809.1| PREDICTED: collagen alpha-1(III) chain isoform 10 [Pan troglodytes]
 gi|30058|emb|CAA32583.1| prepro-alpha-1 type 3 collagen [Homo sapiens]
 gi|16197601|gb|AAL13167.1| type III preprocollagen alpha 1 chain [Homo sapiens]
 gi|119631315|gb|EAX10910.1| collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV,
           autosomal dominant), isoform CRA_b [Homo sapiens]
 gi|119631316|gb|EAX10911.1| collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV,
           autosomal dominant), isoform CRA_b [Homo sapiens]
 gi|168277510|dbj|BAG10733.1| collagen alpha-1(III) chain precursor [synthetic construct]
          Length = 1466

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 74/128 (57%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGEMG  G  G  G  G  GPPGP G  G  G RG  G+ G  G +G PG  G+RG  G 
Sbjct: 395 KGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGI 454

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +GIPG  G  GE+G  GP
Sbjct: 455 PGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGP 514

Query: 247 RGNRGKSG 254
            G RG +G
Sbjct: 515 AGPRGAAG 522



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/154 (47%), Positives = 79/154 (51%), Gaps = 18/154 (11%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPKGDMGYPGPQGIP 175
           GAKGE+G  G  G  GAPG  G PGPQG          PG  G  G KG+MG  G  G P
Sbjct: 348 GAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPG------EPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G RGP G  G  G  GL G  G PG      EPG  G  G  G+ G+PG  G  GKD
Sbjct: 408 GLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKD 467

Query: 230 GIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
           G PG  G NG  G  G RG    RG +G NG+PG
Sbjct: 468 GSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPG 501



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 66/127 (51%), Gaps = 18/127 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-------- 147
           L+  +G          PGL+G  G+ G+ GAKGE G +GERGE G PGV G         
Sbjct: 409 LMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDG 468

Query: 148 ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
               PG  G+PG  G+RG  G  G  GP GIPG+   +GP G+ G PG  G     G  G
Sbjct: 469 SPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGE---KGPAGERGAPGPAGP---RGAAG 522

Query: 204 EPGLDGI 210
           EPG DG+
Sbjct: 523 EPGRDGV 529



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 88/214 (41%), Gaps = 63/214 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306

Query: 171 PQ---GIPGDEGKR---------------------------GPKGDMGYPGRIGLDGRDG 200
            +   G+PG  G R                           G KG++G  G  G +G  G
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG 366

Query: 201 LPGEP------------------------------GLDGIPGRNGMDGIP---GKDGLPG 227
             GEP                              G+ G PG  G  G P   G +G PG
Sbjct: 367 QRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPG 426

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G NG KG  GPRG RG++GI GVPG 
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGA 460



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 81/186 (43%), Gaps = 39/186 (20%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  G+ G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG+NG  G++G  GP+G+                  +G+ G  G+PG P
Sbjct: 348 GAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407

Query: 263 AICAYK 268
            +   +
Sbjct: 408 GLMGAR 413



 Score = 46.2 bits (108), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 30/51 (58%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG QGP G KGE G +G  G+KG RG  G PG  G PGP G  G  G  GP
Sbjct: 1085 PGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGP 1135



 Score = 42.7 bits (99), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 56/145 (38%), Gaps = 57/145 (39%)

Query: 146  GPPGPQG---IPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRG----- 182
            GPPGP G    PG  G  GPKGD G PG +G               I G  G RG     
Sbjct: 903  GPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPP 962

Query: 183  -------------PKGDMGYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMD 217
                          KG+ G PG  GL G              G  GEPG          D
Sbjct: 963  GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPG---------RD 1013

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG DGLPG+DG PG  G  GE G
Sbjct: 1014 GNPGSDGLPGRDGSPGGKGDRGENG 1038


>gi|124056490|sp|P02461.4|CO3A1_HUMAN RecName: Full=Collagen alpha-1(III) chain; Flags: Precursor
 gi|62988777|gb|AAY24164.1| unknown [Homo sapiens]
 gi|270048012|gb|ACZ58371.1| collagen, type III, alpha 1 [Homo sapiens]
          Length = 1466

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 74/128 (57%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGEMG  G  G  G  G  GPPGP G  G  G RG  G+ G  G +G PG  G+RG  G 
Sbjct: 395 KGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGI 454

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +GIPG  G  GE+G  GP
Sbjct: 455 PGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGP 514

Query: 247 RGNRGKSG 254
            G RG +G
Sbjct: 515 AGPRGAAG 522



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/154 (47%), Positives = 79/154 (51%), Gaps = 18/154 (11%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPKGDMGYPGPQGIP 175
           GAKGE+G  G  G  GAPG  G PGPQG          PG  G  G KG+MG  G  G P
Sbjct: 348 GAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPG------EPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G RGP G  G  G  GL G  G PG      EPG  G  G  G+ G+PG  G  GKD
Sbjct: 408 GLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKD 467

Query: 230 GIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
           G PG  G NG  G  G RG    RG +G NG+PG
Sbjct: 468 GSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPG 501



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 66/127 (51%), Gaps = 18/127 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-------- 147
           L+  +G          PGL+G  G+ G+ GAKGE G +GERGE G PGV G         
Sbjct: 409 LMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDG 468

Query: 148 ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
               PG  G+PG  G+RG  G  G  GP GIPG+   +GP G+ G PG  G     G  G
Sbjct: 469 SPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGE---KGPAGERGAPGPAGP---RGAAG 522

Query: 204 EPGLDGI 210
           EPG DG+
Sbjct: 523 EPGRDGV 529



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 88/214 (41%), Gaps = 63/214 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306

Query: 171 PQ---GIPGDEGKR---------------------------GPKGDMGYPGRIGLDGRDG 200
            +   G+PG  G R                           G KG++G  G  G +G  G
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG 366

Query: 201 LPGEP------------------------------GLDGIPGRNGMDGIP---GKDGLPG 227
             GEP                              G+ G PG  G  G P   G +G PG
Sbjct: 367 QRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPG 426

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G NG KG  GPRG RG++GI GVPG 
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGA 460



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 81/186 (43%), Gaps = 39/186 (20%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  G+ G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG+NG  G++G  GP+G+                  +G+ G  G+PG P
Sbjct: 348 GAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407

Query: 263 AICAYK 268
            +   +
Sbjct: 408 GLMGAR 413



 Score = 46.2 bits (108), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 30/51 (58%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG QGP G KGE G +G  G+KG RG  G PG  G PGP G  G  G  GP
Sbjct: 1085 PGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGP 1135



 Score = 42.7 bits (99), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 56/145 (38%), Gaps = 57/145 (39%)

Query: 146  GPPGPQG---IPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRG----- 182
            GPPGP G    PG  G  GPKGD G PG +G               I G  G RG     
Sbjct: 903  GPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPP 962

Query: 183  -------------PKGDMGYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMD 217
                          KG+ G PG  GL G              G  GEPG          D
Sbjct: 963  GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPG---------RD 1013

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG DGLPG+DG PG  G  GE G
Sbjct: 1014 GNPGSDGLPGRDGSPGGKGDRGENG 1038


>gi|410350899|gb|JAA42053.1| collagen, type III, alpha 1 [Pan troglodytes]
          Length = 1466

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 74/128 (57%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGEMG  G  G  G  G  GPPGP G  G  G RG  G+ G  G +G PG  G+RG  G 
Sbjct: 395 KGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGI 454

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +GIPG  G  GE+G  GP
Sbjct: 455 PGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGP 514

Query: 247 RGNRGKSG 254
            G RG +G
Sbjct: 515 AGPRGAAG 522



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 66/127 (51%), Gaps = 18/127 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-------- 147
           L+  +G          PGL+G  G+ G+ GAKGE G +GERGE G PGV G         
Sbjct: 409 LMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDG 468

Query: 148 ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
               PG  G+PG  G+RG  G  G  GP GIPG+   +GP G+ G PG  G  G     G
Sbjct: 469 SPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGE---KGPAGERGAPGPAGPRG---AAG 522

Query: 204 EPGLDGI 210
           EPG DG+
Sbjct: 523 EPGRDGV 529



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 88/214 (41%), Gaps = 63/214 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306

Query: 171 PQ---GIPGDEGKR---------------------------GPKGDMGYPGRIGLDGRDG 200
            +   G+PG  G R                           G KG++G  G  G +G  G
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGDPG 366

Query: 201 LPGEP------------------------------GLDGIPGRNGMDGIP---GKDGLPG 227
             GEP                              G+ G PG  G  G P   G +G PG
Sbjct: 367 QRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPG 426

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G NG KG  GPRG RG++GI GVPG 
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGA 460



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 81/186 (43%), Gaps = 39/186 (20%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  G+ G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG+NG  G++G  GP+G+                  +G+ G  G+PG P
Sbjct: 348 GAKGEVGPAGSPGSNGDPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407

Query: 263 AICAYK 268
            +   +
Sbjct: 408 GLMGAR 413



 Score = 45.8 bits (107), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 30/51 (58%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG QGP G KGE G +G  G+KG RG  G PG  G PGP G  G  G  GP
Sbjct: 1085 PGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGP 1135



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 56/145 (38%), Gaps = 57/145 (39%)

Query: 146  GPPGPQG---IPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRG----- 182
            GPPGP G    PG  G  GPKGD G PG +G               I G  G RG     
Sbjct: 903  GPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPP 962

Query: 183  -------------PKGDMGYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMD 217
                          KG+ G PG  GL G              G  GEPG          D
Sbjct: 963  GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPG---------RD 1013

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG DGLPG+DG PG  G  GE G
Sbjct: 1014 GNPGSDGLPGRDGSPGGKGDRGENG 1038


>gi|350418539|ref|XP_003491890.1| PREDICTED: collagen alpha-2(IV) chain-like [Bombus impatiens]
          Length = 1839

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 104/228 (45%), Gaps = 54/228 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            G +GPIG  G  G KG+ G+ G+ G+ G PG+ G PGP+G+PG  G  GPKG +G PGP 
Sbjct: 1143 GERGPIGPPGYSGPKGKRGLDGDPGQMGLPGMPGDPGPRGLPGLMGAPGPKGMVGEPGPP 1202

Query: 172  ---------------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                                       QG  G  G++G KGDMG+PG +G  G  G PG 
Sbjct: 1203 SYGESERGDFGTPGLEGLQGEKGIRGEQGFIGLHGRKGMKGDMGFPGPVGFPGVPGFPGL 1262

Query: 205  PG---LDGIPGRNGM------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR-------- 247
            PG     G PG  G       DG+PG DGLPG  GIPG  G  GE G  GP+        
Sbjct: 1263 PGDRGPQGFPGLPGELAEPSEDGLPGLDGLPGTPGIPGQKGAPGEYGYNGPKGIMGDVGF 1322

Query: 248  ---------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
                     G+RG +G  G PG P +   +       P  E     +P
Sbjct: 1323 STRGPKGLPGDRGPAGFTGFPGAPGLEGLEGIPGLQGPKGEPGDRGLP 1370



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/183 (42%), Positives = 95/183 (51%), Gaps = 25/183 (13%)

Query: 112  PGLQGPIGQKGE--------IGAKGE---------MGVKGERGEKGAPGVVGPPGPQGIP 154
            PGLQGP G+ G+         G +GE          G+KGE GE G PG  G PG +G  
Sbjct: 1355 PGLQGPKGEPGDRGLPIFAIKGRQGEPGLPGFNGIKGIKGEIGEMGIPGREGLPGRRGQR 1414

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEG--------KRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            GD+G  G  G MG PGP+G  GD G        ++G  GD G PG  G  G  G+ GE G
Sbjct: 1415 GDDGDEGLSGAMGLPGPKGPKGDNGINPFSPFPRKGLPGDAGLPGLPGFPGIQGITGEQG 1474

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             DGIPGR G  G+ G  GLPG +G+ G+ G  G +G  G +G  G  G+ G P  PA  A
Sbjct: 1475 EDGIPGRKGEPGMEGLPGLPGPEGVVGSPGYPGLRGAIGRQGPPGSPGMRGSPAPPAPGA 1534

Query: 267  YKR 269
              R
Sbjct: 1535 RNR 1537



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 17/152 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+ G  GQ G++G +G +G+ G  G KG  G +GP G  G+PG+    GP+G++G PG 
Sbjct: 996  PGITGAKGQPGDVGPEGVIGIMGLPGPKGISGDIGPDGLDGLPGESAFSGPQGEVGEPGF 1055

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL--DGIPGRNGMDGIPGKDGLPGKD 229
             G            ++G PG  G+DGR G PGEPG+  DG PG  G+ G  G DG    +
Sbjct: 1056 MG------------ELGPPGFPGMDGRHGPPGEPGIGRDGSPGPKGIKGETGFDGF---N 1100

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+PG  G  G+ G  G +G RG  G+ G PG 
Sbjct: 1101 GLPGPKGEVGDMGPDGLKGPRGIWGLKGKPGA 1132



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 93/177 (52%), Gaps = 24/177 (13%)

Query: 100  QGFCNSTKEYCPP---GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG-----PPGPQ 151
            QGF     E   P   GL G  G  G  G  G+ G  GE G  G  G++G       GP+
Sbjct: 1269 QGFPGLPGELAEPSEDGLPGLDGLPGTPGIPGQKGAPGEYGYNGPKGIMGDVGFSTRGPK 1328

Query: 152  GIPGDEGKRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G+PGD   RGP G  G+PG       +GIPG +G +G  GD G P    + GR G PG P
Sbjct: 1329 GLPGD---RGPAGFTGFPGAPGLEGLEGIPGLQGPKGEPGDRGLP-IFAIKGRQGEPGLP 1384

Query: 206  GLDGIPGRN---GMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGNRGKSGIN 256
            G +GI G     G  GIPG++GLPG+ G  G +   G +G  G+ GP+G +G +GIN
Sbjct: 1385 GFNGIKGIKGEIGEMGIPGREGLPGRRGQRGDDGDEGLSGAMGLPGPKGPKGDNGIN 1441



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 90/189 (47%), Gaps = 37/189 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-------------IPGDEG 158
           PGL G  G KG  G +G MG +G  G+ G PG+ GP GP+G             +PGD G
Sbjct: 580 PGLSGLRGFKGVQGKRGIMGPRGLEGDSGRPGIAGPQGPKGEMGKLTWPDKLTRMPGDIG 639

Query: 159 KRG------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG---RDGLPG------ 203
            +G      P+G  G PG +G  G +G +G KGD G PG  G DG    DG+PG      
Sbjct: 640 DKGFPGVEGPRGPRGQPGSRGDTGIQGPKGEKGDFGPPGFTGRDGFARPDGIPGLPGDNV 699

Query: 204 ---------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                    EPG  GIPG  G  G  G  G PG+   P      GEKG  G RG+ G+ G
Sbjct: 700 SIPKEFLRGEPGFPGIPGGKGPMGDKGGKGEPGESYPPPVINLKGEKGYKGERGDIGEDG 759

Query: 255 INGVPGTPA 263
             GV G P 
Sbjct: 760 AKGVEGWPG 768



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 100/204 (49%), Gaps = 58/204 (28%)

Query: 112 PGLQGPIGQKGEIGA------------KGEMGVKGERG---EKGAPGVVGPPGPQGIPGD 156
           PG +GP+G KG  G             KGE G KGERG   E GA GV G PG +G PG 
Sbjct: 716 PGGKGPMGDKGGKGEPGESYPPPVINLKGEKGYKGERGDIGEDGAKGVEGWPGDEGFPGL 775

Query: 157 EG--------KRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIGLDGRDGLP 202
            G        ++GP G  GYPG   +PGD+G RG       +G MG+ GR+G  G  G P
Sbjct: 776 PGISGSPGISRQGPVGLKGYPG---MPGDQGPRGTSGTPGSQGPMGFTGRLGNKGDRGEP 832

Query: 203 ---------------------GEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTN 238
                                G+PG  G+ GR G+DG+    G  G PG++G+ G  G  
Sbjct: 833 GSNQTYGDYGLMGWTGNKGDVGDPGPRGLQGRPGVDGVKGAKGSKGAPGQEGLTGLQGAK 892

Query: 239 GEKGMT--GPRGNRGKSGINGVPG 260
           G++G +  GPRG  G +G  G+PG
Sbjct: 893 GQRGYSTQGPRGFPGMAGQPGMPG 916



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 93/202 (46%), Gaps = 31/202 (15%)

Query: 98   AMQGFCNSTKEYCPPGLQGP------IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
             + G      +  P GL+GP       G+ G  G  G  GVKGERG  G PG  GP G +
Sbjct: 1101 GLPGPKGEVGDMGPDGLKGPRGIWGLKGKPGAYGIHGLPGVKGERGPIGPPGYSGPKGKR 1160

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD----GRDGLPGEPGL 207
            G+ GD G+ G  G  G PGP+G+PG  G  GPKG +G PG         G  G PG  GL
Sbjct: 1161 GLDGDPGQMGLPGMPGDPGPRGLPGLMGAPGPKGMVGEPGPPSYGESERGDFGTPGLEGL 1220

Query: 208  D------------GIPGRNGMD---GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG---- 248
                         G+ GR GM    G PG  G PG  G PG  G  G +G  G  G    
Sbjct: 1221 QGEKGIRGEQGFIGLHGRKGMKGDMGFPGPVGFPGVPGFPGLPGDRGPQGFPGLPGELAE 1280

Query: 249  --NRGKSGINGVPGTPAICAYK 268
                G  G++G+PGTP I   K
Sbjct: 1281 PSEDGLPGLDGLPGTPGIPGQK 1302



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 94/192 (48%), Gaps = 35/192 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGE------RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            GL GP G  G+IG  G  G+ GE      +GE G PG +G  GP G PG +G+ GP G+ 
Sbjct: 1018 GLPGPKGISGDIGPDGLDGLPGESAFSGPQGEVGEPGFMGELGPPGFPGMDGRHGPPGEP 1077

Query: 167  GY-----PGPQGIPGD------EGKRGPKGDM------------------GYPGRIGLDG 197
            G      PGP+GI G+       G  GPKG++                  G PG  G+ G
Sbjct: 1078 GIGRDGSPGPKGIKGETGFDGFNGLPGPKGEVGDMGPDGLKGPRGIWGLKGKPGAYGIHG 1137

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G+ GE G  G PG +G  G  G DG PG+ G+PG  G  G +G+ G  G  G  G+ G
Sbjct: 1138 LPGVKGERGPIGPPGYSGPKGKRGLDGDPGQMGLPGMPGDPGPRGLPGLMGAPGPKGMVG 1197

Query: 258  VPGTPAICAYKR 269
             PG P+    +R
Sbjct: 1198 EPGPPSYGESER 1209



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 102/203 (50%), Gaps = 42/203 (20%)

Query: 86  VWLNAYSRIPL-VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
            W +  +R+P  +  +GF         PG++GP G +G+ G++G+ G++G +GEKG    
Sbjct: 626 TWPDKLTRMPGDIGDKGF---------PGVEGPRGPRGQPGSRGDTGIQGPKGEKGD--- 673

Query: 145 VGPPG---------PQGIPGDEG------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            GPPG         P GIPG  G      K   +G+ G+PG   IPG +G  G KG  G 
Sbjct: 674 FGPPGFTGRDGFARPDGIPGLPGDNVSIPKEFLRGEPGFPG---IPGGKGPMGDKGGKGE 730

Query: 190 PGR------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN----- 238
           PG       I L G  G  GE G  G  G  G++G PG +G PG  GI G+ G +     
Sbjct: 731 PGESYPPPVINLKGEKGYKGERGDIGEDGAKGVEGWPGDEGFPGLPGISGSPGISRQGPV 790

Query: 239 GEKGMTGPRGNRGKSGINGVPGT 261
           G KG  G  G++G  G +G PG+
Sbjct: 791 GLKGYPGMPGDQGPRGTSGTPGS 813



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 91/180 (50%), Gaps = 40/180 (22%)

Query: 112  PGLQGPIGQKGEIGAKGEM---------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PGL G  G +G  G  GE+         G+ G  G  G PG       +G PG+ G  GP
Sbjct: 1260 PGLPGDRGPQGFPGLPGELAEPSEDGLPGLDGLPGTPGIPGQ------KGAPGEYGYNGP 1313

Query: 163  KGDMG-----YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIP 211
            KG MG       GP+G+PGD   RGP G  G+PG  GL+G +G+P      GEPG  G+P
Sbjct: 1314 KGIMGDVGFSTRGPKGLPGD---RGPAGFTGFPGAPGLEGLEGIPGLQGPKGEPGDRGLP 1370

Query: 212  -----GRNGMDGIPGKDGLP------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                 GR G  G+PG +G+       G+ GIPG  G  G +G  G  G+ G SG  G+PG
Sbjct: 1371 IFAIKGRQGEPGLPGFNGIKGIKGEIGEMGIPGREGLPGRRGQRGDDGDEGLSGAMGLPG 1430



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 86/190 (45%), Gaps = 60/190 (31%)

Query: 119 GQKGEIGAKGEMGVKGER---------GEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMG 167
           G+ G+ G  GEMG++G           G KG PG+   GPPG  G PG            
Sbjct: 437 GEPGQDGLTGEMGLQGPPGAPGIPGLAGPKGFPGISIHGPPGLDGKPG------------ 484

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPG---RIG-------------LDGRDGLPGEPGLDGI- 210
           YPG  G+PGD G  GP+G  G+PG   RIG             L G DG PG PG  G+ 
Sbjct: 485 YPGVPGLPGDRGDHGPQGPKGFPGKGSRIGGPPGERGLPGLPGLPGPDGFPGAPGFKGVK 544

Query: 211 --------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                               PG +G+DG PG  G PG  G+ G  G  G++G+ GPRG  
Sbjct: 545 GLKGDDCGVCTPGLAGRKGEPGDSGLDGYPGTPGYPGLSGLRGFKGVQGKRGIMGPRGLE 604

Query: 251 GKSGINGVPG 260
           G SG  G+ G
Sbjct: 605 GDSGRPGIAG 614



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 86/174 (49%), Gaps = 17/174 (9%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            GF      + PPG  G IG+ G  G KG   E G  G  G  G  G VG  GP G+ G  
Sbjct: 1063 GFPGMDGRHGPPGEPG-IGRDGSPGPKGIKGETGFDGFNGLPGPKGEVGDMGPDGLKGPR 1121

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G  G KG  G  G  G+PG +G+RGP G  GY G  G  G DG PG+ GL G+PG  G  
Sbjct: 1122 GIWGLKGKPGAYGIHGLPGVKGERGPIGPPGYSGPKGKRGLDGDPGQMGLPGMPGDPGPR 1181

Query: 218  GIPGKDGLPGKDGIPGTN-------------GTNGEKGMTGPRGNRGKSGINGV 258
            G+PG  G PG  G+ G               GT G +G+ G +G RG+ G  G+
Sbjct: 1182 GLPGLMGAPGPKGMVGEPGPPSYGESERGDFGTPGLEGLQGEKGIRGEQGFIGL 1235



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/109 (46%), Positives = 64/109 (58%), Gaps = 3/109 (2%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           ++G  G+KG  G KG  G KGE G KG  G  G  G +G+ G++G  GP+G  G  GP  
Sbjct: 268 VKGSRGEKGMRGDKGGYGRKGEPGMKGPHGRPGFAGTKGMKGEQGNDGPRGKQGAIGP-- 325

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            PG  G++G KG  GY G+ G DG DG  GEPG  G PG+ G  G PG+
Sbjct: 326 -PGPSGEKGEKGAPGYAGKPGPDGLDGELGEPGNQGPPGKQGAAGEPGQ 373



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 88/181 (48%), Gaps = 28/181 (15%)

Query: 92  SRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------- 141
           SR   V ++G+     +  P G  G  G +G +G  G +G KG+RGE G+          
Sbjct: 785 SRQGPVGLKGYPGMPGDQGPRGTSGTPGSQGPMGFTGRLGNKGDRGEPGSNQTYGDYGLM 844

Query: 142 -----PGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
                 G VG PGP+G+   PG +G +G KG  G PG +G+    G +G KG  GY    
Sbjct: 845 GWTGNKGDVGDPGPRGLQGRPGVDGVKGAKGSKGAPGQEGL---TGLQGAKGQRGYS--- 898

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
              G  G PG  G  G+PGR G  GI G  G PG DG+    G  GE G  G RG+ G +
Sbjct: 899 -TQGPRGFPGMAGQPGMPGRMGDVGITGPYGTPGFDGM---KGLKGEIGFMGRRGDDGDA 954

Query: 254 G 254
           G
Sbjct: 955 G 955



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 100/225 (44%), Gaps = 36/225 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--VVGPPGPQGIPGDEGKRGPKGDMGYP 169
            PG+ G  G KG  GA G+ G+ G +G KG  G    GP G  G+ G  G  G  GD+G  
Sbjct: 865  PGVDGVKGAKGSKGAPGQEGLTGLQGAKGQRGYSTQGPRGFPGMAGQPGMPGRMGDVGIT 924

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------------------EPGLD 208
            GP G PG +G +G KG++G+ GR G DG  G  G                     E G  
Sbjct: 925  GPYGTPGFDGMKGLKGEIGFMGRRGDDGDAGPMGYSGRDGAPGQPGPPGPDGADGETGES 984

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G+ GR G DG+PG  G  G+ G  G  G  G  G+ GP+G  G  G +G+ G P   A+ 
Sbjct: 985  GLSGRPGPDGMPGITGAKGQPGDVGPEGVIGIMGLPGPKGISGDIGPDGLDGLPGESAFS 1044

Query: 269  RESCSLLPNSETSQL-----LIPPTIVG--SEHIFSSSPIVVREG 306
                   P  E  +      L PP   G    H     P + R+G
Sbjct: 1045 G------PQGEVGEPGFMGELGPPGFPGMDGRHGPPGEPGIGRDG 1083



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 83/173 (47%), Gaps = 24/173 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-----IPGDEGKRGPKGDM 166
           PG+ G  G +G  G  GEMG  GERG+ G  G +G PG QG     + G +G  G +GD 
Sbjct: 188 PGIDGLEGFQGSYGIPGEMGYPGERGDMGYRGPMGLPGMQGEVGETVYGAKGTVGEQGDR 247

Query: 167 GYPGP----------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           G PGP                +G  G++G RG KG  G  G  G+ G  G PG  G  G+
Sbjct: 248 GEPGPPSKDEYKKTDTMYYPVKGSRGEKGMRGDKGGYGRKGEPGMKGPHGRPGFAGTKGM 307

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G DG  GK G     G PG +G  GEKG  G  G  G  G++G  G P 
Sbjct: 308 KGEQGNDGPRGKQGA---IGPPGPSGEKGEKGAPGYAGKPGPDGLDGELGEPG 357



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 88/180 (48%), Gaps = 33/180 (18%)

Query: 129 EMGVKGE---------------RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           E G  GE               RG  GAPG+ G PGP+G+ G +G  G  G  G  G  G
Sbjct: 89  EKGAAGEYGGTGEKGYRGDEGIRGFPGAPGIPGNPGPEGVMGPDGLDGCNGTDGRAGAPG 148

Query: 174 IPGDEGKR---GPKGD---MGYPGRIGLD--GRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +PG  G+R   GP+GD   +G PG  G++  G  G+ G PG+DG+ G  G  GIPG+ G 
Sbjct: 149 LPGMHGERGLPGPQGDPGIIGEPGDGGINSVGVKGIRGNPGIDGLEGFQGSYGIPGEMGY 208

Query: 226 PGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           PG+          G+PG  G  GE  + G +G  G+ G  G PG P+   YK+      P
Sbjct: 209 PGERGDMGYRGPMGLPGMQGEVGET-VYGAKGTVGEQGDRGEPGPPSKDEYKKTDTMYYP 267



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 85/182 (46%), Gaps = 22/182 (12%)

Query: 113 GLQGPIGQKGEIGAKGE-----MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           GL GP G  G IG  G+     +GVKG RG  G  G+ G  G  GIPG+ G  G +GDMG
Sbjct: 157 GLPGPQGDPGIIGEPGDGGINSVGVKGIRGNPGIDGLEGFQGSYGIPGEMGYPGERGDMG 216

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------GIPGRN 214
           Y GP G+PG +G+ G +   G  G +G  G  G PG P  D             G  G  
Sbjct: 217 YRGPMGLPGMQGEVG-ETVYGAKGTVGEQGDRGEPGPPSKDEYKKTDTMYYPVKGSRGEK 275

Query: 215 GMDGIPG---KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           GM G  G   + G PG  G  G  G  G KGM G +GN G  G  G  G P     K E 
Sbjct: 276 GMRGDKGGYGRKGEPGMKGPHGRPGFAGTKGMKGEQGNDGPRGKQGAIGPPGPSGEKGEK 335

Query: 272 CS 273
            +
Sbjct: 336 GA 337



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 81/170 (47%), Gaps = 34/170 (20%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIP------------------------GDEGKRGPKGDMG 167
            KG +G  G PG+ GP GP+G+P                        G++G RG +G  G
Sbjct: 53  CKGIKGTPGFPGITGPQGPEGLPGDIGPDGPPGPKGEKGAAGEYGGTGEKGYRGDEGIRG 112

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           +PG  GIPG+    GP+G MG  G  G +G DG  G PGL   PG +G  G+PG  G PG
Sbjct: 113 FPGAPGIPGNP---GPEGVMGPDGLDGCNGTDGRAGAPGL---PGMHGERGLPGPQGDPG 166

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT---PAICAYKRESCSL 274
             G PG  G N   G+ G RGN G  G+ G  G+   P    Y  E   +
Sbjct: 167 IIGEPGDGGIN-SVGVKGIRGNPGIDGLEGFQGSYGIPGEMGYPGERGDM 215



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 12/95 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG++GP G+ G  G KG  G +G  G +G  G +GPPGP    G++G++G  G  G PGP
Sbjct: 290 PGMKGPHGRPGFAGTKGMKGEQGNDGPRGKQGAIGPPGPS---GEKGEKGAPGYAGKPGP 346

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            G+          G++G PG  G  G+ G  GEPG
Sbjct: 347 DGL---------DGELGEPGNQGPPGKQGAAGEPG 372



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 91/187 (48%), Gaps = 30/187 (16%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE-----KGAPGVVGPPGPQG 152
            ++GF  S   Y  PG  G  G++G++G +G MG+ G +GE      GA G VG  G +G
Sbjct: 192 GLEGFQGS---YGIPGEMGYPGERGDMGYRGPMGLPGMQGEVGETVYGAKGTVGEQGDRG 248

Query: 153 IPGDEGK-------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            PG   K             +G +G+ G  G +G  G +G+ G KG  G P   G  G  
Sbjct: 249 EPGPPSKDEYKKTDTMYYPVKGSRGEKGMRGDKGGYGRKGEPGMKGPHGRP---GFAGTK 305

Query: 200 GLPGEPGLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G+ GE G DG  G+ G  G P      G+ G PG  G PG +G +GE G  G +G  GK 
Sbjct: 306 GMKGEQGNDGPRGKQGAIGPPGPSGEKGEKGAPGYAGKPGPDGLDGELGEPGNQGPPGKQ 365

Query: 254 GINGVPG 260
           G  G PG
Sbjct: 366 GAAGEPG 372



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 93/214 (43%), Gaps = 70/214 (32%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QG  G +G+ GA G  G  GE+GEKGAPG  G PGP G+   +G+ G  G+ G PG Q
Sbjct: 309 GEQGNDGPRGKQGAIGPPGPSGEKGEKGAPGYAGKPGPDGL---DGELGEPGNQGPPGKQ 365

Query: 173 GIPGDEGKRGP------KGDMG------------------YPGRI--------------- 193
           G  G+ G+  P      +G++G                   PG++               
Sbjct: 366 GAAGEPGQYIPELDEIIQGNIGIQGDLGPPGNPGEPGIPGLPGKVGYIGPPGPPGPIGPP 425

Query: 194 -----------GLDGRDGLPGEPGLD---------------GIPGRNGMDGIPGKDGLPG 227
                      G  G+DGL GE GL                G PG + + G PG DG PG
Sbjct: 426 GSPGLKGSSIKGEPGQDGLTGEMGLQGPPGAPGIPGLAGPKGFPGIS-IHGPPGLDGKPG 484

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGK-SGINGVPG 260
             G+PG  G  G+ G  GP+G  GK S I G PG
Sbjct: 485 YPGVPGLPGDRGDHGPQGPKGFPGKGSRIGGPPG 518



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 80/173 (46%), Gaps = 26/173 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----VVGPPGPQ 151
           L   +GF   +  + PPGL G  G  G  G  G+ G  G +G KG PG    + GPPG +
Sbjct: 462 LAGPKGFPGISI-HGPPGLDGKPGYPGVPGLPGDRGDHGPQGPKGFPGKGSRIGGPPGER 520

Query: 152 ------------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                       G PG  G +G KG  G       PG  G++      G PG  GLDG  
Sbjct: 521 GLPGLPGLPGPDGFPGAPGFKGVKGLKGDDCGVCTPGLAGRK------GEPGDSGLDGYP 574

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
           G PG PGL G+    G  G+ GK G+ G  G+ G +G  G  G  GP+G  GK
Sbjct: 575 GTPGYPGLSGL---RGFKGVQGKRGIMGPRGLEGDSGRPGIAGPQGPKGEMGK 624



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 94/241 (39%), Gaps = 85/241 (35%)

Query: 113  GLQGPIGQKG--EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD----- 165
            GLQG  GQ+G    G +G  G+ G+ G  G  G VG  GP G PG +G +G KG+     
Sbjct: 887  GLQGAKGQRGYSTQGPRGFPGMAGQPGMPGRMGDVGITGPYGTPGFDGMKGLKGEIGFMG 946

Query: 166  ----------MGYPGP---------------------------------------QGIPG 176
                      MGY G                                        +G PG
Sbjct: 947  RRGDDGDAGPMGYSGRDGAPGQPGPPGPDGADGETGESGLSGRPGPDGMPGITGAKGQPG 1006

Query: 177  DEGKRGPKGDMGYPGR------IGLDGRDGLPGE---------------------PGLDG 209
            D G  G  G MG PG       IG DG DGLPGE                     PG  G
Sbjct: 1007 DVGPEGVIGIMGLPGPKGISGDIGPDGLDGLPGESAFSGPQGEVGEPGFMGELGPPGFPG 1066

Query: 210  IPGRNGMDGIP--GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            + GR+G  G P  G+DG PG  GI G  G +G  G+ GP+G  G  G +G+ G   I   
Sbjct: 1067 MDGRHGPPGEPGIGRDGSPGPKGIKGETGFDGFNGLPGPKGEVGDMGPDGLKGPRGIWGL 1126

Query: 268  K 268
            K
Sbjct: 1127 K 1127


>gi|332209567|ref|XP_003253886.1| PREDICTED: collagen alpha-1(III) chain [Nomascus leucogenys]
          Length = 1466

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 74/128 (57%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGEMG  G  G  G  G  GPPGP G  G  G RG  G+ G  G +G PG  G+RG  G 
Sbjct: 395 KGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGARGEPGPRGERGEAGI 454

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +GIPG  G  GE+G  GP
Sbjct: 455 PGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGP 514

Query: 247 RGNRGKSG 254
            G RG +G
Sbjct: 515 AGPRGAAG 522



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 66/127 (51%), Gaps = 18/127 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-------- 147
           L+  +G          PGL+G  G+ G+ GA+GE G +GERGE G PGV G         
Sbjct: 409 LMGARGPPGPAGANGAPGLRGGAGEPGKNGARGEPGPRGERGEAGIPGVPGAKGEDGKDG 468

Query: 148 ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
               PG  G+PG  G+RG  G  G  GP GIPG+   +GP G+ G PG  G     G  G
Sbjct: 469 SPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGE---KGPAGERGAPGPAGP---RGAAG 522

Query: 204 EPGLDGI 210
           EPG DG+
Sbjct: 523 EPGRDGV 529



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 85/214 (39%), Gaps = 63/214 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRAGEKGETGAPGLKGENGLPGENGAPGPMGPRGTPG 306

Query: 171 PQGIPGDEGKRGPKGDMGYPG------------------RIGLDGRDGLPGEPGLDGIPG 212
            +G PG  G  G +G+ G  G                    G  G  G  G PG +G PG
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG 366

Query: 213 RNGMD------------------------------GIPGKDGLPGKDGIPGTNGTNGEKG 242
           + G                                GIPG  GL G  G PG  G NG  G
Sbjct: 367 QRGEPGPQGQAGAQGPPGPPGSSGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPG 426

Query: 243 M---------------TGPRGNRGKSGINGVPGT 261
           +                GPRG RG++GI GVPG 
Sbjct: 427 LRGGAGEPGKNGARGEPGPRGERGEAGIPGVPGA 460



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 81/206 (39%), Gaps = 57/206 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------------------PGVVGPPGP 150
           PG  GP G  GE G  G  G  G RG  GA                     PG  G  GP
Sbjct: 296 PGPMGPRGTPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGP 355

Query: 151 QGIPGDEGKRG---------------------------PKGDMGYPGPQGIPGDEGKRGP 183
            G PG  G  G                            KG+MG  G  G PG  G RGP
Sbjct: 356 AGSPGSNGAPGQRGEPGPQGQAGAQGPPGPPGSSGSPGGKGEMGPAGIPGAPGLMGARGP 415

Query: 184 KGDMGYPGRIGLDGRDGLPG------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            G  G  G  GL G  G PG      EPG  G  G  G+ G+PG  G  GKDG PG  G 
Sbjct: 416 PGPAGANGAPGLRGGAGEPGKNGARGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGA 475

Query: 238 NGEKGMTGPRGN---RGKSGINGVPG 260
           NG  G  G RG    RG +G NG+PG
Sbjct: 476 NGLPGAAGERGAPGFRGPAGPNGIPG 501



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 55/100 (55%)

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK G  G  G PG +G+PG  G +GP G  G+PG  G  G DG  GE G  G PG  G +
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRAGEKGETGAPGLKGEN 287

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G+PG++G PG  G  GT G  G  G+ G  G RG  G  G
Sbjct: 288 GLPGENGAPGPMGPRGTPGERGRPGLPGAAGARGNDGARG 327



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 9/109 (8%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
           G+ GE G PG    PG +G+PG  G +GP G  G+PG +G  G +G+ G KG+ G P   
Sbjct: 228 GKDGESGRPGR---PGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRAGEKGETGAP--- 281

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           GL G +GLPGE   +G PG  G  G PG+ G PG  G  G  G +G +G
Sbjct: 282 GLKGENGLPGE---NGAPGPMGPRGTPGERGRPGLPGAAGARGNDGARG 327



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 65/142 (45%), Gaps = 21/142 (14%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRAGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  G+ G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 288 GLPGENGAPGPMGPRGTPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347

Query: 221 GKDGLPGKDGIPGTNGTNGEKG 242
           G  G  G  G PG+NG  G++G
Sbjct: 348 GAKGEVGPAGSPGSNGAPGQRG 369



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 67/170 (39%), Gaps = 57/170 (33%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPGPQG---- 173
            +G  G  G  G  G  G  G+PG  GPPGP G    PG  G  GPKGD G PG +G    
Sbjct: 878  RGLPGPPGSNGNPGPPGASGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGA 937

Query: 174  -----------IPGDEGKRG------------------PKGDMGYPGRIGLDGR------ 198
                       I G  G RG                   KG+ G PG  GL G       
Sbjct: 938  QGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGP 997

Query: 199  ------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                   G  GEPG          DG PG DGLPG+DG PG  G  GE G
Sbjct: 998  QGLPGLAGTAGEPG---------RDGNPGSDGLPGRDGSPGGKGDRGENG 1038



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 30/51 (58%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG QGP G KGE G +G  G+KG RG  G PG  G PGP G  G  G  GP
Sbjct: 1085 PGPQGPRGDKGETGERGATGIKGHRGFPGNPGAPGSPGPAGQQGALGSPGP 1135



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G  GEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRAGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297


>gi|65736617|dbj|BAD98524.1| type I procollagen alpha 1 chain [Raja kenojei]
          Length = 1463

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 101/221 (45%), Gaps = 34/221 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G KG+ G  G  G  G  GE+G  G  G PG QG+PG  G+RG  G+ G+PGP
Sbjct: 438 PGAKGEAGAKGDSGIAGPQGAPGPSGEEGKRGSRGEPGVQGLPGSPGERGSAGNRGFPGP 497

Query: 172 Q------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +      GIPG+ G  GP G  G  G  G  G  GLPG  GL G PG  G DG PG  G 
Sbjct: 498 EGLVGAKGIPGERGSPGPAGPKGATGESGRTGEPGLPGTRGLTGSPGSPGADGKPGPSGP 557

Query: 226 PGKD------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G+D                  G PG  GT GE G TG RG  G +G+ G+PG       
Sbjct: 558 AGQDGRPGPAGAIGQRGQPGVMGFPGPKGTAGESGKTGERGIVGPAGLVGLPGKDGDIGA 617

Query: 268 KRESCSLLPNSETSQLLI--------PPTIVGS--EHIFSS 298
              +    P  E  +  I        PP  VG+  EH  S 
Sbjct: 618 PGATGPAGPAGERGEQGITGAPGFQGPPGQVGAAGEHGKSG 658



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 92/173 (53%), Gaps = 24/173 (13%)

Query: 112 PGLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG +GP G +G +GA       G+ G  G +GE GA G  G  GPQG PG  G+ G +G 
Sbjct: 411 PGPRGPSGPQGAVGATGPKGNNGDSGAPGAKGEAGAKGDSGIAGPQGAPGPSGEEGKRGS 470

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------PGLDGIPGRNGM 216
            G PG QG+PG  G+RG  G+ G+PG  GL G  G+PGE          G  G  GR G 
Sbjct: 471 RGEPGVQGLPGSPGERGSAGNRGFPGPEGLVGAKGIPGERGSPGPAGPKGATGESGRTGE 530

Query: 217 DGIPGKDGL------PGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPG 260
            G+PG  GL      PG DG PG +G  G+ G  GP    G RG+ G+ G PG
Sbjct: 531 PGLPGTRGLTGSPGSPGADGKPGPSGPAGQDGRPGPAGAIGQRGQPGVMGFPG 583



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 85/169 (50%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
               +G   +     P G  G  G  G  GAKG +G  G  G  G PG  GP GPQG  G
Sbjct: 365 ATGARGEAGNPGPAGPTGAPGSAGSDGAPGAKGGVGAPGISGAPGFPGPRGPSGPQGAVG 424

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G +G  GD G PG +G  G +G  G  G  G PG  G +G+ G  GEPG+ G+PG  G
Sbjct: 425 ATGPKGNNGDSGAPGAKGEAGAKGDSGIAGPQGAPGPSGEEGKRGSRGEPGVQGLPGSPG 484

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  G PG +G+ G  G  GE+G  GP G +G +G +G  G P +
Sbjct: 485 ERGSAGNRGFPGPEGLVGAKGIPGERGSPGPAGPKGATGESGRTGEPGL 533



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 97/193 (50%), Gaps = 30/193 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQG 152
           LV  +G      E   PG  GP G  GE G  GE G+ G RG     G+PG  G PGP G
Sbjct: 500 LVGAKGI---PGERGSPGPAGPKGATGESGRTGEPGLPGTRGLTGSPGSPGADGKPGPSG 556

Query: 153 IPGDEGKRGPKGD---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             G +G+ GP G          MG+PGP+G  G+ GK G +G +G  G +GL G+DG  G
Sbjct: 557 PAGQDGRPGPAGAIGQRGQPGVMGFPGPKGTAGESGKTGERGIVGPAGLVGLPGKDGDIG 616

Query: 204 EPGLDGIP------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRG 248
            PG  G        G  G+ G PG  G PG+ G  G +G +GE+G+         TGPRG
Sbjct: 617 APGATGPAGPAGERGEQGITGAPGFQGPPGQVGAAGEHGKSGEQGIPGAVGPPGSTGPRG 676

Query: 249 NRGKSGINGVPGT 261
            RG +G  G PG 
Sbjct: 677 ERGFTGERGSPGA 689



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 75/153 (49%), Gaps = 3/153 (1%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G++G  G  G RGE G PG  GP G  G  G +G  G KG +G PG  G PG  
Sbjct: 352 GEAGPAGSRGADGATGARGEAGNPGPAGPTGAPGSAGSDGAPGAKGGVGAPGISGAPGFP 411

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G RGP G  G  G  G  G +G  G PG  G  G  G  GI G  G PG  G  G  G+ 
Sbjct: 412 GPRGPSGPQGAVGATGPKGNNGDSGAPGAKGEAGAKGDSGIAGPQGAPGPSGEEGKRGSR 471

Query: 239 GE---KGMTGPRGNRGKSGINGVPGTPAICAYK 268
           GE   +G+ G  G RG +G  G PG   +   K
Sbjct: 472 GEPGVQGLPGSPGERGSAGNRGFPGPEGLVGAK 504



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 80/150 (53%), Gaps = 9/150 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP GQ G  G  G +G +G+      PGV+G PGP+G  G+ GK G +G +G  G 
Sbjct: 552 PGPSGPAGQDGRPGPAGAIGQRGQ------PGVMGFPGPKGTAGESGKTGERGIVGPAGL 605

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGK 228
            G+PG +G  G  G  G  G  G  G  G+ G PG  G PG+ G  G  GK    G+PG 
Sbjct: 606 VGLPGKDGDIGAPGATGPAGPAGERGEQGITGAPGFQGPPGQVGAAGEHGKSGEQGIPGA 665

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G PG+ G  GE+G TG RG+ G  G  G 
Sbjct: 666 VGPPGSTGPRGERGFTGERGSPGAMGPTGA 695



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 82/178 (46%), Gaps = 18/178 (10%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  +  P G +G  G  GE GA G MG +G  GE+G PG  GP G +G  G  
Sbjct: 268 GVNGLDGAKGDSGPAGPKGETGSPGENGAPGAMGPRGIAGERGRPGATGPAGVRGNDGAS 327

Query: 158 GKRGPKGDM---------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G  GP G +               G  GP G  G +G  G +G+ G PG  G     G P
Sbjct: 328 GAAGPPGAVGPSGPPGFPGAPGAKGEAGPAGSRGADGATGARGEAGNPGPAGP---TGAP 384

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G DG PG  G  G PG  G PG  G  G +G  G  G TGP+GN G SG  G  G
Sbjct: 385 GSAGSDGAPGAKGGVGAPGISGAPGFPGPRGPSGPQGAVGATGPKGNNGDSGAPGAKG 442



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 81/179 (45%), Gaps = 42/179 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G IG  G  G  G  G +GE+G  GAPG  GPPG  G  G+ GK G +G  G  GP
Sbjct: 609 PGKDGDIGAPGATGPAGPAGERGEQGITGAPGFQGPPGQVGAAGEHGKSGEQGIPGAVGP 668

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGR------------------------------DGL 201
            G  G  G+RG  G+ G PG +G  G                                G+
Sbjct: 669 PGSTGPRGERGFTGERGSPGAMGPTGARGSPGSSGSEGAKGDAGPPGAPGGQGAPGLQGM 728

Query: 202 PGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PGE G  G+PG  G     G+ G DG PGKDG+         +GMTGP G  G +G+ G
Sbjct: 729 PGERGASGLPGPKGARGESGVKGADGAPGKDGM---------RGMTGPIGPPGHAGVVG 778



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 85/203 (41%), Gaps = 42/203 (20%)

Query: 100 QGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPP-------- 148
           +G   S  E   PG  GP    G++G  GA G  GV   RG  GA G  GPP        
Sbjct: 285 KGETGSPGENGAPGAMGPRGIAGERGRPGATGPAGV---RGNDGASGAAGPPGAVGPSGP 341

Query: 149 -------------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                        GP G  G +G  G +G+ G PGP G  G  G  G  G  G  G +G 
Sbjct: 342 PGFPGAPGAKGEAGPAGSRGADGATGARGEAGNPGPAGPTGAPGSAGSDGAPGAKGGVGA 401

Query: 196 DGRDGLPGEP------------GLDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGE 240
            G  G PG P            G  G  G NG  G P   G+ G  G  GI G  G  G 
Sbjct: 402 PGISGAPGFPGPRGPSGPQGAVGATGPKGNNGDSGAPGAKGEAGAKGDSGIAGPQGAPGP 461

Query: 241 KGMTGPRGNRGKSGINGVPGTPA 263
            G  G RG+RG+ G+ G+PG+P 
Sbjct: 462 SGEEGKRGSRGEPGVQGLPGSPG 484



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 64/137 (46%), Gaps = 12/137 (8%)

Query: 134 GERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           GE G+ G PG  GPPGPQG    PG  G  G KG  G  G  G  GD G  GPKG+ G P
Sbjct: 232 GEHGKAGRPGDRGPPGPQGARGFPGTPGLPGIKGHRGVNGLDGAKGDSGPAGPKGETGSP 291

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---------NGTNGEK 241
           G  G  G  G  G  G  G PG  G  G+ G DG  G  G PG           G  G K
Sbjct: 292 GENGAPGAMGPRGIAGERGRPGATGPAGVRGNDGASGAAGPPGAVGPSGPPGFPGAPGAK 351

Query: 242 GMTGPRGNRGKSGINGV 258
           G  GP G+RG  G  G 
Sbjct: 352 GEAGPAGSRGADGATGA 368



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 83/190 (43%), Gaps = 36/190 (18%)

Query: 104 NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP- 162
            ST +   PG  GP G  G  GA G+ G KGE G+ GA G  GP GP G  G  G  GP 
Sbjct: 796 GSTGDRGEPGAPGPAGFAGPPGADGQPGAKGEAGDTGAKGEAGPAGPTGAVGIAGPPGPT 855

Query: 163 --------KGDMGYPGPQGIP---------------------------GDEGKRGPKGDM 187
                   +G  G PG  G P                           G +G RG  G +
Sbjct: 856 GATGAKGARGAAGSPGATGFPGGVGRVGPPGPSGNAGPTGLPGPPGKEGAKGIRGETGAV 915

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G PG  G+ G  G  GE G  G  G +G  G+PG  GL G  G+ G  G  GE+G  GP+
Sbjct: 916 GRPGEPGIAGPAGPAGEKGAPGSDGPSGAPGLPGPQGLSGTRGVLGLTGMRGERGNMGPQ 975

Query: 248 GNRGKSGING 257
           G  G++G  G
Sbjct: 976 GQTGEAGKQG 985



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 87/218 (39%), Gaps = 72/218 (33%)

Query: 112 PGLQGPIGQ---KGEIGAKGEMGV------------KGERG---EKGAPGVVGPPGP--- 150
           PG QGP GQ    GE G  GE G+            +GERG   E+G+PG +GP G    
Sbjct: 639 PGFQGPPGQVGAAGEHGKSGEQGIPGAVGPPGSTGPRGERGFTGERGSPGAMGPTGARGS 698

Query: 151 ---------------------------QGIPGDEGK------RGPKGDMGYPGPQGIPGD 177
                                      QG+PG+ G       +G +G+ G  G  G PG 
Sbjct: 699 PGSSGSEGAKGDAGPPGAPGGQGAPGLQGMPGERGASGLPGPKGARGESGVKGADGAPGK 758

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLP---------------GEPGLDGIPGRNGMDGIPGK 222
           +G RG  G +G PG  G+ G  G                 G+ G  G PG  G  G PG 
Sbjct: 759 DGMRGMTGPIGPPGHAGVVGEKGEAGPPGPSGPVGARGSTGDRGEPGAPGPAGFAGPPGA 818

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           DG PG  G  G  G  GE G  GP    G  GI G PG
Sbjct: 819 DGQPGAKGEAGDTGAKGEAGPAGP---TGAVGIAGPPG 853



 Score = 46.2 bits (108), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 76/188 (40%), Gaps = 41/188 (21%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G+   T                        G  G  G +GAPG  G PGPQG  G +G+ 
Sbjct: 165 GYSEKTSGG-----------------IPMPGPMGPMGPRGAPGPAGSPGPQGFQGRQGET 207

Query: 161 GPK------------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G                    GD G  G  G PGD G  GP+G  G+PG  GL G  G  
Sbjct: 208 GEAGAPGPMGPRGPAGPPGKNGDDGEHGKAGRPGDRGPPGPQGARGFPGTPGLPGIKGHR 267

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT------NGTNGEKGMTGPRGNRGKSGIN 256
           G  GLDG  G +G  G  G+ G PG++G PG        G  G  G TGP G RG  G +
Sbjct: 268 GVNGLDGAKGDSGPAGPKGETGSPGENGAPGAMGPRGIAGERGRPGATGPAGVRGNDGAS 327

Query: 257 GVPGTPAI 264
           G  G P  
Sbjct: 328 GAAGPPGA 335



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 72/143 (50%), Gaps = 18/143 (12%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG----- 179
            GAKG  G  G  G  G PG+ GP GP G  G  G  GP G  G PGPQG+ G  G     
Sbjct: 904  GAKGIRGETGAVGRPGEPGIAGPAGPAGEKGAPGSDGPSGAPGLPGPQGLSGTRGVLGLT 963

Query: 180  -KRGPKGDMGYPGRIGLDGRDG------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
              RG +G+MG  G+ G  G+ G        G PG  G PG  G  G  G++G PG +G P
Sbjct: 964  GMRGERGNMGPQGQTGEAGKQGPVGAPGERGPPGPMGPPGLAGPSGEAGREGSPGAEGAP 1023

Query: 233  GTNGTNGEKGMTGPRGNRGKSGI 255
            G +G  G K      G+RG++G 
Sbjct: 1024 GRDGAVGAK------GDRGEAGA 1040



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 78/171 (45%), Gaps = 36/171 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PGL GP G  G  G  G  G++GERG  G         PQG  G+ GK+GP         
Sbjct: 945  PGLPGPQGLSGTRGVLGLTGMRGERGNMG---------PQGQTGEAGKQGPVGAPGERGP 995

Query: 163  ---------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                            G  G PG +G PG +G  G KGD G  G  G  G  G PG PG 
Sbjct: 996  PGPMGPPGLAGPSGEAGREGSPGAEGAPGRDGAVGAKGDRGEAGATGASGAPGAPGAPGP 1055

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G  G+ G  G PG  G  G  G  G  G N   G+TGPRG+RG+SG NG 
Sbjct: 1056 VGPSGKTGDRGEPGAAGPAGPSGPMGPRGAN---GLTGPRGDRGESGENGA 1103


>gi|395816324|ref|XP_003781654.1| PREDICTED: collagen alpha-1(X) chain [Otolemur garnettii]
          Length = 678

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 90/165 (54%), Gaps = 16/165 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+ GP G+ G  G  G  G+KG+RG  G   APG  G  GP G PG+ G  GP G+MG 
Sbjct: 286 PGIAGPPGEPG-YGKPGLPGLKGQRGPAGFTGAPGAKGEQGPVGHPGEPGLTGPPGNMGP 344

Query: 169 PGPQGI------PGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGLDGIPGRNGM 216
            GP+GI      PG +G+ GP G  G PG        GLDG+ G PGEPGL G  G  G+
Sbjct: 345 QGPKGIQGNYGIPGAKGESGPIGPFGLPGAKGERGFPGLDGKPGFPGEPGLSGPKGNPGL 404

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G+ G  G+PG+ G  G KG+ G  G  G  G  G+PG 
Sbjct: 405 MGPKGDSGVRGPPGLPGSIGPEGAKGVPGKNGEVGPRGEPGIPGA 449



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 90/180 (50%), Gaps = 27/180 (15%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPG---PQG---------I 153
           Y  PGL G  GQ+G  G  G  G KGE+G     G PG+ GPPG   PQG         I
Sbjct: 297 YGKPGLPGLKGQRGPAGFTGAPGAKGEQGPVGHPGEPGLTGPPGNMGPQGPKGIQGNYGI 356

Query: 154 PGDEGKRGP---------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           PG +G+ GP         KG+ G+PG  G PG  G+ G  G  G PG +G  G  G+ G 
Sbjct: 357 PGAKGESGPIGPFGLPGAKGERGFPGLDGKPGFPGEPGLSGPKGNPGLMGPKGDSGVRGP 416

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PGL G  G  G  G+PGK+G  G  G PG  G    +G+ GP G  G  G  G PG P +
Sbjct: 417 PGLPGSIGPEGAKGVPGKNGEVGPRGEPGIPGA---RGLIGPPGTSGFPGAKGDPGNPGL 473



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDMGYPGPQ 172
           G KGE G  G  G+ G +GE+G PG+ G PG  G PG  G +G      PKGD G  GP 
Sbjct: 358 GAKGESGPIGPFGLPGAKGERGFPGLDGKPGFPGEPGLSGPKGNPGLMGPKGDSGVRGPP 417

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG     GP+G  G PG+ G  G  G PG PG  G+ G  G  G PG  G PG  G+P
Sbjct: 418 GLPGS---IGPEGAKGVPGKNGEVGPRGEPGIPGARGLIGPPGTSGFPGAKGDPGNPGLP 474

Query: 233 G 233
           G
Sbjct: 475 G 475



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 91/205 (44%), Gaps = 34/205 (16%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPG-----------------VVGPPG------------P 150
           +KGE G  GE G+KG++G  G  G                  +G PG             
Sbjct: 220 KKGETGFPGEPGIKGDQGFPGEKGRDGLPGPRGPPGERGPACIGKPGIEGPPGHPGIPGT 279

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           +G  G  G  GP G+ GY G  G+PG +G+RGP G  G PG  G  G  G PGEPGL G 
Sbjct: 280 KGFSGAPGIAGPPGEPGY-GKPGLPGLKGQRGPAGFTGAPGAKGEQGPVGHPGEPGLTGP 338

Query: 211 PGR---NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           PG     G  GI G  G+PG  G  G  G  G  G  G RG  G  G  G PG P +   
Sbjct: 339 PGNMGPQGPKGIQGNYGIPGAKGESGPIGPFGLPGAKGERGFPGLDGKPGFPGEPGLSGP 398

Query: 268 KRESCSLLPNSETSQLLIPPTIVGS 292
           K     + P  + S +  PP + GS
Sbjct: 399 KGNPGLMGPKGD-SGVRGPPGLPGS 422



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 91/220 (41%), Gaps = 66/220 (30%)

Query: 109 YCPPGLQGPIGQKGEIGAKGE-----------MGVKGERGEKGAPGVVGPPGPQGIPGDE 157
           Y P G  GP G +G  G  G             G  GE+G +GAPG  G PG +GIPG+ 
Sbjct: 122 YGPKGDIGPAGFQGPRGPPGPRGIPGPAGLSVTGKPGEQGPEGAPGPRGYPGEKGIPGNP 181

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRG-----------------PKGDMGYPGRIGLDGRDG 200
           G  G KGDMGY    G+PG  G+RG                  KG+ G+PG  G+ G  G
Sbjct: 182 GVSGRKGDMGY----GVPGHPGERGLPGRQGPMGPPGPIGVGKKGETGFPGEPGIKGDQG 237

Query: 201 LPGEPGLD-----------------GIPG------------RNGMDGIPGKDGLP----- 226
            PGE G D                 G PG              G  G PG  G P     
Sbjct: 238 FPGEKGRDGLPGPRGPPGERGPACIGKPGIEGPPGHPGIPGTKGFSGAPGIAGPPGEPGY 297

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           GK G+PG  G  G  G TG  G +G+ G  G PG P +  
Sbjct: 298 GKPGLPGLKGQRGPAGFTGAPGAKGEQGPVGHPGEPGLTG 337



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------DEGKRGPKGDM 166
           G  GPIG  G  GAKGE G  G  G+ G PG  G  GP+G PG      D G RGP G  
Sbjct: 361 GESGPIGPFGLPGAKGERGFPGLDGKPGFPGEPGLSGPKGNPGLMGPKGDSGVRGPPGLP 420

Query: 167 GYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           G  GP+   G+PG  G+ GP+G+ G PG  GL G  G  G PG  G PG  G+ G
Sbjct: 421 GSIGPEGAKGVPGKNGEVGPRGEPGIPGARGLIGPPGTSGFPGAKGDPGNPGLPG 475



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 86/220 (39%), Gaps = 61/220 (27%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------ 161
           E  P G  GP G  GE G  G  GV G +G+ G           G+PG  G+RG      
Sbjct: 159 EQGPEGAPGPRGYPGEKGIPGNPGVSGRKGDMG----------YGVPGHPGERGLPGRQG 208

Query: 162 -----------PKGDMGYPGPQGIPGDEGKRGPKGD-----------------MGYP--- 190
                       KG+ G+PG  GI GD+G  G KG                  +G P   
Sbjct: 209 PMGPPGPIGVGKKGETGFPGEPGIKGDQGFPGEKGRDGLPGPRGPPGERGPACIGKPGIE 268

Query: 191 ------------GRIGLDGRDGLPGEPGLD--GIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                       G  G  G  G PGEPG    G+PG  G  G  G  G PG  G  G  G
Sbjct: 269 GPPGHPGIPGTKGFSGAPGIAGPPGEPGYGKPGLPGLKGQRGPAGFTGAPGAKGEQGPVG 328

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
             GE G+TGP GN G  G  G+ G   I   K ES  + P
Sbjct: 329 HPGEPGLTGPPGNMGPQGPKGIQGNYGIPGAKGESGPIGP 368


>gi|12847742|dbj|BAB27690.1| unnamed protein product [Mus musculus]
 gi|26390399|dbj|BAC25891.1| unnamed protein product [Mus musculus]
 gi|116283874|gb|AAH38017.1| Col9a1 protein [Mus musculus]
          Length = 680

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 85/186 (45%), Positives = 103/186 (55%), Gaps = 24/186 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VKGERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G               + G++GEKG
Sbjct: 184 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGDQGPPGPQGLRGITGIVGDKGEKG 243

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMGYPGRIG 194
           A G  G PGPQGIPG   D+G+RGP G+ G  G +GI G  G     GPKGD G PG   
Sbjct: 244 ARGFDGEPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSPGPKGDTGLPG--- 300

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           +DGRDG+PG PG  G  G+ G  G  G  GLPG  GIPG  G  GEKG TG  G  G+ G
Sbjct: 301 VDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLG 360

Query: 255 INGVPG 260
            +G PG
Sbjct: 361 SSGKPG 366



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G+ G  G +G+ G  GE G +G+RG +G+ G+ G P            GPKGD G
Sbjct: 250 EPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSP------------GPKGDTG 297

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG +GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 298 LPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPG 357

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG  G  G PG P 
Sbjct: 358 QLGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPG 399



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 85/180 (47%), Gaps = 30/180 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR--------- 181
           G+ G RG KGA G +G PG QG  G+EG +G  G++G    QG PG +G R         
Sbjct: 183 GLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGD---QGPPGPQGLRGITGIVGDK 239

Query: 182 ---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLP 226
                    G  G  G PG  G  G+ G PGE G +G  G  G  GIPG        GLP
Sbjct: 240 GEKGARGFDGEPGPQGIPGAAGDQGQRGPPGETGPEGDRGIQGSRGIPGSPGPKGDTGLP 299

Query: 227 ---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
              G+DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  +     +  QL
Sbjct: 300 GVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQL 359



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 84/175 (48%), Gaps = 21/175 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E   PG  G +G +G  G  G  G KG  GEKG  G  G PG  G  G  
Sbjct: 306 GIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKP 365

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG------------------LDGRD 199
           G++GP G++G  GP+G+PG  G  GP+G  G PG++G                  + G  
Sbjct: 366 GQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDR 425

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRG 251
           G+ GEPG  G  G +G +G  G  G  G  G PG  G+    GE G+ GP G RG
Sbjct: 426 GVFGEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGIRG 480


>gi|332025245|gb|EGI65419.1| Collagen alpha-2(XI) chain [Acromyrmex echinatior]
          Length = 1700

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 86/143 (60%), Gaps = 6/143 (4%)

Query: 124  IGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            +G KGE G  GE G  G PG+    G PG +G+PG  GK GP+G  G  G  G+PG++G 
Sbjct: 1219 MGTKGEPGKDGEDGRIGDPGISGEAGLPGKEGLPGPPGKSGPEGPAGQQGNTGLPGEKGD 1278

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLPGKDGIPGTNGT 237
             G  G +G+ G +GL G  GLPG PG  G+P   G NG+ G+PG  G PG  G  G+ G 
Sbjct: 1279 IGLPGALGFEGPVGLQGPSGLPGLPGERGLPGAAGENGIVGMPGAAGAPGIIGPIGSKGQ 1338

Query: 238  NGEKGMTGPRGNRGKSGINGVPG 260
             G+KG  G +G RG+SG+ G+ G
Sbjct: 1339 KGDKGRRGIKGYRGESGLIGIKG 1361



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 99/215 (46%), Gaps = 54/215 (25%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            +  P G  GP+G  G  G+ G  G+ G+   +GE G PG +GP GP GIPG+ G RG KG
Sbjct: 1074 QRGPKGEVGPVGATGSAGSVGPSGLPGQPGVKGEVGDPGTIGPIGPLGIPGERGPRGSKG 1133

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLP------------------- 202
              G  GP G  G +G++G  G +G PG+ GL+G+    GLP                   
Sbjct: 1134 LKGTEGPTGPEGRQGEKGDDGMLGPPGKAGLEGKQGERGLPGIKGEEGKLGLLGLPGLRG 1193

Query: 203  -----------------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                                         GEPG DG  GR G  GI G+ GLPGK+G+PG
Sbjct: 1194 LIGPEGAKGDVGLPGLPGPPGEPGLMGTKGEPGKDGEDGRIGDPGISGEAGLPGKEGLPG 1253

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G +G +G  G +GN G  G  G  G P    ++
Sbjct: 1254 PPGKSGPEGPAGQQGNTGLPGEKGDIGLPGALGFE 1288



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 86/159 (54%), Gaps = 9/159 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G  G  G  G  G KGE+G  G  G VG PG +G+ GDEG+RG  G+ G  G 
Sbjct: 619 PGLSGADGSPGLPGNPGIPGTKGEQGPLGLQGPVGFPGVRGVKGDEGQRGLAGERGEKGD 678

Query: 172 QGIPGDEGKRGPKGD------MGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGK 222
           +G+ G +G  G KG+       G PG  GL+G    +GL GE G  G+ G  G  G+PG 
Sbjct: 679 RGLEGKKGDTGTKGEPGAIGPQGMPGLEGLEGPKGFEGLRGETGPAGLSGEKGKVGLPGY 738

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG  G  G  G  G +G +G +G RG SG+ G  GT
Sbjct: 739 AGYPGNPGDKGNKGQLGNQGASGDKGERGNSGLQGERGT 777



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 80/140 (57%), Gaps = 3/140 (2%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           +G +G+ G+ G  G  G+PG+ G PG  G  G++G  G +G +G+PG +G+ GDEG+RG 
Sbjct: 610 VGPQGKPGIPGLSGADGSPGLPGNPGIPGTKGEQGPLGLQGPVGFPGVRGVKGDEGQRGL 669

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G+ G  G  GL+G+    G+ G  G PG  G  G+PG +GL G  G  G  G  G  G+
Sbjct: 670 AGERGEKGDRGLEGKK---GDTGTKGEPGAIGPQGMPGLEGLEGPKGFEGLRGETGPAGL 726

Query: 244 TGPRGNRGKSGINGVPGTPA 263
           +G +G  G  G  G PG P 
Sbjct: 727 SGEKGKVGLPGYAGYPGNPG 746



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 106/236 (44%), Gaps = 63/236 (26%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKG---------------EIGAKGEMGVKGERGEKG 140
            L  + G      E  P G QGP G KG               + G KG+MG  G +GEKG
Sbjct: 930  LSGLPGLPGLKGEMGPIGAQGPPGNKGIQGEPGKDGSPGPEGKQGHKGDMGSIGLKGEKG 989

Query: 141  APGVVGP------PGPQGI---------------------PGDEGKRGPKGDMGYPGPQG 173
              G VGP      PG +G+                     PG++G +G +GD+G+PGPQG
Sbjct: 990  DSGPVGPVGRDGLPGQRGLSGPPGPVGFPGEDGDKGNVGPPGEKGFKGSQGDVGFPGPQG 1049

Query: 174  IPGDE------------------GKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPG 212
            I G                    G+RGPKG++G  G  G  G     GLPG+PG+ G  G
Sbjct: 1050 IQGPRGESGLVGPPGEKGPPGEIGQRGPKGEVGPVGATGSAGSVGPSGLPGQPGVKGEVG 1109

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G  G  G  G+PG+ G  G+ G  G +G TGP G +G+ G +G+ G P     +
Sbjct: 1110 DPGTIGPIGPLGIPGERGPRGSKGLKGTEGPTGPEGRQGEKGDDGMLGPPGKAGLE 1165



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/113 (47%), Positives = 64/113 (56%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            I L    GF        P GL G  G++G  GA GE G+ G  G  GAPG++GP G +G 
Sbjct: 1279 IGLPGALGFEGPVGLQGPSGLPGLPGERGLPGAAGENGIVGMPGAAGAPGIIGPIGSKGQ 1338

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             GD+G+RG KG  G  G  GI GD GKRG KGD G+PG  G  G  G PG+ G
Sbjct: 1339 KGDKGRRGIKGYRGESGLIGIKGDHGKRGEKGDRGFPGTQGFKGNPGHPGQVG 1391



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 105/231 (45%), Gaps = 55/231 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G +G  G IG  G +G+ GERG +G+ G+ G  GP G  G +G++G  G +G PG 
Sbjct: 1102 PGVKGEVGDPGTIGPIGPLGIPGERGPRGSKGLKGTEGPTGPEGRQGEKGDDGMLGPPGK 1161

Query: 172  QGIPGDEGKRG---------------------------PKGDM----------------- 187
             G+ G +G+RG                            KGD+                 
Sbjct: 1162 AGLEGKQGERGLPGIKGEEGKLGLLGLPGLRGLIGPEGAKGDVGLPGLPGPPGEPGLMGT 1221

Query: 188  -GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK----- 241
             G PG+ G DGR G PG  G  G+PG+ G+ G PGK G  G  G  G  G  GEK     
Sbjct: 1222 KGEPGKDGEDGRIGDPGISGEAGLPGKEGLPGPPGKSGPEGPAGQQGNTGLPGEKGDIGL 1281

Query: 242  ----GMTGPRGNRGKSGINGVPGTPAICAYKRESCSL-LPNSETSQLLIPP 287
                G  GP G +G SG+ G+PG   +     E+  + +P +  +  +I P
Sbjct: 1282 PGALGFEGPVGLQGPSGLPGLPGERGLPGAAGENGIVGMPGAAGAPGIIGP 1332



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/138 (43%), Positives = 75/138 (54%), Gaps = 6/138 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP+G +G +G  G  GVKG+ G++G  G  G  G +G+ G +G  G KG+ G  GPQ
Sbjct: 641 GEQGPLGLQGPVGFPGVRGVKGDEGQRGLAGERGEKGDRGLEGKKGDTGTKGEPGAIGPQ 700

Query: 173 GIPGDEGKRGPKG------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G+PG EG  GPKG      + G  G  G  G+ GLPG  G  G PG  G  G  G  G  
Sbjct: 701 GMPGLEGLEGPKGFEGLRGETGPAGLSGEKGKVGLPGYAGYPGNPGDKGNKGQLGNQGAS 760

Query: 227 GKDGIPGTNGTNGEKGMT 244
           G  G  G +G  GE+G T
Sbjct: 761 GDKGERGNSGLQGERGTT 778



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 92/214 (42%), Gaps = 57/214 (26%)

Query: 101 GFCNSTKEYCPPGLQGPIG------------------QKGEIGAKGEMGVKGERGEKGAP 142
           G   +  E  P GLQGP+G                  ++GE G +G  G KG+ G KG P
Sbjct: 635 GIPGTKGEQGPLGLQGPVGFPGVRGVKGDEGQRGLAGERGEKGDRGLEGKKGDTGTKGEP 694

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDM---------------------GYPGPQGIPGDEGKR 181
           G +   GPQG+PG EG  GPKG                       GY G  G PGD+G +
Sbjct: 695 GAI---GPQGMPGLEGLEGPKGFEGLRGETGPAGLSGEKGKVGLPGYAGYPGNPGDKGNK 751

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPG---------------LDGIPGRNGMDGIPGKDGLP 226
           G  G+ G  G  G  G  GL GE G                +G+PG  G  G PG  G  
Sbjct: 752 GQLGNQGASGDKGERGNSGLQGERGTTGPRGFRGTRGRRGAEGLPGPKGDTGQPGPAGPS 811

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G PG  G  G  G +GP G  GK G+ G PG
Sbjct: 812 GEIGPPGVEGPRGFAGPSGPPGLDGKDGVPGPPG 845



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/132 (43%), Positives = 73/132 (55%), Gaps = 12/132 (9%)

Query: 111  PPGLQGPIGQKGEIGAK---------GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            P G+QGP G+ G +G           G+ G KGE G  GA G  G  GP G+PG  G +G
Sbjct: 1047 PQGIQGPRGESGLVGPPGEKGPPGEIGQRGPKGEVGPVGATGSAGSVGPSGLPGQPGVKG 1106

Query: 162  PKGD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
              GD   +G  GP GIPG+ G RG KG  G  G  G +GR G  G+ G+ G PG+ G++G
Sbjct: 1107 EVGDPGTIGPIGPLGIPGERGPRGSKGLKGTEGPTGPEGRQGEKGDDGMLGPPGKAGLEG 1166

Query: 219  IPGKDGLPGKDG 230
              G+ GLPG  G
Sbjct: 1167 KQGERGLPGIKG 1178



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 86/192 (44%), Gaps = 48/192 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------------ 153
            PG  G +GQ GE GA G  G  GE G  G  G  GPPGP G+                  
Sbjct: 868  PGPPGELGQPGEPGASGSPGAPGEIGLPGEQGKEGPPGPSGLTGLKGSPGPGGLPGFPGE 927

Query: 154  ---------PGDEGKRGPKGDMGYPGPQGI---------PGDEGKRGPKGDMGYPGRIGL 195
                     PG +G+ GP G  G PG +GI         PG EGK+G KGDMG  G  G 
Sbjct: 928  RGLSGLPGLPGLKGEMGPIGAQGPPGNKGIQGEPGKDGSPGPEGKQGHKGDMGSIGLKGE 987

Query: 196  DGRDGLPGEPGLDGIPGRNGM------------DGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G  G  G  G DG+PG+ G+            DG  G  G PG+ G  G+ G  G  G 
Sbjct: 988  KGDSGPVGPVGRDGLPGQRGLSGPPGPVGFPGEDGDKGNVGPPGEKGFKGSQGDVGFPGP 1047

Query: 244  TGPRGNRGKSGI 255
             G +G RG+SG+
Sbjct: 1048 QGIQGPRGESGL 1059



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 88/201 (43%), Gaps = 36/201 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGD--- 165
           PG +G  GQ G  G  GE+G  G  G +G  G  GPPG     G+PG  G+RGP G+   
Sbjct: 796 PGPKGDTGQPGPAGPSGEIGPPGVEGPRGFAGPSGPPGLDGKDGVPGPPGERGPTGESGS 855

Query: 166 ---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG---- 212
                    +G PGP G  G  G+ G  G  G PG IGL G  G  G PG  G+ G    
Sbjct: 856 PGPPGIPGVIGLPGPPGELGQPGEPGASGSPGAPGEIGLPGEQGKEGPPGPSGLTGLKGS 915

Query: 213 -----------RNGMDGIPGKDGLPGK------DGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                        G+ G+PG  GL G+       G PG  G  GE G  G  G  GK G 
Sbjct: 916 PGPGGLPGFPGERGLSGLPGLPGLKGEMGPIGAQGPPGNKGIQGEPGKDGSPGPEGKQGH 975

Query: 256 NGVPGTPAICAYKRESCSLLP 276
            G  G+  +   K +S  + P
Sbjct: 976 KGDMGSIGLKGEKGDSGPVGP 996



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 93/219 (42%), Gaps = 57/219 (26%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------- 157
           PPG++G   ++G+IG  G  G KGERG  G PG  G PG +G+ G++             
Sbjct: 489 PPGMKG---EQGQIGLPGLPGDKGERGSSGKPGESGLPGHEGMQGEDGPPGLPGLPGELG 545

Query: 158 --GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---------------------------- 187
             G  G +G  G PG  GIPG+EG  G KG++                            
Sbjct: 546 PRGFIGSRGFPGLPGNPGIPGNEGPPGIKGNVGPLGPPGAPGQSGPTGSIGSPGPQGPPG 605

Query: 188 --------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
                   G PG  GL G DG PG PG  GIPG  G     G  GL G  G PG  G  G
Sbjct: 606 PIGLVGPQGKPGIPGLSGADGSPGLPGNPGIPGTKGEQ---GPLGLQGPVGFPGVRGVKG 662

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
           ++G  G  G RG+ G  G+ G       K E  ++ P  
Sbjct: 663 DEGQRGLAGERGEKGDRGLEGKKGDTGTKGEPGAIGPQG 701



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 85/190 (44%), Gaps = 36/190 (18%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------- 147
           G    + E  PPG++GP   +G  G  G  G+ G+ G  G PG  GP             
Sbjct: 806 GPAGPSGEIGPPGVEGP---RGFAGPSGPPGLDGKDGVPGPPGERGPTGESGSPGPPGIP 862

Query: 148 -----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG----------- 191
                PGP G  G  G+ G  G  G PG  G+PG++GK GP G  G  G           
Sbjct: 863 GVIGLPGPPGELGQPGEPGASGSPGAPGEIGLPGEQGKEGPPGPSGLTGLKGSPGPGGLP 922

Query: 192 -RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPR 247
              G  G  GLPG PGL G  G  G  G PG  G+   PGKDG PG  G  G KG  G  
Sbjct: 923 GFPGERGLSGLPGLPGLKGEMGPIGAQGPPGNKGIQGEPGKDGSPGPEGKQGHKGDMGSI 982

Query: 248 GNRGKSGING 257
           G +G+ G +G
Sbjct: 983 GLKGEKGDSG 992



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 88/206 (42%), Gaps = 63/206 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------------QGIPGDEGKR 160
           GL+GP G +G  G  G  G+ GE+G+ G PG  G PG             QG  GD+G+R
Sbjct: 707 GLEGPKGFEGLRGETGPAGLSGEKGKVGLPGYAGYPGNPGDKGNKGQLGNQGASGDKGER 766

Query: 161 G------------------------------PKGDMGYPGPQGIPGD---EGKRGPKGDM 187
           G                              PKGD G PGP G  G+    G  GP+G  
Sbjct: 767 GNSGLQGERGTTGPRGFRGTRGRRGAEGLPGPKGDTGQPGPAGPSGEIGPPGVEGPRGFA 826

Query: 188 GYPGRIGLDGRDGLPGEPGLDG------------------IPGRNGMDGIPGKDGLPGKD 229
           G  G  GLDG+DG+PG PG  G                  +PG  G  G PG+ G  G  
Sbjct: 827 GPSGPPGLDGKDGVPGPPGERGPTGESGSPGPPGIPGVIGLPGPPGELGQPGEPGASGSP 886

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G PG  G  GE+G  GP G  G +G+
Sbjct: 887 GAPGEIGLPGEQGKEGPPGPSGLTGL 912



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 81/179 (45%), Gaps = 27/179 (15%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            G KGEMG  G +G  G  G+ G PG  G PG EGK+G KGDMG  G +G  GD G  GP 
Sbjct: 938  GLKGEMGPIGAQGPPGNKGIQGEPGKDGSPGPEGKQGHKGDMGSIGLKGEKGDSGPVGPV 997

Query: 185  GDMGYPGRIGL------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  G PG+ GL            DG  G  G PG  G  G  G  G PG  G+ G  G  
Sbjct: 998  GRDGLPGQRGLSGPPGPVGFPGEDGDKGNVGPPGEKGFKGSQGDVGFPGPQGIQGPRGES 1057

Query: 233  G------------TNGTNGEKGMTGPRGNRGKSGI---NGVPGTPAICAYKRESCSLLP 276
            G              G  G KG  GP G  G +G    +G+PG P +     +  ++ P
Sbjct: 1058 GLVGPPGEKGPPGEIGQRGPKGEVGPVGATGSAGSVGPSGLPGQPGVKGEVGDPGTIGP 1116



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 93/200 (46%), Gaps = 42/200 (21%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKG------------EIGAKGEMGVKGERGEKGAPGV 144
            + ++G    +    P G  G  GQ+G            E G KG +G  GE+G KG+ G 
Sbjct: 982  IGLKGEKGDSGPVGPVGRDGLPGQRGLSGPPGPVGFPGEDGDKGNVGPPGEKGFKGSQGD 1041

Query: 145  VGPPGPQGIPGDEG------------------KRGPKGDM---------GYPGPQGIPGD 177
            VG PGPQGI G  G                  +RGPKG++         G  GP G+PG 
Sbjct: 1042 VGFPGPQGIQGPRGESGLVGPPGEKGPPGEIGQRGPKGEVGPVGATGSAGSVGPSGLPGQ 1101

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
             G    KG++G PG IG  G  G+PGE G  G  G  G +G  G +G  G+ G  G  G 
Sbjct: 1102 PGV---KGEVGDPGTIGPIGPLGIPGERGPRGSKGLKGTEGPTGPEGRQGEKGDDGMLGP 1158

Query: 238  NGEKGMTGPRGNRGKSGING 257
             G+ G+ G +G RG  GI G
Sbjct: 1159 PGKAGLEGKQGERGLPGIKG 1178



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 81/174 (46%), Gaps = 18/174 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IPGD 156
            PG  G  G+ G+ G  GE G+ G+ G  G PG  GP GP G               +PG 
Sbjct: 1225 PGKDGEDGRIGDPGISGEAGLPGKEGLPGPPGKSGPEGPAGQQGNTGLPGEKGDIGLPGA 1284

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G  GP   +G  GP G+PG  G+RG  G  G  G +G+ G  G PG  G  G  G+ G 
Sbjct: 1285 LGFEGP---VGLQGPSGLPGLPGERGLPGAAGENGIVGMPGAAGAPGIIGPIGSKGQKGD 1341

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G  G  G  G+ G+ G  G +G++G  G RG  G  G  G PG P     + E
Sbjct: 1342 KGRRGIKGYRGESGLIGIKGDHGKRGEKGDRGFPGTQGFKGNPGHPGQVGPRGE 1395



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 75/150 (50%), Gaps = 15/150 (10%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKG 164
            PPG  GP   +G  G +G  G+ GE+G+ G PG       VG  GP G+PG  G+RG  G
Sbjct: 1254 PPGKSGP---EGPAGQQGNTGLPGEKGDIGLPGALGFEGPVGLQGPSGLPGLPGERGLPG 1310

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPG 221
              G  G  G+PG  G  G  G +G  G+ G  GR G+    GE GL GI G +G  G  G
Sbjct: 1311 AAGENGIVGMPGAAGAPGIIGPIGSKGQKGDKGRRGIKGYRGESGLIGIKGDHGKRGEKG 1370

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              G PG  G     G  G  G  GPRG +G
Sbjct: 1371 DRGFPGTQGF---KGNPGHPGQVGPRGEQG 1397



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 86/210 (40%), Gaps = 54/210 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL+G  G KG  G +GE G  G  GEKG    VG PG  G PG+ G +G KG +G    
Sbjct: 703 PGLEGLEGPKGFEGLRGETGPAGLSGEKGK---VGLPGYAGYPGNPGDKGNKGQLGN--- 756

Query: 172 QGIPGDEGKRG------------------------------PKGDMGYPGRIGLDGRDGL 201
           QG  GD+G+RG                              PKGD G PG  G  G  G 
Sbjct: 757 QGASGDKGERGNSGLQGERGTTGPRGFRGTRGRRGAEGLPGPKGDTGQPGPAGPSGEIGP 816

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---------------GMTGP 246
           PG  G  G  G +G  G+ GKDG+PG    PG  G  GE                G  G 
Sbjct: 817 PGVEGPRGFAGPSGPPGLDGKDGVPGP---PGERGPTGESGSPGPPGIPGVIGLPGPPGE 873

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G  G+ G +G PG P       E     P
Sbjct: 874 LGQPGEPGASGSPGAPGEIGLPGEQGKEGP 903



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 81/171 (47%), Gaps = 33/171 (19%)

Query: 111  PPGLQGPIGQKGEI------------GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            PPG +GP G+ G              G  GE+G  GE G  G+PG    PG  G+PG++G
Sbjct: 843  PPGERGPTGESGSPGPPGIPGVIGLPGPPGELGQPGEPGASGSPGA---PGEIGLPGEQG 899

Query: 159  KRGPKGDMGYPGPQGIPG------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            K GP      PGP G+ G              G+RG  G  G PG  G  G  G  G PG
Sbjct: 900  KEGP------PGPSGLTGLKGSPGPGGLPGFPGERGLSGLPGLPGLKGEMGPIGAQGPPG 953

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GI G  G DG PG +G  G  G  G+ G  GEKG +GP G  G+ G+ G
Sbjct: 954  NKGIQGEPGKDGSPGPEGKQGHKGDMGSIGLKGEKGDSGPVGPVGRDGLPG 1004



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 69/128 (53%), Gaps = 9/128 (7%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGL---DGRDGLP 202
           GPQG PG  G  G  G  G PG  GIPG +G++GP   +G +G+PG  G+   +G+ GL 
Sbjct: 611 GPQGKPGIPGLSGADGSPGLPGNPGIPGTKGEQGPLGLQGPVGFPGVRGVKGDEGQRGLA 670

Query: 203 GEPGLD---GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           GE G     G+ G+ G  G  G+ G  G  G+PG  G  G KG  G RG  G +G++G  
Sbjct: 671 GERGEKGDRGLEGKKGDTGTKGEPGAIGPQGMPGLEGLEGPKGFEGLRGETGPAGLSGEK 730

Query: 260 GTPAICAY 267
           G   +  Y
Sbjct: 731 GKVGLPGY 738



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 110/302 (36%), Gaps = 88/302 (29%)

Query: 50  NSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEY 109
           + V   P   FV P L ++  E+  + Q          L       ++AM+G        
Sbjct: 381 SGVSGPPGNVFVIPSLNQQGNEKGPDSQAE-------MLRQMISQHMLAMRGIEGPMGLT 433

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------------VVGPPGPQ 151
             PG  GP G +G+ G  GE+G    RG++G+PG                  + GPPG +
Sbjct: 434 GVPGQDGPPGPQGQKGEPGEIGEPRLRGDQGSPGNPGREGRRGRPGRDGERGLNGPPGMK 493

Query: 152 G------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRD 199
           G      +PG  G +G +G  G PG  G+PG EG +G  G  G PG        G  G  
Sbjct: 494 GEQGQIGLPGLPGDKGERGSSGKPGESGLPGHEGMQGEDGPPGLPGLPGELGPRGFIGSR 553

Query: 200 GLPGEPGLDGIPGRN--------------------------------------------- 214
           G PG PG  GIPG                                               
Sbjct: 554 GFPGLPGNPGIPGNEGPPGIKGNVGPLGPPGAPGQSGPTGSIGSPGPQGPPGPIGLVGPQ 613

Query: 215 ------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                 G+ G  G  GLPG  GIPGT G  G  G+ GP G  G  G+ G  G   +   +
Sbjct: 614 GKPGIPGLSGADGSPGLPGNPGIPGTKGEQGPLGLQGPVGFPGVRGVKGDEGQRGLAGER 673

Query: 269 RE 270
            E
Sbjct: 674 GE 675



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 24/100 (24%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGPPG 149
            +V M G   +      PG+ GPIG KG+ G KG  G+KG RGE      KG  G  G  G
Sbjct: 1317 IVGMPGAAGA------PGIIGPIGSKGQKGDKGRRGIKGYRGESGLIGIKGDHGKRGEKG 1370

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
             +G PG +G +            G PG  G+ GP+G+ G+
Sbjct: 1371 DRGFPGTQGFK------------GNPGHPGQVGPRGEQGF 1398


>gi|340370927|ref|XP_003383997.1| PREDICTED: hypothetical protein LOC100636484 [Amphimedon
            queenslandica]
          Length = 3540

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 135/288 (46%), Gaps = 33/288 (11%)

Query: 5    GTQNRSRIPTLNCQAYTLDKPIISKHNVSNRFRRHVDKDKGDIFDN--SVPQTPHVEFVP 62
            GT+ R   P +       + PI  K  +  R +R V  +KGD   N  S      V    
Sbjct: 1552 GTRGRKGPPGMKG-IRGDEGPIGPKGFMGERGKRGVQGNKGDTGPNGDSFGLIATVYQNE 1610

Query: 63   PDLYEEIREREKEQQNSTHNNP-WVWLNAYSRI-----------------PLVAMQGFCN 104
              L ++   ++ +   +  N   ++++NA + +                  L    G   
Sbjct: 1611 SGLQQDGGHQQGDMAFNLENQSLYIYVNATTALRACSDFIPGPPGPPGERGLRGKPGVAG 1670

Query: 105  STKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
               +   PGL+G   PIG+ G++G KG  G KG +G+KG  G+ G  G +GI G+ G  G
Sbjct: 1671 EKGDPGLPGLKGDPGPIGRPGKMGIKGATGPKGMKGDKGVRGMKGNQGLKGIKGENGSTG 1730

Query: 162  PKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM-- 216
            P G  G+PG +G  G+ G    +G KGD+G PG  G +G  G  G+ G+ G PG  G   
Sbjct: 1731 PNGTAGFPGMKGEKGNSGSTGLKGEKGDIGPPGEKGNNGTKGDKGDQGMKGDPGPKGEIG 1790

Query: 217  -DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             +G PG DG+ G  G PG NG  GE+   G RG++G  G+ G PG P 
Sbjct: 1791 EEGDPGIDGINGTKGEPGMNGPKGER---GERGDKGYQGLRGKPGPPG 1835



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/149 (46%), Positives = 85/149 (57%), Gaps = 9/149 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+ G  GQKGE   KG+ G KG +G+ G PG +G  GP G+ G  G RG  G MG PGP
Sbjct: 2089 PGINGTKGQKGE---KGDEGYKGLKGKPGPPGEMGKTGPPGMNGTSGPRGLPGKMGPPGP 2145

Query: 172  QGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            +G+ G +      G++G KG+ G  G IG  GR G+PG  G  G PG  G  G  G  GL
Sbjct: 2146 KGMKGQKGSNGTIGEKGMKGETGMEGPIGHTGRKGIPGPQGESGDPGEKGNRGPKGNPGL 2205

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G+ G+ G  G+KG  G RG RGK G
Sbjct: 2206 KGMKGLDGSKGEEGKKGNQGLRGRRGKPG 2234



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 89/166 (53%), Gaps = 9/166 (5%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            GF     E    G  G  G+KG+IG  GE G  G +G+KG  G+ G PGP+G  G+EG  
Sbjct: 1736 GFPGMKGEKGNSGSTGLKGEKGDIGPPGEKGNNGTKGDKGDQGMKGDPGPKGEIGEEGDP 1795

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G  G  G  G  G+ G +G+RG +GD GY G  G  G  G  GE GL GI G  G+ G P
Sbjct: 1796 GIDGINGTKGEPGMNGPKGERGERGDKGYQGLRGKPGPPGNKGEIGLPGIDGETGLVGEP 1855

Query: 221  GKDGLPGKDGIPGTNGTN---------GEKGMTGPRGNRGKSGING 257
            GK G  G  GI G  G N         GEKGM GPRG +G+ G+ G
Sbjct: 1856 GKMGPAGPKGIKGEKGCNGTTGMKGSKGEKGMRGPRGPKGEEGLRG 1901



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 107/236 (45%), Gaps = 33/236 (13%)

Query: 63  PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEY---CP-------- 111
           PDL   I        NST +       +YS +P V+   F +        CP        
Sbjct: 171 PDLIHGI--------NSTKDISIFESASYSNMPKVSHLIFSSKASTAVIDCPRIKVKVGA 222

Query: 112 --PGLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
              G++GP GQ+G  G KG++G            ++G +G  G+PG  G  G +G  G  
Sbjct: 223 DKQGIRGPAGQRGPQGFKGDVGDSGVQGPSGNNDIRGRQGRPGSPGTSGDGGDKGEMGSL 282

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G +G KG+MG PG QG+ GD G+RG  G  G  G  G  G +G+ G PG  G  G  G  
Sbjct: 283 GDKGDKGEMGPPGIQGLIGDPGERGMNGTKGMKGENGTRGDNGMIGLPGDRGGKGHQGDK 342

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           GI G DG  G+ G PG  G  G  G  G  G  G  G+ G PG+      K E+ S
Sbjct: 343 GINGNDGTIGRRGKPGLVGMKGAIGFKGENGTEGMKGMKGEPGSRGPIGLKGETGS 398



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 97/183 (53%), Gaps = 18/183 (9%)

Query: 101  GFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            G      +  PPG +G     G KG+ G KG+ G KGE GE+G PG+ G  G +G PG  
Sbjct: 1751 GLKGEKGDIGPPGEKGNNGTKGDKGDQGMKGDPGPKGEIGEEGDPGIDGINGTKGEPGMN 1810

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------DGIP 211
            G +G +G+ G  G QG+ G  G  G KG++G P   G+DG  GL GEPG        GI 
Sbjct: 1811 GPKGERGERGDKGYQGLRGKPGPPGNKGEIGLP---GIDGETGLVGEPGKMGPAGPKGIK 1867

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------TGPRGNRGKSGINGVPGTPAIC 265
            G  G +G  G  G  G+ G+ G  G  GE+G+       GP G++G++G  G PG P + 
Sbjct: 1868 GEKGCNGTTGMKGSKGEKGMRGPRGPKGEEGLRGPEGKMGPEGDKGETGRQGKPGPPGMK 1927

Query: 266  AYK 268
             +K
Sbjct: 1928 GFK 1930



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 84/161 (52%), Gaps = 12/161 (7%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G      E   PG+ G  G  GE G  G  G KGE+G++G  G+ G PGP   PG+ GK 
Sbjct: 2066 GLKGEKGEIGDPGIDGINGTIGEPGINGTKGQKGEKGDEGYKGLKGKPGP---PGEMGKT 2122

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GP G  G  GP+G+PG  G  GPKG  G  G  G  G  G+ GE G++G  G  G  GIP
Sbjct: 2123 GPPGMNGTSGPRGLPGKMGPPGPKGMKGQKGSNGTIGEKGMKGETGMEGPIGHTGRKGIP 2182

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G          +G  GEKG  GP+GN G  G+ G+ G+
Sbjct: 2183 GPQG---------ESGDPGEKGNRGPKGNPGLKGMKGLDGS 2214



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 90/174 (51%), Gaps = 33/174 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE------RGEKGAPGV------------VGPPGPQGI 153
            PG+ GP G++GE G KG  G++G+      +GE G PG+            +GP GP+GI
Sbjct: 1807 PGMNGPKGERGERGDKGYQGLRGKPGPPGNKGEIGLPGIDGETGLVGEPGKMGPAGPKGI 1866

Query: 154  PGDE------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             G++      G +G KG+ G  GP+G  G+EG RGP+G MG  G  G  GR G PG PG+
Sbjct: 1867 KGEKGCNGTTGMKGSKGEKGMRGPRGPKGEEGLRGPEGKMGPEGDKGETGRQGKPGPPGM 1926

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G  G  G  GL G+ G PG           G +GN G  G+NG  G 
Sbjct: 1927 KGFKGIKGDKGEKGDQGLKGRTGKPGP---------IGMKGNIGPPGLNGTDGA 1971



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 90/170 (52%), Gaps = 15/170 (8%)

Query: 114  LQGPIGQKG------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------GDEGKRG 161
            LQG  GQKG      +IG+KG +G  G  G+ G PG +GP G  G P      G+ G +G
Sbjct: 1248 LQGLTGQKGLKGETGDIGSKGSLGAMGFTGKSGQPGKLGPSGKNGRPSPPPLFGNPGDKG 1307

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             KG +G PG +G  G  G++G  G +G  G IG  G DGLPG  G  G  G+NG+ G  G
Sbjct: 1308 EKGFIGSPGMKGDSGLTGEKGMTGTIGSTGSIGDPGNDGLPGTNGSTGPSGKNGLTGSVG 1367

Query: 222  KDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAICAYK 268
              G  G++G  G +G  G+    GM GP G +G  GING  G P     K
Sbjct: 1368 GTGDQGENGENGNDGLTGKSGIDGMKGPLGEKGSFGINGTDGIPGGIGDK 1417



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/154 (47%), Positives = 85/154 (55%), Gaps = 9/154 (5%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GP G KG+IG  GE G  G +GEKG  G+ G PG +G  G+ G  G  G  G  G  GI 
Sbjct: 2033 GPKGDKGDIGPPGEKGNNGTKGEKGDQGMKGNPGLKGEKGEIGDPGIDGINGTIGEPGIN 2092

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---IPGKDGLPGKDGIP 232
            G +G++G KGD GY G   L G+ G PGE G  G PG NG  G   +PGK G PG  G+ 
Sbjct: 2093 GTKGQKGEKGDEGYKG---LKGKPGPPGEMGKTGPPGMNGTSGPRGLPGKMGPPGPKGMK 2149

Query: 233  G---TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G   +NGT GEKGM G  G  G  G  G  G P 
Sbjct: 2150 GQKGSNGTIGEKGMKGETGMEGPIGHTGRKGIPG 2183



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/150 (43%), Positives = 86/150 (57%), Gaps = 3/150 (2%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G KGE+G+ G+ G KGE G  G  G++G PG +G+ G +G +G  G  G  G 
Sbjct: 267 PGTSGDGGDKGEMGSLGDKGDKGEMGPPGIQGLIGDPGERGMNGTKGMKGENGTRGDNGM 326

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G+PGD G +G +GD G  G  G  GR    G+PGL G+ G  G  G  G +G+ G  G 
Sbjct: 327 IGLPGDRGGKGHQGDKGINGNDGTIGRR---GKPGLVGMKGAIGFKGENGTEGMKGMKGE 383

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG+ G  G KG TG +G +G  GI G+ G+
Sbjct: 384 PGSRGPIGLKGETGSQGLKGIKGIKGLNGS 413



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/142 (45%), Positives = 82/142 (57%), Gaps = 6/142 (4%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G IG+ G  G KG++G+KG++GE+G  G  G PG  GI G +G +G KG  G  G  
Sbjct: 2521 GLSGRIGKPGRKGEKGDIGIKGKKGEQGLQGRTGKPGLPGIKGSKGIKGFKGSKGSKGNF 2580

Query: 173  GIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---IPGKDGLP 226
            G  G  GK GP   KG  G  G  G+ G  G  G PG+ G PG  GM G   + G  G+ 
Sbjct: 2581 GRTGRTGKIGPPGMKGMNGIKGANGVKGYAGSRGSPGMRGPPGPKGMKGETGLKGDQGMI 2640

Query: 227  GKDGIPGTNGTNGEKGMTGPRG 248
            G++G+ G NGTNG+ G+ G RG
Sbjct: 2641 GEEGLMGANGTNGDTGLPGARG 2662



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 96/217 (44%), Gaps = 68/217 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEGK---------- 159
            G +GP G  GE G KG+ G KG   E+GEKG PG  G PGP G  G+EG+          
Sbjct: 2381 GDRGPKGCNGEKGIKGDKGHKGDPGEKGEKGNPGPKGNPGPIGPKGNEGQKGEKGDQGLI 2440

Query: 160  ----------------RGPKGDMGYPGP-------------------------------- 171
                            RGPKGD G  G                                 
Sbjct: 2441 GPTGDPGPMGPPGNGTRGPKGDNGTKGEIGPKGNNGTKGEKGEKGKKGIKGLTGDKGCKG 2500

Query: 172  ----QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
                +GI GDEG++GPKG+ G  GRIG  GR G  G+ G+ G  G  G+ G  GK GLP 
Sbjct: 2501 NNGTRGIKGDEGEKGPKGNQGLSGRIGKPGRKGEKGDIGIKGKKGEQGLQGRTGKPGLP- 2559

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              GI G+ G  G KG  G +GN G++G  G  G P +
Sbjct: 2560 --GIKGSKGIKGFKGSKGSKGNFGRTGRTGKIGPPGM 2594



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 92/191 (48%), Gaps = 16/191 (8%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            +GF  S       GL G  G  G IG+ G +G  G  G  G  G  GP G  G+ G  G 
Sbjct: 1309 KGFIGSPGMKGDSGLTGEKGMTGTIGSTGSIGDPGNDGLPGTNGSTGPSGKNGLTGSVGG 1368

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGLDGI---PGR 213
             G +G+ G  G  G+ G  G  G KG +G  G  G++G DG+PG   + G++GI   PG 
Sbjct: 1369 TGDQGENGENGNDGLTGKSGIDGMKGPLGEKGSFGINGTDGIPGGIGDKGMNGITGDPGD 1428

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN----------GVPGTPA 263
            NG DG  G +G PG  G  G  G  GE GM G +G+ G  GIN          G+PG   
Sbjct: 1429 NGTDGESGDNGAPGDKGRTGKPGPVGEVGMVGSKGDHGCKGINATVIGPPGEQGIPGETG 1488

Query: 264  ICAYKRESCSL 274
            +   K  + ++
Sbjct: 1489 LSGLKGSNGTI 1499



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 89/171 (52%), Gaps = 15/171 (8%)

Query: 110  CPPGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGP------PGPQGIPGDEGKR 160
             PP L G  G KGE G  G  G+KG+ G   EKG  G +G       PG  G+PG  G  
Sbjct: 1295 SPPPLFGNPGDKGEKGFIGSPGMKGDSGLTGEKGMTGTIGSTGSIGDPGNDGLPGTNGST 1354

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GP G  G  G  G  GD+G+ G  G+ G  G+ G+DG  G  GE G  GI   NG DGIP
Sbjct: 1355 GPSGKNGLTGSVGGTGDQGENGENGNDGLTGKSGIDGMKGPLGEKGSFGI---NGTDGIP 1411

Query: 221  GKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G +GI   PG NGT+GE G  G  G++G++G  G  G   +   K
Sbjct: 1412 GGIGDKGMNGITGDPGDNGTDGESGDNGAPGDKGRTGKPGPVGEVGMVGSK 1462



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 94/188 (50%), Gaps = 21/188 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---- 168
           G++G IG KGE G +G  G+KGE G +G  G+ G  G QG+ G +G +G  G  G+    
Sbjct: 361 GMKGAIGFKGENGTEGMKGMKGEPGSRGPIGLKGETGSQGLKGIKGIKGLNGSTGFKGNK 420

Query: 169 --------------PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                          GP G  G +G+RGP   KGD G  G  G +G DGLPG  G +GI 
Sbjct: 421 GEKGEKGEKGVNGTKGPSGDMGIKGERGPIGLKGDKGTIGDSGNNGTDGLPGMNGTEGIS 480

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G NG  G PG+ G+ G+ G  G  G  G  G +G RG RG  G  G  G       K ++
Sbjct: 481 GENGTMGSPGQQGMLGEKGPEGGIGLPGVNGTSGVRGRRGLPGRVGNIGALGDKGEKGQN 540

Query: 272 CSLLPNSE 279
            S+  N E
Sbjct: 541 GSMGMNGE 548



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 80/152 (52%), Gaps = 9/152 (5%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G  G KG+ G KG +G +G  G +G PG +G  GD G +G KG+ G  G  G PG  
Sbjct: 2500 GNNGTRGIKGDEGEKGPKGNQGLSGRIGKPGRKGEKGDIGIKGKKGEQGLQGRTGKPGLP 2559

Query: 179  GKRGPKGDMGYPG---------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G +G KG  G+ G         R G  G+ G PG  G++GI G NG+ G  G  G PG  
Sbjct: 2560 GIKGSKGIKGFKGSKGSKGNFGRTGRTGKIGPPGMKGMNGIKGANGVKGYAGSRGSPGMR 2619

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG  G  GE G+ G +G  G+ G+ G  GT
Sbjct: 2620 GPPGPKGMKGETGLKGDQGMIGEEGLMGANGT 2651



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 84/162 (51%), Gaps = 9/162 (5%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEG 158
            E   PG+ G  G KGE G  G  G +GERG+KG  G+ G PGP G         I G+ G
Sbjct: 1791 EEGDPGIDGINGTKGEPGMNGPKGERGERGDKGYQGLRGKPGPPGNKGEIGLPGIDGETG 1850

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
              G  G MG  GP+GI G++G  G  G  G  G  G+ G  G  GE GL G  G+ G +G
Sbjct: 1851 LVGEPGKMGPAGPKGIKGEKGCNGTTGMKGSKGEKGMRGPRGPKGEEGLRGPEGKMGPEG 1910

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G+ G  GK G PG  G  G KG  G +G++G  G  G PG
Sbjct: 1911 DKGETGRQGKPGPPGMKGFKGIKGDKGEKGDQGLKGRTGKPG 1952



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 82/148 (55%), Gaps = 9/148 (6%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGDM 166
            GL+G  G  GE+G  G  G+ G  G +G PG +GPPGP+G+ G +G      ++G KG+ 
Sbjct: 2108 GLKGKPGPPGEMGKTGPPGMNGTSGPRGLPGKMGPPGPKGMKGQKGSNGTIGEKGMKGET 2167

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G  GP G  G +G  GP+G+ G PG  G  G  G PG  G+ G+ G  G +G  G  GL 
Sbjct: 2168 GMEGPIGHTGRKGIPGPQGESGDPGEKGNRGPKGNPGLKGMKGLDGSKGEEGKKGNQGLR 2227

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G+ G P   G  GEKG  GP G  G SG
Sbjct: 2228 GRRGKP---GPIGEKGNIGPPGLNGTSG 2252



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 100/218 (45%), Gaps = 33/218 (15%)

Query: 103 CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE----- 157
            N TK   P G  G  G++G IG KG+ G  G+ G  G  G+ G  G +GI G+      
Sbjct: 431 VNGTK--GPSGDMGIKGERGPIGLKGDKGTIGDSGNNGTDGLPGMNGTEGISGENGTMGS 488

Query: 158 -------GKRGPKGDMGYPGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR 198
                  G++GP+G +G PG  G  G  G+R            G KG+ G  G +G++G 
Sbjct: 489 PGQQGMLGEKGPEGGIGLPGVNGTSGVRGRRGLPGRVGNIGALGDKGEKGQNGSMGMNGE 548

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGK 252
            G  G+ GLDG  G NG  GI G  G  G  G       PG  G NG KGM G  G RG 
Sbjct: 549 PGNKGQRGLDGDRGNNGSKGIKGVKGEVGPPGSVGPIGDPGEKGMNGTKGMKGENGTRGD 608

Query: 253 SGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIV 290
            GI G+PG      Y+ +      N  T +   PP I+
Sbjct: 609 IGIIGLPGDRGGKGYQGDKGIKGQNGITGRYG-PPVII 645



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 89/180 (49%), Gaps = 12/180 (6%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             MQG  N TK     G+ G IG+ G IG KG  G+KG+ G++G  G  G  G +G  GD 
Sbjct: 865  GMQG-SNGTKGI--KGMTGDIGENGWIGTKGLKGLKGQIGDQGFKGFKGRIGDRGDLGDV 921

Query: 158  GKRGPKGDMGYPGPQGIPGDEG---------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  GP G  G  G  G PG +G         K G KG  G  G  G+ G  G+PGE G  
Sbjct: 922  GNIGPDGINGTKGNSGPPGADGSKGSVGFIGKTGDKGRNGTRGDKGMRGEKGIPGEKGDI 981

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G  GI G  G PG+ G  GT G+ G+ G  G  G +G+SG  G PG   +   K
Sbjct: 982  GNQGPRGFQGIVGARGSPGEQGEKGTVGSQGDNGTRGDEGMKGESGRAGKPGQKGVKGAK 1041



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/129 (45%), Positives = 71/129 (55%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG+ G  G +G  G  G  G KG +G+KG+ G +G  G +G  G EG  G  G  G PG
Sbjct: 2124 PPGMNGTSGPRGLPGKMGPPGPKGMKGQKGSNGTIGEKGMKGETGMEGPIGHTGRKGIPG 2183

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            PQG  GD G++G +G  G PG  G+ G DG  GE G  G  G  G  G PG  G  G  G
Sbjct: 2184 PQGESGDPGEKGNRGPKGNPGLKGMKGLDGSKGEEGKKGNQGLRGRRGKPGPIGEKGNIG 2243

Query: 231  IPGTNGTNG 239
             PG NGT+G
Sbjct: 2244 PPGLNGTSG 2252



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 91/197 (46%), Gaps = 29/197 (14%)

Query: 97  VAMQGFCNSTKEYCP------PGLQGPIGQKGEIGAKGEMG---------------VKGE 135
           + M+G   S     P      PGL G  G +GEIG KGE G               +KG+
Sbjct: 679 IGMKGDTGSRGPKGPLGKMGSPGLHGVKGLQGEIGDKGEKGNQGKKGFKGGVGSKGIKGD 738

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
            G KG  G +GP G +G  G  G+RG  G  G  G  G  GD G++G  G +G  G  GL
Sbjct: 739 EGMKGERGPIGPQGEEGSHGTRGRRGVPGQKGMKGSIGDTGDIGEKGVNGSLGEKGMTGL 798

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------ 249
           +G  G  G  G DG  G  G  G  G++G  G  G PG  G+ G KG  GP GN      
Sbjct: 799 NGSKGDMGPKGPDGSKGPEGCMGEKGRNGSNGTFGDPGCKGSKGIKGEIGPSGNDTIGLK 858

Query: 250 --RGKSGINGVPGTPAI 264
             RG SG+ G  GT  I
Sbjct: 859 GERGASGMQGSNGTKGI 875



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 85/175 (48%), Gaps = 27/175 (15%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  PPG+QG IG  GE G  G  G+KGE G +G  G++      G+PGD G +G +GD G
Sbjct: 290 EMGPPGIQGLIGDPGERGMNGTKGMKGENGTRGDNGMI------GLPGDRGGKGHQGDKG 343

Query: 168 YPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEP------GLDGIPGRNGMDG 218
             G  G  G  GK    G KG +G+ G  G +G  G+ GEP      GL G  G  G+ G
Sbjct: 344 INGNDGTIGRRGKPGLVGMKGAIGFKGENGTEGMKGMKGEPGSRGPIGLKGETGSQGLKG 403

Query: 219 IPGKDGLPGKDGI------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           I G  GL G  G              G NGT G  G  G +G RG  G+ G  GT
Sbjct: 404 IKGIKGLNGSTGFKGNKGEKGEKGEKGVNGTKGPSGDMGIKGERGPIGLKGDKGT 458



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 84/167 (50%), Gaps = 6/167 (3%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGP 150
            I    ++G      +    G +G IG +G++G  G +G   + G +G  G PG  G  G 
Sbjct: 888  IGTKGLKGLKGQIGDQGFKGFKGRIGDRGDLGDVGNIGPDGINGTKGNSGPPGADGSKGS 947

Query: 151  QGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             G     GD+G+ G +GD G  G +GIPG++G  G +G  G+ G +G  G  G  GE G 
Sbjct: 948  VGFIGKTGDKGRNGTRGDKGMRGEKGIPGEKGDIGNQGPRGFQGIVGARGSPGEQGEKGT 1007

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G NG  G  G  G  G+ G PG  G  G KG +G  G+RG +G
Sbjct: 1008 VGSQGDNGTRGDEGMKGESGRAGKPGQKGVKGAKGFSGQPGHRGDTG 1054



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 80/159 (50%), Gaps = 3/159 (1%)

Query: 103  CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
              ST E    G++G  G KG  G+KG+ G  G  G  G  G+ G  G  G  GD G  G 
Sbjct: 1071 VGSTGENGARGMKGVTGAKGLNGSKGDNGSTGMMGRHGKMGLQGVKGITGDDGDTGNIGE 1130

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G  G PG  G  G EG  G KG  G  G IG  G +G+ G+ G  G  G NG+ G  GK
Sbjct: 1131 TGFNGIPGRNGSKGMEGNTGSKGKKGSTGGIGSKGMNGIKGDTGNQGDRGLNGLTGPTGK 1190

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            +G PG  G+PG  G    KGM G +G +G  G  G PG+
Sbjct: 1191 NGQPGIQGLPGNKGF---KGMIGWKGEKGSKGDTGRPGS 1226



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 86/184 (46%), Gaps = 21/184 (11%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
              QG   +       G +G +G +G+ G +G+ G+KGE G  G PG  G  G +G  G  
Sbjct: 988  GFQGIVGARGSPGEQGEKGTVGSQGDNGTRGDEGMKGESGRAGKPGQKGVKGAKGFSGQP 1047

Query: 158  GKRGPKGDMGYP---------------------GPQGIPGDEGKRGPKGDMGYPGRIGLD 196
            G RG  G++G+                      G +G+ G +G  G KGD G  G +G  
Sbjct: 1048 GHRGDTGNVGHTGKKGLPGGPGQVGSTGENGARGMKGVTGAKGLNGSKGDNGSTGMMGRH 1107

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G+ GL G  G+ G  G  G  G  G +G+PG++G  G  G  G KG  G  G  G  G+N
Sbjct: 1108 GKMGLQGVKGITGDDGDTGNIGETGFNGIPGRNGSKGMEGNTGSKGKKGSTGGIGSKGMN 1167

Query: 257  GVPG 260
            G+ G
Sbjct: 1168 GIKG 1171



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 87/170 (51%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL   +G KG IG KGE G +G +G KG PG  GP G +G  G +G +G KG  G  G 
Sbjct: 357 PGL---VGMKGAIGFKGENGTEGMKGMKGEPGSRGPIGLKGETGSQGLKGIKGIKGLNGS 413

Query: 172 QGIPGD------------EGKRGPKGDMGYPGR---IGLDGRDGLPGEPG---LDGIPGR 213
            G  G+             G +GP GDMG  G    IGL G  G  G+ G    DG+PG 
Sbjct: 414 TGFKGNKGEKGEKGEKGVNGTKGPSGDMGIKGERGPIGLKGDKGTIGDSGNNGTDGLPGM 473

Query: 214 NGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           NG +GI G++G    PG+ G+ G  G  G  G+ G  G  G  G  G+PG
Sbjct: 474 NGTEGISGENGTMGSPGQQGMLGEKGPEGGIGLPGVNGTSGVRGRRGLPG 523



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 94/195 (48%), Gaps = 33/195 (16%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           LV M+G      E    G++G    KGE G++G +G+KGE G +G  G+ G  G  G  G
Sbjct: 359 LVGMKGAIGFKGENGTEGMKG---MKGEPGSRGPIGLKGETGSQGLKGIKGIKGLNGSTG 415

Query: 156 ---------------DEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDG 197
                            G +GP GDMG  G   P G+ GD+G  G  G+ G  G  G++G
Sbjct: 416 FKGNKGEKGEKGEKGVNGTKGPSGDMGIKGERGPIGLKGDKGTIGDSGNNGTDGLPGMNG 475

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------------TG 245
            +G+ GE G  G PG+ GM G  G +G  G  G+ GT+G  G +G+             G
Sbjct: 476 TEGISGENGTMGSPGQQGMLGEKGPEGGIGLPGVNGTSGVRGRRGLPGRVGNIGALGDKG 535

Query: 246 PRGNRGKSGINGVPG 260
            +G  G  G+NG PG
Sbjct: 536 EKGQNGSMGMNGEPG 550



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 84/168 (50%), Gaps = 15/168 (8%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E   PG +G IG +G  G +G +G +G  GE+G  G VG  G  G  GDEG +G  G  G
Sbjct: 971  EKGIPGEKGDIGNQGPRGFQGIVGARGSPGEQGEKGTVGSQGDNGTRGDEGMKGESGRAG 1030

Query: 168  YPGPQGIPGDE---GKRGPKGDMGYPG------------RIGLDGRDGLPGEPGLDGIPG 212
             PG +G+ G +   G+ G +GD G  G            ++G  G +G  G  G+ G  G
Sbjct: 1031 KPGQKGVKGAKGFSGQPGHRGDTGNVGHTGKKGLPGGPGQVGSTGENGARGMKGVTGAKG 1090

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             NG  G  G  G+ G+ G  G  G  G  G  G  GN G++G NG+PG
Sbjct: 1091 LNGSKGDNGSTGMMGRHGKMGLQGVKGITGDDGDTGNIGETGFNGIPG 1138



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 83/169 (49%), Gaps = 21/169 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGER---GEKGAPGVVGPPGPQGIPGDE---GKRGPKGDM 166
            G  G  G KG  G +G+ G++GE+   GEKG  G  GP G QGI G     G++G KG +
Sbjct: 949  GFIGKTGDKGRNGTRGDKGMRGEKGIPGEKGDIGNQGPRGFQGIVGARGSPGEQGEKGTV 1008

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG-------------- 212
            G  G  G  GDEG +G  G  G PG+ G+ G  G  G+PG  G  G              
Sbjct: 1009 GSQGDNGTRGDEGMKGESGRAGKPGQKGVKGAKGFSGQPGHRGDTGNVGHTGKKGLPGGP 1068

Query: 213  -RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             + G  G  G  G+ G  G  G NG+ G+ G TG  G  GK G+ GV G
Sbjct: 1069 GQVGSTGENGARGMKGVTGAKGLNGSKGDNGSTGMMGRHGKMGLQGVKG 1117



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 73/136 (53%), Gaps = 12/136 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KG++G KG+ G  G +G KG  G+ G PGP+G      ++G KGD   PGP 
Sbjct: 2312 GSTGPKGDKGDMGPKGDKGNNGTKGFKGDKGIKGDPGPKG------EKGVKGD---PGPI 2362

Query: 173  GIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G PG EG++G  GD G  G     G +G  G+ G+ G  G PG  G  G PG  G PG  
Sbjct: 2363 GNPGKEGQKGNVGDKGNKGDRGPKGCNGEKGIKGDKGHKGDPGEKGEKGNPGPKGNPGPI 2422

Query: 230  GIPGTNGTNGEKGMTG 245
            G  G  G  GEKG  G
Sbjct: 2423 GPKGNEGQKGEKGDQG 2438



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 90/183 (49%), Gaps = 10/183 (5%)

Query: 89  NAYSRIP-LVAMQGFCNSTKEYCPPGLQGPIGQK---GEIGAKGEMGVKGERGEKGAPGV 144
           N    +P +   +G          PG QG +G+K   G IG  G  G  G RG +G PG 
Sbjct: 465 NGTDGLPGMNGTEGISGENGTMGSPGQQGMLGEKGPEGGIGLPGVNGTSGVRGRRGLPGR 524

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
           VG  G  G  G++G+ G  G  G P   G +G+ GD G  G KG  G  G +G  G  G 
Sbjct: 525 VGNIGALGDKGEKGQNGSMGMNGEPGNKGQRGLDGDRGNNGSKGIKGVKGEVGPPGSVGP 584

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+PG  G+   NG  G+ G++G  G  GI G  G  G KG  G +G +G++GI G  G 
Sbjct: 585 IGDPGEKGM---NGTKGMKGENGTRGDIGIIGLPGDRGGKGYQGDKGIKGQNGITGRYGP 641

Query: 262 PAI 264
           P I
Sbjct: 642 PVI 644



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 94/189 (49%), Gaps = 20/189 (10%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE--MGVKGERGEKGAPGVVGPPGPQGIP 154
            +  +G   S   +  PG +G  G KGEIG  G   +G+KGERG  G  G  G  G +G+ 
Sbjct: 820  MGEKGRNGSNGTFGDPGCKGSKGIKGEIGPSGNDTIGLKGERGASGMQGSNGTKGIKGMT 879

Query: 155  GDEGK------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            GD G+      +G KG  G  G QG  G +G+ G +GD+G  G IG DG +G  G     
Sbjct: 880  GDIGENGWIGTKGLKGLKGQIGDQGFKGFKGRIGDRGDLGDVGNIGPDGINGTKGN---S 936

Query: 209  GIPGRNGMD---GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------RGKSGINGVP 259
            G PG +G     G  GK G  G++G  G  G  GEKG+ G +G+      RG  GI G  
Sbjct: 937  GPPGADGSKGSVGFIGKTGDKGRNGTRGDKGMRGEKGIPGEKGDIGNQGPRGFQGIVGAR 996

Query: 260  GTPAICAYK 268
            G+P     K
Sbjct: 997  GSPGEQGEK 1005



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 93/205 (45%), Gaps = 48/205 (23%)

Query: 108  EYCPPGLQGPIGQKG------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            +  PPG +G  GQKG      E G KGE G++G  G  G  G+ GP G  G PG++G RG
Sbjct: 2139 KMGPPGPKGMKGQKGSNGTIGEKGMKGETGMEGPIGHTGRKGIPGPQGESGDPGEKGNRG 2198

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---GRDGLPGEPGLDGIPG------ 212
            PKG+ G  G +G+ G +G+ G KG+ G  GR G     G  G  G PGL+G  G      
Sbjct: 2199 PKGNPGLKGMKGLDGSKGEEGKKGNQGLRGRRGKPGPIGEKGNIGPPGLNGTSGPIGRPG 2258

Query: 213  ---------------RNGMDGIPGKDG------------------LPGKDGIPGTNGTNG 239
                             GM G+ G +G                    G+ G  G+ G  G
Sbjct: 2259 KRGPEGPPGPPGMKGMEGMKGMKGMNGSCGDEGPPGPPGRKGLPGALGEKGNNGSTGPKG 2318

Query: 240  EKGMTGPRGNRGKSGINGVPGTPAI 264
            +KG  GP+G++G +G  G  G   I
Sbjct: 2319 DKGDMGPKGDKGNNGTKGFKGDKGI 2343



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 86/179 (48%), Gaps = 28/179 (15%)

Query: 104  NSTK-EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GK 159
            N TK    PPG  G  G  G IG  G+ G  G RG+KG  G       +GIPG++   G 
Sbjct: 930  NGTKGNSGPPGADGSKGSVGFIGKTGDKGRNGTRGDKGMRG------EKGIPGEKGDIGN 983

Query: 160  RGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +GP+G  G  G +G PG++G++   G +GD G  G  G+ G  G  G+PG  G+ G  G 
Sbjct: 984  QGPRGFQGIVGARGSPGEQGEKGTVGSQGDNGTRGDEGMKGESGRAGKPGQKGVKGAKGF 1043

Query: 217  DGIPGKDGLPG---------------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG  G  G               + G  G NG  G KG+TG +G  G  G NG  G
Sbjct: 1044 SGQPGHRGDTGNVGHTGKKGLPGGPGQVGSTGENGARGMKGVTGAKGLNGSKGDNGSTG 1102



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 95/203 (46%), Gaps = 26/203 (12%)

Query: 82   NNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA 141
            N     +  + ++ L  ++G      +    G  G  G  G  G+KG  G  G +G+KG+
Sbjct: 1098 NGSTGMMGRHGKMGLQGVKGITGDDGDTGNIGETGFNGIPGRNGSKGMEGNTGSKGKKGS 1157

Query: 142  PGVVGPPGPQGIPGDEGKR---------GPKGDMGYPGPQGIPGD---------EGKRGP 183
             G +G  G  GI GD G +         GP G  G PG QG+PG+         +G++G 
Sbjct: 1158 TGGIGSKGMNGIKGDTGNQGDRGLNGLTGPTGKNGQPGIQGLPGNKGFKGMIGWKGEKGS 1217

Query: 184  KGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            KGD G P   G  G  G DGL G  G  G+     + G+ G+ GL G+ G  G+ G+ G 
Sbjct: 1218 KGDTGRPGSRGEFGEKGSDGLIGPLGKRGL-----LQGLTGQKGLKGETGDIGSKGSLGA 1272

Query: 241  KGMTGPRGNRGKSGINGVPGTPA 263
             G TG  G  GK G +G  G P+
Sbjct: 1273 MGFTGKSGQPGKLGPSGKNGRPS 1295



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 81/153 (52%), Gaps = 14/153 (9%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDMGYP 169
           GP G++G  G +G  GV G++G KG+ G  G  G +G+ G  G++G       KGDMG  
Sbjct: 749 GPQGEEGSHGTRGRRGVPGQKGMKGSIGDTGDIGEKGVNGSLGEKGMTGLNGSKGDMGPK 808

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG--IPGKDGLPG 227
           GP      +G +GP+G MG  GR G +G  G PG  G  GI G  G  G    G  G  G
Sbjct: 809 GP------DGSKGPEGCMGEKGRNGSNGTFGDPGCKGSKGIKGEIGPSGNDTIGLKGERG 862

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G+NGT G KGMTG  G  G  G  G+ G
Sbjct: 863 ASGMQGSNGTKGIKGMTGDIGENGWIGTKGLKG 895



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 88/213 (41%), Gaps = 50/213 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++GP+G+KG  G  G  G+ G  G+KG  G+ G PG  G  G+ G  G  GD G  G  
Sbjct: 1391 GMKGPLGEKGSFGINGTDGIPGGIGDKGMNGITGDPGDNGTDGESGDNGAPGDKGRTGKP 1450

Query: 173  GIPGDEGKRGPKGDMGYPG----RIGLDGRDGLPGEPGLDGIPGRN-------------- 214
            G  G+ G  G KGD G  G     IG  G  G+PGE GL G+ G N              
Sbjct: 1451 GPVGEVGMVGSKGDHGCKGINATVIGPPGEQGIPGETGLSGLKGSNGTIGVIGPNGTEGD 1510

Query: 215  ----------------------GMDGIPGK----------DGLPGKDGIPGTNGTNGEKG 242
                                  GM G PGK           G  G+ G PG  G  G++G
Sbjct: 1511 FGDDGGNGGVGEEGIKGEQGDQGMKGAPGKLIRPPGPPGPLGTRGRKGPPGMKGIRGDEG 1570

Query: 243  MTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              GP+G  G+ G  GV G         +S  L+
Sbjct: 1571 PIGPKGFMGERGKRGVQGNKGDTGPNGDSFGLI 1603



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 81/169 (47%), Gaps = 13/169 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G +G  GE G KG+ G+ G+RG  G+ G+ G  G  G PG  G  G  G+ G  G +
Sbjct: 538 GQNGSMGMNGEPGNKGQRGLDGDRGNNGSKGIKGVKGEVGPPGSVGPIGDPGEKGMNGTK 597

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------- 219
           G+ G+ G RG  G +G PG  G  G  G  G  G +GI GR G   I             
Sbjct: 598 GMKGENGTRGDIGIIGLPGDRGGKGYQGDKGIKGQNGITGRYGPPVIIMSFKCVVKDYFS 657

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G+ G  G  G NGTNG  GM G  G+RG  G  G  G+P +   K
Sbjct: 658 QGLKGMKGAVGNKGENGTNGTIGMKGDTGSRGPKGPLGKMGSPGLHGVK 706



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 96/207 (46%), Gaps = 44/207 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEI---GAKGEMGVK------------GERGEKGAP 142
            M+G    T +    G+ G +G+KG     G+KG+MG K            GE+G  G+ 
Sbjct: 770 GMKGSIGDTGDIGEKGVNGSLGEKGMTGLNGSKGDMGPKGPDGSKGPEGCMGEKGRNGSN 829

Query: 143 GVVGPPGPQGIPGDEGKRGP--------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           G  G PG +G  G +G+ GP        KG+ G  G QG  G +G +G  GD+G  G IG
Sbjct: 830 GTFGDPGCKGSKGIKGEIGPSGNDTIGLKGERGASGMQGSNGTKGIKGMTGDIGENGWIG 889

Query: 195 LDGRDGLPGE---PGLDGIPGR---------------NGMDGIPGKDGLPGKDGIPGTN- 235
             G  GL G+    G  G  GR               +G++G  G  G PG DG  G+  
Sbjct: 890 TKGLKGLKGQIGDQGFKGFKGRIGDRGDLGDVGNIGPDGINGTKGNSGPPGADGSKGSVG 949

Query: 236 --GTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+KG  G RG++G  G  G+PG
Sbjct: 950 FIGKTGDKGRNGTRGDKGMRGEKGIPG 976



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 81/170 (47%), Gaps = 14/170 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G++G IG  G+IG   E GV G  GEKG  G+ G  G  G  G +G +GP+G MG  G  
Sbjct: 770 GMKGSIGDTGDIG---EKGVNGSLGEKGMTGLNGSKGDMGPKGPDGSKGPEGCMGEKGRN 826

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           G  G  G  G KG  G  G IG  G D  GL GE G  G+ G NG  GI G  G  G++G
Sbjct: 827 GSNGTFGDPGCKGSKGIKGEIGPSGNDTIGLKGERGASGMQGSNGTKGIKGMTGDIGENG 886

Query: 231 IPGTNGTNGEKG---------MTGPRGNRGKSGINGVPGTPAICAYKRES 271
             GT G  G KG           G  G+RG  G  G  G   I   K  S
Sbjct: 887 WIGTKGLKGLKGQIGDQGFKGFKGRIGDRGDLGDVGNIGPDGINGTKGNS 936



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 85/206 (41%), Gaps = 37/206 (17%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G      E  PPG  GPIG  GE G  G  G+KGE G +G  G++G PG +G  G +G 
Sbjct: 567 KGIKGVKGEVGPPGSVGPIGDPGEKGMNGTKGMKGENGTRGDIGIIGLPGDRGGKGYQGD 626

Query: 160 RGPKGDMGYPG-------------------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           +G KG  G  G                    QG+ G +G  G KG+ G  G IG+ G  G
Sbjct: 627 KGIKGQNGITGRYGPPVIIMSFKCVVKDYFSQGLKGMKGAVGNKGENGTNGTIGMKGDTG 686

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------------------IPGTNGTNGEKG 242
             G  G  G  G  G+ G+ G  G  G  G                  I G  G  GE+G
Sbjct: 687 SRGPKGPLGKMGSPGLHGVKGLQGEIGDKGEKGNQGKKGFKGGVGSKGIKGDEGMKGERG 746

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYK 268
             GP+G  G  G  G  G P     K
Sbjct: 747 PIGPQGEEGSHGTRGRRGVPGQKGMK 772



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 80/159 (50%), Gaps = 20/159 (12%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP------GVVGPPGPQGIPGDEGKR---G 161
            P G +G +G KG+ G  G  G KG++G KG P      GV G PGP G PG EG++   G
Sbjct: 2316 PKGDKGDMGPKGDKGNNGTKGFKGDKGIKGDPGPKGEKGVKGDPGPIGNPGKEGQKGNVG 2375

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             KG+ G  GP+G  G++G +G KG  G PG  G  G  G  G PG  G  G  G  G  G
Sbjct: 2376 DKGNKGDRGPKGCNGEKGIKGDKGHKGDPGEKGEKGNPGPKGNPGPIGPKGNEGQKGEKG 2435

Query: 222  KDGL-----------PGKDGIPGTNGTNGEKGMTGPRGN 249
              GL           P  +G  G  G NG KG  GP+GN
Sbjct: 2436 DQGLIGPTGDPGPMGPPGNGTRGPKGDNGTKGEIGPKGN 2474



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 88/179 (49%), Gaps = 23/179 (12%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
             + G    T +   PG+QG  G KG    IG KGE G KG+ G  G+ G  G  G  G+ 
Sbjct: 1180 GLNGLTGPTGKNGQPGIQGLPGNKGFKGMIGWKGEKGSKGDTGRPGSRGEFGEKGSDGLI 1239

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G  GKRG          QG+ G +G +G  GD+G  G +G  G  G  G+PG  G  G+N
Sbjct: 1240 GPLGKRGLL--------QGLTGQKGLKGETGDIGSKGSLGAMGFTGKSGQPGKLGPSGKN 1291

Query: 215  G------MDGIPGKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGK---SGINGVPGT 261
            G      + G PG  G  G  G PG  G +   GEKGMTG  G+ G     G +G+PGT
Sbjct: 1292 GRPSPPPLFGNPGDKGEKGFIGSPGMKGDSGLTGEKGMTGTIGSTGSIGDPGNDGLPGT 1350



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 99/192 (51%), Gaps = 26/192 (13%)

Query: 95  PLVAMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPP 148
           P V +  F    K+Y   GL+G    +G KGE G  G +G+KG+   RG KG  G +G P
Sbjct: 641 PPVIIMSFKCVVKDYFSQGLKGMKGAVGNKGENGTNGTIGMKGDTGSRGPKGPLGKMGSP 700

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQG---------IPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G  G+ G +G+ G KG+ G  G +G         I GDEG +G +G       IG  G +
Sbjct: 701 GLHGVKGLQGEIGDKGEKGNQGKKGFKGGVGSKGIKGDEGMKGERGP------IGPQGEE 754

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G  G  G  G+PG+ GM G  G  G  G+ G+   NG+ GEKGMTG  G++G  G  G  
Sbjct: 755 GSHGTRGRRGVPGQKGMKGSIGDTGDIGEKGV---NGSLGEKGMTGLNGSKGDMGPKGPD 811

Query: 260 GT--PAICAYKR 269
           G+  P  C  ++
Sbjct: 812 GSKGPEGCMGEK 823



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 83/180 (46%), Gaps = 7/180 (3%)

Query: 76   QQNSTHNNPWVWLNAYSRIP-LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG 134
            Q  ST  N    +   +    L   +G   ST      G  G  G KG  G  G+ G  G
Sbjct: 1070 QVGSTGENGARGMKGVTGAKGLNGSKGDNGSTGMMGRHGKMGLQGVKGITGDDGDTGNIG 1129

Query: 135  ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
            E G  G PG  G  G +G  G +GK+G  G +G  G  GI GD G +G   D G  G  G
Sbjct: 1130 ETGFNGIPGRNGSKGMEGNTGSKGKKGSTGGIGSKGMNGIKGDTGNQG---DRGLNGLTG 1186

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRG 251
              G++G PG  GL G  G  GM G  G+ G  G  G PG+ G  GEK   G+ GP G RG
Sbjct: 1187 PTGKNGQPGIQGLPGNKGFKGMIGWKGEKGSKGDTGRPGSRGEFGEKGSDGLIGPLGKRG 1246



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 72/146 (49%), Gaps = 6/146 (4%)

Query: 134  GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            G  GE GA G+ G  G +G+ G +G  G  G MG  G  G+ G +G  G  GD G  G  
Sbjct: 1072 GSTGENGARGMKGVTGAKGLNGSKGDNGSTGMMGRHGKMGLQGVKGITGDDGDTGNIGET 1131

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNR 250
            G +G  G  G  G++G  G  G  G  G  G  G +GI G  G  G++   G+TGP G  
Sbjct: 1132 GFNGIPGRNGSKGMEGNTGSKGKKGSTGGIGSKGMNGIKGDTGNQGDRGLNGLTGPTGKN 1191

Query: 251  GKSGINGVPGT---PAICAYKRESCS 273
            G+ GI G+PG      +  +K E  S
Sbjct: 1192 GQPGIQGLPGNKGFKGMIGWKGEKGS 1217



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 62/115 (53%), Gaps = 12/115 (10%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGI- 210
            G+ G  GPKGD G  GP   PG++G    +G KGD G  G  GL G  G  G+PG+DGI 
Sbjct: 2027 GNNGSVGPKGDKGDIGP---PGEKGNNGTKGEKGDQGMKGNPGLKGEKGEIGDPGIDGIN 2083

Query: 211  -----PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                 PG NG  G  G+ G  G  G+ G  G  GE G TGP G  G SG  G+PG
Sbjct: 2084 GTIGEPGINGTKGQKGEKGDEGYKGLKGKPGPPGEMGKTGPPGMNGTSGPRGLPG 2138



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 90/189 (47%), Gaps = 31/189 (16%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGD 156
            +G   +T      G  G IG KG  G KG+ G +G+RG  G  G  G    PG QG+PG+
Sbjct: 1143 KGMEGNTGSKGKKGSTGGIGSKGMNGIKGDTGNQGDRGLNGLTGPTGKNGQPGIQGLPGN 1202

Query: 157  EG---------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI-GLDGRDGLPGEPG 206
            +G         ++G KGD G PG +G  G++G  G  G +G  G + GL G+ GL GE G
Sbjct: 1203 KGFKGMIGWKGEKGSKGDTGRPGSRGEFGEKGSDGLIGPLGKRGLLQGLTGQKGLKGETG 1262

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---------------GEKGMTGPRGNRG 251
              G  G  G  G  GK G PGK    G +G N               GEKG  G  G +G
Sbjct: 1263 DIGSKGSLGAMGFTGKSGQPGK---LGPSGKNGRPSPPPLFGNPGDKGEKGFIGSPGMKG 1319

Query: 252  KSGINGVPG 260
             SG+ G  G
Sbjct: 1320 DSGLTGEKG 1328



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 87/212 (41%), Gaps = 51/212 (24%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEK---GAPGVVGPPGPQGIPG-------------- 155
            G++G  G KGE G KG  G++G RG+    G  G +GPPG  G  G              
Sbjct: 2207 GMKGLDGSKGEEGKKGNQGLRGRRGKPGPIGEKGNIGPPGLNGTSGPIGRPGKRGPEGPP 2266

Query: 156  -------DEGKRGPK------------------------GDMGYPGPQGIPGDEGKRGPK 184
                    EG +G K                        G+ G  G  G  GD+G  GPK
Sbjct: 2267 GPPGMKGMEGMKGMKGMNGSCGDEGPPGPPGRKGLPGALGEKGNNGSTGPKGDKGDMGPK 2326

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            GD G  G  G  G  G+ G+PG     G  G+ G PG  G PGK+G  G  G  G KG  
Sbjct: 2327 GDKGNNGTKGFKGDKGIKGDPGPK---GEKGVKGDPGPIGNPGKEGQKGNVGDKGNKGDR 2383

Query: 245  GPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            GP+G  G+ GI G  G       K E  +  P
Sbjct: 2384 GPKGCNGEKGIKGDKGHKGDPGEKGEKGNPGP 2415



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 87/213 (40%), Gaps = 48/213 (22%)

Query: 96   LVAMQGFCNSTKEYCPPGLQG---------PIGQKGEIGAKGEMGVKG------------ 134
            L  M+G   S  E    G QG         PIG+KG IG  G  G  G            
Sbjct: 2205 LKGMKGLDGSKGEEGKKGNQGLRGRRGKPGPIGEKGNIGPPGLNGTSGPIGRPGKRGPEG 2264

Query: 135  ---------ERGEKGAPGVVGPPGPQ---------------GIPGDEGKRGPKGDMGYPG 170
                       G KG  G+ G  G +               G  G+ G  GPKGD G  G
Sbjct: 2265 PPGPPGMKGMEGMKGMKGMNGSCGDEGPPGPPGRKGLPGALGEKGNNGSTGPKGDKGDMG 2324

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            P+G  G+ G +G KGD G  G  G  G  G+ G+PG  G PG+ G  G  G     G  G
Sbjct: 2325 PKGDKGNNGTKGFKGDKGIKGDPGPKGEKGVKGDPGPIGNPGKEGQKGNVGDK---GNKG 2381

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G  G NGEKG+ G +G++G  G  G  G P 
Sbjct: 2382 DRGPKGCNGEKGIKGDKGHKGDPGEKGEKGNPG 2414



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 61/119 (51%), Gaps = 12/119 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG---DMGY 168
            PGL G  G KG  G KG  G KG  G  G  G +GPPG +G+ G +G  G KG     G 
Sbjct: 2556 PGLPGIKGSKGIKGFKGSKGSKGNFGRTGRTGKIGPPGMKGMNGIKGANGVKGYAGSRGS 2615

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            PG +G P      GPK   G  G  GL G  G+ GE GL G  G NG  G+PG  G PG
Sbjct: 2616 PGMRGPP------GPK---GMKGETGLKGDQGMIGEEGLMGANGTNGDTGLPGARGPPG 2665



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 93/242 (38%), Gaps = 69/242 (28%)

Query: 92   SRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
              I L  + G      E    G  GP G KGE G  G  G+KG +GEKG  G  GP G +
Sbjct: 1838 GEIGLPGIDGETGLVGEPGKMGPAGPKGIKGEKGCNGTTGMKGSKGEKGMRGPRGPKGEE 1897

Query: 152  GIPGDEGKRGPKGD------MGYPGP------QGIPGDEGKR---------GPKGDMGYP 190
            G+ G EGK GP+GD       G PGP      +GI GD+G++         G  G +G  
Sbjct: 1898 GLRGPEGKMGPEGDKGETGRQGKPGPPGMKGFKGIKGDKGEKGDQGLKGRTGKPGPIGMK 1957

Query: 191  GRIGLDGRDGLPGE---------------------------------------------- 204
            G IG  G +G  G                                               
Sbjct: 1958 GNIGPPGLNGTDGAIGRPGKMGPPGPLGPSGIKGMKGMKGMKGMKGPRGDEGPPGPPGRK 2017

Query: 205  --PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
              PGL G  G NG  G  G  G  G  G  G NGT GEKG  G +GN G  G  G  G P
Sbjct: 2018 GLPGLFGEKGNNGSVGPKGDKGDIGPPGEKGNNGTKGEKGDQGMKGNPGLKGEKGEIGDP 2077

Query: 263  AI 264
             I
Sbjct: 2078 GI 2079



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 12/94 (12%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G    T +  PPG++G        G KG  GVKG  G +G+PG+ GPPGP+G+   +G+ 
Sbjct: 2581 GRTGRTGKIGPPGMKG------MNGIKGANGVKGYAGSRGSPGMRGPPGPKGM---KGET 2631

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
            G KGD G  G +G+    G  G  GD G PG  G
Sbjct: 2632 GLKGDQGMIGEEGL---MGANGTNGDTGLPGARG 2662



 Score = 43.1 bits (100), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 81/197 (41%), Gaps = 33/197 (16%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIG---QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
              M+G    T     PG QG  G   +KG  G KG  G+KG +G  G+ G  G  G QG+
Sbjct: 2167 TGMEGPIGHTGRKGIPGPQGESGDPGEKGNRGPKGNPGLKGMKGLDGSKGEEGKKGNQGL 2226

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------------GLDGRDGL 201
             G  GK GP G+ G  GP   PG  G  GP G  G  G              G+ G  G+
Sbjct: 2227 RGRRGKPGPIGEKGNIGP---PGLNGTSGPIGRPGKRGPEGPPGPPGMKGMEGMKGMKGM 2283

Query: 202  PGEPGLD---------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G  G +               G  G NG  G  G  G  G  G  G NGT G KG  G 
Sbjct: 2284 NGSCGDEGPPGPPGRKGLPGALGEKGNNGSTGPKGDKGDMGPKGDKGNNGTKGFKGDKGI 2343

Query: 247  RGNRGKSGINGVPGTPA 263
            +G+ G  G  GV G P 
Sbjct: 2344 KGDPGPKGEKGVKGDPG 2360


>gi|340376087|ref|XP_003386565.1| PREDICTED: collagen alpha-1(VII) chain-like [Amphimedon
           queenslandica]
          Length = 1258

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 89/162 (54%), Gaps = 12/162 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP GQ G+ G  G  G  G+ G +G  G +GP G QG PGD+G   PKGD G PG +
Sbjct: 754 GPMGPAGQDGDPGTPGSRGPPGKMGPRGPEGPLGPNGTQGEPGDDG---PKGDPGTPGAR 810

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG  G  G  G  G PG+ G+DG  G+PG     G PG+ G DGIPG  G PGK GIP
Sbjct: 811 GPPGKMGTNGVPGARGPPGKTGIDGEPGIPGS---RGPPGKMGSDGIPGARGPPGKSGIP 867

Query: 233 GTNGTNGEKGM------TGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G+ G+      +GP G  G+ G+ G+PG       K
Sbjct: 868 GARGPPGKSGLPGVPGRSGPPGKNGEPGMKGMPGVNGTTGRK 909



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/150 (47%), Positives = 83/150 (55%), Gaps = 18/150 (12%)

Query: 111 PPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           PPG  GP G +G +G    +GE G  G +G+ G PG  GPPG  G  G  G RGP G  G
Sbjct: 773 PPGKMGPRGPEGPLGPNGTQGEPGDDGPKGDPGTPGARGPPGKMGTNGVPGARGPPGKTG 832

Query: 168 YPGPQGIPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             G  GIPG    RGP G MG          PG+ G+ G  G PG+ GL G+PGR+G   
Sbjct: 833 IDGEPGIPG---SRGPPGKMGSDGIPGARGPPGKSGIPGARGPPGKSGLPGVPGRSG--- 886

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PGK+G PG  G+PG NGT G KG  GP G
Sbjct: 887 PPGKNGEPGMKGMPGVNGTTGRKGSPGPPG 916



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 93/171 (54%), Gaps = 11/171 (6%)

Query: 111 PPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           P G QGP+G KGE G +G  G   + G +GE+G  G  GP GP+G PG  G  GP+G+MG
Sbjct: 302 PEGPQGPVGPKGEKGMQGPAGPSGMNGTKGERGMIGPEGPEGPRGFPGFNGTDGPRGEMG 361

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP------- 220
             G  G+PG  G  G KGD G PG  G  G  G PG  G+DG PGR G  G P       
Sbjct: 362 ERGMPGVPGRNGTDGVKGDKGDPGNNGTMGPMGPPGMKGMDGPPGRAGKPGPPGLPGNGS 421

Query: 221 -GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+DG PG +G  G  G  GEKGM G  G+ G++G  G  G P     K E
Sbjct: 422 LGRDGKPGINGTDGMKGKPGEKGMKGEPGSDGRAGKPGPAGVPGFNGTKGE 472



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/166 (45%), Positives = 90/166 (54%), Gaps = 15/166 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK---GDMGYP 169
           G  G  G  G  G KG+ G KG +GE G+ G  G PGP G+PG  G +G K   G  G P
Sbjct: 423 GRDGKPGINGTDGMKGKPGEKGMKGEPGSDGRAGKPGPAGVPGFNGTKGEKGMSGQPGIP 482

Query: 170 GPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G  G  G+RGP      KGD G  G  G DGRDG+ G  G  G  G +G+ G PG +
Sbjct: 483 GLNGTAGARGERGPPGLNGTKGDKGDTGSPGNDGRDGINGTKGEKGSDGSDGLMGPPGSN 542

Query: 224 GLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G  G  G PG NG+    GEKGM GP G RG++   G PG+P +C 
Sbjct: 543 GTMGPMGPPGFNGSRGDPGEKGMIGPPGLRGQT---GKPGSPGVCG 585



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 96/206 (46%), Gaps = 40/206 (19%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPP- 148
           +  + G   +  E  PPGL G  G KG+ G+ G        G KGE+G  G+ G++GPP 
Sbjct: 481 IPGLNGTAGARGERGPPGLNGTKGDKGDTGSPGNDGRDGINGTKGEKGSDGSDGLMGPPG 540

Query: 149 -----GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG--------------- 188
                GP G PG  G RG  G+ G  GP G+ G  GK G  G  G               
Sbjct: 541 SNGTMGPMGPPGFNGSRGDPGEKGMIGPPGLRGQTGKPGSPGVCGCNGTEGGVQGPPGPP 600

Query: 189 ----------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTN 235
                      PG  G  GR G PG+PG  G  G +G  G PG  G+ G+ G+    G N
Sbjct: 601 GPRGGTGKPGEPGMKGDPGRKGTPGDPGAPGTNGTDGRAGKPGPAGMKGEKGMAGPAGMN 660

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGT 261
           GT GEKGMTGP G  G  G+ G+ G+
Sbjct: 661 GTRGEKGMTGPPGLNGTFGLPGMNGS 686



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 96/230 (41%), Gaps = 69/230 (30%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM---------GVKGERGEKGAPGV--- 144
             M G         PPGL G  G  G  G+ G           G  G+RGE+G PG    
Sbjct: 657 AGMNGTRGEKGMTGPPGLNGTFGLPGMNGSDGPPGPPGRDGFNGSTGQRGEEGPPGSRGV 716

Query: 145 ---------------------------------------VGPPGPQGIPGDEGKRGPKGD 165
                                                  +GP G  G PG  G RGP G 
Sbjct: 717 PGKMGLQGMKGMNGSKGEMGPMGPPGEPGPPGNNGTMGPMGPAGQDGDPGTPGSRGPPGK 776

Query: 166 MGYPGP---------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           MG  GP         QG PGD+   GPKGD G PG  G  G+ G  G PG  G PG+ G+
Sbjct: 777 MGPRGPEGPLGPNGTQGEPGDD---GPKGDPGTPGARGPPGKMGTNGVPGARGPPGKTGI 833

Query: 217 D---GIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           D   GIPG  G PGK   DGIPG  G  G+ G+ G RG  GKSG+ GVPG
Sbjct: 834 DGEPGIPGSRGPPGKMGSDGIPGARGPPGKSGIPGARGPPGKSGLPGVPG 883



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 73/149 (48%), Gaps = 18/149 (12%)

Query: 112 PGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +GP G+    GE G  G  G  G+ G  G PG  GPPG  GIPG    RGP G  G 
Sbjct: 822 PGARGPPGKTGIDGEPGIPGSRGPPGKMGSDGIPGARGPPGKSGIPG---ARGPPGKSGL 878

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP------------GRNGM 216
           PG  G  G  GK G  G  G PG  G  GR G PG PG++G              G NG 
Sbjct: 879 PGVPGRSGPPGKNGEPGMKGMPGVNGTTGRKGSPGPPGMNGTAGEPGPMGPPGANGTNGR 938

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G PGK G PG  G PG  G  G++G TG
Sbjct: 939 SGPPGKAGTPGARGPPGKAGLPGQEGRTG 967



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/138 (42%), Positives = 74/138 (53%), Gaps = 18/138 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  G  G++G+ G  G +G  G+ G PG  GPPG  G+PG  G+ GP G  G PG 
Sbjct: 837 PGIPGSRGPPGKMGSDGIPGARGPPGKSGIPGARGPPGKSGLPGVPGRSGPPGKNGEPGM 896

Query: 172 QGIPGDEGKRGPKGDMGYPG---------------RIGLDGRDGLPGE---PGLDGIPGR 213
           +G+PG  G  G KG  G PG                 G +GR G PG+   PG  G PG+
Sbjct: 897 KGMPGVNGTTGRKGSPGPPGMNGTAGEPGPMGPPGANGTNGRSGPPGKAGTPGARGPPGK 956

Query: 214 NGMDGIPGKDGLPGKDGI 231
            G+ G  G+ GLPGKDG+
Sbjct: 957 AGLPGQEGRTGLPGKDGV 974



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/136 (43%), Positives = 73/136 (53%), Gaps = 15/136 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ G  G  G  GA+G  G +G  G KG  G+ GP GP G+ G +G+RG  G  G  GP+
Sbjct: 286 GMPGEPGSNGTDGAEGPEGPQGPVGPKGEKGMQGPAGPSGMNGTKGERGMIGPEGPEGPR 345

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG  G  GP+G+MG               E G+ G+PGRNG DG+ G  G PG +G  
Sbjct: 346 GFPGFNGTDGPRGEMG---------------ERGMPGVPGRNGTDGVKGDKGDPGNNGTM 390

Query: 233 GTNGTNGEKGMTGPRG 248
           G  G  G KGM GP G
Sbjct: 391 GPMGPPGMKGMDGPPG 406



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 87/178 (48%), Gaps = 29/178 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE------RGEKGAPGVVGPPGPQGIPGDEGKRGPKG- 164
           PG  G  G +GE+G +G  GV G       +G+KG PG  G  GP G PG +G  GP G 
Sbjct: 348 PGFNGTDGPRGEMGERGMPGVPGRNGTDGVKGDKGDPGNNGTMGPMGPPGMKGMDGPPGR 407

Query: 165 -------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLD 208
                         +G  G  GI G +G +G  G+ G  G  G DGR G PG    PG +
Sbjct: 408 AGKPGPPGLPGNGSLGRDGKPGINGTDGMKGKPGEKGMKGEPGSDGRAGKPGPAGVPGFN 467

Query: 209 GIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  GM G PG  GL G  G       PG NGT G+KG TG  GN G+ GING  G
Sbjct: 468 GTKGEKGMSGQPGIPGLNGTAGARGERGPPGLNGTKGDKGDTGSPGNDGRDGINGTKG 525



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 85/196 (43%), Gaps = 49/196 (25%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD----- 165
           P G+ G  G KGE G  G+ G+ G  G  GA G  GPPG  G  GD+G  G  G+     
Sbjct: 460 PAGVPGFNGTKGEKGMSGQPGIPGLNGTAGARGERGPPGLNGTKGDKGDTGSPGNDGRDG 519

Query: 166 ----------------MGYP------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                           MG P      GP G PG  G RG  G+ G  G  GL G+ G PG
Sbjct: 520 INGTKGEKGSDGSDGLMGPPGSNGTMGPMGPPGFNGSRGDPGEKGMIGPPGLRGQTGKPG 579

Query: 204 EPGLDGIPGRN----------------------GMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            PG+ G  G                        GM G PG+ G PG  G PGTNGT+G  
Sbjct: 580 SPGVCGCNGTEGGVQGPPGPPGPRGGTGKPGEPGMKGDPGRKGTPGDPGAPGTNGTDGRA 639

Query: 242 GMTGPRGNRGKSGING 257
           G  GP G +G+ G+ G
Sbjct: 640 GKPGPAGMKGEKGMAG 655



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 82/196 (41%), Gaps = 46/196 (23%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---- 151
           L+   G   +     PPG  G  G  GE G  G  G++G+ G+ G+PGV G  G +    
Sbjct: 535 LMGPPGSNGTMGPMGPPGFNGSRGDPGEKGMIGPPGLRGQTGKPGSPGVCGCNGTEGGVQ 594

Query: 152 ------------------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
                             G+ GD G++G  GD G PG  G  G  GK GP G  G  G  
Sbjct: 595 GPPGPPGPRGGTGKPGEPGMKGDPGRKGTPGDPGAPGTNGTDGRAGKPGPAGMKGEKGMA 654

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPG------------------------KDGLPGKD 229
           G  G +G  GE G+ G PG NG  G+PG                        ++G PG  
Sbjct: 655 GPAGMNGTRGEKGMTGPPGLNGTFGLPGMNGSDGPPGPPGRDGFNGSTGQRGEEGPPGSR 714

Query: 230 GIPGTNGTNGEKGMTG 245
           G+PG  G  G KGM G
Sbjct: 715 GVPGKMGLQGMKGMNG 730



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 78/176 (44%), Gaps = 37/176 (21%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
           G +G  G PG  G PG +GIPG  G+ G  G  G  G  G PG +G  GP G  G PG  
Sbjct: 167 GMKGPPGDPGARGHPG-KGIPGVPGRNGTDGTNGTDGTPGDPGSKGLPGPPGRKGLPGDP 225

Query: 194 GLDGRDGLPGEPGLDGIPGR------------------NGMDGIPGK------------- 222
           G+ G+   PG+ G+ G PGR                  NG DG PG              
Sbjct: 226 GMKGK---PGDDGMKGEPGRKGNPGPPGTDGPPGLPGRNGTDGSPGSTGKPGPPGSIGPP 282

Query: 223 --DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
              G+PG+ G  GT+G  G +G  GP G +G+ G+ G  G   +   K E   + P
Sbjct: 283 GMKGMPGEPGSNGTDGAEGPEGPQGPVGPKGEKGMQGPAGPSGMNGTKGERGMIGP 338



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 82/204 (40%), Gaps = 66/204 (32%)

Query: 123 EIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGP------KGDMGYPG 170
           E G KG+ G KG  G+ GAPG        G PGP G+ G++G  GP      +G+ G  G
Sbjct: 611 EPGMKGDPGRKGTPGDPGAPGTNGTDGRAGKPGPAGMKGEKGMAGPAGMNGTRGEKGMTG 670

Query: 171 PQGI---------------------------PGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           P G+                            G  G+ GP G  G PG++GL G  G+ G
Sbjct: 671 PPGLNGTFGLPGMNGSDGPPGPPGRDGFNGSTGQRGEEGPPGSRGVPGKMGLQGMKGMNG 730

Query: 204 E---------------------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                                        G DG PG  G  G PGK G  G +G  G NG
Sbjct: 731 SKGEMGPMGPPGEPGPPGNNGTMGPMGPAGQDGDPGTPGSRGPPGKMGPRGPEGPLGPNG 790

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
           T GE G  GP+G+ G  G  G PG
Sbjct: 791 TQGEPGDDGPKGDPGTPGARGPPG 814



 Score = 45.8 bits (107), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 77/186 (41%), Gaps = 51/186 (27%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKG 185
           E G+KG+ G KG PG  G PG  G  G  GK GP   KG+ G  GP G+ G  G++G  G
Sbjct: 611 EPGMKGDPGRKGTPGDPGAPGTNGTDGRAGKPGPAGMKGEKGMAGPAGMNGTRGEKGMTG 670

Query: 186 DMGYPGRIGLDGRDGLP---------------------GEPGLDGIPGRNGMDGIPGKDG 224
             G  G  GL G +G                       G PG  G+PG+ G+ G+ G +G
Sbjct: 671 PPGLNGTFGLPGMNGSDGPPGPPGRDGFNGSTGQRGEEGPPGSRGVPGKMGLQGMKGMNG 730

Query: 225 L---------------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                                        G+DG PGT G+ G  G  GPRG  G  G NG
Sbjct: 731 SKGEMGPMGPPGEPGPPGNNGTMGPMGPAGQDGDPGTPGSRGPPGKMGPRGPEGPLGPNG 790

Query: 258 VPGTPA 263
             G P 
Sbjct: 791 TQGEPG 796



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 97/236 (41%), Gaps = 64/236 (27%)

Query: 78  NSTHNNPWVWLN-AYSRIPLVAMQG-------FCNSTKEYCPPGLQGPIGQ--KGEIGAK 127
           ++T  NP  +    +S +  +A  G       F N+T    PPG  G  G   KG  G  
Sbjct: 130 DATQANPATFNTFQFSSLTSIATTGCQSIQVYFTNTTGMKGPPGDPGARGHPGKGIPGVP 189

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  G  G  G  G PG    PG +G+PG  G++G  GD   PG +G PGD+G +G     
Sbjct: 190 GRNGTDGTNGTDGTPGD---PGSKGLPGPPGRKGLPGD---PGMKGKPGDDGMKG----- 238

Query: 188 GYPGRI------------------GLDGR------------------DGLPGEPGLDGIP 211
             PGR                   G DG                    G+PGEPG +G  
Sbjct: 239 -EPGRKGNPGPPGTDGPPGLPGRNGTDGSPGSTGKPGPPGSIGPPGMKGMPGEPGSNGTD 297

Query: 212 GRNGMD------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G +      G  G+ G+ G  G  G NGT GE+GM GP G  G  G  G  GT
Sbjct: 298 GAEGPEGPQGPVGPKGEKGMQGPAGPSGMNGTKGERGMIGPEGPEGPRGFPGFNGT 353



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 52/109 (47%), Gaps = 27/109 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGK 159
           PG  GP G+ GE G KG  GV G  G KG+PG   PPG  G              G  G+
Sbjct: 882 PGRSGPPGKNGEPGMKGMPGVNGTTGRKGSPG---PPGMNGTAGEPGPMGPPGANGTNGR 938

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            GP G  G PG          RGP G  G PG+   +GR GLPG+ G++
Sbjct: 939 SGPPGKAGTPG---------ARGPPGKAGLPGQ---EGRTGLPGKDGVE 975



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 58/121 (47%), Gaps = 31/121 (25%)

Query: 143  GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---------- 192
            G VGP GP+G+ G  G+RG        G  G  GD G +G KG  G PGR          
Sbjct: 1012 GTVGPVGPKGMNGTSGERG------LTGKPGAIGDPGMKGIKGCKGEPGRDVVIEGPQGP 1065

Query: 193  ------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                        IG  GR GLPGE GL G+ G  G +   G+ G+ G DG PG NGT GE
Sbjct: 1066 PGPPGRKGVPGAIGPPGRKGLPGEIGLMGMKGDKGNE---GETGMKGMDGEPGLNGTKGE 1122

Query: 241  K 241
            K
Sbjct: 1123 K 1123



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 78/203 (38%), Gaps = 70/203 (34%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP---------- 175
            A G  G  G  G+ G PG  GPPG  G+PG EG+       G PG  G+           
Sbjct: 932  ANGTNGRSGPPGKAGTPGARGPPGKAGLPGQEGR------TGLPGKDGVEGPEGPKGDPG 985

Query: 176  --------------------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
                                      G  G  GPKG  G  G  GL G+ G  G+PG+ G
Sbjct: 986  PPGNNGTDGRKGPPGPPGQDGPPGLNGTVGPVGPKGMNGTSGERGLTGKPGAIGDPGMKG 1045

Query: 210  IPGRNGMDGIPGKD----------------------GLPGKDGIPGTNGTNGEKGMTGPR 247
            I    G  G PG+D                      G PG+ G+PG  G     GM G +
Sbjct: 1046 I---KGCKGEPGRDVVIEGPQGPPGPPGRKGVPGAIGPPGRKGLPGEIGL---MGMKGDK 1099

Query: 248  GNRGKSGINGVPGTPAICAYKRE 270
            GN G++G+ G+ G P +   K E
Sbjct: 1100 GNEGETGMKGMDGEPGLNGTKGE 1122


>gi|2627209|dbj|BAA23578.1| collagen a1 XIX chain [Mus musculus]
          Length = 1136

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/191 (41%), Positives = 99/191 (51%), Gaps = 38/191 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGK 159
           PG  G +G KG  G  GE   KGE+G++G PG++GP G +G             PG +G+
Sbjct: 461 PGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEPGDPGPPGLLGSPGLKGQ 520

Query: 160 ---------RGPKGDMGYPGPQGIPGDEGKRGPKGD----MGYPGRIGLDGRDG-----L 201
                    RGP GD+G PG  GIPG +G +G KGD    +G PG  GL G  G     L
Sbjct: 521 QGPAGSMKPRGPPGDVGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDAGPPGISL 580

Query: 202 PGEPGLDGIPGR------NGMDGIPGKDGLPGKDGIPGTN--GTNGEKGMTGPRGNRGKS 253
           PG+PGLDG PG        G  G+PG  G PG  G PG    G  G +G  G  G +G  
Sbjct: 581 PGKPGLDGNPGSPGPREPKGERGLPGLHGSPGDTGPPGVGIPGRTGSQGPAGEPGIQGPR 640

Query: 254 GINGVPGTPAI 264
           G+ G+PGTP +
Sbjct: 641 GLPGLPGTPGM 651



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 81/148 (54%), Gaps = 13/148 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG+ G  G M  +G  G+ G PG  G PG QG+ G++G  G     G  GP G+PG +
Sbjct: 516 GLKGQQGPAGSMKPRGPPGDVGLPGEHGIPGKQGVKGEKGDPG-----GRLGPPGLPGLK 570

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPG--EP-GLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  GP G +  PG+ GLDG  G PG  EP G  G+P   G+ G PG  G PG  GIPG  
Sbjct: 571 GDAGPPG-ISLPGKPGLDGNPGSPGPREPKGERGLP---GLHGSPGDTGPPGV-GIPGRT 625

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G+ G  G  G +G RG  G+ G PG P 
Sbjct: 626 GSQGPAGEPGIQGPRGLPGLPGTPGMPG 653



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 86/178 (48%), Gaps = 45/178 (25%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG---PQGI---- 174
           GE GA G  G KG+ G  G PG VGP G +G PG+   +G KGD G PG   PQGI    
Sbjct: 444 GEHGASGPKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEP 503

Query: 175 -----------PGDEGKRGPKGDM---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                      PG +G++GP G M   G PG +GL         PG  GIPG+ G+ G  
Sbjct: 504 GDPGPPGLLGSPGLKGQQGPAGSMKPRGPPGDVGL---------PGEHGIPGKQGVKGEK 554

Query: 221 GK-------DGLPGKDG--------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G         GLPG  G        +PG  G +G  G  GPR  +G+ G+ G+ G+P 
Sbjct: 555 GDPGGRLGPPGLPGLKGDAGPPGISLPGKPGLDGNPGSPGPREPKGERGLPGLHGSPG 612



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 68/147 (46%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA-------PGVVGPP 148
           L   QG   S K   PPG    +G  GE G  G+ GVKGE+G+ G        PG+ G  
Sbjct: 517 LKGQQGPAGSMKPRGPPGD---VGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDA 573

Query: 149 GPQGI-----------PGDEGKRGPKGDMGYPGPQGIPGDEG-----------KRGPKGD 186
           GP GI           PG  G R PKG+ G PG  G PGD G            +GP G+
Sbjct: 574 GPPGISLPGKPGLDGNPGSPGPREPKGERGLPGLHGSPGDTGPPGVGIPGRTGSQGPAGE 633

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG PG+
Sbjct: 634 PGIQGPRGLPGLPGTPGMPGNDGAPGK 660



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 15/141 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G +G  GVKG+RG  G PG+ G       PGP G+PG++G+RGP GD G+PGP+
Sbjct: 854 GAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPGPPGVPGEQGERGPIGDTGFPGPE 913

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                    GP G  G  G+ GL G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 914 ---------GPSGKPGINGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGERGKP 964

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G  G  GP G++G +
Sbjct: 965 GLTGMKGAIGPVGPAGSKGST 985



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 64/138 (46%), Gaps = 42/138 (30%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
           PG  G+PG EG  G KGD G  GP GI G               ++G+RGP GD G+PG 
Sbjct: 853 PGAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPGPPGVPGEQGERGPIGDTGFPGP 912

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMT----- 244
            G  G+ G                  I GKDGLPG  GI   PG  G  GE+G       
Sbjct: 913 EGPSGKPG------------------INGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGD 954

Query: 245 -GPRGNRGKSGINGVPGT 261
            GP+G RGK G+ G+ G 
Sbjct: 955 RGPQGERGKPGLTGMKGA 972



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 94/248 (37%), Gaps = 96/248 (38%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPP------ 148
           G++G IG+KGE GAKG+ G+ G  G+                  KG  G  GPP      
Sbjct: 331 GIKGEIGEKGEPGAKGDSGLDGLNGQDGLKGDSGPQGPPGPKGDKGDMGPPGPPALTGSI 390

Query: 149 ---GPQGIPGDEGKRGPK-----------------------------------GDMGYPG 170
              GPQG PG EG+RG +                                   G+ G  G
Sbjct: 391 GIQGPQGPPGKEGQRGRRGKTGPPGNPGPPGPPGPPGLQGLQQPFGGYFNKGTGEHGASG 450

Query: 171 PQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG--------------- 209
           P+      G+PG  G  GPKG  G PG     G  G  GEPGL G               
Sbjct: 451 PKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEPGDPGPPG 510

Query: 210 ---IPGRNGMD---------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR-GNRGKSGIN 256
               PG  G           G PG  GLPG+ GIPG  G  GEKG  G R G  G  G+ 
Sbjct: 511 LLGSPGLKGQQGPAGSMKPRGPPGDVGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLK 570

Query: 257 GVPGTPAI 264
           G  G P I
Sbjct: 571 GDAGPPGI 578


>gi|47220033|emb|CAG12181.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1097

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 90/172 (52%), Gaps = 15/172 (8%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           QGPIG  GE G++G+ G+ G  G  G PG  G  GP G  G +G  GP+G +GYPG +G+
Sbjct: 596 QGPIGLPGEKGSQGKQGMPGLPGIDGPPGHPGREGPAGEKGLQGLPGPQGPVGYPGIRGV 655

Query: 175 PGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGL------DGIPGRNGMDGI 219
            G++G  G KGDMG          PG  G DG +G  G+ G        G+ G  G  G+
Sbjct: 656 KGEDGFPGAKGDMGIKGDQGDNGTPGARGEDGPEGQKGQAGPLGDTGGPGVAGEKGKLGV 715

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           PG  G PG+ G  G  G  G KG TG  G +G  G NG PG   +   + +S
Sbjct: 716 PGLPGYPGRQGPKGVRGERGAKGPTGKPGEKGFQGKNGPPGPTGVVGPQGKS 767



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 90/178 (50%), Gaps = 27/178 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
           GL G +G KG++G  G  G+ G RG  G PG  G     G  G+PG++G RG +G  G P
Sbjct: 504 GLPGLVGPKGKMGKTGRTGMDGGRGIPGDPGSKGDRGFDGLPGLPGNKGHRGDRGKPGLP 563

Query: 170 GPQGIPGDEGKRG------------------PKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           GP G PG++G RG                   +G +G PG  G  G+ G+PG PG+DG P
Sbjct: 564 GPNGQPGEKGARGLVGPRGPPGSPGQPGLPGSQGPIGLPGEKGSQGKQGMPGLPGIDGPP 623

Query: 212 GRNGMDGIPGK---DGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G +G  G+    GLPG     G PG  G  GE G  G +G+ G  G  G  GTP 
Sbjct: 624 GHPGREGPAGEKGLQGLPGPQGPVGYPGIRGVKGEDGFPGAKGDMGIKGDQGDNGTPG 681



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 87/173 (50%), Gaps = 30/173 (17%)

Query: 112 PGLQGPIGQKGEIGAKG---------------------EMGVKGERGEKGAPGVVGPPGP 150
           PGL GP GQ GE GA+G                      +G+ GE+G +G  G+ G PG 
Sbjct: 560 PGLPGPNGQPGEKGARGLVGPRGPPGSPGQPGLPGSQGPIGLPGEKGSQGKQGMPGLPGI 619

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G PG  G+ GP G+ G    QG+PG      P+G +GYPG  G+ G DG PG  G  GI
Sbjct: 620 DGPPGHPGREGPAGEKGL---QGLPG------PQGPVGYPGIRGVKGEDGFPGAKGDMGI 670

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G +G PG  G  G +G  G  G  G+ G  G  G +GK G+ G+PG P 
Sbjct: 671 KGDQGDNGTPGARGEDGPEGQKGQAGPLGDTGGPGVAGEKGKLGVPGLPGYPG 723



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 92/184 (50%), Gaps = 30/184 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------- 161
           PG  G  G +G  G  G  G KG RG++G PG+   PGP G PG++G RG          
Sbjct: 530 PGDPGSKGDRGFDGLPGLPGNKGHRGDRGKPGL---PGPNGQPGEKGARGLVGPRGPPGS 586

Query: 162 --PKGDMGYPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGM 216
               G  G  GP G+PG++G +G +G  G P   G  G  GR+G  GE GL G+PG  G 
Sbjct: 587 PGQPGLPGSQGPIGLPGEKGSQGKQGMPGLPGIDGPPGHPGREGPAGEKGLQGLPGPQGP 646

Query: 217 DGIPGKDGLPGKDGIPGT------------NGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G PG  G+ G+DG PG             NGT G +G  GP G +G++G  G  G P +
Sbjct: 647 VGYPGIRGVKGEDGFPGAKGDMGIKGDQGDNGTPGARGEDGPEGQKGQAGPLGDTGGPGV 706

Query: 265 CAYK 268
              K
Sbjct: 707 AGEK 710



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 9/143 (6%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            +QG          PG++G  G+ G  GAKG+MG+KG++G+ G PG  G  GP+   G +
Sbjct: 636 GLQGLPGPQGPVGYPGIRGVKGEDGFPGAKGDMGIKGDQGDNGTPGARGEDGPE---GQK 692

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G+ GP GD G P   G+ G++GK G  G  GYPGR    G  G+ GE G  G  G+ G  
Sbjct: 693 GQAGPLGDTGGP---GVAGEKGKLGVPGLPGYPGR---QGPKGVRGERGAKGPTGKPGEK 746

Query: 218 GIPGKDGLPGKDGIPGTNGTNGE 240
           G  GK+G PG  G+ G  G +GE
Sbjct: 747 GFQGKNGPPGPTGVVGPQGKSGE 769



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 76/145 (52%), Gaps = 12/145 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G +G +G  G  GVKGE G  GA G +      GI GD+G  G  G  G  GP+
Sbjct: 636 GLQGLPGPQGPVGYPGIRGVKGEDGFPGAKGDM------GIKGDQGDNGTPGARGEDGPE 689

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
              G +G+ GP GD G PG  G  G+ G+   PGL G PGR G  G+ G+ G  G  G P
Sbjct: 690 ---GQKGQAGPLGDTGGPGVAGEKGKLGV---PGLPGYPGRQGPKGVRGERGAKGPTGKP 743

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G+ G  GP G  G  G +G
Sbjct: 744 GEKGFQGKNGPPGPTGVVGPQGKSG 768



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 71/143 (49%), Gaps = 9/143 (6%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            +G  G +G  G  G  GE G PG VGP GP G  G+ G++GP G  G          +G+
Sbjct: 907  QGATGERGPAGPAGSIGEPGRPGSVGPAGPMGEKGEPGEKGPAGPAGR---------DGQ 957

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
             GP G  G  G  G  G DG  G PG  GI G  G  G PG  GL G+ G  G  G+ G 
Sbjct: 958  PGPAGLPGAAGPPGPPGEDGDKGPPGPAGILGPVGQPGSPGMPGLSGEKGETGHVGSLGP 1017

Query: 241  KGMTGPRGNRGKSGINGVPGTPA 263
             G  GPRG +G +G  G PG P 
Sbjct: 1018 AGQHGPRGPQGPAGSEGQPGMPG 1040



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 82/190 (43%), Gaps = 58/190 (30%)

Query: 129 EMGVKGERGEKGAP-----------------GVVGPPGPQ-GIPGDEGKRGPKGDMGYPG 170
           +M  +GE+G+KG P                 G+ GPPG    +P        KG M  P 
Sbjct: 429 QMSPEGEKGQKGEPAITEPGPPGRPGLPGADGIRGPPGTMLMLPFHFAGNSQKGPMTSPQ 488

Query: 171 P----------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------GLDGIP 211
                      QG+ G  G  GPKG MG  GR G+DG  G+PG+P         GL G+P
Sbjct: 489 EAQARAILQQTQGLRGLPGLVGPKGKMGKTGRTGMDGGRGIPGDPGSKGDRGFDGLPGLP 548

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG---------------------TNGEKGMTGPRGNR 250
           G  G  G  GK GLPG +G PG  G                     + G  G+ G +G++
Sbjct: 549 GNKGHRGDRGKPGLPGPNGQPGEKGARGLVGPRGPPGSPGQPGLPGSQGPIGLPGEKGSQ 608

Query: 251 GKSGINGVPG 260
           GK G+ G+PG
Sbjct: 609 GKQGMPGLPG 618



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 64/150 (42%), Gaps = 27/150 (18%)

Query: 102  FCNSTKEYCPPGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG--- 155
            +  +T E  P G  G IG+ G    +G  G MG KGE GEK      GP GP G  G   
Sbjct: 906  YQGATGERGPAGPAGSIGEPGRPGSVGPAGPMGEKGEPGEK------GPAGPAGRDGQPG 959

Query: 156  ---------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                           ++G +GP G  G  GP G PG  G  G  G+ G  G +G  G  G
Sbjct: 960  PAGLPGAAGPPGPPGEDGDKGPPGPAGILGPVGQPGSPGMPGLSGEKGETGHVGSLGPAG 1019

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              G  G  G  G  G  G+PG  G PG  G
Sbjct: 1020 QHGPRGPQGPAGSEGQPGMPGGVGQPGSVG 1049


>gi|667031|emb|CAA46237.1| alpha1 (X) collagen [Mus musculus]
          Length = 629

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 14/156 (8%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP-----QGIPGDEGKRGPKGDMGYPGPQ 172
           IG+ G IG+ G+ G+ GE+G  GAPG+ GPPG      QG+PG  G+RGP          
Sbjct: 212 IGKPGAIGSPGQPGIPGEKGHPGAPGIAGPPGAPGFGKQGLPGFRGQRGP---------A 262

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG  G +G +G  G+PG  GL G  G  G  G  GIPG +G+ G  G+ GL G  G P
Sbjct: 263 GLPGAPGAKGERGPAGHPGEPGLPGSPGNMGPQGPKGIPGNHGIPGAKGEIGLVGPAGPP 322

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G  G+ G  G  G+ G+NG  G P +   K
Sbjct: 323 GARGARGPPGLDGKTGYPGEPGLNGPKGNPGLPGQK 358



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 81/144 (56%), Gaps = 6/144 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GP G  G  GAKGE G  G  GE G   +PG +GP GP+GIPG+ G  G KG++G  
Sbjct: 257 GQRGPAGLPGAPGAKGERGPAGHPGEPGLPGSPGNMGPQGPKGIPGNHGIPGAKGEIGLV 316

Query: 170 GPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GP G PG  G RGP G     GYPG  GL+G  G PG PG  G PG  G  G+ G  G  
Sbjct: 317 GPAGPPGARGARGPPGLDGKTGYPGEPGLNGPKGNPGLPGQKGDPGVGGSPGLRGPVGPV 376

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G+PG NG  G +G  G  G R
Sbjct: 377 GAKGVPGHNGEAGPRGEPGIPGTR 400



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 60/115 (52%), Gaps = 6/115 (5%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
           G   S     P G +G  G  G  GAKGE+G+ G  G  GA G  GPPG     G PG+ 
Sbjct: 284 GLPGSPGNMGPQGPKGIPGNHGIPGAKGEIGLVGPAGPPGARGARGPPGLDGKTGYPGEP 343

Query: 158 GKRGPKGDMGYPGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
           G  GPKG+ G PG +G P   G  G RGP G +G  G  G +G  G  GEPG+ G
Sbjct: 344 GLNGPKGNPGLPGQKGDPGVGGSPGLRGPVGPVGAKGVPGHNGEAGPRGEPGIPG 398



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 87/219 (39%), Gaps = 75/219 (34%)

Query: 119 GQKGEI-----------------------------------GAKGEMGVKGERGEKGAPG 143
           G KG+I                                   GA G  G  GE+G +GAPG
Sbjct: 73  GHKGDIGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGLTGAPGPRGFPGEKGAQGAPG 132

Query: 144 VVGPPGPQGI--PGDEGKRGP-----------------KGDMGYPGPQGIPGDEG----- 179
           V G  G  G   PG  G+RG                  +G+ G+PG  GI GD G     
Sbjct: 133 VNGRKGETGYGSPGRPGERGLPGPQGPIGPPGPSGVGRRGENGFPGQPGIKGDRGFPGEM 192

Query: 180 -------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP--GKDG 224
                        K+G +G +G PG IG  G+ G+PGE G  G PG  G  G P  GK G
Sbjct: 193 GPSGLPGPQGPPGKQGREG-IGKPGAIGSPGQPGIPGEKGHPGAPGIAGPPGAPGFGKQG 251

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           LPG  G  G  G  G  G  G RG  G  G  G+PG+P 
Sbjct: 252 LPGFRGQRGPAGLPGAPGAKGERGPAGHPGEPGLPGSPG 290


>gi|432848610|ref|XP_004066431.1| PREDICTED: collagen alpha-2(V) chain-like [Oryzias latipes]
          Length = 1556

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 95/177 (53%), Gaps = 16/177 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEG 158
           PPGL G  G  G  G+ G  G KG+ G+ G PG+ G             PGP G+ G++G
Sbjct: 490 PPGLVGAAGLPGPQGSTGAPGAKGQLGDGGVPGLKGEPGMKGERGEHGTPGPIGLMGEDG 549

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           KRGP+GD G  GP   PG  G+ G  G+ G+PG  GL G+ G PGE GL G+ G  G+ G
Sbjct: 550 KRGPRGDAGSIGP---PGPAGETGAPGNRGFPGSDGLPGQKGAPGERGLPGVGGAKGLSG 606

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
            PG++G PG  G  G  G  G +G  G  G  G +G +G PG PA  A  R S   +
Sbjct: 607 DPGRNGEPGLTGARGLAGPIGAQGAEGGPGQMGLAGEDGKPG-PAGAAGNRGSAGTM 662



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/162 (43%), Positives = 88/162 (54%), Gaps = 6/162 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGP---PGPQGIPGDEGKRGPKGDM 166
           G  GP GQ+G  GA G  G +G  G    +G PG+VG    PGPQG  G  G +G  GD 
Sbjct: 459 GPSGPTGQRGAAGADGSPGPRGSSGIAGVQGPPGLVGAAGLPGPQGSTGAPGAKGQLGDG 518

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG +G PG +G+RG  G  G  G +G DG+ G  G+ G  G PG  G  G PG  G P
Sbjct: 519 GVPGLKGEPGMKGERGEHGTPGPIGLMGEDGKRGPRGDAGSIGPPGPAGETGAPGNRGFP 578

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G DG+PG  G  GE+G+ G  G +G SG  G  G P +   +
Sbjct: 579 GSDGLPGQKGAPGERGLPGVGGAKGLSGDPGRNGEPGLTGAR 620



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 92/195 (47%), Gaps = 27/195 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------ 143
           LV   G          PG +G +G  G  G KGE G+KGERGE G PG            
Sbjct: 493 LVGAAGLPGPQGSTGAPGAKGQLGDGGVPGLKGEPGMKGERGEHGTPGPIGLMGEDGKRG 552

Query: 144 ------VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
                  +GPPGP G  G  G RG  G  G PG +G PG+ G  G  G  G  G  G +G
Sbjct: 553 PRGDAGSIGPPGPAGETGAPGNRGFPGSDGLPGQKGAPGERGLPGVGGAKGLSGDPGRNG 612

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------GMTGPR---G 248
             GL G  GL G  G  G +G PG+ GL G+DG PG  G  G +      G+ GP+   G
Sbjct: 613 EPGLTGARGLAGPIGAQGAEGGPGQMGLAGEDGKPGPAGAAGNRGSAGTMGLPGPKGFAG 672

Query: 249 NRGKSGINGVPGTPA 263
           + GK+G  G PG P 
Sbjct: 673 DAGKAGEAGSPGPPG 687



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 97/205 (47%), Gaps = 23/205 (11%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QG  G+ GE G  GE G +G  G  G PG  G PGP G PG+ G  G +G  G+P 
Sbjct: 298 PTGGQGIPGEAGEPGPMGEPGHRGPDGAPGKPGRDGEPGPDGAPGEPGNPGSQGPRGFP- 356

Query: 171 PQGIPGDEGKRGPKGDMGYP------------------GRIGLDGRDGLPGEPGLDGIPG 212
             G+PG+ G +GPKG  G P                  GRIG  G  G  G PG  G PG
Sbjct: 357 --GLPGNRGLKGPKGKSGAPGTMGAPGPQGPPGLQGERGRIGPTGHVGKQGTPGDVGKPG 414

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
             G  GIPG  G PG  G+ G  G  G +G+ GP+G RG +G  G  G            
Sbjct: 415 PMGPIGIPGLPGYPGNPGMKGEPGPAGVRGILGPQGPRGDAGRVGPSGPTGQRGAAGADG 474

Query: 273 SLLP--NSETSQLLIPPTIVGSEHI 295
           S  P  +S  + +  PP +VG+  +
Sbjct: 475 SPGPRGSSGIAGVQGPPGLVGAAGL 499



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 100 QGFCNSTKEYCP---PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           QG      E  P   PG +GP G  G+ G  GE G  G  GE G PG  GP G  G+PG+
Sbjct: 302 QGIPGEAGEPGPMGEPGHRGPDGAPGKPGRDGEPGPDGAPGEPGNPGSQGPRGFPGLPGN 361

Query: 157 EGKRGPKGDMGYP---------------------------GPQGIPGDEGKRGPKGDMGY 189
            G +GPKG  G P                           G QG PGD GK GP G +G 
Sbjct: 362 RGLKGPKGKSGAPGTMGAPGPQGPPGLQGERGRIGPTGHVGKQGTPGDVGKPGPMGPIGI 421

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG  G  G  G+ GEPG  G+ G  G  G  G  G  G  G  G  G  G  G  GPRG+
Sbjct: 422 PGLPGYPGNPGMKGEPGPAGVRGILGPQGPRGDAGRVGPSGPTGQRGAAGADGSPGPRGS 481

Query: 250 RGKSGINGVPG 260
            G +G+ G PG
Sbjct: 482 SGIAGVQGPPG 492



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 80/163 (49%), Gaps = 6/163 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGY 168
           PG  G  G KGE G  G  G+ G +G +G  G VGP GP   +G  G +G  GP+G  G 
Sbjct: 425 PGYPGNPGMKGEPGPAGVRGILGPQGPRGDAGRVGPSGPTGQRGAAGADGSPGPRGSSGI 484

Query: 169 PGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G QG PG     G  GP+G  G PG  G  G  G+PG  G  G+ G  G  G PG  GL
Sbjct: 485 AGVQGPPGLVGAAGLPGPQGSTGAPGAKGQLGDGGVPGLKGEPGMKGERGEHGTPGPIGL 544

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G+DG  G  G  G  G  GP G  G  G  G PG+  +   K
Sbjct: 545 MGEDGKRGPRGDAGSIGPPGPAGETGAPGNRGFPGSDGLPGQK 587



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 78/163 (47%), Gaps = 15/163 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QG  G  G+ G  G +G+ G  G  G PG+ G PGP G+ G  G +GP+GD G  GP 
Sbjct: 402 GKQGTPGDVGKPGPMGPIGIPGLPGYPGNPGMKGEPGPAGVRGILGPQGPRGDAGRVGPS 461

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGLP 226
           G  G  G  G  G  G  G  G+ G  G PG  G  G+PG  G  G PG        G+P
Sbjct: 462 GPTGQRGAAGADGSPGPRGSSGIAGVQGPPGLVGAAGLPGPQGSTGAPGAKGQLGDGGVP 521

Query: 227 GKDGIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPG 260
           G  G PG  G  GE G  GP         RG RG +G  G PG
Sbjct: 522 GLKGEPGMKGERGEHGTPGPIGLMGEDGKRGPRGDAGSIGPPG 564



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 86/192 (44%), Gaps = 36/192 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------------------GP 150
           PG QGP   +G  G  G  G+KG +G+ GAPG +G P                     G 
Sbjct: 347 PGSQGP---RGFPGLPGNRGLKGPKGKSGAPGTMGAPGPQGPPGLQGERGRIGPTGHVGK 403

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR 198
           QG PGD GK GP G +G PG  G PG+ G +            GP+G  G  GR+G  G 
Sbjct: 404 QGTPGDVGKPGPMGPIGIPGLPGYPGNPGMKGEPGPAGVRGILGPQGPRGDAGRVGPSGP 463

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G  G DG PG  G  GI G  G PG  G  G  G  G  G  G +G  G  G+ G+
Sbjct: 464 TGQRGAAGADGSPGPRGSSGIAGVQGPPGLVGAAGLPGPQGSTGAPGAKGQLGDGGVPGL 523

Query: 259 PGTPAICAYKRE 270
            G P +   + E
Sbjct: 524 KGEPGMKGERGE 535



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 81/173 (46%), Gaps = 6/173 (3%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGDMGYPGPQG 173
           ++G IG  G +G +G  G+ G PG +GP      PG  G PG +G+ GP G  G  GPQG
Sbjct: 391 ERGRIGPTGHVGKQGTPGDVGKPGPMGPIGIPGLPGYPGNPGMKGEPGPAGVRGILGPQG 450

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             GD G+ GP G  G  G  G DG  G  G  G+ G+ G  G+ G  G  G  G  G PG
Sbjct: 451 PRGDAGRVGPSGPTGQRGAAGADGSPGPRGSSGIAGVQGPPGLVGAAGLPGPQGSTGAPG 510

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
             G  G+ G+ G +G  G  G  G  GTP       E     P  +   +  P
Sbjct: 511 AKGQLGDGGVPGLKGEPGMKGERGEHGTPGPIGLMGEDGKRGPRGDAGSIGPP 563



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 66/137 (48%), Gaps = 18/137 (13%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLP 202
           GP G QGIPG+ G+ GP G+ G+ GP G PG    +G+ GP G  G PG  G  G  G P
Sbjct: 297 GPTGGQGIPGEAGEPGPMGEPGHRGPDGAPGKPGRDGEPGPDGAPGEPGNPGSQGPRGFP 356

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLP---------------GKDGIPGTNGTNGEKGMTGPR 247
           G PG  G+ G  G  G PG  G P               G  G  G  GT G+ G  GP 
Sbjct: 357 GLPGNRGLKGPKGKSGAPGTMGAPGPQGPPGLQGERGRIGPTGHVGKQGTPGDVGKPGPM 416

Query: 248 GNRGKSGINGVPGTPAI 264
           G  G  G+ G PG P +
Sbjct: 417 GPIGIPGLPGYPGNPGM 433



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 49/87 (56%), Gaps = 12/87 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GPIG +G  G  G+MG+ GE G+         PGP G  G+   RG  G MG PGP+
Sbjct: 621 GLAGPIGAQGAEGGPGQMGLAGEDGK---------PGPAGAAGN---RGSAGTMGLPGPK 668

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G  GD GK G  G  G PG+ G +G+D
Sbjct: 669 GFAGDAGKAGEAGSPGPPGQRGPNGKD 695



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 86/208 (41%), Gaps = 51/208 (24%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG------------------EMGVKGERGEK 139
            + G   +     P G +GP G++GE G  G                    G KG  GE 
Sbjct: 744 GLAGEAGAVGATGPRGERGPSGERGETGPNGLQGPKGSPGGPGPDGPKGNPGPKGADGEP 803

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG---------------PK 184
           GAPG+ G  G +GIPG  G +G  G +G  GP+G  G +G RG                K
Sbjct: 804 GAPGLQGMSGERGIPGSSGPKGDAGSIGEKGPEGKAGADGPRGLPGSVGPIGPGGPNGDK 863

Query: 185 GDMGYPGRIGLDGRDGLPGEPG------------------LDGIPGRNGMDGIPGKDGLP 226
           G+ G PG  G  G  G+PG  G                    G+ G  G  G+ G+ G P
Sbjct: 864 GETGPPGPTGRRGTRGVPGSTGEPGPIGPAGFPGPPGPDGQPGVKGETGEPGLKGEAGAP 923

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G+ G  GT G  G+TG +G RG  G
Sbjct: 924 GPQGMAGKPGTQGPVGVTGLKGGRGTQG 951



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 57/113 (50%), Gaps = 9/113 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGD 165
           PG +G  G++G  G  G  G+ G+ G  G PG+       GP G QG  G  G+ G  G+
Sbjct: 584 PGQKGAPGERGLPGVGGAKGLSGDPGRNGEPGLTGARGLAGPIGAQGAEGGPGQMGLAGE 643

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            G PGP G  G+   RG  G MG PG  G  G  G  GE G  G PG+ G +G
Sbjct: 644 DGKPGPAGAAGN---RGSAGTMGLPGPKGFAGDAGKAGEAGSPGPPGQRGPNG 693



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 60/129 (46%), Gaps = 12/129 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  GQKG  G +G  GV G +G  G PG  G PG  G  G  G  G +G  G PG 
Sbjct: 578 PGSDGLPGQKGAPGERGLPGVGGAKGLSGDPGRNGEPGLTGARGLAGPIGAQGAEGGPGQ 637

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G+ G++GK GP G  G  G              G  G+PG  G  G  GK G  G  G 
Sbjct: 638 MGLAGEDGKPGPAGAAGNRGSA------------GTMGLPGPKGFAGDAGKAGEAGSPGP 685

Query: 232 PGTNGTNGE 240
           PG  G NG+
Sbjct: 686 PGQRGPNGK 694



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 61/153 (39%), Gaps = 45/153 (29%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------------------------- 159
            G  G +G+ G +G  G  GPPG  G+ G+ G+                            
Sbjct: 1086 GASGPRGDAGSEGIAGAEGPPGKDGLVGERGQRGEPGPEGLPGGPGSPGNEGPVGTTGGP 1145

Query: 160  --RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
              RG KG  G PG QG PG  GK GP+G  G  G  G  G  G  G  G  G+       
Sbjct: 1146 GSRGEKGPRGPPGSQGQPGVRGKVGPQGPQGEKGGAGEQGERGQKGHRGFTGL------- 1198

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                  GLP   GI G  G  GEKG+ GP G R
Sbjct: 1199 -----QGLP---GITGATGDTGEKGIVGPAGLR 1223



 Score = 42.7 bits (99), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 47/108 (43%), Gaps = 33/108 (30%)

Query: 132  VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG--------------- 176
            VKGE GE G  G  G PGPQG+ G  G +GP G  G  G +G  G               
Sbjct: 907  VKGETGEPGLKGEAGAPGPQGMAGKPGTQGPVGVTGLKGGRGTQGQAGSPGFPGLPGGVG 966

Query: 177  ---------------DEGKRGP---KGDMGYPGRIGLDGRDGLPGEPG 206
                           + GKRGP   +G+ G PGR G  G  GLPG PG
Sbjct: 967  PPGALGAAGAAGPIGEPGKRGPSGVRGENGAPGRKGESGTPGLPGSPG 1014



 Score = 40.0 bits (92), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEG 179
            ++GE G +G  G +G PGV G  GPQG        G++G+RG KG  G+ G QG+PG  G
Sbjct: 1147 SRGEKGPRGPPGSQGQPGVRGKVGPQGPQGEKGGAGEQGERGQKGHRGFTGLQGLPGITG 1206

Query: 180  KRGPKGDMGYPGRIGL 195
              G  G+ G  G  GL
Sbjct: 1207 ATGDTGEKGIVGPAGL 1222


>gi|426362827|ref|XP_004048555.1| PREDICTED: collagen alpha-1(XXVII) chain [Gorilla gorilla gorilla]
          Length = 2003

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/145 (45%), Positives = 84/145 (57%), Gaps = 9/145 (6%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G EG +G +G  G 
Sbjct: 1497 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGA 1556

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
            PGR G+ G  GLPG     G+ GR G++GI G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 1557 PGRRGVQGLQGLPGP---RGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 1613

Query: 247  RGNRGKSGINGVPGTPAICAYKRES 271
             G RG  G+ G+PG      +K ES
Sbjct: 1614 AGKRGNPGVAGLPGAQGPPGFKGES 1638



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 87/162 (53%), Gaps = 21/162 (12%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYPGPQGI 174
           K   GAKG+MG+ G  G  G PG  G    PGP G PG++G+ GP+G     GYPG QG+
Sbjct: 827 KAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGL 886

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G+PG  G+ G+ G PG 
Sbjct: 887 PGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGL 946

Query: 235 NGTNGEK---------------GMTGPRGNRGKSGINGVPGT 261
           +G  GE                G+ GP G  G  G+ G+ G+
Sbjct: 947 DGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGS 988



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 89/175 (50%), Gaps = 30/175 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDE--------- 157
            G +GP G++G+ GA G  GV+G +G  G  GVVG        GP G+PG +         
Sbjct: 1543 GAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQ 1602

Query: 158  ------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                        GKRG  G  G PG QG PG +G+ G  G +G PG+ G +GR GLP   
Sbjct: 1603 GDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLPGNQ 1662

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G
Sbjct: 1663 GEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVG 1717



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 86/176 (48%), Gaps = 18/176 (10%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP G+ G  G+KG  G KG++G+ GAPG  G  G QG+PG  
Sbjct: 1513 GVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPR 1572

Query: 158  GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G +G  G  GP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 1573 GVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1632

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G  G+PG+    G PGK G  G+ G+PG  G  G KG  G  G  G  G+ G+
Sbjct: 1633 GFKGESGLPGQL---GPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGL 1685



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG +GPPG         KRG +G  G 
Sbjct: 1608 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGRTGL 1658

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 1659 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGP 1718

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1719 LGILGPSGLPGPKGDKGSRGDWG 1741



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 85/169 (50%), Gaps = 30/169 (17%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G+ G +G  G  G++G+ G PG  G PGP+G  G EG +G +G  G PG +G+ G +
Sbjct: 1507 GYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQ 1566

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGE---------------------------PGLDGIP 211
            G  GP+G +G  G  G+ G DGLPG                            PG+ G+P
Sbjct: 1567 GLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLP 1626

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G+ GLPG+ G PG  GT G  G+    GN+G+ G  G PG
Sbjct: 1627 GAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLP---GNQGEPGSKGQPG 1672



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 42/191 (21%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KG +G+ GE G+KG++GE+G PGV       G PG +G +G +G  G+PG
Sbjct: 973  PIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGV------SGDPGFQGDKGSQGLPGFPG 1026

Query: 171  PQGIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             +G PG  GK G KG               D+G PG    +G +G+ G+PG  G+PG  G
Sbjct: 1027 ARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGD---NGPEGMKGKPGARGLPGPRG 1083

Query: 216  ------------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                              ++G PG+ G PG+ G+ G  G  G+ G  GP G +G  G  G
Sbjct: 1084 QLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIG 1143

Query: 258  VPGTPAICAYK 268
            + G P I   K
Sbjct: 1144 LVGEPGIVGEK 1154



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
            PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 845  PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGL 904

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN----------- 214
            PG  G+PG +G+RG  G  G  G++G+ G  G+ GE   PGLDG PG             
Sbjct: 905  PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGL 964

Query: 215  -GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+ G  G PG  G+ G  G+ GE G+ G +G +G  G++G PG
Sbjct: 965  IGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 1011



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 76/144 (52%), Gaps = 12/144 (8%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++G
Sbjct: 817 QKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQG 867

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 868 QPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 927

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G RG  G++G PG
Sbjct: 928 KMGMPGFPGVFGERGPPGLDGNPG 951



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 83/187 (44%), Gaps = 42/187 (22%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPK--------- 163
            GP G +G IG  G  G+ G  GE+G PGV G  G  G+PG     G+RGP          
Sbjct: 894  GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGEL 953

Query: 164  ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                        GD+G  GP G PG +G +G  G +G PG  G  G  G+P   G+PG  
Sbjct: 954  GLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQ 1013

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKS 253
            G  G  G+ G PG  G PG  G  G  G+                G  G  GP G +GK 
Sbjct: 1014 GDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 1073

Query: 254  GINGVPG 260
            G  G+PG
Sbjct: 1074 GARGLPG 1080



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 80/203 (39%), Gaps = 61/203 (30%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------------------GPQGIPGDE 157
            G +G+ G +GE G  G +G KG  G +G                       G  G PG  
Sbjct: 1383 GPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGATGAPGRM 1442

Query: 158  GKRGPKGDMGYPGPQGI----------------------------------PGDEGKRGP 183
            G +G  G  GY G +GI                                   GD G RG 
Sbjct: 1443 GAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGE 1502

Query: 184  KGDMGYPGRIGLD------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
             GD GYPG+ G+       G+ G PG PG  G PG  G  G  G  G  GK G PG  G 
Sbjct: 1503 PGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGV 1562

Query: 238  NGEKGMTGPRGNRGKSGINGVPG 260
             G +G+ GPRG  G+ G+ G+ G
Sbjct: 1563 QGLQGLPGPRGVVGRQGLEGIAG 1585



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 91/240 (37%), Gaps = 91/240 (37%)

Query: 112  PGLQGPIGQKGEIGAKGEM------GVKGERGEKGAPGVVGPPGPQGIPGD--------- 156
            PG QG IGQ+GE G +G+       G+KG+RG+ G  G  G  G +G+ G+         
Sbjct: 1319 PGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGV 1378

Query: 157  ------EGKRGPKGDMGYPGPQGIPGDEGK---------------------RGPKGDMGY 189
                  EGK G +G+ G  G +G  G +G+                     RG  G  G 
Sbjct: 1379 TGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGATGA 1438

Query: 190  PGRIGLDGRDGLPG---------------------------------------------- 203
            PGR+G  G  GL G                                              
Sbjct: 1439 PGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRG 1498

Query: 204  ---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               EPG  G PG+ G+ G+ GK G  G+ G PG  G  G KG  G  G +GK G  G PG
Sbjct: 1499 DRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPG 1558



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 89/244 (36%), Gaps = 94/244 (38%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 1301 PGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGE 1360

Query: 169  PGPQGI------------------------PGDEGKRGPKGDMGYPGRI----------- 193
             G +G+                         G++G+ G KG  GY G++           
Sbjct: 1361 KGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGP 1420

Query: 194  ----------------GLDGRDGLPGEPGLDGIPGRNGM--------------------- 216
                            G  GR G  GEPGL G  G  G+                     
Sbjct: 1421 PGTPGPKGSRGSLGATGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGK 1480

Query: 217  -------------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                                G PG  G PG++G+ G  G  G++G  G  G RG+ G  G
Sbjct: 1481 AEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKG 1540

Query: 258  VPGT 261
              G 
Sbjct: 1541 SKGA 1544



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 71/174 (40%), Gaps = 60/174 (34%)

Query: 144 VVGPPGPQG------------------------------------------IPGDEG--- 158
           ++GPPGP+G                                            GD G   
Sbjct: 766 LMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSP 825

Query: 159 ---KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPG 212
                G KGDMG PG  G PG  G+   KG  GYPG  G  G  G P   G PG  G PG
Sbjct: 826 GKAHDGAKGDMGLPGLSGNPGPPGR---KGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPG 882

Query: 213 RNGMDGI---PGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           R G+ G    PG  G  G  G+P   G  G++GE+G+ G  G RGK G+ G PG
Sbjct: 883 RQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPG 936



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 54/101 (53%), Gaps = 12/101 (11%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G+ G  G +GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 1643 QLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQG 1702

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLD 196
             RGP G MG     GP GI G  G  GPKGD G  G  GL 
Sbjct: 1703 PRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGLQ 1743



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 30/143 (20%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  GA GE G+ GE G KG  G      P G PG++G  G +G+         PG 
Sbjct: 1289 MGPKGPPGAVGEPGLPGEAGMKGDLG------PLGTPGEQGLIGQRGE---------PGL 1333

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GI 231
            EG  GP         +G DG  G  G+PG DG  G  G +G+ G+DG PG        G 
Sbjct: 1334 EGDSGP---------MGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGP 1384

Query: 232  PGTNGTNGEKGMTGPRGNRGKSG 254
             G +G  GEKG TG +G +G  G
Sbjct: 1385 EGKSGKQGEKGRTGAKGAKGYQG 1407



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 59/96 (61%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG  GP G KG+ GA+G  G +G+ G +G  G +GPPG  G+ G  G++G  G  G  G
Sbjct: 1060 PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDG 1119

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             +G PGD G+ GP G+ G+ G IGL G  G+ GE G
Sbjct: 1120 VKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKG 1155



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 51/115 (44%), Gaps = 30/115 (26%)

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMD 217
            GPKG  G  G  G+PG+ G    KGD+G           G PGE GL    G PG  G  
Sbjct: 1290 GPKGPPGAVGEPGLPGEAGM---KGDLGP---------LGTPGEQGLIGQRGEPGLEGDS 1337

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTG---------------PRGNRGKSGING 257
            G  G DGL G  G PG +G +GEKG  G                RG  GKSG  G
Sbjct: 1338 GPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQG 1392


>gi|115659|sp|P18503.1|CAS4_EPHMU RecName: Full=Short-chain collagen C4
 gi|9298|emb|CAA36831.1| short chain collagen (partial) (366 AA) [Ephydatia muelleri]
          Length = 366

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 92/197 (46%), Gaps = 38/197 (19%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +G+KG PG  G PG  G PG +G +G KGD G PGPQG  GD+   GPKGD GY G    
Sbjct: 69  KGDKGLPGNDGQPGAPGAPGYDGAKGDKGDTGAPGPQGPKGDQ---GPKGDQGYKGDA-- 123

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN----------------- 238
               GLPG+PG  G PG++G DG  G  G  G  G PG  G +                 
Sbjct: 124 ----GLPGQPGQTGAPGKDGQDGAKGDKGDQGPAGTPGAPGKDGAQGPAGPAGPAGPAGP 179

Query: 239 ----GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEH 294
               G +G  GP+G+ G  G  G PG+     Y R   ++ P  ET+        V S H
Sbjct: 180 VGPTGPQGPQGPKGDVGPQGPQGAPGSNGAVVYIRWGNNVCPAGETN--------VYSGH 231

Query: 295 IFSSSPIVVREGDNVRL 311
           I  SS      GD + L
Sbjct: 232 IVESSNANDANGDYLCL 248


>gi|224473809|gb|ACN49150.1| collagen type XI alpha 2 preprotein [Oryzias dancena]
          Length = 1842

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 93/207 (44%), Gaps = 57/207 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------GPQGIPGDEGKRGPKGD 165
           PG QG  G +G +G  GE G  G+ G  G PG  GPP      GP G  G++G  GP+G 
Sbjct: 723 PGTQGMPGPQGALGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTKGNQGPNGPQGA 782

Query: 166 MGYPGPQGIPGDEGKRGPK------------------------GDMGYPGRIGLD----- 196
           +GYPGP+GI G +G RG K                        G+ G PG  G D     
Sbjct: 783 IGYPGPRGIKGAQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEAGLPGPRGEDGPEGP 842

Query: 197 -GRDGLPGE---------------PGLDGIPGRN------GMDGIPGKDGLPGKDGIPGT 234
            GR G PGE               PGL G PGR       G  G PG +G  G  G+ G 
Sbjct: 843 KGRLGPPGEIGPLGTVGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGSNGEKGTRGVSGK 902

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G++G TGPRG RG  G  G PG 
Sbjct: 903 QGPRGQRGPTGPRGQRGPRGATGKPGA 929



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 90/176 (51%), Gaps = 33/176 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQG------------- 152
           PGL G  G +G+ G  G  G +GE GE+G  G VGP      PGP+G             
Sbjct: 633 PGLPGDKGHRGDTGPLGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGP 692

Query: 153 --IPGDEGKRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             + G++G  GPKG++G  G       QG PG +G  GP+G +G PG  G  G+ GLPG 
Sbjct: 693 PGVRGNDGPHGPKGNLGPQGEPGPPGMQGTPGTQGMPGPQGALGPPGEKGPTGKPGLPGM 752

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG DG PG       PGK+G  G  G  G NG  G  G  GPRG +G  GI G+ G
Sbjct: 753 PGADGPPGH------PGKEGPSGTKGNQGPNGPQGAIGYPGPRGIKGAQGIRGLKG 802



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 92/186 (49%), Gaps = 30/186 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G+ G  G KG+ G  G  G+ G++G +G  G +GPPG QG  G   D+G  GP+G  G P
Sbjct: 616 GMPGEPGTKGDRGFDGLPGLPGDKGHRGDTGPLGPPGSQGEDGERGDDGDVGPRGLPGEP 675

Query: 170 GPQG---------------IPGDEGKRGPKGDM------------GYPGRIGLDGRDGLP 202
           GP+G               + G++G  GPKG++            G PG  G+ G  G  
Sbjct: 676 GPRGLLGPKGPPGIAGPPGVRGNDGPHGPKGNLGPQGEPGPPGMQGTPGTQGMPGPQGAL 735

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           G PG  G  G+ G+ G+PG DG PG  G  G +GT G +G  GP+G  G  G  G+ G  
Sbjct: 736 GPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTKGNQGPNGPQGAIGYPGPRGIKGAQ 795

Query: 263 AICAYK 268
            I   K
Sbjct: 796 GIRGLK 801



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 88/194 (45%), Gaps = 45/194 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+G  G  G KGE G  G +G +G  GV+GPPG             +G+PG+ G  
Sbjct: 565 GRSGPLGSPGSPGLKGEGGDPGPQGPRGPQGVMGPPGKSGRRGRAGADGARGMPGEPGT- 623

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-- 218
             KGD G+ G  G+PGD+G RG  G +G PG  G DG  G  G+ G  G+PG  G  G  
Sbjct: 624 --KGDRGFDGLPGLPGDKGHRGDTGPLGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLL 681

Query: 219 -------------IPGKDGLPGK---------------DGIPGTNGTNGEKGMTGPRGNR 250
                        + G DG  G                 G PGT G  G +G  GP G +
Sbjct: 682 GPKGPPGIAGPPGVRGNDGPHGPKGNLGPQGEPGPPGMQGTPGTQGMPGPQGALGPPGEK 741

Query: 251 GKSGINGVPGTPAI 264
           G +G  G+PG P  
Sbjct: 742 GPTGKPGLPGMPGA 755



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/126 (44%), Positives = 66/126 (52%), Gaps = 9/126 (7%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG------RIGLDG 197
           + GPPGP G  G  G  G  G  G  G  G PG +G RGP+G MG PG      R G DG
Sbjct: 554 LKGPPGPMGFTGRSGPLGSPGSPGLKGEGGDPGPQGPRGPQGVMGPPGKSGRRGRAGADG 613

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G+PGEPG  G  G +G+ G+PG  G  G  G  G  G+ GE G    RG+ G  G  G
Sbjct: 614 ARGMPGEPGTKGDRGFDGLPGLPGDKGHRGDTGPLGPPGSQGEDGE---RGDDGDVGPRG 670

Query: 258 VPGTPA 263
           +PG P 
Sbjct: 671 LPGEPG 676



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 82/179 (45%), Gaps = 39/179 (21%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---------------GPPGPQG 152
            E   PG  GP G  GE G KG  G +GE+GE G PG                 G PGP G
Sbjct: 1277 EKGEPGESGPPGVVGEPGKKGPRGERGEKGEAGQPGTPGPAGGRGRPGDDGPKGNPGPVG 1336

Query: 153  IPGD---EGKRGPKGDMGYPGPQGIPGDEG------------------KRGPKGDMGYPG 191
             PGD    G+ GP+G  G  G +G  G++G                  KRGP G  G  G
Sbjct: 1337 FPGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSPGPPGENGPPGPLGKRGPAGTRGPEG 1396

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            R    G  G  G+PG  G PG+ G  G  G+ G PG +G+ G  G+ GE+G  GP G +
Sbjct: 1397 R---QGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGSPGPAGQK 1452



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 83/170 (48%), Gaps = 33/170 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------GPQGIPGDEGKRGP 162
            PG  G +G +G+ GAKGE G  GE+GE G+PG  G           GP G  G EG++G 
Sbjct: 1341 PGPTGEVGPRGQDGAKGERGEDGEQGEAGSPGPPGENGPPGPLGKRGPAGTRGPEGRQGE 1400

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------- 215
            KG  G PG  G P   GK GP G  G PG+ G +G  GLPG  G  G PG  G       
Sbjct: 1401 KGTKGDPGAVGPP---GKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGSPGPAGQKGPPGP 1457

Query: 216  --------MDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRG 251
                    + G PG  G  G  G+      PG  G  G++G+ GP+G+ G
Sbjct: 1458 VGPIGLPGLHGDPGAKGEKGHQGLIGLIGAPGEQGEKGDRGLPGPQGSTG 1507



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 87/216 (40%), Gaps = 48/216 (22%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------- 140
           L   +G    T    PPG QG  G++G+ G  G  G+ GE G +G               
Sbjct: 635 LPGDKGHRGDTGPLGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGPPG 694

Query: 141 ---------------------APGVVGPPGPQGIPGDEGKRGPKGDM---------GYPG 170
                                 PG+ G PG QG+PG +G  GP G+          G PG
Sbjct: 695 VRGNDGPHGPKGNLGPQGEPGPPGMQGTPGTQGMPGPQGALGPPGEKGPTGKPGLPGMPG 754

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPG 227
             G PG  GK GP G  G  G  G  G  G PG  G+    GI G  G  G  G+DG PG
Sbjct: 755 ADGPPGHPGKEGPSGTKGNQGPNGPQGAIGYPGPRGIKGAQGIRGLKGHKGEKGEDGFPG 814

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G  GE G+ GPRG  G  G  G  G P 
Sbjct: 815 IKGDFGVKGERGEAGLPGPRGEDGPEGPKGRLGPPG 850



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 60/123 (48%), Gaps = 18/123 (14%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            +GP G +G  G +GE G KG+ G  G PG  GP GPQG PG  G  G +G  G  G QG 
Sbjct: 1386 RGPAGTRGPEGRQGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGS 1445

Query: 175  PGDEGKR------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            PG  G++                  G KG+ G+ G IGL G  G  GE G  G+PG  G 
Sbjct: 1446 PGPAGQKGPPGPVGPIGLPGLHGDPGAKGEKGHQGLIGLIGAPGEQGEKGDRGLPGPQGS 1505

Query: 217  DGI 219
             G 
Sbjct: 1506 TGA 1508



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 66/138 (47%), Gaps = 36/138 (26%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------- 152
           GL+G  G+KGE    G KG+ GVKGERGE G PG  G  GP+G                 
Sbjct: 799 GLKGHKGEKGEDGFPGIKGDFGVKGERGEAGLPGPRGEDGPEGPKGRLGPPGEIGPLGTV 858

Query: 153 ----------IPGDEGKRGPKGDMGYPG------PQGIPGDEGKRGPKGDMGYPGRIGLD 196
                     +PG  G++GPKG +G+PG       +G  G  GK+GP+G  G  G  G  
Sbjct: 859 GEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGSNGEKGTRGVSGKQGPRGQRGPTGPRGQR 918

Query: 197 GRDGLPGEPGLDGIPGRN 214
           G  G  G+PG  G  G +
Sbjct: 919 GPRGATGKPGAKGTSGSD 936



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 50/96 (52%)

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           +GP G MG+ GR G  G  G PG  G  G PG  G  G  G  G PGK G  G  G +G 
Sbjct: 555 KGPPGPMGFTGRSGPLGSPGSPGLKGEGGDPGPQGPRGPQGVMGPPGKSGRRGRAGADGA 614

Query: 241 KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           +GM G  G +G  G +G+PG P    ++ ++  L P
Sbjct: 615 RGMPGEPGTKGDRGFDGLPGLPGDKGHRGDTGPLGP 650



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 79/218 (36%), Gaps = 75/218 (34%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------------- 162
            G+ G  G +G  G KG+ G +G PG  GP G QG+PG  G++G                 
Sbjct: 1192 GELGPRGQQGAFGAKGDEGTRGFPGAPGPIGLQGLPGPPGEKGETGDVGPLGPPGPPGPR 1251

Query: 163  --------------------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                                      KG+ G  GP G+ G+ GK+GP+G+ G  G  G  
Sbjct: 1252 GPAGPNGADGPQGPPGGLGNPGPLGEKGEPGESGPPGVVGEPGKKGPRGERGEKGEAGQP 1311

Query: 197  G---------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG----- 236
            G                 G PG  G  G PG  G  G  G+DG  G+ G  G  G     
Sbjct: 1312 GTPGPAGGRGRPGDDGPKGNPGPVGFPGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSP 1371

Query: 237  -------------TNGEKGMTGPRGNRGKSGINGVPGT 261
                           G  G  GP G +G+ G  G PG 
Sbjct: 1372 GPPGENGPPGPLGKRGPAGTRGPEGRQGEKGTKGDPGA 1409



 Score = 43.1 bits (100), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 3/67 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG +G  G  G  GE+G +G  G  GP G +G  G  G+RGP+G  G PG 
Sbjct: 873 PGRQGP---KGSLGFPGFPGSNGEKGTRGVSGKQGPRGQRGPTGPRGQRGPRGATGKPGA 929

Query: 172 QGIPGDE 178
           +G  G +
Sbjct: 930 KGTSGSD 936



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 86/257 (33%), Gaps = 98/257 (38%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------------ 157
            GP GQ+G  GAKG+ G +G  G  G  G+ G PGP G  G+                   
Sbjct: 1195 GPRGQQGAFGAKGDEGTRGFPGAPGPIGLQGLPGPPGEKGETGDVGPLGPPGPPGPRGPA 1254

Query: 158  ---------------------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                                       G+ GP G +G PG +   G  G+RG KG+ G P
Sbjct: 1255 GPNGADGPQGPPGGLGNPGPLGEKGEPGESGPPGVVGEPGKK---GPRGERGEKGEAGQP 1311

Query: 191  GRI---------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK------- 228
            G                 G  G  G PG+PG  G  G  G DG  G+ G  G+       
Sbjct: 1312 GTPGPAGGRGRPGDDGPKGNPGPVGFPGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSP 1371

Query: 229  -----------------------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                                   +G  G  GT G+ G  GP G  G  G  G PG P   
Sbjct: 1372 GPPGENGPPGPLGKRGPAGTRGPEGRQGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGT- 1430

Query: 266  AYKRESCSLLPNSETSQ 282
                E    LP S   Q
Sbjct: 1431 ----EGLRGLPGSVGEQ 1443



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 50/102 (49%), Gaps = 21/102 (20%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IPG 155
            PPG  GP+G +G+    G+ G +G RG  G+ G  G PGP G               + G
Sbjct: 1412 PPGKTGPVGPQGQ---PGKPGTEGLRGLPGSVGEQGSPGPAGQKGPPGPVGPIGLPGLHG 1468

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            D G +G KG  G  G  G PG++G+   KGD G PG  G  G
Sbjct: 1469 DPGAKGEKGHQGLIGLIGAPGEQGE---KGDRGLPGPQGSTG 1507


>gi|359150441|ref|ZP_09183279.1| Collagen triple helix repeat-containing protein [Streptomyces sp.
           S4]
          Length = 586

 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 77/175 (44%), Gaps = 27/175 (15%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---- 155
           QG   +     P G  GP G  GE G +G  G +G RG  G  G  G  G QG PG    
Sbjct: 132 QGPAGADGATGPAGADGPQGPAGEPGPEGPQGPEGPRGPAGEQGAPGEQGEQGEPGPAGD 191

Query: 156 -----------------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                                    G+RGP G+ G PGP G PG EG +GP GD G  G 
Sbjct: 192 PGEQGPPGPPGDPGPQGDPGPEGPAGERGPAGEQGEPGPAGDPGPEGLQGPAGDPGPEGA 251

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G  G  G PGEPG  G PG  G DG  G  G PG+ G  G  G  G KG  GP+
Sbjct: 252 QGPKGDKGDPGEPGPAGDPGTPGADGAQGSKGDPGEPGADGAEGPQGPKGDPGPQ 306



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 76/181 (41%), Gaps = 42/181 (23%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           QGP G  G  G  G  G +G  GE         PGP+G  G EG RGP G+ G PG QG 
Sbjct: 132 QGPAGADGATGPAGADGPQGPAGE---------PGPEGPQGPEGPRGPAGEQGAPGEQGE 182

Query: 175 PGD------------------------------EGKRGPKGDMGYPGRIGLDGRDGL--- 201
            G+                               G+RGP G+ G PG  G  G +GL   
Sbjct: 183 QGEPGPAGDPGEQGPPGPPGDPGPQGDPGPEGPAGERGPAGEQGEPGPAGDPGPEGLQGP 242

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+PG +G  G  G  G PG+ G  G  G PG +G  G KG  G  G  G  G  G  G 
Sbjct: 243 AGDPGPEGAQGPKGDKGDPGEPGPAGDPGTPGADGAQGSKGDPGEPGADGAEGPQGPKGD 302

Query: 262 P 262
           P
Sbjct: 303 P 303


>gi|297685189|ref|XP_002820179.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(XXVII) chain [Pongo
            abelii]
          Length = 1955

 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 93/167 (55%), Gaps = 16/167 (9%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G+PGP+G  G EG +G +G  G 
Sbjct: 1449 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGA 1508

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
            PGR G+ G  GLPG     G+ GR G++GI G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 1509 PGRRGVQGLQGLPGP---RGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 1565

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
             G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 1566 AGKRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1605



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 104/239 (43%), Gaps = 41/239 (17%)

Query: 43   DKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGF 102
            D+GD  +   P  P  E V     + +R +  +Q    H  P  W             G 
Sbjct: 1448 DRGDRGEPGDPGYPGQEGV-----QGLRGKPGQQGQPGHPGPRGW------------PGP 1490

Query: 103  CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------- 155
              S     P G QG  G  G  G +G  G+ G RG  G  G+ G  GP G+PG       
Sbjct: 1491 KGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQ 1550

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRDGL 201
                    D G  GP G  G PG  G+PG +G  G KG+ G PG++      G +GR GL
Sbjct: 1551 QGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGL 1610

Query: 202  P---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            P   GEPG  G PG +G  G PG  G+ G  G PG  G  G +G  GP G  GK GI G
Sbjct: 1611 PGNQGEPGSKGQPGDSGEMGFPGMAGIFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVG 1669



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 87/162 (53%), Gaps = 21/162 (12%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYPGPQGI 174
           K   GAKG+MG+ G  G  G PG  G    PGP G PG++G+ GP+G     GYPG QG+
Sbjct: 794 KAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGL 853

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G+PG  G+ G+ G PG 
Sbjct: 854 PGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGL 913

Query: 235 NGTNGEK---------------GMTGPRGNRGKSGINGVPGT 261
           +G  GE                G+ GP G  G  G+ G+ G+
Sbjct: 914 DGNPGELGLPGPPGVPGRVGDLGVLGPIGYPGPKGMKGLMGS 955



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 85/176 (48%), Gaps = 18/176 (10%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP G  G  G+KG  G KG++G+ GAPG  G  G QG+PG  
Sbjct: 1465 GVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPR 1524

Query: 158  GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G +G  G  GP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 1525 GVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1584

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G  G+PG+    G PGK G  G+ G+PG  G  G KG  G  G  G  G+ G+
Sbjct: 1585 GFKGESGLPGQL---GPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGI 1637



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG +GPPG         KRG +G  G 
Sbjct: 1560 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGRTGL 1610

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  G+ G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 1611 PGNQGEPGSKGQPGDSGEMGFPGMAGIFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGP 1670

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1671 LGILGPSGLPGPKGDKGSRGDWG 1693



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 90/178 (50%), Gaps = 33/178 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
            G +G  G  G  G +G  G++G+ G++G PG  GP   PGP+G  G EG +G +G  G P
Sbjct: 1450 GDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAP 1509

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------------------- 204
            G +G+ G +G  GP+G +G  G  G+ G DGLPG                          
Sbjct: 1510 GRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKR 1569

Query: 205  --PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              PG+ G+PG  G  G  G+ GLPG+ G PG  GT G  G+    GN+G+ G  G PG
Sbjct: 1570 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLP---GNQGEPGSKGQPG 1624



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 42/191 (21%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KG +G+ GE G+KG++GE+G PGV       G PG +G +G +G  G+PG
Sbjct: 940  PIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGV------SGDPGFQGDKGSQGLPGFPG 993

Query: 171  PQGIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             +G PG  GK G KG               D+G PG    +G +G+ G+PG  G+PG  G
Sbjct: 994  ARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGD---NGPEGMKGKPGARGLPGPRG 1050

Query: 216  ------------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                              ++G PG+ G PG+ G+ G  G  G+ G  GP G +G  G  G
Sbjct: 1051 QLGPEGDEGPTGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIG 1110

Query: 258  VPGTPAICAYK 268
            + G P I   K
Sbjct: 1111 LVGEPGIVGEK 1121



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 76/144 (52%), Gaps = 12/144 (8%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++G
Sbjct: 784 QKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQG 834

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 835 QPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 894

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G RG  G++G PG
Sbjct: 895 KMGMPGFPGVFGERGPPGLDGNPG 918



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 91/167 (54%), Gaps = 18/167 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 812 PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGL 871

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMD-------- 217
           PG  G+PG +G+RG  G  G  G++G+ G  G+ GE   PGLDG PG  G+         
Sbjct: 872 PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGR 931

Query: 218 ----GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G+ G  G PG  G+ G  G+ GE G+ G +G +G  G++G PG
Sbjct: 932 VGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 978



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 83/187 (44%), Gaps = 42/187 (22%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPKG-------- 164
            GP G +G IG  G  G+ G  GE+G PGV G  G  G+PG     G+RGP G        
Sbjct: 861  GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGEL 920

Query: 165  -------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                         D+G  GP G PG +G +G  G +G PG  G  G  G+P   G+PG  
Sbjct: 921  GLPGPPGVPGRVGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQ 980

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKS 253
            G  G  G+ G PG  G PG  G  G  G+                G  G  GP G +GK 
Sbjct: 981  GDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 1040

Query: 254  GINGVPG 260
            G  G+PG
Sbjct: 1041 GARGLPG 1047



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 85/190 (44%), Gaps = 54/190 (28%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---------------------------------- 138
            G +GP G  GE G++G  GV GERG                                   
Sbjct: 1176 GPRGPDGPAGEQGSRGLKGVAGERGHLGLRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPV 1235

Query: 139  --------KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                    KG PG VG P   G+PG+ G +G  G +G PG QG+ G  G+ G +GD G  
Sbjct: 1236 GPPGETGPKGPPGAVGEP---GLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGP- 1291

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMT 244
              +G DG  G  G+PG DG  G  G +G+ G+DG PG        G  G +G  GEKG T
Sbjct: 1292 --MGPDGLKGDRGDPGTDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRT 1349

Query: 245  GPRGNRGKSG 254
            G +G +G  G
Sbjct: 1350 GAKGAKGYQG 1359



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 90/240 (37%), Gaps = 82/240 (34%)

Query: 100  QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------- 146
            QG      E   PGL+G   P+G  G  G +G+ G  GE GEKG  G++G          
Sbjct: 1274 QGLIGQRGE---PGLEGDSGPMGPDGLKGDRGDPGTDGEHGEKGQEGLMGEDGPPGPPGV 1330

Query: 147  -----PPGPQGIPGDEGKRGPKGDMGYPG---------------------------PQGI 174
                 P G  G  G++G+ G KG  GY G                           P G 
Sbjct: 1331 TGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGA 1390

Query: 175  PGDEGKRGPKGDMGYPGRIGL---------------DGRDGLP----------------- 202
            PG  G +G  G  GY G  G+                G DG                   
Sbjct: 1391 PGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRG 1450

Query: 203  --GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              GEPG  G PG+ G+ G+ GK G  G+ G PG  G  G KG  G  G +GK G  G PG
Sbjct: 1451 DRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPG 1510



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G KGDMG PG   L G  G PG  G  G PG  G    PG+ G PG +G PG  G  G +
Sbjct: 798 GAKGDMGLPG---LSGNPGPPGRKGHKGYPGPAGH---PGEQGQPGPEGSPGAKGYPGRQ 851

Query: 242 GMTGPRGNRGKSGINGVPGTPAI 264
           G+ GP G+ G  G  G  G P +
Sbjct: 852 GLPGPVGDPGPKGSRGYIGLPGL 874



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 54/101 (53%), Gaps = 12/101 (11%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G+ G  G +GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 1595 QLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGIFGPKGPPGDIGFKGIQG 1654

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLD 196
             RGP G MG     GP GI G  G  GPKGD G  G  GL 
Sbjct: 1655 PRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGLQ 1695



 Score = 46.2 bits (108), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 58/96 (60%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG  GP G KG+ GA+G  G +G+ G +G  G  GPPG  G+ G  G++G  G  G  G
Sbjct: 1027 PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPTGPPGAPGLEGQPGRKGFPGRPGLDG 1086

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             +G PGD G+ GP G+ G+ G IGL G  G+ GE G
Sbjct: 1087 VKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKG 1122



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 83/238 (34%), Gaps = 90/238 (37%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------GPQGIPGDEGKR---- 160
            L+G  G+KG  G  G  GVKGE G+ G PG VG           G  GI G++G R    
Sbjct: 1069 LEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKGDRGMMG 1128

Query: 161  -----------------------------------------GPKGDMGYPGPQGIPGDEG 179
                                                     G KG  G  GP G  G++G
Sbjct: 1129 PPGVPGPKGSMGHPGMPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQG 1188

Query: 180  KRGPKGDMGYPGRIGL------------------------------------DGRDGLPG 203
             RG KG  G  G +GL                                     G  G PG
Sbjct: 1189 SRGLKGVAGERGHLGLRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPVGPPGETGPKGPPG 1248

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  G+PG  GM G  G  G PG+ G+ G  G  G +G +GP G  G  G  G PGT
Sbjct: 1249 AVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGT 1306


>gi|62088872|dbj|BAD92883.1| COL4A1 protein variant [Homo sapiens]
          Length = 847

 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 37/187 (19%)

Query: 112 PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           PG QG  G  G+ GAKGE        +G+ G RGEKG  G+ G       PG  G++G K
Sbjct: 209 PGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAG------FPGSPGEKGEK 262

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
           G +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIPG  G  G+PG  
Sbjct: 263 GSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTP 319

Query: 222 -------KDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRGKSGINGVPGTPA 263
                  + G PG DGIPG+ G  GE G+            G +G++G+ G  G+ G+P 
Sbjct: 320 GPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPG 379

Query: 264 ICAYKRE 270
           I   K E
Sbjct: 380 IPGSKGE 386



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 99/196 (50%), Gaps = 40/196 (20%)

Query: 93  RIPLVAM-QGFCNSTKEYCPPGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP 148
           R P  A  QG    T +   PGL   QG  G  G  G+KGEMGV G  G+ G+PG VG P
Sbjct: 18  RFPRAARGQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAP 77

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---------------- 192
           G   +PG+      KGD G+PG  G  GD G +G KGD+G PG+                
Sbjct: 78  G---LPGE------KGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQK 128

Query: 193 --------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                   IG  G  G  G+PG  G+PG++G  G PG+   PG  G PG +GT G  G+ 
Sbjct: 129 GDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLP 185

Query: 245 GPRGNRGKSGINGVPG 260
           GP+G+ G  G+ G PG
Sbjct: 186 GPKGSVGGMGLPGTPG 201



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 82/153 (53%), Gaps = 29/153 (18%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD   PG  G PG  
Sbjct: 126 GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD---PGISGTPGAP 182

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G  GPKG +G     G+    GLPG PG  G+PG      IPG  G PG   +PG  G  
Sbjct: 183 GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGSPG---LPGDKGAK 224

Query: 239 GEKGMTGP--------RGNRGKSGINGVPGTPA 263
           GEKG  GP        RG +G  GI G PG+P 
Sbjct: 225 GEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPG 257



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 91/172 (52%), Gaps = 28/172 (16%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
           GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 138 GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 197

Query: 167 ---------GYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP--- 211
                    G PGPQ   G+PGD+G +G KG  G PG IG+ G  G  G+ G+ G P   
Sbjct: 198 GTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSP 256

Query: 212 ---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  GIPG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG
Sbjct: 257 GEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 308



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 91/177 (51%), Gaps = 28/177 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGP---PGPQ---GIPGDEGK 159
           PG  GP G  G  G  G  G+ G +G        G PG  G    PGPQ   G+PGD+G 
Sbjct: 164 PGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGA 223

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGR 213
           +G KG  G PG  GIPG  G++G +G  G+PG  G  G        G+PG PGL G PG 
Sbjct: 224 KGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGS 282

Query: 214 NGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGT 261
            G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G +G+PG+
Sbjct: 283 VGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGS 339



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 82/167 (49%), Gaps = 30/167 (17%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           +G  G  G+ G+ G  G++GAPG+ G PG +G   + G  G  G  G PGP G PG  G+
Sbjct: 26  QGLPGITGQSGLPGLPGQQGAPGIPGFPGSKG---EMGVMGTPGQPGSPGPVGAPGLPGE 82

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD---------------------- 217
              KGD G+PG  G  G  GL G+ G  G+PG+ G MD                      
Sbjct: 83  ---KGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGP 139

Query: 218 -GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 140 IGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 186



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 74/143 (51%), Gaps = 16/143 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------PK 163
           G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG++G +G          K
Sbjct: 251 GFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVK 310

Query: 164 GDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG   P G     G++G  G  G PG  G  G  GLPG  G  G PG  G  G  
Sbjct: 311 GEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPGR-GFPGFPGAKGDKGSK 366

Query: 221 GKDGLPGKDGIPGTNGTNGEKGM 243
           G+ G PG  G PG  G+ GE+G 
Sbjct: 367 GEVGFPGLAGSPGIPGSKGEQGF 389



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 85/203 (41%), Gaps = 66/203 (32%)

Query: 112 PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP GQKGE G+    G     GE+GE G PG   P    G PG +G +G KG++G+
Sbjct: 319 PGPTGPAGQKGEPGSDGIPGSA---GEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGF 371

Query: 169 P---GPQGIPGDEGKR-----------------------GPKGDM--------------- 187
           P   G  GIPG +G++                       GPKGD                
Sbjct: 372 PGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPM 431

Query: 188 ---------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                          G PG  G  G  G  G+PG  G+PG  G  GI G  G  G  G+P
Sbjct: 432 GPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVP 491

Query: 233 GTNGTNGEKGMTGPRGNRGKSGI 255
           G  G  G  G+ G +G++G  G+
Sbjct: 492 GFQGPKGLPGLQGIKGDQGDHGV 514


>gi|167534461|ref|XP_001748906.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772586|gb|EDQ86236.1| predicted protein [Monosiga brevicollis MX1]
          Length = 2847

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 94/195 (48%), Gaps = 27/195 (13%)

Query: 91   YSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGP 147
              R       G      +  P GL G  G+ G+ GAKG   ++G KG  G +GAPG  GP
Sbjct: 1920 AGRKGAKGADGARGPAGDQGPKGLDGRDGRDGDAGAKGTPGDVGPKGAEGVQGAPGRQGP 1979

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIP---------GDEGKRGPKGDMGYPGRIGLDGR 198
             G  G  GD+G R   GD G PG  G+P         G +G  G  G+ G  GR G DGR
Sbjct: 1980 KGQAGRDGDDGAR---GDKGMPGETGLPGVDGDAGVDGRDGTSGAPGEKGQKGRAGRDGR 2036

Query: 199  DGL------PGEPGLDGIPGRNGMDGIPG---KDGLPGK---DGIPGTNGTNGEKGMTGP 246
            DG        GEPGL+G  G NG DG PG    DG PG     G PG +G  G KGM GP
Sbjct: 2037 DGFKGMPGRKGEPGLNGDMGDNGADGAPGDDASDGAPGSRGPKGAPGRDGGMGAKGMPGP 2096

Query: 247  RGNRGKSGINGVPGT 261
             G RG  G  G PG 
Sbjct: 2097 AGERGDVGPKGQPGA 2111



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/155 (46%), Positives = 83/155 (53%), Gaps = 9/155 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGDM 166
           G  GP+G  GE G  G  GV G  G KG  G+ G PGP G  G++G       RGPKG  
Sbjct: 96  GSPGPVGAPGEDGIPGRDGVDGTDGPKGIKGIQGMPGPMGPRGEDGYDGTDGPRGPKGFK 155

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G+PG +G  G +G RG  GD G     G DG DG PG PG  G  GR G DG+ G+DG+P
Sbjct: 156 GFPGAKGRSGQDGARGRPGDQGP---AGFDGTDGAPGNPGAQGPKGRAGTDGLDGRDGIP 212

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G PG  G  G  G TG  G  G  G +G  GT
Sbjct: 213 GTPGTPGARGDKGRTGETGLPGPNGDDGFHGTDGT 247



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/167 (44%), Positives = 85/167 (50%), Gaps = 18/167 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G KG+ G  G  G+ G+ GEKGA G +GP G  G  G+ G  GP G  G  G 
Sbjct: 2307 PGAPGANGNKGQPGDVGTPGLDGDDGEKGAKGAMGPDGDNGPRGETGLPGPTGRPGLDGT 2366

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------ 219
             G+ GD G  G KGD G  GR G  G DG PG PG +G  GR G DG+            
Sbjct: 2367 DGVDGDRGLPGAKGDAGLTGRPGRPGPDGTPGTPGRNGFKGRAGEDGLDGDNGDVGFPGF 2426

Query: 220  ------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   G+DG+PG DG  G NG  G KG TGP G  G +G  G PG
Sbjct: 2427 TGAKGNAGRDGVPGADGADGDNGARGAKGRTGPVGPDGDTGAPGAPG 2473



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 84/151 (55%), Gaps = 9/151 (5%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQGI- 174
            G KGE G  GE GV G  G  G  G VGP    GP+G  GD G  G  GD G PG  GI 
Sbjct: 1765 GIKGEAGEPGENGVPGRPGSPGKGGSVGPDGDAGPRGDKGDSGLDGRPGDRGRPGETGIG 1824

Query: 175  --PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
               G +G+ G KGD G PGR G    DG PG PG DG PGR G+ G+ G+ G+ G  G P
Sbjct: 1825 GVSGTDGREGAKGDTGMPGRPG---DDGTPGTPGADGRPGRPGVPGVDGRKGMDGVPGQP 1881

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G+ G  GP+G +G +G +G  GTP 
Sbjct: 1882 GAKGAEGDAGSPGPQGPKGVAGRDGEDGTPG 1912



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 87/165 (52%), Gaps = 18/165 (10%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G +G +G KG+ GAKGE G +G  GE G PG  G PG  G  G +G  G +GD G PG
Sbjct: 2096 PAGERGDVGPKGQPGAKGEQGDQGNTGETGLPGDRGFPGRDGTAGLDGTDGARGDKGMPG 2155

Query: 171  PQ------------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                                G PG+ G  GP GD G+ G  G  GRDG  G+ G  G  G
Sbjct: 2156 TDGPDGRDGRDGRDGAKGDTGSPGEVGLPGPAGDDGFTGTDGAPGRDGRDGDKGAIGNDG 2215

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             +G  G PG+ GLPG  G+ GT+G NG  G  GPRG++G  G +G
Sbjct: 2216 EDGDSGAPGETGLPGPRGLDGTDGMNGRDGTAGPRGDKGMPGRDG 2260



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/190 (41%), Positives = 91/190 (47%), Gaps = 12/190 (6%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQGIP 154
           GF  +      PG QGP G+ G  G  G  G+ G       RG+KG  G  G PGP G  
Sbjct: 180 GFDGTDGAPGNPGAQGPKGRAGTDGLDGRDGIPGTPGTPGARGDKGRTGETGLPGPNGDD 239

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G  G  G  G  GP+G  GD+G  G  G+ G PG  G DG DG  G PG  G  GR 
Sbjct: 240 GFHGTDGTNGRDGAAGPKGQRGDDGNTGRAGETGLPGPAGSDGLDGTDGAPGPRGDKGRT 299

Query: 215 GMDGIPGKD---GLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G DG  G+    GLPG DG  G +GT+   G +G  G RG  G+ G  G PGTP I    
Sbjct: 300 GPDGDKGRQGETGLPGPDGDSGRDGTDGLPGARGDDGSRGRPGRPGPAGRPGTPGIKGQP 359

Query: 269 RESCSLLPNS 278
            E     PN 
Sbjct: 360 GERGDAGPNG 369



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 86/171 (50%), Gaps = 15/171 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +GP G +G  G  G  G  G+ G KG PG VGP G +G+ G  G++GPKG  G  G  
Sbjct: 1930 GARGPAGDQGPKGLDGRDGRDGDAGAKGTPGDVGPKGAEGVQGAPGRQGPKGQAGRDGDD 1989

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------GIPGKDGLP 226
            G  GD+G  G  G  G  G  G+DGRDG  G PG  G  GR G D      G+PG+ G P
Sbjct: 1990 GARGDKGMPGETGLPGVDGDAGVDGRDGTSGAPGEKGQKGRAGRDGRDGFKGMPGRKGEP 2049

Query: 227  ---------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                     G DG PG + ++G  G  GP+G  G+ G  G  G P     +
Sbjct: 2050 GLNGDMGDNGADGAPGDDASDGAPGSRGPKGAPGRDGGMGAKGMPGPAGER 2100



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/160 (46%), Positives = 84/160 (52%), Gaps = 18/160 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G KG  G  G MG +GE G  G  G  GP G +G PG +G+ G  G  G PG Q
Sbjct: 117 GTDGPKGIKGIQGMPGPMGPRGEDGYDGTDGPRGPKGFKGFPGAKGRSGQDGARGRPGDQ 176

Query: 173 G---------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G          PG+ G +GPKG  G     GLDGRDG+PG P   G PG  G  G  G+ 
Sbjct: 177 GPAGFDGTDGAPGNPGAQGPKGRAGT---DGLDGRDGIPGTP---GTPGARGDKGRTGET 230

Query: 224 GLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           GLP   G DG  GT+GTNG  G  GP+G RG  G  G  G
Sbjct: 231 GLPGPNGDDGFHGTDGTNGRDGAAGPKGQRGDDGNTGRAG 270



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 81/149 (54%), Gaps = 9/149 (6%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
             G KG+ G KG+ G  G +GE G PG  G PG  G PG  G  GP GD G   P+G  GD
Sbjct: 1749 TGDKGDKGFKGQPGRPGIKGEAGEPGENGVPGRPGSPGKGGSVGPDGDAG---PRGDKGD 1805

Query: 178  EGKRGPKGDMGYPGRIGL------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G  G  GD G PG  G+      DGR+G  G+ G+ G PG +G  G PG DG PG+ G+
Sbjct: 1806 SGLDGRPGDRGRPGETGIGGVSGTDGREGAKGDTGMPGRPGDDGTPGTPGADGRPGRPGV 1865

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG +G  G  G+ G  G +G  G  G PG
Sbjct: 1866 PGVDGRKGMDGVPGQPGAKGAEGDAGSPG 1894



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 88/168 (52%), Gaps = 9/168 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G  G  G  G +G  GV G  GE G PG  G PGP G  G +G  G +G  G  GP
Sbjct: 1881 PGAKGAEGDAGSPGPQGPKGVAGRDGEDGTPGRDGAPGPAGRKGAKGADGARGPAGDQGP 1940

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---------IPGK 222
            +G+ G +G+ G  G  G PG +G  G +G+ G PG  G  G+ G DG         +PG+
Sbjct: 1941 KGLDGRDGRDGDAGAKGTPGDVGPKGAEGVQGAPGRQGPKGQAGRDGDDGARGDKGMPGE 2000

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             GLPG DG  G +G +G  G  G +G +G++G +G  G   +   K E
Sbjct: 2001 TGLPGVDGDAGVDGRDGTSGAPGEKGQKGRAGRDGRDGFKGMPGRKGE 2048



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 89/184 (48%), Gaps = 33/184 (17%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  G  G  G  GA+G+ G  G  G  GA G  G PG +G  G +G  G  GDMG+PG
Sbjct: 1007 PKGKPGDDGTDGLNGARGDAGAPGRPGTDGARGDAGAPGARGFDGSDGADGDNGDMGFPG 1066

Query: 171  ---------PQGIPG------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
                     P G PG             +G  GP+GD G  G  G  G DG+PG  G DG
Sbjct: 1067 FRGPKGNAGPMGAPGLNGRDGTDGSTGRKGSAGPRGDAGRQGPKGQSGLDGVPGTDGDDG 1126

Query: 210  IPGRNGMDGIPGKDGLPGK------------DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             PG NG DG PG+ G  G+            DG+PG +GT+G  G  GP G++G  G  G
Sbjct: 1127 APGDNGSDGRPGRPGPQGEKGRRGPVGDDGTDGVPGRDGTDGVPGPRGPDGDKGAPGRPG 1186

Query: 258  VPGT 261
            +PG 
Sbjct: 1187 LPGA 1190



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 97/204 (47%), Gaps = 17/204 (8%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G  GP GQ+G+    G  GE G+ G  G  G  G  G PGP+G   D+G+ GP GD G  
Sbjct: 252 GAAGPKGQRGDDGNTGRAGETGLPGPAGSDGLDGTDGAPGPRG---DKGRTGPDGDKGRQ 308

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP--- 226
           G  G+PG +G  G  G  G PG  G DG  G PG PG  G PG  G+ G PG+ G     
Sbjct: 309 GETGLPGPDGDSGRDGTDGLPGARGDDGSRGRPGRPGPAGRPGTPGIKGQPGERGDAGPN 368

Query: 227 GKDGIPGTNGTNGEKGMTGP------RGNRGKSGINGVPGTPAICAYKRESCSLLPNSET 280
           G+DGI G  G  GE+G TG        G  G+ G +G PG   +   K E     P    
Sbjct: 369 GRDGIDGGVGDKGERGDTGGPGVPGLDGTVGRKGYDGRPGETGLPGVKGEPGFPGPQGPK 428

Query: 281 SQLLIP--PTIVGSEHIFSSSPIV 302
               +P  P   G E I S+S + 
Sbjct: 429 GDQGVPGLPGPEGGECIVSASDVA 452



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 84/176 (47%), Gaps = 9/176 (5%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------VKGERGEKGAPGVVGP---P 148
               G   +  +   PG  G  G +G+ GA G  G        G+ G+ G PG  GP    
Sbjct: 1015 GTDGLNGARGDAGAPGRPGTDGARGDAGAPGARGFDGSDGADGDNGDMGFPGFRGPKGNA 1074

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            GP G PG  G+ G  G  G  G  G  GD G++GPKG  G  G  G DG DG PG+ G D
Sbjct: 1075 GPMGAPGLNGRDGTDGSTGRKGSAGPRGDAGRQGPKGQSGLDGVPGTDGDDGAPGDNGSD 1134

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G PGR G  G  G+ G  G DG  G  G +G  G+ GPRG  G  G  G PG P  
Sbjct: 1135 GRPGRPGPQGEKGRRGPVGDDGTDGVPGRDGTDGVPGPRGPDGDKGAPGRPGLPGA 1190



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 90/188 (47%), Gaps = 21/188 (11%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++G      E   PG  G  G+ G +G  G+ G    RG+KG  G+ G PG +G PG+ 
Sbjct: 1765 GIKGEAGEPGENGVPGRPGSPGKGGSVGPDGDAG---PRGDKGDSGLDGRPGDRGRPGET 1821

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD------GRDGLPGEPGLDGIP 211
            G              G+ G +G+ G KGD G PGR G D      G DG PG PG+ G+ 
Sbjct: 1822 GI------------GGVSGTDGREGAKGDTGMPGRPGDDGTPGTPGADGRPGRPGVPGVD 1869

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            GR GMDG+PG+ G  G +G  G+ G  G KG+ G  G  G  G +G PG       K   
Sbjct: 1870 GRKGMDGVPGQPGAKGAEGDAGSPGPQGPKGVAGRDGEDGTPGRDGAPGPAGRKGAKGAD 1929

Query: 272  CSLLPNSE 279
             +  P  +
Sbjct: 1930 GARGPAGD 1937



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 92/174 (52%), Gaps = 11/174 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+ G  G+KG  G  G+ G KG  G+ G+PG   P GP+G+ G +G+ G  G  G PGP
Sbjct: 1863 PGVPGVDGRKGMDGVPGQPGAKGAEGDAGSPG---PQGPKGVAGRDGEDGTPGRDGAPGP 1919

Query: 172  ---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
               +G  G +G RGP GD G     GLDGRDG  G+ G  G PG  G  G  G  G PG+
Sbjct: 1920 AGRKGAKGADGARGPAGDQGP---KGLDGRDGRDGDAGAKGTPGDVGPKGAEGVQGAPGR 1976

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
             G  G  G +G+ G  G +G  G++G+ GV G   +    R+  S  P  +  +
Sbjct: 1977 QGPKGQAGRDGDDGARGDKGMPGETGLPGVDGDAGVDG--RDGTSGAPGEKGQK 2028



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 81/145 (55%), Gaps = 6/145 (4%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+ GE G  G  G  G +G+ GAPG  G  G +G PGD G  G  GD G  G +G  G +
Sbjct: 2284 GEAGEKGMPGRDGRDGNKGQPGAPGAPGANGNKGQPGDVGTPGLDGDDGEKGAKGAMGPD 2343

Query: 179  GKRGPKGDMGYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            G  GP+G+ G PG   R GLDG DG+ G+ GL G  G  G+ G PG+   PG DG PGT 
Sbjct: 2344 GDNGPRGETGLPGPTGRPGLDGTDGVDGDRGLPGAKGDAGLTGRPGR---PGPDGTPGTP 2400

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPG 260
            G NG KG  G  G  G +G  G PG
Sbjct: 2401 GRNGFKGRAGEDGLDGDNGDVGFPG 2425



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 92/202 (45%), Gaps = 30/202 (14%)

Query: 92   SRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVGPP 148
             R       GF         PGL G +G  G  GA G+    G  G RG KGAPG  G  
Sbjct: 2029 GRAGRDGRDGFKGMPGRKGEPGLNGDMGDNGADGAPGDDASDGAPGSRGPKGAPGRDGGM 2088

Query: 149  GPQGIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLP 202
            G +G+PG  G+RG   PKG  G  G QG  G+ G+ G  GD G+PGR    GLDG DG  
Sbjct: 2089 GAKGMPGPAGERGDVGPKGQPGAKGEQGDQGNTGETGLPGDRGFPGRDGTAGLDGTDGAR 2148

Query: 203  GEPGLDGI---------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G+ G+ G                      PG  G+ G  G DG  G DG PG +G +G+K
Sbjct: 2149 GDKGMPGTDGPDGRDGRDGRDGAKGDTGSPGEVGLPGPAGDDGFTGTDGAPGRDGRDGDK 2208

Query: 242  GMTGPRGNRGKSGINGVPGTPA 263
            G  G  G  G SG  G  G P 
Sbjct: 2209 GAIGNDGEDGDSGAPGETGLPG 2230



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 9/169 (5%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG----- 152
              +G   S     P G+ G  G+ G  G  G  G  G +G KGA G  GP G QG     
Sbjct: 1885 GAEGDAGSPGPQGPKGVAGRDGEDGTPGRDGAPGPAGRKGAKGADGARGPAGDQGPKGLD 1944

Query: 153  ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                  GD G +G  GD+G  G +G+ G  G++GPKG  G  G  G  G  G+PGE GL 
Sbjct: 1945 GRDGRDGDAGAKGTPGDVGPKGAEGVQGAPGRQGPKGQAGRDGDDGARGDKGMPGETGLP 2004

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G+ G  G+DG  G  G PG+ G  G  G +G  G  G  G +G+ G+NG
Sbjct: 2005 GVDGDAGVDGRDGTSGAPGEKGQKGRAGRDGRDGFKGMPGRKGEPGLNG 2053



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 87/168 (51%), Gaps = 19/168 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGYP 169
            G  GP G+ GE GA G  G  G  G+KG  GV G  G +G+PG  G+    GP+GD G  
Sbjct: 2566 GSTGPQGEAGEDGADGRDGAMGFTGDKGNSGVPGRDGAKGMPGSRGETGLPGPRGDAGPQ 2625

Query: 170  GPQGIPGDEGKR------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            GP+G  GD+G +            G +GDMG  G  G DGRDG+ G  G  G PG +G  
Sbjct: 2626 GPRGRDGDKGAKGLTGRMGDVGLAGQEGDMGELGFTGRDGRDGVKGSAGRPGRPGDDGHK 2685

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G  G  G PG+       G +G KG+ G  G +G+ GI G  G P +C
Sbjct: 2686 GFRGDAGAPGRL----VAGDSGFKGLLGEAGVKGQPGIKGSAGAPGVC 2729



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 87/191 (45%), Gaps = 45/191 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G  G  GAKG  G  G  G+ GAPG  G  G QG PGD+G+ G  G  G  G 
Sbjct: 2439 PGADGADGDNGARGAKGRTGPVGPDGDTGAPGAPGFDGTQGAPGDKGRSGAPGFKGRSGV 2498

Query: 172  QGIPGDEGKRGPKGD---------------------MGYPGRIGLDGRDGLPGEPGLDGI 210
             GI G+ G+ G  G+                      G  GR G DGRDG PG+ G+DG 
Sbjct: 2499 AGIKGEMGRPGEPGEPGEDGRDGTDGRDGTDGGRGDKGQKGRSGRDGRDGAPGDDGIDGR 2558

Query: 211  PGRNGM------------DGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGP 246
            PGR G             DG  G+D            G+PG+DG  G  G+ GE G+ GP
Sbjct: 2559 PGRKGQRGSTGPQGEAGEDGADGRDGAMGFTGDKGNSGVPGRDGAKGMPGSRGETGLPGP 2618

Query: 247  RGNRGKSGING 257
            RG+ G  G  G
Sbjct: 2619 RGDAGPQGPRG 2629



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 85/173 (49%), Gaps = 24/173 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGDM 166
            G  G  G+ G  G KG +G  GE G+ GAPG  G PGP+G+ G +G        GP+GD 
Sbjct: 2194 GTDGAPGRDGRDGDKGAIGNDGEDGDSGAPGETGLPGPRGLDGTDGMNGRDGTAGPRGDK 2253

Query: 167  GYPGPQGIPG---------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G PG  G  G                +G  G  G+ G PGR   DGRDG  G+PG  G P
Sbjct: 2254 GMPGRDGSVGRKGQPGPQGPQGPRGRDGIDGEAGEKGMPGR---DGRDGNKGQPGAPGAP 2310

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G NG  G PG  G PG DG  G  G  G  G  G  G RG++G+ G  G P +
Sbjct: 2311 GANGNKGQPGDVGTPGLDGDDGEKGAKGAMGPDGDNGPRGETGLPGPTGRPGL 2363



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 87/175 (49%), Gaps = 12/175 (6%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---------PGDEGKRG 161
            P G  GP G KG+ G  G  G +G  GE G  GV G  G +G          PGD+G  G
Sbjct: 1793 PDGDAGPRGDKGDSGLDGRPGDRGRPGETGIGGVSGTDGREGAKGDTGMPGRPGDDGTPG 1852

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
              G  G PG  G+PG +G++G  G  G PG  G +G  G PG  G  G+ GR+G DG PG
Sbjct: 1853 TPGADGRPGRPGVPGVDGRKGMDGVPGQPGAKGAEGDAGSPGPQGPKGVAGRDGEDGTPG 1912

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            +DG PG  G  G  G +G +   GP G++G  G++G  G       K     + P
Sbjct: 1913 RDGAPGPAGRKGAKGADGAR---GPAGDQGPKGLDGRDGRDGDAGAKGTPGDVGP 1964



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 90/187 (48%), Gaps = 23/187 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----- 167
           G +GP G KG  GAKG  G  G RG  G  G  G  G  G PG+ G +GPKG  G     
Sbjct: 147 GPRGPKGFKGFPGAKGRSGQDGARGRPGDQGPAGFDGTDGAPGNPGAQGPKGRAGTDGLD 206

Query: 168 ----YPGPQGIPGDEGKRG---------PKGDMGYPGRIGLDGRDGLPG---EPGLDGIP 211
                PG  G PG  G +G         P GD G+ G  G +GRDG  G   + G DG  
Sbjct: 207 GRDGIPGTPGTPGARGDKGRTGETGLPGPNGDDGFHGTDGTNGRDGAAGPKGQRGDDGNT 266

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           GR G  G+PG  G  G DG  G  G  G+KG TGP G++G+ G  G+PG        R+ 
Sbjct: 267 GRAGETGLPGPAGSDGLDGTDGAPGPRGDKGRTGPDGDKGRQGETGLPGPDGDSG--RDG 324

Query: 272 CSLLPNS 278
              LP +
Sbjct: 325 TDGLPGA 331



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 87  WLNAYSRIPLV----AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP 142
            L+    IP        +G    T E   PG  G  G  G  G  G  G  G +G++G  
Sbjct: 204 GLDGRDGIPGTPGTPGARGDKGRTGETGLPGPNGDDGFHGTDGTNGRDGAAGPKGQRGDD 263

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G  G  G  G+PG  G  G  G  G PGP+G   D+G+ GP GD G  G  GL G DG  
Sbjct: 264 GNTGRAGETGLPGPAGSDGLDGTDGAPGPRG---DKGRTGPDGDKGRQGETGLPGPDGDS 320

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G DG+PG  G DG  G+ G PG  G PGT G  G+ G  G  G  G+ GI+G
Sbjct: 321 GRDGTDGLPGARGDDGSRGRPGRPGPAGRPGTPGIKGQPGERGDAGPNGRDGIDG 375



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 89/164 (54%), Gaps = 24/164 (14%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ GP G++G++G KG+ G KGE+G++G  G  G PG +G PG +G  G  G  G  G +
Sbjct: 2092 GMPGPAGERGDVGPKGQPGAKGEQGDQGNTGETGLPGDRGFPGRDGTAGLDGTDGARGDK 2151

Query: 173  GIPG---------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G+PG          +G+ G KGD G PG +GL      PG  G DG     G DG PG+D
Sbjct: 2152 GMPGTDGPDGRDGRDGRDGAKGDTGSPGEVGL------PGPAGDDGF---TGTDGAPGRD 2202

Query: 224  GLP------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G        G DG  G +G  GE G+ GPRG  G  G+NG  GT
Sbjct: 2203 GRDGDKGAIGNDGEDGDSGAPGETGLPGPRGLDGTDGMNGRDGT 2246



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 89/177 (50%), Gaps = 34/177 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG------APGVVGPPGPQGIPGDEGKRGPKGD 165
            PG +G  G  G  G  G+MG  G RG KG      APG+ G  G  G  G +G  GP+GD
Sbjct: 1044 PGARGFDGSDGADGDNGDMGFPGFRGPKGNAGPMGAPGLNGRDGTDGSTGRKGSAGPRGD 1103

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------------GEPGLDGIPGR 213
             G  GP+G  G +G  G  GD G PG  G DGR G P            G+ G DG+PGR
Sbjct: 1104 AGRQGPKGQSGLDGVPGTDGDDGAPGDNGSDGRPGRPGPQGEKGRRGPVGDDGTDGVPGR 1163

Query: 214  NGMDGIP------GKDGLPGKDGIPGTN----------GTNGEKGMTGPRGNRGKSG 254
            +G DG+P      G  G PG+ G+PG +          G  G  G +GP+G +G+SG
Sbjct: 1164 DGTDGVPGPRGPDGDKGAPGRPGLPGADDNTRYFKGHVGETGRPGDSGPKGIKGESG 1220



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 80/154 (51%), Gaps = 6/154 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
            G+ G  G  G  GAKG+ G+ G  G+ G PG  G    PG  G+PG +G++G  G  G P
Sbjct: 1822 GIGGVSGTDGREGAKGDTGMPGRPGDDGTPGTPGADGRPGRPGVPGVDGRKGMDGVPGQP 1881

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLD---GRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G +G  GD G  GP+G  G  GR G D   GRDG PG  G  G  G +G  G  G  G  
Sbjct: 1882 GAKGAEGDAGSPGPQGPKGVAGRDGEDGTPGRDGAPGPAGRKGAKGADGARGPAGDQGPK 1941

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G DG  G +G  G KG  G  G +G  G+ G PG
Sbjct: 1942 GLDGRDGRDGDAGAKGTPGDVGPKGAEGVQGAPG 1975



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 69/120 (57%), Gaps = 9/120 (7%)

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            PGP+G PGD+G  G  G  G  G  G PG +G RG   D G PG  G DG DG  G+ G 
Sbjct: 1005 PGPKGKPGDDGTDGLNGARGDAGAPGRPGTDGARG---DAGAPGARGFDGSDGADGDNGD 1061

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------RGKSGINGVPGT 261
             G PG  G  G  G  G PG +G  GT+G+ G KG  GPRG+      +G+SG++GVPGT
Sbjct: 1062 MGFPGFRGPKGNAGPMGAPGLNGRDGTDGSTGRKGSAGPRGDAGRQGPKGQSGLDGVPGT 1121



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 86/201 (42%), Gaps = 31/201 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G  G  G  G  G  G+ G +GA G  GP GP      +G  G  G  G+ G 
Sbjct: 2424 PGFTGAKGNAGRDGVPGADGADGDNGARGAKGRTGPVGP------DGDTGAPGAPGFDGT 2477

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG------------------IPGR 213
            QG PGD+G+ G  G  G  G  G+ G  G PGEPG  G                    G+
Sbjct: 2478 QGAPGDKGRSGAPGFKGRSGVAGIKGEMGRPGEPGEPGEDGRDGTDGRDGTDGGRGDKGQ 2537

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK----- 268
             G  G  G+DG PG DGI G  G  G++G TGP+G  G+ G +G  G       K     
Sbjct: 2538 KGRSGRDGRDGAPGDDGIDGRPGRKGQRGSTGPQGEAGEDGADGRDGAMGFTGDKGNSGV 2597

Query: 269  --RESCSLLPNSETSQLLIPP 287
              R+    +P S     L  P
Sbjct: 2598 PGRDGAKGMPGSRGETGLPGP 2618



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 82/165 (49%), Gaps = 31/165 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  G  G+KG  G +G+ G +G +G+ G  GV G  G  G PGD G     G  G PGPQ
Sbjct: 1087 GTDGSTGRKGSAGPRGDAGRQGPKGQSGLDGVPGTDGDDGAPGDNGS---DGRPGRPGPQ 1143

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKD 229
            G   ++G+RGP GD         DG DG+PG  G DG+PG  G D   G PG+ GLPG D
Sbjct: 1144 G---EKGRRGPVGD---------DGTDGVPGRDGTDGVPGPRGPDGDKGAPGRPGLPGAD 1191

Query: 230  -------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                         G PG +G  G KG +G    RG  G  G  G+
Sbjct: 1192 DNTRYFKGHVGETGRPGDSGPKGIKGESGGAARRGDPGPRGASGS 1236



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 86/178 (48%), Gaps = 33/178 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL GP G  G  G  G  G  G  G+KGA G  G  G  G PG+ G  GP+G     G  
Sbjct: 2182 GLPGPAGDDGFTGTDGAPGRDGRDGDKGAIGNDGEDGDSGAPGETGLPGPRG---LDGTD 2238

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGR---------------DGLPGEPGLDGIPGRNGMD 217
            G+ G +G  GP+GD G PGR G  GR               DG+ GE G  G+PGR+G D
Sbjct: 2239 GMNGRDGTAGPRGDKGMPGRDGSVGRKGQPGPQGPQGPRGRDGIDGEAGEKGMPGRDGRD 2298

Query: 218  ---GIPGKDGLPGKD---------GIPGTNGTNGEKGMT---GPRGNRGKSGINGVPG 260
               G PG  G PG +         G PG +G +GEKG     GP G+ G  G  G+PG
Sbjct: 2299 GNKGQPGAPGAPGANGNKGQPGDVGTPGLDGDDGEKGAKGAMGPDGDNGPRGETGLPG 2356



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 87/181 (48%), Gaps = 33/181 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDE------GKRGPK 163
            G  G  GQKG  G  G  G KG  G KG PG+   +G  G  G PGD+      G RGPK
Sbjct: 2020 GAPGEKGQKGRAGRDGRDGFKGMPGRKGEPGLNGDMGDNGADGAPGDDASDGAPGSRGPK 2079

Query: 164  GDMGYPG---PQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G  G  G    +G+PG  G+R   GPKG  G  G  G  G  G  G PG  G PGR+G  
Sbjct: 2080 GAPGRDGGMGAKGMPGPAGERGDVGPKGQPGAKGEQGDQGNTGETGLPGDRGFPGRDGTA 2139

Query: 218  GIPGKDGLPGKDGIPGT------------------NGTNGEKGMTGPRGNRGKSGINGVP 259
            G+ G DG  G  G+PGT                   G+ GE G+ GP G+ G +G +G P
Sbjct: 2140 GLDGTDGARGDKGMPGTDGPDGRDGRDGRDGAKGDTGSPGEVGLPGPAGDDGFTGTDGAP 2199

Query: 260  G 260
            G
Sbjct: 2200 G 2200



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 78/151 (51%), Gaps = 3/151 (1%)

Query: 113  GLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            GL GP G+    G  G  G+ G+ G +G+ G  G  G PGP G PG  G+ G KG  G  
Sbjct: 2353 GLPGPTGRPGLDGTDGVDGDRGLPGAKGDAGLTGRPGRPGPDGTPGTPGRNGFKGRAGED 2412

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G  G  GD G  G  G  G  GR G+ G DG  G+ G  G  GR G  G  G  G PG  
Sbjct: 2413 GLDGDNGDVGFPGFTGAKGNAGRDGVPGADGADGDNGARGAKGRTGPVGPDGDTGAPGAP 2472

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  GT G  G+KG +G  G +G+SG+ G+ G
Sbjct: 2473 GFDGTQGAPGDKGRSGAPGFKGRSGVAGIKG 2503



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 95/210 (45%), Gaps = 38/210 (18%)

Query: 88  LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
           LNA S +       FC+ T +    G  G  G +G  G  G  G +G +G KG   V G 
Sbjct: 617 LNASSFVSQFLEDVFCSETPDD---GDVGRPGDRGLPGPDGRPGPQGRKGYKGRDAVDGT 673

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---------DGR 198
           PG  G+PG      P GD G+PG  G  G +G  G KG+ G PGR G          DG 
Sbjct: 674 PGEDGLPG------PAGDSGFPGYPGRDGLDGTDGAKGNTGQPGRTGAPGPRGRDGQDGA 727

Query: 199 DG---------------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDG--IP-GTNGTNGE 240
            G                PG  G  G  GR G  G+PG  G PG DG   P G  G +G+
Sbjct: 728 KGQPGADGRDGDDGDRGFPGFQGPKGRTGRMGAKGMPGTPGSPGADGNNAPDGAKGADGD 787

Query: 241 KGMTGPRGNRGKSGINGVPGTP--AICAYK 268
           +G  GP+G +G  G  G+PG P  A+C  +
Sbjct: 788 RGFPGPQGPKGSPGAPGLPGVPGGAVCVGR 817



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 78/158 (49%), Gaps = 18/158 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G  G  G  G  G  GE+G+KG  G  G  G +G+PG +G+ G  GDMG  G  
Sbjct: 2002 GLPGVDGDAGVDGRDGTSGAPGEKGQKGRAGRDGRDGFKGMPGRKGEPGLNGDMGDNGAD 2061

Query: 173  GIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEP---------GLDGIPGRNGMD 217
            G PGD+      G RGPK   G PGR G  G  G+PG           G  G  G  G  
Sbjct: 2062 GAPGDDASDGAPGSRGPK---GAPGRDGGMGAKGMPGPAGERGDVGPKGQPGAKGEQGDQ 2118

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  G+ GLPG  G PG +GT G  G  G RG++G  G 
Sbjct: 2119 GNTGETGLPGDRGFPGRDGTAGLDGTDGARGDKGMPGT 2156



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 81/178 (45%), Gaps = 33/178 (18%)

Query: 113  GLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIP--------------- 154
            G QG  G KG  GA   KG  GV G +GE G PG  G PG  G                 
Sbjct: 2476 GTQGAPGDKGRSGAPGFKGRSGVAGIKGEMGRPGEPGEPGEDGRDGTDGRDGTDGGRGDK 2535

Query: 155  GDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDG----------- 200
            G +G+ G  G  G PG  GI   PG +G+RG  G  G  G  G DGRDG           
Sbjct: 2536 GQKGRSGRDGRDGAPGDDGIDGRPGRKGQRGSTGPQGEAGEDGADGRDGAMGFTGDKGNS 2595

Query: 201  -LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             +PG  G  G+PG  G  G+PG  G  G  G  G +G  G KG+TG  G+ G +G  G
Sbjct: 2596 GVPGRDGAKGMPGSRGETGLPGPRGDAGPQGPRGRDGDKGAKGLTGRMGDVGLAGQEG 2653



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 71/150 (47%), Gaps = 30/150 (20%)

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------------------------IG 194
            + G KGD G+ G  G PG +G+ G  G+ G PGR                         G
Sbjct: 1748 RTGDKGDKGFKGQPGRPGIKGEAGEPGENGVPGRPGSPGKGGSVGPDGDAGPRGDKGDSG 1807

Query: 195  LDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRG 248
            LDGR    G PGE G+ G+ G +G +G  G  G+PG+   DG PGT G +G  G  G  G
Sbjct: 1808 LDGRPGDRGRPGETGIGGVSGTDGREGAKGDTGMPGRPGDDGTPGTPGADGRPGRPGVPG 1867

Query: 249  NRGKSGINGVPGTPAICAYKRESCSLLPNS 278
              G+ G++GVPG P     + ++ S  P  
Sbjct: 1868 VDGRKGMDGVPGQPGAKGAEGDAGSPGPQG 1897



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 77/160 (48%), Gaps = 10/160 (6%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L    G   ST      G +G  G++G  G  G  GV G  G+ GAPG  G  G  G PG
Sbjct: 1082 LNGRDGTDGSTGRKGSAGPRGDAGRQGPKGQSGLDGVPGTDGDDGAPGDNGSDGRPGRPG 1141

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDG----LPGEP 205
             +G++G +G +G  G  G+PG +G       RGP GD G PGR GL G D       G  
Sbjct: 1142 PQGEKGRRGPVGDDGTDGVPGRDGTDGVPGPRGPDGDKGAPGRPGLPGADDNTRYFKGHV 1201

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G  G PG +G  GI G+ G   + G PG  G +G    TG
Sbjct: 1202 GETGRPGDSGPKGIKGESGGAARRGDPGPRGASGSGTCTG 1241



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 75/162 (46%), Gaps = 18/162 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ G  G+ G  G  G  GV G+ GE G  G  G PG  G P   G RG KG+ G PG  
Sbjct: 1423 GVDGTPGRDGTPGRDGVKGVAGDAGEDGLRGTDGLPGRDGTP---GPRGDKGEEGAPGSP 1479

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG-------- 224
            G+PG +G  G  G  G  G  G DGRDG     G DG  G  GM G+ G+ G        
Sbjct: 1480 GVPGRDGTSGRPGPKGRTGPAGDDGRDGT---NGADGDVGAKGMRGMQGRKGAVGGRGEP 1536

Query: 225  ----LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                L G  G  G  G  G KG+ G RG  G SG  G  G P
Sbjct: 1537 GLGGLSGDKGDKGAKGFKGRKGLKGRRGMTGFSGRPGFTGAP 1578



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 78/149 (52%), Gaps = 3/149 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G+ G  G  G+ G  G RG  G PG  G PGP+G  G+EG  G  G  G  G 
Sbjct: 1428 PGRDGTPGRDGVKGVAGDAGEDGLRGTDGLPGRDGTPGPRGDKGEEGAPGSPGVPGRDGT 1487

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PG +G+ GP GD    GR G +G DG  G  G+ G+ GR G  G  G+ GL G  G 
Sbjct: 1488 SGRPGPKGRTGPAGDD---GRDGTNGADGDVGAKGMRGMQGRKGAVGGRGEPGLGGLSGD 1544

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G KG  G +G RG +G +G PG
Sbjct: 1545 KGDKGAKGFKGRKGLKGRRGMTGFSGRPG 1573



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/132 (40%), Positives = 64/132 (48%), Gaps = 5/132 (3%)

Query: 92   SRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
             R     M G    T    P G  GP G +G  G KG  G+ G  G+ G  G  G  G  
Sbjct: 2599 GRDGAKGMPGSRGETGLPGPRGDAGPQGPRGRDGDKGAKGLTGRMGDVGLAGQEGDMGEL 2658

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI--GLDGRDGLPGEPGLDG 209
            G  G +G+ G KG  G PG    PGD+G +G +GD G PGR+  G  G  GL GE G+ G
Sbjct: 2659 GFTGRDGRDGVKGSAGRPG---RPGDDGHKGFRGDAGAPGRLVAGDSGFKGLLGEAGVKG 2715

Query: 210  IPGRNGMDGIPG 221
             PG  G  G PG
Sbjct: 2716 QPGIKGSAGAPG 2727



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 83/191 (43%), Gaps = 29/191 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KGE GA G  GV G  G  G PG  G  GP G  G +G  G  GD+G  G +
Sbjct: 1462 GTPGPRGDKGEEGAPGSPGVPGRDGTSGRPGPKGRTGPAGDDGRDGTNGADGDVGAKGMR 1521

Query: 173  GIPGDEGKRGP------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+   +G++G              GD G  G  G  GR GL G  G+ G  GR G  G P
Sbjct: 1522 GM---QGRKGAVGGRGEPGLGGLSGDKGDKGAKGFKGRKGLKGRRGMTGFSGRPGFTGAP 1578

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMT--------------GPRGNRGKSGINGVPGTPAICA 266
            G DG+ G DG    NG  G KG T              GP+G  G  G  G  G    C 
Sbjct: 1579 GDDGVDGADGRDAGNGDKGYKGQTVFGPAGPKGVAGPAGPKGMDGAKGATGDAGVSGQCV 1638

Query: 267  YKRESCSLLPN 277
              RE   L+ N
Sbjct: 1639 DTREHDRLIQN 1649



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 9/98 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG++G  G++G+ G  G  G+ G  G+KG  G  G PG   +PG +G  G KG  G PG 
Sbjct: 353 PGIKGQPGERGDAGPNGRDGIDGGVGDKGERGDTGGPG---VPGLDGTVGRKGYDGRPGE 409

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            G+PG       KG+ G+PG  G  G  G+PG PG +G
Sbjct: 410 TGLPG------VKGEPGFPGPQGPKGDQGVPGLPGPEG 441



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 54/104 (51%), Gaps = 21/104 (20%)

Query: 112 PGLQGPIGQ------KGEIGAKGE------------MGVKGERGEKGAPGVVGPPGPQGI 153
           PG  GP G+      KG+ G +G+            +G KGERG+ G PGV   PG  G 
Sbjct: 341 PGRPGPAGRPGTPGIKGQPGERGDAGPNGRDGIDGGVGDKGERGDTGGPGV---PGLDGT 397

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            G +G  G  G+ G PG +G PG  G +GPKGD G PG  G +G
Sbjct: 398 VGRKGYDGRPGETGLPGVKGEPGFPGPQGPKGDQGVPGLPGPEG 441


>gi|155030214|ref|NP_001094381.1| collagen alpha-1(IX) chain precursor [Gallus gallus]
          Length = 920

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/185 (43%), Positives = 100/185 (54%), Gaps = 36/185 (19%)

Query: 110 CPPG---------LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDE 157
           CPPG         ++G  G KGE G  G+ G KGE G++G  G VG   PPG  GI G  
Sbjct: 413 CPPGRPGHAGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPIGEVGAQGPPGILGIRGIT 472

Query: 158 GKRGPKGDMGY------PGPQGI---PGDEGKR------GPKGDMGYPGRIGLDGRDGLP 202
           G  GPKG+ G       PGPQG+   PGD+G+R      GPKG+ G  G  G++G  G  
Sbjct: 473 GITGPKGNKGARGLDGDPGPQGLPGAPGDQGQRGPVGEEGPKGERGPQGTRGINGLPGPK 532

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKS 253
           GE GL G+ GR G+ G+PG  G PGK G PG  G  G          KG+ GP+GNRG  
Sbjct: 533 GESGLPGVDGREGIPGMPGAKGEPGKPGTPGDTGPPGLPGLPGSPGMKGIPGPKGNRGPP 592

Query: 254 GINGV 258
           G+ G+
Sbjct: 593 GVPGL 597



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 99/193 (51%), Gaps = 42/193 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGE---------MGVKGERGEKG 140
           L+ M+G   S  E   PG QG  G++G      E+GA+G           G+ G +G KG
Sbjct: 423 LMGMKGQKGSKGESGEPGKQGYKGEEGDQGPIGEVGAQGPPGILGIRGITGITGPKGNKG 482

Query: 141 APGVVGPPGPQGI---PGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           A G+ G PGPQG+   PGD+G+RGP   +G  G  GPQG  G  G  GPKG+ G P   G
Sbjct: 483 ARGLDGDPGPQGLPGAPGDQGQRGPVGEEGPKGERGPQGTRGINGLPGPKGESGLP---G 539

Query: 195 LDGRDGLPGEPGLDGIPGRNG------------------MDGIPGKDGLPGKDGIPGTNG 236
           +DGR+G+PG PG  G PG+ G                  M GIPG  G  G  G+PG  G
Sbjct: 540 VDGREGIPGMPGAKGEPGKPGTPGDTGPPGLPGLPGSPGMKGIPGPKGNRGPPGVPGLMG 599

Query: 237 TNGEKGMTGPRGN 249
            +G+ G  GP G 
Sbjct: 600 NSGKPGEQGPEGE 612



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 68/121 (56%), Gaps = 12/121 (9%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G PG  G+ G +G++G KG+ G PG QG  G+EG +GP G+      +G  G  G+ G  
Sbjct: 416 GRPGHAGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPIGE------VGAQGPPGILGIR 469

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKS---GINGVP 259
           G+ GI G  G  G  G DG PG  G+PG  G  G++G     GP+G RG     GING+P
Sbjct: 470 GITGITGPKGNKGARGLDGDPGPQGLPGAPGDQGQRGPVGEEGPKGERGPQGTRGINGLP 529

Query: 260 G 260
           G
Sbjct: 530 G 530



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 79/213 (37%), Gaps = 77/213 (36%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPK---GDMGYPGPQGI---PGDEGKRGPKGD 186
           KG+RG  G PG   P G QG PG EG  G K   GDMG PG +G    PGD G RGP+G 
Sbjct: 661 KGDRGSAGEPG---PKGEQGAPGSEGDAGEKGDLGDMGLPGAKGSVGNPGDPGSRGPEGS 717

Query: 187 MGYPGR---------IGLDGRDGLPGEPGLDGIPGR------------------------ 213
            G PG           GL G  G PG PG  G  G+                        
Sbjct: 718 RGLPGMEGPRGAPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLSQLAA 777

Query: 214 ---------------------------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                                      NG  G  G  GLPG  G PG  G  G KG  G 
Sbjct: 778 SLRRPEFGAPGLPGRPGPPGAPGPPGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEAGE 837

Query: 247 RGNR--------GKSGINGVPGTPAICAYKRES 271
           RG R        G  G  G+PG P   +Y RE 
Sbjct: 838 RGERGFPGRGVKGLPGPRGLPGEPGKPSYGREG 870



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 84/207 (40%), Gaps = 68/207 (32%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E   PG +G  G+KG++G  G  G KG  G  G PG  GP G +G+PG EG RG  G  G
Sbjct: 675 EQGAPGSEGDAGEKGDLGDMGLPGAKGSVGNPGDPGSRGPEGSRGLPGMEGPRGAPGPRG 734

Query: 168 YPGPQGIPGDEGKRGPKG------------------------------------------ 185
             G QG PG  G +GP G                                          
Sbjct: 735 LQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLSQLAASLRRPEFGAPGLPGRPG 794

Query: 186 ---------DMGYPGRIG---LDGRDGLPGEPGLD------------GIPGRNGMDGIPG 221
                    + G+PG++G   L G  G PGE G              G PGR G+ G+PG
Sbjct: 795 PPGAPGPPGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEAGERGERGFPGR-GVKGLPG 853

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             GLPG+ G P + G  G  G+ GP G
Sbjct: 854 PRGLPGEPGKP-SYGREGRDGVRGPPG 879



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 83/218 (38%), Gaps = 66/218 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------------QGIPGDE 157
           GL GP G+ G  G  G  G+ G  G KG PG  G PG                +GIPG +
Sbjct: 527 GLPGPKGESGLPGVDGREGIPGMPGAKGEPGKPGTPGDTGPPGLPGLPGSPGMKGIPGPK 586

Query: 158 GKRGPKGDMGYPGPQGIPGDEG------------------------------KRGPKGDM 187
           G RGP G  G  G  G PG++G                              K GP+GD+
Sbjct: 587 GNRGPPGVPGLMGNSGKPGEQGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQGDI 646

Query: 188 ------------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
                             G  G  G  G  G PG  G  G  G  G  G+PG  G  G  
Sbjct: 647 GLPGLPGPPGLPGGKGDRGSAGEPGPKGEQGAPGSEGDAGEKGDLGDMGLPGAKGSVGNP 706

Query: 230 GIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAI 264
           G PG+ G  G +   GM GPRG  G  G+ G  G P +
Sbjct: 707 GDPGSRGPEGSRGLPGMEGPRGAPGPRGLQGEQGAPGL 744



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 21/93 (22%)

Query: 138 EKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-- 192
           E G PG +GP   PG +G PG+ G++GPKG+ G                +G+ G+PGR  
Sbjct: 804 ENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEAGE---------------RGERGFPGRGV 848

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            GL G  GLPGEPG     GR G DG+ G  G+
Sbjct: 849 KGLPGPRGLPGEPGKPSY-GREGRDGVRGPPGV 880


>gi|395512645|ref|XP_003760546.1| PREDICTED: collagen alpha-3(V) chain [Sarcophilus harrisii]
          Length = 1769

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 84/156 (53%), Gaps = 15/156 (9%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYPG 170
           +QGP G  G  G  G +G+ G  G KG PG+ GP GP   QG+PG  GK G +G  G  G
Sbjct: 498 MQGPPGPIGLTGRAGPLGLPGYPGLKGEPGIAGPQGPRGLQGLPGPSGKEGKQGRSGADG 557

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           P+G+PGD    GPKGD G+      DG  GLPGE G  G  G  G  G PG+DG  G +G
Sbjct: 558 PRGLPGD---TGPKGDRGF------DGLPGLPGEKGQRGDVGHVGQPGPPGEDGKKGSEG 608

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            PG  G  GE    GPRG  G  G  G PG P +  
Sbjct: 609 PPGPRGQAGE---PGPRGLIGARGSPGAPGQPGVVG 641



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 94/178 (52%), Gaps = 33/178 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GL+G  G  G +G +GE G +G +G+ G  G  GPPGP G         +PG  G++GPK
Sbjct: 764 GLKGDRGDPGPLGPRGEDGPEGLKGQAGLLGEEGPPGPAGEKGKLGIPGLPGYPGRQGPK 823

Query: 164 GDMGYPGPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G +G+PGP G+PG++GKRG       +G+ G PG  G  G++G  G+PG  G  G +G  
Sbjct: 824 GSIGFPGPLGLPGEKGKRGKAGQPGQEGERGPPGARGERGQNGPTGKPGPKGDVGHDGSA 883

Query: 218 GIPGKDGLPG------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G PG+ GLPG                  K+G PG  G  GE G  G  G  G +G+ G
Sbjct: 884 GFPGEKGLPGLKGALGFPGPKGPPGPAGKEGRPGHPGQRGELGFQGQTGPPGPAGVIG 941



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 81/157 (51%), Gaps = 6/157 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G  G  G  G+ GVKG  G +G  G  G  G  G PG +G  G KGD G PGP 
Sbjct: 716 GAQGPEGSIGPTGYPGQRGVKGTSGNRGLKGEKGEKGEDGFPGFKGDAGLKGDRGDPGPL 775

Query: 173 GIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  G++G  G KG  G       PG  G  G+ G+PG PG  G  G  G  G PG  GLP
Sbjct: 776 GPRGEDGPEGLKGQAGLLGEEGPPGPAGEKGKLGIPGLPGYPGRQGPKGSIGFPGPLGLP 835

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G+ G  G  G  G++G  GP G RG+ G NG  G P 
Sbjct: 836 GEKGKRGKAGQPGQEGERGPPGARGERGQNGPTGKPG 872



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 86/159 (54%), Gaps = 9/159 (5%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG+ G+KG+RG+ G      P GP+G  G EG +G  G +G  
Sbjct: 743 GLKGEKGEKGEDGFPGFKGDAGLKGDRGDPG------PLGPRGEDGPEGLKGQAGLLGEE 796

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G  G++GK G  G  GYPGR G  G  G PG  GL G  G+ G  G PG++G  G  
Sbjct: 797 GPPGPAGEKGKLGIPGLPGYPGRQGPKGSIGFPGPLGLPGEKGKRGKAGQPGQEGERGPP 856

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G NG  G  GP+G+ G  G  G PG   +   K
Sbjct: 857 GARGERGQNGPTGKPGPKGDVGHDGSAGFPGEKGLPGLK 895



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 86/172 (50%), Gaps = 21/172 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G      E  PPG   P G+KG++G  G  G  G +G KG+   +G PGP G+PG++
Sbjct: 785 GLKGQAGLLGEEGPPG---PAGEKGKLGIPGLPGYPGRQGPKGS---IGFPGPLGLPGEK 838

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM- 216
           GKRG  G  G  G +G PG  G+RG  G  G PG  G  G DG  G PG  G+PG  G  
Sbjct: 839 GKRGKAGQPGQEGERGPPGARGERGQNGPTGKPGPKGDVGHDGSAGFPGEKGLPGLKGAL 898

Query: 217 --------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                         +G PG  G  G+ G  G  G  G  G+ GP+G  G++G
Sbjct: 899 GFPGPKGPPGPAGKEGRPGHPGQRGELGFQGQTGPPGPAGVIGPQGKTGETG 950



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 82/146 (56%), Gaps = 3/146 (2%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G+KG  G +G +G  G  G++G   V G  G +G+ G++G++G  G  G+ G 
Sbjct: 706 PGHEGPTGEKGAQGPEGSIGPTGYPGQRG---VKGTSGNRGLKGEKGEKGEDGFPGFKGD 762

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G+ GD G  GP G  G  G  GL G+ GL GE G  G  G  G  GIPG  G PG+ G 
Sbjct: 763 AGLKGDRGDPGPLGPRGEDGPEGLKGQAGLLGEEGPPGPAGEKGKLGIPGLPGYPGRQGP 822

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGING 257
            G+ G  G  G+ G +G RGK+G  G
Sbjct: 823 KGSIGFPGPLGLPGEKGKRGKAGQPG 848



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 95/211 (45%), Gaps = 60/211 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---GPPGPQG---------------IP 154
           G  GP GQ GE G +G +G +G  G  G PGVV   GPPG +G                P
Sbjct: 608 GPPGPRGQAGEPGPRGLIGARGSPGAPGQPGVVGIDGPPGAKGNVGIPGEPGPPGQQGNP 667

Query: 155 GDEGKRGPKGDMGYP------------------GPQGIPGDE------GKRGPKGDM--- 187
           G +G  GP+G +G P                  GP G PG E      G +GP+G +   
Sbjct: 668 GSQGLPGPQGPIGEPGDKGPPGKPGIPGLPGAEGPPGHPGHEGPTGEKGAQGPEGSIGPT 727

Query: 188 GYPGRIGLDGRD------GLPGEPGLDGIPGRNGMDGIPGKDGLP---------GKDGIP 232
           GYPG+ G+ G        G  GE G DG PG  G  G+ G  G P         G +G+ 
Sbjct: 728 GYPGQRGVKGTSGNRGLKGEKGEKGEDGFPGFKGDAGLKGDRGDPGPLGPRGEDGPEGLK 787

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  GE+G  GP G +GK GI G+PG P 
Sbjct: 788 GQAGLLGEEGPPGPAGEKGKLGIPGLPGYPG 818



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 92/206 (44%), Gaps = 60/206 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGPPGPQG---IPGDEGKRGP 162
           PG+ GP G +G  G  G  G +G++G  GA      PG  GP G +G   +PG  G++G 
Sbjct: 526 PGIAGPQGPRGLQGLPGPSGKEGKQGRSGADGPRGLPGDTGPKGDRGFDGLPGLPGEKGQ 585

Query: 163 KGDMGYPGPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGEP------GLDGI 210
           +GD+G+ G  G PG++GK+      GP+G  G PG  GL G  G PG P      G+DG 
Sbjct: 586 RGDVGHVGQPGPPGEDGKKGSEGPPGPRGQAGEPGPRGLIGARGSPGAPGQPGVVGIDGP 645

Query: 211 PGRNGMDGI------------PGKDGLPGKDGI--------------------------- 231
           PG  G  GI            PG  GLPG  G                            
Sbjct: 646 PGAKGNVGIPGEPGPPGQQGNPGSQGLPGPQGPIGEPGDKGPPGKPGIPGLPGAEGPPGH 705

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGING 257
           PG  G  GEKG  GP G+ G +G  G
Sbjct: 706 PGHEGPTGEKGAQGPEGSIGPTGYPG 731



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 88/187 (47%), Gaps = 27/187 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ+G++G  G+ G  GE G+KG+ G  GP G  G PG  G  G +G  G PG 
Sbjct: 577 PGLPGEKGQRGDVGHVGQPGPPGEDGKKGSEGPPGPRGQAGEPGPRGLIGARGSPGAPGQ 636

Query: 172 QGIPGDEGKRGPKGDMGY------------PGRIGLDGRDGLPGEPG------------- 206
            G+ G +G  G KG++G             PG  GL G  G  GEPG             
Sbjct: 637 PGVVGIDGPPGAKGNVGIPGEPGPPGQQGNPGSQGLPGPQGPIGEPGDKGPPGKPGIPGL 696

Query: 207 --LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              +G PG  G +G  G+ G  G +G  G  G  G++G+ G  GNRG  G  G  G    
Sbjct: 697 PGAEGPPGHPGHEGPTGEKGAQGPEGSIGPTGYPGQRGVKGTSGNRGLKGEKGEKGEDGF 756

Query: 265 CAYKRES 271
             +K ++
Sbjct: 757 PGFKGDA 763



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 89/199 (44%), Gaps = 45/199 (22%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPKG 164
           P GL G  G KG+ G  G  G+ GE+G++G  G VG PGP   PG++GK+      GP+G
Sbjct: 558 PRGLPGDTGPKGDRGFDGLPGLPGEKGQRGDVGHVGQPGP---PGEDGKKGSEGPPGPRG 614

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------------EPGLDG 209
             G PGP+G+    G RG  G  G PG +G+DG  G  G                PG  G
Sbjct: 615 QAGEPGPRGL---IGARGSPGAPGQPGVVGIDGPPGAKGNVGIPGEPGPPGQQGNPGSQG 671

Query: 210 IPGRNGMDGIPGKD------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           +PG  G  G PG                    G PG +G  G  G  G +G  GP G  G
Sbjct: 672 LPGPQGPIGEPGDKGPPGKPGIPGLPGAEGPPGHPGHEGPTGEKGAQGPEGSIGPTGYPG 731

Query: 252 KSGINGVPGTPAICAYKRE 270
           + G+ G  G   +   K E
Sbjct: 732 QRGVKGTSGNRGLKGEKGE 750



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 92/214 (42%), Gaps = 39/214 (18%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIG------------------QKGEIGAKGEMGVKGERG 137
            L   QG         PPG +GP+G                    GE GA GE G  G  G
Sbjct: 1014 LKGSQGPPGPIGANGPPGERGPVGPAGGIGLPGQGGGQGPLGPAGETGAAGERGPPGPTG 1073

Query: 138  EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPG 191
            + G PG+ GP GP G  G  G+ G KG+MG PG +G  GD+      G  G +G  G+PG
Sbjct: 1074 KDGIPGLPGPLGPAGATGPAGEDGDKGEMGAPGHKGSKGDKGEPGPPGPTGIQGPAGHPG 1133

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNG---------------MDGIPGKDGLPGKDGIPGTNG 236
              G DG  G  G PGL G  G +G               M G PG+ G  G  G  G +G
Sbjct: 1134 LPGADGERGRRGPPGLFGQKGDDGVRGFPGGIGPPGLQGMPGPPGEKGEVGDVGSMGPHG 1193

Query: 237  TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
              G +G  GP G+ G  G+ G  G P     K E
Sbjct: 1194 APGPRGPQGPSGSEGSPGLPGGIGQPGAVGEKGE 1227



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 89/211 (42%), Gaps = 69/211 (32%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP+G  GE G +G+ G  G+ GE+G PG  G    +G  G  GK GPKGD+G+ G  
Sbjct: 827  GFPGPLGLPGEKGKRGKAGQPGQEGERGPPGARGE---RGQNGPTGKPGPKGDVGHDGSA 883

Query: 173  GIPGDEGKRGPKGDM------------------GYPGR---IGLDGRDGLPGEPGLDG-- 209
            G PG++G  G KG +                  G+PG+   +G  G+ G PG  G+ G  
Sbjct: 884  GFPGEKGLPGLKGALGFPGPKGPPGPAGKEGRPGHPGQRGELGFQGQTGPPGPAGVIGPQ 943

Query: 210  ----------------------------IPGRNGMDGIPGKDGLPGKD------------ 229
                                        + GR G  G PG  GLPGKD            
Sbjct: 944  GKTGETGPLGERGHPGPPGPPGEQGLPGLLGREGAQGDPGPAGLPGKDGPPGPRGFPGPR 1003

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG  GT G KG  GP    G  G NG PG
Sbjct: 1004 GAPGDTGTTGLKGSQGP---PGPIGANGPPG 1031



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 88/233 (37%), Gaps = 75/233 (32%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGE---------------MGVKGERGEKGAPGVV 145
            GF   T    P G+ GP G+ GE G  GE                G+ G  G +G PG  
Sbjct: 926  GFQGQTGPPGPAGVIGPQGKTGETGPLGERGHPGPPGPPGEQGLPGLLGREGAQGDPGPA 985

Query: 146  GPPG------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP---------- 183
            G PG            P+G PGD G  G KG  G PGP G  G  G+RGP          
Sbjct: 986  GLPGKDGPPGPRGFPGPRGAPGDTGTTGLKGSQGPPGPIGANGPPGERGPVGPAGGIGLP 1045

Query: 184  -----------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                              G+ G PG  G DG  GLPG  G  G  G  G DG  G+ G P
Sbjct: 1046 GQGGGQGPLGPAGETGAAGERGPPGPTGKDGIPGLPGPLGPAGATGPAGEDGDKGEMGAP 1105

Query: 227  GKDGI---------------------PGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G                      PG  G +GE+G  GP G  G+ G +GV
Sbjct: 1106 GHKGSKGDKGEPGPPGPTGIQGPAGHPGLPGADGERGRRGPPGLFGQKGDDGV 1158



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 99/270 (36%), Gaps = 86/270 (31%)

Query: 64  DLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGE 123
           +L E    R++E+ N T N+ +       R P   +  F N+ ++          GQKGE
Sbjct: 355 ELPEPREGRDEERGNYTMNSIY---GPAERGPESQIYIFPNAGEK----------GQKGE 401

Query: 124 I----------------------------------------GAKGEMGVKGERGEKGAPG 143
                                                    G  G  G+ G  G +G PG
Sbjct: 402 PAVIEVGQQFEGYPGLPGPLGIVGPSGPPGPPGFPGDPGERGPAGRPGLPGVDGIRGLPG 461

Query: 144 VV-------------GPP--------------------GPQGIPGDEGKRGPKGDMGYPG 170
            V             GPP                    GP G  G  G+ GP G  GYPG
Sbjct: 462 TVIMMPFHFGGESLKGPPSSFQQAQAQAVLQQTQLSMQGPPGPIGLTGRAGPLGLPGYPG 521

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            +G PG  G +GP+G  G PG  G +G+ G  G  G  G+PG  G  G  G DGLPG  G
Sbjct: 522 LKGEPGIAGPQGPRGLQGLPGPSGKEGKQGRSGADGPRGLPGDTGPKGDRGFDGLPGLPG 581

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G  GP G  GK G  G PG
Sbjct: 582 EKGQRGDVGHVGQPGPPGEDGKKGSEGPPG 611



 Score = 42.7 bits (99), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 76/208 (36%), Gaps = 63/208 (30%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------------GDEGKR 160
            G  G  G KG  G  G  G  G PG  GP GP G                    G  G+R
Sbjct: 1007 GDTGTTGLKGSQGPPGPIGANGPPGERGPVGPAGGIGLPGQGGGQGPLGPAGETGAAGER 1066

Query: 161  GPKGDMGYP---------GPQGIPGDEGKRGPKGDMGYPGRIGLDG-------------- 197
            GP G  G           GP G  G  G+ G KG+MG PG  G  G              
Sbjct: 1067 GPPGPTGKDGIPGLPGPLGPAGATGPAGEDGDKGEMGAPGHKGSKGDKGEPGPPGPTGIQ 1126

Query: 198  -RDGLPGEPGLDGIPGRNGMDGIPGKD---------------------GLPGKDGIPGTN 235
               G PG PG DG  GR G  G+ G+                      G PG+ G  G  
Sbjct: 1127 GPAGHPGLPGADGERGRRGPPGLFGQKGDDGVRGFPGGIGPPGLQGMPGPPGEKGEVGDV 1186

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G  G  GPRG +G SG  G PG P 
Sbjct: 1187 GSMGPHGAPGPRGPQGPSGSEGSPGLPG 1214



 Score = 42.7 bits (99), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 47/101 (46%), Gaps = 18/101 (17%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGI---------------PGDEGKRGPKGDMGY 168
             G  G  G  GERG +G PG+ G  G  G+               PG  G++G  GD+G 
Sbjct: 1129 AGHPGLPGADGERGRRGPPGLFGQKGDDGVRGFPGGIGPPGLQGMPGPPGEKGEVGDVGS 1188

Query: 169  PGPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLPGEPG 206
             GP G PG  G +GP G     G PG IG  G  G  GEPG
Sbjct: 1189 MGPHGAPGPRGPQGPSGSEGSPGLPGGIGQPGAVGEKGEPG 1229


>gi|410047940|ref|XP_003314261.2| PREDICTED: collagen alpha-1(IV) chain [Pan troglodytes]
          Length = 1770

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 37/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            PG QG  G  G+ GAKGE        +G+ G RGEKG  G+ G       PG  G++G K
Sbjct: 1132 PGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAG------FPGSPGEKGEK 1185

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
            G +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIPG  G  G+PG  
Sbjct: 1186 GTIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTP 1242

Query: 222  -------KDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRGKSGINGVPGTPA 263
                   + G PG DGIPG+ G  GE G+            G +G++G+ G  G+ G+P 
Sbjct: 1243 GPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPG 1302

Query: 264  ICAYKRE 270
            I   K E
Sbjct: 1303 IPGSKGE 1309



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 964  PGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPG---LPGE------KGDHGFPGS 1014

Query: 172  QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
             G  GD G +G KGD+G PG+                        IG  G  G  G+PG 
Sbjct: 1015 SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 1074

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 1075 PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 1124



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 82/153 (53%), Gaps = 29/153 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD   PG  G PG  
Sbjct: 1049 GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD---PGISGTPGAP 1105

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GPKG +G     G+    GLPG PG  G+PG      IPG  G PG   +PG  G  
Sbjct: 1106 GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGSPG---LPGDKGAK 1147

Query: 239  GEKGMTGP--------RGNRGKSGINGVPGTPA 263
            GEKG  GP        RG +G  GI G PG+P 
Sbjct: 1148 GEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPG 1180



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 91/173 (52%), Gaps = 28/173 (16%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 1061 GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 1120

Query: 167  ---------GYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP--- 211
                     G PGPQ   G+PGD+G +G KG  G PG IG+ G  G  G+ G+ G P   
Sbjct: 1121 GTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSP 1179

Query: 212  ---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
               G  G  GIPG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG 
Sbjct: 1180 GEKGEKGTIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGV 1232



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 91/177 (51%), Gaps = 28/177 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGP---PGPQ---GIPGDEGK 159
            PG  GP G  G  G  G  G+ G +G        G PG  G    PGPQ   G+PGD+G 
Sbjct: 1087 PGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGA 1146

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGR 213
            +G KG  G PG  GIPG  G++G +G  G+PG  G  G        G+PG PGL G PG 
Sbjct: 1147 KGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSPGEKGEKGTIGIPGMPGSPGLKGSPGS 1205

Query: 214  NGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGT 261
             G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G +G+PG+
Sbjct: 1206 VGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGS 1262



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 86/176 (48%), Gaps = 25/176 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL  P G KG+ GA+G  G+ G+ G  G PG  G PG  G PG +G+ G  G  G PG 
Sbjct: 935  PGLDMP-GPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGS 993

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD------------- 217
             G  G  G  G KGD G+PG  G  G  GL G+ G  G+PG+ G MD             
Sbjct: 994  PGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGD 1053

Query: 218  ----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                      G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 1054 QGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 1109



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 73/143 (51%), Gaps = 16/143 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------PK 163
            G  G  G+KGE G  G  G+ G  G KG+PG VG PG  G+PG++G +G          K
Sbjct: 1174 GFPGSPGEKGEKGTIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVK 1233

Query: 164  GDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+ G PG   P G     G++G  G  G PG  G  G  GLPG  G  G PG  G  G  
Sbjct: 1234 GEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPGR-GFPGFPGAKGDKGSK 1289

Query: 221  GKDGLPGKDGIPGTNGTNGEKGM 243
            G+ G PG  G PG  G+ GE+G 
Sbjct: 1290 GEVGFPGLAGSPGIPGSKGEQGF 1312



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 61/123 (49%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----DE 178
           EIG  G+ G KG+RG  G  GV G PGPQG PG          +G PG +G PG    D 
Sbjct: 588 EIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGL---------IGQPGAKGEPGEIYFDL 638

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
             +G KGD G+PG+                G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 639 RLKGDKGDPGFPGQ---------------PGMPGRAGSPGRDGHPGLPGPKGSPGSVGLK 683

Query: 239 GEK 241
           GE+
Sbjct: 684 GER 686



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 85/203 (41%), Gaps = 66/203 (32%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP GQKGE G+    G     GE+GE G PG   P    G PG +G +G KG++G+
Sbjct: 1242 PGPTGPAGQKGEPGSDGIPGSA---GEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGF 1294

Query: 169  P---GPQGIPGDEGKR-----------------------GPKGDM--------------- 187
            P   G  GIPG +G++                       GPKGD                
Sbjct: 1295 PGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPM 1354

Query: 188  ---------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                           G PG  G  G  G  G+PG  G+PG  G  GI G  G  G  G+P
Sbjct: 1355 GPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVP 1414

Query: 233  GTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G  G+ G +G++G  GI
Sbjct: 1415 GFQGPKGLPGLQGIKGDQGDQGI 1437



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 56/110 (50%), Gaps = 27/110 (24%)

Query: 114 LQGPIGQKGEIGAKGEMGV--------------KGERGEKGAPGVVGPPGPQGIPGDEGK 159
            QGP G KG+ G  G  GV              KGE+G+KG PG       QG+PG    
Sbjct: 224 FQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGF------QGMPG---- 273

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPG 206
            G KG+ G PGP+G PG +G +G KG  G+PG     GL GR G  GE G
Sbjct: 274 VGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKG 323



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 83/197 (42%), Gaps = 49/197 (24%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
            GL G  G  G  G KG +GV G  GE GA   +GPPG QGI G+ G              
Sbjct: 844  GLPGLPGIPGTPGEKGSIGVPGVPGEHGA---IGPPGLQGIRGEPGPPGLPGSVGSPGVP 900

Query: 160  -------------------------RGPKGDMGYPG--PQGIPGDEGKRGPKGDMGYPGR 192
                                     +G KG  G+PG    G  GD+G +G  G  G  G 
Sbjct: 901  GIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGL 960

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             GL G+ G PG PG  G  G  G+ G PG+ G PG  G PG  G  G+ G  G  G RG 
Sbjct: 961  PGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGD 1020

Query: 253  SGIN------GVPGTPA 263
             G+       G+PG P 
Sbjct: 1021 PGLKGDKGDVGLPGKPG 1037



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 57/137 (41%), Gaps = 45/137 (32%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 745 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 804

Query: 184 ------------------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                                   +G  G PG +GL G  GLPG PG+ G PG  G  G+
Sbjct: 805 PGDVGPPGTPGRPGFNGLPGNPGVQGQKGEPG-VGLPGLKGLPGLPGIPGTPGEKGSIGV 863

Query: 220 PGKDGLPGKDGIPGTNG 236
           PG  G  G  G PG  G
Sbjct: 864 PGVPGEHGAIGPPGLQG 880


>gi|432110195|gb|ELK33969.1| Collagen alpha-6(IV) chain [Myotis davidii]
          Length = 1255

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 91/184 (49%), Gaps = 17/184 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKG---------EIGAKGEMGVKGERGEKGAPG----- 143
            + G    T    PPG  GP G KG         + G  G++G  G  G KG PG     
Sbjct: 343 GIDGLPGKTGLPGPPGFTGPRGDKGLPGFPGLPGKDGLPGKVGNPGLPGSKGVPGDIFGA 402

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            +G PG QG+ G  G RG  GD G PGP+G+PG  G  GPKG+ G PG     G  G PG
Sbjct: 403 EIGAPGEQGLQGLPGDRGFPGDSGLPGPKGLPGKSGLLGPKGEQGSPGT---PGHVGQPG 459

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            PG  G+P   G  G+PG  G PG  G PG  G  GE G     G RG  G+ G+PG+P 
Sbjct: 460 IPGTVGLPSVKGKPGLPGAPGFPGTSGHPGKKGPKGETGPPASTGKRGLPGLKGLPGSPG 519

Query: 264 ICAY 267
           +  +
Sbjct: 520 LIGF 523



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 91/186 (48%), Gaps = 48/186 (25%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG------PQGIPG 176
           EIGA GE G++G  G++G PG  G PGP+G+PG  G  GPKG+ G PG        GIPG
Sbjct: 403 EIGAPGEQGLQGLPGDRGFPGDSGLPGPKGLPGKSGLLGPKGEQGSPGTPGHVGQPGIPG 462

Query: 177 ------------------------DEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGL-- 207
                                     GK+GPKG+ G P   G+ GL G  GLPG PGL  
Sbjct: 463 TVGLPSVKGKPGLPGAPGFPGTSGHPGKKGPKGETGPPASTGKRGLPGLKGLPGSPGLIG 522

Query: 208 ----DGIPGRNGMDGIPGKD---------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                G+PG  G+ G+PG           G PG  G+PG  G NG KG+ G  G  G SG
Sbjct: 523 FLGNSGLPGDTGLPGLPGPKGEKGSVGLIGFPGMPGLPGIFGANGLKGIPGLAGKMGPSG 582

Query: 255 INGVPG 260
             G PG
Sbjct: 583 RAGSPG 588



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 96/233 (41%), Gaps = 81/233 (34%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEK------GAPGVVGPPGPQGI------------- 153
           G QGP G  G  G +G  G KGE+GE       G PG  G PGPQG+             
Sbjct: 228 GTQGPSGSPGLFGPQGPTGPKGEKGESTLSTRSGKPGEQGDPGPQGLSGETGIPGKDGLP 287

Query: 154 -------------------------PGDEG-----------------KRGPKGDMG---Y 168
                                    PG++G                  RG  GD G    
Sbjct: 288 GLLGLPGFPGDAGQGFPGEKGFPGLPGEKGHSGSPGPPGIGLPGSPGPRGLSGDKGIDGL 347

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLD--------------GIP 211
           PG  G+PG  G  GP+GD G PG  GL G+DGLPG+   PGL               G P
Sbjct: 348 PGKTGLPGPPGFTGPRGDKGLPGFPGLPGKDGLPGKVGNPGLPGSKGVPGDIFGAEIGAP 407

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G+ G+PG  G PG  G+PG  G  G+ G+ GP+G +G  G  G  G P I
Sbjct: 408 GEQGLQGLPGDRGFPGDSGLPGPKGLPGKSGLLGPKGEQGSPGTPGHVGQPGI 460



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 100/203 (49%), Gaps = 37/203 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L    GF  ++     PG +GP G+ G   + G+ G+ G +G  G+PG++G  G  G+PG
Sbjct: 475 LPGAPGFPGTSGH---PGKKGPKGETGPPASTGKRGLPGLKGLPGSPGLIGFLGNSGLPG 531

Query: 156 D---EGKRGPKGD------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE-- 204
           D    G  GPKG+      +G+PG  G+PG  G  G KG  G  G++G  GR G PGE  
Sbjct: 532 DTGLPGLPGPKGEKGSVGLIGFPGMPGLPGIFGANGLKGIPGLAGKMGPSGRAGSPGEKG 591

Query: 205 ----PGLDGIP------------------GRNGMDGIPGKDGLPGKD-GIPGTNGTNGEK 241
               PG  GIP                  G  G+DG  G  G  G+  G+PG+ G  GE 
Sbjct: 592 DRGDPGPVGIPSLRPPMLNLQFKGDKGSQGSAGLDGFSGPRGDQGQTLGLPGSPGPKGEP 651

Query: 242 GMTGPRGNRGKSGINGVPGTPAI 264
           G  G +G +GKSG+ G  G P I
Sbjct: 652 GEPGLKGIKGKSGLVGDLGVPGI 674



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 92/191 (48%), Gaps = 37/191 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G+ G KGE G     G++G PG+      +G+PG  G  G  G+ G PG 
Sbjct: 479 PGFPGTSGHPGKKGPKGETGPPASTGKRGLPGL------KGLPGSPGLIGFLGNSGLPGD 532

Query: 172 QGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-- 223
            G+PG  G +G KG +G       PG  G+ G +GL G PGL G  G +G  G PG+   
Sbjct: 533 TGLPGLPGPKGEKGSVGLIGFPGMPGLPGIFGANGLKGIPGLAGKMGPSGRAGSPGEKGD 592

Query: 224 -GLPGKDGIP---------------GTNGTNGEKGMTGPRGNRGKS-------GINGVPG 260
            G PG  GIP               G+ G+ G  G +GPRG++G++       G  G PG
Sbjct: 593 RGDPGPVGIPSLRPPMLNLQFKGDKGSQGSAGLDGFSGPRGDQGQTLGLPGSPGPKGEPG 652

Query: 261 TPAICAYKRES 271
            P +   K +S
Sbjct: 653 EPGLKGIKGKS 663



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 77/144 (53%), Gaps = 15/144 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G+ G  GA G  G  G  G+KG  G  GPP   G +G+PG +G  G  G +G+ G  G+P
Sbjct: 471 GKPGLPGAPGFPGTSGHPGKKGPKGETGPPASTGKRGLPGLKGLPGSPGLIGFLGNSGLP 530

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           GD G  G  G  G  G +GL    G PG PGL GI G NG+ GIP   GL GK G  G  
Sbjct: 531 GDTGLPGLPGPKGEKGSVGL---IGFPGMPGLPGIFGANGLKGIP---GLAGKMGPSGRA 584

Query: 236 GTNGEKGMTGPRGNRGKSGINGVP 259
           G+ GEK      G+RG  G  G+P
Sbjct: 585 GSPGEK------GDRGDPGPVGIP 602



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 79/179 (44%), Gaps = 64/179 (35%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGDMGYPGPQGIPGDE 178
           GA+G+ G KG +G  G+PG+ GP GP G  G++G      + G  G+ G PGPQG+ G+ 
Sbjct: 219 GARGDPGSKGTQGPSGSPGLFGPQGPTGPKGEKGESTLSTRSGKPGEQGDPGPQGLSGE- 277

Query: 179 GKRGPKGDMGYPGRIGLDGRD-----------------GLPGEPGLDGIPGRN------- 214
                          G+ G+D                 G PGE G  G+PG         
Sbjct: 278 --------------TGIPGKDGLPGLLGLPGFPGDAGQGFPGEKGFPGLPGEKGHSGSPG 323

Query: 215 -------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                        G+ G  G DGLPGK G+PG        G TGPRG++G  G  G+PG
Sbjct: 324 PPGIGLPGSPGPRGLSGDKGIDGLPGKTGLPGP------PGFTGPRGDKGLPGFPGLPG 376



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 73/147 (49%), Gaps = 31/147 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGP------------QGIPGD 156
            PG+ GP G KG+ G  G  G+ GE G+KG    PG +G PG             +G  G 
Sbjct: 861  PGIPGPKGPKGDEGIPGFSGLPGELGQKGMRGEPGFMGMPGKVGPPGDPGFPGMKGKAGR 920

Query: 157  EGKRGPKGDMGY----------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             G  GP+G  G           PGP G+PG +G  G  GD G  G IGL G  GLP    
Sbjct: 921  RGFSGPQGAPGQTPIAEAIQAPPGPMGLPGMDGIPGLTGDPGVQGPIGLQGSKGLP---- 976

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPG 233
              GIPG++G+ G+PG  G  G  G+PG
Sbjct: 977  --GIPGKDGLSGLPGPPGALGDPGLPG 1001



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 83/166 (50%), Gaps = 29/166 (17%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAP-GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG- 176
           G KG  G+ G  G  G RG++G   G+ G PGP+G PG+ G +G KG  G  G  G+PG 
Sbjct: 615 GDKGSQGSAGLDGFSGPRGDQGQTLGLPGSPGPKGEPGEPGLKGIKGKSGLVGDLGVPGI 674

Query: 177 --DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------------------------GI 210
             ++GK G  GD+G PG  G+ G   + G+PGL                         GI
Sbjct: 675 KGEDGKVGIPGDVGLPGSPGIPGIAAIKGDPGLPGSPGHPGSPGPLGPPGLIGTKGYPGI 734

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G +G++G+PG  G  G  G P   G  G  G+ GP+G +G  GI+
Sbjct: 735 LGLHGLNGLPGTKGTHGTPG-PSITGVPGPAGLPGPKGEKGSPGID 779



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 29/158 (18%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV------------KGERGEKGAPGVV 145
            ++G      +  P G  G  G+KG+ G  G +G+            KG++G +G+ G+ 
Sbjct: 567 GLKGIPGLAGKMGPSGRAGSPGEKGDRGDPGPVGIPSLRPPMLNLQFKGDKGSQGSAGL- 625

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
                      +G  GP+GD G     G+PG     GPKG+ G PG  G+ G+ GL G+ 
Sbjct: 626 -----------DGFSGPRGDQGQ--TLGLPGSP---GPKGEPGEPGLKGIKGKSGLVGDL 669

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           G+ GI G +G  GIPG  GLPG  GIPG     G+ G+
Sbjct: 670 GVPGIKGEDGKVGIPGDVGLPGSPGIPGIAAIKGDPGL 707



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 66/145 (45%), Gaps = 43/145 (29%)

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---GRDGLPGEPGLDGIPGR-------- 213
           + G PG  G PG  G +GPKGD G PG  GL    G+ G+ GEPG  G+PG+        
Sbjct: 851 NQGDPGDPGFPGIPGPKGPKGDEGIPGFSGLPGELGQKGMRGEPGFMGMPGKVGPPGDPG 910

Query: 214 -------------NGMDGIPGKD-------------GLPGKDGIPGTNGTNGEKGMTGPR 247
                        +G  G PG+              GLPG DGIPG  G  G +G  G +
Sbjct: 911 FPGMKGKAGRRGFSGPQGAPGQTPIAEAIQAPPGPMGLPGMDGIPGLTGDPGVQGPIGLQ 970

Query: 248 GNR------GKSGINGVPGTPAICA 266
           G++      GK G++G+PG P    
Sbjct: 971 GSKGLPGIPGKDGLSGLPGPPGALG 995



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 63/157 (40%), Gaps = 55/157 (35%)

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDE---------------GKRGPKGDMGYPGRI-- 193
            QG PGD G  G       PGP+G  GDE               G RG  G MG PG++  
Sbjct: 852  QGDPGDPGFPG------IPGPKGPKGDEGIPGFSGLPGELGQKGMRGEPGFMGMPGKVGP 905

Query: 194  ----------------GLDGRDGLPGE----------------PGLDGIPGRNGMDGIPG 221
                            G  G  G PG+                PG+DGIPG  G  G+ G
Sbjct: 906  PGDPGFPGMKGKAGRRGFSGPQGAPGQTPIAEAIQAPPGPMGLPGMDGIPGLTGDPGVQG 965

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
              GL G  G+PG  G +G  G+ GP G  G  G+ G+
Sbjct: 966  PIGLQGSKGLPGIPGKDGLSGLPGPPGALGDPGLPGL 1002



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 75/165 (45%), Gaps = 48/165 (29%)

Query: 132 VKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
             GE+GEKG PG+ GP GP   +G+ G  G +G KG +G PGP              D+ 
Sbjct: 43  TAGEKGEKGIPGLPGPRGPMGLEGVQGPPGSQGEKGGVGLPGP--------------DV- 87

Query: 189 YPGRIGLDGR--DGLPGEPGLDGIPGRNGMDGIPGK-----DGLPGKDGI---------- 231
               I  DG    G+ G+PG  G+PG  G  G PG+      GLPGKDG+          
Sbjct: 88  ---YIDTDGAVISGVSGDPGPQGVPGLKGNKGNPGQTTVGAAGLPGKDGLPGPPGLPGLP 144

Query: 232 --------PGT--NGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                   PGT  +   G  G+ G RG +G  G+ GV G    CA
Sbjct: 145 GSPGPAFEPGTLQSTEPGFPGLRGERGPKGNQGLKGVKGDSGFCA 189



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 68/148 (45%), Gaps = 31/148 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGD 165
           PG  GP G+ GE G KG  G  G  G+ G PG+      VG PG  G+PG          
Sbjct: 642 PGSPGPKGEPGEPGLKGIKGKSGLVGDLGVPGIKGEDGKVGIPGDVGLPGSP-------- 693

Query: 166 MGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G PG   I GD G                 G  G  GYPG +GL G +GLPG  G  G 
Sbjct: 694 -GIPGIAAIKGDPGLPGSPGHPGSPGPLGPPGLIGTKGYPGILGLHGLNGLPGTKGTHGT 752

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           PG + + G+PG  GLPG  G  G+ G +
Sbjct: 753 PGPS-ITGVPGPAGLPGPKGEKGSPGID 779


>gi|119607820|gb|EAW87414.1| collagen, type XXVII, alpha 1, isoform CRA_d [Homo sapiens]
          Length = 1860

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 93/167 (55%), Gaps = 16/167 (9%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G+PGP+G  G EG +G +G  G 
Sbjct: 1354 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGA 1413

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
            PGR G+ G  GLPG     G+ GR G++GI G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 1414 PGRRGVQGLQGLPGP---RGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 1470

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
             G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 1471 AGKRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1510



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 104/239 (43%), Gaps = 41/239 (17%)

Query: 43   DKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGF 102
            D+GD  +   P  P  E V     + +R +  +Q    H  P  W             G 
Sbjct: 1353 DRGDRGEPGDPGYPGQEGV-----QGLRGKPGQQGQPGHPGPRGW------------PGP 1395

Query: 103  CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------- 155
              S     P G QG  G  G  G +G  G+ G RG  G  G+ G  GP G+PG       
Sbjct: 1396 KGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQ 1455

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRDGL 201
                    D G  GP G  G PG  G+PG +G  G KG+ G PG++      G +GR GL
Sbjct: 1456 QGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGL 1515

Query: 202  P---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            P   GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G
Sbjct: 1516 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVG 1574



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 87/162 (53%), Gaps = 21/162 (12%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYPGPQGI 174
           K   GAKG+MG+ G  G  G PG  G    PGP G PG++G+ GP+G     GYPG QG+
Sbjct: 684 KAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGL 743

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G+PG  G+ G+ G PG 
Sbjct: 744 PGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGL 803

Query: 235 NGTNGEK---------------GMTGPRGNRGKSGINGVPGT 261
           +G  GE                G+ GP G  G  G+ G+ G+
Sbjct: 804 DGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGS 845



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 85/176 (48%), Gaps = 18/176 (10%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP G  G  G+KG  G KG++G+ GAPG  G  G QG+PG  
Sbjct: 1370 GVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPR 1429

Query: 158  GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G +G  G  GP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 1430 GVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1489

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G  G+PG+    G PGK G  G+ G+PG  G  G KG  G  G  G  G+ G+
Sbjct: 1490 GFKGESGLPGQL---GPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGL 1542



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/141 (44%), Positives = 79/141 (56%), Gaps = 12/141 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG +GPPG         KRG +G  G 
Sbjct: 1465 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGRTGL 1515

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 1516 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGP 1575

Query: 229  DGIPGTNGTNGEKGMTGPRGN 249
             GI G +G  G KG  G RG+
Sbjct: 1576 LGILGPSGLPGPKGDKGSRGD 1596



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 90/178 (50%), Gaps = 33/178 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
            G +G  G  G  G +G  G++G+ G++G PG  GP   PGP+G  G EG +G +G  G P
Sbjct: 1355 GDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAP 1414

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------------------- 204
            G +G+ G +G  GP+G +G  G  G+ G DGLPG                          
Sbjct: 1415 GRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKR 1474

Query: 205  --PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              PG+ G+PG  G  G  G+ GLPG+ G PG  GT G  G+    GN+G+ G  G PG
Sbjct: 1475 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLP---GNQGEPGSKGQPG 1529



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 94/189 (49%), Gaps = 42/189 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KG +G+ GE G+KG++GE+G PGV       G PG +G +G +G  G+PG +
Sbjct: 832  GYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGV------SGDPGFQGDKGSQGLPGFPGAR 885

Query: 173  GIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-- 215
            G PG  GK G KG               D+G PG    +G +G+ G+PG  G+PG  G  
Sbjct: 886  GKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGD---NGPEGMKGKPGARGLPGPRGQL 942

Query: 216  ----------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                            ++G PG+ G PG+ G+ G  G  G+ G  GP G +G  G  G+ 
Sbjct: 943  GPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIGLV 1002

Query: 260  GTPAICAYK 268
            G P I   K
Sbjct: 1003 GEPGIVGEK 1011



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 76/144 (52%), Gaps = 12/144 (8%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++G
Sbjct: 674 QKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQG 724

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 725 QPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 784

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G RG  G++G PG
Sbjct: 785 KMGMPGFPGVFGERGPPGLDGNPG 808



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 702 PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGL 761

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN----------- 214
           PG  G+PG +G+RG  G  G  G++G+ G  G+ GE   PGLDG PG             
Sbjct: 762 PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGL 821

Query: 215 -GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G PG  G+ G  G+ GE G+ G +G +G  G++G PG
Sbjct: 822 IGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 868



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 83/187 (44%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPK--------- 163
           GP G +G IG  G  G+ G  GE+G PGV G  G  G+PG     G+RGP          
Sbjct: 751 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGEL 810

Query: 164 ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                       GD+G  GP G PG +G +G  G +G PG  G  G  G+P   G+PG  
Sbjct: 811 GLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQ 870

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKS 253
           G  G  G+ G PG  G PG  G  G  G+                G  G  GP G +GK 
Sbjct: 871 GDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 930

Query: 254 GINGVPG 260
           G  G+PG
Sbjct: 931 GARGLPG 937



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 90/240 (37%), Gaps = 82/240 (34%)

Query: 100  QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------- 146
            QG      E   PGL+G   P+G  G  G +G+ G  GE GEKG  G++G          
Sbjct: 1179 QGLIGQRGE---PGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGV 1235

Query: 147  -----PPGPQGIPGDEGKRGPKGDMGYP---------------------------GPQGI 174
                 P G  G  G++G+ G KG  GY                            GP G 
Sbjct: 1236 TGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGA 1295

Query: 175  PGDEGKRGPKGDMGYPGRIGL---------------DGRDGLP----------------- 202
            PG  G +G  G  GY G  G+                G DG                   
Sbjct: 1296 PGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRG 1355

Query: 203  --GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              GEPG  G PG+ G+ G+ GK G  G+ G PG  G  G KG  G  G +GK G  G PG
Sbjct: 1356 DRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPG 1415



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 71/174 (40%), Gaps = 60/174 (34%)

Query: 144 VVGPPGPQG------------------------------------------IPGDEG--- 158
           ++GPPGP+G                                            GD G   
Sbjct: 623 LMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSP 682

Query: 159 ---KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPG 212
                G KGDMG PG  G PG  G+   KG  GYPG  G  G  G P   G PG  G PG
Sbjct: 683 GKAHDGAKGDMGLPGLSGNPGPPGR---KGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPG 739

Query: 213 RNGMDGI---PGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           R G+ G    PG  G  G  G+P   G  G++GE+G+ G  G RGK G+ G PG
Sbjct: 740 RQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPG 793



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 68/159 (42%), Gaps = 39/159 (24%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 1158 PGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGE 1217

Query: 169  PGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEP-------- 205
             G +G+ G+               EGK G +G+ G  G  G  G  G  GE         
Sbjct: 1218 KGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGP 1277

Query: 206  -------------GLDGIPGRNGMDGIPGKDGLPGKDGI 231
                         G  G PGR G  G PG  G  G  GI
Sbjct: 1278 PGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGI 1316



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 30/143 (20%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  GA GE G+ GE G KG  G      P G PG++G  G +G+         PG 
Sbjct: 1146 MGPKGPPGAVGEPGLPGEAGMKGDLG------PLGTPGEQGLIGQRGE---------PGL 1190

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GI 231
            EG  GP         +G DG  G  G+PG DG  G  G +G+ G+DG PG        G 
Sbjct: 1191 EGDSGP---------MGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGP 1241

Query: 232  PGTNGTNGEKGMTGPRGNRGKSG 254
             G +G  GEKG TG +G +G  G
Sbjct: 1242 EGKSGKQGEKGRTGAKGAKGYQG 1264



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 18/105 (17%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKG---------APGVVGPPGPQGIPGDEGKRG 161
            PPG  GP G KG+ GA+G  G +G+ G +G         APG+ G PG +G PG  G  G
Sbjct: 917  PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDG 976

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             KG+         PGD G+ GP G+ G+ G IGL G  G+ GE G
Sbjct: 977  VKGE---------PGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKG 1012


>gi|339246491|ref|XP_003374879.1| collagen alpha-2(IV) chain [Trichinella spiralis]
 gi|316971850|gb|EFV55577.1| collagen alpha-2(IV) chain [Trichinella spiralis]
          Length = 1632

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/151 (49%), Positives = 85/151 (56%), Gaps = 12/151 (7%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L    GF     E   PG+ GP G KGE G  G   + G  G  GAPG    PGP+G PG
Sbjct: 797 LPGTPGFQGLKGESGLPGIPGPAGLKGEPGMPG---LPGSPGTVGAPGF---PGPKGNPG 850

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G  GPKGD+G PG +G PG +G+RG  G  GYPG  G  G  GLPG+PGLDG+PG  G
Sbjct: 851 FPGLAGPKGDIGLPGLEGFPGQKGQRGLDGQPGYPGEKGDQGLPGLPGKPGLDGLPGIKG 910

Query: 216 MDGIPGKDGLPGKDGIPGT---NGTNGEKGM 243
             G P   GLPG  G PG    +G  GEKGM
Sbjct: 911 DRGFP---GLPGDKGEPGPAARDGPRGEKGM 938



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 90/173 (52%), Gaps = 25/173 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + GF     E   PGL GP G  GE G  G  G++GE+G  G PG  G PG  G PG+ 
Sbjct: 1023 GLDGFPGQKGEPGFPGLAGPPGLPGEKGRMGVPGIRGEKGLDGLPGRPGQPGAAGFPGE- 1081

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
                 KGD G P   G+PG  G  G KGD G+PG  G  G  GL   PGLDG PG+ G  
Sbjct: 1082 -----KGDAGLP---GMPGAPGFTGAKGDAGFPGLPGAKGDRGL---PGLDGFPGQAGQK 1130

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G PG  GLPG+          G+ G  GP+G R   G++G+PG P I  YK E
Sbjct: 1131 GEPGLPGLPGQ---------QGQDGFPGPKGER---GLDGLPGAPGI-GYKGE 1170



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/190 (42%), Positives = 98/190 (51%), Gaps = 15/190 (7%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGE---IGAKGEMGV-----------KGERGEKGA 141
            L  + GF     +   PGL G  GQ+G+    G KGE G+           KGERGE G 
Sbjct: 1117 LPGLDGFPGQAGQKGEPGLPGLPGQQGQDGFPGPKGERGLDGLPGAPGIGYKGERGEPGL 1176

Query: 142  PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            PG+ G  G  G PG +G+RG  G  G PGP+G PG  G  G KG+ G PG  G  GRDG 
Sbjct: 1177 PGLPGK-GLPGFPGTKGERGLDGLPGLPGPKGAPGYPGTPGQKGEPGLPGLPGERGRDGF 1235

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG  G  G+PG  G  G PG  G+ GK G+PG  G  G  G+ G  G +G  G+ G PG 
Sbjct: 1236 PGPKGDAGLPGLPGAIGEPGYPGIDGKPGLPGIPGAKGMAGIPGFPGLKGDPGLPGSPGA 1295

Query: 262  PAICAYKRES 271
            P     K ++
Sbjct: 1296 PGFPGTKGDA 1305



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/142 (49%), Positives = 78/142 (54%), Gaps = 9/142 (6%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G  G KG MGV G RGEKG PG  G PG  G+PG       KGD G+PG   IPG E
Sbjct: 739 GAPGMPGLKGRMGVPGIRGEKGEPGAAGLPGVPGLPGL------KGDQGFPG---IPGKE 789

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G  G  G  G PG  GL G  GLPG PG  G+ G  GM G+PG  G  G  G PG  G  
Sbjct: 790 GLPGAPGLPGTPGFQGLKGESGLPGIPGPAGLKGEPGMPGLPGSPGTVGAPGFPGPKGNP 849

Query: 239 GEKGMTGPRGNRGKSGINGVPG 260
           G  G+ GP+G+ G  G+ G PG
Sbjct: 850 GFPGLAGPKGDIGLPGLEGFPG 871



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 78/144 (54%), Gaps = 3/144 (2%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
            +G  G  G KGE G  GAPG+ G PGP+G  G  G  G KGD GYPG  G PG +G  G 
Sbjct: 968  VGLPGYPGPKGEPGFPGAPGLSGIPGPKGSMGLPGFPGEKGDAGYPGAPGAPGVKGLDGF 1027

Query: 184  KGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
             G  G PG  GL G  GLPGE G  G+P   G  G+DG+PG+ G PG  G PG  G  G 
Sbjct: 1028 PGQKGEPGFPGLAGPPGLPGEKGRMGVPGIRGEKGLDGLPGRPGQPGAAGFPGEKGDAGL 1087

Query: 241  KGMTGPRGNRGKSGINGVPGTPAI 264
             GM G  G  G  G  G PG P  
Sbjct: 1088 PGMPGAPGFTGAKGDAGFPGLPGA 1111



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 93/189 (49%), Gaps = 9/189 (4%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V + G+     E   PG  G  G  G  G KG MG+ G  GEKG  G  G PG  G+ G 
Sbjct: 968  VGLPGYPGPKGE---PGFPGAPGLSGIPGPKGSMGLPGFPGEKGDAGYPGAPGAPGVKGL 1024

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G  G KG+ G+PG  G PG  G++G  G  G  G  GLDG  G PG+PG  G PG  G 
Sbjct: 1025 DGFPGQKGEPGFPGLAGPPGLPGEKGRMGVPGIRGEKGLDGLPGRPGQPGAAGFPGEKGD 1084

Query: 217  DGIPGKDGLP------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G+PG  G P      G  G PG  G  G++G+ G  G  G++G  G PG P +   + +
Sbjct: 1085 AGLPGMPGAPGFTGAKGDAGFPGLPGAKGDRGLPGLDGFPGQAGQKGEPGLPGLPGQQGQ 1144

Query: 271  SCSLLPNSE 279
                 P  E
Sbjct: 1145 DGFPGPKGE 1153



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 86/155 (55%), Gaps = 15/155 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGY 168
           PG+ G  G  G  G  G  G +G +GE G PG+ GP G +G   +PG  G  G  G  G+
Sbjct: 783 PGIPGKEGLPGAPGLPGTPGFQGLKGESGLPGIPGPAGLKGEPGMPGLPGSPGTVGAPGF 842

Query: 169 PGPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEP---GLDGIPGRNGM 216
           PGP+G PG  G  GPKGD+G P         G+ GLDG+ G PGE    GL G+PG+ G+
Sbjct: 843 PGPKGNPGFPGLAGPKGDIGLPGLEGFPGQKGQRGLDGQPGYPGEKGDQGLPGLPGKPGL 902

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           DG+PG  G  G  G+PG  G  G     GPRG +G
Sbjct: 903 DGLPGIKGDRGFPGLPGDKGEPGPAARDGPRGEKG 937



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/211 (36%), Positives = 97/211 (45%), Gaps = 62/211 (29%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
            PGL+G  GQKG+ G  G+ G  GE+G++G PG+ G PG  G+PG +G R           
Sbjct: 864  PGLEGFPGQKGQRGLDGQPGYPGEKGDQGLPGLPGKPGLDGLPGIKGDRGFPGLPGDKGE 923

Query: 161  -------GPKGDM-----------------------------------GYPGPQ------ 172
                   GP+G+                                    GYPGP+      
Sbjct: 924  PGPAARDGPRGEKGMPGLPGLRGLPGPPGPTGPPGFPGPKGDAGVGLPGYPGPKGEPGFP 983

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G PG  G  GPKG MG PG  G  G  G PG P   G PG  G+DG PG+ G PG  G+ 
Sbjct: 984  GAPGLSGIPGPKGSMGLPGFPGEKGDAGYPGAP---GAPGVKGLDGFPGQKGEPGFPGLA 1040

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  GEKG  G  G RG+ G++G+PG P 
Sbjct: 1041 GPPGLPGEKGRMGVPGIRGEKGLDGLPGRPG 1071



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 81/142 (57%), Gaps = 9/142 (6%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGE   +G  G+ G  G KGAPG  G PG +G PG  G  G +G  G+PGP+
Sbjct: 1183 GLPGFPGTKGE---RGLDGLPGLPGPKGAPGYPGTPGQKGEPGLPGLPGERGRDGFPGPK 1239

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGMDGIPGKDGLPGKD 229
               GD G  G  G +G PG  G+DG+ GLPG P   G+ GIPG  G+ G PG  G PG  
Sbjct: 1240 ---GDAGLPGLPGAIGEPGYPGIDGKPGLPGIPGAKGMAGIPGFPGLKGDPGLPGSPGAP 1296

Query: 230  GIPGTNGTNGEKGMTGPRGNRG 251
            G PGT G  G  GM G  G++G
Sbjct: 1297 GFPGTKGDAGFPGMPGVPGSKG 1318



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 82/153 (53%), Gaps = 20/153 (13%)

Query: 125 GAKGEMGVKGERG--------------EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           G  G  G KGE+G               KG PG+ G PG  G+ G  G  G +G+ G PG
Sbjct: 704 GLPGRTGEKGEQGVSVPGLPGPPGFPGFKGEPGLSGAPGMPGLKGRMGVPGIRGEKGEPG 763

Query: 171 PQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL-- 225
             G+PG  G  G KGD G+   PG+ GL G  GLPG PG  G+ G +G+ GIPG  GL  
Sbjct: 764 AAGLPGVPGLPGLKGDQGFPGIPGKEGLPGAPGLPGTPGFQGLKGESGLPGIPGPAGLKG 823

Query: 226 -PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  G+PG+ GT G  G  GP+GN G  G+ G
Sbjct: 824 EPGMPGLPGSPGTVGAPGFPGPKGNPGFPGLAG 856



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 82/153 (53%), Gaps = 3/153 (1%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG++G  G+ G  G  G  G+ G +G++G PG+   PG +G+PG  G  G  G  G  G 
Sbjct: 753 PGIRGEKGEPGAAGLPGVPGLPGLKGDQGFPGI---PGKEGLPGAPGLPGTPGFQGLKGE 809

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G+PG  G  G KG+ G PG  G  G  G PG PG  G PG  G+ G  G  GLPG +G 
Sbjct: 810 SGLPGIPGPAGLKGEPGMPGLPGSPGTVGAPGFPGPKGNPGFPGLAGPKGDIGLPGLEGF 869

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PG  G  G  G  G  G +G  G+ G+PG P +
Sbjct: 870 PGQKGQRGLDGQPGYPGEKGDQGLPGLPGKPGL 902



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 105/271 (38%), Gaps = 108/271 (39%)

Query: 101 GFCNSTKE--YCPPGLQGPIGQKGEI---------------------------------- 124
           GF     E  Y  PGL G  G KGE                                   
Sbjct: 571 GFPGQKGEPGYGLPGLPGLAGAKGEAGFPGLPGSPGLPGPPGPLPKVLDRIPGPPGADGL 630

Query: 125 ----GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG---------- 170
               G KGE G  G +GE+GAPG++G PGP+   G  G  GP+G MG PG          
Sbjct: 631 PGLPGPKGEPGFPGMKGERGAPGLMGLPGPK---GSTGAPGPEGQMGAPGIRGEKGESGF 687

Query: 171 -----------PQGIPGDEGKRGPKGDM-----------------------GYPGRIGLD 196
                        G+PG  G+ G KG+                        G PG  GL 
Sbjct: 688 PGAPGLPGPPGKDGLPGLPGRTGEKGEQGVSVPGLPGPPGFPGFKGEPGLSGAPGMPGLK 747

Query: 197 GR---------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GR                GLPG PGL G+ G  G  GIPGK+GLPG  G+PGT G  G K
Sbjct: 748 GRMGVPGIRGEKGEPGAAGLPGVPGLPGLKGDQGFPGIPGKEGLPGAPGLPGTPGFQGLK 807

Query: 242 ------GMTGPRGNRGKSGINGVPGTPAICA 266
                 G+ GP G +G+ G+ G+PG+P    
Sbjct: 808 GESGLPGIPGPAGLKGEPGMPGLPGSPGTVG 838



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 86/204 (42%), Gaps = 59/204 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G  G KGE G  G +GE+GAPG++G PGP            KG  G PGP
Sbjct: 622 PGPPGADGLPGLPGPKGEPGFPGMKGERGAPGLMGLPGP------------KGSTGAPGP 669

Query: 172 QGIPGDEGKRGPKGDM------------------GYPGRIGLDGRDGL------------ 201
           +G  G  G RG KG+                   G PGR G  G  G+            
Sbjct: 670 EGQMGAPGIRGEKGESGFPGAPGLPGPPGKDGLPGLPGRTGEKGEQGVSVPGLPGPPGFP 729

Query: 202 -----------PGEPGLD---GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                      PG PGL    G+PG  G  G PG  GLP   G+PG  G  G++G  G  
Sbjct: 730 GFKGEPGLSGAPGMPGLKGRMGVPGIRGEKGEPGAAGLP---GVPGLPGLKGDQGFPGIP 786

Query: 248 GNRGKSGINGVPGTPAICAYKRES 271
           G  G  G  G+PGTP     K ES
Sbjct: 787 GKEGLPGAPGLPGTPGFQGLKGES 810



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 74/164 (45%), Gaps = 33/164 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ G  GQ G  GA G +G KGE G  G PG  G  GP G PG       KG+ GY    
Sbjct: 532 GISGLPGQPGLPGAPGALGAKGEPGLPGIPGRPGKDGPTGFPGQ------KGEPGY---- 581

Query: 173 GIPGDEGKRGPKGDMGY-----------------------PGRIGLDGRDGLPGEPGLDG 209
           G+PG  G  G KG+ G+                       PG  G DG  GLPG  G  G
Sbjct: 582 GLPGLPGLAGAKGEAGFPGLPGSPGLPGPPGPLPKVLDRIPGPPGADGLPGLPGPKGEPG 641

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            PG  G  G PG  GLPG  G  G  G  G+ G  G RG +G+S
Sbjct: 642 FPGMKGERGAPGLMGLPGPKGSTGAPGPEGQMGAPGIRGEKGES 685



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 57/121 (47%), Gaps = 29/121 (23%)

Query: 170 GPQGIPGDEGKRGPKGD-------------------MGYPGRIGLDGRDGLPGEPGLDGI 210
           GP G+PG +G++G KGD                    GYPG  G  G  GLPG+PGL G 
Sbjct: 486 GPPGLPGKDGEKGAKGDSFRADLVYGPPGPVGPKGDPGYPGIPGEKGISGLPGQPGLPGA 545

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           PG  G  G PG  G+PG+ G  G  G  G+KG  G           G+PG P +   K E
Sbjct: 546 PGALGAKGEPGLPGIPGRPGKDGPTGFPGQKGEPG----------YGLPGLPGLAGAKGE 595

Query: 271 S 271
           +
Sbjct: 596 A 596



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 3/67 (4%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GP GIPG +G+   KGD G  G +G PG+ G+ G +G  G PG  G+ G  GL G PGLD
Sbjct: 199 GPPGIPGQKGE---KGDPGQTGERGFPGEAGRHGKEGRPGLPGPHGMKGDRGLDGYPGLD 255

Query: 209 GIPGRNG 215
           G+ GR+G
Sbjct: 256 GVQGRDG 262



 Score = 43.1 bits (100), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 31/98 (31%)

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
           +GAPG+ G  G  G+PG  G+RGP    GYPG         + GPK              
Sbjct: 328 EGAPGIKGEKGDAGLPGIPGERGP---TGYPG---------QMGPK-------------- 361

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
               GEPG+ G+PG++ + G PGKDGLPG +G+PG  G
Sbjct: 362 ----GEPGMSGVPGQS-IPGPPGKDGLPGLNGLPGKKG 394



 Score = 39.7 bits (91), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 64/144 (44%), Gaps = 29/144 (20%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              + G   +  E   PG+ G  G  G  GAKG  G+ G  G KG PG+ G PG  G PG 
Sbjct: 1242 AGLPGLPGAIGEPGYPGIDGKPGLPGIPGAKGMAGIPGFPGLKGDPGLPGSPGAPGFPGT 1301

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG--------YPGRIGLDGR---------- 198
                  KGD G+PG  G+PG +G +G  G MG         PG  GL G           
Sbjct: 1302 ------KGDAGFPGMPGVPGSKGDKGQMGPMGPPGPSPIVQPGPPGLPGERGPPGLPGLP 1355

Query: 199  -----DGLPGEPGLDGIPGRNGMD 217
                 DGLPG PG  G PG  G D
Sbjct: 1356 GPPGMDGLPGFPGQKGEPGAMGSD 1379


>gi|383858944|ref|XP_003704959.1| PREDICTED: collagen alpha-1(XI) chain-like [Megachile rotundata]
          Length = 1787

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/160 (44%), Positives = 85/160 (53%), Gaps = 15/160 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG---DMGYP 169
           G +G  G  GE G KGE G +GE+G+ GA G  G  GPQGIPG EG  GPKG     G  
Sbjct: 743 GDEGKRGSPGERGDKGERGAEGEKGDTGAKGEPGSSGPQGIPGLEGLEGPKGFEGPRGER 802

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP--- 226
           G  G PG++GK GP G +GYPG IG  G  G PG  G  G  G  G +G PG+ G P   
Sbjct: 803 GATGPPGEKGKTGPPGFVGYPGNIGEKGDKGQPGREGFAGDKGERGNNGAPGERGEPGPR 862

Query: 227 ---------GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                    G +G+PG  G  G+ G  G +G  G  G+ G
Sbjct: 863 GFRGARGRRGAEGLPGPKGDTGQPGPPGSQGEPGPPGVEG 902



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 83/158 (52%), Gaps = 27/158 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGD 165
           PG  G  G KG+ G +G  G KGERG  GAPG  G PGP+G  G       EG  GPKGD
Sbjct: 823 PGNIGEKGDKGQPGREGFAGDKGERGNNGAPGERGEPGPRGFRGARGRRGAEGLPGPKGD 882

Query: 166 MGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN-------- 214
            G PGP   QG PG  G  GP+G +G PG+ GLDG+DG+ G PG  G  G +        
Sbjct: 883 TGQPGPPGSQGEPGPPGVEGPRGFVGPPGQAGLDGKDGITGPPGERGPAGDSGPQGPPGA 942

Query: 215 ----------GMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                     G  G PG+ G PG  GIPG  G  GE+G
Sbjct: 943 PGVIGPQGPAGEPGQPGEPGNPGNPGIPGETGPPGEQG 980



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 86/185 (46%), Gaps = 24/185 (12%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G   S  E    G +G  G+KG+ GAKGE G  G +G  G  G+ GP G +G  G+ G 
Sbjct: 745 EGKRGSPGERGDKGERGAEGEKGDTGAKGEPGSSGPQGIPGLEGLEGPKGFEGPRGERGA 804

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD------GRDGLPGEPG------- 206
            GP G+ G  GP G  G  G  G KGD G PGR G        G +G PGE G       
Sbjct: 805 TGPPGEKGKTGPPGFVGYPGNIGEKGDKGQPGREGFAGDKGERGNNGAPGERGEPGPRGF 864

Query: 207 --------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                    +G+PG  G  G PG    PG  G PG  G  G +G  GP G  G  G +G+
Sbjct: 865 RGARGRRGAEGLPGPKGDTGQPGP---PGSQGEPGPPGVEGPRGFVGPPGQAGLDGKDGI 921

Query: 259 PGTPA 263
            G P 
Sbjct: 922 TGPPG 926



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 82/154 (53%), Gaps = 18/154 (11%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGP------------QGIPGDEGKRGPKGDMGYPGPQGI 174
           +G +G  G  G +G PG+ G PG              G+ G++G +GP+G +G+PG +G+
Sbjct: 682 QGVLGPTGLVGPQGKPGIPGLPGADGPPGHPGNPGAPGMKGEQGLQGPQGPIGFPGVRGV 741

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
            GDEGKRG  G+ G  G  G +G  G   + G  G PG +G  GIPG +GL G  G    
Sbjct: 742 KGDEGKRGSPGERGDKGERGAEGEKG---DTGAKGEPGSSGPQGIPGLEGLEGPKGF--- 795

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  GE+G TGP G +GK+G  G  G P     K
Sbjct: 796 EGPRGERGATGPPGEKGKTGPPGFVGYPGNIGEK 829



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 90/209 (43%), Gaps = 54/209 (25%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              +G   S+     PGL+G  G KG  G +GE G  G  GEKG     GPPG  G PG+
Sbjct: 769 TGAKGEPGSSGPQGIPGLEGLEGPKGFEGPRGERGATGPPGEKGK---TGPPGFVGYPGN 825

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKR------------------------------GPKGD 186
            G+   KGD G PG +G  GD+G+R                              GPKGD
Sbjct: 826 IGE---KGDKGQPGREGFAGDKGERGNNGAPGERGEPGPRGFRGARGRRGAEGLPGPKGD 882

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG---- 242
            G PG  G        GEPG  G+ G  G  G PG+ GL GKDGI G  G  G  G    
Sbjct: 883 TGQPGPPGSQ------GEPGPPGVEGPRGFVGPPGQAGLDGKDGITGPPGERGPAGDSGP 936

Query: 243 --------MTGPRGNRGKSGINGVPGTPA 263
                   + GP+G  G+ G  G PG P 
Sbjct: 937 QGPPGAPGVIGPQGPAGEPGQPGEPGNPG 965



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 91/228 (39%), Gaps = 78/228 (34%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR--------------- 160
           GP G KGE G  G  G+ G++GE+G PG  G PG   +PG EG +               
Sbjct: 569 GPPGMKGEQGVPGLPGLPGDKGERGPPGATGEPG---LPGHEGMQGDDGPPGLPGLPGEM 625

Query: 161 ------GPKGDMGYPGPQGIPGDEGKRGPKGD---------------------------M 187
                 GP+G  G PG  GIPG EG  G KG+                           +
Sbjct: 626 GPRGFIGPRGFPGLPGNPGIPGSEGPPGAKGNTGPPGSSGSPGPPGPAGPAGPPGPQGVL 685

Query: 188 GYPGRIGLDGRDGLPGEPGLD---------------------------GIPGRNGMDGIP 220
           G  G +G  G+ G+PG PG D                           G PG  G+ G  
Sbjct: 686 GPTGLVGPQGKPGIPGLPGADGPPGHPGNPGAPGMKGEQGLQGPQGPIGFPGVRGVKGDE 745

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           GK G PG+ G  G  G  GEKG TG +G  G SG  G+PG   +   K
Sbjct: 746 GKRGSPGERGDKGERGAEGEKGDTGAKGEPGSSGPQGIPGLEGLEGPK 793



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 84/163 (51%), Gaps = 18/163 (11%)

Query: 111  PPGLQGPIG---QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KG 164
            P GLQG  G   +KG+ G  G  G +G  G++G PG  G PG +G+PG  G+ GP    G
Sbjct: 1344 PAGLQGSPGMPGEKGDTGLPGAPGPQGRIGDQGLPGPAGLPGLRGLPGLAGENGPPGMTG 1403

Query: 165  DMGYPG------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             +G PG      P+G  GD GKRG KG  G  G IGL G  G  GE G  G  G  G  G
Sbjct: 1404 AVGVPGKAGPVGPKGQKGDRGKRGIKGHRGELGHIGLKGEQGEKGEQGPRGATGPEGPKG 1463

Query: 219  IPGKDGLPGKDG------IPGTNGTNGEKGMTGPRGNRGKSGI 255
              G  GL G  G      +PG  G +G KG  G  G +G++G+
Sbjct: 1464 NQGPVGLTGMKGNEGPPGLPGMEGPSGPKGNAGNDGPKGEAGL 1506



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 80/170 (47%), Gaps = 51/170 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA------------------PGVVGPPGPQGI 153
            PG  GP+G  GE G KG++G  GE+G KG+                  PG +G PG +G 
Sbjct: 1090 PGSPGPVGVPGEDGDKGDIGPPGEKGFKGSQGEMGPPGPPGLQGIRGEPGAIGLPGEKGP 1149

Query: 154  PGDEGKRGPKGD---------------------------------MGYPGPQGIPGDEGK 180
            PG+ G++GPKG+                                 +G  GP G PG++G 
Sbjct: 1150 PGEIGRQGPKGEDGPIGASGPPGPIGPQGLPGPAGLKGEVGDTGTVGPMGPAGSPGEQGP 1209

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            RGPKG  G  G  G +GR G  G+ G+ G+PG +G +G  G+ G PG  G
Sbjct: 1210 RGPKGSEGLQGPPGPEGRQGKKGDAGIPGLPGSSGPEGKSGERGPPGPKG 1259



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 89/214 (41%), Gaps = 69/214 (32%)

Query: 113  GLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPG------------------VV 145
            GLQGP G +G  G KG+ G+         +G+ GE+G PG                  ++
Sbjct: 1217 GLQGPPGPEGRQGKKGDAGIPGLPGSSGPEGKSGERGPPGPKGEEGKSGPPGPPGSRGII 1276

Query: 146  GPPGPQ------------------GIPGDEGKRG------------------------PK 163
            GP GP+                  G+ GD GK G                        P 
Sbjct: 1277 GPEGPKGNAGPPGFPGPPGEPGLAGLKGDPGKDGEDGKPGDPGPPGEIGPPGKEGLPGPP 1336

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G  G  GP G+ G  G  G KGD G PG  G  GR G  G PG  G+PG  G+ G+ G++
Sbjct: 1337 GKQGTEGPAGLQGSPGMPGEKGDTGLPGAPGPQGRIGDQGLPGPAGLPGLRGLPGLAGEN 1396

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG  G  G  G  G  G  G +G+RGK GI G
Sbjct: 1397 GPPGMTGAVGVPGKAGPVGPKGQKGDRGKRGIKG 1430



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 78/235 (33%)

Query: 101  GFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPG------------VV 145
            G   S  E  PPG++GP   +G  G+ G  G+ G+ G  GE+G  G            V+
Sbjct: 887  GPPGSQGEPGPPGVEGPRGFVGPPGQAGLDGKDGITGPPGERGPAGDSGPQGPPGAPGVI 946

Query: 146  GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR------------------------ 181
            GP GP G PG  G+ G  G+ G PG  G PG++GK                         
Sbjct: 947  GPQGPAGEPGQPGEPGNPGNPGIPGETGPPGEQGKEGPPGPLGLPGKDGPPGPSGLPGFP 1006

Query: 182  ------------GPKGDMGYPGRIGLDGRDGLPGEPGLD--------------------- 208
                        G KG++G  G  G  G  G  GEPG D                     
Sbjct: 1007 GERGLSGLPGMPGSKGEIGLTGAPGPAGDKGAQGEPGKDGETGPQGSQGPKGPPGPLGLK 1066

Query: 209  ------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                  G+PG  G DG+PG+ GLPG  G  G  G +G+KG  GP G +G  G  G
Sbjct: 1067 GDRGEPGLPGPTGRDGLPGQRGLPGSPGPVGVPGEDGDKGDIGPPGEKGFKGSQG 1121



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 72/152 (47%), Gaps = 12/152 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGY 168
            PG  GP G+ G+ G  G  G+ G RG  G  G  GPPG     G+PG  G  GPKG    
Sbjct: 1363 PGAPGPQGRIGDQGLPGPAGLPGLRGLPGLAGENGPPGMTGAVGVPGKAGPVGPKGQK-- 1420

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                   GD GKRG KG  G  G IGL G  G  GE G  G  G  G  G  G  GL G 
Sbjct: 1421 -------GDRGKRGIKGHRGELGHIGLKGEQGEKGEQGPRGATGPEGPKGNQGPVGLTGM 1473

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G +G +GP+GN G  G  G  G
Sbjct: 1474 KGNEGPPGLPGMEGPSGPKGNAGNDGPKGEAG 1505



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 79/168 (47%), Gaps = 13/168 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL GP G++G  G  G  G  G  GEKG  G+ G PGPQG           GD G PGP 
Sbjct: 1331 GLPGPPGKQGTEGPAGLQGSPGMPGEKGDTGLPGAPGPQGR---------IGDQGLPGPA 1381

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+PG  G  G  G+ G P   G+ G  G+PG+ G  G  G+ G  G  G  G  G+ G  
Sbjct: 1382 GLPGLRGLPGLAGENGPP---GMTGAVGVPGKAGPVGPKGQKGDRGKRGIKGHRGELGHI 1438

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK-RESCSLLPNSE 279
            G  G  GEKG  GPRG  G  G  G  G   +   K  E    LP  E
Sbjct: 1439 GLKGEQGEKGEQGPRGATGPEGPKGNQGPVGLTGMKGNEGPPGLPGME 1486



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 90/240 (37%), Gaps = 78/240 (32%)

Query: 99   MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------------------VKGERGEKG 140
            +QG          PG +GP G+ G  G KGE G                    G +GE G
Sbjct: 1131 LQGIRGEPGAIGLPGEKGPPGEIGRQGPKGEDGPIGASGPPGPIGPQGLPGPAGLKGEVG 1190

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
              G VGP GP G PG++G RGPKG  G    QG PG EG++G KGD G PG  G  G +G
Sbjct: 1191 DTGTVGPMGPAGSPGEQGPRGPKGSEGL---QGPPGPEGRQGKKGDAGIPGLPGSSGPEG 1247

Query: 201  LPGEPGLDGIPGRN---------------------------------------GMDGIPG 221
              GE G  G  G                                         G+ G PG
Sbjct: 1248 KSGERGPPGPKGEEGKSGPPGPPGSRGIIGPEGPKGNAGPPGFPGPPGEPGLAGLKGDPG 1307

Query: 222  KDG------------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            KDG                    G  G PG  GT G  G+ G  G  G+ G  G+PG P 
Sbjct: 1308 KDGEDGKPGDPGPPGEIGPPGKEGLPGPPGKQGTEGPAGLQGSPGMPGEKGDTGLPGAPG 1367



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 87/208 (41%), Gaps = 60/208 (28%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQG---------IPGDEGKR 160
            GL+G +G  G +G  G  G  GE   RG KG+ G+ GPPGP+G         IPG  G  
Sbjct: 1184 GLKGEVGDTGTVGPMGPAGSPGEQGPRGPKGSEGLQGPPGPEGRQGKKGDAGIPGLPGSS 1243

Query: 161  GPKGDMGYPGPQGIPGDE---------------GKRGPK------------------GDM 187
            GP+G  G  GP G  G+E               G  GPK                  G  
Sbjct: 1244 GPEGKSGERGPPGPKGEEGKSGPPGPPGSRGIIGPEGPKGNAGPPGFPGPPGEPGLAGLK 1303

Query: 188  GYPGRIGLDG---------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G PG+ G DG               ++GLPG PG  G  G  G+ G PG  G  G  G+P
Sbjct: 1304 GDPGKDGEDGKPGDPGPPGEIGPPGKEGLPGPPGKQGTEGPAGLQGSPGMPGEKGDTGLP 1363

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G  G  G  G  G+ G+PG
Sbjct: 1364 GAPGPQGRIGDQGLPGPAGLPGLRGLPG 1391



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 71/157 (45%), Gaps = 30/157 (19%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP----------------- 162
            ++G  G  G  G KGE G  GAPG  G  G QG PG +G+ GP                 
Sbjct: 1008 ERGLSGLPGMPGSKGEIGLTGAPGPAGDKGAQGEPGKDGETGPQGSQGPKGPPGPLGLKG 1067

Query: 163  -KGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR----- 213
             +G+ G PGP    G+PG  G  G  G +G PG  G  G  G PGE G  G  G      
Sbjct: 1068 DRGEPGLPGPTGRDGLPGQRGLPGSPGPVGVPGEDGDKGDIGPPGEKGFKGSQGEMGPPG 1127

Query: 214  ----NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                 G+ G PG  GLPG+ G PG  G  G KG  GP
Sbjct: 1128 PPGLQGIRGEPGAIGLPGEKGPPGEIGRQGPKGEDGP 1164



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 90/191 (47%), Gaps = 51/191 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGE------------KGAPGVVGPPGPQGIPGDEG 158
            P G+ G  G KG+IG  GE G KG +GE            +G PG +G PG +G PG+ G
Sbjct: 1095 PVGVPGEDGDKGDIGPPGEKGFKGSQGEMGPPGPPGLQGIRGEPGAIGLPGEKGPPGEIG 1154

Query: 159  KRGPKGD---------------------------------MGYPGPQGIPGDEGKRGPKG 185
            ++GPKG+                                 +G  GP G PG++G RGPKG
Sbjct: 1155 RQGPKGEDGPIGASGPPGPIGPQGLPGPAGLKGEVGDTGTVGPMGPAGSPGEQGPRGPKG 1214

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------IPGTNGTNG 239
              G  G  G +GR G  G+ G+ G+PG +G +G  G+ G PG  G       PG  G+ G
Sbjct: 1215 SEGLQGPPGPEGRQGKKGDAGIPGLPGSSGPEGKSGERGPPGPKGEEGKSGPPGPPGSRG 1274

Query: 240  EKGMTGPRGNR 250
              G  GP+GN 
Sbjct: 1275 IIGPEGPKGNA 1285



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 99/247 (40%), Gaps = 69/247 (27%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKG---EIGAKGEMGVKG---------------ERG 137
            L  + G   S  E    G  GP G KG   E G  GE G +G               +RG
Sbjct: 1011 LSGLPGMPGSKGEIGLTGAPGPAGDKGAQGEPGKDGETGPQGSQGPKGPPGPLGLKGDRG 1070

Query: 138  EKGAP------------GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-- 183
            E G P            G+ G PGP G+PG++G    KGD+G PG +G  G +G+ GP  
Sbjct: 1071 EPGLPGPTGRDGLPGQRGLPGSPGPVGVPGEDGD---KGDIGPPGEKGFKGSQGEMGPPG 1127

Query: 184  ----KGDMGYPGRIGLDGRDGLPGE------------------------------PGLDG 209
                +G  G PG IGL G  G PGE                               GL G
Sbjct: 1128 PPGLQGIRGEPGAIGLPGEKGPPGEIGRQGPKGEDGPIGASGPPGPIGPQGLPGPAGLKG 1187

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
              G  G  G  G  G PG+ G  G  G+ G +G  GP G +GK G  G+PG P     + 
Sbjct: 1188 EVGDTGTVGPMGPAGSPGEQGPRGPKGSEGLQGPPGPEGRQGKKGDAGIPGLPGSSGPEG 1247

Query: 270  ESCSLLP 276
            +S    P
Sbjct: 1248 KSGERGP 1254



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 85/200 (42%), Gaps = 57/200 (28%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------------------- 152
            IG +G  G  G+ G  G  G  G PG  GPPG QG                         
Sbjct: 946  IGPQGPAGEPGQPGEPGNPGNPGIPGETGPPGEQGKEGPPGPLGLPGKDGPPGPSGLPGF 1005

Query: 153  --------IPGDEGKRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLD-- 196
                    +PG  G +G  G  G PGP      QG PG +G+ GP+G  G  G  G    
Sbjct: 1006 PGERGLSGLPGMPGSKGEIGLTGAPGPAGDKGAQGEPGKDGETGPQGSQGPKGPPGPLGL 1065

Query: 197  ----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN--- 249
                G  GLPG  G DG+PG+ G+ G PG  G+PG+DG  G  G  GEKG  G +G    
Sbjct: 1066 KGDRGEPGLPGPTGRDGLPGQRGLPGSPGPVGVPGEDGDKGDIGPPGEKGFKGSQGEMGP 1125

Query: 250  ---------RGKSGINGVPG 260
                     RG+ G  G+PG
Sbjct: 1126 PGPPGLQGIRGEPGAIGLPG 1145



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 12/136 (8%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L  ++G      E  PPG+ G +G  G+ G  G  G KG+RG++G  G  G  G  G+ G
Sbjct: 1383 LPGLRGLPGLAGENGPPGMTGAVGVPGKAGPVGPKGQKGDRGKRGIKGHRGELGHIGLKG 1442

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            ++G++G +G  G  GP+         GPKG+ G  G  G+ G +G PG PG++G    +G
Sbjct: 1443 EQGEKGEQGPRGATGPE---------GPKGNQGPVGLTGMKGNEGPPGLPGMEGP---SG 1490

Query: 216  MDGIPGKDGLPGKDGI 231
              G  G DG  G+ G+
Sbjct: 1491 PKGNAGNDGPKGEAGL 1506



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 88/225 (39%), Gaps = 66/225 (29%)

Query: 112  PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--- 165
            PG +G  GQ G  G++GE G   V+G RG  G PG  G  G  GI G  G+RGP GD   
Sbjct: 877  PGPKGDTGQPGPPGSQGEPGPPGVEGPRGFVGPPGQAGLDGKDGITGPPGERGPAGDSGP 936

Query: 166  ---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD----------------- 199
                     +G  GP G PG  G+ G  G+ G PG  G  G                   
Sbjct: 937  QGPPGAPGVIGPQGPAGEPGQPGEPGNPGNPGIPGETGPPGEQGKEGPPGPLGLPGKDGP 996

Query: 200  -------------GLPGEPGLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTN-- 238
                         GL G PG+ G  G  G+ G P      G  G PGKDG  G  G+   
Sbjct: 997  PGPSGLPGFPGERGLSGLPGMPGSKGEIGLTGAPGPAGDKGAQGEPGKDGETGPQGSQGP 1056

Query: 239  -------------GEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                         GE G+ GP G  G  G  G+PG+P       E
Sbjct: 1057 KGPPGPLGLKGDRGEPGLPGPTGRDGLPGQRGLPGSPGPVGVPGE 1101



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 88/202 (43%), Gaps = 66/202 (32%)

Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQG---IPGD---------------- 156
           GA+G MG+ G          +G+KG PG VG PGP+G   IPG+                
Sbjct: 506 GAEGPMGMTGISGPEGPPGPQGQKGEPGEVGEPGPRGERGIPGNTGREGRRGRPGRDGER 565

Query: 157 --EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------P 202
              G  G KG+ G PG  G+PGD+G+RGP G  G P   GL G +G+            P
Sbjct: 566 GSSGPPGMKGEQGVPGLPGLPGDKGERGPPGATGEP---GLPGHEGMQGDDGPPGLPGLP 622

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---------------------GEK 241
           GE G  G  G  G  G+PG  G+PG +G PG  G                       G +
Sbjct: 623 GEMGPRGFIGPRGFPGLPGNPGIPGSEGPPGAKGNTGPPGSSGSPGPPGPAGPAGPPGPQ 682

Query: 242 GMTGPRGNRGKSGINGVPGTPA 263
           G+ GP G  G  G  G+PG P 
Sbjct: 683 GVLGPTGLVGPQGKPGIPGLPG 704


>gi|440900498|gb|ELR51625.1| Collagen alpha-1(VI) chain [Bos grunniens mutus]
          Length = 1021

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 68/122 (55%), Gaps = 3/122 (2%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           +GERG+ G PG  G  G  G PGD    GP G  G  G +G  G++G RGPKG  G  G+
Sbjct: 268 EGERGKPGLPGEKGEAGDPGRPGD---LGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGK 324

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G+DG DG+ GE G  G+PG  G  G  G  GLPG  G PG  G  G+KG  G  G  G+
Sbjct: 325 RGMDGVDGMKGETGFPGLPGCKGSPGFDGIQGLPGPKGDPGAFGLKGQKGEPGADGEPGR 384

Query: 253 SG 254
            G
Sbjct: 385 PG 386



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 82/202 (40%), Gaps = 61/202 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------------------V 145
           GL GP G  G  G KG+ G  G  GE G PG                             
Sbjct: 356 GLPGPKGDPGAFGLKGQKGEPGADGEPGRPGSTGPPGDEGEPGEPGPPGEKGEAGDEGNA 415

Query: 146 GP------------------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           GP                  PG +G  GD G+ GP+GD G  GP G+PGD G+ GP G  
Sbjct: 416 GPDGAPGERGGPGERGPRGTPGARGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPK 475

Query: 188 GYPGRIGLDGRDG---------------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           GY G  G  G +G               L GE G DG PG NG +G PG  G PG  G P
Sbjct: 476 GYRGDEGPPGTEGPKGAPGPAGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYPGSRGPP 534

Query: 233 GTNGTNGEKGMTGPRGNRGKSG 254
           G NGT G  G+ G  G  G  G
Sbjct: 535 GINGTKGYPGLKGDEGEAGDPG 556



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 86/200 (43%), Gaps = 57/200 (28%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDMGYPGPQGI 174
           +GE G  G  G KGE G+ G PG +GP G QG+ G++G       RGPKG  G  G +G+
Sbjct: 268 EGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGM 327

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDG- 230
            G +G +G  G  G PG  G  G DG+ G PG  G PG  G+ G    PG DG PG+ G 
Sbjct: 328 DGVDGMKGETGFPGLPGCKGSPGFDGIQGLPGPKGDPGAFGLKGQKGEPGADGEPGRPGS 387

Query: 231 -----------------------------------------------IPGTNGTNGEKGM 243
                                                           PG  G  G+ G 
Sbjct: 388 TGPPGDEGEPGEPGPPGEKGEAGDEGNAGPDGAPGERGGPGERGPRGTPGARGPRGDPGE 447

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            GP+G++G+ G  GVPG P 
Sbjct: 448 AGPQGDQGREGPVGVPGDPG 467



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 78/143 (54%), Gaps = 6/143 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G  GE G +G+ G +G  G  G PG  GP GP+G  GDEG  G +G  G PGP
Sbjct: 436 PGARGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGTEGPKGAPGP 495

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G PGD G  G +G+ G PG  G +G  G PG PG  G PG NG  G PG  G  G+ G 
Sbjct: 496 AGPPGDPGLMGERGEDGPPGN-GTEGFPGFPGYPGSRGPPGINGTKGYPGLKGDEGEAGD 554

Query: 232 PGTNGTNGEKGMTGPRGNRGKSG 254
           PG +  +       PRG +G  G
Sbjct: 555 PGEDNND-----IAPRGAKGAKG 572



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 82/208 (39%), Gaps = 54/208 (25%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      E   PG  G +G  G  G KGE G +GE+G +G  G  G  G +G+ G +G +
Sbjct: 275 GLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGMDGVDGMK 334

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGLDG-------- 209
           G  G  G PG +G PG +G +G  G  G PG  GL G+ G PG   EPG  G        
Sbjct: 335 GETGFPGLPGCKGSPGFDGIQGLPGPKGDPGAFGLKGQKGEPGADGEPGRPGSTGPPGDE 394

Query: 210 ----------------------------------------IPGRNGMDGIPGK---DGLP 226
                                                    PG  G  G PG+    G  
Sbjct: 395 GEPGEPGPPGEKGEAGDEGNAGPDGAPGERGGPGERGPRGTPGARGPRGDPGEAGPQGDQ 454

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G++G  G  G  GE G  GP+G RG  G
Sbjct: 455 GREGPVGVPGDPGEAGPIGPKGYRGDEG 482



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 43/97 (44%), Gaps = 9/97 (9%)

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           Y G +G PG  G++G  GD G PG +G  G  G+ GE G  G  G  G  G  G+ G   
Sbjct: 267 YEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKG--- 323

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                   G +G  GM G  G  G  G  G PG   I
Sbjct: 324 ------KRGMDGVDGMKGETGFPGLPGCKGSPGFDGI 354



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 46/109 (42%), Gaps = 32/109 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVK------------------GERGEKGAPGVVGPPGPQGI 153
           PG  GPIG KG  G +G  G +                  GERGE G PG  G  G  G 
Sbjct: 466 PGEAGPIGPKGYRGDEGPPGTEGPKGAPGPAGPPGDPGLMGERGEDGPPGN-GTEGFPGF 524

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGK-------------RGPKGDMGY 189
           PG  G RGP G  G  G  G+ GDEG+             RG KG  GY
Sbjct: 525 PGYPGSRGPPGINGTKGYPGLKGDEGEAGDPGEDNNDIAPRGAKGAKGY 573


>gi|426215890|ref|XP_004002202.1| PREDICTED: collagen alpha-1(XXIV) chain [Ovis aries]
          Length = 1708

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 89/183 (48%), Gaps = 27/183 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQGP G  G+ G  GE G +G +G+ G PG +G  GP G  G+ G +G  G  G  GP
Sbjct: 968  PGLQGPPGSTGDRGLTGEPGPRGPQGDAGPPGEMGAEGPPGAEGESGLQGEPGTKGDVGP 1027

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG---------------- 215
             G  G  G+ G +G+ G PG  GL G+DGL G PG  G+PG +G                
Sbjct: 1028 VGSVGAAGEPGLRGEPGAPGEEGLQGKDGLKGNPGGKGLPGEDGEKGETGLPGTTGPLGG 1087

Query: 216  -----------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                       + GIPG+ G PGK G  G  G  GE G  G  G  G+SG+ G  GT   
Sbjct: 1088 PGLMGPPGPEGITGIPGQRGRPGKKGDKGQMGPAGEIGSRGAPGQIGESGLKGARGTRGA 1147

Query: 265  CAY 267
              +
Sbjct: 1148 VGH 1150



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 99/194 (51%), Gaps = 40/194 (20%)

Query: 112  PGLQGPIGQKGEIGAKGE----------------MGVKGERGEKGAPGV---VGPPGPQG 152
            PGL G  G KGE G  GE                MG +GERGE GA G    VG PGP+G
Sbjct: 1172 PGLSGLPGPKGEKGYPGEDNTILGPPGPRGEPGPMGEQGERGEPGAEGYKGHVGIPGPRG 1231

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                 G++GP G+ G  G QG+ G+ G  GPKG  G PG  G  G  GLPG PG  G+ G
Sbjct: 1232 A---TGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGAPGPSGKPGIPGLPGLPGPKGMQG 1288

Query: 213  RNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNR------------GKSG 254
             +G +GI   PGK GLPGK G+PG  G+ G  G+T   GP+G +            G  G
Sbjct: 1289 YHGAEGISGNPGKIGLPGKHGLPGIRGSPGRTGLTGSLGPQGAKGSSGPPGSPGVQGPKG 1348

Query: 255  INGVPGTPAICAYK 268
              G+PG P I   +
Sbjct: 1349 EQGLPGQPGIPGKR 1362



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 87/154 (56%), Gaps = 24/154 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGP---QG 152
            P G  GP+G++G  G KGE G +G               ERG +G PG+ GPPG    +G
Sbjct: 922  PRGPDGPLGEQGIQGTKGETGDQGKRGPHGLTGKTGNPGERGVQGKPGLQGPPGSTGDRG 981

Query: 153  IPGDEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            + G+ G RGP+GD G PG    +G PG EG+ G +G+ G  G +G  G  G  GEPGL G
Sbjct: 982  LTGEPGPRGPQGDAGPPGEMGAEGPPGAEGESGLQGEPGTKGDVGPVGSVGAAGEPGLRG 1041

Query: 210  IPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGE 240
             PG  G +G+ GKDGL   PG  G+PG +G  GE
Sbjct: 1042 EPGAPGEEGLQGKDGLKGNPGGKGLPGEDGEKGE 1075



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 91/176 (51%), Gaps = 18/176 (10%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG   P G  GIPG 
Sbjct: 1224 VGIPGPRGATGQQGPPGEPG---DQGEQGLKGERGSEGPKGKKGAPG---PSGKPGIPGL 1277

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG------- 209
             G  GPKG  GY G +GI G+ GK G  G  G PG  G  GR GL G  G  G       
Sbjct: 1278 PGLPGPKGMQGYHGAEGISGNPGKIGLPGKHGLPGIRGSPGRTGLTGSLGPQGAKGSSGP 1337

Query: 210  -----IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                 + G  G  G+PG+ G+PGK G  G  G  G  G +G +G  G+ GI G+ G
Sbjct: 1338 PGSPGVQGPKGEQGLPGQPGIPGKRGHQGAQGDQGPCGESGMKGEPGEHGIQGLTG 1393



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 92/186 (49%), Gaps = 42/186 (22%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +G+ G RG   ++G PG  G  G QG+ G+ G  GPKG  G PGP
Sbjct: 1209 QGERGEPGAEGYKGHVGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGAPGP 1268

Query: 172  Q---GIPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGM--- 216
                GIPG  G  GPKG  GY         PG+IGL G+ GL   PG+ G PGR G+   
Sbjct: 1269 SGKPGIPGLPGLPGPKGMQGYHGAEGISGNPGKIGLPGKHGL---PGIRGSPGRTGLTGS 1325

Query: 217  ------------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                               G  G+ GLPG+ GIPG  G  G +G  GP    G+SG+ G 
Sbjct: 1326 LGPQGAKGSSGPPGSPGVQGPKGEQGLPGQPGIPGKRGHQGAQGDQGP---CGESGMKGE 1382

Query: 259  PGTPAI 264
            PG   I
Sbjct: 1383 PGEHGI 1388



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 91/184 (49%), Gaps = 33/184 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------VVGP---PGPQGI- 153
           GL GP G +G  G KG  G+ G +GE+G PG               + GP   PGP+G+ 
Sbjct: 552 GLTGPPGMQGVKGLKGHPGLPGLQGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVR 611

Query: 154 -----PGDEGKRGPKGDMGYPG---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                PG+ G+ GP+G+ G PG          QG PGD G RGP G  G PG IG  G  
Sbjct: 612 GFIGSPGEVGQLGPEGERGVPGIRGKRGLKGRQGFPGDFGDRGPAGPDGSPGLIGSIGPP 671

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G PG  G  G  G  G  GIPG  GL G  G+PG  G  GE+G+ G +G  G +G  G  
Sbjct: 672 GFPGLRGSVGPVGPIGPSGIPGPMGLSGNKGLPGIKGDKGEQGIAGEQGETGYTGDKGAV 731

Query: 260 GTPA 263
           G P 
Sbjct: 732 GFPG 735



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 96/203 (47%), Gaps = 39/203 (19%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGP 150
            +  QG   +  E    G +GP G  G+ G  GE GV+G+ G +G PG      + G PGP
Sbjct: 929  LGEQGIQGTKGETGDQGKRGPHGLTGKTGNPGERGVQGKPGLQGPPGSTGDRGLTGEPGP 988

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGL 207
            +G  GD G  G  G  G PG +G  G +G+ G KGD+G  G +G  G  GL   PG PG 
Sbjct: 989  RGPQGDAGPPGEMGAEGPPGAEGESGLQGEPGTKGDVGPVGSVGAAGEPGLRGEPGAPGE 1048

Query: 208  DGIPGRNGMDGIPGKDGLPGKD------------------------------GIPGTNGT 237
            +G+ G++G+ G PG  GLPG+D                              GIPG  G 
Sbjct: 1049 EGLQGKDGLKGNPGGKGLPGEDGEKGETGLPGTTGPLGGPGLMGPPGPEGITGIPGQRGR 1108

Query: 238  NGEKGMTGPRGNRGKSGINGVPG 260
             G+KG  G  G  G+ G  G PG
Sbjct: 1109 PGKKGDKGQMGPAGEIGSRGAPG 1131



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 18/175 (10%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G++GE GA+G  G  G  G +GA G  GPPG    PGD+G++G KG+ G  GP+G    +
Sbjct: 1210 GERGEPGAEGYKGHVGIPGPRGATGQQGPPGE---PGDQGEQGLKGERGSEGPKG---KK 1263

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GP G  G PG  GL G  G+ G  G +GI G  G  G+PGK GLPG  G PG  G  
Sbjct: 1264 GAPGPSGKPGIPGLPGLPGPKGMQGYHGAEGISGNPGKIGLPGKHGLPGIRGSPGRTGLT 1323

Query: 239  GEKGMTGPR------------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
            G  G  G +            G +G+ G+ G PG P    ++       P  E+ 
Sbjct: 1324 GSLGPQGAKGSSGPPGSPGVQGPKGEQGLPGQPGIPGKRGHQGAQGDQGPCGESG 1378



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 80/149 (53%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G   +  + GE+G+ G  G+ GPPG QG+      +G KG  G PG 
Sbjct: 521 PGLPGPKGPKGDPGFSPDQALSGEKGDPGLSGLTGPPGMQGV------KGLKGHPGLPGL 574

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QG  G  G  G  G  GYPGR GL G DG PG  G+ G  G  G  G  G +G  G  GI
Sbjct: 575 QGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVRGFIGSPGEVGQLGPEGERGVPGI 634

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G +G  G  G+RG +G +G PG
Sbjct: 635 RGKRGLKGRQGFPGDFGDRGPAGPDGSPG 663



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 93/192 (48%), Gaps = 30/192 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G KG++G  G  G  G PG+ G PG    PG+EG +G  G  G PG
Sbjct: 1006 PPGAEGESGLQGEPGTKGDVGPVGSVGAAGEPGLRGEPG---APGEEGLQGKDGLKGNPG 1062

Query: 171  PQGIPGDEGKRGPK---------------------------GDMGYPGRIGLDGRDGLPG 203
             +G+PG++G++G                             G  G PG+ G  G+ G  G
Sbjct: 1063 GKGLPGEDGEKGETGLPGTTGPLGGPGLMGPPGPEGITGIPGQRGRPGKKGDKGQMGPAG 1122

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            E G  G PG+ G  G+ G  G  G  G  G  G  GE G+ G RG+ G+ G++G+PG   
Sbjct: 1123 EIGSRGAPGQIGESGLKGARGTRGAVGHLGLMGPAGEPGILGYRGHEGQPGLSGLPGPKG 1182

Query: 264  ICAYKRESCSLL 275
               Y  E  ++L
Sbjct: 1183 EKGYPGEDNTIL 1194



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 81/170 (47%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG---Y 168
           PG++G  G KG  G  G+ G +G  G  G+PG++G  GP G PG  G  GP G +G    
Sbjct: 632 PGIRGKRGLKGRQGFPGDFGDRGPAGPDGSPGLIGSIGPPGFPGLRGSVGPVGPIGPSGI 691

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP G+ G++G  G KGD G  G  G  G  G  G+ G  G PG  GM G PG  G  G 
Sbjct: 692 PGPMGLSGNKGLPGIKGDKGEQGIAGEQGETGYTGDKGAVGFPGPPGMRGKPGPSGQTGD 751

Query: 229 D------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                              GIPG NG  G KG  G RG  G  G+ G  G
Sbjct: 752 PGLPGPSGPPGPEGFPGDIGIPGQNGPEGSKGFIGNRGPSGPPGLKGTQG 801



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 93/199 (46%), Gaps = 48/199 (24%)

Query: 108  EYCPPGLQGPIGQKGEIGA---------KGEMGVK---GERGEKGAPGVVGPPGPQ---- 151
            E  P GL+G +G +G IG           GE+GV    GE+GE+G+PG VGP G +    
Sbjct: 826  EPGPEGLKGEVGDQGNIGKIGKTGPVGLPGEVGVTGSIGEKGERGSPGPVGPQGEKGAMG 885

Query: 152  --------------GIPGD---------------EGKRGPKGDMGYPGPQGIPGDEGKRG 182
                          G+PG                 G RGP G +G  G QG  G+ G +G
Sbjct: 886  YPGPPGVPGPTGALGLPGHVGARGPPGIPGPKGRRGPRGPDGPLGEQGIQGTKGETGDQG 945

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             +G  G  G+ G  G  G+ G+PGL G PG  G  G+ G+   PG  G  G  G  GE G
Sbjct: 946  KRGPHGLTGKTGNPGERGVQGKPGLQGPPGSTGDRGLTGE---PGPRGPQGDAGPPGEMG 1002

Query: 243  MTGPRGNRGKSGINGVPGT 261
              GP G  G+SG+ G PGT
Sbjct: 1003 AEGPPGAEGESGLQGEPGT 1021



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 70/131 (53%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           +G  G+ G  G  G PG+ GP GP+G PG    +   G+ G PG  G+ G  G +G KG 
Sbjct: 506 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPDQALSGEKGDPGLSGLTGPPGMQGVKGL 565

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G+PG  GL G  G+PG  G  G  G  G  G+ G DG PG  G+ G  G+ GE G  GP
Sbjct: 566 KGHPGLPGLQGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVRGFIGSPGEVGQLGP 625

Query: 247 RGNRGKSGING 257
            G RG  GI G
Sbjct: 626 EGERGVPGIRG 636



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 97/209 (46%), Gaps = 51/209 (24%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +GF  +     PPGL+G  G++G  G+ GE+G +G+ G K   G  G PGP+G+ G+ G 
Sbjct: 782 KGFIGNRGPSGPPGLKGTQGEEGPTGSFGELGPRGKPGPK---GYAGEPGPEGLKGEVGD 838

Query: 160 RGPKGDMGYPGPQGIP---------GDEGKR------GPKGD------------------ 186
           +G  G +G  GP G+P         G++G+R      GP+G+                  
Sbjct: 839 QGNIGKIGKTGPVGLPGEVGVTGSIGEKGERGSPGPVGPQGEKGAMGYPGPPGVPGPTGA 898

Query: 187 MGYPGRIGL---------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G PG +G                 G DG  GE G+ G  G  G  G  G  GL GK G 
Sbjct: 899 LGLPGHVGARGPPGIPGPKGRRGPRGPDGPLGEQGIQGTKGETGDQGKRGPHGLTGKTGN 958

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G  G+ G+ GP G+ G  G+ G PG
Sbjct: 959 PGERGVQGKPGLQGPPGSTGDRGLTGEPG 987



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 86/178 (48%), Gaps = 21/178 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRG------- 161
            PGL GP G +G  GA+G  G  G+    G+ G PG+ G PG  G+ G  G +G       
Sbjct: 1278 PGLPGPKGMQGYHGAEGISGNPGKIGLPGKHGLPGIRGSPGRTGLTGSLGPQGAKGSSGP 1337

Query: 162  --------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                    PKG+ G PG  GIPG  G +G +GD G  G  G+ G    PGE G+ G+ G 
Sbjct: 1338 PGSPGVQGPKGEQGLPGQPGIPGKRGHQGAQGDQGPCGESGMKGE---PGEHGIQGLTGF 1394

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             G  G  G DG  G  GI G  G  G++G TGP G  G  G  G  G      ++ E+
Sbjct: 1395 QGFPGPKGPDGDAGIVGISGPKGPVGQRGNTGPFGREGIIGPTGRTGPRGEKGFRGET 1452



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 86/174 (49%), Gaps = 28/174 (16%)

Query: 119  GQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGD---M 166
            GQ+G  G    KG+MG  GE G +GAPG +G  G +G  G  G        GP G+   +
Sbjct: 1104 GQRGRPGKKGDKGQMGPAGEIGSRGAPGQIGESGLKGARGTRGAVGHLGLMGPAGEPGIL 1163

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGR-------------IGLDGRDGLPGEPGLDGIPGR 213
            GY G +G PG  G  GPKG+ GYPG               G  G  G  GEPG +G  G 
Sbjct: 1164 GYRGHEGQPGLSGLPGPKGEKGYPGEDNTILGPPGPRGEPGPMGEQGERGEPGAEGYKGH 1223

Query: 214  NGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G+    G  G+ G PG+ G  G  G  GE+G  GP+G +G  G +G PG P +
Sbjct: 1224 VGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGAPGPSGKPGIPGL 1277



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 93/213 (43%), Gaps = 48/213 (22%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGI 153
           +  +G+        P G  GP G +G IG+ GE+G  G  GE+G PG+ G     G QG 
Sbjct: 587 IGSRGYPGRQGLAGPDGNPGPKGVRGFIGSPGEVGQLGPEGERGVPGIRGKRGLKGRQGF 646

Query: 154 PGDEGKRGPKGDMGYPG------PQGIPGDEGKRGPKGDMG---YPGRIGLDGRDGLPG- 203
           PGD G RGP G  G PG      P G PG  G  GP G +G    PG +GL G  GLPG 
Sbjct: 647 PGDFGDRGPAGPDGSPGLIGSIGPPGFPGLRGSVGPVGPIGPSGIPGPMGLSGNKGLPGI 706

Query: 204 -----EPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTN-------------------- 235
                E G+ G  G  G  G  G  G PG  G+   PG +                    
Sbjct: 707 KGDKGEQGIAGEQGETGYTGDKGAVGFPGPPGMRGKPGPSGQTGDPGLPGPSGPPGPEGF 766

Query: 236 -------GTNGEKGMTGPRGNRGKSGINGVPGT 261
                  G NG +G  G  GNRG SG  G+ GT
Sbjct: 767 PGDIGIPGQNGPEGSKGFIGNRGPSGPPGLKGT 799



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 97/237 (40%), Gaps = 58/237 (24%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------- 143
            G   S      PGL+G  G  GE G +G+ G+KG  G KG PG                 
Sbjct: 1026 GPVGSVGAAGEPGLRGEPGAPGEEGLQGKDGLKGNPGGKGLPGEDGEKGETGLPGTTGPL 1085

Query: 144  -------------VVGPPGPQGIP---GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
                         + G PG +G P   GD+G+ GP G++G  G  G  G+ G +G +G  
Sbjct: 1086 GGPGLMGPPGPEGITGIPGQRGRPGKKGDKGQMGPAGEIGSRGAPGQIGESGLKGARGTR 1145

Query: 188  GYPGRIGLDGRDGLP---------GEPGLDGIPGRNGMDGIPGKDGL------------- 225
            G  G +GL G  G P         G+PGL G+PG  G  G PG+D               
Sbjct: 1146 GAVGHLGLMGPAGEPGILGYRGHEGQPGLSGLPGPKGEKGYPGEDNTILGPPGPRGEPGP 1205

Query: 226  ---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
                G+ G PG  G  G  G+ GPRG  G+ G  G PG       K E  S  P  +
Sbjct: 1206 MGEQGERGEPGAEGYKGHVGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGK 1262



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 62/114 (54%), Gaps = 9/114 (7%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           KRGP+G  G  G  G+PG  G +GPKGD G+     L G  G PG  GL G PG  G+ G
Sbjct: 505 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPDQALSGEKGDPGLSGLTGPPGMQGVKG 564

Query: 219 IPGKDGLP---GKDGIP------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           + G  GLP   G+ GIP      G+ G  G +G+ GP GN G  G+ G  G+P 
Sbjct: 565 LKGHPGLPGLQGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVRGFIGSPG 618



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 80/194 (41%), Gaps = 51/194 (26%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI--- 174
           IG  G+ G +G  G  G RG  G PG+ G  G +G  G  G+ GP+G    PGP+G    
Sbjct: 770 IGIPGQNGPEGSKGFIGNRGPSGPPGLKGTQGEEGPTGSFGELGPRGK---PGPKGYAGE 826

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG------------- 221
           PG EG +G  GD G  G+IG  G  GLPGE G+ G  G  G  G PG             
Sbjct: 827 PGPEGLKGEVGDQGNIGKIGKTGPVGLPGEVGVTGSIGEKGERGSPGPVGPQGEKGAMGY 886

Query: 222 -----------KDGLPGK---------------------DGIPGTNGTNGEKGMTGPRGN 249
                        GLPG                      DG  G  G  G KG TG +G 
Sbjct: 887 PGPPGVPGPTGALGLPGHVGARGPPGIPGPKGRRGPRGPDGPLGEQGIQGTKGETGDQGK 946

Query: 250 RGKSGINGVPGTPA 263
           RG  G+ G  G P 
Sbjct: 947 RGPHGLTGKTGNPG 960



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 80/178 (44%), Gaps = 36/178 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGPPGPQG-------------- 152
           GL G  G KGE G  GE G  G  G+KGA      PG+ G PGP G              
Sbjct: 702 GLPGIKGDKGEQGIAGEQGETGYTGDKGAVGFPGPPGMRGKPGPSGQTGDPGLPGPSGPP 761

Query: 153 ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                     IPG  G  G KG +G  GP G PG +G +G +G  G  G +G  G+   P
Sbjct: 762 GPEGFPGDIGIPGQNGPEGSKGFIGNRGPSGPPGLKGTQGEEGPTGSFGELGPRGK---P 818

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G PG  G+ G  G  G  GK G  G  G  GE G+TG  G +G+    G PG
Sbjct: 819 GPKGYAGEPGPEGLKGEVGDQGNIGKIGKTGPVGLPGEVGVTGSIGEKGE---RGSPG 873


>gi|395745549|ref|XP_003780511.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(IV) chain [Pongo
           abelii]
          Length = 1363

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 97/187 (51%), Gaps = 37/187 (19%)

Query: 112 PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           PGLQG  G  G+ GAKGE        +G+ G RGEKG  G+VG       PG  G++G K
Sbjct: 753 PGLQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGLVG------FPGSPGEKGEK 806

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
           G +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIPG  G  G+PG  
Sbjct: 807 GSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTP 863

Query: 222 -------KDGLPGKDGIPGTNGTNGEKGMTGPR-----------GNRGKSGINGVPGTPA 263
                  + G PG DGIPG+ G  GE G +              G++G+ G  G+ G+P 
Sbjct: 864 GPTGPAGQKGEPGSDGIPGSAGEKGEPGCSAAAFPITSNCFSCLGSKGEVGFPGLAGSPG 923

Query: 264 ICAYKRE 270
           I   K E
Sbjct: 924 IPGSKGE 930



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/164 (44%), Positives = 92/164 (56%), Gaps = 18/164 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGY 168
           PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG  G  GD G     GP+GD G+
Sbjct: 585 PGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGDPGF 644

Query: 169 PGPQG---IPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G +G   +PG  G          +G KGD G  G+IG  G  G  G+PG  G+PG++G 
Sbjct: 645 KGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQ 704

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 705 AGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 745



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 85/160 (53%), Gaps = 23/160 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD G  G  G PG  
Sbjct: 670 GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLP 729

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--------G 230
           G +G  G MG PG          PGE G+ GIPG  G  G+PG  G  G+         G
Sbjct: 730 GPKGSVGGMGLPG---------TPGEKGVPGIPGLQGSPGLPGDKGAKGEKGQAGPPGIG 780

Query: 231 IPGTNGTNGEKGMT------GPRGNRGKSGINGVPGTPAI 264
           IPG  G  G++G+       G +G +G  GI G+PG+P +
Sbjct: 781 IPGLRGEKGDQGLVGFPGSPGEKGEKGSIGIPGMPGSPGL 820



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 89/173 (51%), Gaps = 28/173 (16%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYP 169
           GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG    MG P
Sbjct: 682 GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 741

Query: 170 ---------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP--- 211
                          G  G+PGD+G +G KG  G PG IG+ G  G  G+ GL G P   
Sbjct: 742 GTPGEKGVPGIPGLQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGLVGFPGSP 800

Query: 212 ---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  G  GIPG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG 
Sbjct: 801 GEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGV 853



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 92/186 (49%), Gaps = 37/186 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVGPP------GP 150
           PG  G  GQ G+ G KG+ G+ G  G  G                PG  G P      G 
Sbjct: 699 PGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGLQGS 758

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGE 204
            G+PGD+G +G KG  G PG  GIPG  G++G +G +G+PG  G  G        G+PG 
Sbjct: 759 PGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGLVGFPGSPGEKGEKGSIGIPGMPGS 817

Query: 205 PGLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGI 255
           PGL G PG  G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G 
Sbjct: 818 PGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGS 877

Query: 256 NGVPGT 261
           +G+PG+
Sbjct: 878 DGIPGS 883



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 85/176 (48%), Gaps = 25/176 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL  P G KG+ GA+G  G+ G+ G  G PG  G PG  G PG +G+ G  G  G PG 
Sbjct: 556 PGLDMP-GPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGS 614

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD------------- 217
            G  G  G  G KGD G+PG  G  G  G  G+ G  G+PG+ G MD             
Sbjct: 615 PGPVGAPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGD 674

Query: 218 ----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                     G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 675 QGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 730



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 61/123 (49%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----DE 178
           EIG  G+ G KG+RG  G  GV G PGPQG PG          +G PG +G PG    D 
Sbjct: 209 EIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGL---------IGQPGAKGEPGEIYFDL 259

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
             +G KGD G+PG+                G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 260 RLKGDKGDPGFPGQ---------------PGMPGRAGSPGRDGHPGLPGPKGSPGSVGLK 304

Query: 239 GEK 241
           GE+
Sbjct: 305 GER 307



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 84/215 (39%), Gaps = 76/215 (35%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------PK 163
           G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG++G +G          K
Sbjct: 795 GFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVK 854

Query: 164 GDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG   P G  G +                        GEPG DGIPG  G  G P
Sbjct: 855 GEAGLPGTPGPTGPAGQK------------------------GEPGSDGIPGSAGEKGEP 890

Query: 221 --------------------GKDGLPGKDGIPGTNGTNGEKGMT---------------- 244
                               G+ G PG  G PG  G+ GE+G                  
Sbjct: 891 GCSAAAFPITSNCFSCLGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPG 950

Query: 245 ----GPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
               GP+G+RG  G  G+PG     A   E C  L
Sbjct: 951 HATEGPKGDRGPQGQPGLPGVEGALALSMELCCEL 985



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 70/144 (48%), Gaps = 30/144 (20%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 366 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 425

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGE 240
            GDMG PG  G  G DGLPG PG+ G  G  G+       GLPG     G+PG  GT GE
Sbjct: 426 PGDMGPPGTPGRPGFDGLPGNPGVQGQKGEPGV-------GLPGLKGLPGLPGIPGTPGE 478

Query: 241 KGMTGPRGNRGKSGINGVPGTPAI 264
           KG  G  G  G+ G  G PG   I
Sbjct: 479 KGSIGVPGVPGEHGAIGPPGLQGI 502



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 87/197 (44%), Gaps = 49/197 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
           GL G  G  G  G KG +GV G  GE GA   +GPPG QGI G+ G              
Sbjct: 465 GLPGLPGIPGTPGEKGSIGVPGVPGEHGA---IGPPGLQGIRGEPGPPGLPGSVGSPGVP 521

Query: 160 -------------------------RGPKGDMGYPG--PQGIPGDEGKRGPKGDMGYPGR 192
                                    +G KG  G+PG    G  GD+G +G  G  G  G 
Sbjct: 522 GIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGL 581

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGN 249
            GL G+ G PG PG  G  G  G+ G PG+ G P   G  G+PG  G +G  G +GPRG+
Sbjct: 582 PGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGD 641

Query: 250 ---RGKSGINGVPGTPA 263
              +G  G  G+PG P 
Sbjct: 642 PGFKGDKGDVGLPGKPG 658



 Score = 39.7 bits (91), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 67/174 (38%), Gaps = 72/174 (41%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGE--------------------RGEKGAPGVVGPP 148
            PG  GP GQKGE G+    G  G KGE                    +GE G PG+ G P
Sbjct: 863  PGPTGPAGQKGEPGSDGIPGSAGEKGEPGCSAAAFPITSNCFSCLGSKGEVGFPGLAGSP 922

Query: 149  GPQGIPGDEGKR-----------------------GPKGDMGYPGPQGIPGDEGK----- 180
               GIPG +G++                       GPKGD G  G  G+PG EG      
Sbjct: 923  ---GIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGVEGALALSM 979

Query: 181  ---------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                            G KGDMG PG  G  G  GL   PGL GI G  G  G+
Sbjct: 980  ELCCELEGIGGSPGITGSKGDMGPPGVPGFQGPKGL---PGLQGIKGDQGDQGV 1030


>gi|344283345|ref|XP_003413432.1| PREDICTED: collagen alpha-3(V) chain [Loxodonta africana]
          Length = 1633

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 89/171 (52%), Gaps = 12/171 (7%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQG 152
            L   +G    T    PPG +GP+G  G IG  G+ G +G     GEKG+PG  G PGP G
Sbjct: 878  LKGDKGPPGPTGANGPPGERGPVGPAGGIGLPGQSGAQGPVGPAGEKGSPGQRGSPGPTG 937

Query: 153  ---------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                     +PG  G  GP G+ G  G  G PG +G +G KGD G PG IG+ G  G PG
Sbjct: 938  KDGIPGPLGLPGPTGAVGPSGEEGDKGEVGAPGHKGSKGDKGDAGPPGPIGVRGPAGHPG 997

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             PG DG  GR G  G+ G+ G  G  G  G  G  G +GM GP G +G+ G
Sbjct: 998  SPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGMPGPSGEKGEVG 1048



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 89/166 (53%), Gaps = 14/166 (8%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           + + G+     E    GLQGP G +G  G  G  G  G  G           GP+G+PGD
Sbjct: 493 MGLPGYPGLKGEMGEMGLQGPRGLQGPPGPTGREGKMGRSGAD---------GPRGLPGD 543

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG--LPGEPGLDGIPGRN 214
               GPKGD G+ G  G+PG++G+RG  G +G PG  G DG +G   PG PG+ G+PG +
Sbjct: 544 ---TGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGDDGDNGSWSPGNPGILGLPGAD 600

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G PG +G  G+ G  G  G+ G  G  GPRG +G SG  G+ G
Sbjct: 601 GPPGHPGHEGPMGEKGAQGPPGSAGPSGYPGPRGVKGTSGNRGLQG 646



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 84/161 (52%), Gaps = 23/161 (14%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  G+ G +G  G  G+KGE GE G   + GP G QG PG  G+ G  G  G  G
Sbjct: 480 PPGPVGLTGRPGPMGLPGYPGLKGEMGEMG---LQGPRGLQGPPGPTGREGKMGRSGADG 536

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------GLPGEPGLDG-----IPGRNGM 216
           P+G+PGD    GPKGD G+ G  GL G           G PG PG DG      PG  G+
Sbjct: 537 PRGLPGD---TGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGDDGDNGSWSPGNPGI 593

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G+PG DG PG    PG  G  GEKG  GP G+ G SG  G
Sbjct: 594 LGLPGADGPPGH---PGHEGPMGEKGAQGPPGSAGPSGYPG 631



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 89/165 (53%), Gaps = 11/165 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL+G +G+ G  G +G  G  G  G +G  G  G  GP+G+PGD    GPKGD G+ G 
Sbjct: 499 PGLKGEMGEMGLQGPRGLQGPPGPTGREGKMGRSGADGPRGLPGD---TGPKGDRGFDGL 555

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL--PGEPGL------DGIPGRNGMDGIPGKD 223
            G+PG++G+RG  G +G PG  G DG +G   PG PG+      DG PG  G +G  G+ 
Sbjct: 556 PGLPGEKGQRGDFGHVGQPGPPGDDGDNGSWSPGNPGILGLPGADGPPGHPGHEGPMGEK 615

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G  G +G  G +G+ G  GNRG  G  G  G      +K
Sbjct: 616 GAQGPPGSAGPSGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFK 660



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/133 (43%), Positives = 76/133 (57%), Gaps = 12/133 (9%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG++G  GE G  G  GEKG  G+       G+PG  G+ GPKG +G+PGP G  G++
Sbjct: 685 GLKGQVGLAGEEGPPGSAGEKGKLGL------PGLPGYPGRPGPKGSIGFPGPLGPVGEK 738

Query: 179 GKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           GKRG       +G+ G PG  G  G+ G  G PG  G  G++G  GIPG+ G  G+ G+P
Sbjct: 739 GKRGKAGQSGLEGERGPPGSRGERGQPGTTGHPGPKGDVGQDGASGIPGEKGFQGQTGLP 798

Query: 233 GTNGTNGEKGMTG 245
           G  G  G +G TG
Sbjct: 799 GPAGVVGPQGKTG 811



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/234 (36%), Positives = 104/234 (44%), Gaps = 39/234 (16%)

Query: 72  REKEQQNSTHNNPW----VWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAK 127
           R +  Q  T  +P     V  +  S IP    +GF   T    P G+ GP G+ GE G  
Sbjct: 759 RGERGQPGTTGHPGPKGDVGQDGASGIP--GEKGFQGQTGLPGPAGVVGPQGKTGEAGPL 816

Query: 128 GEMG---------------VKGERGEKGAPGVVGPPGPQG------------IPGDEGKR 160
           GE G               ++G  G KG  G +GP G +G             PGD G  
Sbjct: 817 GERGPPGPPGPPGEQGLPGLEGREGHKGELGPLGPLGKEGPPGPRGFPGPKGAPGDPGPT 876

Query: 161 GPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN 214
           G KGD G PGP G    PG+ G  GP G +G PG+ G  G  G  GE   PG  G PG  
Sbjct: 877 GLKGDKGPPGPTGANGPPGERGPVGPAGGIGLPGQSGAQGPVGPAGEKGSPGQRGSPGPT 936

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G DGIPG  GLPG  G  G +G  G+KG  G  G++G  G  G  G P     +
Sbjct: 937 GKDGIPGPLGLPGPTGAVGPSGEEGDKGEVGAPGHKGSKGDKGDAGPPGPIGVR 990



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 93/215 (43%), Gaps = 66/215 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG  GP+G+KG+ G  G+ G++GERG      E+G PG  G PGP+G  G +G  G  G+
Sbjct: 729 PGPLGPVGEKGKRGKAGQSGLEGERGPPGSRGERGQPGTTGHPGPKGDVGQDGASGIPGE 788

Query: 166 MGYPGPQGIPGD------------------------------------EGKRGPKGDMGY 189
            G+ G  G+PG                                     EG+ G KG++G 
Sbjct: 789 KGFQGQTGLPGPAGVVGPQGKTGEAGPLGERGPPGPPGPPGEQGLPGLEGREGHKGELGP 848

Query: 190 ------------------------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                                   PG  GL G  G PG  G +G PG  G  G  G  GL
Sbjct: 849 LGPLGKEGPPGPRGFPGPKGAPGDPGPTGLKGDKGPPGPTGANGPPGERGPVGPAGGIGL 908

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG+ G  G  G  GEKG  G RG+ G +G +G+PG
Sbjct: 909 PGQSGAQGPVGPAGEKGSPGQRGSPGPTGKDGIPG 943



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 83/182 (45%), Gaps = 33/182 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY 168
           PG+ G  G  G  G  G  G  GE+G +G PG  GP   PGP+G+ G  G RG +G+ G 
Sbjct: 591 PGILGLPGADGPPGHPGHEGPMGEKGAQGPPGSAGPSGYPGPRGVKGTSGNRGLQGEKGE 650

Query: 169 PGPQGIPGDEGKRGPK---------------------------GDMGYPGRIGLDGRDGL 201
            G  G PG +G  G K                           G+ G PG  G  G+ GL
Sbjct: 651 KGEDGFPGFKGDGGLKGDRGHPGPPGPRGEDGPEGLKGQVGLAGEEGPPGSAGEKGKLGL 710

Query: 202 PGEPGLDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           PG PG  G PG  G  G P   G  G  GK G  G +G  GE+G  G RG RG+ G  G 
Sbjct: 711 PGLPGYPGRPGPKGSIGFPGPLGPVGEKGKRGKAGQSGLEGERGPPGSRGERGQPGTTGH 770

Query: 259 PG 260
           PG
Sbjct: 771 PG 772



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 81/166 (48%), Gaps = 15/166 (9%)

Query: 114  LQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDEG 158
            L+G  G KGE+G  G +G                 G+ G  G  G  GPPGP G  G  G
Sbjct: 836  LEGREGHKGELGPLGPLGKEGPPGPRGFPGPKGAPGDPGPTGLKGDKGPPGPTGANGPPG 895

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            +RGP G  G  G  G  G +G  GP G+ G PG+ G  G  G  G PG  G+PG  G  G
Sbjct: 896  ERGPVGPAGGIGLPGQSGAQGPVGPAGEKGSPGQRGSPGPTGKDGIPGPLGLPGPTGAVG 955

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G++G  G+ G PG  G+ G+KG  GP G  G  G  G PG+P  
Sbjct: 956  PSGEEGDKGEVGAPGHKGSKGDKGDAGPPGPIGVRGPAGHPGSPGA 1001



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 82/188 (43%), Gaps = 45/188 (23%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------------- 145
           P G  GP G KG  G +G  G KGE+GE G PG                           
Sbjct: 626 PSGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDGGLKGDRGHPGPPGPRGEDGPEG 685

Query: 146 -----------GPPGPQ---------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
                      GPPG           G+PG  G+ GPKG +G+PGP G  G++GKRG  G
Sbjct: 686 LKGQVGLAGEEGPPGSAGEKGKLGLPGLPGYPGRPGPKGSIGFPGPLGPVGEKGKRGKAG 745

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G  G  G  G  G  G+PG  G PG  G  G  G  G+PG+ G  G  G  G  G+ G
Sbjct: 746 QSGLEGERGPPGSRGERGQPGTTGHPGPKGDVGQDGASGIPGEKGFQGQTGLPGPAGVVG 805

Query: 246 PRGNRGKS 253
           P+G  G++
Sbjct: 806 PQGKTGEA 813



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 93/196 (47%), Gaps = 47/196 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGA-----PGVVGPPGPQGIPGDEGKRGPKGDM 166
           PGL G  GQ+G+ G  G+ G  G+ G+ G+     PG++G PG  G PG  G  GP G+ 
Sbjct: 556 PGLPGEKGQRGDFGHVGQPGPPGDDGDNGSWSPGNPGILGLPGADGPPGHPGHEGPMGEK 615

Query: 167 ------------GYPGPQGIPGD------EGKRGPKGDMGYPG----------------- 191
                       GYPGP+G+ G       +G++G KG+ G+PG                 
Sbjct: 616 GAQGPPGSAGPSGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDGGLKGDRGHPGPP 675

Query: 192 -------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                    GL G+ GL GE G  G  G  G  G+PG  G PG+ G  G+ G  G  G  
Sbjct: 676 GPRGEDGPEGLKGQVGLAGEEGPPGSAGEKGKLGLPGLPGYPGRPGPKGSIGFPGPLGPV 735

Query: 245 GPRGNRGKSGINGVPG 260
           G +G RGK+G +G+ G
Sbjct: 736 GEKGKRGKAGQSGLEG 751



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 83/182 (45%), Gaps = 29/182 (15%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK--GDMGY 168
           P GL G  G KG+ G  G  G+ GE+G++G  G VG PGP G  GD G   P   G +G 
Sbjct: 537 PRGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGDDGDNGSWSPGNPGILGL 596

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---------DGI 219
           PG  G PG  G  GP G+ G  G  G  G  G PG  G+ G  G  G+         DG 
Sbjct: 597 PGADGPPGHPGHEGPMGEKGAQGPPGSAGPSGYPGPRGVKGTSGNRGLQGEKGEKGEDGF 656

Query: 220 PGKDGLPG------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG  G  G                   +G+ G  G  GE+G  G  G +GK G+ G+PG 
Sbjct: 657 PGFKGDGGLKGDRGHPGPPGPRGEDGPEGLKGQVGLAGEEGPPGSAGEKGKLGLPGLPGY 716

Query: 262 PA 263
           P 
Sbjct: 717 PG 718



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 86/188 (45%), Gaps = 26/188 (13%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GPPGP G+    G+ GP G  GYPG +G  G+ G +GP+G  G PG  G +G+ G  G  
Sbjct: 479 GPPGPVGL---TGRPGPMGLPGYPGLKGEMGEMGLQGPRGLQGPPGPTGREGKMGRSGAD 535

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING--VPGTPA 263
           G  G+PG  G  G  G DGLP   G+PG  G  G+ G  G  G  G  G NG   PG P 
Sbjct: 536 GPRGLPGDTGPKGDRGFDGLP---GLPGEKGQRGDFGHVGQPGPPGDDGDNGSWSPGNPG 592

Query: 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSI 323
           I          LP ++      PP   G E      P+  +           +G+P P  
Sbjct: 593 ILG--------LPGADG-----PPGHPGHE-----GPMGEKGAQGPPGSAGPSGYPGPRG 634

Query: 324 IWKTSENK 331
           +  TS N+
Sbjct: 635 VKGTSGNR 642



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 54/107 (50%), Gaps = 6/107 (5%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G  GP G  G PGP G+PG  G +G  G+MG      L G  GL G PG  G  G+ G 
Sbjct: 478 KGPPGPVGLTGRPGPMGLPGYPGLKGEMGEMG------LQGPRGLQGPPGPTGREGKMGR 531

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  GLPG  G  G  G +G  G+ G +G RG  G  G PG P 
Sbjct: 532 SGADGPRGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPG 578



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 52/95 (54%), Gaps = 18/95 (18%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            KG+ G+KGE+G  G  G++GPPG         + G KGD G+PG QG PG      P GD
Sbjct: 1278 KGDAGLKGEKGHIGLVGLIGPPG---------EAGEKGDRGFPGVQGHPG------PMGD 1322

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             G PG IG  G    PG PG+ G  G+ G  G PG
Sbjct: 1323 PGLPGPIGSLGH---PGAPGVAGPLGQKGSKGSPG 1354


>gi|344313137|dbj|BAK64231.1| Type II collagen A precursor isoform 1 [Oryzias latipes]
          Length = 1491

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 83/143 (58%), Gaps = 12/143 (8%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPKGDMGYPGPQ 172
           GP+G KG  G  G  G KGE G KG    +GPPG QG P   G+EGKRGP+G+ G  GP 
Sbjct: 451 GPLGPKGTSGDPGIAGFKGEAGPKG---EIGPPGLQGAPGPQGEEGKRGPRGEPGAAGPL 507

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG+   RG  G+ G+PG+ GL G+ G PGE    G PG +G  G  G  G PG+ G+P
Sbjct: 508 GPPGE---RGAPGNRGFPGQDGLAGQKGAPGE---RGPPGASGAKGATGDPGRPGESGLP 561

Query: 233 GTNGTNGEKGMTGPRGNRGKSGI 255
           G  G  G  G  GP+G  G SG 
Sbjct: 562 GARGLTGRPGDAGPQGKVGPSGA 584



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 90/197 (45%), Gaps = 35/197 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG  G  G+ G  GA+G  G +G RGE G PG  GP G  G PG +G  G KG  G PG 
Sbjct: 372 PGSPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPSGASGNPGTDGIPGAKGSAGAPGI 431

Query: 171 -----------------------PQGIPGD------EGKRGPKGDMGYPGRIGLDGRDGL 201
                                  P+G  GD      +G+ GPKG++G PG  G  G  G 
Sbjct: 432 AGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIAGFKGEAGPKGEIGPPGLQGAPGPQGE 491

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+ G  G PG  G  G PG+ G PG  G PG +G  G+KG  G RG  G SG  G  G 
Sbjct: 492 EGKRGPRGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGQKGAPGERGPPGASGAKGATGD 551

Query: 262 PAICAYKRESCSLLPNS 278
           P      R   S LP +
Sbjct: 552 PG-----RPGESGLPGA 563



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 87/177 (49%), Gaps = 15/177 (8%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  PPGLQG  G +GE G +G  G  G  G  G PG  G PG +G PG
Sbjct: 464 IAGFKGEAGPKGEIGPPGLQGAPGPQGEEGKRGPRGEPGAAGPLGPPGERGAPGNRGFPG 523

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            +G  G K   G PG +G PG  G +G  GD G PG  GL G  GL G PG  G  G+ G
Sbjct: 524 QDGLAGQK---GAPGERGPPGASGAKGATGDPGRPGESGLPGARGLTGRPGDAGPQGKVG 580

Query: 216 MDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+D            G PG  G PG  G  GE G +G +G  G  G+ G+PG
Sbjct: 581 PSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGLLGAPGLRGLPG 637



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 87/207 (42%), Gaps = 51/207 (24%)

Query: 100 QGFCNSTKEYCPPGLQGP---------------IGQKGEIGAKGEMGVKGERGEKGAPGV 144
           +GF        P GLQGP               IG  G  GA+G  G++G  GE+GA G+
Sbjct: 705 RGFPGERGPAGPQGLQGPRGLPGTPGTDGPKGAIGPAGSRGAQGPQGLQGMPGERGAAGI 764

Query: 145 VGPPG---------PQGIPGDEGKR---------------------GPKGDMGYPGPQGI 174
            GP G         P+G  G +G R                     GP G  G PG +G 
Sbjct: 765 PGPKGDRGDLGEKGPEGAAGKDGARGLTGPIGPPGPGGPNGEKGESGPAGPSGAPGTRGA 824

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PGD G+ GP G  G+ G  G DG+ G  GE    G PG+ G  G PG     G  G PG 
Sbjct: 825 PGDRGETGPPGPAGFAGPPGADGQPGTKGE---QGEPGQKGEAGAPGPQ---GPSGAPGP 878

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G  G RG +G  G  G PG 
Sbjct: 879 AGPTGVSGPKGARGAQGPPGATGFPGA 905



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 82/171 (47%), Gaps = 36/171 (21%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G  G+ G KGE G  G++GE GAPG   P GP G P      GP G  G  G
Sbjct: 836 PAGFAGPPGADGQPGTKGEQGEPGQKGEAGAPG---PQGPSGAP------GPAGPTGVSG 886

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGL---------------------DGRDGLPGEPGLDG 209
           P+G     G +GP G  G+PG  G                      DG  G+ G+PG   
Sbjct: 887 PKGA---RGAQGPPGATGFPGAAGRVGPPGPNGNPGPAGPAGPPGKDGPKGVRGDPGPA- 942

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             GR G  G+ G  G PG+ G  G +G NG  G +GP+G  G+ GI G+PG
Sbjct: 943 --GRQGDAGLRGPAGAPGEKGDAGEDGPNGPSGPSGPQGLAGQRGIVGLPG 991



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 88/212 (41%), Gaps = 57/212 (26%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP----------- 148
            QG      E   PG QGP G  G  G  G  G KG RG +G PG  G P           
Sbjct: 855  QGEPGQKGEAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPPGP 914

Query: 149  ----------------GPQGIPGDEGKRGPKGDMGYPGPQGIP---GDEGKRGPKGDMGY 189
                            GP+G+ GD G  G +GD G  GP G P   GD G+ GP G  G 
Sbjct: 915  NGNPGPAGPAGPPGKDGPKGVRGDPGPAGRQGDAGLRGPAGAPGEKGDAGEDGPNGPSGP 974

Query: 190  PGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKD----------------------- 223
             G  GL G+    GLPG+ G  G PG  G  G PGK                        
Sbjct: 975  SGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGPGDRGPPGPVGPPGLTGP 1034

Query: 224  -GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G PG++G PG++G  G  G  G +G+RG +G
Sbjct: 1035 AGEPGREGNPGSDGPPGRDGSAGIKGDRGNTG 1066



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 86/203 (42%), Gaps = 57/203 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMG- 167
           PG++G  G  G  GAKGE G  G +GE GAPG  G PGP   +G+PG+ G+ G  G  G 
Sbjct: 288 PGIKGHRGYPGLDGAKGETGAVGAKGEAGAPGESGAPGPMGPRGLPGERGRPGSTGAAGA 347

Query: 168 -----------------------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                                  +PG    PG +G+ GP G  G  G  G  G  G PG 
Sbjct: 348 RGNDGLPGPAGPPGPVGPAGAPGFPG---SPGSKGEAGPTGARGPEGAQGPRGESGTPGS 404

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIP---------------------GTNGTNGE--- 240
           PG  G  G  G DGIPG  G  G  GI                      G  GT+G+   
Sbjct: 405 PGPSGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGI 464

Query: 241 ---KGMTGPRGNRGKSGINGVPG 260
              KG  GP+G  G  G+ G PG
Sbjct: 465 AGFKGEAGPKGEIGPPGLQGAPG 487



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 73/159 (45%), Gaps = 36/159 (22%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAP---------------GVVGPPGPQGIPGDEG----- 158
            G++GE G KGE G  G +G  GAP               G  GPPG  G PG  G     
Sbjct: 853  GEQGEPGQKGEAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPP 912

Query: 159  ----------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                            K GPKG  G PGP G  GD G RGP G  G  G  G DG +G  
Sbjct: 913  GPNGNPGPAGPAGPPGKDGPKGVRGDPGPAGRQGDAGLRGPAGAPGEKGDAGEDGPNGPS 972

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G  G  G+ G+ G+ G+PG+ G  G  G+PG +G  G++
Sbjct: 973  GPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQ 1011



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 70/157 (44%), Gaps = 36/157 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPPGPQGIPGDEG----- 158
            G QG  GQKGE GA G  G  G           G KGA G  GPPG  G PG  G     
Sbjct: 853  GEQGEPGQKGEAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPP 912

Query: 159  ----------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                            K GPKG  G PGP G  GD G RGP G  G  G  G DG +G  
Sbjct: 913  GPNGNPGPAGPAGPPGKDGPKGVRGDPGPAGRQGDAGLRGPAGAPGEKGDAGEDGPNGPS 972

Query: 203  GEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPG 233
            G  G  G+ G+ G+ G+PG+       GLPG  G PG
Sbjct: 973  GPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPG 1009



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 69/143 (48%), Gaps = 33/143 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP+G  GE GA G  G  G+    G+KGAPG  GPPG  G  G  G  G  G+ G 
Sbjct: 501 PGAAGPLGPPGERGAPGNRGFPGQDGLAGQKGAPGERGPPGASGAKGATGDPGRPGESGL 560

Query: 169 PGPQGI---PGD---EGKRGPKGD---------------------MGYPGRIGLDGRDGL 201
           PG +G+   PGD   +GK GP G                      MG+PG  G  G  G 
Sbjct: 561 PGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGATGEPGK 620

Query: 202 PGEPGLDGIPGRNGMDGIPGKDG 224
            GE GL G P   G+ G+PGKDG
Sbjct: 621 SGEKGLLGAP---GLRGLPGKDG 640



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 107/285 (37%), Gaps = 77/285 (27%)

Query: 56  PHVEFVPPDLYEEIREREKEQQNSTHNNPWVW--LNAYSRIPLVAMQGFCNS---TKEYC 110
           P  E  PP L      + +E +      P     L           +GF        +  
Sbjct: 473 PKGEIGPPGLQGAPGPQGEEGKRGPRGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGQKG 532

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGK-------- 159
            PG +GP G  G  GA G+ G  GE G  GA G+ G PG   PQG  G  G         
Sbjct: 533 APGERGPPGASGAKGATGDPGRPGESGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPG 592

Query: 160 -------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG--------- 203
                  RG  G MG+PGP+G  G+ GK G KG +G PG  GL G+DG  G         
Sbjct: 593 PPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGLLGAPGLRGLPGKDGETGSAGPPGPAG 652

Query: 204 ---EPGLDGIPGRNGMD------------------------------------GIPGKDG 224
              E G  G PG +G                                      G PG+ G
Sbjct: 653 PAGERGEQGQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGATGPRGERGFPGERG 712

Query: 225 ------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                 L G  G+PGT GT+G KG  GP G+RG  G  G+ G P 
Sbjct: 713 PAGPQGLQGPRGLPGTPGTDGPKGAIGPAGSRGAQGPQGLQGMPG 757



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 82/215 (38%), Gaps = 57/215 (26%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK-------------------- 139
           QG      E    G+ GP G +G++G KG  G  G+ G +                    
Sbjct: 750 QGLQGMPGERGAAGIPGPKGDRGDLGEKGPEGAAGKDGARGLTGPIGPPGPGGPNGEKGE 809

Query: 140 -------GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                  GAPG       +G PGD G+ GP G  G+ GP G  G  G +G +G+ G  G 
Sbjct: 810 SGPAGPSGAPGT------RGAPGDRGETGPPGPAGFAGPPGADGQPGTKGEQGEPGQKGE 863

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT------------------ 234
            G  G  G  G PG  G  G +G  G  G  G PG  G PG                   
Sbjct: 864 AGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPAGP 923

Query: 235 ------NGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                 +G  G +G  GP G +G +G+ G  G P 
Sbjct: 924 AGPPGKDGPKGVRGDPGPAGRQGDAGLRGPAGAPG 958



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 82/207 (39%), Gaps = 54/207 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G  GP G +G  G  G  G+KG RG       KG  G VG  G  G PG+ G  GP G  
Sbjct: 271 GPSGPQGARGFPGTPGLPGIKGHRGYPGLDGAKGETGAVGAKGEAGAPGESGAPGPMGPR 330

Query: 167 GYPGPQGIPGDEGKRGPKGD---------------------MGYPGRIGLDGRDGLPGEP 205
           G PG +G PG  G  G +G+                      G PG  G  G  G  G  
Sbjct: 331 GLPGERGRPGSTGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGSPGSKGEAGPTGARGPE 390

Query: 206 GLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGM------------------T 244
           G  G  G +G  G PG  G    PG DGIPG  G+ G  G+                  T
Sbjct: 391 GAQGPRGESGTPGSPGPSGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGAT 450

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRES 271
           GP G +G S      G P I  +K E+
Sbjct: 451 GPLGPKGTS------GDPGIAGFKGEA 471



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 72/162 (44%), Gaps = 18/162 (11%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            G+ G+ G +G  G +G RG  G PG+ G  G +G PG +G +G  G +G  G  G PG+
Sbjct: 261 AGKPGKSGERGPSGPQGARGFPGTPGLPGIKGHRGYPGLDGAKGETGAVGAKGEAGAPGE 320

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------------------GIPGRNGMDGI 219
            G  GP G  G PG  G  G  G  G  G D                  G PG  G  G 
Sbjct: 321 SGAPGPMGPRGLPGERGRPGSTGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGSPGSKGE 380

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G +G  G  G +G  G  GP G  G  G +G+PG 
Sbjct: 381 AGPTGARGPEGAQGPRGESGTPGSPGPSGASGNPGTDGIPGA 422



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 62/142 (43%), Gaps = 30/142 (21%)

Query: 152 GIPGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G PG  G+RGP   +G  G+PG  G+PG +G RG  G  G  G  G  G  G  G PG  
Sbjct: 262 GKPGKSGERGPSGPQGARGFPGTPGLPGIKGHRGYPGLDGAKGETGAVGAKGEAGAPGES 321

Query: 209 GIPGRNGMDGIPGKDGLPGKDG---------------------------IPGTNGTNGEK 241
           G PG  G  G+PG+ G PG  G                            PG+ G+ GE 
Sbjct: 322 GAPGPMGPRGLPGERGRPGSTGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGSPGSKGEA 381

Query: 242 GMTGPRGNRGKSGINGVPGTPA 263
           G TG RG  G  G  G  GTP 
Sbjct: 382 GPTGARGPEGAQGPRGESGTPG 403



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 86/211 (40%), Gaps = 63/211 (29%)

Query: 116  GPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDE------GKRGPKGDM 166
            GP G++G+ G +G  G  GE+G   E G  G  GP GPQG+ G        G+RG +G  
Sbjct: 940  GPAGRQGDAGLRGPAGAPGEKGDAGEDGPNGPSGPSGPQGLAGQRGIVGLPGQRGERGFP 999

Query: 167  GYPGPQGIPGDE---------------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G PGP G PG +               G  G  G  G PGR G  G DG PG  G  GI 
Sbjct: 1000 GLPGPSGEPGKQGAPGGPGDRGPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGSAGIK 1059

Query: 212  GRNGMDGI---------------------PGKDGLPGKDGIPGTNGTNGEKGMTGP---- 246
            G  G  G                       G  G PG  G  G +G  G +GM GP    
Sbjct: 1060 GDRGNTGPVGASGAPGAPGAPGPVGPTGKQGDRGEPGPQGPAGPSGPAGARGMPGPQGPR 1119

Query: 247  --------------RGNRGKSGINGVPGTPA 263
                          +G+RG +G+ G+PG P 
Sbjct: 1120 GDKGEAGEGGERGQKGHRGFTGLQGLPGPPG 1150



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 91/241 (37%), Gaps = 81/241 (33%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG-------------------- 137
            + G   +  E  PPG  G  G  G+ G  GE G+ G RG                    
Sbjct: 526 GLAGQKGAPGERGPPGASGAKGATGDPGRPGESGLPGARGLTGRPGDAGPQGKVGPSGAP 585

Query: 138 -------------EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP- 183
                         +G PGV+G PGP+G  G+ GK G KG +G PG +G+PG +G+ G  
Sbjct: 586 GEDGRPGPPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGLLGAPGLRGLPGKDGETGSA 645

Query: 184 -----------KGDMGYPG---------------------------------RIGLDGRD 199
                      +G+ G PG                                   G  G  
Sbjct: 646 GPPGPAGPAGERGEQGQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGATGPRGER 705

Query: 200 GLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G PGE    G  G+ G  G+ G PG DG  G  G  G+ G  G +G+ G  G RG +GI 
Sbjct: 706 GFPGERGPAGPQGLQGPRGLPGTPGTDGPKGAIGPAGSRGAQGPQGLQGMPGERGAAGIP 765

Query: 257 G 257
           G
Sbjct: 766 G 766



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 87/239 (36%), Gaps = 90/239 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAP------------GVVGPPGP---------------- 150
           G+KG +GA G  G+ G+ GE G+             G  G PGP                
Sbjct: 622 GEKGLLGAPGLRGLPGKDGETGSAGPPGPAGPAGERGEQGQPGPSGFQGLPGPPGPPGEG 681

Query: 151 -----------------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
                                  +G PG+   RGP G  G  GP+G+PG  G  GPKG +
Sbjct: 682 GKPGDQGVPGEAGAAGATGPRGERGFPGE---RGPAGPQGLQGPRGLPGTPGTDGPKGAI 738

Query: 188 GYPGRIGLDGRDGL---PGEPGLDGIP---------GRNGMDGIPGKDGL---------- 225
           G  G  G  G  GL   PGE G  GIP         G  G +G  GKDG           
Sbjct: 739 GPAGSRGAQGPQGLQGMPGERGAAGIPGPKGDRGDLGEKGPEGAAGKDGARGLTGPIGPP 798

Query: 226 --------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                          G  G PGT G  G++G TGP G  G +G  G  G P     + E
Sbjct: 799 GPGGPNGEKGESGPAGPSGAPGTRGAPGDRGETGPPGPAGFAGPPGADGQPGTKGEQGE 857



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 77/197 (39%), Gaps = 69/197 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------KGDM 166
           GQ G +G  G  G  GE G+ G  G++G PG +G+PG +G+ G             +G+ 
Sbjct: 601 GQPGVMGFPGPKGATGEPGKSGEKGLLGAPGLRGLPGKDGETGSAGPPGPAGPAGERGEQ 660

Query: 167 GYPGP---------------------------------------QGIPGDEGKRGPKGDM 187
           G PGP                                       +G PG+ G  GP+G  
Sbjct: 661 GQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGATGPRGERGFPGERGPAGPQG-- 718

Query: 188 GYPGRIGLDGRDGLPGEPGLD------GIPGRNGMDGIPGKDGLPGK---DGIPGTNGTN 238
                  L G  GLPG PG D      G  G  G  G  G  G+PG+    GIPG  G  
Sbjct: 719 -------LQGPRGLPGTPGTDGPKGAIGPAGSRGAQGPQGLQGMPGERGAAGIPGPKGDR 771

Query: 239 GEKGMTGPRGNRGKSGI 255
           G+ G  GP G  GK G 
Sbjct: 772 GDLGEKGPEGAAGKDGA 788


>gi|7271901|gb|AAF44681.1|AF239838_1 collagen IV a1 chain [Gallus gallus]
          Length = 979

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/163 (43%), Positives = 87/163 (53%), Gaps = 16/163 (9%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG +G   EMG+ G  GEKG PG+ G PG  G PG +G++G KG  G+PG  G PG  G
Sbjct: 319 QKGSVG---EMGLPGTPGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPG-IGFPGSPG 374

Query: 180 KRGPKGDMGYP---------GRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPG 227
           ++G  G  G P         G  G+ G  G P   G PG+ G PG  G+ G  G+ GLPG
Sbjct: 375 EKGEPGRTGSPGLSGDKGEKGNAGIPGMPGAPGPKGSPGIAGFPGSPGLHGAKGEKGLPG 434

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             GIPG  G  GE G+ GP G+ G+ G  G  G P     K E
Sbjct: 435 LSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGTAGAKGE 477



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 89/173 (51%), Gaps = 15/173 (8%)

Query: 112 PGLQGPIGQKGEIGAKG--EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           PG  G  G+KG+ GA G   +G  G  GEKG PG  G PG  G  G++G  G  G  G P
Sbjct: 347 PGFPGQKGEKGDKGAAGFPGIGFPGSPGEKGEPGRTGSPGLSGDKGEKGNAGIPGMPGAP 406

Query: 170 GPQG------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           GP+G       PG  G  G KG+ G PG  G+ G  G PGEPG+ G  G  G  G PG D
Sbjct: 407 GPKGSPGIAGFPGSPGLHGAKGEKGLPGLSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYD 466

Query: 224 GLP------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G+P      G+ G+PG  G  G  G  G +G +G+ G  G PG P I   K E
Sbjct: 467 GIPGTAGAKGEQGVPG-RGVPGYPGAKGDKGAKGEVGFPGSPGIPGIPGLKGE 518



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 80/218 (36%), Positives = 99/218 (45%), Gaps = 59/218 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDEGKRGP 162
           PG +G  G KG +G +GE GVKG++GE G PG+ G           G +G PG++G  GP
Sbjct: 212 PGEKGSQGLKGVVGPQGEPGVKGDKGEAGLPGIPGSMDTMDMVSLKGQKGDPGEKGDLGP 271

Query: 163 KGDMGY---------PGPQGIPGDEGKRGPKGD---------------------MGYPGR 192
            G+ G          PG  G PG  G+ GPKGD                     MG PG 
Sbjct: 272 TGEKGLRGEYGEPGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPGT 331

Query: 193 IGLDGRDGLPGEPGLDGIPGRN--------------GMDGIPGKDGLPGKDGIPGTNGTN 238
            G  G  G+PG PG  G PG+               G  G PG+ G PG+ G PG +G  
Sbjct: 332 PGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPGIGFPGSPGEKGEPGRTGSPGLSGDK 391

Query: 239 GEK------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           GEK      GM G  G +G  GI G PG+P +   K E
Sbjct: 392 GEKGNAGIPGMPGAPGPKGSPGIAGFPGSPGLHGAKGE 429



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 89/173 (51%), Gaps = 25/173 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---------APGVVGPPGPQGIPGDEGKRGPK 163
           G  G  G+KGE G  G  G+ G++GEKG         APG  G PG  G PG  G  G K
Sbjct: 368 GFPGSPGEKGEPGRTGSPGLSGDKGEKGNAGIPGMPGAPGPKGSPGIAGFPGSPGLHGAK 427

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGL---DGIPGRNGMD 217
           G+ G PG  GIPG +G+ G  G  G  G IG  G    DG+PG  G     G+PGR G+ 
Sbjct: 428 GEKGLPGLSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGTAGAKGEQGVPGR-GVP 486

Query: 218 GIPGKD---------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G PG           G PG  GIPG  G  GE+G  GP G +G  G+ G+PG+
Sbjct: 487 GYPGAKGDKGAKGEVGFPGSPGIPGIPGLKGEQGYAGPPGPKGNQGLPGLPGS 539



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 96/192 (50%), Gaps = 42/192 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGY 168
           PG QG +G KG  GAKGEMGV G       PG+ G PGP   +G+PG++G +G KG +  
Sbjct: 173 PGPQGSVGLKGSAGAKGEMGVMG------TPGLPGTPGPVGDRGLPGEKGSQGLKGVV-- 224

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            GPQG PG +G +G  G  G PG       + L G+ G PGE G  G  G  G+ G  G+
Sbjct: 225 -GPQGEPGVKGDKGEAGLPGIPGSMDTMDMVSLKGQKGDPGEKGDLGPTGEKGLRGEYGE 283

Query: 223 DGLPGKDGIPGT------------------------NGTNGEKGMTGPRGNRGKSGINGV 258
            G+PG+DG PGT                         G+ GE G+ G  G +G  GI G 
Sbjct: 284 PGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPGTPGEKGLPGIPGS 343

Query: 259 PGTPAICAYKRE 270
           PGTP     K E
Sbjct: 344 PGTPGFPGQKGE 355



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 90/183 (49%), Gaps = 35/183 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG-------------- 158
           G +G  G+KG++G  GE G++GE GE G PG  G PG  G PG +G              
Sbjct: 258 GQKGDPGEKGDLGPTGEKGLRGEYGEPGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGIP 317

Query: 159 -KRGPKGDMGYPG------------PQGIPGDEGKRGPKGD--------MGYPGRIGLDG 197
            ++G  G+MG PG              G PG  G++G KGD        +G+PG  G  G
Sbjct: 318 GQKGSVGEMGLPGTPGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPGIGFPGSPGEKG 377

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G PGL G  G  G  GIPG  G PG  G PG  G  G  G+ G +G +G  G++G
Sbjct: 378 EPGRTGSPGLSGDKGEKGNAGIPGMPGAPGPKGSPGIAGFPGSPGLHGAKGEKGLPGLSG 437

Query: 258 VPG 260
           +PG
Sbjct: 438 IPG 440



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 78/151 (51%), Gaps = 15/151 (9%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G KG+ G +G+ G  G+ G+ G PGPQG  G +G  G KG+MG     G PG  G  GP 
Sbjct: 150 GPKGDKGSQGQPGVPGSVGLPGLPGPQGSVGLKGSAGAKGEMGV---MGTPGLPGTPGPV 206

Query: 185 GDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTN 235
           GD G PG  G  G  G+    GEPG+ G  G  G+ GIPG         L G+ G PG  
Sbjct: 207 GDRGLPGEKGSQGLKGVVGPQGEPGVKGDKGEAGLPGIPGSMDTMDMVSLKGQKGDPGEK 266

Query: 236 ---GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G  GEKG+ G  G  G  G +G PGTP 
Sbjct: 267 GDLGPTGEKGLRGEYGEPGIPGRDGEPGTPG 297



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 68/122 (55%), Gaps = 10/122 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGD 165
           PGL G  G+KG  G  G  G+KGE GE G PG  G       PG  GIPG  G +G +G 
Sbjct: 421 PGLHGAKGEKGLPGLSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGTAGAKGEQGV 480

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G  G PG +G +G KG++G+PG  G+ G  GL GE G  G PG  G  G+P   GL
Sbjct: 481 PGR-GVPGYPGAKGDKGAKGEVGFPGSPGIPGIPGLKGEQGYAGPPGPKGNQGLP---GL 536

Query: 226 PG 227
           PG
Sbjct: 537 PG 538



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 92/195 (47%), Gaps = 45/195 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
           PG+ GP G  GE   KG  G+ G RGE+G PGV   PG QG  GD G  G          
Sbjct: 55  PGIPGPAGIPGE---KGNPGLPGLRGEQGFPGV---PGQQGFRGDPGLPGLQGLPGPQGS 108

Query: 163 --------------------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                                     KG+ G+PG   IPG +   GPKGD G  G+ G+ 
Sbjct: 109 PGVGPPGLPGPAGQPGPEGPPGFPGIKGERGFPG---IPGLD-MPGPKGDKGSQGQPGVP 164

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  GLPG PG  G  G  G  G  G+ G+ G  G+PGT G  G++G+ G +G++G  G+ 
Sbjct: 165 GSVGLPGLPGPQGSVGLKGSAGAKGEMGVMGTPGLPGTPGPVGDRGLPGEKGSQGLKGVV 224

Query: 257 GVPGTPAICAYKRES 271
           G  G P +   K E+
Sbjct: 225 GPQGEPGVKGDKGEA 239



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 86/197 (43%), Gaps = 46/197 (23%)

Query: 125 GAKGEMGVKGE-----RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           G  G  G KGE      G KG PG+   PGP GIPG++G  G  G  G    QG PG  G
Sbjct: 33  GTPGLQGQKGEPGVGLPGPKGLPGI---PGPAGIPGEKGNPGLPGLRGE---QGFPGVPG 86

Query: 180 KRGPKGDMGYPGRIGL--------------------------------DGRDGLPGEPGL 207
           ++G +GD G PG  GL                                 G  G PG PGL
Sbjct: 87  QQGFRGDPGLPGLQGLPGPQGSPGVGPPGLPGPAGQPGPEGPPGFPGIKGERGFPGIPGL 146

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           D +PG  G  G  G+ G+PG  G+PG  G  G  G+ G  G +G+ G+ G PG P     
Sbjct: 147 D-MPGPKGDKGSQGQPGVPGSVGLPGLPGPQGSVGLKGSAGAKGEMGVMGTPGLPGTPGP 205

Query: 268 KRESCSLLPNSETSQLL 284
             +    LP  + SQ L
Sbjct: 206 VGDRG--LPGEKGSQGL 220



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 57/114 (50%), Gaps = 13/114 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQG 152
           L  + G      E   PG  G IGQKGE G     G  G KGE+G  G        G  G
Sbjct: 435 LSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGTAGAKGEQGVPGR-------GVPG 487

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            PG +G +G KG++G+PG  GIPG  G    KG+ GY G  G  G  GLPG PG
Sbjct: 488 YPGAKGDKGAKGEVGFPGSPGIPGIPGL---KGEQGYAGPPGPKGNQGLPGLPG 538



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 194 GLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G  GL    GEPG+ G+PG  G+ GIPG  G+PG+ G PG  G  GE+G  G  G +
Sbjct: 30  GFPGTPGLQGQKGEPGV-GLPGPKGLPGIPGPAGIPGEKGNPGLPGLRGEQGFPGVPGQQ 88

Query: 251 GKSGINGVPG 260
           G  G  G+PG
Sbjct: 89  GFRGDPGLPG 98


>gi|432883658|ref|XP_004074315.1| PREDICTED: collagen alpha-2(XI) chain-like [Oryzias latipes]
          Length = 1732

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 84/158 (53%), Gaps = 12/158 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGD 165
           PG QG  G +G IG  GE G  G+ G  G PG  GPPG      P G  G++G  GP+G 
Sbjct: 682 PGTQGMPGPQGAIGPHGEKGPTGKPGLPGMPGADGPPGHPGKEGPPGTKGNQGPNGPQGA 741

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +GYPGP+GI G +G RG KG  G        G DG PG  G  G+ G  G  G+PG  G 
Sbjct: 742 IGYPGPRGIKGAQGIRGLKGHKGE------KGEDGFPGIKGDFGVKGERGEAGLPGPRGE 795

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G +G  G  G  GE G  G  G +GK G+ G+PG P 
Sbjct: 796 DGPEGPKGRVGPPGEIGPIGTVGEKGKLGVPGLPGYPG 833



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/160 (44%), Positives = 85/160 (53%), Gaps = 15/160 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QG IG  G  G KG  G++G +G KG  G  G PG   I GD G +G +G+ G PG
Sbjct: 735 PNGPQGAIGYPGPRGIKGAQGIRGLKGHKGEKGEDGFPG---IKGDFGVKGERGEAGLPG 791

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIG---LDGRDGLPGEPGLDGIPGRN------GMDGIPG 221
           P+G   ++G  GPKG +G PG IG     G  G  G PGL G PGR       G  G PG
Sbjct: 792 PRG---EDGPEGPKGRVGPPGEIGPIGTVGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPG 848

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            +G  G  G+ G  G  G++G TGPRG RG  G  G  G 
Sbjct: 849 SNGEKGTRGVSGKQGPRGQRGPTGPRGQRGPRGATGKAGA 888



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 91/202 (45%), Gaps = 51/202 (25%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKR------- 160
           PPG  G  G+ G +G+ G  G+KGE G+   PG  GP GPQG+   PG  G+R       
Sbjct: 516 PPGPMGFTGRPGPLGSPGSPGLKGEGGD---PGPQGPRGPQGVMGPPGKSGRRGRAGADG 572

Query: 161 --------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                   G KGD G+ G  G+PGD+G RG  G +G PG  G DG  G  G+ G  G+PG
Sbjct: 573 ARGMPGEPGTKGDRGFDGLPGLPGDKGHRGDSGPLGPPGSQGEDGERGDDGDVGPRGLPG 632

Query: 213 RNGMDG---------------IPGKDGLPGKDG---------------IPGTNGTNGEKG 242
             G  G               + G DG  G  G                PGT G  G +G
Sbjct: 633 EPGPRGLLGPKGPPGIAGPPGVRGNDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQG 692

Query: 243 MTGPRGNRGKSGINGVPGTPAI 264
             GP G +G +G  G+PG P  
Sbjct: 693 AIGPHGEKGPTGKPGLPGMPGA 714



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 68/128 (53%), Gaps = 6/128 (4%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +G  G  G  G PGP G PG  G +G  GD   PGPQG  G +G  GP G  G  GR G 
Sbjct: 514 KGPPGPMGFTGRPGPLGSPGSPGLKGEGGD---PGPQGPRGPQGVMGPPGKSGRRGRAGA 570

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           DG  G+PGEPG  G  G +G+ G+PG  G  G  G  G  G+ GE G    RG+ G  G 
Sbjct: 571 DGARGMPGEPGTKGDRGFDGLPGLPGDKGHRGDSGPLGPPGSQGEDGE---RGDDGDVGP 627

Query: 256 NGVPGTPA 263
            G+PG P 
Sbjct: 628 RGLPGEPG 635



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 89/187 (47%), Gaps = 39/187 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G+ G  G KG+ G  G  G+ G++G +G  G +GPPG QG  G   D+G  GP+G  G P
Sbjct: 575 GMPGEPGTKGDRGFDGLPGLPGDKGHRGDSGPLGPPGSQGEDGERGDDGDVGPRGLPGEP 634

Query: 170 GPQG---------------IPGDEGKRGPKGDM------------------GYPGRIGLD 196
           GP+G               + G++G  GPKG++                  G PG  G  
Sbjct: 635 GPRGLLGPKGPPGIAGPPGVRGNDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGAI 694

Query: 197 GRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G  G  G  G+PG  G DG    PGK+G PG  G  G NG  G  G  GPRG +G  
Sbjct: 695 GPHGEKGPTGKPGLPGMPGADGPPGHPGKEGPPGTKGNQGPNGPQGAIGYPGPRGIKGAQ 754

Query: 254 GINGVPG 260
           GI G+ G
Sbjct: 755 GIRGLKG 761



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 97/225 (43%), Gaps = 49/225 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQG------------- 152
           PGL G  G +G+ G  G  G +GE GE+G  G VGP      PGP+G             
Sbjct: 592 PGLPGDKGHRGDSGPLGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGP 651

Query: 153 --IPGDEGKRGPKGDM------------------GYPGPQGIPGDEGKRGPKGDMGYPGR 192
             + G++G  GPKG++                  G PGPQG  G  G++GP G  G PG 
Sbjct: 652 PGVRGNDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGAIGPHGEKGPTGKPGLPGM 711

Query: 193 IGLDGRDGLPGE---PGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G DG  G PG+   PG  G  G NG  G    PG  G+ G  GI G  G  GEKG  G 
Sbjct: 712 PGADGPPGHPGKEGPPGTKGNQGPNGPQGAIGYPGPRGIKGAQGIRGLKGHKGEKGEDGF 771

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVG 291
            G +G  G+ G  G   +   + E     P         PP  +G
Sbjct: 772 PGIKGDFGVKGERGEAGLPGPRGEDGPEGPKGRVG----PPGEIG 812



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 81/177 (45%), Gaps = 39/177 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------------GPQGIPG 155
            P G  G  G  GE+G +G+ G KGERGE G  G  G P               GP G  G
Sbjct: 1224 PVGFPGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSPGPPGENGPPGPLGKRGPAGTRG 1283

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             EG++G KG  G PG  G PG   K GP G  G PG+ G +G  GLPG  G  G PG  G
Sbjct: 1284 PEGRQGEKGTKGDPGAVGPPG---KTGPVGPQGQPGKPGTEGLRGLPGSVGEQGSPGAAG 1340

Query: 216  ---------------MDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRG 251
                           + G PG  G  G  G+      PG  G  G++G+ GP+G+ G
Sbjct: 1341 QKGPPGPVGPAGLPGLRGDPGAKGEKGHQGLIGLVGAPGEQGEKGDRGLPGPQGSTG 1397



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 81/179 (45%), Gaps = 39/179 (21%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---------------GPPGPQG 152
            E   PG  GP G  GE G KG  G +GE+GE G PG                 G PGP G
Sbjct: 1167 EKGEPGESGPPGVVGEPGKKGPRGERGEKGEAGQPGTPGPAGGRGRPGDDGPKGNPGPVG 1226

Query: 153  IPGD---EGKRGPKGDMGYPGPQGIPGDEG------------------KRGPKGDMGYPG 191
             PGD    G+ GP+G  G  G +G  G++G                  KRGP G  G  G
Sbjct: 1227 FPGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSPGPPGENGPPGPLGKRGPAGTRGPEG 1286

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            R    G  G  G+PG  G PG+ G  G  G+ G PG +G+ G  G+ GE+G  G  G +
Sbjct: 1287 R---QGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGSPGAAGQK 1342



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 86/216 (39%), Gaps = 48/216 (22%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA-------------- 141
           L   +G    +    PPG QG  G++G+ G  G  G+ GE G +G               
Sbjct: 594 LPGDKGHRGDSGPLGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGPPG 653

Query: 142 ----PGVVGP------------------PGPQGIPGDEGKRGPKGDM---------GYPG 170
                G  GP                  PG QG+PG +G  GP G+          G PG
Sbjct: 654 VRGNDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGAIGPHGEKGPTGKPGLPGMPG 713

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPG 227
             G PG  GK GP G  G  G  G  G  G PG  G+    GI G  G  G  G+DG PG
Sbjct: 714 ADGPPGHPGKEGPPGTKGNQGPNGPQGAIGYPGPRGIKGAQGIRGLKGHKGEKGEDGFPG 773

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G  GE G+ GPRG  G  G  G  G P 
Sbjct: 774 IKGDFGVKGERGEAGLPGPRGEDGPEGPKGRVGPPG 809



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 70/127 (55%), Gaps = 3/127 (2%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            +GP G +G  G +GE G KG+ G  G PG  GP GPQG PG  G  G +G  G  G QG 
Sbjct: 1276 RGPAGTRGPEGRQGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGS 1335

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
            PG  G++GP G +G  G  GL G  G  GE G  G+    G+ G PG+ G  G  G+PG 
Sbjct: 1336 PGAAGQKGPPGPVGPAGLPGLRGDPGAKGEKGHQGL---IGLVGAPGEQGEKGDRGLPGP 1392

Query: 235  NGTNGEK 241
             G+ G K
Sbjct: 1393 QGSTGAK 1399



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 67/171 (39%), Gaps = 42/171 (24%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------------------MGYPGPQGI 174
            KGE GE G PGVVG PG +G  G+ G++G  G                    G PGP G 
Sbjct: 1168 KGEPGESGPPGVVGEPGKKGPRGERGEKGEAGQPGTPGPAGGRGRPGDDGPKGNPGPVGF 1227

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------------------------GLDGI 210
            PGD G  G  G  G  G  G  G DG  GE                         G +G 
Sbjct: 1228 PGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSPGPPGENGPPGPLGKRGPAGTRGPEGR 1287

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G PG  G PGK G  G  G  G+ G  G RG  G  G  G PG 
Sbjct: 1288 QGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGSPGA 1338



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 58/133 (43%), Gaps = 51/133 (38%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPG------------VVGPPGP------- 150
           GL+G  G+KGE    G KG+ GVKGERGE G PG             VGPPG        
Sbjct: 758 GLKGHKGEKGEDGFPGIKGDFGVKGERGEAGLPGPRGEDGPEGPKGRVGPPGEIGPIGTV 817

Query: 151 --------QGIPGDEGKRGPKGDMGYPG---------------------PQGIPGDEGKR 181
                    G+PG  G++GPKG +G+PG                      +G  G  G+R
Sbjct: 818 GEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGSNGEKGTRGVSGKQGPRGQRGPTGPRGQR 877

Query: 182 GPKGDMGYPGRIG 194
           GP+G  G  G  G
Sbjct: 878 GPRGATGKAGAKG 890



 Score = 40.0 bits (92), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 60/171 (35%), Gaps = 56/171 (32%)

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------------GL 201
            KG+ G  GP G+ G+ GK+GP+G+ G  G  G  G                       G 
Sbjct: 1168 KGEPGESGPPGVVGEPGKKGPRGERGEKGEAGQPGTPGPAGGRGRPGDDGPKGNPGPVGF 1227

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGK------------------------------DGI 231
            PG+PG  G  G  G DG  G+ G  G+                              +G 
Sbjct: 1228 PGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSPGPPGENGPPGPLGKRGPAGTRGPEGR 1287

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
             G  GT G+ G  GP G  G  G  G PG P       E    LP S   Q
Sbjct: 1288 QGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGT-----EGLRGLPGSVGEQ 1333


>gi|297270316|ref|XP_001096937.2| PREDICTED: collagen alpha-1(XXVII) chain-like, partial [Macaca
           mulatta]
          Length = 669

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 92/167 (55%), Gaps = 16/167 (9%)

Query: 133 KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G EG +G +G  G 
Sbjct: 163 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGA 222

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
           PGR G+ G  GLPG     G+ GR G++GI G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 223 PGRRGVQGLQGLPGP---RGVVGRQGLEGIAGADGLPGRDGQVGQQGEQGDDGDPGPMGP 279

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
            G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 280 AGKRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 319



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 83/163 (50%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G+ G  G+ GV+G RG+ G  G  G PGP+G PG +G +G +G  G  G  G PG  
Sbjct: 167 GEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPG-- 224

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---------------------GMD 217
            +RG +G  G PG  G+ GR GL G  G DG+PGR+                     G  
Sbjct: 225 -RRGVQGLQGLPGPRGVVGRQGLEGIAGADGLPGRDGQVGQQGEQGDDGDPGPMGPAGKR 283

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  GLPG  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 284 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLPG 326



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G++G  G  G  G +G    +GE G PG +GPPG         KRG +G  G 
Sbjct: 274 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGRTGL 324

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 325 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGP 384

Query: 229 DGIPGTNGTNGEKGMTGPRGNRG 251
            GI G +G  G KG  G RG+ G
Sbjct: 385 LGILGPSGLPGPKGDKGSRGDWG 407



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 95/205 (46%), Gaps = 45/205 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP------GVVGPPGPQ 151
            +QG      +   PG  GP G+ G  G+KG  G KG++G+ GAP      G+ G PGP+
Sbjct: 179 GVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPR 238

Query: 152 GIPGDE------------------------------------GKRGPKGDMGYPGPQGIP 175
           G+ G +                                    GKRG  G  G PG QG P
Sbjct: 239 GVVGRQGLEGIAGADGLPGRDGQVGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 298

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G +G+ G  G +G PG+ G +GR GLP   GEPG  G PG +G  G PG  GL G  G P
Sbjct: 299 GFKGESGLPGQLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPP 358

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G +G  GP G  GK GI G
Sbjct: 359 GDIGFKGIQGPRGPPGLMGKEGIIG 383



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 98/246 (39%), Gaps = 60/246 (24%)

Query: 77  QNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER 136
           Q S   N  +W +  + +P   +  F +         LQGP G+ G+ G KG  G KG +
Sbjct: 12  QKSADGNQVLWSDHLANLPQCLL--FSHLFLALSLLSLQGPEGKSGKQGEKGRTGAKGAK 69

Query: 137 GEKGAPGVV------------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGI---- 174
           G +G  G +                  G  GP G PG  G +G  G  GY G +GI    
Sbjct: 70  GYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIVGPL 129

Query: 175 ------------------------------PGDEGKRGPKGDMGYPGRIGLD------GR 198
                                          GD G RG  GD GYPG+ G+       G+
Sbjct: 130 GPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGKPGQ 189

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G PG PG  G PG  G  G  G  G  GK G PG  G  G +G+ GPRG  G+ G+ G+
Sbjct: 190 QGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGI 249

Query: 259 PGTPAI 264
            G   +
Sbjct: 250 AGADGL 255



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 54/100 (54%), Gaps = 12/100 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
           +  PPG +G  G+ G  G +GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 309 QLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQG 368

Query: 159 KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
            RGP G MG     GP GI G  G  GPKGD G  G  GL
Sbjct: 369 PRGPPGLMGKEGIIGPLGILGPSGLPGPKGDKGSRGDWGL 408


>gi|395821643|ref|XP_003784147.1| PREDICTED: collagen alpha-1(XI) chain isoform 2 [Otolemur
           garnettii]
          Length = 1811

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 82/145 (56%), Gaps = 9/145 (6%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G  G +G  G+ G+ GP+G+ G  GP+G     
Sbjct: 768 GVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKG----- 822

Query: 179 GKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            + GP GD+G PG+ G  G+    GLPG PG  G  G  G  G PG +G  G  G+ G  
Sbjct: 823 -RAGPTGDLGPPGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKP 881

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G++G TGPRG+RG  G  G PG
Sbjct: 882 GPRGQRGPTGPRGSRGARGPTGKPG 906



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 58/119 (48%), Gaps = 24/119 (20%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDE 178
            G  G +GE G KGE G +G  G  GP GPQG     GK GP+G  G PGP   QG+PG  
Sbjct: 1374 GAEGRQGEKGAKGEAGAEGPSGKTGPVGPQGP---AGKPGPEGLRGIPGPVGEQGLPGAA 1430

Query: 179  GKR------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G+                   G KG+ G+PG IGL G  G  GE G  G+PG  G  G 
Sbjct: 1431 GQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGA 1489



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           + ++G      +  P G  GP G KG  G  G++G  G+ GEKG  GV       G+PG 
Sbjct: 797 MGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDLGPPGQAGEKGKLGVP------GLPGY 850

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            G++GPKG  G+P   G PG  G++G +G  G PG  G  G  G  G  G  G  G+ G
Sbjct: 851 PGRQGPKGSTGFP---GFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPG 906



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 68/127 (53%), Gaps = 9/127 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G+ G +G  GV+G  G  G PG  G PG  G  G  G+ G KGD G+ G  G+PGD+
Sbjct: 558 GESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPGLPGDK 617

Query: 179 GKRGPK---------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G RG +         GD G  G  G  G  GLPGE G  G+ G  G  GIPG+ G+ G D
Sbjct: 618 GHRGERGPQGPPGAPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGIPGQPGMAGVD 677

Query: 230 GIPGTNG 236
           G PG  G
Sbjct: 678 GPPGPKG 684



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 60/122 (49%), Gaps = 33/122 (27%)

Query: 112 PGLQGPIG------------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           PG QGP G            ++G  GA G  G+ GE G KG  G  G PG   +PGD+G 
Sbjct: 563 PGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPG---LPGDKGH 619

Query: 160 RGPK---------------GDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGL 201
           RG +               G+ G  GP+G+PG+ G R   GP+G  G PG+ G+ G DG 
Sbjct: 620 RGERGPQGPPGAPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGIPGQPGMAGVDGP 679

Query: 202 PG 203
           PG
Sbjct: 680 PG 681



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 71/147 (48%), Gaps = 27/147 (18%)

Query: 144 VVGPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           + GPPGP G+       G  G  G KG+ G PGPQG  G +G  GP G  G  GR G DG
Sbjct: 532 LRGPPGPMGLTGRPGPVGGPGSAGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADG 591

Query: 198 RDGLPGEPG------LDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTNG 239
             G+PGEPG       DG+PG  G  G  G+            DG+ G+DG  G  G  G
Sbjct: 592 GRGMPGEPGSKGDRGFDGLPGLPGDKGHRGERGPQGPPGAPGDDGMRGEDGEIGPRGLPG 651

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICA 266
           E    GPRG  G  G  G+PG P +  
Sbjct: 652 E---AGPRGLLGPRGTPGIPGQPGMAG 675



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 82/214 (38%), Gaps = 69/214 (32%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---------- 168
           G+ GEIG +G  G  G RG  G  G  G PG  G+ G +G  GPKG+MG           
Sbjct: 639 GEDGEIGPRGLPGEAGPRGLLGPRGTPGIPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQ 698

Query: 169 --PGPQ------------------------------GIPGDEGKRGPKGD---------- 186
             PGPQ                              G PG  GK G  G+          
Sbjct: 699 GNPGPQGLPGPQGPIGPPGEKGPQGKPGLGGLPGADGPPGHPGKEGQSGEKGALGPPGPQ 758

Query: 187 --------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                    G  G  G+ G  G  GE G DG PG  G  G+ G  G  G+ G  G +G  
Sbjct: 759 GPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPE 818

Query: 239 GEKGMTGPRGN---------RGKSGINGVPGTPA 263
           G KG  GP G+         +GK G+ G+PG P 
Sbjct: 819 GPKGRAGPTGDLGPPGQAGEKGKLGVPGLPGYPG 852



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 60/145 (41%), Gaps = 45/145 (31%)

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------- 179
            G  G  G PGPQGI    GK GP G  G+PG +G+PG +G                    
Sbjct: 1008 GKEGAKGDPGPQGI---SGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP 1064

Query: 180  -KRGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
             +RG  G                     + G PG  G  G  G  G  G  G+PG  G  
Sbjct: 1065 GERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPA 1124

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG+DG  G+ G PG  G+ G+KG
Sbjct: 1125 GSPGEDGDKGEIGEPGQKGSKGDKG 1149



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 21/102 (20%)

Query: 138  EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            EKGAPG  GP GP G      + G +G +G PGP G  G  G+ G KG++G PG+ G  G
Sbjct: 1093 EKGAPGEKGPQGPAG------RDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKG 1146

Query: 198  RDG---------------LPGEPGLDGIPGRNGMDGIPGKDG 224
              G                PG  G DG PG  G  G+ G+ G
Sbjct: 1147 DKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1188



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 77/184 (41%), Gaps = 51/184 (27%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------------ 163
            G+ GAKG+ G +G  G+ G  G+ G PG +G+PG +G  G K                  
Sbjct: 1008 GKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGER 1067

Query: 164  GDMGYPGP------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  G  GP                  +G PG++G +GP G  G  G +GL G  G  G P
Sbjct: 1068 GSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSP 1127

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKD------------GIPGTNGTNGEKGMTGPRGNRGKS 253
            G DG  G  G  G  G  G  G++            G PG  G +GE    GPRG +G  
Sbjct: 1128 GEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGE---PGPRGQQGMF 1184

Query: 254  GING 257
            G  G
Sbjct: 1185 GQKG 1188



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 90/239 (37%), Gaps = 90/239 (37%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---------KGERGEK------------GAPGVVGPPGP 150
           PG  G  G  GE G+KG+ G          KG RGE+            G  G  G  GP
Sbjct: 587 PGADGGRGMPGEPGSKGDRGFDGLPGLPGDKGHRGERGPQGPPGAPGDDGMRGEDGEIGP 646

Query: 151 QGIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGY------------PG---- 191
           +G+PG+ G RG   P+G  G PG  G+ G +G  GPKG+MG             PG    
Sbjct: 647 RGLPGEAGPRGLLGPRGTPGIPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGL 706

Query: 192 --------------------RIGLDGRDGLPGEPGLDG---------------------- 209
                                 GL G DG PG PG +G                      
Sbjct: 707 PGPQGPIGPPGEKGPQGKPGLGGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGP 766

Query: 210 --IPGRNGMDGIPGKDGLPGKDGIP------GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             + G +G+ G+ G  G  G+DG P      G  G  GE G  GPRG  G  G  G  G
Sbjct: 767 RGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAG 825



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 73/170 (42%), Gaps = 45/170 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERG------------EKGAPGVVGP----------- 147
            P GL+G  G++G  GA+G  G+KG  G            E+G+ G  GP           
Sbjct: 1027 PAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG 1086

Query: 148  ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                 G +G PG++G +GP G  G  GP G+P      GP G  G PG  G  G  G PG
Sbjct: 1087 PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP------GPAGPAGSPGEDGDKGEIGEPG 1140

Query: 204  EPGLDGIPGRNGMD------------GIPGKDGLPGKDGIPGTNGTNGEK 241
            + G  G  G NG              GI G DG PG  G  G  G  G++
Sbjct: 1141 QKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDE 1190



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 52/111 (46%), Gaps = 15/111 (13%)

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G  G QG  G +G+ G +G  G  G +G  G  G PG  GL GIPG  G  G+PG  G 
Sbjct: 1373 AGAEGRQGEKGAKGEAGAEGPSGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQ 1432

Query: 226  PGKDGI------------PGTNGTNGEK---GMTGPRGNRGKSGINGVPGT 261
             G  G             PG+ G  G     G+ GP G +G+ G  G+PGT
Sbjct: 1433 DGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGT 1483


>gi|348517853|ref|XP_003446447.1| PREDICTED: collagen alpha-1(I) chain-like isoform 2 [Oreochromis
           niloticus]
          Length = 1451

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 86/168 (51%), Gaps = 12/168 (7%)

Query: 112 PGLQGPIGQ---------KGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGK 159
           PG QG +G+          GE GA G  G +G+RG   E+GAPG +GP G +G PG  G 
Sbjct: 634 PGPQGAVGETGKPGEQGVPGEAGAPGPAGARGDRGFPGERGAPGAIGPAGARGSPGASGN 693

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G KGD G PG  G  G  G +G  G+ G  G  GL G  G  G  G DG PG++G  G+
Sbjct: 694 DGAKGDAGAPGTPGAQGPPGLQGMPGERGAAGLPGLRGNRGDQGPKGADGTPGKDGPRGL 753

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G  GLPG  G PG  G  G +G  GP G RG  G  G  G P    +
Sbjct: 754 TGPIGLPGPAGSPGDKGEPGAQGPVGPSGARGPPGERGEAGPPGPAGF 801



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 89/198 (44%), Gaps = 39/198 (19%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK-------- 159
           E   PG  GP G +G  GA G  G KG+ G  G PG  GPPG QG+PG+ G         
Sbjct: 672 ERGAPGAIGPAGARGSPGASGNDGAKGDAGAPGTPGAQGPPGLQGMPGERGAAGLPGLRG 731

Query: 160 ----RGPKGDMGYP---------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
               +GPKG  G P         GP G+PG  G  G KG+ G  G +G  G  G PGE G
Sbjct: 732 NRGDQGPKGADGTPGKDGPRGLTGPIGLPGPAGSPGDKGEPGAQGPVGPSGARGPPGERG 791

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------------------GMTGPRG 248
             G PG  G  G PG DG PG  G PG NG  G+                   G TGP+G
Sbjct: 792 EAGPPGPAGFAGPPGADGQPGAKGEPGDNGAKGDSGPPGPAGPTGAPGPQGPVGNTGPKG 851

Query: 249 NRGKSGINGVPGTPAICA 266
            RG +G  G  G P    
Sbjct: 852 ARGPAGPPGATGFPGAAG 869



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 89/183 (48%), Gaps = 21/183 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VKGERGEKG 140
           ++   G   +  E   PG +G +G  G  GA G+ G                +GE+G  G
Sbjct: 567 VMGFPGPKGAAGEAGKPGERGTMGPTGPAGAPGKDGDVGAQGPPGPAGPAGERGEQGPAG 626

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK---GDMGYPGRIGLDG 197
           +PG  G PGPQG  G+ GK    G+ G PG  G PG  G RG +   G+ G PG IG  G
Sbjct: 627 SPGFQGLPGPQGAVGETGK---PGEQGVPGEAGAPGPAGARGDRGFPGERGAPGAIGPAG 683

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G PG  G DG  G  G  G PG  G PG  G+PG  G  G  G+ G RG++G  G +G
Sbjct: 684 ARGSPGASGNDGAKGDAGAPGTPGAQGPPGLQGMPGERGAAGLPGLRGNRGDQGPKGADG 743

Query: 258 VPG 260
            PG
Sbjct: 744 TPG 746



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 90/215 (41%), Gaps = 54/215 (25%)

Query: 104 NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------- 147
            +T E   PGL GP G  GE G  GE G+ G +G  G+PG  GP                
Sbjct: 494 GATGERGAPGLVGPKGATGEPGRTGEPGLPGAKGMTGSPGNPGPDGKIGPSGAPGQDGRP 553

Query: 148 -----------------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG----------- 179
                            PGP+G  G+ GK G +G MG  GP G PG +G           
Sbjct: 554 GPPGPGGARGQPGVMGFPGPKGAAGEAGKPGERGTMGPTGPAGAPGKDGDVGAQGPPGPA 613

Query: 180 ----KRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGK---DGLPGKD 229
               +RG +G  G PG  GL G  G  GE   PG  G+PG  G  G  G     G PG+ 
Sbjct: 614 GPAGERGEQGPAGSPGFQGLPGPQGAVGETGKPGEQGVPGEAGAPGPAGARGDRGFPGER 673

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG  G  G +G  G  GN G  G  G PGTP  
Sbjct: 674 GAPGAIGPAGARGSPGASGNDGAKGDAGAPGTPGA 708



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 88/210 (41%), Gaps = 45/210 (21%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +GF  S     P G  G  G  G +G KG  G  G  GE G PG  G  G  G PG +GK
Sbjct: 481 RGFPGSDGPAGPKGATGERGAPGLVGPKGATGEPGRTGEPGLPGAKGMTGSPGNPGPDGK 540

Query: 160 RGPKGD---------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            GP G                      MG+PGP+G  G+ GK G +G MG  G  G  G+
Sbjct: 541 IGPSGAPGQDGRPGPPGPGGARGQPGVMGFPGPKGAAGEAGKPGERGTMGPTGPAGAPGK 600

Query: 199 DG---------------------LPGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGT 234
           DG                       G PG  G+PG  G     G PG+ G+PG+ G PG 
Sbjct: 601 DGDVGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPQGAVGETGKPGEQGVPGEAGAPGP 660

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G++G  G RG  G  G  G  G+P  
Sbjct: 661 AGARGDRGFPGERGAPGAIGPAGARGSPGA 690



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 83/194 (42%), Gaps = 54/194 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGA------------PGV 144
           PG +G  G+ G  G+KGE G KG               E G++GA            PG 
Sbjct: 415 PGPKGNTGEAGAPGSKGEAGAKGEAGAPGVQGPPGPPGEEGKRGARGEPGAAGARGGPGE 474

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            G PG +G PG +G  GPKG  G  G  G+       GPKG  G PGR    G  GLPG 
Sbjct: 475 RGAPGGRGFPGSDGPAGPKGATGERGAPGL------VGPKGATGEPGRT---GEPGLPGA 525

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKD------------------GIPGTNGTNGEKGMTGP 246
            G+ G PG  G DG  G  G PG+D                  G PG  G  GE G  G 
Sbjct: 526 KGMTGSPGNPGPDGKIGPSGAPGQDGRPGPPGPGGARGQPGVMGFPGPKGAAGEAGKPGE 585

Query: 247 RGNRGKSGINGVPG 260
           RG  G +G  G PG
Sbjct: 586 RGTMGPTGPAGAPG 599



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 82/214 (38%), Gaps = 72/214 (33%)

Query: 113 GLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL GP G    KGE GA+G +G  G RG  G  G  GPPGP G        GP G  G P
Sbjct: 758 GLPGPAGSPGDKGEPGAQGPVGPSGARGPPGERGEAGPPGPAGF------AGPPGADGQP 811

Query: 170 GPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR- 213
           G +G PGD G +G               P+G +G  G  G  G  G PG  G  G  GR 
Sbjct: 812 GAKGEPGDNGAKGDSGPPGPAGPTGAPGPQGPVGNTGPKGARGPAGPPGATGFPGAAGRV 871

Query: 214 -----------------------------NGMDGIPGK------------------DGLP 226
                                         G  G PG+                  DG P
Sbjct: 872 GPPGPAGNAGPPGPPGPAGKEGPKGNRGETGPAGRPGELGAAGPPGPPGEKGSPGADGAP 931

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  GIPG  G  G++G+ G  G RG+ G  G+ G
Sbjct: 932 GSAGIPGPQGIAGQRGIVGLPGQRGERGFPGLAG 965



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 84/230 (36%), Gaps = 87/230 (37%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGE------------------------KGAPGVVG 146
            P G  GP G  G+ GAKGE G  G +G+                        KGA G  G
Sbjct: 798  PAGFAGPPGADGQPGAKGEPGDNGAKGDSGPPGPAGPTGAPGPQGPVGNTGPKGARGPAG 857

Query: 147  PPGPQGIPGDEGK---------------------------RGPKGDMGYPG--------- 170
            PPG  G PG  G+                           RG  G  G PG         
Sbjct: 858  PPGATGFPGAAGRVGPPGPAGNAGPPGPPGPAGKEGPKGNRGETGPAGRPGELGAAGPPG 917

Query: 171  ---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---PGRNGMDG 218
                       G PG  G  GP+G  G  G +GL G+ G  G PGL G    PG+ G  G
Sbjct: 918  PPGEKGSPGADGAPGSAGIPGPQGIAGQRGIVGLPGQRGERGFPGLAGPVGEPGKQGPSG 977

Query: 219  ---------------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                           + G  G PG++G PG  G  G  G  GP+G+RG+S
Sbjct: 978  PSGERGPPGPMGPPGLAGAPGEPGREGTPGNEGAAGRDGAPGPKGDRGES 1027



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 84/233 (36%), Gaps = 87/233 (37%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G  G IG  G  G  G++GE GA G VGP G +G PG+ G+ GP G  G+ GP
Sbjct: 745 PGKDGPRGLTGPIGLPGPAGSPGDKGEPGAQGPVGPSGARGPPGERGEAGPPGPAGFAGP 804

Query: 172 ---------QGIPGD------------------------------EGKRGPKGDMGYPGR 192
                    +G PGD                              +G RGP G  G  G 
Sbjct: 805 PGADGQPGAKGEPGDNGAKGDSGPPGPAGPTGAPGPQGPVGNTGPKGARGPAGPPGATGF 864

Query: 193 IGLDGR------------------------DGLPGEPGLDGIPGRNGM------------ 216
            G  GR                         G  GE G  G PG  G             
Sbjct: 865 PGAAGRVGPPGPAGNAGPPGPPGPAGKEGPKGNRGETGPAGRPGELGAAGPPGPPGEKGS 924

Query: 217 ---DGIPGKDGLPGKDGI---------PGTNGTNGEKGMTGPRGNRGKSGING 257
              DG PG  G+PG  GI         PG  G  G  G+ GP G  GK G +G
Sbjct: 925 PGADGAPGSAGIPGPQGIAGQRGIVGLPGQRGERGFPGLAGPVGEPGKQGPSG 977



 Score = 46.2 bits (108), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 74/201 (36%), Gaps = 66/201 (32%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------- 157
           P G +GP G++GE G  G  G  G  G  G PG  G PG  G  GD              
Sbjct: 780 PSGARGPPGERGEAGPPGPAGFAGPPGADGQPGAKGEPGDNGAKGDSGPPGPAGPTGAPG 839

Query: 158 --------GKRGPKGDMGYPGPQGIPGDEGK---------------------------RG 182
                   G +G +G  G PG  G PG  G+                           RG
Sbjct: 840 PQGPVGNTGPKGARGPAGPPGATGFPGAAGRVGPPGPAGNAGPPGPPGPAGKEGPKGNRG 899

Query: 183 PKGDMGYPGRIG---------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G  G PG +G                DG  G  G PG  GI G+ G+ G+PG+    G
Sbjct: 900 ETGPAGRPGELGAAGPPGPPGEKGSPGADGAPGSAGIPGPQGIAGQRGIVGLPGQR---G 956

Query: 228 KDGIPGTNGTNGEKGMTGPRG 248
           + G PG  G  GE G  GP G
Sbjct: 957 ERGFPGLAGPVGEPGKQGPSG 977



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  GE G+ G PG  GPPGPQG              G+PG  G+PG +G RG  G  G  
Sbjct: 218 GEDGESGKPGRPGERGPPGPQGA------------RGFPGTPGLPGIKGHRGFSGLDGAK 265

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           G  G  G  G  G PG +G PG  G  G+PG+
Sbjct: 266 GDTGPAGPKGEAGTPGENGTPGAMGPRGLPGE 297



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 61/150 (40%), Gaps = 39/150 (26%)

Query: 142 PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG------------------DEGKRGP 183
           PG  GP GPQG  G  G +G  G+ G PG +G  G                  +EGKRG 
Sbjct: 400 PGPRGPSGPQGAAGAPGPKGNTGEAGAPGSKGEAGAKGEAGAPGVQGPPGPPGEEGKRGA 459

Query: 184 K------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +                  G  G+PG  G  G  G  GE G  G+ G  G  G PG+ G 
Sbjct: 460 RGEPGAAGARGGPGERGAPGGRGFPGSDGPAGPKGATGERGAPGLVGPKGATGEPGRTGE 519

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           P   G+PG  G  G  G  GP G  G SG 
Sbjct: 520 P---GLPGAKGMTGSPGNPGPDGKIGPSGA 546



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 60/127 (47%), Gaps = 15/127 (11%)

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL------------DGRDG 200
            PG  G  GP+G  G PGP+G  G+ G  G KG+ G  G  G             +G+ G
Sbjct: 399 FPGPRGPSGPQGAAGAPGPKGNTGEAGAPGSKGEAGAKGEAGAPGVQGPPGPPGEEGKRG 458

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGING 257
             GEPG  G  G  G  G PG  G PG DG  G  G  GE+   G+ GP+G  G+ G  G
Sbjct: 459 ARGEPGAAGARGGPGERGAPGGRGFPGSDGPAGPKGATGERGAPGLVGPKGATGEPGRTG 518

Query: 258 VPGTPAI 264
            PG P  
Sbjct: 519 EPGLPGA 525


>gi|354475157|ref|XP_003499796.1| PREDICTED: collagen alpha-3(V) chain-like [Cricetulus griseus]
          Length = 1741

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/182 (42%), Positives = 95/182 (52%), Gaps = 21/182 (11%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G         PPG  GP+G  G  G KG  G +G +GEKG  G  G PG     GDEG 
Sbjct: 688 EGPTGEKGAQGPPGSAGPLGYPGPRGVKGTSGNRGLQGEKGERGEDGFPG---FKGDEGP 744

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G +G+ G PGP+G  G EG++GP+G   D G PG  G  G+ G+PG PG  G PG  G 
Sbjct: 745 KGDRGNPGLPGPRGEDGPEGQKGPEGLAGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGS 804

Query: 217 DGIP------------GKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G P            GK G PG++   G+PGT G  G+ G TG  G +G  G NG PG 
Sbjct: 805 TGFPGPLGPLGEKGKRGKAGQPGEEGERGVPGTRGDRGQPGATGQPGPKGDVGQNGSPGA 864

Query: 262 PA 263
           P 
Sbjct: 865 PG 866



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 87/186 (46%), Gaps = 36/186 (19%)

Query: 112 PGLQGPIGQKGE------------------IGAKGEMGVKGERGEKGAPGVVGP---PGP 150
           PG QGPIG  GE                   G  G  G  GE+G +G PG  GP   PGP
Sbjct: 652 PGPQGPIGTPGEKGPPGNPGIPGVPGAEGPPGHPGHEGPTGEKGAQGPPGSAGPLGYPGP 711

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG---------L 201
           +G+ G  G RG +G+ G  G  G PG +G  GPKGD G PG  G  G DG         L
Sbjct: 712 RGVKGTSGNRGLQGEKGERGEDGFPGFKGDEGPKGDRGNPGLPGPRGEDGPEGQKGPEGL 771

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G+ G  G  G  G  G+PG  G PG+       G PG  G  GEKG  G  G  G+ G 
Sbjct: 772 AGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSTGFPGPLGPLGEKGKRGKAGQPGEEGE 831

Query: 256 NGVPGT 261
            GVPGT
Sbjct: 832 RGVPGT 837



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/142 (45%), Positives = 79/142 (55%), Gaps = 6/142 (4%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QGPIG  GE G+ GE G  G  G+ G PG+   PG QG PG  G  G +GD G     
Sbjct: 1028 GGQGPIGPAGEKGSPGERGAPGPTGKDGIPGL---PGLQGPPGAAGPSGEEGDKGE---V 1081

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+PG +G +G KGD G PG  G+ G  G PG PG DG  GR G  G+ G+ G  G  G  
Sbjct: 1082 GMPGHKGSKGDKGDSGPPGPTGIRGPAGHPGLPGADGAQGRRGPPGLFGQKGDDGVRGFV 1141

Query: 233  GTNGTNGEKGMTGPRGNRGKSG 254
            G  G  G +G+ GP G +G+ G
Sbjct: 1142 GVIGPPGLQGLPGPPGEKGEVG 1163



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 84/173 (48%), Gaps = 21/173 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK---------------GAPGVVGPPGPQGIPGD 156
            PG  GPIG KG+ G  G +G  G  GE+               G  G +GP G +G PG+
Sbjct: 985  PGDPGPIGLKGDKGPPGPVGANGSPGERGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGE 1044

Query: 157  EGKRGPKGDMGYP------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G  GP G  G P      GP G  G  G+ G KG++G PG  G  G  G  G PG  GI
Sbjct: 1045 RGAPGPTGKDGIPGLPGLQGPPGAAGPSGEEGDKGEVGMPGHKGSKGDKGDSGPPGPTGI 1104

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G+PG DG  G+ G PG  G  G+ G+ G  G  G  G+ G+PG P 
Sbjct: 1105 RGPAGHPGLPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPG 1157



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 87/170 (51%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G+ G  G KG  G+ G+ G  GA G  G  G  G+PG  G+ GPKG  G+PGP
Sbjct: 751 PGLPGPRGEDGPEGQKGPEGLAGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSTGFPGP 810

Query: 172 QGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G++GKR      G +G+ G PG  G  G+ G  G+PG  G  G+NG  G PG+ GL
Sbjct: 811 LGPLGEKGKRGKAGQPGEEGERGVPGTRGDRGQPGATGQPGPKGDVGQNGSPGAPGEKGL 870

Query: 226 ------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                              GKDGIPG  G  GE G  G  G  G +G+ G
Sbjct: 871 PGLQGPPGFPGPKGPPGPQGKDGIPGHPGQRGELGFQGQTGPPGPAGVLG 920



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/139 (43%), Positives = 75/139 (53%), Gaps = 6/139 (4%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            A G+ G  G +G+KG PG V   G  G PG+ G  GP G +G PG  G  G  G  G KG
Sbjct: 984  APGDPGPIGLKGDKGPPGPV---GANGSPGERGPVGPSGGIGLPGQSGGQGPIGPAGEKG 1040

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              G  G  G  G+DG+PG PGL G PG  G     G++G  G+ G+PG  G+ G+KG +G
Sbjct: 1041 SPGERGAPGPTGKDGIPGLPGLQGPPGAAGPS---GEEGDKGEVGMPGHKGSKGDKGDSG 1097

Query: 246  PRGNRGKSGINGVPGTPAI 264
            P G  G  G  G PG P  
Sbjct: 1098 PPGPTGIRGPAGHPGLPGA 1116



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/183 (42%), Positives = 100/183 (54%), Gaps = 12/183 (6%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGD 177
            +G+ GAKGE+G  G  G++G PG +G PGPQG PGD G  G KGD G PGP    G PG+
Sbjct: 952  EGKEGAKGELGPLGSPGKEGPPGPMGFPGPQGAPGDPGPIGLKGDKGPPGPVGANGSPGE 1011

Query: 178  EGKRGPKGDMGYPGR------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G  GP G +G PG+      IG  G  G PGE G  G  G++G+ G+PG  G PG  G 
Sbjct: 1012 RGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGERGAPGPTGKDGIPGLPGLQGPPGAAGP 1071

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ-LLIPPTIV 290
             G  G  GE GM G +G++G  G +G PG   I          LP ++ +Q    PP + 
Sbjct: 1072 SGEEGDKGEVGMPGHKGSKGDKGDSGPPGPTGIRGPAGHPG--LPGADGAQGRRGPPGLF 1129

Query: 291  GSE 293
            G +
Sbjct: 1130 GQK 1132



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 78/153 (50%), Gaps = 21/153 (13%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPPGPQG 152
           PPG  G  G+ G +G  G  G+KGE GE                  +G  G  G  G +G
Sbjct: 480 PPGPVGLTGRPGPVGLPGYPGLKGESGEVGPQGPRGLQGPPGPPGREGKTGRAGADGARG 539

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           +PGD G   PKGD G+ G  G+PG++G+RG  G +G PG  G DG  GL G PG  G  G
Sbjct: 540 LPGDTG---PKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGEKGLQGPPGPTGQAG 596

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G  G+ G  GLPG  G PG  G++G  G  G
Sbjct: 597 EPGPRGLIGPRGLPGPLGRPGVTGSDGAPGAKG 629



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 97/255 (38%), Gaps = 102/255 (40%)

Query: 112  PGLQGPIGQKG------EIGAKGEMGVKGERGEKGAPGVVGPPGPQ-------------- 151
            PG  GP+G+KG      + G +GE GV G RG++G PG  G PGP+              
Sbjct: 808  PGPLGPLGEKGKRGKAGQPGEEGERGVPGTRGDRGQPGATGQPGPKGDVGQNGSPGAPGE 867

Query: 152  -------------------------GIPGDEGKR---------GPKGDMGYPGPQGIPGD 177
                                     GIPG  G+R         GP G  G  GPQG  GD
Sbjct: 868  KGLPGLQGPPGFPGPKGPPGPQGKDGIPGHPGQRGELGFQGQTGPPGPAGVLGPQGKVGD 927

Query: 178  ------------------------EGKRGPKGDMGY------------------------ 189
                                    EGK G KG++G                         
Sbjct: 928  VGPLGERGPPGPPGPPGEQGLPGMEGKEGAKGELGPLGSPGKEGPPGPMGFPGPQGAPGD 987

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PG IGL G  G PG  G +G PG  G  G  G  GLPG+ G  G  G  GEKG  G RG 
Sbjct: 988  PGPIGLKGDKGPPGPVGANGSPGERGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGERGA 1047

Query: 250  RGKSGINGVPGTPAI 264
             G +G +G+PG P +
Sbjct: 1048 PGPTGKDGIPGLPGL 1062



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 82/193 (42%), Gaps = 57/193 (29%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------------------------E 157
            G  G +GE+G +G+ G  G  GV+GP   QG  GD                        E
Sbjct: 896  GHPGQRGELGFQGQTGPPGPAGVLGP---QGKVGDVGPLGERGPPGPPGPPGEQGLPGME 952

Query: 158  GKRGPKGDMGY------------------------PGPQGIPGDEGKRGPKGDMGYPGR- 192
            GK G KG++G                         PGP G+ GD+G  GP G  G PG  
Sbjct: 953  GKEGAKGELGPLGSPGKEGPPGPMGFPGPQGAPGDPGPIGLKGDKGPPGPVGANGSPGER 1012

Query: 193  --IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPR 247
              +G  G  GLPG+ G  G  G  G  G PG+ G P   GKDGIPG  G  G  G  GP 
Sbjct: 1013 GPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGERGAPGPTGKDGIPGLPGLQGPPGAAGPS 1072

Query: 248  GNRGKSGINGVPG 260
            G  G  G  G+PG
Sbjct: 1073 GEEGDKGEVGMPG 1085



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 83/203 (40%), Gaps = 60/203 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ+G+ G  G+ G  GE GEKG   + GPPGP G  G+ G RG  G  G PGP
Sbjct: 556 PGLPGEKGQRGDFGHVGQPGPPGEDGEKG---LQGPPGPTGQAGEPGPRGLIGPRGLPGP 612

Query: 172 ------------------------------------QGIPGDEG---------------- 179
                                               QGIPG +G                
Sbjct: 613 LGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQGPIGTPGEKGPPGNPGI 672

Query: 180 -----KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
                  GP G  G+ G  G  G  G PG  G  G PG  G+ G  G  GL G+ G  G 
Sbjct: 673 PGVPGAEGPPGHPGHEGPTGEKGAQGPPGSAGPLGYPGPRGVKGTSGNRGLQGEKGERGE 732

Query: 235 NGTNGEKGMTGPRGNRGKSGING 257
           +G  G KG  GP+G+RG  G+ G
Sbjct: 733 DGFPGFKGDEGPKGDRGNPGLPG 755



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/134 (41%), Positives = 64/134 (47%), Gaps = 27/134 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQGP          G  G  GE G+KG           G+PG +G +G KGD G PGP
Sbjct: 1060 PGLQGP---------PGAAGPSGEEGDKGE---------VGMPGHKGSKGDKGDSGPPGP 1101

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             GI         +G  G+PG  G DG  G  G PGL G  G +G+ G  G  G PG  G+
Sbjct: 1102 TGI---------RGPAGHPGLPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGL 1152

Query: 232  PGTNGTNGEKGMTG 245
            PG  G  GE G  G
Sbjct: 1153 PGPPGEKGEVGDVG 1166



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 89/222 (40%), Gaps = 72/222 (32%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGE---------------RGEKGAPGVVGP---PG--- 149
           P GL GP+G+ G  G+ G  G KG                 G +G PG  GP   PG   
Sbjct: 606 PRGLPGPLGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQGPIGTPGEKG 665

Query: 150 ------------PQGIPGDEGKRGPKGDM------------GYPGPQGI----------- 174
                        +G PG  G  GP G+             GYPGP+G+           
Sbjct: 666 PPGNPGIPGVPGAEGPPGHPGHEGPTGEKGAQGPPGSAGPLGYPGPRGVKGTSGNRGLQG 725

Query: 175 ----------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------PGRNGMDG 218
                     PG +G  GPKGD G PG  G  G DG  G+ G +G+      PG  G  G
Sbjct: 726 EKGERGEDGFPGFKGDEGPKGDRGNPGLPGPRGEDGPEGQKGPEGLAGDEGPPGAAGEKG 785

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  GLPG  G PG  G+ G  G  GP G +GK G  G PG
Sbjct: 786 KLGVPGLPGYPGRPGPKGSTGFPGPLGPLGEKGKRGKAGQPG 827



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 82/194 (42%), Gaps = 39/194 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  G KG+ G  G  G+ GE+G++G  G VG PGP G  G++G +GP G  G     
Sbjct: 539 GLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGEKGLQGPPGPTGQ---A 595

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------------------GLDGIPGRN 214
           G PG  G  GP+G  G  GR G+ G DG PG                    G  GIPG  
Sbjct: 596 GEPGPRGLIGPRGLPGPLGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQ 655

Query: 215 GMDGIPGKD------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G PG+                   G PG +G  G  G  G  G  GP G  G  G+ 
Sbjct: 656 GPIGTPGEKGPPGNPGIPGVPGAEGPPGHPGHEGPTGEKGAQGPPGSAGPLGYPGPRGVK 715

Query: 257 GVPGTPAICAYKRE 270
           G  G   +   K E
Sbjct: 716 GTSGNRGLQGEKGE 729



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 69/144 (47%), Gaps = 18/144 (12%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG---------------YPGPQGIPGDEGK 180
           +G  G  G+ G PGP G+PG  G +G  G++G                 G  G  G +G 
Sbjct: 478 KGPPGPVGLTGRPGPVGLPGYPGLKGESGEVGPQGPRGLQGPPGPPGREGKTGRAGADGA 537

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           RG  GD G  G  G DG  GLPGE G  G  G  G  G PG+DG  G  G PG  G  GE
Sbjct: 538 RGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGEKGLQGPPGPTGQAGE 597

Query: 241 ---KGMTGPRGNRGKSGINGVPGT 261
              +G+ GPRG  G  G  GV G+
Sbjct: 598 PGPRGLIGPRGLPGPLGRPGVTGS 621



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 83/211 (39%), Gaps = 54/211 (25%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVV 145
             S     P GL G +G  G+ G  G  G  GE+G+                  +G PG  
Sbjct: 1253 GSKGSMGPTGLPGDLGPPGDPGVAGVDGAPGEKGDAGDIGGPGPPGASGEPGARGLPGKR 1312

Query: 146  GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
            GPPG  G  G EG++G KGD G  GP G  G  G RGP      PGR+G DG  G+P   
Sbjct: 1313 GPPGRMGPEGREGEKGAKGDAGPDGPPGRTGPTGARGP------PGRLGPDGLPGIPGPV 1366

Query: 203  ---------------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                                       G+ GL G  G  G+ G+ G  G  G+ G  G  
Sbjct: 1367 GEPGLLGPPGLIGPPGPLGPPGLPGLKGDAGLKGEKGHIGLIGLVGPAGEAGEKGDQGLP 1426

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G  G  G  G  G  G +G  G PG P +  
Sbjct: 1427 GVQGPPGPQGDTGLPGPAGALGHPGPPGVVG 1457



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 69/162 (42%), Gaps = 51/162 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGPQGIP---------- 154
            PPG  GP G++GE GAKG+ G        G  G +G PG +GP G  GIP          
Sbjct: 1314 PPGRMGPEGREGEKGAKGDAGPDGPPGRTGPTGARGPPGRLGPDGLPGIPGPVGEPGLLG 1373

Query: 155  --------------------GDEGKR------------GPKGDMGYPGPQGIPGDEGKRG 182
                                GD G +            GP G+ G  G QG+PG +G  G
Sbjct: 1374 PPGLIGPPGPLGPPGLPGLKGDAGLKGEKGHIGLIGLVGPAGEAGEKGDQGLPGVQGPPG 1433

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P+GD G PG  G  G    PG PG+ G  G+ G  G PG  G
Sbjct: 1434 PQGDTGLPGPAGALGH---PGPPGVVGPLGQKGSKGSPGSPG 1472



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 62/123 (50%), Gaps = 24/123 (19%)

Query: 129  EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG------------PQGIPG 176
            E G KG  G  G PG +GPPG  G+ G +G  G KGD G  G             +G+PG
Sbjct: 1251 EDGSKGSMGPTGLPGDLGPPGDPGVAGVDGAPGEKGDAGDIGGPGPPGASGEPGARGLPG 1310

Query: 177  DEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
               KRGP      PGR+G +GR+   G  G+ G DG PGR G  G  G  G  G DG+PG
Sbjct: 1311 ---KRGP------PGRMGPEGREGEKGAKGDAGPDGPPGRTGPTGARGPPGRLGPDGLPG 1361

Query: 234  TNG 236
              G
Sbjct: 1362 IPG 1364


>gi|348541185|ref|XP_003458067.1| PREDICTED: collagen alpha-1(XI) chain-like [Oreochromis niloticus]
          Length = 1811

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 89/160 (55%), Gaps = 15/160 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QG IG  G  G KGE G++G +G KG  G  G PG   I GD G +G +G++G  G
Sbjct: 742 PNGPQGAIGYPGPRGVKGEQGIRGLKGHKGEKGEDGFPG---IKGDFGVKGERGEIGVSG 798

Query: 171 PQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           P+G   ++G  GPKG +G PG    IGL G  G  G PG+ G PGR G  G  G  G PG
Sbjct: 799 PRG---EDGPEGPKGRVGPPGEVGAIGLIGEKGKLGVPGVPGYPGRQGPKGSLGFPGFPG 855

Query: 228 KDGIPGTNGTN------GEKGMTGPRGNRGKSGINGVPGT 261
            +G  GT G +      G++G TGPRG RG  G  G PG 
Sbjct: 856 SNGEKGTRGPSGKPGPRGQRGPTGPRGQRGPRGATGKPGA 895



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 83/155 (53%), Gaps = 9/155 (5%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPK 163
           GL+G  G+KGE    G KG+ GVKGERGE G  G  G  GP+G       PG+ G  G  
Sbjct: 765 GLKGHKGEKGEDGFPGIKGDFGVKGERGEIGVSGPRGEDGPEGPKGRVGPPGEVGAIGLI 824

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G  G  G+PG  G++GPKG +G+PG  G +G  G  G  G  G  G+ G  G  G+ 
Sbjct: 825 GEKGKLGVPGVPGYPGRQGPKGSLGFPGFPGSNGEKGTRGPSGKPGPRGQRGPTGPRGQR 884

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G  G PG  GT+G  G  GP G RG  G  G 
Sbjct: 885 GPRGATGKPGAKGTSGSDGPHGPPGERGLPGPQGA 919



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 95/218 (43%), Gaps = 69/218 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKR-- 160
           PG QGP G  G +G  G+ G +G  G  GA G+ G PG +G         +PGD+G R  
Sbjct: 551 PGPQGPRGPHGLMGPPGKAGRRGRAGADGARGMPGEPGAKGDRGFDGLPGLPGDKGHRGD 610

Query: 161 -------------GPKGDMGYPGPQGIPGDEGKR------------------------GP 183
                        G +GD G  GP+G+PG+ G R                        GP
Sbjct: 611 SGPMGPPGGTGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIPGPPGVRGNDGPHGP 670

Query: 184 KGDM------------------GYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG +                  G P   G IG  G  G  G+PGL G+PG +G  G PGK
Sbjct: 671 KGSLGPQGEPGPPGQQGTPGTQGMPGPQGAIGPPGEKGPTGKPGLPGMPGADGPPGHPGK 730

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G PG  G  G NG  G  G  GPRG +G+ GI G+ G
Sbjct: 731 EGPPGTKGNQGPNGPQGAIGYPGPRGVKGEQGIRGLKG 768



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 78/158 (49%), Gaps = 15/158 (9%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP----- 150
           +  ++G      E   PG++G  G KGE G  G  G +GE G +G  G VGPPG      
Sbjct: 763 IRGLKGHKGEKGEDGFPGIKGDFGVKGERGEIGVSGPRGEDGPEGPKGRVGPPGEVGAIG 822

Query: 151 ----------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                      G+PG  G++GPKG +G+PG  G  G++G RGP G  G  G+ G  G  G
Sbjct: 823 LIGEKGKLGVPGVPGYPGRQGPKGSLGFPGFPGSNGEKGTRGPSGKPGPRGQRGPTGPRG 882

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
             G  G  G PG  G  G  G  G PG+ G+PG  G N
Sbjct: 883 QRGPRGATGKPGAKGTSGSDGPHGPPGERGLPGPQGAN 920



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +G  G  G  G PGP G PG  G    KG++G PGPQG  G  G  GP G  G  GR G 
Sbjct: 521 KGPPGPMGFTGRPGPLGSPGSPGL---KGELGDPGPQGPRGPHGLMGPPGKAGRRGRAGA 577

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDGIPGTNGTNGEKGMTGPRGN 249
           DG  G+PGEPG  G  G +G+ G+PG  G        G  G  G +G  G+ G  GPRG 
Sbjct: 578 DGARGMPGEPGAKGDRGFDGLPGLPGDKGHRGDSGPMGPPGGTGEDGERGDDGDVGPRGL 637

Query: 250 RGKSGINGV 258
            G+ G  G+
Sbjct: 638 PGEPGPRGL 646



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 148 PGPQGIPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
           PG QG+PG +G  GP G+          G PG  G PG  GK GP G  G  G  G  G 
Sbjct: 689 PGTQGMPGPQGAIGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPPGTKGNQGPNGPQGA 748

Query: 199 DGLPGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G PG  G+    GI G  G  G  G+DG PG  G  G  G  GE G++GPRG  G  G 
Sbjct: 749 IGYPGPRGVKGEQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEIGVSGPRGEDGPEGP 808

Query: 256 NGVPGTPA 263
            G  G P 
Sbjct: 809 KGRVGPPG 816



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 89/218 (40%), Gaps = 69/218 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRG------PK 163
           G  GP+G  G  G KGE+G  G +G +G  G++GPPG    +G  G +G RG       K
Sbjct: 531 GRPGPLGSPGSPGLKGELGDPGPQGPRGPHGLMGPPGKAGRRGRAGADGARGMPGEPGAK 590

Query: 164 GDMGYPGPQGIPGDEGKR------------------------GPKGDMGYPGRIGL---- 195
           GD G+ G  G+PGD+G R                        GP+G  G PG  GL    
Sbjct: 591 GDRGFDGLPGLPGDKGHRGDSGPMGPPGGTGEDGERGDDGDVGPRGLPGEPGPRGLLGPK 650

Query: 196 --------------DGRDGLPGE---------------PGLDGIPGRNGMDGIPGKDG-- 224
                         DG  G  G                PG  G+PG  G  G PG+ G  
Sbjct: 651 GPPGIPGPPGVRGNDGPHGPKGSLGPQGEPGPPGQQGTPGTQGMPGPQGAIGPPGEKGPT 710

Query: 225 -LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG  G+PG +G  G  G  GP G +G  G NG  G 
Sbjct: 711 GKPGLPGMPGADGPPGHPGKEGPPGTKGNQGPNGPQGA 748



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 59/120 (49%), Gaps = 18/120 (15%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            +G  G +GE G KG+ G  G PG  GP GPQG PG  G  G +G  G  G QG+PG  G+
Sbjct: 1361 RGAEGRQGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGLPGAAGE 1420

Query: 181  R------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            +                  G KG+ G+ G IGL G  G  GE G  G+PG  G  G  G+
Sbjct: 1421 KGPPGPLGPPGLPGLRGDPGAKGEKGHQGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGE 1480



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 74/200 (37%), Gaps = 60/200 (30%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G MG  G  G  G+PG  G  G  G PG +G RGP G MG PG  G  G  G  G +
Sbjct: 522 GPPGPMGFTGRPGPLGSPGSPGLKGELGDPGPQGPRGPHGLMGPPGKAGRRGRAGADGAR 581

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDG---------------IPGRNGMDGIPGKDGLPGKD 229
           G  G PG  G  G DGLPG PG  G                 G  G DG  G  GLPG+ 
Sbjct: 582 GMPGEPGAKGDRGFDGLPGLPGDKGHRGDSGPMGPPGGTGEDGERGDDGDVGPRGLPGEP 641

Query: 230 G---------------------------------------------IPGTNGTNGEKGMT 244
           G                                              PGT G  G +G  
Sbjct: 642 GPRGLLGPKGPPGIPGPPGVRGNDGPHGPKGSLGPQGEPGPPGQQGTPGTQGMPGPQGAI 701

Query: 245 GPRGNRGKSGINGVPGTPAI 264
           GP G +G +G  G+PG P  
Sbjct: 702 GPPGEKGPTGKPGLPGMPGA 721



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 46/88 (52%)

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           +GP G MG+ GR G  G  G PG  G  G PG  G  G  G  G PGK G  G  G +G 
Sbjct: 521 KGPPGPMGFTGRPGPLGSPGSPGLKGELGDPGPQGPRGPHGLMGPPGKAGRRGRAGADGA 580

Query: 241 KGMTGPRGNRGKSGINGVPGTPAICAYK 268
           +GM G  G +G  G +G+PG P    ++
Sbjct: 581 RGMPGEPGAKGDRGFDGLPGLPGDKGHR 608



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 74/160 (46%), Gaps = 33/160 (20%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIP---------GDEGKRGPKGDMGYPGPQGIP 175
            GAKGE G  GE GE G PG  G  GP G P         G EG++G KG  G PG  G P
Sbjct: 1323 GAKGERGEDGEAGEAGTPGPPGENGPPGPPGKRGPAGARGAEGRQGEKGTKGDPGAVGPP 1382

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--------------------- 214
               GK GP G  G PG+ G +G  GLPG  G  G+PG                       
Sbjct: 1383 ---GKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGLPGAAGEKGPPGPLGPPGLPGLRGDP 1439

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G  G  G  GL G  G PG  G  G++G+ GP+G+ G  G
Sbjct: 1440 GAKGEKGHQGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1479



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 54/120 (45%), Gaps = 24/120 (20%)

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDGI- 231
            G EG++G KG  G PG +G  G+ G  G  G  G PG  G+ G+P   G+ GLPG  G  
Sbjct: 1362 GAEGRQGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGLPGAAGEK 1421

Query: 232  -----------------PGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
                             PG  G  G +   G+ GP G +G+ G  G+PG       K E+
Sbjct: 1422 GPPGPLGPPGLPGLRGDPGAKGEKGHQGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGET 1481



 Score = 42.7 bits (99), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 21/107 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
            PG  GP G+ G +G +G+ G  G  G +G PG V   G QG+PG  G++           
Sbjct: 1376 PGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSV---GEQGLPGAAGEKGPPGPLGPPGL 1432

Query: 161  -------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                   G KG+ G+ G  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1433 PGLRGDPGAKGEKGHQGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1479



 Score = 39.7 bits (91), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 79/206 (38%), Gaps = 72/206 (34%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP---------- 169
            +KG  G KG +G  G  G +G  G+ GP G  G+PG++G    KG++G P          
Sbjct: 1081 EKGVPGEKGPIGPAGRDGVQGPVGLPGPAGTAGVPGEDGD---KGEVGEPGQKGAKGGKG 1137

Query: 170  -----------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                             GP G  GD G RG +G  G  G  G  G  G PG  GL G+PG
Sbjct: 1138 EHGPPGPPGPLGPVGQPGPAGADGDLGPRGQQGPFGAKGDEGTRGFPGAPGPIGLQGLPG 1197

Query: 213  RNGMDG---------------------------------------IPGKDGLPGKDGIPG 233
             +G  G                                         G+ G PG+ G PG
Sbjct: 1198 PSGEKGETGDVGPMGPPGPPGPRGPAGPSGADGPQGPPGGIGNPGPVGEKGEPGEAGPPG 1257

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGVP 259
              G  G+K   GPRG RG+ G  G P
Sbjct: 1258 IVGEPGKK---GPRGERGEKGEAGQP 1280


>gi|301760031|ref|XP_002915835.1| PREDICTED: collagen alpha-1(XXVII) chain-like [Ailuropoda
            melanoleuca]
          Length = 1854

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 87/176 (49%), Gaps = 18/176 (10%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP GQ G  G+KGE G KG++G+ GAPG  G  G QG+PG  
Sbjct: 1364 GVQGLRGDPGQQGLPGHPGPRGQPGPKGSKGEEGPKGKQGKAGAPGRRGIQGLQGLPGPR 1423

Query: 158  GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G +G  G PGP G P               GD G  GP G  G PG  GL G  G P
Sbjct: 1424 GVVGRQGPEGVPGPDGFPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1483

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G  G+PG+    G PGK G  G  G+PG+ G  G KG  G  G  G  G+ G+
Sbjct: 1484 GFKGESGLPGQV---GPPGKRGTAGGTGLPGSQGEPGSKGQPGDSGEMGFPGMAGL 1536



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 85/150 (56%), Gaps = 12/150 (8%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            G +GE G  G  G++G  G+ G PG QG+PG  G RG       PGP+G  G+EG +G +
Sbjct: 1349 GDRGEPGDPGYPGQEGVQGLRGDPGQQGLPGHPGPRG------QPGPKGSKGEEGPKGKQ 1402

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEK 241
            G  G PGR G+ G  GLPG     G+ GR G +G+PG DG PG+DG  G  G    +G+ 
Sbjct: 1403 GKAGAPGRRGIQGLQGLPGP---RGVVGRQGPEGVPGPDGFPGRDGQAGQQGEQGDDGDP 1459

Query: 242  GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  GP G RG  G+ G+PG      +K ES
Sbjct: 1460 GPMGPAGKRGNPGVAGLPGAQGPPGFKGES 1489



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG VGPPG         KRG  G  G 
Sbjct: 1459 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQVGPPG---------KRGTAGGTGL 1509

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ GL GI G  G  G+ GK+G+ G 
Sbjct: 1510 PGSQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGLKGIQGPRGPPGLMGKEGIIGP 1569

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1570 LGILGPSGRPGPKGDKGSRGDLG 1592



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/133 (50%), Positives = 76/133 (57%), Gaps = 6/133 (4%)

Query: 119 GQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G KG++G     G  G  G +G KG PG  G PG QG PG EG  G KG   YPG QG+P
Sbjct: 682 GVKGDVGLPGLSGNPGPLGRKGYKGYPGPAGHPGEQGQPGPEGSPGAKG---YPGRQGLP 738

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G PG  G  G+ G PG +
Sbjct: 739 GPVGDPGPKGSRGYIGLPGLFGFPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPPGLD 798

Query: 236 GTNGEKGMTGPRG 248
           G  GE G+ GPRG
Sbjct: 799 GNPGELGLPGPRG 811



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 92/168 (54%), Gaps = 15/168 (8%)

Query: 112 PGLQG---PIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PGL G   P+G+KG  G  G  G  GE+G+   +G+PG  G PG QG+PG  G  GPKG 
Sbjct: 690 PGLSGNPGPLGRKGYKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGS 749

Query: 166 MGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            GY   PG  G PG +G+R   G  G PG+ G  GR G PG+ G  G P   G+DG PG+
Sbjct: 750 RGYIGLPGLFGFPGSDGER---GLPGVPGKRGKMGRPGFPGDFGERGPP---GLDGNPGE 803

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            GLPG  G+PG  G  G  G  G  G +G  G+ G  G P +   K E
Sbjct: 804 LGLPGPRGVPGLIGDMGALGPIGYPGPKGVKGLMGNMGEPGLKGDKGE 851



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 92/193 (47%), Gaps = 33/193 (17%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------ 151
             + G         P G  GP G KG +G  GE G+KG++GE+G PGV G  G Q      
Sbjct: 811  GVPGLIGDMGALGPIGYPGPKGVKGLMGNMGEPGLKGDKGEQGVPGVSGDTGFQGDKGSQ 870

Query: 152  ---GIPGDEGKRGPKG---------------------DMGYP---GPQGIPGDEGKRGPK 184
               G PG  GK GP G                     D+G P   GP+G+ G  G RG  
Sbjct: 871  GLPGFPGARGKPGPLGKVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLP 930

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  G  G +G  G PG PGL+G PGR G  G PG DG+ G+ G PG  G  GE+G+ 
Sbjct: 931  GPRGQLGPEGDEGHMGPPGAPGLEGQPGRKGFPGRPGPDGMKGEPGDPGRPGPVGEQGLL 990

Query: 245  GPRGNRGKSGING 257
            G  G  G+ GI G
Sbjct: 991  GFIGLVGEPGIVG 1003



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 77/145 (53%), Gaps = 12/145 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G      + G +G+ G PG+ G PGP G          KG  GYPGP G PG++
Sbjct: 667 GQKGDPGLSPGKALDGVKGDVGLPGLSGNPGPLGR---------KGYKGYPGPAGHPGEQ 717

Query: 179 GKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+ GP+G     GYPGR GL G  G PG  G  G  G  G+ G PG DG  G  G+PG  
Sbjct: 718 GQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGFPGSDGERGLPGVPGKR 777

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  G RG  G++G PG
Sbjct: 778 GKMGRPGFPGDFGERGPPGLDGNPG 802



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 81/157 (51%), Gaps = 15/157 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GP+G  G  G++G +G+ G         ERG  G PG  G  G  G PGD G+RGP 
Sbjct: 736 GLPGPVGDPGPKGSRGYIGLPGLFGFPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPP 795

Query: 164 G------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G      ++G PGP+G+PG  G  G  G +GYPG  G+ G  G  GEPGL G  G  G+ 
Sbjct: 796 GLDGNPGELGLPGPRGVPGLIGDMGALGPIGYPGPKGVKGLMGNMGEPGLKGDKGEQGVP 855

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G+ G  G  G  G  G  G  G +G  GP G  G  G
Sbjct: 856 GVSGDTGFQGDKGSQGLPGFPGARGKPGPLGKVGDKG 892



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 91/200 (45%), Gaps = 33/200 (16%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           I L  + GF  S  E   PG+ G  G+ G  G  G+ G +G  G  G PG +G PGP+G+
Sbjct: 753 IGLPGLFGFPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGELGLPGPRGV 812

Query: 154 PGDEGKRGPKGDMGYPGPQGIPG------DEGKRGPKGDMGYPGRIGL------DGRDGL 201
           PG  G  G  G +GYPGP+G+ G      + G +G KG+ G PG  G        G  GL
Sbjct: 813 PGLIGDMGALGPIGYPGPKGVKGLMGNMGEPGLKGDKGEQGVPGVSGDTGFQGDKGSQGL 872

Query: 202 PGEPGLDGIPGRNGMD---------------------GIPGKDGLPGKDGIPGTNGTNGE 240
           PG PG  G PG  G                       G PG +G  G  G PG  G  G 
Sbjct: 873 PGFPGARGKPGPLGKVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGP 932

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           +G  GP G+ G  G  G PG
Sbjct: 933 RGQLGPEGDEGHMGPPGAPG 952



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 86/193 (44%), Gaps = 36/193 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G +G  G IG  G  GVKG  G  G PG+ G  G QG+PG  G  G +GD G  G 
Sbjct: 813  PGLIGDMGALGPIGYPGPKGVKGLMGNMGEPGLKGDKGEQGVPGVSGDTGFQGDKGSQGL 872

Query: 172  QGIPGDEGKRGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLD-- 208
             G PG  GK GP G                     D+G PG  G +G  G PG  GL   
Sbjct: 873  PGFPGARGKPGPLGKVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGP 932

Query: 209  -------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                         G PG  G++G PG+ G PG+ G  G  G  G+ G  GP G +G  G 
Sbjct: 933  RGQLGPEGDEGHMGPPGAPGLEGQPGRKGFPGRPGPDGMKGEPGDPGRPGPVGEQGLLGF 992

Query: 256  NGVPGTPAICAYK 268
             G+ G P I   K
Sbjct: 993  IGLVGEPGIVGEK 1005



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 88/189 (46%), Gaps = 42/189 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG  GP G KG+ GA+G  G +G+ G +G  G +GPPG    PG EG+ G KG  G PG
Sbjct: 911  PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGHMGPPG---APGLEGQPGRKGFPGRPG 967

Query: 171  PQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------------GIPG 212
            P G+   PGD G+ GP G+ G  G IGL G  G+ GE G                 G PG
Sbjct: 968  PDGMKGEPGDPGRPGPVGEQGLLGFIGLVGEPGIVGEKGDRGMMGPPGAPGPKGSMGHPG 1027

Query: 213  RNG---------------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              G                     M G  G+ G  G DG  G  G+ G KG +GP+G  G
Sbjct: 1028 TPGAVGTPGEPGPPGPPGSRGPPGMRGAKGRWGPRGPDGPAGEQGSRGLKGPSGPQGRVG 1087

Query: 252  KSGINGVPG 260
            + G  G  G
Sbjct: 1088 QPGQQGAAG 1096



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 83/193 (43%), Gaps = 57/193 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---------------------------------- 138
            GL+GP G +G +G  G+ G  GERG                                   
Sbjct: 1075 GLKGPSGPQGRVGQPGQQGAAGERGHSGVRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPL 1134

Query: 139  --------KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                    KG PG VG P   G+PG+ G +G  G +G PG QG+ G  G+ G +GD G  
Sbjct: 1135 GPPGEMGPKGPPGAVGEP---GLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGP- 1190

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---------GLPGKDGIPGTNGTNGEK 241
               G DG  G  G+PG DG  G  G +G+ G+D         G+ G +G PG  G  G  
Sbjct: 1191 --AGPDGLKGDRGDPGPDGERGDKGQEGLMGEDGPPGPPGITGVRGPEGKPGKQGEKGRT 1248

Query: 242  GMTGPRGNRGKSG 254
            G  G +G +G+ G
Sbjct: 1249 GAKGAKGYQGQLG 1261



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 81/186 (43%), Gaps = 36/186 (19%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             M+G   +     P G  GP G +G +G  G  G++G+ G KG PG  GP G +G PGD 
Sbjct: 919  GMKGKPGARGLPGPRGQLGPEGDEGHMGPPGAPGLEGQPGRKGFPGRPGPDGMKGEPGDP 978

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIG-------- 194
            G+ GP G+ G  G  G+ G+ G  G KGD               MG+PG  G        
Sbjct: 979  GRPGPVGEQGLLGFIGLVGEPGIVGEKGDRGMMGPPGAPGPKGSMGHPGTPGAVGTPGEP 1038

Query: 195  -------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                         + G  G  G  G DG  G  G  G+ G  G  G+ G PG  G  GE+
Sbjct: 1039 GPPGPPGSRGPPGMRGAKGRWGPRGPDGPAGEQGSRGLKGPSGPQGRVGQPGQQGAAGER 1098

Query: 242  GMTGPR 247
            G +G R
Sbjct: 1099 GHSGVR 1104



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 94/240 (39%), Gaps = 85/240 (35%)

Query: 100  QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------- 147
            QG      E   PGL+G   P G  G  G +G+ G  GERG+KG  G++G          
Sbjct: 1173 QGLIGQRGE---PGLEGDSGPAGPDGLKGDRGDPGPDGERGDKGQEGLMGEDGPPGPPGI 1229

Query: 148  ---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGD---------------EGKRGPKGDMGY 189
                GP+G PG +G++G  G  G  G QG  G+               +G RG  G  G 
Sbjct: 1230 TGVRGPEGKPGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGA 1289

Query: 190  PGRIGLDGRDGLP----------------------------------------------- 202
            PGR+G  G  GL                                                
Sbjct: 1290 PGRMGAQGEPGLAGYDGHKGIMGPLGPPGPKGEKGEQGDDGKAEGPPGPPGDRGPIGDRG 1349

Query: 203  --GEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GEPG  G PG+ G+ G+   PG+ GLPG  G  G  G  G KG  GP+G +GK+G  G
Sbjct: 1350 DRGEPGDPGYPGQEGVQGLRGDPGQQGLPGHPGPRGQPGPKGSKGEEGPKGKQGKAGAPG 1409



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 56/100 (56%), Gaps = 12/100 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G  G  G++GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 1494 QVGPPGKRGTAGGTGLPGSQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGLKGIQG 1553

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
             RGP G MG     GP GI G  G+ GPKGD G  G +GL
Sbjct: 1554 PRGPPGLMGKEGIIGPLGILGPSGRPGPKGDKGSRGDLGL 1593



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 82/178 (46%), Gaps = 36/178 (20%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDMGYPGP 171
            +G KG  GA GE G+ GE G KG  G      P G PG++      G+ G +GD G  GP
Sbjct: 1140 MGPKGPPGAVGEPGLPGEAGMKGDLG------PLGTPGEQGLIGQRGEPGLEGDSGPAGP 1193

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+ GD G  GP G+ G  G+ GL G DG PG PG+ G+    G +G PGK G  G+ G 
Sbjct: 1194 DGLKGDRGDPGPDGERGDKGQEGLMGEDGPPGPPGITGV---RGPEGKPGKQGEKGRTGA 1250

Query: 232  PGTNGTNGE---------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G  G+                     +G  GP G  G+ G  G PG      +K
Sbjct: 1251 KGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHK 1308



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 92/240 (38%), Gaps = 94/240 (39%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGP 162
            PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+      PG +G+RG 
Sbjct: 1152 PGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDGERGD 1211

Query: 163  KGD---------------MGYPGPQGIPGDEGKR---GPKGDMGYPGRI----------- 193
            KG                 G  GP+G PG +G++   G KG  GY G++           
Sbjct: 1212 KGQEGLMGEDGPPGPPGITGVRGPEGKPGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGP 1271

Query: 194  ----------------GLDGRDGLPGEPGLDGIPGRNGM--------------------- 216
                            G  GR G  GEPGL G  G  G+                     
Sbjct: 1272 PGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGIMGPLGPPGPKGEKGEQGDDGK 1331

Query: 217  -------------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                                G PG  G PG++G+ G  G  G++G+ G  G RG+ G  G
Sbjct: 1332 AEGPPGPPGDRGPIGDRGDRGEPGDPGYPGQEGVQGLRGDPGQQGLPGHPGPRGQPGPKG 1391



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 88/240 (36%), Gaps = 93/240 (38%)

Query: 112  PGLQGPIGQKGE---IGAKGEMGVKGERGE------------------KGAPGVV----- 145
            PG  GP+G++G    IG  GE G+ GE+G+                   G PG V     
Sbjct: 978  PGRPGPVGEQGLLGFIGLVGEPGIVGEKGDRGMMGPPGAPGPKGSMGHPGTPGAVGTPGE 1037

Query: 146  ----------------------GPPGPQGIPGDEGKR------GPKGDMGYPGPQGIPGD 177
                                  GP GP G  G++G R      GP+G +G PG QG  G+
Sbjct: 1038 PGPPGPPGSRGPPGMRGAKGRWGPRGPDGPAGEQGSRGLKGPSGPQGRVGQPGQQGAAGE 1097

Query: 178  EGKR---------------------------------------GPKGDMGYPGRIGLDGR 198
             G                                         GPKG  G  G  GL G 
Sbjct: 1098 RGHSGVRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPLGPPGEMGPKGPPGAVGEPGLPGE 1157

Query: 199  DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G+ G+ G  G PG  G+ G  G+ GL G  G  G +G  G++G  GP G RG  G  G+
Sbjct: 1158 AGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDGERGDKGQEGL 1217


>gi|440912109|gb|ELR61708.1| Collagen alpha-1(XXIV) chain, partial [Bos grunniens mutus]
          Length = 1667

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 89/183 (48%), Gaps = 27/183 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQGP G  G+ G  GE G +G +G+ G PG +G  GP G  G+ G +G  G  G  GP
Sbjct: 927  PGLQGPPGSTGDRGLTGEPGPRGPQGDAGPPGEMGAEGPPGTEGESGLQGEPGTKGDVGP 986

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG---------------- 215
             G  G  G+ G +G+ G PG  GL G+DGL G PG  G+PG +G                
Sbjct: 987  VGSVGAAGEPGLRGEPGAPGEEGLQGKDGLKGNPGGRGLPGEDGEKGETGLPGTTGPLGG 1046

Query: 216  -----------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                       + GIPG+ G PGK G  G  G  GE G  G  G  G+SG+ G  GT   
Sbjct: 1047 PGLMGPPGPEGITGIPGQRGRPGKKGDKGQMGPAGEIGSRGAPGQFGESGLKGARGTRGA 1106

Query: 265  CAY 267
              +
Sbjct: 1107 VGH 1109



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 99/194 (51%), Gaps = 40/194 (20%)

Query: 112  PGLQGPIGQKGEIGAKGE----------------MGVKGERGEKGAPGV---VGPPGPQG 152
            PGL G  G KGE G  GE                MG +GERGE GA G    VG PGP+G
Sbjct: 1131 PGLSGLPGPKGEKGYPGEDNTILGPPGPRGEPGPMGEQGERGEPGAEGYKGHVGIPGPRG 1190

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                 G++GP G+ G  G QG+ G+ G  GPKG  G PG  G  G  GLPG PG  G+ G
Sbjct: 1191 A---TGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGAPGPSGKPGIPGLPGLPGPKGMQG 1247

Query: 213  RNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNR------------GKSG 254
             +G +GI   PGK GLPGK G+PG  G+ G  G+T   GP+G +            G  G
Sbjct: 1248 YHGAEGISGNPGKIGLPGKHGLPGIRGSPGRTGLTGSLGPQGAKGSSGPPGSPGVQGPKG 1307

Query: 255  INGVPGTPAICAYK 268
              G+PG P I   +
Sbjct: 1308 EQGLPGQPGIPGKR 1321



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 87/154 (56%), Gaps = 24/154 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGP---QG 152
            P G  GP+G++G  G KGE G +G               ERG +G PG+ GPPG    +G
Sbjct: 881  PRGPDGPLGEQGIQGTKGETGDQGKRGPHGLIGKTGNPGERGVQGKPGLQGPPGSTGDRG 940

Query: 153  IPGDEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            + G+ G RGP+GD G PG    +G PG EG+ G +G+ G  G +G  G  G  GEPGL G
Sbjct: 941  LTGEPGPRGPQGDAGPPGEMGAEGPPGTEGESGLQGEPGTKGDVGPVGSVGAAGEPGLRG 1000

Query: 210  IPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGE 240
             PG  G +G+ GKDGL   PG  G+PG +G  GE
Sbjct: 1001 EPGAPGEEGLQGKDGLKGNPGGRGLPGEDGEKGE 1034



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 91/184 (49%), Gaps = 33/184 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------VVGP---PGPQGI- 153
           GL GP G +G  G KG  G+ G +GE+G PG               + GP   PGP+G+ 
Sbjct: 513 GLMGPPGMQGVKGLKGHPGLPGLQGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVR 572

Query: 154 -----PGDEGKRGPKGDMGYPG---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                PG+ G+ GP+G+ G PG          QG PGD G RGP G  G PG IG  G  
Sbjct: 573 GFIGSPGEVGQLGPEGERGVPGIRGKRGLKGRQGFPGDFGDRGPAGPDGSPGLIGSTGPL 632

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G PG  G  G  G  G  GIPG  GL G  G+PG  G  GE+G+ G +G  G +G  G  
Sbjct: 633 GFPGLRGSVGPVGPIGPSGIPGPMGLSGNKGLPGIKGDKGEQGIAGEQGETGYTGDKGAV 692

Query: 260 GTPA 263
           G P 
Sbjct: 693 GFPG 696



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/181 (41%), Positives = 90/181 (49%), Gaps = 42/181 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +G+ G RG   ++G PG  G  G QG+ G+ G  GPKG  G PGP
Sbjct: 1168 QGERGEPGAEGYKGHVGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGAPGP 1227

Query: 172  Q---GIPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGM--- 216
                GIPG  G  GPKG  GY         PG+IGL G+ GL   PG+ G PGR G+   
Sbjct: 1228 SGKPGIPGLPGLPGPKGMQGYHGAEGISGNPGKIGLPGKHGL---PGIRGSPGRTGLTGS 1284

Query: 217  ------------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                               G  G+ GLPG+ GIPG  G  G +G  GP    G+SGI G 
Sbjct: 1285 LGPQGAKGSSGPPGSPGVQGPKGEQGLPGQPGIPGKRGHQGAQGDQGP---CGESGIKGQ 1341

Query: 259  P 259
            P
Sbjct: 1342 P 1342



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G   +  + GE+G++G  G++GPPG QG+      +G KG  G PG 
Sbjct: 482 PGLPGPKGPKGDPGFSPDQALSGEKGDQGLSGLMGPPGMQGV------KGLKGHPGLPGL 535

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QG  G  G  G  G  GYPGR GL G DG PG  G+ G  G  G  G  G +G  G  GI
Sbjct: 536 QGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVRGFIGSPGEVGQLGPEGERGVPGI 595

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G +G  G  G+RG +G +G PG
Sbjct: 596 RGKRGLKGRQGFPGDFGDRGPAGPDGSPG 624



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 18/175 (10%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G++GE GA+G  G  G  G +GA G  GPPG    PGD+G++G KG+ G  GP+G    +
Sbjct: 1169 GERGEPGAEGYKGHVGIPGPRGATGQQGPPGE---PGDQGEQGLKGERGSEGPKG---KK 1222

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GP G  G PG  GL G  G+ G  G +GI G  G  G+PGK GLPG  G PG  G  
Sbjct: 1223 GAPGPSGKPGIPGLPGLPGPKGMQGYHGAEGISGNPGKIGLPGKHGLPGIRGSPGRTGLT 1282

Query: 239  GEKGMTGPR------------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
            G  G  G +            G +G+ G+ G PG P    ++       P  E+ 
Sbjct: 1283 GSLGPQGAKGSSGPPGSPGVQGPKGEQGLPGQPGIPGKRGHQGAQGDQGPCGESG 1337



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 81/170 (47%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG---Y 168
           PG++G  G KG  G  G+ G +G  G  G+PG++G  GP G PG  G  GP G +G    
Sbjct: 593 PGIRGKRGLKGRQGFPGDFGDRGPAGPDGSPGLIGSTGPLGFPGLRGSVGPVGPIGPSGI 652

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGP G+ G++G  G KGD G  G  G  G  G  G+ G  G PG  GM G PG  G  G 
Sbjct: 653 PGPMGLSGNKGLPGIKGDKGEQGIAGEQGETGYTGDKGAVGFPGPPGMRGKPGPSGQTGD 712

Query: 229 D------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                              GIPG NG  G KG  G RG  G  G+ G  G
Sbjct: 713 PGPQGPSGPPGPEGFPGDIGIPGQNGPEGSKGFIGNRGPSGPPGLKGTQG 762



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 93/192 (48%), Gaps = 30/192 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G KG++G  G  G  G PG+ G PG    PG+EG +G  G  G PG
Sbjct: 965  PPGTEGESGLQGEPGTKGDVGPVGSVGAAGEPGLRGEPG---APGEEGLQGKDGLKGNPG 1021

Query: 171  PQGIPGDEGKRGPK---------------------------GDMGYPGRIGLDGRDGLPG 203
             +G+PG++G++G                             G  G PG+ G  G+ G  G
Sbjct: 1022 GRGLPGEDGEKGETGLPGTTGPLGGPGLMGPPGPEGITGIPGQRGRPGKKGDKGQMGPAG 1081

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            E G  G PG+ G  G+ G  G  G  G  G  G  G+ G+ G RG+ G+ G++G+PG   
Sbjct: 1082 EIGSRGAPGQFGESGLKGARGTRGAVGHLGLMGPAGKPGILGYRGHEGQPGLSGLPGPKG 1141

Query: 264  ICAYKRESCSLL 275
               Y  E  ++L
Sbjct: 1142 EKGYPGEDNTIL 1153



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/134 (44%), Positives = 72/134 (53%), Gaps = 6/134 (4%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           +G  G+ G  G  G PG+ GP GP+G PG   D+   G KGD G  G  G PG +G +G 
Sbjct: 467 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPDQALSGEKGDQGLSGLMGPPGMQGVKGL 526

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           K   G+PG  GL G  G+PG  G  G  G  G  G+ G DG PG  G+ G  G+ GE G 
Sbjct: 527 K---GHPGLPGLQGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVRGFIGSPGEVGQ 583

Query: 244 TGPRGNRGKSGING 257
            GP G RG  GI G
Sbjct: 584 LGPEGERGVPGIRG 597



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 101/215 (46%), Gaps = 57/215 (26%)

Query: 95  PLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------------VKGERGEKGAP 142
           P V  +G+     E  P GL+G +G +G IG  GE G              GE+GE+G+P
Sbjct: 775 PRVGPKGYAG---EPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGVTGSIGEKGERGSP 831

Query: 143 GVVGPPGPQG------------------IPGD------------EGKRGPKGDMGYPGPQ 172
           G VGP G +G                  +PG             +G+RGP+G  G  G Q
Sbjct: 832 GPVGPQGEKGAMGYPGPPGVPGPMGALGLPGHVGARGPPGIPGPKGRRGPRGPDGPLGEQ 891

Query: 173 GIP------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GI       GD+GKRGP G +   G+ G  G  G+ G+PGL G PG  G  G+ G+   P
Sbjct: 892 GIQGTKGETGDQGKRGPHGLI---GKTGNPGERGVQGKPGLQGPPGSTGDRGLTGE---P 945

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G  G  GE G  GP G  G+SG+ G PGT
Sbjct: 946 GPRGPQGDAGPPGEMGAEGPPGTEGESGLQGEPGT 980



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 97/233 (41%), Gaps = 69/233 (29%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGA------------ 141
            V  QG      E  P GL G +G  G IG KGE G  G    +GEKGA            
Sbjct: 795  VGDQGNIGKIGETGPVGLPGEVGVTGSIGEKGERGSPGPVGPQGEKGAMGYPGPPGVPGP 854

Query: 142  ------PGVVG---------------------PPGPQGIP------GDEGKRGP------ 162
                  PG VG                     P G QGI       GD+GKRGP      
Sbjct: 855  MGALGLPGHVGARGPPGIPGPKGRRGPRGPDGPLGEQGIQGTKGETGDQGKRGPHGLIGK 914

Query: 163  ------KGDMGYPGPQGIP---------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                  +G  G PG QG P         G+ G RGP+GD G PG +G +G  G  GE GL
Sbjct: 915  TGNPGERGVQGKPGLQGPPGSTGDRGLTGEPGPRGPQGDAGPPGEMGAEGPPGTEGESGL 974

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG  G  G  G  G  G+ G+ G  G  GE+G+ G  G +G  G  G+PG
Sbjct: 975  QGEPGTKGDVGPVGSVGAAGEPGLRGEPGAPGEEGLQGKDGLKGNPGGRGLPG 1027



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 83/177 (46%), Gaps = 34/177 (19%)

Query: 119  GQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GQ+G  G    KG+MG  GE G +GAPG     G  G+ G  G RG  G +G  GP G P
Sbjct: 1063 GQRGRPGKKGDKGQMGPAGEIGSRGAPGQF---GESGLKGARGTRGAVGHLGLMGPAGKP 1119

Query: 176  GDEGKR------------GPKGDMGYPGR-------------IGLDGRDGLPGEPGLDGI 210
            G  G R            GPKG+ GYPG               G  G  G  GEPG +G 
Sbjct: 1120 GILGYRGHEGQPGLSGLPGPKGEKGYPGEDNTILGPPGPRGEPGPMGEQGERGEPGAEGY 1179

Query: 211  PGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G+    G  G+ G PG+ G  G  G  GE+G  GP+G +G  G +G PG P +
Sbjct: 1180 KGHVGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGAPGPSGKPGIPGL 1236



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 90/197 (45%), Gaps = 39/197 (19%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------V 144
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG            +
Sbjct: 1183 VGIPGPRGATGQQGPPGEPG---DQGEQGLKGERGSEGPKGKKGAPGPSGKPGIPGLPGL 1239

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL--------- 195
             GP G QG  G EG  G  G +G PG  G+PG  G  G  G  G  G  G          
Sbjct: 1240 PGPKGMQGYHGAEGISGNPGKIGLPGKHGLPGIRGSPGRTGLTGSLGPQGAKGSSGPPGS 1299

Query: 196  ------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT------NGTNGEKGM 243
                   G  GLPG+P   GIPG+ G  G  G  G  G+ GI G        G  G +G 
Sbjct: 1300 PGVQGPKGEQGLPGQP---GIPGKRGHQGAQGDQGPCGESGIKGQPVEHGIQGLMGFQGF 1356

Query: 244  TGPRGNRGKSGINGVPG 260
             GP+G +G +GI G+ G
Sbjct: 1357 PGPKGPQGDAGIVGISG 1373



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 91/197 (46%), Gaps = 25/197 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQG 152
           L   QGF     +  P    GP G  G IG+ G +G  G RG  G  G +GP   PGP G
Sbjct: 601 LKGRQGFPGDFGDRGP---AGPDGSPGLIGSTGPLGFPGLRGSVGPVGPIGPSGIPGPMG 657

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---- 208
           + G++G  G KGD G  G  G  G+ G  G KG +G+PG  G+ G+ G  G+ G      
Sbjct: 658 LSGNKGLPGIKGDKGEQGIAGEQGETGYTGDKGAVGFPGPPGMRGKPGPSGQTGDPGPQG 717

Query: 209 --------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG-KS 253
                         GIPG+NG +G  G  G  G  G PG  GT GE+G TG  G  G + 
Sbjct: 718 PSGPPGPEGFPGDIGIPGQNGPEGSKGFIGNRGPSGPPGLKGTQGEEGPTGSFGELGPRV 777

Query: 254 GINGVPGTPAICAYKRE 270
           G  G  G P     K E
Sbjct: 778 GPKGYAGEPGPEGLKGE 794



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 92/207 (44%), Gaps = 49/207 (23%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG----------------VKGERGEKGAPG 143
           +GF  +     PPGL+G  G++G  G+ GE+G                +KGE G++G  G
Sbjct: 743 KGFIGNRGPSGPPGLKGTQGEEGPTGSFGELGPRVGPKGYAGEPGPEGLKGEVGDQGNIG 802

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---------------G 188
            +G  GP G+PG+ G     G +G  G +G PG  G +G KG M               G
Sbjct: 803 KIGETGPVGLPGEVGV---TGSIGEKGERGSPGPVGPQGEKGAMGYPGPPGVPGPMGALG 859

Query: 189 YPGRIGL---------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            PG +G                 G DG  GE G+ G  G  G  G  G  GL GK G PG
Sbjct: 860 LPGHVGARGPPGIPGPKGRRGPRGPDGPLGEQGIQGTKGETGDQGKRGPHGLIGKTGNPG 919

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+ G+ GP G+ G  G+ G PG
Sbjct: 920 ERGVQGKPGLQGPPGSTGDRGLTGEPG 946



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 97/237 (40%), Gaps = 58/237 (24%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------- 143
            G   S      PGL+G  G  GE G +G+ G+KG  G +G PG                 
Sbjct: 985  GPVGSVGAAGEPGLRGEPGAPGEEGLQGKDGLKGNPGGRGLPGEDGEKGETGLPGTTGPL 1044

Query: 144  -------------VVGPPGPQGIP---GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
                         + G PG +G P   GD+G+ GP G++G  G  G  G+ G +G +G  
Sbjct: 1045 GGPGLMGPPGPEGITGIPGQRGRPGKKGDKGQMGPAGEIGSRGAPGQFGESGLKGARGTR 1104

Query: 188  GYPGRIGLDGRDGLP---------GEPGLDGIPGRNGMDGIPGKDGL------------- 225
            G  G +GL G  G P         G+PGL G+PG  G  G PG+D               
Sbjct: 1105 GAVGHLGLMGPAGKPGILGYRGHEGQPGLSGLPGPKGEKGYPGEDNTILGPPGPRGEPGP 1164

Query: 226  ---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
                G+ G PG  G  G  G+ GPRG  G+ G  G PG       K E  S  P  +
Sbjct: 1165 MGEQGERGEPGAEGYKGHVGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGK 1221



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 84/179 (46%), Gaps = 37/179 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGPPGPQG-------------- 152
           GL G  G KGE G  GE G  G  G+KGA      PG+ G PGP G              
Sbjct: 663 GLPGIKGDKGEQGIAGEQGETGYTGDKGAVGFPGPPGMRGKPGPSGQTGDPGPQGPSGPP 722

Query: 153 ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD-GRDGL 201
                     IPG  G  G KG +G  GP G PG +G +G +G  G  G +G   G  G 
Sbjct: 723 GPEGFPGDIGIPGQNGPEGSKGFIGNRGPSGPPGLKGTQGEEGPTGSFGELGPRVGPKGY 782

Query: 202 PGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            GEPG +G+ G  G  G  GK       GLPG+ G+ G+ G  GE+G  GP G +G+ G
Sbjct: 783 AGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGVTGSIGEKGERGSPGPVGPQGEKG 841



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 9/114 (7%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPG 212
           KRGP+G  G  G  G+PG  G +GPKGD G+       G  G  G  GL G PG+ G+ G
Sbjct: 466 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPDQALSGEKGDQGLSGLMGPPGMQGVKG 525

Query: 213 RNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G+P   G+ G+PG  G  G+ G  G +G+ GP GN G  G+ G  G+P 
Sbjct: 526 LKGHPGLPGLQGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVRGFIGSPG 579



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 82/175 (46%), Gaps = 15/175 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--- 165
            PGL GP G +G  GA+G  G  G+    G+ G PG+ G PG  G+ G  G +G KG    
Sbjct: 1237 PGLPGPKGMQGYHGAEGISGNPGKIGLPGKHGLPGIRGSPGRTGLTGSLGPQGAKGSSGP 1296

Query: 166  ------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                   G  G QG+PG  G  G +G  G  G  G  G  G+ G+P   GI G  G  G 
Sbjct: 1297 PGSPGVQGPKGEQGLPGQPGIPGKRGHQGAQGDQGPCGESGIKGQPVEHGIQGLMGFQGF 1356

Query: 220  PGKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            PG  G  G  GI G +G     G++G TGP G  G  G  G  G      ++ E+
Sbjct: 1357 PGPKGPQGDAGIVGISGPKGPVGQRGNTGPFGREGIIGPTGRTGPRGEKGFRGET 1411


>gi|32140760|ref|NP_116277.2| collagen alpha-1(XXVII) chain preproprotein [Homo sapiens]
 gi|74762504|sp|Q8IZC6.1|CORA1_HUMAN RecName: Full=Collagen alpha-1(XXVII) chain; Flags: Precursor
 gi|24251209|gb|AAN41263.1| collagen XXVII proalpha 1 chain precursor [Homo sapiens]
          Length = 1860

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 93/167 (55%), Gaps = 16/167 (9%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G+PGP+G  G EG +G +G  G 
Sbjct: 1354 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGA 1413

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
            PGR G+ G  GLPG     G+ GR G++GI G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 1414 PGRRGVQGLQGLPGP---RGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 1470

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
             G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 1471 AGKRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1510



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 104/239 (43%), Gaps = 41/239 (17%)

Query: 43   DKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGF 102
            D+GD  +   P  P  E V     + +R +  +Q    H  P  W             G 
Sbjct: 1353 DRGDRGEPGDPGYPGQEGV-----QGLRGKPGQQGQPGHPGPRGW------------PGP 1395

Query: 103  CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------- 155
              S     P G QG  G  G  G +G  G+ G RG  G  G+ G  GP G+PG       
Sbjct: 1396 KGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQ 1455

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRDGL 201
                    D G  GP G  G PG  G+PG +G  G KG+ G PG++      G +GR GL
Sbjct: 1456 QGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGL 1515

Query: 202  P---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            P   GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G
Sbjct: 1516 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVG 1574



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 87/162 (53%), Gaps = 21/162 (12%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYPGPQGI 174
           K   GAKG+MG+ G  G  G PG  G    PGP G PG++G+ GP+G     GYPG QG+
Sbjct: 684 KAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGL 743

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G+PG  G+ G+ G PG 
Sbjct: 744 PGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGL 803

Query: 235 NGTNGEK---------------GMTGPRGNRGKSGINGVPGT 261
           +G  GE                G+ GP G  G  G+ G+ G+
Sbjct: 804 DGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGS 845



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG +GPPG         KRG +G  G 
Sbjct: 1465 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGRTGL 1515

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 1516 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGP 1575

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1576 LGILGPSGLPGPKGDKGSRGDWG 1598



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 85/176 (48%), Gaps = 18/176 (10%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP G  G  G+KG  G KG++G+ GAPG  G  G QG+PG  
Sbjct: 1370 GVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPR 1429

Query: 158  GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G +G  G  GP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 1430 GVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1489

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G  G+PG+    G PGK G  G+ G+PG  G  G KG  G  G  G  G+ G+
Sbjct: 1490 GFKGESGLPGQL---GPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGL 1542



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 90/178 (50%), Gaps = 33/178 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
            G +G  G  G  G +G  G++G+ G++G PG  GP   PGP+G  G EG +G +G  G P
Sbjct: 1355 GDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAP 1414

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------------------- 204
            G +G+ G +G  GP+G +G  G  G+ G DGLPG                          
Sbjct: 1415 GRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKR 1474

Query: 205  --PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              PG+ G+PG  G  G  G+ GLPG+ G PG  GT G  G+    GN+G+ G  G PG
Sbjct: 1475 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLP---GNQGEPGSKGQPG 1529



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 94/189 (49%), Gaps = 42/189 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KG +G+ GE G+KG++GE+G PGV       G PG +G +G +G  G+PG +
Sbjct: 832  GYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGV------SGDPGFQGDKGSQGLPGFPGAR 885

Query: 173  GIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-- 215
            G PG  GK G KG               D+G PG    +G +G+ G+PG  G+PG  G  
Sbjct: 886  GKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGD---NGPEGMKGKPGARGLPGPRGQL 942

Query: 216  ----------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                            ++G PG+ G PG+ G+ G  G  G+ G  GP G +G  G  G+ 
Sbjct: 943  GPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIGLV 1002

Query: 260  GTPAICAYK 268
            G P I   K
Sbjct: 1003 GEPGIVGEK 1011



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 76/144 (52%), Gaps = 12/144 (8%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++G
Sbjct: 674 QKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQG 724

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 725 QPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 784

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G RG  G++G PG
Sbjct: 785 KMGMPGFPGVFGERGPPGLDGNPG 808



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 702 PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGL 761

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN----------- 214
           PG  G+PG +G+RG  G  G  G++G+ G  G+ GE   PGLDG PG             
Sbjct: 762 PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGL 821

Query: 215 -GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G PG  G+ G  G+ GE G+ G +G +G  G++G PG
Sbjct: 822 IGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 868



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 83/187 (44%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPK--------- 163
           GP G +G IG  G  G+ G  GE+G PGV G  G  G+PG     G+RGP          
Sbjct: 751 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGEL 810

Query: 164 ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                       GD+G  GP G PG +G +G  G +G PG  G  G  G+P   G+PG  
Sbjct: 811 GLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQ 870

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKS 253
           G  G  G+ G PG  G PG  G  G  G+                G  G  GP G +GK 
Sbjct: 871 GDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 930

Query: 254 GINGVPG 260
           G  G+PG
Sbjct: 931 GARGLPG 937



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 90/240 (37%), Gaps = 82/240 (34%)

Query: 100  QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------- 146
            QG      E   PGL+G   P+G  G  G +G+ G  GE GEKG  G++G          
Sbjct: 1179 QGLIGQRGE---PGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGV 1235

Query: 147  -----PPGPQGIPGDEGKRGPKGDMGYP---------------------------GPQGI 174
                 P G  G  G++G+ G KG  GY                            GP G 
Sbjct: 1236 TGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGA 1295

Query: 175  PGDEGKRGPKGDMGYPGRIGL---------------DGRDGLP----------------- 202
            PG  G +G  G  GY G  G+                G DG                   
Sbjct: 1296 PGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRG 1355

Query: 203  --GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              GEPG  G PG+ G+ G+ GK G  G+ G PG  G  G KG  G  G +GK G  G PG
Sbjct: 1356 DRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPG 1415



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 68/159 (42%), Gaps = 39/159 (24%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 1158 PGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGE 1217

Query: 169  PGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEP-------- 205
             G +G+ G+               EGK G +G+ G  G  G  G  G  GE         
Sbjct: 1218 KGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGP 1277

Query: 206  -------------GLDGIPGRNGMDGIPGKDGLPGKDGI 231
                         G  G PGR G  G PG  G  G  GI
Sbjct: 1278 PGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGI 1316



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 54/100 (54%), Gaps = 12/100 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G+ G  G +GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 1500 QLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQG 1559

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
             RGP G MG     GP GI G  G  GPKGD G  G  GL
Sbjct: 1560 PRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGL 1599



 Score = 46.2 bits (108), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 30/143 (20%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  GA GE G+ GE G KG  G      P G PG++G  G +G+         PG 
Sbjct: 1146 MGPKGPPGAVGEPGLPGEAGMKGDLG------PLGTPGEQGLIGQRGE---------PGL 1190

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GI 231
            EG  GP         +G DG  G  G+PG DG  G  G +G+ G+DG PG        G 
Sbjct: 1191 EGDSGP---------MGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGP 1241

Query: 232  PGTNGTNGEKGMTGPRGNRGKSG 254
             G +G  GEKG TG +G +G  G
Sbjct: 1242 EGKSGKQGEKGRTGAKGAKGYQG 1264



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 68/171 (39%), Gaps = 54/171 (31%)

Query: 144 VVGPPGPQG------------------------------------------IPGDEGKRG 161
           ++GPPGP+G                                            GD G   
Sbjct: 623 LMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSP 682

Query: 162 PKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNG 215
            K   G  G  G+PG  G  GP   KG  GYPG  G  G  G P   G PG  G PGR G
Sbjct: 683 GKAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQG 742

Query: 216 MDGI---PGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G    PG  G  G  G+P   G  G++GE+G+ G  G RGK G+ G PG
Sbjct: 743 LPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPG 793



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 18/105 (17%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKG---------APGVVGPPGPQGIPGDEGKRG 161
            PPG  GP G KG+ GA+G  G +G+ G +G         APG+ G PG +G PG  G  G
Sbjct: 917  PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDG 976

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             KG+         PGD G+ GP G+ G+ G IGL G  G+ GE G
Sbjct: 977  VKGE---------PGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKG 1012


>gi|212720733|ref|NP_001132911.1| collagen, type XXII, alpha 1 precursor [Gallus gallus]
          Length = 1599

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 96/188 (51%), Gaps = 40/188 (21%)

Query: 113 GLQGPIGQKGEIGA---------KGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G +GP GQKGE G+         KGE G    +GE+GEKG+ G+ G PG  G  G+ G+ 
Sbjct: 487 GPEGPKGQKGESGSQGLPGPRGEKGESGRAYSRGEKGEKGSLGLPGTPGKDGAKGEAGEP 546

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGLDGIPGRN 214
           G  G  G PGP G  G EGK+GP G  GY G  GL G  G        GE GLDG PG+ 
Sbjct: 547 GQPGAFGLPGPAGPKGSEGKQGPPGIKGYVGAPGLQGERGEKGTRGDKGERGLDGFPGKP 606

Query: 215 GMDGI------------------PGKDGLPGKDGIPG----TNGTNGEKGMTGPRGNRGK 252
           G++G                    G  G PG  G+PG    T G  GE+G  GPRG +G+
Sbjct: 607 GVEGKQGPAGSPGPPGGSGPKGEKGSTGEPGLPGLPGSSVPTEGLKGEQGEPGPRGPQGQ 666

Query: 253 SGINGVPG 260
            G+ G+PG
Sbjct: 667 PGLPGLPG 674



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 83/148 (56%), Gaps = 15/148 (10%)

Query: 117 PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG 176
           P GQKGE G+ G  G KG++GE G+ G+   PGP+G  G+ G+   +G+ G  G  G+PG
Sbjct: 476 PAGQKGERGSIGPEGPKGQKGESGSQGL---PGPRGEKGESGRAYSRGEKGEKGSLGLPG 532

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
             GK G KG+ G PG            +PG  G+PG  G  G  GK G PG  G  G  G
Sbjct: 533 TPGKDGAKGEAGEPG------------QPGAFGLPGPAGPKGSEGKQGPPGIKGYVGAPG 580

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             GE+G  G RG++G+ G++G PG P +
Sbjct: 581 LQGERGEKGTRGDKGERGLDGFPGKPGV 608



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 96/200 (48%), Gaps = 47/200 (23%)

Query: 113 GLQGPIGQKGEIG------AKGEMG------------VKGERGEKGAPGVVGPPGPQGIP 154
           GL GP G+KGE G       KGE G             KGE GE G PG  G PGP G  
Sbjct: 502 GLPGPRGEKGESGRAYSRGEKGEKGSLGLPGTPGKDGAKGEAGEPGQPGAFGLPGPAGPK 561

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM------GYPGRIGLDGRD--------- 199
           G EGK+GP G  GY G  G+ G+ G++G +GD       G+PG+ G++G+          
Sbjct: 562 GSEGKQGPPGIKGYVGAPGLQGERGEKGTRGDKGERGLDGFPGKPGVEGKQGPAGSPGPP 621

Query: 200 ---------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                    G  GEPGL G+PG +    +P  +GL G+ G PG  G  G+ G+ G  G  
Sbjct: 622 GGSGPKGEKGSTGEPGLPGLPGSS----VP-TEGLKGEQGEPGPRGPQGQPGLPGLPGET 676

Query: 251 GKSGINGVPGTPAICAYKRE 270
           G  G  GVPG P     K E
Sbjct: 677 GPEGKPGVPGLPGQRGKKGE 696



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 77/165 (46%), Gaps = 36/165 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPGVVGP 147
            PG  G  G  G+ GA+G  G KG+RG+                         G  G +GP
Sbjct: 1230 PGKPGEPGLPGQEGARGLPGFKGQRGDTGPPGPRGEPGATGPAGRGGPPGKDGDTGPIGP 1289

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             GP+G+ G  GK G  G  G PGP G PG +G +G  G  G PG IG  G  G PGE   
Sbjct: 1290 QGPRGLRGQPGKNGLPGSAGEPGPAGNPGPKGNKGENGSPGLPGFIGPRGPPGDPGE--- 1346

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                      G PGK+G PGK G  G+ G  GE G+ G +G +G+
Sbjct: 1347 ---------KGPPGKEGAPGKPGETGSKGERGEPGIKGEKGPQGQ 1382



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 84/187 (44%), Gaps = 55/187 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGK 159
           PG  GP   KGE G++G+    GE+GE G PG+ G PG              G+PG +G+
Sbjct: 775 PGKAGP---KGEPGSRGQ---PGEQGEVGLPGLQGLPGLRGEKGDQGGKGKDGLPGLKGE 828

Query: 160 RGPKGDMG----------------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           RG KGD G                +P   G PG +G++G +G  G PG  G+ G  G+PG
Sbjct: 829 RGEKGDTGSPGPPGIPGTTAFFTPHPRIPGEPGPKGEKGDRGTSGEPGLPGIPGEQGVPG 888

Query: 204 EPGLDGIPGRNGMD---GIPGKD------------------GLPGKDGIPGTNGTNGEKG 242
             GL G  G+ G     G PG+                   G+PG  G+PG  G  GEKG
Sbjct: 889 PVGLQGTKGQKGAQGEAGAPGEAGAVGPVGPPGPRGLPGNVGVPGNPGLPGKEGERGEKG 948

Query: 243 MTGPRGN 249
             G  G 
Sbjct: 949 DPGKEGK 955



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 97/232 (41%), Gaps = 82/232 (35%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------------------ERGEKGAPGV 144
           PGLQG  G+KG  G KGE G+ G                           E+G  G PG+
Sbjct: 579 PGLQGERGEKGTRGDKGERGLDGFPGKPGVEGKQGPAGSPGPPGGSGPKGEKGSTGEPGL 638

Query: 145 VGPPGP----QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            G PG     +G+ G++G+ GP+G  G PG  G+PG+ G   P+G  G PG  G  G+ G
Sbjct: 639 PGLPGSSVPTEGLKGEQGEPGPRGPQGQPGLPGLPGETG---PEGKPGVPGLPGQRGKKG 695

Query: 201 LPGEPGLD------------------------------GIPGR---------------NG 215
            PG PG++                              G+ G+               NG
Sbjct: 696 EPGFPGINGLIGPQGPPGPPGIAGPPGPPGTPGLPGEIGVAGKSGPPGPAGSPGKDGLNG 755

Query: 216 MDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           + G+PG+ G  G+ G    PG  G  GE G  G  G +G+ G+ G+ G P +
Sbjct: 756 LPGLPGQKGEQGEKGEEGSPGKAGPKGEPGSRGQPGEQGEVGLPGLQGLPGL 807



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 85/198 (42%), Gaps = 51/198 (25%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------------VGPPG--- 149
            L G  G KG+ G  G+ G KGE+G  G PG                       G PG   
Sbjct: 1136 LDGQKGAKGDRGITGDAGEKGEQGHPGMPGFAGAPGSPGPPGPDGAPGPIGPAGNPGDMG 1195

Query: 150  ---------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
                             GI G++GK G  G +G PG  G PG  G+ G +G  G+ G+ G
Sbjct: 1196 KDGPPGPQGPPGIPGLPGIAGNDGKDGKPGSLGEPGKPGEPGLPGQEGARGLPGFKGQRG 1255

Query: 195  ------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                          G  G  G PG DG  G  G  G  G  G PGK+G+PG+ G  G  G
Sbjct: 1256 DTGPPGPRGEPGATGPAGRGGPPGKDGDTGPIGPQGPRGLRGQPGKNGLPGSAGEPGPAG 1315

Query: 243  MTGPRGNRGKSGINGVPG 260
              GP+GN+G++G  G+PG
Sbjct: 1316 NPGPKGNKGENGSPGLPG 1333



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 54/131 (41%), Gaps = 33/131 (25%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           G+KG  G +GP GP+G      ++G  G  G PGP+G  G+ G+   +G+ G  G +GL 
Sbjct: 478 GQKGERGSIGPEGPKG------QKGESGSQGLPGPRGEKGESGRAYSRGEKGEKGSLGLP 531

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G                            PGKDG  G  G  G+ G  G  G  G  G  
Sbjct: 532 G---------------------------TPGKDGAKGEAGEPGQPGAFGLPGPAGPKGSE 564

Query: 257 GVPGTPAICAY 267
           G  G P I  Y
Sbjct: 565 GKQGPPGIKGY 575



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 15/85 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------VGPPGPQGIPGD 156
            PG  G  G  GE G  G  G KG +GE G+PG+                GPPG +G PG 
Sbjct: 1299 PGKNGLPGSAGEPGPAGNPGPKGNKGENGSPGLPGFIGPRGPPGDPGEKGPPGKEGAPGK 1358

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKR 181
             G+ G KG+ G PG +G  G +G++
Sbjct: 1359 PGETGSKGERGEPGIKGEKGPQGQK 1383



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 63/160 (39%), Gaps = 54/160 (33%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGD---------------------- 186
            G +GK G  G+ G PG  G+PG EG RG       +GD                      
Sbjct: 1219 GKDGKPGSLGEPGKPGEPGLPGQEGARGLPGFKGQRGDTGPPGPRGEPGATGPAGRGGPP 1278

Query: 187  -----------MGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPG----- 227
                        G  G  G  G++GLP   GEPG  G PG  G  G  G  GLPG     
Sbjct: 1279 GKDGDTGPIGPQGPRGLRGQPGKNGLPGSAGEPGPAGNPGPKGNKGENGSPGLPGFIGPR 1338

Query: 228  -------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   + G PG  G  G+ G TG +G RG+ GI G  G
Sbjct: 1339 GPPGDPGEKGPPGKEGAPGKPGETGSKGERGEPGIKGEKG 1378



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 50/134 (37%), Gaps = 46/134 (34%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG----------------------------- 197
           G  GP+G PG  G+ G +G++G PG  GL G                             
Sbjct: 776 GKAGPKGEPGSRGQPGEQGEVGLPGLQGLPGLRGEKGDQGGKGKDGLPGLKGERGEKGDT 835

Query: 198 -----------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                               +PGEPG  G  G  G  G PG  G+PG+ G+PG  G  G 
Sbjct: 836 GSPGPPGIPGTTAFFTPHPRIPGEPGPKGEKGDRGTSGEPGLPGIPGEQGVPGPVGLQGT 895

Query: 241 KGMTGPRGNRGKSG 254
           KG  G +G  G  G
Sbjct: 896 KGQKGAQGEAGAPG 909


>gi|395821641|ref|XP_003784146.1| PREDICTED: collagen alpha-1(XI) chain isoform 1 [Otolemur
           garnettii]
          Length = 1823

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 82/145 (56%), Gaps = 9/145 (6%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G  G +G  G+ G+ GP+G+ G  GP+G     
Sbjct: 780 GVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKG----- 834

Query: 179 GKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            + GP GD+G PG+ G  G+    GLPG PG  G  G  G  G PG +G  G  G+ G  
Sbjct: 835 -RAGPTGDLGPPGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKP 893

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G++G TGPRG+RG  G  G PG
Sbjct: 894 GPRGQRGPTGPRGSRGARGPTGKPG 918



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 58/119 (48%), Gaps = 24/119 (20%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDE 178
            G  G +GE G KGE G +G  G  GP GPQG     GK GP+G  G PGP   QG+PG  
Sbjct: 1386 GAEGRQGEKGAKGEAGAEGPSGKTGPVGPQGP---AGKPGPEGLRGIPGPVGEQGLPGAA 1442

Query: 179  GKR------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G+                   G KG+ G+PG IGL G  G  GE G  G+PG  G  G 
Sbjct: 1443 GQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGA 1501



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           + ++G      +  P G  GP G KG  G  G++G  G+ GEKG  GV       G+PG 
Sbjct: 809 MGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDLGPPGQAGEKGKLGVP------GLPGY 862

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            G++GPKG  G+P   G PG  G++G +G  G PG  G  G  G  G  G  G  G+ G
Sbjct: 863 PGRQGPKGSTGFP---GFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPG 918



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 68/127 (53%), Gaps = 9/127 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G+ G +G  GV+G  G  G PG  G PG  G  G  G+ G KGD G+ G  G+PGD+
Sbjct: 570 GESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPGLPGDK 629

Query: 179 GKRGPK---------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G RG +         GD G  G  G  G  GLPGE G  G+ G  G  GIPG+ G+ G D
Sbjct: 630 GHRGERGPQGPPGAPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGIPGQPGMAGVD 689

Query: 230 GIPGTNG 236
           G PG  G
Sbjct: 690 GPPGPKG 696



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 60/122 (49%), Gaps = 33/122 (27%)

Query: 112 PGLQGPIG------------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           PG QGP G            ++G  GA G  G+ GE G KG  G  G PG   +PGD+G 
Sbjct: 575 PGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPG---LPGDKGH 631

Query: 160 RGPK---------------GDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGL 201
           RG +               G+ G  GP+G+PG+ G R   GP+G  G PG+ G+ G DG 
Sbjct: 632 RGERGPQGPPGAPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGIPGQPGMAGVDGP 691

Query: 202 PG 203
           PG
Sbjct: 692 PG 693



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 71/147 (48%), Gaps = 27/147 (18%)

Query: 144 VVGPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           + GPPGP G+       G  G  G KG+ G PGPQG  G +G  GP G  G  GR G DG
Sbjct: 544 LRGPPGPMGLTGRPGPVGGPGSAGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADG 603

Query: 198 RDGLPGEPG------LDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTNG 239
             G+PGEPG       DG+PG  G  G  G+            DG+ G+DG  G  G  G
Sbjct: 604 GRGMPGEPGSKGDRGFDGLPGLPGDKGHRGERGPQGPPGAPGDDGMRGEDGEIGPRGLPG 663

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICA 266
           E    GPRG  G  G  G+PG P +  
Sbjct: 664 E---AGPRGLLGPRGTPGIPGQPGMAG 687



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 82/214 (38%), Gaps = 69/214 (32%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---------- 168
           G+ GEIG +G  G  G RG  G  G  G PG  G+ G +G  GPKG+MG           
Sbjct: 651 GEDGEIGPRGLPGEAGPRGLLGPRGTPGIPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQ 710

Query: 169 --PGPQ------------------------------GIPGDEGKRGPKGD---------- 186
             PGPQ                              G PG  GK G  G+          
Sbjct: 711 GNPGPQGLPGPQGPIGPPGEKGPQGKPGLGGLPGADGPPGHPGKEGQSGEKGALGPPGPQ 770

Query: 187 --------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                    G  G  G+ G  G  GE G DG PG  G  G+ G  G  G+ G  G +G  
Sbjct: 771 GPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPE 830

Query: 239 GEKGMTGPRGN---------RGKSGINGVPGTPA 263
           G KG  GP G+         +GK G+ G+PG P 
Sbjct: 831 GPKGRAGPTGDLGPPGQAGEKGKLGVPGLPGYPG 864



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 60/145 (41%), Gaps = 45/145 (31%)

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------- 179
            G  G  G PGPQGI    GK GP G  G+PG +G+PG +G                    
Sbjct: 1020 GKEGAKGDPGPQGI---SGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP 1076

Query: 180  -KRGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
             +RG  G                     + G PG  G  G  G  G  G  G+PG  G  
Sbjct: 1077 GERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPA 1136

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG+DG  G+ G PG  G+ G+KG
Sbjct: 1137 GSPGEDGDKGEIGEPGQKGSKGDKG 1161



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 21/102 (20%)

Query: 138  EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            EKGAPG  GP GP G      + G +G +G PGP G  G  G+ G KG++G PG+ G  G
Sbjct: 1105 EKGAPGEKGPQGPAG------RDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKG 1158

Query: 198  RDG---------------LPGEPGLDGIPGRNGMDGIPGKDG 224
              G                PG  G DG PG  G  G+ G+ G
Sbjct: 1159 DKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1200



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 77/184 (41%), Gaps = 51/184 (27%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------------ 163
            G+ GAKG+ G +G  G+ G  G+ G PG +G+PG +G  G K                  
Sbjct: 1020 GKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGER 1079

Query: 164  GDMGYPGP------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  G  GP                  +G PG++G +GP G  G  G +GL G  G  G P
Sbjct: 1080 GSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSP 1139

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKD------------GIPGTNGTNGEKGMTGPRGNRGKS 253
            G DG  G  G  G  G  G  G++            G PG  G +GE    GPRG +G  
Sbjct: 1140 GEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGE---PGPRGQQGMF 1196

Query: 254  GING 257
            G  G
Sbjct: 1197 GQKG 1200



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 90/239 (37%), Gaps = 90/239 (37%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---------KGERGEK------------GAPGVVGPPGP 150
           PG  G  G  GE G+KG+ G          KG RGE+            G  G  G  GP
Sbjct: 599 PGADGGRGMPGEPGSKGDRGFDGLPGLPGDKGHRGERGPQGPPGAPGDDGMRGEDGEIGP 658

Query: 151 QGIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGY------------PG---- 191
           +G+PG+ G RG   P+G  G PG  G+ G +G  GPKG+MG             PG    
Sbjct: 659 RGLPGEAGPRGLLGPRGTPGIPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGL 718

Query: 192 --------------------RIGLDGRDGLPGEPGLDG---------------------- 209
                                 GL G DG PG PG +G                      
Sbjct: 719 PGPQGPIGPPGEKGPQGKPGLGGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGP 778

Query: 210 --IPGRNGMDGIPGKDGLPGKDGIP------GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             + G +G+ G+ G  G  G+DG P      G  G  GE G  GPRG  G  G  G  G
Sbjct: 779 RGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAG 837



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 73/170 (42%), Gaps = 45/170 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERG------------EKGAPGVVGP----------- 147
            P GL+G  G++G  GA+G  G+KG  G            E+G+ G  GP           
Sbjct: 1039 PAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG 1098

Query: 148  ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                 G +G PG++G +GP G  G  GP G+P      GP G  G PG  G  G  G PG
Sbjct: 1099 PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP------GPAGPAGSPGEDGDKGEIGEPG 1152

Query: 204  EPGLDGIPGRNGMD------------GIPGKDGLPGKDGIPGTNGTNGEK 241
            + G  G  G NG              GI G DG PG  G  G  G  G++
Sbjct: 1153 QKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDE 1202



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 52/111 (46%), Gaps = 15/111 (13%)

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G  G QG  G +G+ G +G  G  G +G  G  G PG  GL GIPG  G  G+PG  G 
Sbjct: 1385 AGAEGRQGEKGAKGEAGAEGPSGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQ 1444

Query: 226  PGKDGI------------PGTNGTNGEK---GMTGPRGNRGKSGINGVPGT 261
             G  G             PG+ G  G     G+ GP G +G+ G  G+PGT
Sbjct: 1445 DGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGT 1495


>gi|148699169|gb|EDL31116.1| procollagen, type XXVII, alpha 1, isoform CRA_a [Mus musculus]
          Length = 1845

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 89/167 (53%), Gaps = 16/167 (9%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G+EG +G  G  G 
Sbjct: 1339 RGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGP 1398

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKGMTGP 246
             GR G  G  GLPG     G+ GR G +G  G DG+PG+DG P   G  G +G+ G  GP
Sbjct: 1399 SGRRGTQGLQGLPGP---RGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGP 1455

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
             G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 1456 AGRRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1495



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 85/169 (50%), Gaps = 18/169 (10%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  GA GE G+ G+ G KG  G +GPPG QG+ G  G+ G +GD G  GP G+ GD
Sbjct: 1131 MGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGD 1190

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
             G  GP G+ G  G+ GL G DG PG PG+ G+PGR G  G  G+ G  G  G  G  G 
Sbjct: 1191 RGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGY 1250

Query: 238  NGE------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             GE                  +G  GP G  G+ G  G PG      +K
Sbjct: 1251 LGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHK 1299



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 95/200 (47%), Gaps = 17/200 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G  G  G KGE G KG PG  GP G +G  G +G  GP+G +G  GP
Sbjct: 1363 PGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGP 1422

Query: 172  QG------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            +G      IPG +G+ G +GD G  G  G  G  G  G PG+ G+PG  G  G  G+ GL
Sbjct: 1423 EGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGL 1482

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI 285
            PG+ G PG  GT G  G+    GN+G+ G  G PG      +   +    P      +  
Sbjct: 1483 PGQLGPPGKRGTEGGTGLP---GNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGF 1539

Query: 286  --------PPTIVGSEHIFS 297
                    PP ++G E I  
Sbjct: 1540 KGIQGPRGPPGLMGKEGIIG 1559



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 82/158 (51%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KGE G KG+ G  G  G +G  G+ G PGP+G+ G +G  G  G  G PG
Sbjct: 1374 PRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPG 1433

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              G PG +G +G  GD G  G  G  G  G+ G PG  G PG  G  G+PG+ G PGK G
Sbjct: 1434 RDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRG 1493

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G  G  G +G  G +G  G SG  G PG   +   K
Sbjct: 1494 TEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPK 1531



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 90/170 (52%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  GA G  G +G+ G +G+PG  G PG QG PG  G  GPKG  GY   
Sbjct: 687 PGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGL 746

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGK 222
           PG  G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG  G+ G PG 
Sbjct: 747 PGLFGLPGSDGER---GLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 803

Query: 223 DGL------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL            PG  G+ G  G  GE G+ G +G +G  G++G PG
Sbjct: 804 LGLIGDTGALGPIGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPG 853



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 82/163 (50%), Gaps = 24/163 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+ G+ G  G+ GV+G RGE G  G  G PGP+G PG +G +G +G  G PG  G     
Sbjct: 1343 GEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAG---PS 1399

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------------- 219
            G+RG +G  G PG  G+ GR G  G  G DGIPGR+G  G                    
Sbjct: 1400 GRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRR 1459

Query: 220  --PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              PG  GLPG  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1460 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPG 1502



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 76/143 (53%), Gaps = 12/143 (8%)

Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GAKG MG+ G          +G KG PG  G PG QG PG EG  G KG   YPG QG P
Sbjct: 673 GAKGNMGLPGLSGNPGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKG---YPGRQGFP 729

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G PG  G  G+ G PG +
Sbjct: 730 GPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLD 789

Query: 236 GTNGEKGMTGPRGNRGKSGINGV 258
           G  GE G+ GP G  G  G  G 
Sbjct: 790 GNPGEIGLPGPPGVLGLIGDTGA 812



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 81/146 (55%), Gaps = 6/146 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGD---EGKRGPKGD 165
            PG QG  G  G+ G  G  G +G  G  G PG  GPPG     G+PG     GKRG +G 
Sbjct: 1438 PGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGG 1497

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+
Sbjct: 1498 TGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGI 1557

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G  G+ G +G  G KG  G RG+ G
Sbjct: 1558 IGPPGMLGPSGLPGPKGDRGSRGDLG 1583



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 89/178 (50%), Gaps = 30/178 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPKGDM 166
            G +GP G+ G+ G  G  G +G +G  G  GVVG  GP+      GIPG +G+ G +GD 
Sbjct: 1385 GEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQ 1444

Query: 167  ---------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                                 G PG QG PG +G+ G  G +G PG+ G +G  GLP   
Sbjct: 1445 GNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQ 1504

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G PG
Sbjct: 1505 GEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPG 1562



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 94/192 (48%), Gaps = 24/192 (12%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G    T    P G  GP G KG +G  GE G+KG++GE+G PGV G PG QG  G  G  
Sbjct: 805 GLIGDTGALGPIGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLP 864

Query: 161 GPKGDMGYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G  G  G PGP G  GD+G           G  GD+G PG  G +G  G PG  GL G P
Sbjct: 865 GLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPP 924

Query: 212 GRNG---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G+ G               ++G PG+ G PG+ G+ G+ G  G+ G  GP G +G  G  
Sbjct: 925 GQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFI 984

Query: 257 GVPGTPAICAYK 268
           G+ G P I   K
Sbjct: 985 GLVGEPGIVGEK 996



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 81/166 (48%), Gaps = 18/166 (10%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G  G PG+ G PGP G          KG  G+PG  G PG++G
Sbjct: 659 QKGDPGLSPGQAHDGAKGNMGLPGLSGNPGPLGR---------KGHKGHPGAAGHPGEQG 709

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR G  G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 710 QPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 769

Query: 237 TNGEKGMTGPRGNRGKSGIN------GVPGTPAICAYKRESCSLLP 276
             G  G  G  G RG  G++      G+PG P +     ++ +L P
Sbjct: 770 EMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGP 815



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 85/190 (44%), Gaps = 42/190 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKG------DM 166
           GP G +G IG  G  G+ G  GE+G PGV G  G  G    PGD G+RGP G      ++
Sbjct: 736 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEI 795

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PGP G+ G  G  G  G +GYPG  G+ G  G  GEPGL G  G  G+ G+ G  G  
Sbjct: 796 GLPGPPGVLGLIGDTGALGPIGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQ 855

Query: 227 GKDGI------------PGTNGTNGEKGM---------------------TGPRGNRGKS 253
           G  G             PG  G  G+KG                       GP G +GK 
Sbjct: 856 GDKGSHGLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 915

Query: 254 GINGVPGTPA 263
           G  G+PG P 
Sbjct: 916 GARGLPGPPG 925



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 94/255 (36%), Gaps = 82/255 (32%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+  +G      ++ P G  G  G +G+ G  GE G KG+ G KG  G  GPPG  G+PG
Sbjct: 1166 LIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPG 1225

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKGDMGYPGRIG 194
             EGK G +G+ G  G +G  G +G                      RG  G  G PGR+G
Sbjct: 1226 REGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMG 1285

Query: 195  LDGRDGL----------------------------------------------------P 202
              G  GL                                                    P
Sbjct: 1286 AQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEP 1345

Query: 203  GEPG---------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G+PG         L G PG+ G  G PG  G PG  G  G  G  G+ G  GP G RG  
Sbjct: 1346 GDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQ 1405

Query: 254  GINGVPGTPAICAYK 268
            G+ G+PG   +   +
Sbjct: 1406 GLQGLPGPRGVVGRQ 1420



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 84/187 (44%), Gaps = 36/187 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
            GL G  G KG  G +G  G  GE+G KG  G VGP G  G PG +G  G +G  G  G  
Sbjct: 1039 GLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFL 1098

Query: 171  ----------PQGIPGDEG------------KRGPKGDMGYPGRIGLDGRDGL------- 201
                       +G+PG+ G            + GPKG  G  G  GL G  G+       
Sbjct: 1099 GIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPL 1158

Query: 202  --PGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
              PGE GL    G PG  G  G  G DGL G  G PG +G +GEKG  G +G  G  G  
Sbjct: 1159 GPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPP 1218

Query: 257  GVPGTPA 263
            G+ G P 
Sbjct: 1219 GITGVPG 1225



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 92/235 (39%), Gaps = 85/235 (36%)

Query: 111  PPGLQGPIGQKGEIGAK---------------------GEMGVKGERGEKGAPGVVGPPG 149
            PPG QG IGQ+GE G +                     GE G KG+ G KG  G  GPPG
Sbjct: 1160 PPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPG 1219

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKGDMG 188
              G+PG EGK G +G+ G  G +G  G +G                      RG  G  G
Sbjct: 1220 ITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTG 1279

Query: 189  YPGRIGLDGRDGLPGEPGLDGI------------PGRNGMDGI----------------- 219
             PGR+G  G  GL G  G  GI             G  G DG                  
Sbjct: 1280 APGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDR 1339

Query: 220  -----PGKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPG 260
                 PG  G PG++G+ G  G  G+         +G  GP+G++G+ G  G PG
Sbjct: 1340 GDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPG 1394



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 85/181 (46%), Gaps = 30/181 (16%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            ++G  G++G +G +G  G  GP G QG  G +G+ GP+G  G PG QG  G+ G  G KG
Sbjct: 1037 SRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKG 1096

Query: 186  DMGYPGRIGLDGRDGLPGEPGLD------------------------GIPGRNGMD---- 217
             +G PG  G  G  GLPGEPG                          G+PG +GM     
Sbjct: 1097 FLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLG 1156

Query: 218  --GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              G PG+ GL G+ G PG  G +G  G  G +G+RG  G +G  G       K E  S  
Sbjct: 1157 PLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPG 1216

Query: 276  P 276
            P
Sbjct: 1217 P 1217



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 78/189 (41%), Gaps = 51/189 (26%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---------------GKRGPKGDMG 167
            +IG  G+ G +G +G+ GA G+ GPPG  G  GDE               G++G  G  G
Sbjct: 899  DIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPG 958

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI----------------- 210
              G +G PGD G+ GP G+ G  G IGL G  G+ GE G  G+                 
Sbjct: 959  LDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 1018

Query: 211  -------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                                G  GM G  G  G  G DG  G  G+ G KG  GPRG  G
Sbjct: 1019 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1078

Query: 252  KSGINGVPG 260
            + G  G  G
Sbjct: 1079 QPGQQGAAG 1087



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 53/100 (53%), Gaps = 18/100 (18%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G  G  G +GE G KG+    GE G PGV G  GP+G PGD      +G
Sbjct: 1485 QLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQG 1544

Query: 159  KRGPKGDMGYP---------GPQGIPGDEGKRGPKGDMGY 189
             RGP G MG           GP G+PG +G RG +GD+G 
Sbjct: 1545 PRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDLGL 1584



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 90/231 (38%), Gaps = 63/231 (27%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           I L  + G   S  E   PG+ G  G+ G  G  G+ G +G  G  G PG +G PGP G+
Sbjct: 744 IGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 803

Query: 154 PGDEGKRGPKGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-- 208
            G  G  G  G +GYPGP+G+ G     G+ G KGD G  G  G+ G  G  G+ G    
Sbjct: 804 LGLIGDTGALGPIGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGL 863

Query: 209 -------------------------------------GIPGRNGMDGIPGKDGLPGKDGI 231
                                                G PG NG +G+ GK   PG  G+
Sbjct: 864 PGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGK---PGARGL 920

Query: 232 PGTNGTNGEKGMTGPRGN------------RGKSGINGVPGTPAICAYKRE 270
           PG        G  GP G+             G+ G  G PG P +   K E
Sbjct: 921 PGP------PGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGE 965



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 83/196 (42%), Gaps = 51/196 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVGPPG 149
            PPG  GP G KG+ GA+G  G                     ++G+ G KG PG  G  G
Sbjct: 902  PPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDG 961

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIG 194
             +G PGD G+ GP G+ G  G  G+ G+ G  G KGD               MG+PG  G
Sbjct: 962  SKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPG 1021

Query: 195  ------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDG---LPGKDGIPGTNGTNG 239
                          G  GLPG  G  G  G  G DG  G+ G   L G+ G  G  G  G
Sbjct: 1022 GIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPG 1081

Query: 240  EKGMTGPRGNRGKSGI 255
            ++G  G RG+ G  G 
Sbjct: 1082 QQGAAGERGHSGAKGF 1097


>gi|116063546|ref|NP_079961.3| collagen alpha-1(XXVII) chain precursor [Mus musculus]
 gi|81871737|sp|Q5QNQ9.1|CORA1_MOUSE RecName: Full=Collagen alpha-1(XXVII) chain; Flags: Precursor
          Length = 1845

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 89/167 (53%), Gaps = 16/167 (9%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G+EG +G  G  G 
Sbjct: 1339 RGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGP 1398

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKGMTGP 246
             GR G  G  GLPG     G+ GR G +G  G DG+PG+DG P   G  G +G+ G  GP
Sbjct: 1399 SGRRGTQGLQGLPGP---RGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGP 1455

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
             G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 1456 AGRRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1495



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 85/169 (50%), Gaps = 18/169 (10%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  GA GE G+ G+ G KG  G +GPPG QG+ G  G+ G +GD G  GP G+ GD
Sbjct: 1131 MGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGD 1190

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
             G  GP G+ G  G+ GL G DG PG PG+ G+PGR G  G  G+ G  G  G  G  G 
Sbjct: 1191 RGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGY 1250

Query: 238  NGE------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             GE                  +G  GP G  G+ G  G PG      +K
Sbjct: 1251 LGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHK 1299



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 95/200 (47%), Gaps = 17/200 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G  G  G KGE G KG PG  GP G +G  G +G  GP+G +G  GP
Sbjct: 1363 PGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGP 1422

Query: 172  Q------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            +      GIPG +G+ G +GD G  G  G  G  G  G PG+ G+PG  G  G  G+ GL
Sbjct: 1423 EGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGL 1482

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI 285
            PG+ G PG  GT G  G+    GN+G+ G  G PG      +   +    P      +  
Sbjct: 1483 PGQLGPPGKRGTEGGTGLP---GNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGF 1539

Query: 286  --------PPTIVGSEHIFS 297
                    PP ++G E I  
Sbjct: 1540 KGIQGPRGPPGLMGKEGIIG 1559



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 82/158 (51%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KGE G KG+ G  G  G +G  G+ G PGP+G+ G +G  G  G  G PG
Sbjct: 1374 PRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPG 1433

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              G PG +G +G  GD G  G  G  G  G+ G PG  G PG  G  G+PG+ G PGK G
Sbjct: 1434 RDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRG 1493

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G  G  G +G  G +G  G SG  G PG   +   K
Sbjct: 1494 TEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPK 1531



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 90/170 (52%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  GA G  G +G+ G +G+PG  G PG QG PG  G  GPKG  GY   
Sbjct: 687 PGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGL 746

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGK 222
           PG  G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG  G+ G PG 
Sbjct: 747 PGLFGLPGSDGER---GLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 803

Query: 223 DGL------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL            PG  G+ G  G  GE G+ G +G +G  G++G PG
Sbjct: 804 LGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPG 853



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 82/163 (50%), Gaps = 24/163 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+ G+ G  G+ GV+G RGE G  G  G PGP+G PG +G +G +G  G PG  G     
Sbjct: 1343 GEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAG---PS 1399

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------------- 219
            G+RG +G  G PG  G+ GR G  G  G DGIPGR+G  G                    
Sbjct: 1400 GRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRR 1459

Query: 220  --PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              PG  GLPG  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1460 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPG 1502



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 76/143 (53%), Gaps = 12/143 (8%)

Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GAKG MG+ G          +G KG PG  G PG QG PG EG  G K   GYPG QG P
Sbjct: 673 GAKGNMGLPGLSGNPGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAK---GYPGRQGFP 729

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G PG  G  G+ G PG +
Sbjct: 730 GPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLD 789

Query: 236 GTNGEKGMTGPRGNRGKSGINGV 258
           G  GE G+ GP G  G  G  G 
Sbjct: 790 GNPGEIGLPGPPGVLGLIGDTGA 812



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 81/146 (55%), Gaps = 6/146 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGD---EGKRGPKGD 165
            PG QG  G  G+ G  G  G +G  G  G PG  GPPG     G+PG     GKRG +G 
Sbjct: 1438 PGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGG 1497

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+
Sbjct: 1498 TGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGI 1557

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G  G+ G +G  G KG  G RG+ G
Sbjct: 1558 IGPPGMLGPSGLPGPKGDRGSRGDLG 1583



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 89/178 (50%), Gaps = 30/178 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPKGDM 166
            G +GP G+ G+ G  G  G +G +G  G  GVVG  GP+      GIPG +G+ G +GD 
Sbjct: 1385 GEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQ 1444

Query: 167  ---------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                                 G PG QG PG +G+ G  G +G PG+ G +G  GLP   
Sbjct: 1445 GNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQ 1504

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G PG
Sbjct: 1505 GEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPG 1562



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 94/192 (48%), Gaps = 24/192 (12%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G    T    P G  GP G KG +G  GE G+KG++GE+G PGV G PG QG  G  G  
Sbjct: 805 GLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLP 864

Query: 161 GPKGDMGYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G  G  G PGP G  GD+G           G  GD+G PG  G +G  G PG  GL G P
Sbjct: 865 GLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPP 924

Query: 212 GRNG---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G+ G               ++G PG+ G PG+ G+ G+ G  G+ G  GP G +G  G  
Sbjct: 925 GQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFI 984

Query: 257 GVPGTPAICAYK 268
           G+ G P I   K
Sbjct: 985 GLVGEPGIVGEK 996



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 85/173 (49%), Gaps = 33/173 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEM------------GVKGERGE---------------KGAPGV 144
            PG QG  G++G  GAKG +            G+ GE G                KG PG 
Sbjct: 1080 PGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGA 1139

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            VG PG   +PGD G +G  G +G PG QG+ G  G+ G +GD G    +G DG  G  G+
Sbjct: 1140 VGEPG---LPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGP---VGPDGLKGDRGD 1193

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG DG  G  G +G+ G+DG PG  GI G  G  G+ G  G +G RG  G  G
Sbjct: 1194 PGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKG 1246



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 81/166 (48%), Gaps = 18/166 (10%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G  G PG+ G PGP G          KG  G+PG  G PG++G
Sbjct: 659 QKGDPGLSPGQAHDGAKGNMGLPGLSGNPGPLGR---------KGHKGHPGAAGHPGEQG 709

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR G  G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 710 QPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 769

Query: 237 TNGEKGMTGPRGNRGKSGIN------GVPGTPAICAYKRESCSLLP 276
             G  G  G  G RG  G++      G+PG P +     ++ +L P
Sbjct: 770 EMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGP 815



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 85/190 (44%), Gaps = 42/190 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKG------DM 166
           GP G +G IG  G  G+ G  GE+G PGV G  G  G    PGD G+RGP G      ++
Sbjct: 736 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEI 795

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PGP G+ G  G  G  G +GYPG  G+ G  G  GEPGL G  G  G+ G+ G  G  
Sbjct: 796 GLPGPPGVLGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQ 855

Query: 227 GKDGI------------PGTNGTNGEKGM---------------------TGPRGNRGKS 253
           G  G             PG  G  G+KG                       GP G +GK 
Sbjct: 856 GDKGSHGLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 915

Query: 254 GINGVPGTPA 263
           G  G+PG P 
Sbjct: 916 GARGLPGPPG 925



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 94/255 (36%), Gaps = 82/255 (32%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+  +G      ++ P G  G  G +G+ G  GE G KG+ G KG  G  GPPG  G+PG
Sbjct: 1166 LIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPG 1225

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKGDMGYPGRIG 194
             EGK G +G+ G  G +G  G +G                      RG  G  G PGR+G
Sbjct: 1226 REGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMG 1285

Query: 195  LDGRDGL----------------------------------------------------P 202
              G  GL                                                    P
Sbjct: 1286 AQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEP 1345

Query: 203  GEPG---------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G+PG         L G PG+ G  G PG  G PG  G  G  G  G+ G  GP G RG  
Sbjct: 1346 GDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQ 1405

Query: 254  GINGVPGTPAICAYK 268
            G+ G+PG   +   +
Sbjct: 1406 GLQGLPGPRGVVGRQ 1420



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 84/187 (44%), Gaps = 36/187 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
            GL G  G KG  G +G  G  GE+G KG  G VGP G  G PG +G  G +G  G  G  
Sbjct: 1039 GLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFL 1098

Query: 171  ----------PQGIPGDEG------------KRGPKGDMGYPGRIGLDGRDGL------- 201
                       +G+PG+ G            + GPKG  G  G  GL G  G+       
Sbjct: 1099 GIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPL 1158

Query: 202  --PGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
              PGE GL    G PG  G  G  G DGL G  G PG +G +GEKG  G +G  G  G  
Sbjct: 1159 GPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPP 1218

Query: 257  GVPGTPA 263
            G+ G P 
Sbjct: 1219 GITGVPG 1225



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 92/235 (39%), Gaps = 85/235 (36%)

Query: 111  PPGLQGPIGQKGEIGAK---------------------GEMGVKGERGEKGAPGVVGPPG 149
            PPG QG IGQ+GE G +                     GE G KG+ G KG  G  GPPG
Sbjct: 1160 PPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPG 1219

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKGDMG 188
              G+PG EGK G +G+ G  G +G  G +G                      RG  G  G
Sbjct: 1220 ITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTG 1279

Query: 189  YPGRIGLDGRDGLPGEPGLDGI------------PGRNGMDGI----------------- 219
             PGR+G  G  GL G  G  GI             G  G DG                  
Sbjct: 1280 APGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDR 1339

Query: 220  -----PGKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPG 260
                 PG  G PG++G+ G  G  G+         +G  GP+G++G+ G  G PG
Sbjct: 1340 GDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPG 1394



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 85/181 (46%), Gaps = 30/181 (16%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            ++G  G++G +G +G  G  GP G QG  G +G+ GP+G  G PG QG  G+ G  G KG
Sbjct: 1037 SRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKG 1096

Query: 186  DMGYPGRIGLDGRDGLPGEPGLD------------------------GIPGRNGMD---- 217
             +G PG  G  G  GLPGEPG                          G+PG +GM     
Sbjct: 1097 FLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLG 1156

Query: 218  --GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              G PG+ GL G+ G PG  G +G  G  G +G+RG  G +G  G       K E  S  
Sbjct: 1157 PLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPG 1216

Query: 276  P 276
            P
Sbjct: 1217 P 1217



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 78/189 (41%), Gaps = 51/189 (26%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---------------GKRGPKGDMG 167
            +IG  G+ G +G +G+ GA G+ GPPG  G  GDE               G++G  G  G
Sbjct: 899  DIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPG 958

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI----------------- 210
              G +G PGD G+ GP G+ G  G IGL G  G+ GE G  G+                 
Sbjct: 959  LDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 1018

Query: 211  -------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                                G  GM G  G  G  G DG  G  G+ G KG  GPRG  G
Sbjct: 1019 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1078

Query: 252  KSGINGVPG 260
            + G  G  G
Sbjct: 1079 QPGQQGAAG 1087



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 53/100 (53%), Gaps = 18/100 (18%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G  G  G +GE G KG+    GE G PGV G  GP+G PGD      +G
Sbjct: 1485 QLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQG 1544

Query: 159  KRGPKGDMGYP---------GPQGIPGDEGKRGPKGDMGY 189
             RGP G MG           GP G+PG +G RG +GD+G 
Sbjct: 1545 PRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDLGL 1584



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 90/231 (38%), Gaps = 63/231 (27%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           I L  + G   S  E   PG+ G  G+ G  G  G+ G +G  G  G PG +G PGP G+
Sbjct: 744 IGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 803

Query: 154 PGDEGKRGPKGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-- 208
            G  G  G  G +GYPGP+G+ G     G+ G KGD G  G  G+ G  G  G+ G    
Sbjct: 804 LGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGL 863

Query: 209 -------------------------------------GIPGRNGMDGIPGKDGLPGKDGI 231
                                                G PG NG +G+ GK   PG  G+
Sbjct: 864 PGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGK---PGARGL 920

Query: 232 PGTNGTNGEKGMTGPRGN------------RGKSGINGVPGTPAICAYKRE 270
           PG        G  GP G+             G+ G  G PG P +   K E
Sbjct: 921 PGP------PGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGE 965



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 83/196 (42%), Gaps = 51/196 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVGPPG 149
            PPG  GP G KG+ GA+G  G                     ++G+ G KG PG  G  G
Sbjct: 902  PPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDG 961

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIG 194
             +G PGD G+ GP G+ G  G  G+ G+ G  G KGD               MG+PG  G
Sbjct: 962  SKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPG 1021

Query: 195  ------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDG---LPGKDGIPGTNGTNG 239
                          G  GLPG  G  G  G  G DG  G+ G   L G+ G  G  G  G
Sbjct: 1022 GIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPG 1081

Query: 240  EKGMTGPRGNRGKSGI 255
            ++G  G RG+ G  G 
Sbjct: 1082 QQGAAGERGHSGAKGF 1097


>gi|28204656|gb|AAN87341.2| collagen type XXVII proalpha 1 chain [Mus musculus]
          Length = 1845

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 89/167 (53%), Gaps = 16/167 (9%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G+EG +G  G  G 
Sbjct: 1339 RGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGP 1398

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKGMTGP 246
             GR G  G  GLPG     G+ GR G +G  G DG+PG+DG P   G  G +G+ G  GP
Sbjct: 1399 SGRRGTQGLQGLPGP---RGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGP 1455

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
             G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 1456 AGRRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1495



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 85/169 (50%), Gaps = 18/169 (10%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  GA GE G+ G+ G KG  G +GPPG QG+ G  G+ G +GD G  GP G+ GD
Sbjct: 1131 MGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGD 1190

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
             G  GP G+ G  G+ GL G DG PG PG+ G+PGR G  G  G+ G  G  G  G  G 
Sbjct: 1191 RGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGY 1250

Query: 238  NGE------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             GE                  +G  GP G  G+ G  G PG      +K
Sbjct: 1251 LGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHK 1299



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 95/200 (47%), Gaps = 17/200 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G  G  G KGE G KG PG  GP G +G  G +G  GP+G +G  GP
Sbjct: 1363 PGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGP 1422

Query: 172  Q------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            +      GIPG +G+ G +GD G  G  G  G  G  G PG+ G+PG  G  G  G+ GL
Sbjct: 1423 EGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGL 1482

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI 285
            PG+ G PG  GT G  G+    GN+G+ G  G PG      +   +    P      +  
Sbjct: 1483 PGQLGPPGKRGTEGGTGLP---GNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGF 1539

Query: 286  --------PPTIVGSEHIFS 297
                    PP ++G E I  
Sbjct: 1540 KGIQGPRGPPGLMGKEGIIG 1559



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 82/158 (51%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KGE G KG+ G  G  G +G  G+ G PGP+G+ G +G  G  G  G PG
Sbjct: 1374 PRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPG 1433

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              G PG +G +G  GD G  G  G  G  G+ G PG  G PG  G  G+PG+ G PGK G
Sbjct: 1434 RDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRG 1493

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G  G  G +G  G +G  G SG  G PG   +   K
Sbjct: 1494 TEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPK 1531



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 90/170 (52%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  GA G  G +G+ G +G+PG  G PG QG PG  G  GPKG  GY   
Sbjct: 687 PGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGL 746

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGK 222
           PG  G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG  G+ G PG 
Sbjct: 747 PGLFGLPGSDGER---GLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 803

Query: 223 DGL------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL            PG  G+ G  G  GE G+ G +G +G  G++G PG
Sbjct: 804 LGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPG 853



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 82/163 (50%), Gaps = 24/163 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+ G+ G  G+ GV+G RGE G  G  G PGP+G PG +G +G +G  G PG  G     
Sbjct: 1343 GEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAG---PS 1399

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------------- 219
            G+RG +G  G PG  G+ GR G  G  G DGIPGR+G  G                    
Sbjct: 1400 GRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRR 1459

Query: 220  --PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              PG  GLPG  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1460 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPG 1502



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 76/143 (53%), Gaps = 12/143 (8%)

Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GAKG MG+ G          +G KG PG  G PG QG PG EG  G K   GYPG QG P
Sbjct: 673 GAKGNMGLPGLSGNPGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAK---GYPGRQGFP 729

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G PG  G  G+ G PG +
Sbjct: 730 GPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLD 789

Query: 236 GTNGEKGMTGPRGNRGKSGINGV 258
           G  GE G+ GP G  G  G  G 
Sbjct: 790 GNPGEIGLPGPPGVLGLIGDTGA 812



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 81/146 (55%), Gaps = 6/146 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGD---EGKRGPKGD 165
            PG QG  G  G+ G  G  G +G  G  G PG  GPPG     G+PG     GKRG +G 
Sbjct: 1438 PGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGG 1497

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+
Sbjct: 1498 TGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGI 1557

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G  G+ G +G  G KG  G RG+ G
Sbjct: 1558 IGPPGMLGPSGLPGPKGDRGSRGDLG 1583



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 89/178 (50%), Gaps = 30/178 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPKGDM 166
            G +GP G+ G+ G  G  G +G +G  G  GVVG  GP+      GIPG +G+ G +GD 
Sbjct: 1385 GEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQ 1444

Query: 167  ---------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                                 G PG QG PG +G+ G  G +G PG+ G +G  GLP   
Sbjct: 1445 GNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQ 1504

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G PG
Sbjct: 1505 GEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPG 1562



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 94/192 (48%), Gaps = 24/192 (12%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G    T    P G  GP G KG +G  GE G+KG++GE+G PGV G PG QG  G  G  
Sbjct: 805 GLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLP 864

Query: 161 GPKGDMGYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G  G  G PGP G  GD+G           G  GD+G PG  G +G  G PG  GL G P
Sbjct: 865 GLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPP 924

Query: 212 GRNG---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G+ G               ++G PG+ G PG+ G+ G+ G  G+ G  GP G +G  G  
Sbjct: 925 GQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFI 984

Query: 257 GVPGTPAICAYK 268
           G+ G P I   K
Sbjct: 985 GLVGEPGIVGEK 996



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 85/173 (49%), Gaps = 33/173 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEM------------GVKGERGE---------------KGAPGV 144
            PG QG  G++G  GAKG +            G+ GE G                KG PG 
Sbjct: 1080 PGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGA 1139

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            VG PG   +PGD G +G  G +G PG QG+ G  G+ G +GD G    +G DG  G  G+
Sbjct: 1140 VGEPG---LPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGP---VGPDGLKGDRGD 1193

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG DG  G  G +G+ G+DG PG  GI G  G  G+ G  G +G RG  G  G
Sbjct: 1194 PGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKG 1246



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 81/166 (48%), Gaps = 18/166 (10%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G  G PG+ G PGP G          KG  G+PG  G PG++G
Sbjct: 659 QKGDPGLSPGQAHDGAKGNMGLPGLSGNPGPLGR---------KGHKGHPGAAGHPGEQG 709

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR G  G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 710 QPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 769

Query: 237 TNGEKGMTGPRGNRGKSGIN------GVPGTPAICAYKRESCSLLP 276
             G  G  G  G RG  G++      G+PG P +     ++ +L P
Sbjct: 770 EMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGP 815



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 85/190 (44%), Gaps = 42/190 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKG------DM 166
           GP G +G IG  G  G+ G  GE+G PGV G  G  G    PGD G+RGP G      ++
Sbjct: 736 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEI 795

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PGP G+ G  G  G  G +GYPG  G+ G  G  GEPGL G  G  G+ G+ G  G  
Sbjct: 796 GLPGPPGVLGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQ 855

Query: 227 GKDGI------------PGTNGTNGEKGM---------------------TGPRGNRGKS 253
           G  G             PG  G  G+KG                       GP G +GK 
Sbjct: 856 GDKGSHGLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 915

Query: 254 GINGVPGTPA 263
           G  G+PG P 
Sbjct: 916 GARGLPGPPG 925



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 94/255 (36%), Gaps = 82/255 (32%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+  +G      ++ P G  G  G +G+ G  GE G KG+ G KG  G  GPPG  G+PG
Sbjct: 1166 LIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPG 1225

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKGDMGYPGRIG 194
             EGK G +G+ G  G +G  G +G                      RG  G  G PGR+G
Sbjct: 1226 REGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMG 1285

Query: 195  LDGRDGL----------------------------------------------------P 202
              G  GL                                                    P
Sbjct: 1286 AQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEP 1345

Query: 203  GEPG---------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G+PG         L G PG+ G  G PG  G PG  G  G  G  G+ G  GP G RG  
Sbjct: 1346 GDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQ 1405

Query: 254  GINGVPGTPAICAYK 268
            G+ G+PG   +   +
Sbjct: 1406 GLQGLPGPRGVVGRQ 1420



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 84/187 (44%), Gaps = 36/187 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
            GL G  G KG  G +G  G  GE+G KG  G VGP G  G PG +G  G +G  G  G  
Sbjct: 1039 GLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFL 1098

Query: 171  ----------PQGIPGDEG------------KRGPKGDMGYPGRIGLDGRDGL------- 201
                       +G+PG+ G            + GPKG  G  G  GL G  G+       
Sbjct: 1099 GIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPL 1158

Query: 202  --PGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
              PGE GL    G PG  G  G  G DGL G  G PG +G +GEKG  G +G  G  G  
Sbjct: 1159 GPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPP 1218

Query: 257  GVPGTPA 263
            G+ G P 
Sbjct: 1219 GITGVPG 1225



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 92/235 (39%), Gaps = 85/235 (36%)

Query: 111  PPGLQGPIGQKGEIGAK---------------------GEMGVKGERGEKGAPGVVGPPG 149
            PPG QG IGQ+GE G +                     GE G KG+ G KG  G  GPPG
Sbjct: 1160 PPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPG 1219

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKGDMG 188
              G+PG EGK G +G+ G  G +G  G +G                      RG  G  G
Sbjct: 1220 ITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTG 1279

Query: 189  YPGRIGLDGRDGLPGEPGLDGI------------PGRNGMDGI----------------- 219
             PGR+G  G  GL G  G  GI             G  G DG                  
Sbjct: 1280 APGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDR 1339

Query: 220  -----PGKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPG 260
                 PG  G PG++G+ G  G  G+         +G  GP+G++G+ G  G PG
Sbjct: 1340 GDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPG 1394



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 85/181 (46%), Gaps = 30/181 (16%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            ++G  G++G +G +G  G  GP G QG  G +G+ GP+G  G PG QG  G+ G  G KG
Sbjct: 1037 SRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKG 1096

Query: 186  DMGYPGRIGLDGRDGLPGEPGLD------------------------GIPGRNGMD---- 217
             +G PG  G  G  GLPGEPG                          G+PG +GM     
Sbjct: 1097 FLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLG 1156

Query: 218  --GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              G PG+ GL G+ G PG  G +G  G  G +G+RG  G +G  G       K E  S  
Sbjct: 1157 PLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPG 1216

Query: 276  P 276
            P
Sbjct: 1217 P 1217



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 78/189 (41%), Gaps = 51/189 (26%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---------------GKRGPKGDMG 167
            +IG  G+ G +G +G+ GA G+ GPPG  G  GDE               G++G  G  G
Sbjct: 899  DIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPG 958

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI----------------- 210
              G +G PGD G+ GP G+ G  G IGL G  G+ GE G  G+                 
Sbjct: 959  LDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 1018

Query: 211  -------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                                G  GM G  G  G  G DG  G  G+ G KG  GPRG  G
Sbjct: 1019 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1078

Query: 252  KSGINGVPG 260
            + G  G  G
Sbjct: 1079 QPGQQGAAG 1087



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 53/100 (53%), Gaps = 18/100 (18%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G  G  G +GE G KG+    GE G PGV G  GP+G PGD      +G
Sbjct: 1485 QLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQG 1544

Query: 159  KRGPKGDMGYP---------GPQGIPGDEGKRGPKGDMGY 189
             RGP G MG           GP G+PG +G RG +GD+G 
Sbjct: 1545 PRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDLGL 1584



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 90/231 (38%), Gaps = 63/231 (27%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           I L  + G   S  E   PG+ G  G+ G  G  G+ G +G  G  G PG +G PGP G+
Sbjct: 744 IGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 803

Query: 154 PGDEGKRGPKGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-- 208
            G  G  G  G +GYPGP+G+ G     G+ G KGD G  G  G+ G  G  G+ G    
Sbjct: 804 LGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGL 863

Query: 209 -------------------------------------GIPGRNGMDGIPGKDGLPGKDGI 231
                                                G PG NG +G+ GK   PG  G+
Sbjct: 864 PGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGK---PGARGL 920

Query: 232 PGTNGTNGEKGMTGPRGN------------RGKSGINGVPGTPAICAYKRE 270
           PG        G  GP G+             G+ G  G PG P +   K E
Sbjct: 921 PGP------PGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGE 965



 Score = 46.6 bits (109), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 83/196 (42%), Gaps = 51/196 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVGPPG 149
            PPG  GP G KG+ GA+G  G                     ++G+ G KG PG  G  G
Sbjct: 902  PPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDG 961

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIG 194
             +G PGD G+ GP G+ G  G  G+ G+ G  G KGD               MG+PG  G
Sbjct: 962  SKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPG 1021

Query: 195  ------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDG---LPGKDGIPGTNGTNG 239
                          G  GLPG  G  G  G  G DG  G+ G   L G+ G  G  G  G
Sbjct: 1022 GIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPG 1081

Query: 240  EKGMTGPRGNRGKSGI 255
            ++G  G RG+ G  G 
Sbjct: 1082 QQGAAGERGHSGAKGF 1097


>gi|326667849|ref|XP_001343747.4| PREDICTED: collagen alpha-1(XXIV) chain [Danio rerio]
          Length = 1545

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 89/148 (60%), Gaps = 9/148 (6%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KG+IG +G +G +G +G +G  G+ G PGP+G PG  G RGP G+ G  GP+      GK
Sbjct: 517 KGDIGKEGPVGNRGLQGIEGPMGMTGDPGPKGFPGVTGNRGPDGEKGEEGPK------GK 570

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLPGKDGIPGTNGT 237
           +GP+G  G  G  G  G+ GL G PG+ G PG  G+ GI G+    G+ GK+G  G+ G 
Sbjct: 571 KGPRGAPGIMGPQGERGQSGLTGLPGVKGQPGAAGIQGIDGEVGPQGMLGKEGQKGSRGE 630

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G  G TG +G+RG++G +G PG P I 
Sbjct: 631 PGGNGRTGSKGSRGRAGQHGPPGIPGIV 658



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 89/182 (48%), Gaps = 24/182 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------VGPPGPQGIP 154
           G QGP G+KG  GA G  G  G  GE+G PG+                   G  G +G P
Sbjct: 722 GSQGPPGEKGYPGAIGLRGPPGHTGERGEPGIRGPLGPPGKRGPPGLAGPAGERGSRGPP 781

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI- 210
           G +G+ GP G  G PGP G+PG E   GK+GP G +G  G  G  G  GLPG PG  G+ 
Sbjct: 782 GRQGETGPTGFQGLPGPSGLPGAEGVTGKQGPPGSLGPQGSKGKQGPIGLPGSPGSSGMI 841

Query: 211 --PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G  G  G+PG  G PG  G+ G  G  G  G+ GP G++G  G  G  G P    ++
Sbjct: 842 GQTGEKGEQGVPGPAGDPGSVGLYGPQGHPGRVGLEGPTGSKGDVGSPGPKGKPGPNGFQ 901

Query: 269 RE 270
            E
Sbjct: 902 GE 903



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 92/172 (53%), Gaps = 6/172 (3%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +V ++G      +  PPG +G +G  G  G +G  G +G  G KG  G+ G PG   IPG
Sbjct: 327 VVILKGLPGDPGQSGPPGRRGDMGGMGPKGVRGRAGTQGRDGRKGLDGIRGSPG---IPG 383

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPG 212
            +G RG KGD   PG +G  G  G  GP+GD G  G+   +GL G +G+PG+PG  G PG
Sbjct: 384 LQGPRGYKGDTAPPGEKGEEGFLGAPGPRGDKGQTGQKGFVGLQGVEGIPGQPGPKGDPG 443

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            +G  G  G  G PG  G+ G  G NG +G  GP G  G+ G  G  GT  I
Sbjct: 444 HDGKRGPAGTVGAPGATGLVGAQGVNGSEGDAGPAGPIGRKGPQGPRGTDGI 495



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 97/215 (45%), Gaps = 66/215 (30%)

Query: 112 PGLQGPIGQKGE------------IGAKGEMGVKGERGEKG------APGVVGPPGPQGI 153
           PGLQGP G KG+            +GA G  G KG+ G+KG        G+ G PGP+G 
Sbjct: 382 PGLQGPRGYKGDTAPPGEKGEEGFLGAPGPRGDKGQTGQKGFVGLQGVEGIPGQPGPKGD 441

Query: 154 PGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP----- 202
           PG +GKRGP G +G P      G QG+ G EG  GP G +G  G  G  G DG+      
Sbjct: 442 PGHDGKRGPAGTVGAPGATGLVGAQGVNGSEGDAGPAGPIGRKGPQGPRGTDGIRGPPGQ 501

Query: 203 -------------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
                                    G  GL GI G  GM G PG  G PG  G  G +G 
Sbjct: 502 PGLQGLPGQGGPQGLKGDIGKEGPVGNRGLQGIEGPMGMTGDPGPKGFPGVTGNRGPDGE 561

Query: 238 NGEK------------GMTGPRGNRGKSGINGVPG 260
            GE+            G+ GP+G RG+SG+ G+PG
Sbjct: 562 KGEEGPKGKKGPRGAPGIMGPQGERGQSGLTGLPG 596



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 95/228 (41%), Gaps = 69/228 (30%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI-------------- 153
           E  P G+ G  GQKG  G  G  G  G +G +G  G  GPPG  GI              
Sbjct: 612 EVGPQGMLGKEGQKGSRGEPGGNGRTGSKGSRGRAGQHGPPGIPGIVVREFNWDYEVQLV 671

Query: 154 ----------------PGDEGKRGPKGDMGYPG---------PQGIPGDEGKRGPKGDMG 188
                           PGD+G  G +G +G PG         P G PG +G +GP G+ G
Sbjct: 672 LRDQKESLGVSGSVGNPGDKGPHGLRGVIGEPGKQGPSGSQGPPGRPGQDGSQGPPGEKG 731

Query: 189 YPGRIGLDGRDGLPGEPGLDGI---------------------------PGRNGMDGIPG 221
           YPG IGL G  G  GE G  GI                           PGR G  G  G
Sbjct: 732 YPGAIGLRGPPGHTGERGEPGIRGPLGPPGKRGPPGLAGPAGERGSRGPPGRQGETGPTG 791

Query: 222 KDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAICA 266
             GLPG  G+PG  G  G++   G  GP+G++GK G  G+PG+P    
Sbjct: 792 FQGLPGPSGLPGAEGVTGKQGPPGSLGPQGSKGKQGPIGLPGSPGSSG 839



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 91/207 (43%), Gaps = 42/207 (20%)

Query: 100 QGFCNSTKEYCP---PGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGI 153
           +GF   T    P    G +GP G+KG  GA G MG +GERG+ G    PGV G PG  GI
Sbjct: 547 KGFPGVTGNRGPDGEKGEEGPKGKKGPRGAPGIMGPQGERGQSGLTGLPGVKGQPGAAGI 606

Query: 154 PGDEGKRGP---------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG------------- 191
            G +G+ GP         KG  G PG  G  G +G RG  G  G PG             
Sbjct: 607 QGIDGEVGPQGMLGKEGQKGSRGEPGGNGRTGSKGSRGRAGQHGPPGIPGIVVREFNWDY 666

Query: 192 -----------RIGLDGRDGLPGEP---GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
                       +G+ G  G PG+    GL G+ G  G  G  G  G PG+ G  G+ G 
Sbjct: 667 EVQLVLRDQKESLGVSGSVGNPGDKGPHGLRGVIGEPGKQGPSGSQGPPGRPGQDGSQGP 726

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAI 264
            GEKG  G  G RG  G  G  G P I
Sbjct: 727 PGEKGYPGAIGLRGPPGHTGERGEPGI 753



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 75/158 (47%), Gaps = 24/158 (15%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ--- 172
            GP GQKG    KG  G  G  G +G  G  GP G +G  G +G++G +G+ G PG Q   
Sbjct: 1141 GPKGQKGNDARKGSSGKTGHAGRRGKAGKAGPRGLRGPKGHKGQQGAQGNTGPPGRQGQY 1200

Query: 173  GIPGDEGKRGPKGDMGYPGRI------------------GLDGRDGLPGEPGLDGIPGRN 214
            G+PG  G++G  G  G+ G                    GL G  G PG  G  G  G  
Sbjct: 1201 GLPGIRGQKGENGAKGFEGEKGDRGLLGPPGGDGLKGNRGLQGVKGRPGPKGEQGDIGPT 1260

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G P   GLPG  G+ G  G  G  G+TGP+G RG+
Sbjct: 1261 GQRGTP---GLPGMPGLFGEKGLKGYPGLTGPKGKRGR 1295



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 70/140 (50%), Gaps = 16/140 (11%)

Query: 76  QQNSTHNNPWVWLNAYSRIP----LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG 131
           +Q  T    +  L   S +P    +   QG   S       G QGPIG  G  G+ G +G
Sbjct: 783 RQGETGPTGFQGLPGPSGLPGAEGVTGKQGPPGSLGPQGSKGKQGPIGLPGSPGSSGMIG 842

Query: 132 VKGERGEKGAPGVVGPPG------PQGIPGDEGKRGP---KGDMGYPGPQGIPGD---EG 179
             GE+GE+G PG  G PG      PQG PG  G  GP   KGD+G PGP+G PG    +G
Sbjct: 843 QTGEKGEQGVPGPAGDPGSVGLYGPQGHPGRVGLEGPTGSKGDVGSPGPKGKPGPNGFQG 902

Query: 180 KRGPKGDMGYPGRIGLDGRD 199
           ++GP+G  G  G  G  G++
Sbjct: 903 EQGPQGSQGVLGAPGPRGKE 922



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 86/202 (42%), Gaps = 45/202 (22%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E   PG  G  G +G  G  G  G++G  G+ G  GVVGP GPQG+       GPKG   
Sbjct: 1022 ETGSPGPNGYPGDQGNQGLAGRRGLQGVMGKAGPLGVVGPKGPQGL------MGPKG--- 1072

Query: 168  YPGPQGIPGDEGKR------------GPKGDMGYPGRIGLDG------------------ 197
            +PG +G  G+ G+R            G  G  G+PG+ GL G                  
Sbjct: 1073 FPGQEGPKGEPGRRGPPGLKGPPGLTGNNGPSGFPGKEGLPGELGPDGPVGPPGPQGPKG 1132

Query: 198  ------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                  R+G  G+ G D   G +G  G  G+ G  GK G  G  G  G KG  G +GN G
Sbjct: 1133 KPGPQGRNGPKGQKGNDARKGSSGKTGHAGRRGKAGKAGPRGLRGPKGHKGQQGAQGNTG 1192

Query: 252  KSGINGVPGTPAICAYKRESCS 273
              G  G  G P I   K E+ +
Sbjct: 1193 PPGRQGQYGLPGIRGQKGENGA 1214



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 94/204 (46%), Gaps = 59/204 (28%)

Query: 113  GLQGPIGQKGEIGAKGEMG------VKGERGEKGAPGVVGPPGPQG---------IPGDE 157
            GL+GP G KG++G+ G  G       +GE+G +G+ GV+G PGP+G         I G++
Sbjct: 875  GLEGPTGSKGDVGSPGPKGKPGPNGFQGEQGPQGSQGVLGAPGPRGKEGGIGPPGITGNQ 934

Query: 158  GKRGPKGDMGYPGPQGIPGDE---------GKRGPKGDMGY-----------------PG 191
            G +G KGD   PG +G  G +         G+RG KG+ GY                  G
Sbjct: 935  GPKGQKGD---PGHRGFSGQQGPPGLLGDGGERGLKGNKGYLGSQVNDFAEFIGQNGLMG 991

Query: 192  RIGLDGRDGLPGEPGL---------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
            +IG  G  GL G  GL                G PG NG  G  G  GL G+ G+ G  G
Sbjct: 992  KIGPSGLMGLEGLMGLRGPPGANGPPGPKGETGSPGPNGYPGDQGNQGLAGRRGLQGVMG 1051

Query: 237  TNGEKGMTGPRGNRGKSGINGVPG 260
              G  G+ GP+G +G  G  G PG
Sbjct: 1052 KAGPLGVVGPKGPQGLMGPKGFPG 1075



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 69/134 (51%), Gaps = 24/134 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERG---------EKGAPGVVGPPGPQGIPGDEGKRGPK 163
            GL G IG  G +G +G MG++G  G         E G+PG  G PG QG  G  G+RG +
Sbjct: 988  GLMGKIGPSGLMGLEGLMGLRGPPGANGPPGPKGETGSPGPNGYPGDQGNQGLAGRRGLQ 1047

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------LDGIPGRN 214
            G MG  GP G+       GPKG  G  G  G  G++G  GEPG           G+ G N
Sbjct: 1048 GVMGKAGPLGV------VGPKGPQGLMGPKGFPGQEGPKGEPGRRGPPGLKGPPGLTGNN 1101

Query: 215  GMDGIPGKDGLPGK 228
            G  G PGK+GLPG+
Sbjct: 1102 GPSGFPGKEGLPGE 1115



 Score = 47.4 bits (111), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 80/205 (39%), Gaps = 57/205 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------------------PQ 151
            GLQG +G+ G +G  G  G +G  G KG PG  GP G                     P 
Sbjct: 1045 GLQGVMGKAGPLGVVGPKGPQGLMGPKGFPGQEGPKGEPGRRGPPGLKGPPGLTGNNGPS 1104

Query: 152  GIPGDEG---------------------------KRGPKGDMG---YPGPQGIPGDEGKR 181
            G PG EG                           + GPKG  G     G  G  G  G+R
Sbjct: 1105 GFPGKEGLPGELGPDGPVGPPGPQGPKGKPGPQGRNGPKGQKGNDARKGSSGKTGHAGRR 1164

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G  G  G  G  G  G  G  G  G  G PGR G  G+PG  G  G++G  G  G  G++
Sbjct: 1165 GKAGKAGPRGLRGPKGHKGQQGAQGNTGPPGRQGQYGLPGIRGQKGENGAKGFEGEKGDR 1224

Query: 242  ------GMTGPRGNRGKSGINGVPG 260
                  G  G +GNRG  G+ G PG
Sbjct: 1225 GLLGPPGGDGLKGNRGLQGVKGRPG 1249



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 85/232 (36%), Gaps = 66/232 (28%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV----------- 144
            L   +G      +  P G+ GP G +G +G KG     G+ G KG PG            
Sbjct: 1040 LAGRRGLQGVMGKAGPLGVVGPKGPQGLMGPKG---FPGQEGPKGEPGRRGPPGLKGPPG 1096

Query: 145  -VGPPGPQGIPGDEG---------------------------------------KRGPKG 164
              G  GP G PG EG                                       ++G  G
Sbjct: 1097 LTGNNGPSGFPGKEGLPGELGPDGPVGPPGPQGPKGKPGPQGRNGPKGQKGNDARKGSSG 1156

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
              G+ G +G  G  G RG +G  G+ G+ G  G  G PG  G  G+PG  G  G  G  G
Sbjct: 1157 KTGHAGRRGKAGKAGPRGLRGPKGHKGQQGAQGNTGPPGRQGQYGLPGIRGQKGENGAKG 1216

Query: 225  LPGKDG------------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G+ G            + G  G  G KG  GP+G +G  G  G  GTP +
Sbjct: 1217 FEGEKGDRGLLGPPGGDGLKGNRGLQGVKGRPGPKGEQGDIGPTGQRGTPGL 1268



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 87/183 (47%), Gaps = 35/183 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGV------------KGERGEKGAPGVVGPPGPQ---GIPGDE 157
            G QGP G +G +GA G  G             +G +G+KG PG  G  G Q   G+ GD 
Sbjct: 902  GEQGPQGSQGVLGAPGPRGKEGGIGPPGITGNQGPKGQKGDPGHRGFSGQQGPPGLLGDG 961

Query: 158  GKRGPKGDMGYPGPQ--------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------- 202
            G+RG KG+ GY G Q        G  G  GK GP G MG  G +GL G  G         
Sbjct: 962  GERGLKGNKGYLGSQVNDFAEFIGQNGLMGKIGPSGLMGLEGLMGLRGPPGANGPPGPKG 1021

Query: 203  --GEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G PG +G PG  G  G+ G+ GL    GK G  G  G  G +G+ GP+G  G+ G  G
Sbjct: 1022 ETGSPGPNGYPGDQGNQGLAGRRGLQGVMGKAGPLGVVGPKGPQGLMGPKGFPGQEGPKG 1081

Query: 258  VPG 260
             PG
Sbjct: 1082 EPG 1084



 Score = 40.0 bits (92), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 84/213 (39%), Gaps = 67/213 (31%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------------------------- 149
            G +G IG KG+ G +G +G  G  G+ GPPG                            
Sbjct: 225 AGNRGYIGYKGDKGSQGVQGMDGLRGIQGPPGPPGLPALYLWRNTDEDWAAFRRTPYYQL 284

Query: 150 -PQGIPGDEGKRGPKGDMGYPG-----------------------PQGIPGDEGKRGP-- 183
              G P + G+ GP G+ G PG                        +G+PGD G+ GP  
Sbjct: 285 LAAGWPRETGQPGPMGETGRPGLPVSLLDIIQNTYSEACSEFVVILKGLPGDPGQSGPPG 344

Query: 184 -------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
                        +G  G  GR G  G DG+ G PG+ G+ G  G  G     G  G++G
Sbjct: 345 RRGDMGGMGPKGVRGRAGTQGRDGRKGLDGIRGSPGIPGLQGPRGYKGDTAPPGEKGEEG 404

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G+KG TG +G  G  G+ G+PG P 
Sbjct: 405 FLGAPGPRGDKGQTGQKGFVGLQGVEGIPGQPG 437


>gi|119889929|ref|XP_609742.3| PREDICTED: collagen alpha-1(XXIV) chain [Bos taurus]
          Length = 1691

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 89/183 (48%), Gaps = 27/183 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGLQGP G  G+ G  GE G +G +G+ G PG +G  GP G  G+ G +G  G  G  GP
Sbjct: 951  PGLQGPPGSTGDRGLTGEPGPRGPQGDAGPPGEMGAEGPPGTEGESGLQGEPGTKGDVGP 1010

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG---------------- 215
             G  G  G+ G +G+ G PG  GL G+DGL G PG  G+PG +G                
Sbjct: 1011 VGSVGAAGEPGLRGEPGAPGEEGLQGKDGLKGNPGGRGLPGEDGEKGETGLPGTTGPLGG 1070

Query: 216  -----------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                       + GIPG+ G PGK G  G  G  GE G  G  G  G+SG+ G  GT   
Sbjct: 1071 PGLMGPPGPEGITGIPGQRGRPGKKGDKGQMGPAGEIGSRGAPGQFGESGLKGARGTRGA 1130

Query: 265  CAY 267
              +
Sbjct: 1131 VGH 1133



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/194 (41%), Positives = 98/194 (50%), Gaps = 40/194 (20%)

Query: 112  PGLQGPIGQKGEIGAKGE----------------MGVKGERGEKGAPGV---VGPPGPQG 152
            PGL G  G KGE G  GE                 G +GERGE GA G    VG PGP+G
Sbjct: 1155 PGLSGLPGPKGEKGYPGEDNTILGPPGPRGEPGPRGEQGERGEPGAEGYKGHVGIPGPRG 1214

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                 G++GP G+ G  G QG+ G+ G  GPKG  G PG  G  G  GLPG PG  G+ G
Sbjct: 1215 A---TGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGAPGPSGKPGIPGLPGLPGPKGMQG 1271

Query: 213  RNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNR------------GKSG 254
             +G +GI   PGK GLPGK G+PG  G+ G  G+T   GP+G +            G  G
Sbjct: 1272 YHGAEGISGNPGKIGLPGKHGLPGIRGSPGRIGLTGSLGPQGAKGSSGPPGSPGVQGPKG 1331

Query: 255  INGVPGTPAICAYK 268
              G+PG P I   +
Sbjct: 1332 EQGLPGQPGIPGKR 1345



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 87/154 (56%), Gaps = 24/154 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGP---QG 152
            P G  GP+G++G  G KGE G +G               ERG +G PG+ GPPG    +G
Sbjct: 905  PRGPDGPLGEQGIQGTKGETGDQGKRGPRGLIGKTGNPGERGVQGKPGLQGPPGSTGDRG 964

Query: 153  IPGDEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            + G+ G RGP+GD G PG    +G PG EG+ G +G+ G  G +G  G  G  GEPGL G
Sbjct: 965  LTGEPGPRGPQGDAGPPGEMGAEGPPGTEGESGLQGEPGTKGDVGPVGSVGAAGEPGLRG 1024

Query: 210  IPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGE 240
             PG  G +G+ GKDGL   PG  G+PG +G  GE
Sbjct: 1025 EPGAPGEEGLQGKDGLKGNPGGRGLPGEDGEKGE 1058



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 92/186 (49%), Gaps = 42/186 (22%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            QG  G+ G  G KG +G+ G RG   ++G PG  G  G QG+ G+ G  GPKG  G PGP
Sbjct: 1192 QGERGEPGAEGYKGHVGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGAPGP 1251

Query: 172  QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGM--- 216
             G   IPG  G  GPKG  GY         PG+IGL G+ GLPG   + G PGR G+   
Sbjct: 1252 SGKPGIPGLPGLPGPKGMQGYHGAEGISGNPGKIGLPGKHGLPG---IRGSPGRIGLTGS 1308

Query: 217  ------------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                               G  G+ GLPG+ GIPG  G  G +G  GP    G+SGI G 
Sbjct: 1309 LGPQGAKGSSGPPGSPGVQGPKGEQGLPGQPGIPGKRGHQGAQGDQGP---CGESGIKGQ 1365

Query: 259  PGTPAI 264
            PG   I
Sbjct: 1366 PGEHGI 1371



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 91/184 (49%), Gaps = 33/184 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------VVGP---PGPQGI- 153
           GL GP G +G  G KG  G+ G +GE+G PG               + GP   PGP+G+ 
Sbjct: 535 GLMGPPGMQGVKGLKGHPGLPGLQGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVR 594

Query: 154 -----PGDEGKRGPKGDMGYPG---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                PG+ G+ GP+G+ G PG          QG PGD G RGP G  G PG IG  G  
Sbjct: 595 GFIGSPGEVGQLGPEGERGVPGIRGKRGLKGRQGFPGDFGDRGPAGPDGSPGLIGSTGPP 654

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G PG  G  G  G  G  GIPG  GL G  G+PG  G  GE+G+ G +G  G +G  G  
Sbjct: 655 GFPGLRGSVGPVGPIGPSGIPGPMGLSGNKGLPGIKGDKGEQGIAGEQGETGYTGDKGAV 714

Query: 260 GTPA 263
           G P 
Sbjct: 715 GFPG 718



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 86/165 (52%), Gaps = 21/165 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G KG+ G   +  + GE+G++G  G++GPPG QG+      +G KG  G PG 
Sbjct: 504 PGLPGPKGPKGDPGFSPDQALSGEKGDQGLSGLMGPPGMQGV------KGLKGHPGLPGL 557

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------------PGRNGMDGI 219
           QG  G  G  G  G  GYPGR GL G DG PG  G+ G              G  G+ GI
Sbjct: 558 QGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVRGFIGSPGEVGQLGPEGERGVPGI 617

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            GK GL G+ G P   G  G++G  GP G+ G  G  G PG P +
Sbjct: 618 RGKRGLKGRQGFP---GDFGDRGPAGPDGSPGLIGSTGPPGFPGL 659



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 18/175 (10%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G++GE GA+G  G  G  G +GA G  GPPG    PGD+G++G KG+ G  GP+G    +
Sbjct: 1193 GERGEPGAEGYKGHVGIPGPRGATGQQGPPGE---PGDQGEQGLKGERGSEGPKG---KK 1246

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GP G  G PG  GL G  G+ G  G +GI G  G  G+PGK GLPG  G PG  G  
Sbjct: 1247 GAPGPSGKPGIPGLPGLPGPKGMQGYHGAEGISGNPGKIGLPGKHGLPGIRGSPGRIGLT 1306

Query: 239  GEKGMTGPR------------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
            G  G  G +            G +G+ G+ G PG P    ++       P  E+ 
Sbjct: 1307 GSLGPQGAKGSSGPPGSPGVQGPKGEQGLPGQPGIPGKRGHQGAQGDQGPCGESG 1361



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 93/192 (48%), Gaps = 30/192 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G KG++G  G  G  G PG+ G PG    PG+EG +G  G  G PG
Sbjct: 989  PPGTEGESGLQGEPGTKGDVGPVGSVGAAGEPGLRGEPG---APGEEGLQGKDGLKGNPG 1045

Query: 171  PQGIPGDEGKRGPK---------------------------GDMGYPGRIGLDGRDGLPG 203
             +G+PG++G++G                             G  G PG+ G  G+ G  G
Sbjct: 1046 GRGLPGEDGEKGETGLPGTTGPLGGPGLMGPPGPEGITGIPGQRGRPGKKGDKGQMGPAG 1105

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            E G  G PG+ G  G+ G  G  G  G  G  G  GE G+ G RG+ G+ G++G+PG   
Sbjct: 1106 EIGSRGAPGQFGESGLKGARGTRGAVGHLGLMGPAGEPGILGYRGHEGQPGLSGLPGPKG 1165

Query: 264  ICAYKRESCSLL 275
               Y  E  ++L
Sbjct: 1166 EKGYPGEDNTIL 1177



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 94/202 (46%), Gaps = 54/202 (26%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGE------------MGVKGERGEKGAPGVVGPPGPQ---- 151
            E  P GL+G +G +G IG  GE             G  GE+GE+G+PG VGP G +    
Sbjct: 809  EPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGVTGSIGEKGERGSPGPVGPQGEKGAMG 868

Query: 152  --------------GIPGDEGKR------------------GPKGDMGYPGPQGIPGDEG 179
                          G+PG  G R                  GP G+ G  G +G  GD+G
Sbjct: 869  YPGPPGVPGPMGALGLPGHVGARGPPGIPGPKGRRGPRGPDGPLGEQGIQGTKGETGDQG 928

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            KRGP+G +   G+ G  G  G+ G+PGL G PG  G  G+ G+   PG  G  G  G  G
Sbjct: 929  KRGPRGLI---GKTGNPGERGVQGKPGLQGPPGSTGDRGLTGE---PGPRGPQGDAGPPG 982

Query: 240  EKGMTGPRGNRGKSGINGVPGT 261
            E G  GP G  G+SG+ G PGT
Sbjct: 983  EMGAEGPPGTEGESGLQGEPGT 1004



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/134 (44%), Positives = 72/134 (53%), Gaps = 6/134 (4%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           +G  G+ G  G  G PG+ GP GP+G PG   D+   G KGD G  G  G PG +G +G 
Sbjct: 489 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPDQALSGEKGDQGLSGLMGPPGMQGVKGL 548

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           K   G+PG  GL G  G+PG  G  G  G  G  G+ G DG PG  G+ G  G+ GE G 
Sbjct: 549 K---GHPGLPGLQGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVRGFIGSPGEVGQ 605

Query: 244 TGPRGNRGKSGING 257
            GP G RG  GI G
Sbjct: 606 LGPEGERGVPGIRG 619



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 98/223 (43%), Gaps = 48/223 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG---Y 168
           PG++G  G KG  G  G+ G +G  G  G+PG++G  GP G PG  G  GP G +G    
Sbjct: 615 PGIRGKRGLKGRQGFPGDFGDRGPAGPDGSPGLIGSTGPPGFPGLRGSVGPVGPIGPSGI 674

Query: 169 PGPQG---------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD-- 217
           PGP G         I GD+G++G  G+ G  G  G  G  G PG PG+ G PG +G    
Sbjct: 675 PGPMGLSGNKGLPGIKGDKGEQGIAGEQGETGYTGDKGAVGFPGPPGMRGKPGPSGQTGD 734

Query: 218 -------------------GIPGKDGLPGKDGI---------PGTNGTNGEKGMT----- 244
                              GIPG++G  G  G          PG  GT GE+G T     
Sbjct: 735 PGPQGPSGPPGPEGFPGDIGIPGQNGPEGSKGFIGNRGPSGPPGLKGTQGEEGPTGSFGE 794

Query: 245 -GPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
            GPRG  G  G  G PG   +     +  ++    ET  + +P
Sbjct: 795 LGPRGKPGPKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLP 837



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 97/209 (46%), Gaps = 51/209 (24%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +GF  +     PPGL+G  G++G  G+ GE+G +G+ G K   G  G PGP+G+ G+ G 
Sbjct: 765 KGFIGNRGPSGPPGLKGTQGEEGPTGSFGELGPRGKPGPK---GYAGEPGPEGLKGEVGD 821

Query: 160 RGPKGDMGYPGPQGIP---------GDEGKR------GPKGD------------------ 186
           +G  G +G  GP G+P         G++G+R      GP+G+                  
Sbjct: 822 QGNIGKIGETGPVGLPGEVGVTGSIGEKGERGSPGPVGPQGEKGAMGYPGPPGVPGPMGA 881

Query: 187 MGYPGRIGL---------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G PG +G                 G DG  GE G+ G  G  G  G  G  GL GK G 
Sbjct: 882 LGLPGHVGARGPPGIPGPKGRRGPRGPDGPLGEQGIQGTKGETGDQGKRGPRGLIGKTGN 941

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G  G+ G+ GP G+ G  G+ G PG
Sbjct: 942 PGERGVQGKPGLQGPPGSTGDRGLTGEPG 970



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 98/233 (42%), Gaps = 69/233 (29%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGA------------ 141
            V  QG      E  P GL G +G  G IG KGE G  G    +GEKGA            
Sbjct: 819  VGDQGNIGKIGETGPVGLPGEVGVTGSIGEKGERGSPGPVGPQGEKGAMGYPGPPGVPGP 878

Query: 142  ------PGVVG---------------------PPGPQGIP------GDEGKRGPKGDM-- 166
                  PG VG                     P G QGI       GD+GKRGP+G +  
Sbjct: 879  MGALGLPGHVGARGPPGIPGPKGRRGPRGPDGPLGEQGIQGTKGETGDQGKRGPRGLIGK 938

Query: 167  ----------GYPGPQGIP---------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                      G PG QG P         G+ G RGP+GD G PG +G +G  G  GE GL
Sbjct: 939  TGNPGERGVQGKPGLQGPPGSTGDRGLTGEPGPRGPQGDAGPPGEMGAEGPPGTEGESGL 998

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG  G  G  G  G  G+ G+ G  G  GE+G+ G  G +G  G  G+PG
Sbjct: 999  QGEPGTKGDVGPVGSVGAAGEPGLRGEPGAPGEEGLQGKDGLKGNPGGRGLPG 1051



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 82/174 (47%), Gaps = 28/174 (16%)

Query: 119  GQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGD---M 166
            GQ+G  G    KG+MG  GE G +GAPG  G  G +G  G  G        GP G+   +
Sbjct: 1087 GQRGRPGKKGDKGQMGPAGEIGSRGAPGQFGESGLKGARGTRGAVGHLGLMGPAGEPGIL 1146

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGR----------------IGLDGRDGLPGEPGLDGI 210
            GY G +G PG  G  GPKG+ GYPG                  G  G  G PG  G  G 
Sbjct: 1147 GYRGHEGQPGLSGLPGPKGEKGYPGEDNTILGPPGPRGEPGPRGEQGERGEPGAEGYKGH 1206

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  G  G+ G PG+ G  G  G  GE+G  GP+G +G  G +G PG P +
Sbjct: 1207 VGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGKKGAPGPSGKPGIPGL 1260



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 86/178 (48%), Gaps = 21/178 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGK--------- 159
            PGL GP G +G  GA+G  G  G+    G+ G PG+ G PG  G+ G  G          
Sbjct: 1261 PGLPGPKGMQGYHGAEGISGNPGKIGLPGKHGLPGIRGSPGRIGLTGSLGPQGAKGSSGP 1320

Query: 160  ------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                  +GPKG+ G PG  GIPG  G +G +GD G  G  G+ G+   PGE G+ G+ G 
Sbjct: 1321 PGSPGVQGPKGEQGLPGQPGIPGKRGHQGAQGDQGPCGESGIKGQ---PGEHGIQGLMGF 1377

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             G  G  G  G  G  GI G  G  G++G TGP G  G  G  G  G      ++ E+
Sbjct: 1378 QGFPGPKGPQGDAGIVGISGPKGPVGQRGNTGPFGREGIIGPTGRTGPRGEKGFRGET 1435



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 98/237 (41%), Gaps = 58/237 (24%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------- 143
            G   S      PGL+G  G  GE G +G+ G+KG  G +G PG                 
Sbjct: 1009 GPVGSVGAAGEPGLRGEPGAPGEEGLQGKDGLKGNPGGRGLPGEDGEKGETGLPGTTGPL 1068

Query: 144  -------------VVGPPGPQGIP---GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
                         + G PG +G P   GD+G+ GP G++G  G  G  G+ G +G +G  
Sbjct: 1069 GGPGLMGPPGPEGITGIPGQRGRPGKKGDKGQMGPAGEIGSRGAPGQFGESGLKGARGTR 1128

Query: 188  GYPGRIGLDGRDGLP---------GEPGLDGIPGRNGMDGIPGKD--------------- 223
            G  G +GL G  G P         G+PGL G+PG  G  G PG+D               
Sbjct: 1129 GAVGHLGLMGPAGEPGILGYRGHEGQPGLSGLPGPKGEKGYPGEDNTILGPPGPRGEPGP 1188

Query: 224  -GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
             G  G+ G PG  G  G  G+ GPRG  G+ G  G PG       K E  S  P  +
Sbjct: 1189 RGEQGERGEPGAEGYKGHVGIPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGPKGK 1245



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 92/230 (40%), Gaps = 81/230 (35%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V + G   +T +  PPG  G    +GE G KGE G +G +G+KGAPG  G PG   IPG 
Sbjct: 1207 VGIPGPRGATGQQGPPGEPG---DQGEQGLKGERGSEGPKGKKGAPGPSGKPG---IPGL 1260

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGK------------------------------------ 180
             G  GPKG  GY G +GI G+ GK                                    
Sbjct: 1261 PGLPGPKGMQGYHGAEGISGNPGKIGLPGKHGLPGIRGSPGRIGLTGSLGPQGAKGSSGP 1320

Query: 181  ------RGPKGDMGYPGRIGLDGR---------------DGLPGEPGLDGIPGRNGMDGI 219
                  +GPKG+ G PG+ G+ G+                G+ G+PG  GI G  G  G 
Sbjct: 1321 PGSPGVQGPKGEQGLPGQPGIPGKRGHQGAQGDQGPCGESGIKGQPGEHGIQGLMGFQGF 1380

Query: 220  PGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRG 251
            PG  G  G  GI G +G  G                    G TGPRG +G
Sbjct: 1381 PGPKGPQGDAGIVGISGPKGPVGQRGNTGPFGREGIIGPTGRTGPRGEKG 1430



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 79/158 (50%), Gaps = 12/158 (7%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGI------PGDEGKRGP 162
           +GP G  G  G  G  G+ G +G KG PG      + G  G QG+      PG +G +G 
Sbjct: 489 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPDQALSGEKGDQGLSGLMGPPGMQGVKGL 548

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG  G PG QG  G  G  G  G  GYPGR GL G DG PG  G+ G  G  G  G  G 
Sbjct: 549 KGHPGLPGLQGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVRGFIGSPGEVGQLGP 608

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G  G  GI G  G  G +G  G  G+RG +G +G PG
Sbjct: 609 EGERGVPGIRGKRGLKGRQGFPGDFGDRGPAGPDGSPG 646



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 9/114 (7%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPG 212
           KRGP+G  G  G  G+PG  G +GPKGD G+       G  G  G  GL G PG+ G+ G
Sbjct: 488 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPDQALSGEKGDQGLSGLMGPPGMQGVKG 547

Query: 213 RNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G+P   G+ G+PG  G  G+ G  G +G+ GP GN G  G+ G  G+P 
Sbjct: 548 LKGHPGLPGLQGEQGIPGFTGNIGSRGYPGRQGLAGPDGNPGPKGVRGFIGSPG 601



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 80/178 (44%), Gaps = 36/178 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGPPGPQG-------------- 152
           GL G  G KGE G  GE G  G  G+KGA      PG+ G PGP G              
Sbjct: 685 GLPGIKGDKGEQGIAGEQGETGYTGDKGAVGFPGPPGMRGKPGPSGQTGDPGPQGPSGPP 744

Query: 153 ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                     IPG  G  G KG +G  GP G PG +G +G +G  G  G +G  G+   P
Sbjct: 745 GPEGFPGDIGIPGQNGPEGSKGFIGNRGPSGPPGLKGTQGEEGPTGSFGELGPRGK---P 801

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G PG  G+ G  G  G  GK G  G  G  GE G+TG  G +G+    G PG
Sbjct: 802 GPKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGVTGSIGEKGE---RGSPG 856



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 83/203 (40%), Gaps = 63/203 (31%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI--- 174
           IG  G+ G +G  G  G RG  G PG+ G  G +G  G  G+ GP+G    PGP+G    
Sbjct: 753 IGIPGQNGPEGSKGFIGNRGPSGPPGLKGTQGEEGPTGSFGELGPRGK---PGPKGYAGE 809

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-------------- 220
           PG EG +G  GD G  G+IG  G  GLPGE G+ G  G  G  G P              
Sbjct: 810 PGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGVTGSIGEKGERGSPGPVGPQGEKGAMGY 869

Query: 221 -------------------------------------GKDGLPGKDGIPGTNGTNGEKGM 243
                                                G DG  G+ GI GT G  G++G 
Sbjct: 870 PGPPGVPGPMGALGLPGHVGARGPPGIPGPKGRRGPRGPDGPLGEQGIQGTKGETGDQGK 929

Query: 244 TGPR------GNRGKSGINGVPG 260
            GPR      GN G+ G+ G PG
Sbjct: 930 RGPRGLIGKTGNPGERGVQGKPG 952


>gi|344286326|ref|XP_003414910.1| PREDICTED: collagen alpha-6(IV) chain [Loxodonta africana]
          Length = 1740

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/189 (42%), Positives = 100/189 (52%), Gaps = 10/189 (5%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            LV   G   S      PGL+G  G  G  G  GE G++G  G  G PGV G PG +G PG
Sbjct: 1062 LVGRPGPSGSLGLRGLPGLKGAPGITGFPGMPGETGIRGLNGAPGLPGVAGLPGSKGDPG 1121

Query: 156  DE----GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                  G  GPKG    PG +G  G +GK GP GD+G+PG  G DG+DG+PG+ GL G P
Sbjct: 1122 QSLEIPGTPGPKGQ---PGERGFKGIKGKDGPIGDVGFPGNKGEDGKDGVPGDIGLPGSP 1178

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS---GINGVPGTPAICAYK 268
            G  G+ G+ G  GLPG  G  G  G  G  G+ GP+G  G S   G+NG+PGT       
Sbjct: 1179 GFPGIAGLRGDPGLPGSPGHAGVTGPLGHPGLVGPKGFPGLSGLHGLNGLPGTKGAHGTP 1238

Query: 269  RESCSLLPN 277
              S + +P 
Sbjct: 1239 GPSITGVPG 1247



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 95/174 (54%), Gaps = 15/174 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----VVGPPGPQGIPGD------EGKRG 161
            PG+ G  G +G  GA G  GV G  G KG PG    + G PGP+G PG+      +GK G
Sbjct: 1090 PGMPGETGIRGLNGAPGLPGVAGLPGSKGDPGQSLEIPGTPGPKGQPGERGFKGIKGKDG 1149

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            P GD+G+PG +G   ++GK G  GD+G PG  G  G  GL G+PGL G PG  G+ G  G
Sbjct: 1150 PIGDVGFPGNKG---EDGKDGVPGDIGLPGSPGFPGIAGLRGDPGLPGSPGHAGVTGPLG 1206

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG--INGVPGTPAICAYKRESCS 273
              GL G  G PG +G +G  G+ G +G  G  G  I GVPG   +   K E  S
Sbjct: 1207 HPGLVGPKGFPGLSGLHGLNGLPGTKGAHGTPGPSITGVPGPAGLPGPKGEKGS 1260



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 91/181 (50%), Gaps = 37/181 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP-------GDEGKRGPKGD 165
            GL+G  G  G IG  G  G  GE+G++G PG VG PGP+ +P       GD+G RG  G 
Sbjct: 970  GLKGIPGSPGRIGTSGPAGSPGEKGDRGNPGPVGIPGPR-LPMLNLWFKGDKGSRGSAGS 1028

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPG----------------RIGLDGRDGLPGEPGLDG 209
             G+PGP+G  G+ G+ GP G  G PG                 +GL G  GL G PG+ G
Sbjct: 1029 DGFPGPRGDKGEAGRPGPTGLPGVPGLASSIKGLVGRPGPSGSLGLRGLPGLKGAPGITG 1088

Query: 210  IPGR---------NGMDGIPGKDGLPGKDGIPGTN----GTNGEKGMTGPRGNRGKSGIN 256
             PG          NG  G+PG  GLPG  G PG +    GT G KG  G RG +G  G +
Sbjct: 1089 FPGMPGETGIRGLNGAPGLPGVAGLPGSKGDPGQSLEIPGTPGPKGQPGERGFKGIKGKD 1148

Query: 257  G 257
            G
Sbjct: 1149 G 1149



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 90/176 (51%), Gaps = 27/176 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE------------------RGEKGAPGVVGPPGPQGI 153
            PG +G +G+ G +GAKGE G  G                   +G+ G PG VG PG  G 
Sbjct: 831  PGPKGLLGKSGMLGAKGERGSPGAPGHTGKPGPRGPGGLSGIKGKPGLPGTVGFPGLAGR 890

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP-------- 205
            PG +G RG  G  G  G +G+PG +G  G  G +G+ G  GL G  GLPG P        
Sbjct: 891  PGKKGSRGEAGHPGSTGKRGLPGLKGLPGSAGLIGFLGSSGLPGATGLPGLPGPKGEKGS 950

Query: 206  -GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             GL G PG  G+ GIPG  GL G  G PG  GT+G  G  G +G+RG  G  G+PG
Sbjct: 951  VGLIGFPGIPGLPGIPGASGLKGIPGSPGRIGTSGPAGSPGEKGDRGNPGPVGIPG 1006



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 88/176 (50%), Gaps = 21/176 (11%)

Query: 112  PGLQGPIGQKGEI---------GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PGL GP G+KG +         G  G  G  G +G  G+PG +G  GP G PG++G RG 
Sbjct: 939  PGLPGPKGEKGSVGLIGFPGIPGLPGIPGASGLKGIPGSPGRIGTSGPAGSPGEKGDRGN 998

Query: 163  KGDMGYPGPQGIP-------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR-- 213
             G +G PGP+ +P       GD+G RG  G  G+PG  G  G  G PG  GL G+PG   
Sbjct: 999  PGPVGIPGPR-LPMLNLWFKGDKGSRGSAGSDGFPGPRGDKGEAGRPGPTGLPGVPGLAS 1057

Query: 214  --NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
               G+ G PG  G  G  G+PG  G  G  G  G  G  G  G+NG PG P +   
Sbjct: 1058 SIKGLVGRPGPSGSLGLRGLPGLKGAPGITGFPGMPGETGIRGLNGAPGLPGVAGL 1113



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 87/186 (46%), Gaps = 41/186 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------GPQGIPGDEGKRGPKGDM 166
           GL G  G +G  G KG  G+ G++G  G PG+  P       GP G+PG  G  GPKG  
Sbjct: 671 GLPGSPGPRGLPGDKGIDGLPGQQGLPGPPGITLPCIITGLYGPSGLPGAPGVPGPKGIR 730

Query: 167 GYPGPQGIPGDEGKRG------------------PKGDMGYPGRIGLDGRDGLPGE---- 204
           GYPG  G PG  G +G                  P+G+ G PG  GL G+DGLPG     
Sbjct: 731 GYPGTPGQPGVRGAKGEPGSAGLVRLPELPGFPGPRGEKGLPGFPGLPGKDGLPGNVGSP 790

Query: 205 --PGL-----------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             PG            +G PG  G+ G+PG  G PG  G PG  G  G+ GM G +G RG
Sbjct: 791 GLPGPKGAPGDIFGAENGAPGEQGLQGLPGDRGFPGDSGFPGPKGLLGKSGMLGAKGERG 850

Query: 252 KSGING 257
             G  G
Sbjct: 851 SPGAPG 856



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 87/174 (50%), Gaps = 17/174 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD-----EGKRGPKGDM 166
           PG  GP G+KG  G  G  G  G  G  G+PG+   PGP+G PGD      G  G +G  
Sbjct: 760 PGFPGPRGEKGLPGFPGLPGKDGLPGNVGSPGL---PGPKGAPGDIFGAENGAPGEQGLQ 816

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR---------NGMD 217
           G PG +G PGD G  GPKG +G  G +G  G  G PG PG  G PG           G  
Sbjct: 817 GLPGDRGFPGDSGFPGPKGLLGKSGMLGAKGERGSPGAPGHTGKPGPRGPGGLSGIKGKP 876

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G+PG  G PG  G PG  G+ GE G  G  G RG  G+ G+PG+  +  +   S
Sbjct: 877 GLPGTVGFPGLAGRPGKKGSRGEAGHPGSTGKRGLPGLKGLPGSAGLIGFLGSS 930



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 94/193 (48%), Gaps = 44/193 (22%)

Query: 112 PGLQGPIGQKGEI-----GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           PGL GP G  G+I     GA GE G++G  G++G PG  G PGP+G+ G  G  G KG+ 
Sbjct: 790 PGLPGPKGAPGDIFGAENGAPGEQGLQGLPGDRGFPGDSGFPGPKGLLGKSGMLGAKGER 849

Query: 167 GYPGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGE------- 204
           G PG    PG                +GK G  G +G+PG  G  G+ G  GE       
Sbjct: 850 GSPG---APGHTGKPGPRGPGGLSGIKGKPGLPGTVGFPGLAGRPGKKGSRGEAGHPGST 906

Query: 205 -----PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG---------MTGPRGNR 250
                PGL G+PG  G+ G  G  GLPG  G+PG  G  GEKG         + G  G  
Sbjct: 907 GKRGLPGLKGLPGSAGLIGFLGSSGLPGATGLPGLPGPKGEKGSVGLIGFPGIPGLPGIP 966

Query: 251 GKSGINGVPGTPA 263
           G SG+ G+PG+P 
Sbjct: 967 GASGLKGIPGSPG 979



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 86/185 (46%), Gaps = 46/185 (24%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGV--VGPPGPQGIPGDEGKRGPKGDMGYPGPQGI----- 174
           GE G  G  G KG+ G  G PG+   G PGP+G+PGD+G  G  G  G PGP GI     
Sbjct: 648 GEKGFAGLPGRKGQHGLTGLPGIGLPGSPGPRGLPGDKGIDGLPGQQGLPGPPGITLPCI 707

Query: 175 ----------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------LDGIPGRNG 215
                     PG  G  GPKG  GYPG  G  G  G  GEPG         L G PG  G
Sbjct: 708 ITGLYGPSGLPGAPGVPGPKGIRGYPGTPGQPGVRGAKGEPGSAGLVRLPELPGFPGPRG 767

Query: 216 ------MDGIPGKDGLPGKDGIPG--------------TNGTNGEKGMTGPRGNRGKSGI 255
                   G+PGKDGLPG  G PG               NG  GE+G+ G  G+RG  G 
Sbjct: 768 EKGLPGFPGLPGKDGLPGNVGSPGLPGPKGAPGDIFGAENGAPGEQGLQGLPGDRGFPGD 827

Query: 256 NGVPG 260
           +G PG
Sbjct: 828 SGFPG 832



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 90/182 (49%), Gaps = 27/182 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G +G  G  G  G+ G +GE G  G+ G  G PG +G+PG  G  G  G  G PG 
Sbjct: 876  PGLPGTVGFPGLAGRPGKKGSRGEAGHPGSTGKRGLPGLKGLPGSAGLIGFLGSSGLPGA 935

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-- 229
             G+PG  G +G KG +G  G  G+ G  G+PG  GL GIPG  G  G  G  G PG+   
Sbjct: 936  TGLPGLPGPKGEKGSVGLIGFPGIPGLPGIPGASGLKGIPGSPGRIGTSGPAGSPGEKGD 995

Query: 230  -------GIP---------------GTNGTNGEKGMTGPRGNRGKS---GINGVPGTPAI 264
                   GIP               G+ G+ G  G  GPRG++G++   G  G+PG P +
Sbjct: 996  RGNPGPVGIPGPRLPMLNLWFKGDKGSRGSAGSDGFPGPRGDKGEAGRPGPTGLPGVPGL 1055

Query: 265  CA 266
             +
Sbjct: 1056 AS 1057



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 89/193 (46%), Gaps = 51/193 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ--GIPGDEGKRGPKGDMG 167
            G+ GP+G  G +G KG  G+ G  G  G PG  G    PGP   G+PG  G  GPKG+ G
Sbjct: 1200 GVTGPLGHPGLVGPKGFPGLSGLHGLNGLPGTKGAHGTPGPSITGVPGPAGLPGPKGEKG 1259

Query: 168  YPGPQ-GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------GIPGRNGMD 217
             PG   G PG  G RG KG  G+PG   + G  GLPG PG+          G PGR G+D
Sbjct: 1260 SPGIGIGAPGKPGVRGQKGGRGFPG---VQGPAGLPGAPGISLPSVIAGQPGDPGRPGLD 1316

Query: 218  G------------------------------IPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G                              IPG  G  G  GIPG +G  GE G+   +
Sbjct: 1317 GERGRPGSPGPRGPPGPSSDQGDSGNPGFPGIPGPQGPKGDQGIPGFSGPPGELGL---K 1373

Query: 248  GNRGKSGINGVPG 260
            G RG+ G+ G PG
Sbjct: 1374 GMRGEPGVMGTPG 1386



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 87/177 (49%), Gaps = 30/177 (16%)

Query: 112  PGLQGPIGQKGEIGAKG---------EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG  GP GQ GE G KG         ++G  G +GE G  GV   PG  G+PG  G  G 
Sbjct: 1127 PGTPGPKGQPGERGFKGIKGKDGPIGDVGFPGNKGEDGKDGV---PGDIGLPGSPGFPGI 1183

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G  G P   G+PG  G  G  G +G+PG +G  G  GL G  GL+G+PG  G  G PG 
Sbjct: 1184 AGLRGDP---GLPGSPGHAGVTGPLGHPGLVGPKGFPGLSGLHGLNGLPGTKGAHGTPGP 1240

Query: 223  D--GLPGKDGIPGTN----------GTNGEKGMTGPRGNRGKSGIN---GVPGTPAI 264
               G+PG  G+PG            G  G+ G+ G +G RG  G+    G+PG P I
Sbjct: 1241 SITGVPGPAGLPGPKGEKGSPGIGIGAPGKPGVRGQKGGRGFPGVQGPAGLPGAPGI 1297



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 102/246 (41%), Gaps = 92/246 (37%)

Query: 111  PPGLQGPIGQKGE----IGAKGEMGVKGERGEKGAPGVVGP---PGPQGI---------P 154
            P GL GP G+KG     IGA G+ GV+G++G +G PGV GP   PG  GI         P
Sbjct: 1248 PAGLPGPKGEKGSPGIGIGAPGKPGVRGQKGGRGFPGVQGPAGLPGAPGISLPSVIAGQP 1307

Query: 155  GDEGK---------------------------------------RGPKGDMGYPGPQGIP 175
            GD G+                                       +GPKGD G PG  G P
Sbjct: 1308 GDPGRPGLDGERGRPGSPGPRGPPGPSSDQGDSGNPGFPGIPGPQGPKGDQGIPGFSGPP 1367

Query: 176  GD---EGKRGPKGDMGYPGRI------------------GLDGRDGLPGE---------- 204
            G+   +G RG  G MG PG++                  G  G  G+PG+          
Sbjct: 1368 GELGLKGMRGEPGVMGTPGKVGPPGDPGLPGMKGKAGPGGFSGPRGVPGQTPIAEAIQVP 1427

Query: 205  ------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                  PG+DGIPG  G  G+ G  G  G  G+PG +G +G  G+ GP G  G  G+ G+
Sbjct: 1428 PGPLGLPGIDGIPGLVGDPGVQGPVGRQGSKGLPGISGKDGRSGLPGPPGVLGDPGVPGL 1487

Query: 259  PGTPAI 264
             G P  
Sbjct: 1488 QGPPGF 1493



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 92/207 (44%), Gaps = 52/207 (25%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------------P 154
            G  G  G+ G+ G++GE G  G  G++G PG+ G PG  G+                  P
Sbjct: 883  GFPGLAGRPGKKGSRGEAGHPGSTGKRGLPGLKGLPGSAGLIGFLGSSGLPGATGLPGLP 942

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLD 208
            G +G++G  G +G+PG  G+PG  G  G KG  G PGRIG  G  G PGE      PG  
Sbjct: 943  GPKGEKGSVGLIGFPGIPGLPGIPGASGLKGIPGSPGRIGTSGPAGSPGEKGDRGNPGPV 1002

Query: 209  GIPG------------------RNGMDGIPG------KDGLPGKDGIPGTNG----TNGE 240
            GIPG                    G DG PG      + G PG  G+PG  G      G 
Sbjct: 1003 GIPGPRLPMLNLWFKGDKGSRGSAGSDGFPGPRGDKGEAGRPGPTGLPGVPGLASSIKGL 1062

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAY 267
             G  GP G+ G  G+ G+ G P I  +
Sbjct: 1063 VGRPGPSGSLGLRGLPGLKGAPGITGF 1089



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 78/159 (49%), Gaps = 43/159 (27%)

Query: 112  PGLQGPIGQKGE------IGAKGEMGVKGERGEKGAPGVVGPPGP------------QGI 153
            PG+ GP G KG+       G  GE+G+KG RGE   PGV+G PG             +G 
Sbjct: 1346 PGIPGPQGPKGDQGIPGFSGPPGELGLKGMRGE---PGVMGTPGKVGPPGDPGLPGMKGK 1402

Query: 154  PGDEGKRGPKGDMGY----------PGPQGIP---------GDEGKRGP---KGDMGYPG 191
             G  G  GP+G  G           PGP G+P         GD G +GP   +G  G PG
Sbjct: 1403 AGPGGFSGPRGVPGQTPIAEAIQVPPGPLGLPGIDGIPGLVGDPGVQGPVGRQGSKGLPG 1462

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              G DGR GLPG PG+ G PG  G+ G PG +G PGK G
Sbjct: 1463 ISGKDGRSGLPGPPGVLGDPGVPGLQGPPGFEGAPGKQG 1501



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 66/138 (47%), Gaps = 30/138 (21%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKR-----------------GPKGDMGYPGRIG 194
           G+PG++G  GP+G   +PG  G+PG +G                   G KG  G PGR G
Sbjct: 604 GMPGEQGDDGPQG---HPGETGVPGKDGVPGLPGLPGPLGDAGQGFPGEKGFAGLPGRKG 660

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---------GEKGMTG 245
             G  GLPG  GL G PG  G+ G  G DGLPG+ G+PG  G           G  G+ G
Sbjct: 661 QHGLTGLPGI-GLPGSPGPRGLPGDKGIDGLPGQQGLPGPPGITLPCIITGLYGPSGLPG 719

Query: 246 PRGNRGKSGINGVPGTPA 263
             G  G  GI G PGTP 
Sbjct: 720 APGVPGPKGIRGYPGTPG 737



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 94/219 (42%), Gaps = 51/219 (23%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            GF  +  E    G+ G IG  G  G  G  G++G+ G  G+PG  G  GP G PG  G +
Sbjct: 1155 GFPGNKGEDGKDGVPGDIGLPGSPGFPGIAGLRGDPGLPGSPGHAGVTGPLGHPGLVGPK 1214

Query: 161  ---------------GPKGDMGYPGPQ--GIPGDEGKRGPKGDMGYPG-RIGLDGRDGLP 202
                           G KG  G PGP   G+PG  G  GPKG+ G PG  IG  G+ G+ 
Sbjct: 1215 GFPGLSGLHGLNGLPGTKGAHGTPGPSITGVPGPAGLPGPKGEKGSPGIGIGAPGKPGVR 1274

Query: 203  GEPGLDGIPGRNGMDGIPGKDG--LP----GKDGIPGTNGTNGEK--------------- 241
            G+ G  G PG  G  G+PG  G  LP    G+ G PG  G +GE+               
Sbjct: 1275 GQKGGRGFPGVQGPAGLPGAPGISLPSVIAGQPGDPGRPGLDGERGRPGSPGPRGPPGPS 1334

Query: 242  ------------GMTGPRGNRGKSGINGVPGTPAICAYK 268
                        G+ GP+G +G  GI G  G P     K
Sbjct: 1335 SDQGDSGNPGFPGIPGPQGPKGDQGIPGFSGPPGELGLK 1373



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 85/196 (43%), Gaps = 49/196 (25%)

Query: 85  WVWLNAYSRIPLVAMQ---GFCNSTKEYCPPGLQGPIGQKGEIGAKG---EMGVKGERGE 138
           W    +Y +  L   Q   G C    E    G  GPIG +G  G +G    +G+ G +GE
Sbjct: 66  WGEKRSYGK--LCGGQDCSGGCKCFPEKGTRGRPGPIGIQGPTGPQGFAGPIGLSGLKGE 123

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD---------------EGKRGP 183
           +G+PG +GP GP+G          KG MG PG  GI G                +G  G 
Sbjct: 124 RGSPGSLGPYGPKGD---------KGSMGVPGFLGINGIPGHPGHPGPRGPPGLDGCNGT 174

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-----------GKDGLPGKDGIP 232
           +G  G+P      G DG PG  G  GIPG+ G  G P           G  GLPG DG  
Sbjct: 175 EGAAGFP------GHDGYPGLLGPPGIPGQKGTKGDPVIAHGTLKGMKGDPGLPGLDGSA 228

Query: 233 GTNGTNGEKGMTGPRG 248
           G  G  G  G+TGP G
Sbjct: 229 GPEGAPGSPGVTGPTG 244



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 73/156 (46%), Gaps = 30/156 (19%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKG--------------DMGYPGPQGIPGDEGKRGPKG 185
           G PG  G  GPQG PG+ G  G  G                G+PG +G  G  G++G  G
Sbjct: 604 GMPGEQGDDGPQGHPGETGVPGKDGVPGLPGLPGPLGDAGQGFPGEKGFAGLPGRKGQHG 663

Query: 186 DMGYPGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDG--LP-------GKDGIPG 233
             G PG IGL G  G   LPG+ G+DG+PG+ G+   PG  G  LP       G  G+PG
Sbjct: 664 LTGLPG-IGLPGSPGPRGLPGDKGIDGLPGQQGL---PGPPGITLPCIITGLYGPSGLPG 719

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
             G  G KG+ G  G  G+ G+ G  G P      R
Sbjct: 720 APGVPGPKGIRGYPGTPGQPGVRGAKGEPGSAGLVR 755



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 76/154 (49%), Gaps = 23/154 (14%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           KG RG  G  G+ GP GPQG  G  G  G KG+ G PG  G     G +G KG MG PG 
Sbjct: 91  KGTRGRPGPIGIQGPTGPQGFAGPIGLSGLKGERGSPGSLG---PYGPKGDKGSMGVPGF 147

Query: 193 IGLDGRDGLPGEPG------LDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGE--- 240
           +G++G  G PG PG      LDG  G  G  G PG DG P   G  GIPG  GT G+   
Sbjct: 148 LGINGIPGHPGHPGPRGPPGLDGCNGTEGAAGFPGHDGYPGLLGPPGIPGQKGTKGDPVI 207

Query: 241 -----KGMTGPRGNR---GKSGINGVPGTPAICA 266
                KGM G  G     G +G  G PG+P +  
Sbjct: 208 AHGTLKGMKGDPGLPGLDGSAGPEGAPGSPGVTG 241


>gi|345307086|ref|XP_001505622.2| PREDICTED: collagen alpha-4(IV) chain [Ornithorhynchus anatinus]
          Length = 1690

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 102/196 (52%), Gaps = 35/196 (17%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA----PGVVGPPGPQGIPG 155
           QG       +C  G  GP G KG+ G  G  GVKGE+G +GA    PGV+G PG  G+PG
Sbjct: 451 QGLPGPDVVHCTSGPPGPQGMKGKAGPPGRSGVKGEKGNEGACACTPGVIGLPGTPGLPG 510

Query: 156 DEGKR---------GPKGDM------GYPGPQGIPGDEGKRGPKGDMG------YPGRIG 194
            +G++         G KGD       GYPGP GIPG  G  GPKG+ G        GR G
Sbjct: 511 RKGRKGELGYPGRFGEKGDQGSPGAKGYPGPSGIPGSLGMTGPKGEKGDRVIPRIKGRKG 570

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG--IPGTNGTNGEKGM---TGPRGN 249
             G  G PG PGL G PG++G +G  G  GLPG  G  +PG  G  G +G    TGPRG 
Sbjct: 571 ERGSQGPPGFPGLQGQPGQDGTEGPVGLPGLPGDRGGAVPGAKGFPGHQGAPGRTGPRGP 630

Query: 250 R-----GKSGINGVPG 260
                 G+ G+ G+PG
Sbjct: 631 SGLGFPGRQGMTGIPG 646



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/161 (44%), Positives = 89/161 (55%), Gaps = 18/161 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G+KGE+G  G  G   E+G++G+PG  G PGP GIPG  G  GPKG+ G    
Sbjct: 506 PGLPGRKGRKGELGYPGRFG---EKGDQGSPGAKGYPGPSGIPGSLGMTGPKGEKGD--- 559

Query: 172 QGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           + IP   G +G+RG +G  G+PG  G  G+DG  G  GL G+PG  G   +PG  G PG 
Sbjct: 560 RVIPRIKGRKGERGSQGPPGFPGLQGQPGQDGTEGPVGLPGLPGDRGGA-VPGAKGFPGH 618

Query: 229 DGIPGTNGTN--------GEKGMTGPRGNRGKSGINGVPGT 261
            G PG  G          G +GMTG  G+RG  G  G PG 
Sbjct: 619 QGAPGRTGPRGPSGLGFPGRQGMTGIPGDRGTVGDRGPPGA 659



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 98/200 (49%), Gaps = 44/200 (22%)

Query: 112  PGLQGPIGQKG---------EIGAKGEMGVKGERGEKGAP---------GVVGPPGPQGI 153
            PG +GP G +G         E+G KG+ G  G +GE+G           G  GP G +G+
Sbjct: 900  PGFRGPKGAQGLPGIPGFPGELGKKGQAGHPGRKGERGGDGHPGHPGDKGDWGPKGEKGL 959

Query: 154  PGDEGK------RGPKGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGL--------- 195
            PGDEG       +G KG++G PG  G+PG   D+G  G +G+ G PGR GL         
Sbjct: 960  PGDEGSISMISTKGEKGELGQPGEYGVPGERGDKGSSGLQGEEGLPGRDGLPGFQKGHPG 1019

Query: 196  -DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS- 253
              G+ G PG PG  G PG  G+ G PG  G PG DG  G  G +G  G+ GP+G RG S 
Sbjct: 1020 PSGQPGFPGLPGFPGSPGSRGVFGFPGLPGDPGDDGSRGIPGPSGPIGVKGPKGKRGDSI 1079

Query: 254  ------GINGVPGTPAICAY 267
                  G  G PG P    +
Sbjct: 1080 SLLGPLGEKGRPGNPGCAGH 1099



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 94/222 (42%), Gaps = 64/222 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP+G KGE G+    GVKGE+G  G PG+ G  G  G PG  G +G  GD G PGP 
Sbjct: 301 GLPGPVGAKGEPGS----GVKGEKGIPGFPGLRGHSGSYGSPGSPGLKGDPGDRGEPGPP 356

Query: 172 ----------QGIPGDEGKRGPKGDMGYPGRIG--------------------------- 194
                     +G+PGD G  GP G+MG  G++G                           
Sbjct: 357 GIMVTPPVPLKGLPGDPGVPGPYGEMGSVGKVGPPGPSGKPGEDRAGVTGPMGSRGAPGV 416

Query: 195 ------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNG 236
                        D   G PG PG  G PG  G  G+PG D      G PG  G+ G  G
Sbjct: 417 PGPPGEVGVPGKADAPPGKPGNPGYPGTPGARGEQGLPGPDVVHCTSGPPGPQGMKGKAG 476

Query: 237 TNGEKGMTGPRGNRGKS----GINGVPGTPAICAYKRESCSL 274
             G  G+ G +GN G      G+ G+PGTP +   K     L
Sbjct: 477 PPGRSGVKGEKGNEGACACTPGVIGLPGTPGLPGRKGRKGEL 518



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 103/241 (42%), Gaps = 73/241 (30%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGV------VGP 147
           +  QG         PPGL G  G +G+    GA GE G KG  G  G PG+       GP
Sbjct: 103 LGPQGPIGPCGASGPPGLPGEKGMRGDDGSAGAAGERGDKGPTGVPGFPGLDGVPGYPGP 162

Query: 148 PGPQGIPGDEGKRGPKGDMGYP---------GPQGIPGDEGKRG---------------- 182
           PG +G PG +G  G +GD G+P         GP G+PG +G++G                
Sbjct: 163 PGSRGKPGLDGHNGSRGDPGFPGQHGYPGQVGPAGLPGQKGEKGISAYVAEKGPPGPKGP 222

Query: 183 --PKGDMGYPGRIGLDGRDGLPGEPGLDGIP----------------------------- 211
              KG MG+PG+ G DG  GLPG PG  G P                             
Sbjct: 223 RGAKGGMGFPGKPGADGPQGLPGLPGAQGNPGVGIKGQTGDPGEVGHQGPPGPPLLVGPP 282

Query: 212 ------GRNGMDGIPGKDGLPGKDGIPG--TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                 G  G  G+PGK GLPG  G  G   +G  GEKG+ G  G RG SG  G PG+P 
Sbjct: 283 SSCLHKGEKGTKGMPGKSGLPGPVGAKGEPGSGVKGEKGIPGFPGLRGHSGSYGSPGSPG 342

Query: 264 I 264
           +
Sbjct: 343 L 343



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 77/174 (44%), Gaps = 43/174 (24%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP--GPQGIPGDEGKRGPKG------ 185
           G +G++G PG+   PGP G PGD G  G KGD G    GPQG PG  G  G KG      
Sbjct: 705 GAKGQRGKPGISEVPGPAGFPGDNGDPGFKGDKGTSPVGPQGFPGSPGINGQKGMPGDPA 764

Query: 186 -----------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD----------- 223
                        G+PG  G  G  G PG PG  G PG  G  G  G+            
Sbjct: 765 FGHPGLPGNKGSAGFPGPKGFRGDLGYPGSPGQAGTPGLPGTKGFKGQKGHNGPPGSPGP 824

Query: 224 ----------GLPGKDGIPGTNGTNGEKGMTGPRGNRGK---SGINGVPGTPAI 264
                     GLPG+ G+PG  G  G  G+ G +G+ G    +G+ G+PG P +
Sbjct: 825 PGYLCEKGSPGLPGQPGLPGPQGNPGYPGLKGQQGDMGAPGPAGMKGLPGAPGL 878



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 89/205 (43%), Gaps = 65/205 (31%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPG-DEGKRGPKGDMGYPGPQGI 174
            G+KGE+G  GE GV GERG+KG+ G+ G    PG  G+PG  +G  GP G  G+PG  G 
Sbjct: 973  GEKGELGQPGEYGVPGERGDKGSSGLQGEEGLPGRDGLPGFQKGHPGPSGQPGFPGLPGF 1032

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPG-------------------------EPGLDG 209
            PG  G RG  G  G PG  G DG  G+PG                         E G  G
Sbjct: 1033 PGSPGSRGVFGFPGLPGDPGDDGSRGIPGPSGPIGVKGPKGKRGDSISLLGPLGEKGRPG 1092

Query: 210  IPGRNGMDGIPG------------------------------KDGLPGKDGIPGT----- 234
             PG  G  G PG                                G PG+ GIPG      
Sbjct: 1093 NPGCAGHFGAPGDLGLPGPPGYPGTPGRPGPPGYPGQPGFPGTQGTPGQRGIPGEIGDPG 1152

Query: 235  -NGTNGEKGMTGPRGNRGKSGINGV 258
             +G  G++G+ GPRG +G SGI G+
Sbjct: 1153 ISGPIGDQGLAGPRGMKGFSGIPGL 1177



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 91/197 (46%), Gaps = 53/197 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG---------------------ERGEKGAPGVVGPPGP 150
            PG  G  GQ+G++GA G  G+KG                       G+ G PG  GP G 
Sbjct: 849  PGYPGLKGQQGDMGAPGPAGMKGLPGAPGLNGSSGPPGPPGNRGHLGDDGLPGFRGPKGA 908

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPG---- 191
            QG+PG  G     G++G  G  G PG +G+R               GPKG+ G PG    
Sbjct: 909  QGLPGIPGF---PGELGKKGQAGHPGRKGERGGDGHPGHPGDKGDWGPKGEKGLPGDEGS 965

Query: 192  --RIGLDGRDGLPGEPGLDGIPGR---NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
               I   G  G  G+PG  G+PG     G  G+ G++GLPG+DG+PG      +KG  GP
Sbjct: 966  ISMISTKGEKGELGQPGEYGVPGERGDKGSSGLQGEEGLPGRDGLPGF-----QKGHPGP 1020

Query: 247  RGNRGKSGINGVPGTPA 263
             G  G  G+ G PG+P 
Sbjct: 1021 SGQPGFPGLPGFPGSPG 1037



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 80/177 (45%), Gaps = 48/177 (27%)

Query: 135  ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEG------------ 179
            E+G  G PG  G PGPQG PG  G +G +GDMG PGP   +G+PG  G            
Sbjct: 830  EKGSPGLPGQPGLPGPQGNPGYPGLKGQQGDMGAPGPAGMKGLPGAPGLNGSSGPPGPPG 889

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---------------- 223
             RG  GD G PG  G  G  GLPG PG  G  G+ G  G PG+                 
Sbjct: 890  NRGHLGDDGLPGFRGPKGAQGLPGIPGFPGELGKKGQAGHPGRKGERGGDGHPGHPGDKG 949

Query: 224  --GLPGKDGIPGTNG------TNGEK---------GMTGPRGNRGKSGINGVPGTPA 263
              G  G+ G+PG  G      T GEK         G+ G RG++G SG+ G  G P 
Sbjct: 950  DWGPKGEKGLPGDEGSISMISTKGEKGELGQPGEYGVPGERGDKGSSGLQGEEGLPG 1006



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 87/171 (50%), Gaps = 31/171 (18%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGP------QGIPGDEGKRGP---------KGD 165
            +G +G  G  G +G +G +G PG+ G PG        G PG +G+RG          KGD
Sbjct: 891  RGHLGDDGLPGFRGPKGAQGLPGIPGFPGELGKKGQAGHPGRKGERGGDGHPGHPGDKGD 950

Query: 166  MGYPGPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGM 216
             G  G +G+PGDEG       +G KG++G PG  G+ G  G  G  GL   +G+PGR+G+
Sbjct: 951  WGPKGEKGLPGDEGSISMISTKGEKGELGQPGEYGVPGERGDKGSSGLQGEEGLPGRDGL 1010

Query: 217  DGI-------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G         G+ G PG  G PG+ G+ G  G  G  G+ G  G  G+PG
Sbjct: 1011 PGFQKGHPGPSGQPGFPGLPGFPGSPGSRGVFGFPGLPGDPGDDGSRGIPG 1061



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 71/146 (48%), Gaps = 37/146 (25%)

Query: 122 GEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G+ G  G  G  G RGE+G PG        GPPGPQG+   +GK GP            P
Sbjct: 434 GKPGNPGYPGTPGARGEQGLPGPDVVHCTSGPPGPQGM---KGKAGP------------P 478

Query: 176 GDEGKRGPKGDMGY----PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGL 225
           G  G +G KG+ G     PG IGL      PG PGL G  GR G  G PG+       G 
Sbjct: 479 GRSGVKGEKGNEGACACTPGVIGL------PGTPGLPGRKGRKGELGYPGRFGEKGDQGS 532

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRG 251
           PG  G PG +G  G  GMTGP+G +G
Sbjct: 533 PGAKGYPGPSGIPGSLGMTGPKGEKG 558



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 77/169 (45%), Gaps = 39/169 (23%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-------------- 164
           G KG  G  G  G +G+ G  G+PG  G PG   +PG +G +G KG              
Sbjct: 772 GNKGSAGFPGPKGFRGDLGYPGSPGQAGTPG---LPGTKGFKGQKGHNGPPGSPGPPGYL 828

Query: 165 -DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM------- 216
            + G PG   +PG  G  GP+G+ GYPG  G  G  G PG  G+ G+PG  G+       
Sbjct: 829 CEKGSPG---LPGQPGLPGPQGNPGYPGLKGQQGDMGAPGPAGMKGLPGAPGLNGSSGPP 885

Query: 217 -----------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                      DG+PG  G  G  G+PG  G  GE G  G  G+ G+ G
Sbjct: 886 GPPGNRGHLGDDGLPGFRGPKGAQGLPGIPGFPGELGKKGQAGHPGRKG 934



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 90/190 (47%), Gaps = 38/190 (20%)

Query: 117 PIGQKGEIGAKGEMGVKGERGEK--GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG- 173
           P+G +G  G+ G  G KG  G+   G PG+ G  G  G PG +G RG   D+GYPG  G 
Sbjct: 741 PVGPQGFPGSPGINGQKGMPGDPAFGHPGLPGNKGSAGFPGPKGFRG---DLGYPGSPGQ 797

Query: 174 -----IPGDEGKRG------------------PKGDMGYPGRIGLDGRDGLPGEPGLDG- 209
                +PG +G +G                   KG  G PG+ GL G  G PG PGL G 
Sbjct: 798 AGTPGLPGTKGFKGQKGHNGPPGSPGPPGYLCEKGSPGLPGQPGLPGPQGNPGYPGLKGQ 857

Query: 210 -----IPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                 PG  GM G+PG  GL    G  G PG  G  G+ G+ G RG +G  G+ G+PG 
Sbjct: 858 QGDMGAPGPAGMKGLPGAPGLNGSSGPPGPPGNRGHLGDDGLPGFRGPKGAQGLPGIPGF 917

Query: 262 PAICAYKRES 271
           P     K ++
Sbjct: 918 PGELGKKGQA 927



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 66/131 (50%), Gaps = 21/131 (16%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           +KG  G  GE+G +G  G  GA G  G PG +G+ GD+G                 G  G
Sbjct: 93  EKGSRGQPGELGPQGPIGPCGASGPPGLPGEKGMRGDDGSA---------------GAAG 137

Query: 180 KRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
           +RG KG  G PG  GLDG  G P      G+PGLDG  G  G  G PG+ G PG+ G  G
Sbjct: 138 ERGDKGPTGVPGFPGLDGVPGYPGPPGSRGKPGLDGHNGSRGDPGFPGQHGYPGQVGPAG 197

Query: 234 TNGTNGEKGMT 244
             G  GEKG++
Sbjct: 198 LPGQKGEKGIS 208



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 81/186 (43%), Gaps = 49/186 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
           G QGPIG  G  G  G  G KG RG+ G+ G  G         + G +GP G  G+PG  
Sbjct: 104 GPQGPIGPCGASGPPGLPGEKGMRGDDGSAGAAG---------ERGDKGPTGVPGFPGLD 154

Query: 171 ----------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                      +G PG +G  G +GD G+P      G+ G PG+ G  G+PG+ G  GI 
Sbjct: 155 GVPGYPGPPGSRGKPGLDGHNGSRGDPGFP------GQHGYPGQVGPAGLPGQKGEKGIS 208

Query: 221 ------------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                             G  G PGK   PG +G  G  G+ G +GN G  GI G  G P
Sbjct: 209 AYVAEKGPPGPKGPRGAKGGMGFPGK---PGADGPQGLPGLPGAQGNPG-VGIKGQTGDP 264

Query: 263 AICAYK 268
               ++
Sbjct: 265 GEVGHQ 270



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 75/181 (41%), Gaps = 57/181 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------------------P 147
           PG +G  G  G  G +G++G  G  G+ G PG+ G                         
Sbjct: 771 PGNKGSAGFPGPKGFRGDLGYPGSPGQAGTPGLPGTKGFKGQKGHNGPPGSPGPPGYLCE 830

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            G  G+PG  G  GP+G+ GYP         G +G +GDMG PG  G+    GLPG PGL
Sbjct: 831 KGSPGLPGQPGLPGPQGNPGYP---------GLKGQQGDMGAPGPAGM---KGLPGAPGL 878

Query: 208 ------------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                             DG+PG  G  G     GLPG  G PG  G  G+ G  G +G 
Sbjct: 879 NGSSGPPGPPGNRGHLGDDGLPGFRGPKGA---QGLPGIPGFPGELGKKGQAGHPGRKGE 935

Query: 250 R 250
           R
Sbjct: 936 R 936



 Score = 42.7 bits (99), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 75/187 (40%), Gaps = 56/187 (29%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPP-----GPQGIPGDEG----------------- 158
           KG +G  G+ G  G +G  G PG  G P     G  G PG+ G                 
Sbjct: 226 KGGMGFPGKPGADGPQGLPGLPGAQGNPGVGIKGQTGDPGEVGHQGPPGPPLLVGPPSSC 285

Query: 159 -KRGPKGDMGYPGPQGIPG--------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             +G KG  G PG  G+PG          G +G KG  G+PG  G  G  G PG PGL G
Sbjct: 286 LHKGEKGTKGMPGKSGLPGPVGAKGEPGSGVKGEKGIPGFPGLRGHSGSYGSPGSPGLKG 345

Query: 210 IPGRNGMDGIPG--------KDGLPGKDGIPGTNGTNG-----------------EKGMT 244
            PG  G  G PG          GLPG  G+PG  G  G                   G+T
Sbjct: 346 DPGDRGEPGPPGIMVTPPVPLKGLPGDPGVPGPYGEMGSVGKVGPPGPSGKPGEDRAGVT 405

Query: 245 GPRGNRG 251
           GP G+RG
Sbjct: 406 GPMGSRG 412


>gi|194856466|ref|XP_001968755.1| GG25042 [Drosophila erecta]
 gi|190660622|gb|EDV57814.1| GG25042 [Drosophila erecta]
          Length = 1776

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/182 (42%), Positives = 96/182 (52%), Gaps = 26/182 (14%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYP 169
            G +G  G+KG+ G +GE G  G +G KG PG+ GPPG  G   IPGD+G  GP G+ GYP
Sbjct: 1229 GERGYTGEKGDQGKRGETGQPGYKGAKGDPGLHGPPGASGLNGIPGDKGDTGPSGEPGYP 1288

Query: 170  G-----PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------------ 212
            G      +G+PG  G+ G +G +G PG IG  G  GLPGEPGL G+PG            
Sbjct: 1289 GVTIKGEKGLPGRTGRNGRQGLVGAPGLIGERGLPGLPGEPGLVGLPGPIGPAGSKGERG 1348

Query: 213  ------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                    G DG PG  GL G  G  G  G  G  G  G +G++G  G+ G PG P +  
Sbjct: 1349 LAGSPGNPGQDGFPGAAGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPPGLPGLVG 1408

Query: 267  YK 268
             K
Sbjct: 1409 QK 1410



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/183 (42%), Positives = 94/183 (51%), Gaps = 30/183 (16%)

Query: 111 PPGLQGPIGQKGEIG------AKGEMGVKGERGEK------GAPGVVGPPGPQGIPGDEG 158
           PPGL G  GQKG+ G       KG+MG+KG+ G K      G  G  G  G  GIPG +G
Sbjct: 530 PPGLAGAPGQKGDPGRPGIHGQKGDMGIKGDVGGKCSSCRAGPKGEKGTSGLPGIPGKDG 589

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------------- 205
            RGP G+ GYPG +G  G  G+ GP G+ G  GR G+ G  G PG P             
Sbjct: 590 VRGPPGERGYPGERGHDGINGQTGPPGEKGEDGRSGVPGATGEPGRPAMVDLNSVAAEKG 649

Query: 206 --GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR---GKSGINGVPG 260
             G  G PG  G+ G  G DG PG DG  G  G  GEKG++G  GN    G++G +G PG
Sbjct: 650 DKGSPGAPGAKGVKGFSGADGFPGNDGPKGEFGFKGEKGLSGAPGNDGIPGRAGRDGYPG 709

Query: 261 TPA 263
            P 
Sbjct: 710 IPG 712



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 100/209 (47%), Gaps = 43/209 (20%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   QG+         PG  G  G  G+ G KG  G+ G +G  G  G  GPPGP+G  G
Sbjct: 421 LPGPQGYTGQKGGAGLPGQNGNEGPPGKKGEKGTAGLNGPKGSIGPIGHAGPPGPEGQKG 480

Query: 156 DEGK-----RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG--RIGLDGRDGLPGEPGLD 208
           + G      +GPKGD G PG  G+ G +G+RG KG+ G PG  ++G  G  GL G PG  
Sbjct: 481 EAGMPGYGIQGPKGDAGKPGYPGLKGSKGERGFKGNAGAPGDSKLGRSGPPGLAGAPGQK 540

Query: 209 GIPGR---------------------------------NGMDGIPGKDGL---PGKDGIP 232
           G PGR                                 +G+ GIPGKDG+   PG+ G P
Sbjct: 541 GDPGRPGIHGQKGDMGIKGDVGGKCSSCRAGPKGEKGTSGLPGIPGKDGVRGPPGERGYP 600

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G +G  G TGP G +G+ G +GVPG 
Sbjct: 601 GERGHDGINGQTGPPGEKGEDGRSGVPGA 629



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 96/189 (50%), Gaps = 41/189 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------------E 157
            G++G  G  G  G  G  G+ GE+G +G PG+ G PG   +PGD                
Sbjct: 1014 GIKGDQGLAGAPGQPGLDGLPGEKGNQGFPGLDGAPG---LPGDASEKGQKGEPGLSGLR 1070

Query: 158  GKRGPKGDMGYPGPQGIPG--DEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------- 205
            G  GP G  G+PG +G+PG    G+ GP+G+ G  GR G+DGRDGL GE           
Sbjct: 1071 GDTGPAGQPGWPGEKGMPGLAVHGRAGPQGEKGDQGRSGIDGRDGLNGEKGDQGLQGVWG 1130

Query: 206  --------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS---G 254
                    G  GIPG  GMDG+PG  G PG  G PG  G  GE+G+TG  G +G++   G
Sbjct: 1131 QTGEKGSVGAPGIPGSPGMDGLPGDAGAPGAVGYPGDRGDKGERGLTGLPGLKGETGPIG 1190

Query: 255  INGVPGTPA 263
            ++G  G P 
Sbjct: 1191 LSGFAGAPG 1199



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 93/183 (50%), Gaps = 29/183 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---GYP 169
            GL G  G  G +G  G+ G KGERG  G PG+ G  GP G+ G  G  GPKG+    G P
Sbjct: 1151 GLPGDAGAPGAVGYPGDRGDKGERGLTGLPGLKGETGPIGLSGFAGAPGPKGERGIRGQP 1210

Query: 170  GP---------QGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            GP         +G  G +G+R   G KGD G  G  G  G  G  G+PGL G PG +G++
Sbjct: 1211 GPPTIINVEDLRGEKGSQGERGYTGEKGDQGKRGETGQPGYKGAKGDPGLHGPPGASGLN 1270

Query: 218  GIPGKDG--------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            GIPG  G              + G+ G+PG  G NG +G+ G  G  G+ G+ G+PG P 
Sbjct: 1271 GIPGDKGDTGPSGEPGYPGVTIKGEKGLPGRTGRNGRQGLVGAPGLIGERGLPGLPGEPG 1330

Query: 264  ICA 266
            +  
Sbjct: 1331 LVG 1333



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 105/236 (44%), Gaps = 33/236 (13%)

Query: 40   VDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAM 99
            +  DKGD   +  P  P V          I+  +     +  N     + A   I    +
Sbjct: 1272 IPGDKGDTGPSGEPGYPGVT---------IKGEKGLPGRTGRNGRQGLVGAPGLIGERGL 1322

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD--- 156
             G          PG  GP G KGE G  G  G  G+ G  GA G+ G  GPQG  G+   
Sbjct: 1323 PGLPGEPGLVGLPGPIGPAGSKGERGLAGSPGNPGQDGFPGAAGLKGDTGPQGFKGERGL 1382

Query: 157  ---EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
               EG++G KGD G  GP G+PG  G+   KGD+GY G  G DG  G PGE GL G  GR
Sbjct: 1383 NGFEGQKGDKGDRGLQGPPGLPGLVGQ---KGDIGYTGLNGNDGPVGAPGERGLTGPKGR 1439

Query: 214  NGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGING 257
            +G DG P   GLPG+ G PG              G NG KG  G  G RG  GI G
Sbjct: 1440 DGRDGTP---GLPGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQG 1492



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/196 (40%), Positives = 96/196 (48%), Gaps = 30/196 (15%)

Query: 86  VWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---------- 135
              + Y  IP  A++G          PG  G  G+KG+ G+ G  G KGE          
Sbjct: 702 AGRDGYPGIPGQAIKGE---------PGFNGRDGEKGDKGSFGRSGEKGEPGSCEIAELK 752

Query: 136 ---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGY 189
              +G KG PG  G PG  G  G  G+RG  G  G  GPQG PG EG R   GP+G+ G 
Sbjct: 753 AIEKGNKGEPGQTGMPGSPGRDGSPGERGLPGMKGNTGPQGPPGIEGPRGLNGPRGEKGN 812

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL--PGKDGIPGTNGTNGEKGMTGPR 247
            G +G+ G    PG+ GL GI GRNG  G  G+ G+  PG  G PG NG  GEKG  GP 
Sbjct: 813 QGAVGVPGN---PGKDGLRGINGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGERGPT 869

Query: 248 GNRGKSGINGVPGTPA 263
           G  G  G +G  G P 
Sbjct: 870 GAIGLPGADGAVGYPG 885



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 97/193 (50%), Gaps = 50/193 (25%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           G+ GP G  G++G+KGE G          KGE+GE G  G  G  GPQG+PG++G+RG  
Sbjct: 177 GMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGLPGEKGERGDS 236

Query: 164 GDMGYPGPQGIPGDEGKRGP-------------KGDMGYP-------------------G 191
           G  G  GP+G  G +G++G              KG+ G P                   G
Sbjct: 237 GPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSLPSKPTHTVMGPRGDTG 296

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRG 248
           + G  GRDG  GEPGL+G     G DG  G+ GLPG    PG  G  G     G TG +G
Sbjct: 297 QKGEQGRDGRKGEPGLEG---ETGADGQKGEKGLPGG---PGDRGRQGNFGPPGSTGQKG 350

Query: 249 NRGKSGINGVPGT 261
           +RG+ G+NG+PG+
Sbjct: 351 DRGEPGLNGLPGS 363



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 88/178 (49%), Gaps = 50/178 (28%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGI 174
            +GE G++GE G  GE+G++G  G  G PG          +G KGD G  GP       GI
Sbjct: 1222 RGEKGSQGERGYTGEKGDQGKRGETGQPG---------YKGAKGDPGLHGPPGASGLNGI 1272

Query: 175  PGDEGKRGPKGDMGY-----------PGRIGLDGRD---------------GLPGEPGLD 208
            PGD+G  GP G+ GY           PGR G +GR                GLPGEPGL 
Sbjct: 1273 PGDKGDTGPSGEPGYPGVTIKGEKGLPGRTGRNGRQGLVGAPGLIGERGLPGLPGEPGLV 1332

Query: 209  GIP------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+P      G  G  G+ G  G PG+DG PG  G    KG TGP+G +G+ G+NG  G
Sbjct: 1333 GLPGPIGPAGSKGERGLAGSPGNPGQDGFPGAAGL---KGDTGPQGFKGERGLNGFEG 1387



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 90/188 (47%), Gaps = 13/188 (6%)

Query: 112 PGLQGPIG---QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG++GP G   QKG+ G  G+ G KGERG  G  G  G PG QG  G+ G  G  G  G 
Sbjct: 104 PGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGVPGAQGPAGNPGAPGINGKDGC 163

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G  GI G EG  G  G  GY G++G  G  G P +   D   G  G  G  G  GL G 
Sbjct: 164 DGEDGIAGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGP 223

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGING----------VPGTPAICAYKRESCSLLPNS 278
            G+PG  G  G+ G  G +G RG+ G+ G           PG P I   K E  S LP+ 
Sbjct: 224 QGLPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSLPSK 283

Query: 279 ETSQLLIP 286
            T  ++ P
Sbjct: 284 PTHTVMGP 291



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 86/189 (45%), Gaps = 34/189 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QG  G+KGE G +GE G  G++GEKG PG  G  G QG  G  G  G KGD G PG  
Sbjct: 299 GEQGRDGRKGEPGLEGETGADGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLN 358

Query: 173 GIPGDEGKRGPKGDMGY----------------------------------PGRIGLDGR 198
           G+PG  G++G  G  G                                   PG  GL+G 
Sbjct: 359 GLPGSTGQKGEPGLAGATGQPGLLGPPGPPGGGRGTPGPPGPKGPRGYSGKPGPQGLNGN 418

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           DGLPG  G  G  G  G+ G  G +G PGK G  GT G NG KG  GP G+ G  G  G 
Sbjct: 419 DGLPGPQGYTGQKGGAGLPGQNGNEGPPGKKGEKGTAGLNGPKGSIGPIGHAGPPGPEGQ 478

Query: 259 PGTPAICAY 267
            G   +  Y
Sbjct: 479 KGEAGMPGY 487



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 93/172 (54%), Gaps = 18/172 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL+G  G KGE G+ G +G+ G +G++GAPG  GP G  G+ G  GKRGP G  G  G +
Sbjct: 927  GLRGLNGVKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGLTGASGAK 986

Query: 173  GIPGDEGKRGPKGDMGYPGR------IGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKD 223
            G  G  G  G  G MG  G       +G+ G  GL   PG+PGLDG+PG  G  G PG D
Sbjct: 987  GEKGAAGLNGNDGPMGGRGAPGAPGLMGIKGDQGLAGAPGQPGLDGLPGEKGNQGFPGLD 1046

Query: 224  GLPGKDGIPG---TNGTNGEKGMTGPRGNRGKSGINGVPGT---PAICAYKR 269
            G     G+PG     G  GE G++G RG+ G +G  G PG    P +  + R
Sbjct: 1047 GA---PGLPGDASEKGQKGEPGLSGLRGDTGPAGQPGWPGEKGMPGLAVHGR 1095



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 86/152 (56%), Gaps = 3/152 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G++G +GA G +G +G  G  G PG+VG PGP G  G +G+RG  G  G PG 
Sbjct: 1299 PGRTGRNGRQGLVGAPGLIGERGLPGLPGEPGLVGLPGPIGPAGSKGERGLAGSPGNPGQ 1358

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGMDGIPGKDGLPGK 228
             G PG  G +G  G  G+ G  GL+G +G  G+    GL G PG  G+ G  G  G  G 
Sbjct: 1359 DGFPGAAGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPPGLPGLVGQKGDIGYTGL 1418

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +G  G  G  GE+G+TGP+G  G+ G  G+PG
Sbjct: 1419 NGNDGPVGAPGERGLTGPKGRDGRDGTPGLPG 1450



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 89/197 (45%), Gaps = 50/197 (25%)

Query: 111 PPGLQGPIGQKGEIGA---------------KGEMGVKGERGEKG--APGVVGPPGPQGI 153
           P GL GP G+KG  GA                G  G  G RGE G   PG +GPPG  G+
Sbjct: 800 PRGLNGPRGEKGNQGAVGVPGNPGKDGLRGINGRNGQPGPRGEPGISRPGPMGPPGLNGL 859

Query: 154 PGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRI----------------- 193
            G++G+RGP G +G PG  G    PG+ G  G  G  G PG +                 
Sbjct: 860 QGEKGERGPTGAIGLPGADGAVGYPGERGDAGLPGIAGRPGNVGQKGDMGPVGPPGVSGP 919

Query: 194 ----------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGE 240
                     GL+G  G PG PGL G+PG  G  G PG D   G  G  G PG  G  G 
Sbjct: 920 PGVPGIEGLRGLNGVKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGL 979

Query: 241 KGMTGPRGNRGKSGING 257
            G +G +G +G +G+NG
Sbjct: 980 TGASGAKGEKGAAGLNG 996



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 96/200 (48%), Gaps = 42/200 (21%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGPPGPQ 151
           G C+S    C  G +G  G  G  G  G+ GV+G  GE+G P         G  GPPG +
Sbjct: 563 GKCSS----CRAGPKGEKGTSGLPGIPGKDGVRGPPGERGYPGERGHDGINGQTGPPGEK 618

Query: 152 ------GIPGDEG---------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                 G+PG  G               ++G KG  G PG +G+ G  G  G  G+ G  
Sbjct: 619 GEDGRSGVPGATGEPGRPAMVDLNSVAAEKGDKGSPGAPGAKGVKGFSGADGFPGNDGPK 678

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK--DGIPGTNGTNGEKGMTGPRG 248
           G  G  G  GL G PG DGIPGR G DG P   G+PG+   G PG NG +GEKG    +G
Sbjct: 679 GEFGFKGEKGLSGAPGNDGIPGRAGRDGYP---GIPGQAIKGEPGFNGRDGEKGD---KG 732

Query: 249 NRGKSGINGVPGTPAICAYK 268
           + G+SG  G PG+  I   K
Sbjct: 733 SFGRSGEKGEPGSCEIAELK 752



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 87/176 (49%), Gaps = 26/176 (14%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG--DEGKRGPKGDM 166
            PGL G  G  G   E G KGE G+ G RG+ G  G  G PG +G+PG    G+ GP+G+ 
Sbjct: 1043 PGLDGAPGLPGDASEKGQKGEPGLSGLRGDTGPAGQPGWPGEKGMPGLAVHGRAGPQGEK 1102

Query: 167  GYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGE---PGLD 208
            G  G  GI G +G  G KGD               +G PG  G  G DGLPG+   PG  
Sbjct: 1103 GDQGRSGIDGRDGLNGEKGDQGLQGVWGQTGEKGSVGAPGIPGSPGMDGLPGDAGAPGAV 1162

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G PG  G  G  G  GLPG  G  G  G +G  G  GP+G R   GI G PG P I
Sbjct: 1163 GYPGDRGDKGERGLTGLPGLKGETGPIGLSGFAGAPGPKGER---GIRGQPGPPTI 1215



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 89/178 (50%), Gaps = 22/178 (12%)

Query: 104 NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            S  E   PG++G  G +G  G +G  G+ G RGEKG  G VG PG    PG +G RG  
Sbjct: 775 GSPGERGLPGMKGNTGPQGPPGIEGPRGLNGPRGEKGNQGAVGVPG---NPGKDGLRGIN 831

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK- 222
           G  G PGP+G PG   + GP   MG PG  GL G  G  G  G  G+PG +G  G PG+ 
Sbjct: 832 GRNGQPGPRGEPGIS-RPGP---MGPPGLNGLQGEKGERGPTGAIGLPGADGAVGYPGER 887

Query: 223 --DGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGINGVPGTPAICA 266
              GLPG  G PG  G  G+ G  GP             G RG +G+ G PG+P +  
Sbjct: 888 GDAGLPGIAGRPGNVGQKGDMGPVGPPGVSGPPGVPGIEGLRGLNGVKGEPGSPGLVG 945



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------VGPPGPQGIPGDEGKRGPK 163
            G QG  G +G  G  G  G+ GE+G++G  GV         VG P   GIPG  G  G  
Sbjct: 1097 GPQGEKGDQGRSGIDGRDGLNGEKGDQGLQGVWGQTGEKGSVGAP---GIPGSPGMDGLP 1153

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            GD G PG  G PGD G +G +G  G PG  G  G  GL G  G  G  G  G+ G PG  
Sbjct: 1154 GDAGAPGAVGYPGDRGDKGERGLTGLPGLKGETGPIGLSGFAGAPGPKGERGIRGQPGPP 1213

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             +   + + G  G+ GE+G TG +G++GK G  G PG
Sbjct: 1214 TIINVEDLRGEKGSQGERGYTGEKGDQGKRGETGQPG 1250



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 84/178 (47%), Gaps = 8/178 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G  G  G +G  G KG  G  G  G  GPPG +G  G  G  GPKG +G  G 
Sbjct: 410 PGPQGLNGNDGLPGPQGYTGQKGGAGLPGQNGNEGPPGKKGEKGTAGLNGPKGSIGPIGH 469

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G PG EG+   KG+ G PG  G+ G  G  G+PG  G+ G  G  G  G  G PG   +
Sbjct: 470 AGPPGPEGQ---KGEAGMPG-YGIQGPKGDAGKPGYPGLKGSKGERGFKGNAGAPGDSKL 525

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI---CAYKRESCSLLPNSETSQLLIP 286
            G +G  G  G  G +G+ G+ GI+G  G   I      K  SC   P  E     +P
Sbjct: 526 -GRSGPPGLAGAPGQKGDPGRPGIHGQKGDMGIKGDVGGKCSSCRAGPKGEKGTSGLP 582



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 90/210 (42%), Gaps = 54/210 (25%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM---------------------GV 132
            I L    G      E    GL G  G+ G +G KG+M                     G+
Sbjct: 872  IGLPGADGAVGYPGERGDAGLPGIAGRPGNVGQKGDMGPVGPPGVSGPPGVPGIEGLRGL 931

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
             G +GE G+PG+VG      +PG++G RG  G+ G  G  G+ G  GKRGP G  G  G 
Sbjct: 932  NGVKGEPGSPGLVG------MPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGLTGASGA 985

Query: 193  IGLDGRDGLPGEPG------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
             G  G  GL G  G            L GI G  G+ G PG+ GL   DG+PG       
Sbjct: 986  KGEKGAAGLNGNDGPMGGRGAPGAPGLMGIKGDQGLAGAPGQPGL---DGLPGE------ 1036

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                  +GN+G  G++G PG P   + K +
Sbjct: 1037 ------KGNQGFPGLDGAPGLPGDASEKGQ 1060



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 88/211 (41%), Gaps = 59/211 (27%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD-----------EGKRGPKGDMG 167
           G KGE G KGE G+ G  G  G PG  G  G  GIPG            +G++G KG  G
Sbjct: 676 GPKGEFGFKGEKGLSGAPGNDGIPGRAGRDGYPGIPGQAIKGEPGFNGRDGEKGDKGSFG 735

Query: 168 YPGPQGIPG----------DEGKRGPKGDMGYPGRIGLDG---RDGLP---------GEP 205
             G +G PG          ++G +G  G  G PG  G DG     GLP         G P
Sbjct: 736 RSGEKGEPGSCEIAELKAIEKGNKGEPGQTGMPGSPGRDGSPGERGLPGMKGNTGPQGPP 795

Query: 206 GLDGIPGRNGMDGIPGKDGL------PGKDGIPGTNGTNGE------------------- 240
           G++G  G NG  G  G  G       PGKDG+ G NG NG+                   
Sbjct: 796 GIEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGINGRNGQPGPRGEPGISRPGPMGPPG 855

Query: 241 -KGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G+ G +G RG +G  G+PG      Y  E
Sbjct: 856 LNGLQGEKGERGPTGAIGLPGADGAVGYPGE 886



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 91/222 (40%), Gaps = 60/222 (27%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPG-- 143
           L   QG      E    G  G  G +GE G KGE G            G +GEKG P   
Sbjct: 220 LAGPQGLPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASS 279

Query: 144 --------VVGPPGPQGIPGDEGKRGPKGDMGY---------PGPQGIPGDEGKRGPKGD 186
                   V+GP G  G  G++G+ G KG+ G           G +G+PG  G RG +G+
Sbjct: 280 LPSKPTHTVMGPRGDTGQKGEQGRDGRKGEPGLEGETGADGQKGEKGLPGGPGDRGRQGN 339

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK------------------ 228
            G PG  G  G     GEPGL+G+PG  G  G PG  G  G+                  
Sbjct: 340 FGPPGSTGQKGDR---GEPGLNGLPGSTGQKGEPGLAGATGQPGLLGPPGPPGGGRGTPG 396

Query: 229 ----------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      G PG  G NG  G+ GP+G  G+ G  G+PG
Sbjct: 397 PPGPKGPRGYSGKPGPQGLNGNDGLPGPQGYTGQKGGAGLPG 438



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 74/197 (37%), Gaps = 63/197 (31%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + GF     +    GLQGP G  G +G KG++G  G  G           GP G PG+ 
Sbjct: 1381 GLNGFEGQKGDKGDRGLQGPPGLPGLVGQKGDIGYTGLNGND---------GPVGAPGER 1431

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG----- 212
            G  GPK                              G DGRDG PG PG  G PG     
Sbjct: 1432 GLTGPK------------------------------GRDGRDGTPGLPGQKGEPGMLPPP 1461

Query: 213  ----------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRGNRGKS 253
                      RNG  G PG+ G  G  GI G  G  GE+G+          GP+G RG+ 
Sbjct: 1462 GPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGERGLIGETGNVGRIGPKGERGEQ 1521

Query: 254  GINGVPGTPAICAYKRE 270
            G  G  G   +   K E
Sbjct: 1522 GERGYEGAIGLVGQKGE 1538


>gi|410968536|ref|XP_003990758.1| PREDICTED: macrophage receptor MARCO [Felis catus]
          Length = 435

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 88/180 (48%), Gaps = 27/180 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
           PGLQGP G KGE G +G  G  G++G  G PG  G  G +G      + G+ G +G KGD
Sbjct: 108 PGLQGPPGIKGEAGLQGPSGTPGKQGTPGTPGRQGEKGSKGDGGLAGLKGEPGAKGDKGD 167

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G PG +   GD G +G  G MG PG  G  G  G PG PG  G PG  G  G PG  GL
Sbjct: 168 LGLPGSK---GDMGMKGDTGVMGPPGAQGSKGDSGKPGLPGAAGSPGMKGDQGQPGAQGL 224

Query: 226 PGKDGIPGTNGTNGEKGMT------------------GPRGNRGKSGINGVPGTPAICAY 267
           PG  G  G+ G  GE G T                  G +G++G SG+ G  GT     +
Sbjct: 225 PGSPGAAGSPGAKGEPGSTGPPGLTGPPGIPGMPGADGMKGSKGDSGLQGQKGTKGESGF 284



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 83/189 (43%), Gaps = 33/189 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G  G  G KG  G  G  G KG PG  G  G  G+PG +G  G KGD G  GP
Sbjct: 129 PGKQGTPGTPGRQGEKGSKGDGGLAGLKGEPGAKGDKGDLGLPGSKGDMGMKGDTGVMGP 188

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK--- 228
              PG +G +G  G  G PG  G  G  G  G+PG  G+PG  G  G PG  G PG    
Sbjct: 189 ---PGAQGSKGDSGKPGLPGAAGSPGMKGDQGQPGAQGLPGSPGAAGSPGAKGEPGSTGP 245

Query: 229 ------------------------DGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGT 261
                                    G+ G  GT GE G  GP   +G++G  G+ G+ G 
Sbjct: 246 PGLTGPPGIPGMPGADGMKGSKGDSGLQGQKGTKGESGFPGPAGMKGSQGSPGLAGLKGA 305

Query: 262 PAICAYKRE 270
           P +   K E
Sbjct: 306 PGLKGQKGE 314



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 83/179 (46%), Gaps = 30/179 (16%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   S  +    GL+G  G KG+ G  G  G KG+ G KG  GV+GPPG QG  GD GK
Sbjct: 141 QGEKGSKGDGGLAGLKGEPGAKGDKGDLGLPGSKGDMGMKGDTGVMGPPGAQGSKGDSGK 200

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------ 213
                        G+PG  G  G KGD G PG  GL G  G  G PG  G PG       
Sbjct: 201 ------------PGLPGAAGSPGMKGDQGQPGAQGLPGSPGAAGSPGAKGEPGSTGPPGL 248

Query: 214 ------------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                       +GM G  G  GL G+ G  G +G  G  GM G +G+ G +G+ G PG
Sbjct: 249 TGPPGIPGMPGADGMKGSKGDSGLQGQKGTKGESGFPGPAGMKGSQGSPGLAGLKGAPG 307



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 62/139 (44%), Gaps = 18/139 (12%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G    T    PPG QG  G  G+ G  G  G  G +G++G PG  G PG  G  G  G +
Sbjct: 178 GMKGDTGVMGPPGAQGSKGDSGKPGLPGAAGSPGMKGDQGQPGAQGLPGSPGAAGSPGAK 237

Query: 161 GPKGDM------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G  G                    G  G +G  G +G++G KG+ G+PG  G+ G  G P
Sbjct: 238 GEPGSTGPPGLTGPPGIPGMPGADGMKGSKGDSGLQGQKGTKGESGFPGPAGMKGSQGSP 297

Query: 203 GEPGLDGIPGRNGMDGIPG 221
           G  GL G PG  G  G PG
Sbjct: 298 GLAGLKGAPGLKGQKGEPG 316


>gi|403297197|ref|XP_003939465.1| PREDICTED: collagen alpha-2(VI) chain isoform 1 [Saimiri
           boliviensis boliviensis]
          Length = 918

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 87/163 (53%), Gaps = 21/163 (12%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           PPG +G  GQKG  G  GE G  G++G +G PG+ GP   PGP+G+PG +G+   KG+ G
Sbjct: 257 PPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGVPGFKGE---KGEFG 313

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G +G  G  GK G  G  G  GRI         G PG  G PG  G DG PG+ G PG
Sbjct: 314 ADGRKGASGLAGKNGTDGQKGKLGRI---------GPPGCKGDPGNRGPDGYPGEAGSPG 364

Query: 228 KDGIPGTNGTNGEKGM------TGPRGNRGKSGINGVPGTPAI 264
           + G  G  G  G  G       +G +G++G  G +G PG+P +
Sbjct: 365 ERGDQGGKGEPGRPGRRGPPGDSGAKGSKGYQGNDGAPGSPGL 407



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 83/175 (47%), Gaps = 21/175 (12%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +G  G  GE G  GERG++G  G  G PG +G PGD G +G KG  G  G
Sbjct: 341 PPGCKGDPGNRGPDGYPGEAGSPGERGDQGGKGEPGRPGRRGPPGDSGAKGSKGYQGNDG 400

Query: 171 PQGIPG---------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G PG               + G+RG  G  G PG  G  G  G PG  G  G+ G  G
Sbjct: 401 APGSPGLKGAKGGPGPRGPKGEPGRRGDPGSKGSPGINGTKGEKGDPGPEGPRGLAGEVG 460

Query: 216 MDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  GLPG        G PG  G+ G+ G  GPRG+ G+ G  G PG P  
Sbjct: 461 SKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGF 515



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 67/127 (52%), Gaps = 22/127 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+ G  G+KG+ G +G  G+ GE G KGA G   + GP GPQG  G+ GK+G +GD G 
Sbjct: 435 PGINGTKGEKGDPGPEGPRGLAGEVGSKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGD 494

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------------GLDGIPGR 213
            GP+G   D G+ GPKGD G PG     G  G PGE                GL G PGR
Sbjct: 495 AGPRG---DSGQPGPKGDPGRPG-FSYPGPRGAPGEKGEPGPRGPEGGRGDFGLKGGPGR 550

Query: 214 NGMDGIP 220
            G  G P
Sbjct: 551 KGEKGEP 557



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 77/180 (42%), Gaps = 50/180 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPGV--- 144
           PG +GP G  GE G+ GE G +G +GE                         GAPG    
Sbjct: 348 PGNRGPDGYPGEAGSPGERGDQGGKGEPGRPGRRGPPGDSGAKGSKGYQGNDGAPGSPGL 407

Query: 145 ------------------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
                              G PG +G PG  G +G KGD G  GP+G+ G+ G +G KGD
Sbjct: 408 KGAKGGPGPRGPKGEPGRRGDPGSKGSPGINGTKGEKGDPGPEGPRGLAGEVGSKGAKGD 467

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR---NGMDGIPGKDGLPGKDGI--PGTNGTNGEK 241
            G PG  G  G  G PG+ G  G PG     G  G PG  G PG+ G   PG  G  GEK
Sbjct: 468 RGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGEK 527



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 62/117 (52%), Gaps = 12/117 (10%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           + GPPGP+G     G++G KG+MG PG      + G++G +GD G  G IG  G  G+  
Sbjct: 254 IPGPPGPKGY---RGQKGAKGNMGEPG------EPGQKGRQGDPGIEGPIGFPGPKGV-- 302

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG  G  G  G DG  G  GL GK+G  G  G  G  G  G +G+ G  G +G PG
Sbjct: 303 -PGFKGEKGEFGADGRKGASGLAGKNGTDGQKGKLGRIGPPGCKGDPGNRGPDGYPG 358



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 56/112 (50%), Gaps = 18/112 (16%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIP 220
           G PGP+G     G++G KG+MG PG  G  GR G P      G PG  G+PG  G  G  
Sbjct: 256 GPPGPKGY---RGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGVPGFKGEKGEF 312

Query: 221 GKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPA 263
           G DG  G  G+ G NGT+G+K         G  G  GNRG  G  G  G+P 
Sbjct: 313 GADGRKGASGLAGKNGTDGQKGKLGRIGPPGCKGDPGNRGPDGYPGEAGSPG 364



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 74/170 (43%), Gaps = 29/170 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEM------------GVKGERGEKGAPGVVGPPGPQGIP----- 154
           PG  G  G++G+ G KGE             G KG +G +G  G  G PG +G       
Sbjct: 357 PGEAGSPGERGDQGGKGEPGRPGRRGPPGDSGAKGSKGYQGNDGAPGSPGLKGAKGGPGP 416

Query: 155 ----------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                     GD G +G  G  G  G +G PG EG RG  G++G  G  G  G  G  G 
Sbjct: 417 RGPKGEPGRRGDPGSKGSPGINGTKGEKGDPGPEGPRGLAGEVGSKGAKGDRGLPGPRGP 476

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT--GPRGNRGK 252
            G  G PG+ G  G PG  G  G  G PG  G  G  G +  GPRG  G+
Sbjct: 477 QGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGE 526



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 15/85 (17%)

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP G  GY G+ G  G  G PGEPG  G   R G  GI G  G PG  G+PG        
Sbjct: 256 GPPGPKGYRGQKGAKGNMGEPGEPGQKG---RQGDPGIEGPIGFPGPKGVPGF------- 305

Query: 242 GMTGPRGNRGKSGINGVPGTPAICA 266
                +G +G+ G +G  G   +  
Sbjct: 306 -----KGEKGEFGADGRKGASGLAG 325


>gi|171544947|ref|NP_001116390.1| collagen type I alpha 1 precursor [Oryzias latipes]
 gi|158936960|dbj|BAF91497.1| collagen type I alpha 1 [Oryzias latipes]
          Length = 1446

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/171 (43%), Positives = 86/171 (50%), Gaps = 6/171 (3%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   +G   S     P G  GP G  G+ G  G  G  G RG+   PGV+G PGP+G  G
Sbjct: 517 LPGAKGMTGSPGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQ---PGVMGFPGPKGAAG 573

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D GK G +G MG  GP G PG +G  GP+G  G  G  G  G  G  G PG  G+PG  G
Sbjct: 574 DAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQG 633

Query: 216 MDGIPGK---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G PGK    GLPG  G PG  G  G++G  G RG  G  G  G  G+P 
Sbjct: 634 AIGEPGKPGEQGLPGDAGAPGLTGARGDRGFPGERGAPGPVGPAGARGSPG 684



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIP 154
             QG          PG  G  G  G+ GA G  G +G+RG   E+GAPG VGP G +G P
Sbjct: 624 GFQGLPGPQGAIGEPGKPGEQGLPGDAGAPGLTGARGDRGFPGERGAPGPVGPAGARGSP 683

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G  G KGD G PG  G  G  G +G  G+ G  G  GL G  G  G  G DG PG++
Sbjct: 684 GSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKD 743

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           G  G+ G  GLPG  G PG  G  G  G  GP G RG  G  G  G P    +
Sbjct: 744 GARGLTGPIGLPGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPAGF 796



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 84/164 (51%), Gaps = 6/164 (3%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G    T     PG  G  G +G  G  G  G +GE+G  GAPG  G PGPQG  G+ GK
Sbjct: 581 RGVMGPTGPAGAPGKDGDSGPQGPSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGK 640

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPK---GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
               G+ G PG  G PG  G RG +   G+ G PG +G  G  G PG  G DG  G  G 
Sbjct: 641 ---PGEQGLPGDAGAPGLTGARGDRGFPGERGAPGPVGPAGARGSPGSAGNDGAKGDAGA 697

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG  G PG  G+PG  G  G  G+ G RG++G  G +G PG
Sbjct: 698 PGAPGAQGPPGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPG 741



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 79/154 (51%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  GQ G +G  G  G  G+ G+ G  GV+GP GP G PG +G  GP+G  G  G
Sbjct: 550 PPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGPTGPAGAPGKDGDSGPQGPSGPSG 609

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           P G  G++G  G  G  G PG  G  G  G PGE GL G  G  G+ G  G  G PG+ G
Sbjct: 610 PAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQGLPGDAGAPGLTGARGDRGFPGERG 669

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PG  G  G +G  G  GN G  G  G PG P  
Sbjct: 670 APGPVGPAGARGSPGSAGNDGAKGDAGAPGAPGA 703



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 83/166 (50%), Gaps = 9/166 (5%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +G   +  E   PG QGP G  GE G +G  G  G  G +GAPG  G PG +G PG +
Sbjct: 423 GAKGEPGAKGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGARGAPGERGAPGGRGFPGSD 482

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
              GP G  G PG +G P   G  GPKG  G PGR    G  GLPG  G+ G PG  G D
Sbjct: 483 ---GPAGAKGAPGERGAP---GLVGPKGSTGEPGRT---GEPGLPGAKGMTGSPGSPGPD 533

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G PG+DG PG  G+ G +G  G  G  G  G  G  G P 
Sbjct: 534 GKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPG 579



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 84/169 (49%), Gaps = 3/169 (1%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMG 167
           P G  GP G++GE G  G  G +G  G +GA G  G PG QG+PGD G     G +GD G
Sbjct: 604 PSGPSGPAGERGEQGPAGAPGFQGLPGPQGAIGEPGKPGEQGLPGDAGAPGLTGARGDRG 663

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           +PG +G PG  G  G +G  G  G  G  G  G PG PG  G PG  GM G  G  GLPG
Sbjct: 664 FPGERGAPGPVGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAAGLPG 723

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
             G  G  G  G  G  G  G RG +G  G+PG       K E  +  P
Sbjct: 724 LRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGP 772



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/140 (47%), Positives = 80/140 (57%), Gaps = 9/140 (6%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           GE+G  G +GE GA G  G PG QG P   G+EGKRG +G+ G PG +G PG+   RG  
Sbjct: 417 GEVGAPGAKGEPGAKGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGARGAPGE---RGAP 473

Query: 185 GDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G  G+PG  G  G  G PGE   PGL G  G  G  G  G+ GLPG  G+ G+ G+ G  
Sbjct: 474 GGRGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGSPGPD 533

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G TGP G  G+ G  G PG+
Sbjct: 534 GKTGPAGAPGQDGRPGPPGS 553



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 87/205 (42%), Gaps = 33/205 (16%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   +G      E   PG  GP G +G  G+ G  G KG+ G  GAPG  GPPG QG+PG
Sbjct: 655 LTGARGDRGFPGERGAPGPVGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPG 714

Query: 156 DEGK------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG--- 206
           + G       RG +GD G  G  G PG +G RG  G +G PG  G  G  G PG  G   
Sbjct: 715 ERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPVG 774

Query: 207 ---LDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGM----------------- 243
                G PG  G  G PG  G    PG DG PG  G  GE G                  
Sbjct: 775 PAGARGAPGERGESGPPGPAGFAGPPGSDGQPGAKGEAGENGAKGDAGPPGPAGPTGAPG 834

Query: 244 -TGPRGNRGKSGINGVPGTPAICAY 267
             GP GN G  G  G  G P    +
Sbjct: 835 PQGPVGNTGAKGARGPAGPPGATGF 859



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 82/161 (50%), Gaps = 15/161 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G +G  G+ G  G KG  GE+GAPG+VGP G  G PG  G+ G  G  G  G 
Sbjct: 467 PGERGAPGGRGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGS 526

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK--------- 222
            G PG +GK GP G  G  GR G  G  G  G+PG+ G PG  G  G  GK         
Sbjct: 527 PGSPGPDGKTGPAGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKPGERGVMGP 586

Query: 223 ---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G PGKD   G +G  G  G +GP G RG+ G  G PG
Sbjct: 587 TGPAGAPGKD---GDSGPQGPSGPSGPAGERGEQGPAGAPG 624



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 86/206 (41%), Gaps = 57/206 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMG- 167
           PG  G  G KGE GA G +G  G RG  G  G  GPPGP G    PG +G+ G KG+ G 
Sbjct: 755 PGPAGAPGDKGEPGAAGPVGPAGARGAPGERGESGPPGPAGFAGPPGSDGQPGAKGEAGE 814

Query: 168 --------------------YPGPQGIPGDEGKRGPKG---DMGYPGRIGL--------- 195
                                 GP G  G +G RGP G     G+PG  G          
Sbjct: 815 NGAKGDAGPPGPAGPTGAPGPQGPVGNTGAKGARGPAGPPGATGFPGGAGRVGPPGPAGN 874

Query: 196 ---------------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
                                 G  G PGE G  G PG +G  G PG DG PG  G+PG 
Sbjct: 875 PGPPGPTGQAGKEGPKGNRGETGPAGRPGEVGAAGPPGPSGEKGSPGADGAPGSAGLPGP 934

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G++G+ G  G RG+ G  G+PG
Sbjct: 935 QGIAGQRGIVGLPGQRGERGFPGLPG 960



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 80/196 (40%), Gaps = 57/196 (29%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------------------------ 151
           G  GA+G  G  G RGE G PG  GP GP                               
Sbjct: 339 GPQGARGPEGPAGARGEPGNPGPAGPAGPSGNPGADGAAGAKGAPGAPGAAGAPGFPGPR 398

Query: 152 ---------------------GIPGDEGKRGPKGDMGYPGPQGIP---GDEGKRGPKGDM 187
                                G PG +G+ G KG+ G PG QG P   G+EGKRG +G+ 
Sbjct: 399 GPPGPQGAGGAPGPKGNNGEVGAPGAKGEPGAKGEAGAPGAQGPPGAHGEEGKRGARGEP 458

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G PG  G  G  G PG  G  G  G  G  G PG+ G P   G+ G  G+ GE G TG  
Sbjct: 459 GAPGARGAPGERGAPGGRGFPGSDGPAGAKGAPGERGAP---GLVGPKGSTGEPGRTGEP 515

Query: 248 GNRGKSGINGVPGTPA 263
           G  G  G+ G PG+P 
Sbjct: 516 GLPGAKGMTGSPGSPG 531



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 89/198 (44%), Gaps = 48/198 (24%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------VGPPGPQGIPGDEG 158
           PPGLQG  G++G  G  G  G +G++G KGA G             +G PGP G PGD+G
Sbjct: 706 PPGLQGMPGERGAAGLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKG 765

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP------- 211
           + G  G +G  G +G PG+ G+ GP G  G+ G  G DG+ G  GE G +G         
Sbjct: 766 EPGAAGPVGPAGARGAPGERGESGPPGPAGFAGPPGSDGQPGAKGEAGENGAKGDAGPPG 825

Query: 212 --------------GRNGMDGIPGKDGLPGKDGIPGTNG---------------TNGEKG 242
                         G  G  G  G  G PG  G PG  G                 G+ G
Sbjct: 826 PAGPTGAPGPQGPVGNTGAKGARGPAGPPGATGFPGGAGRVGPPGPAGNPGPPGPTGQAG 885

Query: 243 MTGPRGNRGKSGINGVPG 260
             GP+GNRG++G  G PG
Sbjct: 886 KEGPKGNRGETGPAGRPG 903



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 81/201 (40%), Gaps = 48/201 (23%)

Query: 89  NAYSRIPLVAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGER--------- 136
            A   +     +G      E  PPG     GP G  G+ GAKGE G  G +         
Sbjct: 768 GAAGPVGPAGARGAPGERGESGPPGPAGFAGPPGSDGQPGAKGEAGENGAKGDAGPPGPA 827

Query: 137 ---------------GEKGAPGVVGPPGPQGIPGDEG---------------------KR 160
                          G KGA G  GPPG  G PG  G                     K 
Sbjct: 828 GPTGAPGPQGPVGNTGAKGARGPAGPPGATGFPGGAGRVGPPGPAGNPGPPGPTGQAGKE 887

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GPKG+ G  GP G PG+ G  GP G  G  G  G DG  G  G PG  GI G+ G+ G+P
Sbjct: 888 GPKGNRGETGPAGRPGEVGAAGPPGPSGEKGSPGADGAPGSAGLPGPQGIAGQRGIVGLP 947

Query: 221 GKDGLPGKDGIPGTNGTNGEK 241
           G+ G  G  G+PG  G  G++
Sbjct: 948 GQRGERGFPGLPGPAGEVGKQ 968



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 15/132 (11%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PG +G PG +G+ G  G  G PG  G +G+ G  GEPG  G        G PG+ 
Sbjct: 417 GEVGAPGAKGEPGAKGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGA------RGAPGER 470

Query: 224 GLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G PG  G PG++G  G K         G+ GP+G+ G+ G  G PG P          S 
Sbjct: 471 GAPGGRGFPGSDGPAGAKGAPGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGSP 530

Query: 275 LPNSETSQLLIP 286
            P+ +T     P
Sbjct: 531 GPDGKTGPAGAP 542



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 46/91 (50%), Gaps = 9/91 (9%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
           GE GE G PG  G         + G  GP+G  G+PG  G+PG +G RG  G  G  G  
Sbjct: 213 GEDGESGKPGRAG---------ERGPPGPQGARGFPGTPGLPGIKGHRGFSGLDGAKGDT 263

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G  G PG +G PG  G  G+PG+ G
Sbjct: 264 GPAGPKGEAGTPGENGTPGAMGPRGLPGERG 294



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 83/237 (35%), Gaps = 87/237 (36%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGY 168
           PG++G  G  G  GAKG+ G  G +GE G PG  G PG   P+G+PG+ G+ GP G  G 
Sbjct: 245 PGIKGHRGFSGLDGAKGDTGPAGPKGEAGTPGENGTPGAMGPRGLPGERGRAGPSGAAGA 304

Query: 169 P---------------------------------GPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                             GPQG  G EG  G +G+ G PG  G 
Sbjct: 305 RGNDGAAGAAGPPGPTGPAGPPGFPGGPGAKGEIGPQGARGPEGPAGARGEPGNPGPAGP 364

Query: 196 DG------------------------------------------------RDGLPGEPGL 207
            G                                                 +G  G PG 
Sbjct: 365 AGPSGNPGADGAAGAKGAPGAPGAAGAPGFPGPRGPPGPQGAGGAPGPKGNNGEVGAPGA 424

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGT 261
            G PG  G  G PG  G PG  G  G  G  GE G  G R   G RG  G  G PG+
Sbjct: 425 KGEPGAKGEAGAPGAQGPPGAHGEEGKRGARGEPGAPGARGAPGERGAPGGRGFPGS 481



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 46/95 (48%), Gaps = 15/95 (15%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ GK G  G+ G PGPQG              G+PG  GL G  G  G  GLDG  G  
Sbjct: 216 GESGKPGRAGERGPPGPQGA------------RGFPGTPGLPGIKGHRGFSGLDGAKGDT 263

Query: 215 GMDGIPGKDGLPGKDGIPGT---NGTNGEKGMTGP 246
           G  G  G+ G PG++G PG     G  GE+G  GP
Sbjct: 264 GPAGPKGEAGTPGENGTPGAMGPRGLPGERGRAGP 298


>gi|291388581|ref|XP_002710673.1| PREDICTED: collagen, type XXII, alpha 1 [Oryctolagus cuniculus]
          Length = 1571

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 86/167 (51%), Gaps = 24/167 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G +G  G KG  G  G  G +G PG +GPPG +G+PG +G  GP G  G  G 
Sbjct: 1208 PGLPGPEGARGPPGFKGHTGDSGAPGPRGEPGAMGPPGQEGLPGKDGDTGPIGPQGPQGL 1267

Query: 172  QGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G+PG                 G++G KG+ G PG         LPG  G  G PG  G 
Sbjct: 1268 RGLPGKNGSPGSPGDPGPPGSPGQKGSKGENGSPG---------LPGFLGPRGPPGEAGE 1318

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+PGK+G PGK G PG  G  G+ G+ G +G  G  G  G PGTP 
Sbjct: 1319 KGVPGKEGAPGKPGDPGPRGERGDPGIKGDKGAPGGKGQPGDPGTPG 1365



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 62/128 (48%), Gaps = 22/128 (17%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG----VKGERGEKGAPGVVGPPGPQGIPGD 156
           GF  +    CPPG +G  G  G +G  G  G    ++GE+GEKG+ G+ GPPG  G  G 
Sbjct: 469 GFLKTINCSCPPGEKGEKGSSGPVGLPGLKGRGPFIQGEKGEKGSMGLPGPPGRDGSKGM 528

Query: 157 EGKRGPKGDMGYPGPQGI------------------PGDEGKRGPKGDMGYPGRIGLDGR 198
            G  G  G+ G PG  G+                  PG +G+RG KG  G  G  GLDG 
Sbjct: 529 RGLPGELGEPGLPGEVGVRGPPGPPGLPGLLGHVGAPGLQGERGEKGTPGEKGERGLDGF 588

Query: 199 DGLPGEPG 206
            G PGE G
Sbjct: 589 PGKPGEAG 596



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 64/141 (45%), Gaps = 36/141 (25%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GP G+PG +G+ G +G+       G+PG  G RG  G+ G  G+ G  G  GLPG PGL 
Sbjct: 738 GPPGLPGAKGEAGERGE------DGLPGKPGPRGEAGEQGLAGQPGEKGEAGLPGAPGLP 791

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG----------------------MTGP 246
           G  G NG  G  G  G       PG  G  GEKG                      M G 
Sbjct: 792 GTRGENGAQGEKGDQGW------PGLKGDRGEKGEAGPAGPPGPPGTTSLLTPHPRMPGE 845

Query: 247 RGNRGKSGINGVPGTP--AIC 265
           +G +G+ G  GVPG P  A+C
Sbjct: 846 QGPKGEKGDPGVPGEPVSALC 866



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 67/134 (50%), Gaps = 31/134 (23%)

Query: 134 GERGEKGAPGVVGPPGPQGI-PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           GE+GEKG+ G VG PG +G  P  +G++G KG MG PGP                  PGR
Sbjct: 481 GEKGEKGSSGPVGLPGLKGRGPFIQGEKGEKGSMGLPGP------------------PGR 522

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIP------------GKDGLPGKDGIPGTNGTNGE 240
            G  G  GLPGE G  G+PG  G+ G P            G  GL G+ G  GT G  GE
Sbjct: 523 DGSKGMRGLPGELGEPGLPGEVGVRGPPGPPGLPGLLGHVGAPGLQGERGEKGTPGEKGE 582

Query: 241 KGMTGPRGNRGKSG 254
           +G+ G  G  G++G
Sbjct: 583 RGLDGFPGKPGEAG 596



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 9/89 (10%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  GP G+PG +G+ G +G+ G PG+    G  G  GL G+      PG  G  G+PG  
Sbjct: 735 GLSGPPGLPGAKGEAGERGEDGLPGKPGPRGEAGEQGLAGQ------PGEKGEAGLPGAP 788

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
           GLPG  G  G  G  G++G  G +G+RG+
Sbjct: 789 GLPGTRGENGAQGEKGDQGWPGLKGDRGE 817



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 44/83 (53%), Gaps = 3/83 (3%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G KGE G+ G  G  G RG  G  G  G PG +G PG  G  GP+G+ G P   GI GD+
Sbjct: 1293 GSKGENGSPGLPGFLGPRGPPGEAGEKGVPGKEGAPGKPGDPGPRGERGDP---GIKGDK 1349

Query: 179  GKRGPKGDMGYPGRIGLDGRDGL 201
            G  G KG  G PG  G  G  GL
Sbjct: 1350 GAPGGKGQPGDPGTPGHKGHTGL 1372



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 12/70 (17%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           GL G  GLPG           G  G  G+DGLPGK   PG  G  GE+G+ G  G +G++
Sbjct: 735 GLSGPPGLPGA---------KGEAGERGEDGLPGK---PGPRGEAGEQGLAGQPGEKGEA 782

Query: 254 GINGVPGTPA 263
           G+ G PG P 
Sbjct: 783 GLPGAPGLPG 792



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 83/213 (38%), Gaps = 70/213 (32%)

Query: 111 PPGLQGPIGQKGEIGA------------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
           PPGL G  G+ GE G              GE G+ G+ GEKG  G+ G PG  G  G+ G
Sbjct: 739 PPGLPGAKGEAGERGEDGLPGKPGPRGEAGEQGLAGQPGEKGEAGLPGAPGLPGTRGENG 798

Query: 159 KRGPKGDMGYPGPQG----------------------------IPGDEGKRGPKGDMGYP 190
            +G KGD G+PG +G                            +PG++G +G KGD G P
Sbjct: 799 AQGEKGDQGWPGLKGDRGEKGEAGPAGPPGPPGTTSLLTPHPRMPGEQGPKGEKGDPGVP 858

Query: 191 GRIGLDGRDGLPG-----------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPG------ 233
           G   +     LPG            PG  G  G  G  G  G  G PG  G PG      
Sbjct: 859 GEP-VSALCPLPGYLETRSALGLSSPGAKGQEGAQGAPGAAGNPGAPGPVGSPGLSGPPG 917

Query: 234 ------------TNGTNGEKGMTGPRGNRGKSG 254
                        +G  GEKG  G  GN G +G
Sbjct: 918 SVGPPGLRGPPGKDGERGEKGAAGEDGNPGPAG 950



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 74/206 (35%), Gaps = 85/206 (41%)

Query: 128  GEMGVKGERGEKGAPGVVGP--------------------PGPQGIPGDEGKRGPKGDMG 167
            GE G KG  GE G PG  GP                    PG +G PG  G  G KGD G
Sbjct: 932  GERGEKGAAGEDGNPGPAGPRGDPGAPGLPGPPGEGKDGEPGLRGSPGLPGPMGTKGDQG 991

Query: 168  YPGPQGIPGDEGKRGPKG-----------------------DMGYPGRIGLDGRDGLPGE 204
             P   GIPG  G RG  G                         G+PG  G  G+DG PG 
Sbjct: 992  AP---GIPGSPGSRGDPGIGVAGPPGPSGPPGDKGPPGPRGLPGFPGPQGPAGQDGAPGN 1048

Query: 205  PGLDGIPGR---------------------------------------NGMDGIPGKDGL 225
            PG  G PG+                                        G+ G PG++G 
Sbjct: 1049 PGERGPPGKPGPSARLSPEDINLLVKDVCSDCPPGPPGLPGLPGFKGDKGLPGKPGREGP 1108

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRG 251
             GK G PG  GT+GE G  G +G+ G
Sbjct: 1109 EGKKGSPGERGTDGEVGQKGDQGHPG 1134


>gi|4538570|emb|CAA40203.2| Non-fibrillar collagen EmC13 [Ephydatia muelleri]
          Length = 422

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 93/197 (47%), Gaps = 38/197 (19%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +G+KG PG  G PG  G PG +G +G KGD+G PGPQG  GD+   GPKGD GY      
Sbjct: 125 KGDKGLPGNDGQPGAPGAPGYDGAKGDKGDIGAPGPQGPKGDQ---GPKGDQGY------ 175

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN----------------- 238
            G  GLPG+PG  G PG++G DG  G  G  G  G PG  G +                 
Sbjct: 176 KGDAGLPGQPGQTGAPGKDGQDGAKGDKGDQGPAGTPGAPGKDGAQGPAGPAGPAGPAGP 235

Query: 239 ----GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEH 294
               G +G  GP+G+ G  G  G PG+     Y R   ++ P  ET+        V S H
Sbjct: 236 VGPTGPQGPQGPKGDVGPRGPQGAPGSNGAVVYIRWGNNVCPAGETN--------VYSGH 287

Query: 295 IFSSSPIVVREGDNVRL 311
           I  SS      GD + L
Sbjct: 288 IVESSNANDANGDYLCL 304



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 74/191 (38%), Gaps = 67/191 (35%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---- 189
           G  G  GAPG+ GP   +G+PG +G +G KGD G  GPQG+ G  G  G KGD G     
Sbjct: 29  GYPGPAGAPGLTGP---KGLPGPQGPKGDKGDTGPKGPQGVAGPPGIDGAKGDKGECFYP 85

Query: 190 ------------------------------------------PGRIGLDGRDGLPGEPGL 207
                                                      G  G DG+ G PG PG 
Sbjct: 86  PPPTCPTCPAGPKGAPGPQGAPGAPGAPGLPGPAGPQGPKGDKGLPGNDGQPGAPGAPGY 145

Query: 208 DGIPGRNGMDGIPGKD------------------GLPGKDGIPGTNGTNGEKGMTGPRGN 249
           DG  G  G  G PG                    GLPG+ G  G  G +G+ G  G +G+
Sbjct: 146 DGAKGDKGDIGAPGPQGPKGDQGPKGDQGYKGDAGLPGQPGQTGAPGKDGQDGAKGDKGD 205

Query: 250 RGKSGINGVPG 260
           +G +G  G PG
Sbjct: 206 QGPAGTPGAPG 216


>gi|6753484|ref|NP_034063.1| collagen alpha-1(VI) chain precursor [Mus musculus]
 gi|543913|sp|Q04857.1|CO6A1_MOUSE RecName: Full=Collagen alpha-1(VI) chain; Flags: Precursor
 gi|50479|emb|CAA47032.1| collagen alpha1 type VI-precursor [Mus musculus]
 gi|148699892|gb|EDL31839.1| procollagen, type VI, alpha 1, isoform CRA_a [Mus musculus]
 gi|162318378|gb|AAI56501.1| Collagen, type VI, alpha 1 [synthetic construct]
 gi|225000678|gb|AAI72708.1| Collagen, type VI, alpha 1 [synthetic construct]
          Length = 1025

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 66/121 (54%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GE+G PG+ G  G  G PG  G  GP G  G  G +G  G++G RGPKG  G  G+ G+D
Sbjct: 268 GERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGID 327

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G DG+ GE G  G+PG  G  G  G  G PG  G  G  G  GEKG  G  G  G+ G +
Sbjct: 328 GVDGMKGETGYPGLPGCKGSPGFDGIQGPPGPKGDAGAFGMKGEKGEAGADGEAGRPGNS 387

Query: 257 G 257
           G
Sbjct: 388 G 388



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 85/205 (41%), Gaps = 64/205 (31%)

Query: 113 GLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGP---------------------- 147
           G+QGP G KG+ GA   KGE G  G  GE G PG  G                       
Sbjct: 352 GIQGPPGPKGDAGAFGMKGEKGEAGADGEAGRPGNSGSPGDEGDPGEPGPPGEKGEAGDE 411

Query: 148 -----------------------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
                                  PG +G  GD G+ GP+GD G  GP GIPGD G+ GP 
Sbjct: 412 GNAGPDGAPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPVGIPGDSGEAGPI 471

Query: 185 GDMGYPGRIGLDGRDGLP---------------GEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  GY G  G  G +GL                GE G DG PG NG +G PG  G PG  
Sbjct: 472 GPKGYRGDEGPPGPEGLRGAPGPVGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYPGNR 530

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSG 254
           G PG NGT G  G+ G  G  G  G
Sbjct: 531 GPPGLNGTKGYPGLKGDEGEVGDPG 555



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 84/190 (44%), Gaps = 30/190 (15%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      E   PG  G +G  G  G KGE G +GE+G +G  G  G  G +GI G +G +
Sbjct: 274 GLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMK 333

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----- 215
           G  G  G PG +G PG +G +GP G  G  G  G+ G  G  G  G  G PG +G     
Sbjct: 334 GETGYPGLPGCKGSPGFDGIQGPPGPKGDAGAFGMKGEKGEAGADGEAGRPGNSGSPGDE 393

Query: 216 ----------MDGIPGKDGLPGKDGI---------------PGTNGTNGEKGMTGPRGNR 250
                       G  G +G  G DG                PG  G  G+ G  GP+G++
Sbjct: 394 GDPGEPGPPGEKGEAGDEGNAGPDGAPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQ 453

Query: 251 GKSGINGVPG 260
           G+ G  G+PG
Sbjct: 454 GREGPVGIPG 463



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 76/149 (51%), Gaps = 18/149 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD 165
           PG++GP G  GE G +G+ G +G  G  G  G  GP GP+G       PG EG RG  G 
Sbjct: 435 PGVRGPRGDPGEAGPQGDQGREGPVGIPGDSGEAGPIGPKGYRGDEGPPGPEGLRGAPGP 494

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G PG  G+ G+ G+ GP G+       G +G  G PG PG  G PG NG  G PG  G 
Sbjct: 495 VGPPGDPGLMGERGEDGPPGN-------GTEGFPGFPGYPGNRGPPGLNGTKGYPGLKGD 547

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G+ G PG +  +       PRG +G  G
Sbjct: 548 EGEVGDPGEDNND-----ISPRGVKGAKG 571


>gi|402896585|ref|XP_003911374.1| PREDICTED: collagen alpha-1(XXVII) chain [Papio anubis]
          Length = 1859

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 92/167 (55%), Gaps = 16/167 (9%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G EG +G +G  G 
Sbjct: 1353 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGA 1412

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
            PGR G+ G  GLPG     G+ GR G++GI G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 1413 PGRRGVQGLQGLPGP---RGVVGRQGLEGIAGADGLPGRDGQVGQQGEQGDDGDPGPMGP 1469

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
             G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 1470 AGKRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1509



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 87/162 (53%), Gaps = 21/162 (12%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYPGPQGI 174
           K   GAKG+MG+ G  G  G PG  G    PGP G PG++G+ GP+G     GYPG QG+
Sbjct: 683 KAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGL 742

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G  GPKG  GY G  GL G  G  GE GL G+PG+ G  G+PG  G+ G+ G PG 
Sbjct: 743 PGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGL 802

Query: 235 NGTNGEK---------------GMTGPRGNRGKSGINGVPGT 261
           +G  GE                G+ GP G  G  G+ G+ G+
Sbjct: 803 DGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGS 844



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 83/163 (50%), Gaps = 24/163 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+ G+ G  G+ GV+G RG+ G  G  G PGP+G PG +G +G +G  G    QG  G  
Sbjct: 1357 GEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGK---QGKAGAP 1413

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---------------------GMD 217
            G+RG +G  G PG  G+ GR GL G  G DG+PGR+                     G  
Sbjct: 1414 GRRGVQGLQGLPGPRGVVGRQGLEGIAGADGLPGRDGQVGQQGEQGDDGDPGPMGPAGKR 1473

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG  GLPG  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1474 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLPG 1516



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 94/205 (45%), Gaps = 45/205 (21%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP------GVVGPPGPQ 151
             +QG      +   PG  GP G+ G  G+KG  G KG++G+ GAP      G+ G PGP+
Sbjct: 1369 GVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPR 1428

Query: 152  GIPGDE------------------------------------GKRGPKGDMGYPGPQGIP 175
            G+ G +                                    GKRG  G  G PG QG P
Sbjct: 1429 GVVGRQGLEGIAGADGLPGRDGQVGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1488

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G +G+ G  G +G PG+ G +GR GLP   GEPG  G PG  G  G PG  GL G  G P
Sbjct: 1489 GFKGESGLPGQLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDTGEMGFPGMAGLFGPKGPP 1548

Query: 233  GTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G +G  GP G  GK GI G
Sbjct: 1549 GDIGFKGIQGPRGPPGLMGKEGIIG 1573



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG +GPPG         KRG +G  G 
Sbjct: 1464 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGRTGL 1514

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 1515 PGNQGEPGSKGQPGDTGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGP 1574

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1575 LGILGPSGLPGPKGDKGSRGDWG 1597



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 94/189 (49%), Gaps = 42/189 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KG +G+ GE G+KG++GE+G PGV       G PG +G +G +G  G+PG +
Sbjct: 831  GYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGV------SGDPGFQGDKGSQGLPGFPGAR 884

Query: 173  GIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-- 215
            G PG  GK G KG               D+G PG    +G +G+ G+PG  G+PG  G  
Sbjct: 885  GKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGD---NGPEGMKGKPGARGLPGPRGQL 941

Query: 216  ----------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                            ++G PG+ G PG+ G+ G  G  G+ G  GP G +G  G  G+ 
Sbjct: 942  GPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIGLV 1001

Query: 260  GTPAICAYK 268
            G P I   K
Sbjct: 1002 GEPGIVGEK 1010



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 76/144 (52%), Gaps = 12/144 (8%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++G
Sbjct: 673 QKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQG 723

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 724 QPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 783

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G RG  G++G PG
Sbjct: 784 KMGMPGFPGVFGERGPPGLDGNPG 807



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 701 PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGL 760

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN----------- 214
           PG  G+PG +G+RG  G  G  G++G+ G  G+ GE   PGLDG PG             
Sbjct: 761 PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGL 820

Query: 215 -GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G PG  G+ G  G+ GE G+ G +G +G  G++G PG
Sbjct: 821 IGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 867



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 83/187 (44%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPK--------- 163
           GP G +G IG  G  G+ G  GE+G PGV G  G  G+PG     G+RGP          
Sbjct: 750 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGEL 809

Query: 164 ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                       GD+G  GP G PG +G +G  G +G PG  G  G  G+P   G+PG  
Sbjct: 810 GLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQ 869

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKS 253
           G  G  G+ G PG  G PG  G  G  G+                G  G  GP G +GK 
Sbjct: 870 GDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 929

Query: 254 GINGVPG 260
           G  G+PG
Sbjct: 930 GARGLPG 936



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 78/205 (38%), Gaps = 64/205 (31%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVV------------------------GPPGPQGIPGD 156
            +G  G  G+ G KG  G KGA G                          G  GP G PG 
Sbjct: 1238 RGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGR 1297

Query: 157  EGKRGPKGDMGYPGPQGI----------------------------------PGDEGKRG 182
             G +G  G  GY G +GI                                   GD G RG
Sbjct: 1298 MGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRG 1357

Query: 183  PKGDMGYPGRIGLD------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
              GD GYPG+ G+       G+ G PG PG  G PG  G  G  G  G  GK G PG  G
Sbjct: 1358 EPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRG 1417

Query: 237  TNGEKGMTGPRGNRGKSGINGVPGT 261
              G +G+ GPRG  G+ G+ G+ G 
Sbjct: 1418 VQGLQGLPGPRGVVGRQGLEGIAGA 1442



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 90/240 (37%), Gaps = 82/240 (34%)

Query: 100  QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------- 146
            QG      E   PGL+G   P+G  G  G +G+ G  GE GEKG  G++G          
Sbjct: 1178 QGLIGQRGE---PGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGV 1234

Query: 147  -----PPGPQGIPGDEGKRGPKGDMGYP---------------------------GPQGI 174
                 P G  G  G++G+ G KG  GY                            GP G 
Sbjct: 1235 TGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGA 1294

Query: 175  PGDEGKRGPKGDMGYPGRIGL---------------DGRDGLP----------------- 202
            PG  G +G  G  GY G  G+                G DG                   
Sbjct: 1295 PGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRG 1354

Query: 203  --GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              GEPG  G PG+ G+ G+ GK G  G+ G PG  G  G KG  G  G +GK G  G PG
Sbjct: 1355 DRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPG 1414



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 71/174 (40%), Gaps = 60/174 (34%)

Query: 144 VVGPPGPQG------------------------------------------IPGDEG--- 158
           ++GPPGP+G                                            GD G   
Sbjct: 622 LMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSP 681

Query: 159 ---KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPG 212
                G KGDMG PG  G PG  G+   KG  GYPG  G  G  G P   G PG  G PG
Sbjct: 682 GKAHDGAKGDMGLPGLSGNPGPPGR---KGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPG 738

Query: 213 RNGMDGI---PGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           R G+ G    PG  G  G  G+P   G  G++GE+G+ G  G RGK G+ G PG
Sbjct: 739 RQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPG 792



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 68/159 (42%), Gaps = 39/159 (24%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 1157 PGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGE 1216

Query: 169  PGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEP-------- 205
             G +G+ G+               EGK G +G+ G  G  G  G  G  GE         
Sbjct: 1217 KGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGP 1276

Query: 206  -------------GLDGIPGRNGMDGIPGKDGLPGKDGI 231
                         G  G PGR G  G PG  G  G  GI
Sbjct: 1277 PGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGI 1315



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 54/101 (53%), Gaps = 12/101 (11%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G+ G  G +GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 1499 QLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDTGEMGFPGMAGLFGPKGPPGDIGFKGIQG 1558

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLD 196
             RGP G MG     GP GI G  G  GPKGD G  G  GL 
Sbjct: 1559 PRGPPGLMGKEGIIGPLGILGPSGLPGPKGDKGSRGDWGLQ 1599



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 30/143 (20%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  GA GE G+ GE G KG  G      P G PG++G  G +G+         PG 
Sbjct: 1145 MGPKGPPGAAGEPGLPGEAGMKGDLG------PLGTPGEQGLIGQRGE---------PGL 1189

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GI 231
            EG  GP         +G DG  G  G+PG DG  G  G +G+ G+DG PG        G 
Sbjct: 1190 EGDSGP---------MGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGP 1240

Query: 232  PGTNGTNGEKGMTGPRGNRGKSG 254
             G +G  GEKG TG +G +G  G
Sbjct: 1241 EGKSGKQGEKGRTGAKGAKGYQG 1263



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 18/105 (17%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKG---------APGVVGPPGPQGIPGDEGKRG 161
            PPG  GP G KG+ GA+G  G +G+ G +G         APG+ G PG +G PG  G  G
Sbjct: 916  PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDG 975

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             KG+         PGD G+ GP G+ G+ G IGL G  G+ GE G
Sbjct: 976  VKGE---------PGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKG 1011


>gi|363736914|ref|XP_422363.3| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(XXIV) chain
           [Gallus gallus]
          Length = 1808

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 88/177 (49%), Gaps = 33/177 (18%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKG 164
           P G  GP G KG+ G KG MG++G RGE+G PG+      VG PG QG+ G EG  GPKG
Sbjct: 649 PIGFSGPPGIKGQKGHKGFMGLQGPRGEQGVPGMAGNVGAVGYPGRQGLAGPEGNPGPKG 708

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------ 206
             G+ GP G+ G  G  G +G  G+ G+ G  GR G PG+ G                  
Sbjct: 709 ARGFIGPPGVAGQRGSEGERGIPGFHGKRGPKGRQGFPGDFGDRGPPGPDGNPGIVGGVG 768

Query: 207 ------LDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                 L G  G  G+    GIPG  GLPG  G PG  G  GE G+ G  G++G  G
Sbjct: 769 PPGFPGLRGDVGPEGLRGPSGIPGPMGLPGNMGQPGMKGDKGEHGLAGDPGDQGYPG 825



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/170 (45%), Positives = 90/170 (52%), Gaps = 13/170 (7%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL+G IGQ+G   E G  GE GVKGERG KG     G  G  G  GIPG  G  G KG 
Sbjct: 1326 PGLRGQIGQQGPPGEPGELGEQGVKGERGSKGPTGKKGATGQAGKPGIPGKPGPAGQKGA 1385

Query: 166  MGYPGPQGIPGDEGKRG-------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            +GYPGP+GIPG+ GK G       P G+ G PG  GL G  G  G  GL G+PG  G  G
Sbjct: 1386 VGYPGPEGIPGNPGKPGPPGEQSLPXGNKGSPGLAGLAGYPGARGPKGLPGMPGPMGAPG 1445

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            + G +GL G  G  G  G  G +G  GP G  G  G  G  G   +  ++
Sbjct: 1446 LKGAEGLQGHPGKRGKRGHPGSQGDQGPAGEVGAKGQTGEDGDQGLMGFQ 1495



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 89/177 (50%), Gaps = 12/177 (6%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGP 147
            + + G   +T +  P G  GP GQ G+ GA G+MG +G          +GE G  G  GP
Sbjct: 1067 LGLPGPPGTTGDRGPMGETGPRGQPGDAGAIGDMGFEGPPGPEGEPGLQGEPGTKGDAGP 1126

Query: 148  PGPQGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             G  G PGD+G R   GP G+ G  G  G  G+ G++G  G+ G  G +G  G  G PGE
Sbjct: 1127 AGKAGEPGDQGLRGEPGPPGEDGVQGRDGPKGEPGEQGLHGEAGEKGEMGTPGSAGPPGE 1186

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG+ G PG  G  G PG+ G  GK G  G  G  GE G  G  G  GK G  G  GT
Sbjct: 1187 PGIMGAPGPEGTPGNPGQRGRLGKKGEKGQLGPPGEIGPAGGSGQHGKIGPKGARGT 1243



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 95/208 (45%), Gaps = 36/208 (17%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            +GP G  G +G  G  GVKGERG+   PG  G PG  G  G+ G+RG +G +G PGP G 
Sbjct: 1019 RGPRGIDGPLGETGTQGVKGERGD---PGKKGTPGLIGKAGNPGQRGDQGALGLPGPPGT 1075

Query: 175  PGDE---GKRGPK---------GDMGYP------------------GRIGLDGRDGLPGE 204
             GD    G+ GP+         GDMG+                   G  G  G+ G PG+
Sbjct: 1076 TGDRGPMGETGPRGQPGDAGAIGDMGFEGPPGPEGEPGLQGEPGTKGDAGPAGKAGEPGD 1135

Query: 205  PGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             GL G PG  G DG+ G+D   G PG+ G+ G  G  GE G  G  G  G+ GI G PG 
Sbjct: 1136 QGLRGEPGPPGEDGVQGRDGPKGEPGEQGLHGEAGEKGEMGTPGSAGPPGEPGIMGAPGP 1195

Query: 262  PAICAYKRESCSLLPNSETSQLLIPPTI 289
                    +   L    E  QL  P  I
Sbjct: 1196 EGTPGNPGQRGRLGKKGEKGQLGPPGEI 1223



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 91/204 (44%), Gaps = 54/204 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGE---------------MGVKGERGEKGAPGVVGPPG------ 149
            P G+ GP+G+ G  G KGE                G  G+RG++GA G+ GPPG      
Sbjct: 1021 PRGIDGPLGETGTQGVKGERGDPGKKGTPGLIGKAGNPGQRGDQGALGLPGPPGTTGDRG 1080

Query: 150  ------PQGIPGD---------------------EGKRGPKGDMGYPGPQGIPGDEGKRG 182
                  P+G PGD                     +G+ G KGD G  G  G PGD+G RG
Sbjct: 1081 PMGETGPRGQPGDAGAIGDMGFEGPPGPEGEPGLQGEPGTKGDAGPAGKAGEPGDQGLRG 1140

Query: 183  PKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
               + G PG  G+ GRDG  GEP   GL G  G  G  G PG  G PG+ GI G  G  G
Sbjct: 1141 ---EPGPPGEDGVQGRDGPKGEPGEQGLHGEAGEKGEMGTPGSAGPPGEPGIMGAPGPEG 1197

Query: 240  EKGMTGPRGNRGKSGINGVPGTPA 263
              G  G RG  GK G  G  G P 
Sbjct: 1198 TPGNPGQRGRLGKKGEKGQLGPPG 1221



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 83/176 (47%), Gaps = 39/176 (22%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------VVGPPGPQG------ 152
           P GL G +GQ G  G KGE G+ G+ G++G PG            + G PGPQG      
Sbjct: 793 PMGLPGNMGQPGMKGDKGEHGLAGDPGDQGYPGDKGAPGSPGPPGIRGKPGPQGKIGDPG 852

Query: 153 ------------------IPGDEGKRGPKG---DMGYPGPQGIPGDEGKRGPKGDMGYPG 191
                             +PG  G  GPKG   D G PGPQG  G EG+ GP G +G  G
Sbjct: 853 SQGPLGPPGPEGFPGDIGVPGLNGPEGPKGLLGDRGSPGPQGPKGVEGEVGPAGPIGAVG 912

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
             G  G+ G  GEPG +G+ G  G  G  GK G  G  G+PG  G++G  G  G R
Sbjct: 913 PRGKPGQKGYVGEPGPEGLKGEQGDQGNIGKTGEAGSAGLPGETGSSGSLGEKGER 968



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 74/143 (51%), Gaps = 9/143 (6%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           +G  G+ G  G  G PG+ GP GP+G PG    + KRG KGD G  G  G PG +G++G 
Sbjct: 605 RGPRGMPGPHGNPGLPGLPGPKGPKGDPGFSPGKAKRGEKGDPGPIGFSGPPGIKGQKGH 664

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------GIPGKDGLPGKDGIPGTNGT 237
           KG MG  G  G  G  G+ G  G  G PGR G+       G  G  G  G  G+ G  G+
Sbjct: 665 KGFMGLQGPRGEQGVPGMAGNVGAVGYPGRQGLAGPEGNPGPKGARGFIGPPGVAGQRGS 724

Query: 238 NGEKGMTGPRGNRGKSGINGVPG 260
            GE+G+ G  G RG  G  G PG
Sbjct: 725 EGERGIPGFHGKRGPKGRQGFPG 747



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 76/148 (51%), Gaps = 9/148 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL    G  G  GA+G  G+ G  G  GAPG+ G  G QG PG  GKRG  G  G  GP
Sbjct: 1417 PGL---AGLAGYPGARGPKGLPGMPGPMGAPGLKGAEGLQGHPGKRGKRGHPGSQGDQGP 1473

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGL 225
             G  G +G+ G  GD G  G  G  G  G  G+ GL GI       G+ G  G  G++G+
Sbjct: 1474 AGEVGAKGQTGEDGDQGLMGFQGFPGPKGPAGDVGLVGILGPKGPTGQIGYSGPVGQEGI 1533

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
             G  G PG  G  G +G  GP+G RG++
Sbjct: 1534 TGPTGRPGPRGEKGTRGEMGPQGPRGQT 1561



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 88/203 (43%), Gaps = 54/203 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QGP G +GE+G  G +G  G RG+ G  G VG PGP+G+ G++G +G  G  G  G 
Sbjct: 890  PGPQGPKGVEGEVGPAGPIGAVGPRGKPGQKGYVGEPGPEGLKGEQGDQGNIGKTGEAGS 949

Query: 172  QGIPGDEGKRGP------------------KGDMGY------------------------ 189
             G+PG+ G  G                   KG MGY                        
Sbjct: 950  AGLPGETGSSGSLGEKGERGSPGPVGPPGEKGVMGYIGPPGGPGPVGPEGIPGPSGTRGP 1009

Query: 190  ------PGRIGLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGLPGKDGIPGTNGT 237
                   GR G  G DG  GE G  G+      PG+ G  G+ GK G PG+ G  G  G 
Sbjct: 1010 PGPQGPKGRRGPRGIDGPLGETGTQGVKGERGDPGKKGTPGLIGKAGNPGQRGDQGALGL 1069

Query: 238  NGEKGMTGPRGNRGKSGINGVPG 260
             G  G TG RG  G++G  G PG
Sbjct: 1070 PGPPGTTGDRGPMGETGPRGQPG 1092



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 92/235 (39%), Gaps = 72/235 (30%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-------- 149
              G      E   PG+ G +G  G  G +G  G +G  G KGA G +GPPG        
Sbjct: 666 GFMGLQGPRGEQGVPGMAGNVGAVGYPGRQGLAGPEGNPGPKGARGFIGPPGVAGQRGSE 725

Query: 150 -PQGIPGDEGKRGPKGDMGYPGP---------------------------QGIPGDEGKR 181
             +GIPG  GKRGPKG  G+PG                            +G  G EG R
Sbjct: 726 GERGIPGFHGKRGPKGRQGFPGDFGDRGPPGPDGNPGIVGGVGPPGFPGLRGDVGPEGLR 785

Query: 182 GPK---GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG------------IPGKDGLP 226
           GP    G MG PG +G  G  G  GE GL G PG  G  G            I GK G  
Sbjct: 786 GPSGIPGPMGLPGNMGQPGMKGDKGEHGLAGDPGDQGYPGDKGAPGSPGPPGIRGKPGPQ 845

Query: 227 GK---------------------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           GK                      G+PG NG  G KG+ G RG+ G  G  GV G
Sbjct: 846 GKIGDPGSQGPLGPPGPEGFPGDIGVPGLNGPEGPKGLLGDRGSPGPQGPKGVEG 900



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 89/220 (40%), Gaps = 67/220 (30%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPKG 164
            P G  G  G  GE G KGEMG  G  G  G PG++G PGP+G PG+ G+R      G KG
Sbjct: 1156 PKGEPGEQGLHGEAGEKGEMGTPGSAGPPGEPGIMGAPGPEGTPGNPGQRGRLGKKGEKG 1215

Query: 165  DMGYP---GPQGIPGDEGKRGPKGDMG------------------YPGRIG--------- 194
             +G P   GP G  G  GK GPKG  G                   PG  G         
Sbjct: 1216 QLGPPGEIGPAGGSGQHGKIGPKGARGTRGPLGHPGGMGPGGELGIPGYGGHQGPAGPSG 1275

Query: 195  ---LDGRDGLPGE-------------------------PGLDGIPGRNGMDGIP---GKD 223
                 G  G PGE                         PG +G  G  G+ G+    G+ 
Sbjct: 1276 PPGPKGEKGYPGEDSTVLGPPGPIGEPGPTGERGDRGEPGDEGYKGHIGLPGLRGQIGQQ 1335

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G PG+ G  G  G  GE+G  GP G +G +G  G PG P 
Sbjct: 1336 GPPGEPGELGEQGVKGERGSKGPTGKKGATGQAGKPGIPG 1375



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 67/132 (50%), Gaps = 9/132 (6%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPKGDMG 188
           +RG +G PG  G PG   +PG  G +GPKGD G+       G +G PG  G  GP G  G
Sbjct: 604 KRGPRGMPGPHGNPG---LPGLPGPKGPKGDPGFSPGKAKRGEKGDPGPIGFSGPPGIKG 660

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G  G  G  G  GE G+ G+ G  G  G PG+ GL G +G PG  G  G  G  G  G
Sbjct: 661 QKGHKGFMGLQGPRGEQGVPGMAGNVGAVGYPGRQGLAGPEGNPGPKGARGFIGPPGVAG 720

Query: 249 NRGKSGINGVPG 260
            RG  G  G+PG
Sbjct: 721 QRGSEGERGIPG 732



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 76/161 (47%), Gaps = 22/161 (13%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            E G +GE G +G +G  G PG+ G  G QG PG+ G+ G +G  G  G +G  G +G  G
Sbjct: 1307 ERGDRGEPGDEGYKGHIGLPGLRGQIGQQGPPGEPGELGEQGVKGERGSKGPTGKKGATG 1366

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLD----------------------GIPGRNGMDGIP 220
              G  G PG+ G  G+ G  G PG +                      G PG  G+ G P
Sbjct: 1367 QAGKPGIPGKPGPAGQKGAVGYPGPEGIPGNPGKPGPPGEQSLPXGNKGSPGLAGLAGYP 1426

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G  G+PG  G  G KG  G +G+ GK G  G PG+
Sbjct: 1427 GARGPKGLPGMPGPMGAPGLKGAEGLQGHPGKRGKRGHPGS 1467



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 89/204 (43%), Gaps = 59/204 (28%)

Query: 112 PGLQGPIGQKGEIG-AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKG 164
           PGL GP G KG+ G + G    K +RGEKG PG +G  GP GI G +G +G      P+G
Sbjct: 620 PGLPGPKGPKGDPGFSPG----KAKRGEKGDPGPIGFSGPPGIKGQKGHKGFMGLQGPRG 675

Query: 165 DMGYPG------PQGIPGDEGKRGPKGD---------MGYPGRIGLDGRDGLPGEPGLDG 209
           + G PG        G PG +G  GP+G+         +G PG  G  G +G  G PG  G
Sbjct: 676 EQGVPGMAGNVGAVGYPGRQGLAGPEGNPGPKGARGFIGPPGVAGQRGSEGERGIPGFHG 735

Query: 210 IPGRNGMDGIPGK---------------------------------DGLPGKDGIPGTNG 236
             G  G  G PG                                  +GL G  GIPG  G
Sbjct: 736 KRGPKGRQGFPGDFGDRGPPGPDGNPGIVGGVGPPGFPGLRGDVGPEGLRGPSGIPGPMG 795

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G +G++G+ G+ G PG
Sbjct: 796 LPGNMGQPGMKGDKGEHGLAGDPG 819



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 87/227 (38%), Gaps = 64/227 (28%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGA------------KGEMGVKGERGEKGAPGVV 145
             + G      E   PG  GP G+ G +GA            +G +G KGE+G+ G PG +
Sbjct: 1164 GLHGEAGEKGEMGTPGSAGPPGEPGIMGAPGPEGTPGNPGQRGRLGKKGEKGQLGPPGEI 1223

Query: 146  GPPGPQGIPGDEGKRGPKGDM------------------GYPGPQ--------------- 172
            GP G  G  G  G +G +G                    GY G Q               
Sbjct: 1224 GPAGGSGQHGKIGPKGARGTRGPLGHPGGMGPGGELGIPGYGGHQGPAGPSGPPGPKGEK 1283

Query: 173  GIPGDE-------------------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G PG++                   G RG  GD GY G IGL G  G  G+ G  G PG 
Sbjct: 1284 GYPGEDSTVLGPPGPIGEPGPTGERGDRGEPGDEGYKGHIGLPGLRGQIGQQGPPGEPGE 1343

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+ G+ G  G  G  G  G  G+ G+ G  G  G+ G  G PG
Sbjct: 1344 LGEQGVKGERGSKGPTGKKGATGQAGKPGIPGKPGPAGQKGAVGYPG 1390



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 58/109 (53%), Gaps = 6/109 (5%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIP 154
             +QG      +   PG QG  G  GE+GAKG+ G  G++G  G  G  GP GP    G+ 
Sbjct: 1451 GLQGHPGKRGKRGHPGSQGDQGPAGEVGAKGQTGEDGDQGLMGFQGFPGPKGPAGDVGLV 1510

Query: 155  GDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            G  G +GP G +GY GP   +GI G  G+ GP+G+ G  G +G  G  G
Sbjct: 1511 GILGPKGPTGQIGYSGPVGQEGITGPTGRPGPRGEKGTRGEMGPQGPRG 1559



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 79/208 (37%), Gaps = 67/208 (32%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------ 166
            G  GP G  G  G +G +G KGE+G+ G PG +GP G  G  G  G +G +G        
Sbjct: 1191 GAPGPEGTPGNPGQRGRLGKKGEKGQLGPPGEIGPAGGSGQHGKIGPKGARGTRGPLGHP 1250

Query: 167  ------------GYPGPQ---------------GIPGDE-------------------GK 180
                        GY G Q               G PG++                   G 
Sbjct: 1251 GGMGPGGELGIPGYGGHQGPAGPSGPPGPKGEKGYPGEDSTVLGPPGPIGEPGPTGERGD 1310

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            RG  GD GY G IGL               PG  G  G  G  G PG+ G  G  G  G 
Sbjct: 1311 RGEPGDEGYKGHIGL---------------PGLRGQIGQQGPPGEPGELGEQGVKGERGS 1355

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            KG TG +G  G++G  G+PG P     K
Sbjct: 1356 KGPTGKKGATGQAGKPGIPGKPGPAGQK 1383



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 79/180 (43%), Gaps = 48/180 (26%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY------PGPQGIPGDE------- 178
           ++G+ G +G  G  G PGP G+PG+ G+ G KGD G       PG QG PGD+       
Sbjct: 775 LRGDVGPEGLRGPSGIPGPMGLPGNMGQPGMKGDKGEHGLAGDPGDQGYPGDKGAPGSPG 834

Query: 179 -----GKRGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                GK GP+G                     D+G PG  G +G  GL G+ G  G  G
Sbjct: 835 PPGIRGKPGPQGKIGDPGSQGPLGPPGPEGFPGDIGVPGLNGPEGPKGLLGDRGSPGPQG 894

Query: 213 RNGMD---------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G++         G  G  G PG+ G  G  G  G KG  G +GN GK+G  G  G P 
Sbjct: 895 PKGVEGEVGPAGPIGAVGPRGKPGQKGYVGEPGPEGLKGEQGDQGNIGKTGEAGSAGLPG 954



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 179 GKRGPK---GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           GKRGP+   G  G PG  GL G  G  G+PG      + G  G PG  G  G  GI G  
Sbjct: 603 GKRGPRGMPGPHGNPGLPGLPGPKGPKGDPGFSPGKAKRGEKGDPGPIGFSGPPGIKGQK 662

Query: 236 GTNGEKGMTGPRGNRGKSGING 257
           G  G  G+ GPRG +G  G+ G
Sbjct: 663 GHKGFMGLQGPRGEQGVPGMAG 684


>gi|291391437|ref|XP_002712449.1| PREDICTED: macrophage receptor with collagenous structure
           [Oryctolagus cuniculus]
          Length = 498

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/138 (47%), Positives = 77/138 (55%), Gaps = 3/138 (2%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G  G  GAKG+ G  G  G  G PGV GP G +G PG  G  GPKG    PG  GIP
Sbjct: 265 GPQGLVGLPGAKGDQGHSGTPGVPGIPGVAGPSGAKGEPGSSGSMGPKGS---PGSPGIP 321

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G +G KGD G  G+ G  G  G+PG  G+ G  GR G  G  G  G  G+ G PG  
Sbjct: 322 GVAGPKGSKGDTGLQGQKGTKGEPGVPGPAGVKGDMGRPGPAGPKGNIGPAGQKGQPGEK 381

Query: 236 GTNGEKGMTGPRGNRGKS 253
           G++G++G  G RG RG+S
Sbjct: 382 GSSGQQGERGERGQRGES 399



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 88/187 (47%), Gaps = 27/187 (14%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------------VG 146
           P G +G  G  G +G KGE G KG+RG+ G PG                          G
Sbjct: 203 PQGEKGSQGGAGLMGPKGEPGAKGDRGDPGLPGSKGDVGMKGDIGAMGPPGPPGSKGDSG 262

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            PGPQG+ G  G +G +G  G PG  GIPG  G  G KG+ G  G +G  G  G PG PG
Sbjct: 263 KPGPQGLVGLPGAKGDQGHSGTPGVPGIPGVAGPSGAKGEPGSSGSMGPKGSPGSPGIPG 322

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---TGPRGNRGKSGINGVPGTPA 263
           + G  G  G  G+ G+ G  G+ G+PG  G  G+ G     GP+GN G +G  G PG   
Sbjct: 323 VAGPKGSKGDTGLQGQKGTKGEPGVPGPAGVKGDMGRPGPAGPKGNIGPAGQKGQPGEKG 382

Query: 264 ICAYKRE 270
               + E
Sbjct: 383 SSGQQGE 389



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 89/195 (45%), Gaps = 45/195 (23%)

Query: 112 PGLQGPIGQKGEIGA------------------KGEMGVKGERGEKGAPGVVGPPGPQGI 153
           PGL G  GQKG  GA                  KGE G  G +GEKG+ G  G  GP+G 
Sbjct: 162 PGLPGSPGQKGATGAAGNNGATGAPGPQGPPGIKGEKGTPGPQGEKGSQGGAGLMGPKGE 221

Query: 154 PGDEGKRG------PKGDMGYPGPQGI---------PGDEGKRGPKGDMGYPGRIGLDGR 198
           PG +G RG       KGD+G  G  G           GD GK GP+G +G PG  G  G 
Sbjct: 222 PGAKGDRGDPGLPGSKGDVGMKGDIGAMGPPGPPGSKGDSGKPGPQGLVGLPGAKGDQGH 281

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGK---------DGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G PG   + GIPG  G  G  G+          G PG  GIPG  G  G KG TG +G 
Sbjct: 282 SGTPG---VPGIPGVAGPSGAKGEPGSSGSMGPKGSPGSPGIPGVAGPKGSKGDTGLQGQ 338

Query: 250 RGKSGINGVPGTPAI 264
           +G  G  GVPG   +
Sbjct: 339 KGTKGEPGVPGPAGV 353



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 66/129 (51%), Gaps = 9/129 (6%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQG 152
           LV + G          PG+ G  G  G  GAKGE G  G  G KG+PG  G P   GP+G
Sbjct: 269 LVGLPGAKGDQGHSGTPGVPGIPGVAGPSGAKGEPGSSGSMGPKGSPGSPGIPGVAGPKG 328

Query: 153 IPGD---EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             GD   +G++G KG+ G PGP G+ GD G+ GP G     G IG  G+ G PGE G  G
Sbjct: 329 SKGDTGLQGQKGTKGEPGVPGPAGVKGDMGRPGPAGPK---GNIGPAGQKGQPGEKGSSG 385

Query: 210 IPGRNGMDG 218
             G  G  G
Sbjct: 386 QQGERGERG 394



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 50/108 (46%), Gaps = 33/108 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G KGE G+ G MG KG  G  G PGV GP G +G  G +G++G KG+ G PGP
Sbjct: 291 PGVAGPSGAKGEPGSSGSMGPKGSPGSPGIPGVAGPKGSKGDTGLQGQKGTKGEPGVPGP 350

Query: 172 QGIPGD---------------------------------EGKRGPKGD 186
            G+ GD                                  G+RG +G+
Sbjct: 351 AGVKGDMGRPGPAGPKGNIGPAGQKGQPGEKGSSGQQGERGERGQRGE 398



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 66/180 (36%), Gaps = 60/180 (33%)

Query: 149 GPQGIPGDEGKRGP---------------------------------KGDMGYPGPQGIP 175
           G +G PG +G +G                                  KG+ G PGPQG  
Sbjct: 148 GERGAPGQKGAQGAPGLPGSPGQKGATGAAGNNGATGAPGPQGPPGIKGEKGTPGPQGEK 207

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---------------------PGRN 214
           G +G  G  G  G PG  G  G  GLPG  G  G+                     PG  
Sbjct: 208 GSQGGAGLMGPKGEPGAKGDRGDPGLPGSKGDVGMKGDIGAMGPPGPPGSKGDSGKPGPQ 267

Query: 215 GMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+ G+PG        G PG  GIPG  G +G KG  G  G+ G  G  G PG P +   K
Sbjct: 268 GLVGLPGAKGDQGHSGTPGVPGIPGVAGPSGAKGEPGSSGSMGPKGSPGSPGIPGVAGPK 327



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 57/149 (38%), Gaps = 39/149 (26%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------------GLDGRDGLPGE 204
           +G+RG  G  G  G  G+PG  G++G  G  G  G              G  G  G  GE
Sbjct: 147 KGERGAPGQKGAQGAPGLPGSPGQKGATGAAGNNGATGAPGPQGPPGIKGEKGTPGPQGE 206

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK----------------------- 241
            G  G  G  G  G PG  G  G  G+PG+ G  G K                       
Sbjct: 207 KGSQGGAGLMGPKGEPGAKGDRGDPGLPGSKGDVGMKGDIGAMGPPGPPGSKGDSGKPGP 266

Query: 242 ----GMTGPRGNRGKSGINGVPGTPAICA 266
               G+ G +G++G SG  GVPG P +  
Sbjct: 267 QGLVGLPGAKGDQGHSGTPGVPGIPGVAG 295


>gi|354476788|ref|XP_003500605.1| PREDICTED: collagen alpha-1(VI) chain [Cricetulus griseus]
          Length = 1035

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 72/131 (54%), Gaps = 12/131 (9%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           +GERG+ G PG  G  G  G PGD    GP G  G  G +G  G++G RGPKG  G  G+
Sbjct: 276 EGERGKPGLPGEKGEAGDPGRPGD---LGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGK 332

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G+DG DG+ GE G  G+PG  G          PG DGI G  G  G+ G  GP+G +G+
Sbjct: 333 RGIDGVDGMKGETGFPGLPGCKGS---------PGFDGIQGPPGPKGDAGAFGPKGEKGE 383

Query: 253 SGINGVPGTPA 263
           +G +G  G P 
Sbjct: 384 AGADGEAGRPG 394



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 85/208 (40%), Gaps = 70/208 (33%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------------------- 150
           G+QGP G KG+ GA    G KGE+GE GA G  G PG                       
Sbjct: 361 GIQGPPGPKGDAGA---FGPKGEKGEAGADGEAGRPGSSGPPGDEGDPGEPGPPGEKGEA 417

Query: 151 -----------------------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
                                        +G  GD G+ GP+GD G  GP GIPGD G+ 
Sbjct: 418 GDEGNAGPDGPPGERGGPGERGPRGTPGVRGPRGDPGESGPQGDQGREGPIGIPGDPGEA 477

Query: 182 GPKGDMGYPGRIGLDGRDGLP---------------GEPGLDGIPGRNGMDGIPGKDGLP 226
           GP G  GY G  G  G +GL                GE G DG PG NG +G PG  G P
Sbjct: 478 GPIGPKGYRGDEGPPGPEGLRGAPGPAGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYP 536

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G PG NGT G  G+ G  G  G  G
Sbjct: 537 GNRGPPGINGTKGYPGLKGDEGEVGDPG 564



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 84/193 (43%), Gaps = 30/193 (15%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      E   PG  G +G  G  G KGE G +GE+G +G  G  G  G +GI G +G +
Sbjct: 283 GLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMK 342

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------ 214
           G  G  G PG +G PG +G +GP G  G  G  G  G  G  G  G  G PG +      
Sbjct: 343 GETGFPGLPGCKGSPGFDGIQGPPGPKGDAGAFGPKGEKGEAGADGEAGRPGSSGPPGDE 402

Query: 215 ---------GMDGIPGKDG---------------LPGKDGIPGTNGTNGEKGMTGPRGNR 250
                    G  G  G +G                 G  G PG  G  G+ G +GP+G++
Sbjct: 403 GDPGEPGPPGEKGEAGDEGNAGPDGPPGERGGPGERGPRGTPGVRGPRGDPGESGPQGDQ 462

Query: 251 GKSGINGVPGTPA 263
           G+ G  G+PG P 
Sbjct: 463 GREGPIGIPGDPG 475



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 72/142 (50%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GPIG  G+ G  G +G KG RG++      GPPGP+G+      RG  G  G PG  
Sbjct: 463 GREGPIGIPGDPGEAGPIGPKGYRGDE------GPPGPEGL------RGAPGPAGPPGDP 510

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+ G+ G+ GP G+       G +G  G PG PG  G PG NG  G PG  G  G+ G P
Sbjct: 511 GLMGERGEDGPPGN-------GTEGFPGFPGYPGNRGPPGINGTKGYPGLKGDEGEVGDP 563

Query: 233 GTNGTNGEKGMTGPRGNRGKSG 254
           G +  +       PRG +G  G
Sbjct: 564 GEDNND-----ISPRGAKGAKG 580



 Score = 42.7 bits (99), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 46/109 (42%), Gaps = 32/109 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMG------------------VKGERGEKGAPGVVGPPGPQGI 153
           PG  GPIG KG  G +G  G                  + GERGE G PG  G  G  G 
Sbjct: 474 PGEAGPIGPKGYRGDEGPPGPEGLRGAPGPAGPPGDPGLMGERGEDGPPGN-GTEGFPGF 532

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGK-------------RGPKGDMGY 189
           PG  G RGP G  G  G  G+ GDEG+             RG KG  GY
Sbjct: 533 PGYPGNRGPPGINGTKGYPGLKGDEGEVGDPGEDNNDISPRGAKGAKGY 581


>gi|291393225|ref|XP_002712996.1| PREDICTED: procollagen, type IV, alpha 1-like [Oryctolagus
           cuniculus]
          Length = 1308

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/156 (44%), Positives = 89/156 (57%), Gaps = 22/156 (14%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGPKGDMGYPGPQGIPG- 176
           KG+ G +GE+G KG PG+ G PG  G+PG +G           G KG  G PGPQG+PG 
Sbjct: 650 KGQKGDQGEKGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGVPGL 709

Query: 177 --DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------RNGMDGIPGKDGLPGK 228
             ++G +G KG  G PG IG+ GR G  G+PG+ G PG        G  GIPG  G PG 
Sbjct: 710 PGEKGAKGEKGQAGLPG-IGIPGRPGDKGDPGVAGFPGSPGEKGEKGSTGIPGMPGSPGP 768

Query: 229 DGIPGTN---GTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG+    G  G+ G TGP G +G+ G +G+PG+
Sbjct: 769 KGSPGSAGYPGLPGQPGPTGPAGQKGEPGRDGIPGS 804



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 98/192 (51%), Gaps = 20/192 (10%)

Query: 89  NAYSRIPLVAMQGFCNSTKEYCP---PGLQGPIGQKGEIGAKGE---MGVKGERGEKGAP 142
            +  ++ + +M+G      E  P   PG+ G  G  G  G KG    MG+ G  GEKG P
Sbjct: 639 GSMDKVDMGSMKGQKGDQGEKGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVP 698

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPG--------PQ------GIPGDEGKRGPKGDMG 188
           G+ GP G  G+PG++G +G KG  G PG         +      G PG  G++G KG  G
Sbjct: 699 GIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDPGVAGFPGSPGEKGEKGSTG 758

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG  G  G  G PG  G  G+PG+ G  G  G+ G PG+DGIPG+ G  GE G  G  G
Sbjct: 759 IPGMPGSPGPKGSPGSAGYPGLPGQPGPTGPAGQKGEPGRDGIPGSAGEKGEPGSKGDVG 818

Query: 249 NRGKSGINGVPG 260
             G +G  G+PG
Sbjct: 819 FPGLAGSPGIPG 830



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 89/176 (50%), Gaps = 25/176 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------- 155
           PG  GP G  G  G KG+ G  G  G +G PG  G  G  G+PG                
Sbjct: 593 PGSPGPAGAPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQ 652

Query: 156 --DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             D+G++GPKGD G  G  G PG  G +G  G MG PG  G  G  G+PG  G+ G+PG 
Sbjct: 653 KGDQGEKGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGVPGLPGE 712

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT------GPRGNRGKSGINGVPGTPA 263
            G  G  G+ GLPG  GIPG  G  G+ G+       G +G +G +GI G+PG+P 
Sbjct: 713 KGAKGEKGQAGLPGI-GIPGRPGDKGDPGVAGFPGSPGEKGEKGSTGIPGMPGSPG 767



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 92/187 (49%), Gaps = 38/187 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------GPQGIPGDEGKR----- 160
           PG QG  G  G  G KGEMGV G  G+ G+PG  G P      G  G PG  G R     
Sbjct: 566 PGQQGTPGIPGFPGPKGEMGVMGTPGQPGSPGPAGAPGLPGEKGDHGFPGSSGPRGDPGF 625

Query: 161 -GPKGDMGYPGP------------QGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGE 204
            G KGD+G PG             +G  GD+G++GPKGD    G PG  GL G  G  G 
Sbjct: 626 KGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGPKGDPGISGTPGAPGLPGPKGSVGG 685

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT--------GPRGNRGKSGIN 256
            GL G PG  G+ GIPG  G+P   G+PG  G  GEKG          G  G++G  G+ 
Sbjct: 686 MGLPGTPGEKGVPGIPGPQGVP---GLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDPGVA 742

Query: 257 GVPGTPA 263
           G PG+P 
Sbjct: 743 GFPGSPG 749



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 89/195 (45%), Gaps = 34/195 (17%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--------VGPP 148
           V   G   +  E   PG+ GP   +G  G  GE G KGE+G+ G PG+         G P
Sbjct: 683 VGGMGLPGTPGEKGVPGIPGP---QGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDP 739

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  G PG  G++G KG  G PG  G PG +G  G  G  G PG+ G  G  G  GEPG D
Sbjct: 740 GVAGFPGSPGEKGEKGSTGIPGMPGSPGPKGSPGSAGYPGLPGQPGPTGPAGQKGEPGRD 799

Query: 209 GIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMT--------------------G 245
           GIPG  G  G PG     G PG  G PG  G  GE G                      G
Sbjct: 800 GIPGSAGEKGEPGSKGDVGFPGLAGSPGIPGPKGEPGFAGPPGPQGQPGLPGAPGRPVEG 859

Query: 246 PRGNRGKSGINGVPG 260
           P+G+RG  G  G+PG
Sbjct: 860 PKGDRGPQGQPGLPG 874



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 81/173 (46%), Gaps = 30/173 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  GQ+G  G  G  G KGE G  G PG  G PGP G PG  G+   KGD G+PG  
Sbjct: 561 GLPGLPGQQGTPGIPGFPGPKGEMGVMGTPGQPGSPGPAGAPGLPGE---KGDHGFPGSS 617

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------------GLDGIPGRNGMDGIP 220
           G  GD G +G KGD+G            LPG+P            G  G  G  G  G P
Sbjct: 618 GPRGDPGFKGDKGDVG------------LPGKPGSMDKVDMGSMKGQKGDQGEKGPKGDP 665

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI---NGVPGTPAICAYKRE 270
           G  G PG  G+PG  G+ G  G+ G  G +G  GI    GVPG P     K E
Sbjct: 666 GISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGVPGLPGEKGAKGE 718



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 78/154 (50%), Gaps = 17/154 (11%)

Query: 132 VKGERGEKGAPGV--VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM-- 187
           VKGE+G  G PG+   GP G +G  G  G  G  G  G PG QG PG  G  GPKG+M  
Sbjct: 527 VKGEKGFPGFPGLDMPGPKGDKGAQGLPGLTGQSGLPGLPGQQGTPGIPGFPGPKGEMGV 586

Query: 188 ----GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT------ 237
               G PG  G  G  GLPGE G  G PG +G  G PG  G  G  G+PG  G+      
Sbjct: 587 MGTPGQPGSPGPAGAPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDM 646

Query: 238 ---NGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
               G+KG  G +G +G  GI+G PG P +   K
Sbjct: 647 GSMKGQKGDQGEKGPKGDPGISGTPGAPGLPGPK 680



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 90/204 (44%), Gaps = 51/204 (25%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G+KGE G+ G  G+ G  G KG+PG  G PG   +PG  G  GP G  G PG  
Sbjct: 743 GFPGSPGEKGEKGSTGIPGMPGSPGPKGSPGSAGYPG---LPGQPGPTGPAGQKGEPGRD 799

Query: 173 GIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGL------------DGIPGR---- 213
           GIPG  G++G    KGD+G+PG  G  G  G  GEPG              G PGR    
Sbjct: 800 GIPGSAGEKGEPGSKGDVGFPGLAGSPGIPGPKGEPGFAGPPGPQGQPGLPGAPGRPVEG 859

Query: 214 -NGMDGIPGKDGLPGK-------------------------DGIPGTNGT---NGEKGMT 244
             G  G  G+ GLPG+                         DG+ G  G     G  G  
Sbjct: 860 PKGDRGPQGQPGLPGEREAGSGSEGEAGLPGPMGPPGLPGLDGLKGDKGNPGWPGAPGAP 919

Query: 245 GPRGNRGKSGINGVPGTPAICAYK 268
           GP+G+ G  G+ G+ G+P I   K
Sbjct: 920 GPKGDPGFQGMPGIGGSPGITGSK 943



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 90/206 (43%), Gaps = 57/206 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
           PG+ G  G KG  G+ G  G+ G+ G  G  G  G PG  GIPG  G++   G KGD+G+
Sbjct: 760 PGMPGSPGPKGSPGSAGYPGLPGQPGPTGPAGQKGEPGRDGIPGSAGEKGEPGSKGDVGF 819

Query: 169 P---GPQGIPGDEGK-----------------------RGPKGDMGYPGRIGLDGR---- 198
           P   G  GIPG +G+                        GPKGD G  G+ GL G     
Sbjct: 820 PGLAGSPGIPGPKGEPGFAGPPGPQGQPGLPGAPGRPVEGPKGDRGPQGQPGLPGEREAG 879

Query: 199 ---------------------DGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
                                DGL G+   PG  G PG  G  G PG  G+PG  G PG 
Sbjct: 880 SGSEGEAGLPGPMGPPGLPGLDGLKGDKGNPGWPGAPGAPGPKGDPGFQGMPGIGGSPGI 939

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G+ G  G  G +G+ G+ G+ G
Sbjct: 940 TGSKGDMGPPGVPGFQGQKGLPGLQG 965



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 84/179 (46%), Gaps = 39/179 (21%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGE-------RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           LQGP G  G +G  G  G  GE       +G+KG PG  G PG   +PG  G  G  G  
Sbjct: 297 LQGPQGVPGLMGQPGAKGEPGEIYFDARLKGDKGDPGFPGQPG---MPGRAGSPGRDGHP 353

Query: 167 GYPGPQGIPGDEGKRG------------PKGDMGYPGRIGL--------DGRDGLPGEPG 206
           G PGP+G PG  G +G             +GD+G PG  G          G+ G PG PG
Sbjct: 354 GLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDIGPPGPPGFGPIGPAGDKGQAGFPGSPG 413

Query: 207 LDGIPGRNGMDG--IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+PG  G  G  +P   G PG +G+PG+       G  GP+G+RG  G  G PG P 
Sbjct: 414 SPGLPGPKGEAGRVVP-LPGPPGAEGLPGS------PGFQGPQGDRGFPGTPGRPGLPG 465



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 76/191 (39%), Gaps = 69/191 (36%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGK--------- 159
           PG  GP GQKGE G  G  G  GE+GE G+ G VG PG     GIPG +G+         
Sbjct: 784 PGPTGPAGQKGEPGRDGIPGSAGEKGEPGSKGDVGFPGLAGSPGIPGPKGEPGFAGPPGP 843

Query: 160 --------------RGPKGDMGYPGPQGIPGDEGKR------------------------ 181
                          GPKGD G   PQG PG  G+R                        
Sbjct: 844 QGQPGLPGAPGRPVEGPKGDRG---PQGQPGLPGEREAGSGSEGEAGLPGPMGPPGLPGL 900

Query: 182 -GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------PGKDGL 225
            G KGD G PG  G  G  G  G+PG  G+PG  G  GI                G+ GL
Sbjct: 901 DGLKGDKGNPGWPGAPGAPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGQKGL 960

Query: 226 PGKDGIPGTNG 236
           PG  GI G  G
Sbjct: 961 PGLQGIKGDQG 971



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 65/134 (48%), Gaps = 30/134 (22%)

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGR----DGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           GPQG+PG  G+ G KG+   PG I  D R     G PG PG  G+PGR G  G  G  GL
Sbjct: 299 GPQGVPGLMGQPGAKGE---PGEIYFDARLKGDKGDPGFPGQPGMPGRAGSPGRDGHPGL 355

Query: 226 PGKDGIPGTNGTNGEKGMTGP------RG-----------------NRGKSGINGVPGTP 262
           PG  G PG+ G  GE+G  G       RG                 ++G++G  G PG+P
Sbjct: 356 PGPKGSPGSVGLKGERGPPGGVGFPGSRGDIGPPGPPGFGPIGPAGDKGQAGFPGSPGSP 415

Query: 263 AICAYKRESCSLLP 276
            +   K E+  ++P
Sbjct: 416 GLPGPKGEAGRVVP 429



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 77/179 (43%), Gaps = 35/179 (19%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK------------GAPGVVGPP 148
           G   S  E   PG +G +G  G  G+ G  G KGE G              GAPG     
Sbjct: 800 GIPGSAGEKGEPGSKGDVGFPGLAGSPGIPGPKGEPGFAGPPGPQGQPGLPGAPGRP--- 856

Query: 149 GPQGIPGDEGKRGPKGDMGYPGP-QGIPGDEGKR---------------GPKGDMGYPGR 192
               + G +G RGP+G  G PG  +   G EG+                G KGD G PG 
Sbjct: 857 ----VEGPKGDRGPQGQPGLPGEREAGSGSEGEAGLPGPMGPPGLPGLDGLKGDKGNPGW 912

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            G  G  G  G+PG  G+PG  G  GI G  G  G  G+PG  G  G  G+ G +G++G
Sbjct: 913 PGAPGAPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGQKGLPGLQGIKGDQG 971



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 63/133 (47%), Gaps = 27/133 (20%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------MGVKGERG-------------- 137
            M G   S      PGL GP G  G +G KGE      +G  G RG              
Sbjct: 339 GMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDIGPPGPPGFGPIG 398

Query: 138 ---EKGAPGVVGPPGPQGIPGDEGKRGPKGDM-GYPGPQGIPGDEGKRGPKGDMGYPGRI 193
              +KG  G  G PG  G+PG +G+ G    + G PG +G+PG  G +GP+GD G+P   
Sbjct: 399 PAGDKGQAGFPGSPGSPGLPGPKGEAGRVVPLPGPPGAEGLPGSPGFQGPQGDRGFP--- 455

Query: 194 GLDGRDGLPGEPG 206
           G  GR GLPGE G
Sbjct: 456 GTPGRPGLPGEKG 468


>gi|348517851|ref|XP_003446446.1| PREDICTED: collagen alpha-1(I) chain-like isoform 1 [Oreochromis
           niloticus]
 gi|359804080|dbj|BAL40987.1| collagen type I alpha 1 [Oreochromis niloticus]
          Length = 1447

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 86/168 (51%), Gaps = 12/168 (7%)

Query: 112 PGLQGPIGQ---------KGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGK 159
           PG QG +G+          GE GA G  G +G+RG   E+GAPG +GP G +G PG  G 
Sbjct: 630 PGPQGAVGETGKPGEQGVPGEAGAPGPAGARGDRGFPGERGAPGAIGPAGARGSPGASGN 689

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G KGD G PG  G  G  G +G  G+ G  G  GL G  G  G  G DG PG++G  G+
Sbjct: 690 DGAKGDAGAPGTPGAQGPPGLQGMPGERGAAGLPGLRGNRGDQGPKGADGTPGKDGPRGL 749

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G  GLPG  G PG  G  G +G  GP G RG  G  G  G P    +
Sbjct: 750 TGPIGLPGPAGSPGDKGEPGAQGPVGPSGARGPPGERGEAGPPGPAGF 797



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 89/198 (44%), Gaps = 39/198 (19%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK-------- 159
           E   PG  GP G +G  GA G  G KG+ G  G PG  GPPG QG+PG+ G         
Sbjct: 668 ERGAPGAIGPAGARGSPGASGNDGAKGDAGAPGTPGAQGPPGLQGMPGERGAAGLPGLRG 727

Query: 160 ----RGPKGDMGYP---------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
               +GPKG  G P         GP G+PG  G  G KG+ G  G +G  G  G PGE G
Sbjct: 728 NRGDQGPKGADGTPGKDGPRGLTGPIGLPGPAGSPGDKGEPGAQGPVGPSGARGPPGERG 787

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------------------GMTGPRG 248
             G PG  G  G PG DG PG  G PG NG  G+                   G TGP+G
Sbjct: 788 EAGPPGPAGFAGPPGADGQPGAKGEPGDNGAKGDSGPPGPAGPTGAPGPQGPVGNTGPKG 847

Query: 249 NRGKSGINGVPGTPAICA 266
            RG +G  G  G P    
Sbjct: 848 ARGPAGPPGATGFPGAAG 865



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 89/183 (48%), Gaps = 21/183 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VKGERGEKG 140
           ++   G   +  E   PG +G +G  G  GA G+ G                +GE+G  G
Sbjct: 563 VMGFPGPKGAAGEAGKPGERGTMGPTGPAGAPGKDGDVGAQGPPGPAGPAGERGEQGPAG 622

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK---GDMGYPGRIGLDG 197
           +PG  G PGPQG  G+ GK    G+ G PG  G PG  G RG +   G+ G PG IG  G
Sbjct: 623 SPGFQGLPGPQGAVGETGK---PGEQGVPGEAGAPGPAGARGDRGFPGERGAPGAIGPAG 679

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G PG  G DG  G  G  G PG  G PG  G+PG  G  G  G+ G RG++G  G +G
Sbjct: 680 ARGSPGASGNDGAKGDAGAPGTPGAQGPPGLQGMPGERGAAGLPGLRGNRGDQGPKGADG 739

Query: 258 VPG 260
            PG
Sbjct: 740 TPG 742



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 90/215 (41%), Gaps = 54/215 (25%)

Query: 104 NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------- 147
            +T E   PGL GP G  GE G  GE G+ G +G  G+PG  GP                
Sbjct: 490 GATGERGAPGLVGPKGATGEPGRTGEPGLPGAKGMTGSPGNPGPDGKIGPSGAPGQDGRP 549

Query: 148 -----------------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG----------- 179
                            PGP+G  G+ GK G +G MG  GP G PG +G           
Sbjct: 550 GPPGPGGARGQPGVMGFPGPKGAAGEAGKPGERGTMGPTGPAGAPGKDGDVGAQGPPGPA 609

Query: 180 ----KRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGK---DGLPGKD 229
               +RG +G  G PG  GL G  G  GE   PG  G+PG  G  G  G     G PG+ 
Sbjct: 610 GPAGERGEQGPAGSPGFQGLPGPQGAVGETGKPGEQGVPGEAGAPGPAGARGDRGFPGER 669

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG  G  G +G  G  GN G  G  G PGTP  
Sbjct: 670 GAPGAIGPAGARGSPGASGNDGAKGDAGAPGTPGA 704



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 88/210 (41%), Gaps = 45/210 (21%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +GF  S     P G  G  G  G +G KG  G  G  GE G PG  G  G  G PG +GK
Sbjct: 477 RGFPGSDGPAGPKGATGERGAPGLVGPKGATGEPGRTGEPGLPGAKGMTGSPGNPGPDGK 536

Query: 160 RGPKGD---------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            GP G                      MG+PGP+G  G+ GK G +G MG  G  G  G+
Sbjct: 537 IGPSGAPGQDGRPGPPGPGGARGQPGVMGFPGPKGAAGEAGKPGERGTMGPTGPAGAPGK 596

Query: 199 DG---------------------LPGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGT 234
           DG                       G PG  G+PG  G     G PG+ G+PG+ G PG 
Sbjct: 597 DGDVGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPQGAVGETGKPGEQGVPGEAGAPGP 656

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G++G  G RG  G  G  G  G+P  
Sbjct: 657 AGARGDRGFPGERGAPGAIGPAGARGSPGA 686



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 80/207 (38%), Gaps = 60/207 (28%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           +G  G +G  G+ G  G KG  GE+GAPG+VGP G  G PG  G+ G  G  G  G  G 
Sbjct: 471 RGAPGGRGFPGSDGPAGPKGATGERGAPGLVGPKGATGEPGRTGEPGLPGAKGMTGSPGN 530

Query: 175 PGDEGKRGPKGD---------------------MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG +GK GP G                      MG+PG  G  G  G PGE    G  G 
Sbjct: 531 PGPDGKIGPSGAPGQDGRPGPPGPGGARGQPGVMGFPGPKGAAGEAGKPGE---RGTMGP 587

Query: 214 NGMDGIPGKD------------------------------GLPGKDGI------PGTNGT 237
            G  G PGKD                              GLPG  G       PG  G 
Sbjct: 588 TGPAGAPGKDGDVGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPQGAVGETGKPGEQGV 647

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAI 264
            GE G  GP G RG  G  G  G P  
Sbjct: 648 PGEAGAPGPAGARGDRGFPGERGAPGA 674



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 83/194 (42%), Gaps = 54/194 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGA------------PGV 144
           PG +G  G+ G  G+KGE G KG               E G++GA            PG 
Sbjct: 411 PGPKGNTGEAGAPGSKGEAGAKGEAGAPGVQGPPGPPGEEGKRGARGEPGAAGARGGPGE 470

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            G PG +G PG +G  GPKG  G  G  G+       GPKG  G PGR    G  GLPG 
Sbjct: 471 RGAPGGRGFPGSDGPAGPKGATGERGAPGL------VGPKGATGEPGRT---GEPGLPGA 521

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKD------------------GIPGTNGTNGEKGMTGP 246
            G+ G PG  G DG  G  G PG+D                  G PG  G  GE G  G 
Sbjct: 522 KGMTGSPGNPGPDGKIGPSGAPGQDGRPGPPGPGGARGQPGVMGFPGPKGAAGEAGKPGE 581

Query: 247 RGNRGKSGINGVPG 260
           RG  G +G  G PG
Sbjct: 582 RGTMGPTGPAGAPG 595



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 84/230 (36%), Gaps = 87/230 (37%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGE------------------------KGAPGVVG 146
            P G  GP G  G+ GAKGE G  G +G+                        KGA G  G
Sbjct: 794  PAGFAGPPGADGQPGAKGEPGDNGAKGDSGPPGPAGPTGAPGPQGPVGNTGPKGARGPAG 853

Query: 147  PPGPQGIPGDEGK---------------------------RGPKGDMGYPG--------- 170
            PPG  G PG  G+                           RG  G  G PG         
Sbjct: 854  PPGATGFPGAAGRVGPPGPAGNAGPPGPPGPAGKEGPKGNRGETGPAGRPGELGAAGPPG 913

Query: 171  ---------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---PGRNGMDG 218
                       G PG  G  GP+G  G  G +GL G+ G  G PGL G    PG+ G  G
Sbjct: 914  PPGEKGSPGADGAPGSAGIPGPQGIAGQRGIVGLPGQRGERGFPGLAGPVGEPGKQGPSG 973

Query: 219  ---------------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                           + G  G PG++G PG  G  G  G  GP+G+RG+S
Sbjct: 974  PSGERGPPGPMGPPGLAGAPGEPGREGTPGNEGAAGRDGAPGPKGDRGES 1023



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 84/233 (36%), Gaps = 87/233 (37%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G  G IG  G  G  G++GE GA G VGP G +G PG+ G+ GP G  G+ GP
Sbjct: 741 PGKDGPRGLTGPIGLPGPAGSPGDKGEPGAQGPVGPSGARGPPGERGEAGPPGPAGFAGP 800

Query: 172 ---------QGIPGD------------------------------EGKRGPKGDMGYPGR 192
                    +G PGD                              +G RGP G  G  G 
Sbjct: 801 PGADGQPGAKGEPGDNGAKGDSGPPGPAGPTGAPGPQGPVGNTGPKGARGPAGPPGATGF 860

Query: 193 IGLDGR------------------------DGLPGEPGLDGIPGRNGM------------ 216
            G  GR                         G  GE G  G PG  G             
Sbjct: 861 PGAAGRVGPPGPAGNAGPPGPPGPAGKEGPKGNRGETGPAGRPGELGAAGPPGPPGEKGS 920

Query: 217 ---DGIPGKDGLPGKDGI---------PGTNGTNGEKGMTGPRGNRGKSGING 257
              DG PG  G+PG  GI         PG  G  G  G+ GP G  GK G +G
Sbjct: 921 PGADGAPGSAGIPGPQGIAGQRGIVGLPGQRGERGFPGLAGPVGEPGKQGPSG 973



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 85/212 (40%), Gaps = 51/212 (24%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           + + G   S  +   PG QGP+G  G   A+G  G +GE G  G  G  GPPG  G PG 
Sbjct: 753 IGLPGPAGSPGDKGEPGAQGPVGPSG---ARGPPGERGEAGPPGPAGFAGPPGADGQPGA 809

Query: 157 EGKRGPKGDMG---------------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--- 198
           +G+ G  G  G                 GP G  G +G RGP G  G  G  G  GR   
Sbjct: 810 KGEPGDNGAKGDSGPPGPAGPTGAPGPQGPVGNTGPKGARGPAGPPGATGFPGAAGRVGP 869

Query: 199 ---------------------DGLPGEPGLDGIPGRNGM---------DGIPGKDGLPGK 228
                                 G  GE G  G PG  G           G PG DG PG 
Sbjct: 870 PGPAGNAGPPGPPGPAGKEGPKGNRGETGPAGRPGELGAAGPPGPPGEKGSPGADGAPGS 929

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GIPG  G  G++G+ G  G RG+ G  G+ G
Sbjct: 930 AGIPGPQGIAGQRGIVGLPGQRGERGFPGLAG 961



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 74/201 (36%), Gaps = 66/201 (32%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------- 157
           P G +GP G++GE G  G  G  G  G  G PG  G PG  G  GD              
Sbjct: 776 PSGARGPPGERGEAGPPGPAGFAGPPGADGQPGAKGEPGDNGAKGDSGPPGPAGPTGAPG 835

Query: 158 --------GKRGPKGDMGYPGPQGIPGDEGK---------------------------RG 182
                   G +G +G  G PG  G PG  G+                           RG
Sbjct: 836 PQGPVGNTGPKGARGPAGPPGATGFPGAAGRVGPPGPAGNAGPPGPPGPAGKEGPKGNRG 895

Query: 183 PKGDMGYPGRIG---------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G  G PG +G                DG  G  G PG  GI G+ G+ G+PG+    G
Sbjct: 896 ETGPAGRPGELGAAGPPGPPGEKGSPGADGAPGSAGIPGPQGIAGQRGIVGLPGQR---G 952

Query: 228 KDGIPGTNGTNGEKGMTGPRG 248
           + G PG  G  GE G  GP G
Sbjct: 953 ERGFPGLAGPVGEPGKQGPSG 973



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  GE G+ G PG  GPPGPQG              G+PG  G+PG +G RG  G  G  
Sbjct: 214 GEDGESGKPGRPGERGPPGPQGA------------RGFPGTPGLPGIKGHRGFSGLDGAK 261

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           G  G  G  G  G PG +G PG  G  G+PG+
Sbjct: 262 GDTGPAGPKGEAGTPGENGTPGAMGPRGLPGE 293



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 61/150 (40%), Gaps = 39/150 (26%)

Query: 142 PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG------------------DEGKRGP 183
           PG  GP GPQG  G  G +G  G+ G PG +G  G                  +EGKRG 
Sbjct: 396 PGPRGPSGPQGAAGAPGPKGNTGEAGAPGSKGEAGAKGEAGAPGVQGPPGPPGEEGKRGA 455

Query: 184 K------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +                  G  G+PG  G  G  G  GE G  G+ G  G  G PG+ G 
Sbjct: 456 RGEPGAAGARGGPGERGAPGGRGFPGSDGPAGPKGATGERGAPGLVGPKGATGEPGRTGE 515

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           P   G+PG  G  G  G  GP G  G SG 
Sbjct: 516 P---GLPGAKGMTGSPGNPGPDGKIGPSGA 542



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 60/127 (47%), Gaps = 15/127 (11%)

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL------------DGRDG 200
            PG  G  GP+G  G PGP+G  G+ G  G KG+ G  G  G             +G+ G
Sbjct: 395 FPGPRGPSGPQGAAGAPGPKGNTGEAGAPGSKGEAGAKGEAGAPGVQGPPGPPGEEGKRG 454

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGING 257
             GEPG  G  G  G  G PG  G PG DG  G  G  GE+   G+ GP+G  G+ G  G
Sbjct: 455 ARGEPGAAGARGGPGERGAPGGRGFPGSDGPAGPKGATGERGAPGLVGPKGATGEPGRTG 514

Query: 258 VPGTPAI 264
            PG P  
Sbjct: 515 EPGLPGA 521


>gi|312371915|gb|EFR19982.1| hypothetical protein AND_20858 [Anopheles darlingi]
          Length = 748

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 97/210 (46%), Gaps = 29/210 (13%)

Query: 71  EREKEQQNSTHNNPWVWLNAYSRIPL--VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG 128
           E+ +     T   P        R P+    +QGF         PG QGP+G  G  G +G
Sbjct: 64  EKGEPGNAGTPGEPGAAGAVGDRGPVGPQGLQGF---------PGPQGPVGAPGSKGDRG 114

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            MG+KGE+G  G PGV G  GPQG+    G +G RG  G  G  GP G PG  G +GP G
Sbjct: 115 SMGLKGEQGNSGLPGVPGEAGPQGLIGLTGSKGARGEPGLRGESGPMGTPGRPGDQGPIG 174

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---------- 235
             G PG  G  G  G+ G PG  G PG  G  G+PG  G+ G  G  G++          
Sbjct: 175 QTGNPGSPGTPGTPGIKGNPGDTGRPGNAGPQGLPGPQGIEGLKGEAGSDGPPGPPGNQG 234

Query: 236 -----GTNGEKGMTGPRGNRGKSGINGVPG 260
                G  G  G+ GP+G +G  G+ G  G
Sbjct: 235 PHGVPGDRGLPGLPGPQGAQGSRGMRGAAG 264



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 83/161 (51%), Gaps = 3/161 (1%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G  GE GA G +G +G  G +G  G  GP GP G PG +G RG  G  G  G  
Sbjct: 66  GEPGNAGTPGEPGAAGAVGDRGPVGPQGLQGFPGPQGPVGAPGSKGDRGSMGLKGEQGNS 125

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG  G+ GP+G +G  G  G  G  GL GE G  G PGR G  G  G+ G PG  G P
Sbjct: 126 GLPGVPGEAGPQGLIGLTGSKGARGEPGLRGESGPMGTPGRPGDQGPIGQTGNPGSPGTP 185

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           GT G  G  G TG  GN   +G  G+PG   I   K E+ S
Sbjct: 186 GTPGIKGNPGDTGRPGN---AGPQGLPGPQGIEGLKGEAGS 223



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 89/188 (47%), Gaps = 15/188 (7%)

Query: 89  NAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK------------GER 136
            A   + +  ++G      E    G  GP G +G  G  GE G++             E+
Sbjct: 6   GAPGMVGMPGLRGPAGPAGEKGERGSSGPTGPEGPAGRIGERGLQGPMGPPGPPGEPAEK 65

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GE G  G  G PG  G  GD G  GP+G  G+PGPQG  G  G +G +G MG  G  G  
Sbjct: 66  GEPGNAGTPGEPGAAGAVGDRGPVGPQGLQGFPGPQGPVGAPGSKGDRGSMGLKGEQGNS 125

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G+PGE G  G+ G  G  G  G+ GL G+ G  GT G  G++   GP G  G  G  
Sbjct: 126 GLPGVPGEAGPQGLIGLTGSKGARGEPGLRGESGPMGTPGRPGDQ---GPIGQTGNPGSP 182

Query: 257 GVPGTPAI 264
           G PGTP I
Sbjct: 183 GTPGTPGI 190



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 84/189 (44%), Gaps = 36/189 (19%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G   S      PGL+G  G  G  G  G+ G  G+ G  G+PG  G PG +G PGD G+ 
Sbjct: 141 GLTGSKGARGEPGLRGESGPMGTPGRPGDQGPIGQTGNPGSPGTPGTPGIKGNPGDTGRP 200

Query: 161 GPKGDMGYPGPQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G  G PGPQGI G +G+ G   P G  G  G  G+ G  GLPG PG  G  G  GM 
Sbjct: 201 GNAGPQGLPGPQGIEGLKGEAGSDGPPGPPGNQGPHGVPGDRGLPGLPGPQGAQGSRGMR 260

Query: 218 GIPGK---------------------------------DGLPGKDGIPGTNGTNGEKGMT 244
           G  G+                                 +GLPGK G PG  G  G+KG  
Sbjct: 261 GAAGEAGHPGKPGNDGPPGPPGQLGPAGPPGPTGDTGPEGLPGKQGPPGLAGRAGDKGPV 320

Query: 245 GPRGNRGKS 253
           G +G +G S
Sbjct: 321 GAQGPQGTS 329



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 69/137 (50%), Gaps = 18/137 (13%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------------P 183
           +G +GAPG+VG PG +G  G  G++G +G  G  GP+G  G  G+RG             
Sbjct: 2   KGHQGAPGMVGMPGLRGPAGPAGEKGERGSSGPTGPEGPAGRIGERGLQGPMGPPGPPGE 61

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             + G PG        G PGEPG  G  G  G  G  G  G PG  G  G  G+ G++G 
Sbjct: 62  PAEKGEPGNA------GTPGEPGAAGAVGDRGPVGPQGLQGFPGPQGPVGAPGSKGDRGS 115

Query: 244 TGPRGNRGKSGINGVPG 260
            G +G +G SG+ GVPG
Sbjct: 116 MGLKGEQGNSGLPGVPG 132



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 94/227 (41%), Gaps = 78/227 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGP---PGPQGIPGDEGKRGP--- 162
           PG QGPIGQ G  G+ G  G   +KG  G+ G PG  GP   PGPQGI G +G+ G    
Sbjct: 167 PGDQGPIGQTGNPGSPGTPGTPGIKGNPGDTGRPGNAGPQGLPGPQGIEGLKGEAGSDGP 226

Query: 163 ---------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD----------- 196
                          +G  G PGPQG  G  G RG  G+ G+PG+ G D           
Sbjct: 227 PGPPGNQGPHGVPGDRGLPGLPGPQGAQGSRGMRGAAGEAGHPGKPGNDGPPGPPGQLGP 286

Query: 197 ----------GRDGLPGEPGLDGIPGR--------------------------------- 213
                     G +GLPG+ G  G+ GR                                 
Sbjct: 287 AGPPGPTGDTGPEGLPGKQGPPGLAGRAGDKGPVGAQGPQGTSGAPGLPGPPGPQGPAGL 346

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G+ G  G DG PG  G  G  G+ GP+G+ G+ G+ GV G
Sbjct: 347 TGERGLRGETGPQGTDGPPGPRGKAGPPGIEGPKGDNGEPGMKGVKG 393



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 51/91 (56%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPGL G  G KG +GA+G  G  G  G  G PG  GP G  G  G  G+ GP+G  G PG
Sbjct: 307 PPGLAGRAGDKGPVGAQGPQGTSGAPGLPGPPGPQGPAGLTGERGLRGETGPQGTDGPPG 366

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
           P+G  G  G  GPKGD G PG  G+ G  GL
Sbjct: 367 PRGKAGPPGIEGPKGDNGEPGMKGVKGHRGL 397


>gi|390333872|ref|XP_782121.3| PREDICTED: collagen alpha-2(I) chain-like [Strongylocentrotus
           purpuratus]
          Length = 1459

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 88/157 (56%), Gaps = 12/157 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGP---------PGPQGIPGDEGKR 160
           G  GP G  G+ G +G  G++G  G+    G PG +GP          GP+G PGD+G +
Sbjct: 422 GSMGPSGLPGQRGFQGFPGIRGSPGKPGLDGQPGAIGPIGESGPIGTHGPKGQPGDQGLQ 481

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G KG+ G  G +G  GDEG RGP GD+G PG+ G  G +G+ GE G DG+PGR G  G  
Sbjct: 482 GSKGEKGSRGRRGSQGDEGHRGPPGDLGMPGQAGETGDEGVAGEEGDDGVPGRKGDHGPR 541

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G PG +G+ G +G  GPRG  G  G  G
Sbjct: 542 GLIGETGVKGPPGPHGSKGPRGANGPRGELGPKGQTG 578



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 88/177 (49%), Gaps = 12/177 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GPIG+ G IG  G  G  G++G +G+ G  G  G +G  GDEG RGP GD+G PG 
Sbjct: 454 PGAIGPIGESGPIGTHGPKGQPGDQGLQGSKGEKGSRGRRGSQGDEGHRGPPGDLGMPGQ 513

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G  GDEG  G +GD G PGR G  G  GL GE G+ G PG +G  G  G +G  G+ G 
Sbjct: 514 AGETGDEGVAGEEGDDGVPGRKGDHGPRGLIGETGVKGPPGPHGSKGPRGANGPRGELGP 573

Query: 232 PGTNG------------TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G  G              G KG  G RG +G  G  G  G   I     E  ++ P
Sbjct: 574 KGQTGDQGRPGGHGHRGPEGSKGKDGRRGKKGDEGDQGGKGEHGIPGVSGEKGAVGP 630



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 100/226 (44%), Gaps = 57/226 (25%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---- 152
             + G   ST E   PGL GP G++G+ G  G +G +G  G +G  G+ GPPG  G    
Sbjct: 709 TGLPGRKGSTGE---PGLLGPAGEQGKRGIDGALGDEGPAGGEGIDGLPGPPGSHGKIGL 765

Query: 153 -----IPG---------------------------DEGKRGPKGDMGYPGP---QGIPGD 177
                IPG                             G RGP G++G  G    +G+PG 
Sbjct: 766 MGLPGIPGYFGQSGGKGEKGEKGKVGSDGRDGDRGSRGTRGPHGELGKQGSAGNKGLPGI 825

Query: 178 EG---KRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G    RG  GD G  G  G+ G  G+P   GE G+ G PG NG  G  G  G  G+ G 
Sbjct: 826 QGLQADRGDSGDSGPTGSYGVTGEKGMPGFKGESGIVGKPGHNGYSGDKGATGERGRKGD 885

Query: 232 P---------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           P         G  G NGE+G +GP G RG  G++G PG P    Y+
Sbjct: 886 PGYRGNQGPIGRQGINGERGDSGPAGERGLHGLHGTPGEPGTAGYQ 931



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 84/154 (54%), Gaps = 6/154 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGYP 169
           G  G +G++G  G KG  G++G + ++G  G  GP G  G+ G++G  G KG+   +G P
Sbjct: 806 GPHGELGKQGSAGNKGLPGIQGLQADRGDSGDSGPTGSYGVTGEKGMPGFKGESGIVGKP 865

Query: 170 GPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  G  GD+   G+RG KGD GY G  G  GR G+ GE G  G  G  G+ G+ G  G P
Sbjct: 866 GHNGYSGDKGATGERGRKGDPGYRGNQGPIGRQGINGERGDSGPAGERGLHGLHGTPGEP 925

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  GT GT GE G  GP G  G+ G  G  G
Sbjct: 926 GTAGYQGTQGTKGEDGDQGPTGQLGEGGTAGTSG 959



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 85/165 (51%), Gaps = 12/165 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G++G  G  G +G  G  G+ G PG+ G  G  GI G   K GPKG  G PGP
Sbjct: 286 PGPDGETGRRGYRGETGPLGYHGNHGQPGFPGIKGERGHPGIHGYSPKEGPKGHAGIPGP 345

Query: 172 QGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           QG+   PG++G  GP G  G  G +GL G  G PG  G++G  G +G+ G  G  G  G 
Sbjct: 346 QGLLGPPGEKGDIGPAGGRGEKGTLGLRGEQGHPGPQGVEGPQGIHGVGGSTGPKGSSGD 405

Query: 229 DGIP---------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G P         G +G+ G  G+ G RG +G  GI G PG P +
Sbjct: 406 KGAPGPVGPPGEIGNDGSMGPSGLPGQRGFQGFPGIRGSPGKPGL 450



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 82/180 (45%), Gaps = 18/180 (10%)

Query: 87  WLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG 146
           +   YS  P    +GF   T+ +   G QGP G  G  G  G MG  G RG  G  G  G
Sbjct: 228 FFKYYSVFPYADEKGF---TRTWNIRGDQGPRGHPGRRGPMGSMGYYGNRGPPGEKGRQG 284

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPG 191
            PGP G  G  G RG  G +GY G  G PG  G               K GPKG  G PG
Sbjct: 285 SPGPDGETGRRGYRGETGPLGYHGNHGQPGFPGIKGERGHPGIHGYSPKEGPKGHAGIPG 344

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             GL G  G  G+ G  G  G  G  G+ G+ G PG  G+ G  G +G  G TGP+G+ G
Sbjct: 345 PQGLLGPPGEKGDIGPAGGRGEKGTLGLRGEQGHPGPQGVEGPQGIHGVGGSTGPKGSSG 404



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 83/165 (50%), Gaps = 15/165 (9%)

Query: 111 PPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           P GL GP G+KG+IG    +GE G  G RGE+G PG  G  GPQGI G  G  GPKG  G
Sbjct: 345 PQGLLGPPGEKGDIGPAGGRGEKGTLGLRGEQGHPGPQGVEGPQGIHGVGGSTGPKGSSG 404

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK----- 222
             G  G  G  G+ G  G MG     GL G+ G  G PG+ G PG+ G+DG PG      
Sbjct: 405 DKGAPGPVGPPGEIGNDGSMGP---SGLPGQRGFQGFPGIRGSPGKPGLDGQPGAIGPIG 461

Query: 223 ----DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                G  G  G PG  G  G KG  G RG RG  G  G  G P 
Sbjct: 462 ESGPIGTHGPKGQPGDQGLQGSKGEKGSRGRRGSQGDEGHRGPPG 506



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 88/187 (47%), Gaps = 30/187 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
           PG QG  G KGE G++G  G +G+ G +G PG +G PG  G  GDEG  G +GD G P  
Sbjct: 475 PGDQGLQGSKGEKGSRGRRGSQGDEGHRGPPGDLGMPGQAGETGDEGVAGEEGDDGVPGR 534

Query: 170 ----GPQGI---------PGDEGKRGPKGDMGYPGRIGLDGR---------------DGL 201
               GP+G+         PG  G +GP+G  G  G +G  G+               +G 
Sbjct: 535 KGDHGPRGLIGETGVKGPPGPHGSKGPRGANGPRGELGPKGQTGDQGRPGGHGHRGPEGS 594

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+ G  G  G  G  G  G+ G+PG  G  G  G  G  G TGP G  G  GI G  G 
Sbjct: 595 KGKDGRRGKKGDEGDQGGKGEHGIPGVSGEKGAVGPPGRIGTTGPVGPAGDGGIPGRNGP 654

Query: 262 PAICAYK 268
           P +  ++
Sbjct: 655 PGLKGHQ 661



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 85/180 (47%), Gaps = 24/180 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQG 152
           L    G      E  P G  GP GQ G+ G   +KGE G +G RG +G  G  GPPG  G
Sbjct: 450 LDGQPGAIGPIGESGPIGTHGPKGQPGDQGLQGSKGEKGSRGRRGSQGDEGHRGPPGDLG 509

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           +PG  G+ G +G  G  G  G+PG +G  GP+         GL G  G+ G PG  G  G
Sbjct: 510 MPGQAGETGDEGVAGEEGDDGVPGRKGDHGPR---------GLIGETGVKGPPGPHGSKG 560

Query: 213 RNGMDGIPGKDGLPGKDG------------IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G +G  G+ G  G+ G              G+ G +G +G  G  G++G  G +G+PG
Sbjct: 561 PRGANGPRGELGPKGQTGDQGRPGGHGHRGPEGSKGKDGRRGKKGDEGDQGGKGEHGIPG 620



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 99/249 (39%), Gaps = 60/249 (24%)

Query: 70  REREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQG---PIGQKGEIGA 126
           R R   Q +  H  P   L    +      +G      +   PG +G   P G  GE G 
Sbjct: 490 RGRRGSQGDEGHRGPPGDLGMPGQAGETGDEGVAGEEGDDGVPGRKGDHGPRGLIGETGV 549

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------------GKRGPKGDMGY 168
           KG  G  G +G +GA G  G  GP+G  GD+                  G+RG KGD G 
Sbjct: 550 KGPPGPHGSKGPRGANGPRGELGPKGQTGDQGRPGGHGHRGPEGSKGKDGRRGKKGDEGD 609

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLD------GRDGLPGEPGLDGIPGRNGMD----- 217
            G +G  G  G  G KG +G PGRIG        G  G+PG  G  G+ G  G D     
Sbjct: 610 QGGKGEHGIPGVSGEKGAVGPPGRIGTTGPVGPAGDGGIPGRNGPPGLKGHQGFDGSPGS 669

Query: 218 ----------------GIPGKDGLPGKDGI------------PGTNGTNGEKGMTGPRGN 249
                           G PG+ G PG  GI            PG  G+ GE G+ GP G 
Sbjct: 670 PGPPGPMGPEGNTGQKGRPGQAGDPGAVGIQGHGGENGPTGLPGRKGSTGEPGLLGPAGE 729

Query: 250 RGKSGINGV 258
           +GK GI+G 
Sbjct: 730 QGKRGIDGA 738



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 21/166 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +G  G +G+ G KGE G+ G  GEKGA   VGPPG  G     G  GP GD G PG  
Sbjct: 599 GRRGKKGDEGDQGGKGEHGIPGVSGEKGA---VGPPGRIGT---TGPVGPAGDGGIPGRN 652

Query: 173 GIPGDEGKRG------------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G PG +G +G            P G  G  G+ G  G+ G PG  G+ G  G NG  G+P
Sbjct: 653 GPPGLKGHQGFDGSPGSPGPPGPMGPEGNTGQKGRPGQAGDPGAVGIQGHGGENGPTGLP 712

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS---GINGVPGTPA 263
           G+ G  G+ G+ G  G  G++G+ G  G+ G +   GI+G+PG P 
Sbjct: 713 GRKGSTGEPGLLGPAGEQGKRGIDGALGDEGPAGGEGIDGLPGPPG 758



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 77/169 (45%), Gaps = 18/169 (10%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G +G +G  G  G  G+ G +G  G PG++GP G QG  G +G  G +G  G  G  G+P
Sbjct: 695 GAVGIQGHGGENGPTGLPGRKGSTGEPGLLGPAGEQGKRGIDGALGDEGPAGGEGIDGLP 754

Query: 176 GDEGKRGPKGDMGYPG------------------RIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G  G  G MG PG                  ++G DGRDG  G  G  G  G  G  
Sbjct: 755 GPPGSHGKIGLMGLPGIPGYFGQSGGKGEKGEKGKVGSDGRDGDRGSRGTRGPHGELGKQ 814

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G  G  GLPG  G+    G +G+ G TG  G  G+ G+ G  G   I  
Sbjct: 815 GSAGNKGLPGIQGLQADRGDSGDSGPTGSYGVTGEKGMPGFKGESGIVG 863



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 75/160 (46%), Gaps = 15/160 (9%)

Query: 110  CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
             PPGL G    KG+ G  G  GVKG  G  G  G  GP GP G  G+ G  GP+G  G  
Sbjct: 1053 SPPGLPGTDAPKGQQGTPGLEGVKGSLGYAGRNGERGPRGPPGETGETGNSGPRGFTGQI 1112

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR---------------N 214
            G  G  G++G+ GP+G  G  G +G  G +G PG  GL G  G                 
Sbjct: 1113 GLTGTSGNQGEMGPEGPKGPLGNLGDQGGNGEPGILGLQGFKGPPGYLGDVGDLGFRGVK 1172

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G  G  G  G  G  G PG  G  G+ G+ GPRG+ G+ G
Sbjct: 1173 GRIGEAGSIGARGPAGFPGLQGILGQFGIQGPRGDMGEKG 1212



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 30/176 (17%)

Query: 118 IGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            GQKG  G  G+   +G++G  GE          GP G+PG       KG  G PG  G 
Sbjct: 682 TGQKGRPGQAGDPGAVGIQGHGGEN---------GPTGLPGR------KGSTGEPGLLGP 726

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP-------- 226
            G++GKRG  G +G  G  G +G DGLPG PG  G  G  G+ GIPG  G          
Sbjct: 727 AGEQGKRGIDGALGDEGPAGGEGIDGLPGPPGSHGKIGLMGLPGIPGYFGQSGGKGEKGE 786

Query: 227 ----GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
               G DG  G  G+ G +G  G  G +G +G  G+PG   + A + +S    P  
Sbjct: 787 KGKVGSDGRDGDRGSRGTRGPHGELGKQGSAGNKGLPGIQGLQADRGDSGDSGPTG 842



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 79/175 (45%), Gaps = 26/175 (14%)

Query: 112  PGLQGPIGQKGEIGA---------------KGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            PG QGP G  G +G                +G MG  G  GEKG PG  G PG +G  G 
Sbjct: 988  PGPQGPFGLPGNLGHHGPPGPKGPLGPQGPQGLMGETGLLGEKGLPGTRGRPGSKGQQGT 1047

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +         G P P G+PG +  +G +G  G  G  G  G  G  GE G  G PG  G 
Sbjct: 1048 Q--------RGSPSPPGLPGTDAPKGQQGTPGLEGVKGSLGYAGRNGERGPRGPPGETGE 1099

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPAICAYK 268
             G  G  G  G+ G+ GT+G  GE G  GP+   GN G  G NG PG   +  +K
Sbjct: 1100 TGNSGPRGFTGQIGLTGTSGNQGEMGPEGPKGPLGNLGDQGGNGEPGILGLQGFK 1154



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 93/221 (42%), Gaps = 46/221 (20%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G QG  G++G+ G  GE G+ G  G  G PG  G  G QG  G++G +GP G +G  G
Sbjct: 894  PIGRQGINGERGDSGPAGERGLHGLHGTPGEPGTAGYQGTQGTKGEDGDQGPTGQLGEGG 953

Query: 171  PQGIP------------------------GDEGKRGPKGDMGYPGRI------------- 193
              G                          G++G  GP+G  G PG +             
Sbjct: 954  TAGTSGYIGVPGPAGGPGEPGLAGDDGAIGEDGLPGPQGPFGLPGNLGHHGPPGPKGPLG 1013

Query: 194  -----GLDGRDGLPGEPGLDGIPGRNGMDGIPG-KDGLPGKDGIPGTN---GTNGEKGMT 244
                 GL G  GL GE GL G  GR G  G  G + G P   G+PGT+   G  G  G+ 
Sbjct: 1014 PQGPQGLMGETGLLGEKGLPGTRGRPGSKGQQGTQRGSPSPPGLPGTDAPKGQQGTPGLE 1073

Query: 245  GPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI 285
            G +G+ G +G NG  G         E+ +  P   T Q+ +
Sbjct: 1074 GVKGSLGYAGRNGERGPRGPPGETGETGNSGPRGFTGQIGL 1114



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 6/103 (5%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            + + G   +  E  P G +GP+G  G+ G  GE G+ G +G KG PG +G  G  G  G 
Sbjct: 1112 IGLTGTSGNQGEMGPEGPKGPLGNLGDQGGNGEPGILGLQGFKGPPGYLGDVGDLGFRGV 1171

Query: 157  EGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRI 193
            +G+ G  G +G  GP G PG +      G +GP+GDMG  GR+
Sbjct: 1172 KGRIGEAGSIGARGPAGFPGLQGILGQFGIQGPRGDMGEKGRL 1214


>gi|41393113|ref|NP_958886.1| collagen, type I, alpha 1b precursor [Danio rerio]
 gi|34784485|gb|AAH58045.1| Collagen, type I, alpha 3 [Danio rerio]
          Length = 1449

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 85/178 (47%), Gaps = 21/178 (11%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      +  P G  GP+G +G  G  GE G +G RGE GA G VGPPG +G PG+   R
Sbjct: 424 GLQGPKGDAGPKGEPGPVGPQGLAGNAGEEGKRGARGEPGAAGPVGPPGARGAPGN---R 480

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G  G PGP G PG+ G  GP G  G  G  G  G  GLPG  G+ G PG  G DG  
Sbjct: 481 GLPGSDGAPGPLGAPGERGANGPMGAQGASGESGRPGEPGLPGSKGMTGAPGSPGPDGKA 540

Query: 221 GKD------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G                    G PG  G PG  GT+GE G  G RG  G +G  G PG
Sbjct: 541 GPSGAPGQDGRPGPPGPAGSRGAPGVMGFPGPKGTDGESGKPGERGLAGPTGPLGAPG 598



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 84/182 (46%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD- 165
           G  GP+G  GE GA G MG +G  GE G PG  G PG +G+      PG +GK GP G  
Sbjct: 487 GAPGPLGAPGERGANGPMGAQGASGESGRPGEPGLPGSKGMTGAPGSPGPDGKAGPSGAP 546

Query: 166 --------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-- 203
                               MG+PGP+G  G+ GK G +G  G  G +G  G+DG  G  
Sbjct: 547 GQDGRPGPPGPAGSRGAPGVMGFPGPKGTDGESGKPGERGLAGPTGPLGAPGKDGDIGSP 606

Query: 204 ----------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                     E G  G  G +G  G+PG  G  G+ G PG  G  GE G +GP G RG  
Sbjct: 607 GAPGPAGPAGEKGEQGSAGPSGFQGLPGAQGATGETGKPGEQGLPGEAGPSGPSGPRGDR 666

Query: 254 GI 255
           G 
Sbjct: 667 GF 668



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/109 (46%), Positives = 59/109 (54%), Gaps = 3/109 (2%)

Query: 163 KGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           KG+ G PG QG  GD G +   GP G  G  G  G +G+ G  GEPG  G  G  G  G 
Sbjct: 417 KGNNGDPGLQGPKGDAGPKGEPGPVGPQGLAGNAGEEGKRGARGEPGAAGPVGPPGARGA 476

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           PG  GLPG DG PG  G  GE+G  GP G +G SG +G PG P +   K
Sbjct: 477 PGNRGLPGSDGAPGPLGAPGERGANGPMGAQGASGESGRPGEPGLPGSK 525



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 68/141 (48%), Gaps = 21/141 (14%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
            ++G+ GA+GE G  G  GE GA    GPPGP G  G  G  GP G  G PGP G+ G  G
Sbjct: 890  KEGQRGARGEKGPAGRPGEAGA---AGPPGPSGERGSPGPDGPLGLAGAPGPPGVIGSRG 946

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPG------------------LDGIPGRNGMDGIPG 221
              G  G  G  G  GL G  G PG+ G                  L G PG  G +G PG
Sbjct: 947  IVGLPGQRGERGFGGLAGPSGEPGKQGPSGPVGERGPPGPMGPPGLSGAPGEAGREGNPG 1006

Query: 222  KDGLPGKDGIPGTNGTNGEKG 242
             DG+ G+DG PG  G  GE G
Sbjct: 1007 HDGVSGRDGPPGPKGDRGESG 1027



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 78/165 (47%), Gaps = 27/165 (16%)

Query: 106 TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK---------------GAPGVVGPPGP 150
           T +  P G  G  G  G +GA G  G  G  G K               GA G VGPPGP
Sbjct: 816 TGDSGPKGDAGAPGPAGPVGASGPQGPAGATGPKGARGGAGPPGATGFPGAAGRVGPPGP 875

Query: 151 QGIPG---------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            G  G          EG+RG +G+ G   P G PG+ G  GP G  G  G  G DG  GL
Sbjct: 876 SGASGPPGPTGPAGKEGQRGARGEKG---PAGRPGEAGAAGPPGPSGERGSPGPDGPLGL 932

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG  G+ G  G+ G+PG+ G  G  G+ G +G  G++G +GP
Sbjct: 933 AGAPGPPGVIGSRGIVGLPGQRGERGFGGLAGPSGEPGKQGPSGP 977



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 79/170 (46%), Gaps = 21/170 (12%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---------------EKGA 141
           +  QG    +     PGL G  G  G  G+ G  G  G  G                +GA
Sbjct: 504 MGAQGASGESGRPGEPGLPGSKGMTGAPGSPGPDGKAGPSGAPGQDGRPGPPGPAGSRGA 563

Query: 142 PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
           PGV+G PGP+G  G+ GK G +G  G  GP G PG +G  G  G  G  G  G  G  G 
Sbjct: 564 PGVMGFPGPKGTDGESGKPGERGLAGPTGPLGAPGKDGDIGSPGAPGPAGPAGEKGEQGS 623

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            G  G  G+PG  G  G  GK   PG+ G+PG  G +G    +GPRG+RG
Sbjct: 624 AGPSGFQGLPGAQGATGETGK---PGEQGLPGEAGPSGP---SGPRGDRG 667



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 40/73 (54%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  G  G PG+ G  GP+G  G+PG  GL G  G  G PGLDG  G  G+ G  G+ G P
Sbjct: 220 GEAGKAGRPGERGAAGPQGARGFPGTPGLPGIKGHRGFPGLDGAKGDAGIAGPKGEAGSP 279

Query: 227 GKDGIPGTNGTNG 239
           G+ G PG  G  G
Sbjct: 280 GEAGTPGAMGARG 292



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 74/203 (36%), Gaps = 72/203 (35%)

Query: 133 KGERGEKGAPGV------------VGPPGPQGIP------------GDEGKRGPKGDMGY 168
           KGE G  G PG+            VG PGP G              G+ G  GPKGD G 
Sbjct: 768 KGEPGAVGPPGLTGPRGGPGERGEVGAPGPAGFAGPPGGNGQPGAKGETGDSGPKGDAGA 827

Query: 169 PGPQGIPGDEGKRGPKGDMG---------------YPGRIGL------------------ 195
           PGP G  G  G +GP G  G               +PG  G                   
Sbjct: 828 PGPAGPVGASGPQGPAGATGPKGARGGAGPPGATGFPGAAGRVGPPGPSGASGPPGPTGP 887

Query: 196 ------------DGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGE 240
                        G  G PGE G  G PG +G  G PG D   GL G  G PG  G+ G 
Sbjct: 888 AGKEGQRGARGEKGPAGRPGEAGAAGPPGPSGERGSPGPDGPLGLAGAPGPPGVIGSRGI 947

Query: 241 KGMTGPRGNRGKSGINGVPGTPA 263
            G+ G RG RG  G+ G  G P 
Sbjct: 948 VGLPGQRGERGFGGLAGPSGEPG 970



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 81/211 (38%), Gaps = 66/211 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------- 162
            GL G  G  G IG++G +G+ G+RGE+G  G+    GP G PG +G  GP          
Sbjct: 931  GLAGAPGPPGVIGSRGIVGLPGQRGERGFGGLA---GPSGEPGKQGPSGPVGERGPPGPM 987

Query: 163  -----------KGDMGYPGPQGIPGDEGKRGPKGDMGYP--------------------- 190
                        G  G PG  G+ G +G  GPKGD G                       
Sbjct: 988  GPPGLSGAPGEAGREGNPGHDGVSGRDGPPGPKGDRGESGNSGPPGAPGAPGAPGPIGPS 1047

Query: 191  ------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG----------- 233
                  G  G  G  G  G  G  G  G  G  G  G+ G  G+ G+ G           
Sbjct: 1048 GKTGDRGEAGPAGPAGPSGPAGARGALGPAGPRGDRGEAGEAGERGMKGHRGLSGMPGVP 1107

Query: 234  ----TNGTNGEKGMTGPRGNRGKSGINGVPG 260
                T+G  G  G TGP G RG +G NG PG
Sbjct: 1108 GPPGTSGEQGPAGATGPAGPRGPAGSNGSPG 1138



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 37/68 (54%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G PG+ G  GP+G  G+PG  G+PG +G RG  G  G  G  G+ G  G  G PG  G P
Sbjct: 226 GRPGERGAAGPQGARGFPGTPGLPGIKGHRGFPGLDGAKGDAGIAGPKGEAGSPGEAGTP 285

Query: 212 GRNGMDGI 219
           G  G  G+
Sbjct: 286 GAMGARGL 293


>gi|296232327|ref|XP_002807820.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-2(VI) chain
           [Callithrix jacchus]
          Length = 1018

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 89/208 (42%), Gaps = 57/208 (27%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGP----- 162
           PPG +G  GQKG  G  GE G  G++G +G PG+ GP   PGP+GIPG +G++G      
Sbjct: 257 PPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGIPGFKGEKGEFGADG 316

Query: 163 ----------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE-- 204
                           KG +G  GP G  GD G RGP G  G  G  G  G  G  GE  
Sbjct: 317 RKGASGLAGKNGTDGQKGKLGRIGPPGCKGDPGNRGPDGYPGEAGSPGERGDQGGKGEPG 376

Query: 205 ----------PGLDGIPGRNGMDGIPGKDGL---------------------PGKDGIPG 233
                      G  G  G  G DG PG  GL                     PG  G PG
Sbjct: 377 RPGRRGPPGDSGAKGSKGYQGNDGAPGSPGLKGAKGGPGPRGPKGKPGRRGDPGTKGSPG 436

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            NGT GEKG  GP G RG +G  G  G 
Sbjct: 437 INGTKGEKGDPGPEGPRGLAGEVGNKGA 464



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 82/149 (55%), Gaps = 15/149 (10%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G KG RG+KGA G +G PG  G  G +G  G +G +G+PGP+GIPG +G++G  G  G  
Sbjct: 259 GPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGIPGFKGEKGEFGADGRK 318

Query: 191 GRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---- 243
           G  GL G+   DG  G+ G  G PG  G  G  G DG PG+ G PG  G  G KG     
Sbjct: 319 GASGLAGKNGTDGQKGKLGRIGPPGCKGDPGNRGPDGYPGEAGSPGERGDQGGKGEPGRP 378

Query: 244 --------TGPRGNRGKSGINGVPGTPAI 264
                   +G +G++G  G +G PG+P +
Sbjct: 379 GRRGPPGDSGAKGSKGYQGNDGAPGSPGL 407



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 86/201 (42%), Gaps = 56/201 (27%)

Query: 108 EYCPPGLQGPIGQKGEI------------GAKGEMGVKGERGEKGAPGVVGP-------- 147
           E   PG +G  G KGE             GAKG  G +G  G  G+PG+ G         
Sbjct: 359 EAGSPGERGDQGGKGEPGRPGRRGPPGDSGAKGSKGYQGNDGAPGSPGLKGAKGGPGPRG 418

Query: 148 ----------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------GPKGDMG 188
                     PG +G PG  G +G KGD         PG EG R         G KGD G
Sbjct: 419 PKGKPGRRGDPGTKGSPGINGTKGEKGD---------PGPEGPRGLAGEVGNKGAKGDRG 469

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGR---NGMDGIPGKDGLPGKDGI--PGTNGTNGEKGM 243
            PG  G  G  G PG+ G  G PG     G  G PG  G PG+ G   PG  G  GEKG 
Sbjct: 470 LPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFIYPGPRGAPGEKGE 529

Query: 244 TGPR---GNRGKSGINGVPGT 261
            GPR   G+RG  G+ G PGT
Sbjct: 530 PGPRGPEGSRGDFGLKGGPGT 550



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 65/121 (53%), Gaps = 5/121 (4%)

Query: 104 NSTK-EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           N TK E   PG +GP G  GE+G KG  G +G  G +G  G +G PG QG  GD G  GP
Sbjct: 438 NGTKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGP 497

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGI 219
           +GD G PGP+G PG  G   P G  G PG  G     G +G  G+ GL G PG  G  G 
Sbjct: 498 RGDSGQPGPKGDPGRPGFIYP-GPRGAPGEKGEPGPRGPEGSRGDFGLKGGPGTKGEKGE 556

Query: 220 P 220
           P
Sbjct: 557 P 557



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 82/178 (46%), Gaps = 27/178 (15%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +G  G  GE G  GERG++G  G  G PG +G PGD G +G K   GY G
Sbjct: 341 PPGCKGDPGNRGPDGYPGEAGSPGERGDQGGKGEPGRPGRRGPPGDSGAKGSK---GYQG 397

Query: 171 PQGIPGDEGKRGPK------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
             G PG  G +G K                  G  G PG  G  G  G PG  G  G+ G
Sbjct: 398 NDGAPGSPGLKGAKGGPGPRGPKGKPGRRGDPGTKGSPGINGTKGEKGDPGPEGPRGLAG 457

Query: 213 RNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  G  GLPG        G PG  G+ G+ G  GPRG+ G+ G  G PG P  
Sbjct: 458 EVGNKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGF 515



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 56/112 (50%), Gaps = 18/112 (16%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIP 220
           G PGP+G     G++G KG+MG PG  G  GR G P      G PG  GIPG  G  G  
Sbjct: 256 GPPGPKGY---RGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGIPGFKGEKGEF 312

Query: 221 GKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPA 263
           G DG  G  G+ G NGT+G+K         G  G  GNRG  G  G  G+P 
Sbjct: 313 GADGRKGASGLAGKNGTDGQKGKLGRIGPPGCKGDPGNRGPDGYPGEAGSPG 364



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG--ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           PG  GP G  G+ G KG+ G  G    G +GAPG  G PGP+G  G  G  G KG  G  
Sbjct: 492 PGDAGPRGDSGQPGPKGDPGRPGFIYPGPRGAPGEKGEPGPRGPEGSRGDFGLKGGPGTK 551

Query: 170 GPQGIPGD 177
           G +G P D
Sbjct: 552 GEKGEPAD 559



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 38/85 (44%), Gaps = 15/85 (17%)

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP G  GY G+ G  G  G PGEPG  G   R G  GI G  G PG  GIPG        
Sbjct: 256 GPPGPKGYRGQKGAKGNMGEPGEPGQKG---RQGDPGIEGPIGFPGPKGIPGF------- 305

Query: 242 GMTGPRGNRGKSGINGVPGTPAICA 266
                +G +G+ G +G  G   +  
Sbjct: 306 -----KGEKGEFGADGRKGASGLAG 325


>gi|42542708|gb|AAH66384.1| Collagen, type I, alpha 3 [Danio rerio]
          Length = 1449

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 85/178 (47%), Gaps = 21/178 (11%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      +  P G  GP+G +G  G  GE G +G RGE GA G VGPPG +G PG+   R
Sbjct: 424 GLQGPKGDAGPKGEPGPVGPQGLAGNAGEEGKRGARGEPGAAGPVGPPGARGAPGN---R 480

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G  G PGP G PG+ G  GP G  G  G  G  G  GLPG  G+ G PG  G DG  
Sbjct: 481 GLPGSDGAPGPLGAPGERGANGPMGAQGASGESGRPGEPGLPGSKGMTGAPGSPGPDGKA 540

Query: 221 GKD------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G                    G PG  G PG  GT+GE G  G RG  G +G  G PG
Sbjct: 541 GPSGAPGQDGRPGPPGPAGSRGAPGVMGFPGPKGTDGESGKPGERGLAGPTGPLGAPG 598



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 84/182 (46%), Gaps = 39/182 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD- 165
           G  GP+G  GE GA G MG +G  GE G PG  G PG +G+      PG +GK GP G  
Sbjct: 487 GAPGPLGAPGERGANGPMGAQGASGESGRPGEPGLPGSKGMTGAPGSPGPDGKAGPSGAP 546

Query: 166 --------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-- 203
                               MG+PGP+G  G+ GK G +G  G  G +G  G+DG  G  
Sbjct: 547 GQDGRPGPPGPAGSRGAPGVMGFPGPKGTDGESGKPGERGLAGPTGPLGAPGKDGDIGSP 606

Query: 204 ----------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                     E G  G  G +G  G+PG  G  G+ G PG  G  GE G +GP G RG  
Sbjct: 607 GAPGPAGPAGEKGEQGSAGPSGFQGLPGAQGATGETGKPGEQGLPGEAGPSGPSGPRGDR 666

Query: 254 GI 255
           G 
Sbjct: 667 GF 668



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/109 (46%), Positives = 59/109 (54%), Gaps = 3/109 (2%)

Query: 163 KGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           KG+ G PG QG  GD G +   GP G  G  G  G +G+ G  GEPG  G  G  G  G 
Sbjct: 417 KGNNGDPGLQGPKGDAGPKGEPGPVGPQGLAGNAGEEGKRGARGEPGAAGPVGPPGARGA 476

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           PG  GLPG DG PG  G  GE+G  GP G +G SG +G PG P +   K
Sbjct: 477 PGNRGLPGSDGAPGPLGAPGERGANGPMGAQGASGESGRPGEPGLPGSK 525



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 68/141 (48%), Gaps = 21/141 (14%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
            ++G+ GA+GE G  G  GE GA    GPPGP G  G  G  GP G  G PGP G+ G  G
Sbjct: 890  KEGQRGARGEKGPAGRPGEAGA---AGPPGPSGERGSPGPDGPLGLAGAPGPPGVIGSRG 946

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPG------------------LDGIPGRNGMDGIPG 221
              G  G  G  G  GL G  G PG+ G                  L G PG  G +G PG
Sbjct: 947  IVGLPGQRGERGFGGLAGPSGEPGKQGPSGPVGERGPPGPMGPPGLSGAPGEAGREGNPG 1006

Query: 222  KDGLPGKDGIPGTNGTNGEKG 242
             DG+ G+DG PG  G  GE G
Sbjct: 1007 HDGVSGRDGPPGPKGDRGESG 1027



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 78/165 (47%), Gaps = 27/165 (16%)

Query: 106 TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK---------------GAPGVVGPPGP 150
           T +  P G  G  G  G +GA G  G  G  G K               GA G VGPPGP
Sbjct: 816 TGDSGPKGDAGAPGPAGPVGASGPQGPAGATGPKGARGGAGPPGATGFPGAAGRVGPPGP 875

Query: 151 QGIPG---------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            G  G          EG+RG +G+ G   P G PG+ G  GP G  G  G  G DG  GL
Sbjct: 876 SGASGPPGPTGPAGKEGQRGARGEKG---PAGRPGEAGAAGPPGPSGERGSPGPDGPLGL 932

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG  G+ G  G+ G+PG+ G  G  G+ G +G  G++G +GP
Sbjct: 933 AGAPGPPGVIGSRGIVGLPGQRGERGFGGLAGPSGEPGKQGPSGP 977



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 77/188 (40%), Gaps = 57/188 (30%)

Query: 124 IG------------------AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-- 163
           +G                  AKGE G  G +G+ GAPG  GP G  G  G  G  GPK  
Sbjct: 792 VGAPGPAGFAGPPGGNGQPGAKGETGDSGPKGDAGAPGPAGPVGASGPQGPAGATGPKGA 851

Query: 164 ----------------GDMGYPGPQ---------GIPGDEGKRGPKGDMGYPGRIGLDGR 198
                           G +G PGP          G  G EG+RG +G+ G  GR      
Sbjct: 852 RGGAGPPGATGFPGAAGRVGPPGPSGASGPPGPTGPAGKEGQRGARGEKGPAGR------ 905

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
              PGE G  G PG +G  G PG D   GL G  G PG  G+ G  G+ G RG RG  G+
Sbjct: 906 ---PGEAGAAGPPGPSGERGSPGPDGPLGLAGAPGPPGVIGSRGIVGLPGQRGERGFGGL 962

Query: 256 NGVPGTPA 263
            G  G P 
Sbjct: 963 AGPSGEPG 970



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 40/73 (54%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  G  G PG+ G  GP+G  G+PG  GL G  G  G PGLDG  G  G+ G  G+ G P
Sbjct: 220 GEAGKAGRPGERGAAGPQGARGFPGTPGLPGIKGHRGFPGLDGSKGDAGIAGPKGEAGSP 279

Query: 227 GKDGIPGTNGTNG 239
           G+ G PG  G  G
Sbjct: 280 GEAGTPGAMGARG 292



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           GE G  G  GE+GA    GP G +G PG  G  G KG  G+PG  G  GD G  GPKG+ 
Sbjct: 220 GEAGKAGRPGERGA---AGPQGARGFPGTPGLPGIKGHRGFPGLDGSKGDAGIAGPKGEA 276

Query: 188 GYPGRIGLDG 197
           G PG  G  G
Sbjct: 277 GSPGEAGTPG 286



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 82/211 (38%), Gaps = 66/211 (31%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------- 162
            GL G  G  G IG++G +G+ G+RGE+G  G+    GP G PG +G  GP          
Sbjct: 931  GLAGAPGPPGVIGSRGIVGLPGQRGERGFGGLA---GPSGEPGKQGPSGPVGERGPPGPM 987

Query: 163  -----------KGDMGYPGPQGIPGDEGKRGPKGDMGYP--------------------- 190
                        G  G PG  G+ G +G  GPKGD G                       
Sbjct: 988  GPPGLSGAPGEAGREGNPGHDGVSGRDGPPGPKGDRGESGNSGPPGAPGAPGAPGPIGPS 1047

Query: 191  ------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG----------- 233
                  G  G  G  G  G  G+ G  G  G  G  G+ G  G+ G+ G           
Sbjct: 1048 GKTGDRGEAGPAGPAGPSGPAGVRGALGPAGPRGDRGEAGEAGERGMKGHRGLSGMPGVP 1107

Query: 234  ----TNGTNGEKGMTGPRGNRGKSGINGVPG 260
                T+G  G  G TGP G RG +G NG PG
Sbjct: 1108 GPPGTSGEQGPAGATGPAGPRGPAGSNGSPG 1138



 Score = 39.7 bits (91), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 37/68 (54%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G PG+ G  GP+G  G+PG  G+PG +G RG  G  G  G  G+ G  G  G PG  G P
Sbjct: 226 GRPGERGAAGPQGARGFPGTPGLPGIKGHRGFPGLDGSKGDAGIAGPKGEAGSPGEAGTP 285

Query: 212 GRNGMDGI 219
           G  G  G+
Sbjct: 286 GAMGARGL 293


>gi|348579009|ref|XP_003475274.1| PREDICTED: collagen alpha-1(XVII) chain-like [Cavia porcellus]
          Length = 1486

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 90/204 (44%), Gaps = 46/204 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------- 161
           PG +GP GQKG +G  G  G  G+RG +G  G+ G PGP G  G++G RG          
Sbjct: 599 PGPEGPKGQKGSVGDPGMEGPMGQRGREGPMGLRGEPGPPGF-GEKGDRGAAGEPGPQGP 657

Query: 162 --------PKGDM---------------------GYPGPQGIPGDEGKRGPKGDMGYPGR 192
                   PKG +                     G PG +G  G  G  GPKGD G  G 
Sbjct: 658 PGVPGSVGPKGSIGSPGPQGPPGFTGLQGLRGEVGLPGAKGDKGPVGAPGPKGDPGEKGP 717

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            GL G  G  G PG  G PG  G  G  G DGL G  G  G  G  G +G  GP G++GK
Sbjct: 718 RGLTGEPGTRGLPGAVGEPGAKGPMGPAGPDGLQGPRGEKGLTGAPGTRGPPGPSGDQGK 777

Query: 253 SGI------NGVPGTPAICAYKRE 270
            G+       G+PGTP     K E
Sbjct: 778 PGLTGPRGPQGLPGTPGRPGSKGE 801



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 86/200 (43%), Gaps = 59/200 (29%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           +G  G KG+MG +G +G++G PG  G PGP G PG EG +G KG +G PG +G  G  G+
Sbjct: 566 RGSPGPKGDMGSQGPKGDRGLPGTPGIPGPLGHPGPEGPKGQKGSVGDPGMEGPMGQRGR 625

Query: 181 RGP--------------KGDMG---------------------------------YPGRI 193
            GP              KGD G                                 + G  
Sbjct: 626 EGPMGLRGEPGPPGFGEKGDRGAAGEPGPQGPPGVPGSVGPKGSIGSPGPQGPPGFTGLQ 685

Query: 194 GLDGRDGLP---------GEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GL G  GLP         G PG  G PG     G+ G PG  GLPG  G PG  G  G  
Sbjct: 686 GLRGEVGLPGAKGDKGPVGAPGPKGDPGEKGPRGLTGEPGTRGLPGAVGEPGAKGPMGPA 745

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G  G +G RG+ G+ G PGT
Sbjct: 746 GPDGLQGPRGEKGLTGAPGT 765



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 69/127 (54%), Gaps = 6/127 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP--- 169
           GLQG  G+ G  GAKG+ G  G  G KG PG     GP+G+ G+ G RG  G +G P   
Sbjct: 683 GLQGLRGEVGLPGAKGDKGPVGAPGPKGDPG---EKGPRGLTGEPGTRGLPGAVGEPGAK 739

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G  G +G +GP+G+ G  G  G  G  G  G+ G  G+ G  G  G+PG  G PG  
Sbjct: 740 GPMGPAGPDGLQGPRGEKGLTGAPGTRGPPGPSGDQGKPGLTGPRGPQGLPGTPGRPGSK 799

Query: 230 GIPGTNG 236
           G PGT G
Sbjct: 800 GEPGTPG 806



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 15/91 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMG------VKGERGEKG---APGVVGPPGPQGIPGDEGKRGP 162
           PG +G  G  GE GAKG MG      ++G RGEKG   APG  GPPGP G  G  G  GP
Sbjct: 724 PGTRGLPGAVGEPGAKGPMGPAGPDGLQGPRGEKGLTGAPGTRGPPGPSGDQGKPGLTGP 783

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
           +G      PQG+PG  G+ G KG+ G PGRI
Sbjct: 784 RG------PQGLPGTPGRPGSKGEPGTPGRI 808



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 55/101 (54%), Gaps = 6/101 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G+KG  G  GE G +G  G  G PG  GP GP G  G +G RG KG  G PG 
Sbjct: 706 PGPKGDPGEKGPRGLTGEPGTRGLPGAVGEPGAKGPMGPAGPDGLQGPRGEKGLTGAPGT 765

Query: 172 QGIPG---DEGK---RGPKGDMGYPGRIGLDGRDGLPGEPG 206
           +G PG   D+GK    GP+G  G PG  G  G  G PG PG
Sbjct: 766 RGPPGPSGDQGKPGLTGPRGPQGLPGTPGRPGSKGEPGTPG 806


>gi|334333702|ref|XP_001377462.2| PREDICTED: collagen alpha-1(VII) chain-like [Monodelphis domestica]
          Length = 2249

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/194 (40%), Positives = 92/194 (47%), Gaps = 36/194 (18%)

Query: 101  GFCNSTKEYCPPGLQGPIGQK-----GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            G    T     PG  GP G K     G+ GA+GE G  G RGE G PG+ G  GP G PG
Sbjct: 1695 GLPGPTGPAGAPGASGPKGDKGDPGVGQPGARGERGDPGIRGENGRPGLEGDRGPAGPPG 1754

Query: 156  DEGKRGPKGDMGYPGPQG-------------------IPGDEGKRGPKGDMGYPGRIGLD 196
            + G+RG KGD+G PG +G                     GD G RG  GD G  G +GL 
Sbjct: 1755 NRGERGDKGDVGAPGLKGDKGDTAVIEGPPGPRGPKGEAGDRGLRGLDGDKGARGELGLP 1814

Query: 197  GRDGLPGEPGLDGIPGRNGMD------------GIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G+ GE G  G  G  G+             GIPG  GL GKDG+PG  G  GE G  
Sbjct: 1815 GEKGVKGELGDKGSAGSQGVRGPMGQKGESGDPGIPGASGLSGKDGVPGIPGEKGEAGYM 1874

Query: 245  GPRGNRGKSGINGV 258
            GPRG +G  G+ G 
Sbjct: 1875 GPRGPKGDRGLKGA 1888



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 92/167 (55%), Gaps = 15/167 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGYP 169
            GL G  G +GE+G  GE GVKGE G+KG+ G   V GP G +G  GD G  G  G  G  
Sbjct: 1800 GLDGDKGARGELGLPGEKGVKGELGDKGSAGSQGVRGPMGQKGESGDPGIPGASGLSGKD 1859

Query: 170  GPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDG---IPGRNG---MD 217
            G  GIPG++G+      RGPKGD G  G  G DG  G  GE GL G   IPGR G     
Sbjct: 1860 GVPGIPGEKGEAGYMGPRGPKGDRGLKGACGQDGEKGDKGEAGLHGRPGIPGRKGDMGEM 1919

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G+PG  G PGK+G+ G  G  G  G  G +G++G+ G  G PG   I
Sbjct: 1920 GLPGLSGHPGKEGLIGPKGDRGFDGQQGSKGDQGEKGERGAPGVGGI 1966



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 12/148 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++GP+GQKGE G  G  G  G  G+ G PG+   PG +G  G  G RGPKGD G    +
Sbjct: 1833 GVRGPMGQKGESGDPGIPGASGLSGKDGVPGI---PGEKGEAGYMGPRGPKGDRGL---K 1886

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  G +G++G KG+ G  GR G+ GR G  GE GL       G+ G PGK+GL G  G  
Sbjct: 1887 GACGQDGEKGDKGEAGLHGRPGIPGRKGDMGEMGLP------GLSGHPGKEGLIGPKGDR 1940

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G +G  G KG  G +G RG  G+ G+ G
Sbjct: 1941 GFDGQQGSKGDQGEKGERGAPGVGGIQG 1968



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 91/184 (49%), Gaps = 37/184 (20%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGE-------------------RGEKGAPGVVGPPGPQ 151
            PPG +G  G KG++GA G  G KG+                   RG +G  G  G  G  
Sbjct: 1752 PPGNRGERGDKGDVGAPGLKGDKGDTAVIEGPPGPRGPKGEAGDRGLRGLDGDKGARGEL 1811

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------ 205
            G+PG++G +G  GD G  G QG+ G  G++G  GD G PG  GL G+DG+PG P      
Sbjct: 1812 GLPGEKGVKGELGDKGSAGSQGVRGPMGQKGESGDPGIPGASGLSGKDGVPGIPGEKGEA 1871

Query: 206  ------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                        GL G  G++G  G  G+ GL G+ GIPG  G  GE G+ G  G+ GK 
Sbjct: 1872 GYMGPRGPKGDRGLKGACGQDGEKGDKGEAGLHGRPGIPGRKGDMGEMGLPGLSGHPGKE 1931

Query: 254  GING 257
            G+ G
Sbjct: 1932 GLIG 1935



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 108/255 (42%), Gaps = 41/255 (16%)

Query: 31   NVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIRE--REKEQQNSTHNNPWVWL 88
               +R  R +D DKG   +  +P    V+    D      +  R    Q     +P +  
Sbjct: 1792 EAGDRGLRGLDGDKGARGELGLPGEKGVKGELGDKGSAGSQGVRGPMGQKGESGDPGIPG 1851

Query: 89   NAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP 148
             +     L    G      E    G  GP G KG+ G KG  G  GE+G+KG  G+ G P
Sbjct: 1852 ASG----LSGKDGVPGIPGEKGEAGYMGPRGPKGDRGLKGACGQDGEKGDKGEAGLHGRP 1907

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---P 205
            G   IPG   ++G  G+MG PG  G PG EG  GPKGD G+ G+ G  G  G  GE   P
Sbjct: 1908 G---IPG---RKGDMGEMGLPGLSGHPGKEGLIGPKGDRGFDGQQGSKGDQGEKGERGAP 1961

Query: 206  GLDGIPGRNGMD---------------------GIPGKDGLPGKD-----GIPGTNGTNG 239
            G+ GI G  G D                     G  G+ G PG+      G PG  G  G
Sbjct: 1962 GVGGIQGPRGSDGASGPPGPPGSVGPKGPEGIQGQKGERGPPGESVVGTRGAPGIPGERG 2021

Query: 240  EKGMTGPRGNRGKSG 254
            E+G  GP G RG+ G
Sbjct: 2022 EQGSIGPMGPRGEKG 2036



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 87/186 (46%), Gaps = 46/186 (24%)

Query: 121  KGEIGAKG-----EMGVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            KGE GA G      +G  G +GEKGAPG     +VG PG +G  G  G RG KG+ G PG
Sbjct: 1541 KGEPGATGLPGQAVVGPPGMKGEKGAPGGLAGDLVGEPGSKGDRGLPGPRGEKGEAGQPG 1600

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLD---------------------------------- 196
              G PG++G++G  G  G  G +G+                                   
Sbjct: 1601 EPGDPGEDGRKGAAGLRGEKGSMGVGIQGPPGSDGPPGLKGDSGLPGPPGPPGAPGVVGF 1660

Query: 197  -GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G  G  GEPG  G  G  G+ G PGK+G PG  G+PG  G  G  G +GP+G++G  G+
Sbjct: 1661 PGHAGPRGEPGQPGPSGERGLMGPPGKEGAPGPSGLPGPTGPAGAPGASGPKGDKGDPGV 1720

Query: 256  NGVPGT 261
             G PG 
Sbjct: 1721 -GQPGA 1725



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 83/175 (47%), Gaps = 53/175 (30%)

Query: 115 QGPIGQKGEIGAKGE-MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           +G  G+ GE G  GE MG+ G  G KG  G +GP GPQG PG      PKGD G PG  G
Sbjct: 800 RGEKGEPGEPGKPGEVMGLDGA-GVKGEKGNLGPEGPQGAPG------PKGDRGLPG-VG 851

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDG--------------------------------- 200
           +PGD    GPKG++G  G IGL GR G                                 
Sbjct: 852 VPGDP---GPKGELGDRGAIGLTGRAGPKGEVGASGDKGEPGRPGPPGPIGPRGRDGETG 908

Query: 201 -----LPGEPGLDGIPGRNGMDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPR 247
                 PGE GL G PG  G+ GIPG  G PG+    G PG +G NG  G+TGP+
Sbjct: 909 EKGDEGPGETGLPGKPGDRGLRGIPGIRGPPGEKGDQGDPGEDGRNGSPGLTGPK 963



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 82/201 (40%), Gaps = 67/201 (33%)

Query: 112  PGLQGP----------------IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            PGL GP                +     I   GE G KGE G+               PG
Sbjct: 957  PGLTGPKGDRGEPGPPGPPGRPVDAGPGIPGAGEKGTKGEAGD---------------PG 1001

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEG------------KRGPKGDMGYPGRIGLDGRDGLPG 203
            ++G RGPKGD G PG  G  G EG             RGP G+ G  G  G DGR+GL G
Sbjct: 1002 EDGARGPKGDAGPPGSPGERGTEGLRGPPGPRGEPGDRGPAGEKGERGTPGSDGRNGLDG 1061

Query: 204  EPGLDGIP---GRNGMDGIPGKDGL---------------------PGKDGIPGTNGTNG 239
            +PG  G P   G  G  G PG+DGL                     PG DG PG NG NG
Sbjct: 1062 KPGAIGPPGLRGDTGKTGEPGRDGLPGLRGEHGPPGPPGLPGVTGKPGDDGKPGLNGKNG 1121

Query: 240  EKGMTGPRGNRGKSGINGVPG 260
            E G  G  G +G  G  G PG
Sbjct: 1122 EPGDPGEDGRKGDKGEAGSPG 1142



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 84/191 (43%), Gaps = 54/191 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------------- 152
            PG +GP+G++G +G  GE G KG+RG+       GP GP G                   
Sbjct: 1257 PGERGPMGKEGPVGLTGERGSKGDRGD------TGPQGPPGHAHIERGPSGPPGQPGEPG 1310

Query: 153  ---IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL-------------- 195
               IPG  G+ G  G+ G       PG+ G+RG KG+ G  GR GL              
Sbjct: 1311 KPGIPGLPGRAGELGEAGR------PGERGERGEKGERGEQGRDGLPGPPGPPGPKVDME 1364

Query: 196  ---DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---TGPRGN 249
                G  G PG PGL G  G  G DG  G  G  G+ G  G  G  GEKG     GP G 
Sbjct: 1365 GTISGISGEPGPPGLRGAKGEPGRDGERGPKGDKGEYGAKGDRGEAGEKGRDGSPGPSGE 1424

Query: 250  RGKSGINGVPG 260
            RG SG+ G PG
Sbjct: 1425 RGPSGLEGKPG 1435



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 78/164 (47%), Gaps = 32/164 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            GL+G  GQ GE G KGE G+ G  G    KG  G +G PG  G PG EG  GPKGD G+ 
Sbjct: 1884 GLKGACGQDGEKGDKGEAGLHGRPGIPGRKGDMGEMGLPGLSGHPGKEGLIGPKGDRGF- 1942

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------------------GIP 211
                    +G++G KGD G  G  G  G  G+ G  G D                  GI 
Sbjct: 1943 --------DGQQGSKGDQGEKGERGAPGVGGIQGPRGSDGASGPPGPPGSVGPKGPEGIQ 1994

Query: 212  GRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G+ G  G PG+   G  G  GIPG  G  G  G  GPRG +G++
Sbjct: 1995 GQKGERGPPGESVVGTRGAPGIPGERGEQGSIGPMGPRGEKGEA 2038



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 101/251 (40%), Gaps = 79/251 (31%)

Query: 97   VAMQGFCNS-TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            V M+G  +  + E  PPGL+G  G+ G  G +G  G KGE G KG  G  G  G  G PG
Sbjct: 1361 VDMEGTISGISGEPGPPGLRGAKGEPGRDGERGPKGDKGEYGAKGDRGEAGEKGRDGSPG 1420

Query: 156  DEGKRGPKGDMGYPGPQ------------------------------------------- 172
              G+RGP G  G PG Q                                           
Sbjct: 1421 PSGERGPSGLEGKPGNQGDPGPHGVPGLAGPPGPQGPSGLKGEPGEPGPPGRGLPGPPGV 1480

Query: 173  ----GIPGDEGKRGPKGDMGYPGRI---------GLDGRDG------------------L 201
                G PG  G  GP+G  G PG++         G DG+DG                   
Sbjct: 1481 MGLSGPPGSSGLVGPQGAPGLPGQVGETGKPGVTGRDGKDGERGAPGVPGPPGLSGPVGP 1540

Query: 202  PGEPGLDGIPGRN--GMDGIPGKDGLPG--KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             GEPG  G+PG+   G  G+ G+ G PG     + G  G+ G++G+ GPRG +G++G  G
Sbjct: 1541 KGEPGATGLPGQAVVGPPGMKGEKGAPGGLAGDLVGEPGSKGDRGLPGPRGEKGEAGQPG 1600

Query: 258  VPGTPAICAYK 268
             PG P     K
Sbjct: 1601 EPGDPGEDGRK 1611



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 93/225 (41%), Gaps = 62/225 (27%)

Query: 113  GLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGV---------------VGPPGPQGIP 154
            G +G  G  GE GA   KG+ G  G  GE+G  G+                G  G +G P
Sbjct: 992  GTKGEAGDPGEDGARGPKGDAGPPGSPGERGTEGLRGPPGPRGEPGDRGPAGEKGERGTP 1051

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP------------------------ 190
            G +G+ G  G  G  GP G+ GD GK G  G  G P                        
Sbjct: 1052 GSDGRNGLDGKPGAIGPPGLRGDTGKTGEPGRDGLPGLRGEHGPPGPPGLPGVTGKPGDD 1111

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT------------- 237
            G+ GL+G++G PG+PG DG  G  G  G PG+DG  G  G  G  GT             
Sbjct: 1112 GKPGLNGKNGEPGDPGEDGRKGDKGEAGSPGRDGRDGSKGDRGDVGTPGLQGPPGLPGPV 1171

Query: 238  -------NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
                    G  G  GP+G+RG++G  G  G P     K ES S++
Sbjct: 1172 GPPGQGFPGVAGSPGPKGDRGEAGARGEQGLPGERGLKGESGSVM 1216



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 59/117 (50%), Gaps = 12/117 (10%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGP-----------KGDMGYPGPQGIPGDEGKRGPK 184
           +G+KG PG  G  G  G PGD G+ GP           KG+ G+PG  G PG  G  G  
Sbjct: 549 QGQKGEPGATGQKGQAGPPGDPGRSGPPGPRGLPGGGEKGERGFPGVDGRPGSPGNPGSP 608

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G  G PGR G  G  G PG PG  G PG+ G     G  GLPGK G PG  G  G++
Sbjct: 609 GVTGSPGRPGSRGEAGEPGLPGQKGEPGKPGSV-TGGGAGLPGKKGEPGVQGDKGDR 664



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 82/213 (38%), Gaps = 64/213 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG-------------------------- 146
            GL GP G  G +G +G  G+ G+ GE G PGV G                          
Sbjct: 1482 GLSGPPGSSGLVGPQGAPGLPGQVGETGKPGVTGRDGKDGERGAPGVPGPPGLSGPVGPK 1541

Query: 147  -PPGPQGIPGDE--GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYPGRIGLDGRDGLP 202
              PG  G+PG    G  G KG+ G PG  G+ GD  G+ G KGD G PG  G  G  G P
Sbjct: 1542 GEPGATGLPGQAVVGPPGMKGEKGAPG--GLAGDLVGEPGSKGDRGLPGPRGEKGEAGQP 1599

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPG--------------------------------KDG 230
            GEPG  G  GR G  G+ G+ G  G                                  G
Sbjct: 1600 GEPGDPGEDGRKGAAGLRGEKGSMGVGIQGPPGSDGPPGLKGDSGLPGPPGPPGAPGVVG 1659

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             PG  G  GE G  GP G RG  G  G  G P 
Sbjct: 1660 FPGHAGPRGEPGQPGPSGERGLMGPPGKEGAPG 1692



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 58/114 (50%), Gaps = 13/114 (11%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGP-----------KGDMGYPGRIGLDGRDGLPGEP 205
           +G++G  G  G  G  G PGD G+ GP           KG+ G+PG  G  G  G PG P
Sbjct: 549 QGQKGEPGATGQKGQAGPPGDPGRSGPPGPRGLPGGGEKGERGFPGVDGRPGSPGNPGSP 608

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG--TNGEKGMTGPRGNRGKSGING 257
           G+ G PGR G  G  G+ GLPG+ G PG  G  T G  G+ G +G  G  G  G
Sbjct: 609 GVTGSPGRPGSRGEAGEPGLPGQKGEPGKPGSVTGGGAGLPGKKGEPGVQGDKG 662



 Score = 45.8 bits (107), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 86/238 (36%), Gaps = 90/238 (37%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-----------------------GPPG 149
            G  GP G +GE GA+GE G+ GERG KG  G V                       G   
Sbjct: 1183 GSPGPKGDRGEAGARGEQGLPGERGLKGESGSVMNLEQSLESLGIKVSTLRQIVREGAED 1242

Query: 150  PQGIP----GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM------------------ 187
              G P    G +G+ G +G MG  GP G+ G+ G +G +GD                   
Sbjct: 1243 FHGFPDRFRGQKGEPGERGPMGKEGPVGLTGERGSKGDRGDTGPQGPPGHAHIERGPSGP 1302

Query: 188  -------------GYPGRIGLDGRDGLPGEPG---------------------------- 206
                         G PGR G  G  G PGE G                            
Sbjct: 1303 PGQPGEPGKPGIPGLPGRAGELGEAGRPGERGERGEKGERGEQGRDGLPGPPGPPGPKVD 1362

Query: 207  ----LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                + GI G  G  G+ G  G PG+DG  G  G  GE G  G RG  G+ G +G PG
Sbjct: 1363 MEGTISGISGEPGPPGLRGAKGEPGRDGERGPKGDKGEYGAKGDRGEAGEKGRDGSPG 1420


>gi|299782465|ref|NP_001177685.1| collagen type V alpha-3a precursor [Danio rerio]
 gi|295815593|gb|ADG36304.1| collagen type V alpha-3a [Danio rerio]
          Length = 1887

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/163 (42%), Positives = 88/163 (53%), Gaps = 12/163 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGD 165
           PG+QG  G +G IG  GE G +G+ G +G PG+ GPPG      P G  G +G  G +G 
Sbjct: 757 PGIQGFPGPQGPIGLPGEKGPEGKPGMQGLPGIDGPPGHPGREGPPGEKGHQGLSGAQGP 816

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +GYPGP+G+ G +G RG KG  G        G DG PG  G  GI G  G +G PG  G 
Sbjct: 817 VGYPGPRGVKGADGVRGLKGSKGE------KGEDGFPGAKGEMGIKGDRGDNGSPGSRGE 870

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G +G  G +G  GE G  G  G +GK G+ G+PG P     K
Sbjct: 871 DGPEGPKGQSGPLGEPGSAGIAGEKGKLGVPGLPGYPGRQGSK 913



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/161 (44%), Positives = 84/161 (52%), Gaps = 18/161 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G  G  G  GE   KG +G  GA G VG PGP+G+ G +G RG KG  G  G 
Sbjct: 787 PGIDGPPGHPGREGPPGE---KGHQGLSGAQGPVGYPGPRGVKGADGVRGLKGSKGEKGE 843

Query: 172 QGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIPGK 222
            G PG +G+   +G +GD G PG  G DG +G        GEPG  GI G  G  G+PG 
Sbjct: 844 DGFPGAKGEMGIKGDRGDNGSPGSRGEDGPEGPKGQSGPLGEPGSAGIAGEKGKLGVPGL 903

Query: 223 DGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG+       G PGT G  GEKG  GP G  G  G  G
Sbjct: 904 PGYPGRQGSKGSVGFPGTAGLEGEKGKRGPAGQAGADGERG 944



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 96/211 (45%), Gaps = 66/211 (31%)

Query: 113  GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------- 152
            GL+G  G+KGE    GAKGEMG+KG+RG+ G+PG  G  GP+G                 
Sbjct: 833  GLKGSKGEKGEDGFPGAKGEMGIKGDRGDNGSPGSRGEDGPEGPKGQSGPLGEPGSAGIA 892

Query: 153  ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------------- 189
                      +PG  G++G KG +G+PG  G+ G++GKRGP G  G              
Sbjct: 893  GEKGKLGVPGLPGYPGRQGSKGSVGFPGTAGLEGEKGKRGPAGQAGADGERGPNGARGGR 952

Query: 190  --------PGRIGLDGRDGLP---GEPGLDGIPGRNG------------MDGIPGKDGLP 226
                    PG  G  G DG P   GE G  G  GRNG             DG+PG  G  
Sbjct: 953  GARGPTGKPGAKGSAGHDGPPGATGERGPQGPQGRNGEAGPKGPNGPPGKDGLPGHPGQR 1012

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G+ G  G  G  G  G+ GP+G  G++G  G
Sbjct: 1013 GEPGFQGKTGPPGPAGVVGPQGKTGETGPTG 1043



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 89/167 (53%), Gaps = 24/167 (14%)

Query: 100  QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            +GF  +T    PPGLQG   P G+KGE G  G MG  G+ G +G  G +G  GPQG+PG 
Sbjct: 1249 RGFKGAT---GPPGLQGMPGPPGEKGESGHVGSMGPPGQHGPRGPQGAIGGEGPQGMPGA 1305

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRI------------GLDGRDGL 201
             G+ G  G+ G  G  G PG+ G+    G KG++G  G              G+ G DG 
Sbjct: 1306 VGQPGVVGEKGEDGEAGNPGNVGETGLVGEKGEVGEKGDAGPPGAAGPPGIRGIPGSDGP 1365

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G PG  G PG +G  G PG +G+   DG PG  G NGE G +GP+G
Sbjct: 1366 KGNPGPLGFPGDSGPSGEPGVNGI---DGGPGAKGDNGEPGKSGPQG 1409



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 76/146 (52%), Gaps = 18/146 (12%)

Query: 138 EKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD-------- 186
           ++G PG+ G PGPQ   G+PG++G  G  G  G PG  G PG  G+ GP G+        
Sbjct: 753 QQGNPGIQGFPGPQGPIGLPGEKGPEGKPGMQGLPGIDGPPGHPGREGPPGEKGHQGLSG 812

Query: 187 ----MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
               +GYPG  G+ G DG+    GL G  G  G DG PG  G  G  G  G NG+ G +G
Sbjct: 813 AQGPVGYPGPRGVKGADGV---RGLKGSKGEKGEDGFPGAKGEMGIKGDRGDNGSPGSRG 869

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYK 268
             GP G +G+SG  G PG+  I   K
Sbjct: 870 EDGPEGPKGQSGPLGEPGSAGIAGEK 895



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 84/188 (44%), Gaps = 48/188 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G  G  GA GE G KG+RG  G PG         +PG++G RG +G  G  GP
Sbjct: 637 PGKRGRSGADGGRGAPGETGAKGDRGFDGLPG---------LPGNKGHRGDRGKPGPQGP 687

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGR------------------DGL------------ 201
            G PG +G  GP G  G PG  G+ G                   DG+            
Sbjct: 688 HGEPGHKGSDGPVGPRGQPGEPGIRGLVGPRGPPGPPGQQGIQGVDGVQGPKGNLGPLGE 747

Query: 202 ------PGEPGLDGIPGRNGMDGIPGK---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                  G PG+ G PG  G  G+PG+   +G PG  G+PG +G  G  G  GP G +G 
Sbjct: 748 PGPPGQQGNPGIQGFPGPQGPIGLPGEKGPEGKPGMQGLPGIDGPPGHPGREGPPGEKGH 807

Query: 253 SGINGVPG 260
            G++G  G
Sbjct: 808 QGLSGAQG 815



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 79/143 (55%), Gaps = 9/143 (6%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+ G  G +G  G KG+ GE+G  G  GPPG QG+PG  G++G  G +G  GP   PG  
Sbjct: 1229 GEPGLRGQQGMYGPKGDEGERGFKGATGPPGLQGMPGPPGEKGESGHVGSMGP---PGQH 1285

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G RGP+G       IG +G  G+PG  G  G+ G  G DG  G  G  G+ G+ G  G  
Sbjct: 1286 GPRGPQG------AIGGEGPQGMPGAVGQPGVVGEKGEDGEAGNPGNVGETGLVGEKGEV 1339

Query: 239  GEKGMTGPRGNRGKSGINGVPGT 261
            GEKG  GP G  G  GI G+PG+
Sbjct: 1340 GEKGDAGPPGAAGPPGIRGIPGS 1362



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 87/211 (41%), Gaps = 69/211 (32%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------VGPPGPQGIPGDEGKR 160
            G +GP GQ G +G  G  G+ GE+G+ G PG+            VG PG  G+ G++GKR
Sbjct: 872  GPEGPKGQSGPLGEPGSAGIAGEKGKLGVPGLPGYPGRQGSKGSVGFPGTAGLEGEKGKR 931

Query: 161  GPKGDMGYPGPQGI---------------------------PGDEGKRGPKGDMGYPGRI 193
            GP G  G  G +G                            PG  G+RGP+G  G  G  
Sbjct: 932  GPAGQAGADGERGPNGARGGRGARGPTGKPGAKGSAGHDGPPGATGERGPQGPQGRNGEA 991

Query: 194  ------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG-------------------- 227
                  G  G+DGLPG PG  G PG  G  G PG  G+ G                    
Sbjct: 992  GPKGPNGPPGKDGLPGHPGQRGEPGFQGKTGPPGPAGVVGPQGKTGETGPTGDRGHPGAP 1051

Query: 228  ----KDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                + G+PG  G  G KG  GP G  GKSG
Sbjct: 1052 GPPGEQGLPGAAGKEGTKGDPGPAGQPGKSG 1082



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 85/218 (38%), Gaps = 66/218 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK------------GAPGVVGPPGPQGIPGDEGK 159
            PG  G  G+KG+ G  G+ G  GERG              G PG  G  G  G PG  G+
Sbjct: 919  PGTAGLEGEKGKRGPAGQAGADGERGPNGARGGRGARGPTGKPGAKGSAGHDGPPGATGE 978

Query: 160  RGPKGDM---------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            RGP+G                       G+PG +G PG +GK GP G  G  G  G  G 
Sbjct: 979  RGPQGPQGRNGEAGPKGPNGPPGKDGLPGHPGQRGEPGFQGKTGPPGPAGVVGPQGKTGE 1038

Query: 199  DGLPG------------EPGLDGIPGRNGMDGIPGKDGLPGKDG------------IPGT 234
             G  G            E GL G  G+ G  G PG  G PGK G            +PG 
Sbjct: 1039 TGPTGDRGHPGAPGPPGEQGLPGAAGKEGTKGDPGPAGQPGKSGPAGRRGFRGERGLPGI 1098

Query: 235  NGTNGEKGMTGP---------RGNRGKSGINGVPGTPA 263
             G++G KG  GP          G RG SG  G  G P 
Sbjct: 1099 LGSSGLKGGEGPLGVAGPIGATGERGSSGPAGAIGQPG 1136



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 63/133 (47%), Gaps = 24/133 (18%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR------------GPKGDMGYPG 191
           + GPPGP G+    G+ GP   +G PGP G+ GD G+             GP G  G  G
Sbjct: 588 LKGPPGPLGL---TGRPGP---VGLPGPSGLKGDIGENGPPGPRGLPGSAGPNGKPGKRG 641

Query: 192 RIGLDGRDGLPGEPG------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           R G DG  G PGE G       DG+PG  G  G  G  G PG  G  G  G  G  G  G
Sbjct: 642 RSGADGGRGAPGETGAKGDRGFDGLPGLPGNKGHRGDRGKPGPQGPHGEPGHKGSDGPVG 701

Query: 246 PRGNRGKSGINGV 258
           PRG  G+ GI G+
Sbjct: 702 PRGQPGEPGIRGL 714



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 86/198 (43%), Gaps = 45/198 (22%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP------------GVVGPPGPQGIPGDEGK 159
            PG +G  G  G  GA GE G +G +G  G              G+ G PG +G PG +GK
Sbjct: 961  PGAKGSAGHDGPPGATGERGPQGPQGRNGEAGPKGPNGPPGKDGLPGHPGQRGEPGFQGK 1020

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGD------------MGYPGRIGLDGRDGLPGEPGL 207
             GP G  G  GPQ   G  G+ GP GD             G PG     G++G  G+PG 
Sbjct: 1021 TGPPGPAGVVGPQ---GKTGETGPTGDRGHPGAPGPPGEQGLPGAA---GKEGTKGDPGP 1074

Query: 208  DGIPGRNG------------MDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGK 252
             G PG++G            + GI G  GL G +   G+ G  G  GE+G +GP G  G+
Sbjct: 1075 AGQPGKSGPAGRRGFRGERGLPGILGSSGLKGGEGPLGVAGPIGATGERGSSGPAGAIGQ 1134

Query: 253  SGINGVPGTPAICAYKRE 270
             G  G  G       K E
Sbjct: 1135 PGRQGGVGPAGPMGEKGE 1152



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 83/205 (40%), Gaps = 48/205 (23%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEM---------------GVKGERGEKGAPGVV 145
            G   S     PPG  G  G +G  G  GE                G  G+RGE G  G  
Sbjct: 962  GAKGSAGHDGPPGATGERGPQGPQGRNGEAGPKGPNGPPGKDGLPGHPGQRGEPGFQGKT 1021

Query: 146  GPPGPQGIPGDEGKRGPKGDMG---------YPGPQGIPGDEGKRGPKGD---MGYPGR- 192
            GPPGP G+ G +GK G  G  G          PG QG+PG  GK G KGD    G PG+ 
Sbjct: 1022 GPPGPAGVVGPQGKTGETGPTGDRGHPGAPGPPGEQGLPGAAGKEGTKGDPGPAGQPGKS 1081

Query: 193  --------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                                 GL G +G  G  G  G  G  G  G  G  G PG+ G  
Sbjct: 1082 GPAGRRGFRGERGLPGILGSSGLKGGEGPLGVAGPIGATGERGSSGPAGAIGQPGRQGGV 1141

Query: 233  GTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  GEKG  G +G+ G +G +G
Sbjct: 1142 GPAGPMGEKGEPGEKGSIGPAGRDG 1166



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 86/208 (41%), Gaps = 48/208 (23%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG--- 167
            P G+ GPIG  GE G+ G  G  G+ G +G  G  GP G +G PG++G  GP G  G   
Sbjct: 1110 PLGVAGPIGATGERGSSGPAGAIGQPGRQGGVGPAGPMGEKGEPGEKGSIGPAGRDGEQG 1169

Query: 168  ------------------YPGPQGIPGDEGKRGPK------------------------G 185
                                G  G PG +G +G K                        G
Sbjct: 1170 PVGLPGPAGPPGPPGDDGDKGETGGPGQKGSKGDKGEGGPPGPPGSQGPAGQPGPPGLDG 1229

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            + G  G+ G+ G  G  GE G  G  G  G+ G+PG  G  G+ G  G+ G  G+ G  G
Sbjct: 1230 EPGLRGQQGMYGPKGDEGERGFKGATGPPGLQGMPGPPGEKGESGHVGSMGPPGQHGPRG 1289

Query: 246  PRGNRGKSGINGVPGT---PAICAYKRE 270
            P+G  G  G  G+PG    P +   K E
Sbjct: 1290 PQGAIGGEGPQGMPGAVGQPGVVGEKGE 1317



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 85/227 (37%), Gaps = 63/227 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM---------GVKGERGEKGAPGVVGPPGP 150
            QG   +  +    G  GP GQ G+ G  G           G+ G  G KG  G +G  GP
Sbjct: 1057 QGLPGAAGKEGTKGDPGPAGQPGKSGPAGRRGFRGERGLPGILGSSGLKGGEGPLGVAGP 1116

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL--------- 201
             G  G+ G  GP G +G PG QG  G  G  G KG+ G  G IG  GRDG          
Sbjct: 1117 IGATGERGSSGPAGAIGQPGRQGGVGPAGPMGEKGEPGEKGSIGPAGRDGEQGPVGLPGP 1176

Query: 202  ------------------PGEPG---------------------------LDGIPGRNGM 216
                              PG+ G                           LDG PG  G 
Sbjct: 1177 AGPPGPPGDDGDKGETGGPGQKGSKGDKGEGGPPGPPGSQGPAGQPGPPGLDGEPGLRGQ 1236

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+ G  G  G+ G  G  G  G +GM GP G +G+SG  G  G P 
Sbjct: 1237 QGMYGPKGDEGERGFKGATGPPGLQGMPGPPGEKGESGHVGSMGPPG 1283



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 92/245 (37%), Gaps = 81/245 (33%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIG---------------------AKGEMGVKGERGEK 139
            GF   T    P G+ GP G+ GE G                     A G+ G KG+ G  
Sbjct: 1016 GFQGKTGPPGPAGVVGPQGKTGETGPTGDRGHPGAPGPPGEQGLPGAAGKEGTKGDPGPA 1075

Query: 140  GAPGVVGPPGPQ---------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G PG  GP G +         GI G  G +G +G +G  GP G  G+ G  GP G +G P
Sbjct: 1076 GQPGKSGPAGRRGFRGERGLPGILGSSGLKGGEGPLGVAGPIGATGERGSSGPAGAIGQP 1135

Query: 191  GR---IGLDGRDGLPGEPGLDGIPGRNGMDG---------------------IPGKDGLP 226
            GR   +G  G  G  GEPG  G  G  G DG                       G+ G P
Sbjct: 1136 GRQGGVGPAGPMGEKGEPGEKGSIGPAGRDGEQGPVGLPGPAGPPGPPGDDGDKGETGGP 1195

Query: 227  GKDG---------------------------IPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            G+ G                           + G  G  G++GM GP+G+ G+ G  G  
Sbjct: 1196 GQKGSKGDKGEGGPPGPPGSQGPAGQPGPPGLDGEPGLRGQQGMYGPKGDEGERGFKGAT 1255

Query: 260  GTPAI 264
            G P +
Sbjct: 1256 GPPGL 1260



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 61/124 (49%), Gaps = 27/124 (21%)

Query: 111  PPGLQGPIGQKGEIGAKGE---------------MGVKGERGEKGAPGVVGPPGPQGIPG 155
            P G+ G +GQ G +G KGE               +G KGE GEKG  G  G  GP GI G
Sbjct: 1299 PQGMPGAVGQPGVVGEKGEDGEAGNPGNVGETGLVGEKGEVGEKGDAGPPGAAGPPGIRG 1358

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
              G  GPKG+   PGP G PGD G           G  G++G DG PG  G +G PG++G
Sbjct: 1359 IPGSDGPKGN---PGPLGFPGDSGPS---------GEPGVNGIDGGPGAKGDNGEPGKSG 1406

Query: 216  MDGI 219
              G 
Sbjct: 1407 PQGA 1410


>gi|327281190|ref|XP_003225332.1| PREDICTED: collagen alpha-2(V) chain-like, partial [Anolis
           carolinensis]
          Length = 1466

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/150 (50%), Positives = 87/150 (58%), Gaps = 9/150 (6%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G +G++G  G  G KGE G KG PG  GP GP G  G+EGKRGP+GD G  G
Sbjct: 421 PQGSTGPPGIRGQMGDPGVPGFKGEAGPKGEPGPHGPQGPIGPVGEEGKRGPRGDPGSVG 480

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           P   PG  G+RGP G+ G+PG  GL G  G  GE GL G  G  G  G PG+ G P   G
Sbjct: 481 P---PGPLGERGPPGNRGFPGSDGLPGPKGAQGERGLAGASGPKGSQGDPGRTGEP---G 534

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +PG  G  G  G++GP    GKSG  G PG
Sbjct: 535 LPGARGLTGNPGVSGP---EGKSGPLGAPG 561



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 92/177 (51%), Gaps = 3/177 (1%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  G  G +GAKG  G  G  G  G+PG +G  GPQG  G  G RG  GD G PG +
Sbjct: 384 GLPGAPGTDGSMGAKGPTGSPGTSGPHGSPGPLGSTGPQGSTGPPGIRGQMGDPGVPGFK 443

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G +G+ GP G  G  G +G +G+ G  G+PG  G PG  G  G PG  G PG DG+P
Sbjct: 444 GEAGPKGEPGPHGPQGPIGPVGEEGKRGPRGDPGSVGPPGPLGERGPPGNRGFPGSDGLP 503

Query: 233 GTNGTNGEKGM---TGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           G  G  GE+G+   +GP+G++G  G  G PG P             P  ++  L  P
Sbjct: 504 GPKGAQGERGLAGASGPKGSQGDPGRTGEPGLPGARGLTGNPGVSGPEGKSGPLGAP 560



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/171 (44%), Positives = 95/171 (55%), Gaps = 27/171 (15%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G  GP G +G IG  GE   +G+RG +G PG VGPPGP       G+RGP G+ G
Sbjct: 445 EAGPKGEPGPHGPQGPIGPVGE---EGKRGPRGDPGSVGPPGPL------GERGPPGNRG 495

Query: 168 YPGPQGIPGDEGKR---------GPKGDMGYPGRI---GLDGRDGLPGEPGLDGIPGRNG 215
           +PG  G+PG +G +         GPKG  G PGR    GL G  GL G PG+ G  G++G
Sbjct: 496 FPGSDGLPGPKGAQGERGLAGASGPKGSQGDPGRTGEPGLPGARGLTGNPGVSGPEGKSG 555

Query: 216 MDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+DG PG  G       PG+ G  G KG++G  G  G++G  GVPG
Sbjct: 556 PLGAPGEDGRPGPAGPIGIRGQPGSMGLPGPKGISGDPGKAGEAGNAGVPG 606



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/166 (46%), Positives = 88/166 (53%), Gaps = 12/166 (7%)

Query: 101 GFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIP 154
           G   S  E  PPG   L GP+G +G  G +G +G +G    RG  G PG  GP GP GIP
Sbjct: 282 GATGSKGEPGPPGQMGLTGPMGPRGMAGERGRIGPQGAPGGRGSHGMPGKPGPMGPLGIP 341

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G  G  G  G  GP G  G EG +GP+G+ G PG  GL    GLPG PG DG  G  
Sbjct: 342 GSAGFPGVPGMKGEAGPTGARGPEGPQGPRGETGQPGPAGL---SGLPGAPGTDGSMGAK 398

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G PG     G  G PG  G+ G +G TGP G RG+ G  GVPG
Sbjct: 399 GPTGSPGTS---GPHGSPGPLGSTGPQGSTGPPGIRGQMGDPGVPG 441



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 93/184 (50%), Gaps = 24/184 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G PG   + GP GP+G+ G+ G+ GP+G  G 
Sbjct: 263 PGLKGHRGHKGLEGPKGEIGATGSKGEPGPPGQMGLTGPMGPRGMAGERGRIGPQGAPGG 322

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDG------------------LPGEPGL 207
            G  G+PG  G  GP    G  G+PG  G+ G  G                   PG  GL
Sbjct: 323 RGSHGMPGKPGPMGPLGIPGSAGFPGVPGMKGEAGPTGARGPEGPQGPRGETGQPGPAGL 382

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G+PG  G DG  G  G  G  G  G +G+ G  G TGP+G+ G  GI G  G P +  +
Sbjct: 383 SGLPGAPGTDGSMGAKGPTGSPGTSGPHGSPGPLGSTGPQGSTGPPGIRGQMGDPGVPGF 442

Query: 268 KRES 271
           K E+
Sbjct: 443 KGEA 446



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 79/149 (53%), Gaps = 18/149 (12%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP------GD 177
             G +G +G+ G+RGE+G PG+   PGP G PG +G  GP GD G  GP G P      G+
Sbjct: 956  TGQRGIVGMPGQRGERGMPGL---PGPAGTPGKQGSTGPPGDKGPSGPIGSPGATGPVGE 1012

Query: 178  EGKRGPKGDMGYPGRIGL---------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             G  GP G+ G PGR G           G  GLPG  G  G PG  G  G PG+ G PG 
Sbjct: 1013 AGPEGPAGNDGTPGRDGAVGERGDRGEHGPAGLPGSSGSPGTPGPVGPTGDPGQRGEPGS 1072

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G  G++G+ GP+G RG  G +G
Sbjct: 1073 RGPVGPPGRAGKRGLPGPQGPRGDKGDHG 1101



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 83/158 (52%), Gaps = 12/158 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY------PGPQ 172
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G       PGP 
Sbjct: 234 GEAGRSGQPGEVGFPGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGATGSKGEPGPP 293

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G  G  GP+G  G  GRIG  G  G  G  G+ G PG  G  GIPG  G PG  G+ 
Sbjct: 294 GQMGLTGPMGPRGMAGERGRIGPQGAPGGRGSHGMPGKPGPMGPLGIPGSAGFPGVPGMK 353

Query: 233 GTNGTNGEKGMTGPRGNRGK------SGINGVPGTPAI 264
           G  G  G +G  GP+G RG+      +G++G+PG P  
Sbjct: 354 GEAGPTGARGPEGPQGPRGETGQPGPAGLSGLPGAPGT 391



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 76/149 (51%), Gaps = 3/149 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G +G  GA G  G+KG RG K   G+ GP G  G  G +G+ GP G MG  GP 
Sbjct: 246 GFPGSPGARGFPGAPGLPGLKGHRGHK---GLEGPKGEIGATGSKGEPGPPGQMGLTGPM 302

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G  G+RG  G  G PG  G  G  G PG  G  GIPG  G  G+PG  G  G  G  
Sbjct: 303 GPRGMAGERGRIGPQGAPGGRGSHGMPGKPGPMGPLGIPGSAGFPGVPGMKGEAGPTGAR 362

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G TG  G  G SG+ G PGT
Sbjct: 363 GPEGPQGPRGETGQPGPAGLSGLPGAPGT 391



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/130 (45%), Positives = 72/130 (55%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G +G  G+ G  G KG +GE+G  G  GP G QG PG  G+ G  G  G  G  
Sbjct: 486 GERGPPGNRGFPGSDGLPGPKGAQGERGLAGASGPKGSQGDPGRTGEPGLPGARGLTGNP 545

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+ G EGK GP G  G  GR G  G  G+ G+PG  G+PG  G+ G PGK G  G  G+P
Sbjct: 546 GVSGPEGKSGPLGAPGEDGRPGPAGPIGIRGQPGSMGLPGPKGISGDPGKAGEAGNAGVP 605

Query: 233 GTNGTNGEKG 242
           G  G  G+ G
Sbjct: 606 GQRGAPGKDG 615



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 93/213 (43%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGP------ 162
           PG+ GP G+ G +GA GE G  G  G    +G PG +G PGP+GI GD GK G       
Sbjct: 545 PGVSGPEGKSGPLGAPGEDGRPGPAGPIGIRGQPGSMGLPGPKGISGDPGKAGEAGNAGV 604

Query: 163 ---------------------------KGDMGYPGP---------------------QGI 174
                                      +G+ G PGP                     QG+
Sbjct: 605 PGQRGAPGKDGEVGPSGPVGPPGPAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 664

Query: 175 PGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G  GP   +G+ G PG  G  G  G+PGE G+ G  G +G  G PG  G  G  G 
Sbjct: 665 PGDGGAPGPLGPRGERGNPGERGNPGTSGMPGEKGMAGGQGPDGPKGNPGPSGTSGDQGP 724

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 725 PGLQGMPGERGIAGTPGPKGDRGSIGEKGSEGT 757



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/181 (41%), Positives = 88/181 (48%), Gaps = 36/181 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKG----- 164
           G  GP G +G+ G  GE G+ G RG  G PGV GP    GP G PG++G+ GP G     
Sbjct: 516 GASGPKGSQGDPGRTGEPGLPGARGLTGNPGVSGPEGKSGPLGAPGEDGRPGPAGPIGIR 575

Query: 165 ----DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------------LPGEPGLD 208
                MG PGP+GI GD GK G  G+ G PG+ G  G+DG              GE G  
Sbjct: 576 GQPGSMGLPGPKGISGDPGKAGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGPAGERGEQ 635

Query: 209 GIPG------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G PG              G  G PG  G+PG  G PG  G  GE+G  G RGN G SG+ 
Sbjct: 636 GPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDGGAPGPLGPRGERGNPGERGNPGTSGMP 695

Query: 257 G 257
           G
Sbjct: 696 G 696



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 81/191 (42%), Gaps = 54/191 (28%)

Query: 124  IGAKGEMGVKGERGEKGAPGVV---GPPGPQGIPGDE----------------------- 157
            IG  G+ G  G RG+ GA G V   GP GP G  GD+                       
Sbjct: 899  IGEPGKEGPPGLRGDPGAHGRVGDRGPAGPAGSAGDKGDSGEDGQPGPDGPPGPAGTTGQ 958

Query: 158  -------GKRGPKGDMGYPGPQGIPGDEGKRGPKGD------MGYPGRIGLDGRDGLPGE 204
                   G+RG +G  G PGP G PG +G  GP GD      +G PG  G  G  G  G 
Sbjct: 959  RGIVGMPGQRGERGMPGLPGPAGTPGKQGSTGPPGDKGPSGPIGSPGATGPVGEAGPEGP 1018

Query: 205  PGLDGIPGRNGM------DGIPGKDGLPGKDGIPGT---------NGTNGEKGMTGPRGN 249
             G DG PGR+G        G  G  GLPG  G PGT          G  GE G  GP G 
Sbjct: 1019 AGNDGTPGRDGAVGERGDRGEHGPAGLPGSSGSPGTPGPVGPTGDPGQRGEPGSRGPVGP 1078

Query: 250  RGKSGINGVPG 260
             G++G  G+PG
Sbjct: 1079 PGRAGKRGLPG 1089



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 94/226 (41%), Gaps = 69/226 (30%)

Query: 101 GFCNSTKEYCPPGLQG------------PIGQKGEIGAKGEMGVKG-------------- 134
           G   ++ +  PPGLQG            P G +G IG KG  G  G              
Sbjct: 714 GPSGTSGDQGPPGLQGMPGERGIAGTPGPKGDRGSIGEKGSEGTAGNDGARGLPGPLGPG 773

Query: 135 -------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------IPGDEGKR 181
                  E+GE G  G+VGP G +G PG  G+ GP G +G+ GP G      + G+ G+ 
Sbjct: 774 GPAGPAGEKGEPGPRGLVGPAGSRGNPGSRGENGPTGPVGFAGPPGPDGQPGVKGEPGEP 833

Query: 182 GPKGDMGYPGRIGLDGRD---------------GLPGEPGLDGIPGRNGMD--------- 217
           G KGD G PG  GL G                 G  G PG  G PG  G           
Sbjct: 834 GQKGDAGSPGPQGLSGSHGPPGPSGVPGLKGGRGTKGPPGATGFPGSAGRVGPPGPTGAP 893

Query: 218 ------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                 G PGK+G PG  G PG +G  G++G  GP G+ G  G +G
Sbjct: 894 GPAGPIGEPGKEGPPGLRGDPGAHGRVGDRGPAGPAGSAGDKGDSG 939



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 72/164 (43%), Gaps = 42/164 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPG------------- 155
            PGL GP G  G+ G+ G  G KG  G  G+PG  GP    GP+G  G             
Sbjct: 974  PGLPGPAGTPGKQGSTGPPGDKGPSGPIGSPGATGPVGEAGPEGPAGNDGTPGRDGAVGE 1033

Query: 156  --DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
              D G+ GP    G PG  G PG  G  GP GD                  PG  G PG 
Sbjct: 1034 RGDRGEHGP---AGLPGSSGSPGTPGPVGPTGD------------------PGQRGEPGS 1072

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G PG+    GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1073 RGPVGPPGRA---GKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1113



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 75/197 (38%), Gaps = 57/197 (28%)

Query: 119  GQKGEIGAKGEMGV---------------KGERGEKGAPGVVGPPGPQG----------- 152
            GQKG+ G+ G  G+               KG RG KG PG  G PG  G           
Sbjct: 834  GQKGDAGSPGPQGLSGSHGPPGPSGVPGLKGGRGTKGPPGATGFPGSAGRVGPPGPTGAP 893

Query: 153  ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD------------ 196
                  G+ GK GP G  G PG  G  GD G  GP G  G  G  G D            
Sbjct: 894  GPAGPIGEPGKEGPPGLRGDPGAHGRVGDRGPAGPAGSAGDKGDSGEDGQPGPDGPPGPA 953

Query: 197  ---------------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                           G  G+PG PG  G PG+ G  G PG  G  G  G PG  G  GE 
Sbjct: 954  GTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKQGSTGPPGDKGPSGPIGSPGATGPVGEA 1013

Query: 242  GMTGPRGNRGKSGINGV 258
            G  GP GN G  G +G 
Sbjct: 1014 GPEGPAGNDGTPGRDGA 1030



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 49/90 (54%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G  G  G PG VGP G  G  G+ G RGP G  G  G 
Sbjct: 1025 PGRDGAVGERGDRGEHGPAGLPGSSGSPGTPGPVGPTGDPGQRGEPGSRGPVGPPGRAGK 1084

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1085 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1114



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 71/164 (43%), Gaps = 51/164 (31%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPKGDMGYPGPQGIPGDE 178
           G+ GA G +G +GERG    PG  G PG  G+PG++   G +GP G  G PGP G  GD+
Sbjct: 666 GDGGAPGPLGPRGERGN---PGERGNPGTSGMPGEKGMAGGQGPDGPKGNPGPSGTSGDQ 722

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G                         PGL G+PG  G+ G PG  G  G  G  G+ GT 
Sbjct: 723 GP------------------------PGLQGMPGERGIAGTPGPKGDRGSIGEKGSEGTA 758

Query: 239 G---------------------EKGMTGPRGNRGKSGINGVPGT 261
           G                     EKG  GPRG  G +G  G PG+
Sbjct: 759 GNDGARGLPGPLGPGGPAGPAGEKGEPGPRGLVGPAGSRGNPGS 802



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 88/226 (38%), Gaps = 84/226 (37%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGKRGPKGDMG 167
            +KGE G +G +G  G RG  G+ G  GP GP G            + G+ G+ G KGD G
Sbjct: 781  EKGEPGPRGLVGPAGSRGNPGSRGENGPTGPVGFAGPPGPDGQPGVKGEPGEPGQKGDAG 840

Query: 168  YPGPQGIPGD---------------EGKRGPKGDMGYPGRIG---------------LDG 197
             PGPQG+ G                 G +GP G  G+PG  G                 G
Sbjct: 841  SPGPQGLSGSHGPPGPSGVPGLKGGRGTKGPPGATGFPGSAGRVGPPGPTGAPGPAGPIG 900

Query: 198  RDGLPGEPGLDGIP------------------------------------------GRNG 215
              G  G PGL G P                                          G+ G
Sbjct: 901  EPGKEGPPGLRGDPGAHGRVGDRGPAGPAGSAGDKGDSGEDGQPGPDGPPGPAGTTGQRG 960

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            + G+PG+ G  G  G+PG  GT G++G TGP G++G SG  G PG 
Sbjct: 961  IVGMPGQRGERGMPGLPGPAGTPGKQGSTGPPGDKGPSGPIGSPGA 1006



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
           PG  GP G++G  G +G  G  G  GEKG  G  GP GP+G PG  G    +GP G  G 
Sbjct: 671 PGPLGPRGERGNPGERGNPGTSGMPGEKGMAGGQGPDGPKGNPGPSGTSGDQGPPGLQGM 730

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
           PG +GI G  G +G +G +G  G  G  G DG 
Sbjct: 731 PGERGIAGTPGPKGDRGSIGEKGSEGTAGNDGA 763



 Score = 43.5 bits (101), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 45/85 (52%), Gaps = 12/85 (14%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKRGPKG 164
            E+ P GL G  G  G  G  G  G  G+RGE G+ G VGPP   G +G+PG +G RG KG
Sbjct: 1039 EHGPAGLPGSSGSPGTPGPVGPTGDPGQRGEPGSRGPVGPPGRAGKRGLPGPQGPRGDKG 1098

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGY 189
            D          GD G RG KG  G+
Sbjct: 1099 DH---------GDRGDRGQKGHRGF 1114


>gi|410901501|ref|XP_003964234.1| PREDICTED: collagen alpha-1(IX) chain-like [Takifugu rubripes]
          Length = 928

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 86/155 (55%), Gaps = 18/155 (11%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           QGP G +G  GA G MG KGE G +G   + G PGPQG+ G  G RG +G +G PGP G 
Sbjct: 465 QGPTGPQGIRGATGLMGPKGEMGPRG---LDGDPGPQGVAGAIGDRGQRGVIGEPGPSGE 521

Query: 175 PGDEGKR------GPKGDMGYPGRIGLDGRDGLPGEPGLD------GIPGRNGMDGIPGK 222
            G +G R      GPKG+ G P   G+DGR+G+PG PG        G PG  G  G PG 
Sbjct: 522 KGTQGPRGITGVPGPKGEAGLP---GVDGREGIPGMPGAKGSIGKAGAPGEIGPQGFPGL 578

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG  G  G+ G  G+ G+ G  G+ GK+G  G
Sbjct: 579 PGSPGPKGTSGSKGDAGQPGLPGTMGSTGKTGERG 613



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 84/164 (51%), Gaps = 15/164 (9%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   +T    P G  GP G  G+ G +G  G  G+RG++G   V+G PGP G  G +G 
Sbjct: 471 QGIRGATGLMGPKGEMGPRGLDGDPGPQGVAGAIGDRGQRG---VIGEPGPSGEKGTQGP 527

Query: 160 RG------PKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           RG      PKG+ G PG    +GIPG  G +G  G  G PG IG  G  GLPG PG  G 
Sbjct: 528 RGITGVPGPKGEAGLPGVDGREGIPGMPGAKGSIGKAGAPGEIGPQGFPGLPGSPGPKGT 587

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G  G  G P   GLPG  G  G  G  GE+G  GP G  G+ G
Sbjct: 588 SGSKGDAGQP---GLPGTMGSTGKTGERGEQGEVGPVGPIGEPG 628



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 88/185 (47%), Gaps = 24/185 (12%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------A 141
             M G  +     CPPG  G     G  G KG  GVKG+ GE G                
Sbjct: 405 AGMLGSSDLCPNSCPPGTPG---HPGLPGMKGHKGVKGDAGEPGKQGHKGEEGEQGGPGE 461

Query: 142 PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            G  GP GPQGI G  G  GPKG+MG   P+G+ GD G +G  G +G  G+ G+ G  G 
Sbjct: 462 VGAQGPTGPQGIRGATGLMGPKGEMG---PRGLDGDPGPQGVAGAIGDRGQRGVIGEPGP 518

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            GE G  G  G  G+ G  G+ GLP   G++GIPG  G  G  G  G  G  G  G  G+
Sbjct: 519 SGEKGTQGPRGITGVPGPKGEAGLPGVDGREGIPGMPGAKGSIGKAGAPGEIGPQGFPGL 578

Query: 259 PGTPA 263
           PG+P 
Sbjct: 579 PGSPG 583



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 87/191 (45%), Gaps = 24/191 (12%)

Query: 92  SRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
            R  +  M G   S  +   PG  GP G  G  G+ G  G  G +G+ G PG+   PG  
Sbjct: 547 GREGIPGMPGAKGSIGKAGAPGEIGPQGFPGLPGSPGPKGTSGSKGDAGQPGL---PGTM 603

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG------------------RI 193
           G  G  G+RG +G++G  GP G PG+ G++GP G  G PG                    
Sbjct: 604 GSTGKTGERGEQGEVGPVGPIGEPGNIGQQGPLGPAGKPGARGPKGDPGLPGLPGPPGSR 663

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G  G  GEPG  G  G  G +G PG  G     G+ G  G  G  GE G  GP GNR
Sbjct: 664 GEKGERGESGEPGPKGDQGAQGDEGNPGDKGDVGDAGESGPKGEIGNLGEHGNRGPEGNR 723

Query: 251 GKSGINGVPGT 261
           G+ GI G  GT
Sbjct: 724 GQPGIEGPSGT 734



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 93/214 (43%), Gaps = 30/214 (14%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           +  QGF        P G  G  G  G+ G  G MG  G+ GE+G  G VGP GP G PG+
Sbjct: 570 IGPQGFPGLPGSPGPKGTSGSKGDAGQPGLPGTMGSTGKTGERGEQGEVGPVGPIGEPGN 629

Query: 157 EGKRGPKGDMGYPGPQGI---------------------------PGDEGKRGPKGDMGY 189
            G++GP G  G PG +G                            PG +G +G +GD G 
Sbjct: 630 IGQQGPLGPAGKPGARGPKGDPGLPGLPGPPGSRGEKGERGESGEPGPKGDQGAQGDEGN 689

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG     G  G  GE G  G  G  G  G  G +G  G+ GI G +GT G +GM G RG 
Sbjct: 690 PGD---KGDVGDAGESGPKGEIGNLGEHGNRGPEGNRGQPGIEGPSGTAGPRGMQGDRGA 746

Query: 250 RGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
            G  G  G PG      + ++ C  +     +QL
Sbjct: 747 PGVRGSQGPPGKEPSDQHIKQVCMRVMQEHLAQL 780



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 88/184 (47%), Gaps = 26/184 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGKRGPKGDM 166
           G  G +G +G  G +G  G +GA G++G             PG  G+PG +G +G KGD 
Sbjct: 382 GLPGAMGVRGPQGPRGPTGPRGAAGMLGSSDLCPNSCPPGTPGHPGLPGMKGHKGVKGDA 441

Query: 167 GYPGPQGIPGDEG---------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G PG QG  G+EG          +GP G  G  G  GL G  G  G  GLDG PG  G+ 
Sbjct: 442 GEPGKQGHKGEEGEQGGPGEVGAQGPTGPQGIRGATGLMGPKGEMGPRGLDGDPGPQGVA 501

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G  G  G   + G+ G  G +GEKG  GPRG  G  G  G  G P +    RE    +P 
Sbjct: 502 GAIGDRG---QRGVIGEPGPSGEKGTQGPRGITGVPGPKGEAGLPGVDG--REGIPGMPG 556

Query: 278 SETS 281
           ++ S
Sbjct: 557 AKGS 560



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 65/140 (46%), Gaps = 35/140 (25%)

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           I G +G+RG  G+ G+PGP G   D GK    G  G PG  G DG  G  GEPGLDG+PG
Sbjct: 291 INGIDGERGADGEDGFPGPDG---DAGK---PGSSGLPGIPGNDGLTGPIGEPGLDGLPG 344

Query: 213 RNGMDGIPGKDGLP--------------------GKDGIPGTNGTNGEKGMTGPRGNRGK 252
           + G  G PG  G                      GK G+PG  G  G +G  GP G RG 
Sbjct: 345 QKGEPGKPGPRGAAGVGPDGSPGPPGPGGLLGEMGKSGLPGAMGVRGPQGPRGPTGPRGA 404

Query: 253 SGINGV---------PGTPA 263
           +G+ G          PGTP 
Sbjct: 405 AGMLGSSDLCPNSCPPGTPG 424



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 65/150 (43%), Gaps = 29/150 (19%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           GE GA GE G  G  G+ G PG  G PG   IPG++G  GP G+ G  G  G  G+ GK 
Sbjct: 296 GERGADGEDGFPGPDGDAGKPGSSGLPG---IPGNDGLTGPIGEPGLDGLPGQKGEPGKP 352

Query: 182 GPKGDMGYP-----------------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD- 223
           GP+G  G                   G+ GL G  G+ G  G  G  G  G  G+ G   
Sbjct: 353 GPRGAAGVGPDGSPGPPGPGGLLGEMGKSGLPGAMGVRGPQGPRGPTGPRGAAGMLGSSD 412

Query: 224 --------GLPGKDGIPGTNGTNGEKGMTG 245
                   G PG  G+PG  G  G KG  G
Sbjct: 413 LCPNSCPPGTPGHPGLPGMKGHKGVKGDAG 442



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 95/247 (38%), Gaps = 73/247 (29%)

Query: 93  RIPLVA--MQGFCNSTKEYCPPGLQGPI---------GQKGEIGAKGEMGVKGERGEKGA 141
           R PL+   +   C++ +   PPG  GP          G  GE GA GE G  G  G+ G 
Sbjct: 256 RGPLLLLQLVLICSAQRSQEPPGPPGPPGPAGVPGINGIDGERGADGEDGFPGPDGDAGK 315

Query: 142 PGVVGPP---------GPQGIPGDEGKRGPKGDMGYPGPQ-------------------- 172
           PG  G P         GP G PG +G  G KG+ G PGP+                    
Sbjct: 316 PGSSGLPGIPGNDGLTGPIGEPGLDGLPGQKGEPGKPGPRGAAGVGPDGSPGPPGPGGLL 375

Query: 173 ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGL---------PGEPGLDGIPGRNGMD 217
                 G+PG  G RGP+G  G  G  G  G  G          PG PG  G+PG  G  
Sbjct: 376 GEMGKSGLPGAMGVRGPQGPRGPTGPRGAAGMLGSSDLCPNSCPPGTPGHPGLPGMKGHK 435

Query: 218 GIPGKDGLPGK------------------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G+ G  G PGK                   G  G  G  G  G+ GP+G  G  G++G P
Sbjct: 436 GVKGDAGEPGKQGHKGEEGEQGGPGEVGAQGPTGPQGIRGATGLMGPKGEMGPRGLDGDP 495

Query: 260 GTPAICA 266
           G   +  
Sbjct: 496 GPQGVAG 502


>gi|307189122|gb|EFN73578.1| Collagen alpha-1(V) chain [Camponotus floridanus]
          Length = 1688

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 89/189 (47%), Gaps = 24/189 (12%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG--------------------- 134
            ++  QG      +   PG  G  G  GE+G  GE G +G                     
Sbjct: 852  IIGPQGPAGEPGQPGEPGAPGSPGVPGEVGPSGEQGKEGPPGPSGLTGIKGPPGPSGLPG 911

Query: 135  ---ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
               ERG  G PG+ G  G  G  G  G  G KG  G PG  G+PG EGK+GPKG  G  G
Sbjct: 912  FPGERGLNGLPGMPGSKGEMGSIGAPGHPGDKGAQGEPGKDGVPGSEGKQGPKGKRGLIG 971

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              G  G  GLPG  G DG+PG+ G+ G PG  GLPG+DG  G  G  GEKG  G +G  G
Sbjct: 972  LKGEKGDSGLPGPIGRDGLPGQRGLPGSPGPVGLPGEDGDKGNVGPPGEKGFKGSQGEMG 1031

Query: 252  KSGINGVPG 260
              G  G+ G
Sbjct: 1032 LQGPQGIQG 1040



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/141 (46%), Positives = 86/141 (60%), Gaps = 3/141 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP+G +G +G  G  GVKG++G++G  G  G  G +G+ G++G  G KG+ G  GPQ
Sbjct: 629 GEQGPLGPQGTVGFPGVRGVKGDQGQRGPSGERGEKGERGLEGEKGDTGAKGEPGATGPQ 688

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           GIPG EG  GPKG  G  G  GL    GLPGE G  G+PG  G  G  G+ G  G+ G  
Sbjct: 689 GIPGLEGLEGPKGFEGPRGETGL---AGLPGEKGKIGVPGYAGFPGNVGEKGDKGQLGPQ 745

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G+NG  GE+G  G +G RG++
Sbjct: 746 GSNGDKGERGTNGMQGERGET 766



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 82/142 (57%), Gaps = 6/142 (4%)

Query: 125  GAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G KGE G  GE    G+ GAPG  GP G +G+PG  GK GP+G  G  G  G+PGD+G  
Sbjct: 1208 GVKGEPGKDGEDGPAGDPGAPGEAGPSGKEGLPGLPGKPGPEGPAGQQGNTGLPGDKGDI 1267

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTN 238
            GP G  G  G IG  G  GLPG PG  G+PG  G +G PG     G PG  G  G NG  
Sbjct: 1268 GPFGAPGPQGPIGPQGPSGLPGFPGERGLPGAAGENGPPGMSGAIGAPGMIGPVGPNGPK 1327

Query: 239  GEKGMTGPRGNRGKSGINGVPG 260
            G+KG  G +G+RG+ G +G+ G
Sbjct: 1328 GDKGRRGIKGHRGEPGRSGIKG 1349



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 97/219 (44%), Gaps = 45/219 (20%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            +  +GF         PG +GP G KG  G+ G  G  G+ G  GA   VGP GPQG+PG
Sbjct: 537 FIGSRGFPGLPGNPGIPGNEGPPGSKGNAGSPGLPGAPGQPGPVGA---VGPSGPQGLPG 593

Query: 156 ------------------------------------DEGKRGPKGDMGYPGPQGIPGDEG 179
                                               ++G  GP+G +G+PG +G+ GD+G
Sbjct: 594 PIGLVGPQGKPGIPGLSGADGPPGLPGNPGIPGMKGEQGPLGPQGTVGFPGVRGVKGDQG 653

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           +RGP G+ G  G  GL+G     G+ G  G PG  G  GIPG +GL G  G     G  G
Sbjct: 654 QRGPSGERGEKGERGLEGEK---GDTGAKGEPGATGPQGIPGLEGLEGPKGF---EGPRG 707

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
           E G+ G  G +GK G+ G  G P     K +   L P  
Sbjct: 708 ETGLAGLPGEKGKIGVPGYAGFPGNVGEKGDKGQLGPQG 746



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 96/184 (52%), Gaps = 24/184 (13%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV------------------KGERGEKGAP 142
           G   +     P GL GPIG  G  G  G  G+                  KGE+G  G  
Sbjct: 578 GPVGAVGPSGPQGLPGPIGLVGPQGKPGIPGLSGADGPPGLPGNPGIPGMKGEQGPLGPQ 637

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G VG PG +G+ GD+G+RGP G+ G  G +G+ G++G  G KG+ G  G  G+ G +GL 
Sbjct: 638 GTVGFPGVRGVKGDQGQRGPSGERGEKGERGLEGEKGDTGAKGEPGATGPQGIPGLEGLE 697

Query: 203 GEPGLDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGIN 256
           G  G +G  G  G+ G+P   GK G+PG  G PG  G  G+KG  GP+   G++G+ G N
Sbjct: 698 GPKGFEGPRGETGLAGLPGEKGKIGVPGYAGFPGNVGEKGDKGQLGPQGSNGDKGERGTN 757

Query: 257 GVPG 260
           G+ G
Sbjct: 758 GMQG 761



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 91/181 (50%), Gaps = 33/181 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL+GP G KG   A+G  G++G +GEKG  G+ GPPG  G  G +G++GP G  G  G  
Sbjct: 1115 GLKGPKGLKG---AEGSPGLEGRQGEKGDSGMAGPPGKPGAEGKQGEKGPPGAKGEEGKD 1171

Query: 173  GIPGDEGKR------GPKGDM------------------GYPGRIGLDGRDGLPGEPGLD 208
            G+ G  G R      GPKGD+                  G PG+ G DG  G PG PG  
Sbjct: 1172 GLIGSPGPRGLIGFEGPKGDIGLPGFPGPPGEPGLIGVKGEPGKDGEDGPAGDPGAPGEA 1231

Query: 209  GIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            G  G+ G+ G+PGK       G  G  G+PG  G  G  G  GP+G  G  G +G+PG P
Sbjct: 1232 GPSGKEGLPGLPGKPGPEGPAGQQGNTGLPGDKGDIGPFGAPGPQGPIGPQGPSGLPGFP 1291

Query: 263  A 263
             
Sbjct: 1292 G 1292



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 101/210 (48%), Gaps = 57/210 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            G+ GP G+ G  G +GE G  G +GE+G  G++G PGP+G+ G E   GPKGD+G PG  
Sbjct: 1142 GMAGPPGKPGAEGKQGEKGPPGAKGEEGKDGLIGSPGPRGLIGFE---GPKGDIGLPGFP 1198

Query: 172  -----------QGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMD 217
                       +G PG +G+ GP GD G PG  G  G++   GLPG+PG +G  G+ G  
Sbjct: 1199 GPPGEPGLIGVKGEPGKDGEDGPAGDPGAPGEAGPSGKEGLPGLPGKPGPEGPAGQQGNT 1258

Query: 218  GIPGKD------------------------GLPGKDGIPGTNGTNGEKGMT--------- 244
            G+PG                          G PG+ G+PG  G NG  GM+         
Sbjct: 1259 GLPGDKGDIGPFGAPGPQGPIGPQGPSGLPGFPGERGLPGAAGENGPPGMSGAIGAPGMI 1318

Query: 245  ------GPRGNRGKSGINGVPGTPAICAYK 268
                  GP+G++G+ GI G  G P     K
Sbjct: 1319 GPVGPNGPKGDKGRRGIKGHRGEPGRSGIK 1348



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 86/184 (46%), Gaps = 30/184 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            PPG +GPIG+ G  G  G  G+   +G  GE G PG  G PG  G+PG+ G  G +G  G
Sbjct: 831  PPGERGPIGESGLAGPSGTPGIIGPQGPAGEPGQPGEPGAPGSPGVPGEVGPSGEQGKEG 890

Query: 168  YPGPQGIPGDE---------------------GKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             PGP G+ G +                     G  G KG+MG  G  G  G  G  GEPG
Sbjct: 891  PPGPSGLTGIKGPPGPSGLPGFPGERGLNGLPGMPGSKGEMGSIGAPGHPGDKGAQGEPG 950

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             DG+PG        GK G  GK G+ G  G  G+ G+ GP G  G  G  G+PG+P    
Sbjct: 951  KDGVPGSE------GKQGPKGKRGLIGLKGEKGDSGLPGPIGRDGLPGQRGLPGSPGPVG 1004

Query: 267  YKRE 270
               E
Sbjct: 1005 LPGE 1008



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 89/165 (53%), Gaps = 18/165 (10%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G+ G  G++G  G  GE G  G  G KG PG++G P   G+PGD+G+RGP    G
Sbjct: 450 ERGPTGIPGREGRRGHPGRDGERGFTGPPGMKGEPGLIGLP---GLPGDKGERGPS---G 503

Query: 168 YPGPQGIPGDEGKRG---------PKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNG 215
            PG  G+PG EG +G           G++G  G IG  G  GLPG PG+   +G PG  G
Sbjct: 504 IPGEPGLPGHEGMQGEDGPPGLPGVPGELGPRGFIGSRGFPGLPGNPGIPGNEGPPGSKG 563

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG  G PG+ G  G  G +G +G+ GP G  G  G  G+PG
Sbjct: 564 NAGSPGLPGAPGQPGPVGAVGPSGPQGLPGPIGLVGPQGKPGIPG 608



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/142 (46%), Positives = 76/142 (53%), Gaps = 15/142 (10%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G  G+KGEMG  G  G  G  G  G PG  G+PG EGK+GPKG  G           
Sbjct: 920  GLPGMPGSKGEMGSIGAPGHPGDKGAQGEPGKDGVPGSEGKQGPKGKRGL---------I 970

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G +G KGD G PG I   GRDGLPG+ GL G PG  G+   PG+DG  G  G PG  G  
Sbjct: 971  GLKGEKGDSGLPGPI---GRDGLPGQRGLPGSPGPVGL---PGEDGDKGNVGPPGEKGFK 1024

Query: 239  GEKGMTGPRGNRGKSGINGVPG 260
            G +G  G +G +G  G  G PG
Sbjct: 1025 GSQGEMGLQGPQGIQGPRGEPG 1046



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/151 (47%), Positives = 89/151 (58%), Gaps = 3/151 (1%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK---GDMGYP 169
           G QG  G  GE G KGE G++GE+G+ GA G  G  GPQGIPG EG  GPK   G  G  
Sbjct: 650 GDQGQRGPSGERGEKGERGLEGEKGDTGAKGEPGATGPQGIPGLEGLEGPKGFEGPRGET 709

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G+PG++GK G  G  G+PG +G  G  G  G  G +G  G  G +G+ G+ G  G  
Sbjct: 710 GLAGLPGEKGKIGVPGYAGFPGNVGEKGDKGQLGPQGSNGDKGERGTNGMQGERGETGPR 769

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  GT G  GE+G+ GP+G+ G+ G  GVPG
Sbjct: 770 GFRGTRGRRGEEGLPGPKGDTGQPGSPGVPG 800



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 92/207 (44%), Gaps = 27/207 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------------MGVKGERGEKGAPG 143
           L+ + G      E  P G+ G  G  G  G +GE            +G +G  G +G PG
Sbjct: 486 LIGLPGLPGDKGERGPSGIPGEPGLPGHEGMQGEDGPPGLPGVPGELGPRGFIGSRGFPG 545

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDG 200
           +   PG  GIPG+EG  G KG+ G PG  G PG  G     GP G  G PG IGL G  G
Sbjct: 546 L---PGNPGIPGNEGPPGSKGNAGSPGLPGAPGQPGPVGAVGPSGPQGLPGPIGLVGPQG 602

Query: 201 LPGEPGLDGI---------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            PG PGL G          PG  GM G  G  G  G  G PG  G  G++G  GP G RG
Sbjct: 603 KPGIPGLSGADGPPGLPGNPGIPGMKGEQGPLGPQGTVGFPGVRGVKGDQGQRGPSGERG 662

Query: 252 KSGINGVPGTPAICAYKRESCSLLPNS 278
           + G  G+ G       K E  +  P  
Sbjct: 663 EKGERGLEGEKGDTGAKGEPGATGPQG 689



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 100/239 (41%), Gaps = 69/239 (28%)

Query: 92  SRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK------------ 139
            +I +    GF  +  E    G  GP G  G+ G +G  G++GERGE             
Sbjct: 719 GKIGVPGYAGFPGNVGEKGDKGQLGPQGSNGDKGERGTNGMQGERGETGPRGFRGTRGRR 778

Query: 140 ------------------GAPGVVGPPGPQ------------------GIPGDEGKRGPK 163
                             G PG  GPPG +                  G+PG  G+RGP 
Sbjct: 779 GEEGLPGPKGDTGQPGSPGVPGEFGPPGLEGPRGFVGPPGPPGLDGKDGVPGPPGERGPI 838

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMD 217
           G+ G  GP G PG  G +GP G+ G PG  G  G  G+P      GE G +G PG +G+ 
Sbjct: 839 GESGLAGPSGTPGIIGPQGPAGEPGQPGEPGAPGSPGVPGEVGPSGEQGKEGPPGPSGLT 898

Query: 218 GIP---------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           GI                G +GLPG  G  G  G+ G  G  G +G +G+ G +GVPG+
Sbjct: 899 GIKGPPGPSGLPGFPGERGLNGLPGMPGSKGEMGSIGAPGHPGDKGAQGEPGKDGVPGS 957



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 81/172 (47%), Gaps = 27/172 (15%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPG 176
           +KG+ G  GE G +GERG  G PG  G  G  G  G+ G  GP G  G PG     G+PG
Sbjct: 435 EKGDTGDVGEPGPRGERGPTGIPGREGRRGHPGRDGERGFTGPPGMKGEPGLIGLPGLPG 494

Query: 177 DEGKRGPK---GDMGYPGRIGLDGRD---------------------GLPGEPGLDGIPG 212
           D+G+RGP    G+ G PG  G+ G D                     G PG PG  GIPG
Sbjct: 495 DKGERGPSGIPGEPGLPGHEGMQGEDGPPGLPGVPGELGPRGFIGSRGFPGLPGNPGIPG 554

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  G  G PG  G PG  G  G  G +GP+G  G  G+ G  G P I
Sbjct: 555 NEGPPGSKGNAGSPGLPGAPGQPGPVGAVGPSGPQGLPGPIGLVGPQGKPGI 606



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/87 (52%), Positives = 54/87 (62%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P GL G  G++G  GA GE G  G  G  GAPG++GP GP G  GD+G+RG KG  G PG
Sbjct: 1284 PSGLPGFPGERGLPGAAGENGPPGMSGAIGAPGMIGPVGPNGPKGDKGRRGIKGHRGEPG 1343

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDG 197
              GI GD+G+ G KGD G PG  G  G
Sbjct: 1344 RSGIKGDQGETGEKGDRGLPGPEGFKG 1370



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 76/162 (46%), Gaps = 42/162 (25%)

Query: 129  EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
            E G+KG +G KGA         +G PG EG++G KGD G  GP G PG EGK+G KG   
Sbjct: 1113 ERGLKGPKGLKGA---------EGSPGLEGRQGEKGDSGMAGPPGKPGAEGKQGEKGP-- 1161

Query: 189  YPGRIGLDGRDGLPGEPGLDGI------------------------------PGRNGMDG 218
             PG  G +G+DGL G PG  G+                              PG++G DG
Sbjct: 1162 -PGAKGEEGKDGLIGSPGPRGLIGFEGPKGDIGLPGFPGPPGEPGLIGVKGEPGKDGEDG 1220

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G PG+ G  G  G  G  G  GP G  G+ G  G+PG
Sbjct: 1221 PAGDPGAPGEAGPSGKEGLPGLPGKPGPEGPAGQQGNTGLPG 1262



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 81/150 (54%), Gaps = 15/150 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G +G  G +G  G+ G++G+ G     G PGPQG     G +GP G  G+PG 
Sbjct: 1240 PGLPGKPGPEGPAGQQGNTGLPGDKGDIGP---FGAPGPQGP---IGPQGPSGLPGFPGE 1293

Query: 172  QGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGI------PGRNGMDGIPGK 222
            +G+PG  G+ GP    G +G PG IG  G +G  G+ G  GI      PGR+G+ G  G+
Sbjct: 1294 RGLPGAAGENGPPGMSGAIGAPGMIGPVGPNGPKGDKGRRGIKGHRGEPGRSGIKGDQGE 1353

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G  G  G+PG  G  G  G  GP G +G+
Sbjct: 1354 TGEKGDRGLPGPEGFKGNLGPIGPIGFKGE 1383



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 93/233 (39%), Gaps = 75/233 (32%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G    T     PG  GP G  G  G +G  G +G RGE G  G+ G  G  G+PG  
Sbjct: 668 GLEGEKGDTGAKGEPGATGPQGIPGLEGLEGPKGFEGPRGETGLAGLPGEKGKIGVPGYA 727

Query: 158 ---GKRGPKGDMGYPGPQGIPGDEGKR------------------------------GPK 184
              G  G KGD G  GPQG  GD+G+R                              GPK
Sbjct: 728 GFPGNVGEKGDKGQLGPQGSNGDKGERGTNGMQGERGETGPRGFRGTRGRRGEEGLPGPK 787

Query: 185 GDMGYPGRIG------------------------LDGRDGLPGEPGLDGIPGRNGMD--- 217
           GD G PG  G                        LDG+DG+PG PG  G  G +G+    
Sbjct: 788 GDTGQPGSPGVPGEFGPPGLEGPRGFVGPPGPPGLDGKDGVPGPPGERGPIGESGLAGPS 847

Query: 218 ---------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                          G PG+ G PG  G+PG  G +GE+G  GP G  G +GI
Sbjct: 848 GTPGIIGPQGPAGEPGQPGEPGAPGSPGVPGEVGPSGEQGKEGPPGPSGLTGI 900



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 66/137 (48%), Gaps = 23/137 (16%)

Query: 105  STKEYCP-----PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            S KE  P     PG +GP GQ+G  G  G+ G  G  G  G  G +GP GP G+PG  G+
Sbjct: 1234 SGKEGLPGLPGKPGPEGPAGQQGNTGLPGDKGDIGPFGAPGPQGPIGPQGPSGLPGFPGE 1293

Query: 160  RGPKGDMGYPGPQGIPG------------------DEGKRGPKGDMGYPGRIGLDGRDGL 201
            RG  G  G  GP G+ G                  D+G+RG KG  G PGR G+ G  G 
Sbjct: 1294 RGLPGAAGENGPPGMSGAIGAPGMIGPVGPNGPKGDKGRRGIKGHRGEPGRSGIKGDQGE 1353

Query: 202  PGEPGLDGIPGRNGMDG 218
             GE G  G+PG  G  G
Sbjct: 1354 TGEKGDRGLPGPEGFKG 1370



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 94/231 (40%), Gaps = 78/231 (33%)

Query: 113  GLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPGVVGPPGPQG------IP 154
            G QGP G++G IG KGE G            + G+RG  G+PG VG PG  G       P
Sbjct: 959  GKQGPKGKRGLIGLKGEKGDSGLPGPIGRDGLPGQRGLPGSPGPVGLPGEDGDKGNVGPP 1018

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEG------------------KRGPKGDMGYPGRI--- 193
            G++G +G +G+MG  GPQGI G  G                  +RG KG++G  G     
Sbjct: 1019 GEKGFKGSQGEMGLQGPQGIQGPRGEPGLIGPPGEKGPPGEVGQRGLKGEIGPVGATGSA 1078

Query: 194  ------------------------------------GLDGRDGLPGEPGLDGIPGRNGMD 217
                                                GL G  GL G  G  G+ GR G  
Sbjct: 1079 GPIGPQGLPGPPGVKGEVGDFGTVGPMGPPGTPGERGLKGPKGLKGAEGSPGLEGRQGEK 1138

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G PGK   PG  G  GEKG  G +G  GK G+ G PG   +  ++
Sbjct: 1139 GDSGMAGPPGK---PGAEGKQGEKGPPGAKGEEGKDGLIGSPGPRGLIGFE 1186



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 50/86 (58%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            +G   +  E  PPG+ G IG  G IG  G  G KG++G +G  G  G PG  GI GD+G+
Sbjct: 1294 RGLPGAAGENGPPGMSGAIGAPGMIGPVGPNGPKGDKGRRGIKGHRGEPGRSGIKGDQGE 1353

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKG 185
             G KGD G PGP+G  G+ G  GP G
Sbjct: 1354 TGEKGDRGLPGPEGFKGNLGPIGPIG 1379



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 95/245 (38%), Gaps = 81/245 (33%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE------------------ 138
            V + G         PPG +G  G +GE+G +G  G++G RGE                  
Sbjct: 1003 VGLPGEDGDKGNVGPPGEKGFKGSQGEMGLQGPQGIQGPRGEPGLIGPPGEKGPPGEVGQ 1062

Query: 139  KGAPGVVGPPGPQG---------------IPGDEG---------------KRGPKGDMGY 168
            +G  G +GP G  G               + G+ G               +RG KG  G 
Sbjct: 1063 RGLKGEIGPVGATGSAGPIGPQGLPGPPGVKGEVGDFGTVGPMGPPGTPGERGLKGPKGL 1122

Query: 169  PGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G +G PG EG++G KGD G    PG+ G +G+ G  G PG  G  G++G+ G PG  GL
Sbjct: 1123 KGAEGSPGLEGRQGEKGDSGMAGPPGKPGAEGKQGEKGPPGAKGEEGKDGLIGSPGPRGL 1182

Query: 226  ------------------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                                          PGKDG  G  G  G  G  GP G  G  G+
Sbjct: 1183 IGFEGPKGDIGLPGFPGPPGEPGLIGVKGEPGKDGEDGPAGDPGAPGEAGPSGKEGLPGL 1242

Query: 256  NGVPG 260
             G PG
Sbjct: 1243 PGKPG 1247



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 86/214 (40%), Gaps = 66/214 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDM 166
            GL G  G KGE+G+ G  G  G++G +G PG  G PG +G  G +GKRG       KGD 
Sbjct: 920  GLPGMPGSKGEMGSIGAPGHPGDKGAQGEPGKDGVPGSEGKQGPKGKRGLIGLKGEKGDS 979

Query: 167  GYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIP 220
            G PGP    G+PG  G  G  G +G PG  G  G  G PGE G  G  G  G+    GI 
Sbjct: 980  GLPGPIGRDGLPGQRGLPGSPGPVGLPGEDGDKGNVGPPGEKGFKGSQGEMGLQGPQGIQ 1039

Query: 221  GKDGLP---------------GKDGIPGTNGTNG-------------------------- 239
            G  G P               G+ G+ G  G  G                          
Sbjct: 1040 GPRGEPGLIGPPGEKGPPGEVGQRGLKGEIGPVGATGSAGPIGPQGLPGPPGVKGEVGDF 1099

Query: 240  -------------EKGMTGPRGNRGKSGINGVPG 260
                         E+G+ GP+G +G  G  G+ G
Sbjct: 1100 GTVGPMGPPGTPGERGLKGPKGLKGAEGSPGLEG 1133


>gi|47215142|emb|CAG12433.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1321

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 88/181 (48%), Gaps = 25/181 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G +G  GQ+G+ G KGE G+KG+ G  G+PG+ G  GP+G PG   + GK G KG  G+ 
Sbjct: 206 GDKGDTGQEGDKGEKGETGLKGKEGPPGSPGLTGVRGPEGKPGKIGERGKLGSKGAKGHQ 265

Query: 170 GPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK- 222
           G  G  G  GK GP      KG  G  G +G  GR G  GEPG+ G  G  G  G  G+ 
Sbjct: 266 GHLGETGSVGKTGPPGFVGQKGSRGTIGHVGAPGRMGQQGEPGIAGYEGHQGPQGPIGRL 325

Query: 223 ---------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
                          +G PG  G  G +G  GE+G  G  G +G  G+ G  G P    +
Sbjct: 326 GPKGEKGEQGDDGKVEGPPGPQGDIGPSGDRGERGEPGDPGYKGDRGLRGQNGPPGKRGF 385

Query: 268 K 268
           K
Sbjct: 386 K 386



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 81/164 (49%), Gaps = 10/164 (6%)

Query: 115 QGPIGQKGEI---GAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPKGDMGY 168
           QG  G  G+    G KGE G+KG+ G  G+PG+ G  GP+G P   G+ GK G KG  G+
Sbjct: 205 QGDKGDTGQEGDKGEKGETGLKGKEGPPGSPGLTGVRGPEGKPGKIGERGKLGSKGAKGH 264

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G  G  G  GK GP G +G  G  G  G  G PG  G  G PG  G +G  G  G  G+
Sbjct: 265 QGHLGETGSVGKTGPPGFVGQKGSRGTIGHVGAPGRMGQQGEPGIAGYEGHQGPQGPIGR 324

Query: 229 DGIPGTNGTNGEKGMT----GPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G  G+ G      GP+G+ G SG  G  G P    YK
Sbjct: 325 LGPKGEKGEQGDDGKVEGPPGPQGDIGPSGDRGERGEPGDPGYK 368



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 83/168 (49%), Gaps = 11/168 (6%)

Query: 102 FCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------VKGERGEKGAPGVVGPP---GPQG 152
           F +S  +    G +G  G+KGE G KG+ G      + G RG +G PG +G     G +G
Sbjct: 201 FAHSQGDKGDTGQEGDKGEKGETGLKGKEGPPGSPGLTGVRGPEGKPGKIGERGKLGSKG 260

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
             G +G  G  G +G  GP G  G +G RG  G +G PGR+G  G  G+ G  G  G  G
Sbjct: 261 AKGHQGHLGETGSVGKTGPPGFVGQKGSRGTIGHVGAPGRMGQQGEPGIAGYEGHQGPQG 320

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G+ G  G DG     G  G +G  GP G+RG+ G  G PG
Sbjct: 321 PIGRLGPKGEKGEQGDDGK--VEGPPGPQGDIGPSGDRGERGEPGDPG 366



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/132 (48%), Positives = 76/132 (57%), Gaps = 3/132 (2%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           RG KG  G +GP GP G  G EGK+   GP G +G+PGPQG  G+ G+ GPKG  G  G 
Sbjct: 30  RGPKGLRGAIGPDGPTGESGLEGKKASDGPPGKLGFPGPQGKIGEPGEPGPKGFPGVQGP 89

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G  G+ G PGL G PG  G+ G  G+ G PGK G PG  G  GEKG  G  GN G+
Sbjct: 90  SGPLGDKGIAGVPGLPGPPGTVGLLGEVGQKGPPGKAGEPGLPGEPGEKGDIGNAGNIGE 149

Query: 253 SGINGVPGTPAI 264
            G+ G  G P +
Sbjct: 150 QGLIGQRGEPGL 161



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 80/153 (52%), Gaps = 18/153 (11%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P GL+G IG  G  G   E G++G++   G PG +G PGPQG  G+ G+         PG
Sbjct: 32  PKGLRGAIGPDGPTG---ESGLEGKKASDGPPGKLGFPGPQGKIGEPGE---------PG 79

Query: 171 PQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           P+G PG +G  GP GD G     G  G  G  GL GE G  G PG+ G  G+PG+   PG
Sbjct: 80  PKGFPGVQGPSGPLGDKGIAGVPGLPGPPGTVGLLGEVGQKGPPGKAGEPGLPGE---PG 136

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G  G  G  GE+G+ G RG  G  G  G  G
Sbjct: 137 EKGDIGNAGNIGEQGLIGQRGEPGLEGEAGPAG 169



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 83/208 (39%), Gaps = 58/208 (27%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY-- 168
           P G  G  G+K   G  G++G  G +G+ G P   G PGP+G PG +G  GP GD G   
Sbjct: 44  PTGESGLEGKKASDGPPGKLGFPGPQGKIGEP---GEPGPKGFPGVQGPSGPLGDKGIAG 100

Query: 169 ----------------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
                                 PG  G PG  G+ G KGD+G  G IG  G  G  GEPG
Sbjct: 101 VPGLPGPPGTVGLLGEVGQKGPPGKAGEPGLPGEPGEKGDIGNAGNIGEQGLIGQRGEPG 160

Query: 207 LDGIPGRNGMDGIP-------------------------------GKDGLPGKDGIPGTN 235
           L+G  G  G DG                                 G  G  G++G  G  
Sbjct: 161 LEGEAGPAGPDGAKVRYFPKHGPGNSRNGKHSFSSWCDIEFAHSQGDKGDTGQEGDKGEK 220

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G KG  GP G+ G +G+ G  G P 
Sbjct: 221 GETGLKGKEGPPGSPGLTGVRGPEGKPG 248



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 75/143 (52%), Gaps = 12/143 (8%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           ++GP G +G+IG  G+   +GERGE G PG  G  G +G  G  GKRG KG MG PGPQG
Sbjct: 340 VEGPPGPQGDIGPSGD---RGERGEPGDPGYKGDRGLRGQNGPPGKRGFKGGMGLPGPQG 396

Query: 174 IPGDEGKRGPKGDMGYPGRIGLD---------GRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G +G+ G  G+ G+PG +G           G  G+ G  G  G  GR G+ G  G  G
Sbjct: 397 DAGTKGQPGDTGEQGFPGILGGFGPKGPPGDFGPKGIRGPKGPQGTMGRGGVVGPVGIIG 456

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR 247
             G  G  G  G  GE G  GPR
Sbjct: 457 PGGSAGPRGEKGNRGETGFQGPR 479



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 75/161 (46%), Gaps = 13/161 (8%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L G +GQKG  G  GE G+ GE GEKG  G  G  G QG+ G  G+ G +G+ G  GP G
Sbjct: 113 LLGEVGQKGPPGKAGEPGLPGEPGEKGDIGNAGNIGEQGLIGQRGEPGLEGEAGPAGPDG 172

Query: 174 I---------PGDE--GKRGPKG--DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                     PG+   GK       D+ +    G  G  G  G+ G  G  G  G +G P
Sbjct: 173 AKVRYFPKHGPGNSRNGKHSFSSWCDIEFAHSQGDKGDTGQEGDKGEKGETGLKGKEGPP 232

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  GL G  G  G  G  GE+G  G +G +G  G  G  G+
Sbjct: 233 GSPGLTGVRGPEGKPGKIGERGKLGSKGAKGHQGHLGETGS 273



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 53/135 (39%), Gaps = 48/135 (35%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI----------------- 153
           PPG QG IG  G+ G +GE G  G +G++G  G  GPPG +G                  
Sbjct: 343 PPGPQGDIGPSGDRGERGEPGDPGYKGDRGLRGQNGPPGKRGFKGGMGLPGPQGDAGTKG 402

Query: 154 -PGDEGKRG------------------PKGDMGYPGPQGIPG------------DEGKRG 182
            PGD G++G                  PKG  G  GPQG  G              G  G
Sbjct: 403 QPGDTGEQGFPGILGGFGPKGPPGDFGPKGIRGPKGPQGTMGRGGVVGPVGIIGPGGSAG 462

Query: 183 PKGDMGYPGRIGLDG 197
           P+G+ G  G  G  G
Sbjct: 463 PRGEKGNRGETGFQG 477


>gi|189237743|ref|XP_971465.2| PREDICTED: similar to AGAP011620-PA [Tribolium castaneum]
          Length = 1547

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 94/189 (49%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG++G  G  G  G KGE G  GE+G  G PG VGP GP G  G  G+RG +G  G PG 
Sbjct: 345 PGVKGHRGFPGLDGIKGEQGPPGEKGIPGNPGPVGPSGPVGPSGPRGERGREGPQGSPGL 404

Query: 171 --------PQGIPG------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                   P G+PG                  D G  GPKG  G  G  G  GR G PGE
Sbjct: 405 RGMDGIAGPPGLPGEMGKPGPPGFPGIPGAKGDHGSPGPKGSQGLQGPRGESGRPGQPGE 464

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            GL GIPG+   DG PG+ G PG  GI G  G  G +G+ G  G+ G+ G  G  G+P +
Sbjct: 465 TGLPGIPGK---DGSPGEKGNPGAPGISGPPGFPGVRGLPGVNGSPGQPGAKGNTGSPGV 521

Query: 265 CAYKRESCS 273
             YK ES +
Sbjct: 522 PGYKGESGA 530



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 92/183 (50%), Gaps = 15/183 (8%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQG 152
           L  ++G      E   PG  GP+G  G +G  G  G +G  G +G+PG+ G     GP G
Sbjct: 356 LDGIKGEQGPPGEKGIPGNPGPVGPSGPVGPSGPRGERGREGPQGSPGLRGMDGIAGPPG 415

Query: 153 IPGD---------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDG 200
           +PG+          G  G KGD G PGP+G  G +G RG  G  G PG  GL    G+DG
Sbjct: 416 LPGEMGKPGPPGFPGIPGAKGDHGSPGPKGSQGLQGPRGESGRPGQPGETGLPGIPGKDG 475

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGE G  G PG +G  G PG  GLPG +G PG  G  G  G  G  G +G+SG  G  G
Sbjct: 476 SPGEKGNPGAPGISGPPGFPGVRGLPGVNGSPGQPGAKGNTGSPGVPGYKGESGAKGETG 535

Query: 261 TPA 263
            P 
Sbjct: 536 APG 538



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 90/193 (46%), Gaps = 41/193 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------ 165
           PGL+G +G  G  G +G  G+ G +G  GAPG+VG PG +G PG +G++G +G       
Sbjct: 777 PGLKGNVGSPGPDGVQGPPGLPGAKGHSGAPGLVGLPGLRGQPGPQGEKGERGSIGPVGP 836

Query: 166 --------MGYPGPQGI---------------------------PGDEGKRGPKGDMGYP 190
                   +G  G QG+                           PG  G+RGP G  G  
Sbjct: 837 EGPPGRQVLGERGQQGLMGPPGPPGEPAERGEPGPPGLPGESGAPGAPGERGPVGSPGLQ 896

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G  G  GLPG  G  GIPG  GM G PG  G PG+ G PG  G  G KG  G  G R
Sbjct: 897 GFPGPQGLVGLPGLKGDRGIPGLKGMQGNPGHVGKPGEQGPPGPIGLTGAKGARGEAGTR 956

Query: 251 GKSGINGVPGTPA 263
           G +G+ G PG P 
Sbjct: 957 GDAGLMGPPGRPG 969



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 70/118 (59%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GE+G PGV GP G QG+PG  G +G  G  G PG QG PG  G  GP+G+ G+PG  G  
Sbjct: 712 GERGPPGVTGPRGFQGLPGTPGNQGMPGKDGEPGLQGPPGVPGNIGPRGERGFPGERGPV 771

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G+ G+PG  G  G PG +G+ G PG  G  G  G PG  G  G +G  GP+G +G+ G
Sbjct: 772 GQPGIPGLKGNVGSPGPDGVQGPPGLPGAKGHSGAPGLVGLPGLRGQPGPQGEKGERG 829



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 105/238 (44%), Gaps = 53/238 (22%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP GQ G+ G+ G  G KG  GE G PG VGP   QG+ G  G+ GP+G  G PG
Sbjct: 581 PDGAVGPKGQTGDRGSAGPPGPKGSLGEPGRPGAVGP---QGLRGLTGRPGPQGRSGPPG 637

Query: 171 PQGIPGDEGKRG---------------PKGDMGYPGRIGLD---------------GRDG 200
            +G+PG +GK G               P GD G  G  G D               G+DG
Sbjct: 638 ERGMPGADGKPGETGPQGLQGLPGPLGPPGDKGLQGEAGKDGEPGLPGPPGPRGDNGKDG 697

Query: 201 L---------------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                            G PG+ G  G  G+ G PG  G+PGKDG PG  G  G  G  G
Sbjct: 698 AMGPQGAPGPPGVDGERGPPGVTGPRGFQGLPGTPGNQGMPGKDGEPGLQGPPGVPGNIG 757

Query: 246 PRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVV 303
           PRG RG  G  G  G P I   K    S  P+     +  PP + G++   S +P +V
Sbjct: 758 PRGERGFPGERGPVGQPGIPGLKGNVGSPGPDG----VQGPPGLPGAKG-HSGAPGLV 810



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 77/175 (44%), Gaps = 30/175 (17%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G  G KG  G++G RGE G PG  G  G  GIPG +G  G KG+ G PG  G PG  
Sbjct: 436 GDHGSPGPKGSQGLQGPRGESGRPGQPGETGLPGIPGKDGSPGEKGNPGAPGISGPPGFP 495

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG----------- 227
           G RG  G  G PG+ G  G  G PG PG  G  G  G  G PG  GLPG           
Sbjct: 496 GVRGLPGVNGSPGQPGAKGNTGSPGVPGYKGESGAKGETGAPGPRGLPGVPGSEGKRGKR 555

Query: 228 -------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                                G+PG +G  G KG TG RG+ G  G  G  G P 
Sbjct: 556 GMRGPPGPGGPPGERGMPGARGLPGPDGAVGPKGQTGDRGSAGPPGPKGSLGEPG 610



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 71/152 (46%), Gaps = 33/152 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR-------- 160
           PG+ G  GQ G  G  G  GV G +GE GA G  G PGP+   G+PG EGKR        
Sbjct: 501 PGVNGSPGQPGAKGNTGSPGVPGYKGESGAKGETGAPGPRGLPGVPGSEGKRGKRGMRGP 560

Query: 161 -------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                              GP G +G  G  G  G  G  GPKG +G PGR G  G  GL
Sbjct: 561 PGPGGPPGERGMPGARGLPGPDGAVGPKGQTGDRGSAGPPGPKGSLGEPGRPGAVGPQGL 620

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
               GL G PG  G  G PG+ G+PG DG PG
Sbjct: 621 ---RGLTGRPGPQGRSGPPGERGMPGADGKPG 649



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 83/159 (52%), Gaps = 21/159 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           PGL+G  G  G  G  GEMG  G          +G+ G+      PGP+G  G +G RG 
Sbjct: 402 PGLRGMDGIAGPPGLPGEMGKPGPPGFPGIPGAKGDHGS------PGPKGSQGLQGPRGE 455

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            G  G PG  G+PG  GK G  G+ G PG  G+    G PG PG+ G+PG NG  G PG 
Sbjct: 456 SGRPGQPGETGLPGIPGKDGSPGEKGNPGAPGI---SGPPGFPGVRGLPGVNGSPGQPGA 512

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G+PG  G +G KG TG  G R   G+ GVPG+
Sbjct: 513 KGNTGSPGVPGYKGESGAKGETGAPGPR---GLPGVPGS 548



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 84/179 (46%), Gaps = 30/179 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------GPQGIPGDEGKRGP 162
           PG  G  G+KG  GA G  G  G  G +G PGV G P         G  G+PG +G+ G 
Sbjct: 471 PGKDGSPGEKGNPGAPGISGPPGFPGVRGLPGVNGSPGQPGAKGNTGSPGVPGYKGESGA 530

Query: 163 KGDMGYPGPQ---GIPGDEGKRG------------------PKGDMGYPGRIGLDGRDGL 201
           KG+ G PGP+   G+PG EGKRG                    G  G PG  G  G  G 
Sbjct: 531 KGETGAPGPRGLPGVPGSEGKRGKRGMRGPPGPGGPPGERGMPGARGLPGPDGAVGPKGQ 590

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G  G PG  G  G PG+ G  G  G+ G  G  G +G +GP G RG  G +G PG
Sbjct: 591 TGDRGSAGPPGPKGSLGEPGRPGAVGPQGLRGLTGRPGPQGRSGPPGERGMPGADGKPG 649



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 82/170 (48%), Gaps = 24/170 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GLQGP G+ G  G  GE G+ G         E+G  GAPG+ GPPG    PG  G  G  
Sbjct: 448 GLQGPRGESGRPGQPGETGLPGIPGKDGSPGEKGNPGAPGISGPPG---FPGVRGLPGVN 504

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG +G  G  G  G KG+ G  G  G  G  GLPG PG +G  G+ GM G PG  
Sbjct: 505 GSPGQPGAKGNTGSPGVPGYKGESGAKGETGAPGPRGLPGVPGSEGKRGKRGMRGPPGPG 564

Query: 224 ------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                       GLPG DG  G  G  G++G  GP G +G  G  G PG 
Sbjct: 565 GPPGERGMPGARGLPGPDGAVGPKGQTGDRGSAGPPGPKGSLGEPGRPGA 614



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/127 (46%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
            G  G +G RGE G  G  GPPG +G PG  G  G KGD G PGP G          KG  
Sbjct: 1146 GLTGERGPRGETGPQGAEGPPGERGKPGVPGLEGKKGDRGEPGPAGS---------KGHR 1196

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G  G  GL G  G PGE G  G PG  G DG  G  G PG+DG PG  G     G+ GPR
Sbjct: 1197 GLIGLQGLPGSPGFPGEKGSPGNPGPPGKDGEAGSRGPPGRDGSPGPQGV---PGLVGPR 1253

Query: 248  GNRGKSG 254
            G  G  G
Sbjct: 1254 GGNGNDG 1260



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 53/103 (51%), Gaps = 3/103 (2%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           GAPG  G  GP G PG +G  GP+G +G P   G+ GD G  G KG  G PG +G  G  
Sbjct: 879 GAPGAPGERGPVGSPGLQGFPGPQGLVGLP---GLKGDRGIPGLKGMQGNPGHVGKPGEQ 935

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           G PG  GL G  G  G  G  G  GL G  G PG +G  G  G
Sbjct: 936 GPPGPIGLTGAKGARGEAGTRGDAGLMGPPGRPGDSGPPGHPG 978



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 67/161 (41%), Gaps = 54/161 (33%)

Query: 152 GIPGDEGKRGP---------------------------------KGDMGYPGPQGIPGDE 178
           G+PG++G+ G                                  KG+ G PG +GIPG+ 
Sbjct: 316 GVPGEDGEAGQPGASGPPGPRGLPGMPGLPGVKGHRGFPGLDGIKGEQGPPGEKGIPGNP 375

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---------- 228
           G  GP G +G  G  G  GR+G  G PGL       GMDGI G  GLPG+          
Sbjct: 376 GPVGPSGPVGPSGPRGERGREGPQGSPGL------RGMDGIAGPPGLPGEMGKPGPPGFP 429

Query: 229 -----DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                 G  G+ G  G +G+ GPRG  G+ G  G  G P I
Sbjct: 430 GIPGAKGDHGSPGPKGSQGLQGPRGESGRPGQPGETGLPGI 470



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 50/100 (50%), Gaps = 12/100 (12%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGKRGPKGDMGYPGPQGIP 175
           G  G  GERG  G+PG+ G PGPQG            IPG +G +G  G +G PG QG P
Sbjct: 879 GAPGAPGERGPVGSPGLQGFPGPQGLVGLPGLKGDRGIPGLKGMQGNPGHVGKPGEQGPP 938

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           G  G  G KG  G  G  G  G  G PG PG  G PG  G
Sbjct: 939 GPIGLTGAKGARGEAGTRGDAGLMGPPGRPGDSGPPGHPG 978



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 50/95 (52%), Gaps = 12/95 (12%)

Query: 112 PGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGLQG   P G  G  G KG+ G+ G +G +G PG VG PG Q         GP G +G 
Sbjct: 893 PGLQGFPGPQGLVGLPGLKGDRGIPGLKGMQGNPGHVGKPGEQ---------GPPGPIGL 943

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            G +G  G+ G RG  G MG PGR G  G  G PG
Sbjct: 944 TGAKGARGEAGTRGDAGLMGPPGRPGDSGPPGHPG 978



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 77/189 (40%), Gaps = 57/189 (30%)

Query: 126  AKGEMGVKGERGEKGAPGVV------------------GPPGPQGIPGDEGKRGPK---- 163
            A GE+G  G+ G +GA G                    GP G  G+PG  G+ G K    
Sbjct: 1063 APGEVGTPGKPGSEGAQGPPGLTGPPGPPGPTGEQGPEGPSGKPGMPGVAGRTGDKGPVG 1122

Query: 164  -----------------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                                   G  G  GP+G  G +G  GP G+ G PG  GL+G+ G
Sbjct: 1123 PVGPPGPSGPPGLPGPPGPLGPIGLTGERGPRGETGPQGAEGPPGERGKPGVPGLEGKKG 1182

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---------NGEKGMTGPRGNRG 251
              GEPG  G  G  G+ G+    GLPG  G PG  G+         +GE G  GP G  G
Sbjct: 1183 DRGEPGPAGSKGHRGLIGL---QGLPGSPGFPGEKGSPGNPGPPGKDGEAGSRGPPGRDG 1239

Query: 252  KSGINGVPG 260
              G  GVPG
Sbjct: 1240 SPGPQGVPG 1248



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            +QGF        P GL G  G KG+ G  G  G++G  G  G PG  GPPGP G+ G +
Sbjct: 894 GLQGFPG------PQGLVGLPGLKGDRGIPGLKGMQGNPGHVGKPGEQGPPGPIGLTGAK 947

Query: 158 GKRGP---KGDMGYPGPQGIPGDEGKRG 182
           G RG    +GD G  GP G PGD G  G
Sbjct: 948 GARGEAGTRGDAGLMGPPGRPGDSGPPG 975


>gi|410926031|ref|XP_003976482.1| PREDICTED: collagen alpha-2(XI) chain-like [Takifugu rubripes]
          Length = 1780

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 89/167 (53%), Gaps = 15/167 (8%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G   +     P G QGPIG  G  G KG  G++G +G KG  G  G PG   I GD G 
Sbjct: 701 EGPSGTKGNQGPSGPQGPIGYPGPRGLKGGQGIRGLKGHKGEKGEDGFPG---IKGDFGI 757

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRN-- 214
           +G +G++G PGP+G   ++G  GPKG  G PG    +G  G  G  G PGL G PGR   
Sbjct: 758 KGERGEIGVPGPRG---EDGPEGPKGRFGPPGETGPLGAVGEKGKLGVPGLPGYPGRQGP 814

Query: 215 ----GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
               G  G PG +G  G  G+ G +G  G++G TGPRG RG  G  G
Sbjct: 815 KGSLGFPGFPGSNGEKGTRGLTGKSGPRGQRGPTGPRGQRGPRGATG 861



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 78/151 (51%), Gaps = 6/151 (3%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGYPGPQ--- 172
           G +G  G +G  G  GE+G  G PG+ G PG  G PG  GK GP   KG+ G  GPQ   
Sbjct: 660 GTQGMPGPQGHTGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTKGNQGPSGPQGPI 719

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG  G +G +G  G  G  G  G DG PG  G  GI G  G  G+PG  G  G +G  
Sbjct: 720 GYPGPRGLKGGQGIRGLKGHKGEKGEDGFPGIKGDFGIKGERGEIGVPGPRGEDGPEGPK 779

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  GE G  G  G +GK G+ G+PG P 
Sbjct: 780 GRFGPPGETGPLGAVGEKGKLGVPGLPGYPG 810



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 90/194 (46%), Gaps = 45/194 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+G  G  G KGE G  G +G +G+ G++GPPG             +G+PG+ G  
Sbjct: 501 GRPGPLGNPGSPGLKGESGDPGPQGPRGSLGLMGPPGKSGRRGRAGADGARGMPGESGS- 559

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI- 219
             KGD G+ G  G+PGD+G RG  G MG PG  G DG  G  G+ G  G+PG  G  G+ 
Sbjct: 560 --KGDRGFDGLPGLPGDKGHRGDSGPMGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLL 617

Query: 220 --------------PGKDGLPGKDG---------------IPGTNGTNGEKGMTGPRGNR 250
                          G DG  G  G                PGT G  G +G TGP G +
Sbjct: 618 GPKGPPGIPGPPGVRGSDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGHTGPPGEK 677

Query: 251 GKSGINGVPGTPAI 264
           G +G  G+PG P  
Sbjct: 678 GPTGKPGLPGMPGA 691



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 87/193 (45%), Gaps = 51/193 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G+ G  G KG+ G  G  G+ G++G +G  G +GPPG QG  G   D+G  GP+G  G P
Sbjct: 552 GMPGESGSKGDRGFDGLPGLPGDKGHRGDSGPMGPPGSQGEDGERGDDGDVGPRGLPGEP 611

Query: 170 GPQGI------------------------------------------PGDEGKRGPKGDM 187
           GP+G+                                          PG +G  GP+G  
Sbjct: 612 GPRGLLGPKGPPGIPGPPGVRGSDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGHT 671

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G PG  G  G+ GLPG PG DG PG       PGK+G  G  G  G +G  G  G  GPR
Sbjct: 672 GPPGEKGPTGKPGLPGMPGADGPPGH------PGKEGPSGTKGNQGPSGPQGPIGYPGPR 725

Query: 248 GNRGKSGINGVPG 260
           G +G  GI G+ G
Sbjct: 726 GLKGGQGIRGLKG 738



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 96/214 (44%), Gaps = 45/214 (21%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   S     PPG  G  G+ G  GA+G  G  G +G++G  G+ G PG +G  GD G 
Sbjct: 524 QGPRGSLGLMGPPGKSGRRGRAGADGARGMPGESGSKGDRGFDGLPGLPGDKGHRGDSGP 583

Query: 160 RGP---------KGDMGYPGPQGIPGDEGKR------------------------GPKGD 186
            GP         +GD G  GP+G+PG+ G R                        GPKG+
Sbjct: 584 MGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIPGPPGVRGSDGPHGPKGN 643

Query: 187 MGY------------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           +G             PG  G+ G  G  G PG  G  G+ G+ G+PG DG PG  G  G 
Sbjct: 644 LGPQGEPGPPGQQGTPGTQGMPGPQGHTGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGP 703

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           +GT G +G +GP+G  G  G  G+ G   I   K
Sbjct: 704 SGTKGNQGPSGPQGPIGYPGPRGLKGGQGIRGLK 737



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/128 (44%), Positives = 66/128 (51%), Gaps = 6/128 (4%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +G  G  G  G PGP G PG  G +G  GD   PGPQG  G  G  GP G  G  GR G 
Sbjct: 491 KGPPGPMGFTGRPGPLGNPGSPGLKGESGD---PGPQGPRGSLGLMGPPGKSGRRGRAGA 547

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           DG  G+PGE G  G  G +G+ G+PG  G  G  G  G  G+ GE G    RG+ G  G 
Sbjct: 548 DGARGMPGESGSKGDRGFDGLPGLPGDKGHRGDSGPMGPPGSQGEDGE---RGDDGDVGP 604

Query: 256 NGVPGTPA 263
            G+PG P 
Sbjct: 605 RGLPGEPG 612



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 66/126 (52%), Gaps = 18/126 (14%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            +GP G +G  G +GE G KG+ G  G PG  GP GPQG+PG  G  G +G  G  G QG 
Sbjct: 1325 RGPAGTRGPEGRQGEKGTKGDPGAVGPPGKTGPVGPQGVPGKPGTEGLRGLPGSVGEQGS 1384

Query: 175  PGDEGKR------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            PG  G++                  G KG+ G+PG IGL G  G  GE G  G+PG +G 
Sbjct: 1385 PGPAGQKGPPGPIGPPGLPGLRGDSGGKGEKGHPGLIGLIGPPGEQGEKGDRGMPGPHGS 1444

Query: 217  DGIPGK 222
            +G  G+
Sbjct: 1445 NGPKGE 1450



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 95/239 (39%), Gaps = 54/239 (22%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------- 140
           L   +G    +    PPG QG  G++G+ G  G  G+ GE G +G               
Sbjct: 571 LPGDKGHRGDSGPMGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIPGPPG 630

Query: 141 ---APGVVGP------------------PGPQGIPGDEGKRGPKGDM---------GYPG 170
              + G  GP                  PG QG+PG +G  GP G+          G PG
Sbjct: 631 VRGSDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGHTGPPGEKGPTGKPGLPGMPG 690

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPG 227
             G PG  GK GP G  G  G  G  G  G PG  GL    GI G  G  G  G+DG PG
Sbjct: 691 ADGPPGHPGKEGPSGTKGNQGPSGPQGPIGYPGPRGLKGGQGIRGLKGHKGEKGEDGFPG 750

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
             G  G  G  GE G+ GPRG  G  G  G  G P       E+  L    E  +L +P
Sbjct: 751 IKGDFGIKGERGEIGVPGPRGEDGPEGPKGRFGPPG------ETGPLGAVGEKGKLGVP 803



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 85/213 (39%), Gaps = 67/213 (31%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGI--------------------------PGDEGKR 160
           +G  GV+G++GEKG P V+ P    G+                           GD G+R
Sbjct: 378 EGGAGVRGQKGEKGEPAVLEP----GMLIEGPPGPEGPAGLPGPSGPSGPPGSVGDPGER 433

Query: 161 GPKGDMGYPGPQGIPGDEGK-------------------------------------RGP 183
           GP G  G PG  G+PG  G                                      +GP
Sbjct: 434 GPPGKAGLPGADGVPGPPGTSVMLPFRFGQSGGDKGPAVSAQEAQAAAILSQARMALKGP 493

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G MG+ GR G  G  G PG  G  G PG  G  G  G  G PGK G  G  G +G +GM
Sbjct: 494 PGPMGFTGRPGPLGNPGSPGLKGESGDPGPQGPRGSLGLMGPPGKSGRRGRAGADGARGM 553

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G  G++G  G +G+PG P    ++ +S  + P
Sbjct: 554 PGESGSKGDRGFDGLPGLPGDKGHRGDSGPMGP 586



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 83/188 (44%), Gaps = 45/188 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGI------------ 153
           PGL G  G +G+ G  G  G +GE GE+G  G VGP      PGP+G+            
Sbjct: 569 PGLPGDKGHRGDSGPMGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIPGP 628

Query: 154 ---PGDEGKRGPKGDM------------------GYPGPQG---IPGDEGKRGPKGDMGY 189
               G +G  GPKG++                  G PGPQG    PG+   +GP G  G 
Sbjct: 629 PGVRGSDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGHTGPPGE---KGPTGKPGL 685

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG  G DG  G PG+ G  G  G  G  G  G  G PG  G+ G  G  G KG  G +G 
Sbjct: 686 PGMPGADGPPGHPGKEGPSGTKGNQGPSGPQGPIGYPGPRGLKGGQGIRGLKGHKGEKGE 745

Query: 250 RGKSGING 257
            G  GI G
Sbjct: 746 DGFPGIKG 753



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 61/118 (51%), Gaps = 18/118 (15%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           + GPPGP G     G+ GP G+ G PG +G  GD G +GP+G +G  G  G  GR G  G
Sbjct: 490 LKGPPGPMGF---TGRPGPLGNPGSPGLKGESGDPGPQGPRGSLGLMGPPGKSGRRGRAG 546

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G+PG +G  G  G DGLPG               + G +G+RG SG  G PG+
Sbjct: 547 ADGARGMPGESGSKGDRGFDGLPG---------------LPGDKGHRGDSGPMGPPGS 589



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 74/160 (46%), Gaps = 33/160 (20%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPP---------GPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GAKGE G  GE GE G+PG  G           GP G  G EG++G KG  G PG  G P
Sbjct: 1293 GAKGERGEDGEAGESGSPGPPGENGPPGPLGKRGPAGTRGPEGRQGEKGTKGDPGAVGPP 1352

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM------------------D 217
            G   K GP G  G PG+ G +G  GLPG  G  G PG  G                    
Sbjct: 1353 G---KTGPVGPQGVPGKPGTEGLRGLPGSVGEQGSPGPAGQKGPPGPIGPPGLPGLRGDS 1409

Query: 218  GIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSG 254
            G  G+ G PG  G+   PG  G  G++GM GP G+ G  G
Sbjct: 1410 GGKGEKGHPGLIGLIGPPGEQGEKGDRGMPGPHGSNGPKG 1449



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 83/206 (40%), Gaps = 72/206 (34%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDE----------------------------- 157
            KG  G +GE+GE G PG  G  G +G+PGD+                             
Sbjct: 1235 KGPRGERGEKGEAGQPGTAGSTGGRGLPGDDGPKGNPGPVGFPGDPGPPGEVGPRGQDGA 1294

Query: 158  -GKRGPKGDMGYP------------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
             G+RG  G+ G                    GP G  G EG++G KG  G PG +G  G+
Sbjct: 1295 KGERGEDGEAGESGSPGPPGENGPPGPLGKRGPAGTRGPEGRQGEKGTKGDPGAVGPPGK 1354

Query: 199  DGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDGIP---------------GTNGTNGE 240
             G  G  G+ G PG  G+ G+P   G+ G PG  G                 G +G  GE
Sbjct: 1355 TGPVGPQGVPGKPGTEGLRGLPGSVGEQGSPGPAGQKGPPGPIGPPGLPGLRGDSGGKGE 1414

Query: 241  K------GMTGPRGNRGKSGINGVPG 260
            K      G+ GP G +G+ G  G+PG
Sbjct: 1415 KGHPGLIGLIGPPGEQGEKGDRGMPG 1440



 Score = 39.7 bits (91), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 15/102 (14%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEG 158
            PPG  GP+G +   G  G+ G +G RG  G+ G  G PGP G            +PG  G
Sbjct: 1351 PPGKTGPVGPQ---GVPGKPGTEGLRGLPGSVGEQGSPGPAGQKGPPGPIGPPGLPGLRG 1407

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
              G KG+ G+PG  G+ G  G++G KGD G PG  G +G  G
Sbjct: 1408 DSGGKGEKGHPGLIGLIGPPGEQGEKGDRGMPGPHGSNGPKG 1449



 Score = 39.3 bits (90), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG +G  G  G  GE+G +G  G  GP G +G  G  G+RGP+G  G  GP
Sbjct: 809 PGRQGP---KGSLGFPGFPGSNGEKGTRGLTGKSGPRGQRGPTGPRGQRGPRGATGKLGP 865

Query: 172 QGI 174
           +G 
Sbjct: 866 KGT 868


>gi|130502097|ref|NP_001076370.1| collagen alpha-2(VIII) chain precursor [Danio rerio]
          Length = 686

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/152 (47%), Positives = 89/152 (58%), Gaps = 12/152 (7%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           +GQKG+ G  G  GV G++GE   PG+ G PG  G  G  G  GP+G MG PG  G+PG 
Sbjct: 303 VGQKGDRGPTGLQGVPGDKGE---PGLEGLPGDLGPTGQSGLPGPQGLMGLPGKPGMPGL 359

Query: 178 EGKRGPKGDMGYPG------RIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGK 228
           +G+ GP+G  G PG        GL G+ GLPG+   PGL+G  G+ G  G PG  GLPG 
Sbjct: 360 KGENGPQGPSGLPGLRGDQGPSGLAGKPGLPGDKGLPGLNGATGKPGPKGEPGHIGLPGN 419

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G  G  GE G +G  G RG SGI G+PG
Sbjct: 420 PGLIGAPGPKGENGFSGTPGPRGNSGIPGLPG 451



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 81/150 (54%), Gaps = 6/150 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP GQ G  G +G MG+ G+ G  G  G  GP GP G+PG  G +GP G  G PG 
Sbjct: 330 PGDLGPTGQSGLPGPQGLMGLPGKPGMPGLKGENGPQGPSGLPGLRGDQGPSGLAGKPG- 388

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLPGK 228
             +PGD+G  G  G  G PG  G  G  GLPG PGL G P   G NG  G PG  G  G 
Sbjct: 389 --LPGDKGLPGLNGATGKPGPKGEPGHIGLPGNPGLIGAPGPKGENGFSGTPGPRGNSGI 446

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G+PG  G  G +G+ G +G +G  G  G+
Sbjct: 447 PGLPGPTGHMGPQGIPGLKGEQGPPGPQGI 476



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 90/200 (45%), Gaps = 46/200 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVK-----------------GERGEKGAPGVVGPPGPQG--- 152
           GL GP+G KG+ GA G+ G                   G+ G  G PG +GP GP+G   
Sbjct: 225 GLPGPLGPKGDKGAPGDQGPSGQVGPPGQQGPPGAPGLGKPGLDGIPGNLGPIGPKGEAG 284

Query: 153 -----------------IPGDEGKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMGYPGR 192
                            + G +G RGP G  G PG +G PG EG     GP G  G PG 
Sbjct: 285 PRGTPGFPGPPGYGKPGLVGQKGDRGPTGLQGVPGDKGEPGLEGLPGDLGPTGQSGLPGP 344

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPG------KDGLPGKDGIPGTNGTNGEKGMTGP 246
            GL G  G PG PGL G  G  G  G+PG        GL GK G+PG  G  G  G TG 
Sbjct: 345 QGLMGLPGKPGMPGLKGENGPQGPSGLPGLRGDQGPSGLAGKPGLPGDKGLPGLNGATGK 404

Query: 247 RGNRGKSGINGVPGTPAICA 266
            G +G+ G  G+PG P +  
Sbjct: 405 PGPKGEPGHIGLPGNPGLIG 424



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 85/159 (53%), Gaps = 35/159 (22%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G+ G +G  G+ G  G+ G PG+ G  GP+G+PG  G+ GP+G+   PGP+G+ G  
Sbjct: 88  GLNGQTGPQGPSGLPG-IGKPGLPGLPGKIGPKGLPGLNGEVGPRGE---PGPRGLQGQP 143

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  GP G       I L+G+ GLPG    PG  G PG  G  G+PG+ GL G++G     
Sbjct: 144 GAPGPVG-------ISLNGKPGLPGTRGPPGSRGEPGSKGARGVPGEPGLKGENG----- 191

Query: 236 GTNGEKGMTGPRGNRG--------------KSGINGVPG 260
             NG  G+TGPRG  G              K GING+PG
Sbjct: 192 --NGHTGLTGPRGPTGLQGPPGAPGVPGLGKPGINGLPG 228



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 101/268 (37%), Gaps = 108/268 (40%)

Query: 112 PGLQGPIGQKG------EIGAKGEMGVKGERGEKGAPGVVG--------------PPGPQ 151
           PGL G IG KG      E+G +GE G +G +G+ GAPG VG              PPG +
Sbjct: 110 PGLPGKIGPKGLPGLNGEVGPRGEPGPRGLQGQPGAPGPVGISLNGKPGLPGTRGPPGSR 169

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM--------------------GYPG 191
           G PG +G RG  G+ G  G  G  G  G  GP+G                      G PG
Sbjct: 170 GEPGSKGARGVPGEPGLKGENGN-GHTGLTGPRGPTGLQGPPGAPGVPGLGKPGINGLPG 228

Query: 192 RIGLDGRDGLPGE-----------------------PGLDGIPGR--------------- 213
            +G  G  G PG+                       PGLDGIPG                
Sbjct: 229 PLGPKGDKGAPGDQGPSGQVGPPGQQGPPGAPGLGKPGLDGIPGNLGPIGPKGEAGPRGT 288

Query: 214 -----------------------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                                   G+ G+PG  G PG +G+PG  G  G+ G+ GP+   
Sbjct: 289 PGFPGPPGYGKPGLVGQKGDRGPTGLQGVPGDKGEPGLEGLPGDLGPTGQSGLPGPQ--- 345

Query: 251 GKSGINGVPGTPAICAYKRESCSLLPNS 278
              G+ G+PG P +   K E+    P+ 
Sbjct: 346 ---GLMGLPGKPGMPGLKGENGPQGPSG 370



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 64/133 (48%), Gaps = 7/133 (5%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            M G         P GL G  G +G  G  G+ G+ G++G  G  G  G PGP+G PG  
Sbjct: 355 GMPGLKGENGPQGPSGLPGLRGDQGPSGLAGKPGLPGDKGLPGLNGATGKPGPKGEPGHI 414

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G  G +G PGP+G  G  G  GP+G+ G PG  G  G        G  GIPG  G  
Sbjct: 415 GLPGNPGLIGAPGPKGENGFSGTPGPRGNSGIPGLPGPTGHM------GPQGIPGLKGEQ 468

Query: 218 GIPGKDGLPGKDG 230
           G PG  G+ GK G
Sbjct: 469 GPPGPQGI-GKPG 480



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 40/68 (58%), Gaps = 8/68 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G KGE G  G  G +G  G  G PG  G  GPQGIPG +G++GP      PGP
Sbjct: 420 PGLIGAPGPKGENGFSGTPGPRGNSGIPGLPGPTGHMGPQGIPGLKGEQGP------PGP 473

Query: 172 QGI--PGD 177
           QGI  PGD
Sbjct: 474 QGIGKPGD 481


>gi|395821645|ref|XP_003784148.1| PREDICTED: collagen alpha-1(XI) chain isoform 3 [Otolemur
           garnettii]
          Length = 1772

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 82/145 (56%), Gaps = 9/145 (6%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G  G +G  G+ G+ GP+G+ G  GP+G     
Sbjct: 729 GVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKG----- 783

Query: 179 GKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            + GP GD+G PG+ G  G+    GLPG PG  G  G  G  G PG +G  G  G+ G  
Sbjct: 784 -RAGPTGDLGPPGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKP 842

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G++G TGPRG+RG  G  G PG
Sbjct: 843 GPRGQRGPTGPRGSRGARGPTGKPG 867



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 58/119 (48%), Gaps = 24/119 (20%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDE 178
            G  G +GE G KGE G +G  G  GP GPQG     GK GP+G  G PGP   QG+PG  
Sbjct: 1335 GAEGRQGEKGAKGEAGAEGPSGKTGPVGPQGP---AGKPGPEGLRGIPGPVGEQGLPGAA 1391

Query: 179  GKR------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G+                   G KG+ G+PG IGL G  G  GE G  G+PG  G  G 
Sbjct: 1392 GQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGA 1450



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           + ++G      +  P G  GP G KG  G  G++G  G+ GEKG  GV       G+PG 
Sbjct: 758 MGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDLGPPGQAGEKGKLGVP------GLPGY 811

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            G++GPKG  G+P   G PG  G++G +G  G PG  G  G  G  G  G  G  G+ G
Sbjct: 812 PGRQGPKGSTGFP---GFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPG 867



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 68/127 (53%), Gaps = 9/127 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G+ G +G  GV+G  G  G PG  G PG  G  G  G+ G KGD G+ G  G+PGD+
Sbjct: 519 GESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPGLPGDK 578

Query: 179 GKRGPK---------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G RG +         GD G  G  G  G  GLPGE G  G+ G  G  GIPG+ G+ G D
Sbjct: 579 GHRGERGPQGPPGAPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGIPGQPGMAGVD 638

Query: 230 GIPGTNG 236
           G PG  G
Sbjct: 639 GPPGPKG 645



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 60/122 (49%), Gaps = 33/122 (27%)

Query: 112 PGLQGPIG------------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           PG QGP G            ++G  GA G  G+ GE G KG  G  G PG   +PGD+G 
Sbjct: 524 PGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPG---LPGDKGH 580

Query: 160 RGPK---------------GDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGL 201
           RG +               G+ G  GP+G+PG+ G R   GP+G  G PG+ G+ G DG 
Sbjct: 581 RGERGPQGPPGAPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGIPGQPGMAGVDGP 640

Query: 202 PG 203
           PG
Sbjct: 641 PG 642



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 60/122 (49%), Gaps = 21/122 (17%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------LDGIPGRNGM 216
           KG+ G PGPQG  G +G  GP G  G  GR G DG  G+PGEPG       DG+PG  G 
Sbjct: 518 KGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPGLPGD 577

Query: 217 DGIPGK------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+            DG+ G+DG  G  G  GE    GPRG  G  G  G+PG P +
Sbjct: 578 KGHRGERGPQGPPGAPGDDGMRGEDGEIGPRGLPGE---AGPRGLLGPRGTPGIPGQPGM 634

Query: 265 CA 266
             
Sbjct: 635 AG 636



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 82/214 (38%), Gaps = 69/214 (32%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---------- 168
           G+ GEIG +G  G  G RG  G  G  G PG  G+ G +G  GPKG+MG           
Sbjct: 600 GEDGEIGPRGLPGEAGPRGLLGPRGTPGIPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQ 659

Query: 169 --PGPQ------------------------------GIPGDEGKRGPKGD---------- 186
             PGPQ                              G PG  GK G  G+          
Sbjct: 660 GNPGPQGLPGPQGPIGPPGEKGPQGKPGLGGLPGADGPPGHPGKEGQSGEKGALGPPGPQ 719

Query: 187 --------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                    G  G  G+ G  G  GE G DG PG  G  G+ G  G  G+ G  G +G  
Sbjct: 720 GPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPE 779

Query: 239 GEKGMTGPRGN---------RGKSGINGVPGTPA 263
           G KG  GP G+         +GK G+ G+PG P 
Sbjct: 780 GPKGRAGPTGDLGPPGQAGEKGKLGVPGLPGYPG 813



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 21/102 (20%)

Query: 138  EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            EKGAPG  GP GP G      + G +G +G PGP G  G  G+ G KG++G PG+ G  G
Sbjct: 1054 EKGAPGEKGPQGPAG------RDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKG 1107

Query: 198  RDG---------------LPGEPGLDGIPGRNGMDGIPGKDG 224
              G                PG  G DG PG  G  G+ G+ G
Sbjct: 1108 DKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1149



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 60/145 (41%), Gaps = 45/145 (31%)

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------- 179
            G  G  G PGPQGI    GK GP G  G+PG +G+PG +G                    
Sbjct: 969  GKEGAKGDPGPQGI---SGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP 1025

Query: 180  -KRGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
             +RG  G                     + G PG  G  G  G  G  G  G+PG  G  
Sbjct: 1026 GERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPA 1085

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG+DG  G+ G PG  G+ G+KG
Sbjct: 1086 GSPGEDGDKGEIGEPGQKGSKGDKG 1110



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 77/184 (41%), Gaps = 51/184 (27%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------------ 163
            G+ GAKG+ G +G  G+ G  G+ G PG +G+PG +G  G K                  
Sbjct: 969  GKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGER 1028

Query: 164  GDMGYPGP------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  G  GP                  +G PG++G +GP G  G  G +GL G  G  G P
Sbjct: 1029 GSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSP 1088

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKD------------GIPGTNGTNGEKGMTGPRGNRGKS 253
            G DG  G  G  G  G  G  G++            G PG  G +GE    GPRG +G  
Sbjct: 1089 GEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGE---PGPRGQQGMF 1145

Query: 254  GING 257
            G  G
Sbjct: 1146 GQKG 1149



 Score = 42.7 bits (99), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 90/239 (37%), Gaps = 90/239 (37%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---------KGERGEK------------GAPGVVGPPGP 150
           PG  G  G  GE G+KG+ G          KG RGE+            G  G  G  GP
Sbjct: 548 PGADGGRGMPGEPGSKGDRGFDGLPGLPGDKGHRGERGPQGPPGAPGDDGMRGEDGEIGP 607

Query: 151 QGIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGY------------PG---- 191
           +G+PG+ G RG   P+G  G PG  G+ G +G  GPKG+MG             PG    
Sbjct: 608 RGLPGEAGPRGLLGPRGTPGIPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGL 667

Query: 192 --------------------RIGLDGRDGLPGEPGLDG---------------------- 209
                                 GL G DG PG PG +G                      
Sbjct: 668 PGPQGPIGPPGEKGPQGKPGLGGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGP 727

Query: 210 --IPGRNGMDGIPGKDGLPGKDGIP------GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             + G +G+ G+ G  G  G+DG P      G  G  GE G  GPRG  G  G  G  G
Sbjct: 728 RGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAG 786



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 73/170 (42%), Gaps = 45/170 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERG------------EKGAPGVVGP----------- 147
            P GL+G  G++G  GA+G  G+KG  G            E+G+ G  GP           
Sbjct: 988  PAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG 1047

Query: 148  ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                 G +G PG++G +GP G  G  GP G+P      GP G  G PG  G  G  G PG
Sbjct: 1048 PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP------GPAGPAGSPGEDGDKGEIGEPG 1101

Query: 204  EPGLDGIPGRNGMD------------GIPGKDGLPGKDGIPGTNGTNGEK 241
            + G  G  G NG              GI G DG PG  G  G  G  G++
Sbjct: 1102 QKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDE 1151



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 52/111 (46%), Gaps = 15/111 (13%)

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G  G QG  G +G+ G +G  G  G +G  G  G PG  GL GIPG  G  G+PG  G 
Sbjct: 1334 AGAEGRQGEKGAKGEAGAEGPSGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQ 1393

Query: 226  PGKDGI------------PGTNGTNGEK---GMTGPRGNRGKSGINGVPGT 261
             G  G             PG+ G  G     G+ GP G +G+ G  G+PGT
Sbjct: 1394 DGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGT 1444


>gi|170029346|ref|XP_001842554.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167881657|gb|EDS45040.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1452

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 89/189 (47%), Gaps = 39/189 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK--------- 163
           G QGP G +G  G +GE G  G+ GE   PG+ GPPG  G  G++G  G           
Sbjct: 455 GAQGPKGSQGPQGPRGESGRPGQPGE---PGLNGPPGKDGAAGEKGSSGSPGLAGPPGFP 511

Query: 164 ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                       GD+G  G  G+PGD   RG KG+ G  G  G  G  GLPG  G +G  
Sbjct: 512 GPRGAPGLNGSPGDVGSKGEPGLPGD---RGYKGESGIKGESGTPGPRGLPGAAGPEGKR 568

Query: 212 GRNGMDG------------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G+ GM G            +PG  GLPG DG  G  G  G++G  GP+G +G +G  G P
Sbjct: 569 GKRGMKGPTGLAGPQGERGLPGIPGLPGPDGAQGIKGQRGDRGAPGPQGTKGSTGDPGSP 628

Query: 260 GTPAICAYK 268
           G P I   +
Sbjct: 629 GQPGIQGLR 637



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 77/145 (53%), Gaps = 15/145 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G  G++G+KGE G+ G+RG KG  G+    G PGP+G+PG  G  G +G  G  GP G+ 
Sbjct: 521 GSPGDVGSKGEPGLPGDRGYKGESGIKGESGTPGPRGLPGAAGPEGKRGKRGMKGPTGLA 580

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G +G+RG            L G  GLPG  G  GI G+ G  G PG  G  G  G PG+ 
Sbjct: 581 GPQGERG------------LPGIPGLPGPDGAQGIKGQRGDRGAPGPQGTKGSTGDPGSP 628

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G +G+ GP G  G  G  G PG
Sbjct: 629 GQPGIQGLRGPAGRSGAQGKAGAPG 653



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 71/135 (52%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G KGE G KGE G  G RG  GA G  G  G +G+ G  G  GP+G+ G PG 
Sbjct: 532 PGLPGDRGYKGESGIKGESGTPGPRGLPGAAGPEGKRGKRGMKGPTGLAGPQGERGLPGI 591

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G+PG +G +G KG  G  G  G  G  G  G+PG  G PG  G+ G  G+ G  GK G 
Sbjct: 592 PGLPGPDGAQGIKGQRGDRGAPGPQGTKGSTGDPGSPGQPGIQGLRGPAGRSGAQGKAGA 651

Query: 232 PGTNGTNGEKGMTGP 246
           PG  G  G  G   P
Sbjct: 652 PGERGPPGADGKENP 666



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 92/200 (46%), Gaps = 63/200 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
           PGL GP   KGE G  GE G  G  G  GAPG VGP GP+G  G EG  GP         
Sbjct: 370 PGLDGP---KGEQGNSGEKGSVGSIGPIGAPGPVGPAGPRGERGREGPPGPNGLRGIDGI 426

Query: 163 ------------------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                                   KGDMG  GP+   G +G +GP+G+ G PG+      
Sbjct: 427 AGPPGQPGPVGKAGPPGFPGTPGNKGDMGAQGPK---GSQGPQGPRGESGRPGQ------ 477

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---------------DGIPGTNGTNGEKGM 243
              PGEPGL+G PG++G  G  G  G PG                +G PG  G+ GE G+
Sbjct: 478 ---PGEPGLNGPPGKDGAAGEKGSSGSPGLAGPPGFPGPRGAPGLNGSPGDVGSKGEPGL 534

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            G RG +G+SGI G  GTP 
Sbjct: 535 PGDRGYKGESGIKGESGTPG 554



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 60/110 (54%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           E+GE G PG+ G PG  G  G+ G  GP+G  G+PGPQG  G  G +G +G MG  G  G
Sbjct: 828 EKGEPGTPGISGEPGTPGAVGERGPVGPQGLQGFPGPQGPVGASGPKGDRGQMGLKGEQG 887

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
             G  G PGEPG  G+ G  G  G  G+ GL G+ G  G  G  G+ G  
Sbjct: 888 NSGNPGTPGEPGPQGLIGLTGSKGARGEAGLRGETGSMGAPGRPGDPGAA 937



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 76/158 (48%), Gaps = 30/158 (18%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G+ GE G  G+VG PGP+G+PG  G  G KG       QG+PG +G +G +G+ G  
Sbjct: 332 GAPGDDGETGPQGIVGQPGPRGLPGLPGVPGIKGH------QGLPGLDGPKGEQGNSGEK 385

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP------------------ 232
           G +G  G  G PG  G  G  G  G +G PG +GL G DGI                   
Sbjct: 386 GSVGSIGPIGAPGPVGPAGPRGERGREGPPGPNGLRGIDGIAGPPGQPGPVGKAGPPGFP 445

Query: 233 ------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                 G  G  G KG  GP+G RG+SG  G PG P +
Sbjct: 446 GTPGNKGDMGAQGPKGSQGPQGPRGESGRPGQPGEPGL 483



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 48/82 (58%)

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            GP+G  G+ G++G KG  G  G QG+PG  G  G KGD+G  G+ G  G  G  G PG D
Sbjct: 1082 GPKGDAGEHGQKGVKGHRGLIGLQGLPGPAGNPGDKGDVGPAGQPGKPGEAGPRGPPGRD 1141

Query: 209  GIPGRNGMDGIPGKDGLPGKDG 230
            G PG  GM G+ G  G PG DG
Sbjct: 1142 GSPGPQGMLGMAGPRGPPGNDG 1163



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 53/96 (55%), Gaps = 9/96 (9%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G KG+ G  G+ GVKG RG  G  G+   PGP G PGD      KGD+G  G  G PG+ 
Sbjct: 1082 GPKGDAGEHGQKGVKGHRGLIGLQGL---PGPAGNPGD------KGDVGPAGQPGKPGEA 1132

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G RGP G  G PG  G+ G  G  G PG DG  G++
Sbjct: 1133 GPRGPPGRDGSPGPQGMLGMAGPRGPPGNDGKHGQS 1168



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 51/100 (51%), Gaps = 3/100 (3%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           K G  GD G  GPQGI    G+ GP+G  G PG  G+ G  GLPG  G  G  G +G  G
Sbjct: 330 KDGAPGDDGETGPQGI---VGQPGPRGLPGLPGVPGIKGHQGLPGLDGPKGEQGNSGEKG 386

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G  G  G  G  G  G  GE+G  GP G  G  GI+G+
Sbjct: 387 SVGSIGPIGAPGPVGPAGPRGERGREGPPGPNGLRGIDGI 426



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 18/75 (24%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI-- 153
            L+ +QG          PG  G  G KG++G  G+ G  GE G +G PG  G PGPQG+  
Sbjct: 1101 LIGLQGL---------PGPAGNPGDKGDVGPAGQPGKPGEAGPRGPPGRDGSPGPQGMLG 1151

Query: 154  -------PGDEGKRG 161
                   PG++GK G
Sbjct: 1152 MAGPRGPPGNDGKHG 1166



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 36/76 (47%), Gaps = 12/76 (15%)

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            GPKGD G  G+ G+ G  GL             G+ G+PG  G PG  G  G  G  G+ 
Sbjct: 1082 GPKGDAGEHGQKGVKGHRGL------------IGLQGLPGPAGNPGDKGDVGPAGQPGKP 1129

Query: 242  GMTGPRGNRGKSGING 257
            G  GPRG  G+ G  G
Sbjct: 1130 GEAGPRGPPGRDGSPG 1145


>gi|270007894|gb|EFA04342.1| hypothetical protein TcasGA2_TC014637 [Tribolium castaneum]
          Length = 1545

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 94/189 (49%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG++G  G  G  G KGE G  GE+G  G PG VGP GP G  G  G+RG +G  G PG 
Sbjct: 345 PGVKGHRGFPGLDGIKGEQGPPGEKGIPGNPGPVGPSGPVGPSGPRGERGREGPQGSPGL 404

Query: 171 --------PQGIPG------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                   P G+PG                  D G  GPKG  G  G  G  GR G PGE
Sbjct: 405 RGMDGIAGPPGLPGEMGKPGPPGFPGIPGAKGDHGSPGPKGSQGLQGPRGESGRPGQPGE 464

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            GL GIPG+   DG PG+ G PG  GI G  G  G +G+ G  G+ G+ G  G  G+P +
Sbjct: 465 TGLPGIPGK---DGSPGEKGNPGAPGISGPPGFPGVRGLPGVNGSPGQPGAKGNTGSPGV 521

Query: 265 CAYKRESCS 273
             YK ES +
Sbjct: 522 PGYKGESGA 530



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 92/183 (50%), Gaps = 15/183 (8%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQG 152
           L  ++G      E   PG  GP+G  G +G  G  G +G  G +G+PG+ G     GP G
Sbjct: 356 LDGIKGEQGPPGEKGIPGNPGPVGPSGPVGPSGPRGERGREGPQGSPGLRGMDGIAGPPG 415

Query: 153 IPGD---------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDG 200
           +PG+          G  G KGD G PGP+G  G +G RG  G  G PG  GL    G+DG
Sbjct: 416 LPGEMGKPGPPGFPGIPGAKGDHGSPGPKGSQGLQGPRGESGRPGQPGETGLPGIPGKDG 475

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGE G  G PG +G  G PG  GLPG +G PG  G  G  G  G  G +G+SG  G  G
Sbjct: 476 SPGEKGNPGAPGISGPPGFPGVRGLPGVNGSPGQPGAKGNTGSPGVPGYKGESGAKGETG 535

Query: 261 TPA 263
            P 
Sbjct: 536 APG 538



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 90/191 (47%), Gaps = 39/191 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PGL+G +G  G  G +G  G+ G +G  GAPG+VG PG +G PG +G++G +G +     
Sbjct: 777 PGLKGNVGSPGPDGVQGPPGLPGAKGHSGAPGLVGLPGLRGQPGPQGEKGERGSIGPVGP 836

Query: 167 -------GYPGPQGI---------------------------PGDEGKRGPKGDMGYPGR 192
                  G  G QG+                           PG  G+RGP G  G  G 
Sbjct: 837 EGPPGRQGERGQQGLMGPPGPPGEPAERGEPGPPGLPGESGAPGAPGERGPVGSPGLQGF 896

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G  GLPG  G  GIPG  GM G PG  G PG+ G PG  G  G KG  G  G RG 
Sbjct: 897 PGPQGLVGLPGLKGDRGIPGLKGMQGNPGHVGKPGEQGPPGPIGLTGAKGARGEAGTRGD 956

Query: 253 SGINGVPGTPA 263
           +G+ G PG P 
Sbjct: 957 AGLMGPPGRPG 967



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 70/118 (59%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GE+G PGV GP G QG+PG  G +G  G  G PG QG PG  G  GP+G+ G+PG  G  
Sbjct: 712 GERGPPGVTGPRGFQGLPGTPGNQGMPGKDGEPGLQGPPGVPGNIGPRGERGFPGERGPV 771

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G+ G+PG  G  G PG +G+ G PG  G  G  G PG  G  G +G  GP+G +G+ G
Sbjct: 772 GQPGIPGLKGNVGSPGPDGVQGPPGLPGAKGHSGAPGLVGLPGLRGQPGPQGEKGERG 829



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 105/238 (44%), Gaps = 53/238 (22%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP GQ G+ G+ G  G KG  GE G PG VGP   QG+ G  G+ GP+G  G PG
Sbjct: 581 PDGAVGPKGQTGDRGSAGPPGPKGSLGEPGRPGAVGP---QGLRGLTGRPGPQGRSGPPG 637

Query: 171 PQGIPGDEGKRG---------------PKGDMGYPGRIGLD---------------GRDG 200
            +G+PG +GK G               P GD G  G  G D               G+DG
Sbjct: 638 ERGMPGADGKPGETGPQGLQGLPGPLGPPGDKGLQGEAGKDGEPGLPGPPGPRGDNGKDG 697

Query: 201 L---------------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                            G PG+ G  G  G+ G PG  G+PGKDG PG  G  G  G  G
Sbjct: 698 AMGPQGAPGPPGVDGERGPPGVTGPRGFQGLPGTPGNQGMPGKDGEPGLQGPPGVPGNIG 757

Query: 246 PRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVV 303
           PRG RG  G  G  G P I   K    S  P+     +  PP + G++   S +P +V
Sbjct: 758 PRGERGFPGERGPVGQPGIPGLKGNVGSPGPDG----VQGPPGLPGAKG-HSGAPGLV 810



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 77/175 (44%), Gaps = 30/175 (17%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G  G KG  G++G RGE G PG  G  G  GIPG +G  G KG+ G PG  G PG  
Sbjct: 436 GDHGSPGPKGSQGLQGPRGESGRPGQPGETGLPGIPGKDGSPGEKGNPGAPGISGPPGFP 495

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG----------- 227
           G RG  G  G PG+ G  G  G PG PG  G  G  G  G PG  GLPG           
Sbjct: 496 GVRGLPGVNGSPGQPGAKGNTGSPGVPGYKGESGAKGETGAPGPRGLPGVPGSEGKRGKR 555

Query: 228 -------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                                G+PG +G  G KG TG RG+ G  G  G  G P 
Sbjct: 556 GMRGPPGPGGPPGERGMPGARGLPGPDGAVGPKGQTGDRGSAGPPGPKGSLGEPG 610



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 71/152 (46%), Gaps = 33/152 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR-------- 160
           PG+ G  GQ G  G  G  GV G +GE GA G  G PGP+   G+PG EGKR        
Sbjct: 501 PGVNGSPGQPGAKGNTGSPGVPGYKGESGAKGETGAPGPRGLPGVPGSEGKRGKRGMRGP 560

Query: 161 -------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                              GP G +G  G  G  G  G  GPKG +G PGR G  G  GL
Sbjct: 561 PGPGGPPGERGMPGARGLPGPDGAVGPKGQTGDRGSAGPPGPKGSLGEPGRPGAVGPQGL 620

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
               GL G PG  G  G PG+ G+PG DG PG
Sbjct: 621 ---RGLTGRPGPQGRSGPPGERGMPGADGKPG 649



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 83/159 (52%), Gaps = 21/159 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           PGL+G  G  G  G  GEMG  G          +G+ G+      PGP+G  G +G RG 
Sbjct: 402 PGLRGMDGIAGPPGLPGEMGKPGPPGFPGIPGAKGDHGS------PGPKGSQGLQGPRGE 455

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            G  G PG  G+PG  GK G  G+ G PG  G+    G PG PG+ G+PG NG  G PG 
Sbjct: 456 SGRPGQPGETGLPGIPGKDGSPGEKGNPGAPGI---SGPPGFPGVRGLPGVNGSPGQPGA 512

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G+PG  G +G KG TG  G R   G+ GVPG+
Sbjct: 513 KGNTGSPGVPGYKGESGAKGETGAPGPR---GLPGVPGS 548



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 82/170 (48%), Gaps = 24/170 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GLQGP G+ G  G  GE G+ G         E+G  GAPG+ GPPG    PG  G  G  
Sbjct: 448 GLQGPRGESGRPGQPGETGLPGIPGKDGSPGEKGNPGAPGISGPPG---FPGVRGLPGVN 504

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG +G  G  G  G KG+ G  G  G  G  GLPG PG +G  G+ GM G PG  
Sbjct: 505 GSPGQPGAKGNTGSPGVPGYKGESGAKGETGAPGPRGLPGVPGSEGKRGKRGMRGPPGPG 564

Query: 224 ------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                       GLPG DG  G  G  G++G  GP G +G  G  G PG 
Sbjct: 565 GPPGERGMPGARGLPGPDGAVGPKGQTGDRGSAGPPGPKGSLGEPGRPGA 614



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 84/179 (46%), Gaps = 30/179 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------GPQGIPGDEGKRGP 162
           PG  G  G+KG  GA G  G  G  G +G PGV G P         G  G+PG +G+ G 
Sbjct: 471 PGKDGSPGEKGNPGAPGISGPPGFPGVRGLPGVNGSPGQPGAKGNTGSPGVPGYKGESGA 530

Query: 163 KGDMGYPGPQ---GIPGDEGKRG------------------PKGDMGYPGRIGLDGRDGL 201
           KG+ G PGP+   G+PG EGKRG                    G  G PG  G  G  G 
Sbjct: 531 KGETGAPGPRGLPGVPGSEGKRGKRGMRGPPGPGGPPGERGMPGARGLPGPDGAVGPKGQ 590

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G  G PG  G  G PG+ G  G  G+ G  G  G +G +GP G RG  G +G PG
Sbjct: 591 TGDRGSAGPPGPKGSLGEPGRPGAVGPQGLRGLTGRPGPQGRSGPPGERGMPGADGKPG 649



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 67/138 (48%), Gaps = 24/138 (17%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKG 164
           E  PPG+ GP G +G  G  G  G+ G+ GE   +G PGV G  GP+G  G  G+RGP G
Sbjct: 713 ERGPPGVTGPRGFQGLPGTPGNQGMPGKDGEPGLQGPPGVPGNIGPRGERGFPGERGPVG 772

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G P                  G  G +G  G DG+ G PGL   PG  G  G PG  G
Sbjct: 773 QPGIP------------------GLKGNVGSPGPDGVQGPPGL---PGAKGHSGAPGLVG 811

Query: 225 LPGKDGIPGTNGTNGEKG 242
           LPG  G PG  G  GE+G
Sbjct: 812 LPGLRGQPGPQGEKGERG 829



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 88/214 (41%), Gaps = 57/214 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGP---------------PGPQGI 153
           PG QG  G+ GE G +G  GV G    RGE+G PG  GP               PGP G+
Sbjct: 732 PGNQGMPGKDGEPGLQGPPGVPGNIGPRGERGFPGERGPVGQPGIPGLKGNVGSPGPDGV 791

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG------------RIGLDGRDGL 201
            G  G  G KG  G PG  G+PG  G+ GP+G+ G  G            R G  G+ GL
Sbjct: 792 QGPPGLPGAKGHSGAPGLVGLPGLRGQPGPQGEKGERGSIGPVGPEGPPGRQGERGQQGL 851

Query: 202 ---------------------------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
                                      PG PG  G  G  G+ G PG  GL G  G+ G 
Sbjct: 852 MGPPGPPGEPAERGEPGPPGLPGESGAPGAPGERGPVGSPGLQGFPGPQGLVGLPGLKGD 911

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G KGM G  G+ GK G  G PG   +   K
Sbjct: 912 RGIPGLKGMQGNPGHVGKPGEQGPPGPIGLTGAK 945



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 61/139 (43%), Gaps = 36/139 (25%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
            G  G +G RGE G  G  GPPG +G PG  G  G KGD G PGP             G  
Sbjct: 1144 GLTGERGPRGETGPQGAEGPPGERGKPGVPGLEGKKGDRGEPGP------------AGSK 1191

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIP------------GRNGMDGIPGKDGLPGKDGIPGTN 235
            G+ G IGL G   LPG PG  G              G  G  G PG+DG PG  G+P   
Sbjct: 1192 GHRGLIGLQG---LPGSPGFPGEKGSPGNPGPPGKDGEAGSRGPPGRDGSPGPQGVP--- 1245

Query: 236  GTNGEKGMTGPRGNRGKSG 254
                  G+ GPRG  G  G
Sbjct: 1246 ------GLVGPRGGNGNDG 1258



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 56/103 (54%), Gaps = 3/103 (2%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  G  GERG  G+PG+ G PGPQG+ G  G    KGD G PG +G+ G+ G  G  G+ 
Sbjct: 877 GAPGAPGERGPVGSPGLQGFPGPQGLVGLPGL---KGDRGIPGLKGMQGNPGHVGKPGEQ 933

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           G PG IGL G  G  GE G  G  G  G  G PG  G PG  G
Sbjct: 934 GPPGPIGLTGAKGARGEAGTRGDAGLMGPPGRPGDSGPPGHPG 976



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 67/161 (41%), Gaps = 54/161 (33%)

Query: 152 GIPGDEGKRGP---------------------------------KGDMGYPGPQGIPGDE 178
           G+PG++G+ G                                  KG+ G PG +GIPG+ 
Sbjct: 316 GVPGEDGEAGQPGASGPPGPRGLPGMPGLPGVKGHRGFPGLDGIKGEQGPPGEKGIPGNP 375

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---------- 228
           G  GP G +G  G  G  GR+G  G PGL       GMDGI G  GLPG+          
Sbjct: 376 GPVGPSGPVGPSGPRGERGREGPQGSPGL------RGMDGIAGPPGLPGEMGKPGPPGFP 429

Query: 229 -----DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                 G  G+ G  G +G+ GPRG  G+ G  G  G P I
Sbjct: 430 GIPGAKGDHGSPGPKGSQGLQGPRGESGRPGQPGETGLPGI 470



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 50/95 (52%), Gaps = 12/95 (12%)

Query: 112 PGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGLQG   P G  G  G KG+ G+ G +G +G PG VG PG Q         GP G +G 
Sbjct: 891 PGLQGFPGPQGLVGLPGLKGDRGIPGLKGMQGNPGHVGKPGEQ---------GPPGPIGL 941

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            G +G  G+ G RG  G MG PGR G  G  G PG
Sbjct: 942 TGAKGARGEAGTRGDAGLMGPPGRPGDSGPPGHPG 976



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 77/189 (40%), Gaps = 57/189 (30%)

Query: 126  AKGEMGVKGERGEKGAPGVV------------------GPPGPQGIPGDEGKRGPK---- 163
            A GE+G  G+ G +GA G                    GP G  G+PG  G+ G K    
Sbjct: 1061 APGEVGTPGKPGSEGAQGPPGLTGPPGPPGPTGEQGPEGPSGKPGMPGVAGRTGDKGPVG 1120

Query: 164  -----------------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                                   G  G  GP+G  G +G  GP G+ G PG  GL+G+ G
Sbjct: 1121 PVGPPGPSGPPGLPGPPGPLGPIGLTGERGPRGETGPQGAEGPPGERGKPGVPGLEGKKG 1180

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---------NGEKGMTGPRGNRG 251
              GEPG  G  G  G+ G+    GLPG  G PG  G+         +GE G  GP G  G
Sbjct: 1181 DRGEPGPAGSKGHRGLIGL---QGLPGSPGFPGEKGSPGNPGPPGKDGEAGSRGPPGRDG 1237

Query: 252  KSGINGVPG 260
              G  GVPG
Sbjct: 1238 SPGPQGVPG 1246



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            +QGF        P GL G  G KG+ G  G  G++G  G  G PG  GPPGP G+ G +
Sbjct: 892 GLQGFPG------PQGLVGLPGLKGDRGIPGLKGMQGNPGHVGKPGEQGPPGPIGLTGAK 945

Query: 158 GKRGP---KGDMGYPGPQGIPGDEGKRG 182
           G RG    +GD G  GP G PGD G  G
Sbjct: 946 GARGEAGTRGDAGLMGPPGRPGDSGPPG 973


>gi|326681146|ref|XP_002665520.2| PREDICTED: collagen alpha-1(XXII) chain [Danio rerio]
          Length = 1623

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 91/177 (51%), Gaps = 23/177 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMG----VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           E   PGL+G  G  G  G KGE G    +KG+RGEKG  G  G PG   + GD G++G  
Sbjct: 497 EKGDPGLKGAEGPPGLKGLKGERGQAVSIKGDRGEKGDSGEFGEPG---LTGDRGEKGSD 553

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G  G +G  G+ G +G  G+ G PG +G  G  G  GE G  G  G  G DG PGK 
Sbjct: 554 GLPGLAGKKGDKGERGDQGVAGEAGLPGPLGPKGGAGNKGEKGSTGDQGERGADGFPGKP 613

Query: 224 GLPGKDGI------PGTNGTNGEKGMTGP----------RGNRGKSGINGVPGTPAI 264
           GLPGK+G+      PG NG  GEKG  GP           G +G++G  G  G P +
Sbjct: 614 GLPGKEGVRGLIGAPGPNGVKGEKGAQGPAGIPGDAIQLAGLKGETGAQGEAGLPGV 670



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/137 (45%), Positives = 73/137 (53%), Gaps = 7/137 (5%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG----IPGDEGKRGPKGDMGY 189
           GERG+ G PG  GP G +G PG +G  GP G  G  G +G    I GD G++G  G+ G 
Sbjct: 481 GERGDTGLPGAPGPKGEKGDPGLKGAEGPPGLKGLKGERGQAVSIKGDRGEKGDSGEFGE 540

Query: 190 PGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
           PG     G  G DGLPG  G  G  G  G  G+ G+ GLPG  G  G  G  GEKG TG 
Sbjct: 541 PGLTGDRGEKGSDGLPGLAGKKGDKGERGDQGVAGEAGLPGPLGPKGGAGNKGEKGSTGD 600

Query: 247 RGNRGKSGINGVPGTPA 263
           +G RG  G  G PG P 
Sbjct: 601 QGERGADGFPGKPGLPG 617



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 83/151 (54%), Gaps = 16/151 (10%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG------P 171
           +G+ G  G  G MG KGERG  G  G  G  G +G  GD+G+ GP+G  G PG      P
Sbjct: 834 LGESGLTGQVGPMGPKGERGNHGERGREGLSGAKGEKGDKGEIGPRGPAGAPGNVANVIP 893

Query: 172 Q-GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           + G PG  G++G KGD G PG +G   + GLPGE G  G PG  G  G  G  G PG+ G
Sbjct: 894 EPGEPGKPGEKGEKGDQGKPGDMG---QRGLPGEQGFRGQPGPVGPKGDAGDKGEPGRHG 950

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG        G+ GP+G+RG  G  G+PG+
Sbjct: 951 DPGP------PGLMGPQGSRGLPGNVGIPGS 975



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 10/137 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG-------DEGKRGPKGD 165
           G  GP G++G  G +G  G+ G +GEKG  G +GP GP G PG       + G+ G  G+
Sbjct: 844 GPMGPKGERGNHGERGREGLSGAKGEKGDKGEIGPRGPAGAPGNVANVIPEPGEPGKPGE 903

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            G  G QG PGD G+RG  G+ G+   PG +G  G  G  GEPG  G PG  G+ G  G 
Sbjct: 904 KGEKGDQGKPGDMGQRGLPGEQGFRGQPGPVGPKGDAGDKGEPGRHGDPGPPGLMGPQGS 963

Query: 223 DGLPGKDGIPGTNGTNG 239
            GLPG  GIPG+ G  G
Sbjct: 964 RGLPGNVGIPGSIGPPG 980



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/129 (44%), Positives = 69/129 (53%), Gaps = 15/129 (11%)

Query: 135  ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
            E+G++G  G+ GPPG  G+          G MG PG  G PG+ G+ G +G+ G PGR  
Sbjct: 1230 EKGKEGMTGIQGPPGLPGL---------MGMMGKPGKDGRPGESGEPGKQGEPGQPGR-- 1278

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             DG  G+PGE G  G+PGR G    PGKDG  G  G  G  G  GE G  G +G  GK G
Sbjct: 1279 -DGLRGMPGEEGKQGVPGREGQ---PGKDGNSGPPGPEGMRGPRGESGQPGEQGPTGKPG 1334

Query: 255  INGVPGTPA 263
              G PG P 
Sbjct: 1335 SQGNPGQPG 1343



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 86/174 (49%), Gaps = 21/174 (12%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPGL G +G  G+ G  G  G  GE G++G PG  G  G +G+PG+EGK+G  G  G PG
Sbjct: 1242 PPGLPGLMGMMGKPGKDGRPGESGEPGKQGEPGQPGRDGLRGMPGEEGKQGVPGREGQPG 1301

Query: 171  P---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR-------------- 213
                 G PG EG RGP+G+ G PG  G  G+ G  G PG  G  G               
Sbjct: 1302 KDGNSGPPGPEGMRGPRGESGQPGEQGPTGKPGSQGNPGQPGHKGEAGSPGLPGFPGPKG 1361

Query: 214  ----NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                 G  G  GK G+ GK G  G  G  G+ G+ G +G  G  GI G PG+P 
Sbjct: 1362 PSGPPGPIGPEGKQGMLGKAGDRGQKGEKGDNGIKGDKGPVGDPGIPGNPGSPG 1415



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 74/163 (45%), Gaps = 42/163 (25%)

Query: 140  GAPGVVGPPGPQGIPGDEGKR------------------------------------GPK 163
            GA GV G  GP G PGD+G++                                    G +
Sbjct: 1175 GAKGVKGDRGPAGTPGDKGEKGAPGPPGYPGAAGAMGQPGNDGNPGPVGTPGPPGEKGKE 1234

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---PGRNGMDGIP 220
            G  G  GP G+PG  G  G  G  G PG  G  G+ G PG+PG DG+   PG  G  G+P
Sbjct: 1235 GMTGIQGPPGLPGLMGMMGKPGKDGRPGESGEPGKQGEPGQPGRDGLRGMPGEEGKQGVP 1294

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G++G PGKD   G +G  G +GM GPRG  G+ G  G  G P 
Sbjct: 1295 GREGQPGKD---GNSGPPGPEGMRGPRGESGQPGEQGPTGKPG 1334



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 95/238 (39%), Gaps = 70/238 (29%)

Query: 93   RIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
            R P  A     N   E   PG  G  G+KG+ G  G+MG +G  GE+G  G  GP GP+G
Sbjct: 879  RGPAGAPGNVANVIPEPGEPGKPGEKGEKGDQGKPGDMGQRGLPGEQGFRGQPGPVGPKG 938

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG------------------ 194
              GD+G+ G  GD   PGP G+ G +G RG  G++G PG IG                  
Sbjct: 939  DAGDKGEPGRHGD---PGPPGLMGPQGSRGLPGNVGIPGSIGPPGIAGQKGDKGDGGKDG 995

Query: 195  ------------LDGRDGLP-----GEPG------------LDGIPGRNGMDGIPGKDGL 225
                        L G  GLP     GE G            L G+PG  GM G+PG  G 
Sbjct: 996  PPGPPGPTGEPGLRGEIGLPGKGKEGEKGDAGPPGIAGPPGLRGLPGNQGMQGMPGNRGP 1055

Query: 226  PGKD--------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            PG+                     G PG  G  G  G  G  G  G+ G  G PG  A
Sbjct: 1056 PGEGSPGSQGPPGPAGPPGAAGLRGPPGVAGVQGPAGHNGIPGRPGEKGSPGEPGKAA 1113



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 88/219 (40%), Gaps = 74/219 (33%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---------KGA--------------------PG 143
            G+QGP G  G  G  GE G  GE G+         KG                      G
Sbjct: 1086 GVQGPAGHNGIPGRPGEKGSPGEPGKAADLSDLNLKGVCSDCPAGPPGQPGIPGPPGDKG 1145

Query: 144  VVGPPGPQGIPG---------------DEGKRGPKGDMGYPGPQGIPGDEGKR------- 181
              GPPG  G  G                +G +G KGD    GP G PGD+G++       
Sbjct: 1146 HSGPPGKNGQDGYAGAPGPTGPAGPPGSDGAKGVKGDR---GPAGTPGDKGEKGAPGPPG 1202

Query: 182  --GPKGDMGYP------------------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
              G  G MG P                  G+ G+ G  G PG PGL G+ G+ G DG PG
Sbjct: 1203 YPGAAGAMGQPGNDGNPGPVGTPGPPGEKGKEGMTGIQGPPGLPGLMGMMGKPGKDGRPG 1262

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            + G PGK G PG  G +G +GM G  G +G  G  G PG
Sbjct: 1263 ESGEPGKQGEPGQPGRDGLRGMPGEEGKQGVPGREGQPG 1301



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 69/155 (44%), Gaps = 27/155 (17%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIP 154
             ++G      +   PG +G  G+ G  G  G  G++G RGE G PG  GP   PG QG P
Sbjct: 1280 GLRGMPGEEGKQGVPGREGQPGKDGNSGPPGPEGMRGPRGESGQPGEQGPTGKPGSQGNP 1339

Query: 155  GDEGKRGPKGDMGYP---------------------GPQGIPGDEGKRGPKGDMGYPGRI 193
            G  G +G  G  G P                     G  G  GD G++G KGD G  G  
Sbjct: 1340 GQPGHKGEAGSPGLPGFPGPKGPSGPPGPIGPEGKQGMLGKAGDRGQKGEKGDNGIKGDK 1399

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G  G  G+PG P   G PGR G  G+ G  G PG+
Sbjct: 1400 GPVGDPGIPGNP---GSPGRKGHTGMMGMSGPPGE 1431



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 8/65 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL+GP G KGE G+KGE G  G  G++G PG +GP GP G+PGD       G  G PG  
Sbjct: 1525 GLRGPAGPKGERGSKGEKGEDG-VGQRGEPGPIGPMGPAGMPGD-------GKDGLPGAA 1576

Query: 173  GIPGD 177
            G  G+
Sbjct: 1577 GAQGE 1581



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 43/82 (52%), Gaps = 8/82 (9%)

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            ++GP G+ G PG  G+ G  G  GPKG+ G  G  G DG  G  GEPG  G  G  GM G
Sbjct: 1508 RQGPTGEPGMPGQNGVEGLRGPAGPKGERGSKGEKGEDGV-GQRGEPGPIGPMGPAGMPG 1566

Query: 219  IPGKDGLPGKDGIPGTNGTNGE 240
                    GKDG+PG  G  GE
Sbjct: 1567 D-------GKDGLPGAAGAQGE 1581


>gi|402902462|ref|XP_003914121.1| PREDICTED: collagen alpha-1(IV) chain-like, partial [Papio anubis]
          Length = 1307

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 101/199 (50%), Gaps = 28/199 (14%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA--PGVVGPPGPQGI- 153
           V   G   +  E   PG+ GP G  G  G KG  G KG+ G  G   PG+ G  G QGI 
Sbjct: 651 VGGMGLPGTPGEKGVPGIPGPQGSPGLPGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIA 710

Query: 154 --PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
             PG  G++G KG +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIP
Sbjct: 711 GFPGSPGEKGEKGSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIP 767

Query: 212 GRNGMDGIP---------GKDGLPGKDGIPGTNGTNGEKGMT-----------GPRGNRG 251
           G  G  G+P         G+ G PG DGIPG+ G  GE G+            G +G++G
Sbjct: 768 GVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKG 827

Query: 252 KSGINGVPGTPAICAYKRE 270
           + G  G+ G+P I   K E
Sbjct: 828 EVGFPGLAGSPGIPGSKGE 846



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 93/185 (50%), Gaps = 33/185 (17%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG    T +   PGL G   Q+G  G  G  G KGE G  G PG  G PGP G+PG  G+
Sbjct: 486 QGLPGVTGQSGLPGLPG---QQGSPGIPGFPGSKGEMGVMGTPGQPGSPGPVGVPGLPGE 542

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------------------------IGL 195
              KGD G+PG  G  GD G +G KGD+G PG+                        IG 
Sbjct: 543 ---KGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGP 599

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G+PG  G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+
Sbjct: 600 IGEKGSRGDPGTPGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGL 656

Query: 256 NGVPG 260
            G PG
Sbjct: 657 PGTPG 661



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 92/196 (46%), Gaps = 38/196 (19%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
           GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 598 GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 657

Query: 167 ---------GYPGPQ---GIPGDEGKRGPKGDM--------GYPGRIGLDGRDGLPGEP- 205
                    G PGPQ   G+PG++G +G KG          G PG  G  G  G PG P 
Sbjct: 658 GTPGEKGVPGIPGPQGSPGLPGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIAGFPGSPG 717

Query: 206 --------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                   G+ G+PG  G+ G PG  G PG  G+PG  G  G  G+ G  G +G++G+ G
Sbjct: 718 EKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPG 777

Query: 258 VPGTPAICAYKRESCS 273
            PG       K E  S
Sbjct: 778 TPGPTGPAGQKGEPGS 793



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 90/176 (51%), Gaps = 26/176 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVG-P--PGPQGIPGDEGKRGP 162
           PG  GP G  G  G  G  G+ G +G        G PG  G P  PGPQG PG  G++G 
Sbjct: 624 PGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGEKGA 683

Query: 163 KGDMGYPGPQ--GIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGRN 214
           KG  G  GP   GIPG  G++G +G  G+PG  G  G        G+PG PGL G PG  
Sbjct: 684 KGAKGQAGPPGIGIPGLPGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSV 743

Query: 215 GMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGT 261
           G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G +G+PG+
Sbjct: 744 GYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGS 799



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 84/170 (49%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGP 162
           PG  GP+G  G  G KG+ G  G  G +G PG+ G  G  G+PG  G          +G 
Sbjct: 528 PGSPGPVGVPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQ 587

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-- 220
           KGD G    +G  G  G++G +GD G PG  G DG+ G PG+PG  G PG +G  G P  
Sbjct: 588 KGDQGE---KGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGL 644

Query: 221 ----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                     G  G PG+ G+PG  G  G  G+ G +G +G  G  G PG
Sbjct: 645 PGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGEKGAKGAKGQAGPPG 694



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 89/179 (49%), Gaps = 31/179 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMGY 168
           PGL  P G KG+ G++G  GV G+ G  G PG  G PG  G PG +G+ G     G  G 
Sbjct: 472 PGLDMP-GPKGDKGSQGLPGVTGQSGLPGLPGQQGSPGIPGFPGSKGEMGVMGTPGQPGS 530

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD---------- 217
           PGP G+PG  G+   KGD G+PG  G  G  GL G+ G  G+PG+ G MD          
Sbjct: 531 PGPVGVPGLPGE---KGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQ 587

Query: 218 -------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                        G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 588 KGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 646



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 96/220 (43%), Gaps = 38/220 (17%)

Query: 44  KGDIFDNSVPQTPHVEFVP--------PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIP 95
           KG +    +P TP  + VP        P L  E   +  + Q                 P
Sbjct: 648 KGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGEKGAKGAKGQAGP--------------P 693

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            + + G      +    G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG
Sbjct: 694 GIGIPGLPGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPG 753

Query: 156 DEGKRG-------P--KGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           ++G +G       P  KG+ G PG   P G     G++G  G  G PG  G  G  GLPG
Sbjct: 754 EKGDKGLPGLDGIPGVKGEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPG 810

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G  G PG  G  G  G+ G PG  G PG  G+ GE+G 
Sbjct: 811 R-GFPGFPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGF 849



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 90/197 (45%), Gaps = 54/197 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG  GP GQKGE G+ G  G  GE+GE G PG   P    G PG +G +G KG++G+PG 
Sbjct: 779 PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGFPGL 834

Query: 171 --PQGIPGDEGKRG-----------------------PKGD---------------MGYP 190
               GIPG +G++G                       PKGD               MG P
Sbjct: 835 AGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPP 894

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPR 247
           G  G+DG  G  G PG  G PG      +PG  G PG  G+PG  G+    G KG  GP 
Sbjct: 895 GLPGIDGVKGDKGNPGWPGAPG------VPGPKGDPGFQGMPGIGGSPGITGSKGDMGPP 948

Query: 248 GNRGKSGINGVPGTPAI 264
           G  G  G  GVPG   I
Sbjct: 949 GVPGFQGPKGVPGLQGI 965



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 59/116 (50%), Gaps = 28/116 (24%)

Query: 123 EIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG--- 176
           EIG  G+ G KG+RG     G  GV   PGPQG P         G +G PG +G PG   
Sbjct: 125 EIGFPGQPGAKGDRGLPGRDGVAGV---PGPQGTP---------GLIGQPGAKGEPGEIY 172

Query: 177 -DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            D   +G KGD G+PG+         PG PG  G PGR+G  G+PG  G PG  G+
Sbjct: 173 FDLRLKGDKGDPGFPGQ---------PGMPGRAGSPGRDGHAGLPGPKGSPGSVGL 219



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 61/145 (42%), Gaps = 52/145 (35%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 282 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 341

Query: 184 KGDM------------GYPGR-----------IGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GDM            G PG            +GL G  GLPG PG+ G PG  G  G+P
Sbjct: 342 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVP 401

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTG 245
                    GIPG +G  G  G+ G
Sbjct: 402 ---------GIPGEHGAIGPPGLQG 417


>gi|348533297|ref|XP_003454142.1| PREDICTED: collagen alpha-1(IX) chain-like [Oreochromis niloticus]
          Length = 679

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/202 (41%), Positives = 106/202 (52%), Gaps = 38/202 (18%)

Query: 86  VWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE---------------- 129
           + +  YS +P   M+G      E   PG QG  G +GE G  GE                
Sbjct: 168 LGITGYSGLP--GMKGHKGVKGESGEPGRQGHKGDEGEQGLPGEVGSQGLPGPAGSRGLP 225

Query: 130 --MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG----- 182
             MG KG+RG +G PG +GP G QG PGD G+RGP G+ G   P+G+ GD G  G     
Sbjct: 226 GIMGSKGDRGPRGNPGDIGPRGIQGAPGDPGQRGPIGENG---PKGVLGDRGPPGIRGVP 282

Query: 183 -PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            PKGD G PG    DGR+G+PG PG  G+PG+NG  G  G  GLP   G+P   G  G+K
Sbjct: 283 GPKGDPGLPG---PDGREGIPGLPGSKGLPGKNGAPGDAGPQGLP---GLP---GAYGQK 333

Query: 242 GMTGPRGNRGKSGINGVPGTPA 263
           G  G +GN G  G+ G+ G+P 
Sbjct: 334 GHGGAKGNTGDPGVVGLMGSPG 355



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 94/174 (54%), Gaps = 18/174 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------GPPGPQGIP------GDEGK 159
           PG++G  G KGE G  G  G KG+ GE+G PG V      GP G +G+P      GD G 
Sbjct: 177 PGMKGHKGVKGESGEPGRQGHKGDEGEQGLPGEVGSQGLPGPAGSRGLPGIMGSKGDRGP 236

Query: 160 RGPKGDMGYPGPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           RG  GD+G  G QG PGD G+R      GPKG +G  G  G+ G  G  G+PGL G  GR
Sbjct: 237 RGNPGDIGPRGIQGAPGDPGQRGPIGENGPKGVLGDRGPPGIRGVPGPKGDPGLPGPDGR 296

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G+ G+PG  GLPGK+G PG  G  G  G+ G  G +G  G  G  G P +   
Sbjct: 297 EGIPGLPGSKGLPGKNGAPGDAGPQGLPGLPGAYGQKGHGGAKGNTGDPGVVGL 350



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/133 (43%), Positives = 70/133 (52%), Gaps = 18/133 (13%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  G+ G +G KG PG+ G PGP G  G +G RG  G  G  G QG+PG EG  G +GD+
Sbjct: 385 GPPGLSGAKGSKGNPGLPGLPGPAGFRGQKGDRGAVGLDGPKGDQGLPGAEGTAGERGDV 444

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G PG          PGE G  G PG  G  G  G  GLPGK+         G+ G  GPR
Sbjct: 445 GEPGE---------PGEKGSSGPPGETGNKGPEGSRGLPGKE---------GKLGQPGPR 486

Query: 248 GNRGKSGINGVPG 260
           G +G  G+ G+PG
Sbjct: 487 GMQGDMGVPGLPG 499



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 90/188 (47%), Gaps = 42/188 (22%)

Query: 112 PGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +GPIG+   KG +G +G  G++G  G KG PG+ GP G +GIPG  G +G  G  G 
Sbjct: 255 PGQRGPIGENGPKGVLGDRGPPGIRGVPGPKGDPGLPGPDGREGIPGLPGSKGLPGKNGA 314

Query: 169 P---GPQGIP------GDEGKRGPKGDMGYPGRIGLDGRDGLPGE--------------- 204
           P   GPQG+P      G +G  G KG+ G PG +GL G  G  GE               
Sbjct: 315 PGDAGPQGLPGLPGAYGQKGHGGAKGNTGDPGVVGLMGSPGKQGEYGDQGEVGPIGPRGG 374

Query: 205 ------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                       PGL G  G  G  G+P   GLPG  G  G  G  G  G+ GP+G++G 
Sbjct: 375 PGERGERGPDGPPGLSGAKGSKGNPGLP---GLPGPAGFRGQKGDRGAVGLDGPKGDQGL 431

Query: 253 SGINGVPG 260
            G  G  G
Sbjct: 432 PGAEGTAG 439



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 94/218 (43%), Gaps = 58/218 (26%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------------ 161
           L GP G KGE GA+G +G  G  G  G PG +G  GP   PG  G+RG            
Sbjct: 95  LVGPKGSKGESGARGPLGETGIPGSDGLPGELGKVGP---PGARGRRGQVGLPGPRGPRG 151

Query: 162 ---------------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPG 203
                          P G  GY    G+PG +G +G KG+ G PGR G    +G  GLPG
Sbjct: 152 PPAVYEGKDLCPNACPLGITGY---SGLPGMKGHKGVKGESGEPGRQGHKGDEGEQGLPG 208

Query: 204 EPGLDGIPGRNGMDGIP------------------GKDGLPGKDGIPGTNGTNGEKGMTG 245
           E G  G+PG  G  G+P                  G  G+ G  G PG  G  GE G  G
Sbjct: 209 EVGSQGLPGPAGSRGLPGIMGSKGDRGPRGNPGDIGPRGIQGAPGDPGQRGPIGENGPKG 268

Query: 246 PRGNRGKSGINGVPGT---PAICAY-KRESCSLLPNSE 279
             G+RG  GI GVPG    P +     RE    LP S+
Sbjct: 269 VLGDRGPPGIRGVPGPKGDPGLPGPDGREGIPGLPGSK 306



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 87/196 (44%), Gaps = 60/196 (30%)

Query: 128 GEMGVKGERGEKGAPGVVGPPG---------------PQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  GE G+ GAPG  G PG               P+G  G+ G RGP G+ G PG  
Sbjct: 61  GAPGPDGENGKDGAPGAPGIPGADGPVGPPGDPGLVGPKGSKGESGARGPLGETGIPGSD 120

Query: 173 GIPGDEGKRGPKGDMGYPGRIGL-------------DGRD--------------GLPGEP 205
           G+PG+ GK GP G  G  G++GL             +G+D              GLPG  
Sbjct: 121 GLPGELGKVGPPGARGRRGQVGLPGPRGPRGPPAVYEGKDLCPNACPLGITGYSGLPGMK 180

Query: 206 GLDGI------PGRNGMDGIPGKDGLPGK---DGIPGTNGTN------GEKGMTGPRGNR 250
           G  G+      PGR G  G  G+ GLPG+    G+PG  G+       G KG  GPRGN 
Sbjct: 181 GHKGVKGESGEPGRQGHKGDEGEQGLPGEVGSQGLPGPAGSRGLPGIMGSKGDRGPRGNP 240

Query: 251 ---GKSGINGVPGTPA 263
              G  GI G PG P 
Sbjct: 241 GDIGPRGIQGAPGDPG 256



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 81/175 (46%), Gaps = 27/175 (15%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G+QG  G  G+ G  GE G KG  G++G PG+ G PGP+G PG  G  G +G  G PG
Sbjct: 245 PRGIQGAPGDPGQRGPIGENGPKGVLGDRGPPGIRGVPGPKGDPGLPGPDGREGIPGLPG 304

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK-------- 222
            +G+PG  G  G  G  G PG  G  G+ G  G  G  G PG  G+ G PGK        
Sbjct: 305 SKGLPGKNGAPGDAGPQGLPGLPGAYGQKGHGGAKGNTGDPGVVGLMGSPGKQGEYGDQG 364

Query: 223 -------------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                              DG PG  G  G+ G  G  G+ GP G RG+ G  G 
Sbjct: 365 EVGPIGPRGGPGERGERGPDGPPGLSGAKGSKGNPGLPGLPGPAGFRGQKGDRGA 419



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 86/189 (45%), Gaps = 36/189 (19%)

Query: 108 EYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP------G 155
           +  PPG++G   P G  G  G  G  G+ G  G KG PG  G PG   PQG+P      G
Sbjct: 272 DRGPPGIRGVPGPKGDPGLPGPDGREGIPGLPGSKGLPGKNGAPGDAGPQGLPGLPGAYG 331

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG------------------YPGRIGLDG 197
            +G  G KG+ G PG  G+ G  GK+G  GD G                    G  GL G
Sbjct: 332 QKGHGGAKGNTGDPGVVGLMGSPGKQGEYGDQGEVGPIGPRGGPGERGERGPDGPPGLSG 391

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G  G PGL G+PG  G  G  G       DG  G  G+PG  GT GE+G  G  G  G
Sbjct: 392 AKGSKGNPGLPGLPGPAGFRGQKGDRGAVGLDGPKGDQGLPGAEGTAGERGDVGEPGEPG 451

Query: 252 KSGINGVPG 260
           + G +G PG
Sbjct: 452 EKGSSGPPG 460



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP--RGNRGKSGINGVPGTPAIC 265
           +G PG  G  G+PG  G PG  GI G  G  G+KG  GP  RG +G+ G  G+PG P   
Sbjct: 558 NGFPGHTGSRGLPGLKGPPGLMGIKGPKGDQGDKGDRGPITRGPKGEPGAPGLPGNPGRP 617

Query: 266 AYKRES 271
           AY R+ 
Sbjct: 618 AYGRDG 623


>gi|11120710|ref|NP_068528.1| collagen alpha-3(V) chain precursor [Rattus norvegicus]
 gi|8568094|gb|AAF76432.1|AF272661_1 alpha 4 type V collagen [Rattus norvegicus]
 gi|149020547|gb|EDL78352.1| procollagen, type V, alpha 3, isoform CRA_b [Rattus norvegicus]
          Length = 1737

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/171 (43%), Positives = 89/171 (52%), Gaps = 27/171 (15%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G KG  G +G  G KGERGE G PG  G         DEG +G +G+ G PG
Sbjct: 702 PQGYPGPRGVKGTSGNRGLQGEKGERGEDGFPGFKG---------DEGPKGDRGNPGLPG 752

Query: 171 PQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP------- 220
           P+G  G EG++GP+G   D G PG  G  G+ G+PG PG  G PG  G  G P       
Sbjct: 753 PRGEDGPEGQKGPEGLPGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPLG 812

Query: 221 -----GKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                GK G PG++   G PGT G  G+ G TG  G +G  G NG PG P 
Sbjct: 813 EKGKRGKAGQPGEEGERGTPGTRGDRGQPGATGQPGPKGDVGQNGSPGAPG 863



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 87/186 (46%), Gaps = 36/186 (19%)

Query: 112 PGLQGPIGQKGE------------------IGAKGEMGVKGERGEKGAPGVVGP---PGP 150
           PG QGPIG  GE                   G  G  G  GE+G +G PG  GP   PGP
Sbjct: 649 PGPQGPIGTPGEKGPPGNPGIPGVPGSEGPPGHPGHEGPTGEKGAQGPPGSAGPQGYPGP 708

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG---------L 201
           +G+ G  G RG +G+ G  G  G PG +G  GPKGD G PG  G  G DG         L
Sbjct: 709 RGVKGTSGNRGLQGEKGERGEDGFPGFKGDEGPKGDRGNPGLPGPRGEDGPEGQKGPEGL 768

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGI 255
           PG+ G  G  G  G  G+PG  G PG+       G PG  G  GEKG  G  G  G+ G 
Sbjct: 769 PGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPGEEGE 828

Query: 256 NGVPGT 261
            G PGT
Sbjct: 829 RGTPGT 834



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 88/170 (51%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G+ G  G KG  G+ G+ G  GA G  G  G  G+PG  G+ GPKG +G+PGP
Sbjct: 748 PGLPGPRGEDGPEGQKGPEGLPGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGP 807

Query: 172 QGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G++GKR      G +G+ G PG  G  G+ G  G+PG  G  G+NG  G PG+ GL
Sbjct: 808 LGPLGEKGKRGKAGQPGEEGERGTPGTRGDRGQPGATGQPGPKGDVGQNGSPGAPGEKGL 867

Query: 226 ------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                              GKDGIPG  G  GE G  G  G  G +G+ G
Sbjct: 868 PGLQGPPGFPGPKGPPGPQGKDGIPGHPGQRGELGFQGQTGPPGPAGVLG 917



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 86/176 (48%), Gaps = 27/176 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
            PG  GPIG KG+ G  G +G  G  GE+G    VGP G  G+PG  G +   GP G+ G 
Sbjct: 982  PGDPGPIGLKGDKGPPGPLGANGSPGERGP---VGPSGGIGLPGQSGGQGPIGPAGEKGS 1038

Query: 169  PGPQGIPGDEGK---------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            PG +G+PG  GK                GP G+ G  G +G+ G  G  G+ G  G PG 
Sbjct: 1039 PGERGVPGPTGKDGIPGPPGLQGPPGAAGPSGEEGDKGEVGMPGHKGSKGDKGDAGPPGP 1098

Query: 214  NGM------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+       G PG DG  G+ G PG  G  G+ G+ G  G  G  G+ G+PG P 
Sbjct: 1099 TGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPG 1154



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 82/174 (47%), Gaps = 18/174 (10%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---GVVGPPGPQG 152
           L   +G      +  P GL G  G  G  G KG++GV G  G  G P   G +G PGP G
Sbjct: 750 LPGPRGEDGPEGQKGPEGLPGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLG 809

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI-- 210
             G++GKRG  G  G  G +G PG  G RG  G  G PG  G  G++G PG PG  G+  
Sbjct: 810 PLGEKGKRGKAGQPGEEGERGTPGTRGDRGQPGATGQPGPKGDVGQNGSPGAPGEKGLPG 869

Query: 211 -------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                        PG  G DGIPG  G  G+ G  G  G  G  G+ GP+G  G
Sbjct: 870 LQGPPGFPGPKGPPGPQGKDGIPGHPGQRGELGFQGQTGPPGPAGVLGPQGKVG 923



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 6/119 (5%)

Query: 151 QGIPGDEGKRGPKGDMGY------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           +G PG  G  GP G+ G        GPQG PG  G +G  G+ G  G  G  G DG PG 
Sbjct: 676 EGPPGHPGHEGPTGEKGAQGPPGSAGPQGYPGPRGVKGTSGNRGLQGEKGERGEDGFPGF 735

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G +G  G  G  G+PG  G  G +G  G  G  G++G  G  G +GK G+ G+PG P 
Sbjct: 736 KGDEGPKGDRGNPGLPGPRGEDGPEGQKGPEGLPGDEGPPGAAGEKGKLGVPGLPGYPG 794



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 77/169 (45%), Gaps = 36/169 (21%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG-- 176
            G  G+ G+ G MG +G+ GEKGA G  GP GP G  G  G RGP G +G   P G+PG  
Sbjct: 1304 GLPGKRGSPGRMGPEGKEGEKGAKGDAGPDGPPGRTGPIGARGPPGRVG---PDGLPGIP 1360

Query: 177  ----------------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                                         +G  G KG+ G+ G IGL G  G  GE G  
Sbjct: 1361 GPVGEPGLLGPPGLIGPPGPLGPPGLPGLKGDAGLKGEKGHIGLIGLIGPPGEAGEKGDQ 1420

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G+PG  G  G+ G  GLPG     G+ G  G  G+ GP G +G  G  G
Sbjct: 1421 GLPGVQGPPGLQGDPGLPGPV---GSLGHPGPPGVVGPLGQKGSKGSPG 1466



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 81/203 (39%), Gaps = 69/203 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQG---------------- 152
            PG +GP+G  G IG  G+ G +G     GEKG+PG  G PGP G                
Sbjct: 1006 PGERGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGERGVPGPTGKDGIPGPPGLQGPPGA 1065

Query: 153  --------------IPGDEGKRGPKGDMGYPGPQGI------------PGDEGKRGPKGD 186
                          +PG +G +G KGD G PGP GI             G +G+RGP G 
Sbjct: 1066 AGPSGEEGDKGEVGMPGHKGSKGDKGDAGPPGPTGIRGPAGHPGPPGADGAQGRRGPPGL 1125

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG------------------------IPGK 222
             G  G  G+ G  G+ G PGL G+PG  G  G                          G 
Sbjct: 1126 FGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPPGPSGSAGS 1185

Query: 223  DGLPGKDGIPGTNGTNGEKGMTG 245
             GLPG  G PG  G  GE G  G
Sbjct: 1186 PGLPGGVGQPGAVGEKGEPGNAG 1208



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 67/152 (44%), Positives = 82/152 (53%), Gaps = 21/152 (13%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGD 177
            +G  GAKGE+G  G  G++G PG +G PGPQG PGD G  G KGD G PGP    G PG+
Sbjct: 949  EGREGAKGELGPLGSLGKEGPPGPMGFPGPQGAPGDPGPIGLKGDKGPPGPLGANGSPGE 1008

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMD---------------GI 219
             G  GP G +G PG+ G  G  G  GE   PG  G+PG  G D               G 
Sbjct: 1009 RGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGERGVPGPTGKDGIPGPPGLQGPPGAAGP 1068

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G++G  G+ G+PG  G+ G+KG  GP G  G
Sbjct: 1069 SGEEGDKGEVGMPGHKGSKGDKGDAGPPGPTG 1100



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 89/245 (36%), Gaps = 102/245 (41%)

Query: 112  PGLQGPIGQKG------EIGAKGEMGVKGERGEKGAPGVVGPPGPQ-------------- 151
            PG  GP+G+KG      + G +GE G  G RG++G PG  G PGP+              
Sbjct: 805  PGPLGPLGEKGKRGKAGQPGEEGERGTPGTRGDRGQPGATGQPGPKGDVGQNGSPGAPGE 864

Query: 152  -------------------------GIPGDEGKR---------GPKGDMGYPGPQGIPGD 177
                                     GIPG  G+R         GP G  G  GPQG  GD
Sbjct: 865  KGLPGLQGPPGFPGPKGPPGPQGKDGIPGHPGQRGELGFQGQTGPPGPAGVLGPQGKVGD 924

Query: 178  ------------------------EGKRGPKGDMGY------------------------ 189
                                    EG+ G KG++G                         
Sbjct: 925  VGPLGERGPPGPPGPPGEPGLPGIEGREGAKGELGPLGSLGKEGPPGPMGFPGPQGAPGD 984

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PG IGL G  G PG  G +G PG  G  G  G  GLPG+ G  G  G  GEKG  G RG 
Sbjct: 985  PGPIGLKGDKGPPGPLGANGSPGERGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGERGV 1044

Query: 250  RGKSG 254
             G +G
Sbjct: 1045 PGPTG 1049



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 84/215 (39%), Gaps = 69/215 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG------------EKGAPGVVGPPGPQGIPGDEGK 159
           PG  GP G +G  G  G  G KG+RG            E G  G+ GPPGP G  G+ G 
Sbjct: 538 PGDTGPKGDRGFDGLPGLPGEKGQRGDFGPVGQPGPPGEDGIKGLQGPPGPTGQAGEPGP 597

Query: 160 R------------------------GPKGDM------------------GYPGPQGIPGD 177
           R                        G KG++                  G PGPQG  G 
Sbjct: 598 RGLIGPRGPPGPLGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQGPIGT 657

Query: 178 EGKR---------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            G++               GP G  G+ G  G  G  G PG  G  G PG  G+ G  G 
Sbjct: 658 PGEKGPPGNPGIPGVPGSEGPPGHPGHEGPTGEKGAQGPPGSAGPQGYPGPRGVKGTSGN 717

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GL G+ G  G +G  G KG  GP+G+RG  G+ G
Sbjct: 718 RGLQGEKGERGEDGFPGFKGDEGPKGDRGNPGLPG 752



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 93/255 (36%), Gaps = 102/255 (40%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVK---------------------------GERGEKGAPGV 144
            PG +G +GQ G  GA GE G+                            G+RGE G  G 
Sbjct: 847  PGPKGDVGQNGSPGAPGEKGLPGLQGPPGFPGPKGPPGPQGKDGIPGHPGQRGELGFQGQ 906

Query: 145  VGPPGPQGIPGD------------------------------EGKRGPKGDMGY------ 168
             GPPGP G+ G                               EG+ G KG++G       
Sbjct: 907  TGPPGPAGVLGPQGKVGDVGPLGERGPPGPPGPPGEPGLPGIEGREGAKGELGPLGSLGK 966

Query: 169  ------------------PGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGL 207
                              PGP G+ GD+G  GP G  G PG    +G  G  GLPG+ G 
Sbjct: 967  EGPPGPMGFPGPQGAPGDPGPIGLKGDKGPPGPLGANGSPGERGPVGPSGGIGLPGQSGG 1026

Query: 208  DGIPGRNGMDGIPGKDGLP---GKD---------------GIPGTNGTNGEKGMTGPRGN 249
             G  G  G  G PG+ G+P   GKD               G  G  G  GE GM G +G+
Sbjct: 1027 QGPIGPAGEKGSPGERGVPGPTGKDGIPGPPGLQGPPGAAGPSGEEGDKGEVGMPGHKGS 1086

Query: 250  RGKSGINGVPGTPAI 264
            +G  G  G PG   I
Sbjct: 1087 KGDKGDAGPPGPTGI 1101



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 69/159 (43%), Gaps = 39/159 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGPPGPQGIP----------- 154
            PG  GP G++GE GAKG+ G  G  G       +G PG VGP G  GIP           
Sbjct: 1312 PGRMGPEGKEGEKGAKGDAGPDGPPGRTGPIGARGPPGRVGPDGLPGIPGPVGEPGLLGP 1371

Query: 155  -------------------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                               GD G +G KG +G  G  G PG+ G+   KGD G PG  G 
Sbjct: 1372 PGLIGPPGPLGPPGLPGLKGDAGLKGEKGHIGLIGLIGPPGEAGE---KGDQGLPGVQGP 1428

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
             G  G PG PG  G  G  G  G+ G  G  G  G PG+
Sbjct: 1429 PGLQGDPGLPGPVGSLGHPGPPGVVGPLGQKGSKGSPGS 1467



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 68/156 (43%), Gaps = 42/156 (26%)

Query: 139  KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            +G PG  G PG  G  G EG++G KGD G  GP G  G  G RGP      PGR+G DG 
Sbjct: 1303 RGLPGKRGSPGRMGPEGKEGEKGAKGDAGPDGPPGRTGPIGARGP------PGRVGPDGL 1356

Query: 199  DGLP------------------------------GEPGLDGIPGRNGMDGI---PGKDGL 225
             G+P                              G+ GL G  G  G+ G+   PG+ G 
Sbjct: 1357 PGIPGPVGEPGLLGPPGLIGPPGPLGPPGLPGLKGDAGLKGEKGHIGLIGLIGPPGEAGE 1416

Query: 226  PGKDGIPGTNGT---NGEKGMTGPRGNRGKSGINGV 258
             G  G+PG  G     G+ G+ GP G+ G  G  GV
Sbjct: 1417 KGDQGLPGVQGPPGLQGDPGLPGPVGSLGHPGPPGV 1452



 Score = 39.3 bits (90), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 90/253 (35%), Gaps = 96/253 (37%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPPGPQG 152
           PPG  G  G+ G +G  G  G+KGE GE                  +G  G  G  G +G
Sbjct: 477 PPGPVGLTGRPGPVGLPGYPGLKGELGEAGPQGPRGLQGPPGPPGREGKTGRAGADGARG 536

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------------------------PKGDMG 188
           +PGD    GPKGD G+ G  G+PG++G+RG                        P G  G
Sbjct: 537 LPGD---TGPKGDRGFDGLPGLPGEKGQRGDFGPVGQPGPPGEDGIKGLQGPPGPTGQAG 593

Query: 189 YPG---------------RIGLDGRDGLPGEPG------------------LDGIPGRNG 215
            PG               R G+ G DG PG  G                    GIPG  G
Sbjct: 594 EPGPRGLIGPRGPPGPLGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQG 653

Query: 216 MDGIPGKD------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G PG+                   G PG +G  G  G  G  G  GP+G  G  G+ G
Sbjct: 654 PIGTPGEKGPPGNPGIPGVPGSEGPPGHPGHEGPTGEKGAQGPPGSAGPQGYPGPRGVKG 713

Query: 258 VPGTPAICAYKRE 270
             G   +   K E
Sbjct: 714 TSGNRGLQGEKGE 726


>gi|403273052|ref|XP_003928340.1| PREDICTED: collagen alpha-1(IV) chain [Saimiri boliviensis
            boliviensis]
          Length = 1731

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 101/202 (50%), Gaps = 34/202 (16%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--------VVGPP 148
            V   G   +  E   PG+ GP   +G  G  GE G KGE+G+ G PG        V G  
Sbjct: 1075 VGGMGLPGTPGEKGVPGIPGP---QGAPGLPGEKGAKGEKGQAGPPGIGIPGLPGVKGDQ 1131

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  G PG  G++G KG +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLD
Sbjct: 1132 GIAGFPGSPGEKGEKGSIGIPG---VPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLD 1188

Query: 209  GIPGRNGMDGIP---------GKDGLPGKDGIPGTNGTNGEKGM-----------TGPRG 248
            GIPG  G  G+P         G+ G PG DGIPG+ G  GE G+            G +G
Sbjct: 1189 GIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKG 1248

Query: 249  NRGKSGINGVPGTPAICAYKRE 270
            ++G+ G  G+ G+P I   K E
Sbjct: 1249 SKGEVGFPGLAGSPGIPGAKGE 1270



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 90/171 (52%), Gaps = 26/171 (15%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  GIPG  G  GPKG +      
Sbjct: 1022 GPIGEKGSRGDPGSPGVPGKDGQAGQPGQPGPKGDPGISGIPGSPGLPGPKGSVGGMGLP 1081

Query: 167  ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
                     G PGPQG PG  G++G KG+        +G PG  G+ G  G+ G PG  G
Sbjct: 1082 GTPGEKGVPGIPGPQGAPGLPGEKGAKGEKGQAGPPGIGIPGLPGVKGDQGIAGFPGSPG 1141

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  GIPG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG
Sbjct: 1142 EKGEKGSIGIPGVPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 1192



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 86/179 (48%), Gaps = 36/179 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 925  PGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPVGSPG---LPGE------KGDHGFPGS 975

Query: 172  QGIPGDEGKRGPKGDMGYPGR---------------------------IGLDGRDGLPGE 204
             G  GD G +G KGD G PG+                           IG  G  G PG 
Sbjct: 976  SGPRGDPGLKGDKGDAGLPGKPGSMDKVDMENMKGEKGDQGEKGQIGPIGEKGSRGDPGS 1035

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            PG+ G  G+ G  G PG  G PG  GIPG+ G  G KG  G  G  G  G  GVPG P 
Sbjct: 1036 PGVPGKDGQAGQPGQPGPKGDPGISGIPGSPGLPGPKGSVGGMGLPGTPGEKGVPGIPG 1094



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 82/153 (53%), Gaps = 29/153 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+KG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD   PG  GIPG  
Sbjct: 1010 GEKGDQGEKGQIGPIGEKGSRGDPGSPGVPGKDGQAGQPGQPGPKGD---PGISGIPGSP 1066

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GPKG +G     G+    GLPG PG  G+PG      IPG  G PG   +PG  G  
Sbjct: 1067 GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGAPG---LPGEKGAK 1108

Query: 239  GEKGMTGP--------RGNRGKSGINGVPGTPA 263
            GEKG  GP         G +G  GI G PG+P 
Sbjct: 1109 GEKGQAGPPGIGIPGLPGVKGDQGIAGFPGSPG 1141



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 90/187 (48%), Gaps = 33/187 (17%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
              QG    T +   PGL G   Q+G  G  G  G KGE G  G PG  G PGP G PG  
Sbjct: 908  GAQGLPGITGQSGLPGLPG---QQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPVGSPGLP 964

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------------------------I 193
            G+   KGD G+PG  G  GD G +G KGD G PG+                        I
Sbjct: 965  GE---KGDHGFPGSSGPRGDPGLKGDKGDAGLPGKPGSMDKVDMENMKGEKGDQGEKGQI 1021

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G  G  G  G+PG  G+PG++G  G PG+   PG  G PG +G  G  G+ GP+G+ G  
Sbjct: 1022 GPIGEKGSRGDPGSPGVPGKDGQAGQPGQ---PGPKGDPGISGIPGSPGLPGPKGSVGGM 1078

Query: 254  GINGVPG 260
            G+ G PG
Sbjct: 1079 GLPGTPG 1085



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 90/176 (51%), Gaps = 26/176 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVG-P--PGPQGIPGDEGKRGP 162
            PG  GP G  G  G  G  G+ G +G        G PG  G P  PGPQG PG  G++G 
Sbjct: 1048 PGQPGPKGDPGISGIPGSPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGAPGLPGEKGA 1107

Query: 163  KGDMGYPGPQ--GIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGRN 214
            KG+ G  GP   GIPG  G +G +G  G+PG  G  G        G+PG PGL G PG  
Sbjct: 1108 KGEKGQAGPPGIGIPGLPGVKGDQGIAGFPGSPGEKGEKGSIGIPGVPGSPGLKGSPGSV 1167

Query: 215  GMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGT 261
            G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G +G+PG+
Sbjct: 1168 GYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGS 1223



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 96/220 (43%), Gaps = 38/220 (17%)

Query: 44   KGDIFDNSVPQTPHVEFVP--------PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIP 95
            KG +    +P TP  + VP        P L  E   + ++ Q                 P
Sbjct: 1072 KGSVGGMGLPGTPGEKGVPGIPGPQGAPGLPGEKGAKGEKGQAGP--------------P 1117

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
             + + G      +    G  G  G+KGE G+ G  GV G  G KG+PG VG PG  G+PG
Sbjct: 1118 GIGIPGLPGVKGDQGIAGFPGSPGEKGEKGSIGIPGVPGSPGLKGSPGSVGYPGSPGLPG 1177

Query: 156  DEGKRG-------P--KGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            ++G +G       P  KG+ G PG   P G     G++G  G  G PG  G  G  GLPG
Sbjct: 1178 EKGDKGLPGLDGIPGVKGEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPG 1234

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
              G  G PG  G  G  G+ G PG  G PG  G  GE+G 
Sbjct: 1235 R-GFPGFPGAKGDKGSKGEVGFPGLAGSPGIPGAKGEQGF 1273



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 76/159 (47%), Gaps = 23/159 (14%)

Query: 128  GEMGVKGERGEKGAPGV--VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            G  G+KGE+G  G PG+   GP G +G  G  G  G  G  G PG QG PG  G  G KG
Sbjct: 882  GPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGLPGLPGQQGTPGVPGFPGSKG 941

Query: 186  DM------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP------GKDGLPGKDG--- 230
            +M      G PG  G  G  GLPGE G  G PG +G  G P      G  GLPGK G   
Sbjct: 942  EMGVMGTPGQPGSPGPVGSPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDAGLPGKPGSMD 1001

Query: 231  ------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                  + G  G  GEKG  GP G +G  G  G PG P 
Sbjct: 1002 KVDMENMKGEKGDQGEKGQIGPIGEKGSRGDPGSPGVPG 1040



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 82/162 (50%), Gaps = 27/162 (16%)

Query: 111 PPGL--QGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQGIPGDEGKRGPK 163
           PPG+  Q  + +KG+   KGE G KGE G +G PGV      G PGP+G PG +G +G K
Sbjct: 301 PPGVPGQAQVQEKGDYATKGEKGQKGEPGFQGMPGVGEKGDPGKPGPRGKPGKDGDKGEK 360

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGEPGLDGIP 211
           G  G+PG  G PG  G++GP+G+ G              G +G  G  G PG PG  G P
Sbjct: 361 GSPGFPGDPGYPGLVGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEP 420

Query: 212 GRNGMDGIPGKDGLP--------GKDGIPGTNGTNGEKGMTG 245
           G  G  GI G+ G P        G  G PG  G  GE+G  G
Sbjct: 421 GPKGFPGIQGQPGPPGLPVPGQIGAPGFPGERGEKGERGFPG 462



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 99/252 (39%), Gaps = 88/252 (34%)

Query: 97   VAMQGFCNSTKEYCPPGLQG---------------------------------------- 116
            V + G         PPGLQG                                        
Sbjct: 822  VGVPGVPGERGAIGPPGLQGVRGDPGPPGLPGPMGSPGVPGIGPPGARGPPGGQGPAGLA 881

Query: 117  -PIGQKGEIGAKGEMGV-----KGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKG 164
             P G KGE G  G  G+     KG++G +G PG+ G       PG QG PG  G  G KG
Sbjct: 882  GPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGLPGLPGQQGTPGVPGFPGSKG 941

Query: 165  DMGY---------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            +MG          PGP G PG  G+   KGD G+PG  G  G  GL G+ G  G+PG+ G
Sbjct: 942  EMGVMGTPGQPGSPGPVGSPGLPGE---KGDHGFPGSSGPRGDPGLKGDKGDAGLPGKPG 998

Query: 216  -MD-----------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             MD                       G  G  G PG  G+PG +G  G+ G  GP+G+ G
Sbjct: 999  SMDKVDMENMKGEKGDQGEKGQIGPIGEKGSRGDPGSPGVPGKDGQAGQPGQPGPKGDPG 1058

Query: 252  KSGINGVPGTPA 263
             SGI G PG P 
Sbjct: 1059 ISGIPGSPGLPG 1070



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 87/192 (45%), Gaps = 44/192 (22%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP GQKGE G+ G  G  GE+GE G PG   P    G PG +G +G KG++G+PG 
Sbjct: 1203 PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGFPGL 1258

Query: 172  QGIPGDEGKRGPKGDMGY------------PGRIGLDGRDG------------------- 200
             G PG  G +G +G MG             PG   ++G  G                   
Sbjct: 1259 AGSPGIPGAKGEQGFMGPPGPQGQPGLPGSPGHA-MEGPKGDRGPQGQPGLPGLPGPMGP 1317

Query: 201  -----LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGK 252
                 + G  G  G PG  G  G+PG  G PG  G+PG  G+    G KG  GP G +G 
Sbjct: 1318 PGLPGIDGIKGDKGHPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGIQGF 1377

Query: 253  SGINGVPGTPAI 264
             G  G+PG   I
Sbjct: 1378 QGAKGLPGLQGI 1389



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 65/138 (47%), Gaps = 34/138 (24%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 706 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGTMGQPGIGFPGPPGPKGVDGL 765

Query: 184 KGDM------------GYPGRIGLDGRDGLPGE--PGLDGIPGRNGMDGIPGKDGLPGKD 229
            GDM            G PG  G+ G+ G PG   PGL G+PG  G+ G PG+ G  G  
Sbjct: 766 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGIPGIPGAPGEKGSVGVP 825

Query: 230 GIPGTNGTNGEKGMTGPR 247
           G+PG  G  G  G+ G R
Sbjct: 826 GVPGERGAIGPPGLQGVR 843



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 58/123 (47%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           EIG  G+ G KG+RG  G  G+ G PGPQG PG  G+ G KG+                 
Sbjct: 549 EIGFPGQPGAKGDRGLPGRDGLAGVPGPQGTPGLIGQPGAKGE----------------- 591

Query: 183 PKGDMGYPGRIGLD----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                  PG I  D    G  G PG PG  G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 592 -------PGEIYFDLRLKGDKGDPGFPGQPGVPGRAGSPGRDGHPGLPGPKGSPGSVGLK 644

Query: 239 GEK 241
           GE+
Sbjct: 645 GER 647



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 90/201 (44%), Gaps = 57/201 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------------- 156
           GL G  G  G  G KG +GV G  GE+GA   +GPPG QG+ GD                
Sbjct: 805 GLPGIPGIPGAPGEKGSVGVPGVPGERGA---IGPPGLQGVRGDPGPPGLPGPMGSPGVP 861

Query: 157 -------------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
                               G  G KG+ G+P   G PG +   GPKGD G  G  G+ G
Sbjct: 862 GIGPPGARGPPGGQGPAGLAGPPGIKGEKGFP---GFPGLD-MPGPKGDKGAQGLPGITG 917

Query: 198 RDGLPGEPGLDGIP---------GRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTG 245
           + GLPG PG  G P         G  G+ G PG+ G P   G  G+PG  G +G  G +G
Sbjct: 918 QSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPVGSPGLPGEKGDHGFPGSSG 977

Query: 246 PRGN---RGKSGINGVPGTPA 263
           PRG+   +G  G  G+PG P 
Sbjct: 978 PRGDPGLKGDKGDAGLPGKPG 998



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 64/130 (49%), Gaps = 27/130 (20%)

Query: 157 EGKRGPKGDMGYPGPQGIPGD-----------EGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           +G +G KGD G  GP G+PG            +G++G KG+ G+ G  G+ G  G PG+P
Sbjct: 287 QGPKGDKGDQGVSGPPGVPGQAQVQEKGDYATKGEKGQKGEPGFQGMPGV-GEKGDPGKP 345

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKG------------MTGPRGNR 250
           G  G PG++G  G  G  G PG  G P   G  G  GEKG             TGP G +
Sbjct: 346 GPRGKPGKDGDKGEKGSPGFPGDPGYPGLVGRQGPQGEKGEAGPPGPPGIVIGTGPLGEK 405

Query: 251 GKSGINGVPG 260
           G+ G  G PG
Sbjct: 406 GERGYPGTPG 415


>gi|45361285|ref|NP_989220.1| collagen alpha-1(II) chain precursor [Xenopus (Silurana)
           tropicalis]
 gi|82202407|sp|Q6P4Z2.1|CO2A1_XENTR RecName: Full=Collagen alpha-1(II) chain; AltName: Full=Alpha-1
           type II collagen; Flags: Precursor
 gi|38648940|gb|AAH63191.1| collagen, type II, alpha 1 [Xenopus (Silurana) tropicalis]
          Length = 1492

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 86/145 (59%), Gaps = 12/145 (8%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPKGDMGYPGPQ 172
           GP+G KG+ G  G  G KGE G KG    +G  GPQG P   G+EGKRG +G+ G  GP 
Sbjct: 452 GPLGPKGQTGDPGVAGFKGEHGPKG---EIGSAGPQGAPGPAGEEGKRGARGEPGAAGPL 508

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG+   RG  G+ G+PG+ GL G  G PGE G+ G+ G  G +G PG+   PG+ G+P
Sbjct: 509 GPPGE---RGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGANGDPGR---PGEPGLP 562

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G  GP+G  G SG +G
Sbjct: 563 GARGLTGRPGDAGPQGKVGPSGASG 587



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 88/171 (51%), Gaps = 21/171 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRG 161
           E+ P G  G  G +G  G  GE G +G RGE GA G +GPPG +G PG+      +G  G
Sbjct: 471 EHGPKGEIGSAGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAG 530

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           PK   G PG +G+PG  G +G  GD G PG  GL G  GL G PG  G  G+ G  G  G
Sbjct: 531 PK---GAPGERGVPGLGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASG 587

Query: 222 KDGL------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +DG             PG  G PG  G NGE G  G +G  G  G+ G+PG
Sbjct: 588 EDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLLGAPGLRGLPG 638



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 91/193 (47%), Gaps = 36/193 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG  G  G+ G  GA+G  G +G RGE G PG  GP G  G PG +G  G KG  G PG 
Sbjct: 373 PGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGASGNPGTDGIPGAKGSSGAPGI 432

Query: 171 -----------------------PQGIPGD------EGKRGPKGDM------GYPGRIGL 195
                                  P+G  GD      +G+ GPKG++      G PG  G 
Sbjct: 433 AGAPGFPGPRGPPGPQGATGPLGPKGQTGDPGVAGFKGEHGPKGEIGSAGPQGAPGPAGE 492

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +G+ G  GEPG  G  G  G  G PG  G PG+DG+ G  G  GE+G+ G  G +G +G 
Sbjct: 493 EGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGANGD 552

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 553 PGRPGEPGLPGAR 565



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 85/175 (48%), Gaps = 30/175 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-------- 164
           G  G  G+KG +GA G  G+ G+ GE GA G  GP GP G  G++G  GP G        
Sbjct: 617 GEPGKAGEKGLLGAPGLRGLPGKDGETGAQGPNGPAGPAGERGEQGPPGPSGFQGLPGPP 676

Query: 165 ----------DMGYPGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGLD 208
                     D G PG  G PG     GP+G+ G+PG        GL G  GLPG PG D
Sbjct: 677 GSPGEGGKPGDQGVPGEAGAPG---LVGPRGERGFPGERGSSGPQGLQGPRGLPGTPGTD 733

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G  G  G PG  G+PG  G     G++GP+G+RG +G  G  G P 
Sbjct: 734 GPKGATGPSGPNGAQGPPGLQGMPGERGA---AGISGPKGDRGDTGEKGPEGAPG 785



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 82/176 (46%), Gaps = 18/176 (10%)

Query: 100 QGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           +GF        P GLQGP    G  G  G KG  G  G  G +G PG+ G PG +G  G 
Sbjct: 706 RGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGATGPSGPNGAQGPPGLQGMPGERGAAGI 765

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDGL 201
            G +G +GD G  GP+G PG +G RG                KG+ G  G  G+ G  G 
Sbjct: 766 SGPKGDRGDTGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGEKGESGPSGPAGIVGARGA 825

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PG+ G  G PG  G  G PG DG  G  G  G +G  G+ G  GP+G  G  G  G
Sbjct: 826 PGDRGETGPPGPAGFAGPPGADGQAGLKGDQGESGQKGDAGAPGPQGPSGAPGPQG 881



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 83/170 (48%), Gaps = 27/170 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP+G  GE GA G  G  G+    G KGAPG       +G+PG  G +G  GD G 
Sbjct: 502 PGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGE------RGVPGLGGPKGANGDPGR 555

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------------LPGEPGLDGIPGRNGM 216
           PG  G+PG  G  G  GD G  G++G  G  G              G+PG+ G PG  G 
Sbjct: 556 PGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGA 615

Query: 217 DGIPGKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G PGK       G PG  G+PG +G  G +G  GP G  G+ G  G PG
Sbjct: 616 NGEPGKAGEKGLLGAPGLRGLPGKDGETGAQGPNGPAGPAGERGEQGPPG 665



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 106/249 (42%), Gaps = 58/249 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGD---EGKRGPKGD- 165
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+   PGD   +GK GP G  
Sbjct: 527 GLAGPKGAPGERGVPGLGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAS 586

Query: 166 --------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
                               MG+PGP+G  G+ GK G KG +G PG  GL G+DG  G  
Sbjct: 587 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLLGAPGLRGLPGKDGETGAQ 646

Query: 206 GLDGIPG---RNGMDGIPGKDG---------------------LPGKDGIPGTNGTNGEK 241
           G +G  G     G  G PG  G                     +PG+ G PG  G  GE+
Sbjct: 647 GPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGER 706

Query: 242 GMTGPRGNRGKSGIN---GVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSS 298
           G  G RG+ G  G+    G+PGTP     K  +    PN        PP + G      +
Sbjct: 707 GFPGERGSSGPQGLQGPRGLPGTPGTDGPKGATGPSGPNGAQG----PPGLQGMPGERGA 762

Query: 299 SPIVVREGD 307
           + I   +GD
Sbjct: 763 AGISGPKGD 771



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 79/159 (49%), Gaps = 12/159 (7%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGDEG 158
           PPGLQG  G++G  G  G  G +G+ GEKG  G  G  G +G+             G++G
Sbjct: 750 PPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGEKG 809

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           + GP G  G  G +G PGD G+ GP G  G+ G  G DG+ GL G+ G  G  G  G  G
Sbjct: 810 ESGPSGPAGIVGARGAPGDRGETGPPGPAGFAGPPGADGQAGLKGDQGESGQKGDAGAPG 869

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G PG  G  G NG  G +G  GP G  G  G  G
Sbjct: 870 PQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAG 908



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 90/198 (45%), Gaps = 48/198 (24%)

Query: 96   LVAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PG 149
            +V  +G      E  PPG     GP G  G+ G KG+ G  G++G+ GAPG  GP   PG
Sbjct: 819  IVGARGAPGDRGETGPPGPAGFAGPPGADGQAGLKGDQGESGQKGDAGAPGPQGPSGAPG 878

Query: 150  PQ------GIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRGPK---G 185
            PQ      G  G  G +GP G  G+PG  G                PG  GK GPK   G
Sbjct: 879  PQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPSGAPGSAGKEGPKGARG 938

Query: 186  DMGYPGRI---GLDGRDGLPGEPGLDG---------------IPGRNGMDGIPGKDGLPG 227
            D G  GR    GL G  G+PGE G  G               + G+ G+ G+PG+ G  G
Sbjct: 939  DAGPTGRAGDPGLQGPAGVPGEKGESGEDGPSGPDGPPGPQGLSGQRGIVGLPGQRGERG 998

Query: 228  KDGIPGTNGTNGEKGMTG 245
              G+PG +G  G++G  G
Sbjct: 999  FPGLPGPSGEPGKQGGPG 1016



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 87/195 (44%), Gaps = 57/195 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPG---------VVGP---PGPQGIPG 155
           P G  GP G++G+ GA+GE G  G     GE+GAPG         + GP   PG +G+PG
Sbjct: 483 PQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPG 542

Query: 156 DEGKRGPKGDMGYPGPQGIPGD------------EGKRGPKGD----------------- 186
             G +G  GD G PG  G+PG             +GK GP G                  
Sbjct: 543 LGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARG 602

Query: 187 ----MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
               MG+PG  G +G  G  GE GL G PG           GLPGKDG  G  G NG  G
Sbjct: 603 QPGVMGFPGPKGANGEPGKAGEKGLLGAPGLR---------GLPGKDGETGAQGPNGPAG 653

Query: 243 MTGPRGNRGKSGING 257
             G RG +G  G +G
Sbjct: 654 PAGERGEQGPPGPSG 668



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 87/220 (39%), Gaps = 54/220 (24%)

Query: 89   NAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP 148
             A  +  L   QG      +   PG QGP G  G  G  G  G KG RG +G PG  G P
Sbjct: 845  GADGQAGLKGDQGESGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFP 904

Query: 149  GPQG---------------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            G  G                PG  GK GPKG  G  GP G  GD G +GP    G PG  
Sbjct: 905  GAAGRVGPPGPNGNPGPSGAPGSAGKEGPKGARGDAGPTGRAGDPGLQGP---AGVPGEK 961

Query: 194  GLDGRD------------GLPGEPGLDGIPGR---NGMDGIPGKDGLPGKDGIPGTN--- 235
            G  G D            GL G+ G+ G+PG+    G  G+PG  G PGK G PG+    
Sbjct: 962  GESGEDGPSGPDGPPGPQGLSGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGGPGSAGDR 1021

Query: 236  ------------------GTNGEKGMTGPRGNRGKSGING 257
                              G  G  G  GP G  G +GI G
Sbjct: 1022 GPPGPVGPPGLTGPAGEPGREGNAGSDGPPGRDGATGIKG 1061



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 94/236 (39%), Gaps = 69/236 (29%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK------------------GERG 137
           L  + G    T    P G  GP G++GE G  G  G +                  G  G
Sbjct: 633 LRGLPGKDGETGAQGPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPG 692

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           E GAPG+VGP G +G PG+ G  GP+G     GP+G+PG  G  GPKG        G  G
Sbjct: 693 EAGAPGLVGPRGERGFPGERGSSGPQG---LQGPRGLPGTPGTDGPKG------ATGPSG 743

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGK------------DGLPGKDG--------------- 230
            +G  G PGL G+PG  G  GI G             +G PGKDG               
Sbjct: 744 PNGAQGPPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGAPGKDGSRGLTGPIGPPGPSG 803

Query: 231 ---------------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
                          I G  G  G++G TGP G  G +G  G  G   +   + ES
Sbjct: 804 PNGEKGESGPSGPAGIVGARGAPGDRGETGPPGPAGFAGPPGADGQAGLKGDQGES 859



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 74/167 (44%), Gaps = 24/167 (14%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           +KGE G  G  G+ G RG  G  G  GPPGP G        GP G  G     G+ GD+G
Sbjct: 807 EKGESGPSGPAGIVGARGAPGDRGETGPPGPAGF------AGPPGADGQ---AGLKGDQG 857

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG--------- 230
           + G KGD G PG  G  G  G  G  G++G  G  G  G PG  G PG  G         
Sbjct: 858 ESGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNG 917

Query: 231 ------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
                  PG+ G  G KG  G  G  G++G  G+ G   +   K ES
Sbjct: 918 NPGPSGAPGSAGKEGPKGARGDAGPTGRAGDPGLQGPAGVPGEKGES 964



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 93/226 (41%), Gaps = 63/226 (27%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE---------------------MGVKGER 136
              +G    T     PGLQGP G  GE G  GE                     +G+ G+R
Sbjct: 935  GARGDAGPTGRAGDPGLQGPAGVPGEKGESGEDGPSGPDGPPGPQGLSGQRGIVGLPGQR 994

Query: 137  GEKGAPGVVGP---PGPQGIPGD------------------EGKRGPKGDMGYPGPQGIP 175
            GE+G PG+ GP   PG QG PG                    G+ G +G+ G  GP   P
Sbjct: 995  GERGFPGLPGPSGEPGKQGGPGSAGDRGPPGPVGPPGLTGPAGEPGREGNAGSDGP---P 1051

Query: 176  GDEGKRGPKGDMG---------------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G +G  G KGD G                PG +G  G+ G  GE G  G  G +G  G  
Sbjct: 1052 GRDGATGIKGDRGETGPLGAPGAPGAPGAPGPVGPTGKQGDRGESGPQGPLGPSGPAGA- 1110

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
               GLPG  G  G  G  GE G  G +G+RG +G+ G+PG P    
Sbjct: 1111 --RGLPGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGTAG 1154



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 53/124 (42%), Gaps = 22/124 (17%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
           G  G  GP G  G EG +GP+G+ G PG  G  G     G PG DGIPG  G  G PG  
Sbjct: 377 GSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAS---GNPGTDGIPGAKGSSGAPGIA 433

Query: 222 ----------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                             G  G  G  G  G  G KG  GP+G  G +G  G PG PA  
Sbjct: 434 GAPGFPGPRGPPGPQGATGPLGPKGQTGDPGVAGFKGEHGPKGEIGSAGPQGAPG-PAGE 492

Query: 266 AYKR 269
             KR
Sbjct: 493 EGKR 496


>gi|301766572|ref|XP_002918708.1| PREDICTED: hypothetical protein LOC100472350 [Ailuropoda
           melanoleuca]
          Length = 1298

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 67/114 (58%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGEMG  G  G  G  G  GPPGP G  G  G+RG  G+ G  G +G PG  G+RG  G 
Sbjct: 311 KGEMGPAGIPGAPGLIGARGPPGPAGTNGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGS 370

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +G+PG  G +GE
Sbjct: 371 PGIPGPKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGANGLPGEKGPSGE 424



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 87/198 (43%), Gaps = 57/198 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G+ G+ GAKGE G +GERGE G+PG+   PGP+G  G +G  G  G  G PG 
Sbjct: 341 PGQRGAAGEPGKNGAKGEPGPRGERGEAGSPGI---PGPKGEDGKDGSPGEPGANGLPGA 397

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLD------------------GRDGLPGEPGLD----- 208
            G  G  G RGP G  G PG  G                    GRDG+PG PG+      
Sbjct: 398 AGERGAPGFRGPAGANGLPGEKGPSGERGGPGPAGPRGAPGEPGRDGVPGGPGMRGSQGE 457

Query: 209 -------------------GIPGRNGMDGIPGKDG------------LPGKDGIPGTNGT 237
                              G PG  G DG PGK+G            LPG  G PG NG 
Sbjct: 458 SGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGLPGTSGPPGENGK 517

Query: 238 NGEKGMTGPRGNRGKSGI 255
            GE G +G  G RG  G 
Sbjct: 518 PGEPGDSGAPGERGPPGA 535



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/107 (45%), Positives = 56/107 (52%), Gaps = 6/107 (5%)

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGM 216
           +G  G  G PG  G+ G  G  GP G  G PG+    G  G++G  GEPG  G  G  G 
Sbjct: 311 KGEMGPAGIPGAPGLIGARGPPGPAGTNGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGS 370

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
            GIPG  G  GKDG PG  G NG  G  G RG    RG +G NG+PG
Sbjct: 371 PGIPGPKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGANGLPG 417



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 67/168 (39%), Gaps = 45/168 (26%)

Query: 146 GPPGPQGIPGDEGKRG------------------PKGDMGYPGPQGIPGDEGKRGP---- 183
           G PGP GI G  G RG                   KG+ G PGP G  G+ G  GP    
Sbjct: 792 GAPGPLGIAGITGARGLAGPPGIPGPRGSPGPQGVKGESGKPGPAGHNGERGPPGPQGLP 851

Query: 184 --KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP--------------------- 220
              G  G PGR G  G DGLPG  G  G  G  G +G P                     
Sbjct: 852 GLAGTAGEPGRDGNPGSDGLPGRDGAPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKN 911

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G  G  G  G  GE+G TG +G+RG  G  G PG+P    ++
Sbjct: 912 GDRGETGPQGPRGDKGETGERGSTGIKGHRGFPGNPGAPGSPGPAGHQ 959


>gi|125829706|ref|XP_696164.2| PREDICTED: collagen alpha-2(VI) chain [Danio rerio]
          Length = 1015

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/144 (47%), Positives = 81/144 (56%), Gaps = 6/144 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GQKG  G  G  G+KGERG  G PG+ GP   PGP+G PG +G++G  G  G  G  GI 
Sbjct: 259 GQKGAKGDNGGAGLKGERGRPGDPGIEGPIGHPGPKGEPGLKGEKGEIGAQGKKGVAGIA 318

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G +GK G KG     GRIG  G  G PG+ G DG PG  G  G+PG  G  G  G PG +
Sbjct: 319 GRDGKDGQKGKF---GRIGAPGCKGDPGDKGPDGHPGDVGEPGLPGALGDKGDRGRPGRS 375

Query: 236 GTNGEKGMTGPRGNRGKSGINGVP 259
           G  G  G  GP+G RG  G  G+P
Sbjct: 376 GPPGPAGDPGPKGERGSPGSPGIP 399



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 89/177 (50%), Gaps = 27/177 (15%)

Query: 112 PGLQGPIG------------QKGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQGI 153
           PG++GPIG            +KGEIGA+G+ GV G      + G+KG  G +G PG +G 
Sbjct: 282 PGIEGPIGHPGPKGEPGLKGEKGEIGAQGKKGVAGIAGRDGKDGQKGKFGRIGAPGCKGD 341

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP-- 211
           PGD+G  G  GD+G PG  G  GD+G RG  G  G PG  G  G  G  G PG  GIP  
Sbjct: 342 PGDKGPDGHPGDVGEPGLPGALGDKGDRGRPGRSGPPGPAGDPGPKGERGSPGSPGIPGT 401

Query: 212 -------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                  G  G  G  G+ G  G  G  G NG  GEKG  G  G RG +G  G  G+
Sbjct: 402 KGGAGTAGGPGPKGDAGRRGDFGPKGSTGPNGAKGEKGEPGAEGPRGLAGEVGGKGS 458



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 81/225 (36%), Gaps = 77/225 (34%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEK---GAPGVVGPPGPQGIPGDEGKRGPKG----- 164
           G  G  GQKG+ G  G  G KG+ G+K   G PG VG PG  G  GD+G RG  G     
Sbjct: 319 GRDGKDGQKGKFGRIGAPGCKGDPGDKGPDGHPGDVGEPGLPGALGDKGDRGRPGRSGPP 378

Query: 165 ----------DMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRD 199
                     + G PG  GIP               GD G+RG  G  G  G  G  G  
Sbjct: 379 GPAGDPGPKGERGSPGSPGIPGTKGGAGTAGGPGPKGDAGRRGDFGPKGSTGPNGAKGEK 438

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKD---------------GLPGKDGIPGT---------- 234
           G PG  G  G+ G  G  G  G +               G  G  G PG           
Sbjct: 439 GEPGAEGPRGLAGEVGGKGSKGDNGLPGPRGPPGAPGDAGRKGSSGDPGDSGPRGDPGPP 498

Query: 235 -------------------NGTNGEKGMTGPRGNRGKSGINGVPG 260
                               G  GEKG  GPRG+RG  G  G PG
Sbjct: 499 GPKGDSGRPGFSYPGPRGPTGDRGEKGSPGPRGSRGDCGPKGDPG 543



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 62/149 (41%), Gaps = 50/149 (33%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
           +G  G++G+ G KG  G  G +GEKG PG  GP G  G  G                   
Sbjct: 414 KGDAGRRGDFGPKGSTGPNGAKGEKGEPGAEGPRGLAGEVGGKGSKGDNGLPGPRGPPGA 473

Query: 156 --DEGKRGPKGDMG-----------------------YPGPQGIPGDEGK------RGPK 184
             D G++G  GD G                       YPGP+G  GD G+      RG +
Sbjct: 474 PGDAGRKGSSGDPGDSGPRGDPGPPGPKGDSGRPGFSYPGPRGPTGDRGEKGSPGPRGSR 533

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           GD G  G  GL G  G PGEPG  G PG+
Sbjct: 534 GDCGPKGDPGLKGTPGEPGEPGPAGEPGQ 562



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 6/50 (12%)

Query: 112 PGLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           PG +GP G +GE G+      +G+ G KG+ G KG PG  G PGP G PG
Sbjct: 512 PGPRGPTGDRGEKGSPGPRGSRGDCGPKGDPGLKGTPGEPGEPGPAGEPG 561


>gi|62122588|dbj|BAD93256.1| COL11A2 [Oryzias latipes]
          Length = 1827

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 84/158 (53%), Gaps = 12/158 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGD 165
           PG QG  G +G IG  GE G  G+ G  G PG  GPPG      P G  G++G  GP+G 
Sbjct: 734 PGTQGMPGPQGAIGPHGEKGPTGKPGLPGMPGADGPPGHPGKEGPPGTKGNQGPNGPQGA 793

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +GYPGP+GI G +G RG KG  G        G DG PG  G  G+ G  G  G+PG  G 
Sbjct: 794 IGYPGPRGIKGAQGIRGLKGHKGE------KGEDGFPGIKGDFGVKGERGEAGLPGPRGE 847

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G +G  G  G  GE G  G  G +GK G+ G+PG P 
Sbjct: 848 DGPEGPKGRVGPPGEIGPIGTVGEKGKLGVPGLPGYPG 885



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/160 (44%), Positives = 85/160 (53%), Gaps = 15/160 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QG IG  G  G KG  G++G +G KG  G  G PG   I GD G +G +G+ G PG
Sbjct: 787 PNGPQGAIGYPGPRGIKGAQGIRGLKGHKGEKGEDGFPG---IKGDFGVKGERGEAGLPG 843

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIG---LDGRDGLPGEPGLDGIPGRNG------MDGIPG 221
           P+G   ++G  GPKG +G PG IG     G  G  G PGL G PGR G        G PG
Sbjct: 844 PRG---EDGPEGPKGRVGPPGEIGPIGTVGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPG 900

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            +G  G  G+ G  G  G++G TGPRG RG  G  G  G 
Sbjct: 901 SNGEKGTRGVSGKQGPRGQRGPTGPRGQRGPRGATGKAGA 940



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 96/218 (44%), Gaps = 69/218 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGP 162
           PG QGP G +G +G  G+ G +G  G  GA G+ G PG +G         +PGD+G RG 
Sbjct: 596 PGPQGPRGPQGVMGPPGKSGRRGRAGADGARGMPGEPGTKGDRGFDGLPGLPGDKGHRGD 655

Query: 163 KGDMGYP---------------GPQGIPGDEGKR------------------------GP 183
            G +G P               GP+G+PG+ G R                        GP
Sbjct: 656 SGPLGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGPPGVRGNDGPHGP 715

Query: 184 KGDM------------------GYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG++                  G P   G IG  G  G  G+PGL G+PG +G  G PGK
Sbjct: 716 KGNLGPQGEPGPPGQQGTPGTQGMPGPQGAIGPHGEKGPTGKPGLPGMPGADGPPGHPGK 775

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G PG  G  G NG  G  G  GPRG +G  GI G+ G
Sbjct: 776 EGPPGTKGNQGPNGPQGAIGYPGPRGIKGAQGIRGLKG 813



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 88/194 (45%), Gaps = 45/194 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+G  G  G KGE G  G +G +G  GV+GPPG             +G+PG+ G  
Sbjct: 576 GRPGPLGNPGSPGLKGEGGDPGPQGPRGPQGVMGPPGKSGRRGRAGADGARGMPGEPGT- 634

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-- 218
             KGD G+ G  G+PGD+G RG  G +G PG  G DG  G  G+ G  G+PG  G  G  
Sbjct: 635 --KGDRGFDGLPGLPGDKGHRGDSGPLGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLL 692

Query: 219 -------------IPGKDGLPGKDG---------------IPGTNGTNGEKGMTGPRGNR 250
                        + G DG  G  G                PGT G  G +G  GP G +
Sbjct: 693 GPKGPPGIAGPPGVRGNDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGAIGPHGEK 752

Query: 251 GKSGINGVPGTPAI 264
           G +G  G+PG P  
Sbjct: 753 GPTGKPGLPGMPGA 766



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 68/128 (53%), Gaps = 6/128 (4%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +G  G  G  G PGP G PG  G +G  GD   PGPQG  G +G  GP G  G  GR G 
Sbjct: 566 KGPPGPMGFTGRPGPLGNPGSPGLKGEGGD---PGPQGPRGPQGVMGPPGKSGRRGRAGA 622

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           DG  G+PGEPG  G  G +G+ G+PG  G  G  G  G  G+ GE G    RG+ G  G 
Sbjct: 623 DGARGMPGEPGTKGDRGFDGLPGLPGDKGHRGDSGPLGPPGSQGEDGE---RGDDGDVGP 679

Query: 256 NGVPGTPA 263
            G+PG P 
Sbjct: 680 RGLPGEPG 687



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 92/204 (45%), Gaps = 45/204 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQG------------- 152
           PGL G  G +G+ G  G  G +GE GE+G  G VGP      PGP+G             
Sbjct: 644 PGLPGDKGHRGDSGPLGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGP 703

Query: 153 --IPGDEGKRGPKGDM------------------GYPGPQGIPGDEGKRGPKGDMGYPGR 192
             + G++G  GPKG++                  G PGPQG  G  G++GP G  G PG 
Sbjct: 704 PGVRGNDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGAIGPHGEKGPTGKPGLPGM 763

Query: 193 IGLDGRDGLPGE---PGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G DG  G PG+   PG  G  G NG  G    PG  G+ G  GI G  G  GEKG  G 
Sbjct: 764 PGADGPPGHPGKEGPPGTKGNQGPNGPQGAIGYPGPRGIKGAQGIRGLKGHKGEKGEDGF 823

Query: 247 RGNRGKSGINGVPGTPAICAYKRE 270
            G +G  G+ G  G   +   + E
Sbjct: 824 PGIKGDFGVKGERGEAGLPGPRGE 847



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 81/177 (45%), Gaps = 39/177 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------------GPQGIPG 155
            P G  G  G  GE+G +G+ G KGERGE G  G  G P               GP G  G
Sbjct: 1345 PVGFPGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSPGPPGENGPPGPLGKRGPAGTRG 1404

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             EG++G KG  G PG  G PG   K GP G  G PG+ G +G  GLPG  G  G PG  G
Sbjct: 1405 PEGRQGEKGTKGDPGAVGPPG---KTGPVGPQGQPGKPGTEGLRGLPGSVGEQGSPGAAG 1461

Query: 216  ---------------MDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRG 251
                           + G PG  G  G  G+      PG  G  G++G+ GP+G+ G
Sbjct: 1462 QKGPPGPVGPAGLPGLRGDPGAKGEKGHQGLIGLVGAPGEQGEKGDRGLPGPQGSTG 1518



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 81/179 (45%), Gaps = 39/179 (21%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---------------GPPGPQG 152
            E   PG  GP G  GE G KG  G +GE+GE G PG                 G PGP G
Sbjct: 1288 EKGEPGESGPPGVVGEPGKKGPRGERGEKGEAGQPGTPGPAGGRGRPGDDGPKGNPGPVG 1347

Query: 153  IPGDE---GKRGPKGDMGYPGPQGIPGDEG------------------KRGPKGDMGYPG 191
             PGD    G+ GP+G  G  G +G  G++G                  KRGP G  G  G
Sbjct: 1348 FPGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSPGPPGENGPPGPLGKRGPAGTRGPEG 1407

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            R    G  G  G+PG  G PG+ G  G  G+ G PG +G+ G  G+ GE+G  G  G +
Sbjct: 1408 R---QGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGSPGAAGQK 1463



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 86/216 (39%), Gaps = 48/216 (22%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA-------------- 141
           L   +G    +    PPG QG  G++G+ G  G  G+ GE G +G               
Sbjct: 646 LPGDKGHRGDSGPLGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGPPG 705

Query: 142 ----PGVVGP------------------PGPQGIPGDEGKRGPKGDM---------GYPG 170
                G  GP                  PG QG+PG +G  GP G+          G PG
Sbjct: 706 VRGNDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGAIGPHGEKGPTGKPGLPGMPG 765

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPG 227
             G PG  GK GP G  G  G  G  G  G PG  G+    GI G  G  G  G+DG PG
Sbjct: 766 ADGPPGHPGKEGPPGTKGNQGPNGPQGAIGYPGPRGIKGAQGIRGLKGHKGEKGEDGFPG 825

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G  GE G+ GPRG  G  G  G  G P 
Sbjct: 826 IKGDFGVKGERGEAGLPGPRGEDGPEGPKGRVGPPG 861



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 70/128 (54%), Gaps = 9/128 (7%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPP------GPQGIPGDEGKRGPKGDMGYPGPQG 173
            ++G  G +G  G +GE+G KG PG VGPP      GPQG PG  G  G +G  G  G QG
Sbjct: 1396 KRGPAGTRGPEGRQGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQG 1455

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             PG  G++GP G +G  G  GL G  G  GE G  G+    G+ G PG+ G  G  G+PG
Sbjct: 1456 SPGAAGQKGPPGPVGPAGLPGLRGDPGAKGEKGHQGL---IGLVGAPGEQGEKGDRGLPG 1512

Query: 234  TNGTNGEK 241
              G+ G K
Sbjct: 1513 PQGSTGAK 1520



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 80/208 (38%), Gaps = 67/208 (32%)

Query: 132 VKGERGEKGAPGVVGPPGPQGI--------------------------PGDEGKRGPKGD 165
           V+ ++GEKG P ++ P    G+                           GD G+RGP G 
Sbjct: 458 VRSQKGEKGEPAILEP----GMLIDGPPGPEGPAGPTGPPGPSGPPGSVGDPGERGPPGR 513

Query: 166 MGYPGPQGIPGDEGK-------------------------------------RGPKGDMG 188
            G PG  G+PG  G                                      +GP G MG
Sbjct: 514 AGLPGADGVPGPPGTSVMLPFRFGQSGGDKGPVVSAQEAQAAAILSQARMALKGPPGPMG 573

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           + GR G  G  G PG  G  G PG  G  G  G  G PGK G  G  G +G +GM G  G
Sbjct: 574 FTGRPGPLGNPGSPGLKGEGGDPGPQGPRGPQGVMGPPGKSGRRGRAGADGARGMPGEPG 633

Query: 249 NRGKSGINGVPGTPAICAYKRESCSLLP 276
            +G  G +G+PG P    ++ +S  L P
Sbjct: 634 TKGDRGFDGLPGLPGDKGHRGDSGPLGP 661



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 67/171 (39%), Gaps = 42/171 (24%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------------------MGYPGPQGI 174
            KGE GE G PGVVG PG +G  G+ G++G  G                    G PGP G 
Sbjct: 1289 KGEPGESGPPGVVGEPGKKGPRGERGEKGEAGQPGTPGPAGGRGRPGDDGPKGNPGPVGF 1348

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------------------------GLDGI 210
            PGD G  G  G  G  G  G  G DG  GE                         G +G 
Sbjct: 1349 PGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSPGPPGENGPPGPLGKRGPAGTRGPEGR 1408

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G PG  G PGK G  G  G  G+ G  G RG  G  G  G PG 
Sbjct: 1409 QGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGSPGA 1459



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 79/218 (36%), Gaps = 75/218 (34%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------------- 162
            G+ G  G +G  G KG+ G +G PG  GP G QG+PG  G++G                 
Sbjct: 1203 GELGPRGQQGPFGAKGDEGSRGFPGAPGPIGLQGLPGPSGEKGETGDVGPLGPPGPPGPR 1262

Query: 163  --------------------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                                      KG+ G  GP G+ G+ GK+GP+G+ G  G  G  
Sbjct: 1263 GPAGPNGADGPQGPPGGLGNPGPIGEKGEPGESGPPGVVGEPGKKGPRGERGEKGEAGQP 1322

Query: 197  G---------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG----- 236
            G                 G PG  G  G PG  G  G  G+DG  G+ G  G  G     
Sbjct: 1323 GTPGPAGGRGRPGDDGPKGNPGPVGFPGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSP 1382

Query: 237  -------------TNGEKGMTGPRGNRGKSGINGVPGT 261
                           G  G  GP G +G+ G  G PG 
Sbjct: 1383 GPPGENGPPGPLGKRGPAGTRGPEGRQGEKGTKGDPGA 1420



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 58/133 (43%), Gaps = 51/133 (38%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGV------------VGPPGP------- 150
           GL+G  G+KGE    G KG+ GVKGERGE G PG             VGPPG        
Sbjct: 810 GLKGHKGEKGEDGFPGIKGDFGVKGERGEAGLPGPRGEDGPEGPKGRVGPPGEIGPIGTV 869

Query: 151 --------QGIPGDEGKRGPKGDMGYPG---------------------PQGIPGDEGKR 181
                    G+PG  G++GPKG +G+PG                      +G  G  G+R
Sbjct: 870 GEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGSNGEKGTRGVSGKQGPRGQRGPTGPRGQR 929

Query: 182 GPKGDMGYPGRIG 194
           GP+G  G  G  G
Sbjct: 930 GPRGATGKAGAKG 942



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 86/257 (33%), Gaps = 98/257 (38%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------------------- 156
            GP GQ+G  GAKG+ G +G  G  G  G+ G PGP G  G+                   
Sbjct: 1206 GPRGQQGPFGAKGDEGSRGFPGAPGPIGLQGLPGPSGEKGETGDVGPLGPPGPPGPRGPA 1265

Query: 157  --------------------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                                       G+ GP G +G PG +   G  G+RG KG+ G P
Sbjct: 1266 GPNGADGPQGPPGGLGNPGPIGEKGEPGESGPPGVVGEPGKK---GPRGERGEKGEAGQP 1322

Query: 191  GRI---------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK------- 228
            G                 G  G  G PG+PG  G  G  G DG  G+ G  G+       
Sbjct: 1323 GTPGPAGGRGRPGDDGPKGNPGPVGFPGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSP 1382

Query: 229  -----------------------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                                   +G  G  GT G+ G  GP G  G  G  G PG P   
Sbjct: 1383 GPPGENGPPGPLGKRGPAGTRGPEGRQGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGT- 1441

Query: 266  AYKRESCSLLPNSETSQ 282
                E    LP S   Q
Sbjct: 1442 ----EGLRGLPGSVGEQ 1454


>gi|395519435|ref|XP_003775325.1| PREDICTED: LOW QUALITY PROTEIN: macrophage receptor MARCO-like
           [Sarcophilus harrisii]
          Length = 389

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 95/185 (51%), Gaps = 36/185 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG++G  G  G  G  G+ G KG  G +GA G+ GP G +GI GD G  GP+G+ G  G 
Sbjct: 72  PGVKGEKGTSGRDGIPGQPGTKGSPGSQGAAGIAGPRGEKGIKGDNGPTGPRGEAGAKGD 131

Query: 172 ---QGIPGDEGKRGPKGDMGY---------------PGRIGLDGR---DGLPGEPGLDGI 210
              QG  G +G+ G KGD+G                PG+ G++G     G PG+PG  G+
Sbjct: 132 KGDQGFTGSKGEMGQKGDVGMIGPPGLRGLQGVAGEPGKTGMNGSPGPKGEPGQPGAKGV 191

Query: 211 PGRNGMDGIPGKDGLPGKD---------------GIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  G+ GIPG  G PGK+               G+PG  G  G+ G  G +G +G++G+
Sbjct: 192 AGVPGLAGIPGTKGEPGKNGPSGPPGPPGPSGLMGVPGVKGDKGDSGHQGQKGTKGEAGV 251

Query: 256 NGVPG 260
           +G PG
Sbjct: 252 SGPPG 256



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/194 (39%), Positives = 94/194 (48%), Gaps = 36/194 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------------QGIPGDEGKR 160
           G+ G  G KG  G++G  G+ G RGEKG  G  GP GP            QG  G +G+ 
Sbjct: 85  GIPGQPGTKGSPGSQGAAGIAGPRGEKGIKGDNGPTGPRGEAGAKGDKGDQGFTGSKGEM 144

Query: 161 GPKGDMGYPGP------QGIPGDEGKRG------PKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G KGD+G  GP      QG+ G+ GK G      PKG+ G PG  G+ G  GL G PG  
Sbjct: 145 GQKGDVGMIGPPGLRGLQGVAGEPGKTGMNGSPGPKGEPGQPGAKGVAGVPGLAGIPGTK 204

Query: 209 GIPGRN------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G PG+N            G+ G+PG  G  G  G  G  GT GE G++GP G +G  G  
Sbjct: 205 GEPGKNGPSGPPGPPGPSGLMGVPGVKGDKGDSGHQGQKGTKGEAGVSGPPGQKGAQGSM 264

Query: 257 GVPGTPAICAYKRE 270
           G  G P +   K E
Sbjct: 265 GNKGEPGLKGTKGE 278



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 61/125 (48%), Gaps = 10/125 (8%)

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLPGKDGIPG 233
           + G RG KGD G PG  G  G  GLPG PG+ G  G +G DGIPG+    G PG  G  G
Sbjct: 44  NAGFRGSKGDPGSPGPQGKKGDAGLPGLPGVKGEKGTSGRDGIPGQPGTKGSPGSQGAAG 103

Query: 234 TNGTNGEKGM---TGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIV 290
             G  GEKG+    GP G RG++G  G  G       K E    +       ++ PP + 
Sbjct: 104 IAGPRGEKGIKGDNGPTGPRGEAGAKGDKGDQGFTGSKGE----MGQKGDVGMIGPPGLR 159

Query: 291 GSEHI 295
           G + +
Sbjct: 160 GLQGV 164



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 71/149 (47%), Gaps = 30/149 (20%)

Query: 100 QGFCNSTKEYC---------PPGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
           QGF  S  E           PPGL   QG  G+ G+ G  G  G KGE G+ GA GV G 
Sbjct: 135 QGFTGSKGEMGQKGDVGMIGPPGLRGLQGVAGEPGKTGMNGSPGPKGEPGQPGAKGVAGV 194

Query: 148 PGPQGIPGDEGKRGPKGD------------MGYPGPQGIPGD---EGKRGPKGDMGY--- 189
           PG  GIPG +G+ G  G             MG PG +G  GD   +G++G KG+ G    
Sbjct: 195 PGLAGIPGTKGEPGKNGPSGPPGPPGPSGLMGVPGVKGDKGDSGHQGQKGTKGEAGVSGP 254

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           PG+ G  G  G  GEPGL G  G  G  G
Sbjct: 255 PGQKGAQGSMGNKGEPGLKGTKGEKGQQG 283



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 58/112 (51%), Gaps = 18/112 (16%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G +G PG  G +G KGD G P   G+PG +G++            G  GRDG+PG+PG  
Sbjct: 49  GSKGDPGSPGPQGKKGDAGLP---GLPGVKGEK------------GTSGRDGIPGQPGTK 93

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G  GI G     G+ GI G NG  G +G  G +G++G  G  G  G
Sbjct: 94  GSPGSQGAAGIAGPR---GEKGIKGDNGPTGPRGEAGAKGDKGDQGFTGSKG 142


>gi|383863475|ref|XP_003707206.1| PREDICTED: collagen alpha-1(IV) chain-like [Megachile rotundata]
          Length = 875

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 83/156 (53%), Gaps = 24/156 (15%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           ++G  G+ GE GAKGE G KGE G+ G PG   PPG  G PG  G  GPKG  G+PG   
Sbjct: 385 VKGSKGEPGERGAKGEQGQKGELGDAGYPG---PPGLDGKPGLPGFPGPKGATGFPG--- 438

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------------------NG 215
           +PG +G  GP+G++G PG  G  G  G PGEPG DG+PG                    G
Sbjct: 439 VPGSQGLPGPRGEIGAPGSPGSQGLKGEPGEPGRDGLPGSIVGSVIPGPPGAEGPPGIPG 498

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            DG+PG  G PG  G PG  G  GE G  G  G +G
Sbjct: 499 EDGLPGLKGEPGATGPPGVPGLRGETGSPGSPGLQG 534



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 90/184 (48%), Gaps = 29/184 (15%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QGF  +      PG +G IG  G  GAKGE G +G+ G  G  G  G PGP+G PG  G 
Sbjct: 297 QGFIGARGFPGNPGPKGSIGPIGPPGAKGERGERGDMGFPGLKGDQGLPGPRGYPGLSGP 356

Query: 160 RGP--------------------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            GP                          KG  G PG +G  G++G++G  GD GYPG  
Sbjct: 357 PGPPGNISDYRDVLPRFVGPPGPQGNPGVKGSKGEPGERGAKGEQGQKGELGDAGYPGPP 416

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           GLDG+ GLPG PG  G     G  G+PG  GLPG  G  G  G+ G +G+ G  G  G+ 
Sbjct: 417 GLDGKPGLPGFPGPKGA---TGFPGVPGSQGLPGPRGEIGAPGSPGSQGLKGEPGEPGRD 473

Query: 254 GING 257
           G+ G
Sbjct: 474 GLPG 477



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 84/208 (40%), Gaps = 53/208 (25%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           E G  G  G  G RG  G PG  G  GP G PG +G+RG +GDMG+PG   + GD+G  G
Sbjct: 290 EQGKTGPQGFIGARGFPGNPGPKGSIGPIGPPGAKGERGERGDMGFPG---LKGDQGLPG 346

Query: 183 P--------------------------------------KGDMGYPGRIGLDGRDGLPGE 204
           P                                      KG  G PG  G  G  G  GE
Sbjct: 347 PRGYPGLSGPPGPPGNISDYRDVLPRFVGPPGPQGNPGVKGSKGEPGERGAKGEQGQKGE 406

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G PG       PG DG PG  G PG  G  G  G+ G +G  G  G  G PG+P  
Sbjct: 407 LGDAGYPG------PPGLDGKPGLPGFPGPKGATGFPGVPGSQGLPGPRGEIGAPGSPGS 460

Query: 265 CAYKRESCSLLPNSETSQLLIPPTIVGS 292
              K E        E  +  +P +IVGS
Sbjct: 461 QGLKGEP------GEPGRDGLPGSIVGS 482



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 80/174 (45%), Gaps = 40/174 (22%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  G++G+KG  G  GP GP+G+PG        G  G PG  GIPG EG+ 
Sbjct: 555 GKPGPPGFDGKPGQKGDKGQQGEQGPIGPRGLPGS------TGSPGLPGSAGIPGIEGRP 608

Query: 182 GPK---------------GDM----------GYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           G                 GDM          G PG  G  G  G PG PG  G PG  G 
Sbjct: 609 GSPGPPGPPGPPGPAGSDGDMLSTNDILETIGSPGVSGPRGLPGTPGLPGERGPPGERGP 668

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           +G  G  G+PGKDG P         G+ GP G RG++G+ G+ G+P     + E
Sbjct: 669 EGKIGPPGMPGKDGAP---------GLQGPPGVRGQTGMPGLQGSPGRSITESE 713



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 88/236 (37%), Gaps = 88/236 (37%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGA------------------------------P 142
           GL GP G+ G  G+ G  G+KGE GE G                               P
Sbjct: 444 GLPGPRGEIGAPGSPGSQGLKGEPGEPGRDGLPGSIVGSVIPGPPGAEGPPGIPGEDGLP 503

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE---------------GKRGPKGDM 187
           G+ G PG  G PG  G RG  G  G PG QG+PG                 GK GP G  
Sbjct: 504 GLKGEPGATGPPGVPGLRGETGSPGSPGLQGLPGLAGEPGPPGPRGLEGLTGKPGPPGFD 563

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------------------ 229
           G PG+ G  G+ G  G  G  G+PG  G  G+PG  G+PG +                  
Sbjct: 564 GKPGQKGDKGQQGEQGPIGPRGLPGSTGSPGLPGSAGIPGIEGRPGSPGPPGPPGPPGPA 623

Query: 230 -------------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                                    G+PGT G  GE+G  G RG  GK G  G+PG
Sbjct: 624 GSDGDMLSTNDILETIGSPGVSGPRGLPGTPGLPGERGPPGERGPEGKIGPPGMPG 679



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 89/244 (36%), Gaps = 92/244 (37%)

Query: 106 TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE-------- 157
           T +  PPG  G  GQKG+ G +GE G  G RG  G+ G  G PG  GIPG E        
Sbjct: 554 TGKPGPPGFDGKPGQKGDKGQQGEQGPIGPRGLPGSTGSPGLPGSAGIPGIEGRPGSPGP 613

Query: 158 --------------------------GKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMG 188
                                     G  G  G  G PG  G+PG+ G   +RGP+G +G
Sbjct: 614 PGPPGPPGPAGSDGDMLSTNDILETIGSPGVSGPRGLPGTPGLPGERGPPGERGPEGKIG 673

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK-------------------------- 222
            PG  G DG  GL G PG+ G  G  G+ G PG+                          
Sbjct: 674 PPGMPGKDGAPGLQGPPGVRGQTGMPGLQGSPGRSITESEIRDICVSVLREQMTEMAALM 733

Query: 223 -----------------------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                                         GLPG+ G  G  G  G  G+ GP G++G+ 
Sbjct: 734 QGPPGPPGRGRPGRPGSPGPQGRPGDPGTPGLPGERGFVGLPGPQGPMGLQGPPGDQGEK 793

Query: 254 GING 257
           G  G
Sbjct: 794 GDRG 797



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 63/164 (38%), Gaps = 49/164 (29%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GV G RG  G PG+   PG +G PG+ G  G  G  G PG  G PG +G  G +G  
Sbjct: 640 GSPGVSGPRGLPGTPGL---PGERGPPGERGPEGKIGPPGMPGKDGAPGLQGPPGVRGQT 696

Query: 188 GYPGRIGLDGRD----------------------------------------------GL 201
           G PG  G  GR                                               G 
Sbjct: 697 GMPGLQGSPGRSITESEIRDICVSVLREQMTEMAALMQGPPGPPGRGRPGRPGSPGPQGR 756

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           PG+PG  G+PG  G  G+PG  G  G  G PG  G  G++G  G
Sbjct: 757 PGDPGTPGLPGERGFVGLPGPQGPMGLQGPPGDQGEKGDRGPEG 800


>gi|28703797|gb|AAH47305.1| COL4A1 protein, partial [Homo sapiens]
          Length = 1075

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 37/187 (19%)

Query: 112 PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           PG QG  G  G+ GAKGE        +G+ G RGEKG  G+ G       PG  G++G K
Sbjct: 437 PGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAG------FPGSPGEKGEK 490

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
           G +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIPG  G  G+PG  
Sbjct: 491 GSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTP 547

Query: 222 -------KDGLPGKDGIPGTNGTNGEKGMT-----------GPRGNRGKSGINGVPGTPA 263
                  + G PG DGIPG+ G  GE G+            G +G++G+ G  G+ G+P 
Sbjct: 548 GPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPG 607

Query: 264 ICAYKRE 270
           I   K E
Sbjct: 608 IPGSKGE 614



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 269 PGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPG---LPGE------KGDHGFPGS 319

Query: 172 QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
            G  GD G +G KGD+G PG+                        IG  G  G  G+PG 
Sbjct: 320 SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 379

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 380 PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 429



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 82/153 (53%), Gaps = 29/153 (18%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD   PG  G PG  
Sbjct: 354 GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD---PGISGTPGAP 410

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G  GPKG +G     G+    GLPG PG  G+PG      IPG  G PG   +PG  G  
Sbjct: 411 GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGSPG---LPGDKGAK 452

Query: 239 GEKGMTGP--------RGNRGKSGINGVPGTPA 263
           GEKG  GP        RG +G  GI G PG+P 
Sbjct: 453 GEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPG 485



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 91/172 (52%), Gaps = 28/172 (16%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
           GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 366 GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 425

Query: 167 ---------GYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP--- 211
                    G PGPQ   G+PGD+G +G KG  G PG IG+ G  G  G+ G+ G P   
Sbjct: 426 GTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSP 484

Query: 212 ---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  GIPG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG
Sbjct: 485 GEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 536



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 92/177 (51%), Gaps = 28/177 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVG-P--PGPQ---GIPGDEGK 159
           PG  GP G  G  G  G  G+ G +G        G PG  G P  PGPQ   G+PGD+G 
Sbjct: 392 PGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGA 451

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGR 213
           +G KG  G PG  GIPG  G++G +G  G+PG  G  G        G+PG PGL G PG 
Sbjct: 452 KGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGS 510

Query: 214 NGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGT 261
            G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G +G+PG+
Sbjct: 511 VGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGS 567



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 86/176 (48%), Gaps = 25/176 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL  P G KG+ GA+G  G+ G+ G  G PG  G PG  G PG +G+ G  G  G PG 
Sbjct: 240 PGLDMP-GPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGS 298

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD------------- 217
            G  G  G  G KGD G+PG  G  G  GL G+ G  G+PG+ G MD             
Sbjct: 299 PGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGD 358

Query: 218 ----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                     G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 359 QGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 414



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 75/143 (52%), Gaps = 16/143 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-------P--K 163
           G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG++G +G       P  K
Sbjct: 479 GFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVK 538

Query: 164 GDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG   P G     G++G  G  G PG  G  G  GLPG  G  G PG  G  G  
Sbjct: 539 GEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPGR-GFPGFPGAKGDKGSK 594

Query: 221 GKDGLPGKDGIPGTNGTNGEKGM 243
           G+ G PG  G PG  G+ GE+G 
Sbjct: 595 GEVGFPGLAGSPGIPGSKGEQGF 617



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 85/203 (41%), Gaps = 66/203 (32%)

Query: 112 PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP GQKGE G+    G     GE+GE G PG   P    G PG +G +G KG++G+
Sbjct: 547 PGPTGPAGQKGEPGSDGIPGSA---GEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGF 599

Query: 169 P---GPQGIPGDEGKR-----------------------GPKG----------------- 185
           P   G  GIPG +G++                       GPKG                 
Sbjct: 600 PGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPM 659

Query: 186 -------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                        D G PG  G  G  G  G+PG  G+PG  G  GI G  G  G  G+P
Sbjct: 660 GPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVP 719

Query: 233 GTNGTNGEKGMTGPRGNRGKSGI 255
           G  G  G  G+ G +G++G  G+
Sbjct: 720 GFQGPKGLPGLQGIKGDQGDHGV 742



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 79/185 (42%), Gaps = 43/185 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
           GL G  G  G  G KG +GV G  GE GA   +GPPG QGI G+ G              
Sbjct: 149 GLPGLPGIPGTPGEKGSIGVPGVPGEHGA---IGPPGLQGIRGEPGPPGLPGSVGSPGVP 205

Query: 160 -------------------------RGPKGDMGYPG--PQGIPGDEGKRGPKGDMGYPGR 192
                                    +G KG  G+PG    G  GD+G +G  G  G  G 
Sbjct: 206 GIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGL 265

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            GL G+ G PG PG  G  G  G+ G PG+ G PG  G PG  G  G+ G  G  G RG 
Sbjct: 266 PGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGD 325

Query: 253 SGING 257
            G+ G
Sbjct: 326 PGLKG 330



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 70/144 (48%), Gaps = 30/144 (20%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 50  LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 109

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGE 240
            GDMG PG  G  G +GLPG PG+ G  G  G+       GLPG     G+PG  GT GE
Sbjct: 110 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGV-------GLPGLKGLPGLPGIPGTPGE 162

Query: 241 KGMTGPRGNRGKSGINGVPGTPAI 264
           KG  G  G  G+ G  G PG   I
Sbjct: 163 KGSIGVPGVPGEHGAIGPPGLQGI 186


>gi|307181545|gb|EFN69107.1| Collagen alpha-1(I) chain [Camponotus floridanus]
          Length = 1490

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/148 (47%), Positives = 81/148 (54%), Gaps = 9/148 (6%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +G  G KG  G++G RGE G PG  G  GPQG  G +G  G KG  G  GP G+PG  
Sbjct: 400 GDQGSQGPKGSQGLQGPRGESGRPGQPGETGPQGAQGKDGSPGEKGATGAIGPVGLPGFP 459

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G RG  G+ G PG  G  G  GLPGE G  G  G  G  G+PG  GLP   G PG  G  
Sbjct: 460 GPRGQLGESGNPGIPGAKGASGLPGERGFKGDSGVKGDTGMPGPRGLP---GAPGNEGKR 516

Query: 239 GEKGM------TGPRGNRGKSGINGVPG 260
           G++GM      TGP G RG  G+ G+PG
Sbjct: 517 GKRGMRGPIGATGPPGERGAPGMRGLPG 544



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 96/194 (49%), Gaps = 42/194 (21%)

Query: 112 PGLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGV---VGPPGPQGI---PGDEGK 159
           PG  GP GQ GE G      AKG  G+ GERG KG  GV    G PGP+G+   PG+EGK
Sbjct: 456 PGFPGPRGQLGESGNPGIPGAKGASGLPGERGFKGDSGVKGDTGMPGPRGLPGAPGNEGK 515

Query: 160 R------------GPKGDMGYPGPQGIPGDEGKRGPK------------------GDMGY 189
           R            GP G+ G PG +G+PG +G  GP+                  GD+G 
Sbjct: 516 RGKRGMRGPIGATGPPGERGAPGMRGLPGPDGPVGPQGQIGDRGPVGAIGPKGAVGDLGR 575

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG  GL G  GL G PG  G PG  G  GI G DG  G+ G PG+ G  G  G  G RG 
Sbjct: 576 PGPPGLQGLRGLMGRPGASGKPGNPGERGIQGADGKSGEQGPPGSQGLPGPLGAPGERGY 635

Query: 250 RGKSGINGVPGTPA 263
            G+ G +G PG P 
Sbjct: 636 PGEPGKDGEPGNPG 649



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 92/180 (51%), Gaps = 12/180 (6%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQG 152
            L   +G+     E   PGL G  G+ G  G  G  G KG RGE GA   PG++GPP   G
Sbjct: 872  LKGDRGYPGLKGEQGNPGLSGSPGEAGSPGLIGLTGAKGIRGESGARGEPGLMGPP---G 928

Query: 153  IPGDEGKRGPKGDMGYPGPQGIP------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            IPG  G  G  G++G PG  G+P      GD G+ G  G +G PG  G+DG  G  G PG
Sbjct: 929  IPGHVGPAGSPGNIGSPGAPGLPGAKGDAGDLGRPGNPGPIGNPGLPGMDGNKGESGSPG 988

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
              G+ G  G  G+ G+ GLPG  G PG+ G  G  G  G  G  GK G  G PG+P +  
Sbjct: 989  PQGLDGLQGPQGLSGERGLPGLPGSPGSIGNRGLHGAPGETGQPGKPGTEGPPGSPGLVG 1048



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 113 GLQGP------IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           GLQGP       GQ GE G +G  G  G  GEKGA G +GP G  G PG  G+ G  G+ 
Sbjct: 412 GLQGPRGESGRPGQPGETGPQGAQGKDGSPGEKGATGAIGPVGLPGFPGPRGQLGESGNP 471

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG +G  G  G+RG KGD G  G  G+ G  GLPG PG +G  G+ GM G  G  G P
Sbjct: 472 GIPGAKGASGLPGERGFKGDSGVKGDTGMPGPRGLPGAPGNEGKRGKRGMRGPIGATGPP 531

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G+ G PG  G  G  G  GP+G  G  G  G 
Sbjct: 532 GERGAPGMRGLPGPDGPVGPQGQIGDRGPVGA 563



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 85/149 (57%), Gaps = 3/149 (2%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G++G+ G +G +G  G  GE+GAPG+ G PGP G  G +G+ G +G +G  GP
Sbjct: 507 PGAPGNEGKRGKRGMRGPIGATGPPGERGAPGMRGLPGPDGPVGPQGQIGDRGPVGAIGP 566

Query: 172 QGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           +G  GD G+ GP   +G  G  GR G  G+ G PGE G+ G  G++G  G PG  GLPG 
Sbjct: 567 KGAVGDLGRPGPPGLQGLRGLMGRPGASGKPGNPGERGIQGADGKSGEQGPPGSQGLPGP 626

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG  G  GE G  G  GN G  G  G
Sbjct: 627 LGAPGERGYPGEPGKDGEPGNPGSPGPRG 655



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 86/177 (48%), Gaps = 18/177 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
           PG++G  G  G  GAKGE GV GE+G  GAPG +GP GP G  G  G+RG +G  G P  
Sbjct: 309 PGIKGHRGFPGLDGAKGEQGVSGEKGSTGAPGPMGPIGPMGPAGPRGERGREGSSGPPGL 368

Query: 170 -GPQGIPGDEGKRGP---------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            GP GI G  G+ G                KGD G  G  G  G  G  GE G  G PG 
Sbjct: 369 RGPDGIIGPPGQPGAVGKPGPPGFPGIPGSKGDQGSQGPKGSQGLQGPRGESGRPGQPGE 428

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G  G  GKDG PG+ G  G  G  G  G  GPRG  G+SG  G+PG         E
Sbjct: 429 TGPQGAQGKDGSPGEKGATGAIGPVGLPGFPGPRGQLGESGNPGIPGAKGASGLPGE 485



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 94/199 (47%), Gaps = 51/199 (25%)

Query: 113 GLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------ 160
           G  GP+G KGE G +G        G+KGERG  GAPG++G PG +G+PG+ G++      
Sbjct: 736 GFPGPMGPKGETGTQGADGLTGLPGLKGERGSTGAPGLLGLPGARGLPGEPGQKGERGAL 795

Query: 161 ------------------------------------GPKGDMGYPGPQGIPGDEGKRGPK 184
                                               GP G +G PG  G PGD G +G +
Sbjct: 796 GPVGPEGPPGHIGERGLQGEIGPPGPPGEPAERGDPGPPGFIGEPGAAGKPGDTGPQGLQ 855

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G+PG+ GL    GLPG  G  G PG  G  G PG  G PG+ G PG  G  G KG+ 
Sbjct: 856 GLPGFPGQQGL---IGLPGLKGDRGYPGLKGEQGNPGLSGSPGEAGSPGLIGLTGAKGIR 912

Query: 245 GPRGNRGKSGINGVPGTPA 263
           G  G RG+ G+ G PG P 
Sbjct: 913 GESGARGEPGLMGPPGIPG 931



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 91/168 (54%), Gaps = 6/168 (3%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L  + GF         PGL+G  G  G  G +G  G+ G  GE G+PG++G  G +GI G
Sbjct: 854  LQGLPGFPGQQGLIGLPGLKGDRGYPGLKGEQGNPGLSGSPGEAGSPGLIGLTGAKGIRG 913

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            + G RG  G M   GP GIPG  G  G  G++G PG  GL G  G  G+ G  G PG  G
Sbjct: 914  ESGARGEPGLM---GPPGIPGHVGPAGSPGNIGSPGAPGLPGAKGDAGDLGRPGNPGPIG 970

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G+PG DG  G+ G PG  G +   G+ GP+G  G+ G+ G+PG+P 
Sbjct: 971  NPGLPGMDGNKGESGSPGPQGLD---GLQGPQGLSGERGLPGLPGSPG 1015



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 86/164 (52%), Gaps = 15/164 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP+G +G+IG +G +G  G +G  G  G  GPPG QG+ G  G+ G  G  G PG 
Sbjct: 543 PGPDGPVGPQGQIGDRGPVGAIGPKGAVGDLGRPGPPGLQGLRGLMGRPGASGKPGNPGE 602

Query: 172 QGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           +GI G +GK   +GP G  G PG +G  G  G PGEPG DG PG     G PG  G  GK
Sbjct: 603 RGIQGADGKSGEQGPPGSQGLPGPLGAPGERGYPGEPGKDGEPGN---PGSPGPRGDTGK 659

Query: 229 D---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           +         G  G +G  G  G  GPRG +G  G  G PG P 
Sbjct: 660 EGPPGIQGPPGPAGNDGARGSPGSVGPRGFQGVPGATGNPGVPG 703



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 93/200 (46%), Gaps = 51/200 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGY 168
           PG +G  G  G +G  G  G +G+ GE G PG+ G  G  G+PG+ G +G    KGD G 
Sbjct: 441 PGEKGATGAIGPVGLPGFPGPRGQLGESGNPGIPGAKGASGLPGERGFKGDSGVKGDTGM 500

Query: 169 PGPQGI---PGDEGKR------------GPKGDMGYPGRIGLDGRD-------------- 199
           PGP+G+   PG+EGKR            GP G+ G PG  GL G D              
Sbjct: 501 PGPRGLPGAPGNEGKRGKRGMRGPIGATGPPGERGAPGMRGLPGPDGPVGPQGQIGDRGP 560

Query: 200 -------------GLPGEPGLDGI------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                        G PG PGL G+      PG +G  G PG+ G+ G DG  G  G  G 
Sbjct: 561 VGAIGPKGAVGDLGRPGPPGLQGLRGLMGRPGASGKPGNPGERGIQGADGKSGEQGPPGS 620

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           +G+ GP G  G+ G  G PG
Sbjct: 621 QGLPGPLGAPGERGYPGEPG 640



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 97/216 (44%), Gaps = 30/216 (13%)

Query: 83  NPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA- 141
            P   +     +  +  +G         PPGLQG  G  G  GA G+ G  GERG +GA 
Sbjct: 550 GPQGQIGDRGPVGAIGPKGAVGDLGRPGPPGLQGLRGLMGRPGASGKPGNPGERGIQGAD 609

Query: 142 --PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---- 195
              G  GPPG QG+PG  G  G +G  G PG  G PG+ G  GP+GD G  G  G+    
Sbjct: 610 GKSGEQGPPGSQGLPGPLGAPGERGYPGEPGKDGEPGNPGSPGPRGDTGKEGPPGIQGPP 669

Query: 196 -----DGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLP---------------GKDGIP 232
                DG  G PG     G  G+PG  G  G+PGKDG                 G+ GIP
Sbjct: 670 GPAGNDGARGSPGSVGPRGFQGVPGATGNPGVPGKDGEAGIQGPPGSPGPIGNRGERGIP 729

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G  G  GP+G  G  G +G+ G P +   +
Sbjct: 730 GERGFMGFPGPMGPKGETGTQGADGLTGLPGLKGER 765



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 93/211 (44%), Gaps = 45/211 (21%)

Query: 113 GLQGPIGQKGEIGAK------------GEMGVK------------GERGEKGAPGVVGPP 148
           GL G  GQKGE GA             GE G++             ERG+ G PG +G P
Sbjct: 781 GLPGEPGQKGERGALGPVGPEGPPGHIGERGLQGEIGPPGPPGEPAERGDPGPPGFIGEP 840

Query: 149 GPQGIPGDEGKRG----P--------------KGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G PGD G +G    P              KGD GYPG +G  G+ G  G  G+ G P
Sbjct: 841 GAAGKPGDTGPQGLQGLPGFPGQQGLIGLPGLKGDRGYPGLKGEQGNPGLSGSPGEAGSP 900

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLPGKDGIPGTNGTNGEKGMTGPR 247
           G IGL G  G+ GE G  G PG  G  GIPG     G PG  G PG  G  G KG  G  
Sbjct: 901 GLIGLTGAKGIRGESGARGEPGLMGPPGIPGHVGPAGSPGNIGSPGAPGLPGAKGDAGDL 960

Query: 248 GNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
           G  G  G  G PG P +   K ES S  P  
Sbjct: 961 GRPGNPGPIGNPGLPGMDGNKGESGSPGPQG 991



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 80/169 (47%), Gaps = 27/169 (15%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKG---EIGAKGEMG------VKGERGEKGAPGVVGPPGPQ 151
            G   S  E   PGL G  G KG   E GA+GE G      + G  G  G+PG +G PG  
Sbjct: 889  GLSGSPGEAGSPGLIGLTGAKGIRGESGARGEPGLMGPPGIPGHVGPAGSPGNIGSPGAP 948

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----------- 200
            G+PG +G  G  G  G PGP G PG  G  G KG+ G PG  GLDG  G           
Sbjct: 949  GLPGAKGDAGDLGRPGNPGPIGNPGLPGMDGNKGESGSPGPQGLDGLQGPQGLSGERGLP 1008

Query: 201  -LPGEPG------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             LPG PG      L G PG  G  G PG +G PG  G+ G  G+ G  G
Sbjct: 1009 GLPGSPGSIGNRGLHGAPGETGQPGKPGTEGPPGSPGLVGPPGSPGHVG 1057



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 70/137 (51%), Gaps = 24/137 (17%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G +GE GE G+PG  G PG +G+P                  G+PG +G  G  G++G 
Sbjct: 249 QGTRGEAGEPGSPGSPGAPGSRGLP------------------GLPGKDGINGEDGEIGS 290

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKD---GIPGTNGTNGEKGM 243
           PG  G  G  GLPG PGL GI G     G+DG  G+ G+ G+    G PG  G  G  G 
Sbjct: 291 PGSPGPAGLRGLPGMPGLPGIKGHRGFPGLDGAKGEQGVSGEKGSTGAPGPMGPIGPMGP 350

Query: 244 TGPRGNRGKSGINGVPG 260
            GPRG RG+ G +G PG
Sbjct: 351 AGPRGERGREGSSGPPG 367



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 9/104 (8%)

Query: 130  MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
             G +G +GE G  GV GP GP+G PG  G  G KGD G         +EG +G KG  G+
Sbjct: 1110 AGERGPKGEAGPQGVEGPQGPRGKPGPIGLEGTKGDRG---------EEGPKGAKGHRGF 1160

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             G  GL G  GLPGE G+ G+ G +G DG PG  G PG++G PG
Sbjct: 1161 NGLQGLPGSPGLPGEKGMPGLSGLSGKDGEPGIRGSPGREGNPG 1204



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 85/180 (47%), Gaps = 18/180 (10%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            QG      E   PG  G  G +G  G  G+ G+ GE GE G+PG  GP G +G+PG  G
Sbjct: 248 FQGTRGEAGEPGSPGSPGAPGSRGLPGLPGKDGINGEDGEIGSPGSPGPAGLRGLPGMPG 307

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             G KG  G+PG  G  G++G  G KG  G PG +G  G  G  G  G  G  G +G  G
Sbjct: 308 LPGIKGHRGFPGLDGAKGEQGVSGEKGSTGAPGPMGPIGPMGPAGPRGERGREGSSGPPG 367

Query: 219 IPGKDGLPGKDGIPGT------------------NGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G DG+ G  G PG                    G+ G KG  G +G RG+SG  G PG
Sbjct: 368 LRGPDGIIGPPGQPGAVGKPGPPGFPGIPGSKGDQGSQGPKGSQGLQGPRGESGRPGQPG 427



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 81/194 (41%), Gaps = 51/194 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            +QG    + E  PPG QG     G +GA GE G  GE G+ G PG  G PGP+G  G E
Sbjct: 604 GIQGADGKSGEQGPPGSQG---LPGPLGAPGERGYPGEPGKDGEPGNPGSPGPRGDTGKE 660

Query: 158 ---------------------GKRGPKGDMGYPGPQGIPGDEGK---------------- 180
                                G  GP+G  G PG  G PG  GK                
Sbjct: 661 GPPGIQGPPGPAGNDGARGSPGSVGPRGFQGVPGATGNPGVPGKDGEAGIQGPPGSPGPI 720

Query: 181 --------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG---RNGMDGIPGKDGLPGKD 229
                    G +G MG+PG +G  G  G  G  GL G+PG     G  G PG  GLPG  
Sbjct: 721 GNRGERGIPGERGFMGFPGPMGPKGETGTQGADGLTGLPGLKGERGSTGAPGLLGLPGAR 780

Query: 230 GIPGTNGTNGEKGM 243
           G+PG  G  GE+G 
Sbjct: 781 GLPGEPGQKGERGA 794



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 91/223 (40%), Gaps = 72/223 (32%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV----------- 144
            L   QG          PG  G IG +G  GA GE G  G+ G +G PG            
Sbjct: 995  LQGPQGLSGERGLPGLPGSPGSIGNRGLHGAPGETGQPGKPGTEGPPGSPGLVGPPGSPG 1054

Query: 145  -------------------------VGPPGPQGIPG---------------------DEG 158
                                      GPP   GIPG                       G
Sbjct: 1055 HVGEIGPEGPIGKPGPPGIGGRPGDKGPP---GIPGAAGPSGPPGLPGPLGPTGPTGLAG 1111

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR---NG 215
            +RGPKG+    GPQG+       GP+G  G PG IGL+G  G  GE G  G  G    NG
Sbjct: 1112 ERGPKGEA---GPQGV------EGPQGPRGKPGPIGLEGTKGDRGEEGPKGAKGHRGFNG 1162

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            + G+PG  GLPG+ G+PG +G +G+ G  G RG+ G+ G  G+
Sbjct: 1163 LQGLPGSPGLPGEKGMPGLSGLSGKDGEPGIRGSPGREGNPGL 1205



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 70/147 (47%), Gaps = 12/147 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +GE G  G  G  G  G +G PG+   PG  GI G++G+ G  G  G  G +G+PG  
Sbjct: 250 GTRGEAGEPGSPGSPGAPGSRGLPGL---PGKDGINGEDGEIGSPGSPGPAGLRGLPGMP 306

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G  G KG  G+PG  G  G  G+ GE          G  G PG  G  G  G  G  G  
Sbjct: 307 GLPGIKGHRGFPGLDGAKGEQGVSGE---------KGSTGAPGPMGPIGPMGPAGPRGER 357

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAIC 265
           G +G +GP G RG  GI G PG P   
Sbjct: 358 GREGSSGPPGLRGPDGIIGPPGQPGAV 384



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 89/205 (43%), Gaps = 48/205 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL G  G KGE G+ G  G+      +G  GE+G PG+ G PG  G  G  G  G  G 
Sbjct: 972  PGLPGMDGNKGESGSPGPQGLDGLQGPQGLSGERGLPGLPGSPGSIGNRGLHGAPGETGQ 1031

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGL------------------DGRDGLPG---- 203
             G PG +G PG  G  GP G  G+ G IG                    G  G+PG    
Sbjct: 1032 PGKPGTEGPPGSPGLVGPPGSPGHVGEIGPEGPIGKPGPPGIGGRPGDKGPPGIPGAAGP 1091

Query: 204  --------------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
                                E G  G  G  G++G  G  G PG  G+ GT G  GE+G 
Sbjct: 1092 SGPPGLPGPLGPTGPTGLAGERGPKGEAGPQGVEGPQGPRGKPGPIGLEGTKGDRGEEGP 1151

Query: 244  TGPRGNRGKSGINGVPGTPAICAYK 268
             G +G+RG +G+ G+PG+P +   K
Sbjct: 1152 KGAKGHRGFNGLQGLPGSPGLPGEK 1176


>gi|350424349|ref|XP_003493766.1| PREDICTED: collagen alpha-1(XI) chain-like [Bombus impatiens]
          Length = 1804

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 99/209 (47%), Gaps = 51/209 (24%)

Query: 108 EYCPPGLQGPIG---------------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
           E  P G QGPIG                 GE G KGE G +GE+G+ GA G  G  GPQG
Sbjct: 733 EQGPQGPQGPIGFPGVRGMKGDEGKRGSPGERGEKGERGPEGEKGDIGAKGEPGLSGPQG 792

Query: 153 IPGDEGKRGPKGDMGYPGPQG------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           IPG EG  GPKG   + GP+G      +PG++GK GP G +GYPG +G  G  G PG  G
Sbjct: 793 IPGLEGLEGPKG---FEGPRGETGLVGLPGEKGKTGPPGFVGYPGNVGEKGDKGQPGREG 849

Query: 207 LDGIPGRNG------------------------MDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             G  G  G                         +G+PG  G  G+ G PG  G +G  G
Sbjct: 850 PSGDKGERGNNGASGERGEPGPRGFRGARGRRGAEGLPGPKGDTGQPGPPGLQGESGTPG 909

Query: 243 MTGPR---GNRGKSGINGVPGTPAICAYK 268
           + GPR   G+ G++G+NG  G P     +
Sbjct: 910 VEGPRGFVGSPGQAGLNGKDGIPGPSGER 938



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 88/162 (54%), Gaps = 9/162 (5%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           +G  G +G +G+ G+ G  G  G+PG  G PG  G+ G++G +GP+G +G+PG +G+ GD
Sbjct: 695 LGPTGLVGPQGKPGIPGLSGADGSPGHPGNPGVPGMKGEQGPQGPQGPIGFPGVRGMKGD 754

Query: 178 EGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           EGKRG  G+ G  G  G +G     G  GEPGL G  G  G++G+ G  G  G  G  G 
Sbjct: 755 EGKRGSPGERGEKGERGPEGEKGDIGAKGEPGLSGPQGIPGLEGLEGPKGFEGPRGETGL 814

Query: 235 NGTNGEKGMTGP------RGNRGKSGINGVPGTPAICAYKRE 270
            G  GEKG TGP       GN G+ G  G PG       K E
Sbjct: 815 VGLPGEKGKTGPPGFVGYPGNVGEKGDKGQPGREGPSGDKGE 856



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 90/202 (44%), Gaps = 51/202 (25%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR-------------- 160
            QGP G+ G+ G  G  G  G  GE G+PG  G  GPQG PG +GK               
Sbjct: 959  QGPAGEPGQPGEPGSPGNPGAPGESGSPGEQGKEGPQGPPGLQGKEGSPGPGGLPGFPGE 1018

Query: 161  ----------GPKGDMGYPGPQGIPGDEGKRGP------------------------KGD 186
                      G KG++G PG QG  GD+G +G                         KGD
Sbjct: 1019 RGANGLPGMPGAKGEIGPPGLQGPSGDKGAQGESGKDGESGPQGKQGPKGPPGPVGLKGD 1078

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G PG +G  GRDGLPG+ GL G PG     G+PG+DG  G  G PG  G  G +  TGP
Sbjct: 1079 RGEPGPVGPTGRDGLPGQRGLPGAPGPV---GVPGEDGDKGDIGPPGEKGFKGSQAETGP 1135

Query: 247  RGNRGKSGINGVPGTPAICAYK 268
             G  G  G+ G PG   +   K
Sbjct: 1136 PGAPGAQGLRGEPGAIGLPGEK 1157



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 82/167 (49%), Gaps = 33/167 (19%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE------------------RGEK 139
             + G   +  E  PPGLQGP G KG   A+GE G  GE                  +G++
Sbjct: 1023 GLPGMPGAKGEIGPPGLQGPSGDKG---AQGESGKDGESGPQGKQGPKGPPGPVGLKGDR 1079

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G PG VGP G  G+PG       +G  G PGP G+PG++G    KGD+G PG  G  G  
Sbjct: 1080 GEPGPVGPTGRDGLPGQ------RGLPGAPGPVGVPGEDGD---KGDIGPPGEKGFKGSQ 1130

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
               G P   G PG  G+ G PG  GLPG+ G PG  G  G KG  GP
Sbjct: 1131 AETGPP---GAPGAQGLRGEPGAIGLPGEKGPPGEIGRRGPKGEDGP 1174



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 92/179 (51%), Gaps = 27/179 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G +G IG  G  G+KG+ G++G+PG  G  G +G  G++G  G KG+ G  GPQ
Sbjct: 732 GEQGPQGPQGPIGFPGVRGMKGDEGKRGSPGERGEKGERGPEGEKGDIGAKGEPGLSGPQ 791

Query: 173 GIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPG---RNGMDGIPGKDGLP 226
           GIPG EG  GPKG     G  G +GL G  G  G PG  G PG     G  G PG++G  
Sbjct: 792 GIPGLEGLEGPKGFEGPRGETGLVGLPGEKGKTGPPGFVGYPGNVGEKGDKGQPGREGPS 851

Query: 227 GKDGIPGTNGTNGEKGM------------------TGPRGNRGK---SGINGVPGTPAI 264
           G  G  G NG +GE+G                    GP+G+ G+    G+ G  GTP +
Sbjct: 852 GDKGERGNNGASGERGEPGPRGFRGARGRRGAEGLPGPKGDTGQPGPPGLQGESGTPGV 910



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 99/245 (40%), Gaps = 84/245 (34%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGA---------KGEMGVKGERGEKGA--------- 141
            +GF  S  E  PPG  G  G +GE GA          GE+G +G +GE G          
Sbjct: 1124 KGFKGSQAETGPPGAPGAQGLRGEPGAIGLPGEKGPPGEIGRRGPKGEDGPVGASGPPGP 1183

Query: 142  ------------------PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
                               G+VGP GP G PG++G RGPKG  G  GP G+ G +G +G 
Sbjct: 1184 VGPQGLPGPSGLKGEVGDTGIVGPVGPAGNPGEQGPRGPKGSEGIQGPPGVEGRQGAKGE 1243

Query: 184  KGDMGYPGRIGLDGRDGLPGEPG------------------------------------- 206
             G +G PG IG +G+ G  G PG                                     
Sbjct: 1244 SGAVGLPGLIGPEGKQGERGPPGPKGEEGKSGPPGPPGSRGINGPEGPKGNAGPPGFPGP 1303

Query: 207  --------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                      G PG+NG DG PG  G PG+ G PG  G     G+ G +G+ G +G+ G 
Sbjct: 1304 PGEPGLVGPKGEPGKNGEDGKPGDPGAPGEIGPPGKEGL---PGLAGKQGSEGPAGVQGS 1360

Query: 259  PGTPA 263
            PG P 
Sbjct: 1361 PGLPG 1365



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 86/175 (49%), Gaps = 30/175 (17%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            KGE G  GE    G+ G+ GAPG +GPPG +G+PG  GK+G +G  G  G  G+PG++G 
Sbjct: 1313 KGEPGKNGE---DGKPGDPGAPGEIGPPGKEGLPGLAGKQGSEGPAGVQGSPGLPGEKGD 1369

Query: 181  RGPK---------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK--------- 222
             GP          G  G PG  GL G  GLPG  G +G PG +G  G PGK         
Sbjct: 1370 MGPPGAQGPPGSIGSQGLPGPSGLPGVRGLPGLAGENGPPGMSGAVGAPGKVGPVGPKGP 1429

Query: 223  DGLPGKDGIP---------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  GK GI          G  G  GEKG  GPRG  G  G  G  G P +  +K
Sbjct: 1430 KGDRGKRGIKGHRGELGHVGVKGEQGEKGEQGPRGALGLEGPKGNQGPPGLLGFK 1484



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 98/218 (44%), Gaps = 51/218 (23%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              + G      +  PPG  G  G  GE G KG+ G +G  G+KG  G  G  G +G PG 
Sbjct: 812  TGLVGLPGEKGKTGPPGFVGYPGNVGEKGDKGQPGREGPSGDKGERGNNGASGERGEPGP 871

Query: 157  ------------EGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGL 201
                        EG  GPKGD G PGP G+ G+ G     GP+G +G PG+ GL+G+DG+
Sbjct: 872  RGFRGARGRRGAEGLPGPKGDTGQPGPPGLQGESGTPGVEGPRGFVGSPGQAGLNGKDGI 931

Query: 202  PGEPG------------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            PG  G                  + G  G  G  G PG+ G PG  G PG +G+ GE+G 
Sbjct: 932  PGPSGERGPVGDSGPPGPPGAPGVIGPQGPAGEPGQPGEPGSPGNPGAPGESGSPGEQGK 991

Query: 244  TGPRGNRG------------------KSGINGVPGTPA 263
             GP+G  G                  + G NG+PG P 
Sbjct: 992  EGPQGPPGLQGKEGSPGPGGLPGFPGERGANGLPGMPG 1029



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 100/230 (43%), Gaps = 72/230 (31%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------- 152
           +G   S  E    G +GP G+KG+IGAKGE G+ G +G  G  G+ GP G +G       
Sbjct: 755 EGKRGSPGERGEKGERGPEGEKGDIGAKGEPGLSGPQGIPGLEGLEGPKGFEGPRGETGL 814

Query: 153 --IPGDEGKRGP------------KGDMGYPGPQGIPGDEGKRG---------------- 182
             +PG++GK GP            KGD G PG +G  GD+G+RG                
Sbjct: 815 VGLPGEKGKTGPPGFVGYPGNVGEKGDKGQPGREGPSGDKGERGNNGASGERGEPGPRGF 874

Query: 183 --------------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                         PKGD G PG  GL G  G PG      + G  G  G PG+ GL GK
Sbjct: 875 RGARGRRGAEGLPGPKGDTGQPGPPGLQGESGTPG------VEGPRGFVGSPGQAGLNGK 928

Query: 229 DGIPGTNGTNGEKGMT---------------GPRGNRGKSGINGVPGTPA 263
           DGIPG +G  G  G +               GP G  G+ G  G PG P 
Sbjct: 929 DGIPGPSGERGPVGDSGPPGPPGAPGVIGPQGPAGEPGQPGEPGSPGNPG 978



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 94/227 (41%), Gaps = 81/227 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKRGPKGD--- 165
            PG QGP G KG  G +G  GV+G +G KG  G VG P   GP+G  G+ G  GPKG+   
Sbjct: 1214 PGEQGPRGPKGSEGIQGPPGVEGRQGAKGESGAVGLPGLIGPEGKQGERGPPGPKGEEGK 1273

Query: 166  ---------MGYPGPQGI------------------------PGDEGKRGPKGDMGYPGR 192
                      G  GP+G                         PG  G+ G  GD G PG 
Sbjct: 1274 SGPPGPPGSRGINGPEGPKGNAGPPGFPGPPGEPGLVGPKGEPGKNGEDGKPGDPGAPGE 1333

Query: 193  IGLDGRDGLPGEPGLD------------GIPGRN---------------GMDGIPGKDGL 225
            IG  G++GLPG  G              G+PG                 G  G+PG  GL
Sbjct: 1334 IGPPGKEGLPGLAGKQGSEGPAGVQGSPGLPGEKGDMGPPGAQGPPGSIGSQGLPGPSGL 1393

Query: 226  PGKDGIPGTNGTNGEKGMT---------------GPRGNRGKSGING 257
            PG  G+PG  G NG  GM+               GP+G+RGK GI G
Sbjct: 1394 PGVRGLPGLAGENGPPGMSGAVGAPGKVGPVGPKGPKGDRGKRGIKG 1440



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 96/245 (39%), Gaps = 75/245 (30%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------- 160
           L GP G KGE G  G  G+ G++GE+G    VG  G QG+PG EG +             
Sbjct: 577 LSGPPGMKGEQGVPGLPGLPGDKGERG---FVGATGEQGLPGHEGMQGDDGPPGLPGLPG 633

Query: 161 --------GPKGDMGYPGPQGIPGDEGKRGPKGD-------------------------- 186
                   GP+G  G PG  GIPG EG  G KG+                          
Sbjct: 634 EMGPRGFIGPRGFPGLPGNPGIPGSEGPPGAKGNTGPPGPPGVPGSPGPIGPVGPPGPQG 693

Query: 187 ----------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---------GIPGKDGLPG 227
                      G PG  GL G DG PG PG  G+PG  G           G PG  G+ G
Sbjct: 694 LLGPTGLVGPQGKPGIPGLSGADGSPGHPGNPGVPGMKGEQGPQGPQGPIGFPGVRGMKG 753

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP------GTPAICAYKRESCSLLPNSETS 281
            +G  G+ G  GEKG  GP G +G  G  G P      G P +   +       P  ET 
Sbjct: 754 DEGKRGSPGERGEKGERGPEGEKGDIGAKGEPGLSGPQGIPGLEGLEGPKGFEGPRGETG 813

Query: 282 QLLIP 286
            + +P
Sbjct: 814 LVGLP 818



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 81/167 (48%), Gaps = 30/167 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE---------------KGAPGVVGPPGPQGIPGD 156
            PGL G  G +G  G +G  G+ GE+G+               +G PG  G PG +G+PG 
Sbjct: 1343 PGLAGKQGSEGPAGVQGSPGLPGEKGDMGPPGAQGPPGSIGSQGLPGPSGLPGVRGLPGL 1402

Query: 157  EGKRGP---KGDMGYPG------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             G+ GP    G +G PG      P+G  GD GKRG KG  G  G +G+ G  G  GE G 
Sbjct: 1403 AGENGPPGMSGAVGAPGKVGPVGPKGPKGDRGKRGIKGHRGELGHVGVKGEQGEKGEQGP 1462

Query: 208  D---GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                G+ G  G  G PG  G  G DG PG  G    +G  GP+GN G
Sbjct: 1463 RGALGLEGPKGNQGPPGLLGFKGNDGPPGLPGI---EGAIGPKGNAG 1506



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 9/123 (7%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L  ++G      E  PPG+ G +G  G++G  G  G KG+RG++G          +G  G
Sbjct: 1393 LPGVRGLPGLAGENGPPGMSGAVGAPGKVGPVGPKGPKGDRGKRGI---------KGHRG 1443

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            + G  G KG+ G  G QG  G  G  GPKG+ G PG +G  G DG PG PG++G  G  G
Sbjct: 1444 ELGHVGVKGEQGEKGEQGPRGALGLEGPKGNQGPPGLLGFKGNDGPPGLPGIEGAIGPKG 1503

Query: 216  MDG 218
              G
Sbjct: 1504 NAG 1506



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 90/196 (45%), Gaps = 57/196 (29%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA------------------PGVVGPPGPQGI 153
            PG  GP+G  GE G KG++G  GE+G KG+                  PG +G PG +G 
Sbjct: 1100 PGAPGPVGVPGEDGDKGDIGPPGEKGFKGSQAETGPPGAPGAQGLRGEPGAIGLPGEKGP 1159

Query: 154  PGDEGKRGPKGD---------------------------------MGYPGPQGIPGDEGK 180
            PG+ G+RGPKG+                                 +G  GP G PG++G 
Sbjct: 1160 PGEIGRRGPKGEDGPVGASGPPGPVGPQGLPGPSGLKGEVGDTGIVGPVGPAGNPGEQGP 1219

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------IPGT 234
            RGPKG  G  G  G++GR G  GE G  G+PG  G +G  G+ G PG  G       PG 
Sbjct: 1220 RGPKGSEGIQGPPGVEGRQGAKGESGAVGLPGLIGPEGKQGERGPPGPKGEEGKSGPPGP 1279

Query: 235  NGTNGEKGMTGPRGNR 250
             G+ G  G  GP+GN 
Sbjct: 1280 PGSRGINGPEGPKGNA 1295



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 94/248 (37%), Gaps = 81/248 (32%)

Query: 108  EYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEK------------------------G 140
            E   PG++GP   +G  G+ G  G+ G+ G  GE+                        G
Sbjct: 904  ESGTPGVEGPRGFVGSPGQAGLNGKDGIPGPSGERGPVGDSGPPGPPGAPGVIGPQGPAG 963

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK-------------------- 180
             PG  G PG  G PG  G+ G  G+ G  GPQG PG +GK                    
Sbjct: 964  EPGQPGEPGSPGNPGAPGESGSPGEQGKEGPQGPPGLQGKEGSPGPGGLPGFPGERGANG 1023

Query: 181  ----------------RGPKGDMGYPGRIGLDGRD---------------GLPGEPGLDG 209
                            +GP GD G  G  G DG                 GL G+ G  G
Sbjct: 1024 LPGMPGAKGEIGPPGLQGPSGDKGAQGESGKDGESGPQGKQGPKGPPGPVGLKGDRGEPG 1083

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN---GVPGTPAICA 266
              G  G DG+PG+ GLPG  G  G  G +G+KG  GP G +G  G     G PG P    
Sbjct: 1084 PVGPTGRDGLPGQRGLPGAPGPVGVPGEDGDKGDIGPPGEKGFKGSQAETGPPGAPGAQG 1143

Query: 267  YKRESCSL 274
             + E  ++
Sbjct: 1144 LRGEPGAI 1151



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 85/225 (37%), Gaps = 66/225 (29%)

Query: 112  PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKR-------- 160
            PG +G  GQ G  G +GE G   V+G RG  G+PG  G  G  GIPG  G+R        
Sbjct: 887  PGPKGDTGQPGPPGLQGESGTPGVEGPRGFVGSPGQAGLNGKDGIPGPSGERGPVGDSGP 946

Query: 161  -------------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR--- 192
                                     G  G+ G PG  G PG++GK GP+G  G  G+   
Sbjct: 947  PGPPGAPGVIGPQGPAGEPGQPGEPGSPGNPGAPGESGSPGEQGKEGPQGPPGLQGKEGS 1006

Query: 193  ------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP-------- 232
                         G +G  G+PG  G  G PG  G  G  G  G  GKDG          
Sbjct: 1007 PGPGGLPGFPGERGANGLPGMPGAKGEIGPPGLQGPSGDKGAQGESGKDGESGPQGKQGP 1066

Query: 233  -------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                   G  G  GE G  GP G  G  G  G+PG P       E
Sbjct: 1067 KGPPGPVGLKGDRGEPGPVGPTGRDGLPGQRGLPGAPGPVGVPGE 1111



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 85/214 (39%), Gaps = 78/214 (36%)

Query: 125 GAKGEMGVKGERGEKGAPG------------------VVGPPGPQG------IPGDEGKR 160
           G  GE+G  G RGE+G PG                  + GPPG +G      +PG  G +
Sbjct: 540 GEPGEVGESGPRGERGIPGNTGREGRRGRPGRDGERGLSGPPGMKGEQGVPGLPGLPGDK 599

Query: 161 GPKGDMGYPGPQGIPGDEGKR---------------------GPKGDMGYPGRIGLDGRD 199
           G +G +G  G QG+PG EG +                     GP+G  G PG  G+ G +
Sbjct: 600 GERGFVGATGEQGLPGHEGMQGDDGPPGLPGLPGEMGPRGFIGPRGFPGLPGNPGIPGSE 659

Query: 200 GLPGEP---------------------------------GLDGIPGRNGMDGIPGKDGLP 226
           G PG                                   GL G  G+ G+ G+ G DG P
Sbjct: 660 GPPGAKGNTGPPGPPGVPGSPGPIGPVGPPGPQGLLGPTGLVGPQGKPGIPGLSGADGSP 719

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G PG  G  GE+G  GP+G  G  G+ G+ G
Sbjct: 720 GHPGNPGVPGMKGEQGPQGPQGPIGFPGVRGMKG 753



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 65/117 (55%), Gaps = 3/117 (2%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           +G PG+ G+ GP+G+ G PG  G  G  G+ G  G+ G  G  G+ G  G+PG PGL G 
Sbjct: 539 KGEPGEVGESGPRGERGIPGNTGREGRRGRPGRDGERGLSGPPGMKGEQGVPGLPGLPGD 598

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPGTPAI 264
            G  G  G  G+ GLPG +G+ G +G  G  G+    GPRG  G  G  G+PG P I
Sbjct: 599 KGERGFVGATGEQGLPGHEGMQGDDGPPGLPGLPGEMGPRGFIGPRGFPGLPGNPGI 655


>gi|345490482|ref|XP_001603734.2| PREDICTED: collagen alpha-2(I) chain-like [Nasonia vitripennis]
          Length = 1107

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 83/183 (45%), Gaps = 30/183 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G IG  G IG  GE G  G RG KG  G+ GP G QG+ G  G  G  G  G PGP 
Sbjct: 442 GLPGAIGPPGPIGKIGEPGFPGIRGIKGDQGLPGPKGNQGLQGPRGDAGRTGATGEPGP- 500

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
             PG  GK GP+G+ G PG  GL G+ G PG  GL G PG  G  GI G  G+PG+ G  
Sbjct: 501 --PGATGKEGPRGEKGTPGTNGLVGQPGFPGVRGLPGTPGTPGQPGIEGLPGVPGEKGGR 558

Query: 233 GTNGTNGEK---------------------------GMTGPRGNRGKSGINGVPGTPAIC 265
           G  G  GE                            G  GP G RG +G  G+PG     
Sbjct: 559 GDTGLKGEAGFPGPRGQPGPPGNEGKKGKRGISGPVGAPGPAGERGTTGPRGLPGADGAT 618

Query: 266 AYK 268
             K
Sbjct: 619 GSK 621



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 93/166 (56%), Gaps = 12/166 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD 165
           PG  G  G KG  G +G MG  G +G  G  G VGP GPQG+      PG+ GK G  GD
Sbjct: 612 PGADGATGSKGAQGERGPMGPMGPKGTVGDVGRVGPVGPQGLRGQPGRPGNPGKPGNNGD 671

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G  G PG++G +GP G +G    +G  G  G PGEPG DG  G  G  G+ G+ G 
Sbjct: 672 RGAAGADGKPGEQGIQGPPGSIGP---VGPPGEKGFPGEPGEDGEQGPPGPPGLDGQPGT 728

Query: 226 PGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPGTPAICAYK 268
            GK G+PG  G+ G++G+    GP+G+RG +G+ GVPG P     K
Sbjct: 729 RGKPGLPGPEGSKGDRGLEGLPGPKGHRGFNGLQGVPGQPGAPGDK 774



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 86/179 (48%), Gaps = 27/179 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G +G  G  G  G  GE GE GAPG  G PGP+G PG  G  G KG  G  G 
Sbjct: 330 PGTQGSPGPRGLPGLPGNDGEPGEDGELGAPGPHGLPGPRGAPGLPGLPGTKGHKGTAGA 389

Query: 172 QGI------PGDEG------------------KRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            G+      PG++G                   RG +G  G PG  G+ G DGLPG  G 
Sbjct: 390 DGLRGQPGSPGEKGVMGTPGPVGPVGPVGPVGSRGERGRDGSPGPSGVRGADGLPGAIGP 449

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G  G+ G  G PG  G+ G  G+PG  G    +G+ GPRG+ G++G  G PG P    
Sbjct: 450 PGPIGKIGEPGFPGIRGIKGDQGLPGPKGN---QGLQGPRGDAGRTGATGEPGPPGATG 505



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 83/181 (45%), Gaps = 30/181 (16%)

Query: 113 GLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           GLQGP G  G  GA GE       G +G RGEKG PG  G  G  G PG  G  G  G  
Sbjct: 481 GLQGPRGDAGRTGATGEPGPPGATGKEGPRGEKGTPGTNGLVGQPGFPGVRGLPGTPGTP 540

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGL------------DGRDGLPGEPGLDGIPGRN 214
           G PG +G+PG  G++G +GD G  G  G             +G+ G  G  G  G PG  
Sbjct: 541 GQPGIEGLPGVPGEKGGRGDTGLKGEAGFPGPRGQPGPPGNEGKKGKRGISGPVGAPGPA 600

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK------------SGINGVPGTP 262
           G  G  G  GLPG DG  G+ G  GE+G  GP G +G              G+ G PG P
Sbjct: 601 GERGTTGPRGLPGADGATGSKGAQGERGPMGPMGPKGTVGDVGRVGPVGPQGLRGQPGRP 660

Query: 263 A 263
            
Sbjct: 661 G 661



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 83/176 (47%), Gaps = 36/176 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---------------RGEKGAPGVVGPPGPQGIPGD 156
           PG++G  G  GE G +G+ G+KGE                G+KG  G+ GP         
Sbjct: 543 PGIEGLPGVPGEKGGRGDTGLKGEAGFPGPRGQPGPPGNEGKKGKRGISGP--------- 593

Query: 157 EGKRGPKGDMGYPGPQGIP---------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            G  GP G+ G  GP+G+P         G +G+RGP G MG  G +G  GR G  G  GL
Sbjct: 594 VGAPGPAGERGTTGPRGLPGADGATGSKGAQGERGPMGPMGPKGTVGDVGRVGPVGPQGL 653

Query: 208 DGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PGR G  G PG +   G  G DG PG  G  G  G  GP G  G+ G  G PG
Sbjct: 654 RGQPGRPGNPGKPGNNGDRGAAGADGKPGEQGIQGPPGSIGPVGPPGEKGFPGEPG 709



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 85/197 (43%), Gaps = 45/197 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------- 158
           PG  G  G+ GE+GA G  G+ G RG  G PG+ G  G +G  G +G             
Sbjct: 345 PGNDGEPGEDGELGAPGPHGLPGPRGAPGLPGLPGTKGHKGTAGADGLRGQPGSPGEKGV 404

Query: 159 -----------------KRGPKGDMGYPGPQGI------PGDEGKRGPKGDM---GYPGR 192
                             RG +G  G PGP G+      PG  G  GP G +   G+PG 
Sbjct: 405 MGTPGPVGPVGPVGPVGSRGERGRDGSPGPSGVRGADGLPGAIGPPGPIGKIGEPGFPGI 464

Query: 193 IGLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G+ G  GLPG  G  G+       GR G  G PG  G  GK+G  G  GT G  G+ G 
Sbjct: 465 RGIKGDQGLPGPKGNQGLQGPRGDAGRTGATGEPGPPGATGKEGPRGEKGTPGTNGLVGQ 524

Query: 247 RGNRGKSGINGVPGTPA 263
            G  G  G+ G PGTP 
Sbjct: 525 PGFPGVRGLPGTPGTPG 541



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/121 (43%), Positives = 60/121 (49%), Gaps = 18/121 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPPGPQGIP 154
           G+QGP G  G +G  GE G  GE GE                  +G PG+ GP G +G  
Sbjct: 685 GIQGPPGSIGPVGPPGEKGFPGEPGEDGEQGPPGPPGLDGQPGTRGKPGLPGPEGSKGDR 744

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G EG  GPKG  G+ G QG+PG  G  G KG  G  G  G DG  GL G PG DG PG  
Sbjct: 745 GLEGLPGPKGHRGFNGLQGVPGQPGAPGDKGAQGPVGPPGKDGDTGLRGPPGRDGNPGPQ 804

Query: 215 G 215
           G
Sbjct: 805 G 805



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 80/162 (49%), Gaps = 24/162 (14%)

Query: 93  RIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
           R+  V  QG          PG  G  G +G  GA G+ G +G +G  G+ G VGPPG +G
Sbjct: 644 RVGPVGPQGLRGQPGRPGNPGKPGNNGDRGAAGADGKPGEQGIQGPPGSIGPVGPPGEKG 703

Query: 153 IPGDEGKRGP---------------KGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIG 194
            PG+ G+ G                +G  G PGP+G  GD   EG  GPKG  G+ G  G
Sbjct: 704 FPGEPGEDGEQGPPGPPGLDGQPGTRGKPGLPGPEGSKGDRGLEGLPGPKGHRGFNGLQG 763

Query: 195 LDGRDGLPGEPGLDGI---PGRNG---MDGIPGKDGLPGKDG 230
           + G+ G PG+ G  G    PG++G   + G PG+DG PG  G
Sbjct: 764 VPGQPGAPGDKGAQGPVGPPGKDGDTGLRGPPGRDGNPGPQG 805



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 64/136 (47%), Gaps = 21/136 (15%)

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G +G PG    PG +G  GP+G  G PG  G PG++G+ G  G  G PG  G     GLP
Sbjct: 322 GEIGEPGT---PGTQGSPGPRGLPGLPGNDGEPGEDGELGAPGPHGLPGPRGA---PGLP 375

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---------------NGTNGEKGMTGPR 247
           G PG  G  G  G DG+ G+ G PG+ G+ GT                G  G  G  GP 
Sbjct: 376 GLPGTKGHKGTAGADGLRGQPGSPGEKGVMGTPGPVGPVGPVGPVGSRGERGRDGSPGPS 435

Query: 248 GNRGKSGINGVPGTPA 263
           G RG  G+ G  G P 
Sbjct: 436 GVRGADGLPGAIGPPG 451



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------IPGT 234
           RG  G+ G PG  G  G  GLPG PG DG PG +G  G PG  GLPG  G      +PGT
Sbjct: 321 RGEIGEPGTPGTQGSPGPRGLPGLPGNDGEPGEDGELGAPGPHGLPGPRGAPGLPGLPGT 380

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G  G RG  G  G  GV GT
Sbjct: 381 KGHKGTAGADGLRGQPGSPGEKGVMGT 407



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 30/60 (50%)

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G PG  G  G PG  GLPG  G  G  G +GE G  GP G  G  G  G+PG P    +K
Sbjct: 325 GEPGTPGTQGSPGPRGLPGLPGNDGEPGEDGELGAPGPHGLPGPRGAPGLPGLPGTKGHK 384


>gi|350536279|ref|NP_001233588.1| collagen type II A precursor [Oryzias latipes]
 gi|344313139|dbj|BAK64232.1| Type II collagen A precursor isoform 2 [Oryzias latipes]
          Length = 1421

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 83/143 (58%), Gaps = 12/143 (8%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPKGDMGYPGPQ 172
           GP+G KG  G  G  G KGE G KG    +GPPG QG P   G+EGKRGP+G+ G  GP 
Sbjct: 381 GPLGPKGTSGDPGIAGFKGEAGPKG---EIGPPGLQGAPGPQGEEGKRGPRGEPGAAGPL 437

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG+   RG  G+ G+PG+ GL G+ G PGE    G PG +G  G  G  G PG+ G+P
Sbjct: 438 GPPGE---RGAPGNRGFPGQDGLAGQKGAPGE---RGPPGASGAKGATGDPGRPGESGLP 491

Query: 233 GTNGTNGEKGMTGPRGNRGKSGI 255
           G  G  G  G  GP+G  G SG 
Sbjct: 492 GARGLTGRPGDAGPQGKVGPSGA 514



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 90/197 (45%), Gaps = 35/197 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG  G  G+ G  GA+G  G +G RGE G PG  GP G  G PG +G  G KG  G PG 
Sbjct: 302 PGSPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPSGASGNPGTDGIPGAKGSAGAPGI 361

Query: 171 -----------------------PQGIPGD------EGKRGPKGDMGYPGRIGLDGRDGL 201
                                  P+G  GD      +G+ GPKG++G PG  G  G  G 
Sbjct: 362 AGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIAGFKGEAGPKGEIGPPGLQGAPGPQGE 421

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+ G  G PG  G  G PG+ G PG  G PG +G  G+KG  G RG  G SG  G  G 
Sbjct: 422 EGKRGPRGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGQKGAPGERGPPGASGAKGATGD 481

Query: 262 PAICAYKRESCSLLPNS 278
           P      R   S LP +
Sbjct: 482 PG-----RPGESGLPGA 493



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 87/177 (49%), Gaps = 15/177 (8%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  PPGLQG  G +GE G +G  G  G  G  G PG  G PG +G PG
Sbjct: 394 IAGFKGEAGPKGEIGPPGLQGAPGPQGEEGKRGPRGEPGAAGPLGPPGERGAPGNRGFPG 453

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            +G  G K   G PG +G PG  G +G  GD G PG  GL G  GL G PG  G  G+ G
Sbjct: 454 QDGLAGQK---GAPGERGPPGASGAKGATGDPGRPGESGLPGARGLTGRPGDAGPQGKVG 510

Query: 216 MDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+D            G PG  G PG  G  GE G +G +G  G  G+ G+PG
Sbjct: 511 PSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGLLGAPGLRGLPG 567



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 87/207 (42%), Gaps = 51/207 (24%)

Query: 100 QGFCNSTKEYCPPGLQGP---------------IGQKGEIGAKGEMGVKGERGEKGAPGV 144
           +GF        P GLQGP               IG  G  GA+G  G++G  GE+GA G+
Sbjct: 635 RGFPGERGPAGPQGLQGPRGLPGTPGTDGPKGAIGPAGSRGAQGPQGLQGMPGERGAAGI 694

Query: 145 VGPPG---------PQGIPGDEGKR---------------------GPKGDMGYPGPQGI 174
            GP G         P+G  G +G R                     GP G  G PG +G 
Sbjct: 695 PGPKGDRGDLGEKGPEGAAGKDGARGLTGPIGPPGPGGPNGEKGESGPAGPSGAPGTRGA 754

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PGD G+ GP G  G+ G  G DG+ G  GE    G PG+ G  G PG     G  G PG 
Sbjct: 755 PGDRGETGPPGPAGFAGPPGADGQPGTKGE---QGEPGQKGEAGAPGPQ---GPSGAPGP 808

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G  G RG +G  G  G PG 
Sbjct: 809 AGPTGVSGPKGARGAQGPPGATGFPGA 835



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 88/212 (41%), Gaps = 57/212 (26%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
           QG      E   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 785 QGEPGQKGEAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPPGP 844

Query: 150 -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPG---DEGKRGPKGDMGY 189
                            P+G+ GD G  G +GD G  GP G PG   D G+ GP G  G 
Sbjct: 845 NGNPGPAGPAGPPGKDGPKGVRGDPGPAGRQGDAGLRGPAGAPGEKGDAGEDGPNGPSGP 904

Query: 190 PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKD----------------------- 223
            G  GL G+ G   LPG+ G  G PG  G  G PGK                        
Sbjct: 905 SGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGPGDRGPPGPVGPPGLTGP 964

Query: 224 -GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G PG++G PG++G  G  G  G +G+RG +G
Sbjct: 965 AGEPGREGNPGSDGPPGRDGSAGIKGDRGNTG 996



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 78/181 (43%), Gaps = 45/181 (24%)

Query: 106 TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------------- 143
           T    P G  GP G  G+ G KGE G  G++GE GAPG                      
Sbjct: 761 TGPPGPAGFAGPPGADGQPGTKGEQGEPGQKGEAGAPGPQGPSGAPGPAGPTGVSGPKGA 820

Query: 144 --VVGPPGPQGIPGDEG---------------------KRGPKGDMGYPGPQGIPGDEGK 180
               GPPG  G PG  G                     K GPKG  G PGP G  GD G 
Sbjct: 821 RGAQGPPGATGFPGAAGRVGPPGPNGNPGPAGPAGPPGKDGPKGVRGDPGPAGRQGDAGL 880

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           RGP G  G  G  G DG +G  G  G  G+ G+ G+ G+PG+ G  G  G+PG +G  G+
Sbjct: 881 RGPAGAPGEKGDAGEDGPNGPSGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGK 940

Query: 241 K 241
           +
Sbjct: 941 Q 941



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 86/203 (42%), Gaps = 57/203 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMG- 167
           PG++G  G  G  GAKGE G  G +GE GAPG  G PGP   +G+PG+ G+ G  G  G 
Sbjct: 218 PGIKGHRGYPGLDGAKGETGAVGAKGEAGAPGESGAPGPMGPRGLPGERGRPGSTGAAGA 277

Query: 168 -----------------------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                                  +PG    PG +G+ GP G  G  G  G  G  G PG 
Sbjct: 278 RGNDGLPGPAGPPGPVGPAGAPGFPG---SPGSKGEAGPTGARGPEGAQGPRGESGTPGS 334

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIP---------------------GTNGTNGE--- 240
           PG  G  G  G DGIPG  G  G  GI                      G  GT+G+   
Sbjct: 335 PGPSGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGI 394

Query: 241 ---KGMTGPRGNRGKSGINGVPG 260
              KG  GP+G  G  G+ G PG
Sbjct: 395 AGFKGEAGPKGEIGPPGLQGAPG 417



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 80/186 (43%), Gaps = 51/186 (27%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDMGYPG 170
           E G  G  G  G RG  G  G  GPPGP G              G++G+ G KG+ G PG
Sbjct: 739 ESGPAGPSGAPGTRGAPGDRGETGPPGPAGFAGPPGADGQPGTKGEQGEPGQKGEAGAPG 798

Query: 171 PQ---GIP------------GDEGKRGPKGDMGYPGRIGL-------------------- 195
           PQ   G P            G  G +GP G  G+PG  G                     
Sbjct: 799 PQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPAGPAGPPG 858

Query: 196 -DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            DG  G+ G+PG     GR G  G+ G  G PG+ G  G +G NG  G +GP+G  G+ G
Sbjct: 859 KDGPKGVRGDPGPA---GRQGDAGLRGPAGAPGEKGDAGEDGPNGPSGPSGPQGLAGQRG 915

Query: 255 INGVPG 260
           I G+PG
Sbjct: 916 IVGLPG 921



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 70/168 (41%), Gaps = 23/168 (13%)

Query: 56  PHVEFVPPDLYEEIREREKEQQNSTHNNPWVW--LNAYSRIPLVAMQGFCNS---TKEYC 110
           P  E  PP L      + +E +      P     L           +GF        +  
Sbjct: 403 PKGEIGPPGLQGAPGPQGEEGKRGPRGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGQKG 462

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGK-------- 159
            PG +GP G  G  GA G+ G  GE G  GA G+ G PG   PQG  G  G         
Sbjct: 463 APGERGPPGASGAKGATGDPGRPGESGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPG 522

Query: 160 -------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                  RG  G MG+PGP+G  G+ GK G KG +G PG  GL G+DG
Sbjct: 523 PPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGLLGAPGLRGLPGKDG 570



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 82/215 (38%), Gaps = 57/215 (26%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK-------------------- 139
           QG      E    G+ GP G +G++G KG  G  G+ G +                    
Sbjct: 680 QGLQGMPGERGAAGIPGPKGDRGDLGEKGPEGAAGKDGARGLTGPIGPPGPGGPNGEKGE 739

Query: 140 -------GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                  GAPG       +G PGD G+ GP G  G+ GP G  G  G +G +G+ G  G 
Sbjct: 740 SGPAGPSGAPGT------RGAPGDRGETGPPGPAGFAGPPGADGQPGTKGEQGEPGQKGE 793

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT------------------ 234
            G  G  G  G PG  G  G +G  G  G  G PG  G PG                   
Sbjct: 794 AGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPAGP 853

Query: 235 ------NGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                 +G  G +G  GP G +G +G+ G  G P 
Sbjct: 854 AGPPGKDGPKGVRGDPGPAGRQGDAGLRGPAGAPG 888



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 62/142 (43%), Gaps = 30/142 (21%)

Query: 152 GIPGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G PG  G+RGP   +G  G+PG  G+PG +G RG  G  G  G  G  G  G  G PG  
Sbjct: 192 GKPGKSGERGPSGPQGARGFPGTPGLPGIKGHRGYPGLDGAKGETGAVGAKGEAGAPGES 251

Query: 209 GIPGRNGMDGIPGKDGLPGKDG---------------------------IPGTNGTNGEK 241
           G PG  G  G+PG+ G PG  G                            PG+ G+ GE 
Sbjct: 252 GAPGPMGPRGLPGERGRPGSTGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGSPGSKGEA 311

Query: 242 GMTGPRGNRGKSGINGVPGTPA 263
           G TG RG  G  G  G  GTP 
Sbjct: 312 GPTGARGPEGAQGPRGESGTPG 333



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 90/228 (39%), Gaps = 61/228 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G  GP G +G  G  G  G+KG RG       KG  G VG  G  G PG+ G  GP G  
Sbjct: 201 GPSGPQGARGFPGTPGLPGIKGHRGYPGLDGAKGETGAVGAKGEAGAPGESGAPGPMGPR 260

Query: 167 GYPGPQGIPGDEGKRGPKGD---------------------MGYPGRIGLDGRDGLPGEP 205
           G PG +G PG  G  G +G+                      G PG  G  G  G  G  
Sbjct: 261 GLPGERGRPGSTGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGSPGSKGEAGPTGARGPE 320

Query: 206 GLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGM------------------T 244
           G  G  G +G  G PG  G    PG DGIPG  G+ G  G+                  T
Sbjct: 321 GAQGPRGESGTPGSPGPSGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGAT 380

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGS 292
           GP G +G S      G P I  +K E+    P  E    + PP + G+
Sbjct: 381 GPLGPKGTS------GDPGIAGFKGEAG---PKGE----IGPPGLQGA 415



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 72/162 (44%), Gaps = 18/162 (11%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            G+ G+ G +G  G +G RG  G PG+ G  G +G PG +G +G  G +G  G  G PG+
Sbjct: 191 AGKPGKSGERGPSGPQGARGFPGTPGLPGIKGHRGYPGLDGAKGETGAVGAKGEAGAPGE 250

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------------------GIPGRNGMDGI 219
            G  GP G  G PG  G  G  G  G  G D                  G PG  G  G 
Sbjct: 251 SGAPGPMGPRGLPGERGRPGSTGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGSPGSKGE 310

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G +G  G  G +G  G  GP G  G  G +G+PG 
Sbjct: 311 AGPTGARGPEGAQGPRGESGTPGSPGPSGASGNPGTDGIPGA 352



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 90/227 (39%), Gaps = 63/227 (27%)

Query: 116  GPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDE------GKRGPKGDM 166
            GP G++G+ G +G  G  GE+G   E G  G  GP GPQG+ G        G+RG +G  
Sbjct: 870  GPAGRQGDAGLRGPAGAPGEKGDAGEDGPNGPSGPSGPQGLAGQRGIVGLPGQRGERGFP 929

Query: 167  GYPGPQGIPGDE---------------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G PGP G PG +               G  G  G  G PGR G  G DG PG  G  GI 
Sbjct: 930  GLPGPSGEPGKQGAPGGPGDRGPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGSAGIK 989

Query: 212  GRNGMDGI---------------------PGKDGLPGKDGIPGTNGTNGEKGMTGP---- 246
            G  G  G                       G  G PG  G  G +G  G +GM GP    
Sbjct: 990  GDRGNTGPVGASGAPGAPGAPGPVGPTGKQGDRGEPGPQGPAGPSGPAGARGMPGPQGPR 1049

Query: 247  --------------RGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
                          +G+RG +G+ G+PG P     +  +    P  +
Sbjct: 1050 GDKGEAGEGGERGQKGHRGFTGLQGLPGPPGQAGDQGATGPAGPAGQ 1096



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 91/241 (37%), Gaps = 81/241 (33%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG-------------------- 137
            + G   +  E  PPG  G  G  G+ G  GE G+ G RG                    
Sbjct: 456 GLAGQKGAPGERGPPGASGAKGATGDPGRPGESGLPGARGLTGRPGDAGPQGKVGPSGAP 515

Query: 138 -------------EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP- 183
                         +G PGV+G PGP+G  G+ GK G KG +G PG +G+PG +G+ G  
Sbjct: 516 GEDGRPGPPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGLLGAPGLRGLPGKDGETGSA 575

Query: 184 -----------KGDMGYPG---------------------------------RIGLDGRD 199
                      +G+ G PG                                   G  G  
Sbjct: 576 GPPGPAGPAGERGEQGQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGATGPRGER 635

Query: 200 GLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G PGE    G  G+ G  G+ G PG DG  G  G  G+ G  G +G+ G  G RG +GI 
Sbjct: 636 GFPGERGPAGPQGLQGPRGLPGTPGTDGPKGAIGPAGSRGAQGPQGLQGMPGERGAAGIP 695

Query: 257 G 257
           G
Sbjct: 696 G 696



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 87/239 (36%), Gaps = 90/239 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAP------------GVVGPPGP---------------- 150
           G+KG +GA G  G+ G+ GE G+             G  G PGP                
Sbjct: 552 GEKGLLGAPGLRGLPGKDGETGSAGPPGPAGPAGERGEQGQPGPSGFQGLPGPPGPPGEG 611

Query: 151 -----------------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
                                  +G PG+   RGP G  G  GP+G+PG  G  GPKG +
Sbjct: 612 GKPGDQGVPGEAGAAGATGPRGERGFPGE---RGPAGPQGLQGPRGLPGTPGTDGPKGAI 668

Query: 188 GYPGRIGLDGRDGL---PGEPGLDGIP---------GRNGMDGIPGKDGL---------- 225
           G  G  G  G  GL   PGE G  GIP         G  G +G  GKDG           
Sbjct: 669 GPAGSRGAQGPQGLQGMPGERGAAGIPGPKGDRGDLGEKGPEGAAGKDGARGLTGPIGPP 728

Query: 226 --------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                          G  G PGT G  G++G TGP G  G +G  G  G P     + E
Sbjct: 729 GPGGPNGEKGESGPAGPSGAPGTRGAPGDRGETGPPGPAGFAGPPGADGQPGTKGEQGE 787



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 77/197 (39%), Gaps = 69/197 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------KGDM 166
           GQ G +G  G  G  GE G+ G  G++G PG +G+PG +G+ G             +G+ 
Sbjct: 531 GQPGVMGFPGPKGATGEPGKSGEKGLLGAPGLRGLPGKDGETGSAGPPGPAGPAGERGEQ 590

Query: 167 GYPGP---------------------------------------QGIPGDEGKRGPKGDM 187
           G PGP                                       +G PG+ G  GP+G  
Sbjct: 591 GQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGATGPRGERGFPGERGPAGPQG-- 648

Query: 188 GYPGRIGLDGRDGLPGEPGLD------GIPGRNGMDGIPGKDGLPGK---DGIPGTNGTN 238
                  L G  GLPG PG D      G  G  G  G  G  G+PG+    GIPG  G  
Sbjct: 649 -------LQGPRGLPGTPGTDGPKGAIGPAGSRGAQGPQGLQGMPGERGAAGIPGPKGDR 701

Query: 239 GEKGMTGPRGNRGKSGI 255
           G+ G  GP G  GK G 
Sbjct: 702 GDLGEKGPEGAAGKDGA 718


>gi|358410841|ref|XP_003581846.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-2(V) chain [Bos
           taurus]
          Length = 1606

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGVQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 90/182 (49%), Gaps = 9/182 (4%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKG 164
           PPG++G  G  G  G KGE G KGE G  G  G +GPPG      P+G PG  G  GP G
Sbjct: 460 PPGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPVG 519

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           + G PG +G PG +G  GPKG  G  G +G  G  G  G+PG  G PG  G  G+ G  G
Sbjct: 520 ERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPG 579

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLL 284
           + G +G  G  G  GE G  GP G+    GI G PG+  +   K  S       E     
Sbjct: 580 VQGPEGKLGPLGAPGEDGRPGPPGS---IGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAG 636

Query: 285 IP 286
           +P
Sbjct: 637 VP 638



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 89/207 (42%), Gaps = 54/207 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQG---------PIGQKGEIGAKGEMGVKGERGEKGAPGV---- 144
            M+G    T    P G QG         P+G +G  GA G  G  G +G  G+PG     
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGPTGSPGTSGPP 443

Query: 145 --------------VGPPGPQGIPGDEGKRGPKGDMG---YPGPQGI------PGDEGKR 181
                          GPPG +G PGD G  G KG+ G    PGP G+      PG+EGKR
Sbjct: 444 GLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKR 503

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP+GD                  PG  G PG  G  G PG  G PG DG+PG  G  GE+
Sbjct: 504 GPRGD------------------PGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGER 545

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G +G  G  G PG P +   +
Sbjct: 546 GPVGSSGPKGGQGDPGRPGEPGLPGAR 572



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 77/169 (45%), Gaps = 21/169 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G  GE G  G  G  G+RG  G PG  GP GP GIPG  G  G  G  G  GP 
Sbjct: 333 GPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGPT 392

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG----------- 221
           G  G EG +G +G+ G PG +   G  GLPG  G DG PG  G  G PG           
Sbjct: 393 GARGPEGPQGQRGETGPPGPV---GSQGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPP 449

Query: 222 -------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                    G PG  G PG  G  G KG  GP+G  G  G+ G  G P 
Sbjct: 450 GSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPG 498



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 78/145 (53%), Gaps = 6/145 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G  G +G  G  
Sbjct: 267 GEPGRNGKPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPT 326

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G +G  GP+G RG++G  G
Sbjct: 387 GEAGPTGARGPEGPQGQRGETGPPG 411



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G  G +G+ GP 
Sbjct: 267 GEPGRNGKPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPT 326

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTN 238
           G MG  G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  
Sbjct: 327 GPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMK 386

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPA 263
           GE G TG RG  G  G  G  G P 
Sbjct: 387 GEAGPTGARGPEGPQGQRGETGPPG 411



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 86/160 (53%), Gaps = 18/160 (11%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------GIPGDEGKRG 161
           LQG  G++G  G  G  G +G  GEKGA G  G  G +            G  G++G+ G
Sbjct: 760 LQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPSGPTGEKGEPG 819

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           P+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG    PG+ G  G PG
Sbjct: 820 PRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE---PGQKGDAGSPG 876

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 877 PQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 70/145 (48%), Gaps = 27/145 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------------------ERGEKGAPGVVGPPGPQ 151
           G  GP G +G IG KG  G  G                     E+GE G  G+VGPPG +
Sbjct: 771 GTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPSGPTGEKGEPGPRGLVGPPGSR 830

Query: 152 GIPGDEGKRGPKGDMGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G PG  G+ GP G +G+ GPQ      G+ G+ G+ G KGD G PG  GL G  G  G  
Sbjct: 831 GNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPN 890

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDG 230
           G+ G+ G  G  G PG  G PG  G
Sbjct: 891 GVPGLKGGRGTQGPPGATGFPGSAG 915



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 85/198 (42%), Gaps = 33/198 (16%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------ 150
           V   G         P G  GP+G +G  G +G +G +G  G++GA G+ G PGP      
Sbjct: 314 VGATGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGI 373

Query: 151 ---QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
               G PG+ G +G  G  G  GP+G  G  G+ GP G +G  G  G  G DG PG  G 
Sbjct: 374 PGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGP 433

Query: 208 DGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR----- 247
            G PG                 G  G PG  G PG  G+PG  G  G KG  GP      
Sbjct: 434 TGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGP 493

Query: 248 ----GNRGKSGINGVPGT 261
               G  GK G  G PGT
Sbjct: 494 IGPPGEEGKRGPRGDPGT 511



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 169 PGPQGIPGDEGK------------RGPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEAGKPGDQGV 697

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           PG+PG  G  G  G  G PG+ G PG  G+P      GEKGM G
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLP------GEKGMAG 735



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 85/202 (42%), Gaps = 60/202 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
            G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816  GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
            GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876  GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929

Query: 216  -MDGIPGKDGLPGKDGIPGTNG------------------------------------TN 238
               G PGK+G PG  G PG++G                                    T 
Sbjct: 930  GPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTT 989

Query: 239  GEKGMTGPRGNRGKSGINGVPG 260
            G++G+ G  G RG+ G+ G+PG
Sbjct: 990  GQRGIVGMPGQRGERGMPGLPG 1011



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 70/152 (46%), Gaps = 2/152 (1%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G PG  G PG+ G  G  G  G+PG  G+PG +G RG KG  G  G +G  G  G  G  
Sbjct: 267 GEPGRNGKPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPT 326

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
           G  G  G  G  G+PG+ G  G  G PG  G +G  G  GP G  G  G  G PG P + 
Sbjct: 327 GPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMK 386

Query: 266 AYKRESCSLLPNSETSQL--LIPPTIVGSEHI 295
                + +  P     Q     PP  VGS+ +
Sbjct: 387 GEAGPTGARGPEGPQGQRGETGPPGPVGSQGL 418



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 70/150 (46%), Gaps = 36/150 (24%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------------KGD 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP                   G 
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGAPGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            +G PGP+         GP G+ G PGR G  G  G  G+PG  G+PG  G  G PG  G 
Sbjct: 1043 VGEPGPE---------GPAGNDGTPGRDGAVGERGDRGDPGXAGLPGSQGAPGTPGPVGA 1093

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            PG     G  G  G +G  GP G  GK G+
Sbjct: 1094 PGDA---GQRGDPGSRGPIGPPGRAGKRGL 1120



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 89/233 (38%), Gaps = 84/233 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP    G+PG +G R   GP G  
Sbjct: 849  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 908

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 909  GFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 968

Query: 194  ---------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
                                 G  G  G+PG+ G  G+PG  G  G PGK G        
Sbjct: 969  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGAPGDK 1028

Query: 226  -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                             PG +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 1029 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGXAGLPGS 1081



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 86/205 (41%), Gaps = 66/205 (32%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK----------- 159
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 601 PPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 660

Query: 160 -RGPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PGD G     GP+G+ G PG   
Sbjct: 661 LAGERGEQGPPGPTGFQGLPGPPGPPGEAGKPGDQGVPGDPGAVGPLGPRGERGNPGER- 719

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDG---------------------IPGKDGLPGKDGIPG 233
                   GEPG+ G+PG  GM G                      PG  G+PG+ GI G
Sbjct: 720 --------GEPGITGLPGEKGMAGGHGPDGPKGSPGPPGTPGDTGPPGLQGMPGERGIAG 771

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGV 258
           T G  G++G  G +G  G +G +G 
Sbjct: 772 TPGPKGDRGGIGEKGAEGTAGNDGA 796



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 80/197 (40%), Gaps = 63/197 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 886  PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 946  DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1005

Query: 228  KDGIPGTNGTNGEKGMT 244
              G+PG  GT G+ G T
Sbjct: 1006 MPGLPGPAGTPGKVGPT 1022



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 208 DGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           DG PGRN      G  G PG  G PG  G+PG  G  G KG+ GP+G  G +G  G
Sbjct: 266 DGEPGRNGKPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKG 321



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 87/247 (35%), Gaps = 99/247 (40%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGIP---GDEGKRGPK 163
            G  GP G  G+ G KGE G  G++G+ G+PG        GP GP G+P   G  G +GP 
Sbjct: 846  GFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPP 905

Query: 164  ------------------------------GDMGYPGPQGIPGDEGK------------- 180
                                          G  G PG +G PG  G+             
Sbjct: 906  GATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGP 965

Query: 181  -----------------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
                                    G +G +G PG+    G  G+PG PG  G PG+ G  
Sbjct: 966  GDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQ---RGERGMPGLPGPAGTPGKVGPT 1022

Query: 218  ---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                                 G PG +G  G DG PG +G  GE+G  G  G  G  G  
Sbjct: 1023 GAPGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGXAGLPGSQ 1082

Query: 257  GVPGTPA 263
            G PGTP 
Sbjct: 1083 GAPGTPG 1089


>gi|3242649|dbj|BAA29028.1| alpha 1 type I collagen [Rana catesbeiana]
          Length = 1445

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 82/168 (48%), Gaps = 18/168 (10%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           P G  GP G  G+ GAKGE G  G +G+ G PG  GP   PGP G  G  G +G +G  G
Sbjct: 795 PAGFAGPPGADGQPGAKGEQGDAGPKGDAGPPGAAGPTGAPGPAGAVGATGPKGARGPAG 854

Query: 168 YPGPQGIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            PG  G PG  G+ GP G                 G  G  G  G  G PGEPG  G PG
Sbjct: 855 PPGSTGFPGAAGRVGPPGPSGNAGPPGPSGPAGKEGQKGPRGETGPAGRPGEPGAAGPPG 914

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +G  G PG DG  G  GIPG  G  G +G  G  G RG+ G  G+PG
Sbjct: 915 PSGEKGSPGSDGPAGAPGIPGPQGIAGTRGTVGLPGQRGERGFPGLPG 962



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 81/165 (49%), Gaps = 21/165 (12%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------VGPPGP 150
           QG      +  PPG  GP G  G  GA G  G KG RG  G PG          VGPPGP
Sbjct: 814 QGDAGPKGDAGPPGAAGPTGAPGPAGAVGATGPKGARGPAGPPGSTGFPGAAGRVGPPGP 873

Query: 151 QG---------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            G           G EG++GP+G+ G   P G PG+ G  GP G  G  G  G DG  G 
Sbjct: 874 SGNAGPPGPSGPAGKEGQKGPRGETG---PAGRPGEPGAAGPPGPSGEKGSPGSDGPAGA 930

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
           PG PG  GI G  G  G+PG+ G  G  G+PG  G  G++G +GP
Sbjct: 931 PGIPGPQGIAGTRGTVGLPGQRGERGFPGLPGPTGEPGKQGSSGP 975



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 81/173 (46%), Gaps = 36/173 (20%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------------ 165
           +G  G  G+ GE G  GE G  GA G+ G P   G PG +GK GP G             
Sbjct: 499 VGSAGPKGSPGESGRPGEPGLPGAKGLTGSP---GSPGPDGKTGPAGAPGQDGRPGPPGP 555

Query: 166 ---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------------LPGE 204
                    MG+PGP+G  G+ GK G +G  G PG +G  G+DG              GE
Sbjct: 556 PGARGQSGVMGFPGPKGAAGEPGKPGERGVAGPPGAVGAPGKDGEAGAQGPPGPAGPAGE 615

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G  G  G+PG  G PG+ G PG  G  G+ G +GP G+RG+ G  G
Sbjct: 616 RGEQGPAGPPGFQGLPGSPGAPGESGKPGEQGAPGDVGPSGPAGSRGERGFPG 668



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 79/188 (42%), Gaps = 39/188 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG---------------------EKGAPGVVGPPGPQ 151
           GL G  G +G+ G KG  G  G+ G                     E G  G  GP G +
Sbjct: 722 GLPGAKGDRGDQGPKGADGAPGKDGVRGLTGPIGPPGPGGAPGDKGEAGPAGPAGPTGSR 781

Query: 152 GIPGDEGKRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G PG+ G+ GP G  G+ GP       G  G++G  GPKGD G PG  G  G  G  G  
Sbjct: 782 GAPGERGEPGPSGPAGFAGPPGADGQPGAKGEQGDAGPKGDAGPPGAAGPTGAPGPAGAV 841

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG------------EKGMTGPRGNRGKS 253
           G  G  G  G  G PG  G PG  G  G  G +G            ++G  GPRG  G +
Sbjct: 842 GATGPKGARGPAGPPGSTGFPGAAGRVGPPGPSGNAGPPGPSGPAGKEGQKGPRGETGPA 901

Query: 254 GINGVPGT 261
           G  G PG 
Sbjct: 902 GRPGEPGA 909



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 72/166 (43%), Gaps = 27/166 (16%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------------ 160
           G  GE GA G  G KG+RG++G      P G  G PG +G R                  
Sbjct: 713 GMPGERGAGGLPGAKGDRGDQG------PKGADGAPGKDGVRGLTGPIGPPGPGGAPGDK 766

Query: 161 ---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
              GP G  G  G +G PG+ G+ GP G  G+ G  G DG+ G  GE G  G  G  G  
Sbjct: 767 GEAGPAGPAGPTGSRGAPGERGEPGPSGPAGFAGPPGADGQPGAKGEQGDAGPKGDAGPP 826

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G PG  G  G  G  G +G  GP G+ G  G  G  G P 
Sbjct: 827 GAAGPTGAPGPAGAVGATGPKGARGPAGPPGSTGFPGAAGRVGPPG 872



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 72/176 (40%), Gaps = 39/176 (22%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  PPG QG  G  G  G  G  G +G  G  GA G  GP GP+G PG+ G+ G  G + 
Sbjct: 228 ERGPPGPQGARGLPGTAGLPGMKGHRGFNGLDGAKGDTGPAGPKGEPGNPGENGAPGQV- 286

Query: 168 YPGPQGIPGDEGKRGPKG------------------------------------DMGYPG 191
             GP+G+PG+ G+ GP G                                    D G  G
Sbjct: 287 --GPRGLPGERGRPGPSGPAGARGNDGTPGAAGPPGPTGPTGPPGFPGGVGPKGDAGPQG 344

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
             G DG  G  GEPG  G  G  G  G PG DG PG  G  G  G  G  G  G R
Sbjct: 345 SRGPDGPQGARGEPGAPGQAGPAGSAGNPGTDGQPGAKGATGAPGIAGAPGFPGAR 400



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 54/108 (50%), Gaps = 12/108 (11%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  GE G+ G PG  GPPGPQG              G PG  G+PG +G RG  G  G  
Sbjct: 215 GEDGEAGKPGRPGERGPPGPQGA------------RGLPGTAGLPGMKGHRGFNGLDGAK 262

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G  G  G  G PG PG +G PG+ G  G+PG+ G PG  G  G  G +
Sbjct: 263 GDTGPAGPKGEPGNPGENGAPGQVGPRGLPGERGRPGPSGPAGARGND 310



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 79/179 (44%), Gaps = 36/179 (20%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---------------GDEGKRGP 162
           +G  G  GA GE G  GERG  G PG VG PG  G                 G++G  GP
Sbjct: 565 MGFPGPKGAAGEPGKPGERGVAGPPGAVGAPGKDGEAGAQGPPGPAGPAGERGEQGPAGP 624

Query: 163 KGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGM 216
            G  G PG  G PG+ GK   +G  GD+G  G  G  G  G PGE G     G  G  G 
Sbjct: 625 PGFQGLPGSPGAPGESGKPGEQGAPGDVGPSGPAGSRGERGFPGERGAIGPPGPQGPRGA 684

Query: 217 DGIPGKDGLPGK---------------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G PG DG  G+                G+PG  G  G  G  G RG++G  G +G PG
Sbjct: 685 NGAPGNDGAKGEAGAPGAPGGQGPSGLQGMPGERGAGGLPGAKGDRGDQGPKGADGAPG 743



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 87/248 (35%), Gaps = 99/248 (39%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------------------VVGPP 148
           G  GP G  GE G  GE GV G  G  GAPG                          GPP
Sbjct: 566 GFPGPKGAAGEPGKPGERGVAGPPGAVGAPGKDGEAGAQGPPGPAGPAGERGEQGPAGPP 625

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGL---------- 195
           G QG+PG  G     G+ G PG QG PGD G  GP   +G+ G+PG  G           
Sbjct: 626 GFQGLPGSPGA---PGESGKPGEQGAPGDVGPSGPAGSRGERGFPGERGAIGPPGPQGPR 682

Query: 196 --------DGR------------------DGLPGEPGLDGIPGRNG---------MDGIP 220
                   DG                    G+PGE G  G+PG  G          DG P
Sbjct: 683 GANGAPGNDGAKGEAGAPGAPGGQGPSGLQGMPGERGAGGLPGAKGDRGDQGPKGADGAP 742

Query: 221 GKDGL------------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           GKDG+                         G  G  G+ G  GE+G  GP G  G +G  
Sbjct: 743 GKDGVRGLTGPIGPPGPGGAPGDKGEAGPAGPAGPTGSRGAPGERGEPGPSGPAGFAGPP 802

Query: 257 GVPGTPAI 264
           G  G P  
Sbjct: 803 GADGQPGA 810



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK- 252
           G DG  G PG PG  G PG  G  G+PG  GLPG  G  G NG +G KG TGP G +G+ 
Sbjct: 215 GEDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFNGLDGAKGDTGPAGPKGEP 274

Query: 253 --SGINGVPG 260
              G NG PG
Sbjct: 275 GNPGENGAPG 284



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 63/164 (38%), Gaps = 36/164 (21%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI--------------- 174
            G+ GERG  G PG  G         D G +GPKG  G PG  G+               
Sbjct: 712 QGMPGERGAGGLPGAKG---------DRGDQGPKGADGAPGKDGVRGLTGPIGPPGPGGA 762

Query: 175 ------PGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-- 223
                  G  G  GP G  G P   G  G  G  G  G PG DG PG  G  G  G    
Sbjct: 763 PGDKGEAGPAGPAGPTGSRGAPGERGEPGPSGPAGFAGPPGADGQPGAKGEQGDAGPKGD 822

Query: 224 -GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G PG  G  G  G  G  G TGP+G RG +G  G  G P    
Sbjct: 823 AGPPGAAGPTGAPGPAGAVGATGPKGARGPAGPPGSTGFPGAAG 866



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 75/193 (38%), Gaps = 54/193 (27%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDMGYPGPQG 173
           + GE G  G+ G  GERG  G  G  G PG  G+PG +G RG       KGD G  GP+G
Sbjct: 213 KNGEDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFNGLDGAKGDTGPAGPKG 272

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL-------------------------- 207
            PG+ G+ G  G +G  G  G  GR G  G  G                           
Sbjct: 273 EPGNPGENGAPGQVGPRGLPGERGRPGPSGPAGARGNDGTPGAAGPPGPTGPTGPPGFPG 332

Query: 208 ----------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                           DG  G  G  G PG+ G  G  G PGT+G  G KG T      G
Sbjct: 333 GVGPKGDAGPQGSRGPDGPQGARGEPGAPGQAGPAGSAGNPGTDGQPGAKGAT------G 386

Query: 252 KSGINGVPGTPAI 264
             GI G PG P  
Sbjct: 387 APGIAGAPGFPGA 399



 Score = 43.1 bits (100), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 72/184 (39%), Gaps = 60/184 (32%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------------- 147
           G  GP G  GE G  GE G+ G +G  G+PG  GP                         
Sbjct: 500 GSAGPKGSPGESGRPGEPGLPGAKGLTGSPGSPGPDGKTGPAGAPGQDGRPGPPGPPGAR 559

Query: 148 --------PGPQGI------PGDEGKRGPKGDMGYPGPQG---------IPGDEGKRGPK 184
                   PGP+G       PG+ G  GP G +G PG  G           G  G+RG +
Sbjct: 560 GQSGVMGFPGPKGAAGEPGKPGERGVAGPPGAVGAPGKDGEAGAQGPPGPAGPAGERGEQ 619

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G PG  GL G  G PGE             G PG+ G PG  G  G  G+ GE+G  
Sbjct: 620 GPAGPPGFQGLPGSPGAPGE------------SGKPGEQGAPGDVGPSGPAGSRGERGFP 667

Query: 245 GPRG 248
           G RG
Sbjct: 668 GERG 671



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 50/98 (51%), Gaps = 27/98 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
            PG+ GP   +G  G +G +G+ G+RGE+G PG+   PGP G PG +G  GP G+      
Sbjct: 931  PGIPGP---QGIAGTRGTVGLPGQRGERGFPGL---PGPTGEPGKQGSSGPSGERGPPGP 984

Query: 167  ----------------GYPGPQGIPGDEGKRGPKGDMG 188
                            G PG +G PG +G  GPKGD G
Sbjct: 985  SGPPGLAGPPGEPGREGSPGSEGSPGRDGSAGPKGDRG 1022


>gi|345324033|ref|XP_001512379.2| PREDICTED: collagen alpha-1(XVII) chain isoform 1 [Ornithorhynchus
           anatinus]
          Length = 1479

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 66/115 (57%), Gaps = 3/115 (2%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KGE G  G  G KG++GEKG  G+ G PG +G+PG  G+ G KG MG  GP G    +
Sbjct: 698 GAKGEKGPMGSPGPKGDQGEKGPRGLTGEPGSKGLPGATGEPGAKGAMGPAGPDG---HQ 754

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
           G RG +G  G PG  G  G  G  G+PGL G  G  G+ GIPG+ G  G  G PG
Sbjct: 755 GPRGEQGLTGMPGLRGPPGPTGDAGKPGLTGPQGPTGLPGIPGRAGAKGDAGAPG 809



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KG+ G+ G +GEKG    +G PGP+G   D+G++GP+G  G PG +G+PG  G+ G KG 
Sbjct: 691 KGDTGLPGAKGEKGP---MGSPGPKG---DQGEKGPRGLTGEPGSKGLPGATGEPGAKGA 744

Query: 187 MGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           MG     G  G  G  GL G PGL G PG  G  G PG  G  G  G+PG  G  G KG 
Sbjct: 745 MGPAGPDGHQGPRGEQGLTGMPGLRGPPGPTGDAGKPGLTGPQGPTGLPGIPGRAGAKGD 804

Query: 244 TGPRG 248
            G  G
Sbjct: 805 AGAPG 809



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 9/115 (7%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  G+PG +G++GP   MG PGP+   GD+G++GP+G  G PG  GL G  G PG  G  
Sbjct: 692 GDTGLPGAKGEKGP---MGSPGPK---GDQGEKGPRGLTGEPGSKGLPGATGEPGAKGAM 745

Query: 209 GIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G +G  G  G+ GL   PG  G PG  G  G+ G+TGP+G  G  GI G  G
Sbjct: 746 GPAGPDGHQGPRGEQGLTGMPGLRGPPGPTGDAGKPGLTGPQGPTGLPGIPGRAG 800



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 60/112 (53%), Gaps = 9/112 (8%)

Query: 113 GLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDM 166
           G +GP+G    KG+ G KG  G+ GE G KG PG  G PG +G     G +G +GP+G+ 
Sbjct: 701 GEKGPMGSPGPKGDQGEKGPRGLTGEPGSKGLPGATGEPGAKGAMGPAGPDGHQGPRGEQ 760

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           G     G+PG  G  GP GD G PG  G  G  GLPG PG  G  G  G  G
Sbjct: 761 GL---TGMPGLRGPPGPTGDAGKPGLTGPQGPTGLPGIPGRAGAKGDAGAPG 809



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 50/95 (52%), Gaps = 9/95 (9%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKG 164
           E  P GL G  G KG  GA GE G KG  G  G  G  GP G QG+   PG  G  GP G
Sbjct: 717 EKGPRGLTGEPGSKGLPGATGEPGAKGAMGPAGPDGHQGPRGEQGLTGMPGLRGPPGPTG 776

Query: 165 DMGYP------GPQGIPGDEGKRGPKGDMGYPGRI 193
           D G P      GP G+PG  G+ G KGD G PGRI
Sbjct: 777 DAGKPGLTGPQGPTGLPGIPGRAGAKGDAGAPGRI 811



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 93/239 (38%), Gaps = 61/239 (25%)

Query: 81  HNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGE---MGVKG 134
           H+   VWL   +++     +G+     E  P G   +QGP G +G  G  G    MG  G
Sbjct: 546 HSQEAVWLYVRNKLQSEQEKGYFRG--EPGPKGDVGIQGPRGDRGFAGVPGTPGPMGHPG 603

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGP-------------------------------- 162
             G KG  G VG PG +G  G  G+ GP                                
Sbjct: 604 PEGPKGQKGSVGQPGLEGTMGQRGREGPAGPRGEPGPPGFGEKGDKGAVGEPGPPGPPGV 663

Query: 163 ------KGDM---------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                 KG M               G+ G  G+PG +G++GP G  G  G  G  G  GL
Sbjct: 664 PGSFGPKGAMGTPGPLGPSGPPGIPGFKGDTGLPGAKGEKGPMGSPGPKGDQGEKGPRGL 723

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GEPG  G+PG  G  G  G  G  G DG  G  G  G  GM G RG  G +G  G PG
Sbjct: 724 TGEPGSKGLPGATGEPGAKGAMGPAGPDGHQGPRGEQGLTGMPGLRGPPGPTGDAGKPG 782


>gi|18157524|dbj|BAB83839.1| COL11A2 [Oryzias latipes]
          Length = 1827

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 84/158 (53%), Gaps = 12/158 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGD 165
           PG QG  G +G IG  GE G  G+ G  G PG  GPPG      P G  G++G  GP+G 
Sbjct: 734 PGTQGMPGPQGAIGPHGEKGPTGKPGLPGMPGADGPPGHPGKEGPPGTKGNQGPNGPQGA 793

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +GYPGP+GI G +G RG KG  G        G DG PG  G  G+ G  G  G+PG  G 
Sbjct: 794 IGYPGPRGIKGAQGIRGLKGHKGE------KGEDGFPGIKGDFGVKGERGEAGLPGPRGE 847

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G +G  G  G  GE G  G  G +GK G+ G+PG P 
Sbjct: 848 DGPEGPKGRVGPPGEIGPIGTVGEKGKLGVPGLPGYPG 885



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/160 (44%), Positives = 85/160 (53%), Gaps = 15/160 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QG IG  G  G KG  G++G +G KG  G  G PG   I GD G +G +G+ G PG
Sbjct: 787 PNGPQGAIGYPGPRGIKGAQGIRGLKGHKGEKGEDGFPG---IKGDFGVKGERGEAGLPG 843

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIG---LDGRDGLPGEPGLDGIPGRNG------MDGIPG 221
           P+G   ++G  GPKG +G PG IG     G  G  G PGL G PGR G        G PG
Sbjct: 844 PRG---EDGPEGPKGRVGPPGEIGPIGTVGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPG 900

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            +G  G  G+ G  G  G++G TGPRG RG  G  G  G 
Sbjct: 901 SNGEKGTRGVSGKQGPRGQRGPTGPRGQRGPRGATGKAGA 940



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 88/194 (45%), Gaps = 45/194 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+G  G  G KGE G  G +G +G  GV+GPPG             +G+PG+ G  
Sbjct: 576 GRPGPLGSPGSPGLKGEGGDPGPQGPRGPQGVMGPPGKSGRRGRAGADGARGMPGEPGT- 634

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-- 218
             KGD G+ G  G+PGDEG RG  G +G PG  G DG  G  G+ G  G+PG  G  G  
Sbjct: 635 --KGDRGFDGLPGLPGDEGHRGDSGPLGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLL 692

Query: 219 -------------IPGKDGLPGKDG---------------IPGTNGTNGEKGMTGPRGNR 250
                        + G DG  G  G                PGT G  G +G  GP G +
Sbjct: 693 GPKGPPGIAGPPGVRGNDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGAIGPHGEK 752

Query: 251 GKSGINGVPGTPAI 264
           G +G  G+PG P  
Sbjct: 753 GPTGKPGLPGMPGA 766



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 69/128 (53%), Gaps = 6/128 (4%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +G  G  G  G PGP G PG  G +G  GD   PGPQG  G +G  GP G  G  GR G 
Sbjct: 566 KGPPGPMGFTGRPGPLGSPGSPGLKGEGGD---PGPQGPRGPQGVMGPPGKSGRRGRAGA 622

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           DG  G+PGEPG  G  G +G+ G+PG +G  G  G  G  G+ GE G    RG+ G  G 
Sbjct: 623 DGARGMPGEPGTKGDRGFDGLPGLPGDEGHRGDSGPLGPPGSQGEDGE---RGDDGDVGP 679

Query: 256 NGVPGTPA 263
            G+PG P 
Sbjct: 680 RGLPGEPG 687



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 93/204 (45%), Gaps = 54/204 (26%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGV------------VGPPGPQGIPG 155
           PPG  G  G+ G  GA+G   E G KG+RG  G PG+            +GPPG QG  G
Sbjct: 610 PPGKSGRRGRAGADGARGMPGEPGTKGDRGFDGLPGLPGDEGHRGDSGPLGPPGSQGEDG 669

Query: 156 ---DEGKRGPKGDMGYPGPQG---------------IPGDEGKRGPKGDM---------- 187
              D+G  GP+G  G PGP+G               + G++G  GPKG++          
Sbjct: 670 ERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGPPGVRGNDGPHGPKGNLGPQGEPGPPG 729

Query: 188 --------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNG 236
                   G PG  G  G  G  G  G  G+PG  G DG    PGK+G PG  G  G NG
Sbjct: 730 QQGTPGTQGMPGPQGAIGPHGEKGPTGKPGLPGMPGADGPPGHPGKEGPPGTKGNQGPNG 789

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GPRG +G  GI G+ G
Sbjct: 790 PQGAIGYPGPRGIKGAQGIRGLKG 813



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 92/204 (45%), Gaps = 45/204 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQG------------- 152
           PGL G  G +G+ G  G  G +GE GE+G  G VGP      PGP+G             
Sbjct: 644 PGLPGDEGHRGDSGPLGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGP 703

Query: 153 --IPGDEGKRGPKGDM------------------GYPGPQGIPGDEGKRGPKGDMGYPGR 192
             + G++G  GPKG++                  G PGPQG  G  G++GP G  G PG 
Sbjct: 704 PGVRGNDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGAIGPHGEKGPTGKPGLPGM 763

Query: 193 IGLDGRDGLPGE---PGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G DG  G PG+   PG  G  G NG  G    PG  G+ G  GI G  G  GEKG  G 
Sbjct: 764 PGADGPPGHPGKEGPPGTKGNQGPNGPQGAIGYPGPRGIKGAQGIRGLKGHKGEKGEDGF 823

Query: 247 RGNRGKSGINGVPGTPAICAYKRE 270
            G +G  G+ G  G   +   + E
Sbjct: 824 PGIKGDFGVKGERGEAGLPGPRGE 847



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 81/177 (45%), Gaps = 39/177 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------------GPQGIPG 155
            P G  G  G  GE+G +G+ G KGERGE G  G  G P               GP G  G
Sbjct: 1345 PVGFPGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSPGPPGENGPPGPLGKRGPAGTRG 1404

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             EG++G KG  G PG  G PG   K GP G  G PG+ G +G  GLPG  G  G PG  G
Sbjct: 1405 PEGRQGEKGTKGDPGAVGPPG---KTGPVGPQGQPGKPGTEGLRGLPGSVGEQGSPGAAG 1461

Query: 216  ---------------MDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRG 251
                           + G PG  G  G  G+      PG  G  G++G+ GP+G+ G
Sbjct: 1462 QKGPPGPVGPAGLPGLRGDPGAKGEKGHQGLIGLVGAPGEQGKKGDRGLPGPQGSTG 1518



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 81/179 (45%), Gaps = 39/179 (21%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---------------GPPGPQG 152
            E   PG  GP G  GE G KG  G +GE+GE G PG                 G PGP G
Sbjct: 1288 EKGEPGESGPPGVVGEPGKKGPRGERGEKGEAGQPGTPGPAGGRGRPGDDGPKGNPGPVG 1347

Query: 153  IPGDE---GKRGPKGDMGYPGPQGIPGDEG------------------KRGPKGDMGYPG 191
             PGD    G+ GP+G  G  G +G  G++G                  KRGP G  G  G
Sbjct: 1348 FPGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSPGPPGENGPPGPLGKRGPAGTRGPEG 1407

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            R    G  G  G+PG  G PG+ G  G  G+ G PG +G+ G  G+ GE+G  G  G +
Sbjct: 1408 R---QGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGSPGAAGQK 1463



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 86/216 (39%), Gaps = 48/216 (22%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA-------------- 141
           L   +G    +    PPG QG  G++G+ G  G  G+ GE G +G               
Sbjct: 646 LPGDEGHRGDSGPLGPPGSQGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPPGIAGPPG 705

Query: 142 ----PGVVGP------------------PGPQGIPGDEGKRGPKGDM---------GYPG 170
                G  GP                  PG QG+PG +G  GP G+          G PG
Sbjct: 706 VRGNDGPHGPKGNLGPQGEPGPPGQQGTPGTQGMPGPQGAIGPHGEKGPTGKPGLPGMPG 765

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPG 227
             G PG  GK GP G  G  G  G  G  G PG  G+    GI G  G  G  G+DG PG
Sbjct: 766 ADGPPGHPGKEGPPGTKGNQGPNGPQGAIGYPGPRGIKGAQGIRGLKGHKGEKGEDGFPG 825

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G  GE G+ GPRG  G  G  G  G P 
Sbjct: 826 IKGDFGVKGERGEAGLPGPRGEDGPEGPKGRVGPPG 861



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 70/127 (55%), Gaps = 3/127 (2%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            +GP G +G  G +GE G KG+ G  G PG  GP GPQG PG  G  G +G  G  G QG 
Sbjct: 1397 RGPAGTRGPEGRQGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGS 1456

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
            PG  G++GP G +G  G  GL G  G  GE G  G+    G+ G PG+ G  G  G+PG 
Sbjct: 1457 PGAAGQKGPPGPVGPAGLPGLRGDPGAKGEKGHQGL---IGLVGAPGEQGKKGDRGLPGP 1513

Query: 235  NGTNGEK 241
             G+ G K
Sbjct: 1514 QGSTGAK 1520



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 80/208 (38%), Gaps = 67/208 (32%)

Query: 132 VKGERGEKGAPGVVGPPGPQGI--------------------------PGDEGKRGPKGD 165
           V+ ++GEKG P ++ P    G+                           GD G+RGP G 
Sbjct: 458 VRSQKGEKGEPAILEP----GMLIDGPPGPEGPAGPTGPPGPSGPPGSVGDPGERGPPGR 513

Query: 166 MGYPGPQGIPGDEGK-------------------------------------RGPKGDMG 188
            G PG  G+PG  G                                      +GP G MG
Sbjct: 514 AGLPGADGVPGPPGTSVMLPFRFGQSGGDKGPVVSAQEAQAAAILSQARMALKGPPGPMG 573

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           + GR G  G  G PG  G  G PG  G  G  G  G PGK G  G  G +G +GM G  G
Sbjct: 574 FTGRPGPLGSPGSPGLKGEGGDPGPQGPRGPQGVMGPPGKSGRRGRAGADGARGMPGEPG 633

Query: 249 NRGKSGINGVPGTPAICAYKRESCSLLP 276
            +G  G +G+PG P    ++ +S  L P
Sbjct: 634 TKGDRGFDGLPGLPGDEGHRGDSGPLGP 661



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 67/171 (39%), Gaps = 42/171 (24%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------------------MGYPGPQGI 174
            KGE GE G PGVVG PG +G  G+ G++G  G                    G PGP G 
Sbjct: 1289 KGEPGESGPPGVVGEPGKKGPRGERGEKGEAGQPGTPGPAGGRGRPGDDGPKGNPGPVGF 1348

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------------------------GLDGI 210
            PGD G  G  G  G  G  G  G DG  GE                         G +G 
Sbjct: 1349 PGDPGPTGEVGPRGQDGAKGERGEDGEQGEAGSPGPPGENGPPGPLGKRGPAGTRGPEGR 1408

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G PG  G PGK G  G  G  G+ G  G RG  G  G  G PG 
Sbjct: 1409 QGEKGTKGDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGSPGA 1459



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 81/222 (36%), Gaps = 78/222 (35%)

Query: 118  IGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------ 162
             G  GE+G +G+    G KG+ G +G PG  GP G QG+PG  G++G             
Sbjct: 1199 AGADGELGPRGQQGPFGAKGDEGSRGFPGAPGPIGLQGLPGPSGEKGETGDVGPLGPPGP 1258

Query: 163  ------------------------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                                          KG+ G  GP G+ G+ GK+GP+G+ G  G 
Sbjct: 1259 PGPRGPAGPNGADGPQGPPGGLGNPGPIGEKGEPGESGPPGVVGEPGKKGPRGERGEKGE 1318

Query: 193  IGLDG---------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG- 236
             G  G                 G PG  G  G PG  G  G  G+DG  G+ G  G  G 
Sbjct: 1319 AGQPGTPGPAGGRGRPGDDGPKGNPGPVGFPGDPGPTGEVGPRGQDGAKGERGEDGEQGE 1378

Query: 237  -----------------TNGEKGMTGPRGNRGKSGINGVPGT 261
                               G  G  GP G +G+ G  G PG 
Sbjct: 1379 AGSPGPPGENGPPGPLGKRGPAGTRGPEGRQGEKGTKGDPGA 1420



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 58/133 (43%), Gaps = 51/133 (38%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGV------------VGPPGP------- 150
           GL+G  G+KGE    G KG+ GVKGERGE G PG             VGPPG        
Sbjct: 810 GLKGHKGEKGEDGFPGIKGDFGVKGERGEAGLPGPRGEDGPEGPKGRVGPPGEIGPIGTV 869

Query: 151 --------QGIPGDEGKRGPKGDMGYPG---------------------PQGIPGDEGKR 181
                    G+PG  G++GPKG +G+PG                      +G  G  G+R
Sbjct: 870 GEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGSNGEKGTRGVSGKQGPRGQRGPTGPRGQR 929

Query: 182 GPKGDMGYPGRIG 194
           GP+G  G  G  G
Sbjct: 930 GPRGATGKAGAKG 942


>gi|395844322|ref|XP_003794911.1| PREDICTED: collagen alpha-1(V) chain [Otolemur garnettii]
          Length = 1844

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 79/148 (53%), Gaps = 15/148 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G     GI GD G+ GP G  G  GP+G    +
Sbjct: 799 GVKGADGIRGLKGTKGEKGEDGFPGFKGD---MGIKGDRGEIGPPGPRGEDGPEGP---K 852

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIP 232
           G+ GP GD   PG +G  G  G  G PGL G PGR       G  G PG +G  G  G P
Sbjct: 853 GRSGPNGD---PGPLGPSGEKGKLGVPGLPGYPGRQGPKGSVGFPGFPGANGEKGGRGTP 909

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G++G TGPRG RG  GI G PG
Sbjct: 910 GKPGPRGQRGPTGPRGERGPRGITGKPG 937



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 68/136 (50%), Gaps = 33/136 (24%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------- 152
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G                 
Sbjct: 808 GLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRSGPNGDPGPLGPS 867

Query: 153 ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                     +PG  G++GPKG +G+P   G PG  G++G +G  G PG  G  G  G  
Sbjct: 868 GEKGKLGVPGLPGYPGRQGPKGSVGFP---GFPGANGEKGGRGTPGKPGPRGQRGPTGPR 924

Query: 203 GEPGLDGIPGRNGMDG 218
           GE G  GI G+ G  G
Sbjct: 925 GERGPRGITGKPGPKG 940



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 61/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1410 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 1466

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1467 PGPLGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGPKGEQGI 1526



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG +G  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 882 PGRQGP---KGSVGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 938

Query: 172 QG 173
           +G
Sbjct: 939 KG 940



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR-------------- 160
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG  G++              
Sbjct: 1410 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1469

Query: 161  -------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                         GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1470 LGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGPKG 1522



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 88/220 (40%), Gaps = 87/220 (39%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPGVVGPP 148
           G+ G  G KG+ G  G  G+ GE+G++                        G  G+ G P
Sbjct: 625 GMPGQTGPKGDRGFDGLAGLPGEKGQRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEP 684

Query: 149 GPQG---------------IPGDEGKRGPKGDMGY------------PGPQGIPGDEGKR 181
           GP+G               + G +G+ GPKG++G             PG QG+PG +G  
Sbjct: 685 GPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAI 744

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------------------ 223
           GP G+ G  G+            PGL G+PG +G  G PGK+                  
Sbjct: 745 GPPGEKGPLGK------------PGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPI 792

Query: 224 ------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                 G+ G DGI G  GT GEKG  G  G +G  GI G
Sbjct: 793 GYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKG 832



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G+KG++G  G  G  G +G KG+   PG  G  G +G  G  GK GP+G  G 
Sbjct: 861 PGPLGPSGEKGKLGVPGLPGYPGRQGPKGSVGFPGFPGANGEKGGRGTPGKPGPRGQRGP 920

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIG 194
            GP+      G+RGP+G  G PG  G
Sbjct: 921 TGPR------GERGPRGITGKPGPKG 940



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 92/277 (33%), Gaps = 132/277 (47%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKR-------------------- 160
           +G  G  G R   G PG  GP G +      G+PG++G+R                    
Sbjct: 615 RGRAGSDGAR---GMPGQTGPKGDRGFDGLAGLPGEKGQRGDPGPSGPPGPPGDDGERGD 671

Query: 161 ----GPKGDMGYPGP--------------------------------------------- 171
               GP+G  G PGP                                             
Sbjct: 672 DGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGN 731

Query: 172 ---QGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEP-------------------- 205
              QG+PG +G  GP   KG +G PG  G+ G DG PG P                    
Sbjct: 732 PGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGP 791

Query: 206 ----------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------ 249
                     G DGI G  G  G  G+DG PG  G  G  G  GE G  GPRG       
Sbjct: 792 IGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGP 851

Query: 250 RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           +G+SG NG PG             L P+ E  +L +P
Sbjct: 852 KGRSGPNGDPGP------------LGPSGEKGKLGVP 876



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 70/185 (37%), Gaps = 78/185 (42%)

Query: 139 KGAPGVVGPPGPQGI---------------PGDEGKRG------PKGDMGYPGPQGIPGD 177
           KG PG +GP GP+G+                G +G RG      PKGD G+ G  G+PG+
Sbjct: 588 KGEPGDMGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGE 647

Query: 178 EGKR------------------------GPKGDMGYPGR------------------IGL 195
           +G+R                        GP+G  G PG                    G+
Sbjct: 648 KGQRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGM 707

Query: 196 DGRDGLPG---------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           DG+ G  G                PG  G+PG  G  G PG+ G  GK G+PG  G +G 
Sbjct: 708 DGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGP 767

Query: 241 KGMTG 245
            G  G
Sbjct: 768 PGHPG 772


>gi|426221200|ref|XP_004004798.1| PREDICTED: macrophage receptor MARCO [Ovis aries]
          Length = 407

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 88/169 (52%), Gaps = 24/169 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G++G +G KG++G KG++G+KG+ G KG  GV+GPPG +G  GD GK       G PG  
Sbjct: 126 GMKGDVGMKGDVGMKGDVGMKGDVGMKGDMGVMGPPGARGDKGDSGKP------GSPGLA 179

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------LDGIPGRN 214
           GIPG +G +GP G  G PG  G  G  G  GE G                  ++G+ G  
Sbjct: 180 GIPGIKGDQGPPGVKGLPGFPGAAGSPGAKGETGSTGPTGPIGPPGMPGRPGVEGVKGSK 239

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G+ G+ G  G+ G PG  G  GEKG  G  G +G  G +G  G P 
Sbjct: 240 GDTGLQGQKGTKGESGFPGLAGVKGEKGSPGLGGLKGAPGPSGQKGEPG 288



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 85/173 (49%), Gaps = 27/173 (15%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           ++G  G+KG++G KG MG+KG+ G KG  G+ G  G +G  G +G  G KGDMG  GP G
Sbjct: 103 IKGEAGRKGDMGMKGNMGMKGDMGMKGDVGMKGDVGMKGDVGMKGDVGMKGDMGVMGPPG 162

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                  RG KGD G PG  GL    G+PG  G  G PG  G+ G PG  G PG  G  G
Sbjct: 163 A------RGDKGDSGKPGSPGL---AGIPGIKGDQGPPGVKGLPGFPGAAGSPGAKGETG 213

Query: 234 T------------------NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           +                   G  G KG TG +G +G  G +G PG   +   K
Sbjct: 214 STGPTGPIGPPGMPGRPGVEGVKGSKGDTGLQGQKGTKGESGFPGLAGVKGEK 266



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 89/222 (40%), Gaps = 93/222 (41%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVG---------PPGPQGIP 154
           G++G +G KG++G KG+MGV         KG+ G+ G+PG+ G         PPG +G+P
Sbjct: 138 GMKGDVGMKGDVGMKGDMGVMGPPGARGDKGDSGKPGSPGLAGIPGIKGDQGPPGVKGLP 197

Query: 155 G---------------------------------------------DEGKRGPKGDMGYP 169
           G                                              +G++G KG+ G+P
Sbjct: 198 GFPGAAGSPGAKGETGSTGPTGPIGPPGMPGRPGVEGVKGSKGDTGLQGQKGTKGESGFP 257

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G+ G++G                      PG  GL G PG +G  G PG  G  G  
Sbjct: 258 GLAGVKGEKGS---------------------PGLGGLKGAPGPSGQKGEPGSRGATGPQ 296

Query: 230 GIPGTNGTNGEKGMT----GPRGNRGKSGI--NGVPGTPAIC 265
           G  G  G  G+  +T    G R NRG++ +  NG  GT  IC
Sbjct: 297 GSKGEKGQKGDSSLTVRIIGSR-NRGRAEVFYNGAWGT--IC 335



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 35/65 (53%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
             +QG   +  E   PGL G  G+KG  G  G  G  G  G+KG PG  G  GPQG  G+
Sbjct: 242 TGLQGQKGTKGESGFPGLAGVKGEKGSPGLGGLKGAPGPSGQKGEPGSRGATGPQGSKGE 301

Query: 157 EGKRG 161
           +G++G
Sbjct: 302 KGQKG 306


>gi|294489336|ref|NP_001170943.1| collagen type IV alpha1 precursor [Oryzias latipes]
 gi|283549302|dbj|BAI66290.1| collagen type IV alpha1 [Oryzias latipes]
          Length = 1639

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 99/191 (51%), Gaps = 31/191 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEM-------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           PPGL G  G++G+ G KG+        G+ GE G +G  G  GPPGP G  GD+G+ GP 
Sbjct: 417 PPGLPGLQGEEGQKGDKGDTCVHCETSGIIGEPGPQGPKGDQGPPGPVGSKGDKGQTGPP 476

Query: 164 GDMGYPGPQGIPG---DEGKRGPKGDM----GYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           G+ G PG QG PG     G  G  GD+    G  G  G  GR GL G+PGLDG+PGR+G+
Sbjct: 477 GENGRPGSQGNPGLMGAPGAVGAPGDVVIAPGLKGEKGFPGRPGLQGQPGLDGLPGRDGL 536

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEK-----------------GMTGPRGNRGKSGINGVP 259
            G PG  G P K+GI G  G +GE                  G  G RG++G  G  G P
Sbjct: 537 PGQPGLKGEPAKEGIKGERGRDGEPGQIGPPGERGPPGIAGFGQPGERGDKGGQGRPGTP 596

Query: 260 GTPAICAYKRE 270
           G P +   K E
Sbjct: 597 GAPGLPGLKGE 607



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 84/218 (38%), Positives = 104/218 (47%), Gaps = 36/218 (16%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
             S  E   PG  GP G KG+ G  G  G KG  GEKG  G  G PG  G+PG  G++G  
Sbjct: 981  GSLGEMGIPGPAGPKGTKGDFGRPGHPGFKGLDGEKGDTGSPGEPG-IGVPGVPGQKGHT 1039

Query: 164  GDMGYPGP---------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            GD G PG           G+PG  G +GPKGD G  G  G  GR G  G+PGL G  G  
Sbjct: 1040 GDPGVPGSPGEKGEKGYSGMPGSPGVQGPKGDKGSIGYQGQAGRPGDKGDPGLPGSVGEP 1099

Query: 215  GMDGIPGKDGL------------PGKDGIPGTNGTNGEKGMT-----------GPRGNRG 251
            G DG PG+ GL            PG+DGIPG+ G  G+ G+            G +G++G
Sbjct: 1100 GRDGRPGEGGLQGPSGPRGDKGEPGEDGIPGSTGERGDPGLPGRGVPGPPGELGTKGDKG 1159

Query: 252  KSGINGVPGTPAICAYKRES---CSLLPNSETSQLLIP 286
             SG+ G PG P +   K +        P  ET +  +P
Sbjct: 1160 SSGLPGAPGNPGVPGIKGDKGYPGPQGPQGETGERGLP 1197



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 101/224 (45%), Gaps = 49/224 (21%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---- 151
            +  +QGF  S      PGL+G  G  G  G  GE G KGERGE   PG+ GPPG      
Sbjct: 856  MPGVQGFPGSPGLPGSPGLRGDPGFTGPSGESGEPGPKGERGE---PGLQGPPGEMNDVD 912

Query: 152  -----------------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI- 193
                             G+ GD G +G +GD G PG  G PG  G+ G KGD G+PG   
Sbjct: 913  MEHMKGEKGDTGDRGNPGVSGDRGYQGVQGDPGMPGKDGEPGSPGQPGDKGDRGFPGEPG 972

Query: 194  -----------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
                                   G  G  G PG PG  G+ G  G  G PG+ G+ G  G
Sbjct: 973  SMGPPGQKGSLGEMGIPGPAGPKGTKGDFGRPGHPGFKGLDGEKGDTGSPGEPGI-GVPG 1031

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            +PG  G  G+ G+ G  G +G+ G +G+PG+P +   K +  S+
Sbjct: 1032 VPGQKGHTGDPGVPGSPGEKGEKGYSGMPGSPGVQGPKGDKGSI 1075



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 89/186 (47%), Gaps = 40/186 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE-----------------------KGAPGVVGPPG 149
            GLQGP G +G+ G  GE G+ G  GE                       KG+ G+ G PG
Sbjct: 1109 GLQGPSGPRGDKGEPGEDGIPGSTGERGDPGLPGRGVPGPPGELGTKGDKGSSGLPGAPG 1168

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG--------PKGDMGYPGRIGLDGRDGL 201
              G+PG       KGD GYPGPQG  G+ G+RG        PKGD G  G  G  G  G+
Sbjct: 1169 NPGVPGI------KGDKGYPGPQGPQGETGERGLPGISLQGPKGDRGETGNQGAPGPKGV 1222

Query: 202  PGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             GE   PG DG  G  G  G+PG  G  G  G PG  G  G+ G+ G  G +G+ G+ GV
Sbjct: 1223 IGEAGFPGRDGEKGEKGSQGLPGFQGETGHKGDPGVPGLPGQTGLPGIDGQKGERGLQGV 1282

Query: 259  PGTPAI 264
            PG P  
Sbjct: 1283 PGFPGT 1288



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 89/170 (52%), Gaps = 27/170 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGD 165
            PG+QGP G KG IG +G+ G  G++G+ G PG VG PG  G PG+       G R   GD
Sbjct: 1063 PGVQGPKGDKGSIGYQGQAGRPGDKGDPGLPGSVGEPGRDGRPGEGGLQGPSGPR---GD 1119

Query: 166  MGYPGPQGIPGDEGKRG-----------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
             G PG  GIPG  G+RG           P G++G  G  G  G  G PG PG+ GI G  
Sbjct: 1120 KGEPGEDGIPGSTGERGDPGLPGRGVPGPPGELGTKGDKGSSGLPGAPGNPGVPGIKGDK 1179

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G  G  G+ G+PG +       + GP+G+RG++G  G PG   +
Sbjct: 1180 GYPGPQGPQGETGERGLPGIS-------LQGPKGDRGETGNQGAPGPKGV 1222



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 79/167 (47%), Gaps = 43/167 (25%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-------PQGIPGDEGKRGPKGDMGYPG 170
            GQ GE G KG  G  G  G  G PG+ G PG       PQG+PG  G+           
Sbjct: 578 FGQPGERGDKGGQGRPGTPGAPGLPGLKGEPGKGVSIPGPQGVPGPRGEN---------- 627

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRD-----------------GLPGEPGLDGIPGR 213
             G+PG +G+RG +GD G PG  G  G                   G PG PGL G PGR
Sbjct: 628 --GLPGIQGERGLQGDPGLPGFPGDKGEQGPPGIGFPGPSGPKGYSGAPGAPGLPGEPGR 685

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G DG+ G+ G PG+ G PG       +G+ GP+G +G  GI G PG
Sbjct: 686 PGKDGLTGQAGSPGQKGEPG-------RGLPGPKGFQGPPGITGFPG 725



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 79/146 (54%), Gaps = 13/146 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G KG+ G  G  G +GE GE+G PG+        + G +G RG  G+ G PGP
Sbjct: 1167 PGNPGVPGIKGDKGYPGPQGPQGETGERGLPGIS-------LQGPKGDRGETGNQGAPGP 1219

Query: 172  QGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            +G+      PG +G++G KG  G PG  G  G  G PG PGL G  G  G+DG  G+ GL
Sbjct: 1220 KGVIGEAGFPGRDGEKGEKGSQGLPGFQGETGHKGDPGVPGLPGQTGLPGIDGQKGERGL 1279

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G  G PGT G  G+ G  G  G+RG
Sbjct: 1280 QGVPGFPGTKGEIGDIGFKGEVGDRG 1305



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 80/151 (52%), Gaps = 9/151 (5%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQ G  G KGEMG  G  G +G PG  G PG  G+ GD G  GP G+ G PGP+G  G+ 
Sbjct: 840 GQIGTQGRKGEMGNMGMPGVQGFPGSPGLPGSPGLRGDPGFTGPSGESGEPGPKGERGEP 899

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G +GP G+M       + G  G  G+ G  G+ G  G  G+ G  G+PGKDG PG+ G  
Sbjct: 900 GLQGPPGEMNDVDMEHMKGEKGDTGDRGNPGVSGDRGYQGVQGDPGMPGKDGEPGSPGQP 959

Query: 239 GEK---------GMTGPRGNRGKSGINGVPG 260
           G+K         G  GP G +G  G  G+PG
Sbjct: 960 GDKGDRGFPGEPGSMGPPGQKGSLGEMGIPG 990



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 90/198 (45%), Gaps = 51/198 (25%)

Query: 112  PGLQGPIGQKGEIGA-----KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            PG QGP G+ GE G      +G  G +GE G +GAPG  G  G  G PG +G++G KG  
Sbjct: 1182 PGPQGPQGETGERGLPGISLQGPKGDRGETGNQGAPGPKGVIGEAGFPGRDGEKGEKGSQ 1241

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD--------- 217
            G PG Q   G+ G +G  G  G PG+ GL G DG  GE GL G+PG  G           
Sbjct: 1242 GLPGFQ---GETGHKGDPGVPGLPGQTGLPGIDGQKGERGLQGVPGFPGTKGEIGDIGFK 1298

Query: 218  -------------------------------GIPGKDGLPGKDGIPGTNGTNGEKGMT-- 244
                                           G PG  GLPG  G  G  G  G++G+T  
Sbjct: 1299 GEVGDRGFPGLKGGEGPPGPPGPQLFIKGDVGAPGIQGLPGPQGPAGFPGLKGQQGITGF 1358

Query: 245  -GPRGNRGKSGINGVPGT 261
             GP+G+ G  G +G+PG 
Sbjct: 1359 PGPKGDNGVPGYDGLPGA 1376



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 89/202 (44%), Gaps = 58/202 (28%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD-------------- 156
           P G QGP G  G  G KG +G+ G  G++G     GPPGPQG+ GD              
Sbjct: 711 PKGFQGPPGITGFPGQKGNIGLPGIPGQEGQ---TGPPGPQGLKGDIGPPGLPGQTGPPG 767

Query: 157 ---------------------EGKRGPKGDMGYPGPQGI--PGDEGKRGPKG-------- 185
                                 G+ G KGD G+PG  G+  PG +G++G  G        
Sbjct: 768 APGKGLPGPPGPQGPHGEPGPHGREGIKGDKGFPGTPGLDMPGPQGEKGVPGFPGIPGGR 827

Query: 186 -------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                    G  G+IG  GR    GE G  G+PG  G  G PG  G PG  G PG  G +
Sbjct: 828 GLPGPPGSAGRDGQIGTQGRK---GEMGNMGMPGVQGFPGSPGLPGSPGLRGDPGFTGPS 884

Query: 239 GEKGMTGPRGNRGKSGINGVPG 260
           GE G  GP+G RG+ G+ G PG
Sbjct: 885 GESGEPGPKGERGEPGLQGPPG 906



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 76/149 (51%), Gaps = 34/149 (22%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIP 175
            G+KGE G++G  G +GE G KG PGV G PG  G+PG    +G+RG +G  G+PG +G  
Sbjct: 1233 GEKGEKGSQGLPGFQGETGHKGDPGVPGLPGQTGLPGIDGQKGERGLQGVPGFPGTKGEI 1292

Query: 176  GDEGKRGP-------------------------KGDMGYPGRIGLDGRDGLPGEPGLDG- 209
            GD G +G                          KGD+G PG  GL G  G  G PGL G 
Sbjct: 1293 GDIGFKGEVGDRGFPGLKGGEGPPGPPGPQLFIKGDVGAPGIQGLPGPQGPAGFPGLKGQ 1352

Query: 210  -----IPGRNGMDGIPGKDGLPGKDGIPG 233
                  PG  G +G+PG DGLPG  G PG
Sbjct: 1353 QGITGFPGPKGDNGVPGYDGLPGAKGEPG 1381



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 96/229 (41%), Gaps = 80/229 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G+ G+ G  G+ G  G++GE G  G+ GP G QG PG  G  G KG++G PG 
Sbjct: 677 PGLPGEPGRPGKDGLTGQAGSPGQKGEPGR-GLPGPKGFQGPPGITGFPGQKGNIGLPG- 734

Query: 172 QGIPGDEGKRGP------KGDMGYPG--------------------------------RI 193
             IPG EG+ GP      KGD+G PG                                R 
Sbjct: 735 --IPGQEGQTGPPGPQGLKGDIGPPGLPGQTGPPGAPGKGLPGPPGPQGPHGEPGPHGRE 792

Query: 194 GLDGRDGLPGEPGLD--------GIPG------------------RNGM----------- 216
           G+ G  G PG PGLD        G+PG                  R+G            
Sbjct: 793 GIKGDKGFPGTPGLDMPGPQGEKGVPGFPGIPGGRGLPGPPGSAGRDGQIGTQGRKGEMG 852

Query: 217 -DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G+PG  G PG  G+PG+ G  G+ G TGP G  G+ G  G  G P +
Sbjct: 853 NMGMPGVQGFPGSPGLPGSPGLRGDPGFTGPSGESGEPGPKGERGEPGL 901



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 78/163 (47%), Gaps = 18/163 (11%)

Query: 84  PWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE-------- 135
           P +       + +   QG      E   PG+QG  G +G+ G  G  G KGE        
Sbjct: 602 PGLKGEPGKGVSIPGPQGVPGPRGENGLPGIQGERGLQGDPGLPGFPGDKGEQGPPGIGF 661

Query: 136 ------RGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
                 +G  GAPG  G PG  G PG +G   + G  G  G PG +G+PG +G +GP G 
Sbjct: 662 PGPSGPKGYSGAPGAPGLPGEPGRPGKDGLTGQAGSPGQKGEPG-RGLPGPKGFQGPPGI 720

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G+PG+ G  G  G+PG+ G  G PG  G+ G  G  GLPG+ 
Sbjct: 721 TGFPGQKGNIGLPGIPGQEGQTGPPGPQGLKGDIGPPGLPGQT 763



 Score = 39.3 bits (90), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 53/111 (47%), Gaps = 31/111 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE-------------------RGEKGAPGVVGPPGPQG 152
            PG  G  G+ G+IG KGE+G +G                    +G+ GAPG+ G PGPQG
Sbjct: 1283 PGFPGTKGEIGDIGFKGEVGDRGFPGLKGGEGPPGPPGPQLFIKGDVGAPGIQGLPGPQG 1342

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
              G  G +G +G  G+P            GPKGD G PG  GL G  G PG
Sbjct: 1343 PAGFPGLKGQQGITGFP------------GPKGDNGVPGYDGLPGAKGEPG 1381


>gi|354474543|ref|XP_003499490.1| PREDICTED: macrophage receptor MARCO-like [Cricetulus griseus]
          Length = 483

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 92/192 (47%), Gaps = 27/192 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+   G   +T    P G +G  G KG IG KGE+G KG++G+ G PG  G  G +G+ G
Sbjct: 174 LMGAPGKQGATGAPGPQGEKGSKGDKGLIGPKGEIGTKGDKGDIGLPGSKGDMGMKGVTG 233

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------ 203
             G  G +GD G PG  G+PG  G  G KGD G PG  G+ G  G  G            
Sbjct: 234 VMGPPGAQGDKGNPGKPGLPGLAGSPGVKGDQGQPGVQGVPGTPGAAGPSGAKGEPGHPG 293

Query: 204 ------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRG 248
                        PG  G+ G  G  GI G+ G  G+ G+PG  G  G+    G+ GP+G
Sbjct: 294 PPGPTGPPGISGNPGAAGVKGSKGDTGIQGQKGTKGESGVPGLAGRKGDTGNPGLAGPKG 353

Query: 249 NRGKSGINGVPG 260
             G+ G+ G PG
Sbjct: 354 EPGRPGLKGDPG 365



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 91/185 (49%), Gaps = 39/185 (21%)

Query: 112 PGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+ GP GQ   KGE G +G MG  G++G  GAPG   P G +G  GD+G  GPKG++G 
Sbjct: 154 PGVPGPRGQPGIKGEAGLQGLMGAPGKQGATGAPG---PQGEKGSKGDKGLIGPKGEIGT 210

Query: 169 PGPQG---IPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            G +G   +PG   D G +G  G MG PG  G  G  G PG PGL G PG  G  G PG 
Sbjct: 211 KGDKGDIGLPGSKGDMGMKGVTGVMGPPGAQGDKGNPGKPGLPGLAGSPGVKGDQGQPGV 270

Query: 223 DGLPGKDGI---------------------------PGTNGTNGEKGMTGPRGNRGKSGI 255
            G+PG  G                            PG  G  G KG TG +G +G  G 
Sbjct: 271 QGVPGTPGAAGPSGAKGEPGHPGPPGPTGPPGISGNPGAAGVKGSKGDTGIQGQKGTKGE 330

Query: 256 NGVPG 260
           +GVPG
Sbjct: 331 SGVPG 335



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 79/165 (47%), Gaps = 18/165 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G    T    PPG QG  G  G+ G  G  G  G +G++G PGV      QG+PG  G  
Sbjct: 227 GMKGVTGVMGPPGAQGDKGNPGKPGLPGLAGSPGVKGDQGQPGV------QGVPGTPGAA 280

Query: 161 GPKGDMGYPGPQGI------------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GP G  G PG  G             PG  G +G KGD G  G+ G  G  G+PG  G  
Sbjct: 281 GPSGAKGEPGHPGPPGPTGPPGISGNPGAAGVKGSKGDTGIQGQKGTKGESGVPGLAGRK 340

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G  G+ G  G+ G PG  G PG  G++G+ G  G +G +G+S
Sbjct: 341 GDTGNPGLAGPKGEPGRPGLKGDPGMKGSSGQPGQKGEKGQKGQS 385



 Score = 40.0 bits (92), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 36/75 (48%), Gaps = 6/75 (8%)

Query: 195 LDGRDGLPGEPGLDGIP------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           + G  G PG PG  G P      G  G+ G PGK G  G  G  G  G+ G+KG+ GP+G
Sbjct: 147 IKGEPGSPGVPGPRGQPGIKGEAGLQGLMGAPGKQGATGAPGPQGEKGSKGDKGLIGPKG 206

Query: 249 NRGKSGINGVPGTPA 263
             G  G  G  G P 
Sbjct: 207 EIGTKGDKGDIGLPG 221


>gi|348528767|ref|XP_003451887.1| PREDICTED: collagen alpha-1(II) chain-like isoform 1 [Oreochromis
           niloticus]
          Length = 1491

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 84/143 (58%), Gaps = 12/143 (8%)

Query: 116 GPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GP+G KG  G  G  G KGE   +GE G PG+ GP GPQG   +EGKRGP+G+ G  GP+
Sbjct: 451 GPLGPKGTSGDPGIPGFKGEAGPKGEIGPPGLQGPNGPQG---EEGKRGPRGEPGSAGPR 507

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG+   RG  G+ G+PG+ GL G  G PGE G  G  G  G  G PG+   PG+ G+P
Sbjct: 508 GPPGE---RGAPGNRGFPGQDGLAGPKGAPGERGPSGASGPKGASGDPGR---PGEPGLP 561

Query: 233 GTNGTNGEKGMTGPRGNRGKSGI 255
           G  G  G  G  GP+G  G SG 
Sbjct: 562 GARGLTGRPGDAGPQGKVGPSGA 584



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 92/193 (47%), Gaps = 36/193 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG  G  G+ G  GA+G  G +G RGE G PG  GP G  G PG +G  G KG  G PG 
Sbjct: 372 PGSPGAKGEAGPTGARGPEGAQGPRGESGTPGSPGPSGASGNPGTDGIPGAKGSAGAPGI 431

Query: 171 -----------------------PQG------IPGDEGKRGPKGDMGYP------GRIGL 195
                                  P+G      IPG +G+ GPKG++G P      G  G 
Sbjct: 432 AGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIPGFKGEAGPKGEIGPPGLQGPNGPQGE 491

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +G+ G  GEPG  G  G  G  G PG  G PG+DG+ G  G  GE+G +G  G +G SG 
Sbjct: 492 EGKRGPRGEPGSAGPRGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGASGPKGASGD 551

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 552 PGRPGEPGLPGAR 564



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 88/177 (49%), Gaps = 15/177 (8%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  PPGLQGP G +GE G +G  G  G  G +G PG  G PG +G PG
Sbjct: 464 IPGFKGEAGPKGEIGPPGLQGPNGPQGEEGKRGPRGEPGSAGPRGPPGERGAPGNRGFPG 523

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            +G  GPKG  G  GP G     G +G  GD G PG  GL G  GL G PG  G  G+ G
Sbjct: 524 QDGLAGPKGAPGERGPSGA---SGPKGASGDPGRPGEPGLPGARGLTGRPGDAGPQGKVG 580

Query: 216 MDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+D            G PG  G PG  G  GE G +G +G  G  G+ G+PG
Sbjct: 581 PSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGLAGAPGLRGLPG 637



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 86/189 (45%), Gaps = 39/189 (20%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPG---------------VVGPPG 149
           E  P G  GP G++G   E GA G  G++G RG  G PG                 GPPG
Sbjct: 692 EAGPAGATGPRGERGFPGERGAAGSQGLQGPRGLPGTPGTDGPKGAIGPAGTAGAQGPPG 751

Query: 150 PQGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG+ G
Sbjct: 752 LQGMPGERGGAGIPGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPSGPNGEKGESG 811

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G  G  G  G PG+ G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G
Sbjct: 812 PAGPSGAPGVRGAPGDRGETGPPGPAGFAGPPGADGQPGTKGEQGEPGQKGDAGAPGPQG 871

Query: 249 NRGKSGING 257
             G  G  G
Sbjct: 872 PSGAPGPAG 880



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 83/173 (47%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------- 153
           G   +     PPGLQG  G++G  G  G  G +G+ GEKG  G  G  G +G+       
Sbjct: 739 GPAGTAGAQGPPGLQGMPGERGGAGIPGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPP 798

Query: 154 -----PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                 G++G+ GP G  G PG +G PGD G+ GP G  G+ G  G DG+ G  GE    
Sbjct: 799 GPSGPNGEKGESGPAGPSGAPGVRGAPGDRGETGPPGPAGFAGPPGADGQPGTKGE---Q 855

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G PG+ G  G PG     G  G PG  G  G  G  G RG +G  G  G PG 
Sbjct: 856 GEPGQKGDAGAPGPQ---GPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGA 905



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 85/184 (46%), Gaps = 39/184 (21%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------KGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+ G             +G+ 
Sbjct: 601 GQPGVMGFPGPKGATGEPGKSGEKGLAGAPGLRGLPGKDGETGSAGPPGPAGPAGERGEQ 660

Query: 167 GYPGP---------------------QGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLP 202
           G PGP                     QG+PG+    G  GP+G+ G+PG  G  G  GL 
Sbjct: 661 GQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGPAGATGPRGERGFPGERGAAGSQGLQ 720

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVP 259
           G  GL G PG +G  G  G  G  G  G PG  G  GE+   G+ GP+G+RG  G  G  
Sbjct: 721 GPRGLPGTPGTDGPKGAIGPAGTAGAQGPPGLQGMPGERGGAGIPGPKGDRGDVGEKGPE 780

Query: 260 GTPA 263
           G P 
Sbjct: 781 GAPG 784



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 91/232 (39%), Gaps = 81/232 (34%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGD---EGKRGPKGD- 165
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+   PGD   +GK GP G  
Sbjct: 526 GLAGPKGAPGERGPSGASGPKGASGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 585

Query: 166 --------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------ 199
                               MG+PGP+G  G+ GK G KG  G PG  GL G+D      
Sbjct: 586 GEDGRPGPPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGLAGAPGLRGLPGKDGETGSA 645

Query: 200 ------------------------------------------GLPGEPGLDGIPGRNGMD 217
                                                     G+PGE G  G  G  G  
Sbjct: 646 GPPGPAGPAGERGEQGQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGPAGATGPRGER 705

Query: 218 GIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G PG+       GL G  G+PGT GT+G KG  GP G  G  G  G+ G P 
Sbjct: 706 GFPGERGAAGSQGLQGPRGLPGTPGTDGPKGAIGPAGTAGAQGPPGLQGMPG 757



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 70/145 (48%), Gaps = 30/145 (20%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GE G  G  GP G +G PG+   RG  G  G  GP+G+PG  G  GPKG +G  G  G  
Sbjct: 691 GEAGPAGATGPRGERGFPGE---RGAAGSQGLQGPRGLPGTPGTDGPKGAIGPAGTAGAQ 747

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGK------------DGLPGKDGIPG---------TN 235
           G       PGL G+PG  G  GIPG             +G PGKDG  G          +
Sbjct: 748 G------PPGLQGMPGERGGAGIPGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPS 801

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G NGEKG +GP G  G  G+ G PG
Sbjct: 802 GPNGEKGESGPAGPSGAPGVRGAPG 826



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 73/169 (43%), Gaps = 15/169 (8%)

Query: 83  NPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG-------- 134
            P     A     L  M G         P G +G +G+KG  GA G+ G +G        
Sbjct: 739 GPAGTAGAQGPPGLQGMPGERGGAGIPGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPP 798

Query: 135 -------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
                  E+GE G  G  G PG +G PGD G+ GP G  G+ GP G  G  G +G +G+ 
Sbjct: 799 GPSGPNGEKGESGPAGPSGAPGVRGAPGDRGETGPPGPAGFAGPPGADGQPGTKGEQGEP 858

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G  G  G  G  G PG  G  G +G  G  G  G PG  G PG  G
Sbjct: 859 GQKGDAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAG 907



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 84/227 (37%), Gaps = 81/227 (35%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+R           
Sbjct: 288 PGIKGHRGYPGRDGAKGETGAVGAKGESGSPGESGAPGPMGPRGLPGERGRPGASGAAGA 347

Query: 161 -------------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                    G  G  G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 348 RGNDGLPGPAGPPGPVGPSGAPGFPGSPGAKGEAGPTGARGPEGAQGPRGESGTPGSPGP 407

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIP------------------------GKDGLPGKDGI 231
            G     G PG DGIPG  G  G P                        G  G  G  GI
Sbjct: 408 SGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGI 464

Query: 232 P------------------GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           P                  G NG  GE+G  GPRG  G +G  G PG
Sbjct: 465 PGFKGEAGPKGEIGPPGLQGPNGPQGEEGKRGPRGEPGSAGPRGPPG 511



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 81/179 (45%), Gaps = 45/179 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
            P G  GP G  G+ G KGE G  G++G+ GAPG  GP   PGP G  G  G +G +G  G
Sbjct: 836  PAGFAGPPGADGQPGTKGEQGEPGQKGDAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQG 895

Query: 168  YPGPQGIPGDEGK------------------------RGPKGDMGYPGR---IGLDGRDG 200
             PG  G PG  G+                        +G +GD G PGR    GL G  G
Sbjct: 896  PPGATGFPGAAGRVGPPGPNGNPGPPGPAGPPGKDGPKGVRGDGGPPGRQGDAGLRGPAG 955

Query: 201  LPGEPG---------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
              GE G                 G+ G+ G+ G+PG+ G  G  G+PG +G  G++G +
Sbjct: 956  ASGEKGDAGEDGPPGPPGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAS 1014



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPG 176
           +KGE G  G  G  G RG  G  G  GPPGP G    PG +G+ G KG+ G PG +   G
Sbjct: 806 EKGESGPAGPSGAPGVRGAPGDRGETGPPGPAGFAGPPGADGQPGTKGEQGEPGQK---G 862

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           D G  GP+G  G PG  G  G  G  G  G  G PG  G  G  G+
Sbjct: 863 DAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGR 908



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 80/212 (37%), Gaps = 69/212 (32%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP--------- 150
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 855  QGEPGQKGDAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPPGP 914

Query: 151  ------------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------ 180
                              +G+ GD G  G +GD G  GP G  G++G             
Sbjct: 915  NGNPGPPGPAGPPGKDGPKGVRGDGGPPGRQGDAGLRGPAGASGEKGDAGEDGPPGPPGP 974

Query: 181  ------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------------- 217
                   G +G +G PG+    G  G PG PG  G PG+ G                   
Sbjct: 975  SGPQGLAGQRGIVGLPGQR---GERGFPGLPGPSGEPGKQGASGGPGDRGPPGPVGPPGL 1031

Query: 218  ----GIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                G PG++G PG DG PG +G+ G KG  G
Sbjct: 1032 TGPAGEPGREGTPGSDGPPGRDGSPGNKGERG 1063



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 79/196 (40%), Gaps = 48/196 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G  GP G +G  G  G  G+KG RG       KG  G VG  G  G PG+ G  GP G  
Sbjct: 271 GPSGPQGARGFPGTPGLPGIKGHRGYPGRDGAKGETGAVGAKGESGSPGESGAPGPMGPR 330

Query: 167 GYPGPQ------------------------------------GIPGDEGKRGPKGDMGYP 190
           G PG +                                    G PG +G+ GP G  G  
Sbjct: 331 GLPGERGRPGASGAAGARGNDGLPGPAGPPGPVGPSGAPGFPGSPGAKGEAGPTGARGPE 390

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP------GTNGTNGEKGMT 244
           G  G  G  G PG PG  G  G  G DGIPG  G  G  GI       G  G  G +G T
Sbjct: 391 GAQGPRGESGTPGSPGPSGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGAT 450

Query: 245 GPRGNRGKSGINGVPG 260
           GP G +G SG  G+PG
Sbjct: 451 GPLGPKGTSGDPGIPG 466



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 68/188 (36%), Gaps = 66/188 (35%)

Query: 133 KGERGEKGAPGV---------------------VGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           +G  GE G PG                       G PG     G+ G  GP+G  G+PG 
Sbjct: 228 QGNPGEAGEPGQSGPMGPRGPPGPPGKPGDDGEAGKPGKS---GERGPSGPQGARGFPGT 284

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK--- 228
            G+PG +G R      GYPGR G  G  G  G  G  G PG +G  G  G  GLPG+   
Sbjct: 285 PGLPGIKGHR------GYPGRDGAKGETGAVGAKGESGSPGESGAPGPMGPRGLPGERGR 338

Query: 229 ---------------------------------DGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                                             G PG  G  G  G  GP G +G  G 
Sbjct: 339 PGASGAAGARGNDGLPGPAGPPGPVGPSGAPGFPGSPGAKGEAGPTGARGPEGAQGPRGE 398

Query: 256 NGVPGTPA 263
           +G PG+P 
Sbjct: 399 SGTPGSPG 406



 Score = 39.7 bits (91), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 79/204 (38%), Gaps = 69/204 (33%)

Query: 111  PPGLQGPIGQKGEIGAKGE---------------------------MGVKGERGEKGAPG 143
            PPG QG  G +G  GA GE                           +G+ G+RGE+G PG
Sbjct: 941  PPGRQGDAGLRGPAGASGEKGDAGEDGPPGPPGPSGPQGLAGQRGIVGLPGQRGERGFPG 1000

Query: 144  VVGPPGPQGIPGDEGKR---------------------GPKGDMGYPGPQGIPGDEGKRG 182
            +   PGP G PG +G                       G  G  G PG  G PG +G  G
Sbjct: 1001 L---PGPSGEPGKQGASGGPGDRGPPGPVGPPGLTGPAGEPGREGTPGSDGPPGRDGSPG 1057

Query: 183  PKGDMG---------------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             KG+ G                 G +G  G+ G  GEPG  G  G +G  G     G+PG
Sbjct: 1058 NKGERGNTGPAGAPGAPGAPGANGPVGPTGKQGDRGEPGPQGPAGSSGPAGA---RGMPG 1114

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRG 251
              G  G  G  GE G  G +G+RG
Sbjct: 1115 PQGPRGDKGEAGEAGERGQKGHRG 1138


>gi|391341640|ref|XP_003745135.1| PREDICTED: collagen alpha-1(II) chain-like [Metaseiulus
           occidentalis]
          Length = 1484

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 91/168 (54%), Gaps = 9/168 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------- 164
           PG+ GP G  G  G +G  G  G +GE GA G  G PGPQG+ G  GK G +G       
Sbjct: 442 PGVPGPKGVAGNPGDQGHKGDSGPKGEAGALGPRGFPGPQGVAGKRGKTGAQGPPGPIGP 501

Query: 165 --DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             + G PGP+G+PG +G  G KG+ G  G +G  G  G  G+ G  G+PG  G+ G PG 
Sbjct: 502 QGERGTPGPRGLPGPDGLPGQKGEQGIAGSLGPMGPKGSTGDNGKPGLPGLQGLRGTPGL 561

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            GLPGKDG+PG  G  G  G TG  G +G  G+ G  G P +   + E
Sbjct: 562 PGLPGKDGVPGVRGLPGADGKTGEPGQQGLQGLPGPTGLPGMKGEQGE 609



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 98/167 (58%), Gaps = 15/167 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------P 162
           PG QG  G++G+ GA+G  G  G +GE+G PG  G PGP G+PG +G++G         P
Sbjct: 478 PGPQGVAGKRGKTGAQGPPGPIGPQGERGTPGPRGLPGPDGLPGQKGEQGIAGSLGPMGP 537

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG  G  G  G+PG +G RG  G  G PG+ G+ G  GLPG  G  G PG+ G+ G+PG 
Sbjct: 538 KGSTGDNGKPGLPGLQGLRGTPGLPGLPGKDGVPGVRGLPGADGKTGEPGQQGLQGLPGP 597

Query: 223 DGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKS---GINGVPGTPA 263
            GLP   G+ G PG +G  G +G  GPRG+ GK    G+ G+PG P 
Sbjct: 598 TGLPGMKGEQGEPGLDGKPGAQGPQGPRGDTGKEGPMGMVGLPGKPG 644



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 81/146 (55%), Gaps = 3/146 (2%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G  G  G  G+ G++GE+G  G +GP GP+G  GD GK G  G  G  G  G+PG  
Sbjct: 506 GTPGPRGLPGPDGLPGQKGEQGIAGSLGPMGPKGSTGDNGKPGLPGLQGLRGTPGLPGLP 565

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           GK G  G  G P   G DG+ G PG+ GL G+PG  G+ G+ G+ G PG DG PG  G  
Sbjct: 566 GKDGVPGVRGLP---GADGKTGEPGQQGLQGLPGPTGLPGMKGEQGEPGLDGKPGAQGPQ 622

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAI 264
           G +G TG  G  G  G+ G PG P +
Sbjct: 623 GPRGDTGKEGPMGMVGLPGKPGEPGL 648



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 89/164 (54%), Gaps = 15/164 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
           PGLQG  G  G  G  G+ GV G RG  GA G  G PG QG+   PG  G  G KG+ G 
Sbjct: 550 PGLQGLRGTPGLPGLPGKDGVPGVRGLPGADGKTGEPGQQGLQGLPGPTGLPGMKGEQGE 609

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------MDGIPGK 222
           PG  G PG +G +GP+GD G  G +G+ G  G PGEPGL G PG  G      + GI G 
Sbjct: 610 PGLDGKPGAQGPQGPRGDTGKEGPMGMVGLPGKPGEPGLRGPPGLQGSRGFQGLPGIVGN 669

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
            G PGKDG PG  G  G  G TG RG R      GK GI G PG
Sbjct: 670 PGAPGKDGGPGVQGPPGAPGATGSRGERGFQGETGKQGIQGPPG 713



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 82/153 (53%), Gaps = 6/153 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P GL G  G++G  G+ G MG KG  G+ G PG+   PG QG+ G  G  G  G  G PG
Sbjct: 516 PDGLPGQKGEQGIAGSLGPMGPKGSTGDNGKPGL---PGLQGLRGTPGLPGLPGKDGVPG 572

Query: 171 PQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            +G+PG +GK G  G     G PG  GL G  G  GEPGLDG PG  G  G  G  G  G
Sbjct: 573 VRGLPGADGKTGEPGQQGLQGLPGPTGLPGMKGEQGEPGLDGKPGAQGPQGPRGDTGKEG 632

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G  G  GE G+ GP G +G  G  G+PG
Sbjct: 633 PMGMVGLPGKPGEPGLRGPPGLQGSRGFQGLPG 665



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/138 (44%), Positives = 74/138 (53%), Gaps = 15/138 (10%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
             G +G  G +GERGE G  GV GP GP+G PG  G +G KGD G  G +G+   +G RG 
Sbjct: 1075 AGQRGATGERGERGEPGPAGVAGPHGPRGAPGVPGIQGAKGDRGEVGDRGL---KGHRGL 1131

Query: 184  KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G  G PG  G  G  G PG  G  G+ G  G  G PG+DG PG  G+         +G 
Sbjct: 1132 AGLQGLPGPAGPAGERGAPGPAGSSGLTGPQGPRGTPGRDGSPGPQGV---------QGA 1182

Query: 244  TGPRGNRGKSGINGVPGT 261
            +GPRG    +G NG PGT
Sbjct: 1183 SGPRG---PAGENGKPGT 1197



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 92/200 (46%), Gaps = 57/200 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQ---GIPGDEGKRGP 162
            PGLQGP G  G  G +GE G++G+ G  G  G      V GPPGPQ   G PG+EGK+GP
Sbjct: 982  PGLQGPKGPYGPRGPQGERGLEGKPGADGPAGPVGLQGVQGPPGPQGERGTPGNEGKQGP 1041

Query: 163  ------------------------------------------KGDMGYPGPQGIPGDEGK 180
                                                      +G+ G PGP G+    G 
Sbjct: 1042 PGIAGRVGDKGPQGSPGSQGPPGPPGLIGPLGPAGQRGATGERGERGEPGPAGV---AGP 1098

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
             GP+G  G PG  G  G  G  G+ GL G  G  G+ G+PG  G  G+ G PG  G++  
Sbjct: 1099 HGPRGAPGVPGIQGAKGDRGEVGDRGLKGHRGLAGLQGLPGPAGPAGERGAPGPAGSS-- 1156

Query: 241  KGMTGPRGNRGKSGINGVPG 260
             G+TGP+G RG  G +G PG
Sbjct: 1157 -GLTGPQGPRGTPGRDGSPG 1175



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 84/166 (50%), Gaps = 24/166 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GQ+G  G  G  G+ G +GE+G PG+ G PG   PQG  GD GK GP G +G P   G P
Sbjct: 587 GQQGLQGLPGPTGLPGMKGEQGEPGLDGKPGAQGPQGPRGDTGKEGPMGMVGLP---GKP 643

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------------GIPGRNGMDGIP 220
           G+ G RGP G  G  G  GL G  G PG PG D               G  G  G  G  
Sbjct: 644 GEPGLRGPPGLQGSRGFQGLPGIVGNPGAPGKDGGPGVQGPPGAPGATGSRGERGFQGET 703

Query: 221 GKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           GK G+   PG+ G PG  G +G +G+TG +G +G  G  G+ G P 
Sbjct: 704 GKQGIQGPPGERGDPGPAGQDGARGVTGEKGAKGHQGPPGLVGLPG 749



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 88/185 (47%), Gaps = 18/185 (9%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP--------- 150
            QG         P GLQGP G +GE G KG++G+ G  G  G  G  G PG          
Sbjct: 862  QGPPGDIGPLGPIGLQGPKGPRGEPGLKGDIGLPGLPGRPGETGRAGEPGAIGAPGPMGP 921

Query: 151  ---QGIPGDEGKRGPKGDMGYPGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
               +G+ G+ G+ GP+G  G PGP G P   GD G  GP G  G  G  G  G  GLPG 
Sbjct: 922  PGIKGVTGEPGRVGPQGQQGNPGPIGQPGIKGDGGAEGPAGQSGPVGPPGPQGERGLPGL 981

Query: 205  PGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PGL G  G  G  G  G+ GL   PG DG  G  G  G +G  GP+G RG  G  G  G 
Sbjct: 982  PGLQGPKGPYGPRGPQGERGLEGKPGADGPAGPVGLQGVQGPPGPQGERGTPGNEGKQGP 1041

Query: 262  PAICA 266
            P I  
Sbjct: 1042 PGIAG 1046



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 85/164 (51%), Gaps = 27/164 (16%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGYPGPQGIPGDE 178
            G IGAKGE   +G+ G +G PG +GP GP G+ G +G RG    KGD+G PG  G PG+ 
Sbjct: 848  GAIGAKGE---QGKSGPQGPPGDIGPLGPIGLQGPKGPRGEPGLKGDIGLPGLPGRPGET 904

Query: 179  GKRGP---------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG----- 218
            G+ G                KG  G PGR+G  G+ G PG  G  GI G  G +G     
Sbjct: 905  GRAGEPGAIGAPGPMGPPGIKGVTGEPGRVGPQGQQGNPGPIGQPGIKGDGGAEGPAGQS 964

Query: 219  -IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
               G  G  G+ G+PG  G  G KG  GPRG +G+ G+ G PG 
Sbjct: 965  GPVGPPGPQGERGLPGLPGLQGPKGPYGPRGPQGERGLEGKPGA 1008



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 78/158 (49%), Gaps = 24/158 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP G +G+ G +G MG+ G  G+ G PG+ GPPG QG          +G  G PG 
Sbjct: 616 PGAQGPQGPRGDTGKEGPMGMVGLPGKPGEPGLRGPPGLQGS---------RGFQGLPGI 666

Query: 172 QGIPGDEGK---------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G PG  GK                G +G+ G+ G  G  G  G PGE G  G  G++G 
Sbjct: 667 VGNPGAPGKDGGPGVQGPPGAPGATGSRGERGFQGETGKQGIQGPPGERGDPGPAGQDGA 726

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G+ G+ G  G  G PG  G  G +G  GP G++G+ G
Sbjct: 727 RGVTGEKGAKGHQGPPGLVGLPGRRGDIGPIGSKGERG 764



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 94/218 (43%), Gaps = 61/218 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG---------------------ERGEKGAPGVVGPPGP 150
            PG  GP GQ+G  G  G+ G+KG                     ERG  G PG+ GP GP
Sbjct: 931  PGRVGPQGQQGNPGPIGQPGIKGDGGAEGPAGQSGPVGPPGPQGERGLPGLPGLQGPKGP 990

Query: 151  QGIPGDEGKRG---------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--- 198
             G  G +G+RG         P G +G  G QG PG +G+RG  G+ G  G  G+ GR   
Sbjct: 991  YGPRGPQGERGLEGKPGADGPAGPVGLQGVQGPPGPQGERGTPGNEGKQGPPGIAGRVGD 1050

Query: 199  ---------------------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                                        G  GE G  G PG  G+ G  G  G PG  GI
Sbjct: 1051 KGPQGSPGSQGPPGPPGLIGPLGPAGQRGATGERGERGEPGPAGVAGPHGPRGAPGVPGI 1110

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
             G  G  GE G  G +G+RG +G+ G+PG PA  A +R
Sbjct: 1111 QGAKGDRGEVGDRGLKGHRGLAGLQGLPG-PAGPAGER 1147



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 85/188 (45%), Gaps = 57/188 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGER---------------GEKGAPGVVGPPGPQGI--- 153
           PG+QGP+G  G IG   E G+KGE                G++GA   +GPPGP G    
Sbjct: 781 PGIQGPVGPVGHIG---EPGIKGESGPPGPMGPTGAPGQVGDRGA---IGPPGPVGFQGP 834

Query: 154 ---------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                     G+ G  G KG+ G  GPQG         P GD+G  G IGL G  G  GE
Sbjct: 835 LGPPGPSGPKGNTGAIGAKGEQGKSGPQG---------PPGDIGPLGPIGLQGPKGPRGE 885

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGT------------NGTNGEKGMTGPRGNRGK 252
           PGL    G  G+ G+PG+ G  G+ G PG              G  GE G  GP+G +G 
Sbjct: 886 PGLK---GDIGLPGLPGRPGETGRAGEPGAIGAPGPMGPPGIKGVTGEPGRVGPQGQQGN 942

Query: 253 SGINGVPG 260
            G  G PG
Sbjct: 943 PGPIGQPG 950



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 94/245 (38%), Gaps = 73/245 (29%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           V   G    T E   PG QGP G +G  G  G  G+ G +G +G PG+ GP G  G PG+
Sbjct: 244 VGPTGKDGDTGEDGKPGAQGPPGTQGPRGLPGMSGLPGPKGHRGYPGLDGPKGETGAPGE 303

Query: 157 E------------------GKRGPKGDMGYPGPQGI------------------------ 174
           +                  G RG +G  G  GP GI                        
Sbjct: 304 KGSLGPPGKPGPSGPVGPAGPRGERGREGPAGPTGIRGTDGQIGPPGPPGSAGRSGPPGF 363

Query: 175 ------PGDEGKRGPKGDMGYPGRIGLDG---------------RDGLPGE--------- 204
                  GD G +GPKG  G  G  G  G               +DG PG+         
Sbjct: 364 PGAPGMKGDAGSQGPKGSAGLQGPRGESGIPGSTGEPGPTGPPGKDGAPGDKGSRGDSGA 423

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G+ G PG  G  G+ G  G+PG  G+ G  G  G KG +GP+G  G  G  G PG P  
Sbjct: 424 AGIPGFPGPRGPQGLAGSPGVPGPKGVAGNPGDQGHKGDSGPKGEAGALGPRGFPG-PQG 482

Query: 265 CAYKR 269
            A KR
Sbjct: 483 VAGKR 487



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 65/131 (49%), Gaps = 15/131 (11%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------- 152
           QG    T +  P G+ G  G+ GE G +G  G++G RG +G PG+VG PG  G       
Sbjct: 622 QGPRGDTGKEGPMGMVGLPGKPGEPGLRGPPGLQGSRGFQGLPGIVGNPGAPGKDGGPGV 681

Query: 153 --------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                     G  G+RG +G+ G  G QG PG+ G  GP G  G  G  G  G  G  G 
Sbjct: 682 QGPPGAPGATGSRGERGFQGETGKQGIQGPPGERGDPGPAGQDGARGVTGEKGAKGHQGP 741

Query: 205 PGLDGIPGRNG 215
           PGL G+PGR G
Sbjct: 742 PGLVGLPGRRG 752



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 61/127 (48%), Gaps = 18/127 (14%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E  P G+ GP G +G  G  G  G KG+RGE G  G+ G  G  G+ G  G  GP G+ G
Sbjct: 1089 EPGPAGVAGPHGPRGAPGVPGIQGAKGDRGEVGDRGLKGHRGLAGLQGLPGPAGPAGERG 1148

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             PGP G  G  G +GP+                  G PG DG PG  G+ G  G  G  G
Sbjct: 1149 APGPAGSSGLTGPQGPR------------------GTPGRDGSPGPQGVQGASGPRGPAG 1190

Query: 228  KDGIPGT 234
            ++G PGT
Sbjct: 1191 ENGKPGT 1197



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 57/122 (46%), Gaps = 15/122 (12%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQ------------GIPGDEGKRGPKGDMGYPGRIGLD 196
           G QG  G  G +GP+G+ G PG              G PGD+G RG  G  G PG  G  
Sbjct: 374 GSQGPKGSAGLQGPRGESGIPGSTGEPGPTGPPGKDGAPGDKGSRGDSGAAGIPGFPGPR 433

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  GL G P   G+PG  G+ G PG  G  G  G  G  G  G +G  GP+G  GK G  
Sbjct: 434 GPQGLAGSP---GVPGPKGVAGNPGDQGHKGDSGPKGEAGALGPRGFPGPQGVAGKRGKT 490

Query: 257 GV 258
           G 
Sbjct: 491 GA 492


>gi|358334139|dbj|GAA52592.1| collagen type I/II/III/V/XI alpha [Clonorchis sinensis]
          Length = 1294

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 86/159 (54%), Gaps = 9/159 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGD 165
           PG  GP+G +G   + GE G+ G  G+ G PG+ GPPG      PQG  G +G+ GPKGD
Sbjct: 220 PGEPGPVGSRG---STGETGLPGSSGDPGRPGLDGPPGLDGEQGPQGPEGKDGRPGPKGD 276

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G+ GP G  G  G RG  G  G PG  G  G  G  G PG  G+PG  G  G  G  G 
Sbjct: 277 TGFRGPVGPEGMPGPRGSTGAPGMPGEQGAKGAVGEAGPPGNRGLPGNAGQPGGIGLQGP 336

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G+ G PG  G  G +GM GP+G+ G  G +G PG P +
Sbjct: 337 QGQPGAPGKEGIMGPRGMPGPKGSTGAMGASGSPGRPGV 375



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 95/178 (53%), Gaps = 27/178 (15%)

Query: 111 PPGL------QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           PPGL      QGP G+ G  G KG+ G +G  G +G PG  G  G  G+PG++G +G  G
Sbjct: 252 PPGLDGEQGPQGPEGKDGRPGPKGDTGFRGPVGPEGMPGPRGSTGAPGMPGEQGAKGAVG 311

Query: 165 DMGYPGPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           + G PG +G+PG+ G+      +GP+G  G PG+ G+ G  G+PG  G  G  G +G  G
Sbjct: 312 EAGPPGNRGLPGNAGQPGGIGLQGPQGQPGAPGKEGIMGPRGMPGPKGSTGAMGASGSPG 371

Query: 219 IPGKDG---------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG DG                 G  G PG NG  G+ G TGP G+ G++G +G PGT
Sbjct: 372 RPGVDGRPGLPGPPGKTGPLGRAGPRGEPGQNGLVGKPGRTGPVGSPGENGRDGTPGT 429



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 97/223 (43%), Gaps = 71/223 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG-------------------------------- 140
           G QGP G++G  G  G  GVKGE+G +G                                
Sbjct: 464 GHQGPQGERGLPGPAGPAGVKGEKGMRGYPGDAGAAGDAGATGPQGKPGPIGERGGVGPV 523

Query: 141 ----APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------- 186
               APG +G  G  G PGD GK G  G  G  G  G+PG  G +GP G           
Sbjct: 524 GNVGAPGQIGIRGAIGAPGDPGKDGQPGTNGTDGEAGVPGQPGPQGPMGQAGPPGPRGGP 583

Query: 187 -----------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                      +G PGR+G+ G  G+PG+PG DG PG  G  GI G +GLPG+DG PG  
Sbjct: 584 GEPGEKGNMGPIGIPGRMGVMGIPGVPGQPGPDGAPGPRGDRGISGINGLPGQDGQPGPQ 643

Query: 236 GTNGEKG--------------MTGPRGNRGKSGINGVPGTPAI 264
           G  G +G              M GP G+ G++G+ G PG P +
Sbjct: 644 GLRGPRGAPGIIQILATSQALMLGPPGDMGEAGVAGEPGIPGL 686



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 92/205 (44%), Gaps = 48/205 (23%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP- 169
           P G+ GP G  G  G  GE G KG  GE G PG  G PG  G PG  G +GP+G  G P 
Sbjct: 285 PEGMPGPRGSTGAPGMPGEQGAKGAVGEAGPPGNRGLPGNAGQPGGIGLQGPQGQPGAPG 344

Query: 170 -----GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------------------GLPGEPG 206
                GP+G+PG +G  G  G  G PGR G+DGR                   G PG+ G
Sbjct: 345 KEGIMGPRGMPGPKGSTGAMGASGSPGRPGVDGRPGLPGPPGKTGPLGRAGPRGEPGQNG 404

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGT------------------NGTNGEKGMTGPRG 248
           L G PGR G  G PG++   G+DG PGT                   G  G  G  GP+G
Sbjct: 405 LVGKPGRTGPVGSPGEN---GRDGTPGTVGQPGPRGPPGKAGQSGHPGVAGAAGPPGPQG 461

Query: 249 N---RGKSGINGVPGTPAICAYKRE 270
           N   +G  G  G+PG       K E
Sbjct: 462 NIGHQGPQGERGLPGPAGPAGVKGE 486



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 112/271 (41%), Gaps = 85/271 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV------------KGERGEKGAPGVVGPPGPQGIPGDEGK 159
           PG  GP+G  GE G  G  G              G+ G  G  G  GPPGPQG  G +G 
Sbjct: 409 PGRTGPVGSPGENGRDGTPGTVGQPGPRGPPGKAGQSGHPGVAGAAGPPGPQGNIGHQGP 468

Query: 160 RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG---------------Y 189
           +G +G  G  GP G+ G++G RG               P+G  G                
Sbjct: 469 QGERGLPGPAGPAGVKGEKGMRGYPGDAGAAGDAGATGPQGKPGPIGERGGVGPVGNVGA 528

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIPGKD----------------------- 223
           PG+IG+ G  G PG+PG DG PG NG D   G+PG+                        
Sbjct: 529 PGQIGIRGAIGAPGDPGKDGQPGTNGTDGEAGVPGQPGPQGPMGQAGPPGPRGGPGEPGE 588

Query: 224 -------GLPGK---DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT-----PAICAYK 268
                  G+PG+    GIPG  G  G  G  GPRG+RG SGING+PG      P      
Sbjct: 589 KGNMGPIGIPGRMGVMGIPGVPGQPGPDGAPGPRGDRGISGINGLPGQDGQPGPQGLRGP 648

Query: 269 RESCSLLPNSETSQLLI--PPTIVGSEHIFS 297
           R +  ++    TSQ L+  PP  +G   +  
Sbjct: 649 RGAPGIIQILATSQALMLGPPGDMGEAGVAG 679



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 77/181 (42%), Gaps = 39/181 (21%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPG---------------------VVGP---------- 147
           G KGE G  G  G +G RG+ GAPG                      +GP          
Sbjct: 149 GAKGERGDTGRDGDEGARGDSGAPGPMGRPGPRGDPGPMGPPGTPGQIGPSGADGPPGPQ 208

Query: 148 --------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                   PG  G PG  G RG  G+ G PG  G PG  G  GP G  G  G  G +G+D
Sbjct: 209 GPTGPQGLPGQPGEPGPVGSRGSTGETGLPGSSGDPGRPGLDGPPGLDGEQGPQGPEGKD 268

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G PG  G  G  G  G +G+PG  G  G  G+PG  G  G  G  GP GNRG  G  G P
Sbjct: 269 GRPGPKGDTGFRGPVGPEGMPGPRGSTGAPGMPGEQGAKGAVGEAGPPGNRGLPGNAGQP 328

Query: 260 G 260
           G
Sbjct: 329 G 329



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 48/95 (50%), Gaps = 3/95 (3%)

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
           +PG  G+ GP G  G  G  GL G  G PG PGLDG P   G+DG  G  G  GKDG PG
Sbjct: 216 LPGQPGEPGPVGSRGSTGETGLPGSSGDPGRPGLDGPP---GLDGEQGPQGPEGKDGRPG 272

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G +G  GP G  G  G  G PG P     K
Sbjct: 273 PKGDTGFRGPVGPEGMPGPRGSTGAPGMPGEQGAK 307



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 83/171 (48%), Gaps = 30/171 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG-------------- 158
           GLQGP GQ G  G +G MG +G  G KG+ G +G  G  G PG +G              
Sbjct: 332 GLQGPQGQPGAPGKEGIMGPRGMPGPKGSTGAMGASGSPGRPGVDGRPGLPGPPGKTGPL 391

Query: 159 -KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------EPGLDGIP 211
            + GP+G+   PG  G+ G  G+ GP   +G PG    +GRDG PG        G  G  
Sbjct: 392 GRAGPRGE---PGQNGLVGKPGRTGP---VGSPGE---NGRDGTPGTVGQPGPRGPPGKA 442

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           G++G  G+ G  G PG  G  G  G  GE+G+ GP G  G  G  G+ G P
Sbjct: 443 GQSGHPGVAGAAGPPGPQGNIGHQGPQGERGLPGPAGPAGVKGEKGMRGYP 493



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 46/90 (51%), Gaps = 15/90 (16%)

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGY 189
           +GP GPQG+PG +G +G  G  G PG QG PG +GK                G  GD G 
Sbjct: 753 IGPVGPQGLPGRQGSQGVLGKSGLPGAQGEPGIQGKPGNIGPVGPPGVPGKDGESGDPGL 812

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           PG  G  G  G PG PG DG+ G  GM G+
Sbjct: 813 PGAAGEIGEVGSPGSPGRDGVAGAMGMRGM 842



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 71/186 (38%), Gaps = 59/186 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
           G+ G  GQ G  GA G  G +G  G  G PG  G PGPQG+ G  G  G           
Sbjct: 605 GIPGVPGQPGPDGAPGPRGDRGISGINGLPGQDGQPGPQGLRGPRGAPGIIQILATSQAL 664

Query: 162 ---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---------------DGLPG 203
              P GDMG  G  G PG  G  G +G  G PG IG+ G+                G PG
Sbjct: 665 MLGPPGDMGEAGVAGEPGIPGLDGQEGPSGPPGAIGISGKRGPAGPPGAAGIPGKSGTPG 724

Query: 204 EPGL------------------------------DGIPGRNGMDGIPGKDGLPGKDGIPG 233
            PG                                G+PGR G  G+ GK GLPG  G PG
Sbjct: 725 SPGSPGSTGPVGIQGPPGIPGPVGAPGEIGPVGPQGLPGRQGSQGVLGKSGLPGAQGEPG 784

Query: 234 TNGTNG 239
             G  G
Sbjct: 785 IQGKPG 790



 Score = 39.7 bits (91), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 6/58 (10%)

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           G PG+ G++GP G+ G        G+ G PGE GL G PG +G DG  G  GLPG  G
Sbjct: 934 GPPGERGRQGPAGERGT------AGKPGTPGEAGLKGPPGEDGKDGEDGAAGLPGSPG 985


>gi|312385983|gb|EFR30362.1| hypothetical protein AND_00093 [Anopheles darlingi]
          Length = 1070

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 78/159 (49%), Gaps = 3/159 (1%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              QG      E    GL GP G  G  G +G  G +G  G +G+PG  G  GP G PGD
Sbjct: 193 AGAQGTTGVAGEKGDRGLPGPQGNIGLTGPQGMPGTQGSPGLRGSPGPSGEIGPVGKPGD 252

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G  G++G  GP+G   D G+RG KG  G  G +GL G  G  G+ G+ G  G  G 
Sbjct: 253 AGAPGKAGEVGAKGPKG---DRGRRGVKGHRGELGLVGLKGDAGEKGDKGIRGTSGPEGS 309

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G PG  G  G  G  G  G  G  G TGP+G  G +G+
Sbjct: 310 KGEPGPLGPLGPKGNDGPQGPPGHDGPTGPKGTDGVAGL 348



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 85/194 (43%), Gaps = 60/194 (30%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------------GPKGDMGY 168
           +GE G  G +GE+G  GV GPPG +G+PG EG +                  GPKG++G 
Sbjct: 97  EGEKGAIGPKGEEGKSGVPGPPGKRGLPGPEGAKGVAGPPGFPGSPGEPGLVGPKGEIGK 156

Query: 169 ---------------------------------PGPQGIPGDEGKRGPKGDMGYP---GR 192
                                             GP G  G  G  G KGD G P   G 
Sbjct: 157 DGDDGKQGEPGTPGEIGPPGPPGELGPPGKVGPEGPAGAQGTTGVAGEKGDRGLPGPQGN 216

Query: 193 IGLDGRDGLP---GEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
           IGL G  G+P   G PGL G PG +G     G PG  G PGK G  G  G  G++G  G 
Sbjct: 217 IGLTGPQGMPGTQGSPGLRGSPGPSGEIGPVGKPGDAGAPGKAGEVGAKGPKGDRGRRGV 276

Query: 247 RGNRGKSGINGVPG 260
           +G+RG+ G+ G+ G
Sbjct: 277 KGHRGELGLVGLKG 290



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 80/166 (48%), Gaps = 24/166 (14%)

Query: 113 GLQGPIGQKGEIGAKGE---------------------MGVKGERGEKGAPGVVGPPGPQ 151
           G +G IG+ G+ G +GE                     +G +G  G +G  GV G  G +
Sbjct: 149 GPKGEIGKDGDDGKQGEPGTPGEIGPPGPPGELGPPGKVGPEGPAGAQGTTGVAGEKGDR 208

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLPGEPGLD 208
           G+PG +G  G  G  G PG QG PG  G  GP G++   G PG  G  G+ G  G  G  
Sbjct: 209 GLPGPQGNIGLTGPQGMPGTQGSPGLRGSPGPSGEIGPVGKPGDAGAPGKAGEVGAKGPK 268

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  GR G+ G  G+ GL G  G  G  G  G +G +GP G++G+ G
Sbjct: 269 GDRGRRGVKGHRGELGLVGLKGDAGEKGDKGIRGTSGPEGSKGEPG 314



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 84/227 (37%), Gaps = 93/227 (40%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------------------KRGPK 163
           G  G KGE G  G PG  GP GPQG+PG  G                        +RGP+
Sbjct: 2   GRNGPKGEDGPTGLPGSPGPAGPQGMPGPSGMKGDRGDDGPVGPVGPAGPPGEPGRRGPR 61

Query: 164 GDMGYPGPQGIPGDEGKRGP---------------KGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  G PG  G PG +G  G                +G+ G  G  G +G+ G+PG PG  
Sbjct: 62  GAEGSPGAAGSPGPQGIAGEAGPQGPPGPIGPEGKEGEKGAIGPKGEEGKSGVPGPPGKR 121

Query: 209 GIPGRNGMDGIP---------------------GKDGLPGKD------------------ 229
           G+PG  G  G+                      GKDG  GK                   
Sbjct: 122 GLPGPEGAKGVAGPPGFPGSPGEPGLVGPKGEIGKDGDDGKQGEPGTPGEIGPPGPPGEL 181

Query: 230 ------------GIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGT 261
                       G  GT G  GEK   G+ GP+GN G +G  G+PGT
Sbjct: 182 GPPGKVGPEGPAGAQGTTGVAGEKGDRGLPGPQGNIGLTGPQGMPGT 228



 Score = 42.7 bits (99), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 45/119 (37%), Gaps = 45/119 (37%)

Query: 187 MGYPGRIGLDGRDGLPGEP---GLDGIPGRNGMDGIPGKD-------------------- 223
           MG  G  G DG  GLPG P   G  G+PG +GM G  G D                    
Sbjct: 1   MGRNGPKGEDGPTGLPGSPGPAGPQGMPGPSGMKGDRGDDGPVGPVGPAGPPGEPGRRGP 60

Query: 224 ----GLPGKDGIPGTNGT------------------NGEKGMTGPRGNRGKSGINGVPG 260
               G PG  G PG  G                    GEKG  GP+G  GKSG+ G PG
Sbjct: 61  RGAEGSPGAAGSPGPQGIAGEAGPQGPPGPIGPEGKEGEKGAIGPKGEEGKSGVPGPPG 119



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 33/65 (50%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           LV ++G      +    G  GP G KGE G  G +G KG  G +G PG  GP GP+G  G
Sbjct: 285 LVGLKGDAGEKGDKGIRGTSGPEGSKGEPGPLGPLGPKGNDGPQGPPGHDGPTGPKGTDG 344

Query: 156 DEGKR 160
             G R
Sbjct: 345 VAGLR 349


>gi|109659989|gb|ABG36940.1| type II collagen alpha 1A [Myxine glutinosa]
          Length = 738

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 92/168 (54%), Gaps = 6/168 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G+ G+ G  G  G +G  G  GAPG+VGP G QG  G+ G+ G  G  G PGP
Sbjct: 252 PGLPGPSGEPGKQGPHGSSGERGLPGSVGAPGMVGPQGEQGRDGNAGQDGAPGRDGAPGP 311

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGK 228
           +   G+ G+ GP G  G PG+ G  G  G  G+    G  G  G  G P   G  G+PG 
Sbjct: 312 K---GERGESGPSGQPGAPGQPGAPGHIGPAGKNDARGETGPQGPSGAPGPAGTRGIPGP 368

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G  G  G +GE+G  G +G+RG +G+ G+PG+P +   +  + SL P
Sbjct: 369 QGPRGEKGEHGEQGARGMKGHRGFTGLQGLPGSPGMHGDQGLAGSLGP 416



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 3/137 (2%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
            G +G +G+ G+RGE+G PG+   PGP G PG +G  G  G+ G PG  G PG  G +G 
Sbjct: 234 AGQRGTVGLPGQRGERGFPGL---PGPSGEPGKQGPHGSSGERGLPGSVGAPGMVGPQGE 290

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           +G  G  G+ G  GRDG PG  G  G  G +G  G PG+ G PG  G  G N   GE G 
Sbjct: 291 QGRDGNAGQDGAPGRDGAPGPKGERGESGPSGQPGAPGQPGAPGHIGPAGKNDARGETGP 350

Query: 244 TGPRGNRGKSGINGVPG 260
            GP G  G +G  G+PG
Sbjct: 351 QGPSGAPGPAGTRGIPG 367



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 71/163 (43%), Gaps = 45/163 (27%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIP---------------------------------GDE 157
           G KG RGE G PG  G PG QG P                                 G  
Sbjct: 184 GFKGIRGENGPPGRSGEPGLQGPPGPHGEKGEGGEDGPPGPEGPPGPQGLAGQRGTVGLP 243

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G+RG +G  G PGP G PG +G  G  G+ G PG +G          PG+ G  G  G D
Sbjct: 244 GQRGERGFPGLPGPSGEPGKQGPHGSSGERGLPGSVGA---------PGMVGPQGEQGRD 294

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G+DG PG+DG P   G  GE+G +GP G  G  G  G PG
Sbjct: 295 GNAGQDGAPGRDGAP---GPKGERGESGPSGQPGAPGQPGAPG 334



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 92/221 (41%), Gaps = 57/221 (25%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------- 152
           QG      +   PG QGP G  G +G  G  G KG RG +G PG  G PG  G       
Sbjct: 108 QGESGQRGDARSPGPQGPSGSPGPMGPAGVSGPKGARGSQGPPGATGFPGAAGRVGPPGP 167

Query: 153 -----------------IPGDEGKRGPKGDMGYPGPQGIPGDEGKR-------------- 181
                              G  G+ GP G  G PG QG PG  G++              
Sbjct: 168 SGNAGPPGPPGPSGKDGFKGIRGENGPPGRSGEPGLQGPPGPHGEKGEGGEDGPPGPEGP 227

Query: 182 -------GPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLP----- 226
                  G +G +G PG+ G  G  GLP   GEPG  G  G +G  G+PG  G P     
Sbjct: 228 PGPQGLAGQRGTVGLPGQRGERGFPGLPGPSGEPGKQGPHGSSGERGLPGSVGAPGMVGP 287

Query: 227 ----GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
               G+DG  G +G  G  G  GP+G RG+SG +G PG P 
Sbjct: 288 QGEQGRDGNAGQDGAPGRDGAPGPKGERGESGPSGQPGAPG 328



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 63/122 (51%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   +  +   PG  G  G KGE G  G  G  G  G+ GAPG +GP G     G+ G 
Sbjct: 291 QGRDGNAGQDGAPGRDGAPGPKGERGESGPSGQPGAPGQPGAPGHIGPAGKNDARGETGP 350

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +GP G  G  G +GIPG +G RG KG+ G  G  G+ G  G  G  GL G PG +G  G+
Sbjct: 351 QGPSGAPGPAGTRGIPGPQGPRGEKGEHGEQGARGMKGHRGFTGLQGLPGSPGMHGDQGL 410

Query: 220 PG 221
            G
Sbjct: 411 AG 412



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 94/255 (36%), Gaps = 105/255 (41%)

Query: 111 PPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGV---------VGPPGPQGIPGD-- 156
           PPGLQG  G++G  GA   KG+ G  GE+G +GAPG          +GP GP G PGD  
Sbjct: 2   PPGLQGMPGERGSAGAHGPKGDRGDGGEKGPEGAPGKDGTRGLTGPIGPHGPSGAPGDKG 61

Query: 157 -------------------------------------EGKRGPKGDMGYPGPQG---IPG 176
                                                +G+ GPKGD G  G +G    PG
Sbjct: 62  EAGPPGPSGSSGSRGTPGNRGEPGPPGPAGFAGPPGIDGQAGPKGDQGESGQRGDARSPG 121

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------------------------ 212
            +G  G  G MG  G  G  G  G  G PG  G PG                        
Sbjct: 122 PQGPSGSPGPMGPAGVSGPKGARGSQGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPSG 181

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGT---------------------------NGEKGMTG 245
           ++G  GI G++G PG+ G PG  G                             G++G  G
Sbjct: 182 KDGFKGIRGENGPPGRSGEPGLQGPPGPHGEKGEGGEDGPPGPEGPPGPQGLAGQRGTVG 241

Query: 246 PRGNRGKSGINGVPG 260
             G RG+ G  G+PG
Sbjct: 242 LPGQRGERGFPGLPG 256



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 98/286 (34%), Gaps = 111/286 (38%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG------ERGEKGAPG------ 143
           L  M G   S   + P G +G  G+KG  GA G+ G +G        G  GAPG      
Sbjct: 5   LQGMPGERGSAGAHGPKGDRGDGGEKGPEGAPGKDGTRGLTGPIGPHGPSGAPGDKGEAG 64

Query: 144 ---------------------------------VVGPPGPQGIPGDEGKR------GPKG 164
                                            + G  GP+G  G+ G+R      GP+G
Sbjct: 65  PPGPSGSSGSRGTPGNRGEPGPPGPAGFAGPPGIDGQAGPKGDQGESGQRGDARSPGPQG 124

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG------------------------RDG 200
             G PGP G  G  G +G +G  G PG  G  G                        +DG
Sbjct: 125 PSGSPGPMGPAGVSGPKGARGSQGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPSGKDG 184

Query: 201 LPGEPGLDGIPGRNGMDGIPGKD---------------------------------GLPG 227
             G  G +G PGR+G  G+ G                                   GLPG
Sbjct: 185 FKGIRGENGPPGRSGEPGLQGPPGPHGEKGEGGEDGPPGPEGPPGPQGLAGQRGTVGLPG 244

Query: 228 K---DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           +    G PG  G +GE G  GP G+ G+ G+ G  G P +   + E
Sbjct: 245 QRGERGFPGLPGPSGEPGKQGPHGSSGERGLPGSVGAPGMVGPQGE 290



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 63/163 (38%), Gaps = 48/163 (29%)

Query: 125 GAKGEMGVKGERGEKGAPGVV------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD- 177
           G  G  G+ GERG  GA G        G  GP+G PG +G RG  G +G  GP G PGD 
Sbjct: 1   GPPGLQGMPGERGSAGAHGPKGDRGDGGEKGPEGAPGKDGTRGLTGPIGPHGPSGAPGDK 60

Query: 178 --------------------------------------EGKRGPKGDMGYPGRIGLDGRD 199
                                                 +G+ GPKGD G  G+ G D R 
Sbjct: 61  GEAGPPGPSGSSGSRGTPGNRGEPGPPGPAGFAGPPGIDGQAGPKGDQGESGQRG-DARS 119

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             PG  G  G PG  G  G+ G  G  G  G PG  G  G  G
Sbjct: 120 --PGPQGPSGSPGPMGPAGVSGPKGARGSQGPPGATGFPGAAG 160


>gi|395821647|ref|XP_003784149.1| PREDICTED: collagen alpha-1(XI) chain isoform 4 [Otolemur
           garnettii]
          Length = 1690

 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 82/145 (56%), Gaps = 9/145 (6%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G  G +G  G+ G+ GP+G+ G  GP+G     
Sbjct: 647 GVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKG----- 701

Query: 179 GKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            + GP GD+G PG+ G  G+    GLPG PG  G  G  G  G PG +G  G  G+ G  
Sbjct: 702 -RAGPTGDLGPPGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKP 760

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G++G TGPRG+RG  G  G PG
Sbjct: 761 GPRGQRGPTGPRGSRGARGPTGKPG 785



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 58/119 (48%), Gaps = 24/119 (20%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDE 178
            G  G +GE G KGE G +G  G  GP GPQG     GK GP+G  G PGP   QG+PG  
Sbjct: 1253 GAEGRQGEKGAKGEAGAEGPSGKTGPVGPQGP---AGKPGPEGLRGIPGPVGEQGLPGAA 1309

Query: 179  GKR------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G+                   G KG+ G+PG IGL G  G  GE G  G+PG  G  G 
Sbjct: 1310 GQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGA 1368



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           + ++G      +  P G  GP G KG  G  G++G  G+ GEKG  GV       G+PG 
Sbjct: 676 MGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDLGPPGQAGEKGKLGVP------GLPGY 729

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            G++GPKG  G+P   G PG  G++G +G  G PG  G  G  G  G  G  G  G+ G
Sbjct: 730 PGRQGPKGSTGFP---GFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPG 785



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 62/128 (48%), Gaps = 27/128 (21%)

Query: 136 RGEKGAPGVVGPPGPQ------------GIPGDEGKRG------PKGDMGYPGPQGIPGD 177
           +GE G PG  GP G Q            G PG +G RG       KGD G+ G  G+PGD
Sbjct: 436 KGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPGLPGD 495

Query: 178 EGKRGPK---------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           +G RG +         GD G  G  G  G  GLPGE G  G+ G  G  GIPG+ G+ G 
Sbjct: 496 KGHRGERGPQGPPGAPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGIPGQPGMAGV 555

Query: 229 DGIPGTNG 236
           DG PG  G
Sbjct: 556 DGPPGPKG 563



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 60/122 (49%), Gaps = 33/122 (27%)

Query: 112 PGLQGPIG------------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           PG QGP G            ++G  GA G  G+ GE G KG  G  G PG   +PGD+G 
Sbjct: 442 PGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPG---LPGDKGH 498

Query: 160 RGPK---------------GDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGL 201
           RG +               G+ G  GP+G+PG+ G R   GP+G  G PG+ G+ G DG 
Sbjct: 499 RGERGPQGPPGAPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGIPGQPGMAGVDGP 558

Query: 202 PG 203
           PG
Sbjct: 559 PG 560



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 60/122 (49%), Gaps = 21/122 (17%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------LDGIPGRNGM 216
           KG+ G PGPQG  G +G  GP G  G  GR G DG  G+PGEPG       DG+PG  G 
Sbjct: 436 KGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPGLPGD 495

Query: 217 DGIPGK------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+            DG+ G+DG  G  G  GE    GPRG  G  G  G+PG P +
Sbjct: 496 KGHRGERGPQGPPGAPGDDGMRGEDGEIGPRGLPGE---AGPRGLLGPRGTPGIPGQPGM 552

Query: 265 CA 266
             
Sbjct: 553 AG 554



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 82/214 (38%), Gaps = 69/214 (32%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---------- 168
           G+ GEIG +G  G  G RG  G  G  G PG  G+ G +G  GPKG+MG           
Sbjct: 518 GEDGEIGPRGLPGEAGPRGLLGPRGTPGIPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQ 577

Query: 169 --PGPQ------------------------------GIPGDEGKRGPKGD---------- 186
             PGPQ                              G PG  GK G  G+          
Sbjct: 578 GNPGPQGLPGPQGPIGPPGEKGPQGKPGLGGLPGADGPPGHPGKEGQSGEKGALGPPGPQ 637

Query: 187 --------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                    G  G  G+ G  G  GE G DG PG  G  G+ G  G  G+ G  G +G  
Sbjct: 638 GPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPE 697

Query: 239 GEKGMTGPRGN---------RGKSGINGVPGTPA 263
           G KG  GP G+         +GK G+ G+PG P 
Sbjct: 698 GPKGRAGPTGDLGPPGQAGEKGKLGVPGLPGYPG 731



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 21/102 (20%)

Query: 138  EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            EKGAPG  GP GP G      + G +G +G PGP G  G  G+ G KG++G PG+ G  G
Sbjct: 972  EKGAPGEKGPQGPAG------RDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKG 1025

Query: 198  RDG---------------LPGEPGLDGIPGRNGMDGIPGKDG 224
              G                PG  G DG PG  G  G+ G+ G
Sbjct: 1026 DKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1067



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 60/145 (41%), Gaps = 45/145 (31%)

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------- 179
            G  G  G PGPQGI    GK GP G  G+PG +G+PG +G                    
Sbjct: 887  GKEGAKGDPGPQGI---SGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP 943

Query: 180  -KRGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
             +RG  G                     + G PG  G  G  G  G  G  G+PG  G  
Sbjct: 944  GERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPA 1003

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG+DG  G+ G PG  G+ G+KG
Sbjct: 1004 GSPGEDGDKGEIGEPGQKGSKGDKG 1028



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 55/148 (37%), Gaps = 54/148 (36%)

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--------------- 202
            GK G KGD   PGPQGI    GK GP G  G+PG  GL G  G P               
Sbjct: 887  GKEGAKGD---PGPQGI---SGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPV 940

Query: 203  ---------------------------------GEPGLDGIPGRNGMDGIPGKDGLPGKD 229
                                             G PG  G  G  G DG+ G  GLPG  
Sbjct: 941  GSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPA 1000

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G+ G +G+KG  G  G +G  G  G
Sbjct: 1001 GPAGSPGEDGDKGEIGEPGQKGSKGDKG 1028



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 77/184 (41%), Gaps = 51/184 (27%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------------ 163
            G+ GAKG+ G +G  G+ G  G+ G PG +G+PG +G  G K                  
Sbjct: 887  GKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGER 946

Query: 164  GDMGYPGP------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  G  GP                  +G PG++G +GP G  G  G +GL G  G  G P
Sbjct: 947  GSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSP 1006

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKD------------GIPGTNGTNGEKGMTGPRGNRGKS 253
            G DG  G  G  G  G  G  G++            G PG  G +GE    GPRG +G  
Sbjct: 1007 GEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGE---PGPRGQQGMF 1063

Query: 254  GING 257
            G  G
Sbjct: 1064 GQKG 1067



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 90/239 (37%), Gaps = 90/239 (37%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---------KGERGEK------------GAPGVVGPPGP 150
           PG  G  G  GE G+KG+ G          KG RGE+            G  G  G  GP
Sbjct: 466 PGADGGRGMPGEPGSKGDRGFDGLPGLPGDKGHRGERGPQGPPGAPGDDGMRGEDGEIGP 525

Query: 151 QGIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGY------------PG---- 191
           +G+PG+ G RG   P+G  G PG  G+ G +G  GPKG+MG             PG    
Sbjct: 526 RGLPGEAGPRGLLGPRGTPGIPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGL 585

Query: 192 --------------------RIGLDGRDGLPGEPGLDG---------------------- 209
                                 GL G DG PG PG +G                      
Sbjct: 586 PGPQGPIGPPGEKGPQGKPGLGGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGP 645

Query: 210 --IPGRNGMDGIPGKDGLPGKDGIP------GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             + G +G+ G+ G  G  G+DG P      G  G  GE G  GPRG  G  G  G  G
Sbjct: 646 RGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAG 704



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 52/111 (46%), Gaps = 15/111 (13%)

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G  G QG  G +G+ G +G  G  G +G  G  G PG  GL GIPG  G  G+PG  G 
Sbjct: 1252 AGAEGRQGEKGAKGEAGAEGPSGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQ 1311

Query: 226  PGKDGI------------PGTNGTNGEK---GMTGPRGNRGKSGINGVPGT 261
             G  G             PG+ G  G     G+ GP G +G+ G  G+PGT
Sbjct: 1312 DGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGT 1362



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 73/170 (42%), Gaps = 45/170 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERG------------EKGAPGVVGP----------- 147
            P GL+G  G++G  GA+G  G+KG  G            E+G+ G  GP           
Sbjct: 906  PAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG 965

Query: 148  ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                 G +G PG++G +GP G  G  GP G+P      GP G  G PG  G  G  G PG
Sbjct: 966  PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP------GPAGPAGSPGEDGDKGEIGEPG 1019

Query: 204  EPGLDGIPGRNGMD------------GIPGKDGLPGKDGIPGTNGTNGEK 241
            + G  G  G NG              GI G DG PG  G  G  G  G++
Sbjct: 1020 QKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDE 1069


>gi|46048885|ref|NP_990121.1| collagen alpha-1(V) chain precursor [Gallus gallus]
 gi|6759903|gb|AAF28099.1| alpha 1 (V) collagen [Gallus gallus]
          Length = 1835

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 78/148 (52%), Gaps = 15/148 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G         D G +G +G++G PGP+G  G E
Sbjct: 789 GVKGADGVRGLKGTKGEKGEDGFPGFKG---------DMGIKGDRGEIGPPGPRGEDGPE 839

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIP 232
           G +G  G  G PG +G  G  G  G PGL G PGR       G  G PG +G  G  G P
Sbjct: 840 GPKGRSGPNGDPGPLGPAGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGTRGTP 899

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G++G TGPRG RG  G  G PG
Sbjct: 900 GKPGPRGQRGPTGPRGERGPRGSTGKPG 927



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 61/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1400 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKAGPDGLRGIPGPVGEQGLPGSPGPDGP 1456

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1457 PGPLGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGPKGEQGI 1516



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 82/182 (45%), Gaps = 48/182 (26%)

Query: 113  GLQGPI---------------GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQ 151
            G+QGP+               G KGEIG  G+ G KG++GE+G PG  GP      PGP 
Sbjct: 1131 GIQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPA 1190

Query: 152  GIPGDEGKRGPKGDMGYPGP---------------QGIPGDEGKRGPKGDMGY------- 189
            G  G+ G RG +G  G  G                QG+PG  G++G  GD+G        
Sbjct: 1191 GADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPP 1250

Query: 190  -----PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                  G  G DG  G  G  G  G  G  G  G  G+ GLPG+ G+PG  G  GEKG  
Sbjct: 1251 GPRGPSGPPGADGPQGPAGGIGNPGAVGEKGEPGESGEPGLPGEVGLPGPKGERGEKGEA 1310

Query: 245  GP 246
            GP
Sbjct: 1311 GP 1312



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 12/94 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           G +GP G+ G  G  G +G  GE+G+ G PG+ G PG QG          PG  G++G +
Sbjct: 837 GPEGPKGRSGPNGDPGPLGPAGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGTR 896

Query: 164 GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIG 194
           G  G PGP+G     G  G+RGP+G  G PG  G
Sbjct: 897 GTPGKPGPRGQRGPTGPRGERGPRGSTGKPGPKG 930



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 872 PGRQGP---KGSIGFPGFPGANGEKGTRGTPGKPGPRGQRGPTGPRGERGPRGSTGKPGP 928

Query: 172 QG 173
           +G
Sbjct: 929 KG 930



 Score = 47.4 bits (111), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR-------------- 160
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG  G++              
Sbjct: 1400 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKAGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1459

Query: 161  -------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                         GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1460 LGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGPKG 1512



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 91/217 (41%), Gaps = 78/217 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------------IPGDEGKR 160
           G+ G  GA+G  G  G +G++G  G+ G PG +G                    GD+G+ 
Sbjct: 606 GRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGNRGEPGPHGPPGPPGEDGERGDDGEV 665

Query: 161 GPKGDMGYPGPQG---------------IPGDEGKRGPKGDMGY------------PG-- 191
           GP+G  G PGP+G               + G +G+ GPKG++G             PG  
Sbjct: 666 GPRGLPGEPGPRGLLGPKGPPGPPGPPGVAGMDGQTGPKGNVGPQGEPGPPGQQGNPGAQ 725

Query: 192 -------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---------------- 228
                   IG  G  G  G+PGL G+PG +G  G PGK+G PG+                
Sbjct: 726 GLPGPQGPIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGSQGPPGPQGPIGYP 785

Query: 229 --------DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                   DG+ G  GT GEKG  G  G +G  GI G
Sbjct: 786 GPRGVKGADGVRGLKGTKGEKGEDGFPGFKGDMGIKG 822



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 26/40 (65%)

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            G+ G  G PG  GLPGKDG PG  G  GE+G+ GP G+ G
Sbjct: 1029 GKEGTKGDPGPAGLPGKDGPPGLRGFPGERGLPGPIGSPG 1068


>gi|148699172|gb|EDL31119.1| procollagen, type XXVII, alpha 1, isoform CRA_d [Mus musculus]
          Length = 729

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 89/167 (53%), Gaps = 16/167 (9%)

Query: 133 KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G+EG +G  G  G 
Sbjct: 223 RGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGP 282

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKGMTGP 246
            GR G  G  GLPG     G+ GR G +G  G DG+PG+DG P   G  G +G+ G  GP
Sbjct: 283 SGRRGTQGLQGLPGP---RGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGP 339

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
            G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 340 AGRRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 379



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/132 (47%), Positives = 75/132 (56%), Gaps = 15/132 (11%)

Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKG---DMGYPGPQ 172
           GAKG MG+ G          +G KG PG  G PG QG PG EG  G KG     G+PGP 
Sbjct: 58  GAKGNMGLPGLSGNPGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPV 117

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG +G RG +GD G  G  G  G++GL GE   DG PG  G+ G+PG++G PGK G  
Sbjct: 118 GDPGPKGSRGDRGDPGPDGEHGEKGQEGLKGE---DGSPGPPGITGVPGREGKPGKQGEK 174

Query: 233 GTNGTNGEKGMT 244
           G  G  G KG+T
Sbjct: 175 GQRGAKGHKGIT 186



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 95/200 (47%), Gaps = 17/200 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G  G  G  G  G KGE G KG PG  GP G +G  G +G  GP+G +G  GP
Sbjct: 247 PGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGP 306

Query: 172 Q------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +      GIPG +G+ G +GD G  G  G  G  G  G PG+ G+PG  G  G  G+ GL
Sbjct: 307 EGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGL 366

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI 285
           PG+ G PG  GT G  G+    GN+G+ G  G PG      +   +    P      +  
Sbjct: 367 PGQLGPPGKRGTEGGTGLP---GNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGF 423

Query: 286 --------PPTIVGSEHIFS 297
                   PP ++G E I  
Sbjct: 424 KGIQGPRGPPGLMGKEGIIG 443



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 82/158 (51%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G KGE G KG+ G  G  G +G  G+ G PGP+G+ G +G  G  G  G PG
Sbjct: 258 PRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPG 317

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
             G PG +G +G  GD G  G  G  G  G+ G PG  G PG  G  G+PG+ G PGK G
Sbjct: 318 RDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRG 377

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G  G +G  G +G  G SG  G PG   +   K
Sbjct: 378 TEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPK 415



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 92/210 (43%), Gaps = 46/210 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             QGF     +   PG +G  G +G+ G  GE G KG+ G KG  G  GPPG  G+PG E
Sbjct: 109 GRQGFPGPVGD---PGPKGSRGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGRE 165

Query: 158 GKRGPKGDMGYPGPQGIPG-------------------------------------DEGK 180
           GK G +G+ G  G +G  G                                     D G 
Sbjct: 166 GKPGKQGEKGQRGAKGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGD 225

Query: 181 RGPKGDMGYPGRIGLD------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           RG  GD GYPG+ G+       G+ G PG PG  G PG  G  G  G  G PGK G  G 
Sbjct: 226 RGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGR 285

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            GT G +G+ GPRG  G+ G  G  G+  I
Sbjct: 286 RGTQGLQGLPGPRGVVGRQGPEGTAGSDGI 315



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 81/146 (55%), Gaps = 6/146 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGD---EGKRGPKGD 165
           PG QG  G  G+ G  G  G +G  G  G PG  GPPG     G+PG     GKRG +G 
Sbjct: 322 PGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGG 381

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+
Sbjct: 382 TGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGI 441

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRG 251
            G  G+ G +G  G KG  G RG+ G
Sbjct: 442 IGPPGMLGPSGLPGPKGDRGSRGDLG 467



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 89/178 (50%), Gaps = 30/178 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPKGDM 166
           G +GP G+ G+ G  G  G +G +G  G  GVVG  GP+      GIPG +G+ G +GD 
Sbjct: 269 GEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQ 328

Query: 167 ---------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                                G PG QG PG +G+ G  G +G PG+ G +G  GLP   
Sbjct: 329 GNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQ 388

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G PG
Sbjct: 389 GEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPG 446



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 75/144 (52%), Gaps = 21/144 (14%)

Query: 136 RGEKGAPGVV------GPPGPQGIPGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKGD 186
           +G+KG PG+       G  G  G+PG  G  GP   KG  G+PG  G PG++G+ GP+G 
Sbjct: 42  KGQKGDPGLSPGQAHDGAKGNMGLPGLSGNPGPLGRKGHKGHPGAAGHPGEQGQPGPEGS 101

Query: 187 ---MGYPGRIGLDGRDGLP---------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
               GYPGR G  G  G P         G+PG DG  G  G +G+ G+DG PG  GI G 
Sbjct: 102 PGAKGYPGRQGFPGPVGDPGPKGSRGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGV 161

Query: 235 NGTNGEKGMTGPRGNRGKSGINGV 258
            G  G+ G  G +G RG  G  G+
Sbjct: 162 PGREGKPGKQGEKGQRGAKGHKGI 185



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 18/99 (18%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
           +  PPG +G  G  G  G +GE G KG+    GE G PGV G  GP+G PGD      +G
Sbjct: 369 QLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQG 428

Query: 159 KRGPKGDMGYP---------GPQGIPGDEGKRGPKGDMG 188
            RGP G MG           GP G+PG +G RG +GD+G
Sbjct: 429 PRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDLG 467



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 3/59 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGY 168
           GL GP G  G+IG KG  G +G  G  G  G++GPPG   P G+PG +G RG +GD+G 
Sbjct: 410 GLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDLGL 468


>gi|18203571|sp|Q9WUB9.1|MARCO_MESAU RecName: Full=Macrophage receptor MARCO; AltName: Full=Macrophage
           receptor with collagenous structure
 gi|4416459|gb|AAD20360.1| macrophage receptor MARCO [Mesocricetus auratus]
          Length = 483

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 91/179 (50%), Gaps = 30/179 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV------------KGERGEKGAPGVVGPPGPQGIPGDEGK 159
           PGLQGP G KGE G +G MG             +GE+G KG  G++GP G  G  GD+G 
Sbjct: 157 PGLQGPPGIKGEAGLQGPMGAPREPGATGAPGPQGEKGSKGDKGLIGPKGEHGTKGDKGD 216

Query: 160 R---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGR 213
               G KGDMG  G  G+ G  G +G KGD G PG  GL G  G+    G+PGL G+PG 
Sbjct: 217 LGLPGSKGDMGMKGVTGVMGPPGAQGNKGDPGKPGLPGLAGSPGVKGDQGQPGLQGVPGT 276

Query: 214 NGMDGIPGKDGLPGK------------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G PG              G PG  G  G KG TG +G +G  G +GVPG
Sbjct: 277 PGAAGPSGAKGEPGHPGPPGPTGPQGISGSPGAAGLKGSKGDTGIQGQKGTKGESGVPG 335



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 120/278 (43%), Gaps = 76/278 (27%)

Query: 52  VPQTPHVEFVPPDLYEEIREREK--EQQNSTHNNPWVWLNAYSR----IPLV-------- 97
           VP+TP ++ +   L +    +E+  +Q ++   NP ++     R    IP +        
Sbjct: 108 VPRTPGLQALQVQLTQVRTSQEQLLQQVDNLTRNPELFRIKGERGSPGIPGLQGPPGIKG 167

Query: 98  --AMQGFCNSTKEYCPPGLQGPIGQKGE------IGAKGEMGVKGERGEKGAP------- 142
              +QG   + +E    G  GP G+KG       IG KGE G KG++G+ G P       
Sbjct: 168 EAGLQGPMGAPREPGATGAPGPQGEKGSKGDKGLIGPKGEHGTKGDKGDLGLPGSKGDMG 227

Query: 143 -----GVVGPPGPQ---------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP----- 183
                GV+GPPG Q         G+PG  G  G KGD G PG QG+PG  G  GP     
Sbjct: 228 MKGVTGVMGPPGAQGNKGDPGKPGLPGLAGSPGVKGDQGQPGLQGVPGTPGAAGPSGAKG 287

Query: 184 ----------------------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
                                       KGD G  G+ G  G  G+PG  G  G  G  G
Sbjct: 288 EPGHPGPPGPTGPQGISGSPGAAGLKGSKGDTGIQGQKGTKGESGVPGLAGRKGDTGNPG 347

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           + G  G+ G PG  G PG  G++G++G  G +G +G+S
Sbjct: 348 LAGPKGEPGRPGLKGDPGMKGSSGQQGQKGEKGEKGQS 385



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIP---GTNGTNGEKGMTGPRG 248
           + G  G PG PGL G PG  G  G+ G  G    PG  G P   G  G+ G+KG+ GP+G
Sbjct: 147 IKGERGSPGIPGLQGPPGIKGEAGLQGPMGAPREPGATGAPGPQGEKGSKGDKGLIGPKG 206

Query: 249 NRGKSGINGVPGTPA 263
             G  G  G  G P 
Sbjct: 207 EHGTKGDKGDLGLPG 221


>gi|37589348|gb|AAH59289.1| LOC398739 protein [Xenopus laevis]
          Length = 1191

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/160 (43%), Positives = 81/160 (50%), Gaps = 15/160 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G +G +G  G  GVKG  G +G  G  G  G  G PG +G  G KGD G  GP 
Sbjct: 795 GTQGPAGPQGPLGYPGSRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPS 854

Query: 173 GIPGDEGKRGPKGDMG------------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G++G  GPKG  G              G++G+ G   LPG PG  G  G  G  G P
Sbjct: 855 GPRGEDGPEGPKGRGGPSGELGPLGPGGEKGKLGVPG---LPGYPGRQGPKGSIGFPGFP 911

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G +G  G  G PG  G  G++G TGPRG RG  G  G PG
Sbjct: 912 GANGEKGTRGTPGKPGPRGQRGPTGPRGERGPRGATGKPG 951



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 78/160 (48%), Gaps = 24/160 (15%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +G  G +G +G  GE+G  G PG+ G PG  G PG  GK GP G+ G  GP       
Sbjct: 747 GAQGLPGPQGAIGPPGEKGPFGKPGLPGMPGADGPPGHPGKEGPSGEKGTQGPA------ 800

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
              GP+G +GYPG  G+ G DG+ G  G  G  G +G  G  G  G+ G  G  G +G  
Sbjct: 801 ---GPQGPLGYPGSRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPSGPR 857

Query: 239 GEKGMTGPRGN---------------RGKSGINGVPGTPA 263
           GE G  GP+G                +GK G+ G+PG P 
Sbjct: 858 GEDGPEGPKGRGGPSGELGPLGPGGEKGKLGVPGLPGYPG 897



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 83/182 (45%), Gaps = 30/182 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGD 165
           PG QG  G +G IG  GE G  G+ G  G PG  GPPG      P G  G +G  GP+G 
Sbjct: 746 PGAQGLPGPQGAIGPPGEKGPFGKPGLPGMPGADGPPGHPGKEGPSGEKGTQGPAGPQGP 805

Query: 166 MGYPGPQGIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGI 210
           +GYPG +G+ G +G RG KG               DMG  G  G  G  G  GE G +G 
Sbjct: 806 LGYPGSRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPSGPRGEDGPEGP 865

Query: 211 PGRNG---------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            GR G           G  GK G+PG  G PG  G  G  G  G  G  G+ G  G PG 
Sbjct: 866 KGRGGPSGELGPLGPGGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGTRGTPGK 925

Query: 262 PA 263
           P 
Sbjct: 926 PG 927



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 105/272 (38%), Gaps = 90/272 (33%)

Query: 77  QNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER 136
           Q S   +    +   +R+ L    G    T    P G  GP G KGE    G++G +G R
Sbjct: 558 QVSAQESQAQAILQQARLALRGPSGPMGLTGRPGPMGSPGPSGLKGE---SGDLGPQGPR 614

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRG------PKGDMGYPGPQGIPGDEGKR--------- 181
           G +G+PG VG PG +G  G +G RG      PKGD G+ G  G+PG++G R         
Sbjct: 615 GSQGSPGPVGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGESGPHGPP 674

Query: 182 ---------------GPKGDMGYPGRIGL------------------------------- 195
                          GP+G  G PG  GL                               
Sbjct: 675 GPPGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPQGPPGSTGVPGMDGQVGPKGSVGPQ 734

Query: 196 -----------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEK 241
                       G  GLPG  G  G PG  G  G PG  G+PG DG    PG  G +GEK
Sbjct: 735 GEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPFGKPGLPGMPGADGPPGHPGKEGPSGEK 794

Query: 242 GMTGP------------RGNRGKSGINGVPGT 261
           G  GP            RG +G  GI G+ GT
Sbjct: 795 GTQGPAGPQGPLGYPGSRGVKGADGIRGLKGT 826



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 80/149 (53%), Gaps = 3/149 (2%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G +G KG +G +GE G  G++G  GA G+ GP G  G PG++G  G  G  G PG 
Sbjct: 719 PGMDGQVGPKGSVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPFGKPGLPGMPGA 778

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGK 228
            G PG  GK GP G+ G  G  G  G  G PG  G+   DGI G  G  G  G+DG PG 
Sbjct: 779 DGPPGHPGKEGPSGEKGTQGPAGPQGPLGYPGSRGVKGADGIRGLKGTKGEKGEDGFPGF 838

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G  GE G +GPRG  G  G  G
Sbjct: 839 KGDMGIKGDRGEIGPSGPRGEDGPEGPKG 867



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 91/220 (41%), Gaps = 60/220 (27%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER--------------------- 136
             +G   S      PG  GP G +G  G  G  G KG R                     
Sbjct: 627 GRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGESGPHGPPGPPGEDGERGDD 686

Query: 137 GEKGAPGVVGPPGPQG---------------IPGDEGKRGPKGDMGY------------P 169
           G+ G  G+ G PGP+G               +PG +G+ GPKG +G             P
Sbjct: 687 GDVGPRGLPGEPGPRGLLGPKGPQGPPGSTGVPGMDGQVGPKGSVGPQGEPGPPGQQGNP 746

Query: 170 GPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD--------- 217
           G QG+PG +G  GP   KG  G PG  G+ G DG PG PG +G  G  G           
Sbjct: 747 GAQGLPGPQGAIGPPGEKGPFGKPGLPGMPGADGPPGHPGKEGPSGEKGTQGPAGPQGPL 806

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G PG  G+ G DGI G  GT GEKG  G  G +G  GI G
Sbjct: 807 GYPGSRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKG 846



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 98/256 (38%), Gaps = 78/256 (30%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IP 154
           G    + +  P G +G  G  G +G  G  G  G  G +G PG  GP G +G      +P
Sbjct: 600 GLKGESGDLGPQGPRGSQGSPGPVGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLP 659

Query: 155 GDEGKR------------------------GPKGDMGYPGPQGI---------------- 174
           G++G R                        GP+G  G PGP+G+                
Sbjct: 660 GEKGHRGESGPHGPPGPPGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPQGPPGSTGVP 719

Query: 175 --------------------------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                                     PG +G  GP+G +G PG  G  G+ GLPG PG D
Sbjct: 720 GMDGQVGPKGSVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPFGKPGLPGMPGAD 779

Query: 209 GIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           G PG  G +G  G+ G  G        G PG+ G  G  G+ G +G +G+ G +G PG  
Sbjct: 780 GPPGHPGKEGPSGEKGTQGPAGPQGPLGYPGSRGVKGADGIRGLKGTKGEKGEDGFPGFK 839

Query: 263 AICAYKRESCSLLPNS 278
                K +   + P+ 
Sbjct: 840 GDMGIKGDRGEIGPSG 855



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 84/204 (41%), Gaps = 57/204 (27%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYPG 170
           L+GP G  G  G  G MG  G  G KG  G +GP GP   QG PG  GK G +G  G  G
Sbjct: 577 LRGPSGPMGLTGRPGPMGSPGPSGLKGESGDLGPQGPRGSQGSPGPVGKPGRRGRAGSDG 636

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRD------------------------------G 200
            +G+PG   + GPKGD G+ G  GL G                                G
Sbjct: 637 ARGMPG---QTGPKGDRGFDGLAGLPGEKGHRGESGPHGPPGPPGEDGERGDDGDVGPRG 693

Query: 201 LPGEPGLDGI------PGRNGMDGIPGKDGLPGKDGI---------------PGTNGTNG 239
           LPGEPG  G+       G  G  G+PG DG  G  G                PG  G  G
Sbjct: 694 LPGEPGPRGLLGPKGPQGPPGSTGVPGMDGQVGPKGSVGPQGEPGPPGQQGNPGAQGLPG 753

Query: 240 EKGMTGPRGNRGKSGINGVPGTPA 263
            +G  GP G +G  G  G+PG P 
Sbjct: 754 PQGAIGPPGEKGPFGKPGLPGMPG 777



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 63/148 (42%), Gaps = 42/148 (28%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGK---------------------------------- 180
           GD G+RGP G  G PG  G+PG  G                                   
Sbjct: 513 GDPGERGPPGRAGLPGADGLPGPPGTMLMLPFRFSGGGDGGSKGPQVSAQESQAQAILQQ 572

Query: 181 -----RGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                RGP G MG    PG +G  G  GL GE G  G  G  G  G PG  G PG+ G  
Sbjct: 573 ARLALRGPSGPMGLTGRPGPMGSPGPSGLKGESGDLGPQGPRGSQGSPGPVGKPGRRGRA 632

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G++G  G  G TGP+G+RG  G+ G+PG
Sbjct: 633 GSDGARGMPGQTGPKGDRGFDGLAGLPG 660



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 64/133 (48%), Gaps = 36/133 (27%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------- 152
           GL+G  G+KGE    G KG+MG+KG+RGE G  G  G  GP+G                 
Sbjct: 822 GLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPSGPRGEDGPEGPKGRGGPSGELGPLGPG 881

Query: 153 ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIGLD 196
                     +PG  G++GPKG +G+PG  G  G++G RG      P+G  G  G  G  
Sbjct: 882 GEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGTRGTPGKPGPRGQRGPTGPRGER 941

Query: 197 GRDGLPGEPGLDG 209
           G  G  G+PG  G
Sbjct: 942 GPRGATGKPGPKG 954



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 896 PGRQGP---KGSIGFPGFPGANGEKGTRGTPGKPGPRGQRGPTGPRGERGPRGATGKPGP 952

Query: 172 QG 173
           +G
Sbjct: 953 KG 954



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 27/42 (64%)

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            + G+ G  G PG  GLPGKDG PG  G  GE+G+ GP G+ G
Sbjct: 1051 VAGKEGSKGDPGPAGLPGKDGPPGLRGFTGERGLPGPIGSPG 1092


>gi|91083001|ref|XP_974458.1| PREDICTED: similar to collagen alpha-2(IV) chain [Tribolium
            castaneum]
          Length = 1847

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 81/186 (43%), Positives = 93/186 (50%), Gaps = 41/186 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++G  G  G  G  G  G+ GERG+ G PG+ GPPGPQG+    G RGPKG  G  GPQ
Sbjct: 986  GIEGLPGHHGRAGLSGVQGLPGERGDIGLPGLRGPPGPQGL---LGPRGPKGLEGDRGPQ 1042

Query: 173  GIPGD---EGKRGPKGDMGYPGRIGLDGRD------------GLPGEPGLD--------- 208
            G PG+    G+ GP+GD GYPG  G  G              GL GEPG D         
Sbjct: 1043 GFPGEMGIPGESGPRGDSGYPGIKGPKGESAISGPKGEYGEPGLIGEPGFDGEPGLPGPP 1102

Query: 209  -----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                       G PG  G  GIP   G PG+DG  G  G  GE G+ G RG  G+SGI G
Sbjct: 1103 GLPGDRGLDIYGPPGPKGNLGIP---GFPGRDGEVGLKGERGEGGIDGLRGAPGESGIRG 1159

Query: 258  VPGTPA 263
             PGTP 
Sbjct: 1160 APGTPG 1165



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 104/218 (47%), Gaps = 31/218 (14%)

Query: 86  VWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV 145
           V L+ +   P   ++G        C PGL G   QKGE G  G  G  G  G +G PG  
Sbjct: 560 VGLHGFDGFP--GLKGRKGDDCGVCLPGLPG---QKGEAGEYGRNGRPGTIGYQGLPGPR 614

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG--------------PKGDM---G 188
           GP GPQG  G EG+RG +G  G PG QG PG +G RG               KG+M   G
Sbjct: 615 GPRGPQGKEGKEGERGLEGTPGTPGLQGAPGTKGARGLLIFPDPSTKEAEAEKGEMGERG 674

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG------ 242
           +PG +G DG  G  G PG  G+PG  G  G  G  GLPG DG+PG NG  G+KG      
Sbjct: 675 FPGLMGGDGEFGPRGLPGDAGVPGFKGESGEIGTPGLPGLDGVPGINGIPGQKGEPHDIP 734

Query: 243 ---MTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
              + G  G  G  GI GV G   +     +S S + N
Sbjct: 735 KEYLRGDYGLTGVPGIKGVKGDKGMMGLPGDSVSNIAN 772



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 88/163 (53%), Gaps = 25/163 (15%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            Y PPG +G +G  G  G  GE+G+KGERGE G  G+ G PG  GI         +G  G 
Sbjct: 1113 YGPPGPKGNLGIPGFPGRDGEVGLKGERGEGGIDGLRGAPGESGI---------RGAPGT 1163

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG  G+ G +G+RG  G  G+PG +         GEPG++G PGR G  G+PG  G PG 
Sbjct: 1164 PGWNGLNGTKGERGDYGSPGFPGNV---------GEPGMEGEPGRMGRPGMPGDIGFPGI 1214

Query: 229  DGIPGTNGTNGEKGMT-------GPRGNRGKSGINGVPGTPAI 264
             G  G+ G  G +G+        G +G+ G++G +G+PG   I
Sbjct: 1215 SGPQGSVGPKGNQGLPGLAPFGFGEKGDLGETGFHGLPGNKGI 1257



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 88/180 (48%), Gaps = 13/180 (7%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQ 151
           +P  ++    N T +   PG+QG  G  G  G  G  G  G+ G  G PG    GPPG  
Sbjct: 762 LPGDSVSNIANVTGDIGYPGIQGERGPPGRTGRNGAPGPMGKEGLPGVPGSSPTGPPGEP 821

Query: 152 G------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G      IPGD G RG  G  G PG  G PG  G +G +GD G   RI L+G  G  G P
Sbjct: 822 GVRGYPGIPGDAGPRGLPGMPGMPGLDGYPGTPGNKGERGDPGL--RI-LNGEMGPQGPP 878

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI--NGVPGTPA 263
           G+ G PG  G DG PG  G+PG  G+ G  G  G  G+ G  G +G  GI   G PG P 
Sbjct: 879 GIKGEPGDFGPDGYPGIPGIPGVKGVRGPKGAPGFAGLPGAPGAKGMQGIMRPGFPGQPG 938



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 93/212 (43%), Gaps = 49/212 (23%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------ 151
              G      E+ P GL G  G  G  G  GE+G  G  G  G PG+ G PG +      
Sbjct: 674 GFPGLMGGDGEFGPRGLPGDAGVPGFKGESGEIGTPGLPGLDGVPGINGIPGQKGEPHDI 733

Query: 152 ------------GIPGDEGKRGPKGDMGYPGPQ-----------GIPGDEGKRGPKGDMG 188
                       G+PG +G +G KG MG PG             G PG +G+RGP G  G
Sbjct: 734 PKEYLRGDYGLTGVPGIKGVKGDKGMMGLPGDSVSNIANVTGDIGYPGIQGERGPPGRTG 793

Query: 189 YPGRIGLDGRDGLPGEP--------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
             G  G  G++GLPG P              G  GIPG  G  G+PG  G+PG DG PGT
Sbjct: 794 RNGAPGPMGKEGLPGVPGSSPTGPPGEPGVRGYPGIPGDAGPRGLPGMPGMPGLDGYPGT 853

Query: 235 NGTNGEKG------MTGPRGNRGKSGINGVPG 260
            G  GE+G      + G  G +G  GI G PG
Sbjct: 854 PGNKGERGDPGLRILNGEMGPQGPPGIKGEPG 885



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 79/163 (48%), Gaps = 13/163 (7%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G +GE G  G  G  GAPG +G  G  G+PG      P G  G PG +G PG  G  GP+
Sbjct: 781 GIQGERGPPGRTGRNGAPGPMGKEGLPGVPGSS----PTGPPGEPGVRGYPGIPGDAGPR 836

Query: 185 GDMGYPGRIGLDGRDGLPG------EPGLDGIPGRNGMDGIPGKDGLPG---KDGIPGTN 235
           G  G PG  GLDG  G PG      +PGL  + G  G  G PG  G PG    DG PG  
Sbjct: 837 GLPGMPGMPGLDGYPGTPGNKGERGDPGLRILNGEMGPQGPPGIKGEPGDFGPDGYPGIP 896

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
           G  G KG+ GP+G  G +G+ G PG   +    R      P S
Sbjct: 897 GIPGVKGVRGPKGAPGFAGLPGAPGAKGMQGIMRPGFPGQPGS 939



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 90/188 (47%), Gaps = 28/188 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G      +Y  PG  G +G+ G  G  G MG  G  G+ G PG+ GP G  G  G++
Sbjct: 1168 GLNGTKGERGDYGSPGFPGNVGEPGMEGEPGRMGRPGMPGDIGFPGISGPQGSVGPKGNQ 1227

Query: 158  G-------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G         G KGD+G  G  G+PG++G RG   D G+ G  GL G  G  G+PGL G 
Sbjct: 1228 GLPGLAPFGFGEKGDLGETGFHGLPGNKGIRG---DDGFYGPPGLKGPTGDSGQPGLQGE 1284

Query: 211  PGRNGMDGI------------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            PG  G+ G                   PG+ G PG DG+PG  G  G+KG  G  G  G 
Sbjct: 1285 PGYPGIKGTFGDSGEPGPPGLPGRNPQPGEPGRPGFDGLPGRAGRPGQKGAPGEYGPDGP 1344

Query: 253  SGINGVPG 260
             GI+G PG
Sbjct: 1345 PGISGTPG 1352



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 81/154 (52%), Gaps = 12/154 (7%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
             G+KG++G  G  G+ G +G +G  G  GPPG +G  GD G+ G +G+ GYPG +G  GD
Sbjct: 1237 FGEKGDLGETGFHGLPGNKGIRGDDGFYGPPGLKGPTGDSGQPGLQGEPGYPGIKGTFGD 1296

Query: 178  E--------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG-- 227
                       R P+   G PGR G DG  G  G PG  G PG  G DG PG  G PG  
Sbjct: 1297 SGEPGPPGLPGRNPQ--PGEPGRPGFDGLPGRAGRPGQKGAPGEYGPDGPPGISGTPGFS 1354

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             DG  G  G +G  G+ G  G  G+ GI G+PG 
Sbjct: 1355 MDGEKGDIGDSGYPGLPGSPGLEGRPGIPGIPGV 1388



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 90/211 (42%), Gaps = 64/211 (30%)

Query: 111  PPGLQGPI-----GQKGEIGAKGEMGVKGERGEKGAPGVV-------------------- 145
            PPG+ G       G+KG+IG  G  G+ G  G +G PG+                     
Sbjct: 1344 PPGISGTPGFSMDGEKGDIGDSGYPGLPGSPGLEGRPGIPGIPGVTGLKGPPGDYGFSAI 1403

Query: 146  ------GPPGPQGIPGDEGKRGPKGDM------------------------GYPGPQGIP 175
                  G PG +G PG  G +G +GD                         GYPG  G+ 
Sbjct: 1404 TFKGERGEPGYRGAPGLNGTKGERGDFGVTGPPGPPGEEGLPGFPGDVGPPGYPGASGVK 1463

Query: 176  GDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G +G R         GP GD G PG  GL G  GLPGEPG  G+ GR GM G  G DGLP
Sbjct: 1464 GPKGDRGDWSINALPGPLGDAGLPGFDGLPGFQGLPGEPGFPGLIGRKGMRGDAGIDGLP 1523

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G +G  G  G  G  G+ G +G RG  G+ G
Sbjct: 1524 GFEGPKGMAGLPGLAGLPGLQGARGAPGVRG 1554



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 78/152 (51%), Gaps = 33/152 (21%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGA------------------PGVVGPPGPQGIPGDEGKR 160
            G++GE G +G  G+ G +GE+G                   PG VGPPG    PG  G +
Sbjct: 1407 GERGEPGYRGAPGLNGTKGERGDFGVTGPPGPPGEEGLPGFPGDVGPPG---YPGASGVK 1463

Query: 161  GPKGDMG------YPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            GPKGD G       PGP    G+PG +G  G +G  G PG  GL GR G+ G+ G+DG+P
Sbjct: 1464 GPKGDRGDWSINALPGPLGDAGLPGFDGLPGFQGLPGEPGFPGLIGRKGMRGDAGIDGLP 1523

Query: 212  G---RNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            G     GM G+PG  GLPG  G  G  G  GE
Sbjct: 1524 GFEGPKGMAGLPGLAGLPGLQGARGAPGVRGE 1555



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 89/200 (44%), Gaps = 40/200 (20%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVGPPGPQGI 153
            Y PPGL+GP G  G+ G +GE G  G +G  G                PG  G PG  G+
Sbjct: 1264 YGPPGLKGPTGDSGQPGLQGEPGYPGIKGTFGDSGEPGPPGLPGRNPQPGEPGRPGFDGL 1323

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRG-----PKGDMGYPGRIGLDGRDGLPGEPGLD 208
            PG  G+ G KG  G  GP G PG  G  G      KGD+G  G  GL G  GL G PG+ 
Sbjct: 1324 PGRAGRPGQKGAPGEYGPDGPPGISGTPGFSMDGEKGDIGDSGYPGLPGSPGLEGRPGIP 1383

Query: 209  GIPGRNGMDGIPG-----------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS---- 253
            GIPG  G+ G PG           + G PG  G PG NGT GE+G  G  G  G      
Sbjct: 1384 GIPGVTGLKGPPGDYGFSAITFKGERGEPGYRGAPGLNGTKGERGDFGVTGPPGPPGEEG 1443

Query: 254  -----GINGVPGTPAICAYK 268
                 G  G PG P     K
Sbjct: 1444 LPGFPGDVGPPGYPGASGVK 1463



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 79/183 (43%), Gaps = 56/183 (30%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +G+ G  G  G KG  G+KG  G  GPPG QG PG  G  G KGD G PG +G PG +
Sbjct: 316 GYQGDKGFPGFPGPKGRAGDKGEQGDDGPPGKQGRPGPFGPSGEKGDKGAPGYEGTPGFD 375

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPG------------------------EPGLDGIPGR- 213
           G+ GP+G+ G  G  G+ GR G PG                        E G+ GIPGR 
Sbjct: 376 GETGPRGEDGNRGTPGVQGRSGPPGKYDPFLDEIFEGSPGIQGPEGPVGERGMSGIPGRP 435

Query: 214 -------------------------------NGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                                           G DG+PG+ G  G  G+PG  G  GEKG
Sbjct: 436 GLSGPIGPPGPPGPPGIPGLAGPKGLTIKGERGTDGLPGRPGNTGPPGLPGAMGILGEKG 495

Query: 243 MTG 245
            TG
Sbjct: 496 FTG 498



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 81/158 (51%), Gaps = 22/158 (13%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP---GPQGIP 175
           GQ GE G+ GE G +G+ GE+G PGV      +G PG +G+ GP G  G     G  G  
Sbjct: 117 GQGGEYGSPGERGSRGDDGERGLPGV------EGRPGYQGEAGPMGPPGLDGCNGTDGAQ 170

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP-----------GRNGMDGIPGKDG 224
           G +G RG +G  G PG  GL G  G PGE G + I            G  G+DG  G  G
Sbjct: 171 GAQGARGLQGIRGLPGPQGLQGFRGEPGEGGGNSIGTKGDRGDGAYDGPPGLDGFRGPTG 230

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKS--GINGVPG 260
            PG+ G PG  G  GE+G  GP G+ G S  G+ G PG
Sbjct: 231 PPGRIGEPGYEGIVGEQGFWGPPGDIGDSIKGLKGQPG 268



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 104/249 (41%), Gaps = 96/249 (38%)

Query: 112  PGLQGPIGQKGEIG---------AKGEMGV---------------KGERGEKGAPGV--- 144
            PG  G +G KGE G         A GE G+               KGERG+ G+PG    
Sbjct: 1128 PGRDGEVGLKGERGEGGIDGLRGAPGESGIRGAPGTPGWNGLNGTKGERGDYGSPGFPGN 1187

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYP---GPQ----------------------------- 172
            VG PG +G PG  G+ G  GD+G+P   GPQ                             
Sbjct: 1188 VGEPGMEGEPGRMGRPGMPGDIGFPGISGPQGSVGPKGNQGLPGLAPFGFGEKGDLGETG 1247

Query: 173  --GIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGI----------------- 210
              G+PG++G RG  G  G P   G  G  G+ GL GEPG  GI                 
Sbjct: 1248 FHGLPGNKGIRGDDGFYGPPGLKGPTGDSGQPGLQGEPGYPGIKGTFGDSGEPGPPGLPG 1307

Query: 211  -------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG--------MTGPRGNRGKSGI 255
                   PGR G DG+PG+ G PG+ G PG  G +G  G        M G +G+ G SG 
Sbjct: 1308 RNPQPGEPGRPGFDGLPGRAGRPGQKGAPGEYGPDGPPGISGTPGFSMDGEKGDIGDSGY 1367

Query: 256  NGVPGTPAI 264
             G+PG+P +
Sbjct: 1368 PGLPGSPGL 1376



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 82/179 (45%), Gaps = 35/179 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV--KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG-- 167
            PG+ G  G KG  G  G   +  KGERGE         PG +G PG  G +G +GD G  
Sbjct: 1383 PGIPGVTGLKGPPGDYGFSAITFKGERGE---------PGYRGAPGLNGTKGERGDFGVT 1433

Query: 168  -------------YPG---PQGIPGDEGKRGPKGDMG------YPGRIGLDGRDGLPGEP 205
                         +PG   P G PG  G +GPKGD G       PG +G  G  G  G P
Sbjct: 1434 GPPGPPGEEGLPGFPGDVGPPGYPGASGVKGPKGDRGDWSINALPGPLGDAGLPGFDGLP 1493

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+PG  G  G+ G+ G+ G  GI G  G  G KGM G  G  G  G+ G  G P +
Sbjct: 1494 GFQGLPGEPGFPGLIGRKGMRGDAGIDGLPGFEGPKGMAGLPGLAGLPGLQGARGAPGV 1552



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 87/188 (46%), Gaps = 32/188 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA-----PGVVGPPGPQGIPGDEGKRGP---- 162
            PG+ G  G +G  GA G  G+ G  G KG      PG  G PG  G+PG  G+ G     
Sbjct: 896  PGIPGVKGVRGPKGAPGFAGLPGAPGAKGMQGIMRPGFPGQPGSLGLPGTPGRYGDTGQK 955

Query: 163  --------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---- 204
                          KG+ G  G +G PGDEG    +G  G+ GR GL G  GLPGE    
Sbjct: 956  GEPGFPGGPGYDGMKGEPGLWGLRGQPGDEGI---EGLPGHHGRAGLSGVQGLPGERGDI 1012

Query: 205  --PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
              PGL G PG  G+ G  G  GL G  G  G  G  G  G +GPRG+ G  GI G  G  
Sbjct: 1013 GLPGLRGPPGPQGLLGPRGPKGLEGDRGPQGFPGEMGIPGESGPRGDSGYPGIKGPKGES 1072

Query: 263  AICAYKRE 270
            AI   K E
Sbjct: 1073 AISGPKGE 1080



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 83/182 (45%), Gaps = 32/182 (17%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E+ P G  G  G  G  G  G  G+KG +G+     + G PG +G  G+ G+ G  G +G
Sbjct: 547 EFGPRGFPGSPGDVGLHGFDGFPGLKGRKGDDCGVCLPGLPGQKGEAGEYGRNGRPGTIG 606

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------------------------- 202
           Y   QG+PG  G RGP+G  G  G  GL+G  G P                         
Sbjct: 607 Y---QGLPGPRGPRGPQGKEGKEGERGLEGTPGTPGLQGAPGTKGARGLLIFPDPSTKEA 663

Query: 203 ----GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
               GE G  G PG  G DG  G  GLPG  G+PG  G +GE G  G  G  G  GING+
Sbjct: 664 EAEKGEMGERGFPGLMGGDGEFGPRGLPGDAGVPGFKGESGEIGTPGLPGLDGVPGINGI 723

Query: 259 PG 260
           PG
Sbjct: 724 PG 725



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 79/164 (48%), Gaps = 25/164 (15%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQ 151
            G    T +   PGLQG  G  G  G  G+ G  G         + GE G PG  G PG  
Sbjct: 1268 GLKGPTGDSGQPGLQGEPGYPGIKGTFGDSGEPGPPGLPGRNPQPGEPGRPGFDGLPGRA 1327

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPG--DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            G PG +G  G  G  G PG  G PG   +G++G  GD GYP   GL G  GL G PG+ G
Sbjct: 1328 GRPGQKGAPGEYGPDGPPGISGTPGFSMDGEKGDIGDSGYP---GLPGSPGLEGRPGIPG 1384

Query: 210  IPGRNGMDGIP-----------GKDGLPGKDGIPGTNGTNGEKG 242
            IPG  G+ G P           G+ G PG  G PG NGT GE+G
Sbjct: 1385 IPGVTGLKGPPGDYGFSAITFKGERGEPGYRGAPGLNGTKGERG 1428



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 86/189 (45%), Gaps = 39/189 (20%)

Query: 125 GAKGEMGVKGERGEKGAPGVV----GPPG---PQGIPGDEGKRGPKGDMGYPGPQG---- 173
           G++GE G  G+ G KG PGV     GPPG   P+G PG  G  G  G  G+PG +G    
Sbjct: 518 GSRGERGGAGDVGPKGYPGVGVPIRGPPGEFGPRGFPGSPGDVGLHGFDGFPGLKGRKGD 577

Query: 174 -----IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIPGKDGL 225
                +PG  G++G  G+ G  GR G  G  GLPG  G  G  G+ G +   G+ G  G 
Sbjct: 578 DCGVCLPGLPGQKGEAGEYGRNGRPGTIGYQGLPGPRGPRGPQGKEGKEGERGLEGTPGT 637

Query: 226 PGKDGIPGTNGTN--------------------GEKGMTGPRGNRGKSGINGVPGTPAIC 265
           PG  G PGT G                      GE+G  G  G  G+ G  G+PG   + 
Sbjct: 638 PGLQGAPGTKGARGLLIFPDPSTKEAEAEKGEMGERGFPGLMGGDGEFGPRGLPGDAGVP 697

Query: 266 AYKRESCSL 274
            +K ES  +
Sbjct: 698 GFKGESGEI 706



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 87/171 (50%), Gaps = 20/171 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG-----APGVVGPPGPQGIPGDEGKRGPKGDM- 166
           GL G  G  G  G  G MG+ GE+G  G      PG  G PG  G  G  G+RG  GD+ 
Sbjct: 471 GLPGRPGNTGPPGLPGAMGILGEKGFTGQTVIGPPGEPGYPGIPGFKGSRGERGGAGDVG 530

Query: 167 --GYPGPQGIP--GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------LDGIPGR 213
             GYPG  G+P  G  G+ GP+G  G PG +GL G DG PG  G         L G+PG+
Sbjct: 531 PKGYPG-VGVPIRGPPGEFGPRGFPGSPGDVGLHGFDGFPGLKGRKGDDCGVCLPGLPGQ 589

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G++G PG  G  G  G  G +G  G  G  G+ G+ G PGTP +
Sbjct: 590 KGEAGEYGRNGRPGTIGYQGLPGPRGPRGPQGKEGKEGERGLEGTPGTPGL 640



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/122 (45%), Positives = 65/122 (53%), Gaps = 15/122 (12%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP-- 190
           +G +G+KG PG    PGP+G  GD+G+   +GD G PG QG PG  G  G KGD G P  
Sbjct: 315 RGYQGDKGFPGF---PGPKGRAGDKGE---QGDDGPPGKQGRPGPFGPSGEKGDKGAPGY 368

Query: 191 -GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGM 243
            G  G DG  G  GE G  G PG  G  G PGK      +   G  GI G  G  GE+GM
Sbjct: 369 EGTPGFDGETGPRGEDGNRGTPGVQGRSGPPGKYDPFLDEIFEGSPGIQGPEGPVGERGM 428

Query: 244 TG 245
           +G
Sbjct: 429 SG 430



 Score = 46.2 bits (108), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 80/183 (43%), Gaps = 42/183 (22%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD-----EGKRGPKGDMGYPGPQG 173
            G+ G  G  G  G  G  G+KGAPG  GP GP GI G      +G++G  GD GYPG  G
Sbjct: 1313 GEPGRPGFDGLPGRAGRPGQKGAPGEYGPDGPPGISGTPGFSMDGEKGDIGDSGYPGLPG 1372

Query: 174  IPGDEGK------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG--- 218
             PG EG+            +GP GD G+   I   G  G PG  G  G+ G  G  G   
Sbjct: 1373 SPGLEGRPGIPGIPGVTGLKGPPGDYGFS-AITFKGERGEPGYRGAPGLNGTKGERGDFG 1431

Query: 219  ---------------IPGKDGLPGKDGIPGTNGTNGEKG------MTGPRGNRGKSGING 257
                            PG  G PG  G  G  G  G++G      + GP G+ G  G +G
Sbjct: 1432 VTGPPGPPGEEGLPGFPGDVGPPGYPGASGVKGPKGDRGDWSINALPGPLGDAGLPGFDG 1491

Query: 258  VPG 260
            +PG
Sbjct: 1492 LPG 1494



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 92/217 (42%), Gaps = 67/217 (30%)

Query: 111 PPGLQGPIGQKGE-----IGAKGEMG---------VKGERGEKGAPGVVGPPGPQGIPGD 156
           P GLQG  G+ GE     IG KG+ G         + G RG  G PG +G PG +GI G+
Sbjct: 187 PQGLQGFRGEPGEGGGNSIGTKGDRGDGAYDGPPGLDGFRGPTGPPGRIGEPGYEGIVGE 246

Query: 157 EGKRGPKGDMG--YPGPQGIPGDEG----------------------------------- 179
           +G  GP GD+G    G +G PGD G                                   
Sbjct: 247 QGFWGPPGDIGDSIKGLKGQPGDLGDYGDVGEPGDDEPAPHYPQPSMYEWKGIKGEKGKG 306

Query: 180 -------KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
                  +RG +GD    G+P   G  GR G  GE G DG PG+ G  G  G  G  G  
Sbjct: 307 GYGGITGRRGYQGDKGFPGFP---GPKGRAGDKGEQGDDGPPGKQGRPGPFGPSGEKGDK 363

Query: 230 GIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
           G PG  GT G  G TGPR   GNRG  G+ G  G P 
Sbjct: 364 GAPGYEGTPGFDGETGPRGEDGNRGTPGVQGRSGPPG 400



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           ++G  G+ G PG  G  G DG  G PG++G PG  G           G  G PG +G NG
Sbjct: 115 EKGQGGEYGSPGERGSRGDDGERGLPGVEGRPGYQGEA---------GPMGPPGLDGCNG 165

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G  G +G RG  GI G+PG   +  ++ E
Sbjct: 166 TDGAQGAQGARGLQGIRGLPGPQGLQGFRGE 196


>gi|261876471|dbj|BAI47561.1| collagen type VI alpha 1 subunit [Mesocricetus auratus]
          Length = 1026

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 66/122 (54%), Gaps = 3/122 (2%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           +GERG+ G PG  G  G  G PGD    GP G  G  G +G  G++G RGPKG  G  G+
Sbjct: 267 EGERGKPGLPGEKGEAGDPGRPGD---LGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGK 323

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G+DG DG+ GE G  G+PG  G  G  G  G PG  G  G  G  GEKG  G  G  G+
Sbjct: 324 RGIDGIDGMKGETGFPGLPGCKGSPGFDGIQGPPGPKGDAGAFGLKGEKGEAGADGEAGR 383

Query: 253 SG 254
            G
Sbjct: 384 PG 385



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 86/208 (41%), Gaps = 70/208 (33%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------------------- 150
           G+QGP G KG+ GA    G+KGE+GE GA G  G PG                       
Sbjct: 352 GIQGPPGPKGDAGA---FGLKGEKGEAGADGEAGRPGSSGPPGDEGDPGEPGPPGEKGEA 408

Query: 151 -----------------------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
                                        +G  GD G+ GP+GD G  GP GIPGD G+ 
Sbjct: 409 GDEGNAGPDGPPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPIGIPGDSGEA 468

Query: 182 GPKGDMGYPGRIGLDGRDGLP---------------GEPGLDGIPGRNGMDGIPGKDGLP 226
           GP G  GY G  G  G +GL                GE G DG PG NG +G PG  G P
Sbjct: 469 GPIGPKGYRGDEGPPGPEGLRGAPGPAGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYP 527

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G PG NGT G  G+ G  G  G  G
Sbjct: 528 GNRGPPGINGTKGYPGLKGDEGEVGDPG 555



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 74/158 (46%), Gaps = 36/158 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG++GP G  GE G +G+ G +G               P GIPGD G+ GP G  GY G 
Sbjct: 435 PGVRGPRGDPGEAGPQGDQGREG---------------PIGIPGDSGEAGPIGPKGYRGD 479

Query: 172 QGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G PG EG R               G +G+ G PG  G +G  G PG PG  G PG NG 
Sbjct: 480 EGPPGPEGLRGAPGPAGPPGDPGLMGERGEDGPPGN-GTEGFPGFPGYPGNRGPPGINGT 538

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G PG  G  G+ G PG +  +       PRG +G  G
Sbjct: 539 KGYPGLKGDEGEVGDPGEDNND-----ISPRGAKGAKG 571



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 83/190 (43%), Gaps = 30/190 (15%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      E   PG  G +G  G  G KGE G +GE+G +G  G  G  G +GI G +G +
Sbjct: 274 GLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGIDGMK 333

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------ 214
           G  G  G PG +G PG +G +GP G  G  G  GL G  G  G  G  G PG +      
Sbjct: 334 GETGFPGLPGCKGSPGFDGIQGPPGPKGDAGAFGLKGEKGEAGADGEAGRPGSSGPPGDE 393

Query: 215 ---------GMDGIPGKDG---------------LPGKDGIPGTNGTNGEKGMTGPRGNR 250
                    G  G  G +G                 G  G PG  G  G+ G  GP+G++
Sbjct: 394 GDPGEPGPPGEKGEAGDEGNAGPDGPPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQ 453

Query: 251 GKSGINGVPG 260
           G+ G  G+PG
Sbjct: 454 GREGPIGIPG 463



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 89/255 (34%), Gaps = 91/255 (35%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           V  QG           G +GP G KGE G +G  G+ G +GE G PG+ G  G  G  G 
Sbjct: 294 VGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGIDGMKGETGFPGLPGCKGSPGFDGI 353

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI----------------------- 193
           +G  GPKGD    G  G+ G++G+ G  G+ G PG                         
Sbjct: 354 QGPPGPKGDA---GAFGLKGEKGEAGADGEAGRPGSSGPPGDEGDPGEPGPPGEKGEAGD 410

Query: 194 -------------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP-- 226
                                    G+ G  G PGE G  G  GR G  GIPG  G    
Sbjct: 411 EGNAGPDGPPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPIGIPGDSGEAGP 470

Query: 227 -------------------------------------GKDGIPGTNGTNGEKGMTGPRGN 249
                                                G+DG PG NGT G  G  G  GN
Sbjct: 471 IGPKGYRGDEGPPGPEGLRGAPGPAGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYPGN 529

Query: 250 RGKSGINGVPGTPAI 264
           RG  GING  G P +
Sbjct: 530 RGPPGINGTKGYPGL 544



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 30/123 (24%)

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEP------------------- 205
           Y G +G PG  G+   KG+ G PGR   +G  G  G+ GE                    
Sbjct: 266 YEGERGKPGLPGE---KGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKG 322

Query: 206 -----GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                G+DG+ G  G  G+PG  G PG DGI G  G  G+ G  G +G +G++G +G  G
Sbjct: 323 KRGIDGIDGMKGETGFPGLPGCKGSPGFDGIQGPPGPKGDAGAFGLKGEKGEAGADGEAG 382

Query: 261 TPA 263
            P 
Sbjct: 383 RPG 385



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 48/119 (40%), Gaps = 42/119 (35%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------------------PP 148
           G +GPIG  G+ G  G +G KG RG++G PG  G                        PP
Sbjct: 454 GREGPIGIPGDSGEAGPIGPKGYRGDEGPPGPEGLRGAPGPAGPPGDPGLMGERGEDGPP 513

Query: 149 GPQ-----GIPGDEGKRGPKGDMGYPGPQGIPGDEGK-------------RGPKGDMGY 189
           G       G PG  G RGP G  G  G  G+ GDEG+             RG KG  GY
Sbjct: 514 GNGTEGFPGFPGYPGNRGPPGINGTKGYPGLKGDEGEVGDPGEDNNDISPRGAKGAKGY 572


>gi|326677607|ref|XP_002665924.2| PREDICTED: collagen alpha-1(V) chain [Danio rerio]
          Length = 2118

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 82/156 (52%), Gaps = 9/156 (5%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G QGPIG  G  G KG  GV+G +G KG  G  G PG     GD G +G KG++G  G
Sbjct: 1057 PHGPQGPIGYPGPRGVKGADGVRGLKGNKGEKGEDGFPG---FKGDMGVKGDKGELGAAG 1113

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            P+G  G EG +G  G  G PG +G  G  G  G PGL G PGR G  G  G  G  G  G
Sbjct: 1114 PRGEDGPEGPKGRSGLPGDPGPLGPLGEKGKLGVPGLPGYPGRQGPKGSQGFQGFQGTSG 1173

Query: 231  IPGTNGT------NGEKGMTGPRGNRGKSGINGVPG 260
              GT GT       G++G TGPRG RG  G  G  G
Sbjct: 1174 EKGTRGTAGKPGPRGQRGPTGPRGERGPRGPTGKAG 1209



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 84/155 (54%), Gaps = 9/155 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+ G  G  G  G +G  G KG  G  G  G +G PGP+G+ G +G RG KG+ G  G 
Sbjct: 1031 PGMPGADGPPGHPGKEGPSGEKGNLGPHGPQGPIGYPGPRGVKGADGVRGLKGNKGEKGE 1090

Query: 172  QGIP---GDEGKRGPKGDMGYPGRIGLD------GRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G P   GD G +G KG++G  G  G D      GR GLPG+PG  G  G  G  G+PG 
Sbjct: 1091 DGFPGFKGDMGVKGDKGELGAAGPRGEDGPEGPKGRSGLPGDPGPLGPLGEKGKLGVPGL 1150

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G PG+ G  G+ G  G +G +G +G RG +G  G
Sbjct: 1151 PGYPGRQGPKGSQGFQGFQGTSGEKGTRGTAGKPG 1185



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 75/141 (53%), Gaps = 6/141 (4%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            E G  G+ G+ G  G  G PG  G  GP G  G+ G  GP+G +GYPGP+G+ G +G RG
Sbjct: 1021 EKGPTGKPGLPGMPGADGPPGHPGKEGPSGEKGNLGPHGPQGPIGYPGPRGVKGADGVRG 1080

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             KG+ G        G DG PG  G  G+ G  G  G  G  G  G +G  G +G  G+ G
Sbjct: 1081 LKGNKGE------KGEDGFPGFKGDMGVKGDKGELGAAGPRGEDGPEGPKGRSGLPGDPG 1134

Query: 243  MTGPRGNRGKSGINGVPGTPA 263
              GP G +GK G+ G+PG P 
Sbjct: 1135 PLGPLGEKGKLGVPGLPGYPG 1155



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 74/146 (50%), Gaps = 21/146 (14%)

Query: 113  GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPK 163
            GL+G  G+KGE    G KG+MGVKG++GE GA G  G  GP+      G+PGD G  GP 
Sbjct: 1080 GLKGNKGEKGEDGFPGFKGDMGVKGDKGELGAAGPRGEDGPEGPKGRSGLPGDPGPLGPL 1139

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G+ G  G  G+PG  G++GPKG  G+ G  G  G  G              G  G PG  
Sbjct: 1140 GEKGKLGVPGLPGYPGRQGPKGSQGFQGFQGTSGEKGT------------RGTAGKPGPR 1187

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G  G  G  G  G  G  G  GP+GN
Sbjct: 1188 GQRGPTGPRGERGPRGPTGKAGPKGN 1213



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 101/254 (39%), Gaps = 78/254 (30%)

Query: 99   MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------ 152
            + G    + E  P G +GP+G  G  G  G  G  G  G +G PG  GP G +G      
Sbjct: 856  VSGLKGESGESGPQGPRGPMGSAGPTGKPGRRGRPGSDGARGMPGQTGPKGDRGFDGLAG 915

Query: 153  IPGDEGKRGP---------------KGDMGYPGPQGIPGDEGKRG--------------- 182
            +PG++G RG                +GD G  GP+G+PG+ G RG               
Sbjct: 916  LPGEKGHRGETGPQGPPGPSGEDGERGDDGEVGPRGLPGEPGPRGVLGPKGPQGPPGPPG 975

Query: 183  ---------PKGDMGY------------PGRIGLD---------------GRDGLPGEPG 206
                     PKG++G             PG  GL+               G+ GLPG PG
Sbjct: 976  VTGMDGHPGPKGNIGPQGEPGPPGQQGNPGAQGLNGPQGPIGPPGEKGPTGKPGLPGMPG 1035

Query: 207  LDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             DG PG  G +G  G+       G  G  G PG  G  G  G+ G +GN+G+ G +G PG
Sbjct: 1036 ADGPPGHPGKEGPSGEKGNLGPHGPQGPIGYPGPRGVKGADGVRGLKGNKGEKGEDGFPG 1095

Query: 261  TPAICAYKRESCSL 274
                   K +   L
Sbjct: 1096 FKGDMGVKGDKGEL 1109



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/131 (41%), Positives = 67/131 (51%), Gaps = 30/131 (22%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG-- 173
            GP G++GE GAKGE G++G       PG  GP GPQG P   GK GP+G  G PGP G  
Sbjct: 1677 GPEGRQGEKGAKGESGLEG------PPGKTGPVGPQGSP---GKPGPEGLRGVPGPVGEQ 1727

Query: 174  -------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                               +PG +G  G KG+ G+PG IGL G  G  GE G  G+PG  
Sbjct: 1728 GLPGAPGPDGPPGPMGPPGLPGLKGDLGIKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQ 1787

Query: 215  GMDGIPGKDGL 225
            G  G  G +G+
Sbjct: 1788 GTSGPKGDNGI 1798



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPG 212
            ++G  G  G  G PG  G PG  GK GP G+ G  G  G  G  G PG  G+   DG+ G
Sbjct: 1021 EKGPTGKPGLPGMPGADGPPGHPGKEGPSGEKGNLGPHGPQGPIGYPGPRGVKGADGVRG 1080

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
              G  G  G+DG PG  G  G  G  GE G  GPRG  G  G  G  G P       +  
Sbjct: 1081 LKGNKGEKGEDGFPGFKGDMGVKGDKGELGAAGPRGEDGPEGPKGRSGLPG------DPG 1134

Query: 273  SLLPNSETSQLLIP 286
             L P  E  +L +P
Sbjct: 1135 PLGPLGEKGKLGVP 1148



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 71/149 (47%), Gaps = 23/149 (15%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEG-------KRGPKGDMGYPGPQGIPGDEGK------ 180
           GE GE+G PG  G PG  G+PG  G       +    GD G  GP  +   E +      
Sbjct: 771 GEPGERGLPGRAGLPGADGLPGPPGTVLMLPFRMSTGGDGGQKGPA-VSAQEAQMQAIMQ 829

Query: 181 ------RGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                 RGP G MG  GR G  G     GL GE G  G  G  G  G  G  G PG+ G 
Sbjct: 830 QARLAMRGPTGPMGLTGRPGPLGPPGVSGLKGESGESGPQGPRGPMGSAGPTGKPGRRGR 889

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG++G  G  G TGP+G+RG  G+ G+PG
Sbjct: 890 PGSDGARGMPGQTGPKGDRGFDGLAGLPG 918



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP+G+KG++G  G  G  G +G KG+ G       QG  G  G++G +G  G PGP
Sbjct: 1133 PGPLGPLGEKGKLGVPGLPGYPGRQGPKGSQGF------QGFQGTSGEKGTRGTAGKPGP 1186

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDG 197
            +G  G  G RG +G  G  G+ G  G
Sbjct: 1187 RGQRGPTGPRGERGPRGPTGKAGPKG 1212



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 9/75 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G++G  G++G  G +G  GEKG  G  G PGP+      G+RGP G  G  GP
Sbjct: 1148 PGLPGYPGRQGPKGSQGFQGFQGTSGEKGTRGTAGKPGPR------GQRGPTGPRGERGP 1201

Query: 172  QGIPGDEGKRGPKGD 186
            +G     GK GPKG+
Sbjct: 1202 RGP---TGKAGPKGN 1213



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 59/122 (48%), Gaps = 18/122 (14%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------- 204
            G EG++G KG  G  G +G PG  G  GP+G  G PG  GL G  G  GE          
Sbjct: 1677 GPEGRQGEKGAKGESGLEGPPGKTGPVGPQGSPGKPGPEGLRGVPGPVGEQGLPGAPGPD 1736

Query: 205  --------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                    PGL G+ G  G+ G  G  GL G  G PG  G  G++G+ GP+G  G  G N
Sbjct: 1737 GPPGPMGPPGLPGLKGDLGIKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGTSGPKGDN 1796

Query: 257  GV 258
            G+
Sbjct: 1797 GI 1798


>gi|291413262|ref|XP_002722890.1| PREDICTED: collagen, type V, alpha 3-like [Oryctolagus cuniculus]
          Length = 1754

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 83/154 (53%), Gaps = 6/154 (3%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGD 177
            +G  GAKGE+G  G  G++G  G  G PGP+G PGD G  G KGD G PGP    G PG+
Sbjct: 959  EGREGAKGELGPPGPLGKEGPAGPRGFPGPKGAPGDPGPVGLKGDKGPPGPVGANGSPGE 1018

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGT 234
             G  GP G +G PG+ G  G  G  GE G     G  G  G DGIPG  GLPG  G PG 
Sbjct: 1019 RGPLGPAGGIGLPGQSGGQGPVGPAGEKGSLGERGAAGPTGKDGIPGPLGLPGPSGAPGP 1078

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +G  G+KG  G  G++G  G  G  G P     +
Sbjct: 1079 SGEEGDKGEVGAPGHKGNKGDKGEAGPPGPTGIR 1112



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 82/154 (53%), Gaps = 12/154 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QGP+G  GE G+ GE G  G  G+ G PG +G PGP G PG  G+ G KG++G PG +
Sbjct: 1035 GGQGPVGPAGEKGSLGERGAAGPTGKDGIPGPLGLPGPSGAPGPSGEEGDKGEVGAPGHK 1094

Query: 173  GIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G  GD+G+         RGP    G+PG  G DG  G  G PGL G  G +G+ G  G  
Sbjct: 1095 GNKGDKGEAGPPGPTGIRGP---AGHPGSPGADGAQGRRGPPGLFGQKGDDGLRGFVGVI 1151

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG  G+PG  G  GE G  G  G  G  G  G
Sbjct: 1152 GPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRG 1185



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 21/188 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVGPPGPQGIPGD 156
            PG  GP+G KG+ G  G +G  G  GE+G                 G VGP G +G  G+
Sbjct: 992  PGDPGPVGLKGDKGPPGPVGANGSPGERGPLGPAGGIGLPGQSGGQGPVGPAGEKGSLGE 1051

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G  GP G  G PGP G+PG  G  GP      KG++G PG  G  G  G  G PG  GI
Sbjct: 1052 RGAAGPTGKDGIPGPLGLPGPSGAPGPSGEEGDKGEVGAPGHKGNKGDKGEAGPPGPTGI 1111

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G  G  G PG DG  G+ G PG  G  G+ G+ G  G  G  G+ G+PG P       +
Sbjct: 1112 RGPAGHPGSPGADGAQGRRGPPGLFGQKGDDGLRGFVGVIGPPGLQGLPGPPGEKGEVGD 1171

Query: 271  SCSLLPNS 278
              S+ P+ 
Sbjct: 1172 VGSMGPHG 1179



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 84/169 (49%), Gaps = 30/169 (17%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------------------- 156
            G+ G  G +GE+G +G+ G  G  GV+GP   QG  G+                      
Sbjct: 900  GRPGHPGQRGELGFQGQTGPPGPAGVLGP---QGKTGEAGPLGERGPPGPPGPPGEQGLP 956

Query: 157  --EGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
              EG+ G KG++G PGP G  G  G R   GPKG  G PG +GL G  G PG  G +G P
Sbjct: 957  GLEGREGAKGELGPPGPLGKEGPAGPRGFPGPKGAPGDPGPVGLKGDKGPPGPVGANGSP 1016

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G  GLPG+ G  G  G  GEKG  G RG  G +G +G+PG
Sbjct: 1017 GERGPLGPAGGIGLPGQSGGQGPVGPAGEKGSLGERGAAGPTGKDGIPG 1065



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 77/167 (46%), Gaps = 39/167 (23%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVV------------------------GPPGPQGIPGD 156
           KG  G +G  G KGE+GE G PG                          GP GP+G+PG+
Sbjct: 722 KGTSGNRGVQGEKGEKGEDGFPGFKGDGGLKGDRGQPGPPGPRGEDGPEGPKGPEGLPGE 781

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           EG  G  G+ G  G  G+PG  G+ GPKG +G+PG +G                 G  G 
Sbjct: 782 EGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPL---------------GEKGK 826

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G+ GL G+ G PG+ G  G+ G TG  G +G  G +G PG P 
Sbjct: 827 RGKAGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGVPG 873



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 84/167 (50%), Gaps = 33/167 (19%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           +GP G +G  G +G  G  GE+G+ G PG         +PG  G+ GPKG +G+PGP G 
Sbjct: 770 EGPKGPEGLPGEEGPPGAAGEKGKLGVPG---------LPGYPGRPGPKGSIGFPGPLGP 820

Query: 175 PGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL--- 225
            G++GKRG       +G+ G PG  G  G+ G  G+PG  G  G++G  G+PG+ GL   
Sbjct: 821 LGEKGKRGKAGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGVPGEKGLPGL 880

Query: 226 ---------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                           GKDG PG  G  GE G  G  G  G +G+ G
Sbjct: 881 QGPPGFPGPKGPPGSQGKDGRPGHPGQRGELGFQGQTGPPGPAGVLG 927



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/137 (41%), Positives = 68/137 (49%), Gaps = 27/137 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G KGE+GA G  G KG++GE       GPPGP GI         +G  G+PG 
Sbjct: 1076 PGPSGEEGDKGEVGAPGHKGNKGDKGE------AGPPGPTGI---------RGPAGHPGS 1120

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G  G +G+RGP G  G  G  GL G  G+ G PGL G+PG             PG+ G 
Sbjct: 1121 PGADGAQGRRGPPGLFGQKGDDGLRGFVGVIGPPGLQGLPGP------------PGEKGE 1168

Query: 232  PGTNGTNGEKGMTGPRG 248
             G  G+ G  G  GPRG
Sbjct: 1169 VGDVGSMGPHGAPGPRG 1185



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 78/157 (49%), Gaps = 15/157 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G  GE G  G  G+ G  G  G  G +G PGP G  G++GKRG  G  G  G 
Sbjct: 779 PGEEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPGLEGE 838

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM--------------- 216
           +G PG  G+RG  G  G PG  G  G+DG PG PG  G+PG  G                
Sbjct: 839 RGPPGSRGERGQPGATGQPGPKGDVGQDGAPGVPGEKGLPGLQGPPGFPGPKGPPGSQGK 898

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           DG PG  G  G+ G  G  G  G  G+ GP+G  G++
Sbjct: 899 DGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEA 935



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 91/235 (38%), Gaps = 72/235 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE------RGEKGAPGVVGPPGPQ---------GIPGD 156
            PG  GP+G+KG+ G  G+ G++GE      RGE+G PG  G PGP+         G+PG+
Sbjct: 815  PGPLGPLGEKGKRGKAGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGVPGE 874

Query: 157  E---------------------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG- 188
            +                           G  G +G++G+ G  G PG  G  GP+G  G 
Sbjct: 875  KGLPGLQGPPGFPGPKGPPGSQGKDGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGE 934

Query: 189  -----------------------YPGRIGLDGRDGLPGEPGLD------GIPGRNGMDGI 219
                                     GR G  G  G PG  G +      G PG  G  G 
Sbjct: 935  AGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKEGPAGPRGFPGPKGAPGD 994

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            PG  GL G  G PG  G NG  G  GP G  G  G+ G  G         E  SL
Sbjct: 995  PGPVGLKGDKGPPGPVGANGSPGERGPLGPAGGIGLPGQSGGQGPVGPAGEKGSL 1049



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 83/195 (42%), Gaps = 57/195 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPPGPQG 152
           PPG  G  G+ G +G  G  G+KGE GE                  +G  G  G  G +G
Sbjct: 487 PPGPVGLTGRPGPVGLPGYPGMKGEMGEMGPQGPRGLQGPPGPPGREGKMGRSGADGARG 546

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDG 209
           +PGD    GPKGD G+ G  G+PG++G+RG  G +G PG  G DG    +G PG  G  G
Sbjct: 547 LPGD---TGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGEKGAEGPPGPTGQAG 603

Query: 210 IPGRNGM------------------DGIPGKDG---------------LPGKDGIPGTNG 236
            PG  G+                  DG PG  G                PG  GIPG  G
Sbjct: 604 EPGPRGLIGPRGSPGPPGRPGATGSDGAPGAKGNVGPPGEPGPPGQQGNPGSQGIPGPQG 663

Query: 237 TNGEKGMTGPRGNRG 251
             G  G  GP GN G
Sbjct: 664 LIGTPGEKGPPGNAG 678



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 77/177 (43%), Gaps = 54/177 (30%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPKGDMGYPGPQGIPGD--- 177
           +G+MG  G  G +G PG  GP G +      G+PG++G+RG  G +G PGP G  G+   
Sbjct: 533 EGKMGRSGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGEKGA 592

Query: 178 EGKRGPKGDMGYPGRIGL---------------DGRDGLPGE------------------ 204
           EG  GP G  G PG  GL                G DG PG                   
Sbjct: 593 EGPPGPTGQAGEPGPRGLIGPRGSPGPPGRPGATGSDGAPGAKGNVGPPGEPGPPGQQGN 652

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGI------------PGTNGTNGEKGMTGPRGN 249
           PG  GIPG  G+ G PG+ G PG  GI            PG  G  GEKG  GP G+
Sbjct: 653 PGSQGIPGPQGLIGTPGEKGPPGNAGIQGPPGADGPPGHPGQEGPTGEKGSQGPAGS 709



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/131 (41%), Positives = 62/131 (47%), Gaps = 24/131 (18%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------------------GIPGD 177
           +G  G  G+ G PGP G+PG  G    KG+MG  GPQ                  G  G 
Sbjct: 485 KGPPGPVGLTGRPGPVGLPGYPGM---KGEMGEMGPQGPRGLQGPPGPPGREGKMGRSGA 541

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
           +G RG  GD G  G  G DG  GLPGE G  G  G  G  G PG+DG  G +G PG  G 
Sbjct: 542 DGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGEKGAEGPPGPTGQ 601

Query: 238 NGEKGMTGPRG 248
            GE    GPRG
Sbjct: 602 AGE---PGPRG 609



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 79/208 (37%), Gaps = 60/208 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP G  G  G  G +G KG+RG+ G PG+ G  GP   PG  G+RG  G  G PGP
Sbjct: 803  PGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPGLEGERGP---PGSRGERGQPGATGQPGP 859

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGL------------------DGRDGLPGEPGLDGIPGR 213
            +G  G +G        G PG  GL                   G+DG PG PG  G  G 
Sbjct: 860  KGDVGQDGA------PGVPGEKGLPGLQGPPGFPGPKGPPGSQGKDGRPGHPGQRGELGF 913

Query: 214  NGMDGIPGKDG---------------------------------LPGKDGIPGTNGTNGE 240
             G  G PG  G                                 L G++G  G  G  G 
Sbjct: 914  QGQTGPPGPAGVLGPQGKTGEAGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGP 973

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  GP G RG  G  G PG P     K
Sbjct: 974  LGKEGPAGPRGFPGPKGAPGDPGPVGLK 1001



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 59/125 (47%), Gaps = 27/125 (21%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG---------------YPGRIGLDGRDGL 201
           +G  GP G  G PGP G+PG  G +G  G+MG                 G++G  G DG 
Sbjct: 485 KGPPGPVGLTGRPGPVGLPGYPGMKGEMGEMGPQGPRGLQGPPGPPGREGKMGRSGADGA 544

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGK 252
            G PG  G  G  G DG+P   GLPG+          G PG  G +GEKG  GP G  G+
Sbjct: 545 RGLPGDTGPKGDRGFDGLP---GLPGEKGQRGDFGHVGQPGPPGEDGEKGAEGPPGPTGQ 601

Query: 253 SGING 257
           +G  G
Sbjct: 602 AGEPG 606



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 12/84 (14%)

Query: 108  EYCPPG---LQGPIGQKGEIGAKGE---------MGVKGERGEKGAPGVVGPPGPQGIPG 155
            E  PPG   ++GP G  G  GA G           G KG+ G +G  GV+GPPG QG+PG
Sbjct: 1102 EAGPPGPTGIRGPAGHPGSPGADGAQGRRGPPGLFGQKGDDGLRGFVGVIGPPGLQGLPG 1161

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEG 179
              G++G  GD+G  GP G PG  G
Sbjct: 1162 PPGEKGEVGDVGSMGPHGAPGPRG 1185



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 83/203 (40%), Gaps = 57/203 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVK---------------GERGEKGAPGVVGPP-------- 148
           PG QG IG  GE G  G  G++               G  GEKG+ G  G          
Sbjct: 659 PGPQGLIGTPGEKGPPGNAGIQGPPGADGPPGHPGQEGPTGEKGSQGPAGSAGPPGYPGP 718

Query: 149 ----GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR------------------GPKGD 186
               G  G  G +G++G KG+ G+PG     GD G +                  GPKG 
Sbjct: 719 RGVKGTSGNRGVQGEKGEKGEDGFPG---FKGDGGLKGDRGQPGPPGPRGEDGPEGPKGP 775

Query: 187 MGYPGR------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGT 237
            G PG        G  G+ G+PG PG  G PG  G  G PG  G     GK G  G  G 
Sbjct: 776 EGLPGEEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPGL 835

Query: 238 NGEKGMTGPRGNRGKSGINGVPG 260
            GE+G  G RG RG+ G  G PG
Sbjct: 836 EGERGPPGSRGERGQPGATGQPG 858



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 76/184 (41%), Gaps = 54/184 (29%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIP------------------GDEGKRGPKGDM--- 166
           G  G+ G +G  G PG  GPPG  GI                   G++G +GP G     
Sbjct: 654 GSQGIPGPQGLIGTPGEKGPPGNAGIQGPPGADGPPGHPGQEGPTGEKGSQGPAGSAGPP 713

Query: 167 ---------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLD--------------------- 196
                    G  G +G+ G++G++G  G  G+ G  GL                      
Sbjct: 714 GYPGPRGVKGTSGNRGVQGEKGEKGEDGFPGFKGDGGLKGDRGQPGPPGPRGEDGPEGPK 773

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G +GLPGE G  G  G  G  G+PG  G PG+   PG  G+ G  G  GP G +GK G  
Sbjct: 774 GPEGLPGEEGPPGAAGEKGKLGVPGLPGYPGR---PGPKGSIGFPGPLGPLGEKGKRGKA 830

Query: 257 GVPG 260
           G PG
Sbjct: 831 GQPG 834



 Score = 40.0 bits (92), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 96/247 (38%), Gaps = 90/247 (36%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGI------------ 153
           PGL G  GQ+G+ G  G+ G  GE GEKGA G  GP      PGP+G+            
Sbjct: 563 PGLPGEKGQRGDFGHVGQPGPPGEDGEKGAEGPPGPTGQAGEPGPRGLIGPRGSPGPPGR 622

Query: 154 ---PGDEGKRGPKGDMGY------------PGPQGIPGDEGKRGPKGDMGYPGRIGLD-- 196
               G +G  G KG++G             PG QGIPG +G  G  G+ G PG  G+   
Sbjct: 623 PGATGSDGAPGAKGNVGPPGEPGPPGQQGNPGSQGIPGPQGLIGTPGEKGPPGNAGIQGP 682

Query: 197 ----------GRDGLPGEPGLDG---------------IPGRNGMDGIPGKDGLPGKDGI 231
                     G++G  GE G  G               + G +G  G+ G+ G  G+DG 
Sbjct: 683 PGADGPPGHPGQEGPTGEKGSQGPAGSAGPPGYPGPRGVKGTSGNRGVQGEKGEKGEDGF 742

Query: 232 PGTNGTN------------------------------GEKGMTGPRGNRGKSGINGVPGT 261
           PG  G                                GE+G  G  G +GK G+ G+PG 
Sbjct: 743 PGFKGDGGLKGDRGQPGPPGPRGEDGPEGPKGPEGLPGEEGPPGAAGEKGKLGVPGLPGY 802

Query: 262 PAICAYK 268
           P     K
Sbjct: 803 PGRPGPK 809


>gi|334323754|ref|XP_003340431.1| PREDICTED: collagen alpha-2(XI) chain-like [Monodelphis domestica]
          Length = 1384

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 87/161 (54%), Gaps = 15/161 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE G +G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 347 PGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPAGTKGNQGPSGPQGPLGYPGP 406

Query: 172 QGIPGDEGKRG-------------P--KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G+ G +G RG             P  KGDMG  G  G  G  GLPG PG  G  G  G 
Sbjct: 407 RGVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGKLGVPGLPGYPGRQGPKGSLGF 466

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG +G  G  G+ G +G  GE+G TGPRG RG  G  G
Sbjct: 467 PGFPGANGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATG 507



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/188 (40%), Positives = 95/188 (50%), Gaps = 36/188 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY 168
           PGL G  G +GE G++G  G  GE GE+G  G +GP   PG  G+ G +G  GPKG++G 
Sbjct: 269 PGLPGEKGHRGESGSQGLPGPPGEDGERGDDGEIGPRGLPGESGVRGIDGPHGPKGNLGP 328

Query: 169 ------------PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                       PG QG+PG +G  GP   KG  G PG  G+ G DG PG PG +G  G 
Sbjct: 329 QGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPAGT 388

Query: 214 NGMD---------GIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRGNRGKSGI 255
            G           G PG  G+ G DGI G  G  GEKG           G +G+RGK G+
Sbjct: 389 KGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGKLGV 448

Query: 256 NGVPGTPA 263
            G+PG P 
Sbjct: 449 PGLPGYPG 456



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 95/186 (51%), Gaps = 36/186 (19%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRG 161
           PPG  G  G+ G  GA+G   E GVKG+RG  G PG+ G        G QG+PG  G+ G
Sbjct: 235 PPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGESGSQGLPGPPGEDG 294

Query: 162 PKGDMGYPGPQGIPGDEGKRG------PKGDM------------------GYPG---RIG 194
            +GD G  GP+G+PG+ G RG      PKG++                  G PG    IG
Sbjct: 295 ERGDDGEIGPRGLPGESGVRGIDGPHGPKGNLGPQGEPGPPGQQGTPGTQGLPGPQGAIG 354

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G+PGL G+PG +G  G PGK+G  G  G  G +G  G  G  GPRG +G  G
Sbjct: 355 PHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPAGTKGNQGPSGPQGPLGYPGPRGVKGVDG 414

Query: 255 INGVPG 260
           I G+ G
Sbjct: 415 IRGLKG 420



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 87/175 (49%), Gaps = 27/175 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------GPQGIPGDEGKR 160
           G  GP+G  G  G KGE G  G +G +G  G+ GPP            G +G+PG+ G  
Sbjct: 201 GRPGPLGHPGSPGLKGESGDLGPQGPRGPQGLSGPPGKAGRRGRAGADGARGMPGEPGV- 259

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
             KGD G+ G  G+PG++G RG  G  G PG  G DG  G  GE G  G+PG +G+ GI 
Sbjct: 260 --KGDRGFDGLPGLPGEKGHRGESGSQGLPGPPGEDGERGDDGEIGPRGLPGESGVRGID 317

Query: 221 GKDGLPG------------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G            + G PGT G  G +G  GP G +G  G  G+PG P 
Sbjct: 318 GPHGPKGNLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPG 372



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/132 (43%), Positives = 72/132 (54%), Gaps = 15/132 (11%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGR 192
           RG  G  G  G PGP G PG  G +G  GD+G  GP   QG+       GP G  G  GR
Sbjct: 191 RGPPGPMGYTGRPGPLGHPGSPGLKGESGDLGPQGPRGPQGLS------GPPGKAGRRGR 244

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGP 246
            G DG  G+PGEPG+ G  G +G+ G+PG+ G  G+ G       PG +G  G+ G  GP
Sbjct: 245 AGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGESGSQGLPGPPGEDGERGDDGEIGP 304

Query: 247 RGNRGKSGINGV 258
           RG  G+SG+ G+
Sbjct: 305 RGLPGESGVRGI 316



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 75/139 (53%), Gaps = 6/139 (4%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKRGPKGDMGYPG 170
           L+GP G  G  G  G +G  G  G KG  G +GP    GPQG+ G  GK G +G  G  G
Sbjct: 190 LRGPPGPMGYTGRPGPLGHPGSPGLKGESGDLGPQGPRGPQGLSGPPGKAGRRGRAGADG 249

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            +G+PG+ G    KGD G+ G  GL G  G  GE G  G+PG  G DG  G DG  G  G
Sbjct: 250 ARGMPGEPGV---KGDRGFDGLPGLPGEKGHRGESGSQGLPGPPGEDGERGDDGEIGPRG 306

Query: 231 IPGTNGTNGEKGMTGPRGN 249
           +PG +G  G  G  GP+GN
Sbjct: 307 LPGESGVRGIDGPHGPKGN 325



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 64/149 (42%), Gaps = 54/149 (36%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG+MGVKG+RG+ G PG         +PG  G++GPKG +G+P
Sbjct: 417 GLKGHKGEKGEDGFPGFKGDMGVKGDRGKLGVPG---------LPGYPGRQGPKGSLGFP 467

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
                                                  G PG NG  G     GL GK 
Sbjct: 468 ---------------------------------------GFPGANGEKGA---RGLSGKS 485

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G  G  G +G  GPRG  GKSG  G 
Sbjct: 486 GPRGERGPTGPRGQRGPRGATGKSGAKGT 514



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 48/93 (51%)

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           RGP G MGY GR G  G  G PG  G  G  G  G  G  G  G PGK G  G  G +G 
Sbjct: 191 RGPPGPMGYTGRPGPLGHPGSPGLKGESGDLGPQGPRGPQGLSGPPGKAGRRGRAGADGA 250

Query: 241 KGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           +GM G  G +G  G +G+PG P    ++ ES S
Sbjct: 251 RGMPGEPGVKGDRGFDGLPGLPGEKGHRGESGS 283



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 57/125 (45%), Gaps = 24/125 (19%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----- 176
            G  G +GE G KGE+G  GAPG  GP GP G     GK GP G  G PG  G  G     
Sbjct: 975  GPEGRQGEKGAKGEQGAVGAPGKTGPVGPAGA---AGKPGPDGLRGIPGSVGQQGRPGAT 1031

Query: 177  ----------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                              G  G KG+ G+PG IGL G  G  GE G  G+PG  G  G  
Sbjct: 1032 GPAGPPGPVGPPGLPGLRGDPGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGAHGQK 1091

Query: 221  GKDGL 225
            G+ G+
Sbjct: 1092 GETGI 1096


>gi|109110583|ref|XP_001097041.1| PREDICTED: collagen alpha-1(XXVII) chain-like, partial [Macaca
           mulatta]
          Length = 1232

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 89/165 (53%), Gaps = 27/165 (16%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYPGPQGI 174
           K   GAKG+MG+ G  G  G PG  G    PGP G PG++G+ GP+G     GYPG QG+
Sbjct: 677 KAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGL 736

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PG  G  GPKG  GY   IGL G  GLP   GE GL G+PG+ G  G+PG  G+ G+ G 
Sbjct: 737 PGPVGDPGPKGSRGY---IGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGP 793

Query: 232 PGTNGTNGEK---------------GMTGPRGNRGKSGINGVPGT 261
           PG +G  GE                G+ GP G  G  G+ G+ G+
Sbjct: 794 PGLDGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGS 838



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 94/189 (49%), Gaps = 42/189 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KG +G+ GE G+KG++GE+G PGV       G PG +G +G +G  G+PG +
Sbjct: 825  GYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGV------SGDPGFQGDKGSQGLPGFPGAR 878

Query: 173  GIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-- 215
            G PG  GK G KG               D+G PG    +G +G+ G+PG  G+PG  G  
Sbjct: 879  GKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGD---NGPEGMKGKPGARGLPGPRGQL 935

Query: 216  ----------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                            ++G PG+ G PG+ G+ G  G  G+ G  GP G +G  G  G+ 
Sbjct: 936  GPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIGLV 995

Query: 260  GTPAICAYK 268
            G P I   K
Sbjct: 996  GEPGIVGEK 1004



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 76/144 (52%), Gaps = 12/144 (8%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++G
Sbjct: 667 QKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQG 717

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 718 QPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 777

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G RG  G++G PG
Sbjct: 778 KMGMPGFPGVFGERGPPGLDGNPG 801



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 695 PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGL 754

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN----------- 214
           PG  G+PG +G+RG  G  G  G++G+ G  G+ GE   PGLDG PG             
Sbjct: 755 PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGL 814

Query: 215 -GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G PG  G+ G  G+ GE G+ G +G +G  G++G PG
Sbjct: 815 IGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 861



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 83/187 (44%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPK--------- 163
           GP G +G IG  G  G+ G  GE+G PGV G  G  G+PG     G+RGP          
Sbjct: 744 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGEL 803

Query: 164 ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                       GD+G  GP G PG +G +G  G +G PG  G  G  G+P   G+PG  
Sbjct: 804 GLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQ 863

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKS 253
           G  G  G+ G PG  G PG  G  G  G+                G  G  GP G +GK 
Sbjct: 864 GDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 923

Query: 254 GINGVPG 260
           G  G+PG
Sbjct: 924 GARGLPG 930



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 71/174 (40%), Gaps = 60/174 (34%)

Query: 144 VVGPPGPQG------------------------------------------IPGDEG--- 158
           ++GPPGP+G                                            GD G   
Sbjct: 616 LMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSP 675

Query: 159 ---KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPG 212
                G KGDMG PG  G PG  G+   KG  GYPG  G  G  G P   G PG  G PG
Sbjct: 676 GKAHDGAKGDMGLPGLSGNPGPPGR---KGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPG 732

Query: 213 RNGMDGI---PGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           R G+ G    PG  G  G  G+P   G  G++GE+G+ G  G RGK G+ G PG
Sbjct: 733 RQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPG 786



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 6/85 (7%)

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GPKG  G  G  G+PG+ G +G  G +G PG  GL G+ G   EPGL+G  G  G DG+ 
Sbjct: 1140 GPKGPPGAAGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRG---EPGLEGDSGPMGPDGLK 1196

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTG 245
            G  G PG D   G +G  G++G+ G
Sbjct: 1197 GDRGDPGPD---GEHGEKGQEGLMG 1218



 Score = 46.2 bits (108), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 18/105 (17%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKG---------APGVVGPPGPQGIPGDEGKRG 161
            PPG  GP G KG+ GA+G  G +G+ G +G         APG+ G PG +G PG  G  G
Sbjct: 910  PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDG 969

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             KG+         PGD G+ GP G+ G+ G IGL G  G+ GE G
Sbjct: 970  VKGE---------PGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKG 1005



 Score = 46.2 bits (108), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 6/76 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGP---KGDM 166
            G +GP G  GE G  GE G+KG+ G  G PG   ++G  G  G+ GD G  GP   KGD 
Sbjct: 1140 GPKGPPGAAGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDR 1199

Query: 167  GYPGPQGIPGDEGKRG 182
            G PGP G  G++G+ G
Sbjct: 1200 GDPGPDGEHGEKGQEG 1215


>gi|313212608|emb|CBY36561.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 91/158 (57%), Gaps = 4/158 (2%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G+ G++G+K  +G  GE G  G+PG  G  GP G+PG++G+ GPKG+ G  G  G P
Sbjct: 187 GPSGEPGQLGSK--IGKPGEPGRIGSPGETGDRGPAGVPGEDGRPGPKGEKGSEGGIGAP 244

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G  G  G  G PG  G +G  G  G PGL G  GRNG DG PG  G  GK G PG++
Sbjct: 245 GMPGSPGSPGVSGRPGADGPNGEKGSAGLPGLSGEAGRNGKDGHPGVPGETGKQGPPGSS 304

Query: 236 --GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             G  G  G+ GPRG+ G  G+ G PGTP     + E+
Sbjct: 305 IPGAPGSAGLPGPRGSSGPRGVAGAPGTPGKNGERGET 342



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 93/168 (55%), Gaps = 17/168 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG----PQGIPGDEGKRGPKGDMGY 168
           G +G  G +G+ G  G  G  G  G+ G PG  GPPG    P+G+ G+ GK GPKGD G 
Sbjct: 632 GPKGERGHQGKSGKPGAAGTPGRSGKDGIPGEDGPPGAKVGPRGLRGEIGKTGPKGDRGP 691

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            GP G+PGD G  G KGD G PG  GLDG  GL GE G  GI G  G +GI G  G PG+
Sbjct: 692 EGPHGVPGDPGDTGAKGDQGPPGARGLDGELGLSGEKGNRGIAGPPGKEGIKGPQGNPGE 751

Query: 229 DGIP--------GTNGTNGEKGMTGPRG-----NRGKSGINGVPGTPA 263
            G P        G  G  G+ GM+GP G     + G++G  G+PGTP 
Sbjct: 752 QGRPGIPGPKAKGAKGPKGDTGMSGPPGPQGLPDAGEAGNPGLPGTPG 799



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 97/201 (48%), Gaps = 56/201 (27%)

Query: 119 GQKGEIGAK-GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI--- 174
           G+ G  GAK G  G++GE G+ G  G  GP GP G+PGD G  G KGD G PG +G+   
Sbjct: 662 GEDGPPGAKVGPRGLRGEIGKTGPKGDRGPEGPHGVPGDPGDTGAKGDQGPPGARGLDGE 721

Query: 175 ---------------PGDEGKRGPKGDMGYPGRIGL--------------------DGRD 199
                          PG EG +GP+G+ G  GR G+                     G  
Sbjct: 722 LGLSGEKGNRGIAGPPGKEGIKGPQGNPGEQGRPGIPGPKAKGAKGPKGDTGMSGPPGPQ 781

Query: 200 GLP-----GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------------GEKG 242
           GLP     G PGL G PG+NG  G+PG  G PG DG+PG  G N            G+KG
Sbjct: 782 GLPDAGEAGNPGLPGTPGKNGTPGLPGNLGEPGADGLPGAPGANGLPGETGKAGQPGQKG 841

Query: 243 MTGPRGNRGKSGINGVPGTPA 263
            TGPRG  G+ G+ G+PG P 
Sbjct: 842 STGPRGYDGQDGVPGLPGEPG 862



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 97/186 (52%), Gaps = 43/186 (23%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG--IPGDEGKRGPKGDMGYPGPQGIPG 176
           GQ GE G+ G  G  G RG  G  G +GPPG QG  IPG +G++G KG        G+PG
Sbjct: 432 GQMGEPGSPGRDGSDGPRGPPGERGEIGPPGAQGESIPGQDGQKGEKGS------SGLPG 485

Query: 177 DEGKRGPKGD---------MGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDG 224
           ++G+RG KG+         +G PG+ G  G+ GLPGE   PG DG+   NG DG+PG+ G
Sbjct: 486 EQGRRGQKGESVVVDMKSIIGAPGQRGPSGQPGLPGENGKPGADGL---NGQDGLPGESG 542

Query: 225 ---------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKS-----GINGVPGTPAI 264
                            G  G+PG NG +G KG TGP+G +G +     G+ G+PG P  
Sbjct: 543 PRGLQGPQGPPGPQGQEGSQGVPGRNGEHGPKGNTGPKGLKGATGESTRGLPGIPGRPGD 602

Query: 265 CAYKRE 270
                E
Sbjct: 603 VGLSGE 608



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/190 (41%), Positives = 95/190 (50%), Gaps = 40/190 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPG------PQGIPGDEGK--- 159
           PG  G  G KG+ G  G  G+ GE    GEKG  G+ GPPG      PQG PG++G+   
Sbjct: 698 PGDPGDTGAKGDQGPPGARGLDGELGLSGEKGNRGIAGPPGKEGIKGPQGNPGEQGRPGI 757

Query: 160 --------RGPKGDMGY---PGPQGIP--------GDEGKRGPKGDMGYPGRIGLDGRDG 200
                   +GPKGD G    PGPQG+P        G  G  G  G  G PG +G  G DG
Sbjct: 758 PGPKAKGAKGPKGDTGMSGPPGPQGLPDAGEAGNPGLPGTPGKNGTPGLPGNLGEPGADG 817

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPG------KDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           LPG PG +G+PG  G  G PG+ G  G      +DG+PG  G  GE G     G+ G +G
Sbjct: 818 LPGAPGANGLPGETGKAGQPGQKGSTGPRGYDGQDGVPGLPGEPGEPGQD---GSDGPAG 874

Query: 255 INGVPGTPAI 264
             G PG P I
Sbjct: 875 RTGEPGKPGI 884



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 96/204 (47%), Gaps = 31/204 (15%)

Query: 103 CNSTK-EYCP------PGLQGPIGQKGEIGAKGEMG--------VKGERGEKGAPGVVGP 147
           CN TK E  P      PGL+G  G  G  GAKGE G        + G  G +G+PG    
Sbjct: 120 CNGTKGETGPAGPQGVPGLRGATGAPGNFGAKGEPGSVNVDLSKLTGPAGPRGSPGA--- 176

Query: 148 PGPQGIPGDEGKRGPKGDMGY-------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           PGPQG  G+ G  G  G +G        PG  G PG+ G RGP    G PG    DGR G
Sbjct: 177 PGPQGYTGECGPSGEPGQLGSKIGKPGEPGRIGSPGETGDRGP---AGVPGE---DGRPG 230

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             GE G +G  G  GM G PG  G+ G+ G  G NG  G  G+ G  G  G++G +G PG
Sbjct: 231 PKGEKGSEGGIGAPGMPGSPGSPGVSGRPGADGPNGEKGSAGLPGLSGEAGRNGKDGHPG 290

Query: 261 TPAICAYKRESCSLLPNSETSQLL 284
            P     +    S +P +  S  L
Sbjct: 291 VPGETGKQGPPGSSIPGAPGSAGL 314



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 77/149 (51%), Gaps = 25/149 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMG--VKGERGEKGAPGVVGPPGPQGIP---------------- 154
           G++GP G  GE G  G  G   KG +G KG  G+ GPPGPQG+P                
Sbjct: 741 GIKGPQGNPGEQGRPGIPGPKAKGAKGPKGDTGMSGPPGPQGLPDAGEAGNPGLPGTPGK 800

Query: 155 -------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                  G+ G+ G  G  G PG  G+PG+ GK G  G  G  G  G DG+DG+PG PG 
Sbjct: 801 NGTPGLPGNLGEPGADGLPGAPGANGLPGETGKAGQPGQKGSTGPRGYDGQDGVPGLPGE 860

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
            G PG++G DG  G+ G PGK GI G  G
Sbjct: 861 PGEPGQDGSDGPAGRTGEPGKPGIEGPRG 889



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 80/160 (50%), Gaps = 29/160 (18%)

Query: 127 KGEMGVKGERGEKGAPGVVGP--------------PGPQGIPGD---EGKRGPKGDMGYP 169
           +G  GV G  GE G  G  GP              PG  G PGD    G+ G KG     
Sbjct: 559 EGSQGVPGRNGEHGPKGNTGPKGLKGATGESTRGLPGIPGRPGDVGLSGENGQKGASAVV 618

Query: 170 GPQ-GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           GPQ G  G +G+ GPKG+ G+ G+          G+PG  G PGR+G DGIPG+DG PG 
Sbjct: 619 GPQAGKDGRDGENGPKGERGHQGKS---------GKPGAAGTPGRSGKDGIPGEDGPPGA 669

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
               G  G  GE G TGP+G+RG  G +GVPG P     K
Sbjct: 670 K--VGPRGLRGEIGKTGPKGDRGPEGPHGVPGDPGDTGAK 707



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 83/160 (51%), Gaps = 25/160 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---------KRGP 162
           PG +G  G +G  GA G  G  GERGE      VGP G  G+PG  G         K GP
Sbjct: 315 PGPRGSSGPRGVAGAPGTPGKNGERGET----TVGPKGEPGLPGFPGQDGESCGVCKPGP 370

Query: 163 KGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR--- 213
           KG  G PG        G+PG  G+ GP   +G PG +G +G+ G PG+ G  G PGR   
Sbjct: 371 KGTNGLPGKDGQDGEAGMPGRTGRSGP---IGKPGPLGPEGKSGNPGQQGPPGEPGRHGE 427

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           NG  G  G+ G PG+DG  G  G  GE+G  GP G +G+S
Sbjct: 428 NGQSGQMGEPGSPGRDGSDGPRGPPGERGEIGPPGAQGES 467



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 77/167 (46%), Gaps = 21/167 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYP 169
           G +GP G  GE G  G  G KG  G  GAPG+ G PG  G+   PG +G  G KG  G P
Sbjct: 215 GDRGPAGVPGEDGRPGPKGEKGSEGGIGAPGMPGSPGSPGVSGRPGADGPNGEKGSAGLP 274

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
                          G  G  GR G DG  G+PGE G  G PG + + G PG  GLPG  
Sbjct: 275 ---------------GLSGEAGRNGKDGHPGVPGETGKQGPPGSS-IPGAPGSAGLPGPR 318

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKS--GINGVPGTPAICAYKRESCSL 274
           G  G  G  G  G  G  G RG++  G  G PG P       ESC +
Sbjct: 319 GSSGPRGVAGAPGTPGKNGERGETTVGPKGEPGLPGFPGQDGESCGV 365



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 80/146 (54%), Gaps = 22/146 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP    GE G  GE G  G+ GE G+PG  G  GP+G PG+ G+ GP G  G    
Sbjct: 413 PGQQGP---PGEPGRHGENGQSGQMGEPGSPGRDGSDGPRGPPGERGEIGPPGAQG---- 465

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDG---------LPGEPGLDGIPGRNGMDGIPGK 222
           + IPG +G++G KG  G PG  G  G+ G         + G PG  G    +G  G+PG+
Sbjct: 466 ESIPGQDGQKGEKGSSGLPGEQGRRGQKGESVVVDMKSIIGAPGQRGP---SGQPGLPGE 522

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRG 248
           +G PG DG+   NG +G  G +GPRG
Sbjct: 523 NGKPGADGL---NGQDGLPGESGPRG 545



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 90/188 (47%), Gaps = 26/188 (13%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAK-----------GEMGVKGERGEKGAPGVVG 146
             QG      E+ P G  GP G KG  G             G++G+ GE G+KGA  VVG
Sbjct: 560 GSQGVPGRNGEHGPKGNTGPKGLKGATGESTRGLPGIPGRPGDVGLSGENGQKGASAVVG 619

Query: 147 PPGPQGIPGDEGKRGPKGDMGY------PGPQGIPGDEGKRGPKGDMGYPGRI----GLD 196
           P    G  G +G+ GPKG+ G+      PG  G PG  GK G  G+ G PG      GL 
Sbjct: 620 PQ--AGKDGRDGENGPKGERGHQGKSGKPGAAGTPGRSGKDGIPGEDGPPGAKVGPRGLR 677

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G  G  G  G  G +G+ G PG  G  G  G PG  G +GE G++G +GNRG   I 
Sbjct: 678 GEIGKTGPKGDRGPEGPHGVPGDPGDTGAKGDQGPPGARGLDGELGLSGEKGNRG---IA 734

Query: 257 GVPGTPAI 264
           G PG   I
Sbjct: 735 GPPGKEGI 742



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 81/179 (45%), Gaps = 29/179 (16%)

Query: 112 PGLQGPIGQKGEI------GAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           PGL G  GQ GE       G KG  G+ G   + GE G PG  G  GP G PG  G  G 
Sbjct: 350 PGLPGFPGQDGESCGVCKPGPKGTNGLPGKDGQDGEAGMPGRTGRSGPIGKPGPLGPEGK 409

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG-----------IP 211
            G+ G  GP G PG  G+ G  G MG PG  G DG DG  G PG  G           IP
Sbjct: 410 SGNPGQQGPPGEPGRHGENGQSGQMGEPGSPGRDGSDGPRGPPGERGEIGPPGAQGESIP 469

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTN---------GEKGMTGPRGNRGKSGINGVPGT 261
           G++G  G  G  GLPG+ G  G  G +         G  G  GP G  G  G NG PG 
Sbjct: 470 GQDGQKGEKGSSGLPGEQGRRGQKGESVVVDMKSIIGAPGQRGPSGQPGLPGENGKPGA 528



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 78/169 (46%), Gaps = 26/169 (15%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKG 185
            K  RG  G PG  G  GP G+PG  G        GP G+ G+PGP G  G+ G  G  G
Sbjct: 36  CKSSRGSPGQPGTPGISGPAGLPGTVGAHGPAGPNGPPGERGFPGPIGPKGNAGLPGKPG 95

Query: 186 DMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            MG PG  GLDG+    GLPG PG +G  G  G  G  G  GL G  G PG  G  GE G
Sbjct: 96  KMGVPGIPGLDGQIGASGLPGRPGCNGTKGETGPAGPQGVPGLRGATGAPGNFGAKGEPG 155

Query: 243 --------MTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
                   +TGP G RG       PG P    Y  E C   P+ E  QL
Sbjct: 156 SVNVDLSKLTGPAGPRGS------PGAPGPQGYTGE-CG--PSGEPGQL 195



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 78/157 (49%), Gaps = 20/157 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G  G +GA G  G  G  GE+G PG +GP G  G+PG  GK      MG PG 
Sbjct: 49  PGISGPAGLPGTVGAHGPAGPNGPPGERGFPGPIGPKGNAGLPGKPGK------MGVPG- 101

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG- 230
             IPG +G+    G  G PGR G +G  G  G  G  G+PG  G  G PG  G  G+ G 
Sbjct: 102 --IPGLDGQ---IGASGLPGRPGCNGTKGETGPAGPQGVPGLRGATGAPGNFGAKGEPGS 156

Query: 231 -------IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                  + G  G  G  G  GP+G  G+ G +G PG
Sbjct: 157 VNVDLSKLTGPAGPRGSPGAPGPQGYTGECGPSGEPG 193


>gi|390349001|ref|XP_794521.3| PREDICTED: collagen alpha-3(V) chain-like [Strongylocentrotus
            purpuratus]
          Length = 1782

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 89/179 (49%), Gaps = 33/179 (18%)

Query: 112  PGLQGPIGQKGE------------IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            PG  GP G KGE            IG +G  G  G +GE G PG+ G PGPQG PG  G 
Sbjct: 1062 PGQSGPRGPKGEEGSGGNPGAPGPIGLQGMPGPSGSKGETGDPGLTGAPGPQGNPGKRGS 1121

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG------RDGLPGEPGLDGIPGR 213
             G +G  G PGP+G  G  G +G KGD G  GR G DG        G+ GEPG  G+PG 
Sbjct: 1122 TGSQGIQGQPGPRGDNGAGGLKGDKGDPGPNGRTGRDGPRGFKGDSGVKGEPGSTGLPGN 1181

Query: 214  NGMDGI---------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  GI               PG+ GLPG +G+PGT G  G+ G  G  G  G  GI+G
Sbjct: 1182 PGPRGIEGPSGPKGNQGPLGFPGELGLPGPEGVPGTIGEPGQSGSDGDPGPIGMQGISG 1240



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/163 (43%), Positives = 89/163 (54%), Gaps = 12/163 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGD---M 166
            G  GP G  GE G  G+ G +G +GE+G+ G  G PGP   QG+PG  G +G  GD    
Sbjct: 1048 GESGPPGDDGEQGIPGQSGPRGPKGEEGSGGNPGAPGPIGLQGMPGPSGSKGETGDPGLT 1107

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKD 223
            G PGPQG PG  G  G +G  G PG  G +G  GL    G+PG +G  GR+G  G  G  
Sbjct: 1108 GAPGPQGNPGKRGSTGSQGIQGQPGPRGDNGAGGLKGDKGDPGPNGRTGRDGPRGFKGDS 1167

Query: 224  GL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+   PG  G+PG  G  G +G +GP+GN+G  G  G  G P 
Sbjct: 1168 GVKGEPGSTGLPGNPGPRGIEGPSGPKGNQGPLGFPGELGLPG 1210



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 74/145 (51%), Gaps = 9/145 (6%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G +G  G +G  G +G+ G PGV GP G  GIPG  G  GP G          PG +
Sbjct: 577 GGPGPMGKHGPVGAMGPQGQSGPPGVQGPVGKPGIPGVPGTDGPAGH---------PGQD 627

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G+ G KG MG PG IG+ G  G  G  G  GI G +G  G  G DGLPG  G  G  G  
Sbjct: 628 GQSGAKGSMGAPGSIGVSGYTGPMGVKGARGIFGNSGQKGNSGMDGLPGFKGELGMKGER 687

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPA 263
           G+ G+ GPRG+ G  G  G  G P 
Sbjct: 688 GQLGVPGPRGSEGIGGPKGEQGMPG 712



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 110/219 (50%), Gaps = 31/219 (14%)

Query: 72   REKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGL------QGPIGQKGEIG 125
            R  + +  +  NP     A   I L  M G   S  E   PGL      QG  G++G  G
Sbjct: 1068 RGPKGEEGSGGNP----GAPGPIGLQGMPGPSGSKGETGDPGLTGAPGPQGNPGKRGSTG 1123

Query: 126  AKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY------------PG 170
            ++G  G  G RG+ GA G+ G    PGP G  G +G RG KGD G             PG
Sbjct: 1124 SQGIQGQPGPRGDNGAGGLKGDKGDPGPNGRTGRDGPRGFKGDSGVKGEPGSTGLPGNPG 1183

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGL---DGIPGRNGMDGIPGKDG 224
            P+GI G  G +G +G +G+PG +GL G +G+PG   EPG    DG PG  GM GI G  G
Sbjct: 1184 PRGIEGPSGPKGNQGPLGFPGELGLPGPEGVPGTIGEPGQSGSDGDPGPIGMQGISGDPG 1243

Query: 225  LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             PG  G PGT G+ G  G  GP+G+ G+ G  G+ G P 
Sbjct: 1244 RPGPRGRPGTPGSQGPSGREGPKGDPGEDGPPGLRGDPG 1282



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/138 (44%), Positives = 71/138 (51%), Gaps = 3/138 (2%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP+G  G  G  G  GV+G  G+ G PGV G  GP G PG +G+ G KG MG PG
Sbjct: 581 PMGKHGPVGAMGPQGQSGPPGVQGPVGKPGIPGVPGTDGPAGHPGQDGQSGAKGSMGAPG 640

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
             G+ G  G  G KG  G  G  G  G  G+ G PG     G  GM G  G+ G+PG  G
Sbjct: 641 SIGVSGYTGPMGVKGARGIFGNSGQKGNSGMDGLPGFK---GELGMKGERGQLGVPGPRG 697

Query: 231 IPGTNGTNGEKGMTGPRG 248
             G  G  GE+GM G  G
Sbjct: 698 SEGIGGPKGEQGMPGEAG 715



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 86/210 (40%), Gaps = 60/210 (28%)

Query: 115  QGPIGQKGEIGAKGEMG---------------------------VKGERGEKGAPGV--- 144
            QGPIG  GE G  GE G                            +GERG+ G  G+   
Sbjct: 969  QGPIGPSGERGDAGEEGSMGPAGRDGMPGPRGPPGPIGQPGPQGPEGERGDSGPIGIKGT 1028

Query: 145  ---------------------VGPP---GPQGIPGDEGKRGPKGDM------GYPGPQGI 174
                                  GPP   G QGIPG  G RGPKG+       G PGP G+
Sbjct: 1029 KGERGEGGPPGPPGERGPLGESGPPGDDGEQGIPGQSGPRGPKGEEGSGGNPGAPGPIGL 1088

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
             G  G  G KG+ G PG  G  G  G PG+ G  G  G  G  G  G +G  G  G  G 
Sbjct: 1089 QGMPGPSGSKGETGDPGLTGAPGPQGNPGKRGSTGSQGIQGQPGPRGDNGAGGLKGDKGD 1148

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G NG  G  GPRG +G SG+ G PG+  +
Sbjct: 1149 PGPNGRTGRDGPRGFKGDSGVKGEPGSTGL 1178



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 102/241 (42%), Gaps = 58/241 (24%)

Query: 105 STKEYCPPGLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGPQGIPG 155
           S  ++ P G  G  GQ G  G +G  G         + GE+G++G  G+ G PG +G  G
Sbjct: 464 SLGDFGPRGPSGTPGQPGRSGKRGRPGKDGGRGPAGIGGEKGDRGYDGLPGLPGVKGTFG 523

Query: 156 DEGK------------RGPKGDMGYPGPQGI------------------------PGDEG 179
           +EG             RG  G  G  GPQGI                        PG  G
Sbjct: 524 EEGPYGDPGPSGPPGIRGAPGSRGPAGPQGISGLEGEPGGPGPKGPVGLPGVAGGPGPMG 583

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           K GP G MG  G+ G  G  G  G+PG+ G+PG +G  G PG+DG  G  G  G  G+ G
Sbjct: 584 KHGPVGAMGPQGQSGPPGVQGPVGKPGIPGVPGTDGPAGHPGQDGQSGAKGSMGAPGSIG 643

Query: 240 EKGMTGP------------RGNRGKSGINGVPGTPAICAYKRESCSL-LPNSETSQLLIP 286
             G TGP             G +G SG++G+PG       K E   L +P    S+ +  
Sbjct: 644 VSGYTGPMGVKGARGIFGNSGQKGNSGMDGLPGFKGELGMKGERGQLGVPGPRGSEGIGG 703

Query: 287 P 287
           P
Sbjct: 704 P 704



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 86/188 (45%), Gaps = 45/188 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG-------------- 158
           G+ G  G KGE+G KGE G  G  G +G+ G+ GP G QG+PG+ G              
Sbjct: 670 GMDGLPGFKGELGMKGERGQLGVPGPRGSEGIGGPKGEQGMPGEAGPIGTYGDQGPPGPP 729

Query: 159 -------KRGPKGDMGYPGPQGIPGDEGKRGP---------------------KGDMGYP 190
                    G KG++G+ G +G  G +G RGP                     +G  G P
Sbjct: 730 GIPGYPGNVGEKGELGHSGKRGRSGRKGSRGPSGMRGPIGPGGPMGGPGSRGPQGIQGVP 789

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  G  G  G PG  G  G PG+ G  G     G +G PG+DG+PG  G+ GE GM G  
Sbjct: 790 GEYGEQGERGPPGPVGDQGPPGQQGPRGFAGGKGPNGPPGQDGMPGFPGSRGESGMDGES 849

Query: 248 GNRGKSGI 255
           G  G +G+
Sbjct: 850 GTPGPAGV 857



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 91/228 (39%), Gaps = 78/228 (34%)

Query: 111  PPGLQGPIGQK---GEIGAKGEMGVKGERGEKGAP------------------------- 142
            PPG+QGP G +   GE G +GE G++G +GE G P                         
Sbjct: 905  PPGIQGPEGARGFSGERGLRGEQGIEGMKGEDGPPGQSGPPGVQGQLGPPGPPGGVGLPG 964

Query: 143  -----GVVGPPGPQGIPGDEGKRGP------------------------KGDMGYPGPQG 173
                 G +GP G +G  G+EG  GP                        +G+ G  GP G
Sbjct: 965  RPGDQGPIGPSGERGDAGEEGSMGPAGRDGMPGPRGPPGPIGQPGPQGPEGERGDSGPIG 1024

Query: 174  IPGDE------------------GKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPG 212
            I G +                  G+ GP GD    G PG+ G  G  G  G  G  G PG
Sbjct: 1025 IKGTKGERGEGGPPGPPGERGPLGESGPPGDDGEQGIPGQSGPRGPKGEEGSGGNPGAPG 1084

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G+ G+PG  G  G+ G PG  G  G +G  G RG+ G  GI G PG
Sbjct: 1085 PIGLQGMPGPSGSKGETGDPGLTGAPGPQGNPGKRGSTGSQGIQGQPG 1132



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 86/201 (42%), Gaps = 57/201 (28%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPP---------------------GPQGIPGDEGKRGP 162
           +G KGE+G  G+RG  G  G  GP                      G QG+PG+ G+   
Sbjct: 738 VGEKGELGHSGKRGRSGRKGSRGPSGMRGPIGPGGPMGGPGSRGPQGIQGVPGEYGE--- 794

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG- 221
           +G+ G PGP G  G  G++GP+G  G  G  G  G+DG+PG PG  G  G +G  G PG 
Sbjct: 795 QGERGPPGPVGDQGPPGQQGPRGFAGGKGPNGPPGQDGMPGFPGSRGESGMDGESGTPGP 854

Query: 222 -----------------------------KDGLPGKDGIPGTNGTNGE---KGMTGPRGN 249
                                        + GLPG DG+ G  G +G     G+ GP G 
Sbjct: 855 AGVIGPQGPPGEPGSSGPTGFPGPPGSPGEAGLPGNDGLTGPQGVSGPVGPPGIQGPEGA 914

Query: 250 RGKSGINGVPGTPAICAYKRE 270
           RG SG  G+ G   I   K E
Sbjct: 915 RGFSGERGLRGEQGIEGMKGE 935



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 87/231 (37%), Gaps = 81/231 (35%)

Query: 111 PPGLQGPIGQKGEIGA---------------------KGEMGVKGERGEKGAPGVVGPP- 148
           P G QG  G+ G IG                      KGE+G  G+RG  G  G  GP  
Sbjct: 704 PKGEQGMPGEAGPIGTYGDQGPPGPPGIPGYPGNVGEKGELGHSGKRGRSGRKGSRGPSG 763

Query: 149 --------------------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------ 182
                               G QG+PG+ G++G +G  G  G QG PG +G RG      
Sbjct: 764 MRGPIGPGGPMGGPGSRGPQGIQGVPGEYGEQGERGPPGPVGDQGPPGQQGPRGFAGGKG 823

Query: 183 ------PKGDMGYPGRIGLDGRDGLPGEPGLDGI-------------------------- 210
                   G  G+PG  G  G DG  G PG  G+                          
Sbjct: 824 PNGPPGQDGMPGFPGSRGESGMDGESGTPGPAGVIGPQGPPGEPGSSGPTGFPGPPGSPG 883

Query: 211 -PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G DG+ G  G+ G  G PG  G  G +G +G RG RG+ GI G+ G
Sbjct: 884 EAGLPGNDGLTGPQGVSGPVGPPGIQGPEGARGFSGERGLRGEQGIEGMKG 934



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 77/193 (39%), Gaps = 66/193 (34%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGIPGDEG-------- 158
           G +G  G  G  G KGE+G+KGERG+ G PG      + GP G QG+PG+ G        
Sbjct: 664 GQKGNSGMDGLPGFKGELGMKGERGQLGVPGPRGSEGIGGPKGEQGMPGEAGPIGTYGDQ 723

Query: 159 -------------KRGPKGDMGYPGPQGIPGDEGKRGP---------------------K 184
                          G KG++G+ G +G  G +G RGP                     +
Sbjct: 724 GPPGPPGIPGYPGNVGEKGELGHSGKRGRSGRKGSRGPSGMRGPIGPGGPMGGPGSRGPQ 783

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGR------------------NGMDGIPGKDGLP 226
           G  G PG  G  G  G PG  G  G PG+                  +GM G PG  G  
Sbjct: 784 GIQGVPGEYGEQGERGPPGPVGDQGPPGQQGPRGFAGGKGPNGPPGQDGMPGFPGSRGES 843

Query: 227 GKDGIPGTNGTNG 239
           G DG  GT G  G
Sbjct: 844 GMDGESGTPGPAG 856



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 82/222 (36%), Gaps = 75/222 (33%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGD----------- 156
            P G QGP+G  GE+G  G  GV G  GE G  G  G PGP   QGI GD           
Sbjct: 1193 PKGNQGPLGFPGELGLPGPEGVPGTIGEPGQSGSDGDPGPIGMQGISGDPGRPGPRGRPG 1252

Query: 157  -------EGKRGPKGDMGYPGPQGIPGDEGK----------------------------- 180
                    G+ GPKGD G  GP G+ GD G                              
Sbjct: 1253 TPGSQGPSGREGPKGDPGEDGPPGLRGDPGPSGDNGPQGPQGPPGLRGLPGPEGNPGEPG 1312

Query: 181  -------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
                         +GP G  G PG +G  G  G  G  G  GI G  G  G  G+ G  G
Sbjct: 1313 PPGAPGAQGQVGIQGPTGAQGDPGPLGPKGDRGFLGRTGEVGIMGEKGDKGSQGEGGPQG 1372

Query: 228  KDGIPGTNGTNG------------EKGMTGPRGNRGKSGING 257
              G PG+ G  G              G++G +G RG  G+ G
Sbjct: 1373 PKGDPGSEGPRGVMGPEGPPGLPGRDGLSGAKGERGDFGVVG 1414



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 99/268 (36%), Gaps = 108/268 (40%)

Query: 101 GFCNSTKEYCPPGLQGPIG------------------QKGEIGAKGEMG----------- 131
           G      +  PPG+QGP+G                  Q G+ GAKG MG           
Sbjct: 589 GAMGPQGQSGPPGVQGPVGKPGIPGVPGTDGPAGHPGQDGQSGAKGSMGAPGSIGVSGYT 648

Query: 132 ----VKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGYPGPQGIPGDEGKRGPK 184
               VKG RG  G  G  G  G  G+PG +G+   +G +G +G PGP+G    EG  GPK
Sbjct: 649 GPMGVKGARGIFGNSGQKGNSGMDGLPGFKGELGMKGERGQLGVPGPRG---SEGIGGPK 705

Query: 185 GDMGYPGRIGLDG------------------RDGLPGEPGLDGIPGRN------------ 214
           G+ G PG  G  G                    G  GE G  G  GR+            
Sbjct: 706 GEQGMPGEAGPIGTYGDQGPPGPPGIPGYPGNVGEKGELGHSGKRGRSGRKGSRGPSGMR 765

Query: 215 ------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR--------- 247
                             G+ G+PG+ G  G+ G PG  G  G  G  GPR         
Sbjct: 766 GPIGPGGPMGGPGSRGPQGIQGVPGEYGEQGERGPPGPVGDQGPPGQQGPRGFAGGKGPN 825

Query: 248 ------------GNRGKSGINGVPGTPA 263
                       G+RG+SG++G  GTP 
Sbjct: 826 GPPGQDGMPGFPGSRGESGMDGESGTPG 853


>gi|350418536|ref|XP_003491889.1| PREDICTED: collagen alpha-1(IV) chain-like [Bombus impatiens]
          Length = 1941

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 100/177 (56%), Gaps = 31/177 (17%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            + +K Y  PG +G  G +G  G +G  G+KGERGEKGAPG  G  G +G PG  G  GPK
Sbjct: 1130 DGSKGY--PGRRGLPGLQGRPGIEGAPGLKGERGEKGAPGFPGLRGMEGKPGRPGLIGPK 1187

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGLDGI------P 211
            GD+G+PG  G+PG  G +GPKGD G PG  G  G  GL       GEPG+ GI      P
Sbjct: 1188 GDIGHPGLPGLPGTIGFQGPKGDQGLPGLPGRKGEPGLVSEKGQKGEPGMPGIRGPVGPP 1247

Query: 212  GRNGMD-----------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            GR+G+D                 G+ G+ GLPG+DG+PG  G  G+ G+ G  G++G
Sbjct: 1248 GRDGIDGDKGERGLSCNCLDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVRGFHGSQG 1304



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/191 (40%), Positives = 103/191 (53%), Gaps = 17/191 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMG-------VKGERGEKGAPGVVGPPGPQGIPGDEGKRG--- 161
            PGL G  G +G  G KG+ G       +KGE+GE G PG+ G  G +G  G+EG  G   
Sbjct: 1363 PGLVGESGIRGMPGEKGDRGQPGPTVAIKGEKGEPGMPGLRGVAGEKGDRGEEGLAGYDG 1422

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             KGD G PGP G PG  G  GPKG+ G  G  G+ G   + GE GL G+PG++G +G+PG
Sbjct: 1423 EKGDRGTPGPVGNPGSPGLPGPKGEEGPRGPTGIAGLT-IKGEKGLPGLPGKHGREGVPG 1481

Query: 222  KDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTP---AICAYKRESCSLL 275
            + G  G+ G+PG  G  G++   G  GP+G +G  G+ G PG P       ++  S  + 
Sbjct: 1482 RPGEKGERGLPGLPGHKGDQGPYGPVGPQGEKGDMGLMGAPGLPGQDGAPGHRGLSGQIG 1541

Query: 276  PNSETSQLLIP 286
            P  E     IP
Sbjct: 1542 PKGEKGDNCIP 1552



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 99/181 (54%), Gaps = 9/181 (4%)

Query: 95   PLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            P VA++G      E   PGL+G  G+KG+ G +G  G  GE+G++G PG VG PG  G+P
Sbjct: 1386 PTVAIKG---EKGEPGMPGLRGVAGEKGDRGEEGLAGYDGEKGDRGTPGPVGNPGSPGLP 1442

Query: 155  GDEGKRGPKGDMGYP-----GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            G +G+ GP+G  G       G +G+PG  GK G +G  G PG  G  G  GLPG  G  G
Sbjct: 1443 GPKGEEGPRGPTGIAGLTIKGEKGLPGLPGKHGREGVPGRPGEKGERGLPGLPGHKGDQG 1502

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
              G  G  G  G  GL G  G+PG +G  G +G++G  G +G+ G N +P  P +   K 
Sbjct: 1503 PYGPVGPQGEKGDMGLMGAPGLPGQDGAPGHRGLSGQIGPKGEKGDNCIP-EPGLPGQKG 1561

Query: 270  E 270
            E
Sbjct: 1562 E 1562



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 112/234 (47%), Gaps = 53/234 (22%)

Query: 87  WLNAYSRIPLVAMQGFCNSTKEYC-------------PPGL---QGPIGQKGEIGAKGEM 130
           + ++Y+ +P+   +   N T   C             PPG+   QGP GQKG  G +G +
Sbjct: 210 YPSSYTVVPVPGYKPQRNCTGSACCVPKCFAEKGSRGPPGVMGPQGPKGQKGFPGTEGLL 269

Query: 131 GVKGERGEKGAPGVVGPPGPQG---IPGDEG------------------KRGPKGDMGYP 169
           G KGE+G+ G  G+ GP G +G   IPG  G                  + G  G  G P
Sbjct: 270 GPKGEKGDPGPQGLRGPKGDRGKMGIPGFSGISGVPGVQGPPGAPGLPGRDGCNGTDGEP 329

Query: 170 GPQGIPGDEGKRG---PKGDMGYPGRIGLDGR--DGLPGEPGLDGIPGRNGMDGIPGKDG 224
           GP G PGD G RG   P+G  G  G+ G  GR   G  GEPG+DG+ G  G  G+ G+ G
Sbjct: 330 GPAGRPGDTGPRGYPGPRGPKGDKGQSGFAGRFPVGQKGEPGIDGVRGPPGQPGLQGERG 389

Query: 225 LPGKDG------IPGTNGTNGEKG-----MTGPRGNRGKSGINGVPGTPAICAY 267
            PG  G       PG  G  GEKG       GP+G++G+ G  G PG+PA+  +
Sbjct: 390 FPGPKGDRGPYGPPGLQGPRGEKGNMGLAFEGPKGDKGQKGEQGPPGSPAVGGF 443



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 89/180 (49%), Gaps = 15/180 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G+ G  G  G  G+ GE+G++G PG+ GPPG  G  G+ G  GP G MG  G 
Sbjct: 1554 PGLPGQKGEPGYPGVSGIDGLPGEKGDRGWPGLEGPPGLDGEKGERGFPGPMGKMGAIGF 1613

Query: 172  QGIPGDEG------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G  GD+G        GPKGD GYPG  G  G  G  G  G  G PG +GM G PG  G 
Sbjct: 1614 VGQKGDKGLDCLEPPMGPKGDRGYPGLTGPPGSPGEKGASGQPGFPGSHGMKGAPGPQGP 1673

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI 285
             G  G+PG  G  G  G+ G +G  G  G  G PG P         C   P+  T  LL+
Sbjct: 1674 SGPVGLPGLQGPVGAPGLPGLQGPVGHPGEPGEPGLP---------CEAAPDYLTGILLV 1724



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 84/159 (52%), Gaps = 35/159 (22%)

Query: 135 ERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           E+G +G PGV+GP GP+G    PG EG  GPKG+ G PGPQG+      RGPKGD    G
Sbjct: 241 EKGSRGPPGVMGPQGPKGQKGFPGTEGLLGPKGEKGDPGPQGL------RGPKGDR---G 291

Query: 192 RIGLDGRDGLPGEPGL------------DGIPGRNGMDGIPGKDGLP---GKDGIPGTNG 236
           ++G+ G  G+ G PG+            DG    NG DG PG  G P   G  G PG  G
Sbjct: 292 KMGIPGFSGISGVPGVQGPPGAPGLPGRDGC---NGTDGEPGPAGRPGDTGPRGYPGPRG 348

Query: 237 TNGEKGMTG-----PRGNRGKSGINGVPGTPAICAYKRE 270
             G+KG +G     P G +G+ GI+GV G P     + E
Sbjct: 349 PKGDKGQSGFAGRFPVGQKGEPGIDGVRGPPGQPGLQGE 387



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/147 (44%), Positives = 82/147 (55%), Gaps = 23/147 (15%)

Query: 109 YCPPGLQGPIGQKGEIG-----AKGEMGVKGERGEKGAPGVVG--PPGPQGIPGDEGKRG 161
           Y PPGLQGP G+KG +G      KG+ G KGE+G  G+P V G   PG + I G +G+RG
Sbjct: 400 YGPPGLQGPRGEKGNMGLAFEGPKGDKGQKGEQGPPGSPAVGGFLHPGEE-IAGPQGERG 458

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG------------ 209
            KGD G    +G  G +G++GP GD G PG  G+ G  GLPG PG+ G            
Sbjct: 459 EKGDTGE---RGSDGQKGEQGPIGDHGIPGTAGMKGEKGLPGAPGIRGRDGFSGPPGPPG 515

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNG 236
             G  G DG+ G  G PG+ G PG +G
Sbjct: 516 RKGDRGYDGLDGLSGRPGQKGEPGRDG 542



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 83/155 (53%), Gaps = 37/155 (23%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGP---------------QGIPGDEGKR--GPKGD 186
           + G PGP+G+PG++G +G  G  G+PGP               +G+PG++G    GPKG 
Sbjct: 604 LAGIPGPEGLPGEKGAKGEPGITGFPGPTGPRGFDGPPGLAGSRGLPGEKGASIMGPKGM 663

Query: 187 MGYPGRIGLDGRD---------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            G PGR G  G+          G+PG+  +DGIPG  G  G+PG+ G PGK+GIPG  G+
Sbjct: 664 DGAPGRDGEKGQKGERGYAGPRGVPGD--VDGIPGAPGEPGLPGEPGTPGKNGIPGFPGS 721

Query: 238 NGEKGMTGPR---------GNRGKSGINGVPGTPA 263
            GEKG  G R         G +G  G +G PG P 
Sbjct: 722 PGEKGEIGGRCIDCLPGLPGIKGDRGFDGQPGLPG 756



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 83/169 (49%), Gaps = 28/169 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G KG+ G  G   V G++GE G  GV GPPG  G+ G+ G  GPKGD    GP
Sbjct: 344 PGPRGPKGDKGQSGFAGRFPV-GQKGEPGIDGVRGPPGQPGLQGERGFPGPKGDR---GP 399

Query: 172 QGIPGDEGKRGPKGDMGYP-----GRIGLDGRDGLPGEPGLDGI---------------- 210
            G PG +G RG KG+MG       G  G  G  G PG P + G                 
Sbjct: 400 YGPPGLQGPRGEKGNMGLAFEGPKGDKGQKGEQGPPGSPAVGGFLHPGEEIAGPQGERGE 459

Query: 211 ---PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
               G  G DG  G+ G  G  GIPGT G  GEKG+ G  G RG+ G +
Sbjct: 460 KGDTGERGSDGQKGEQGPIGDHGIPGTAGMKGEKGLPGAPGIRGRDGFS 508



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 84/169 (49%), Gaps = 18/169 (10%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE------ 178
            G KGE G+ GE G+ G PG  G  G +G PG +G +G  G  G PG QG PG E      
Sbjct: 1098 GNKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSKGYPGRRGLPGLQGRPGIEGAPGLK 1157

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLP---------GEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G+RG KG  G+PG  G++G+ G P         G PGL G+PG  G  G  G  GLPG  
Sbjct: 1158 GERGEKGAPGFPGLRGMEGKPGRPGLIGPKGDIGHPGLPGLPGTIGFQGPKGDQGLPGLP 1217

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE---SCSLL 275
            G  G  G   EKG  G  G  G  G  G PG   I   K E   SC+ L
Sbjct: 1218 GRKGEPGLVSEKGQKGEPGMPGIRGPVGPPGRDGIDGDKGERGLSCNCL 1266



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 77/147 (52%), Gaps = 26/147 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G +G  G  G  G +G  GEKGA  ++GP G  G PG +G++G KG+ GY GP+
Sbjct: 627 GFPGPTGPRGFDGPPGLAGSRGLPGEKGAS-IMGPKGMDGAPGRDGEKGQKGERGYAGPR 685

Query: 173 GIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------LDGIPGRNGM 216
           G+PGD +G  G  G+ G PG  G  G++G+PG PG               L G+PG  G 
Sbjct: 686 GVPGDVDGIPGAPGEPGLPGEPGTPGKNGIPGFPGSPGEKGEIGGRCIDCLPGLPGIKGD 745

Query: 217 DGIPGKDGLPGKDGI---------PGT 234
            G  G+ GLPG  G          PG+
Sbjct: 746 RGFDGQPGLPGPRGPAGERGFPGEPGS 772



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 99/266 (37%), Gaps = 109/266 (40%)

Query: 108  EYCPPGLQGPIGQKGE---IGAKGE-----------MGVKGERGEKGAPGVVGPPGPQGI 153
            E+  PG +G  G KGE   +G KGE            G+KG+RG  G  G  GPPG  G+
Sbjct: 885  EHGEPGRRGETGAKGEPGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDGL 944

Query: 154  PGDEGKR------------------------GPKGDMGYPGPQGIPGDEGKRGP------ 183
             GD+G +                        GP+GD G  GP G PG+ G+ GP      
Sbjct: 945  SGDKGLQGISGPPGPPGSIGAPGPVGPRGLPGPRGDKGNIGPMGFPGESGREGPRGFPGA 1004

Query: 184  --------------------------KGDMGYPGRIGLDGRDGLPGEPGLDG-------- 209
                                      KG+ G PG  G +G DGLPG PG  G        
Sbjct: 1005 AGLKGAKGEVGISVKGSPGLPGPPGEKGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIP 1064

Query: 210  -------------------------------IPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                           I G  G  G+PG+ G PG  G PG  G  
Sbjct: 1065 GIGGLPGAPGEKGDTGPMGPPGPPGVAGIPGIDGNKGEPGLPGEAGKPGLPGFPGIKGDR 1124

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAI 264
            GE G+ G +G  G+ G+ G+ G P I
Sbjct: 1125 GEPGIDGSKGYPGRRGLPGLQGRPGI 1150



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 95/213 (44%), Gaps = 50/213 (23%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK-----------GERGEKGAPGVV 145
            +   GF   +    P G  G  G KG   AKGE+G+            GE+GEKG   + 
Sbjct: 984  IGPMGFPGESGREGPRGFPGAAGLKG---AKGEVGISVKGSPGLPGPPGEKGEKG---LP 1037

Query: 146  GPP---GPQGIPGDEGKRGPKGDM---------GYPGPQG------------------IP 175
            GPP   GP G+PG  G  G KGD          G PG +G                  I 
Sbjct: 1038 GPPGKEGPDGLPGLPGFSGEKGDAGIPGIGGLPGAPGEKGDTGPMGPPGPPGVAGIPGID 1097

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            G++G+ G  G+ G PG  G  G  G  GEPG+DG  G  G  G+PG  G PG +G PG  
Sbjct: 1098 GNKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSKGYPGRRGLPGLQGRPGIEGAPGLK 1157

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  GEKG  G  G R   G+ G PG P +   K
Sbjct: 1158 GERGEKGAPGFPGLR---GMEGKPGRPGLIGPK 1187



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/131 (42%), Positives = 67/131 (51%), Gaps = 13/131 (9%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQGIPGDEGKRGPKGDMGY 168
            PPGL G  G++G  G  G+MG  G  G+KG  G+  + PP            GPKGD GY
Sbjct: 1589 PPGLDGEKGERGFPGPMGKMGAIGFVGQKGDKGLDCLEPP-----------MGPKGDRGY 1637

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG  G PG  G++G  G  G+PG  G+ G  G  G  G  G+PG  G  G PG  GL G 
Sbjct: 1638 PGLTGPPGSPGEKGASGQPGFPGSHGMKGAPGPQGPSGPVGLPGLQGPVGAPGLPGLQGP 1697

Query: 229  DGIPGTNGTNG 239
             G PG  G  G
Sbjct: 1698 VGHPGEPGEPG 1708



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 91/218 (41%), Gaps = 51/218 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE-----------RGEKGAPGVVGPPGPQGIPGDEGKR 160
            PG++GP+G  G  G  G+ G +G            +GE G PG  G PGP G+ GD G R
Sbjct: 1238 PGIRGPVGPPGRDGIDGDKGERGLSCNCLDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVR 1297

Query: 161  GPKGDMG------------------------------------YPGPQGIPGDEGKRGPK 184
            G  G  G                                      G  G PG  G  G K
Sbjct: 1298 GFHGSQGDIGPMGPPGEPGTPGIDGLPGEPGDIGPPGPPGFPGLDGDVGAPGHPGLNGGK 1357

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRN-GMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            GD G PG +G  G  G+PGE G  G PG    + G  G+ G+PG  G+ G  G  GE+G+
Sbjct: 1358 GDRGLPGLVGESGIRGMPGEKGDRGQPGPTVAIKGEKGEPGMPGLRGVAGEKGDRGEEGL 1417

Query: 244  T---GPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
                G +G+RG  G  G PG+P +   K E     P  
Sbjct: 1418 AGYDGEKGDRGTPGPVGNPGSPGLPGPKGEEGPRGPTG 1455



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 81/200 (40%), Gaps = 50/200 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG--------------D 156
            P GL GP G KG IG  G  G  G  G +G PG  G  G +G  G              +
Sbjct: 971  PRGLPGPRGDKGNIGPMGFPGESGREGPRGFPGAAGLKGAKGEVGISVKGSPGLPGPPGE 1030

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM----------------------------- 187
            +G++G  G  G  GP G+PG  G  G KGD                              
Sbjct: 1031 KGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIPGIGGLPGAPGEKGDTGPMGPPGPPGV 1090

Query: 188  -------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                   G  G  GL G  G PG PG  GI G  G  GI G  G PG+ G+PG  G  G 
Sbjct: 1091 AGIPGIDGNKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSKGYPGRRGLPGLQGRPGI 1150

Query: 241  KGMTGPRGNRGKSGINGVPG 260
            +G  G +G RG+ G  G PG
Sbjct: 1151 EGAPGLKGERGEKGAPGFPG 1170



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 89/219 (40%), Gaps = 89/219 (40%)

Query: 112 PGLQGPIGQKGEIGAK------GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG  G  G+KGEIG +      G  G+KG+RG  G PG+ GP            RGP G+
Sbjct: 716 PGFPGSPGEKGEIGGRCIDCLPGLPGIKGDRGFDGQPGLPGP------------RGPAGE 763

Query: 166 MGYP---------------------------GPQGIP---------------GDEGKRGP 183
            G+P                           GPQG P               GD+G RGP
Sbjct: 764 RGFPGEPGSDGLPGPIGPPGPPGKDGIPGAAGPQGEPGIPAVVTENMLKVEKGDKGVRGP 823

Query: 184 KGD------------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G                    G+PG  G+ G  G PG+   DGIPGR     +PG+ G 
Sbjct: 824 VGRDGPPGLPGPPGEKGPMGFEGFPGPKGVAGDRGFPGQ---DGIPGR---PCVPGRKGE 877

Query: 226 P-----GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           P     G+ G PG  G  G KG  GP G++G+ G+  +P
Sbjct: 878 PGVSVKGEHGEPGRRGETGAKGEPGPLGDKGEPGLCPIP 916



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 80/187 (42%), Gaps = 55/187 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE-----------KGAPGVVGPPGPQGIPGDEGKRG 161
            G  G  G++GE GAKGE G  G++GE           KG  G  G PG +G PG  G+ G
Sbjct: 884  GEHGEPGRRGETGAKGEPGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDG 943

Query: 162  PKGDMGYP------------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
              GD G                    GP+G+PG  G +G  G MG+PG  G +G  G PG
Sbjct: 944  LSGDKGLQGISGPPGPPGSIGAPGPVGPRGLPGPRGDKGNIGPMGFPGESGREGPRGFPG 1003

Query: 204  EPGLDGIPGRNGMD-----------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
              GL G  G  G+                  G+PG  G  G DG+PG  G +GEKG    
Sbjct: 1004 AAGLKGAKGEVGISVKGSPGLPGPPGEKGEKGLPGPPGKEGPDGLPGLPGFSGEKG---- 1059

Query: 247  RGNRGKS 253
                  +
Sbjct: 1060 -----DA 1061



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 54/108 (50%), Gaps = 16/108 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE-------RGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           PG  G  GQKGE G  G  GV G+        GE G PG  G PG  GIPG  G  G KG
Sbjct: 667 PGRDGEKGQKGERGYAGPRGVPGDVDGIPGAPGEPGLPGEPGTPGKNGIPGFPGSPGEKG 726

Query: 165 DMG------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           ++G       P   G+PG +G RG  G  G PG  G  G  G PGEPG
Sbjct: 727 EIGGRCIDCLP---GLPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPG 771



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 86/209 (41%), Gaps = 62/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGER---GEKGAPGVV-----GPPGPQGIPGDEGKRGPKG 164
            G  GP G  G+ G  G+ G+ G     G KG PGV      G PG +G  G +G+ GP G
Sbjct: 846  GFPGPKGVAGDRGFPGQDGIPGRPCVPGRKGEPGVSVKGEHGEPGRRGETGAKGEPGPLG 905

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLD------------- 208
            D G PG   IP DE  +G KGD G PG     G  GRDGL G+ GL              
Sbjct: 906  DKGEPGLCPIP-DELIKGIKGDRGAPGEKGEPGPPGRDGLSGDKGLQGISGPPGPPGSIG 964

Query: 209  --------GIPGRNGMD------GIPGKDGLPGKDGIPGTNG------------------ 236
                    G+PG  G        G PG+ G  G  G PG  G                  
Sbjct: 965  APGPVGPRGLPGPRGDKGNIGPMGFPGESGREGPRGFPGAAGLKGAKGEVGISVKGSPGL 1024

Query: 237  -----TNGEKGMTGPRGNRGKSGINGVPG 260
                   GEKG+ GP G  G  G+ G+PG
Sbjct: 1025 PGPPGEKGEKGLPGPPGKEGPDGLPGLPG 1053



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 84/216 (38%), Gaps = 72/216 (33%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------------------VV 145
           C PGL G  G +G  G  G  G +G  GE+G PG                          
Sbjct: 735 CLPGLPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPGSDGLPGPIGPPGPPGKDGIPGAA 794

Query: 146 GPPGPQGIP------------GDEGKRGPKGD------------------MGYPGPQGIP 175
           GP G  GIP            GD+G RGP G                    G+PGP+G+ 
Sbjct: 795 GPQGEPGIPAVVTENMLKVEKGDKGVRGPVGRDGPPGLPGPPGEKGPMGFEGFPGPKGV- 853

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                    GD G+PG+ G+ GR  +PG  G  G+    G  G PG+ G  G  G PG  
Sbjct: 854 --------AGDRGFPGQDGIPGRPCVPGRKGEPGVS-VKGEHGEPGRRGETGAKGEPGPL 904

Query: 236 GTNGEKGM--------TGPRGNRGKSGINGVPGTPA 263
           G  GE G+         G +G+RG  G  G PG P 
Sbjct: 905 GDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPG 940


>gi|254028223|ref|NP_001156766.1| collagen alpha-1(XXVII) chain A precursor [Danio rerio]
 gi|302595675|sp|C7DZK3.1|CRA1A_DANRE RecName: Full=Collagen alpha-1(XXVII) chain A; Flags: Precursor
 gi|253326824|gb|ACT31326.1| procollagen type XXVII alpha I a [Danio rerio]
          Length = 1783

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 93/192 (48%), Gaps = 39/192 (20%)

Query: 112  PGLQGPIGQKGEIGAKG------EMGVKGERGEKGAPGVVGPPGPQ-------------- 151
            PGL+GP+G++G+ G  G      + GV G RG+ GAPG+ G PGP+              
Sbjct: 1274 PGLRGPVGKRGDRGEPGDPGYVGQQGVDGLRGKPGAPGLPGDPGPRGTQGPKGSKGEQGQ 1333

Query: 152  -------------------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                               G+PG  G  G +G  G+PG  G+ G +G RG  GD G  G 
Sbjct: 1334 KGKQGQQGERGSRGSPGVVGLPGPRGTVGREGREGFPGTDGLAGKDGSRGTPGDQGDDGE 1393

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             GL G+ G PG+ G+ G+PG  G  G  G+ GLPG  G  G  G  G  G+ GP+G+RG 
Sbjct: 1394 FGLPGKPGAPGKVGVIGLPGPQGSFGPKGERGLPGHPGPSGKRGFKGGMGLPGPQGDRGS 1453

Query: 253  SGINGVPGTPAI 264
             G  G  G P  
Sbjct: 1454 KGQPGDIGEPGF 1465



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 86/158 (54%), Gaps = 12/158 (7%)

Query: 115 QGPIGQKGEIGAKGEMGVK---GERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
           QGP+G+ G  G  G  G+    G  G KGA G +G PG  G+PG +G+R   GP G  G 
Sbjct: 655 QGPVGEAGAKGYPGRQGLPGPIGPVGPKGARGFIGIPGLFGLPGADGERGSPGPPGKRGK 714

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGLDGIPGRNGMDGIPGK 222
            G  G PGD G+RGP G  G PG IG  G  G+       G  G  G+PG NG+ G+PG 
Sbjct: 715 MGRPGFPGDFGERGPPGLDGEPGVIGAPGPPGVLGLIGDMGPAGTVGVPGLNGLKGVPGN 774

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G  G  GE+G  G +G++G  G+ G+PG
Sbjct: 775 MGESGLKGDKGDVGLPGEQGEIGFQGDKGVQGLPGLPG 812



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 87/187 (46%), Gaps = 27/187 (14%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIP 154
             +GF      +  PG  G  G  G  G +G+MG     G+ GE+G PG+ G PG  G P
Sbjct: 683 GARGFIGIPGLFGLPGADGERGSPGPPGKRGKMGRPGFPGDFGERGPPGLDGEPGVIGAP 742

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G  G  GDMG  G  G+PG  G +G  G+MG  G  G  G  GLPGE G  G  G  
Sbjct: 743 GPPGVLGLIGDMGPAGTVGVPGLNGLKGVPGNMGESGLKGDKGDVGLPGEQGEIGFQGDK 802

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGE---------------------KGMTGPRGNRGKS 253
           G+ G+PG   LPG  G PG  G  GE                      G+ GP G +GK 
Sbjct: 803 GVQGLPG---LPGPRGKPGPQGKTGEIGPSGLPGPPGPEGFPGDIGKPGLNGPEGPKGKP 859

Query: 254 GINGVPG 260
           G  G+PG
Sbjct: 860 GARGLPG 866



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/156 (42%), Positives = 83/156 (53%), Gaps = 15/156 (9%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGDEGKR 160
            G  G  G  G+ G  GE G+ G+ G  G  GV+G PGPQG             PG  GKR
Sbjct: 1377 GKDGSRGTPGDQGDDGEFGLPGKPGAPGKVGVIGLPGPQGSFGPKGERGLPGHPGPSGKR 1436

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G KG MG PGPQG  G +G+ G  G+ G+PG +G+ G  G PG+ G  GI G  G  G  
Sbjct: 1437 GFKGGMGLPGPQGDRGSKGQPGDIGEPGFPGMLGMFGPKGPPGDFGPKGIQGPKGPQGNM 1496

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G+ GL G  G+ G  G  G +G T   GN+G+ G+ 
Sbjct: 1497 GRGGLAGPVGVIGPIGNPGSRGDT---GNKGELGVQ 1529



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 81/154 (52%), Gaps = 12/154 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GPIG  G  GA+G +G+ G         ERG  G PG  G  G  G PGD G+RGP 
Sbjct: 671 GLPGPIGPVGPKGARGFIGIPGLFGLPGADGERGSPGPPGKRGKMGRPGFPGDFGERGPP 730

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG  G PG  G  G  GDMG  G +G+ G +GL G PG     G +G+ G  G  
Sbjct: 731 GLDGEPGVIGAPGPPGVLGLIGDMGPAGTVGVPGLNGLKGVPGNM---GESGLKGDKGDV 787

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GLPG+ G  G  G  G +G+ G  G RGK G  G
Sbjct: 788 GLPGEQGEIGFQGDKGVQGLPGLPGPRGKPGPQG 821



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 79/172 (45%), Gaps = 33/172 (19%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK--------------------- 163
           G KG+ G+   +  KG  G VG PGP G+ G EG++G K                     
Sbjct: 602 GKKGDPGLSPGKAPKGDKGDVGLPGPVGLVGVEGRKGQKGHPGPPGLPGEPGEQGPVGEA 661

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPG---------LDGIP 211
           G  GYPG QG+PG  G  GPKG  G+   PG  GL G DG  G PG           G P
Sbjct: 662 GAKGYPGRQGLPGPIGPVGPKGARGFIGIPGLFGLPGADGERGSPGPPGKRGKMGRPGFP 721

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G PG DG PG  G PG  G  G  G  GP G  G  G+NG+ G P 
Sbjct: 722 GDFGERGPPGLDGEPGVIGAPGPPGVLGLIGDMGPAGTVGVPGLNGLKGVPG 773



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 84/175 (48%), Gaps = 24/175 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---------------RGEKGAPGVVGPPGPQGIPGD 156
            PG +GP G+ G+ G  GE G KG                RGE G  G  GP GP      
Sbjct: 1075 PGPKGPAGKVGDSGLPGEPGEKGSIGLAGNAGAAGLIGARGEPGLEGEAGPAGP------ 1128

Query: 157  EGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            +G +G KGDMG  G QG+   PG +GK GP GD G  G  G +G+ G  GE G  G+ G 
Sbjct: 1129 DGTKGEKGDMGTEGEQGVRGDPGIKGKDGPPGDPGLTGVRGPEGKSGKSGERGKPGLKGA 1188

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G  G+ G  GK G  GT G  G +G  G  G  G+ G+ G PG      +K
Sbjct: 1189 KGNIGHLGETGSVGKIGPIGTTGPKGSRGTIGHAGAPGRMGLQGDPGISGYEGHK 1243



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 78/157 (49%), Gaps = 27/157 (17%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G  G +G +G +G+RGE G PG VG    QG+ G  GK         PG  G+PGD 
Sbjct: 1269 GPTGAPGLRGPVGKRGDRGEPGDPGYVGQ---QGVDGLRGK---------PGAPGLPGDP 1316

Query: 179  GKRGPKGDMGYPGRI------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G RG +G  G  G              G  G  G+ G PG  G  GR G +G PG DGL 
Sbjct: 1317 GPRGTQGPKGSKGEQGQKGKQGQQGERGSRGSPGVVGLPGPRGTVGREGREGFPGTDGLA 1376

Query: 227  GKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GKD   G PG  G +GE G+ G  G  GK G+ G+PG
Sbjct: 1377 GKDGSRGTPGDQGDDGEFGLPGKPGAPGKVGVIGLPG 1413



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 94/217 (43%), Gaps = 60/217 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------GPPGP--- 150
            PG  G IG+ GE+G KG  G++G  G  G  G+                   GP GP   
Sbjct: 1024 PGHAGKIGESGEVGPKGFPGIQGPSGATGDKGIAGEPGPSGPPGTLGPQGNPGPKGPAGK 1083

Query: 151  ---QGIPGDEGKRGP---------------------KGDMGYPGPQGIPGDEGKRGPKGD 186
                G+PG+ G++G                      +G+ G  GP G  G++G  G +G+
Sbjct: 1084 VGDSGLPGEPGEKGSIGLAGNAGAAGLIGARGEPGLEGEAGPAGPDGTKGEKGDMGTEGE 1143

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK----- 241
             G  G  G+ G+DG PG+PGL G+ G  G  G  G+ G PG  G  G  G  GE      
Sbjct: 1144 QGVRGDPGIKGKDGPPGDPGLTGVRGPEGKSGKSGERGKPGLKGAKGNIGHLGETGSVGK 1203

Query: 242  ----GMTGPRGNRGKSGINGVPGT------PAICAYK 268
                G TGP+G+RG  G  G PG       P I  Y+
Sbjct: 1204 IGPIGTTGPKGSRGTIGHAGAPGRMGLQGDPGISGYE 1240



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 86/191 (45%), Gaps = 34/191 (17%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E  P G  G  G+KG++G +GE GV+G+ G KG  G  G PG  G+ G EGK G  G+ G
Sbjct: 1122 EAGPAGPDGTKGEKGDMGTEGEQGVRGDPGIKGKDGPPGDPGLTGVRGPEGKSGKSGERG 1181

Query: 168  YPGPQGIPGDEGK---------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDG--- 209
             PG +G  G+ G                 GPKG  G  G  G  GR GL G+PG+ G   
Sbjct: 1182 KPGLKGAKGNIGHLGETGSVGKIGPIGTTGPKGSRGTIGHAGAPGRMGLQGDPGISGYEG 1241

Query: 210  ---------------IPGRNGMDG-IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                             G  G DG + G  G PG  G  G  G  GE G  G  G +G  
Sbjct: 1242 HKGPQGPIGPPGPKGAKGEQGDDGKVEGPTGAPGLRGPVGKRGDRGEPGDPGYVGQQGVD 1301

Query: 254  GINGVPGTPAI 264
            G+ G PG P +
Sbjct: 1302 GLRGKPGAPGL 1312



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 82/169 (48%), Gaps = 33/169 (19%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK--------------- 163
           G+KG+ G       KG++G+      VG PGP G+ G EG++G K               
Sbjct: 602 GKKGDPGLSPGKAPKGDKGD------VGLPGPVGLVGVEGRKGQKGHPGPPGLPGEPGEQ 655

Query: 164 ------GDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRN 214
                 G  GYPG QG+PG  G  GPKG  G+   PG  GL G DG  G PG  G  G+ 
Sbjct: 656 GPVGEAGAKGYPGRQGLPGPIGPVGPKGARGFIGIPGLFGLPGADGERGSPGPPGKRGKM 715

Query: 215 GMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G P   G+ G PG DG PG  G  G  G+ G  G+ G +G  GVPG
Sbjct: 716 GRPGFPGDFGERGPPGLDGEPGVIGAPGPPGVLGLIGDMGPAGTVGVPG 764



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 95/206 (46%), Gaps = 63/206 (30%)

Query: 121  KGEIGAK---GEMGVKGERGEKGAPGVVGPPGPQGI-----PGDE----GKRGPKGDMGY 168
            +G++G+K   G +G++G +GE+G  G  GP G +G+     PG E    G++G +G+MG 
Sbjct: 889  EGQMGSKGFPGALGLEGVKGEQGVTGKAGPMGERGLVGFIGPGGEAGLAGEKGDRGEMGL 948

Query: 169  PGPQ---------------------------------GIPGDEGKRGPKGDMGYPGRIGL 195
            PGP                                  GI G +G+RGP+G  G PG IG 
Sbjct: 949  PGPPGEKGSTGHPGTPGEGGPPGPPGSPGSPGSRGPIGIRGPKGRRGPRGPDGVPGEIGT 1008

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT----------- 244
            +G+ G  G PG  G PG  G  G  G+ G  G  GI G +G  G+KG+            
Sbjct: 1009 EGKKGPDGPPGKIGFPGHAGKIGESGEVGPKGFPGIQGPSGATGDKGIAGEPGPSGPPGT 1068

Query: 245  -------GPRGNRGKSGINGVPGTPA 263
                   GP+G  GK G +G+PG P 
Sbjct: 1069 LGPQGNPGPKGPAGKVGDSGLPGEPG 1094



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 90/211 (42%), Gaps = 57/211 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG---------------------ERGEKGAPGVVGPPGP 150
            PGL GP G KG+ GA+G  G +G                     + G KG PG +G  G 
Sbjct: 847  PGLNGPEGPKGKPGARGLPGPRGAAGREGDEGPLGPPGPFGLEGQMGSKGFPGALGLEGV 906

Query: 151  QGIPGDEGKRGPKGD---MGYPGPQGIPGDEGKRGPKGDMGYPG---------------- 191
            +G  G  GK GP G+   +G+ GP G  G  G++G +G+MG PG                
Sbjct: 907  KGEQGVTGKAGPMGERGLVGFIGPGGEAGLAGEKGDRGEMGLPGPPGEKGSTGHPGTPGE 966

Query: 192  -----------------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
                              IG+ G  G  G  G DG+PG  G +G  G DG PGK G PG 
Sbjct: 967  GGPPGPPGSPGSPGSRGPIGIRGPKGRRGPRGPDGVPGEIGTEGKKGPDGPPGKIGFPGH 1026

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
             G  GE G  GP+G  G  G +G  G   I 
Sbjct: 1027 AGKIGESGEVGPKGFPGIQGPSGATGDKGIA 1057



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 93/225 (41%), Gaps = 60/225 (26%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDE 157
           GF     E  PPGL G   + G IGA G  GV G  G+ G  G VG PG    +G+PG+ 
Sbjct: 719 GFPGDFGERGPPGLDG---EPGVIGAPGPPGVLGLIGDMGPAGTVGVPGLNGLKGVPGNM 775

Query: 158 GK---RGPKGDMGYPGPQ---------------GIPGDEGKRGPKGDMGY---------- 189
           G+   +G KGD+G PG Q               G+PG  GK GP+G  G           
Sbjct: 776 GESGLKGDKGDVGLPGEQGEIGFQGDKGVQGLPGLPGPRGKPGPQGKTGEIGPSGLPGPP 835

Query: 190 --------PGRIGLDGRDGLPGEPGLDGIPGRNGM------------------DGIPGKD 223
                    G+ GL+G +G  G+PG  G+PG  G                   +G  G  
Sbjct: 836 GPEGFPGDIGKPGLNGPEGPKGKPGARGLPGPRGAAGREGDEGPLGPPGPFGLEGQMGSK 895

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G PG  G+ G  G  G  G  GP G RG  G  G  G   +   K
Sbjct: 896 GFPGALGLEGVKGEQGVTGKAGPMGERGLVGFIGPGGEAGLAGEK 940



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 88/187 (47%), Gaps = 42/187 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-------- 164
           G+ G +G+ G  G KG++G+ GE+GE G  G  G  G  G+PG  GK GP+G        
Sbjct: 770 GVPGNMGESGLKGDKGDVGLPGEQGEIGFQGDKGVQGLPGLPGPRGKPGPQGKTGEIGPS 829

Query: 165 -------------DMGYP------GPQGIPGDEGKRGPKGDMGYPG------------RI 193
                        D+G P      GP+G PG  G  GP+G  G  G              
Sbjct: 830 GLPGPPGPEGFPGDIGKPGLNGPEGPKGKPGARGLPGPRGAAGREGDEGPLGPPGPFGLE 889

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G  G PG  GL+G+    G  G+ GK G  G+ G+ G  G  GE G+ G +G+RG+ 
Sbjct: 890 GQMGSKGFPGALGLEGV---KGEQGVTGKAGPMGERGLVGFIGPGGEAGLAGEKGDRGEM 946

Query: 254 GINGVPG 260
           G+ G PG
Sbjct: 947 GLPGPPG 953



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 69/142 (48%), Gaps = 33/142 (23%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK--------- 184
           G +G+KG PG+         PG +  +G KGD+G PGP G+ G EG++G K         
Sbjct: 599 GLKGKKGDPGLS--------PG-KAPKGDKGDVGLPGPVGLVGVEGRKGQKGHPGPPGLP 649

Query: 185 ------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                 G +G  G  G  GR GLPG  G  G  G  G  GIPG  GLPG DG        
Sbjct: 650 GEPGEQGPVGEAGAKGYPGRQGLPGPIGPVGPKGARGFIGIPGLFGLPGADG-------- 701

Query: 239 GEKGMTGPRGNRGKSGINGVPG 260
            E+G  GP G RGK G  G PG
Sbjct: 702 -ERGSPGPPGKRGKMGRPGFPG 722



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 65/126 (51%), Gaps = 6/126 (4%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            I L   QG      E   PG  GP G++G  G  G  G +G+RG KG PG +G PG  G+
Sbjct: 1409 IGLPGPQGSFGPKGERGLPGHPGPSGKRGFKGGMGLPGPQGDRGSKGQPGDIGEPGFPGM 1468

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G  G +GP GD G   P+GI   +G +GP+G+MG  G  G  G  G  G PG  G  G 
Sbjct: 1469 LGMFGPKGPPGDFG---PKGI---QGPKGPQGNMGRGGLAGPVGVIGPIGNPGSRGDTGN 1522

Query: 214  NGMDGI 219
             G  G+
Sbjct: 1523 KGELGV 1528



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 86/169 (50%), Gaps = 24/169 (14%)

Query: 113  GLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            G++GP G++G  G     GE+G +G++G  G PG +G PG  G  G+ G+ GPKG  G  
Sbjct: 986  GIRGPKGRRGPRGPDGVPGEIGTEGKKGPDGPPGKIGFPGHAGKIGESGEVGPKGFPGIQ 1045

Query: 170  GPQGIPGDEG------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            GP G  GD+G              GP+G+ G  G  G  G  GLPGEPG  G  G  G  
Sbjct: 1046 GPSGATGDKGIAGEPGPSGPPGTLGPQGNPGPKGPAGKVGDSGLPGEPGEKGSIGLAGNA 1105

Query: 218  GIP------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G        G+ GL G+ G  G +GT GEKG  G     G+ G+ G PG
Sbjct: 1106 GAAGLIGARGEPGLEGEAGPAGPDGTKGEKGDMG---TEGEQGVRGDPG 1151



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 81/211 (38%), Gaps = 72/211 (34%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP------------GP 171
            IG +G  G +G RG  G PG +G        G +G  GP G +G+P            GP
Sbjct: 985  IGIRGPKGRRGPRGPDGVPGEIG------TEGKKGPDGPPGKIGFPGHAGKIGESGEVGP 1038

Query: 172  QGIPGDEGKRGPKGDMGY------------------PGRIGLDGR---DGLPGEP----- 205
            +G PG +G  G  GD G                   PG  G  G+    GLPGEP     
Sbjct: 1039 KGFPGIQGPSGATGDKGIAGEPGPSGPPGTLGPQGNPGPKGPAGKVGDSGLPGEPGEKGS 1098

Query: 206  ----------------------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
                                        G DG  G  G  G  G+ G+ G  GI G +G 
Sbjct: 1099 IGLAGNAGAAGLIGARGEPGLEGEAGPAGPDGTKGEKGDMGTEGEQGVRGDPGIKGKDGP 1158

Query: 238  NGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G+ G+TG RG  GKSG +G  G P +   K
Sbjct: 1159 PGDPGLTGVRGPEGKSGKSGERGKPGLKGAK 1189


>gi|403297199|ref|XP_003939466.1| PREDICTED: collagen alpha-2(VI) chain isoform 2 [Saimiri
           boliviensis boliviensis]
          Length = 828

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 87/163 (53%), Gaps = 21/163 (12%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           PPG +G  GQKG  G  GE G  G++G +G PG+ GP   PGP+G+PG +G+   KG+ G
Sbjct: 257 PPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGVPGFKGE---KGEFG 313

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G +G  G  GK G  G  G  GRI         G PG  G PG  G DG PG+ G PG
Sbjct: 314 ADGRKGASGLAGKNGTDGQKGKLGRI---------GPPGCKGDPGNRGPDGYPGEAGSPG 364

Query: 228 KDGIPGTNGTNGEKGM------TGPRGNRGKSGINGVPGTPAI 264
           + G  G  G  G  G       +G +G++G  G +G PG+P +
Sbjct: 365 ERGDQGGKGEPGRPGRRGPPGDSGAKGSKGYQGNDGAPGSPGL 407



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 83/175 (47%), Gaps = 21/175 (12%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +G  G  GE G  GERG++G  G  G PG +G PGD G +G KG  G  G
Sbjct: 341 PPGCKGDPGNRGPDGYPGEAGSPGERGDQGGKGEPGRPGRRGPPGDSGAKGSKGYQGNDG 400

Query: 171 PQGIPG---------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G PG               + G+RG  G  G PG  G  G  G PG  G  G+ G  G
Sbjct: 401 APGSPGLKGAKGGPGPRGPKGEPGRRGDPGSKGSPGINGTKGEKGDPGPEGPRGLAGEVG 460

Query: 216 MDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  GLPG        G PG  G+ G+ G  GPRG+ G+ G  G PG P  
Sbjct: 461 SKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGF 515



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 67/127 (52%), Gaps = 22/127 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+ G  G+KG+ G +G  G+ GE G KGA G   + GP GPQG  G+ GK+G +GD G 
Sbjct: 435 PGINGTKGEKGDPGPEGPRGLAGEVGSKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGD 494

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------------GLDGIPGR 213
            GP+G   D G+ GPKGD G PG     G  G PGE                GL G PGR
Sbjct: 495 AGPRG---DSGQPGPKGDPGRPG-FSYPGPRGAPGEKGEPGPRGPEGGRGDFGLKGGPGR 550

Query: 214 NGMDGIP 220
            G  G P
Sbjct: 551 KGEKGEP 557



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 77/180 (42%), Gaps = 50/180 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPGV--- 144
           PG +GP G  GE G+ GE G +G +GE                         GAPG    
Sbjct: 348 PGNRGPDGYPGEAGSPGERGDQGGKGEPGRPGRRGPPGDSGAKGSKGYQGNDGAPGSPGL 407

Query: 145 ------------------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
                              G PG +G PG  G +G KGD G  GP+G+ G+ G +G KGD
Sbjct: 408 KGAKGGPGPRGPKGEPGRRGDPGSKGSPGINGTKGEKGDPGPEGPRGLAGEVGSKGAKGD 467

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR---NGMDGIPGKDGLPGKDGI--PGTNGTNGEK 241
            G PG  G  G  G PG+ G  G PG     G  G PG  G PG+ G   PG  G  GEK
Sbjct: 468 RGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGEK 527



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 56/112 (50%), Gaps = 18/112 (16%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIP 220
           G PGP+G     G++G KG+MG PG  G  GR G P      G PG  G+PG  G  G  
Sbjct: 256 GPPGPKGY---RGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGVPGFKGEKGEF 312

Query: 221 GKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPA 263
           G DG  G  G+ G NGT+G+K         G  G  GNRG  G  G  G+P 
Sbjct: 313 GADGRKGASGLAGKNGTDGQKGKLGRIGPPGCKGDPGNRGPDGYPGEAGSPG 364



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 74/170 (43%), Gaps = 29/170 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEM------------GVKGERGEKGAPGVVGPPGPQGIP----- 154
           PG  G  G++G+ G KGE             G KG +G +G  G  G PG +G       
Sbjct: 357 PGEAGSPGERGDQGGKGEPGRPGRRGPPGDSGAKGSKGYQGNDGAPGSPGLKGAKGGPGP 416

Query: 155 ----------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                     GD G +G  G  G  G +G PG EG RG  G++G  G  G  G  G  G 
Sbjct: 417 RGPKGEPGRRGDPGSKGSPGINGTKGEKGDPGPEGPRGLAGEVGSKGAKGDRGLPGPRGP 476

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT--GPRGNRGK 252
            G  G PG+ G  G PG  G  G  G PG  G  G  G +  GPRG  G+
Sbjct: 477 QGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGE 526



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 15/85 (17%)

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP G  GY G+ G  G  G PGEPG  G   R G  GI G  G PG  G+PG        
Sbjct: 256 GPPGPKGYRGQKGAKGNMGEPGEPGQKG---RQGDPGIEGPIGFPGPKGVPGF------- 305

Query: 242 GMTGPRGNRGKSGINGVPGTPAICA 266
                +G +G+ G +G  G   +  
Sbjct: 306 -----KGEKGEFGADGRKGASGLAG 325


>gi|345493584|ref|XP_003427100.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(IV) chain [Nasonia
           vitripennis]
          Length = 1880

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/150 (46%), Positives = 85/150 (56%), Gaps = 20/150 (13%)

Query: 135 ERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           E+G +G PG++GP GP+G    PG EG  GPKGD G PGPQ   G  G RG +G MG PG
Sbjct: 173 EKGSRGPPGLMGPVGPKGERGFPGAEGFLGPKGDKGDPGPQ---GQRGVRGERGKMGLPG 229

Query: 192 RIGLDGRDGLPGEPGLDGIPGR---NGMDGIPGKDGLPGKD---GIPGTNGTNGEKG--- 242
             G +G  G+PG  G  G+PGR   NG DG PG  GLPG+    G+PGT G  G+KG   
Sbjct: 230 HAGQNGVPGIPGAAGPPGMPGRDGCNGTDGAPGLHGLPGEPGPRGLPGTLGDKGDKGEAG 289

Query: 243 -----MTGPRGNRGKSGINGVPGTPAICAY 267
                +TG +G  G  G+ G  G P    Y
Sbjct: 290 HCGLLLTGQKGEPGSDGVQGARGIPGPQGY 319



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/166 (45%), Positives = 97/166 (58%), Gaps = 17/166 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG +GP G +G  G  G  G+KG+RGEKG  G  G PG  G PG  G  GPKGD+G+PG 
Sbjct: 1070 PGRRGPPGLQGRPGRDGAPGLKGDRGEKGLQGFPGMPGMDGKPGRPGDIGPKGDIGFPGE 1129

Query: 171  --PQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGL 225
              P G  G EG++G +GD GY G+ G  G+    G  GEPG+ GI G  G  G+ G+DG 
Sbjct: 1130 PGPMGPIGLEGEKGDRGDQGYTGQKGEPGQVSEKGQKGEPGMPGIRGPQGPPGLDGRDGE 1189

Query: 226  PGKDGIP--GTNGTNGEK---------GMTGPRGNRGKSGINGVPG 260
             G  G P  G +G  G+K         G+ GP+G+RG  G++G+PG
Sbjct: 1190 KGDAGEPGYGRDGPTGDKGEPGLPGRDGIPGPKGDRGDVGLSGLPG 1235



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 95/180 (52%), Gaps = 20/180 (11%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            GF        P GL+G  G +G+    G KGE G   E+G+KG PG+ G  GPQG PG +
Sbjct: 1125 GFPGEPGPMGPIGLEGEKGDRGDQGYTGQKGEPGQVSEKGQKGEPGMPGIRGPQGPPGLD 1184

Query: 158  GKRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GLPG 203
            G+ G KGD G P           G  G+PG +G  GPKGD G  G  GL G+    G PG
Sbjct: 1185 GRDGEKGDAGEPGYGRDGPTGDKGEPGLPGRDGIPGPKGDRGDVGLSGLPGQKGDIGFPG 1244

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSGINGVPG 260
              G  GIPG +G+DG+ G  G PG  G PG +G     G  G  GP+G RG  G+ G PG
Sbjct: 1245 PVGEPGIPGLDGIDGMKGDVGPPGMAGFPGLDGEVGLPGRPGFDGPKGERGLEGLEGPPG 1304



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 108/214 (50%), Gaps = 57/214 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV------------KGERGEKGAPGVVGPPGPQGIPGDEGK 159
            PG  GPIG +GE G +G+ G             KG++GE G PG+ GP GP G+ G +G+
Sbjct: 1130 PGPMGPIGLEGEKGDRGDQGYTGQKGEPGQVSEKGQKGEPGMPGIRGPQGPPGLDGRDGE 1189

Query: 160  RGPKGDMGY--------------PGPQGIPGDEGKRG---------PKGDMGYPGRIG-- 194
            +G  G+ GY              PG  GIPG +G RG          KGD+G+PG +G  
Sbjct: 1190 KGDAGEPGYGRDGPTGDKGEPGLPGRDGIPGPKGDRGDVGLSGLPGQKGDIGFPGPVGEP 1249

Query: 195  ----LDGRDGLPGE---------PGLD---GIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                LDG DG+ G+         PGLD   G+PGR G DG  G+ GL G +G PG +G  
Sbjct: 1250 GIPGLDGIDGMKGDVGPPGMAGFPGLDGEVGLPGRPGFDGPKGERGLEGLEGPPGYSGPL 1309

Query: 239  GEKGMTGPRG----NRGKSGINGVPGTPAICAYK 268
            GEKG  GP G     +G+ G  G PG P +   K
Sbjct: 1310 GEKGDRGPPGLTVNVKGEKGEPGRPGFPGLDGEK 1343



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 104/221 (47%), Gaps = 38/221 (17%)

Query: 97   VAMQGFCNSTKEYCPPGLQG---PIGQKGE--------------IGAKGEMGVKGERGEK 139
            V   G      EY  PGL G   P G+KG+               G KG  G+ G++G  
Sbjct: 1352 VGFVGEKGDKGEYGTPGLSGLPGPQGEKGDRGPFGPIGPPGLTVKGEKGLPGLHGKQGRD 1411

Query: 140  GAPGVVGPPGPQGIPGDEGKRGP------------KGDMGYPGPQGIPGDEGKRGPKGDM 187
            G PG+ G  G +G+PG  G +G             KGDMG PGP G+P   G+ GP G  
Sbjct: 1412 GYPGLPGAXGERGLPGLPGLKGDAGLPGPFGPPGMKGDMGLPGPTGLP---GRDGPSGLD 1468

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G PG IG  G  G  G PGL G PG+ G  G+ G+DGLPG  G  G  G  G +G+ G +
Sbjct: 1469 GIPGAIGDKGDKGDQGPPGLFGAPGQKGEPGLSGRDGLPGIPGEKGDRGWEGREGLQGLQ 1528

Query: 248  GNRGKSGINGVPGTPAICAY------KRESCSLLPNSETSQ 282
            G +G  G  GV G   I  +      K E+C  LP+    +
Sbjct: 1529 GEKGDRGYPGVDGQMGIAGFDGEKGDKGEACLALPSERGEK 1569



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 90/185 (48%), Gaps = 32/185 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG--EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            PG  G IG +G  G  G  G KGE G   KG+PG+ GP GP+G  G  G  G  G +GY 
Sbjct: 924  PGEPGLIGPRGLPGFNGRKGAKGEAGISMKGSPGLPGPQGPKGDKGLSGPVGKDGPVGYS 983

Query: 170  GPQGIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIP 211
            G  G PG++G  G  G  G PG                   +G  G DGL GEPGL G P
Sbjct: 984  GLPGTPGEKGDVGEPGLNGTPGSPGAKGDTGPIGPPGPQGIMGTPGTDGLKGEPGLPGEP 1043

Query: 212  GRNGMDGIP------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            GR G+ G+P            G  G PG+ G PG  G  G  G  G +G+RG+ G+ G P
Sbjct: 1044 GRTGLPGLPGVKGDMGVPGIDGAKGFPGRRGPPGLQGRPGRDGAPGLKGDRGEKGLQGFP 1103

Query: 260  GTPAI 264
            G P +
Sbjct: 1104 GMPGM 1108



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 88/180 (48%), Gaps = 41/180 (22%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPGL GP+G KGE G  G  G  G +G+KG       PGPQG  G  G+RG  G  G+ G
Sbjct: 179 PPGLMGPVGPKGERGFPGAEGFLGPKGDKGD------PGPQGQRGVRGERGKMGLPGHAG 232

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIP------------- 211
             G+PG  G  GP    G PGR G +G D      GLPGEPG  G+P             
Sbjct: 233 QNGVPGIPGAAGPP---GMPGRDGCNGTDGAPGLHGLPGEPGPRGLPGTLGDKGDKGEAG 289

Query: 212 ----------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGV 258
                     G  G DG+ G  G+PG  G PG  G  GE+   G TGP+G +G+ G  GV
Sbjct: 290 HCGLLLTGQKGEPGSDGVQGARGIPGPQGYPGQPGQKGERGPIGFTGPQGIKGEKGNMGV 349



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 130  MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            MG  G  G KG PG+ G PG  G+PG  G    KGDMG PG  G  G  G+RGP G  G 
Sbjct: 1025 MGTPGTDGLKGEPGLPGEPGRTGLPGLPGV---KGDMGVPGIDGAKGFPGRRGPPGLQGR 1081

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGP 246
            PGR G  G  G  GE GL G PG  GMDG PG+    G  G  G PG  G  G  G+ G 
Sbjct: 1082 PGRDGAPGLKGDRGEKGLQGFPGMPGMDGKPGRPGDIGPKGDIGFPGEPGPMGPIGLEGE 1141

Query: 247  RGNRGKSGINGVPGTPAICAYKRE 270
            +G+RG  G  G  G P   + K +
Sbjct: 1142 KGDRGDQGYTGQKGEPGQVSEKGQ 1165



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 78/149 (52%), Gaps = 17/149 (11%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP--QGIPGDEGKRGPKGDMGYPGPQGIP 175
           +G  G  G  G  G KG++GEKG  G  G PG   +GIPG  G  G  G+ G PG  G P
Sbjct: 590 VGPAGMDGINGRDGAKGQKGEKGYGGSRGRPGDSLEGIPGAPGAPGLPGEAGVPGRDGAP 649

Query: 176 GDEGKRGPKGDMG------------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G  G KGD+G              G  GLDGRDGLPG     G PG  G  G PG D
Sbjct: 650 GFPGLPGEKGDIGGRCTQCLPGIKGIKGDRGLDGRDGLPG---ARGPPGERGFPGEPGLD 706

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
           GLPG  G+PG  G +G  G  GP+G +G+
Sbjct: 707 GLPGPIGLPGARGKDGIPGSPGPQGEQGR 735



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 102/214 (47%), Gaps = 41/214 (19%)

Query: 112 PGLQGPIGQKGEIGAK------GEMGVKGER---GEKGAPGVVGPPGPQGIPGD------ 156
           PG  G  G+KG+IG +      G  G+KG+R   G  G PG  GPPG +G PG+      
Sbjct: 649 PGFPGLPGEKGDIGGRCTQCLPGIKGIKGDRGLDGRDGLPGARGPPGERGFPGEPGLDGL 708

Query: 157 ------EGKRGPKGDMGYPGPQGIPG------------DEGKRGPKGDMGYPGRIGLD-- 196
                  G RG  G  G PGPQG  G            ++G++G +GD G PG  G +  
Sbjct: 709 PGPIGLPGARGKDGIPGSPGPQGEQGRDCVITKDQFKLEKGQKGERGDEGRPGPTGPEGP 768

Query: 197 -GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT--GPRGNRGKS 253
            G  G  G PG  G  G  G  G+PG DG+PG+   PG +G  GE G++  G +G+RG+ 
Sbjct: 769 IGEKGRAGSPGFPGTKGDTGERGLPGLDGIPGR---PGFSGQKGEAGLSIKGEQGDRGRD 825

Query: 254 GINGVPGTPAICAYKRESCSLLPNSETSQLLIPP 287
           G  G  G P     K E+    P +     + PP
Sbjct: 826 GYPGQKGEPGYTGLKGEAGQCPPLTLKELAVGPP 859



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 98/192 (51%), Gaps = 36/192 (18%)

Query: 111  PPGLQGPIGQKGEIG--AKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGD 165
            PPGL G  G+KG+ G    G  G  G++GE G PG  G PGP+G  GD    G  G KGD
Sbjct: 1180 PPGLDGRDGEKGDAGEPGYGRDGPTGDKGEPGLPGRDGIPGPKGDRGDVGLSGLPGQKGD 1239

Query: 166  MGYPGP---QGIPGDEGKRGPKGDMGYPGRIG---LDGRDGLPG---------EPGLDGI 210
            +G+PGP    GIPG +G  G KGD+G PG  G   LDG  GLPG         E GL+G+
Sbjct: 1240 IGFPGPVGEPGIPGLDGIDGMKGDVGPPGMAGFPGLDGEVGLPGRPGFDGPKGERGLEGL 1299

Query: 211  PGRNGMDG----------------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G                + G+ G PG+ G PG +G  G+ G+ GP G  G+ G
Sbjct: 1300 EGPPGYSGPLGEKGDRGPPGLTVNVKGEKGEPGRPGFPGLDGEKGDIGLPGPVGFVGEKG 1359

Query: 255  INGVPGTPAICA 266
              G  GTP +  
Sbjct: 1360 DKGEYGTPGLSG 1371



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 97/212 (45%), Gaps = 54/212 (25%)

Query: 111  PPGLQGPIGQKGEIGAKG-EMGVKGERGEKGAPGV---------VGPPGPQGI---PGDE 157
            PPG  GP+G+KG+ G  G  + VKGE+GE G PG          +G PGP G     GD+
Sbjct: 1302 PPGYSGPLGEKGDRGPPGLTVNVKGEKGEPGRPGFPGLDGEKGDIGLPGPVGFVGEKGDK 1361

Query: 158  GKRGPKGDMGYPGPQGIPGDE--------------------GKRGPKGDMGYPGRIGLDG 197
            G+ G  G  G PGPQG  GD                     G  G +G  GYPG  G  G
Sbjct: 1362 GEYGTPGLSGLPGPQGEKGDRGPFGPIGPPGLTVKGEKGLPGLHGKQGRDGYPGLPGAXG 1421

Query: 198  RDGLPGEPGLDGIP---------------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
              GLPG PGL G                 G  G  G+PG+DG  G DGIPG  G  G+KG
Sbjct: 1422 ERGLPGLPGLKGDAGLPGPFGPPGMKGDMGLPGPTGLPGRDGPSGLDGIPGAIGDKGDKG 1481

Query: 243  MTGP------RGNRGKSGINGVPGTPAICAYK 268
              GP       G +G+ G++G  G P I   K
Sbjct: 1482 DQGPPGLFGAPGQKGEPGLSGRDGLPGIPGEK 1513



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 82/166 (49%), Gaps = 21/166 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------------E 157
            GL GP+G+ G +G  G  G  GE+G+ G PG+ G PG  G  GD                
Sbjct: 969  GLSGPVGKDGPVGYSGLPGTPGEKGDVGEPGLNGTPGSPGAKGDTGPIGPPGPQGIMGTP 1028

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN 214
            G  G KG+ G PG  G  G  G  G KGDMG PG   +DG  G PG    PGL G PGR+
Sbjct: 1029 GTDGLKGEPGLPGEPGRTGLPGLPGVKGDMGVPG---IDGAKGFPGRRGPPGLQGRPGRD 1085

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G  G  G PG  G +G+ G  G  G +G  G  G PG
Sbjct: 1086 GAPGLKGDRGEKGLQGFPGMPGMDGKPGRPGDIGPKGDIGFPGEPG 1131



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 85/179 (47%), Gaps = 37/179 (20%)

Query: 101 GFCNSTKEYCPPGLQGP-----------------IGQKGEIGAKGEMGVKGERGEKGAPG 143
           G      E  P G  GP                 +G  G  G  G  G KG++GEKG  G
Sbjct: 556 GLAGFPGEAGPRGFTGPMGPPGPRGPQGEKGLSIVGPAGMDGINGRDGAKGQKGEKGYGG 615

Query: 144 VVGPPGP--QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM------------GY 189
             G PG   +GIPG  G  G  G+ G PG  G PG  G  G KGD+            G 
Sbjct: 616 SRGRPGDSLEGIPGAPGAPGLPGEAGVPGRDGAPGFPGLPGEKGDIGGRCTQCLPGIKGI 675

Query: 190 PGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKG 242
            G  GLDGRDGLPG    PG  G PG  G+DG+PG  GLP   GKDGIPG+ G  GE+G
Sbjct: 676 KGDRGLDGRDGLPGARGPPGERGFPGEPGLDGLPGPIGLPGARGKDGIPGSPGPQGEQG 734



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 100/229 (43%), Gaps = 76/229 (33%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD--------EGKRGP 162
           P G +GPIG+KG  G+ G  G KG+ GE+G PG+ G PG  G  G         +G++G 
Sbjct: 762 PTGPEGPIGEKGRAGSPGFPGTKGDTGERGLPGLDGIPGRPGFSGQKGEAGLSIKGEQGD 821

Query: 163 KGDMGYPGPQGIP----------------------GDEGKRGPKGDMGYPGRIGLDG--- 197
           +G  GYPG +G P                      G  G RGPKG+ G PG  G  G   
Sbjct: 822 RGRDGYPGQKGEPGYTGLKGEAGQCPPLTLKELAVGPPGDRGPKGEPGLPGYDGQKGDRG 881

Query: 198 --------------------RD------------------GLPGEPGL---DGIPGRNGM 216
                               RD                  G PGEPGL    G+PG NG 
Sbjct: 882 FTGEPGPPGPIGPVGAPGTKRDLEGLPGTPWEKKGNTGPMGFPGEPGLIGPRGLPGFNGR 941

Query: 217 DGIPGKDG--LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G+ G  + G  G+PG  G  G+KG++GP G  G  G +G+PGTP 
Sbjct: 942 KGAKGEAGISMKGSPGLPGPQGPKGDKGLSGPVGKDGPVGYSGLPGTPG 990



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 77/143 (53%), Gaps = 9/143 (6%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G  G  G KGE G+ GE G  G PG+ G  G  G+PG +G +G  G  G PG QG PG 
Sbjct: 1025 MGTPGTDGLKGEPGLPGEPGRTGLPGLPGVKGDMGVPGIDGAKGFPGRRGPPGLQGRPGR 1084

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            +G  G KGD G        G  G PG PG+DG PGR G  G  G  G PG+ G  G  G 
Sbjct: 1085 DGAPGLKGDRGE------KGLQGFPGMPGMDGKPGRPGDIGPKGDIGFPGEPGPMGPIGL 1138

Query: 238  NGEKGMTGPRGNRGKSGINGVPG 260
             GEKG    RG++G +G  G PG
Sbjct: 1139 EGEKGD---RGDQGYTGQKGEPG 1158



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 96/220 (43%), Gaps = 59/220 (26%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKG--------APGVVGPPGPQGIPGDEGKRG- 161
           P G+ G  G+ G  G KGE G  G RG  G        APG  G PG  G+PG +G  G 
Sbjct: 592 PAGMDGINGRDGAKGQKGEKGYGGSRGRPGDSLEGIPGAPGAPGLPGEAGVPGRDGAPGF 651

Query: 162 -----PKGDMG------YPGPQGIPGDEG---------KRGPKGDMGYPGRIGLDGRDG- 200
                 KGD+G       PG +GI GD G          RGP G+ G+PG  GLDG  G 
Sbjct: 652 PGLPGEKGDIGGRCTQCLPGIKGIKGDRGLDGRDGLPGARGPPGERGFPGEPGLDGLPGP 711

Query: 201 --LPGEPGLDGIPGRNGMDGIPGKD---------------GLPGKDGIPGTNGTN---GE 240
             LPG  G DGIPG  G  G  G+D               G  G +G PG  G     GE
Sbjct: 712 IGLPGARGKDGIPGSPGPQGEQGRDCVITKDQFKLEKGQKGERGDEGRPGPTGPEGPIGE 771

Query: 241 KGMTGP---------RGNRGKSGINGVPGTPAICAYKRES 271
           KG  G           G RG  G++G+PG P     K E+
Sbjct: 772 KGRAGSPGFPGTKGDTGERGLPGLDGIPGRPGFSGQKGEA 811



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 84/164 (51%), Gaps = 25/164 (15%)

Query: 113  GLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGV---------VGPPGPQGIPGDE 157
            G+ GP G +G++G       KG++G  G  GE G PG+         VGPPG  G PG +
Sbjct: 1217 GIPGPKGDRGDVGLSGLPGQKGDIGFPGPVGEPGIPGLDGIDGMKGDVGPPGMAGFPGLD 1276

Query: 158  GK---------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG-RIGLDGRDGLPGEPGL 207
            G+          GPKG+ G  G +G PG  G  G KGD G PG  + + G  G PG PG 
Sbjct: 1277 GEVGLPGRPGFDGPKGERGLEGLEGPPGYSGPLGEKGDRGPPGLTVNVKGEKGEPGRPGF 1336

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G+ G  G  G+PG  G  G+ G  G  GT G  G+ GP+G +G
Sbjct: 1337 PGLDGEKGDIGLPGPVGFVGEKGDKGEYGTPGLSGLPGPQGEKG 1380



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 88/190 (46%), Gaps = 48/190 (25%)

Query: 101  GFCNSTKEYCPPGLQGPIGQK---------------GEIGAKGEMGVKGERGEKGAPGVV 145
            GF     E   PGL G  G K               GE+G  G  G  G +GE+G  G+ 
Sbjct: 1241 GFPGPVGEPGIPGLDGIDGMKGDVGPPGMAGFPGLDGEVGLPGRPGFDGPKGERGLEGLE 1300

Query: 146  GPPGPQGIPGDEGKRGP-------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            GPPG  G  G++G RGP       KG+ G PG  G PG +G+   KGD+G PG +G  G 
Sbjct: 1301 GPPGYSGPLGEKGDRGPPGLTVNVKGEKGEPGRPGFPGLDGE---KGDIGLPGPVGFVGE 1357

Query: 199  DGLPGE---PGLDGIPGRNGMDG--------------IPGKDGLP------GKDGIPGTN 235
             G  GE   PGL G+PG  G  G              + G+ GLP      G+DG PG  
Sbjct: 1358 KGDKGEYGTPGLSGLPGPQGEKGDRGPFGPIGPPGLTVKGEKGLPGLHGKQGRDGYPGLP 1417

Query: 236  GTNGEKGMTG 245
            G  GE+G+ G
Sbjct: 1418 GAXGERGLPG 1427



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 92/211 (43%), Gaps = 58/211 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--------------------VVGPPGPQG 152
           G+ G  G  G+ GAKGE G+ G  GE G  G                    +VGP G  G
Sbjct: 538 GVPGTEGAPGDKGAKGEPGLAGFPGEAGPRGFTGPMGPPGPRGPQGEKGLSIVGPAGMDG 597

Query: 153 IPGDEGKRGPKGDMGY--------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
           I G +G +G KG+ GY              PG  G PG        G+ G PGR G  G 
Sbjct: 598 INGRDGAKGQKGEKGYGGSRGRPGDSLEGIPGAPGAPGL------PGEAGVPGRDGAPGF 651

Query: 199 DGLPGE------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---KGM 243
            GLPGE            PG+ GI G  G+D   G+DGLPG  G PG  G  GE    G+
Sbjct: 652 PGLPGEKGDIGGRCTQCLPGIKGIKGDRGLD---GRDGLPGARGPPGERGFPGEPGLDGL 708

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            GP G  G  G +G+PG+P     +   C +
Sbjct: 709 PGPIGLPGARGKDGIPGSPGPQGEQGRDCVI 739



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 76/160 (47%), Gaps = 32/160 (20%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG--------YPGPQGIPGDEGKRGPK 184
            KG  G  G PG  G  GP+G+PG  G++G KG+ G         PGPQG  GD+G  GP 
Sbjct: 915  KGNTGPMGFPGEPGLIGPRGLPGFNGRKGAKGEAGISMKGSPGLPGPQGPKGDKGLSGP- 973

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---------------------GIPGKD 223
              +G  G +G  G  G PGE G  G PG NG                       G PG D
Sbjct: 974  --VGKDGPVGYSGLPGTPGEKGDVGEPGLNGTPGSPGAKGDTGPIGPPGPQGIMGTPGTD 1031

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            GL G+ G+PG  G  G  G+ G +G+ G  GI+G  G P 
Sbjct: 1032 GLKGEPGLPGEPGRTGLPGLPGVKGDMGVPGIDGAKGFPG 1071



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 95/198 (47%), Gaps = 41/198 (20%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGV-----KGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           E  P GL G +G KG+ G  G  G+     KGE G  G  G  G PGPQG PG  G++G 
Sbjct: 269 EPGPRGLPGTLGDKGDKGEAGHCGLLLTGQKGEPGSDGVQGARGIPGPQGYPGQPGQKGE 328

Query: 163 KGDMGYPGPQGIPGDEG-----------------KRGPKGD----------------MGY 189
           +G +G+ GPQGI G++G                 + GP G+                +G 
Sbjct: 329 RGPIGFTGPQGIKGEKGNMGVGFEGKKGDKGDKGEVGPPGESVTQPFESGGQEVIGPVGP 388

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G  G  G  G  G+ G  G  G NG+ G+    G+ GLPG  GI G +G +G  G  G 
Sbjct: 389 AGAKGDKGDTGFYGQKGEPGYVGDNGVPGLNGPKGEKGLPGAPGIRGRDGYSGPPGPPGR 448

Query: 247 RGNRGKSGINGVPGTPAI 264
           +G+RG  G +G+PG P +
Sbjct: 449 KGDRGYDGADGLPGVPGV 466



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 102/251 (40%), Gaps = 69/251 (27%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY------P 169
           GP GQ+G  G +G+MG+ G  G+ G PG+ G  GP G+PG +G  G  G  G       P
Sbjct: 211 GPQGQRGVRGERGKMGLPGHAGQNGVPGIPGAAGPPGMPGRDGCNGTDGAPGLHGLPGEP 270

Query: 170 GPQGIPGDEGKRGPKGDMGY-----------PGRIGLDGRDGLPGEPGLDGIPGRNGM-- 216
           GP+G+PG  G +G KG+ G+           PG  G+ G  G+PG  G  G PG+ G   
Sbjct: 271 GPRGLPGTLGDKGDKGEAGHCGLLLTGQKGEPGSDGVQGARGIPGPQGYPGQPGQKGERG 330

Query: 217 -------DGIPGKDG--------------------LPGKD-------------GIPGTNG 236
                   GI G+ G                     PG+              G  G  G
Sbjct: 331 PIGFTGPQGIKGEKGNMGVGFEGKKGDKGDKGEVGPPGESVTQPFESGGQEVIGPVGPAG 390

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIF 296
             G+KG TG  G +G+ G  G  G P +   K E    LP +        P I G +   
Sbjct: 391 AKGDKGDTGFYGQKGEPGYVGDNGVPGLNGPKGEKG--LPGA--------PGIRGRDGYS 440

Query: 297 SSSPIVVREGD 307
                  R+GD
Sbjct: 441 GPPGPPGRKGD 451



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 99/275 (36%), Gaps = 125/275 (45%)

Query: 112 PGLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPGVVGPP----------- 148
           PGL GP G+KG  GA G  G             KG+RG  GA G+ G P           
Sbjct: 416 PGLNGPKGEKGLPGAPGIRGRDGYSGPPGPPGRKGDRGYDGADGLPGVPGVKGDAGLDGP 475

Query: 149 --------------------------GPQGIPGDEGKRGPKGD----------------- 165
                                     GP+G PG  G RG  G                  
Sbjct: 476 PGIPGLRGPPGPPGGGKGQPGPPGEKGPRGYPGAIGLRGSDGYPGAPGPRGPVGPMGGPG 535

Query: 166 -MGYPGPQGIPGDEGKRGPKGDMGYPGRI------------------------------- 193
             G PG +G PGD+G +G  G  G+PG                                 
Sbjct: 536 LAGVPGTEGAPGDKGAKGEPGLAGFPGEAGPRGFTGPMGPPGPRGPQGEKGLSIVGPAGM 595

Query: 194 -GLDGRDGLPGEPG--------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G++GRDG  G+ G              L+GIPG  G  G+PG+ G+PG+DG PG  G  
Sbjct: 596 DGINGRDGAKGQKGEKGYGGSRGRPGDSLEGIPGAPGAPGLPGEAGVPGRDGAPGFPGLP 655

Query: 239 GEKGMTGPR------------GNRGKSGINGVPGT 261
           GEKG  G R            G+RG  G +G+PG 
Sbjct: 656 GEKGDIGGRCTQCLPGIKGIKGDRGLDGRDGLPGA 690



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 74/166 (44%), Gaps = 56/166 (33%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
            G+ G IG KG+ G +G  G+ G  G+KG PG+ G  G  GIPG++G RG           
Sbjct: 1469 GIPGAIGDKGDKGDQGPPGLFGAPGQKGEPGLSGRDGLPGIPGEKGDRGWEGREGLQGLQ 1528

Query: 162  -PKGDMGYPGPQGI---------PGDEGK--------RGPKGD----------------- 186
              KGD GYPG  G           GD+G+        RG KGD                 
Sbjct: 1529 GEKGDRGYPGVDGQMGIAGFDGEKGDKGEACLALPSERGEKGDRGLPGPVGPPGPSGPKG 1588

Query: 187  -MGYPGRIGLDGRDGL------PGEPGLDGIPGRNGMDGIPGKDGL 225
              G PG  G+DG  G+      PG PGL G+P   G+ G PG  GL
Sbjct: 1589 DAGQPGFPGMDGPKGMTGFTGPPGSPGLRGLP---GLQGPPGPTGL 1631



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 52/98 (53%), Gaps = 18/98 (18%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           IG  G  GAKG+ G  G  G+KG PG VG     G+PG     GPKG+ G PG  GI G 
Sbjct: 383 IGPVGPAGAKGDKGDTGFYGQKGEPGYVGD---NGVPG---LNGPKGEKGLPGAPGIRGR 436

Query: 178 EG------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
           +G        G KGD GY      DG DGLPG PG+ G
Sbjct: 437 DGYSGPPGPPGRKGDRGY------DGADGLPGVPGVKG 468


>gi|295815589|gb|ADG36302.1| collagen type XI alpha-2 [Danio rerio]
          Length = 1803

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 86/154 (55%), Gaps = 15/154 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QG IG  G  G KG  G++G +G KG  G  G PG   I GD G +G +G++G PG
Sbjct: 735 PNGPQGSIGYPGPRGLKGAQGIRGLKGHKGEKGEDGFPG---IKGDFGVKGERGEVGVPG 791

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIG---LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           P+G   ++G  GPKG +G PG IG   L G  G  G PGL G PGR G+ G  G  G PG
Sbjct: 792 PRG---EDGPEGPKGRVGPPGEIGPLGLLGEKGKLGVPGLPGYPGRQGIKGSLGFPGFPG 848

Query: 228 KDGIPGTNGT------NGEKGMTGPRGNRGKSGI 255
            +G  GT G        G++G TGPRG RG  G 
Sbjct: 849 TNGEKGTRGLIGKPGPRGQRGPTGPRGQRGPRGA 882



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 93/194 (47%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGD 165
           PG QG  G +G  G  GE G  G+ G  G PG  GPPG      P G  G++G  GP+G 
Sbjct: 682 PGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPGGTKGNQGPNGPQGS 741

Query: 166 MGYPGPQG------------------------IPGDEGKRGPKGDMGYPGRIGLDG---- 197
           +GYPGP+G                        I GD G +G +G++G PG  G DG    
Sbjct: 742 IGYPGPRGLKGAQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEGP 801

Query: 198 --RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMT----- 244
             R G PGE G  G+ G  G  G+PG  G PG+ GI      PG  GTNGEKG       
Sbjct: 802 KGRVGPPGEIGPLGLLGEKGKLGVPGLPGYPGRQGIKGSLGFPGFPGTNGEKGTRGLIGK 861

Query: 245 -GPRGNRGKSGING 257
            GPRG RG +G  G
Sbjct: 862 PGPRGQRGPTGPRG 875



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 78/158 (49%), Gaps = 15/158 (9%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A G  G+ G +G  G PG  GP G  G+PG  G  GP G  G  GP G  G++G  GP+G
Sbjct: 681 APGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPGGTKGNQGPNGPQG 740

Query: 186 DMGYPGRIGLDGRDGL------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            +GYPG  GL G  G+       GE G DG PG  G  G+ G+ G  G  G  G +G  G
Sbjct: 741 SIGYPGPRGLKGAQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEG 800

Query: 240 EKGMTGP---------RGNRGKSGINGVPGTPAICAYK 268
            KG  GP          G +GK G+ G+PG P     K
Sbjct: 801 PKGRVGPPGEIGPLGLLGEKGKLGVPGLPGYPGRQGIK 838



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 88/210 (41%), Gaps = 66/210 (31%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG---------------PQG 152
           PPG  G  G+ G  GA+G   E G+KG+RG  G PG+ G  G                 G
Sbjct: 558 PPGKAGRRGRAGADGARGMPGESGIKGDRGFDGLPGLPGDKGYRGQPGGMGPPGPHGEDG 617

Query: 153 IPGDEGKRGPKGDMGYPGPQGI-------------------------------------- 174
             GD+G  GP+G  G PGP+G+                                      
Sbjct: 618 ERGDDGDVGPRGLPGEPGPRGLLGPKGPSGLPGPPGVRGNDGPHGPKGNLGPQGEPGPPG 677

Query: 175 ----PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
               PG +G  GP+G  G PG  G  G+ GLPG PG DG PG       PGK+G  G  G
Sbjct: 678 QQGAPGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGH------PGKEGPGGTKG 731

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G NG  G  G  GPRG +G  GI G+ G
Sbjct: 732 NQGPNGPQGSIGYPGPRGLKGAQGIRGLKG 761



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 93/212 (43%), Gaps = 57/212 (26%)

Query: 111 PPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------- 160
           P G+ GP    G++G  GA G  G+ GE G KG  G  G PG   +PGD+G R       
Sbjct: 552 PQGVSGPPGKAGRRGRAGADGARGMPGESGIKGDRGFDGLPG---LPGDKGYRGQPGGMG 608

Query: 161 --------GPKGDMGYPGPQGIPGDEGKR------------------------GPKGDM- 187
                   G +GD G  GP+G+PG+ G R                        GPKG++ 
Sbjct: 609 PPGPHGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPSGLPGPPGVRGNDGPHGPKGNLG 668

Query: 188 -----------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                      G PG  G+ G  G  G PG  G  G+ G+ G+PG DG PG  G  G  G
Sbjct: 669 PQGEPGPPGQQGAPGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPGG 728

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           T G +G  GP+G+ G  G  G+ G   I   K
Sbjct: 729 TKGNQGPNGPQGSIGYPGPRGLKGAQGIRGLK 760



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 80/201 (39%), Gaps = 59/201 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGP-------------------PGPQGIPG---DEGKRGPKG 164
           +G   V+  +GEKG P V+ P                    GPQG PG   D G+RGP G
Sbjct: 401 EGGASVRAIKGEKGEPAVLEPGMLIEGPPGPEGPAGLPGPSGPQGQPGSVGDPGERGPTG 460

Query: 165 DMGYPGPQGIPGDEGK-------------------------------------RGPKGDM 187
             G PG  G+PG  G                                      +GP G M
Sbjct: 461 KAGLPGADGVPGPPGTSVMLPFRFGQSAGEKGPVASAQEAQAQAILSQARLALKGPSGPM 520

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G+ GR G  G  G PG  G  G PG  G  G  G  G PGK G  G  G +G +GM G  
Sbjct: 521 GFTGRPGPLGTPGSPGFKGERGDPGAQGPRGPQGVSGPPGKAGRRGRAGADGARGMPGES 580

Query: 248 GNRGKSGINGVPGTPAICAYK 268
           G +G  G +G+PG P    Y+
Sbjct: 581 GIKGDRGFDGLPGLPGDKGYR 601



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 66/135 (48%), Gaps = 21/135 (15%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +G  G  G  G PGP G PG  G +G +GD   PG QG  G +G  GP G  G  GR G 
Sbjct: 514 KGPSGPMGFTGRPGPLGTPGSPGFKGERGD---PGAQGPRGPQGVSGPPGKAGRRGRAGA 570

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------------IPGTNGTNGEKGM 243
           DG  G+PGE    GI G  G DG+P   GLPG  G              G +G  G+ G 
Sbjct: 571 DGARGMPGE---SGIKGDRGFDGLP---GLPGDKGYRGQPGGMGPPGPHGEDGERGDDGD 624

Query: 244 TGPRGNRGKSGINGV 258
            GPRG  G+ G  G+
Sbjct: 625 VGPRGLPGEPGPRGL 639



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 69/146 (47%), Gaps = 21/146 (14%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------- 173
            +G  G +GE G KG+ G  G PG  GP GPQG PG  G  G +G  G  G QG       
Sbjct: 1354 RGPEGRQGEKGSKGDSGALGPPGKTGPVGPQGQPGKPGTEGLRGLPGTVGEQGSPGAAGP 1413

Query: 174  -----------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
                       + G  G  G KG+ G+PG +GL G  G  GE G  G+PG  G  G  G+
Sbjct: 1414 KGPPGPLGPPGLAGLRGDPGAKGEKGHPGMLGLIGPAGEQGEKGDRGMPGPQGSTGPKGE 1473

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+ G     G  G  G  GM GPRG
Sbjct: 1474 TGISGGT---GPLGPAGPAGMPGPRG 1496



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 71/178 (39%), Gaps = 45/178 (25%)

Query: 131  GVKGERGEKGAPGVVGPP---------------------GPQGIPGDEGKRGPKGDMGYP 169
            G KG+RGE G  G  G P                     GP+G  G++G +G  G +G P
Sbjct: 1316 GAKGDRGEDGEQGEAGSPGPTGENGPPGPPGKRGPAGTRGPEGRQGEKGSKGDSGALGPP 1375

Query: 170  ---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------------GLPGEP 205
               GP G  G  GK G +G  G PG +G  G                       G PG  
Sbjct: 1376 GKTGPVGPQGQPGKPGTEGLRGLPGTVGEQGSPGAAGPKGPPGPLGPPGLAGLRGDPGAK 1435

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G PG  G+ G  G+ G  G  G+PG  G+ G KG TG  G  G  G  G  G P 
Sbjct: 1436 GEKGHPGMLGLIGPAGEQGEKGDRGMPGPQGSTGPKGETGISGGTGPLGPAGPAGMPG 1493



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 56/130 (43%), Gaps = 36/130 (27%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKG------------------------------ERGEKG 140
            PPG  GP+G +G+ G  G  G++G                               RG+ G
Sbjct: 1374 PPGKTGPVGPQGQPGKPGTEGLRGLPGTVGEQGSPGAAGPKGPPGPLGPPGLAGLRGDPG 1433

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            A G  G PG  G+ G  G++G KGD G PGPQ      G  GPKG+ G  G  G  G  G
Sbjct: 1434 AKGEKGHPGMLGLIGPAGEQGEKGDRGMPGPQ------GSTGPKGETGISGGTGPLGPAG 1487

Query: 201  LPGEPGLDGI 210
              G PG  G+
Sbjct: 1488 PAGMPGPRGV 1497


>gi|167535573|ref|XP_001749460.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772088|gb|EDQ85745.1| predicted protein [Monosiga brevicollis MX1]
          Length = 940

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 89/171 (52%), Gaps = 6/171 (3%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L    G   S       G +G  G+ G  G  GE G+KG  G  GAPG  GP G +G PG
Sbjct: 147 LDGTNGVDGSDGAMGDKGYKGDTGRAGRPGRPGEAGIKGRDGLDGAPGSAGPDGDRGFPG 206

Query: 156 ---DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP- 211
              D+G+ GP G  G PG  G PG +G++G +GD+G+PG  G DG  G PG PG DG P 
Sbjct: 207 YTGDKGRAGPAGPSGTPGSNGRPGPDGRKGERGDIGFPGFPGPDGATGRPGRPGPDGRPA 266

Query: 212 --GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G  G  G+ G  G +G +  KG TGPRG  G  G +G  G
Sbjct: 267 NKGAAGPMGSAGPQGFKGQKGAAGVDGNDNSKGATGPRGETGLDGRDGTDG 317



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 91/155 (58%), Gaps = 6/155 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKGDMGYP 169
           G++G  GQ GE G  G +G  G +G  G PG  G   P G +G+PG  G+RG  GD G  
Sbjct: 538 GVKGRDGQPGEDGLPGFVGPAGNKGITGRPGRDGDIMPDGDKGLPGPSGERGLPGDKGDD 597

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G +G+PG +G +G KG +G PGR G  GRDG  G+PG  G PGR+  DG  G+ G   +D
Sbjct: 598 GARGLPGFDGPKGIKGRVGIPGRDGTPGRDGAKGQPGAMGQPGRDAEDGAKGQPGSNAED 657

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G+P   G  G+ G  GP+G +G  G++G PG P  
Sbjct: 658 GLP---GPAGDAGRVGPKGRKGMDGLDGQPGAPGA 689



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 94/186 (50%), Gaps = 37/186 (19%)

Query: 115 QGPIGQKGEIGAK---------------------GEMGVKGERGEKGAPGVVGPPGPQGI 153
           +GP G +GE GA+                     G +G  G+RG+KG   + G PG +G 
Sbjct: 25  KGPKGDRGETGAQGLPGPQGPGGKGGDGGYNGRNGALGEDGDRGDKG---LAGRPGLKGE 81

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G +G++G  G+ G  G QG PGD G+ GPK   GYPG  G+ G DG  G PG DG+PG 
Sbjct: 82  KGTDGRKGMIGEQGDAGDQGQPGDNGRDGPK---GYPGSPGVAGADGTDGRPGEDGLPGP 138

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK-RESC 272
           +G DG+PG D         GTNG +G  G  G +G +G +G  G PG P     K R+  
Sbjct: 139 DGDDGLPGLD---------GTNGVDGSDGAMGDKGYKGDTGRAGRPGRPGEAGIKGRDGL 189

Query: 273 SLLPNS 278
              P S
Sbjct: 190 DGAPGS 195



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/151 (46%), Positives = 83/151 (54%), Gaps = 9/151 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +G IG++G+ G +G+ G  G  G KG   +PGV G  G  G PG++G  GP GD G P
Sbjct: 86  GRKGMIGEQGDAGDQGQPGDNGRDGPKGYPGSPGVAGADGTDGRPGEDGLPGPDGDDGLP 145

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G  G +G  G  GD GY G  G  GR   PG PG  GI GR+G+DG PG  G  G  
Sbjct: 146 GLDGTNGVDGSDGAMGDKGYKGDTGRAGR---PGRPGEAGIKGRDGLDGAPGSAGPDGDR 202

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G P   G  G+KG  GP G  G  G NG PG
Sbjct: 203 GFP---GYTGDKGRAGPAGPSGTPGSNGRPG 230



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 94/169 (55%), Gaps = 21/169 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
           G  G  G +G+ G  G  G+KGE+G  G  G++G     G QG PGD G+ GPKG   YP
Sbjct: 59  GALGEDGDRGDKGLAGRPGLKGEKGTDGRKGMIGEQGDAGDQGQPGDNGRDGPKG---YP 115

Query: 170 GPQGI---------PGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G+         PG++G  GP GD G P   G  G+DG DG  G+ G  G  GR G  
Sbjct: 116 GSPGVAGADGTDGRPGEDGLPGPDGDDGLPGLDGTNGVDGSDGAMGDKGYKGDTGRAGRP 175

Query: 218 GIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G PG+ G+ G+DG+   PG+ G +G++G  G  G++G++G  G  GTP 
Sbjct: 176 GRPGEAGIKGRDGLDGAPGSAGPDGDRGFPGYTGDKGRAGPAGPSGTPG 224



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/152 (44%), Positives = 78/152 (51%), Gaps = 6/152 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGY 168
           PGL G  G  G  GA G+ G KG+ G  G PG  G  G     G+ G  G  GP GD G+
Sbjct: 145 PGLDGTNGVDGSDGAMGDKGYKGDTGRAGRPGRPGEAGIKGRDGLDGAPGSAGPDGDRGF 204

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG     GD+G+ GP G  G PG  G  G DG  GE G  G PG  G DG  G+ G PG 
Sbjct: 205 PG---YTGDKGRAGPAGPSGTPGSNGRPGPDGRKGERGDIGFPGFPGPDGATGRPGRPGP 261

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           DG P   G  G  G  GP+G +G+ G  GV G
Sbjct: 262 DGRPANKGAAGPMGSAGPQGFKGQKGAAGVDG 293



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 87/183 (47%), Gaps = 25/183 (13%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGP 150
           +GF   T +    G  GP G  G  G  G  G KGERG+ G PG  GP         PGP
Sbjct: 202 RGFPGYTGDKGRAGPAGPSGTPGSNGRPGPDGRKGERGDIGFPGFPGPDGATGRPGRPGP 261

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIGLDGRDGLPGE 204
            G P ++G  GP   MG  GPQG  G +G  G       KG  G  G  GLDGRDG  G 
Sbjct: 262 DGRPANKGAAGP---MGSAGPQGFKGQKGAAGVDGNDNSKGATGPRGETGLDGRDGTDGP 318

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM-------TGPRGNRGKSGING 257
            G  G  G  G+ G  GKD   G++G+ G  G  G KG+        GP G RG+ GI G
Sbjct: 319 TGPRGDAGFKGVKGRKGKDAAKGQNGVDGLKGQTGLKGLRGDDARSQGPIGPRGEPGIKG 378

Query: 258 VPG 260
            PG
Sbjct: 379 QPG 381



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 74/143 (51%), Gaps = 21/143 (14%)

Query: 112 PGLQGPIGQKG---------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           PG  GP G KG         +I   G+ G+ G  GE+G PG  G  G +G+PG +G +G 
Sbjct: 552 PGFVGPAGNKGITGRPGRDGDIMPDGDKGLPGPSGERGLPGDKGDDGARGLPGFDGPKGI 611

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP----------- 211
           KG +G PG  G PG +G +G  G MG PGR   DG  G PG    DG+P           
Sbjct: 612 KGRVGIPGRDGTPGRDGAKGQPGAMGQPGRDAEDGAKGQPGSNAEDGLPGPAGDAGRVGP 671

Query: 212 -GRNGMDGIPGKDGLPGKDGIPG 233
            GR GMDG+ G+ G PG  G+ G
Sbjct: 672 KGRKGMDGLDGQPGAPGAKGVSG 694



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 101/212 (47%), Gaps = 52/212 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------GK 159
           PG +G  G+ G  G+ G  G KG RG++G PG  G  G  G PG              G+
Sbjct: 428 PGAKGRAGEPGLDGSDGRDGSKGARGDRGFPGFTGDKGEAGTPGRNGDDGDNGLDGRPGR 487

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGD-MGYPGRI------------------GLDGRDG 200
           +GPKG   + G  G+ GD G +GPKGD  G  GR+                  G+ GRDG
Sbjct: 488 QGPKG---FKGLTGVNGDSGPQGPKGDDGGAKGRMGVDGDGGDKGYKGRDANNGVKGRDG 544

Query: 201 LPGE---PGLDGIPGRNGMDGIPGKD---------GLP---GKDGIPGTNGTNGEKGM-- 243
            PGE   PG  G  G  G+ G PG+D         GLP   G+ G+PG  G +G +G+  
Sbjct: 545 QPGEDGLPGFVGPAGNKGITGRPGRDGDIMPDGDKGLPGPSGERGLPGDKGDDGARGLPG 604

Query: 244 -TGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
             GP+G +G+ GI G  GTP     K +  ++
Sbjct: 605 FDGPKGIKGRVGIPGRDGTPGRDGAKGQPGAM 636



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 83/188 (44%), Gaps = 47/188 (25%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM------------------GVKG---ERGE 138
           +GF   T      G QGP G  G  GAKG M                  GVKG   + GE
Sbjct: 491 KGFKGLTGVNGDSGPQGPKGDDG--GAKGRMGVDGDGGDKGYKGRDANNGVKGRDGQPGE 548

Query: 139 KGAPGVVGPPGPQGIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
            G PG VGP G +GI G  G+ G   P GD G PGP G            + G PG  G 
Sbjct: 549 DGLPGFVGPAGNKGITGRPGRDGDIMPDGDKGLPGPSG------------ERGLPGDKGD 596

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           DG  GLPG  G  GI GR G         +PG+DG PG +G  G+ G  G  G   + G 
Sbjct: 597 DGARGLPGFDGPKGIKGRVG---------IPGRDGTPGRDGAKGQPGAMGQPGRDAEDGA 647

Query: 256 NGVPGTPA 263
            G PG+ A
Sbjct: 648 KGQPGSNA 655



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 54/102 (52%), Gaps = 9/102 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G KG +G  G  G  G  G KG PG +G PG     G +G+ G   + G PGP
Sbjct: 603 PGFDGPKGIKGRVGIPGRDGTPGRDGAKGQPGAMGQPGRDAEDGAKGQPGSNAEDGLPGP 662

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G   D G+ GPK      GR G+DG DG PG PG  G+ GR
Sbjct: 663 AG---DAGRVGPK------GRKGMDGLDGQPGAPGAKGVSGR 695



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 88/188 (46%), Gaps = 43/188 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGK-RGPKGDMGY 168
           G  GP G +G+ G KG  G KG+   +G+ G  G+ G  G +G+ GD+ + +GP G  G 
Sbjct: 314 GTDGPTGPRGDAGFKGVKGRKGKDAAKGQNGVDGLKGQTGLKGLRGDDARSQGPIGPRGE 373

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGL---------------------DGRDGLPG---- 203
           PG +G PG  G+ GP+G  G  GR G                      DG  G+PG    
Sbjct: 374 PGIKGQPGPAGRTGPQGAKGTKGRSGFPGFKGAMGPDGDDGADGVPGTDGDKGMPGAKGR 433

Query: 204 --EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------------GMTGPRGN 249
             EPGLDG  GR+G  G  G  G PG  G  G  GT G              G  GP+G 
Sbjct: 434 AGEPGLDGSDGRDGSKGARGDRGFPGFTGDKGEAGTPGRNGDDGDNGLDGRPGRQGPKGF 493

Query: 250 RGKSGING 257
           +G +G+NG
Sbjct: 494 KGLTGVNG 501



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 80/175 (45%), Gaps = 40/175 (22%)

Query: 119 GQKGEIGAKGEMGVKGERGE----------KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           GQ G  G KG+ G+KG RG+          +G PG+ G PGP G  G +G +G KG  G+
Sbjct: 341 GQNGVDGLKGQTGLKGLRGDDARSQGPIGPRGEPGIKGQPGPAGRTGPQGAKGTKGRSGF 400

Query: 169 PGPQGI---------------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG- 212
           PG +G                 GD+G  G KG  G PG  G DGRDG  G  G  G PG 
Sbjct: 401 PGFKGAMGPDGDDGADGVPGTDGDKGMPGAKGRAGEPGLDGSDGRDGSKGARGDRGFPGF 460

Query: 213 --RNGMDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               G  G PG++            G  G  G  G  G NG+ G  GP+G+ G +
Sbjct: 461 TGDKGEAGTPGRNGDDGDNGLDGRPGRQGPKGFKGLTGVNGDSGPQGPKGDDGGA 515


>gi|354483744|ref|XP_003504052.1| PREDICTED: collagen alpha-1(X) chain [Cricetulus griseus]
          Length = 680

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 89/190 (46%), Gaps = 47/190 (24%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-----------------PQGIPGDEGKR 160
           IG+ G  G  G+ G+ GE+G  GAPG+ GPPG                 P G+PG  G +
Sbjct: 263 IGKPGAAGTPGQPGIPGEKGHPGAPGIAGPPGAPGFGKPGLPGLRGQRGPAGLPGAPGAK 322

Query: 161 GPKGDMGYPG---------------PQGIPGDEGKRGPKGDM------------GYPGRI 193
           G +G  G+PG               P+GIPG+ G  G KG+             G  G  
Sbjct: 323 GEQGPAGHPGEAGLTGSPGNMGPQGPKGIPGNHGVPGAKGEAGPIGPVGPPGARGARGPP 382

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           GLDG+ G PGEPGL+   G  G  G+PG  G PG  G PG  G  G  G  G  G+ G++
Sbjct: 383 GLDGKTGYPGEPGLN---GPKGNPGLPGPKGDPGVGGAPGLQGPVGPTGAKGMPGHNGEA 439

Query: 254 GINGVPGTPA 263
           G  G PG P 
Sbjct: 440 GPRGEPGKPG 449



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 81/144 (56%), Gaps = 6/144 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GP G  G  GAKGE G  G  GE G   +PG +GP GP+GIPG+ G  G KG+ G  
Sbjct: 308 GQRGPAGLPGAPGAKGEQGPAGHPGEAGLTGSPGNMGPQGPKGIPGNHGVPGAKGEAGPI 367

Query: 170 GPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GP G PG  G RGP G     GYPG  GL+G  G PG PG  G PG  G  G+ G  G  
Sbjct: 368 GPVGPPGARGARGPPGLDGKTGYPGEPGLNGPKGNPGLPGPKGDPGVGGAPGLQGPVGPT 427

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G+PG NG  G +G  G  G+R
Sbjct: 428 GAKGMPGHNGEAGPRGEPGKPGSR 451



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 87/206 (42%), Gaps = 53/206 (25%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG--IPGDEGKRGP-------------- 162
           GQ+G  GA G  G  GE+G  GAPGV G  G  G   PG  G+RG               
Sbjct: 159 GQQGLTGAPGPRGFPGEKGASGAPGVNGQKGETGYGAPGRPGERGLPGPQGPIGPPGPPG 218

Query: 163 ---KGDMGYPGPQGIPGDEG-----------------------KRGPKGDMGYPGRIGLD 196
              +G+ G+PG  GI GD G                         G  G  G PG+ G+ 
Sbjct: 219 VGRRGENGFPGQPGIKGDRGFPGERGPSGPPGPQGPPGKQGREGIGKPGAAGTPGQPGIP 278

Query: 197 GRDGLPGEPGLDGIPGRNGMD--GIPGKDGLPGKDGIPGTNGTNGEKG---------MTG 245
           G  G PG PG+ G PG  G    G+PG  G  G  G+PG  G  GE+G         +TG
Sbjct: 279 GEKGHPGAPGIAGPPGAPGFGKPGLPGLRGQRGPAGLPGAPGAKGEQGPAGHPGEAGLTG 338

Query: 246 PRGNRGKSGINGVPGTPAICAYKRES 271
             GN G  G  G+PG   +   K E+
Sbjct: 339 SPGNMGPQGPKGIPGNHGVPGAKGEA 364



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 37/71 (52%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPGL G  G  GE G  G  G  G  G KG PGV G PG QG  G  G +G  G  G  G
Sbjct: 381 PPGLDGKTGYPGEPGLNGPKGNPGLPGPKGDPGVGGAPGLQGPVGPTGAKGMPGHNGEAG 440

Query: 171 PQGIPGDEGKR 181
           P+G PG  G R
Sbjct: 441 PRGEPGKPGSR 451



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 78/219 (35%), Gaps = 102/219 (46%)

Query: 144 VVGPPGPQGIPGDEGKRGP---KGDM---------------------------------- 166
             G PG  G+PG  G+RGP   KGD+                                  
Sbjct: 104 ATGKPGLPGLPGKPGERGPHGHKGDIGPAGLPGPRGPPGPPGIPGPAGISVSGKPGQQGL 163

Query: 167 -GYPGPQGIPGDEGKRGP------KGDMGY--PGRIG--------------------LDG 197
            G PGP+G PG++G  G       KG+ GY  PGR G                      G
Sbjct: 164 TGAPGPRGFPGEKGASGAPGVNGQKGETGYGAPGRPGERGLPGPQGPIGPPGPPGVGRRG 223

Query: 198 RDGLPGEPGLDGIPG---------------------RNGMDGIPGKDGLPGKDGIPGTNG 236
            +G PG+PG+ G  G                     R G+ G PG  G PG+ GIPG  G
Sbjct: 224 ENGFPGQPGIKGDRGFPGERGPSGPPGPQGPPGKQGREGI-GKPGAAGTPGQPGIPGEKG 282

Query: 237 TNGEKGMTGP--------------RGNRGKSGINGVPGT 261
             G  G+ GP              RG RG +G+ G PG 
Sbjct: 283 HPGAPGIAGPPGAPGFGKPGLPGLRGQRGPAGLPGAPGA 321


>gi|240848597|ref|NP_001155871.1| collagen alpha-1(IV) chain precursor [Gallus gallus]
          Length = 1669

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/163 (43%), Positives = 87/163 (53%), Gaps = 16/163 (9%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
            QKG +G   EMG+ G  GEKG PG+ G PG  G PG +G++G KG  G+PG  G PG  G
Sbjct: 1009 QKGSVG---EMGLPGTPGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPG-IGFPGSPG 1064

Query: 180  KRGPKGDMGYP---------GRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPG 227
            ++G  G  G P         G  G+ G  G P   G PG+ G PG  G+ G  G+ GLPG
Sbjct: 1065 EKGEPGRTGSPGLSGDKGEKGNAGIPGMPGAPGPKGSPGIAGFPGNPGLHGAKGEKGLPG 1124

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
              GIPG  G  GE G+ GP G+ G+ G  G  G P     K E
Sbjct: 1125 LSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGTAGAKGE 1167



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 93/189 (49%), Gaps = 15/189 (7%)

Query: 112  PGLQGPIGQKGEIGAKG--EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            PG  G  G+KG+ GA G   +G  G  GEKG PG  G PG  G  G++G  G  G  G P
Sbjct: 1037 PGFPGQKGEKGDKGAAGFPGIGFPGSPGEKGEPGRTGSPGLSGDKGEKGNAGIPGMPGAP 1096

Query: 170  GPQG------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            GP+G       PG+ G  G KG+ G PG  G+ G  G PGEPG+ G  G  G  G PG D
Sbjct: 1097 GPKGSPGIAGFPGNPGLHGAKGEKGLPGLSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYD 1156

Query: 224  GLP------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
            G+P      G+ G+PG  G  G  G  G +G +G+ G  G PG P I   K E     P 
Sbjct: 1157 GIPGTAGAKGEQGVPG-RGVPGYPGAKGDKGAKGEVGFPGSPGIPGIPGLKGEQGYAGPP 1215

Query: 278  SETSQLLIP 286
                   +P
Sbjct: 1216 GPKGNQGLP 1224



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 92/168 (54%), Gaps = 22/168 (13%)

Query: 113 GLQGPIGQKGEIGAKG---------EMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKR 160
           G QGP G+KGE G +G          M  KG    +GEKG PG  G  G  G+PG  G R
Sbjct: 213 GFQGPKGEKGEQGVQGPPGPPGPAPHMKEKGSEIIKGEKGEPGEKGEQGVPGLPGS-GYR 271

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G KG+ G PGP+G PG +G+ GPKG+ G PG  G+ GR   PGEPG  G  G  G  G P
Sbjct: 272 GEKGEPGKPGPRGKPGKDGEPGPKGEPGLPGGFGIPGR---PGEPGAKGEKGDQGPQGPP 328

Query: 221 GK--DGLP----GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           G+  D  P    G+ G PG +G  G KG  G +G  G  GI G+PG P
Sbjct: 329 GRIIDAGPIDTFGEKGDPGVSGLPGLKGQKGEKGFPGAQGIPGIPGRP 376



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 89/172 (51%), Gaps = 23/172 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG---------APGVVGPPGPQGIPGDEGKRGPK 163
            G  G  G+KGE G  G  G+ G++GEKG         APG  G PG  G PG+ G  G K
Sbjct: 1058 GFPGSPGEKGEPGRTGSPGLSGDKGEKGNAGIPGMPGAPGPKGSPGIAGFPGNPGLHGAK 1117

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGL---DGIPGRN--- 214
            G+ G PG  GIPG +G+ G  G  G  G IG  G    DG+PG  G     G+PGR    
Sbjct: 1118 GEKGLPGLSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGTAGAKGEQGVPGRGVPG 1177

Query: 215  -----GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                 G  G  G+ G PG  GIPG  G  GE+G  GP G +G  G+ G+PG+
Sbjct: 1178 YPGAKGDKGAKGEVGFPGSPGIPGIPGLKGEQGYAGPPGPKGNQGLPGLPGS 1229



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/218 (36%), Positives = 98/218 (44%), Gaps = 59/218 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDEGKRGP 162
            PG +G  G KG +G +GE GVKG++GE G PG+ G           G +G PG++G  GP
Sbjct: 902  PGEKGSQGLKGVVGPQGEPGVKGDKGEAGLPGIPGSMDTMDMVSLKGQKGDPGEKGDLGP 961

Query: 163  KGDMGY---------PGPQGIPGDEGKRGPKGD---------------------MGYPGR 192
             G+ G          PG  G PG  G+ GPKGD                     MG PG 
Sbjct: 962  TGEKGLRGEYGEPGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPGT 1021

Query: 193  IGLDGRDGLPGEPGLDGIPGRN--------------GMDGIPGKDGLPGKDGIPGTNGTN 238
             G  G  G+PG PG  G PG+               G  G PG+ G PG+ G PG +G  
Sbjct: 1022 PGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPGIGFPGSPGEKGEPGRTGSPGLSGDK 1081

Query: 239  GEK------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            GEK      GM G  G +G  GI G PG P +   K E
Sbjct: 1082 GEKGNAGIPGMPGAPGPKGSPGIAGFPGNPGLHGAKGE 1119



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 96/192 (50%), Gaps = 42/192 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGY 168
            PG QG +G KG  GAKGEMGV G       PG+ G PGP   +G+PG++G +G KG +  
Sbjct: 863  PGPQGSVGLKGSAGAKGEMGVMG------TPGLPGTPGPVGDRGLPGEKGSQGLKGVV-- 914

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             GPQG PG +G +G  G  G PG       + L G+ G PGE G  G  G  G+ G  G+
Sbjct: 915  -GPQGEPGVKGDKGEAGLPGIPGSMDTMDMVSLKGQKGDPGEKGDLGPTGEKGLRGEYGE 973

Query: 223  DGLPGKDGIPGT------------------------NGTNGEKGMTGPRGNRGKSGINGV 258
             G+PG+DG PGT                         G+ GE G+ G  G +G  GI G 
Sbjct: 974  PGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPGTPGEKGLPGIPGS 1033

Query: 259  PGTPAICAYKRE 270
            PGTP     K E
Sbjct: 1034 PGTPGFPGQKGE 1045



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 90/183 (49%), Gaps = 35/183 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG-------------- 158
            G +G  G+KG++G  GE G++GE GE G PG  G PG  G PG +G              
Sbjct: 948  GQKGDPGEKGDLGPTGEKGLRGEYGEPGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGIP 1007

Query: 159  -KRGPKGDMGYPG------------PQGIPGDEGKRGPKGD--------MGYPGRIGLDG 197
             ++G  G+MG PG              G PG  G++G KGD        +G+PG  G  G
Sbjct: 1008 GQKGSVGEMGLPGTPGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPGIGFPGSPGEKG 1067

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G  G PGL G  G  G  GIPG  G PG  G PG  G  G  G+ G +G +G  G++G
Sbjct: 1068 EPGRTGSPGLSGDKGEKGNAGIPGMPGAPGPKGSPGIAGFPGNPGLHGAKGEKGLPGLSG 1127

Query: 258  VPG 260
            +PG
Sbjct: 1128 IPG 1130



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 78/149 (52%), Gaps = 27/149 (18%)

Query: 119 GQKGEIGAKGEMGV--------KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           G+KGE G KGE GV        +GE+GE G PG  G PG  G PG +G+ G  G  G PG
Sbjct: 249 GEKGEPGEKGEQGVPGLPGSGYRGEKGEPGKPGPRGKPGKDGEPGPKGEPGLPGGFGIPG 308

Query: 171 PQGIPGDEGKRGPKGDMGYPGRI---------------GLDGRDGLPGEPGLDGIPGRNG 215
             G PG +G++G +G  G PGRI               G+ G  GL G+ G  G PG  G
Sbjct: 309 RPGEPGAKGEKGDQGPQGPPGRIIDAGPIDTFGEKGDPGVSGLPGLKGQKGEKGFPGAQG 368

Query: 216 MDGIPGKDGLP---GKDGIPGTNGTNGEK 241
           + GIPG+  +P   G  G+PG  G  GEK
Sbjct: 369 IPGIPGRP-VPDMVGSPGVPGQRGEKGEK 396



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 87/192 (45%), Gaps = 42/192 (21%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPK 184
           G  G +G+KG PGV G PGP+G+PG  G  G  G+ G P      G QG PG  G++G +
Sbjct: 723 GTPGLQGQKGEPGV-GLPGPKGLPGIPGPAGIPGEKGNPGLPGLRGEQGFPGVPGQQGFR 781

Query: 185 GDMGYPGRIGL--------------------------------DGRDGLPGEPGLDGIPG 212
           GD G PG  GL                                 G  G PG PGLD +PG
Sbjct: 782 GDPGLPGLQGLPGPQGSPGVGPPGLPGPAGQPGPEGPPGFPGIKGERGFPGIPGLD-MPG 840

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
             G  G  G+ G+PG  G+PG  G  G  G+ G  G +G+ G+ G PG P       +  
Sbjct: 841 PKGDKGSQGQPGVPGSVGLPGLPGPQGSVGLKGSAGAKGEMGVMGTPGLPGTPGPVGDRG 900

Query: 273 SLLPNSETSQLL 284
             LP  + SQ L
Sbjct: 901 --LPGEKGSQGL 910



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/124 (46%), Positives = 68/124 (54%), Gaps = 14/124 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGD 165
            PGL G  G+KG  G  G  G+KGE GE G PG  G       PG  GIPG  G    KG+
Sbjct: 1111 PGLHGAKGEKGLPGLSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGTAGA---KGE 1167

Query: 166  MGYPGPQ--GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
             G PG    G PG +G +G KG++G+PG  G+ G  GL GE G  G PG  G  G+P   
Sbjct: 1168 QGVPGRGVPGYPGAKGDKGAKGEVGFPGSPGIPGIPGLKGEQGYAGPPGPKGNQGLP--- 1224

Query: 224  GLPG 227
            GLPG
Sbjct: 1225 GLPG 1228



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 78/151 (51%), Gaps = 15/151 (9%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G KG+ G +G+ G  G+ G+ G PGPQG  G +G  G KG+MG     G PG  G  GP 
Sbjct: 840 GPKGDKGSQGQPGVPGSVGLPGLPGPQGSVGLKGSAGAKGEMGV---MGTPGLPGTPGPV 896

Query: 185 GDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTN 235
           GD G PG  G  G  G+    GEPG+ G  G  G+ GIPG         L G+ G PG  
Sbjct: 897 GDRGLPGEKGSQGLKGVVGPQGEPGVKGDKGEAGLPGIPGSMDTMDMVSLKGQKGDPGEK 956

Query: 236 ---GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G  GEKG+ G  G  G  G +G PGTP 
Sbjct: 957 GDLGPTGEKGLRGEYGEPGIPGRDGEPGTPG 987



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 92/195 (47%), Gaps = 45/195 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
           PG+ GP G  GE   KG  G+ G RGE+G PGV   PG QG  GD G  G          
Sbjct: 745 PGIPGPAGIPGE---KGNPGLPGLRGEQGFPGV---PGQQGFRGDPGLPGLQGLPGPQGS 798

Query: 163 --------------------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                                     KG+ G+PG   IPG +   GPKGD G  G+ G+ 
Sbjct: 799 PGVGPPGLPGPAGQPGPEGPPGFPGIKGERGFPG---IPGLD-MPGPKGDKGSQGQPGVP 854

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  GLPG PG  G  G  G  G  G+ G+ G  G+PGT G  G++G+ G +G++G  G+ 
Sbjct: 855 GSVGLPGLPGPQGSVGLKGSAGAKGEMGVMGTPGLPGTPGPVGDRGLPGEKGSQGLKGVV 914

Query: 257 GVPGTPAICAYKRES 271
           G  G P +   K E+
Sbjct: 915 GPQGEPGVKGDKGEA 929



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 57/114 (50%), Gaps = 13/114 (11%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L  + G      E   PG  G IGQKGE G     G  G KGE+G  G        G  G
Sbjct: 1125 LSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGTAGAKGEQGVPGR-------GVPG 1177

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             PG +G +G KG++G+PG  GIPG  G    KG+ GY G  G  G  GLPG PG
Sbjct: 1178 YPGAKGDKGAKGEVGFPGSPGIPGIPGL---KGEQGYAGPPGPKGNQGLPGLPG 1228



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 47/108 (43%), Gaps = 29/108 (26%)

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------------- 241
           L G  G PG PG  GIPGR   +G PGKDGLPG  G  G +GT G K             
Sbjct: 539 LKGEKGDPGFPGQPGIPGR---EGTPGKDGLPGPQGPKGASGTAGLKGERGPPGQPGFPG 595

Query: 242 -------------GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
                        G  G  G++G+ G  G PG P +   K E+   +P
Sbjct: 596 VRGERGLPGSPGVGTAGLPGDKGERGFAGTPGLPGLPGTKGEAGRTVP 643



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 71/154 (46%), Gaps = 41/154 (26%)

Query: 128 GEMGVKGERGEKG------------APGVVGPPGPQGIPG----DEGKRGPKGDMGYPGP 171
           G+ G KG+RG  G            APG++G PG +G PG    D   +G KGD G+PG 
Sbjct: 492 GQSGFKGDRGLPGLDGLPGVPGPPGAPGLIGLPGAKGEPGDFTYDSILKGEKGDPGFPGQ 551

Query: 172 QGIPGDEGK------RGPKGDMGYPGRIGLD---------------GRDGLPGEPGLDGI 210
            GIPG EG        GP+G  G  G  GL                G  GLPG PG+   
Sbjct: 552 PGIPGREGTPGKDGLPGPQGPKGASGTAGLKGERGPPGQPGFPGVRGERGLPGSPGV--- 608

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G+ G  G+ G  G  G+PG  GT GE G T
Sbjct: 609 -GTAGLPGDKGERGFAGTPGLPGLPGTKGEAGRT 641


>gi|357606659|gb|EHJ65157.1| hypothetical protein KGM_03021 [Danaus plexippus]
          Length = 1912

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 124/304 (40%), Gaps = 100/304 (32%)

Query: 31   NVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNA 90
             +S +  + +  D+G+  D      P ++  P     E++ R K ++     NP V    
Sbjct: 851  GMSIKGEKGISGDQGEKGDKGFSGRPGLKGEPGQCPNELKIRTKGEKG----NPGV---- 902

Query: 91   YSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
                                 PG QGP+G KGE G +G  G  G +GE G PG  GP GP
Sbjct: 903  ---------------------PGPQGPLGMKGEKGNQGPFGFTGPKGEMGLPGRAGPVGP 941

Query: 151  QGIPGDEGKRGPKGDMGYP----------------------------------------- 169
            +G+PG +G +G  G MG+P                                         
Sbjct: 942  RGLPGFKGDKGEMGSMGFPGTPGDLGPRGFPGLPGLKGDKGEIGPSMPGPPGPAGLKGDK 1001

Query: 170  ---GPQGIPGDEGKRGP---------KGDM------GYPGRIGLDGRDGLPGEPGLDGIP 211
               GP+G PG EGK GP         KGDM      GYPG IGL G  G  G  G+ GIP
Sbjct: 1002 GEQGPRGQPGIEGKDGPPGLAGLQGEKGDMGLIGRQGYPGPIGLKGEPGPIGPSGVPGIP 1061

Query: 212  GRNGMDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            G  G DG  G+             GLPG+ G PG  G +G KG  GPRG+ G  G  G+ 
Sbjct: 1062 GTPGRDGPKGQQGFPGPPGKPGVIGLPGQKGEPGIQGPDGPKGFPGPRGHVGMQGQTGLD 1121

Query: 260  GTPA 263
            G+P 
Sbjct: 1122 GSPG 1125



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/156 (47%), Positives = 90/156 (57%), Gaps = 25/156 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G +G IG KG  G KGE G+  E+GEKG  G  G PG  G PG +G++G KG  GYPG
Sbjct: 1174 PAGPRGDIGFKGSRGPKGEPGLASEKGEKGDQGFPGLPGVDGRPGQDGEKGDKGFPGYPG 1233

Query: 171  PQGIPGDEGKRGP---------------KGDMGYPGRIGLDG------RDGLPGEPGLDG 209
             QGIPG +G++G                KGD G+PG  GL G      +DGLPG PG DG
Sbjct: 1234 -QGIPGSQGEKGDAGLPGKMGFPGIPGDKGDRGFPGLAGLKGERGPAGKDGLPGMPGRDG 1292

Query: 210  IPGRNGMDGIPGKDGLPGK---DGIPGTNGTNGEKG 242
             PG  G DG+PG DG  G+    G+PG +G +G KG
Sbjct: 1293 SPGAPGQDGLPGMDGEKGERGDRGLPGRDGLDGLKG 1328



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 93/184 (50%), Gaps = 24/184 (13%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---- 166
            PPGL G  G+KG++G  G  G  G  G KG PG +GP G  GIPG  G+ GPKG      
Sbjct: 1018 PPGLAGLQGEKGDMGLIGRQGYPGPIGLKGEPGPIGPSGVPGIPGTPGRDGPKGQQGFPG 1077

Query: 167  --------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------GLDG 209
                    G PG +G PG +G  GPKG  G  G +G+ G+ GL G P         G  G
Sbjct: 1078 PPGKPGVIGLPGQKGEPGIQGPDGPKGFPGPRGHVGMQGQTGLDGSPGEKGDKGDIGFPG 1137

Query: 210  IPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             PGR G+DG  G  G PG+    G PG  G NG  G  GPRG+ G  G  G  G P + +
Sbjct: 1138 EPGRPGLDGPRGLAGAPGEKGDIGFPGNPGLNGFIGPAGPRGDIGFKGSRGPKGEPGLAS 1197

Query: 267  YKRE 270
             K E
Sbjct: 1198 EKGE 1201



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/166 (45%), Positives = 90/166 (54%), Gaps = 25/166 (15%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGPQGIP 154
            GF  S      PGL    G+KG+ G  G  GV       GE+G+KG PG  G    QGIP
Sbjct: 1182 GFKGSRGPKGEPGLASEKGEKGDQGFPGLPGVDGRPGQDGEKGDKGFPGYPG----QGIP 1237

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G +G+   KGD G PG  G PG  G    KGD G+PG  GL G  G  G+ GL G+PGR+
Sbjct: 1238 GSQGE---KGDAGLPGKMGFPGIPGD---KGDRGFPGLAGLKGERGPAGKDGLPGMPGRD 1291

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G PG+DGLPG D         GEKG  G RG  G+ G++G+ G
Sbjct: 1292 GSPGAPGQDGLPGMD---------GEKGERGDRGLPGRDGLDGLKG 1328



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/194 (39%), Positives = 103/194 (53%), Gaps = 35/194 (18%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---------EKGAPGVVGPPG 149
           + G CN     C PG    +G+KG+ GA G  G +GERG         E+GA G+ G PG
Sbjct: 700 IGGRCNE----CRPGS---MGEKGDRGADGLPGERGERGHIGPIGMTGERGADGMNGMPG 752

Query: 150 PQGIPGDEGKRGPKGDMGY---------------PGPQGIPGDEGKRGPKGDMGYPGRIG 194
             G PG+ G  GP G  G                PG +G PG++G  GPKG+ G  G +G
Sbjct: 753 AAGAPGERGLDGPIGPPGMRGADAMIPSNLVKGPPGERGEPGEKGNMGPKGERGPDGIMG 812

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G +G+PG+ G  G  G +G+DG PG DG+PG+ G+ G +   GEKG++G +G +G  G
Sbjct: 813 DRGLNGMPGQKGDMGRMGPSGIDGTPGSDGIPGRPGMKGMS-IKGEKGISGDQGEKGDKG 871

Query: 255 INGVP---GTPAIC 265
            +G P   G P  C
Sbjct: 872 FSGRPGLKGEPGQC 885



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 87/156 (55%), Gaps = 18/156 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G++GP GQKGE G  G  G+ GE G++G  G +GP GP+G+ G+EG+  P GD G  G  
Sbjct: 580 GIEGPAGQKGEKGEPGLDGLPGEIGQRGYDGPIGPQGPRGLKGEEGQSIP-GDKGNSGQP 638

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           GIPGD+G    KG+ GYPG  G  G    G PG PG  G PG  G      + G PG DG
Sbjct: 639 GIPGDKGA---KGERGYPGLRGTPGNSTLGTPGSPGEMGPPGEKG------EKGTPGYDG 689

Query: 231 IPGTNGTNGEKG------MTGPRGNRGKSGINGVPG 260
           IPG  G  G+ G        G  G +G  G +G+PG
Sbjct: 690 IPGNPGQKGDIGGRCNECRPGSMGEKGDRGADGLPG 725



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 89/172 (51%), Gaps = 26/172 (15%)

Query: 112 PGLQGPIGQK--GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPK 163
           PGL+G  G    G  G+ GEMG  GE+GEKG PG  G PG  G  GD G R      G  
Sbjct: 653 PGLRGTPGNSTLGTPGSPGEMGPPGEKGEKGTPGYDGIPGNPGQKGDIGGRCNECRPGSM 712

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G  G  G+PG+ G+RG  G +G  G  G DG +G+PG     G PG  G+DG  G  
Sbjct: 713 GEKGDRGADGLPGERGERGHIGPIGMTGERGADGMNGMPG---AAGAPGERGLDGPIGPP 769

Query: 224 GLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGI------NGVPG 260
           G+ G D         G PG  G  GEKG  GP+G RG  GI      NG+PG
Sbjct: 770 GMRGADAMIPSNLVKGPPGERGEPGEKGNMGPKGERGPDGIMGDRGLNGMPG 821



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 82/150 (54%), Gaps = 10/150 (6%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGYPGPQGIPGDEGK 180
           IG  G  G  G  GE G PG +GP G QG PGD G  GP   KG+ G PG  G+PG+ G+
Sbjct: 546 IGVAGAPGSSGRPGENGLPGPMGPRGGQGEPGDTGIEGPAGQKGEKGEPGLDGLPGEIGQ 605

Query: 181 RGPKGDMGYPGRIGLDGRDG--LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP-----G 233
           RG  G +G  G  GL G +G  +PG+ G  G PG  G  G  G+ G PG  G P     G
Sbjct: 606 RGYDGPIGPQGPRGLKGEEGQSIPGDKGNSGQPGIPGDKGAKGERGYPGLRGTPGNSTLG 665

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           T G+ GE G  G +G +G  G +G+PG P 
Sbjct: 666 TPGSPGEMGPPGEKGEKGTPGYDGIPGNPG 695



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 84/173 (48%), Gaps = 23/173 (13%)

Query: 121 KGEI-GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           KG I G KG+MG KGE+GE G  G  G  GP G PG  G  G KG+ G  G  G  G EG
Sbjct: 418 KGAIKGVKGDMGSKGEKGEPGRMGEKGETGPMGEPGLPGLMGIKGEKGLRGNPGERGREG 477

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP------------- 226
             G  G MG  G  G+DG +GLPG PGL G PGR+G  G+ G  G+P             
Sbjct: 478 MYGEPGPMGRKGDRGIDGLNGLPGRPGLKGEPGRDGATGLMGLKGVPGPPGGRAGARGPP 537

Query: 227 ---------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                    G  G PG++G  GE G+ GP G RG  G  G  G       K E
Sbjct: 538 GPPGPRGYIGVAGAPGSSGRPGENGLPGPMGPRGGQGEPGDTGIEGPAGQKGE 590



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 98/198 (49%), Gaps = 32/198 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGE------------RGEKGAPGVVGPPGPQGIPGDEGKR 160
            G+ G  G+KG+ G  G  G+KGE            +GEKG PGV GP GP G+ G++G +
Sbjct: 859  GISGDQGEKGDKGFSGRPGLKGEPGQCPNELKIRTKGEKGNPGVPGPQGPLGMKGEKGNQ 918

Query: 161  GP------KGDMGYPG------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            GP      KG+MG PG      P+G+PG +G +G  G MG+PG  G  G  G PG PGL 
Sbjct: 919  GPFGFTGPKGEMGLPGRAGPVGPRGLPGFKGDKGEMGSMGFPGTPGDLGPRGFPGLPGLK 978

Query: 209  GIPGR--------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G          G  G+ G  G  G  G PG  G +G  G+ G +G +G  G+ G  G
Sbjct: 979  GDKGEIGPSMPGPPGPAGLKGDKGEQGPRGQPGIEGKDGPPGLAGLQGEKGDMGLIGRQG 1038

Query: 261  TPAICAYKRESCSLLPNS 278
             P     K E   + P+ 
Sbjct: 1039 YPGPIGLKGEPGPIGPSG 1056



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 102/226 (45%), Gaps = 74/226 (32%)

Query: 112  PGLQGPIGQK------------GEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGD 156
            PG  GP GQ+            G  G KGE G++G  G KG PG    VG  G  G+ G 
Sbjct: 1064 PGRDGPKGQQGFPGPPGKPGVIGLPGQKGEPGIQGPDGPKGFPGPRGHVGMQGQTGLDGS 1123

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKR------GPKGDMGYPGRIGLD-------------- 196
             G++G KGD+G+PG  G PG +G R      G KGD+G+PG  GL+              
Sbjct: 1124 PGEKGDKGDIGFPGEPGRPGLDGPRGLAGAPGEKGDIGFPGNPGLNGFIGPAGPRGDIGF 1183

Query: 197  -------------------GRDGLPGEPGLDGIPGRNG-----------MDGIPGKD--- 223
                               G  G PG PG+DG PG++G             GIPG     
Sbjct: 1184 KGSRGPKGEPGLASEKGEKGDQGFPGLPGVDGRPGQDGEKGDKGFPGYPGQGIPGSQGEK 1243

Query: 224  ---GLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
               GLPGK G PG  G  G++   G+ G +G RG +G +G+PG P 
Sbjct: 1244 GDAGLPGKMGFPGIPGDKGDRGFPGLAGLKGERGPAGKDGLPGMPG 1289



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 92/195 (47%), Gaps = 41/195 (21%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGV--KGERGEKGAPGV---------------VGPPG---P 150
           P G  GP G KG+ G    MG   KGE+GE GA G+                GP G   P
Sbjct: 311 PRGFAGPKGNKGDKGEPAYMGRYPKGEKGEPGADGLQGQSGPAGPTGPPGLAGPKGMTGP 370

Query: 151 QGIPGDEGKRGPKGDMGYP--GPQGIPGDEGKRGP-------------------KGDMGY 189
            G PG +G +GPKG  G    G +G  GD+G RGP                   KGDMG 
Sbjct: 371 MGPPGYKGDKGPKGSKGQSIQGDKGDRGDKGDRGPGCPSTTLPSLDNKGAIKGVKGDMGS 430

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G  G  GR G  GE G  G PG  G+ GI G+ GL G  G  G  G  GE G  G +G+
Sbjct: 431 KGEKGEPGRMGEKGETGPMGEPGLPGLMGIKGEKGLRGNPGERGREGMYGEPGPMGRKGD 490

Query: 250 RGKSGINGVPGTPAI 264
           RG  G+NG+PG P +
Sbjct: 491 RGIDGLNGLPGRPGL 505



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 86/196 (43%), Gaps = 48/196 (24%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GLQG  G +G  G KGEMG  G  GE+G     GP GP GIPG    +G KG  G  G  
Sbjct: 1389 GLQGEKGDQGFTGQKGEMGRMGAMGERGE---RGPIGPTGIPGLT-VKGEKGLPGNNGKH 1444

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------- 219
            G PG  G  G KG+ G PG  G  GR G+PG PG  G PG  G +G+             
Sbjct: 1445 GRPGMRGATGEKGEQGLPGLPGPIGRSGMPGTPGPRGEPGEPGSEGVAGPPGFDGPPGLQ 1504

Query: 220  ----------------------PGKDGLPGKDGIPGTNGTNGEK---------GMTGPRG 248
                                  PG  G  G  G+PG NG  G+K         G  G +G
Sbjct: 1505 GRPGEYGEKGNKGDKGAVGFGLPGPKGDTGLPGLPGLNGEKGDKGDQGFDGLVGEMGEKG 1564

Query: 249  NRGKSGINGVPGTPAI 264
            N+G+ G  G PG P I
Sbjct: 1565 NQGEKGDRGYPGRPGI 1580



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 108/243 (44%), Gaps = 56/243 (23%)

Query: 78   NSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG--------- 128
            N  H  P +   A        + G          PG  GP G+ GE G++G         
Sbjct: 1441 NGKHGRPGMR-GATGEKGEQGLPGLPGPIGRSGMPGTPGPRGEPGEPGSEGVAGPPGFDG 1499

Query: 129  ---------EMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGDMGYPGPQG 173
                     E G KG +G+KGA G  G PGP+G      +PG  G++G KGD G+ G  G
Sbjct: 1500 PPGLQGRPGEYGEKGNKGDKGAVGF-GLPGPKGDTGLPGLPGLNGEKGDKGDQGFDGLVG 1558

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG--------------------------L 207
              G++G +G KGD GYPGR G+ G DG+ G+ G                          L
Sbjct: 1559 EMGEKGNQGEKGDRGYPGRPGIPGLDGVKGDKGEAAAIVYGSKGEPGPRGPPGLNGPPGL 1618

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTP-A 263
            DG+PG  G DG PG  G  G  G  G  G  G +   G+ G RG  G+ G+ GVPG P A
Sbjct: 1619 DGLPGPKGWDGAPGMKGDKGFQGPMGPPGLPGPQGIMGIQGERGETGRMGLQGVPGIPGA 1678

Query: 264  ICA 266
             CA
Sbjct: 1679 PCA 1681



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 92/185 (49%), Gaps = 38/185 (20%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERG---------------EKGAPGVVGPPGPQGIPGDEG 158
           ++GP G++GE G KG MG KGERG               +KG  G +GP G  G PG +G
Sbjct: 783 VKGPPGERGEPGEKGNMGPKGERGPDGIMGDRGLNGMPGQKGDMGRMGPSGIDGTPGSDG 842

Query: 159 KRGPKG--DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG---------LPGEPGL 207
             G  G   M   G +GI GD+G+   KGD G+ GR GL G  G           GE G 
Sbjct: 843 IPGRPGMKGMSIKGEKGISGDQGE---KGDKGFSGRPGLKGEPGQCPNELKIRTKGEKGN 899

Query: 208 DGIPGRNGMDGIPGKD---------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G+PG  G  G+ G+          G  G+ G+PG  G  G +G+ G +G++G+ G  G 
Sbjct: 900 PGVPGPQGPLGMKGEKGNQGPFGFTGPKGEMGLPGRAGPVGPRGLPGFKGDKGEMGSMGF 959

Query: 259 PGTPA 263
           PGTP 
Sbjct: 960 PGTPG 964



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 91/208 (43%), Gaps = 58/208 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---- 168
           GL+G  G++G  G  GE G  G +G++G  G+ G PG  G+ G+ G+ G  G MG     
Sbjct: 465 GLRGNPGERGREGMYGEPGPMGRKGDRGIDGLNGLPGRPGLKGEPGRDGATGLMGLKGVP 524

Query: 169 ---------------------------PGPQGIPGDEG---KRGPKGDMGYPGRIGLDG- 197
                                      PG  G PG+ G     GP+G  G PG  G++G 
Sbjct: 525 GPPGGRAGARGPPGPPGPRGYIGVAGAPGSSGRPGENGLPGPMGPRGGQGEPGDTGIEGP 584

Query: 198 --RDGLPGEPGLDGIPGRNGMDG--------------------IPGKDGLPGKDGIPGTN 235
             + G  GEPGLDG+PG  G  G                    IPG  G  G+ GIPG  
Sbjct: 585 AGQKGEKGEPGLDGLPGEIGQRGYDGPIGPQGPRGLKGEEGQSIPGDKGNSGQPGIPGDK 644

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  GE+G  G RG  G S + G PG+P 
Sbjct: 645 GAKGERGYPGLRGTPGNSTL-GTPGSPG 671



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 88/197 (44%), Gaps = 52/197 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPK 163
            G+ G  G+KG+ G  G+MG   + G++G++G PG+ G      P G  G+PG  G+    
Sbjct: 1235 GIPGSQGEKGDAGLPGKMGFPGIPGDKGDRGFPGLAGLKGERGPAGKDGLPGMPGR---D 1291

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----------------------- 200
            G  G PG  G+PG +G++G +GD G PGR GLDG  G                       
Sbjct: 1292 GSPGAPGQDGLPGMDGEKGERGDRGLPGRDGLDGLKGDQGIAGPPGPIGPMGFPGPKGDI 1351

Query: 201  -LPGE-------------PGLDGI---PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             LPG              PG+ G+    G  G DG  G  G  G  G  G  G  G  G 
Sbjct: 1352 GLPGPSINIKGEKGDIGFPGITGLQGDKGDRGRDGFQGLQGEKGDQGFTGQKGEMGRMGA 1411

Query: 244  TGPRGNRGKSGINGVPG 260
             G RG RG  G  G+PG
Sbjct: 1412 MGERGERGPIGPTGIPG 1428



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 86/158 (54%), Gaps = 12/158 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMG--VKGERGEKGAPGVVGPPGPQG-IPGDEGK---RGPKGDM 166
           G  GP G KG+ G KG  G  ++G++G++G  G  GP  P   +P  + K   +G KGDM
Sbjct: 369 GPMGPPGYKGDKGPKGSKGQSIQGDKGDRGDKGDRGPGCPSTTLPSLDNKGAIKGVKGDM 428

Query: 167 GYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G +G PG   ++G+ GP G+ G PG +G+ G  GL G PG     GR GM G PG  
Sbjct: 429 GSKGEKGEPGRMGEKGETGPMGEPGLPGLMGIKGEKGLRGNPGER---GREGMYGEPGPM 485

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  GI G NG  G  G+ G  G  G +G+ G+ G 
Sbjct: 486 GRKGDRGIDGLNGLPGRPGLKGEPGRDGATGLMGLKGV 523



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 70/120 (58%), Gaps = 6/120 (5%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           E+G +G PG+ GPPG  G+PG  G  GP+G  G  G  G  G  G RG KG  G  G IG
Sbjct: 212 EKGSRGFPGMRGPPGITGLPGHVGAEGPQGLKGQKGQDGPQGPRGPRGEKGKPGAQGFIG 271

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           L G  G  GEPG+ GIPGR+G +G    DG PG  GI    G+ G +G  GP+GN+G  G
Sbjct: 272 LAGPPGPQGEPGMPGIPGRDGCNGT---DGEPGMVGI---KGSQGPRGFAGPKGNKGDKG 325



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 90/198 (45%), Gaps = 33/198 (16%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L  ++G      +   PG+ G  G  G  G  G  G+ GE+GE+G  G+ G  G  G+ G
Sbjct: 1269 LAGLKGERGPAGKDGLPGMPGRDGSPGAPGQDGLPGMDGEKGERGDRGLPGRDGLDGLKG 1328

Query: 156  DEGK----------------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
            D+G                             +G KGD+G+PG  G+ GD+G RG  G  
Sbjct: 1329 DQGIAGPPGPIGPMGFPGPKGDIGLPGPSINIKGEKGDIGFPGITGLQGDKGDRGRDGFQ 1388

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP-----GKDGIPGTNGTNGEKG 242
            G  G  G  G  G  GE G  G  G  G  G  G  G+P     G+ G+PG NG +G  G
Sbjct: 1389 GLQGEKGDQGFTGQKGEMGRMGAMGERGERGPIGPTGIPGLTVKGEKGLPGNNGKHGRPG 1448

Query: 243  MTGPRGNRGKSGINGVPG 260
            M G  G +G+ G+ G+PG
Sbjct: 1449 MRGATGEKGEQGLPGLPG 1466



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 89/208 (42%), Gaps = 60/208 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G++G +G KGE G  G MG KGE G   E G PG++G  G +G+ G+ G+RG +G  G P
Sbjct: 423 GVKGDMGSKGEKGEPGRMGEKGETGPMGEPGLPGLMGIKGEKGLRGNPGERGREGMYGEP 482

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---------------------------- 201
           GP G  GD G  G  G  G PG  G  GRDG                             
Sbjct: 483 GPMGRKGDRGIDGLNGLPGRPGLKGEPGRDGATGLMGLKGVPGPPGGRAGARGPPGPPGP 542

Query: 202 ------------PGEPGLDGIPG----RNGMD-----------GIPGKDGLPGKDGIPGT 234
                        G PG +G+PG    R G             G  G+ G PG DG+PG 
Sbjct: 543 RGYIGVAGAPGSSGRPGENGLPGPMGPRGGQGEPGDTGIEGPAGQKGEKGEPGLDGLPGE 602

Query: 235 NGTNGEKGMTGPRGNRGKSGING--VPG 260
            G  G  G  GP+G RG  G  G  +PG
Sbjct: 603 IGQRGYDGPIGPQGPRGLKGEEGQSIPG 630



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 75/145 (51%), Gaps = 18/145 (12%)

Query: 113  GLQGPI----GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            GL GP     G+KG+IG  G  G++G++G++G  G  G    QG  GD+G  G KG+MG 
Sbjct: 1352 GLPGPSINIKGEKGDIGFPGITGLQGDKGDRGRDGFQGL---QGEKGDQGFTGQKGEMGR 1408

Query: 169  PGPQGIPGDEGKRGPKGDMGYPG-----RIGLDGRDGLPGEPGLDGI---PGRNGMDGIP 220
                G  G+ G+RGP G  G PG       GL G +G  G PG+ G     G  G+ G+P
Sbjct: 1409 ---MGAMGERGERGPIGPTGIPGLTVKGEKGLPGNNGKHGRPGMRGATGEKGEQGLPGLP 1465

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTG 245
            G  G  G  G PG  G  GE G  G
Sbjct: 1466 GPIGRSGMPGTPGPRGEPGEPGSEG 1490



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 79/159 (49%), Gaps = 22/159 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------------PPGPQGIP 154
           G +GP G KG+ G  G  G +G RGEKG PG  G                   PG  G  
Sbjct: 235 GAEGPQGLKGQKGQDGPQGPRGPRGEKGKPGAQGFIGLAGPPGPQGEPGMPGIPGRDGCN 294

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G +G+ G  G  G  GP+G  G +G +G KG+  Y GR       G  GEPG DG+ G++
Sbjct: 295 GTDGEPGMVGIKGSQGPRGFAGPKGNKGDKGEPAYMGRY----PKGEKGEPGADGLQGQS 350

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G  G  GL G  G+ G  G  G KG  GP+G++G+S
Sbjct: 351 GPAGPTGPPGLAGPKGMTGPMGPPGYKGDKGPKGSKGQS 389


>gi|328782977|ref|XP_392097.4| PREDICTED: collagen alpha-1(IV) chain-like isoform 1 [Apis mellifera]
          Length = 1929

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 91/179 (50%), Gaps = 32/179 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PGL+G  G+KG+ G +G  G  GE+G+ GAPG VG PGP G+PG +G  GP+G  G PG 
Sbjct: 1385 PGLRGAPGEKGDRGLEGLSGYDGEKGDSGAPGPVGNPGPSGLPGAKGDEGPRGPTGVPGL 1444

Query: 171  ----PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP--------------------- 205
                 +G+PG  GK    G  G PGR G  G  GLPG P                     
Sbjct: 1445 TIKGEKGLPGMPGKH---GREGIPGRPGEKGEQGLPGLPGHKGERGPPGPVGLPGEKGDM 1501

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            GL G PG  G DG PG  G P   G+PG  G  GE G+ GP G  G+ G  G PG   I
Sbjct: 1502 GLMGPPGLTGRDGQPGVKGFP---GLPGERGEKGEAGLRGPPGPIGQKGEPGFPGPSGI 1557



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 103/223 (46%), Gaps = 57/223 (25%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP----------KGDMGYPG 170
            +GE+GA G  G+ G +G++G PG VG PG  G  G++G RGP          KG+ G PG
Sbjct: 1327 EGEMGAPGHPGIPGAKGDRGIPGAVGLPGIPGAIGEKGDRGPPGPTISIKGEKGEPGIPG 1386

Query: 171  PQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLP------------------- 202
             +G PG++G R         G KGD G PG +G  G  GLP                   
Sbjct: 1387 LRGAPGEKGDRGLEGLSGYDGEKGDSGAPGPVGNPGPSGLPGAKGDEGPRGPTGVPGLTI 1446

Query: 203  -GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---------------GMTGP 246
             GE GL G+PG++G +GIPG+ G  G+ G+PG  G  GE+               G+ GP
Sbjct: 1447 KGEKGLPGMPGKHGREGIPGRPGEKGEQGLPGLPGHKGERGPPGPVGLPGEKGDMGLMGP 1506

Query: 247  ---RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
                G  G+ G+ G PG P     K E+    P     Q   P
Sbjct: 1507 PGLTGRDGQPGVKGFPGLPGERGEKGEAGLRGPPGPIGQKGEP 1549



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 92/163 (56%), Gaps = 20/163 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE--RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            PG  G  G KG+ G +G  GV G   +GEKG PG+ G  G +GIPG  G+   KG+ G P
Sbjct: 1421 PGPSGLPGAKGDEGPRGPTGVPGLTIKGEKGLPGMPGKHGREGIPGRPGE---KGEQGLP 1477

Query: 170  GPQGIPGDEGKRGP---------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
               G+PG +G+RGP         KGDMG  G  GL GRDG PG  G  G+PG  G  G  
Sbjct: 1478 ---GLPGHKGERGPPGPVGLPGEKGDMGLMGPPGLTGRDGQPGVKGFPGLPGERGEKGEA 1534

Query: 221  GKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G P   G+ G PG  G +G  G+ G +G+RG  G++G+PG
Sbjct: 1535 GLRGPPGPIGQKGEPGFPGPSGIDGIPGEKGDRGWDGVSGLPG 1577



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 91/195 (46%), Gaps = 44/195 (22%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV--------------KGERGEKGAPGVVG 146
            GF        P G  G   QKGE   KGE G+              KGE+G  G PG  G
Sbjct: 973  GFPGEPGREGPRGFPGAPAQKGE---KGEPGISVKGSPGLPGPPGDKGEKGLPGPPGKDG 1029

Query: 147  PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------------------PKGDMG 188
            P G QG+PG  G+   KGD G PG  G+PG  G++G                    G+ G
Sbjct: 1030 PIGLQGLPGFVGE---KGDTGEPGISGLPGTPGEKGDTGPIGPPGPPGIAGLPGKDGNKG 1086

Query: 189  YPGRIGLDGRDGLPGEPGLDG---IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             PG  G  GR GLPG PG+ G    PG +G  G PG+ GLPG  G PG  G     GM G
Sbjct: 1087 EPGLPGAGGRAGLPGFPGVKGDRGEPGIDGSKGYPGRRGLPGATGRPGLEGA---PGMKG 1143

Query: 246  PRGNRGKSGINGVPG 260
             RG +G +G  G+PG
Sbjct: 1144 ERGEKGSAGFPGLPG 1158



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 92/205 (44%), Gaps = 53/205 (25%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KG+ G  G  G KG  G +G PG  G PG +G PG +G+RG KG  G+PG  
Sbjct: 1098 GLPGFPGVKGDRGEPGIDGSKGYPGRRGLPGATGRPGLEGAPGMKGERGEKGSAGFPGLP 1157

Query: 173  GI---------------------------------PGDEGKRGPKGDMGYPGRIGLDGRD 199
            GI                                  GD G  G  G  G PG++   G+ 
Sbjct: 1158 GIEGKPGRPGPPGMKGDLGPPGAPGLPGVIGYEGFKGDRGPPGLPGRKGEPGQVSEKGQK 1217

Query: 200  GLPGEPGL---DGIPGRNGMDGIPGKDGLPG-----------------KDGIPGTNGTNG 239
            G PG PG+    GIPGRNG+DG  G+ GLPG                 +DG+PG  G  G
Sbjct: 1218 GEPGMPGIRGPPGIPGRNGVDGAKGEPGLPGIGRDGLPGPKGEPGPPGRDGLPGFQGLKG 1277

Query: 240  EKGMTGPRGNRGKSGINGVPGTPAI 264
            + G+ G  G +G  G  G PG P +
Sbjct: 1278 DAGVRGFPGFKGDIGPIGAPGEPGL 1302



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 85/171 (49%), Gaps = 34/171 (19%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV--KGERGEKGAPGVVGPPGPQG----- 152
            GF  S  E  PPG   PIG +G+ G KG MG+  +G +G+KG  G +GPPG  G     
Sbjct: 375 HGFPGSKGERGPPG---PIGLQGQKGEKGNMGLAFEGPKGDKGQKGEIGPPGTPGPLEPF 431

Query: 153 ------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
                 +   +G RG KGD G  GP G    +G+ GP GD G  G  G+ G  GLPG P 
Sbjct: 432 QGMREEVIAPQGDRGEKGDKGEMGPDGF---KGEPGPIGDQGISGSPGMKGEKGLPGAP- 487

Query: 207 LDGIPGRNGMD---------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             GI GR+G           G  G DGL   DG+PG  G  GE G  GP G
Sbjct: 488 --GIRGRDGFSGPPGPPGRKGDRGYDGL---DGLPGRPGQKGEPGRDGPMG 533



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 99/216 (45%), Gaps = 35/216 (16%)

Query: 96   LVAMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAP---------G 143
            L   QG          PG +G   PIG  GE G  G  G+ GE+G+ G P         G
Sbjct: 1269 LPGFQGLKGDAGVRGFPGFKGDIGPIGAPGEPGLPGINGLPGEQGDVGPPGVPGLPGLEG 1328

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG-RIGLDGRDGLP 202
             +G PG  GIPG +G RG  G +G PG   IPG  G+   KGD G PG  I + G  G P
Sbjct: 1329 EMGAPGHPGIPGAKGDRGIPGAVGLPG---IPGAIGE---KGDRGPPGPTISIKGEKGEP 1382

Query: 203  GEPGLDGIPGR---------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G PGL G PG          +G DG  G  G PG  G PG +G  G KG  GPRG  G  
Sbjct: 1383 GIPGLRGAPGEKGDRGLEGLSGYDGEKGDSGAPGPVGNPGPSGLPGAKGDEGPRGPTGVP 1442

Query: 254  GI-----NGVPGTPAICAYKRESCSLLPNSETSQLL 284
            G+      G+PG P    + RE     P  +  Q L
Sbjct: 1443 GLTIKGEKGLPGMPG--KHGREGIPGRPGEKGEQGL 1476



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 91/202 (45%), Gaps = 54/202 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
            G +GP G  G  G  G++  KG++GE G PG+ GPPG   IPG  G  G KG+ G PG  
Sbjct: 1194 GDRGPPGLPGRKGEPGQVSEKGQKGEPGMPGIRGPPG---IPGRNGVDGAKGEPGLPGIG 1250

Query: 171  ---------------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI----- 210
                             G+PG +G +G  G  G+PG  G  G  G PGEPGL GI     
Sbjct: 1251 RDGLPGPKGEPGPPGRDGLPGFQGLKGDAGVRGFPGFKGDIGPIGAPGEPGLPGINGLPG 1310

Query: 211  ----------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP-- 246
                                  PG  G+ G  G  G+PG  G+PG  G  GEKG  GP  
Sbjct: 1311 EQGDVGPPGVPGLPGLEGEMGAPGHPGIPGAKGDRGIPGAVGLPGIPGAIGEKGDRGPPG 1370

Query: 247  -----RGNRGKSGINGVPGTPA 263
                 +G +G+ GI G+ G P 
Sbjct: 1371 PTISIKGEKGEPGIPGLRGAPG 1392



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 68/147 (46%), Gaps = 42/147 (28%)

Query: 135 ERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           E+G +G PG++GP GP+G    PG EG  GPKGD G PGPQ      G RG KGD G   
Sbjct: 228 EKGSRGPPGILGPQGPKGQRGFPGAEGLLGPKGDKGEPGPQ------GPRGTKGDRGK-- 279

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPG------------KDGLPGKDGIPGTNGTNG 239
                            GIPG  G+ G+PG            +DG  G DG PG  G  G
Sbjct: 280 ----------------MGIPGFTGIAGVPGVQGPPGAPGIPGRDGCNGTDGEPGARGYPG 323

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICA 266
           E    GPRG RG  G+ G  G P    
Sbjct: 324 E---VGPRGFRGPPGLKGQKGQPGFAG 347



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 85/176 (48%), Gaps = 40/176 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---------KRGPK 163
            GL G  G KG+ G +G  G KG+ G  GAPG  G PG  G+PG++G           G +
Sbjct: 1268 GLPGFQGLKGDAGVRGFPGFKGDIGPIGAPGEPGLPGINGLPGEQGDVGPPGVPGLPGLE 1327

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG-------------I 210
            G+MG PG  GIPG       KGD G PG +GL      PG PG  G             I
Sbjct: 1328 GEMGAPGHPGIPGA------KGDRGIPGAVGL------PGIPGAIGEKGDRGPPGPTISI 1375

Query: 211  PGRNGMDGIPGKDGLPGK------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GIPG  G PG+      +G+ G +G  G+ G  GP GN G SG+ G  G
Sbjct: 1376 KGEKGEPGIPGLRGAPGEKGDRGLEGLSGYDGEKGDSGAPGPVGNPGPSGLPGAKG 1431



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 88/187 (47%), Gaps = 38/187 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG  G IG KGE G+ G+ G  G+         +G++GAPG  G PGP G  G  G +G 
Sbjct: 876  PGRSGQIGLKGEPGSYGQKGEPGQCPPLDLINSKGDRGAPGEKGEPGPPGRDGLSGDKGL 935

Query: 163  KGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            +G  G PGP G                 GD+G  GP   MG+PG  G +G  G PG P  
Sbjct: 936  QGFAGPPGPAGQIGPPGPVGPRGLPGPRGDKGNTGP---MGFPGEPGREGPRGFPGAPAQ 992

Query: 208  DGIPGRNGMD-----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G  G  G+            G  G+ GLPG  G  G  G  G  G  G +G+ G+ GI+
Sbjct: 993  KGEKGEPGISVKGSPGLPGPPGDKGEKGLPGPPGKDGPIGLQGLPGFVGEKGDTGEPGIS 1052

Query: 257  GVPGTPA 263
            G+PGTP 
Sbjct: 1053 GLPGTPG 1059



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 85/169 (50%), Gaps = 27/169 (15%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------KGDMGYP 169
            G  G+ G +G  G  GE+GE+G P         G+PG +G+RGP         KGDMG  
Sbjct: 1454 GMPGKHGREGIPGRPGEKGEQGLP---------GLPGHKGERGPPGPVGLPGEKGDMGLM 1504

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------DGIPGRNGMDGIPGKD 223
            GP G+ G +G+ G KG  G PG  G  G  GL G PG        G PG +G+DGIPG+ 
Sbjct: 1505 GPPGLTGRDGQPGVKGFPGLPGERGEKGEAGLRGPPGPIGQKGEPGFPGPSGIDGIPGEK 1564

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
            G  G DG+ G  G  GEKG    RG  G  G+ GV G       K + C
Sbjct: 1565 GDRGWDGVSGLPGPVGEKGD---RGYPGPVGLMGVVGYVGQKGDKGDDC 1610



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 59/128 (46%), Gaps = 36/128 (28%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR-----------------------GPKGDM 187
           QGIPG EG  G KG  G PG  G PG  G R                       GPKG  
Sbjct: 593 QGIPGPEGLPGEKGAKGEPGITGFPGPTGPRGFDGPPGLPGPRGLPGEKGASLVGPKGMD 652

Query: 188 GYPGRIGLDGRDGLPGEPG----------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
           G P   GLDG  G  GE G          +DGIPG  G  G+PG+ G PGKDG PG +G 
Sbjct: 653 GAP---GLDGEKGQKGERGYAGPRGVPGDVDGIPGPPGEAGLPGERGTPGKDGTPGFSGA 709

Query: 238 NGEKGMTG 245
            GEKG  G
Sbjct: 710 PGEKGDAG 717



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 81/154 (52%), Gaps = 18/154 (11%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG  GP      IG +G  G  GE+G+ G PG+ G P   G PG+      KGD G  G
Sbjct: 1024 PPGKDGP------IGLQGLPGFVGEKGDTGEPGISGLP---GTPGE------KGDTGPIG 1068

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            P G PG  G  G  G+ G PG  G  GR GLPG PG+ G  G  G+D   G  G PG+ G
Sbjct: 1069 PPGPPGIAGLPGKDGNKGEPGLPGAGGRAGLPGFPGVKGDRGEPGID---GSKGYPGRRG 1125

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            +PG  G  G +G  G +G RG+ G  G PG P I
Sbjct: 1126 LPGATGRPGLEGAPGMKGERGEKGSAGFPGLPGI 1159



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 84/180 (46%), Gaps = 36/180 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------DEGKRGPK 163
           GL GP G KGE G +G  G KG+RG+ G PG  G     G+PG           G+ G  
Sbjct: 254 GLLGPKGDKGEPGPQGPRGTKGDRGKMGIPGFTGI---AGVPGVQGPPGAPGIPGRDGCN 310

Query: 164 GDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGR--DGLPGEPGLD---------- 208
           G  G PG +G PG+    G RGP G  G  G+ G  GR   G  GEPG+D          
Sbjct: 311 GTDGEPGARGYPGEVGPRGFRGPPGLKGQKGQPGFAGRFPVGQKGEPGIDGVRGPPGPPG 370

Query: 209 -----GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                G PG  G  G PG  GL G+ G  G  G        GP+G++G+ G  G PGTP 
Sbjct: 371 PQGEHGFPGSKGERGPPGPIGLQGQKGEKGNMGLA----FEGPKGDKGQKGEIGPPGTPG 426



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 92/222 (41%), Gaps = 45/222 (20%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIG---------------AKGEMGVKGERGE 138
            I L  + GF     +   PG+ G  G  GE G                 G+ G KGE G 
Sbjct: 1031 IGLQGLPGFVGEKGDTGEPGISGLPGTPGEKGDTGPIGPPGPPGIAGLPGKDGNKGEPGL 1090

Query: 139  KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
             GA G  G PG  G+ GD G+ G  G  GYPG +G+PG  G+ G +G  G  G  G  G 
Sbjct: 1091 PGAGGRAGLPGFPGVKGDRGEPGIDGSKGYPGRRGLPGATGRPGLEGAPGMKGERGEKGS 1150

Query: 199  DGLPGEPGL------------------------------DGIPGRNGMDGIPGKDGLPGK 228
             G PG PG+                              +G  G  G  G+PG+ G PG+
Sbjct: 1151 AGFPGLPGIEGKPGRPGPPGMKGDLGPPGAPGLPGVIGYEGFKGDRGPPGLPGRKGEPGQ 1210

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                G  G  G  G+ GP G  G++G++G  G P +    R+
Sbjct: 1211 VSEKGQKGEPGMPGIRGPPGIPGRNGVDGAKGEPGLPGIGRD 1252



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 83/176 (47%), Gaps = 29/176 (16%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG--PKGDMGYPGPQGIPGDE 178
           KG IG  G  G KG  G++G PG  G PG  GIPG +G+RG   KG+ G PG  G  G +
Sbjct: 826 KGAIGFAGFPGPKGTAGDRGFPGQDGVPGRPGIPGRKGERGLSVKGEPGEPGRSGQIGLK 885

Query: 179 GKRGPKGDMGYPGR------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+ G  G  G PG+      I   G  G PGE G  G PGR   DG+ G  GL G  G P
Sbjct: 886 GEPGSYGQKGEPGQCPPLDLINSKGDRGAPGEKGEPGPPGR---DGLSGDKGLQGFAGPP 942

Query: 233 G---------------TNGTNGEKGMTGPR---GNRGKSGINGVPGTPAICAYKRE 270
           G                 G  G+KG TGP    G  G+ G  G PG PA    K E
Sbjct: 943 GPAGQIGPPGPVGPRGLPGPRGDKGNTGPMGFPGEPGREGPRGFPGAPAQKGEKGE 998



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 90/239 (37%), Gaps = 87/239 (36%)

Query: 110  CPP-------GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP-------------- 148
            CPP       G +G  G+KGE G  G  G+ G++G +G  G  GP               
Sbjct: 900  CPPLDLINSKGDRGAPGEKGEPGPPGRDGLSGDKGLQGFAGPPGPAGQIGPPGPVGPRGL 959

Query: 149  ----------GPQGIPGDEGKRGPKGDMGYP--------------------------GPQ 172
                      GP G PG+ G+ GP+G  G P                          G +
Sbjct: 960  PGPRGDKGNTGPMGFPGEPGREGPRGFPGAPAQKGEKGEPGISVKGSPGLPGPPGDKGEK 1019

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----------------- 215
            G+PG  GK GP G  G PG +G  G  G PG  GL G PG  G                 
Sbjct: 1020 GLPGPPGKDGPIGLQGLPGFVGEKGDTGEPGISGLPGTPGEKGDTGPIGPPGPPGIAGLP 1079

Query: 216  ----------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                      + G  G+ GLP   G PG  G  GE G+ G +G  G+ G+ G  G P +
Sbjct: 1080 GKDGNKGEPGLPGAGGRAGLP---GFPGVKGDRGEPGIDGSKGYPGRRGLPGATGRPGL 1135



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 61/134 (45%), Gaps = 30/134 (22%)

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD-----------------------GLP 202
            G PGP+G+PG++G +G  G  G+PG  G  G D                       G+ 
Sbjct: 593 QGIPGPEGLPGEKGAKGEPGITGFPGPTGPRGFDGPPGLPGPRGLPGEKGASLVGPKGMD 652

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGK-DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G PGLDG  G+ G  G  G  G+PG  DGIPG  G   E G+ G RG  GK   +G PG 
Sbjct: 653 GAPGLDGEKGQKGERGYAGPRGVPGDVDGIPGPPG---EAGLPGERGTPGK---DGTPGF 706

Query: 262 PAICAYKRESCSLL 275
                 K ++   L
Sbjct: 707 SGAPGEKGDAGFCL 720



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 55/118 (46%), Gaps = 45/118 (38%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------------QGIPG 155
            PPGL    G+ G+ G KG  G+ GERGEKG  G+ GPPGP                GIPG
Sbjct: 1506 PPGL---TGRDGQPGVKGFPGLPGERGEKGEAGLRGPPGPIGQKGEPGFPGPSGIDGIPG 1562

Query: 156  DEGKRG------------PKGDMGYPGPQGI---------PGDEG------KRGPKGD 186
            ++G RG             KGD GYPGP G+          GD+G        GPKGD
Sbjct: 1563 EKGDRGWDGVSGLPGPVGEKGDRGYPGPVGLMGVVGYVGQKGDKGDDCIEPPMGPKGD 1620



 Score = 39.3 bits (90), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 83/202 (41%), Gaps = 61/202 (30%)

Query: 103 CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG--PPGPQGIPG----- 155
           CN T      G  G  G  GE+G +G  G  G +G+KG PG  G  P G +G PG     
Sbjct: 309 CNGTD-----GEPGARGYPGEVGPRGFRGPPGLKGQKGQPGFAGRFPVGQKGEPGIDGVR 363

Query: 156 ----------DEGKRGPKGDMGYPGPQGIPGDEGKRG--------PKGDMGYPGRIGLDG 197
                     + G  G KG+ G PGP G+ G +G++G        PKGD G  G IG  G
Sbjct: 364 GPPGPPGPQGEHGFPGSKGERGPPGPIGLQGQKGEKGNMGLAFEGPKGDKGQKGEIGPPG 423

Query: 198 RDGLPGEP---------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             G P EP               G  G  G  G DG  G+ G  G  GI G+ G  GEKG
Sbjct: 424 TPG-PLEPFQGMREEVIAPQGDRGEKGDKGEMGPDGFKGEPGPIGDQGISGSPGMKGEKG 482

Query: 243 MTGPRGNRGKSGINGVPGTPAI 264
           +               PG P I
Sbjct: 483 L---------------PGAPGI 489


>gi|148725310|emb|CAK04962.2| collagen type XI alpha-2 [Danio rerio]
          Length = 1877

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 86/154 (55%), Gaps = 15/154 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QG IG  G  G KG  G++G +G KG  G  G PG   I GD G +G +G++G PG
Sbjct: 809 PNGPQGSIGYPGPRGLKGAQGIRGLKGHKGEKGEDGFPG---IKGDFGVKGERGEVGVPG 865

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIG---LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           P+G   ++G  GPKG +G PG IG   L G  G  G PGL G PGR G+ G  G  G PG
Sbjct: 866 PRG---EDGPEGPKGRVGPPGEIGPLGLLGEKGKLGVPGLPGYPGRQGIKGSLGFPGFPG 922

Query: 228 KDGIPGTN------GTNGEKGMTGPRGNRGKSGI 255
            +G  GT       G  G++G TGPRG RG  G 
Sbjct: 923 TNGEKGTRGLIGKPGPRGQRGPTGPRGQRGPRGA 956



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 93/194 (47%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGD 165
           PG QG  G +G  G  GE G  G+ G  G PG  GPPG      P G  G++G  GP+G 
Sbjct: 756 PGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPGGTKGNQGPNGPQGS 815

Query: 166 MGYPGPQG------------------------IPGDEGKRGPKGDMGYPGRIGLDG---- 197
           +GYPGP+G                        I GD G +G +G++G PG  G DG    
Sbjct: 816 IGYPGPRGLKGAQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEGP 875

Query: 198 --RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMT----- 244
             R G PGE G  G+ G  G  G+PG  G PG+ GI      PG  GTNGEKG       
Sbjct: 876 KGRVGPPGEIGPLGLLGEKGKLGVPGLPGYPGRQGIKGSLGFPGFPGTNGEKGTRGLIGK 935

Query: 245 -GPRGNRGKSGING 257
            GPRG RG +G  G
Sbjct: 936 PGPRGQRGPTGPRG 949



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 78/158 (49%), Gaps = 15/158 (9%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A G  G+ G +G  G PG  GP G  G+PG  G  GP G  G  GP G  G++G  GP+G
Sbjct: 755 APGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPGGTKGNQGPNGPQG 814

Query: 186 DMGYPGRIGLDGRDGL------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            +GYPG  GL G  G+       GE G DG PG  G  G+ G+ G  G  G  G +G  G
Sbjct: 815 SIGYPGPRGLKGAQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEG 874

Query: 240 EKGMTGP---------RGNRGKSGINGVPGTPAICAYK 268
            KG  GP          G +GK G+ G+PG P     K
Sbjct: 875 PKGRVGPPGEIGPLGLLGEKGKLGVPGLPGYPGRQGIK 912



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 88/210 (41%), Gaps = 66/210 (31%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG---------------PQG 152
           PPG  G  G+ G  GA+G   E G+KG+RG  G PG+ G  G                 G
Sbjct: 632 PPGKAGRRGRAGADGARGMPGESGIKGDRGFDGLPGLPGDKGYRGQPGGMGPPGPHGEDG 691

Query: 153 IPGDEGKRGPKGDMGYPGPQGI-------------------------------------- 174
             GD+G  GP+G  G PGP+G+                                      
Sbjct: 692 ERGDDGDVGPRGLPGEPGPRGLLGPKGPSGLPGPPGVRGNDGPHGPKGNLGPQGEPGPPG 751

Query: 175 ----PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
               PG +G  GP+G  G PG  G  G+ GLPG PG DG PG       PGK+G  G  G
Sbjct: 752 QQGAPGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGH------PGKEGPGGTKG 805

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G NG  G  G  GPRG +G  GI G+ G
Sbjct: 806 NQGPNGPQGSIGYPGPRGLKGAQGIRGLKG 835



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 93/212 (43%), Gaps = 57/212 (26%)

Query: 111 PPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------- 160
           P G+ GP    G++G  GA G  G+ GE G KG  G  G PG   +PGD+G R       
Sbjct: 626 PQGVSGPPGKAGRRGRAGADGARGMPGESGIKGDRGFDGLPG---LPGDKGYRGQPGGMG 682

Query: 161 --------GPKGDMGYPGPQGIPGDEGKR------------------------GPKGDM- 187
                   G +GD G  GP+G+PG+ G R                        GPKG++ 
Sbjct: 683 PPGPHGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPSGLPGPPGVRGNDGPHGPKGNLG 742

Query: 188 -----------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                      G PG  G+ G  G  G PG  G  G+ G+ G+PG DG PG  G  G  G
Sbjct: 743 PQGEPGPPGQQGAPGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPGG 802

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           T G +G  GP+G+ G  G  G+ G   I   K
Sbjct: 803 TKGNQGPNGPQGSIGYPGPRGLKGAQGIRGLK 834



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 78/196 (39%), Gaps = 59/196 (30%)

Query: 132 VKGERGEKGAPGVVGP-------------------PGPQGIPG---DEGKRGPKGDMGYP 169
           V+  +GEKG P V+ P                    GPQG PG   D G+RGP G  G P
Sbjct: 480 VRAIKGEKGEPAVLEPGMLIEGPPGPEGPAGLPGPSGPQGQPGSVGDPGERGPTGKAGLP 539

Query: 170 GPQGIPGDEGK-------------------------------------RGPKGDMGYPGR 192
           G  G+PG  G                                      +GP G MG+ GR
Sbjct: 540 GADGVPGPPGTSVMLPFRFGQSAGEKGPVASAQEAQAQAILSQARLALKGPSGPMGFTGR 599

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G  G PG  G  G PG  G  G  G  G PGK G  G  G +G +GM G  G +G 
Sbjct: 600 PGPLGTPGSPGFKGERGDPGAQGPRGPQGVSGPPGKAGRRGRAGADGARGMPGESGIKGD 659

Query: 253 SGINGVPGTPAICAYK 268
            G +G+PG P    Y+
Sbjct: 660 RGFDGLPGLPGDKGYR 675



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 66/135 (48%), Gaps = 21/135 (15%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +G  G  G  G PGP G PG  G +G +GD   PG QG  G +G  GP G  G  GR G 
Sbjct: 588 KGPSGPMGFTGRPGPLGTPGSPGFKGERGD---PGAQGPRGPQGVSGPPGKAGRRGRAGA 644

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------------IPGTNGTNGEKGM 243
           DG  G+PGE    GI G  G DG+P   GLPG  G              G +G  G+ G 
Sbjct: 645 DGARGMPGE---SGIKGDRGFDGLP---GLPGDKGYRGQPGGMGPPGPHGEDGERGDDGD 698

Query: 244 TGPRGNRGKSGINGV 258
            GPRG  G+ G  G+
Sbjct: 699 VGPRGLPGEPGPRGL 713



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 69/146 (47%), Gaps = 21/146 (14%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------- 173
            +G  G +GE G KG+ G  G PG  GP GPQG PG  G  G +G  G  G QG       
Sbjct: 1428 RGPEGRQGEKGSKGDSGALGPPGKTGPVGPQGQPGKPGTEGLRGLPGTVGEQGSPGAAGP 1487

Query: 174  -----------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
                       + G  G  G KG+ G+PG +GL G  G  GE G  G+PG  G  G  G+
Sbjct: 1488 KGPPGPLGPPGLAGLRGDPGAKGEKGHPGMLGLIGPAGEQGEKGDRGMPGPQGSTGPKGE 1547

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+ G     G  G  G  GM GPRG
Sbjct: 1548 TGISGGT---GPLGPAGPAGMPGPRG 1570



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 71/178 (39%), Gaps = 45/178 (25%)

Query: 131  GVKGERGEKGAPGVVGPP---------------------GPQGIPGDEGKRGPKGDMGYP 169
            G KG+RGE G  G  G P                     GP+G  G++G +G  G +G P
Sbjct: 1390 GAKGDRGEDGEQGEAGSPGPTGENGPPGPPGKRGPAGTRGPEGRQGEKGSKGDSGALGPP 1449

Query: 170  ---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------------GLPGEP 205
               GP G  G  GK G +G  G PG +G  G                       G PG  
Sbjct: 1450 GKTGPVGPQGQPGKPGTEGLRGLPGTVGEQGSPGAAGPKGPPGPLGPPGLAGLRGDPGAK 1509

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G PG  G+ G  G+ G  G  G+PG  G+ G KG TG  G  G  G  G  G P 
Sbjct: 1510 GEKGHPGMLGLIGPAGEQGEKGDRGMPGPQGSTGPKGETGISGGTGPLGPAGPAGMPG 1567



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 56/130 (43%), Gaps = 36/130 (27%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKG------------------------------ERGEKG 140
            PPG  GP+G +G+ G  G  G++G                               RG+ G
Sbjct: 1448 PPGKTGPVGPQGQPGKPGTEGLRGLPGTVGEQGSPGAAGPKGPPGPLGPPGLAGLRGDPG 1507

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            A G  G PG  G+ G  G++G KGD G PGPQ      G  GPKG+ G  G  G  G  G
Sbjct: 1508 AKGEKGHPGMLGLIGPAGEQGEKGDRGMPGPQ------GSTGPKGETGISGGTGPLGPAG 1561

Query: 201  LPGEPGLDGI 210
              G PG  G+
Sbjct: 1562 PAGMPGPRGV 1571


>gi|405974545|gb|EKC39180.1| Collagen alpha-1(IX) chain [Crassostrea gigas]
          Length = 960

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 98/225 (43%), Gaps = 71/225 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGPPGPQGIPGDEGKRGPKGDM 166
           GL G  G+KG  G +G+ G  GERGE+G       PGV G PG  GIPG +GK GPKGD 
Sbjct: 455 GLPGLPGEKGSQGLRGDRGESGERGEQGPSGNDGRPGVDGMPGAAGIPGRDGKMGPKGDS 514

Query: 167 GY---PGPQGIPGDEGKRGPKGDMG----------------------------------- 188
           G    PG  G+PG  GK G +G+ G                                   
Sbjct: 515 GADGIPGKDGVPGKHGKHGERGEKGEPGEPGQPGKPGPPGPAYSPFMSDDPNAILDYDYK 574

Query: 189 ---------YPGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDG 224
                     PG  G DGR G+PG PG+ G PG+ G                 G+PG  G
Sbjct: 575 YRGEQGINGQPGPPGKDGRSGVPGSPGIPGEPGQPGRPGEMGDQGDPGDVGPRGLPGVPG 634

Query: 225 LPGKDGIPGTNGTNGEKGMTG---PRGNRGKSGINGVPGTPAICA 266
           L G  G PG +G  G++G+ G   PRG  GK G  G PGT  I  
Sbjct: 635 LKGSHGDPGMDGMQGDQGVAGAPGPRGEPGKDGRPGQPGTQGISG 679



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 92/220 (41%), Gaps = 50/220 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G+ G  G  G  G+ GE G+ G PG +G    QG PGD G RG  G  G  G  
Sbjct: 583 GQPGPPGKDGRSGVPGSPGIPGEPGQPGRPGEMGD---QGDPGDVGPRGLPGVPGLKGSH 639

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG-------------------- 212
           G PG +G +G +G  G PG  G  G+DG PG+PG  GI G                    
Sbjct: 640 GDPGMDGMQGDQGVAGAPGPRGEPGKDGRPGQPGTQGISGPMGPIGPIGQPGPPGPPGPP 699

Query: 213 ----------RNGM--------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                       GM         G PG  G PG  G+PG  G +GE+G  G  G  G  G
Sbjct: 700 GPSFDVKSIIGGGMSDSSMFGPSGAPGPSGAPGLTGMPGERGPSGERGTPGSTGAPGVPG 759

Query: 255 INGVP---------GTPAICAYKRESCSLLPNSETSQLLI 285
           I+G P         G P +         ++P SE  +L +
Sbjct: 760 ISGAPGQQGPPGHRGQPGMPGKPGLPGRMIPESEIRELCM 799



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 90/234 (38%), Gaps = 84/234 (35%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---- 166
           P GL G  G KG  G  G  G++G++G  GAPG  G PG  G PG  G +G  G M    
Sbjct: 626 PRGLPGVPGLKGSHGDPGMDGMQGDQGVAGAPGPRGEPGKDGRPGQPGTQGISGPMGPIG 685

Query: 167 -------------------------------------GYPGPQGIPG---DEGKRGPKGD 186
                                                G PGP G PG     G+RGP G+
Sbjct: 686 PIGQPGPPGPPGPPGPSFDVKSIIGGGMSDSSMFGPSGAPGPSGAPGLTGMPGERGPSGE 745

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK------------------ 228
            G PG  G  G  G+ G PG  G PG  G  G+PGK GLPG+                  
Sbjct: 746 RGTPGSTGAPGVPGISGAPGQQGPPGHRGQPGMPGKPGLPGRMIPESEIRELCMRLLREN 805

Query: 229 ----------------------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                                  G PG  G  GE+G+ GP G RG +G+ G+PG
Sbjct: 806 FDELVAGLRGPPGPPGVGKPGAQGSPGRVGAQGERGLPGPTGERGYAGMPGLPG 859



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 68/120 (56%), Gaps = 15/120 (12%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           +GE G+ G+ G  G  G  G PG  GIPG+ G+ G  G+MG    QG PGD G RG    
Sbjct: 576 RGEQGINGQPGPPGKDGRSGVPGSPGIPGEPGQPGRPGEMGD---QGDPGDVGPRG---- 628

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
              PG  GL G  G   +PG+DG+ G  G+ G PG  G PGKDG PG  GT   +G++GP
Sbjct: 629 --LPGVPGLKGSHG---DPGMDGMQGDQGVAGAPGPRGEPGKDGRPGQPGT---QGISGP 680



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 91/203 (44%), Gaps = 50/203 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
           PGL G  GQ GE G +G  G  G  GE G PG  G  GP+G+ G+EG RG +G+ G P  
Sbjct: 299 PGLLGFQGQPGERGERGLNGKDGSAGEPGKPGKDGSVGPRGLQGEEGPRGERGETGSPGP 358

Query: 170 ---------GPQGI------------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG-- 206
                    GP+G+             G  G+RG KGD G PG  G  G  GL G PG  
Sbjct: 359 AGPPGESVQGPEGVEGPQGPPGQPGPLGKPGERGEKGDSGMPGLPGAQGAQGLQGVPGLP 418

Query: 207 ---------LDGIPGR----------------NGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                     DG  G                  G  G+PG  G  G  G+ G  G +GE+
Sbjct: 419 GPPGASITTADGKAGNVQQVQGPPGPEGPQGIQGNAGLPGLPGEKGSQGLRGDRGESGER 478

Query: 242 GMTGPRGNRGKSGINGVPGTPAI 264
           G  GP GN G+ G++G+PG   I
Sbjct: 479 GEQGPSGNDGRPGVDGMPGAAGI 501



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 3/99 (3%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G +G  G  G  G PG  G+PG+ G  G  G+ G PG  G  G  G  G+PG  G  G N
Sbjct: 258 GKQGVSGLPGKPGTPGQDGLPGERGPAGKDGNDGRPGEPGKPGLLGFQGQPGERGERGLN 317

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G DG  G+ G PGKDG  G  G  GE+   GPRG RG++
Sbjct: 318 GKDGSAGEPGKPGKDGSVGPRGLQGEE---GPRGERGET 353



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 40/73 (54%)

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G+ G+ G  G PG PG DG+PG  G  G  G DG PG+ G PG  G  G+ G  G RG  
Sbjct: 258 GKQGVSGLPGKPGTPGQDGLPGERGPAGKDGNDGRPGEPGKPGLLGFQGQPGERGERGLN 317

Query: 251 GKSGINGVPGTPA 263
           GK G  G PG P 
Sbjct: 318 GKDGSAGEPGKPG 330



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 66/162 (40%), Gaps = 37/162 (22%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  G  G  GAPG+ G PG +G  G+ G  G  G  G PG  G PG +G  G +G  G 
Sbjct: 719 FGPSGAPGPSGAPGLTGMPGERGPSGERGTPGSTGAPGVPGISGAPGQQGPPGHRGQPGM 778

Query: 190 PGRIGLDGR-----------------------DGL--------------PGEPGLDGIPG 212
           PG+ GL GR                        GL               G PG  G  G
Sbjct: 779 PGKPGLPGRMIPESEIRELCMRLLRENFDELVAGLRGPPGPPGVGKPGAQGSPGRVGAQG 838

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G+ G  G+ G  G  G+PG  G  G  G  G +G+RG+ G
Sbjct: 839 ERGLPGPTGERGYAGMPGLPGPMGPQGPAGPEGVKGDRGEIG 880



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 3/52 (5%)

Query: 119 GQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           G  G +GA+GE G+    GERG  G PG+ GP GPQG  G EG +G +G++G
Sbjct: 829 GSPGRVGAQGERGLPGPTGERGYAGMPGLPGPMGPQGPAGPEGVKGDRGEIG 880



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 73/198 (36%), Gaps = 68/198 (34%)

Query: 116 GPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GP G  G  GA G  G+ GERG   E+G PG  G PG  GI G  G++GP G  G PG  
Sbjct: 720 GPSGAPGPSGAPGLTGMPGERGPSGERGTPGSTGAPGVPGISGAPGQQGPPGHRGQPGMP 779

Query: 173 GIPGDEGKRGPKGDM----------------------------------GYPGRIGLDGR 198
           G PG  G+  P+ ++                                  G PGR+G  G 
Sbjct: 780 GKPGLPGRMIPESEIRELCMRLLRENFDELVAGLRGPPGPPGVGKPGAQGSPGRVGAQGE 839

Query: 199 DGLPGE------PGLDGIPGRNGMDGIPGKDGLPGKDG---------------------- 230
            GLPG        G+ G+PG  G  G  G +G+ G  G                      
Sbjct: 840 RGLPGPTGERGYAGMPGLPGPMGPQGPAGPEGVKGDRGEIGEGIQGKQGNPGIPGPPGPP 899

Query: 231 ---IPGTNGTNGEKGMTG 245
              + G  G  G  G  G
Sbjct: 900 GEGVMGRPGERGNPGAHG 917



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 54/132 (40%), Gaps = 42/132 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  G  G+ G  GE G  G+ G  G PG  G PG  G                   Q
Sbjct: 264 GLPGKPGTPGQDGLPGERGPAGKDGNDGRPGEPGKPGLLGF------------------Q 305

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG+ G+RG            L+G+DG  GEPG             PGKDG  G  G+ 
Sbjct: 306 GQPGERGERG------------LNGKDGSAGEPGK------------PGKDGSVGPRGLQ 341

Query: 233 GTNGTNGEKGMT 244
           G  G  GE+G T
Sbjct: 342 GEEGPRGERGET 353


>gi|340378956|ref|XP_003387993.1| PREDICTED: collagen alpha-1(I) chain-like [Amphimedon queenslandica]
          Length = 1573

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 92/191 (48%), Gaps = 27/191 (14%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPGVVGP 147
            QG    + E   PG QGP G+ G++G++GE G             +G+RGE G PG  GP
Sbjct: 890  QGERGDSGEDGLPGQQGPPGESGDVGSQGETGPTGPDGAPGNPGSEGQRGETGPPGATGP 949

Query: 148  PGPQGI------------PGDEGKRGPKGD---MGYPGPQGIPGDEGKRGPKGDMGYPGR 192
             GP G+             GD+G +G KG+    G PG  G PG EG  G +G+ G PG 
Sbjct: 950  QGPPGLDGASGDRGDTGSAGDKGSKGSKGNRGATGAPGNDGTPGKEGGPGVRGEKGDPGP 1009

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            IGL G  G  G  G+ G PG  G  G  G  G  G  G  G  G  G  G  GP+G RG+
Sbjct: 1010 IGLSGVTGAAGTQGVRGDPGPPGSSGPQGPAGSAGDAGAKGEPGAAGPTGAQGPKGGRGQ 1069

Query: 253  SGINGVPGTPA 263
             G  G PG P 
Sbjct: 1070 KGDRGTPGQPG 1080



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 83/172 (48%), Gaps = 30/172 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++G  G  G  G +G  G  G+ G KG PG  GP G QG  G  G++G +G  G PGP 
Sbjct: 1023 GVRGDPGPPGSSGPQGPAGSAGDAGAKGEPGAAGPTGAQGPKGGRGQKGDRGTPGQPGPN 1082

Query: 173  GIPG---DEGKRGPKGDMGYPGRI------------------------GLDGRDGLPGEP 205
            G PG   D G RGP GD G  G                          GLDG +G PG  
Sbjct: 1083 GAPGTSGDHGARGPPGDPGTTGAPGNLGPIGPPGPPGAVGEPGSNGEDGLDGANGEPGPQ 1142

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G  G  G+PG  G PG    PG  G++G+KG  GPRGNRG +G  G
Sbjct: 1143 GPKGPSGNRGDTGLPGPVGSPGD---PGPKGSSGDKGAMGPRGNRGNTGAQG 1191



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 85/170 (50%), Gaps = 6/170 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP--- 169
            G QG  G  GE G  G+ G  GE G+ G+ G  GP GP G PG+ G  G +G+ G P   
Sbjct: 888  GEQGERGDSGEDGLPGQQGPPGESGDVGSQGETGPTGPDGAPGNPGSEGQRGETGPPGAT 947

Query: 170  GPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            GPQG PG +G  G +GD G     G  G  G  G  G PG DG PG+ G  G+ G+ G P
Sbjct: 948  GPQGPPGLDGASGDRGDTGSAGDKGSKGSKGNRGATGAPGNDGTPGKEGGPGVRGEKGDP 1007

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G  G+ G  G  G +G+ G  G  G SG  G  G+      K E  +  P
Sbjct: 1008 GPIGLSGVTGAAGTQGVRGDPGPPGSSGPQGPAGSAGDAGAKGEPGAAGP 1057



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/156 (41%), Positives = 78/156 (50%), Gaps = 12/156 (7%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
            Q G  GA G  G +GE+GE+G  G  G PG QG PG+ G  G +G+ G  GP G PG+ G
Sbjct: 874  QAGTPGAPGSPGDQGEQGERGDSGEDGLPGQQGPPGESGDVGSQGETGPTGPDGAPGNPG 933

Query: 180  KRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGRNGMDGIPGKDGLPG 227
              G +G+ G PG  G  G  GL             G+ G  G  G  G  G PG DG PG
Sbjct: 934  SEGQRGETGPPGATGPQGPPGLDGASGDRGDTGSAGDKGSKGSKGNRGATGAPGNDGTPG 993

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            K+G PG  G  G+ G  G  G  G +G  GV G P 
Sbjct: 994  KEGGPGVRGEKGDPGPIGLSGVTGAAGTQGVRGDPG 1029



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 89/213 (41%), Gaps = 60/213 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G QGP G  GE G +GE G +G   + G+ G PG  G PG  G  GD G  G  G  G  
Sbjct: 735 GTQGPPGSPGEQGFEGEAGQRGPAGQPGDAGVPGRDGEPGHSGPSGDHGVAGKDGQPGPT 794

Query: 170 GPQGIPGDEGKRGPKGDMGYPG---------RIGLDGRDG-------------------- 200
           GP+G  G  G RGP GD+G PG           G+DGRDG                    
Sbjct: 795 GPRGEKGAGGDRGPPGDVGAPGIAGSAGLTGSPGVDGRDGDTGPPGPAGAAGPRGERGQQ 854

Query: 201 ----------------------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                  PG PG  G  G  G  G  G+DGLPG+ G PG +G  
Sbjct: 855 GPPGPPGPPGTPGNPGSPGQAGTPGAPGSPGDQGEQGERGDSGEDGLPGQQGPPGESGDV 914

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G +G TGP      +G +G PG P     + E+
Sbjct: 915 GSQGETGP------TGPDGAPGNPGSEGQRGET 941



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 76/161 (47%), Gaps = 30/161 (18%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------------RGPK 163
           GQKG  GA G+ G +G  G +G  G+ G PGP G  G +G                RG +
Sbjct: 678 GQKGVSGAPGQRGPRGNTGRRGLMGINGNPGPSGAQGPQGSRGTPGPPGPQGNKGDRGTQ 737

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG QG  G+ G+RGP    G PG  G+ GRDG PG              G  G  
Sbjct: 738 GPPGSPGEQGFEGEAGQRGP---AGQPGDAGVPGRDGEPGH------------SGPSGDH 782

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G+ GKDG PG  G  GEKG  G RG  G  G  G+ G+  +
Sbjct: 783 GVAGKDGQPGPTGPRGEKGAGGDRGPPGDVGAPGIAGSAGL 823



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 81/159 (50%), Gaps = 21/159 (13%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+ G  GA GE G +G +G  G  G  G PGP G PGD G +G  GD G  GP+G  G+ 
Sbjct: 1128 GEDGLDGANGEPGPQGPKGPSGNRGDTGLPGPVGSPGDPGPKGSSGDKGAMGPRGNRGNT 1187

Query: 179  GKRGP---KGDMGYPG------------RIGLDGRDGLPGE--PGLDGIP----GRNGMD 217
            G +GP   KGD G PG              G DG  G  G+  PG D  P    G  G  
Sbjct: 1188 GAQGPQGEKGDNGAPGLSGASGAAGANGNPGDDGEKGDSGQTGPGGDRGPQGDVGPKGEQ 1247

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G+ G  G+ G+ G PG  G+ G+ G+ GP G++G+ G N
Sbjct: 1248 GLKGDRGVQGELGPPGEKGSKGQVGLPGPSGHKGEQGAN 1286



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 71/135 (52%), Gaps = 3/135 (2%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            + GE G+ G  GE   PG  GP GP G  GD G  GP G  G PGP+G  GD+G  GP+G
Sbjct: 1126 SNGEDGLDGANGE---PGPQGPKGPSGNRGDTGLPGPVGSPGDPGPKGSSGDKGAMGPRG 1182

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            + G  G  G  G  G  G PGL G  G  G +G PG DG  G  G  G  G  G +G  G
Sbjct: 1183 NRGNTGAQGPQGEKGDNGAPGLSGASGAAGANGNPGDDGEKGDSGQTGPGGDRGPQGDVG 1242

Query: 246  PRGNRGKSGINGVPG 260
            P+G +G  G  GV G
Sbjct: 1243 PKGEQGLKGDRGVQG 1257



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP--- 169
           G +GP G KGE G  G  G  G  GE G+ G+ GPPG  G  GD G+ G  G  G     
Sbjct: 597 GPRGPYGHKGEKGNSGLPGNPGALGESGSLGLPGPPGDNGRDGDNGQPGAPGLPGASGPP 656

Query: 170 ---------------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGR---------- 198
                                G +G+ G  G+RGP+G+ G  G +G++G           
Sbjct: 657 GEAGPDGPPGPQGVPGWPGSKGQKGVSGAPGQRGPRGNTGRRGLMGINGNPGPSGAQGPQ 716

Query: 199 -----------------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                                   G PGE G +G  G+ G  G PG  G+PG+DG PG +
Sbjct: 717 GSRGTPGPPGPQGNKGDRGTQGPPGSPGEQGFEGEAGQRGPAGQPGDAGVPGRDGEPGHS 776

Query: 236 GTNGEKGM---------TGPRGNRGKSGINGVPG 260
           G +G+ G+         TGPRG +G  G  G PG
Sbjct: 777 GPSGDHGVAGKDGQPGPTGPRGEKGAGGDRGPPG 810



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 94/241 (39%), Gaps = 64/241 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP--------------------- 150
           PG  G +G+ G +G  G  G  G  G+ G PG  G PG                      
Sbjct: 614 PGNPGALGESGSLGLPGPPGDNGRDGDNGQPGAPGLPGASGPPGEAGPDGPPGPQGVPGW 673

Query: 151 ------QGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKG---------------D 186
                 +G+ G  G+RGP+G+ G  G  GI   PG  G +GP+G               D
Sbjct: 674 PGSKGQKGVSGAPGQRGPRGNTGRRGLMGINGNPGPSGAQGPQGSRGTPGPPGPQGNKGD 733

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G  G  G  G  G  GE G  G  G+ G  G+PG+DG PG  G  G +G  G+ G  GP
Sbjct: 734 RGTQGPPGSPGEQGFEGEAGQRGPAGQPGDAGVPGRDGEPGHSGPSGDHGVAGKDGQPGP 793

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREG 306
            G RG+ G  G  G P                        P I GS  +  S  +  R+G
Sbjct: 794 TGPRGEKGAGGDRGPPGDVGA-------------------PGIAGSAGLTGSPGVDGRDG 834

Query: 307 D 307
           D
Sbjct: 835 D 835



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 64/140 (45%), Gaps = 30/140 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-------------------- 152
            GL GP+G  G+ G KG  G KG  G +G  G  G  GPQG                    
Sbjct: 1155 GLPGPVGSPGDPGPKGSSGDKGAMGPRGNRGNTGAQGPQGEKGDNGAPGLSGASGAAGAN 1214

Query: 153  -IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
              PGD+G+   KGD G  GP       G RGP+GD+G  G  GL G  G+ GE G  G  
Sbjct: 1215 GNPGDDGE---KGDSGQTGPG------GDRGPQGDVGPKGEQGLKGDRGVQGELGPPGEK 1265

Query: 212  GRNGMDGIPGKDGLPGKDGI 231
            G  G  G+PG  G  G+ G 
Sbjct: 1266 GSKGQVGLPGPSGHKGEQGA 1285



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 65/115 (56%), Gaps = 6/115 (5%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           GD+G RGP G  G  G  G+PG+ G  G  G +G PG  G +GRDG  G+PG  G+PG +
Sbjct: 594 GDQGPRGPYGHKGEKGNSGLPGNPGALGESGSLGLPGPPGDNGRDGDNGQPGAPGLPGAS 653

Query: 215 GMDGIPGKDGLPGKDGIP------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G DG PG  G+P      G  G +G  G  GPRGN G+ G+ G+ G P 
Sbjct: 654 GPPGEAGPDGPPGPQGVPGWPGSKGQKGVSGAPGQRGPRGNTGRRGLMGINGNPG 708


>gi|162568970|gb|ABY19404.1| PclA [Pasteuria ramosa]
          Length = 625

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 106/210 (50%), Gaps = 27/210 (12%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGVVGP------- 147
           G      E   PG  GP G++GE G       +GE G+ G +GEKG PG  GP       
Sbjct: 142 GLSGPKGEKGDPGEPGPQGRQGEAGLPGPPGKQGEPGLSGSKGEKGDPGESGPQGRQGEA 201

Query: 148 --PGPQGIPGDEGKRGPKGDM---GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
             PGP+G  G+ G  GPKGD    G PGP+G  G+ G  GPKGD    G  G+ G  G  
Sbjct: 202 GLPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQ---GEAGMPGPKGDQ 258

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV---- 258
           GE G+ G  G  G  GIPG  G  G+ G+PG  G  GE GM GP+G++G++GI G+    
Sbjct: 259 GEAGMPGPKGDQGEAGIPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGIPGLKGDQ 318

Query: 259 --PGTPAICAYKRESCSLLPNSETSQLLIP 286
              G P +   + E+    P  +  +  IP
Sbjct: 319 GEAGMPGLKGDQGEAGMPGPKGDQGEAGIP 348



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 98/193 (50%), Gaps = 9/193 (4%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG         PPG QG  G  G  G KG+ G  G +G +G  G+ GPPG QG PG  G 
Sbjct: 123 QGRQGEAGLPGPPGKQGEPGLSGPKGEKGDPGEPGPQGRQGEAGLPGPPGKQGEPGLSGS 182

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G KGD G  GPQG  G+ G  GPKGD G     G+ G  G  GE G+ G  G  G  G+
Sbjct: 183 KGEKGDPGESGPQGRQGEAGLPGPKGDQG---EAGMPGPKGDQGEAGMPGPKGDQGEAGM 239

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI------NGVPGTPAICAYKRESCS 273
           PG  G  G+ G+PG  G  GE GM GP+G++G++GI       G  G P     + E+  
Sbjct: 240 PGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGIPGPKGDQGEAGMPGPKGDQGEAGM 299

Query: 274 LLPNSETSQLLIP 286
             P  +  +  IP
Sbjct: 300 PGPKGDQGEAGIP 312



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 94/176 (53%), Gaps = 12/176 (6%)

Query: 120 QKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG 176
           +KG+IG  G  G  GE   +G +G  G+ GPPG QG PG  G +G KGD G PGPQG  G
Sbjct: 104 KKGDIGIPGPQGYPGEPGPQGRQGEAGLPGPPGKQGEPGLSGPKGEKGDPGEPGPQGRQG 163

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + G  GP G  G PG   L G  G  G+PG  G  GR G  G+PG  G  G+ G+PG  G
Sbjct: 164 EAGLPGPPGKQGEPG---LSGSKGEKGDPGESGPQGRQGEAGLPGPKGDQGEAGMPGPKG 220

Query: 237 TNGEKGMTGPRGNRGKSGI------NGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
             GE GM GP+G++G++G+       G  G P     + E+    P  +  +  IP
Sbjct: 221 DQGEAGMPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGIP 276



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/207 (40%), Positives = 103/207 (49%), Gaps = 21/207 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
           G   S  E   PG  GP G++GE G    KG+ G  G  G KG  G  G PGP+G  G+ 
Sbjct: 178 GLSGSKGEKGDPGESGPQGRQGEAGLPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEA 237

Query: 158 GKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPG------EP 205
           G  GPKGD G    PGP+G  G+ G  GPKGD G    PG  G  G  G+PG      E 
Sbjct: 238 GMPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGIPGPKGDQGEAGMPGPKGDQGEA 297

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI------NGVP 259
           G+ G  G  G  GIPG  G  G+ G+PG  G  GE GM GP+G++G++GI       G  
Sbjct: 298 GMPGPKGDQGEAGIPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGIPGSKGDQGEA 357

Query: 260 GTPAICAYKRESCSLLPNSETSQLLIP 286
           G P     + E+    P  +  +  IP
Sbjct: 358 GIPGPKGDQGEAGIPGPKGDQGEAGIP 384



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 96/186 (51%), Gaps = 18/186 (9%)

Query: 97  VAMQGFCNSTKEYCPPGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------ 147
             + G      E   PGL   QG  G  G  G +GE G+ G +G++G  G+ GP      
Sbjct: 309 AGIPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGIPGSKGDQGEAGIPGPKGDQGE 368

Query: 148 ---PGPQGIPGDEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
              PGP+G  G+ G  GPKGD G    PGP+G  G+ G  GPKGD G  G  GL G  G 
Sbjct: 369 AGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGMPGLKGDQGE 428

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PGL G  G  GM   PG  G  G+ GIPG+ G  GE G+ GP+G++G++GI G  G 
Sbjct: 429 AGMPGLKGDQGEAGM---PGPKGDQGEAGIPGSKGDQGEAGIPGPKGDQGEAGIPGPKGD 485

Query: 262 PAICAY 267
           P     
Sbjct: 486 PGEAGM 491



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 99/199 (49%), Gaps = 12/199 (6%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
             M G      E   PG +G  G+ G  G KG+ G  G  G KG  G  G PGP+G  G+
Sbjct: 213 AGMPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGE 272

Query: 157 EGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  GPKGD G    PGP+G  G+ G  GPKGD G  G  GL G  G  G PGL G  G 
Sbjct: 273 AGIPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGIPGLKGDQGEAGMPGLKGDQGE 332

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI------NGVPGTPAICAY 267
            GM   PG  G  G+ GIPG+ G  GE G+ GP+G++G++GI       G  G P     
Sbjct: 333 AGM---PGPKGDQGEAGIPGSKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGD 389

Query: 268 KRESCSLLPNSETSQLLIP 286
           + E+    P  +  +  IP
Sbjct: 390 QGEAGIPGPKGDQGEAGIP 408



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 102/195 (52%), Gaps = 21/195 (10%)

Query: 113 GLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G+ GP G +GE G       +GE G+ G +G++G  G+ GP G QG  G  G +G +G+ 
Sbjct: 262 GMPGPKGDQGEAGIPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGIPGLKGDQGEA 321

Query: 167 GYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPG------EPGLDGIPGRNGMD 217
           G PG +G  G+ G  GPKGD G    PG  G  G  G+PG      E G+ G  G  G  
Sbjct: 322 GMPGLKGDQGEAGMPGPKGDQGEAGIPGSKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEA 381

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV------PGTPAICAYKRES 271
           GIPG  G  G+ GIPG  G  GE G+ GP+G++G++G+ G+       G P +   + E+
Sbjct: 382 GIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGMPGLKGDQGEAGMPGLKGDQGEA 441

Query: 272 CSLLPNSETSQLLIP 286
               P  +  +  IP
Sbjct: 442 GMPGPKGDQGEAGIP 456



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 99/189 (52%), Gaps = 21/189 (11%)

Query: 113 GLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G+ GP G +GE G       +GE G+ G +G++G  G+ GP G QG  G  G +G +G+ 
Sbjct: 298 GMPGPKGDQGEAGIPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGIPGSKGDQGEA 357

Query: 167 GYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPG------EPGLDGIPGRNGMD 217
           G PGP+G  G+ G  GPKGD G    PG  G  G  G+PG      E G+ G  G  G  
Sbjct: 358 GIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEA 417

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G+PG  G  G+ G+PG  G  GE GM GP+G++G++GI      P     + E+    P 
Sbjct: 418 GMPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGI------PGSKGDQGEAGIPGPK 471

Query: 278 SETSQLLIP 286
            +  +  IP
Sbjct: 472 GDQGEAGIP 480



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 89/169 (52%), Gaps = 9/169 (5%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQGIP 154
           G   S  +    G+ GP G +GE G       +GE G+ G +G++G  G+ GP G Q   
Sbjct: 346 GIPGSKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQ--- 402

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ G  GPKGD G  G  G+ GD+G+ G  G  G  G  G+ G  G  GE G+ G  G  
Sbjct: 403 GEAGIPGPKGDQGEAGMPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGIPGSKGDQ 462

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  GIPG  G  G+ GIPG  G  GE GM GP+G+RG  G  G  G+P 
Sbjct: 463 GEAGIPGPKGDQGEAGIPGPKGDPGEAGMPGPKGDRGFVGPRGEVGSPG 511



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 85/158 (53%), Gaps = 15/158 (9%)

Query: 113 GLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G+ GP G +GE G       +GE G+ G +G++G  G+ GP G QG  G  G +G +G+ 
Sbjct: 370 GIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGMPGLKGDQGEA 429

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG +G  G+ G  GPKGD G     G+ G  G  GE G+ G  G  G  GIPG  G P
Sbjct: 430 GMPGLKGDQGEAGMPGPKGDQG---EAGIPGSKGDQGEAGIPGPKGDQGEAGIPGPKGDP 486

Query: 227 GKDGIPGTN------GTNGEKGMTGPRGNRGKSGINGV 258
           G+ G+PG        G  GE G  GPRG+RG  G+ G 
Sbjct: 487 GEAGMPGPKGDRGFVGPRGEVGSPGPRGDRGLVGLRGA 524



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 82/152 (53%), Gaps = 6/152 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ GP G +GE G  G    KG++GE G PG+ G  G  G+PG    +G +G+ G PGP+
Sbjct: 394 GIPGPKGDQGEAGIPG---PKGDQGEAGMPGLKGDQGEAGMPG---LKGDQGEAGMPGPK 447

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G+ G  G KGD G  G  G  G  G  G PG  G PG  GM G  G  G  G  G  
Sbjct: 448 GDQGEAGIPGSKGDQGEAGIPGPKGDQGEAGIPGPKGDPGEAGMPGPKGDRGFVGPRGEV 507

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G+ G  G++G+ G RG +G  G  G+PG P +
Sbjct: 508 GSPGPRGDRGLVGLRGAQGDIGKRGLPGVPGL 539



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 66/124 (53%), Gaps = 12/124 (9%)

Query: 97  VAMQGFCNSTKEYCPPGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------ 147
             M G      E   PGL   QG  G  G  G +GE G+ G +G++G  G+ GP      
Sbjct: 417 AGMPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGIPGSKGDQGEAGIPGPKGDQGE 476

Query: 148 ---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
              PGP+G PG+ G  GPKGD G+ GP+G  G  G RG +G +G  G  G  G+ GLPG 
Sbjct: 477 AGIPGPKGDPGEAGMPGPKGDRGFVGPRGEVGSPGPRGDRGLVGLRGAQGDIGKRGLPGV 536

Query: 205 PGLD 208
           PGL+
Sbjct: 537 PGLN 540



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/124 (45%), Positives = 69/124 (55%), Gaps = 15/124 (12%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDMGY---PGP 171
           KG+ G  G  G+KG++GE G PG  G  G  GIPG +G +G      PKGD G    PGP
Sbjct: 423 KGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGIPGSKGDQGEAGIPGPKGDQGEAGIPGP 482

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G PG+ G  GPKGD G+   +G  G  G PG  G  G+ G  G  G  GK GLP   G+
Sbjct: 483 KGDPGEAGMPGPKGDRGF---VGPRGEVGSPGPRGDRGLVGLRGAQGDIGKRGLP---GV 536

Query: 232 PGTN 235
           PG N
Sbjct: 537 PGLN 540


>gi|410978895|ref|XP_003995823.1| PREDICTED: collagen alpha-1(XXVII) chain [Felis catus]
          Length = 1849

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/136 (50%), Positives = 78/136 (57%), Gaps = 12/136 (8%)

Query: 119 GQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G KG++G     G  G  G +G KG PG  G PG QG PG EG  G KG   YPG QG+P
Sbjct: 677 GAKGDVGLPGLSGNPGPLGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKG---YPGRQGLP 733

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G  GPKG  GY   IGL G  GLP   GE GL G+PG+ G  G PG  G  G+ G P
Sbjct: 734 GPVGDPGPKGSRGY---IGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPP 790

Query: 233 GTNGTNGEKGMTGPRG 248
           G +G  GE G+ GPRG
Sbjct: 791 GLDGNPGELGLPGPRG 806



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 92/199 (46%), Gaps = 30/199 (15%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP G+ G  G+KGE G KG++G+ GAPG  G  G QG+PG  
Sbjct: 1359 GVQGLRGDPGQQGLPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPGRRGIQGLQGLPGPR 1418

Query: 158  GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G +G  G  GP G P               GD G  GP G  G PG  GL G  G P
Sbjct: 1419 GVVGRQGPEGMAGPDGFPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1478

Query: 203  GEPGLDGIPGR---------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT------GPR 247
            G  G  G+PG+          G  G+PG  G PG  G PG +G  G  GM       GP 
Sbjct: 1479 GFKGESGLPGQLGPSGKRGTAGGTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPP 1538

Query: 248  GNRGKSGINGVPGTPAICA 266
            G+ G  GI G  G+P +  
Sbjct: 1539 GDIGLKGIQGPRGSPGLMG 1557



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/150 (43%), Positives = 84/150 (56%), Gaps = 12/150 (8%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            G +GE G  G  G++G  G+ G PG QG+PG  G R      G PGP+G  G+EG +G +
Sbjct: 1344 GDRGEPGDPGYPGQEGVQGLRGDPGQQGLPGHPGPR------GRPGPKGSKGEEGPKGKQ 1397

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEK 241
            G  G PGR G+ G  GLPG     G+ GR G +G+ G DG PG+DG  G  G    +G+ 
Sbjct: 1398 GKAGAPGRRGIQGLQGLPGP---RGVVGRQGPEGMAGPDGFPGRDGQAGQQGEQGDDGDP 1454

Query: 242  GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  GP G RG  G+ G+PG      +K ES
Sbjct: 1455 GPMGPAGKRGNPGVAGLPGAQGPPGFKGES 1484



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 89/161 (55%), Gaps = 18/161 (11%)

Query: 112 PGLQG---PIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PGL G   P+G+KG  G  G  G  GE+G+   +G+PG  G PG QG+PG  G  GPKG 
Sbjct: 685 PGLSGNPGPLGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGS 744

Query: 166 MGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGM 216
            GY   PG  G+PG +G+RG     G PG+ G  GR G PG+      PGLDG PG  G+
Sbjct: 745 RGYIGLPGLFGLPGSDGERG---LPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGELGL 801

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  GL G  G  G  G  G KG+ G  GN G+ G+ G
Sbjct: 802 PGPRGVPGLIGDMGALGPTGYPGPKGLKGLMGNMGEPGLKG 842



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 79/143 (55%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG +GP          GKRG  G  G 
Sbjct: 1454 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGP---------SGKRGTAGGTGL 1504

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ GL GI G  G  G+ GK+G+ G 
Sbjct: 1505 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGLKGIQGPRGSPGLMGKEGIIGP 1564

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1565 LGILGPSGRPGPKGDKGSRGDLG 1587



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 77/145 (53%), Gaps = 12/145 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++
Sbjct: 662 GQKGDPGLSPGKAHDGAKGDVGLPGLSGNPGPLGR---------KGHKGYPGPAGHPGEQ 712

Query: 179 GKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+ GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  
Sbjct: 713 GQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKR 772

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  G RG  G++G PG
Sbjct: 773 GKMGRPGFPGDFGERGPPGLDGNPG 797



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 77/148 (52%), Gaps = 9/148 (6%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKG------DM 166
           GP G +G IG  G  G+ G  GE+G PGV G  G  G    PGD G+RGP G      ++
Sbjct: 740 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGEL 799

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PGP+G+PG  G  G  G  GYPG  GL G  G  GEPGL G  G  G+ G+ G  G  
Sbjct: 800 GLPGPRGVPGLIGDMGALGPTGYPGPKGLKGLMGNMGEPGLKGDKGEQGVPGVSGDTGFQ 859

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G  G  G  G +G  GP G  G  G
Sbjct: 860 GDKGSQGLPGFPGARGKPGPLGKVGDKG 887



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 89/174 (51%), Gaps = 27/174 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------GIPGDEGK 159
           PG  G  G++G+ G +G  G KG  G +G PG VG PGP+            G+PG +G+
Sbjct: 703 PGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGE 762

Query: 160 R------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGL 207
           R      G +G MG P   G PGD G+RGP G  G PG +GL G  G+P      G  G 
Sbjct: 763 RGLPGVPGKRGKMGRP---GFPGDFGERGPPGLDGNPGELGLPGPRGVPGLIGDMGALGP 819

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG  G+ G+ G  G PG  G  G  G  G  G TG +G++G  G+ G PG 
Sbjct: 820 TGYPGPKGLKGLMGNMGEPGLKGDKGEQGVPGVSGDTGFQGDKGSQGLPGFPGA 873



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 30/188 (15%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           I L  + G   S  E    GL G  G++G++G     G  G+ GE+G PG+ G PG  G+
Sbjct: 748 IGLPGLFGLPGSDGER---GLPGVPGKRGKMG---RPGFPGDFGERGPPGLDGNPGELGL 801

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG  G  G  GDMG  GP G PG +G +G  G+MG PG  G  G  G+PG  G  G  G 
Sbjct: 802 PGPRGVPGLIGDMGALGPTGYPGPKGLKGLMGNMGEPGLKGDKGEQGVPGVSGDTGFQGD 861

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------------------TGPRGNRGK 252
            G  G+P   G PG  G PG  G  G+KG                       GP G +GK
Sbjct: 862 KGSQGLP---GFPGARGKPGPLGKVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGK 918

Query: 253 SGINGVPG 260
            G  G+PG
Sbjct: 919 PGARGLPG 926



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 90/207 (43%), Gaps = 48/207 (23%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G         P G  GP G KG +G  GE G+KG++GE+G PGV G         D 
Sbjct: 806  GVPGLIGDMGALGPTGYPGPKGLKGLMGNMGEPGLKGDKGEQGVPGVSG---------DT 856

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------------------GLDGRD 199
            G +G KG  G PG    PG  GK GP G +G  G +                  G +G +
Sbjct: 857  GFQGDKGSQGLPG---FPGARGKPGPLGKVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPE 913

Query: 200  GLPGEPGLDGIPGRNG------------------MDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G+ G+PG  G+PG  G                  ++G PG+ G PG+ G  G  G  G+ 
Sbjct: 914  GMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGPDGVKGEPGDP 973

Query: 242  GMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  GP G +G  G  G+ G P I   K
Sbjct: 974  GRPGPVGEQGLLGFIGLVGEPGIMGEK 1000



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 84/194 (43%), Gaps = 57/194 (29%)

Query: 111  PPGLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVGPPG 149
            PPG  GP G KG+ GA+G  G                     ++G+ G KG PG  GP G
Sbjct: 906  PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGPDG 965

Query: 150  PQGIPGDEGKRGPKGD------MGYPGPQGIPGDEGKR---------GPKGDMGYPGRIG 194
             +G PGD G+ GP G+      +G  G  GI G++G R         GPKG MG+PG  G
Sbjct: 966  VKGEPGDPGRPGPVGEQGLLGFIGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPGTPG 1025

Query: 195  ---------------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                                 + G  GL G  G DG  G  G  G+ G  G  G+ G PG
Sbjct: 1026 AVGTPGEPGPRGPPGSRGPPGMRGAKGLRGPRGPDGPAGEQGSRGLKGPSGPQGRPGQPG 1085

Query: 234  TNGTNGEKGMTGPR 247
              G  GE+G +G R
Sbjct: 1086 QQGAAGERGHSGVR 1099



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 92/240 (38%), Gaps = 94/240 (39%)

Query: 112  PGLQGPIGQKGEIGA---------------KGEMGVKGERGEKGAPG------------V 144
            PG QG IGQ+GE G                +G+ G  GERG+KG  G            +
Sbjct: 1165 PGEQGLIGQRGEPGLEGDGGPAGPDGLKGDRGDPGPDGERGDKGQEGLKGEDGPPGPPGI 1224

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD---------------EGKRGPKGDMGY 189
             G  GP+G PG +G++G  G  G  G QG  G+               +G RG  G  G 
Sbjct: 1225 TGVRGPEGKPGRQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGA 1284

Query: 190  PGRIGLDGRDGLPG---------------------------------------------- 203
            PGR+G  G  GL G                                              
Sbjct: 1285 PGRMGAQGEPGLAGYDGHKGVMGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRG 1344

Query: 204  ---EPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
               EPG  G PG+ G+ G+   PG+ GLPG  G  G  G  G KG  GP+G +GK+G  G
Sbjct: 1345 DRGEPGDPGYPGQEGVQGLRGDPGQQGLPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPG 1404



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 80/183 (43%), Gaps = 42/183 (22%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------GKRGPKGDMGYPG 170
            +IG  G+ G +G +G+ GA G+ GP G  G  GDE            G+ G KG  G PG
Sbjct: 903  DIGPPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPG 962

Query: 171  PQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------LDGIPGRNGMDG 218
            P G+   PGD G+ GP G+ G  G IGL G  G+ GE G           G  G  G  G
Sbjct: 963  PDGVKGEPGDPGRPGPVGEQGLLGFIGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPG 1022

Query: 219  IPGK------------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG                    G+ G  G+ G  G +G  G  G RG +G SG  G PG
Sbjct: 1023 TPGAVGTPGEPGPRGPPGSRGPPGMRGAKGLRGPRGPDGPAGEQGSRGLKGPSGPQGRPG 1082

Query: 261  TPA 263
             P 
Sbjct: 1083 QPG 1085



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 58/118 (49%), Gaps = 18/118 (15%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA------KGEMGVKGE---RGEKGAPGVVG 146
            L   QG      E   PG  GP G++G  G       +GE G KG+    GE G PG+ G
Sbjct: 1471 LPGAQGPPGFKGESGLPGQLGPSGKRGTAGGTGLPGNQGEPGSKGQPGDSGEMGFPGMAG 1530

Query: 147  PPGPQGIPGDEGKRGPKGDMGYP---------GPQGIPGDEGKRGPKGDMGYPGRIGL 195
              GP+G PGD G +G +G  G P         GP GI G  G+ GPKGD G  G +GL
Sbjct: 1531 LFGPKGPPGDIGLKGIQGPRGSPGLMGKEGIIGPLGILGPSGRPGPKGDKGSRGDLGL 1588



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 83/209 (39%), Gaps = 75/209 (35%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP----------- 169
            +G  G +G  G  G  GE+G+ G+ GP GPQG PG  G++G  G+ G+            
Sbjct: 1048 RGAKGLRGPRGPDGPAGEQGSRGLKGPSGPQGRPGQPGQQGAAGERGHSGVRGFPGIPGP 1107

Query: 170  ----------------------------GPQ---------GIPGDEGKRGPKGDMGYPGR 192
                                        GPQ         G+PG+ G +G  G +G PG 
Sbjct: 1108 SGPPGTKGLPGEPGPQGPQGPLGPPGEMGPQGPPGAVGEPGLPGEAGMKGDLGPLGTPGE 1167

Query: 193  IGLDGRDGLP------------------GEPGLDGIPGRNGMDGIPGKD---------GL 225
             GL G+ G P                  G+PG DG  G  G +G+ G+D         G+
Sbjct: 1168 QGLIGQRGEPGLEGDGGPAGPDGLKGDRGDPGPDGERGDKGQEGLKGEDGPPGPPGITGV 1227

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G +G PG  G  G  G  G +G +G+ G
Sbjct: 1228 RGPEGKPGRQGEKGRTGAKGAKGYQGQLG 1256



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 75/183 (40%), Gaps = 51/183 (27%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGER---------------------------------- 136
            P G QG  GQ G+ GA GE G  G R                                  
Sbjct: 1074 PSGPQGRPGQPGQQGAAGERGHSGVRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPLGPPG 1133

Query: 137  --GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------------ 182
              G +G PG VG P   G+PG+ G +G  G +G PG QG+ G  G+ G            
Sbjct: 1134 EMGPQGPPGAVGEP---GLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDGGPAGPDG 1190

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             KGD G PG  G  G  G  G  G DG PG  G+ G+ G +G PG+ G  G  G  G KG
Sbjct: 1191 LKGDRGDPGPDGERGDKGQEGLKGEDGPPGPPGITGVRGPEGKPGRQGEKGRTGAKGAKG 1250

Query: 243  MTG 245
              G
Sbjct: 1251 YQG 1253



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 71/173 (41%), Gaps = 60/173 (34%)

Query: 139  KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG------- 191
            +GA G+ GP GP G  G++G RG KG     GPQG PG  G++G  G+ G+ G       
Sbjct: 1048 RGAKGLRGPRGPDGPAGEQGSRGLKGPS---GPQGRPGQPGQQGAAGERGHSGVRGFPGI 1104

Query: 192  -----------------------------RIGLDGRDGLPGEPGLDGIPGRNGMD----- 217
                                          +G  G  G  GEPGL   PG  GM      
Sbjct: 1105 PGPSGPPGTKGLPGEPGPQGPQGPLGPPGEMGPQGPPGAVGEPGL---PGEAGMKGDLGP 1161

Query: 218  -GIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGING 257
             G PG+ GL G+ G PG              G  G+ G  G RG++G+ G+ G
Sbjct: 1162 LGTPGEQGLIGQRGEPGLEGDGGPAGPDGLKGDRGDPGPDGERGDKGQEGLKG 1214



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 82/225 (36%), Gaps = 75/225 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PG  GP G KGE G  G  G  GE+G  G  G+VG PG   I G++G RG          
Sbjct: 958  PGRPGPDGVKGEPGDPGRPGPVGEQGLLGFIGLVGEPG---IMGEKGDRGMMGPPGAPGP 1014

Query: 163  KGDMGYP---------------------------GPQGIPGDEGKRGPKGDMGYPGRIGL 195
            KG MG+P                           G +G+ G  G  GP G+ G  G  G 
Sbjct: 1015 KGSMGHPGTPGAVGTPGEPGPRGPPGSRGPPGMRGAKGLRGPRGPDGPAGEQGSRGLKGP 1074

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIP----------------------------------- 220
             G  G PG+PG  G  G  G  G+                                    
Sbjct: 1075 SGPQGRPGQPGQQGAAGERGHSGVRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPLGPPGE 1134

Query: 221  -GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G PG  G PG  G  G KG  GP G  G+ G+ G  G P +
Sbjct: 1135 MGPQGPPGAVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGL 1179



 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 68/170 (40%), Gaps = 51/170 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------KGDM 166
            G QGP G  GE G  GE G+KG+ G  G PG  G  G +G PG EG  GP      KGD 
Sbjct: 1136 GPQGPPGAVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDGGPAGPDGLKGDR 1195

Query: 167  GYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDG-- 209
            G PGP G  GD+G+ G KG+                G PGR G  GR G  G  G  G  
Sbjct: 1196 GDPGPDGERGDKGQEGLKGEDGPPGPPGITGVRGPEGKPGRQGEKGRTGAKGAKGYQGQL 1255

Query: 210  ----------------------------IPGRNGMDGIPGKDGLPGKDGI 231
                                         PGR G  G PG  G  G  G+
Sbjct: 1256 GEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGV 1305



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 89/247 (36%), Gaps = 100/247 (40%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------------PQGIPG 155
            PPG  G  G  GE G KG++G  G  GE+G  G  G PG                +G PG
Sbjct: 1140 PPGAVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDGGPAGPDGLKGDRGDPG 1199

Query: 156  DEGKRGPKGDMGYP---------------GPQGIPGDEGKR---GPKGDMGYPGRI---- 193
             +G+RG KG  G                 GP+G PG +G++   G KG  GY G++    
Sbjct: 1200 PDGERGDKGQEGLKGEDGPPGPPGITGVRGPEGKPGRQGEKGRTGAKGAKGYQGQLGEMG 1259

Query: 194  -----------------------GLDGRDGLPGEPGLDGIPGRNGM-------------- 216
                                   G  GR G  GEPGL G  G  G+              
Sbjct: 1260 VPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGVMGPLGPPGPKGEKG 1319

Query: 217  --------------------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                                       G PG  G PG++G+ G  G  G++G+ G  G R
Sbjct: 1320 EQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGDPGQQGLPGHPGPR 1379

Query: 251  GKSGING 257
            G+ G  G
Sbjct: 1380 GRPGPKG 1386


>gi|355701098|gb|EHH29119.1| Collagen alpha-1(IV) chain, partial [Macaca mulatta]
          Length = 1645

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 101/199 (50%), Gaps = 28/199 (14%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA--PGVVGPPGPQGI- 153
            V   G   +  E   PG+ GP G  G  G KG  G KG+ G  G   PG+ G  G QGI 
Sbjct: 989  VGGMGLPGTPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIA 1048

Query: 154  --PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
              PG  G++G KG +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIP
Sbjct: 1049 GFPGSPGEKGEKGSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIP 1105

Query: 212  GRNGMDGIP---------GKDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRG 251
            G  G  G+P         G+ G PG DGIPG+ G  GE G+            G +G++G
Sbjct: 1106 GVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKG 1165

Query: 252  KSGINGVPGTPAICAYKRE 270
            + G  G+ G+P I   K E
Sbjct: 1166 EVGFPGLAGSPGIPGSKGE 1184



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 839 PGQQGSPGIPGFPGSKGEMGVMGTPGQPGSPGPVGVPG---LPGE------KGDHGFPGS 889

Query: 172 QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
            G  GD G +G KGD+G PG+                        IG  G  G  G+PG 
Sbjct: 890 SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 949

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 950 PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 999



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 91/196 (46%), Gaps = 38/196 (19%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 936  GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 995

Query: 167  ---------GYPGPQGIPGDEGKRGPKGDM-----------GYPGRIGLDGRDGLPGEP- 205
                     G PGPQG PG +G++G KG             G PG  G  G  G PG P 
Sbjct: 996  GTPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIAGFPGSPG 1055

Query: 206  --------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                    G+ G+PG  G+ G PG  G PG  G+PG  G  G  G+ G  G +G++G+ G
Sbjct: 1056 EKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPG 1115

Query: 258  VPGTPAICAYKRESCS 273
             PG       K E  S
Sbjct: 1116 TPGPTGPAGQKGEPGS 1131



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 93/185 (50%), Gaps = 35/185 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVG-P--PGPQGI 153
            PG  G  GQ G+ G KG+ G+ G  G  G                PG  G P  PGPQG 
Sbjct: 953  PGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGS 1012

Query: 154  PGDEGKRGPKGDMGYPGPQ--GIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEP 205
            PG +G++G KG  G  GP   GIPG  G++G +G  G+PG  G  G        G+PG P
Sbjct: 1013 PGLQGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSP 1072

Query: 206  GLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGIN 256
            GL G PG  G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G +
Sbjct: 1073 GLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSD 1132

Query: 257  GVPGT 261
            G+PG+
Sbjct: 1133 GIPGS 1137



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 84/170 (49%), Gaps = 24/170 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGP 162
            PG  GP+G  G  G KG+ G  G  G +G PG+ G  G  G+PG  G          +G 
Sbjct: 866  PGSPGPVGVPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQ 925

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-- 220
            KGD G    +G  G  G++G +GD G PG  G DG+ G PG+PG  G PG +G  G P  
Sbjct: 926  KGDQGE---KGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGL 982

Query: 221  ----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      G  G PG+ G+PG  G  G  G+ G +G +G  G  G PG
Sbjct: 983  PGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGPPG 1032



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 89/179 (49%), Gaps = 31/179 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMGY 168
           PGL  P G KG+ G++G  GV G+ G  G PG  G PG  G PG +G+ G     G  G 
Sbjct: 810 PGLDMP-GPKGDKGSQGLPGVTGQSGLPGLPGQQGSPGIPGFPGSKGEMGVMGTPGQPGS 868

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD---------- 217
           PGP G+PG  G+   KGD G+PG  G  G  GL G+ G  G+PG+ G MD          
Sbjct: 869 PGPVGVPGLPGE---KGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQ 925

Query: 218 -------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                        G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 926 KGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 984



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 96/220 (43%), Gaps = 38/220 (17%)

Query: 44   KGDIFDNSVPQTPHVEFVP--------PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIP 95
            KG +    +P TP  + VP        P L  E   +  + Q                 P
Sbjct: 986  KGSVGGMGLPGTPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGP--------------P 1031

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
             + + G      +    G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG
Sbjct: 1032 GIGIPGLPGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPG 1091

Query: 156  DEGKRG-------P--KGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            ++G +G       P  KG+ G PG   P G     G++G  G  G PG  G  G  GLPG
Sbjct: 1092 EKGDKGLPGLDGIPGVKGEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPG 1148

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
              G  G PG  G  G  G+ G PG  G PG  G+ GE+G 
Sbjct: 1149 R-GFPGFPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGF 1187



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 66/125 (52%), Gaps = 19/125 (15%)

Query: 111 PPGL--QGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQGIPGDEGKRGPK 163
           PPG+  Q  + +KG+   KGE G KGE G +G PGV      G PGP+G PG +G +G K
Sbjct: 215 PPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEK 274

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGEPGLDGIP 211
           G  G+PG  G PG  G++GP+G+ G              G +G  G  G PG PG  G P
Sbjct: 275 GSPGFPGEPGYPGLVGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGIPGPRGEP 334

Query: 212 GRNGM 216
           G  G 
Sbjct: 335 GPKGF 339



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 90/197 (45%), Gaps = 54/197 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG  GP GQKGE G+ G  G  GE+GE G PG   P    G PG +G +G KG++G+PG 
Sbjct: 1117 PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGFPGL 1172

Query: 171  --PQGIPGDEGKRG-----------------------PKGD---------------MGYP 190
                GIPG +G++G                       PKGD               MG P
Sbjct: 1173 AGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPP 1232

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPR 247
            G  G+DG  G  G PG  G PG      +PG  G PG  G+PG  G+    G KG  GP 
Sbjct: 1233 GLPGIDGVKGDKGNPGWPGAPG------VPGPKGDPGFQGMPGIGGSPGITGSKGDMGPP 1286

Query: 248  GNRGKSGINGVPGTPAI 264
            G  G  G  GVPG   I
Sbjct: 1287 GVPGFQGPKGVPGLQGI 1303



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 66/130 (50%), Gaps = 27/130 (20%)

Query: 157 EGKRGPKGDMGYPGPQGIPGD-----------EGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           +G +G KGD G  GP G+PG            +G++G KG+ G+ G  G+ G  G PG+P
Sbjct: 201 QGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGV-GEKGEPGKP 259

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKG------------MTGPRGNR 250
           G  G PG++G  G  G  G PG+ G P   G  G  GEKG             TGP G +
Sbjct: 260 GPRGKPGKDGDKGEKGSPGFPGEPGYPGLVGRQGPQGEKGEAGPPGPPGIVIGTGPLGEK 319

Query: 251 GKSGINGVPG 260
           G+ G  G+PG
Sbjct: 320 GERGYPGIPG 329



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 54/105 (51%), Gaps = 17/105 (16%)

Query: 123 EIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI----- 174
           EIG  G+ G KG+RG     G  GV   PGPQG PG  G+ G KG+ G      I     
Sbjct: 463 EIGFPGQPGAKGDRGLPGRDGVAGV---PGPQGTPGLIGQPGAKGEPGE-----IYFDLR 514

Query: 175 -PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GD+G  G  G  G PGR G  GRDG PG PG  G PG  G+ G
Sbjct: 515 LKGDKGDPGFPGQPGMPGRAGSPGRDGRPGLPGPKGSPGSVGLKG 559



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 61/145 (42%), Gaps = 52/145 (35%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 620 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 679

Query: 184 KGDM------------GYPGR-----------IGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GDM            G PG            +GL G  GLPG PG+ G PG  G  G+P
Sbjct: 680 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVP 739

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTG 245
                    GIPG +G  G  G+ G
Sbjct: 740 ---------GIPGEHGAIGPPGLQG 755


>gi|149057575|gb|EDM08818.1| procollagen, type IV, alpha 1, isoform CRA_a [Rattus norvegicus]
          Length = 1098

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 104/202 (51%), Gaps = 34/202 (16%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQG-- 152
           V   G   S  E   PG+ G    +G  G+ GE G KGE+G+ G PG+   G PG +G  
Sbjct: 442 VGGMGLPGSPGEKGVPGIPG---SQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQ 498

Query: 153 ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                PG  G++G KG  G PG   +PG  G RG  G++G+PG  GL G  G  G PGLD
Sbjct: 499 GLAGFPGSPGEKGEKGSAGTPG---MPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLD 555

Query: 209 GIPGRNGMDGIPG---------KDGLPGKDGIPGTNGTNGEKGMT-----------GPRG 248
           G+PG  G  G+PG         + G PG DGIPG+ G  GE+G+            G +G
Sbjct: 556 GVPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEQGLPGRGFPGFPGTKGDKG 615

Query: 249 NRGKSGINGVPGTPAICAYKRE 270
           ++G+ G  G+ G+P I   K E
Sbjct: 616 SKGEVGFPGLAGSPGIPGAKGE 637



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/157 (45%), Positives = 88/157 (56%), Gaps = 19/157 (12%)

Query: 119 GQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GQKG+ G KG++G    KG RG+ G PGV   PG  G  G  G+ GPKGD   PG  GIP
Sbjct: 377 GQKGDQGEKGQIGPTGDKGSRGDPGTPGV---PGKDGQAGHPGQPGPKGD---PGLSGIP 430

Query: 176 GDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G  GPKG    MG PG  G  G  G+PG  G+ G PG  G  G  G+ GLPG  GIP
Sbjct: 431 GSPGLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGI-GIP 489

Query: 233 GTNGTNGEKGMT------GPRGNRGKSGINGVPGTPA 263
           G  G  G++G+       G +G +G +G  G+PG+P 
Sbjct: 490 GRPGDKGDQGLAGFPGSPGEKGEKGSAGTPGMPGSPG 526



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 86/171 (50%), Gaps = 26/171 (15%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
           GP G KG  G  G  GV G+ G+ G PG  GP   PG  GIPG  G  GPKG +      
Sbjct: 389 GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGIPGSPGLPGPKGSVGGMGLP 448

Query: 167 ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
                    G PG QG+PG  G++G KG+        +G PGR G  G  GL G PG  G
Sbjct: 449 GSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPG 508

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G PG  G PG  G PG  G  G  G+ G +G++G  G++GVPG
Sbjct: 509 EKGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLDGVPG 559



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 96/186 (51%), Gaps = 27/186 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGY 168
           PG QG  G  G  G+KGEMGV G  G+ G+PG  G PG  G  GD G     GP+GD G+
Sbjct: 292 PGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGAPGLPGEKGDHGFPGSSGPRGDPGF 351

Query: 169 PGPQG---IPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G +G   +PG  G          +G KGD G  G+IG  G  G  G+PG  G+PG++G 
Sbjct: 352 KGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQ 411

Query: 217 DGIPGK---------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI---NGVPGTPAI 264
            G PG+          G+PG  G+PG  G+ G  G+ G  G +G  GI    GVPG+P  
Sbjct: 412 AGHPGQPGPKGDPGLSGIPGSPGLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGE 471

Query: 265 CAYKRE 270
              K E
Sbjct: 472 KGAKGE 477



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 83/175 (47%), Gaps = 23/175 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------- 155
           PG  GP G  G  G KG+ G  G  G +G PG  G  G  G+PG                
Sbjct: 319 PGSPGPAGAPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQ 378

Query: 156 -----DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
                ++G+ GP GD G  G  G PG  GK G  G  G PG  G  G  G+PG PGL G 
Sbjct: 379 KGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGIPGSPGLPGP 438

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN--GVPGTPA 263
            G  G  G+PG  G  G  GIPG+ G  G  G  G +G +G+SG+   G+PG P 
Sbjct: 439 KGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPG 493



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 90/188 (47%), Gaps = 45/188 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG  GP GQKGE G+ G  G  GE+GE+G PG   P    G PG +G +G KG++G+PG 
Sbjct: 570 PGPTGPAGQKGEPGSDGIPGSAGEKGEQGLPGRGFP----GFPGTKGDKGSKGEVGFPGL 625

Query: 171 --PQGIPGDEGKRG-----------------------PKGDMG---------------YP 190
               GIPG +G++G                       PKGD G                P
Sbjct: 626 AGSPGIPGAKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPP 685

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G+DG  G  G PG  G PG  G  G PG  G+PG  G PG  G+ G+ G  G  G +
Sbjct: 686 GFPGIDGPKGDKGNPGWPGAPGAPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQ 745

Query: 251 GKSGINGV 258
           G+ G+ G+
Sbjct: 746 GQKGLPGL 753



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 71/148 (47%), Gaps = 24/148 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G KG++G +G PG+ G  G  G+PG +G          PG  G PG +G+ G  G  G P
Sbjct: 269 GPKGDKGSQGLPGLTGQSGLPGLPGQQG---------TPGVPGFPGSKGEMGVMGTPGQP 319

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT------------- 237
           G  G  G  GLPGE G  G PG +G  G PG  G  G  G+PG  G+             
Sbjct: 320 GSPGPAGAPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQK 379

Query: 238 --NGEKGMTGPRGNRGKSGINGVPGTPA 263
              GEKG  GP G++G  G  G PG P 
Sbjct: 380 GDQGEKGQIGPTGDKGSRGDPGTPGVPG 407



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 83/195 (42%), Gaps = 56/195 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP GQKGE G    +G+ G +G+ G P         GIPG  G++G  G  G PG 
Sbjct: 151 PGNPGPQGQKGEPG----IGLPGLKGQPGLP---------GIPGTPGEKGSIGGPGVPGE 197

Query: 172 QGIPGDEGKRGPKGDMGYPG--------------------------------RIGLDGRD 199
           QG+ G  G +G +GD G PG                                  G+ G  
Sbjct: 198 QGLTGPPGLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEK 257

Query: 200 GLPGEPGLD-----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           G PG PGLD           G+PG  G  G+PG  G  G  G+PG  G+ GE G+ G  G
Sbjct: 258 GFPGFPGLDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPG 317

Query: 249 NRGKSGINGVPGTPA 263
             G  G  G PG P 
Sbjct: 318 QPGSPGPAGAPGLPG 332



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 59/115 (51%), Gaps = 23/115 (20%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD--------G 218
           G PG  G+PG  G  GP+G  G PG IG   R G PG PG +G+PG  G          G
Sbjct: 110 GPPGAAGLPGSPGFPGPQGVDGLPGEIG---RPGSPGRPGFNGLPGNPGPQGQKGEPGIG 166

Query: 219 IPGKDGLPGKDGIPGTNGTN---------GEKGMTGPRGNRGKSGINGVPGTPAI 264
           +PG  G PG  GIPGT G           GE+G+TGP G +   GI G PG P +
Sbjct: 167 LPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQ---GIRGDPGPPGV 218



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 83/206 (40%), Gaps = 52/206 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G  G  G  GV G  GE G PG  G PG  G+PG+ G +G KG+ G    
Sbjct: 109 PGPPGAAGLPGSPGFPGPQGVDGLPGEIGRPGSPGRPGFNGLPGNPGPQGQKGEPGI--- 165

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------ 225
            G+PG +G+ G  G  G PG  G  G  G+PGE GL G PG  G+ G PG  G+      
Sbjct: 166 -GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGIRGDPGPPGVQGPAGP 224

Query: 226 --------------------------------------PGKDGIPGTNGTNGEKGMTGPR 247
                                                 PG D +PG  G  G +G+ G  
Sbjct: 225 PGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLD-MPGPKGDKGSQGLPGLT 283

Query: 248 GNRGKSGI---NGVPGTPAICAYKRE 270
           G  G  G+    G PG P     K E
Sbjct: 284 GQSGLPGLPGQQGTPGVPGFPGSKGE 309


>gi|402854081|ref|XP_003891708.1| PREDICTED: collagen alpha-2(IX) chain [Papio anubis]
          Length = 449

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 92/167 (55%), Gaps = 21/167 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPG------DEGKRGP 162
           PG++G  GQ G  G+ G  G   V G+ G KG PG  G PGPQG+PG       EG+ GP
Sbjct: 75  PGMKGSAGQAGRPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGP 134

Query: 163 KGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G++   GPQGI    GD+G+RGP G  G  GR G  G  G PG PG  G+PG  G  G 
Sbjct: 135 RGEI---GPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGSPGIPGPQGLPGIKGNKGS 191

Query: 220 PGKDGL------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PGK G       PG  G+PG  G  GE G  GP+G +G  G  G PG
Sbjct: 192 PGKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPG 238



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 93/179 (51%), Gaps = 12/179 (6%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            M+G          PG QG  G  G+ G KG  G +GE G +G PG  GPPG +G PG  
Sbjct: 76  GMKGSAGQAGRPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPR 135

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ GP      KGD G  GP G PG +G++GPKG+ G P   G+ G  GLPG  G  G P
Sbjct: 136 GEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGSP---GIPGPQGLPGIKGNKGSP 192

Query: 212 GRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           G+ G  G    PG  GLPG+ G  G +G  G KG  G RG  G  G +G  G P +  Y
Sbjct: 193 GKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGY 251



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 88/165 (53%), Gaps = 21/165 (12%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---G 167
           PPG +G  G +GEIG +G MG KG++GE+         GP G PG +G++GPKG+    G
Sbjct: 125 PPGKEGEPGPRGEIGPQGIMGQKGDQGER---------GPVGQPGPQGRQGPKGEQGSPG 175

Query: 168 YPGPQGIP------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            PGPQG+P      G  GK GP+G +G PG  GL G     GE G  G PG  G  G+ G
Sbjct: 176 IPGPQGLPGIKGNKGSPGKTGPRGGVGDPGVAGLPGEK---GEKGESGEPGPKGQQGVRG 232

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           + G PG  G  G  G  G  G+ GPRG  G  G  G PG   +  
Sbjct: 233 EPGYPGPSGDAGAPGVQGYPGLPGPRGLVGNRGFPGQPGRQGVAG 277



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/156 (44%), Positives = 84/156 (53%), Gaps = 6/156 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G  G+ G  G  G+KG  G+ G PG  G  G  G+PG  G +G  GD G PG
Sbjct: 56  PKGATGPPGINGKDGTPGTPGMKGSAGQAGRPGSPGHQGLAGVPGQPGTKGGPGDQGEPG 115

Query: 171 PQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           PQG+      PG EG+ GP+G++G  G +G  G  G  G  G  G  GR G  G  G  G
Sbjct: 116 PQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGSPG 175

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +PG  G+PG  G  G  G TGPRG  G  G+ G+PG
Sbjct: 176 IPGPQGLPGIKGNKGSPGKTGPRGGVGDPGVAGLPG 211



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 73/136 (53%), Gaps = 12/136 (8%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGI 153
           QG      +  P G QGP G++G  G  G  G+ G +G KG+PG  GP      PG  G+
Sbjct: 150 QGERGPVGQPGPQGRQGPKGEQGSPGIPGPQGLPGIKGNKGSPGKTGPRGGVGDPGVAGL 209

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG++G++G  G+ G  G QG+ G+ G  GP GD G P      G  G PG PG  G+ G 
Sbjct: 210 PGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAP------GVQGYPGLPGPRGLVGN 263

Query: 214 NGMDGIPGKDGLPGKD 229
            G  G PG+ G+ G+D
Sbjct: 264 RGFPGQPGRQGVAGRD 279



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 56/103 (54%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G RGP+G  G  G  G PG  GK G  G  G  G  G  GR G PG  GL G+PG+ 
Sbjct: 43  GSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGRPGSPGHQGLAGVPGQP 102

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G PG  G PG  G+PG +G  G++G  GPRG  G  GI G
Sbjct: 103 GTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMG 145



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 69/143 (48%), Gaps = 24/143 (16%)

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
           +G+PG+ GP   QGI G +G  GP G  G  G  G PG +G  G  G  G PG  GL G 
Sbjct: 42  QGSPGIRGP---QGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGRPGSPGHQGLAGV 98

Query: 199 DGLPG---------EPGLDGIPGRNGMDGIPGKDGLP------GKDGIPGTNGTNGEK-- 241
            G PG         EPG  G+P   G  G PGK+G P      G  GI G  G  GE+  
Sbjct: 99  PGQPGTKGGPGDQGEPGPQGLP---GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGP 155

Query: 242 -GMTGPRGNRGKSGINGVPGTPA 263
            G  GP+G +G  G  G PG P 
Sbjct: 156 VGQPGPQGRQGPKGEQGSPGIPG 178


>gi|260801193|ref|XP_002595480.1| hypothetical protein BRAFLDRAFT_69134 [Branchiostoma floridae]
 gi|229280727|gb|EEN51492.1| hypothetical protein BRAFLDRAFT_69134 [Branchiostoma floridae]
          Length = 712

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 83/152 (54%)

Query: 103 CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           C +      PG +G +G KGE G +G  G +GERG  G  G VGPPG  G  G  G+ G 
Sbjct: 41  CTNITVVAEPGPKGDVGPKGEAGPRGARGARGERGRMGLVGAVGPPGAPGRTGTTGRPGE 100

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G PG +G+ GD+G  G  G  G PG  G  G  GLPG  G  G+PG  G+ G  G+
Sbjct: 101 KGEPGPPGLKGVEGDQGPPGGYGATGSPGNRGQPGAQGLPGPTGSKGMPGDQGLPGEKGE 160

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G  G  G+PG  GT G+ G  G  G +G+ G
Sbjct: 161 KGELGVQGLPGWKGTKGDTGDPGSPGEKGEKG 192



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 88/181 (48%), Gaps = 32/181 (17%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPGL+G  GQKG  G  G+ GV G  G  G PG VG  G +G+ GD G+    G  G PG
Sbjct: 315 PPGLRGLPGQKGNRGTPGQAGVNGVPGAPGEPG-VGLRGEKGMKGDPGE---TGGAGSPG 370

Query: 171 PQGIPGDEGK-----------------------RGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           P G+ GD+G+                        G KG+ G  G+ G  G  G+PG PG+
Sbjct: 371 PTGVKGDKGEPGEISARTLSLLQSESVGHRAAPGGEKGEKGASGKPGARGSPGIPGHPGV 430

Query: 208 D-----GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                 G+PG  G  G PG+ G  G+ G  G  G+ G  G  G +G++G+ G  G PG P
Sbjct: 431 QGRPGVGLPGEKGAKGDPGRKGETGRTGERGAKGSAGASGSPGEKGSKGEEGKTGYPGLP 490

Query: 263 A 263
            
Sbjct: 491 G 491



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 87/203 (42%), Gaps = 41/203 (20%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM---------------GVKGERGEKGAP 142
            + GF     +    G  GP GQKG  G  G+                G+ G++G +G P
Sbjct: 272 GLPGFKGDQGDPGEAGEAGPPGQKGSKGDTGKTGPSGLSFAAGPPGLRGLPGQKGNRGTP 331

Query: 143 GVVGPPGPQGIPGDEGK--RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------- 193
           G  G  G  G PG+ G   RG KG  G PG  G  G  G  G KGD G PG I       
Sbjct: 332 GQAGVNGVPGAPGEPGVGLRGEKGMKGDPGETGGAGSPGPTGVKGDKGEPGEISARTLSL 391

Query: 194 ----------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
                           G  G  G PG  G  GIPG  G+ G PG  GLPG+ G  G  G 
Sbjct: 392 LQSESVGHRAAPGGEKGEKGASGKPGARGSPGIPGHPGVQGRPGV-GLPGEKGAKGDPGR 450

Query: 238 NGEKGMTGPRGNRGKSGINGVPG 260
            GE G TG RG +G +G +G PG
Sbjct: 451 KGETGRTGERGAKGSAGASGSPG 473



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/136 (47%), Positives = 77/136 (56%), Gaps = 6/136 (4%)

Query: 112 PGLQG--PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           PG+QG   +G  GE GAKG+ G KGE G  G  G  G  G  G PG++G +G +G  GYP
Sbjct: 428 PGVQGRPGVGLPGEKGAKGDPGRKGETGRTGERGAKGSAGASGSPGEKGSKGEEGKTGYP 487

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G  GDEGK G KGD G PG  G+ G  G  G P    + G  G  G PG+ G PG +
Sbjct: 488 GLPGRLGDEGKPGYKGDTGVPGPPGVQGPPGERGTP----VKGDKGDKGRPGETGAPGAN 543

Query: 230 GIPGTNGTNGEKGMTG 245
           G PG +G  G+KG  G
Sbjct: 544 GQPGISGQKGDKGDAG 559



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 21/121 (17%)

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGY---------PGRIGLDGR---DGLPGEPGLD 208
           GPKGD+G  G  G  G  G RG +G MG          PGR G  GR    G PG PGL 
Sbjct: 51  GPKGDVGPKGEAGPRGARGARGERGRMGLVGAVGPPGAPGRTGTTGRPGEKGEPGPPGLK 110

Query: 209 GI------PGRNGMDGIPGKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVP 259
           G+      PG  G  G PG  G PG  G+PG  G+    G++G+ G +G +G+ G+ G+P
Sbjct: 111 GVEGDQGPPGGYGATGSPGNRGQPGAQGLPGPTGSKGMPGDQGLPGEKGEKGELGVQGLP 170

Query: 260 G 260
           G
Sbjct: 171 G 171



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 100/237 (42%), Gaps = 65/237 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG--------------------ERGEKGAPG-------- 143
           PG +G  G  G+ G+ GE G KG                    E+G KG PG        
Sbjct: 170 PGWKGTKGDTGDPGSPGEKGEKGSPGVEGSPGPPGPPGVGLSGEKGNKGEPGQGQANPMA 229

Query: 144 ----VVGPPGPQGIPGDEGKRGP------------------------KGDMGYPGPQGIP 175
                 G PG +G+PG++G +G                         KGD G PG  G  
Sbjct: 230 LSFLTPGAPGSRGLPGEKGNKGDTGQTGADGSPGPPGPAGVRGLPGFKGDQGDPGEAGEA 289

Query: 176 GDEGKRGPKGDMGYPGRIGLD------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G++G KGD G  G  GL       G  GLPG+ G  G PG+ G++G+PG  G PG  
Sbjct: 290 GPPGQKGSKGDTGKTGPSGLSFAAGPPGLRGLPGQKGNRGTPGQAGVNGVPGAPGEPGV- 348

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           G+ G  G  G+ G TG  G+ G +G+ G  G P   + +  + SLL +        P
Sbjct: 349 GLRGEKGMKGDPGETGGAGSPGPTGVKGDKGEPGEISAR--TLSLLQSESVGHRAAP 403



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 100/245 (40%), Gaps = 92/245 (37%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  PPGL+G  G +G  G  G  G  G RG+ GA G+ GP G +G+PGD+G  G KG+ G
Sbjct: 103 EPGPPGLKGVEGDQGPPGGYGATGSPGNRGQPGAQGLPGPTGSKGMPGDQGLPGEKGEKG 162

Query: 168 YPGPQGIP---------------GDEGKRGP--------------------KGDMGYPGR 192
             G QG+P               G++G++G                     KG+ G PG+
Sbjct: 163 ELGVQGLPGWKGTKGDTGDPGSPGEKGEKGSPGVEGSPGPPGPPGVGLSGEKGNKGEPGQ 222

Query: 193 I------------GLDGRDGLPGEPG---------------------LDGIPGRNGMDGI 219
                        G  G  GLPGE G                     + G+PG  G  G 
Sbjct: 223 GQANPMALSFLTPGAPGSRGLPGEKGNKGDTGQTGADGSPGPPGPAGVRGLPGFKGDQGD 282

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGP---------------------RGNRGKSGINGV 258
           PG+ G   + G PG  G+ G+ G TGP                     RG  G++G+NGV
Sbjct: 283 PGEAG---EAGPPGQKGSKGDTGKTGPSGLSFAAGPPGLRGLPGQKGNRGTPGQAGVNGV 339

Query: 259 PGTPA 263
           PG P 
Sbjct: 340 PGAPG 344



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 74/165 (44%), Gaps = 35/165 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G+KGE G  G  GV+G++G  G  G  G PG +G PG +G  GP G  G PG Q
Sbjct: 93  GTTGRPGEKGEPGPPGLKGVEGDQGPPGGYGATGSPGNRGQPGAQGLPGPTGSKGMPGDQ 152

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG-------------------- 212
           G+PG++G++G  G  G PG  G  G  G PG PG  G  G                    
Sbjct: 153 GLPGEKGEKGELGVQGLPGWKGTKGDTGDPGSPGEKGEKGSPGVEGSPGPPGPPGVGLSG 212

Query: 213 RNGMDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTG 245
             G  G PG+             G PG  G+PG  G    KG TG
Sbjct: 213 EKGNKGEPGQGQANPMALSFLTPGAPGSRGLPGEKGN---KGDTG 254



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 48/92 (52%), Gaps = 6/92 (6%)

Query: 175 PGDEGKRGPKGDM---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PG +G  GPKG+    G  G  G  GR GL G  G  G PGR G  G PG+ G PG  G+
Sbjct: 50  PGPKGDVGPKGEAGPRGARGARGERGRMGLVGAVGPPGAPGRTGTTGRPGEKGEPGPPGL 109

Query: 232 PGTNGTNGEK---GMTGPRGNRGKSGINGVPG 260
            G  G  G     G TG  GNRG+ G  G+PG
Sbjct: 110 KGVEGDQGPPGGYGATGSPGNRGQPGAQGLPG 141



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 49/114 (42%), Gaps = 35/114 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDM-- 166
           PG +G  G+ GE GAKG  G  G  GEKG+ G  G  G  G+PG   DEGK G KGD   
Sbjct: 448 PGRKGETGRTGERGAKGSAGASGSPGEKGSKGEEGKTGYPGLPGRLGDEGKPGYKGDTGV 507

Query: 167 ------------------------------GYPGPQGIPGDEGKRGPKGDMGYP 190
                                         G PG  G PG  G++G KGD G P
Sbjct: 508 PGPPGVQGPPGERGTPVKGDKGDKGRPGETGAPGANGQPGISGQKGDKGDAGRP 561


>gi|426376003|ref|XP_004054800.1| PREDICTED: collagen alpha-1(IV) chain [Gorilla gorilla gorilla]
          Length = 1642

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 37/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            PG QG  G  G+ GAKGE        +G+ G RGEKG  G+ G       PG  G++G K
Sbjct: 1004 PGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAG------FPGSPGEKGEK 1057

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
            G +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIPG  G  G+PG  
Sbjct: 1058 GSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTP 1114

Query: 222  -------KDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRGKSGINGVPGTPA 263
                   + G PG DGIPG+ G  GE G+            G +G++G+ G  G+ G+P 
Sbjct: 1115 GPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPG 1174

Query: 264  ICAYKRE 270
            I   K E
Sbjct: 1175 IPGSKGE 1181



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 836 PGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPG---LPGE------KGDHGFPGS 886

Query: 172 QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
            G  GD G +G KGD+G PG+                        IG  G  G  G+PG 
Sbjct: 887 SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 946

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 947 PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 996



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 82/153 (53%), Gaps = 29/153 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD   PG  G PG  
Sbjct: 921  GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD---PGISGTPGAP 977

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GPKG +G     G+    GLPG PG  G+PG      IPG  G PG   +PG  G  
Sbjct: 978  GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGSPG---LPGDKGAK 1019

Query: 239  GEKGMTGP--------RGNRGKSGINGVPGTPA 263
            GEKG  GP        RG +G  GI G PG+P 
Sbjct: 1020 GEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPG 1052



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 91/172 (52%), Gaps = 28/172 (16%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 933  GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 992

Query: 167  ---------GYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                     G PGPQ   G+PGD+G +G KG  G PG IG+ G  G  G+ G+ G PG  
Sbjct: 993  GTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSP 1051

Query: 215  GMD------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G        GIPG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG
Sbjct: 1052 GEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 1103



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 94/186 (50%), Gaps = 37/186 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVG-P--PGPQ-- 151
            PG  G  GQ G+ G KG+ G+ G  G  G                PG  G P  PGPQ  
Sbjct: 950  PGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGS 1009

Query: 152  -GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGE 204
             G+PGD+G +G KG  G PG  GIPG  G++G +G  G+PG  G  G        G+PG 
Sbjct: 1010 PGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGS 1068

Query: 205  PGLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGI 255
            PGL G PG  G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G 
Sbjct: 1069 PGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGS 1128

Query: 256  NGVPGT 261
            +G+PG+
Sbjct: 1129 DGIPGS 1134



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 86/176 (48%), Gaps = 25/176 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL  P G KG+ GA+G  G+ G+ G  G PG  G PG  G PG +G+ G  G  G PG 
Sbjct: 807 PGLDMP-GPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGS 865

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD------------- 217
            G  G  G  G KGD G+PG  G  G  GL G+ G  G+PG+ G MD             
Sbjct: 866 PGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGD 925

Query: 218 ----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                     G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 926 QGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 981



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 75/143 (52%), Gaps = 16/143 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-------P--K 163
            G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG++G +G       P  K
Sbjct: 1046 GFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVK 1105

Query: 164  GDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+ G PG   P G     G++G  G  G PG  G  G  GLPG  G  G PG  G  G  
Sbjct: 1106 GEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPGR-GFPGFPGAKGDKGSK 1161

Query: 221  GKDGLPGKDGIPGTNGTNGEKGM 243
            G+ G PG  G PG  G+ GE+G 
Sbjct: 1162 GEVGFPGLAGSPGIPGSKGEQGF 1184



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 58/123 (47%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           EIG  G+ G KG+RG  G  GV G PGPQG PG  G+ G KG+                 
Sbjct: 460 EIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGE----------------- 502

Query: 183 PKGDMGYPGRIGLD----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                  PG I  D    G  G PG PG  G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 503 -------PGEIYFDLRLKGDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLK 555

Query: 239 GEK 241
           GE+
Sbjct: 556 GER 558



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 85/203 (41%), Gaps = 66/203 (32%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP GQKGE G+    G     GE+GE G PG   P    G PG +G +G KG++G+
Sbjct: 1114 PGPTGPAGQKGEPGSDGIPGSA---GEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGF 1166

Query: 169  P---GPQGIPGDEGKR-----------------------GPKGDM--------------- 187
            P   G  GIPG +G++                       GPKGD                
Sbjct: 1167 PGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPM 1226

Query: 188  ---------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                           G PG  G  G  G  G+PG  G+PG  G  GI G  G  G  G+P
Sbjct: 1227 GPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVP 1286

Query: 233  GTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G  G+ G +G++G  G+
Sbjct: 1287 GFQGPKGLPGLQGIKGDQGDQGV 1309



 Score = 43.1 bits (100), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 70/144 (48%), Gaps = 30/144 (20%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 617 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGVPGEKGAVGQPGIGFPGPPGPKGVDGL 676

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGE 240
            GDMG PG  G  G +GLPG PG+ G  G  G+       GLPG     G+PG  GT GE
Sbjct: 677 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGV-------GLPGLKGLPGLPGIPGTPGE 729

Query: 241 KGMTGPRGNRGKSGINGVPGTPAI 264
           KG  G  G  G+ G  G PG   I
Sbjct: 730 KGSIGVPGVPGEHGAIGPPGLQGI 753



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 64/126 (50%), Gaps = 29/126 (23%)

Query: 127 KGEMGV--KGERGEKGAPGVVGPPGPQGIPG--------DEGKRGPKGDMGYPGPQGIPG 176
           KG+MG+  +G +G+KG  GV GPPG   +PG        D   +G KG  G PG QG+PG
Sbjct: 217 KGQMGLSFQGPKGDKGDQGVSGPPG---VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPG 273

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   G+ G PG+ G  G+      PG DG  G  G  G PG+ G P   G+ G  G
Sbjct: 274 -------VGEKGEPGKPGPRGK------PGKDGDKGEKGSPGFPGEPGYP---GLIGRQG 317

Query: 237 TNGEKG 242
             GEKG
Sbjct: 318 PQGEKG 323



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 79/185 (42%), Gaps = 43/185 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
           GL G  G  G  G KG +GV G  GE GA   +GPPG QGI G+ G              
Sbjct: 716 GLPGLPGIPGTPGEKGSIGVPGVPGEHGA---IGPPGLQGIRGEPGPPGLPGSVGSPGVP 772

Query: 160 -------------------------RGPKGDMGYPG--PQGIPGDEGKRGPKGDMGYPGR 192
                                    +G KG  G+PG    G  GD+G +G  G  G  G 
Sbjct: 773 GIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGL 832

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            GL G+ G PG PG  G  G  G+ G PG+ G PG  G PG  G  G+ G  G  G RG 
Sbjct: 833 PGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGD 892

Query: 253 SGING 257
            G+ G
Sbjct: 893 PGLKG 897



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--GIPGRN 214
           +G +G KGD G  GP G+PG + +   KGD    G  G  G  G  G PG+   G PG+ 
Sbjct: 225 QGPKGDKGDQGVSGPPGVPG-QAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKP 283

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G PGKDG  G+ G PG  G  G  G+ G +G +G+ G
Sbjct: 284 GPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKG 323



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 76/176 (43%), Gaps = 57/176 (32%)

Query: 114 LQGPIGQKGEIGAKGEMGV--------------KGERGEKGAPGVVGPPGPQGIPGDEGK 159
            QGP G KG+ G  G  GV              KGE+G+KG PG       QG+PG    
Sbjct: 224 FQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGF------QGMPG---- 273

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG---LDGRDGLPGEPG---------- 206
            G KG+ G PGP+G PG +G +G KG  G+PG  G   L GR G  GE G          
Sbjct: 274 VGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGI 333

Query: 207 -------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                           +PG+ G  G PG+ G  G  G PGT+       + GP G 
Sbjct: 334 VSFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGTS-------LPGPSGR 382


>gi|52346218|ref|NP_001005153.1| collagen alpha-1(X) chain precursor [Sus scrofa]
 gi|7141254|gb|AAF37271.1|AF222861_1 type X collagen [Sus scrofa]
          Length = 675

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 82/152 (53%), Gaps = 14/152 (9%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-----IPGDEGKRGPKGDMGYPGPQ 172
           IG+ G  GA G+ G+ G +G  GAPG+ GPPG  G     +PG +G+RGP          
Sbjct: 264 IGKPGAPGAAGQPGLPGTKGHPGAPGMAGPPGAPGFGKPGLPGLKGQRGPI--------- 314

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG  G +G +G  G+PG  GL G  G  G  G  GIPG NG+ G  G+ GL G  G P
Sbjct: 315 GLPGAPGAKGEQGPAGHPGEPGLTGPPGSRGPQGPKGIPGNNGVPGPKGEIGLAGPAGFP 374

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G  G  G+ G  G  G+ G+NG  G P +
Sbjct: 375 GAKGERGPSGLDGKPGYPGEPGLNGPKGNPGL 406



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/142 (44%), Positives = 73/142 (51%), Gaps = 27/142 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GPIG  G  GAKGE G  G  GE G    PG  GP GP+GIPG+ G  GPKG++G  
Sbjct: 309 GQRGPIGLPGAPGAKGEQGPAGHPGEPGLTGPPGSRGPQGPKGIPGNNGVPGPKGEIGLA 368

Query: 170 GPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPG---------------------EP 205
           GP G PG +G+RGP G     GYPG  GL+G  G PG                       
Sbjct: 369 GPAGFPGAKGERGPSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGIGGPPGLPGPVGPA 428

Query: 206 GLDGIPGRNGMDGIPGKDGLPG 227
           G  G+PG NG  G  G  G+PG
Sbjct: 429 GAKGVPGHNGEAGPRGAPGIPG 450



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 84/184 (45%), Gaps = 29/184 (15%)

Query: 95  PLVAMQGFCNSTKEY-CPPGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGP 150
           P  A Q     TK +   PG+ GP G  G  G  G  G+KG+RG     GAPG  G  GP
Sbjct: 270 PGAAGQPGLPGTKGHPGAPGMAGPPGAPG-FGKPGLPGLKGQRGPIGLPGAPGAKGEQGP 328

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G PG+ G  GP G  G  GP+GIPG+ G  GPKG++G  G  G  G  G  G  GLDG 
Sbjct: 329 AGHPGEPGLTGPPGSRGPQGPKGIPGNNGVPGPKGEIGLAGPAGFPGAKGERGPSGLDGK 388

Query: 211 PGRNGMDGIPGKDGLPG------------------------KDGIPGTNGTNGEKGMTGP 246
           PG  G  G+ G  G PG                          G+PG NG  G +G  G 
Sbjct: 389 PGYPGEPGLNGPKGNPGLPGPKGDPGIGGPPGLPGPVGPAGAKGVPGHNGEAGPRGAPGI 448

Query: 247 RGNR 250
            G R
Sbjct: 449 PGTR 452



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 90/233 (38%), Gaps = 80/233 (34%)

Query: 112 PGLQGPIGQKGE---IGAKGEM--------------------------GVKGERGEKGAP 142
           PGL GP G+ GE    G KG+M                          G  G++G  GAP
Sbjct: 109 PGLPGPQGKPGERGPYGPKGDMGPAGLPGPRGPPGPPGIPGPAGISVTGKPGQQGPAGAP 168

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE------------------------ 178
           G  G PG +G PG  G  G KG+ GY G  G PGD                         
Sbjct: 169 GPRGFPGEKGAPGVPGINGQKGETGY-GAPGRPGDRGLPGPQGPMGPPGPPGVGKRGENG 227

Query: 179 --GKRGPKGDMGYP-----------------------GRIGLDGRDGLPGEPGLDGIPGR 213
             G+ G KGD G+P                       G+ G  G  G PG PG  G PG 
Sbjct: 228 FPGQPGIKGDRGFPGESGPAGPPGPQGPPGEQGREGIGKPGAPGAAGQPGLPGTKGHPGA 287

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            GM G PG  G  GK G+PG  G  G  G+ G  G +G+ G  G PG P +  
Sbjct: 288 PGMAGPPGAPGF-GKPGLPGLKGQRGPIGLPGAPGAKGEQGPAGHPGEPGLTG 339


>gi|119888129|ref|XP_869408.2| PREDICTED: macrophage receptor MARCO isoform 2 [Bos taurus]
 gi|297471800|ref|XP_002685480.1| PREDICTED: macrophage receptor MARCO [Bos taurus]
 gi|296490492|tpg|DAA32605.1| TPA: macrophage receptor with collagenous structure-like [Bos
           taurus]
          Length = 390

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 86/170 (50%), Gaps = 27/170 (15%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGYPG 170
           ++G  G+KG++G KG+MG  G RG+KG  G  G PG  GIPG +G +GP   KG  G+PG
Sbjct: 125 IKGEAGRKGDMGMKGDMGPPGARGDKGDSGKPGFPGVAGIPGIKGDQGPPGMKGLPGFPG 184

Query: 171 PQGIPGD------------------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             G PG                         EG +G KGD G  G+ G  G  G PG  G
Sbjct: 185 AVGSPGAKGDTGSIGPTGPIGPPGLPGTPGVEGVKGSKGDTGLQGQKGTKGESGFPGLSG 244

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           + G  G  G+ G+ G  G  G+ G PG+ G  G +G  G +G +G S ++
Sbjct: 245 VKGEKGSPGLGGLKGAPGPTGQKGEPGSRGATGPQGAKGEKGQKGDSSLS 294



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 58/130 (44%), Gaps = 24/130 (18%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G+ G KGDMG  G  G PG  G +G  G  G+PG  G+ G  G  G PG+ G+PG    
Sbjct: 126 KGEAGRKGDMGMKGDMGPPGARGDKGDSGKPGFPGVAGIPGIKGDQGPPGMKGLPG---- 181

Query: 217 DGIPGKDGLPGKDGIPGT------------------NGTNGEKGMTGPRGNRGKSGINGV 258
              PG  G PG  G  G+                   G  G KG TG +G +G  G +G 
Sbjct: 182 --FPGAVGSPGAKGDTGSIGPTGPIGPPGLPGTPGVEGVKGSKGDTGLQGQKGTKGESGF 239

Query: 259 PGTPAICAYK 268
           PG   +   K
Sbjct: 240 PGLSGVKGEK 249



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 24/126 (19%)

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G  G +G  G KGDMG PG  G  G  G PG PG+ GIPG  G  G PG  GLPG  G 
Sbjct: 126 KGEAGRKGDMGMKGDMGPPGARGDKGDSGKPGFPGVAGIPGIKGDQGPPGMKGLPGFPGA 185

Query: 232 PGTNGTNGEKG------------------MTGPRGNRGKSGINGVPGT------PAICAY 267
            G+ G  G+ G                  + G +G++G +G+ G  GT      P +   
Sbjct: 186 VGSPGAKGDTGSIGPTGPIGPPGLPGTPGVEGVKGSKGDTGLQGQKGTKGESGFPGLSGV 245

Query: 268 KRESCS 273
           K E  S
Sbjct: 246 KGEKGS 251



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/81 (46%), Positives = 44/81 (54%), Gaps = 9/81 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G KGE G  G  GVKGE+G  G  G+ G PGP G  G+ G RG  G      PQ
Sbjct: 226 GLQGQKGTKGESGFPGLSGVKGEKGSPGLGGLKGAPGPTGQKGEPGSRGATG------PQ 279

Query: 173 GIPGDEGKRGPKGDMGYPGRI 193
           G    +G++G KGD     RI
Sbjct: 280 GA---KGEKGQKGDSSLSVRI 297


>gi|354506383|ref|XP_003515242.1| PREDICTED: collagen alpha-1(V) chain-like, partial [Cricetulus
           griseus]
          Length = 1062

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/151 (46%), Positives = 83/151 (54%), Gaps = 24/151 (15%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG+MG+KG+RGE      +GPPGP+G  G EG +G  G  G P
Sbjct: 7   GLKGTKGEKGEDGFPGFKGDMGIKGDRGE------IGPPGPRGEDGPEGPKGRGGPNGDP 60

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G  G++GK G  G  GYPGR G  G  G P               G PG +G  G  
Sbjct: 61  GPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFP---------------GFPGANGEKGGR 105

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G  G++G TGPRG RG  GI G PG
Sbjct: 106 GTPGKPGPRGQRGPTGPRGERGPRGITGKPG 136



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 61/120 (50%), Gaps = 24/120 (20%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
           +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 609 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 665

Query: 174 --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                   +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 666 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGI 725



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 81  PGRQGP---KGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 137

Query: 172 QG 173
           +G
Sbjct: 138 KG 139



 Score = 43.1 bits (100), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 12/94 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           G +GP G+ G  G  G +G  GE+G+ G PG+ G PG QG          PG  G++G +
Sbjct: 46  GPEGPKGRGGPNGDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGR 105

Query: 164 GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIG 194
           G  G PGP+G     G  G+RGP+G  G PG  G
Sbjct: 106 GTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 139



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 27/113 (23%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
           QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG                   
Sbjct: 609 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 668

Query: 156 --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                    +G  GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 669 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 721


>gi|340722701|ref|XP_003399742.1| PREDICTED: collagen alpha-1(XI) chain-like [Bombus terrestris]
          Length = 1805

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 99/196 (50%), Gaps = 42/196 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGER---GEKGAPGVVGPP---GPQGIPGDEGKRGPKGD 165
           PG++G  G +G+ G+ GE G KGER   GEKG  G  G P   GPQGIPG EG  GPK  
Sbjct: 747 PGVRGMKGDEGKRGSPGERGEKGERGPEGEKGDIGTKGEPGLSGPQGIPGLEGLEGPK-- 804

Query: 166 MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG---- 215
            G+ GP+      G+PG++GK GP G +GYPG +G  G  G PG  G  G  G  G    
Sbjct: 805 -GFEGPRGETGLVGLPGEKGKTGPPGFVGYPGNVGEKGDKGQPGREGPSGDKGERGNNGA 863

Query: 216 --------------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGK 252
                                +G+PG  G  G+ G PG  G +G  G+ GPR   G+ G+
Sbjct: 864 SGERGEPGPRGFRGARGRRGAEGLPGPKGDTGQPGPPGLQGESGTPGVEGPRGFVGSPGQ 923

Query: 253 SGINGVPGTPAICAYK 268
           +G+NG  G P     +
Sbjct: 924 AGLNGKDGIPGPSGER 939



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 88/162 (54%), Gaps = 9/162 (5%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           +G  G +G +G+ G+ G  G  G+PG  G PG  G+ G++G +GP+G +G+PG +G+ GD
Sbjct: 696 LGPTGLVGPQGKPGIPGLSGADGSPGHPGNPGVPGMKGEQGPQGPQGPIGFPGVRGMKGD 755

Query: 178 EGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           EGKRG  G+ G  G  G +G     G  GEPGL G  G  G++G+ G  G  G  G  G 
Sbjct: 756 EGKRGSPGERGEKGERGPEGEKGDIGTKGEPGLSGPQGIPGLEGLEGPKGFEGPRGETGL 815

Query: 235 NGTNGEKGMTGP------RGNRGKSGINGVPGTPAICAYKRE 270
            G  GEKG TGP       GN G+ G  G PG       K E
Sbjct: 816 VGLPGEKGKTGPPGFVGYPGNVGEKGDKGQPGREGPSGDKGE 857



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 82/167 (49%), Gaps = 33/167 (19%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE------------------RGEK 139
             + G   +  E  PPGLQGP G KG   A+GE G  GE                  +G++
Sbjct: 1024 GLPGMPGAKGEIGPPGLQGPSGDKG---AQGESGKDGESGPQGKQGPKGPPGPVGLKGDR 1080

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G PG VGP G  G+PG       +G  G PGP G+PG++G    KGD+G PG  G  G  
Sbjct: 1081 GEPGPVGPTGRDGLPGQ------RGLPGAPGPVGVPGEDGD---KGDIGPPGEKGFKGSQ 1131

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
               G P   G PG  G+ G PG  GLPG+ G PG  G  G KG  GP
Sbjct: 1132 AETGPP---GAPGAQGLRGEPGAIGLPGEKGPPGEIGRRGPKGEDGP 1175



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 92/179 (51%), Gaps = 27/179 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G +G IG  G  G+KG+ G++G+PG  G  G +G  G++G  G KG+ G  GPQ
Sbjct: 733 GEQGPQGPQGPIGFPGVRGMKGDEGKRGSPGERGEKGERGPEGEKGDIGTKGEPGLSGPQ 792

Query: 173 GIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPG---RNGMDGIPGKDGLP 226
           GIPG EG  GPKG     G  G +GL G  G  G PG  G PG     G  G PG++G  
Sbjct: 793 GIPGLEGLEGPKGFEGPRGETGLVGLPGEKGKTGPPGFVGYPGNVGEKGDKGQPGREGPS 852

Query: 227 GKDGIPGTNGTNGEKGM------------------TGPRGNRGK---SGINGVPGTPAI 264
           G  G  G NG +GE+G                    GP+G+ G+    G+ G  GTP +
Sbjct: 853 GDKGERGNNGASGERGEPGPRGFRGARGRRGAEGLPGPKGDTGQPGPPGLQGESGTPGV 911



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 83/149 (55%), Gaps = 18/149 (12%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            KGE G  GE    G+ G+ GAPG +GPPG +G+PG  GK+G +G  G  G  G+PG+   
Sbjct: 1314 KGEAGKNGE---DGKAGDPGAPGEIGPPGKEGLPGPAGKQGSEGPAGVQGSPGLPGE--- 1367

Query: 181  RGPKGDMGYP---------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
               KGDMG P         G  GL G  GLPG  GL G+ G NG  G+ G  G PGK G 
Sbjct: 1368 ---KGDMGPPGAQGPPGSIGSQGLPGPSGLPGVRGLPGLAGENGPPGMSGAVGAPGKVGP 1424

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G+KG  G +G+RG+ G  GV G
Sbjct: 1425 VGPKGPKGDKGKRGIKGHRGELGHVGVKG 1453



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 100/244 (40%), Gaps = 75/244 (30%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGA---------KGEMGVKGERGEKGA--------- 141
            +GF  S  E  PPG  G  G +GE GA          GE+G +G +GE G          
Sbjct: 1125 KGFKGSQAETGPPGAPGAQGLRGEPGAIGLPGEKGPPGEIGRRGPKGEDGPVGASGPPGP 1184

Query: 142  ------------------PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
                               G+VGP GP G PG++G RGPKG  G  GP G+ G +G +G 
Sbjct: 1185 VGPQGLPGPSGLKGEVGDTGIVGPVGPAGNPGEQGPRGPKGSEGLQGPPGVEGRQGAKGE 1244

Query: 184  KGDMGYPGRIGLDGRDGLPGEPGLDG------------IPGRNGMDGIP----------- 220
             G +G PG IG +G+ G  G PG  G              G NG +G             
Sbjct: 1245 SGAVGLPGLIGPEGKQGERGPPGPKGEEGKSGPPGPPGSRGINGPEGPKGNAGPPGFPGP 1304

Query: 221  ----------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                            G+DG  G  G PG  G  G++G+ GP G +G  G  GV G+P +
Sbjct: 1305 PGEPGLVGPKGEAGKNGEDGKAGDPGAPGEIGPPGKEGLPGPAGKQGSEGPAGVQGSPGL 1364

Query: 265  CAYK 268
               K
Sbjct: 1365 PGEK 1368



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 98/218 (44%), Gaps = 51/218 (23%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              + G      +  PPG  G  G  GE G KG+ G +G  G+KG  G  G  G +G PG 
Sbjct: 813  TGLVGLPGEKGKTGPPGFVGYPGNVGEKGDKGQPGREGPSGDKGERGNNGASGERGEPGP 872

Query: 157  ------------EGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGL 201
                        EG  GPKGD G PGP G+ G+ G     GP+G +G PG+ GL+G+DG+
Sbjct: 873  RGFRGARGRRGAEGLPGPKGDTGQPGPPGLQGESGTPGVEGPRGFVGSPGQAGLNGKDGI 932

Query: 202  PGEPG------------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            PG  G                  + G  G  G  G PG+ G PG  G PG +G+ GE+G 
Sbjct: 933  PGPSGERGPVGDSGPPGPPGAPGVIGPQGPAGEPGQPGEPGSPGNPGAPGESGSPGEQGK 992

Query: 244  TGPRGNRG------------------KSGINGVPGTPA 263
             GP+G  G                  + G NG+PG P 
Sbjct: 993  EGPQGPPGLQGKEGSPGPGGLPGFPGERGANGLPGMPG 1030



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 96/245 (39%), Gaps = 75/245 (30%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------- 160
           L GP G KGE G  G  G+ G++GE+G    VG  G QG+PG EG +             
Sbjct: 578 LSGPPGMKGEQGVPGLPGLPGDKGERG---FVGATGEQGLPGHEGMQGDDGPPGLPGLPG 634

Query: 161 --------GPKGDMGYPGPQGIPGDEGKRGPKGD-------------------------- 186
                   GP+G  G PG  GIPG EG  G KG+                          
Sbjct: 635 EMGPRGFIGPRGFPGLPGNPGIPGSEGPPGAKGNTGPPGPPGVPGSPGPIGPVGPPGPQG 694

Query: 187 ----------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---------GIPGKDGLPG 227
                      G PG  GL G DG PG PG  G+PG  G           G PG  G+ G
Sbjct: 695 LLGPTGLVGPQGKPGIPGLSGADGSPGHPGNPGVPGMKGEQGPQGPQGPIGFPGVRGMKG 754

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP------GTPAICAYKRESCSLLPNSETS 281
            +G  G+ G  GEKG  GP G +G  G  G P      G P +   +       P  ET 
Sbjct: 755 DEGKRGSPGERGEKGERGPEGEKGDIGTKGEPGLSGPQGIPGLEGLEGPKGFEGPRGETG 814

Query: 282 QLLIP 286
            + +P
Sbjct: 815 LVGLP 819



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 85/202 (42%), Gaps = 63/202 (31%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------------------ 162
            +G  G  G+ GE G+PG  G PG  G PG++GK GP                        
Sbjct: 960  QGPAGEPGQPGEPGSPGNPGAPGESGSPGEQGKEGPQGPPGLQGKEGSPGPGGLPGFPGE 1019

Query: 163  ------------KGDMGYPGPQGIPGDEGKRGP------------------------KGD 186
                        KG++G PG QG  GD+G +G                         KGD
Sbjct: 1020 RGANGLPGMPGAKGEIGPPGLQGPSGDKGAQGESGKDGESGPQGKQGPKGPPGPVGLKGD 1079

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G PG +G  GRDGLPG+ GL G PG     G+PG+DG  G  G PG  G  G +  TGP
Sbjct: 1080 RGEPGPVGPTGRDGLPGQRGLPGAPGPV---GVPGEDGDKGDIGPPGEKGFKGSQAETGP 1136

Query: 247  RGNRGKSGINGVPGTPAICAYK 268
             G  G  G+ G PG   +   K
Sbjct: 1137 PGAPGAQGLRGEPGAIGLPGEK 1158



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 98/230 (42%), Gaps = 72/230 (31%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------- 152
           +G   S  E    G +GP G+KG+IG KGE G+ G +G  G  G+ GP G +G       
Sbjct: 756 EGKRGSPGERGEKGERGPEGEKGDIGTKGEPGLSGPQGIPGLEGLEGPKGFEGPRGETGL 815

Query: 153 --IPGDEGKRGP------------KGDMGYPGPQGIPGDEGKRG---------------- 182
             +PG++GK GP            KGD G PG +G  GD+G+RG                
Sbjct: 816 VGLPGEKGKTGPPGFVGYPGNVGEKGDKGQPGREGPSGDKGERGNNGASGERGEPGPRGF 875

Query: 183 --------------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                         PKGD G PG  GL G  G PG      + G  G  G PG+ GL GK
Sbjct: 876 RGARGRRGAEGLPGPKGDTGQPGPPGLQGESGTPG------VEGPRGFVGSPGQAGLNGK 929

Query: 229 DGIPGTNGTN---------------GEKGMTGPRGNRGKSGINGVPGTPA 263
           DGIPG +G                 G  G  GP G  G+ G  G PG P 
Sbjct: 930 DGIPGPSGERGPVGDSGPPGPPGAPGVIGPQGPAGEPGQPGEPGSPGNPG 979



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 91/210 (43%), Gaps = 63/210 (30%)

Query: 111  PPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAP------------------GVVGPPG 149
            PPG++G  G KGE GA    G +G +G++GE+G P                  G+ GP G
Sbjct: 1232 PPGVEGRQGAKGESGAVGLPGLIGPEGKQGERGPPGPKGEEGKSGPPGPPGSRGINGPEG 1291

Query: 150  P---------------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
            P                     +G  G  G+ G  GD G PG  G PG EG  GP G  G
Sbjct: 1292 PKGNAGPPGFPGPPGEPGLVGPKGEAGKNGEDGKAGDPGAPGEIGPPGKEGLPGPAGKQG 1351

Query: 189  YPGRIGLDGRDGLPGE---------------------PGLDGIPGRNGMDGIPGKDGLPG 227
              G  G+ G  GLPGE                     PG  G+PG  G+ G+ G++G PG
Sbjct: 1352 SEGPAGVQGSPGLPGEKGDMGPPGAQGPPGSIGSQGLPGPSGLPGVRGLPGLAGENGPPG 1411

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G  G  G  G  G  GP+G++GK GI G
Sbjct: 1412 MSGAVGAPGKVGPVGPKGPKGDKGKRGIKG 1441



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 86/177 (48%), Gaps = 36/177 (20%)

Query: 108  EYCPPG---LQGPIGQKGE---IGAKGEMGVKGERGE---------------KGAPGVVG 146
            E  PPG   L GP G++G     G +G  G+ GE+G+               +G PG  G
Sbjct: 1334 EIGPPGKEGLPGPAGKQGSEGPAGVQGSPGLPGEKGDMGPPGAQGPPGSIGSQGLPGPSG 1393

Query: 147  PPGPQGIPGDEGKRGP---KGDMGYPG------PQGIPGDEGKRGPKGDMGYPGRIGLDG 197
             PG +G+PG  G+ GP    G +G PG      P+G  GD+GKRG KG  G  G +G+ G
Sbjct: 1394 LPGVRGLPGLAGENGPPGMSGAVGAPGKVGPVGPKGPKGDKGKRGIKGHRGELGHVGVKG 1453

Query: 198  RDGLPGEPGLD---GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              G  GE G     G+ G  G  G PG  G  G DG PG  G    +G  GP+GN G
Sbjct: 1454 EQGEKGEQGPRGALGLEGPKGNQGPPGLLGFKGNDGPPGLPGI---EGAIGPKGNAG 1507



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 90/196 (45%), Gaps = 57/196 (29%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA------------------PGVVGPPGPQGI 153
            PG  GP+G  GE G KG++G  GE+G KG+                  PG +G PG +G 
Sbjct: 1101 PGAPGPVGVPGEDGDKGDIGPPGEKGFKGSQAETGPPGAPGAQGLRGEPGAIGLPGEKGP 1160

Query: 154  PGDEGKRGPKGD---------------------------------MGYPGPQGIPGDEGK 180
            PG+ G+RGPKG+                                 +G  GP G PG++G 
Sbjct: 1161 PGEIGRRGPKGEDGPVGASGPPGPVGPQGLPGPSGLKGEVGDTGIVGPVGPAGNPGEQGP 1220

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------IPGT 234
            RGPKG  G  G  G++GR G  GE G  G+PG  G +G  G+ G PG  G       PG 
Sbjct: 1221 RGPKGSEGLQGPPGVEGRQGAKGESGAVGLPGLIGPEGKQGERGPPGPKGEEGKSGPPGP 1280

Query: 235  NGTNGEKGMTGPRGNR 250
             G+ G  G  GP+GN 
Sbjct: 1281 PGSRGINGPEGPKGNA 1296



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 15/126 (11%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L  ++G      E  PPG+ G +G  G+   +G KG  G KG+RG KG  G +G  G +G
Sbjct: 1394 LPGVRGLPGLAGENGPPGMSGAVGAPGKVGPVGPKGPKGDKGKRGIKGHRGELGHVGVKG 1453

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
              G++G++GP+G +G              GPKG+ G PG +G  G DG PG PG++G  G
Sbjct: 1454 EQGEKGEQGPRGALGL------------EGPKGNQGPPGLLGFKGNDGPPGLPGIEGAIG 1501

Query: 213  RNGMDG 218
              G  G
Sbjct: 1502 PKGNAG 1507



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 94/248 (37%), Gaps = 81/248 (32%)

Query: 108  EYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEK------------------------G 140
            E   PG++GP   +G  G+ G  G+ G+ G  GE+                        G
Sbjct: 905  ESGTPGVEGPRGFVGSPGQAGLNGKDGIPGPSGERGPVGDSGPPGPPGAPGVIGPQGPAG 964

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK-------------------- 180
             PG  G PG  G PG  G+ G  G+ G  GPQG PG +GK                    
Sbjct: 965  EPGQPGEPGSPGNPGAPGESGSPGEQGKEGPQGPPGLQGKEGSPGPGGLPGFPGERGANG 1024

Query: 181  ----------------RGPKGDMGYPGRIGLDGRD---------------GLPGEPGLDG 209
                            +GP GD G  G  G DG                 GL G+ G  G
Sbjct: 1025 LPGMPGAKGEIGPPGLQGPSGDKGAQGESGKDGESGPQGKQGPKGPPGPVGLKGDRGEPG 1084

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN---GVPGTPAICA 266
              G  G DG+PG+ GLPG  G  G  G +G+KG  GP G +G  G     G PG P    
Sbjct: 1085 PVGPTGRDGLPGQRGLPGAPGPVGVPGEDGDKGDIGPPGEKGFKGSQAETGPPGAPGAQG 1144

Query: 267  YKRESCSL 274
             + E  ++
Sbjct: 1145 LRGEPGAI 1152



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 85/225 (37%), Gaps = 66/225 (29%)

Query: 112  PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKR-------- 160
            PG +G  GQ G  G +GE G   V+G RG  G+PG  G  G  GIPG  G+R        
Sbjct: 888  PGPKGDTGQPGPPGLQGESGTPGVEGPRGFVGSPGQAGLNGKDGIPGPSGERGPVGDSGP 947

Query: 161  -------------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR--- 192
                                     G  G+ G PG  G PG++GK GP+G  G  G+   
Sbjct: 948  PGPPGAPGVIGPQGPAGEPGQPGEPGSPGNPGAPGESGSPGEQGKEGPQGPPGLQGKEGS 1007

Query: 193  ------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP-------- 232
                         G +G  G+PG  G  G PG  G  G  G  G  GKDG          
Sbjct: 1008 PGPGGLPGFPGERGANGLPGMPGAKGEIGPPGLQGPSGDKGAQGESGKDGESGPQGKQGP 1067

Query: 233  -------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                   G  G  GE G  GP G  G  G  G+PG P       E
Sbjct: 1068 KGPPGPVGLKGDRGEPGPVGPTGRDGLPGQRGLPGAPGPVGVPGE 1112



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 85/214 (39%), Gaps = 78/214 (36%)

Query: 125 GAKGEMGVKGERGEKGAPG------------------VVGPPGPQG------IPGDEGKR 160
           G  GE+G  G RGE+G PG                  + GPPG +G      +PG  G +
Sbjct: 541 GEPGEVGEPGPRGERGIPGNTGREGRRGRPGRDGERGLSGPPGMKGEQGVPGLPGLPGDK 600

Query: 161 GPKGDMGYPGPQGIPGDEGKR---------------------GPKGDMGYPGRIGLDGRD 199
           G +G +G  G QG+PG EG +                     GP+G  G PG  G+ G +
Sbjct: 601 GERGFVGATGEQGLPGHEGMQGDDGPPGLPGLPGEMGPRGFIGPRGFPGLPGNPGIPGSE 660

Query: 200 GLPGEP---------------------------------GLDGIPGRNGMDGIPGKDGLP 226
           G PG                                   GL G  G+ G+ G+ G DG P
Sbjct: 661 GPPGAKGNTGPPGPPGVPGSPGPIGPVGPPGPQGLLGPTGLVGPQGKPGIPGLSGADGSP 720

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G PG  G  GE+G  GP+G  G  G+ G+ G
Sbjct: 721 GHPGNPGVPGMKGEQGPQGPQGPIGFPGVRGMKG 754



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 88/235 (37%), Gaps = 90/235 (38%)

Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQG---IPGD---------------- 156
           GA+G MG+ G          +G+KG PG VG PGP+G   IPG+                
Sbjct: 517 GAEGPMGLTGIAGPEGPPGPQGQKGEPGEVGEPGPRGERGIPGNTGREGRRGRPGRDGER 576

Query: 157 --EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------ 208
              G  G KG+ G PG  G+PGD+G+R         G +G  G  GLPG  G+       
Sbjct: 577 GLSGPPGMKGEQGVPGLPGLPGDKGER---------GFVGATGEQGLPGHEGMQGDDGPP 627

Query: 209 ------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------------------ 238
                       G  G  G  G+PG  G+PG +G PG  G                    
Sbjct: 628 GLPGLPGEMGPRGFIGPRGFPGLPGNPGIPGSEGPPGAKGNTGPPGPPGVPGSPGPIGPV 687

Query: 239 ---------GEKGMTGPRGNRGKSGINGV------PGTPAICAYKRESCSLLPNS 278
                    G  G+ GP+G  G  G++G       PG P +   K E     P  
Sbjct: 688 GPPGPQGLLGPTGLVGPQGKPGIPGLSGADGSPGHPGNPGVPGMKGEQGPQGPQG 742


>gi|157819015|ref|NP_001100328.1| collagen alpha-1(VII) chain precursor [Rattus norvegicus]
 gi|149018489|gb|EDL77130.1| procollagen, type VII, alpha 1 (predicted) [Rattus norvegicus]
          Length = 2588

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/138 (44%), Positives = 77/138 (55%), Gaps = 11/138 (7%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDE------GKRGPKGDMGYPGPQGI 174
            + G  G  G  G +GE+GAPG+   G PGP+G PGD       G+ GP GD G PG +G 
Sbjct: 1555 DAGLPGPRGASGIKGEQGAPGLALPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPGEKGE 1614

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---DGI 231
            PG  G  GP G  G  G  G  G +G PGEPGL G  G  G+ G PG  G  G+   +G 
Sbjct: 1615 PGRPGSPGPVGPRGRDGEAGEKGDEGAPGEPGLPGKAGERGLRGAPGPRGPVGEKGNEGD 1674

Query: 232  PGTNGTNGEKGMTGPRGN 249
            PG +G NG  G +GP+G+
Sbjct: 1675 PGEDGRNGTPGPSGPKGD 1692



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 93/220 (42%), Gaps = 63/220 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER----------------------------------- 136
            PG+ GP G +G  G  GE G KGER                                   
Sbjct: 1471 PGVTGPKGDRGLTGTPGEPGEKGERGPPGPVGPQGLPGAAGRPGVEGPEGPPGPPGRRGE 1530

Query: 137  -GEKGAPG--VVGP--------------PGPQGIPGDEGKRGPKGDM--GYPGPQGIPGD 177
             GE G PG   +GP              PGP+G  G +G++G  G    G PGP+G PGD
Sbjct: 1531 KGEPGRPGDPALGPGGAGAKGEKGDAGLPGPRGASGIKGEQGAPGLALPGDPGPKGDPGD 1590

Query: 178  E------GKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGK 228
                   G+ GP GD G PG  G  GR G P   G  G DG  G  G +G PG+ GLPGK
Sbjct: 1591 RGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRGRDGEAGEKGDEGAPGEPGLPGK 1650

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G  G  G +G  G +GN G  G +G  GTP     K
Sbjct: 1651 AGERGLRGAPGPRGPVGEKGNEGDPGEDGRNGTPGPSGPK 1690



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 64/107 (59%), Gaps = 3/107 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GPIG  G  G  G+ G  GE+GE G PG  GP GP+G    +G+ G KGD G PG 
Sbjct: 1588 PGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRG---RDGEAGEKGDEGAPGE 1644

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             G+PG  G+RG +G  G  G +G  G +G PGE G +G PG +G  G
Sbjct: 1645 PGLPGKAGERGLRGAPGPRGPVGEKGNEGDPGEDGRNGTPGPSGPKG 1691



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 63/119 (52%), Gaps = 7/119 (5%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQG----I 153
            G      E   PGL+G  G  G+ G +G MG    +GERGEKG PG  G  G +G    I
Sbjct: 2457 GLPGPRGERGEPGLRGEDGHPGQEGPRGLMGPPGSRGERGEKGDPGAAGLKGDKGDSAVI 2516

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
             G  G RG KGDMG  GP+GI GD+G RG  GD G  G  G  G  G  G  G+ G+ G
Sbjct: 2517 EGPAGPRGAKGDMGERGPRGIDGDQGPRGESGDPGDKGSKGEPGDKGSAGSTGVRGLTG 2575



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 61/107 (57%), Gaps = 1/107 (0%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD 156
             ++G      +  P GL GP G +GE G KG+ G  G +G+KG   V+ GP GP+G  GD
Sbjct: 2469 GLRGEDGHPGQEGPRGLMGPPGSRGERGEKGDPGAAGLKGDKGDSAVIEGPAGPRGAKGD 2528

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             G+RGP+G  G  GP+G  GD G +G KG+ G  G  G  G  GL G
Sbjct: 2529 MGERGPRGIDGDQGPRGESGDPGDKGSKGEPGDKGSAGSTGVRGLTG 2575



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 95/251 (37%), Gaps = 93/251 (37%)

Query: 106  TKEYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
             +E  PPGL+G  G+ G  G    KG+ GV G +G+ G PG  GP G  G+PG+ G  GP
Sbjct: 2095 AREQGPPGLKGAKGEPGSDGVPGPKGDRGVPGIKGDAGEPGKRGPDGNPGLPGERGVSGP 2154

Query: 163  KGDMGYPGPQGIPGDEGK------------------RGPKGDMGYPGR------------ 192
            +G  G  GP+G PG  G                   +GP G  G PG             
Sbjct: 2155 EGKPGLQGPRGTPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPT 2214

Query: 193  --------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD--------------- 223
                          +G  G  GLPG+ G  G PG  G DG  GKD               
Sbjct: 2215 GAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGSSGKDGERGGPGVPGLPGLP 2274

Query: 224  ------GLPGKDGIPGT-------------------------NGTNGEKGMTGPRGNRGK 252
                  G PG  G PG                           G  G++G+ GPRG +G+
Sbjct: 2275 GPVGPKGEPGPVGAPGQVVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGLPGPRGEKGE 2334

Query: 253  SGINGVPGTPA 263
            +G  G PG P 
Sbjct: 2335 AGHAGEPGDPG 2345



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 66/127 (51%), Gaps = 25/127 (19%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
            G+ G+ G+ GE G             PG++G++G KGD       G+PG EG  GPKG+ 
Sbjct: 1830 GKPGLNGKNGEPGD------------PGEDGRKGEKGD------SGVPGREGPDGPKGER 1871

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G PG  GL G  GLPG+ G  G        G PG  G+ G  G  G  G+ GE+G+ G R
Sbjct: 1872 GAPGNPGLQGPPGLPGQVGPPG-------QGFPGVPGVTGPKGDRGETGSKGEQGLPGER 1924

Query: 248  GNRGKSG 254
            G RG+ G
Sbjct: 1925 GLRGEPG 1931



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 70/142 (49%), Gaps = 11/142 (7%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KG++G+ GA    G PGP+G  G+ G RG  G  G  GP+G+ G  G RG +G+ G P
Sbjct: 2446 GFKGDKGDSGA----GLPGPRGERGEPGLRGEDGHPGQEGPRGLMGPPGSRGERGEKGDP 2501

Query: 191  GRIGLDGR-------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G  GL G        +G  G  G  G  G  G  GI G  G  G+ G PG  G+ GE G 
Sbjct: 2502 GAAGLKGDKGDSAVIEGPAGPRGAKGDMGERGPRGIDGDQGPRGESGDPGDKGSKGEPGD 2561

Query: 244  TGPRGNRGKSGINGVPGTPAIC 265
             G  G+ G  G+ G     A C
Sbjct: 2562 KGSAGSTGVRGLTGPKARRARC 2583



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 97/245 (39%), Gaps = 85/245 (34%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S     P G  G  G+KG+ GA GE G+ G+ GE+G  G  GP GP G  G+EG  
Sbjct: 1616 GRPGSPGPVGPRGRDGEAGEKGDEGAPGEPGLPGKAGERGLRGAPGPRGPVGEKGNEGDP 1675

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKG-------------DMGYPGR--------------- 192
            G  G  G PGP G  GD G+ GP G             D G PG+               
Sbjct: 1676 GEDGRNGTPGPSGPKGDRGEPGPPGLPGRLVDAALESRDKGEPGQEGPRGPKGDPGPPGA 1735

Query: 193  IGLDGRDGL------------------PGEPGLDGIPGRNGMD----------------- 217
             G  G DGL                   G+ G  G+ GRNG+D                 
Sbjct: 1736 SGERGIDGLRGPPGPQGDPGVRGPAGDKGDRGSPGLDGRNGLDGKPGAPGPPGLHGASGK 1795

Query: 218  -GIPGKDGLPG---------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G PG+DGLPG                      DG PG NG NGE G  G  G +G+ G 
Sbjct: 1796 AGDPGRDGLPGLRGEHGPPGPPGPPGVPGKPGDDGKPGLNGKNGEPGDPGEDGRKGEKGD 1855

Query: 256  NGVPG 260
            +GVPG
Sbjct: 1856 SGVPG 1860



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 97/236 (41%), Gaps = 80/236 (33%)

Query: 119  GQKGEIGAKGEM--GVKGERGEKGAPG-----VVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            G+ G +GA G++  G  G +GEKGAPG     ++G PG +G  G  G RG KG+ G+ G 
Sbjct: 2281 GEPGPVGAPGQVVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGLPGPRGEKGEAGHAGE 2340

Query: 172  QGIPGDEGKRGP--------------------------KGDM------------GYPGRI 193
             G PG++G++G                           KGD+            G+PG+ 
Sbjct: 2341 PGDPGEDGQKGAPGLKGLKGEPGIGVQGPPGPSGPPGMKGDLGPPGAPGAPGIVGFPGQP 2400

Query: 194  GLDGRDGLPG---EPGLDGIPGRN--------------------------------GMDG 218
            G  G  G PG   E GL G PGR                                 G+ G
Sbjct: 2401 GPRGETGQPGPVGERGLAGPPGREGAPGPLGPPGPPGSVGAPGASGFKGDKGDSGAGLPG 2460

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
              G+ G PG  G  G  G  G +G+ GP G+RG+ G  G PG   +   K +S  +
Sbjct: 2461 PRGERGEPGLRGEDGHPGQEGPRGLMGPPGSRGERGEKGDPGAAGLKGDKGDSAVI 2516



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 81/188 (43%), Gaps = 48/188 (25%)

Query: 115  QGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPGPQGIPG--------- 155
            +G IG  GE G KGE G            GERG  G  G+ G PG  GIPG         
Sbjct: 1987 EGSIGLPGERGLKGERGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGAAG 2046

Query: 156  ---DEGKRGPKGDMGYPGPQG-----------------IPGDEGKRGPKGDMGYPGRIGL 195
                 G+RG +G+ G  G QG                 +  +E   GP  + G PG  G 
Sbjct: 2047 EAGRPGERGERGEKGERGEQGRDGHPGLPGPPGPPGPKVAIEELGPGPAREQGPPGLKGA 2106

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                   GEPG DG+PG  G  G+P   G  G PGK G  G  G  GE+G++GP G  G 
Sbjct: 2107 K------GEPGSDGVPGPKGDRGVPGIKGDAGEPGKRGPDGNPGLPGERGVSGPEGKPGL 2160

Query: 253  SGINGVPG 260
             G  G PG
Sbjct: 2161 QGPRGTPG 2168



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 82/187 (43%), Gaps = 27/187 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGE---------IGAKGEMGVKGERGEKGAPG--VVG 146
             + G    T +  PPG  G  G+ GE          G  G +G KGE G  GAPG  VVG
Sbjct: 2236 GLPGQVGETGKPGPPGRDGSSGKDGERGGPGVPGLPGLPGPVGPKGEPGPVGAPGQVVVG 2295

Query: 147  PPGP---QGIPGD-----EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            PPG    +G PGD      G+ G KGD G PGP+G  G+ G  G  GD G  G+ G  G 
Sbjct: 2296 PPGAKGEKGAPGDLAGALLGEPGAKGDRGLPGPRGEKGEAGHAGEPGDPGEDGQKGAPGL 2355

Query: 199  DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--------GIPGTNGTNGEKGMTGPRGNR 250
             GL GEPG+              K  L            G PG  G  GE G  GP G R
Sbjct: 2356 KGLKGEPGIGVQGPPGPSGPPGMKGDLGPPGAPGAPGIVGFPGQPGPRGETGQPGPVGER 2415

Query: 251  GKSGING 257
            G +G  G
Sbjct: 2416 GLAGPPG 2422



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 75/148 (50%), Gaps = 30/148 (20%)

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLD--- 208
            G  G  G PG  G+PG  G+ GP G  G P         G+ GL+G++G PG+PG D   
Sbjct: 1791 GASGKAGDPGRDGLPGLRGEHGPPGPPGPPGVPGKPGDDGKPGLNGKNGEPGDPGEDGRK 1850

Query: 209  ------GIPGRNGMD------GIPGKDGLPGKDGIPGTNGTNGEK-----GMTGPRGNRG 251
                  G+PGR G D      G PG  GL G  G+PG  G  G+      G+TGP+G+RG
Sbjct: 1851 GEKGDSGVPGREGPDGPKGERGAPGNPGLQGPPGLPGQVGPPGQGFPGVPGVTGPKGDRG 1910

Query: 252  KSGINGVPGTPAICAYKRESCSLLPNSE 279
            ++G  G  G P     + E  S LPN+E
Sbjct: 1911 ETGSKGEQGLPGERGLRGEPGS-LPNAE 1937



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 65/133 (48%), Gaps = 34/133 (25%)

Query: 127  KGEMGVKGERGEKG------------------APGVVGPPGP---QGIPGDEGKRGPKGD 165
            +GE G KGERGE+G                  A   +GP GP   QG PG +G +G  G 
Sbjct: 2054 RGERGEKGERGEQGRDGHPGLPGPPGPPGPKVAIEELGP-GPAREQGPPGLKGAKGEPGS 2112

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G PGP+G   D G  G KGD G PG+ G DG  GLPGE          G+ G  GK GL
Sbjct: 2113 DGVPGPKG---DRGVPGIKGDAGEPGKRGPDGNPGLPGE---------RGVSGPEGKPGL 2160

Query: 226  PGKDGIPGTNGTN 238
             G  G PG  G++
Sbjct: 2161 QGPRGTPGPVGSH 2173



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 73/177 (41%), Gaps = 42/177 (23%)

Query: 130  MGVKGE---RGEKGAPGVVGPPGPQGIPGDE----------------------------- 157
            +G  G+   RGE G PG VG  G  G PG E                             
Sbjct: 2394 VGFPGQPGPRGETGQPGPVGERGLAGPPGREGAPGPLGPPGPPGSVGAPGASGFKGDKGD 2453

Query: 158  ---GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG----- 209
               G  GP+G+ G PG +G  G  G+ GP+G MG PG  G  G  G PG  GL G     
Sbjct: 2454 SGAGLPGPRGERGEPGLRGEDGHPGQEGPRGLMGPPGSRGERGEKGDPGAAGLKGDKGDS 2513

Query: 210  --IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              I G  G  G  G  G  G  GI G  G  GE G  G +G++G+ G  G  G+  +
Sbjct: 2514 AVIEGPAGPRGAKGDMGERGPRGIDGDQGPRGESGDPGDKGSKGEPGDKGSAGSTGV 2570



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 84/223 (37%), Gaps = 79/223 (35%)

Query: 120  QKGEIGAKGE-----------MGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRG---- 161
            + GE G KG+            GV GE G +GAPGV GP G +G+   PG+ G++G    
Sbjct: 1438 RTGEKGEKGDCEDGGPGLPGQPGVPGEPGLRGAPGVTGPKGDRGLTGTPGEPGEKGERGP 1497

Query: 162  --------------------------------PKGDMGYPG----------------PQG 173
                                             KG+ G PG                  G
Sbjct: 1498 PGPVGPQGLPGAAGRPGVEGPEGPPGPPGRRGEKGEPGRPGDPALGPGGAGAKGEKGDAG 1557

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            +PG  G  G KG+ G PG         LPG+PG  G PG  G  G+ G+ G  G  G PG
Sbjct: 1558 LPGPRGASGIKGEQGAPGLA-------LPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPG 1610

Query: 234  TNGTNGEKGMTGPRGNRGK------SGINGVPGTPAICAYKRE 270
              G  G  G  GP G RG+       G  G PG P +     E
Sbjct: 1611 EKGEPGRPGSPGPVGPRGRDGEAGEKGDEGAPGEPGLPGKAGE 1653



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 63/139 (45%), Gaps = 28/139 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------------GYPGPQGI 174
            +G  G+ G+ GE G PG   PPG  G  G +G+RG  G              G PGP G 
Sbjct: 2232 QGSPGLPGQVGETGKPG---PPGRDGSSGKDGERGGPGVPGLPGLPGPVGPKGEPGPVGA 2288

Query: 175  PGD--EGKRGPKGDMGYPGRI--------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            PG    G  G KG+ G PG +        G  G  GLPG  G  G  G  G  G PG+D 
Sbjct: 2289 PGQVVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGLPGPRGEKGEAGHAGEPGDPGED- 2347

Query: 225  LPGKDGIPGTNGTNGEKGM 243
              G+ G PG  G  GE G+
Sbjct: 2348 --GQKGAPGLKGLKGEPGI 2364



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 94/238 (39%), Gaps = 92/238 (38%)

Query: 112  PGLQGPI-------GQKGEIG---------------AKGEMGV----------------- 132
            PGL G +         KGE G               A GE G+                 
Sbjct: 1699 PGLPGRLVDAALESRDKGEPGQEGPRGPKGDPGPPGASGERGIDGLRGPPGPQGDPGVRG 1758

Query: 133  -KGERGEKGAPGV------------------------VGPPGPQGIPG------------ 155
              G++G++G+PG+                         G PG  G+PG            
Sbjct: 1759 PAGDKGDRGSPGLDGRNGLDGKPGAPGPPGLHGASGKAGDPGRDGLPGLRGEHGPPGPPG 1818

Query: 156  ---------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---GRDGLPG 203
                     D+GK G  G  G P   G PG++G++G KGD G PGR G D   G  G PG
Sbjct: 1819 PPGVPGKPGDDGKPGLNGKNGEP---GDPGEDGRKGEKGDSGVPGREGPDGPKGERGAPG 1875

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PGL G PG  G  G PG+ G PG  G+ G  G  GE G  G +G  G+ G+ G PG+
Sbjct: 1876 NPGLQGPPGLPGQVGPPGQ-GFPGVPGVTGPKGDRGETGSKGEQGLPGERGLRGEPGS 1932



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 42/111 (37%)

Query: 136  RGEKGAPGVV------------------GPPGPQGIPGD---EGKR-------------- 160
            +G+KG PGV                   G PGPQG PG    +G+R              
Sbjct: 1254 KGQKGEPGVTGPQGQAGPPGPPGLPGRTGAPGPQGAPGSTQAKGERGFPGPEGPPGSPGL 1313

Query: 161  -------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                   G KG  G+ GP+G  G+ G +GPKG+ G PG++   GR GLPG+
Sbjct: 1314 PGVPGSPGVKGSPGWSGPRGDRGERGPQGPKGEPGEPGQVIGGGRPGLPGK 1364



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 37/79 (46%), Gaps = 25/79 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGY 168
            PGLQGP                      G PG VGPPG QG PG  G  GPKGD    G 
Sbjct: 1877 PGLQGP---------------------PGLPGQVGPPG-QGFPGVPGVTGPKGDRGETGS 1914

Query: 169  PGPQGIPGDEGKRGPKGDM 187
             G QG+PG+ G RG  G +
Sbjct: 1915 KGEQGLPGERGLRGEPGSL 1933


>gi|326923363|ref|XP_003207906.1| PREDICTED: collagen alpha-1(IV) chain-like [Meleagris gallopavo]
          Length = 1670

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/163 (43%), Positives = 88/163 (53%), Gaps = 16/163 (9%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
            QKG +G   EMG+ G  GEKG PG+ G PG  G PG +G++G KG  G+PG  G PG  G
Sbjct: 1010 QKGSVG---EMGLPGTPGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPG-IGFPGSPG 1065

Query: 180  KRGPKGDMGYPG---------RIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPG 227
            ++G  G +G PG           G+ G  G PG    PG+ G PG  G+ G  G+ GLPG
Sbjct: 1066 EKGEPGRIGSPGLSGDKGEKGNAGIPGMPGSPGPKGSPGMAGFPGNPGLHGAKGEKGLPG 1125

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
              GIPG  G  GE G+ GP G+ G+ G  G  G P     K E
Sbjct: 1126 LSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGTAGAKGE 1168



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 89/177 (50%), Gaps = 40/177 (22%)

Query: 113 GLQGPIGQKGEIG---------------------AKGEMGVKGERGEKGAPGVVGPPGPQ 151
           G QGP G+KGE G                      KGE G  GE+GE+G PG+ G     
Sbjct: 214 GFQGPKGEKGEQGIQGPPGPPGPTPHMKEKGSEIIKGEKGEPGEKGEQGVPGLPG----- 268

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                 G RG KG+ G PGP+G PG +G+ GPKG+ G PG  G+ GR   PGEPG  G  
Sbjct: 269 -----SGYRGEKGEPGKPGPRGKPGKDGEPGPKGEPGLPGGFGVPGR---PGEPGAKGEK 320

Query: 212 GRNGMDGIPGK--DGLP----GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           G  G  G PG+  D  P    G+ G PG +G  G KG  G +G  G  GI G+PG P
Sbjct: 321 GDQGPQGPPGRIIDAGPIDTFGEKGDPGVSGLPGLKGQKGEKGFPGAQGIPGIPGRP 377



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 92/188 (48%), Gaps = 13/188 (6%)

Query: 112  PGLQGPIGQKGEIGAKG--EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            PG  G  G+KG+ GA G   +G  G  GEKG PG +G PG  G  G++G  G  G  G P
Sbjct: 1038 PGFPGQKGEKGDKGAAGFPGIGFPGSPGEKGEPGRIGSPGLSGDKGEKGNAGIPGMPGSP 1097

Query: 170  GPQG------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            GP+G       PG+ G  G KG+ G PG  G+ G  G PGEPG+ G  G  G  G PG D
Sbjct: 1098 GPKGSPGMAGFPGNPGLHGAKGEKGLPGLSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYD 1157

Query: 224  GLPGKDGIPGTNGTNGEK-----GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
            G+PG  G  G  G  G+      G  G +G +G+ G  G PG P I   K E     P  
Sbjct: 1158 GIPGTAGAKGEQGAPGKGFPGFPGAKGDKGAKGEVGFPGSPGIPGIPGLKGEQGYAGPPG 1217

Query: 279  ETSQLLIP 286
                  +P
Sbjct: 1218 PKGNQGLP 1225



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/192 (40%), Positives = 98/192 (51%), Gaps = 42/192 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGY 168
            PG QG +G KG  GAKGEMGV G       PG+ G PGP   +G+PG++G +G KG +  
Sbjct: 864  PGPQGSVGLKGSAGAKGEMGVMG------TPGLPGTPGPIGDRGLPGEKGSQGLKGVV-- 915

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             GPQG PG +G +G  G  G PG       + L G+ G PGE G  G+PG  G+ G  G+
Sbjct: 916  -GPQGDPGVKGDKGEAGLPGEPGSMDTMDMVSLKGQKGDPGEKGDLGLPGEKGLRGEYGE 974

Query: 223  DGLPGKDGIPGT------------------------NGTNGEKGMTGPRGNRGKSGINGV 258
             G+PG+DG PGT                         G+ GE G+ G  G +G  GI G 
Sbjct: 975  PGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPGTPGEKGLPGIPGS 1034

Query: 259  PGTPAICAYKRE 270
            PGTP     K E
Sbjct: 1035 PGTPGFPGQKGE 1046



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 88/170 (51%), Gaps = 20/170 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
            PG  G  G+ G IG+ G  G KGE+G  G PG+ G PGP+G       PG+ G  G KG+
Sbjct: 1061 PGSPGEKGEPGRIGSPGLSGDKGEKGNAGIPGMPGSPGPKGSPGMAGFPGNPGLHGAKGE 1120

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEP-----------GLDGIP 211
             G PG  GIPG +G+ G  G  G  G IG  G    DG+PG             G  G P
Sbjct: 1121 KGLPGLSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGTAGAKGEQGAPGKGFPGFP 1180

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G  G+ G PG  GIPG  G  GE+G  GP G +G  G+ G+PG+
Sbjct: 1181 GAKGDKGAKGEVGFPGSPGIPGIPGLKGEQGYAGPPGPKGNQGLPGLPGS 1230



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 96/209 (45%), Gaps = 58/209 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD--------------- 156
            PG  GPIG +G  G KG  G+KG  G +G PGV G  G  G+PG+               
Sbjct: 891  PGTPGPIGDRGLPGEKGSQGLKGVVGPQGDPGVKGDKGEAGLPGEPGSMDTMDMVSLKGQ 950

Query: 157  EGKRGPKGDMGYPGPQGI---------------PGDEGKRGPKGD--------------- 186
            +G  G KGD+G PG +G+               PG  G+ GPKGD               
Sbjct: 951  KGDPGEKGDLGLPGEKGLRGEYGEPGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGIPGQ 1010

Query: 187  ------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                  MG PG  G  G  G+PG PG  G PG+ G  G  G  G PG  G PG+ G  GE
Sbjct: 1011 KGSVGEMGLPGTPGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPG-IGFPGSPGEKGE 1069

Query: 241  ------KGMTGPRGNRGKSGINGVPGTPA 263
                   G++G +G +G +GI G+PG+P 
Sbjct: 1070 PGRIGSPGLSGDKGEKGNAGIPGMPGSPG 1098



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 87/186 (46%), Gaps = 47/186 (25%)

Query: 119  GQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM--------- 166
            GQKG+ G KG++G+ GE   RGE G PG+   PG  G PG  G+ GPKGD          
Sbjct: 949  GQKGDPGEKGDLGLPGEKGLRGEYGEPGI---PGRDGEPGTPGQPGPKGDQGPPGYPGDP 1005

Query: 167  ------------------------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIG 194
                                    G PG  G PG  G++G KGD        +G+PG  G
Sbjct: 1006 GIPGQKGSVGEMGLPGTPGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPGIGFPGSPG 1065

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              G  G  G PGL G  G  G  GIPG  G PG  G PG  G  G  G+ G +G +G  G
Sbjct: 1066 EKGEPGRIGSPGLSGDKGEKGNAGIPGMPGSPGPKGSPGMAGFPGNPGLHGAKGEKGLPG 1125

Query: 255  INGVPG 260
            ++G+PG
Sbjct: 1126 LSGIPG 1131



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 78/149 (52%), Gaps = 27/149 (18%)

Query: 119 GQKGEIGAKGEMGV--------KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           G+KGE G KGE GV        +GE+GE G PG  G PG  G PG +G+ G  G  G PG
Sbjct: 250 GEKGEPGEKGEQGVPGLPGSGYRGEKGEPGKPGPRGKPGKDGEPGPKGEPGLPGGFGVPG 309

Query: 171 PQGIPGDEGKRGPKGDMGYPGRI---------------GLDGRDGLPGEPGLDGIPGRNG 215
             G PG +G++G +G  G PGRI               G+ G  GL G+ G  G PG  G
Sbjct: 310 RPGEPGAKGEKGDQGPQGPPGRIIDAGPIDTFGEKGDPGVSGLPGLKGQKGEKGFPGAQG 369

Query: 216 MDGIPGKDGLP---GKDGIPGTNGTNGEK 241
           + GIPG+  +P   G  G+PG  G  GEK
Sbjct: 370 IPGIPGRP-VPDMVGSPGVPGQRGEKGEK 397



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 95/216 (43%), Gaps = 55/216 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
           PGL G  G  G  G  G  G++G++GE G    VG PGP+G+PG  G  G  G+ G P  
Sbjct: 708 PGLPGTPGTPGLDGFPGTPGLQGQKGEPG----VGLPGPKGLPGIPGPAGIPGEKGNPGL 763

Query: 170 ----GPQGIPGDEGKRGPKGDMGYPGRIGL------------------------------ 195
               G QG PG  G++G +GD G PG  GL                              
Sbjct: 764 PGLRGEQGFPGVPGQQGFRGDPGLPGLQGLPGPQGSPGVGPPGLPGPAGQPGPEGPPGFP 823

Query: 196 --DGRDGLPGEPGLD-----GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
              G  G PG PGLD     G  G  G  G+PG  GLP   G+PG  G+ G KG  G +G
Sbjct: 824 GIKGERGFPGIPGLDRPGPKGDKGSQGQPGVPGSVGLP---GLPGPQGSVGLKGSAGAKG 880

Query: 249 NRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLL 284
             G  G  G+PGTP     +      LP  + SQ L
Sbjct: 881 EMGVMGTPGLPGTPGPIGDRG-----LPGEKGSQGL 911



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 93/195 (47%), Gaps = 45/195 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
           PG+ GP G  GE   KG  G+ G RGE+G PGV   PG QG  GD G  G          
Sbjct: 746 PGIPGPAGIPGE---KGNPGLPGLRGEQGFPGV---PGQQGFRGDPGLPGLQGLPGPQGS 799

Query: 163 --------------------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                                     KG+ G+PG   IPG + + GPKGD G  G+ G+ 
Sbjct: 800 PGVGPPGLPGPAGQPGPEGPPGFPGIKGERGFPG---IPGLD-RPGPKGDKGSQGQPGVP 855

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  GLPG PG  G  G  G  G  G+ G+ G  G+PGT G  G++G+ G +G++G  G+ 
Sbjct: 856 GSVGLPGLPGPQGSVGLKGSAGAKGEMGVMGTPGLPGTPGPIGDRGLPGEKGSQGLKGVV 915

Query: 257 GVPGTPAICAYKRES 271
           G  G P +   K E+
Sbjct: 916 GPQGDPGVKGDKGEA 930



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 89/215 (41%), Gaps = 73/215 (33%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------GDM 166
           G+KG+ G  G+ G+ G  G  G  G+ GP GP+G  G  G +G +            G+ 
Sbjct: 542 GEKGDPGFPGQPGIPGREGTPGKDGLPGPQGPKGASGTAGLKGERGPPGQPGFPGVRGER 601

Query: 167 GYPGPQGI-----PGDEGKRGPKGDMGYPGRIGLDGRDG----LPGEPGLD--------- 208
           G PGP GI     PGD+G RG  G  G PG  G  G  G    LPG PG D         
Sbjct: 602 GLPGPPGIGTAGLPGDKGDRGFAGTPGLPGLPGAKGEAGRTVPLPGPPGADGLPGPPGFP 661

Query: 209 ---------GIPGRNGMDG-----------------------------IPGKDGLPGKDG 230
                    G+PGR G+ G                             +PG  G PG DG
Sbjct: 662 GPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFPGQPGSPGLPGTPGTPGLDG 721

Query: 231 IPGTNGTNGEK-----GMTGPRGNRGKSGINGVPG 260
            PGT G  G+K     G+ GP+G  G  G  G+PG
Sbjct: 722 FPGTPGLQGQKGEPGVGLPGPKGLPGIPGPAGIPG 756



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/114 (44%), Positives = 59/114 (51%), Gaps = 13/114 (11%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L  + G      E   PG  G IGQKGE G     G  G KGE+   GAPG   P    G
Sbjct: 1126 LSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGTAGAKGEQ---GAPGKGFP----G 1178

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             PG +G +G KG++G+PG  GIPG  G    KG+ GY G  G  G  GLPG PG
Sbjct: 1179 FPGAKGDKGAKGEVGFPGSPGIPGIPGL---KGEQGYAGPPGPKGNQGLPGLPG 1229



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 18/126 (14%)

Query: 166 MGYPGPQGIPGD----EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           +G PG +G PGD       +G KGD G+PG+ G+ GR+G PG+   DG+PG  G  G  G
Sbjct: 522 IGRPGAKGEPGDFTYDSILKGEKGDPGFPGQPGIPGREGTPGK---DGLPGPQGPKGASG 578

Query: 222 KDGLPGK---DGIPGTNGTNGEKGMTGP--------RGNRGKSGINGVPGTPAICAYKRE 270
             GL G+    G PG  G  GE+G+ GP         G++G  G  G PG P +   K E
Sbjct: 579 TAGLKGERGPPGQPGFPGVRGERGLPGPPGIGTAGLPGDKGDRGFAGTPGLPGLPGAKGE 638

Query: 271 SCSLLP 276
           +   +P
Sbjct: 639 AGRTVP 644


>gi|327260888|ref|XP_003215265.1| PREDICTED: collagen alpha-1(VI) chain-like [Anolis carolinensis]
          Length = 1026

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 84/181 (46%), Gaps = 45/181 (24%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGP---------QGIPGDEGKRGPKGDMGYPGPQGIP 175
           G +G+ G+ G +G+ G PG  G PGP         +G  GD+G RG KG  G  G +GI 
Sbjct: 279 GERGKPGLPGIKGDAGEPGNQGDPGPVGYQGMKGDKGDRGDKGSRGSKGSKGEKGKRGID 338

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------LDGIPGRNGMD 217
           G +GK+G +G  G PG  G  G DGL G PG                  +DG PGR G  
Sbjct: 339 GIDGKKGEQGFHGLPGCKGSPGFDGLQGPPGSKGDPGPYGPKGGKGEPGVDGRPGRRGNT 398

Query: 218 GIPGK------------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G PG+                  +G  G DG  G  G+NGE+G  G  GNRG  G  G P
Sbjct: 399 GNPGEKGPPGSPGAPGKKGEIGDEGNLGPDGTSGEKGSNGERGAPGTPGNRGTRGGKGDP 458

Query: 260 G 260
           G
Sbjct: 459 G 459



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 80/159 (50%), Gaps = 34/159 (21%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG--- 176
           +KGEIG +G +G  G  GEKG+ G  G P   G PG+ G RG KGD   PGPQG  G   
Sbjct: 415 KKGEIGDEGNLGPDGTSGEKGSNGERGAP---GTPGNRGTRGGKGD---PGPQGEQGREG 468

Query: 177 ------DEGKRGPKGDMGYPGRIG---------------LDGRDGLPGEPGLDGIPGRNG 215
                 + G+ GP G  GY G  G               L G  G  G+ G DG PG NG
Sbjct: 469 PYGPPGEPGEAGPPGPKGYRGDEGPSGPEGPKGLPGPPGLPGDTGPMGDRGEDGPPG-NG 527

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            DG PG  G PG  G PG NGT   KG  GP+G+ G+ G
Sbjct: 528 TDGFPGVPGYPGSRGDPGVNGT---KGHPGPKGDEGEIG 563



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 76/169 (44%), Gaps = 41/169 (24%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG---------- 164
           +G IG +G +G  G  G KG  GE+GAPG  G  G +G  GD G +G +G          
Sbjct: 416 KGEIGDEGNLGPDGTSGEKGSNGERGAPGTPGNRGTRGGKGDPGPQGEQGREGPYGPPGE 475

Query: 165 --DMGYPGPQGIPGDEG---------------------KRGPKGDMGYPGRIGLDGRDGL 201
             + G PGP+G  GDEG                       G +G+ G PG  G DG  G+
Sbjct: 476 PGEAGPPGPKGYRGDEGPSGPEGPKGLPGPPGLPGDTGPMGDRGEDGPPGN-GTDGFPGV 534

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG-------TNGTNGEKGM 243
           PG PG  G PG NG  G PG  G  G+ G PG       T G  G KG 
Sbjct: 535 PGYPGSRGDPGVNGTKGHPGPKGDEGEIGDPGRESNATGTVGMKGAKGY 583



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 72/181 (39%), Gaps = 57/181 (31%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QG  G KG+ G KG  G KG +GEKG  G+ G  G +G  G  G  G KG  G+ G
Sbjct: 304 PVGYQGMKGDKGDRGDKGSRGSKGSKGEKGKRGIDGIDGKKGEQGFHGLPGCKGSPGFDG 363

Query: 171 PQGIPGDE---------------------GKRG------------------PKGDMGYPG 191
            QG PG +                     G+RG                   KG++G  G
Sbjct: 364 LQGPPGSKGDPGPYGPKGGKGEPGVDGRPGRRGNTGNPGEKGPPGSPGAPGKKGEIGDEG 423

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            +G DG  G  G  G  G P                  G PG  GT G KG  GP+G +G
Sbjct: 424 NLGPDGTSGEKGSNGERGAP------------------GTPGNRGTRGGKGDPGPQGEQG 465

Query: 252 K 252
           +
Sbjct: 466 R 466



 Score = 42.7 bits (99), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 33/68 (48%)

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE G  G+PG  G  G PG  G PG  G  G  G  G++G  G RG++G  G  G  G  
Sbjct: 279 GERGKPGLPGIKGDAGEPGNQGDPGPVGYQGMKGDKGDRGDKGSRGSKGSKGEKGKRGID 338

Query: 263 AICAYKRE 270
            I   K E
Sbjct: 339 GIDGKKGE 346


>gi|296190644|ref|XP_002743286.1| PREDICTED: collagen alpha-1(XXVII) chain, partial [Callithrix
           jacchus]
          Length = 1234

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 89/165 (53%), Gaps = 27/165 (16%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYPGPQGI 174
           K   GAKG+MG+ G  G  G PG  G    PGP G PG++G+ GP+G     GYPG QG+
Sbjct: 681 KAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGL 740

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PG  G  GPKG  GY   IGL G  GLP   GE GL G+PG+ G  G+PG  G+ G+ G 
Sbjct: 741 PGPVGDPGPKGSRGY---IGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGIFGERGP 797

Query: 232 PGTNGTNGEK---------------GMTGPRGNRGKSGINGVPGT 261
           PG +G  GE                G+ GP G  G  G+ G+ G+
Sbjct: 798 PGLDGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGS 842



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 699 PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGL 758

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN----------- 214
           PG  G+PG +G+RG  G  G  G++G+ G  G+ GE   PGLDG PG             
Sbjct: 759 PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGIFGERGPPGLDGNPGELGLPGPPGVPGL 818

Query: 215 -GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G PG  G+ G  G+ GE G+ G +G +G  G++G PG
Sbjct: 819 IGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 865



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 76/144 (52%), Gaps = 12/144 (8%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++G
Sbjct: 671 QKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQG 721

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 722 QPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 781

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G RG  G++G PG
Sbjct: 782 KMGMPGFPGIFGERGPPGLDGNPG 805



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 90/189 (47%), Gaps = 44/189 (23%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KG +G+ GE G+KG++GE+G PGV       G PG +G +G +G  G+PG +
Sbjct: 829  GYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGV------SGDPGFQGDKGSQGLPGFPGAR 882

Query: 173  GIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-- 215
            G PG  GK G KG               D+G PG  G +G      +PG  G+PG  G  
Sbjct: 883  GKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGM-----KPGARGLPGPRGQL 937

Query: 216  ----------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                            ++G PG+ G PG+ G+ G  G  G+ G  GP G +G  G  G  
Sbjct: 938  GPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGLMGFIGRV 997

Query: 260  GTPAICAYK 268
            G P I   K
Sbjct: 998  GEPGIVGEK 1006



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 81/194 (41%), Gaps = 55/194 (28%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPK--------- 163
           GP G +G IG  G  G+ G  GE+G PGV G  G  G+PG     G+RGP          
Sbjct: 748 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGIFGERGPPGLDGNPGEL 807

Query: 164 ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                       GD+G  GP G PG +G +G  G +G PG  G  G  G+P   G+PG  
Sbjct: 808 GLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQ 867

Query: 209 GIPGRNGMDGIPGKDGLPGK------------------------DGIPGTNGTNGEK--- 241
           G  G  G+ G PG  G PG                          G PG NG  G K   
Sbjct: 868 GDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKPGA 927

Query: 242 -GMTGPRGNRGKSG 254
            G+ GPRG  G  G
Sbjct: 928 RGLPGPRGQLGPEG 941



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 74/169 (43%), Gaps = 48/169 (28%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG----------------- 158
            GP G  G  G +G  G+KG  G +G PG    PG QG+ G+ G                 
Sbjct: 1061 GPRGPDGPAGEQGSRGLKGSPGPQGRPGQ---PGQQGVAGERGHLGSRGFPGIPGPSGPP 1117

Query: 159  ----------------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                                  + GPKG  G  G  G+PG+ G +G  G +G PG  GL 
Sbjct: 1118 GTKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEPGLPGEAGMKGDLGPLGTPGEQGLI 1177

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G+ G   EPGL+G  G  G DG+ G  G PG D   G +G  G++G+ G
Sbjct: 1178 GQRG---EPGLEGDSGPMGPDGLKGDRGDPGPD---GEHGEKGQEGLMG 1220



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 71/174 (40%), Gaps = 60/174 (34%)

Query: 144 VVGPPGPQG------------------------------------------IPGDEG--- 158
           ++GPPGP+G                                            GD G   
Sbjct: 620 LMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSP 679

Query: 159 ---KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPG 212
                G KGDMG PG  G PG  G+   KG  GYPG  G  G  G P   G PG  G PG
Sbjct: 680 GKAHDGAKGDMGLPGLSGNPGPPGR---KGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPG 736

Query: 213 RNGMDGI---PGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           R G+ G    PG  G  G  G+P   G  G++GE+G+ G  G RGK G+ G PG
Sbjct: 737 RQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPG 790



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 74/164 (45%), Gaps = 43/164 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------ 159
            PG QG                KG +G  G PG  G PGP G  GD+G             
Sbjct: 864  PGFQGD---------------KGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGF 908

Query: 160  ---RGPKGDMG----YPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRDGLPGEPG 206
                GP GD G     PG +G+PG  G+ GP+GD G  G        G  GR G PG PG
Sbjct: 909  PGDIGPPGDNGPEGMKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPG 968

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            LDG+    G  G PG+ G  G+ G+ G  G  GE G+ G +G+R
Sbjct: 969  LDGV---KGEPGDPGRPGPVGEQGLMGFIGRVGEPGIVGEKGDR 1009



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 65/148 (43%), Gaps = 42/148 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER----------------------------------- 136
            PG QG  GQ G+ G  GE G  G R                                   
Sbjct: 1081 PGPQGRPGQPGQQGVAGERGHLGSRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPIGPPGE 1140

Query: 137  -GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
             G KG PG VG P   G+PG+ G +G  G +G PG QG+ G  G+ G +GD G    +G 
Sbjct: 1141 MGPKGPPGAVGEP---GLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGP---MGP 1194

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            DG  G  G+PG DG  G  G +G+ G+D
Sbjct: 1195 DGLKGDRGDPGPDGEHGEKGQEGLMGED 1222



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 70/161 (43%), Gaps = 48/161 (29%)

Query: 139  KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------ 192
            +GA G  GP GP G  G++G RG KG    PGPQG PG  G++G  G+ G+ G       
Sbjct: 1054 RGAKGRWGPRGPDGPAGEQGSRGLKGS---PGPQGRPGQPGQQGVAGERGHLGSRGFPGI 1110

Query: 193  ------------------------------IGLDGRDGLPGEPGLDGIPGRNGMD----- 217
                                          +G  G  G  GEPGL   PG  GM      
Sbjct: 1111 PGPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEPGL---PGEAGMKGDLGP 1167

Query: 218  -GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G PG+ GL G+ G PG  G +G  G  G +G+RG  G +G
Sbjct: 1168 LGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDG 1208



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 96/266 (36%), Gaps = 106/266 (39%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------- 144
             M+G   S  E   PGL+G  G++G  G  G+ G +G++G +G PG              
Sbjct: 835  GMKGLMGSVGE---PGLKGDKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPGPLGKV 891

Query: 145  --------------------VGPPG----------PQGIPGDEGKRGPKGDM-------- 166
                                +GPPG           +G+PG  G+ GP+GD         
Sbjct: 892  GDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKPGARGLPGPRGQLGPEGDEGPMGPPGA 951

Query: 167  ----GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGLDGIPG---- 212
                G PG +G PG  G  G KG+ G PGR G  G  GL       GEPG+ G  G    
Sbjct: 952  PGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGLMGFIGRVGEPGIVGEKGDRGM 1011

Query: 213  --------------------------------------RNGMDGIPGKDGLPGKDGIPGT 234
                                                    GM G  G+ G  G DG  G 
Sbjct: 1012 MGPPGAPGPKGSMGHPGMPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRWGPRGPDGPAGE 1071

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G KG  GP+G  G+ G  GV G
Sbjct: 1072 QGSRGLKGSPGPQGRPGQPGQQGVAG 1097


>gi|449269067|gb|EMC79876.1| Collagen alpha-1(V) chain, partial [Columba livia]
          Length = 1813

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 78/148 (52%), Gaps = 15/148 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G         D G +G +G++G PGP+G  G E
Sbjct: 767 GVKGADGVRGLKGTKGEKGEDGFPGFKG---------DMGIKGDRGEIGPPGPRGEDGPE 817

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIP 232
           G +G  G  G PG +G  G  G  G PGL G PGR       G  G PG +G  G  G P
Sbjct: 818 GPKGRSGPNGDPGPLGPAGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGTRGTP 877

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G++G TGPRG RG  G  G PG
Sbjct: 878 GKPGPRGQRGPTGPRGERGPRGSTGKPG 905



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 61/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1378 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 1434

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1435 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGPKGEQGI 1494



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 79/180 (43%), Gaps = 63/180 (35%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQG---------------IPGDEGKRGPKGDMGY----- 168
           E G +G+ GE G  G+ G PGP+G               + G +G+ GPKG++G      
Sbjct: 633 EDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVAGMDGQTGPKGNVGPQGEPG 692

Query: 169 -------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                  PG QG+PG +G  GP G+ G  G+            PGL G+PG +G  G PG
Sbjct: 693 PPGQQGNPGAQGLPGPQGAIGPPGEKGPLGK------------PGLPGMPGADGPPGHPG 740

Query: 222 KDGLPGK------------------------DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           K+G PG+                        DG+ G  GT GEKG  G  G +G  GI G
Sbjct: 741 KEGPPGEKGSQGPPGPQGPIGYPGPRGVKGADGVRGLKGTKGEKGEDGFPGFKGDMGIKG 800



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 12/106 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G+ G  G  G +G  GE+G+ G P         G+PG  G++GPKG +G+P   
Sbjct: 815 GPEGPKGRSGPNGDPGPLGPAGEKGKLGVP---------GLPGYPGRQGPKGSIGFP--- 862

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           G PG  G++G +G  G PG  G  G  G  GE G  G  G+ G  G
Sbjct: 863 GFPGANGEKGTRGTPGKPGPRGQRGPTGPRGERGPRGSTGKPGPKG 908



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 850 PGRQGP---KGSIGFPGFPGANGEKGTRGTPGKPGPRGQRGPTGPRGERGPRGSTGKPGP 906

Query: 172 QG 173
           +G
Sbjct: 907 KG 908



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG                   
Sbjct: 1378 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1437

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                     +G  GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1438 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGPKG 1490



 Score = 39.7 bits (91), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            G+ G  G PG  GLPGKDG PG  G  GE+G+ GP G  G
Sbjct: 1007 GKEGTKGDPGPAGLPGKDGPPGLRGFPGERGLPGPIGATG 1046


>gi|402867399|ref|XP_003897840.1| PREDICTED: collagen alpha-1(IX) chain isoform 2 [Papio anubis]
          Length = 678

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/195 (43%), Positives = 108/195 (55%), Gaps = 36/195 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKG---------ERGEKG 140
           L  M+G   +  E   PG QG  G++G      E+GA+G  G +G         ++GEKG
Sbjct: 182 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 241

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+RGP G+ G   P+G  G +G RG      PKGD G PG
Sbjct: 242 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAG---PKGERGAQGARGIPGLPGPKGDTGLPG 298

Query: 192 RIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              +DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  G
Sbjct: 299 ---VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 246 PRGNRGKSGINGVPG 260
           P GN GK G  G PG
Sbjct: 356 PMGNSGKPGQQGPPG 370



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 99/174 (56%), Gaps = 21/174 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 183 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 242

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQG+PG   D+G+RGP G+ G  G  G  G  G+PG      +PG  G  G+
Sbjct: 243 RGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPG------LPGPKGDTGL 296

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG DG   +DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  S
Sbjct: 297 PGVDG---RDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGS 347



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 234

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G RG  G  G+PG P 
Sbjct: 235 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPG 289



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PGP G  G  G++GP G++G  GP+
Sbjct: 325 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGPMGNSGKPGQQGPPGEVGPRGPR 378

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PGR
Sbjct: 379 GLPGSRGELGPVGSPGLPGR 398



 Score = 42.7 bits (99), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G+   MG  G+ G++G PG VGP GP+G+PG  G+ GP G  G 
Sbjct: 336 PGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGL 395

Query: 169 PG 170
           PG
Sbjct: 396 PG 397



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 65/145 (44%), Gaps = 39/145 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE------------------- 138
            + G      +  PPG  GP G++G  GA+G  G+ G +G+                   
Sbjct: 253 GLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 312

Query: 139 --------------KGAPGVVGPPGPQGIPGDEG------KRGPKGDMGYPGPQGIPGDE 178
                         +G PGV G PG +G+ G++G      K GP G+ G PG QG PG+ 
Sbjct: 313 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEV 372

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPG 203
           G RGP+G  G  G +G  G  GLPG
Sbjct: 373 GPRGPRGLPGSRGELGPVGSPGLPG 397


>gi|348522008|ref|XP_003448518.1| PREDICTED: collagen alpha-1(XI) chain-like [Oreochromis niloticus]
          Length = 1815

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 88/176 (50%), Gaps = 18/176 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQ G+ G  GEMG +G  G +G+PG   P G +G+PG +G+ GPKG+MG  G  G PG +
Sbjct: 644 GQVGQRGVAGEMGPRGLLGPRGSPG---PAGQRGLPGLDGQPGPKGNMGPQGEAGPPGQQ 700

Query: 179 GKRGP---------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  GP               KG  G  G  GL G DG PG PG +G PG  G  G PG  
Sbjct: 701 GMPGPNGLIGPQGPIGPPGEKGPQGKQGLHGLAGADGPPGHPGKEGPPGEKGAAGHPGPM 760

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
           G  G  G  G  G  G +G+ G +G +G+ G  G  G   +   K E+  L P  E
Sbjct: 761 GSIGYPGPRGVKGAEGIRGLKGDKGEKGEDGFPGFKGDMGLKGDKGENGVLGPRGE 816



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 86/181 (47%), Gaps = 18/181 (9%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKG------------EIGAKGEMGVKGERGEKGAPGVVGP 147
           +G      E  PPG QG  G  G            E G +G+ G+ G  G  G PG  G 
Sbjct: 685 KGNMGPQGEAGPPGQQGMPGPNGLIGPQGPIGPPGEKGPQGKQGLHGLAGADGPPGHPGK 744

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            GP G  G  G  GP G +GYPGP+G+ G EG RG KGD G        G DG PG  G 
Sbjct: 745 EGPPGEKGAAGHPGPMGSIGYPGPRGVKGAEGIRGLKGDKGE------KGEDGFPGFKGD 798

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G+ G  G +G+ G  G  G +G  G +G  GE G  G  G +GK G+ G+PG P     
Sbjct: 799 MGLKGDKGENGVLGPRGEDGPEGPKGKSGPTGESGPMGSAGEKGKLGVPGLPGYPGRQGS 858

Query: 268 K 268
           K
Sbjct: 859 K 859



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 84/163 (51%), Gaps = 18/163 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G KG  G +G  G KGE+GE G PG  G  G +G  G+ G  GP+G+ G  GP+
Sbjct: 764 GYPGPRGVKGAEGIRGLKGDKGEKGEDGFPGFKGDMGLKGDKGENGVLGPRGEDGPEGPK 823

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G  G+ GP G  G  G++G+    GLPG PG  G  G NG  G PG +G  G  GI 
Sbjct: 824 GKSGPTGESGPMGSAGEKGKLGV---PGLPGYPGRQGSKGSNGFPGFPGANGEKGARGIA 880

Query: 233 GTNGTNGEKGMT---------------GPRGNRGKSGINGVPG 260
           G +G  G++G T               G +GN G  G  G+PG
Sbjct: 881 GKSGPRGQRGPTGPRGGRGARGPTGKPGAKGNSGNDGPPGLPG 923



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 91/200 (45%), Gaps = 27/200 (13%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEG------ 158
           E  P GL GP G  G  G +G  G+ G+ G KG     G  GPPG QG+PG  G      
Sbjct: 654 EMGPRGLLGPRGSPGPAGQRGLPGLDGQPGPKGNMGPQGEAGPPGQQGMPGPNGLIGPQG 713

Query: 159 ------KRGPKGDMGY---PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPG 206
                 ++GP+G  G     G  G PG  GK GP   KG  G+PG +G  G  G  G  G
Sbjct: 714 PIGPPGEKGPQGKQGLHGLAGADGPPGHPGKEGPPGEKGAAGHPGPMGSIGYPGPRGVKG 773

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            +GI G  G  G  G+DG PG  G  G  G  GE G+ GPRG  G  G  G  G      
Sbjct: 774 AEGIRGLKGDKGEKGEDGFPGFKGDMGLKGDKGENGVLGPRGEDGPEGPKGKSGPTG--- 830

Query: 267 YKRESCSLLPNSETSQLLIP 286
              ES  +    E  +L +P
Sbjct: 831 ---ESGPMGSAGEKGKLGVP 847



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 84/163 (51%), Gaps = 30/163 (18%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG+MG+KG++GE G   V+GP G  G  G +GK GP G+ G  
Sbjct: 779 GLKGDKGEKGEDGFPGFKGDMGLKGDKGENG---VLGPRGEDGPEGPKGKSGPTGESG-- 833

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG-- 227
            P G  G++GK G  G  GYPGR G  G +G PG PG +   G  G  GI GK G  G  
Sbjct: 834 -PMGSAGEKGKLGVPGLPGYPGRQGSKGSNGFPGFPGAN---GEKGARGIAGKSGPRGQR 889

Query: 228 ----------------KDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                           K G  G +G +G  G+ G RG +G  G
Sbjct: 890 GPTGPRGGRGARGPTGKPGAKGNSGNDGPPGLPGERGPQGPQG 932



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 82/175 (46%), Gaps = 30/175 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------ 166
           G  GP G+ G+ G  G  G +G  GE GA G  G  G  G+PG++G RG +G        
Sbjct: 575 GSTGPPGKSGKRGRNGADGARGMPGEAGAKGDRGFDGLPGLPGEKGHRGEQGSTGPPGPP 634

Query: 167 ---------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
                    G  G +G+ G+ G RG  G  G PG  G  G       PGLDG PG  G  
Sbjct: 635 GEDGPRGEDGQVGQRGVAGEMGPRGLLGPRGSPGPAGQRGL------PGLDGQPGPKGNM 688

Query: 218 GIPGKDGLPGKDGIPGTNG---------TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G+ G PG+ G+PG NG           GEKG  G +G  G +G +G PG P 
Sbjct: 689 GPQGEAGPPGQQGMPGPNGLIGPQGPIGPPGEKGPQGKQGLHGLAGADGPPGHPG 743



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/106 (48%), Positives = 60/106 (56%), Gaps = 12/106 (11%)

Query: 113  GLQGPIGQKG---------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            G+QGPIG  G         E G KGE+G  G++G KG  G +GPPGP G+ G  G  GP 
Sbjct: 1112 GIQGPIGLPGPAGPQGPPGEDGDKGEVGGPGQKGSKGDKGELGPPGPTGLQGVVGAPGPA 1171

Query: 164  GDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            G  G  GP   QG+ G +G  GP+G  G PG IGL G  G PGE G
Sbjct: 1172 GSDGEAGPRGQQGMFGQKGDEGPRGFPGLPGPIGLQGLPGPPGEKG 1217



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/153 (39%), Positives = 72/153 (47%), Gaps = 30/153 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G +G KG+   KGE GV G RGE G  G  G  GP G  G  G  G KG +G P  
Sbjct: 793 PGFKGDMGLKGD---KGENGVLGPRGEDGPEGPKGKSGPTGESGPMGSAGEKGKLGVP-- 847

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------ 219
            G+PG  G++G KG  G+PG  G +      GE G  GI G++G  G             
Sbjct: 848 -GLPGYPGRQGSKGSNGFPGFPGAN------GEKGARGIAGKSGPRGQRGPTGPRGGRGA 900

Query: 220 ------PGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                 PG  G  G DG PG  G  G +G  GP
Sbjct: 901 RGPTGKPGAKGNSGNDGPPGLPGERGPQGPQGP 933



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 83/190 (43%), Gaps = 36/190 (18%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPG------------ 155
           PPG  G  G+ G  GA+G   E G KG+RG  G PG+ G  G +G  G            
Sbjct: 579 PPGKSGKRGRNGADGARGMPGEAGAKGDRGFDGLPGLPGEKGHRGEQGSTGPPGPPGEDG 638

Query: 156 ---DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
              ++G+ G +G  G  GP+G+ G  G  GP G  G PG   LDG+ G  G  G  G  G
Sbjct: 639 PRGEDGQVGQRGVAGEMGPRGLLGPRGSPGPAGQRGLPG---LDGQPGPKGNMGPQGEAG 695

Query: 213 RNGMDGIPGKDGLP---------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G+PG +GL                GK G+ G  G +G  G  G  G  G+ G  G
Sbjct: 696 PPGQQGMPGPNGLIGPQGPIGPPGEKGPQGKQGLHGLAGADGPPGHPGKEGPPGEKGAAG 755

Query: 258 VPGTPAICAY 267
            PG      Y
Sbjct: 756 HPGPMGSIGY 765



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 58/133 (43%), Positives = 72/133 (54%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G +G+ GE G PG  GP G  G+PG  GKRGP G  G  G QG  G +G+ G +G +G  
Sbjct: 1340 GDRGDDGEAGQPGPSGPSGEAGVPGPPGKRGPAGPAGQSGRQGEKGSKGEAGAEGPVGKT 1399

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G +G  G  G PG  GL GIPG  G  G+ G  G  G  G  G  G  G KG +G +G +
Sbjct: 1400 GPVGPQGPPGKPGAEGLRGIPGPVGEQGLAGASGQDGPPGPIGPPGLPGMKGDSGSKGEK 1459

Query: 251  GKSGINGVPGTPA 263
            G  G+ G+ G P 
Sbjct: 1460 GHPGLIGLIGPPG 1472



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 12/91 (13%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G PG +G +G KG++G PGP G+         +G +G PG  G DG  G  G+ G+ G  
Sbjct: 1139 GGPGQKGSKGDKGELGPPGPTGL---------QGVVGAPGPAGSDGEAGPRGQQGMFGQK 1189

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            G  G  G P   GLPG  G+ G  G  GEKG
Sbjct: 1190 GDEGPRGFP---GLPGPIGLQGLPGPPGEKG 1217



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 62/119 (52%), Gaps = 15/119 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGK 159
           PGL G  G++G  G+ G  G  G  GEKGA G+ G  GP+G              G  GK
Sbjct: 847 PGLPGYPGRQGSKGSNGFPGFPGANGEKGARGIAGKSGPRGQRGPTGPRGGRGARGPTGK 906

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            G KG+ G  GP G+PG+ G +GP+G +   G  G  G  G+DGLPG PG  G  G  G
Sbjct: 907 PGAKGNSGNDGPPGLPGERGPQGPQGPVGFPGPKGPNGPPGKDGLPGHPGQRGETGFQG 965



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 15/107 (14%)

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG------- 218
            G  GP G  G  G+ G  G  G PG  G  G  G  G PGL G  G  G  G       
Sbjct: 574 QGSTGPPGKSGKRGRNGADGARGMPGEAGAKGDRGFDGLPGLPGEKGHRGEQGSTGPPGP 633

Query: 219 -----IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                  G+DG  G+ G+    G  G +G+ GPRG+ G +G  G+PG
Sbjct: 634 PGEDGPRGEDGQVGQRGV---AGEMGPRGLLGPRGSPGPAGQRGLPG 677



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 29/53 (54%)

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           G  G PGK G  G NG +G +GM G  G +G  G +G+PG P    ++ E  S
Sbjct: 575 GSTGPPGKSGKRGRNGADGARGMPGEAGAKGDRGFDGLPGLPGEKGHRGEQGS 627



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 43/94 (45%), Gaps = 21/94 (22%)

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G PG +G +G KG++G PG  GL G  G PG  G DG  G  G  G+             
Sbjct: 1139 GGPGQKGSKGDKGELGPPGPTGLQGVVGAPGPAGSDGEAGPRGQQGM------------- 1185

Query: 233  GTNGTNGEKGMTGPRGNRGKS---GINGVPGTPA 263
                  G+KG  GPRG  G     G+ G+PG P 
Sbjct: 1186 -----FGQKGDEGPRGFPGLPGPIGLQGLPGPPG 1214


>gi|301766574|ref|XP_002918709.1| PREDICTED: collagen alpha-2(V) chain-like [Ailuropoda melanoleuca]
          Length = 1016

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/151 (48%), Positives = 86/151 (56%), Gaps = 6/151 (3%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGYPGPQ 172
           GP G +G+ G  G  G KGE G KG PG  G  GP G  G+EGKRGP+GD   +G PGP 
Sbjct: 99  GPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPAGEEGKRGPRGDPGTVGPPGPV 158

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKD 229
           G  G +G+RGP G  G  G  G  GR G PG PG  G PG +G  G PG  G+   PG  
Sbjct: 159 GERGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGAPGEDGRPGPPGSIGIRGQPGSM 218

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+PG  G++G+ G  G  GN G  G  G PG
Sbjct: 219 GLPGPKGSSGDPGKPGEAGNAGVPGQRGAPG 249



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/162 (43%), Positives = 86/162 (53%), Gaps = 12/162 (7%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   +  E   PG+ G  G+KG  G  G  G KG  G  G PG  GPPG QG+PG+   
Sbjct: 281 QGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGE--- 337

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
              +G  G PGP+   GD G+ GP+G +G PG  G  G DG PG  G  G PG+ G  G 
Sbjct: 338 ---RGIAGTPGPK---GDRGEPGPRGLVGPPGSRGNPGPDGQPGVKGEPGEPGQKGDAGS 391

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 392 PGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 430



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 80/162 (49%), Gaps = 21/162 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 112 VPGFKGEAGPKGEPGPHGIQGPIGPAGE---------EGKRGPRGDPGTVGPPGPVGERG 162

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            +G+RGP             G  G +G +GD G PG  GL G  G PGE G  G PG  G
Sbjct: 163 AQGERGPV------------GSSGPKGGQGDPGRPGEPGLPGARGAPGEDGRPGPPGSIG 210

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           + G PG  GLPG  G  G  G  GE G  G  G RG  G +G
Sbjct: 211 IRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDG 252



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 95/210 (45%), Gaps = 57/210 (27%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD----- 165
           PPG  G  G +GE G  G  G KG +G+ G PG  G PG +G PG++G+ GP G      
Sbjct: 154 PPGPVGERGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGAPGEDGRPGPPGSIGIRG 213

Query: 166 ----MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------------- 199
               MG PGP+G  GD GK G  G+ G PG+ G  G+D                      
Sbjct: 214 QPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLPGPPGPPG 273

Query: 200 --------------GLPGEPGLDGIPGRNGM---------DGIPGKDGLPGKDGIPGTNG 236
                         G  GEPG+ G+PG  GM          G PG  G PG  G PG  G
Sbjct: 274 EGGKPGDQGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQG 333

Query: 237 TNGEKGMT---GPRGNRGKSGINGVPGTPA 263
             GE+G+    GP+G+RG+ G  G+ G P 
Sbjct: 334 MPGERGIAGTPGPKGDRGEPGPRGLVGPPG 363



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 96/211 (45%), Gaps = 45/211 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQG---------PIGQKGEIGAKGEMGVKGERGEKGAPGV---- 144
            M+G    T    P G QG         P+G +G  GA G  G  G +G  G+PG     
Sbjct: 24  GMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGPTGSPGTSGPP 83

Query: 145 --------------VGPPGPQGIPGDEGKRGPKGDMG---YPGPQGI------PGDEGKR 181
                          GPPG +G PGD G  G KG+ G    PGP GI       G+EGKR
Sbjct: 84  GLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPAGEEGKR 143

Query: 182 GPKGD---MGYPGRIGLDGRD------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           GP+GD   +G PG +G  G        G  G  G  G PGR G  G+PG  G PG+DG P
Sbjct: 144 GPRGDPGTVGPPGPVGERGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGAPGEDGRP 203

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G+ G +G  G  G  G  G +G PG P 
Sbjct: 204 GPPGSIGIRGQPGSMGLPGPKGSSGDPGKPG 234



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 75/147 (51%), Gaps = 12/147 (8%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   +G         P G  GP G  G+ G  G  G+ GERG      + G PGP+   G
Sbjct: 298 LPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERG------IAGTPGPK---G 348

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D G+ GP+G +G PG +G PG +G+ G KG+ G PG+    G  G PG  GL G PG +G
Sbjct: 349 DRGEPGPRGLVGPPGSRGNPGPDGQPGVKGEPGEPGQ---KGDAGSPGPQGLAGSPGPHG 405

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            +G+PG  G  G  G PG  G  G  G
Sbjct: 406 PNGVPGLKGGRGTQGPPGATGFPGSAG 432



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 89/213 (41%), Gaps = 48/213 (22%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   +G         PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG
Sbjct: 190 LPGARGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPG 249

Query: 156 ------------------------------DEGKRGPKGDMGYPGPQGIPGDE------G 179
                                         D+G+RG  G+ G PG  G+PG++      G
Sbjct: 250 KDGEVGPSGPVGPPGLPGPPGPPGEGGKPGDQGERGNPGERGEPGITGLPGEKGMAGGHG 309

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---------PG 227
             GPKG     G PG  G  G  G+PGE G+ G PG  G  G PG  GL         PG
Sbjct: 310 PDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGEPGPRGLVGPPGSRGNPG 369

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            DG PG  G  GE G  G  G+ G  G+ G PG
Sbjct: 370 PDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 402



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 79/164 (48%), Gaps = 36/164 (21%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------------KGD 165
            G +G +G+ G+RGE+G PG+   PGP G P   GK GP                   G 
Sbjct: 506 TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGAPGDKGPPGPVGPPGSNGP 559

Query: 166 MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 560 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 619

Query: 220 PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PG        G  GK G+ G  G  G+KG  G RG+RG+ G  G
Sbjct: 620 PGSRGPIGPPGRTGKRGLLGPQGPRGDKGDHGDRGDRGQKGHRG 663



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 79/198 (39%), Gaps = 42/198 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP+G  G  G  G  G+KGE G  GA    GP GPQG  G+ G  GP G  G PG 
Sbjct: 5   PGPMGPLGIPGSSGFPGNPGMKGEAGPTGA---RGPEGPQGQRGETGPPGPVGSQGLPGA 61

Query: 172 QGIPGDEGKRGP------------------------------KGDMGYPGRIGLDGRDGL 201
            G  G  G +GP                              +G  G PG  G  G  G 
Sbjct: 62  VGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGP 121

Query: 202 PGEPGLDGI---------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            GEPG  GI          G+ G  G PG  G PG  G  G  G  G  G +GP+G +G 
Sbjct: 122 KGEPGPHGIQGPIGPAGEEGKRGPRGDPGTVGPPGPVGERGAQGERGPVGSSGPKGGQGD 181

Query: 253 SGINGVPGTPAICAYKRE 270
            G  G PG P       E
Sbjct: 182 PGRPGEPGLPGARGAPGE 199



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 88/225 (39%), Gaps = 84/225 (37%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG----- 155
           G   +  +  PPGLQG     GE G  G  G KG+RGE G  G+VGPPG +G PG     
Sbjct: 318 GPSGTPGDTGPPGLQG---MPGERGIAGTPGPKGDRGEPGPRGLVGPPGSRGNPGPDGQP 374

Query: 156 ----DEGKRGPKGDMGYPGPQG------------IPGDEGKRG---PKGDMGYPGRIGLD 196
               + G+ G KGD G PGPQG            +PG +G RG   P G  G+PG  G  
Sbjct: 375 GVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRV 434

Query: 197 ---------------GRDGLPGEPGLDGIPG----------------------------- 212
                          G  G  G PGL G PG                             
Sbjct: 435 GPPGPPGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQP 494

Query: 213 -------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                        + G+ G+PG+ G  G  G+PG  GT G+ G T
Sbjct: 495 GPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPT 539



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 66/149 (44%), Gaps = 27/149 (18%)

Query: 140 GAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           G PG +GP   PG  G PG+ G +G  G  G  GP+G  G  G+ GP G +G  G  G  
Sbjct: 3   GKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAV 62

Query: 197 GRDGLPGEPGLDGIPGRNGMD---------------GIPGKDGLPGKDGIPGTNGTNGEK 241
           G DG PG  G  G PG +G                 G PG  G PG  G+PG  G  G K
Sbjct: 63  GTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPK 122

Query: 242 GMTGPR---------GNRGKSGINGVPGT 261
           G  GP          G  GK G  G PGT
Sbjct: 123 GEPGPHGIQGPIGPAGEEGKRGPRGDPGT 151



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 49/90 (54%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 575 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRTGK 634

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
           +G+ G +G RG KGD G  G  G  G  G 
Sbjct: 635 RGLLGPQGPRGDKGDHGDRGDRGQKGHRGF 664



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 60/117 (51%), Gaps = 3/117 (2%)

Query: 158 GKRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           GK GP G +G PG  G PG+   +G+ GP G  G  G  G  G  G PG  G  G+PG  
Sbjct: 3   GKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAV 62

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G DG PG  G  G  G  G  G  G  G  GP+G+ G  GI G PG P +  +K E+
Sbjct: 63  GTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEA 119


>gi|119607818|gb|EAW87412.1| collagen, type XXVII, alpha 1, isoform CRA_b [Homo sapiens]
          Length = 827

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 93/167 (55%), Gaps = 16/167 (9%)

Query: 133 KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           +G+RGE G PG  G  G QG+   PG +G+ G  G  G+PGP+G  G EG +G +G  G 
Sbjct: 321 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGA 380

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
           PGR G+ G  GLPG     G+ GR G++GI G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 381 PGRRGVQGLQGLPGP---RGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 437

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
            G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 438 AGKRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 477



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 104/239 (43%), Gaps = 41/239 (17%)

Query: 43  DKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGF 102
           D+GD  +   P  P  E V     + +R +  +Q    H  P  W             G 
Sbjct: 320 DRGDRGEPGDPGYPGQEGV-----QGLRGKPGQQGQPGHPGPRGW------------PGP 362

Query: 103 CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------- 155
             S     P G QG  G  G  G +G  G+ G RG  G  G+ G  GP G+PG       
Sbjct: 363 KGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQ 422

Query: 156 --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRDGL 201
                   D G  GP G  G PG  G+PG +G  G KG+ G PG++      G +GR GL
Sbjct: 423 QGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGL 482

Query: 202 P---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           P   GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G
Sbjct: 483 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVG 541



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 85/176 (48%), Gaps = 18/176 (10%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            +QG      +   PG  GP G  G  G+KG  G KG++G+ GAPG  G  G QG+PG  
Sbjct: 337 GVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPR 396

Query: 158 GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G  G +G  G  GP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 397 GVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 456

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G  G+PG+    G PGK G  G+ G+PG  G  G KG  G  G  G  G+ G+
Sbjct: 457 GFKGESGLPGQL---GPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGL 509



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/141 (44%), Positives = 79/141 (56%), Gaps = 12/141 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G++G  G  G  G +G    +GE G PG +GPPG         KRG +G  G 
Sbjct: 432 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGRTGL 482

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 483 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGP 542

Query: 229 DGIPGTNGTNGEKGMTGPRGN 249
            GI G +G  G KG  G RG+
Sbjct: 543 LGILGPSGLPGPKGDKGSRGD 563



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 101/223 (45%), Gaps = 41/223 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
           G +G  G  G  G +G  G++G+ G++G PG  GP   PGP+G  G EG +G +G  G P
Sbjct: 322 GDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAP 381

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------------------- 204
           G +G+ G +G  GP+G +G  G  G+ G DGLPG                          
Sbjct: 382 GRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKR 441

Query: 205 --PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
             PG+ G+PG  G  G  G+ GLPG+ G PG  GT G  G+    GN+G+ G  G PG  
Sbjct: 442 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLP---GNQGEPGSKGQPGDS 498

Query: 263 AICAYKRESCSLLPNSETSQLLI--------PPTIVGSEHIFS 297
               +   +    P      +          PP ++G E I  
Sbjct: 499 GEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVG 541



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 89/245 (36%), Gaps = 76/245 (31%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------- 146
           QG      E    G  GP+G  G  G +G+ G  GE GEKG  G++G             
Sbjct: 146 QGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGV 205

Query: 147 --PPGPQGIPGDEGKRGPKGDMGYP---------------------------GPQGIPGD 177
             P G  G  G++G+ G KG  GY                            GP G PG 
Sbjct: 206 RGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGR 265

Query: 178 EGKRGPKGDMGYPGRIGL---------------DGRDGLP-------------------G 203
            G +G  G  GY G  G+                G DG                     G
Sbjct: 266 MGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRG 325

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           EPG  G PG+ G+ G+ GK G  G+ G PG  G  G KG  G  G +GK G  G PG   
Sbjct: 326 EPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRG 385

Query: 264 ICAYK 268
           +   +
Sbjct: 386 VQGLQ 390



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 68/159 (42%), Gaps = 39/159 (24%)

Query: 112 PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 125 PGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGE 184

Query: 169 PGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEP-------- 205
            G +G+ G+               EGK G +G+ G  G  G  G  G  GE         
Sbjct: 185 KGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGP 244

Query: 206 -------------GLDGIPGRNGMDGIPGKDGLPGKDGI 231
                        G  G PGR G  G PG  G  G  GI
Sbjct: 245 PGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGI 283



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 30/143 (20%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           +G KG  GA GE G+ GE G KG  G      P G PG++G  G +G+         PG 
Sbjct: 113 MGPKGPPGAVGEPGLPGEAGMKGDLG------PLGTPGEQGLIGQRGE---------PGL 157

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GI 231
           EG  GP         +G DG  G  G+PG DG  G  G +G+ G+DG PG        G 
Sbjct: 158 EGDSGP---------MGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGP 208

Query: 232 PGTNGTNGEKGMTGPRGNRGKSG 254
            G +G  GEKG TG +G +G  G
Sbjct: 209 EGKSGKQGEKGRTGAKGAKGYQG 231


>gi|291407756|ref|XP_002720230.1| PREDICTED: type IV alpha 6 collagen [Oryctolagus cuniculus]
          Length = 1744

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/160 (45%), Positives = 92/160 (57%), Gaps = 13/160 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR-------GPKG 164
            PGL G  G +G +G  G  G  G +G  G PG+ G PGPQG  GD+G+        GPKG
Sbjct: 1079 PGLPGLKGSRGIMGFPGMPGKSGSQGLNGTPGLPGSPGPQGSKGDQGQTFKVSGNPGPKG 1138

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
              G     G+ G +GK GP GDMG+PG  G +G+ G+ G+ GL G PG  G+ G+ G  G
Sbjct: 1139 KTGE---SGLKGQKGKDGPAGDMGFPGNKGENGKTGIAGDIGLPGSPGLPGIAGVRGDPG 1195

Query: 225  LPGKDGIPGTNGTNGEKGMTGPRGNRGKS---GINGVPGT 261
            LPG  G PG  G  G  G+ GP+G+ G     G+NG+PGT
Sbjct: 1196 LPGFSGHPGVAGPLGSSGLVGPKGSPGLPGLHGLNGLPGT 1235



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 92/187 (49%), Gaps = 39/187 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGPPGPQGIPGDEGKRG----- 161
           G QGP G  G  G  G  G KGE+GE       G PG  G PGP+G PG  G RG     
Sbjct: 575 GTQGPAGAPGSHGPPGPAGSKGEKGEPTLSTQSGMPGEKGDPGPRGFPGVTGARGEDGAP 634

Query: 162 ---------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                      G  G+PG +G PG  G++G +G +G PG        GLPG PG  G+PG
Sbjct: 635 GLPGLPGLPGDGAQGFPGERGFPGLPGEKGQRGPIGLPGI-------GLPGLPGPRGLPG 687

Query: 213 RNGMDGIPGKDGLPGKDGIP---------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G DG+PGK GLPG  GI          G +G++G  G  GP+G +G   + G PG P 
Sbjct: 688 DQGRDGLPGKQGLPGPPGITLPCITSGLYGPSGSSGAPGFPGPKGTQG---LPGTPGQPG 744

Query: 264 ICAYKRE 270
           +   K E
Sbjct: 745 LRGNKGE 751



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 88/176 (50%), Gaps = 36/176 (20%)

Query: 113  GLQGPIGQKGEIGAKGEM------------GVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            GL GP G++G  G+ G M            G+KG+ G  GAPG        GI G  GKR
Sbjct: 845  GLPGPKGERGSPGSPGLMGQPGPSGSGGLYGIKGKSGLPGAPGF------PGIAGHPGKR 898

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---------- 210
            GPKG+ GYP   G  G  G+ G +G  G PG  GL G  GLPG+ GL G+          
Sbjct: 899  GPKGETGYP---GATGKRGQPGLQGHSGSPGAAGLLGSPGLPGDTGLPGLLGPKGEKGSV 955

Query: 211  -----PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                 PG  G+ GIPG  GL G  G PG  G  G+ G  G +G+RG  G  G+PG+
Sbjct: 956  GLVGFPGVPGLPGIPGTSGLKGISGSPGKLGAFGQAGGPGEKGHRGDPGPAGIPGS 1011



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 88/181 (48%), Gaps = 44/181 (24%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDM 187
           G+ G  G  GAPG  GP G QG+PG  G+ G +G+ G PG  G+   P   G  GP+G+ 
Sbjct: 714 GLYGPSGSSGAPGFPGPKGTQGLPGTPGQPGLRGNKGEPGNPGLVHLPELPGFPGPRGEK 773

Query: 188 GYPGRIGLDGRDGLPGE------PGLDGI-----------PGRNGMDGIPGKDGLPGKDG 230
           G PG  GL G+DGLPG+      PG  G+           PG+ G+ G+PG  G+ G  G
Sbjct: 774 GLPGFPGLPGKDGLPGKAGGPGLPGSKGVPGDIFGAENGAPGKQGLQGLPGDKGVSGDSG 833

Query: 231 IPGTNGTNGEKGMTGPRGNR------------------------GKSGINGVPGTPAICA 266
           +PG  G +G  G+ GP+G R                        GKSG+ G PG P I  
Sbjct: 834 LPGPKGLHGRSGLPGPKGERGSPGSPGLMGQPGPSGSGGLYGIKGKSGLPGAPGFPGIAG 893

Query: 267 Y 267
           +
Sbjct: 894 H 894



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 92/185 (49%), Gaps = 46/185 (24%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGP--PGPQGIPGDEGKRGPKGDMGYPGPQGI----- 174
           GE G  G  G KG+RG  G PG+  P  PGP+G+PGD+G+ G  G  G PGP GI     
Sbjct: 652 GERGFPGLPGEKGQRGPIGLPGIGLPGLPGPRGLPGDQGRDGLPGKQGLPGPPGITLPCI 711

Query: 175 -------------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------DGIPGRNG 215
                        PG  G +G +G  G PG+ GL G  G PG PGL       G PG  G
Sbjct: 712 TSGLYGPSGSSGAPGFPGPKGTQGLPGTPGQPGLRGNKGEPGNPGLVHLPELPGFPGPRG 771

Query: 216 ------MDGIPGKDGLPGKDGIPG--------------TNGTNGEKGMTGPRGNRGKSGI 255
                   G+PGKDGLPGK G PG               NG  G++G+ G  G++G SG 
Sbjct: 772 EKGLPGFPGLPGKDGLPGKAGGPGLPGSKGVPGDIFGAENGAPGKQGLQGLPGDKGVSGD 831

Query: 256 NGVPG 260
           +G+PG
Sbjct: 832 SGLPG 836



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 88/185 (47%), Gaps = 41/185 (22%)

Query: 112 PGLQGPIGQKGEI-----GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           PGL G  G  G+I     GA G+ G++G  G+KG  G  G PGP+G+ G  G  GPKG+ 
Sbjct: 794 PGLPGSKGVPGDIFGAENGAPGKQGLQGLPGDKGVSGDSGLPGPKGLHGRSGLPGPKGER 853

Query: 167 GYPGPQG------------------------------IPGDEGKRGPKGDMGYPGRIGLD 196
           G PG  G                              I G  GKRGPKG+ GYPG  G  
Sbjct: 854 GSPGSPGLMGQPGPSGSGGLYGIKGKSGLPGAPGFPGIAGHPGKRGPKGETGYPGATGKR 913

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G      +PGL G  G  G  G+ G  GLPG  G+PG  G  GEKG  G  G  G  G+ 
Sbjct: 914 G------QPGLQGHSGSPGAAGLLGSPGLPGDTGLPGLLGPKGEKGSVGLVGFPGVPGLP 967

Query: 257 GVPGT 261
           G+PGT
Sbjct: 968 GIPGT 972



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 87/181 (48%), Gaps = 35/181 (19%)

Query: 112 PGLQGPIGQKG---------EIGAKGEMGVKGERGEKGAPGVV-----GPPGPQGIPGDE 157
           PG  GP G+KG         + G  G+ G  G  G KG PG +     G PG QG+ G  
Sbjct: 764 PGFPGPRGEKGLPGFPGLPGKDGLPGKAGGPGLPGSKGVPGDIFGAENGAPGKQGLQGLP 823

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---------------DGRDGLP 202
           G +G  GD G PGP+G+ G  G  GPKG+ G PG  GL                G+ GLP
Sbjct: 824 GDKGVSGDSGLPGPKGLHGRSGLPGPKGERGSPGSPGLMGQPGPSGSGGLYGIKGKSGLP 883

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           G PG  GI G       PGK G  G+ G PG  G  G+ G+ G  G+ G +G+ G PG P
Sbjct: 884 GAPGFPGIAGH------PGKRGPKGETGYPGATGKRGQPGLQGHSGSPGAAGLLGSPGLP 937

Query: 263 A 263
            
Sbjct: 938 G 938



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 37/175 (21%)

Query: 112  PGLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGVVGPPGP------------QGI 153
            PG+ GP G KG++G        GE+G+KG RGE   PG +G PG             +G 
Sbjct: 1350 PGIPGPRGPKGDLGIPGFSGLPGELGLKGMRGE---PGFMGIPGKVGPPGDPGFPGMKGK 1406

Query: 154  PGDEGKRGPKGDMGY----------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             G  G  GP+G  G           PGP G+PG +G  G  GD G PG +GL G  GLP 
Sbjct: 1407 AGSRGFPGPQGAPGQTPIAEAIQVPPGPLGLPGIDGIPGLTGDPGTPGPVGLQGSKGLP- 1465

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                 GIPG++G  G+PG  G  G  G+PG  G  G +G  G +G  G+ G+ G+
Sbjct: 1466 -----GIPGKDGSSGLPGPPGALGDPGLPGLQGPPGFEGAPGKQGPFGRPGMPGL 1515



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 89/194 (45%), Gaps = 51/194 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ--GIPGDEGKRGPKGDM 166
            PG+ GP+G  G +G KG  G+ G  G  G PG  G    PGP   G+PG  G  G KG+ 
Sbjct: 1203 PGVAGPLGSSGLVGPKGSPGLPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGAKGEK 1262

Query: 167  GYPGPQ-GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------GIPGRNGM 216
            G PG   G PG  G RG KG  G+PG   L G  GLPG PG+          G PGR G+
Sbjct: 1263 GTPGIGIGAPGKPGIRGQKGGQGFPG---LQGPAGLPGAPGISLPSLIAGQPGDPGRPGL 1319

Query: 217  DG------------------------------IPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            DG                              IPG  G  G  GIPG +G  GE G+   
Sbjct: 1320 DGERGRPGPQGPPGPPGPSADQGDSGDPGFPGIPGPRGPKGDLGIPGFSGLPGELGL--- 1376

Query: 247  RGNRGKSGINGVPG 260
            +G RG+ G  G+PG
Sbjct: 1377 KGMRGEPGFMGIPG 1390



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 81/140 (57%), Gaps = 14/140 (10%)

Query: 135 ERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           E+GEKG PG+ GP GP   +G+ G  GK+G KG  G+PG  G+PG +G+   KG +G PG
Sbjct: 339 EKGEKGIPGLPGPRGPMGSEGVQGPAGKQGKKGTSGFPGLNGLPGIKGE---KGAIGLPG 395

Query: 192 R---IGLDGR--DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
               I +DG    G PG+PG+ G+PG  G +GI G     G  GIPG     G +G+ GP
Sbjct: 396 PDIFIDVDGAVISGYPGDPGVPGLPGLKGDEGIQGPR---GPSGIPGLPSLPGIQGILGP 452

Query: 247 RGNRGKSGINGVPGTPAICA 266
           +G+ G  G  G PG   + A
Sbjct: 453 QGSPGLKGDQGNPGRTTVGA 472



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 76/148 (51%), Gaps = 12/148 (8%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G  G+MG  G +GE G  G+ G     G+PG  G  G  G  G P   G+PG  
Sbjct: 1147 GQKGKDGPAGDMGFPGNKGENGKTGIAGD---IGLPGSPGLPGIAGVRGDP---GLPGFS 1200

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD--GLPGKDGIPGTNG 236
            G  G  G +G  G +G  G  GLPG  GL+G+PG  G  G PG    G+PG  G+PG  G
Sbjct: 1201 GHPGVAGPLGSSGLVGPKGSPGLPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGAKG 1260

Query: 237  TNGEKGMT----GPRGNRGKSGINGVPG 260
              G  G+     G  G RG+ G  G PG
Sbjct: 1261 EKGTPGIGIGAPGKPGIRGQKGGQGFPG 1288



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 80/183 (43%), Gaps = 40/183 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL GP G+KG +G  G  GV G  G     G  G+ G PG  G  G  G  G KG  G 
Sbjct: 943  PGLLGPKGEKGSVGLVGFPGVPGLPGIPGTSGLKGISGSPGKLGAFGQAGGPGEKGHRGD 1002

Query: 169  PGPQGIPGDE------------------------GKRGPKGDM------------GYPGR 192
            PGP GIPG                          G RG KG+             G P  
Sbjct: 1003 PGPAGIPGSRFPTLNILLKGDKGSQGSAGSSGFPGLRGDKGETGLPGLPGLPGTRGLPST 1062

Query: 193  I-GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            I GL G  G  G  GL G+PG  G  GI G  G+PGK G  G NGT G  G  GP+G++G
Sbjct: 1063 IKGLPGNPGPSGSTGLPGLPGLKGSRGIMGFPGMPGKSGSQGLNGTPGLPGSPGPQGSKG 1122

Query: 252  KSG 254
              G
Sbjct: 1123 DQG 1125



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 93/217 (42%), Gaps = 64/217 (29%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGD--- 165
            PG +GP G+ G  GA G+ G  G +G  G+PG  G  G  G+PGD    G  GPKG+   
Sbjct: 895  PGKRGPKGETGYPGATGKRGQPGLQGHSGSPGAAGLLGSPGLPGDTGLPGLLGPKGEKGS 954

Query: 166  ---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGI------ 210
               +G+PG  G+PG  G  G KG  G PG++G  G+ G PGE      PG  GI      
Sbjct: 955  VGLVGFPGVPGLPGIPGTSGLKGISGSPGKLGAFGQAGGPGEKGHRGDPGPAGIPGSRFP 1014

Query: 211  ---------------------PGRNG----------------------MDGIPGKDGLPG 227
                                 PG  G                      + G+PG  G  G
Sbjct: 1015 TLNILLKGDKGSQGSAGSSGFPGLRGDKGETGLPGLPGLPGTRGLPSTIKGLPGNPGPSG 1074

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G+PG  G  G +G+ G  G  GKSG  G+ GTP +
Sbjct: 1075 STGLPGLPGLKGSRGIMGFPGMPGKSGSQGLNGTPGL 1111



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 96/243 (39%), Gaps = 86/243 (35%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPPGPQ 151
            G+  +T +   PGLQG  G  G  G  G  G+ G+         +GEKG+ G+VG PG  
Sbjct: 905  GYPGATGKRGQPGLQGHSGSPGAAGLLGSPGLPGDTGLPGLLGPKGEKGSVGLVGFPGVP 964

Query: 152  GIP---------------------GDEGKRGPKGDMGYPGPQGIPGDE------------ 178
            G+P                     G  G  G KG  G PGP GIPG              
Sbjct: 965  GLPGIPGTSGLKGISGSPGKLGAFGQAGGPGEKGHRGDPGPAGIPGSRFPTLNILLKGDK 1024

Query: 179  ------------GKRGPKGDM-------------------GYPGRIGLDGRDGLPGEPGL 207
                        G RG KG+                    G PG  G  G  GLPG PGL
Sbjct: 1025 GSQGSAGSSGFPGLRGDKGETGLPGLPGLPGTRGLPSTIKGLPGNPGPSGSTGLPGLPGL 1084

Query: 208  DGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMT-------GPRGNRGKSG 254
             G  G  G  G+PGK      +G PG  G PG  G+ G++G T       GP+G  G+SG
Sbjct: 1085 KGSRGIMGFPGMPGKSGSQGLNGTPGLPGSPGPQGSKGDQGQTFKVSGNPGPKGKTGESG 1144

Query: 255  ING 257
            + G
Sbjct: 1145 LKG 1147



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 88/201 (43%), Gaps = 49/201 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMGY 168
            PGL G  G +G+ G  G  G  G  G  G+ G+VGP G  G+PG  G  G    KG  G 
Sbjct: 1182 PGLPGIAGVRGDPGLPGFSGHPGVAGPLGSSGLVGPKGSPGLPGLHGLNGLPGTKGTHGT 1241

Query: 169  PGPQ--GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            PGP   G+PG  G  G KG+ G PG IG+    G PG+PG+ G  G  G  G+ G  GLP
Sbjct: 1242 PGPSITGVPGPAGLPGAKGEKGTPG-IGI----GAPGKPGIRGQKGGQGFPGLQGPAGLP 1296

Query: 227  GKDGI------------PGTNGTNGEK---------------------------GMTGPR 247
            G  GI            PG  G +GE+                           G+ GPR
Sbjct: 1297 GAPGISLPSLIAGQPGDPGRPGLDGERGRPGPQGPPGPPGPSADQGDSGDPGFPGIPGPR 1356

Query: 248  GNRGKSGINGVPGTPAICAYK 268
            G +G  GI G  G P     K
Sbjct: 1357 GPKGDLGIPGFSGLPGELGLK 1377



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 68/134 (50%), Gaps = 21/134 (15%)

Query: 119 GQKGEIGAKGEMGVKGERGEKG----APGV--VGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GE G KG  G+KG +G+ G      GV  +GPPG      + G+RGP+G MG PG Q
Sbjct: 512 GLRGEQGLKGNPGLKGVKGDPGFCACDGGVLDIGPPG------EPGQRGPQGLMGPPGVQ 565

Query: 173 GI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G    PG  G +GP G  G  G  G  G  G  GEP L      +   G+PG+ G PG  
Sbjct: 566 GTRGDPGSRGTQGPAGAPGSHGPPGPAGSKGEKGEPTL------STQSGMPGEKGDPGPR 619

Query: 230 GIPGTNGTNGEKGM 243
           G PG  G  GE G 
Sbjct: 620 GFPGVTGARGEDGA 633



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 97/239 (40%), Gaps = 81/239 (33%)

Query: 113 GLQGPIGQKGEIGAKG------EMGVKGERGEKGAPG-----------VVGPPGPQGIP- 154
           G+QGP G++G+ G  G        G+KGE+G  G PG           + G PG  G+P 
Sbjct: 359 GVQGPAGKQGKKGTSGFPGLNGLPGIKGEKGAIGLPGPDIFIDVDGAVISGYPGDPGVPG 418

Query: 155 -----GDEGKRGPKGDMGYPG-P-----QGIPGDEGKRGPKGDMGYPGR-----IGLDGR 198
                GDEG +GP+G  G PG P     QGI G +G  G KGD G PGR      GL GR
Sbjct: 419 LPGLKGDEGIQGPRGPSGIPGLPSLPGIQGILGPQGSPGLKGDQGNPGRTTVGAAGLPGR 478

Query: 199 D--------------------------------GLPGEPGLDGIPGRNGMD--------- 217
           D                                GL GE GL G PG  G+          
Sbjct: 479 DGLPGLPGPQGPPGPPGPSFGTGTLHRAEPGFPGLRGEQGLKGNPGLKGVKGDPGFCACD 538

Query: 218 ------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                 G PG+ G  G  G+ G  G  G +G  G RG +G +G  G  G P     K E
Sbjct: 539 GGVLDIGPPGEPGQRGPQGLMGPPGVQGTRGDPGSRGTQGPAGAPGSHGPPGPAGSKGE 597



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 90/197 (45%), Gaps = 50/197 (25%)

Query: 111  PPGLQGPIGQKGE----IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            P GL G  G+KG     IGA G+ G++G++G +G PG+ GP    G+PG  G   P    
Sbjct: 1252 PAGLPGAKGEKGTPGIGIGAPGKPGIRGQKGGQGFPGLQGP---AGLPGAPGISLPSLIA 1308

Query: 167  GYPGPQGIPGDEGK------------------RGPKGDMGYP---------GRIGLDGRD 199
            G PG  G PG +G+                  +G  GD G+P         G +G+ G  
Sbjct: 1309 GQPGDPGRPGLDGERGRPGPQGPPGPPGPSADQGDSGDPGFPGIPGPRGPKGDLGIPGFS 1368

Query: 200  GLPGEPGLDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTNGE----KGM 243
            GLPGE GL G+ G  G  GIPGK             G  G  G PG  G  G+    + +
Sbjct: 1369 GLPGELGLKGMRGEPGFMGIPGKVGPPGDPGFPGMKGKAGSRGFPGPQGAPGQTPIAEAI 1428

Query: 244  TGPRGNRGKSGINGVPG 260
              P G  G  GI+G+PG
Sbjct: 1429 QVPPGPLGLPGIDGIPG 1445



 Score = 46.6 bits (109), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 98/232 (42%), Gaps = 59/232 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG------APGVVGPPGPQGIPGD------EGK 159
           PGL GP G  G  G +G  G +G++G  G       PG+ G  G  G+PG       +G 
Sbjct: 346 PGLPGPRGPMGSEGVQGPAGKQGKKGTSGFPGLNGLPGIKGEKGAIGLPGPDIFIDVDGA 405

Query: 160 --RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
              G  GD G PG  G+ GDEG +GP+G  G P         GLP  PG+ GI G  G  
Sbjct: 406 VISGYPGDPGVPGLPGLKGDEGIQGPRGPSGIP---------GLPSLPGIQGILGPQGSP 456

Query: 218 GIPGKDGLPGK-----DGIPGTN-------------------GTN-------GEKGMTGP 246
           G+ G  G PG+      G+PG +                   GT        G  G+ G 
Sbjct: 457 GLKGDQGNPGRTTVGAAGLPGRDGLPGLPGPQGPPGPPGPSFGTGTLHRAEPGFPGLRGE 516

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ-----LLIPPTIVGSE 293
           +G +G  G+ GV G P  CA       + P  E  Q     L+ PP + G+ 
Sbjct: 517 QGLKGNPGLKGVKGDPGFCACDGGVLDIGPPGEPGQRGPQGLMGPPGVQGTR 568



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 64/136 (47%), Gaps = 17/136 (12%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKR 181
            G+ G  G+ G RG+ G PG  G PG  G  G  G  GPKG  G PG  G+   PG     
Sbjct: 1180 GSPGLPGIAGVRGDPGLPGFSGHPGVAGPLGSSGLVGPKGSPGLPGLHGLNGLPGT---- 1235

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-GLPGKDGIPGTNGTNGE 240
              KG  G PG         + G PG  G+PG  G  G PG   G PGK GI G  G  G 
Sbjct: 1236 --KGTHGTPGPS-------ITGVPGPAGLPGAKGEKGTPGIGIGAPGKPGIRGQKGGQGF 1286

Query: 241  KGMTGPRGNRGKSGIN 256
             G+ GP G  G  GI+
Sbjct: 1287 PGLQGPAGLPGAPGIS 1302



 Score = 39.7 bits (91), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 65/141 (46%), Gaps = 29/141 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPG-------------- 155
           G+QGP G +G  G  G  G+KGERG  G  G  GP    GP G+PG              
Sbjct: 109 GIQGPTGPQGFTGPTGLSGLKGERGSPGPLGPYGPTGDKGPMGVPGFLGINGIPGHPGQP 168

Query: 156 -------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD-----GRDGLPG 203
                   +G  G +G +G+PGP G PG  G  G  G  GY G   +D     G  G PG
Sbjct: 169 GPRGPPGLDGCNGTQGAVGFPGPDGFPGLLGPPGLPGQKGYKGEPAIDPGSFKGMKGNPG 228

Query: 204 EPGLDGIPGRNGMDGIPGKDG 224
            PGLDGI G  G  G PG  G
Sbjct: 229 LPGLDGITGPQGAPGSPGAAG 249


>gi|345779496|ref|XP_539177.3| PREDICTED: collagen alpha-1(XXII) chain [Canis lupus familiaris]
          Length = 1612

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/139 (48%), Positives = 74/139 (53%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G +G  G KG MG  G  G +G PG +GPPG +G PG +G  GP G  G  G 
Sbjct: 1249 PGLPGLEGARGPPGFKGHMGDSGAPGPRGEPGAMGPPGREGSPGKDGDTGPTGPQGPQGL 1308

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            +G PG  G  G  GD G  G  G  G  G  G PGL G  G  G  G PG  G PGK+GI
Sbjct: 1309 RGPPGKNGSPGSPGDPGPAGSPGQKGNKGDHGSPGLPGFLGPRGPQGEPGDKGAPGKEGI 1368

Query: 232  PGTNGTNGEKGMTGPRGNR 250
            PG  G  G KG  G  GNR
Sbjct: 1369 PGKPGEPGPKGDRGDPGNR 1387



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 96/231 (41%), Gaps = 88/231 (38%)

Query: 112 PGLQGPIGQKGEIGAKG------------EMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           PGL GP GQ G+ G  G            E G+ G  GEKGA G+ G PG  G+ G++G+
Sbjct: 767 PGLPGPKGQPGDRGEDGLPGKPGLRGEVGEQGLAGRPGEKGAAGLPGAPGFPGVRGEKGE 826

Query: 160 RGPKGDMGYPGPQGIPGDEGK-------------------------RGPKGDMGYPGRIG 194
           +G KG +G PG +G PG++G+                         +GPKG+ G PG   
Sbjct: 827 QGEKGGLGLPGVKGDPGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPG--- 883

Query: 195 LDGRDGLPGEPGLDGIP---------------GRNGMDGIPGKDGLPG------------ 227
                 +PGEPGL G P               G+ G  G PG  G PG            
Sbjct: 884 ------VPGEPGLQGHPGELGPRGPTGAPGAKGQEGPRGAPGSTGNPGAPGTVGPPGASG 937

Query: 228 ---------------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                          KDG  G  G  GE+G  GP G RG  G  G+PGTP 
Sbjct: 938 PPGSVGPPGIRGPPGKDGERGEKGATGEEGSPGPAGPRGDPGAPGLPGTPG 988



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 79/171 (46%), Gaps = 42/171 (24%)

Query: 111 PPGLQGPIGQKGEIGAKG---------------------EMGVKGERGEKGAPGVVGPPG 149
           PPGLQG  G+KGE+G  G                       G  G  GE G PG  G PG
Sbjct: 694 PPGLQGLRGKKGEVGPPGTPGLLGPQGPPGPPGIPGPPGPGGPPGLPGEIGFPGKPGHPG 753

Query: 150 PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
           P G PG +G+    G  G PGP+G PGD G+                  DGLPG+PGL G
Sbjct: 754 PTGTPGKDGQ---DGAPGLPGPKGQPGDRGE------------------DGLPGKPGLRG 792

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+ G PG+ G  G  G PG  G  GEKG  G +G  G  G+ G PG
Sbjct: 793 EVGEQGLAGRPGEKGAAGLPGAPGFPGVRGEKGEQGEKGGLGLPGVKGDPG 843



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 100/238 (42%), Gaps = 82/238 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEG---------- 158
           PGLQG  G+KG  G KGE G+ G   +RGE G  G  GPPG  G+ G +G          
Sbjct: 592 PGLQGERGEKGARGEKGERGLDGFPGKRGETGEQGRPGPPGVAGLQGQKGDVGPAGPPGV 651

Query: 159 ------KRGPKGDMGY---------------------------PGPQGIPGDEGKRGPKG 185
                 + G KG+ G                            PG QG+ G +G+ GP G
Sbjct: 652 PGSVVQREGLKGEQGAPGPRGHQGPPGPPGAPGLMGPEGKDGPPGLQGLRGKKGEVGPPG 711

Query: 186 ------------------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
                                         ++G+PG+ G  G  G PG+ G DG PG  G
Sbjct: 712 TPGLLGPQGPPGPPGIPGPPGPGGPPGLPGEIGFPGKPGHPGPTGTPGKDGQDGAPGLPG 771

Query: 216 MDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G P   G+DGLPGK   PG  G  GE+G+ G  G +G +G+ G PG P +   K E
Sbjct: 772 PKGQPGDRGEDGLPGK---PGLRGEVGEQGLAGRPGEKGAAGLPGAPGFPGVRGEKGE 826



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 96/223 (43%), Gaps = 75/223 (33%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGA------------------------PGVVGPPG 149
            + GP G KGE GA GE+G KG++G  G                         PG+ GP G
Sbjct: 1149 IAGPQGSKGERGADGEIGQKGDQGHPGVPGFMGPPGNPGPRGADGIAGAAGPPGIQGPQG 1208

Query: 150  PQG------------IPGDEGKRG---------PKGDMGYPGPQGIPGDEGKRGP---KG 185
             +G            IPG+EGK G           G MG PG   +PG EG RGP   KG
Sbjct: 1209 KEGPPGPQGPFGLPGIPGEEGKEGRDGKPGPPGEPGKMGEPG---LPGLEGARGPPGFKG 1265

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRN------------GMDGIPGKDGLPGKDGIPG 233
             MG  G  G  G  G  G PG +G PG++            G+ G PGK+G PG  G PG
Sbjct: 1266 HMGDSGAPGPRGEPGAMGPPGREGSPGKDGDTGPTGPQGPQGLRGPPGKNGSPGSPGDPG 1325

Query: 234  TNGTNGEK------------GMTGPRGNRGKSGINGVPGTPAI 264
              G+ G+K            G  GPRG +G+ G  G PG   I
Sbjct: 1326 PAGSPGQKGNKGDHGSPGLPGFLGPRGPQGEPGDKGAPGKEGI 1368



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 66/129 (51%), Gaps = 21/129 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKG 164
            PPG +G +G  G  G +GE G  G  G +G+PG        GP GPQG+ G  GK G  G
Sbjct: 1260 PPGFKGHMGDSGAPGPRGEPGAMGPPGREGSPGKDGDTGPTGPQGPQGLRGPPGKNGSPG 1319

Query: 165  DMGYPGPQGIPGDEGKRG------------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
              G PGP G PG +G +G            P+G  G PG  G  G++G+PG+PG    PG
Sbjct: 1320 SPGDPGPAGSPGQKGNKGDHGSPGLPGFLGPRGPQGEPGDKGAPGKEGIPGKPGE---PG 1376

Query: 213  RNGMDGIPG 221
              G  G PG
Sbjct: 1377 PKGDRGDPG 1385



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 88/211 (41%), Gaps = 66/211 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QGP G+KG+ G  GE G++G       PG +GP GP G PG +G+ GP+G  G  G 
Sbjct: 870  PGEQGPKGEKGDPGVPGEPGLQGH------PGELGPRGPTGAPGAKGQEGPRGAPGSTGN 923

Query: 172  QGIPG------------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             G PG                         +G+RG KG  G  G  G  G  G PG PGL
Sbjct: 924  PGAPGTVGPPGASGPPGSVGPPGIRGPPGKDGERGEKGATGEEGSPGPAGPRGDPGAPGL 983

Query: 208  DGIPGRNGMDG---------------IPGKDGLPGKDGIPGTNGTNG------------- 239
             G PG+ G DG               I G  G PG  G PG  G  G             
Sbjct: 984  PGTPGQ-GKDGEPGLRGPPGSPGPLGIKGDRGAPGIPGSPGNRGDPGIGVAGPPGPSGPP 1042

Query: 240  -------EKGMTGPRGNRGKSGINGVPGTPA 263
                    +G+ G  G +G +G +GVPG P 
Sbjct: 1043 GDKGPPGSRGLPGFPGPQGPAGQDGVPGNPG 1073



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 83/207 (40%), Gaps = 76/207 (36%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  G++GERGEKGA G  G  G  G P   GKRG  G+ G PGP G+ G +G+   KGD+
Sbjct: 590 GAPGLQGERGEKGARGEKGERGLDGFP---GKRGETGEQGRPGPPGVAGLQGQ---KGDV 643

Query: 188 GYPG----------RIGLDGRDGLP------------------------GEPGLDGIPGR 213
           G  G          R GL G  G P                        G PGL G+ G+
Sbjct: 644 GPAGPPGVPGSVVQREGLKGEQGAPGPRGHQGPPGPPGAPGLMGPEGKDGPPGLQGLRGK 703

Query: 214 NGMDGIPG------------------------------------KDGLPGKDGIPGTNGT 237
            G  G PG                                    K G PG  G PG +G 
Sbjct: 704 KGEVGPPGTPGLLGPQGPPGPPGIPGPPGPGGPPGLPGEIGFPGKPGHPGPTGTPGKDGQ 763

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAI 264
           +G  G+ GP+G  G  G +G+PG P +
Sbjct: 764 DGAPGLPGPKGQPGDRGEDGLPGKPGL 790



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 89/227 (39%), Gaps = 95/227 (41%)

Query: 117 PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK-------RGPKGDM--- 166
           P G+KGE G+ G +G+ G +G+ GA G++G PGP+G  GD G+       +G KG +   
Sbjct: 485 PAGEKGEKGSDGPVGLPGPKGDMGATGLLGAPGPKGEKGDMGRGPFFPGEKGEKGSLGPP 544

Query: 167 ---------------------------------------------GYPGPQGIPGDEGKR 181
                                                        G PG QG  G++G R
Sbjct: 545 GPPGRDGSKGMRGEPGEPGEPGLPGEVGMRGFQGPPGLPGPPGHVGAPGLQGERGEKGAR 604

Query: 182 GPKGDM---GYPGRIGLDGRDGLPGEPGLDGIPGRNG----------------MDGIPGK 222
           G KG+    G+PG+ G  G  G PG PG+ G+ G+ G                 +G+ G+
Sbjct: 605 GEKGERGLDGFPGKRGETGEQGRPGPPGVAGLQGQKGDVGPAGPPGVPGSVVQREGLKGE 664

Query: 223 DGLP---------------------GKDGIPGTNGTNGEKGMTGPRG 248
            G P                     GKDG PG  G  G+KG  GP G
Sbjct: 665 QGAPGPRGHQGPPGPPGAPGLMGPEGKDGPPGLQGLRGKKGEVGPPG 711



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 88/210 (41%), Gaps = 75/210 (35%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------KGDMGYP 169
            G+KG  G +G  G  G RG+ GAPG+ G PG QG  G+ G RGP         KGD G P
Sbjct: 958  GEKGATGEEGSPGPAGPRGDPGAPGLPGTPG-QGKDGEPGLRGPPGSPGPLGIKGDRGAP 1016

Query: 170  GPQGIPGDEGKRG--------------------PKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            G  G PG+ G  G                     +G  G+PG  G  G+DG+PG PG  G
Sbjct: 1017 GIPGSPGNRGDPGIGVAGPPGPSGPPGDKGPPGSRGLPGFPGPQGPAGQDGVPGNPGERG 1076

Query: 210  IPGRNGMDGI------------------------------PGKDGLPGKDGIPGTNGTNG 239
             PG+ G   +                               G  GLPGK   PG  GT G
Sbjct: 1077 PPGKPGPSSLLSPGDINLLVKDVCNDCPPGPPGLPGLPGFKGDKGLPGK---PGREGTEG 1133

Query: 240  EKG------------MTGPRGNRGKSGING 257
            +KG            + GP+G++G+ G +G
Sbjct: 1134 KKGDAGPRGLPGPPGIAGPQGSKGERGADG 1163


>gi|109939862|gb|AAI18145.1| COL27A1 protein [Bos taurus]
          Length = 608

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 92/167 (55%), Gaps = 16/167 (9%)

Query: 133 KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G+EG +G +G  G 
Sbjct: 102 RGDRGEPGDPGYPGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGA 161

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
           PGR G+ G  GLPG     G+ GR G +G+ G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 162 PGRRGIQGLQGLPGP---RGVVGRQGPEGVAGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 218

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
            G RG  G+ G+PG      +K ES   LP       + PP   G+E
Sbjct: 219 AGKRGDPGVAGLPGAQGPPGFKGESG--LPGQ-----MGPPGKRGTE 258



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 94/197 (47%), Gaps = 30/197 (15%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            +QG   +  +   PG  GP G+ G  G+KGE G KG++G+ GAPG  G  G QG+PG  
Sbjct: 118 GVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPGRRGIQGLQGLPGPR 177

Query: 158 GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G  G +G  G  GP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 178 GVVGRQGPEGVAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGDPGVAGLPGAQGPP 237

Query: 203 GEPGLDGIPGR---------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT------GPR 247
           G  G  G+PG+          G  G+PG  G PG  G PG +G  G  GM       GP+
Sbjct: 238 GFKGESGLPGQMGPPGKRGTEGGMGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPQ 297

Query: 248 GNRGKSGINGVPGTPAI 264
           G+ G  GI G  G P +
Sbjct: 298 GDVGFKGIQGPRGPPGL 314



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 81/143 (56%), Gaps = 12/143 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G++G+ G  G  G +G    +GE G PG +GPPG         KRG +G MG 
Sbjct: 213 PGPMGPAGKRGDPGVAGLPGAQGPPGFKGESGLPGQMGPPG---------KRGTEGGMGL 263

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG QG PG +G+ G  G+MG+PG  GL G  G  G+ G  GI G  G  G+ GK+G+ G 
Sbjct: 264 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPQGDVGFKGIQGPRGPPGLMGKEGIIGP 323

Query: 229 DGIPGTNGTNGEKGMTGPRGNRG 251
            GI G +G  G KG  G RG+ G
Sbjct: 324 LGILGPSGRQGPKGDKGSRGDLG 346



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 82/151 (54%), Gaps = 12/151 (7%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G +G  G  G++G+ G PG  G PGP+G  G+EG +G +G  G PG +GI G +G  
Sbjct: 115 GQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPGRRGIQGLQGLP 174

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGL---------DGIP---GRNGMDGIPGKDGLPGKD 229
           GP+G +G  G  G+ G DGLPG  G          DG P   G  G  G PG  GLPG  
Sbjct: 175 GPRGVVGRQGPEGVAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGDPGVAGLPGAQ 234

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 235 GPPGFKGESGLPGQMGPPGKRGTEGGMGLPG 265



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 55/100 (55%), Gaps = 12/100 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVV---GPPGPQ---GIPGDEG 158
           +  PPG +G  G  G  G +GE G KG+    GE G PG+    GP GPQ   G  G +G
Sbjct: 248 QMGPPGKRGTEGGMGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPQGDVGFKGIQG 307

Query: 159 KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
            RGP G MG     GP GI G  G++GPKGD G  G +GL
Sbjct: 308 PRGPPGLMGKEGIIGPLGILGPSGRQGPKGDKGSRGDLGL 347


>gi|21745458|gb|AAM77398.1|AF525468_1 fibrillar collagen precursor [Hydra vulgaris]
          Length = 1412

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 92/173 (53%), Gaps = 6/173 (3%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G    T +   PG +GP+G  G +G  G+ G +G  G+ G PG  G  G +GIPG +G 
Sbjct: 437 RGEPGRTGQMGIPGARGPVGDPGPVGLDGKEGERGIPGKDGLPGPPGQAGLRGIPGLQGA 496

Query: 160 RGPKGDMGYPGPQG------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G KGD G+ G +G       PGD+G+ G  GD G PG  G  G  G PGE G  G  G 
Sbjct: 497 TGEKGDKGFKGNKGEIGFDGAPGDKGETGDVGDQGAPGLPGKQGEAGEPGEQGNRGAQGF 556

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G+ G PG  G  GK G PGT G+ G  G+ G  G RG SG  G PG+P +  
Sbjct: 557 VGLPGAPGPQGRQGKRGTPGTPGSRGADGLPGRPGERGYSGEQGTPGSPGVIG 609



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 89/165 (53%), Gaps = 9/165 (5%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
               +G    +    P G++GP G +G  G +G  G+ GE G+ G  G VG PG +G PG
Sbjct: 226 AAGPEGLMGPSGPTGPDGVKGPQGPRGSDGQQGTAGLAGESGDPGPSGPVGQPGQRGEPG 285

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G RG  GD G  GPQG+   +G  GP GD G PG +GL    G PG  G  G PG+ G
Sbjct: 286 YPGIRGDSGDRGDTGPQGL---DGLDGPPGDRGLPGPVGL---PGAPGPVGERGEPGKQG 339

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+ G  G  GIPG  G  G+K   GPRG +G+ G+ G PG
Sbjct: 340 PRGFPGQQGEQGSPGIPGVVGEAGDK---GPRGLQGQVGVAGPPG 381



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 92/176 (52%), Gaps = 12/176 (6%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQK---GEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGI 153
           QG   S      PG++G IG+K   G IG KG  G  G  G+ G PG  GP   PGP G+
Sbjct: 404 QGLPGSPGLPGLPGIKGHIGEKGFTGPIGEKGNRGEPGRTGQMGIPGARGPVGDPGPVGL 463

Query: 154 PGDEGKRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            G EG+RG  G  G PGP      +GIPG +G  G KGD G+ G  G  G DG PG+ G 
Sbjct: 464 DGKEGERGIPGKDGLPGPPGQAGLRGIPGLQGATGEKGDKGFKGNKGEIGFDGAPGDKGE 523

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G  G+PGK G  G+ G  G  G  G  G+ G  G +G+ G  G PGTP 
Sbjct: 524 TGDVGDQGAPGLPGKQGEAGEPGEQGNRGAQGFVGLPGAPGPQGRQGKRGTPGTPG 579



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 103/210 (49%), Gaps = 29/210 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYP 169
           G++G +G+ G  GAKG++G  GE GE G PG+    G  GP G  G +G  GP+G MG  
Sbjct: 177 GVKGELGEPGPKGAKGDVGQNGEAGENGLPGIKGDTGARGPNGTIGFQGAAGPEGLMGPS 236

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------------GEPGLDGI------- 210
           GP G  G +G +GP+G  G  G  GL G  G P            GEPG  GI       
Sbjct: 237 GPTGPDGVKGPQGPRGSDGQQGTAGLAGESGDPGPSGPVGQPGQRGEPGYPGIRGDSGDR 296

Query: 211 -----PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                 G +G+DG PG  GLPG  G+PG  G  GE+G  G +G RG  G  G  G+P I 
Sbjct: 297 GDTGPQGLDGLDGPPGDRGLPGPVGLPGAPGPVGERGEPGKQGPRGFPGQQGEQGSPGIP 356

Query: 266 AYKRESCSLLPNSETSQLLI--PPTIVGSE 293
               E+    P     Q+ +  PP   GS+
Sbjct: 357 GVVGEAGDKGPRGLQGQVGVAGPPGESGSD 386



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 88/158 (55%), Gaps = 9/158 (5%)

Query: 112 PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGLQG  G+KG+ G    KGE+G  G  G+KG  G VG  G  G+PG +G+ G  G+ G 
Sbjct: 491 PGLQGATGEKGDKGFKGNKGEIGFDGAPGDKGETGDVGDQGAPGLPGKQGEAGEPGEQGN 550

Query: 169 PGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G Q   G+PG  G +G +G  G PG  G  G DGLPG PG  G  G  G  G PG  G 
Sbjct: 551 RGAQGFVGLPGAPGPQGRQGKRGTPGTPGSRGADGLPGRPGERGYSGEQGTPGSPGVIGE 610

Query: 226 PGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPG 260
           PG+ G PG  G  G +   GM G  G+ G+ G+ G+PG
Sbjct: 611 PGRKGPPGKQGHKGAQGDIGMPGEAGSPGEIGVAGIPG 648



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 96/200 (48%), Gaps = 36/200 (18%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGVV 145
             QG      E   PG  GP+GQ G+ G  G  G++G+ G++G             PG  
Sbjct: 255 GQQGTAGLAGESGDPGPSGPVGQPGQRGEPGYPGIRGDSGDRGDTGPQGLDGLDGPPGDR 314

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G PGP G+PG  G  G +G+ G  GP+G PG +G++G  G  G  G  G  G  GL G+ 
Sbjct: 315 GLPGPVGLPGAPGPVGERGEPGKQGPRGFPGQQGEQGSPGIPGVVGEAGDKGPRGLQGQV 374

Query: 206 GLDGIPGRNGMD------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGP- 246
           G+ G PG +G D                  G+PG  GLPG   +PG  G  GEKG TGP 
Sbjct: 375 GVAGPPGESGSDGRPGPPGPNGAPGQRGNQGLPGSPGLPG---LPGIKGHIGEKGFTGPI 431

Query: 247 --RGNRGKSGINGVPGTPAI 264
             +GNRG+ G  G  G P  
Sbjct: 432 GEKGNRGEPGRTGQMGIPGA 451



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 93/187 (49%), Gaps = 24/187 (12%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      E   PG QG  G +G +G  G  G +G +G++G PG  G  G  G+PG  G+R
Sbjct: 534 GLPGKQGEAGEPGEQGNRGAQGFVGLPGAPGPQGRQGKRGTPGTPGSRGADGLPGRPGER 593

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G+ G PG  G+ G+ G++GP G  G+ G    IG+ G  G PGE G+ GIPG  G  
Sbjct: 594 GYSGEQGTPGSPGVIGEPGRKGPPGKQGHKGAQGDIGMPGEAGSPGEIGVAGIPGPQGNP 653

Query: 218 GIPGKDGLPG---------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G+PG +G  G                     K G+PG  G  G+ G++G  G  G+ G+ 
Sbjct: 654 GLPGDEGEIGEAGDRGRDGQPGGRGAPGPRGKPGLPGNPGLRGDTGVSGEDGKPGEIGVP 713

Query: 257 GVPGTPA 263
           G PG P 
Sbjct: 714 GAPGNPG 720



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 84/164 (51%), Gaps = 6/164 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
           GL GP GQ G  G  G  G  GE+G+KG  G  G  G  G PGD+G+ G  GD G PG  
Sbjct: 477 GLPGPPGQAGLRGIPGLQGATGEKGDKGFKGNKGEIGFDGAPGDKGETGDVGDQGAPGLP 536

Query: 171 ----PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                 G PG++G RG +G +G PG  G  GR G  G PG  G  G +G+ G PG+ G  
Sbjct: 537 GKQGEAGEPGEQGNRGAQGFVGLPGAPGPQGRQGKRGTPGTPGSRGADGLPGRPGERGYS 596

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G+ G PG+ G  GE G  GP G +G  G  G  G P       E
Sbjct: 597 GEQGTPGSPGVIGEPGRKGPPGKQGHKGAQGDIGMPGEAGSPGE 640



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 97/192 (50%), Gaps = 42/192 (21%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVG------P 147
           + + G   +  +   PG QGP+G+ G  G +G++G    KG RG +G PG +G       
Sbjct: 710 IGVPGAPGNPGDIGQPGSQGPMGKPGNPGMQGDVGPKGFKGARGPRGRPGKIGQIGEIGK 769

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
            G  G  GD+G  G +G +G PG QG+PG                +GK GPKGD G   R
Sbjct: 770 KGESGEKGDQGLPGLQGAIGIPGNQGLPGLAGSAGEQGPQGPPGPDGKLGPKGDKG---R 826

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DGR G PG PG DGI   NG++G PGKD            G+ G +G  GPRG +G 
Sbjct: 827 SGPDGRPGSPGRPGPDGI---NGVNGQPGKD------------GSRGPQGHQGPRGKQGN 871

Query: 253 SGINGVPGTPAI 264
            G  G+PGT  +
Sbjct: 872 IGPIGLPGTSGM 883



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 92/190 (48%), Gaps = 33/190 (17%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG---------EMGVKGERGEKGAPGVVGPP 148
             QGF        P G QG  G  G  G++G         E G  GE+G  G+PGV+G P
Sbjct: 552 GAQGFVGLPGAPGPQGRQGKRGTPGTPGSRGADGLPGRPGERGYSGEQGTPGSPGVIGEP 611

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYP------GRIGLDGRD 199
           G +G PG +G +G +GD+G PG  G PG+    G  GP+G+ G P      G  G  GRD
Sbjct: 612 GRKGPPGKQGHKGAQGDIGMPGEAGSPGEIGVAGIPGPQGNPGLPGDEGEIGEAGDRGRD 671

Query: 200 ---------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                          GLPG PGL G  G +G DG PG+ G+PG  G PG  G  G +G  
Sbjct: 672 GQPGGRGAPGPRGKPGLPGNPGLRGDTGVSGEDGKPGEIGVPGAPGNPGDIGQPGSQGPM 731

Query: 245 GPRGNRGKSG 254
           G  GN G  G
Sbjct: 732 GKPGNPGMQG 741



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 99/200 (49%), Gaps = 54/200 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGP--- 162
           PG  GP+G++GE G +G  G  G++GE+G+PG+       G  GP+G+ G  G  GP   
Sbjct: 323 PGAPGPVGERGEPGKQGPRGFPGQQGEQGSPGIPGVVGEAGDKGPRGLQGQVGVAGPPGE 382

Query: 163 ------------------KGDMGYPGPQGIPG---------DEGKRGP---KGDMGYPGR 192
                             +G+ G PG  G+PG         ++G  GP   KG+ G PGR
Sbjct: 383 SGSDGRPGPPGPNGAPGQRGNQGLPGSPGLPGLPGIKGHIGEKGFTGPIGEKGNRGEPGR 442

Query: 193 IGLDGRDGL------PGEPGLDGIPGRNGMDGIPGKDGLPGK------DGIPGTNGTNGE 240
            G  G  G       PG  GLD   G+ G  GIPGKDGLPG        GIPG  G  GE
Sbjct: 443 TGQMGIPGARGPVGDPGPVGLD---GKEGERGIPGKDGLPGPPGQAGLRGIPGLQGATGE 499

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  G +GN+G+ G +G PG
Sbjct: 500 KGDKGFKGNKGEIGFDGAPG 519



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 98/221 (44%), Gaps = 42/221 (19%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG- 155
           V  +GF  +     P G  G IGQ GEIG KGE G KG++G  G  G +G PG QG+PG 
Sbjct: 743 VGPKGFKGA---RGPRGRPGKIGQIGEIGKKGESGEKGDQGLPGLQGAIGIPGNQGLPGL 799

Query: 156 --------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                          +GK GPKGD G  GP G PG  G+ GP G  G  G+ G DG  G 
Sbjct: 800 AGSAGEQGPQGPPGPDGKLGPKGDKGRSGPDGRPGSPGRPGPDGINGVNGQPGKDGSRGP 859

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------------------GM 243
            G  G  G  G  G  G+PG  G+P   G+PG  G  G+                   G 
Sbjct: 860 QGHQGPRGKQGNIGPIGLPGTSGMP---GLPGPRGPTGDNGADGSDGSDGDIGDDGQVGS 916

Query: 244 TGPRGNRGKSGINGVP---GTPAICAYKRESCSLLPNSETS 281
            GP+G  G  G NG P   G P +   + E     P+ +  
Sbjct: 917 QGPQGESGADGSNGAPGRNGNPGVPGPRGEKGEKGPSGDVG 957



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 86/170 (50%), Gaps = 24/170 (14%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGD 156
           QG   S      PG +GP G++G  GA+G++G+ GE G  G  GV G PGPQ   G+PGD
Sbjct: 599 QGTPGSPGVIGEPGRKGPPGKQGHKGAQGDIGMPGEAGSPGEIGVAGIPGPQGNPGLPGD 658

Query: 157 EGKRGPKGDMGYPGPQ------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           EG+ G  GD G  G              G+PG+ G R         G  G+ G DG PGE
Sbjct: 659 EGEIGEAGDRGRDGQPGGRGAPGPRGKPGLPGNPGLR---------GDTGVSGEDGKPGE 709

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G+ G PG  G  G PG  G  GK G PG  G  G KG  G RG RG+ G
Sbjct: 710 IGVPGAPGNPGDIGQPGSQGPMGKPGNPGMQGDVGPKGFKGARGPRGRPG 759



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 98/209 (46%), Gaps = 42/209 (20%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER-------------------- 136
           + M G   S  E    G+ GP G  G  G +GE+G  G+R                    
Sbjct: 629 IGMPGEAGSPGEIGVAGIPGPQGNPGLPGDEGEIGEAGDRGRDGQPGGRGAPGPRGKPGL 688

Query: 137 -------------GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD------ 177
                        GE G PG +G PG  G PGD G+ G +G MG PG  G+ GD      
Sbjct: 689 PGNPGLRGDTGVSGEDGKPGEIGVPGAPGNPGDIGQPGSQGPMGKPGNPGMQGDVGPKGF 748

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
           +G RGP+G  G  G+IG  G+ G  GE G  G+PG  G  GIPG  GLPG  G  G  G 
Sbjct: 749 KGARGPRGRPGKIGQIGEIGKKGESGEKGDQGLPGLQGAIGIPGNQGLPGLAGSAGEQGP 808

Query: 238 NGEK---GMTGPRGNRGKSGINGVPGTPA 263
            G     G  GP+G++G+SG +G PG+P 
Sbjct: 809 QGPPGPDGKLGPKGDKGRSGPDGRPGSPG 837



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 88/181 (48%), Gaps = 24/181 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGV---------KGERGEKGAPG 143
           +   +G         P GL+G     GQKGE G+KG MGV          G+RG KG  G
Sbjct: 121 ISGPRGLTGDPGNVGPKGLRGKDGREGQKGEPGSKGLMGVTGNPGPSGPPGQRGIKGVKG 180

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            +G PGP+G  GD G+ G  G+ G P   GI GD G RGP G +G+ G  G +       
Sbjct: 181 ELGEPGPKGAKGDVGQNGEAGENGLP---GIKGDTGARGPNGTIGFQGAAGPE------- 230

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             GL G  G  G DG+ G  G  G DG  GT G  GE G  GP G  G+ G  G PG P 
Sbjct: 231 --GLMGPSGPTGPDGVKGPQGPRGSDGQQGTAGLAGESGDPGPSGPVGQPGQRGEPGYPG 288

Query: 264 I 264
           I
Sbjct: 289 I 289



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/107 (49%), Positives = 64/107 (59%), Gaps = 6/107 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGP---KGD 165
            PG+ GP G+KGE G  G++GVKG +G     G PGV G  GP G PG +G++G    KGD
Sbjct: 938  PGVPGPRGEKGEKGPSGDVGVKGAKGNVGPAGEPGVRGDRGPSGEPGTDGEKGETGIKGD 997

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
             G PGP G  GD G  G +GD G  G +G  GR G  G  GL G+PG
Sbjct: 998  EGSPGPTGATGDRGDNGQRGDQGDTGYMGFKGRKGPTGPKGLKGMPG 1044



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 88/193 (45%), Gaps = 33/193 (17%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGD------------M 166
            G++G KG+ G  G  G  G+PG  GP G  G+   PG +G RGP+G             +
Sbjct: 816  GKLGPKGDKGRSGPDGRPGSPGRPGPDGINGVNGQPGKDGSRGPQGHQGPRGKQGNIGPI 875

Query: 167  GYPGPQGIPGDEGKRGPKGD------------MGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G PG  G+PG  G RGP GD            +G  G++G  G  G  G  G +G PGRN
Sbjct: 876  GLPGTSGMPGLPGPRGPTGDNGADGSDGSDGDIGDDGQVGSQGPQGESGADGSNGAPGRN 935

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------RGNRGKSGINGVPGTPAICAYK 268
            G  G+PG  G  G+ G  G  G  G KG  GP      RG+RG SG  G  G       K
Sbjct: 936  GNPGVPGPRGEKGEKGPSGDVGVKGAKGNVGPAGEPGVRGDRGPSGEPGTDGEKGETGIK 995

Query: 269  RESCSLLPNSETS 281
             +  S  P   T 
Sbjct: 996  GDEGSPGPTGATG 1008



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 85/190 (44%), Gaps = 33/190 (17%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S     P G+ G  GQ G+ G++G  G +G RG++G  G +G PG  G+PG  G R
Sbjct: 831  GRPGSPGRPGPDGINGVNGQPGKDGSRGPQGHQGPRGKQGNIGPIGLPGTSGMPGLPGPR 890

Query: 161  GPKGD---------------------------------MGYPGPQGIPGDEGKRGPKGDM 187
            GP GD                                  G PG  G PG  G RG KG+ 
Sbjct: 891  GPTGDNGADGSDGSDGDIGDDGQVGSQGPQGESGADGSNGAPGRNGNPGVPGPRGEKGEK 950

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G  G +G+ G  G  G  G  G+ G  G  G PG DG  G+ GI G  G+ G  G TG R
Sbjct: 951  GPSGDVGVKGAKGNVGPAGEPGVRGDRGPSGEPGTDGEKGETGIKGDEGSPGPTGATGDR 1010

Query: 248  GNRGKSGING 257
            G+ G+ G  G
Sbjct: 1011 GDNGQRGDQG 1020



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/133 (42%), Positives = 72/133 (54%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            ++G++G  G  G  G  GAPG  G PG  G  G++G++GP GD+G  G +G  G  G+ G
Sbjct: 913  QVGSQGPQGESGADGSNGAPGRNGNPGVPGPRGEKGEKGPSGDVGVKGAKGNVGPAGEPG 972

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             +GD G  G  G DG  G  G  G +G PG  G  G  G +G  G  G  G  G  G KG
Sbjct: 973  VRGDRGPSGEPGTDGEKGETGIKGDEGSPGPTGATGDRGDNGQRGDQGDTGYMGFKGRKG 1032

Query: 243  MTGPRGNRGKSGI 255
             TGP+G +G  GI
Sbjct: 1033 PTGPKGLKGMPGI 1045



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 86/211 (40%), Gaps = 71/211 (33%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
           G +G I  KGE GAKG++   GE G+ G  G+ G  G +G+ GDEGK G +GD       
Sbjct: 19  GGEGTIAPKGEKGAKGDV---GEPGDAGITGLAGDAGSRGLEGDEGKDGEEGDEGDIGPP 75

Query: 166 -------------------------------------------MGYPGPQGIPGDEGKRG 182
                                                       G  GP+G+ GD G  G
Sbjct: 76  GPPGVAGGNQTTVVVIYGPPGPPGNQGPIGPPGPKGFNGETGETGISGPRGLTGDPGNVG 135

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------------RNGMDGIPGKDGLPGKDG 230
           PKG  G       DGR+G  GEPG  G+ G            + G+ G+ G+ G PG  G
Sbjct: 136 PKGLRGK------DGREGQKGEPGSKGLMGVTGNPGPSGPPGQRGIKGVKGELGEPGPKG 189

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G NGE G  G  G +G +G  G  GT
Sbjct: 190 AKGDVGQNGEAGENGLPGIKGDTGARGPNGT 220


>gi|403266575|ref|XP_003925449.1| PREDICTED: collagen alpha-1(XXVII) chain [Saimiri boliviensis
            boliviensis]
          Length = 1856

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 89/175 (50%), Gaps = 30/175 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------------ 154
            G +GP G++G+ GA G  GV+G +G  G  GVVG  GP+GI                   
Sbjct: 1396 GAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGPEGIAGPDGLPGRDGQAGQQGEQ 1455

Query: 155  ---GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRDGLP--- 202
               GD G  GP G  G PG  G+PG +G  G KG+ G PG++      G +GR GLP   
Sbjct: 1456 GDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPHGKRGTEGRTGLPGNQ 1515

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G
Sbjct: 1516 GEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDTGFKGIQGPRGPPGLMGKEGIIG 1570



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/145 (45%), Positives = 83/145 (57%), Gaps = 9/145 (6%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G EG +G +G  G 
Sbjct: 1350 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGA 1409

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
            PGR G+ G  GLPG     G+ GR G +GI G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 1410 PGRRGVQGLQGLPGP---RGVVGRQGPEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 1466

Query: 247  RGNRGKSGINGVPGTPAICAYKRES 271
             G RG  G+ G+PG      +K ES
Sbjct: 1467 AGKRGNPGVAGLPGAQGPPGFKGES 1491



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 90/190 (47%), Gaps = 27/190 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +   PG  GP G+ G  G+KG  G KG++G+ GAPG  G  G QG+PG  
Sbjct: 1366 GVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPR 1425

Query: 158  GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G +G  G  GP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 1426 GVVGRQGPEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1485

Query: 203  GEPGLDGIPGR---------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNR 250
            G  G  G+PG+          G  G+PG  G PG  G PG +G  G  GM    GP+G  
Sbjct: 1486 GFKGESGLPGQLGPHGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPP 1545

Query: 251  GKSGINGVPG 260
            G +G  G+ G
Sbjct: 1546 GDTGFKGIQG 1555



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/126 (50%), Positives = 75/126 (59%), Gaps = 6/126 (4%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYPGPQGI 174
           K   GAKG+MG+ G  G  G PG  G    PGP G PG++G+ GP+G     GYPG QG+
Sbjct: 680 KAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGL 739

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G  GPKG  GY G  GL G  G  GE GL GIPG+ G  G+PG  G+ G+ G PG 
Sbjct: 740 PGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGKMGMPGFPGVFGERGPPGL 799

Query: 235 NGTNGE 240
           +G  GE
Sbjct: 800 DGNPGE 805



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 82/154 (53%), Gaps = 12/154 (7%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G+ G +G  G  G++G+ G PG  G PGP+G  G EG +G +G  G PG +G+ G +
Sbjct: 1360 GYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQ 1419

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGL---------DGIP---GRNGMDGIPGKDGLP 226
            G  GP+G +G  G  G+ G DGLPG  G          DG P   G  G  G PG  GLP
Sbjct: 1420 GLPGPRGVVGRQGPEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLP 1479

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1480 GAQGPPGFKGESGLPGQLGPHGKRGTEGRTGLPG 1513



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 94/189 (49%), Gaps = 42/189 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KG +G+ GE G+KG++GE+G PGV       G PG +G +G +G  G+PG +
Sbjct: 828  GYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGV------SGDPGFQGDKGSQGVPGFPGAR 881

Query: 173  GIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-- 215
            G PG  GK G KG               D+G PG    +G +G+ G+PG  G+PG  G  
Sbjct: 882  GKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGD---NGPEGMKGKPGARGLPGPRGQL 938

Query: 216  ----------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                            ++G PG+ G PG+ G+ G  G  G+ G  GP G +G  G  G+ 
Sbjct: 939  GPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGLMGFIGLV 998

Query: 260  GTPAICAYK 268
            G P I   K
Sbjct: 999  GEPGIVGEK 1007



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 79/143 (55%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG +GP          GKRG +G  G 
Sbjct: 1461 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGP---------HGKRGTEGRTGL 1511

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 1512 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDTGFKGIQGPRGPPGLMGKEGIIGP 1571

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1572 LGILGPSGLPGPKGDKGSRGDWG 1594



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 76/144 (52%), Gaps = 12/144 (8%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++G
Sbjct: 670 QKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQG 720

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  GIPG  G
Sbjct: 721 QPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRG 780

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G RG  G++G PG
Sbjct: 781 KMGMPGFPGVFGERGPPGLDGNPG 804



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  G  G  G +G+ G +G+PG  G PG QG+PG  G  GPKG  GY   
Sbjct: 698 PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGL 757

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN----------- 214
           PG  G+PG +G+RG  G  G  G++G+ G  G+ GE   PGLDG PG             
Sbjct: 758 PGLFGLPGSDGERGLPGIPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGL 817

Query: 215 -GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G PG  G+ G  G+ GE G+ G +G +G  G++G PG
Sbjct: 818 IGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 864



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 83/187 (44%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPK--------- 163
           GP G +G IG  G  G+ G  GE+G PG+ G  G  G+PG     G+RGP          
Sbjct: 747 GPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGKMGMPGFPGVFGERGPPGLDGNPGEL 806

Query: 164 ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                       GD+G  GP G PG +G +G  G +G PG  G  G  G+P   G+PG  
Sbjct: 807 GLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQ 866

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKS 253
           G  G  G+ G PG  G PG  G  G  G+                G  G  GP G +GK 
Sbjct: 867 GDKGSQGVPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 926

Query: 254 GINGVPG 260
           G  G+PG
Sbjct: 927 GARGLPG 933



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 84/190 (44%), Gaps = 54/190 (28%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---------------------------------- 138
            GL+G  G +G  G  G+ GV GERG                                   
Sbjct: 1077 GLKGSPGPQGRPGRPGQQGVAGERGHLGSRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPI 1136

Query: 139  --------KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                    KG PG VG P   G+PG+ G +G  G +G PG QG+ G  G+ G +GD G  
Sbjct: 1137 GPPGEMGPKGPPGAVGEP---GLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGP- 1192

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMT 244
              +G DG  G  G+PG DG  G  G +G+ G+DG PG        G  G +G  GEKG +
Sbjct: 1193 --MGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRS 1250

Query: 245  GPRGNRGKSG 254
            G +G +G  G
Sbjct: 1251 GAKGAKGYQG 1260



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 82/212 (38%), Gaps = 66/212 (31%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------------ 160
            G KG  G +G  G  GE+G +G   + G PGPQG PG  G++                  
Sbjct: 1056 GAKGRWGPRGPDGPAGEQGSRG---LKGSPGPQGRPGRPGQQGVAGERGHLGSRGFPGIP 1112

Query: 161  ------------------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                                          GPKG  G  G  G+PG+ G +G  G +G P
Sbjct: 1113 GPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEPGLPGEAGMKGDLGPLGTP 1172

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG-------- 242
            G  GL G+    GEPGL+G  G  G DG+ G  G PG DG  G  G  G  G        
Sbjct: 1173 GEQGLIGQR---GEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPP 1229

Query: 243  ----MTGPRGNRGKSGINGVPGTPAICAYKRE 270
                + GP G  GK G  G  G      Y+ +
Sbjct: 1230 GVTGVRGPEGKSGKQGEKGRSGAKGAKGYQGQ 1261



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 91/240 (37%), Gaps = 91/240 (37%)

Query: 112  PGLQGPIGQKGEIGAKGEM------GVKGERGEKGAPGVVGPPGPQGIPGD--------- 156
            PG QG IGQ+GE G +G+       G+KG+RG+ G  G  G  G +G+ G+         
Sbjct: 1172 PGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGV 1231

Query: 157  ------EGKRGPKGDMGYPGPQGIPGDEGK---------------------RGPKGDMGY 189
                  EGK G +G+ G  G +G  G +G+                     RG  G  G 
Sbjct: 1232 TGVRGPEGKSGKQGEKGRSGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGA 1291

Query: 190  PGRIGLDGRDGLPG---------------------------------------------- 203
            PGR+G  G  GL G                                              
Sbjct: 1292 PGRMGAQGEPGLAGYDGHKGLVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDPGPVGDRG 1351

Query: 204  ---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               EPG  G PG+ G+ G+ GK G  G+ G PG  G  G KG  G  G +GK G  G PG
Sbjct: 1352 DRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPG 1411



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 79/181 (43%), Gaps = 39/181 (21%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 1154 PGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGE 1213

Query: 169  PGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEP-------- 205
             G +G+ G+               EGK G +G+ G  G  G  G  G  GE         
Sbjct: 1214 KGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRSGAKGAKGYQGQLGEMGVPGDPGP 1273

Query: 206  -------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                         G  G PGR G  G PG  G  G  G+ G  G  G KG  G +G  GK
Sbjct: 1274 PGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGLVGPLGPPGPKGEKGEQGEDGK 1333

Query: 253  S 253
            +
Sbjct: 1334 A 1334



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 90/236 (38%), Gaps = 96/236 (40%)

Query: 112  PGLQGPIGQKGE---IGAKGEMGVKGERGE------------------------------ 138
            PG  GP+G++G    IG  GE G+ GE+G+                              
Sbjct: 980  PGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGMMGPPGAPGPKGSMGHPGMPGGMGTPGE 1039

Query: 139  ---------------KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
                           +GA G  GP GP G  G++G RG KG    PGPQG PG  G++G 
Sbjct: 1040 PGPQGPPGSRGPPGLRGAKGRWGPRGPDGPAGEQGSRGLKGS---PGPQGRPGRPGQQGV 1096

Query: 184  KGDMGYPGR------------------------------------IGLDGRDGLPGEPGL 207
             G+ G+ G                                     +G  G  G  GEPGL
Sbjct: 1097 AGERGHLGSRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEPGL 1156

Query: 208  DGIPGRNGMD------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
               PG  GM       G PG+ GL G+ G PG  G +G  G  G +G+RG  G +G
Sbjct: 1157 ---PGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDG 1209



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 47/87 (54%), Gaps = 12/87 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            PG QG  G KG+ G  GEMG          KG  G+ G  G+ GP GP G+ G EG  GP
Sbjct: 1512 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDTGFKGIQGPRGPPGLMGKEGIIGP 1571

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGY 189
               +G  GP G+PG +G +G +GD G 
Sbjct: 1572 ---LGILGPSGLPGPKGDKGSRGDWGL 1595



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 80/175 (45%), Gaps = 30/175 (17%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDMGYPGP 171
            +G KG  GA GE G+ GE G KG  G      P G PG++      G+ G +GD G  GP
Sbjct: 1142 MGPKGPPGAVGEPGLPGEAGMKGDLG------PLGTPGEQGLIGQRGEPGLEGDSGPMGP 1195

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+ GD G  GP G+ G  G+ GL G DG PG PG+ G+ G  G  G  G+ G  G  G 
Sbjct: 1196 DGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRSGAKGA 1255

Query: 232  PGTNGTNGE------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G  GE                  +G  GP G  G+ G  G PG      +K
Sbjct: 1256 KGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHK 1310



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 57/119 (47%), Gaps = 18/119 (15%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA------KGEMGVKGE---RGEKGAPGVVG 146
            L   QG      E   PG  GP G++G  G       +GE G KG+    GE G PG+ G
Sbjct: 1478 LPGAQGPPGFKGESGLPGQLGPHGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAG 1537

Query: 147  PPGPQGIPGD------EGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLD 196
              GP+G PGD      +G RGP G MG     GP GI G  G  GPKGD G  G  GL 
Sbjct: 1538 LFGPKGPPGDTGFKGIQGPRGPPGLMGKEGIIGPLGILGPSGLPGPKGDKGSRGDWGLQ 1596



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 68/171 (39%), Gaps = 54/171 (31%)

Query: 144 VVGPPGPQG------------------------------------------IPGDEGKRG 161
           ++GPPGP+G                                            GD G   
Sbjct: 619 LMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSP 678

Query: 162 PKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNG 215
            K   G  G  G+PG  G  GP   KG  GYPG  G  G  G P   G PG  G PGR G
Sbjct: 679 GKAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQG 738

Query: 216 MDGI---PGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G    PG  G  G  G+P   G  G++GE+G+ G  G RGK G+ G PG
Sbjct: 739 LPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGKMGMPGFPG 789



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 18/105 (17%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKG---------APGVVGPPGPQGIPGDEGKRG 161
            PPG  GP G KG+ GA+G  G +G+ G +G         APG+ G PG +G PG  G  G
Sbjct: 913  PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDG 972

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             KG+         PGD G+ GP G+ G  G IGL G  G+ GE G
Sbjct: 973  VKGE---------PGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKG 1008


>gi|148699170|gb|EDL31117.1| procollagen, type XXVII, alpha 1, isoform CRA_b [Mus musculus]
          Length = 1641

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 89/167 (53%), Gaps = 16/167 (9%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G+EG +G  G  G 
Sbjct: 1339 RGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGP 1398

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKGMTGP 246
             GR G  G  GLPG     G+ GR G +G  G DG+PG+DG P   G  G +G+ G  GP
Sbjct: 1399 SGRRGTQGLQGLPGP---RGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGP 1455

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
             G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 1456 AGRRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1495



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 85/169 (50%), Gaps = 18/169 (10%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G KG  GA GE G+ G+ G KG  G +GPPG QG+ G  G+ G +GD G  GP G+ GD
Sbjct: 1131 MGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGD 1190

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
             G  GP G+ G  G+ GL G DG PG PG+ G+PGR G  G  G+ G  G  G  G  G 
Sbjct: 1191 RGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGY 1250

Query: 238  NGE------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             GE                  +G  GP G  G+ G  G PG      +K
Sbjct: 1251 LGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHK 1299



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 97/203 (47%), Gaps = 23/203 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G  G  G KGE G KG PG  GP G +G  G +G  GP+G +G  GP
Sbjct: 1363 PGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGP 1422

Query: 172  QG------IPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            +G      IPG +G+ G +GD G    PG +G  GR G    PG+ G+PG  G  G  G+
Sbjct: 1423 EGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRG---NPGVAGLPGAQGPPGFKGE 1479

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
             GLPG+ G PG  GT G  G+    GN+G+ G  G PG      +   +    P      
Sbjct: 1480 SGLPGQLGPPGKRGTEGGTGLP---GNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGD 1536

Query: 283  LLI--------PPTIVGSEHIFS 297
            +          PP ++G E I  
Sbjct: 1537 IGFKGIQGPRGPPGLMGKEGIIG 1559



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 90/170 (52%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PG  G  G KG  GA G  G +G+ G +G+PG  G PG QG PG  G  GPKG  GY   
Sbjct: 687 PGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGL 746

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGK 222
           PG  G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG  G+ G PG 
Sbjct: 747 PGLFGLPGSDGER---GLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 803

Query: 223 DGL------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL            PG  G+ G  G  GE G+ G +G +G  G++G PG
Sbjct: 804 LGLIGDTGALGPIGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPG 853



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 82/158 (51%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G KGE G KG+ G  G  G +G  G+ G PGP+G+ G +G  G  G  G PG
Sbjct: 1374 PRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPG 1433

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              G PG +G +G  GD G  G  G  G  G+ G PG  G PG  G  G+PG+ G PGK G
Sbjct: 1434 RDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRG 1493

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
              G  G  G +G  G +G  G SG  G PG   +   K
Sbjct: 1494 TEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPK 1531



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 82/163 (50%), Gaps = 24/163 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+ G+ G  G+ GV+G RGE G  G  G PGP+G PG +G +G +G  G PG  G     
Sbjct: 1343 GEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAG---PS 1399

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------------- 219
            G+RG +G  G PG  G+ GR G  G  G DGIPGR+G  G                    
Sbjct: 1400 GRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRR 1459

Query: 220  --PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              PG  GLPG  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1460 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPG 1502



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 75/136 (55%), Gaps = 18/136 (13%)

Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GAKG MG+ G          +G KG PG  G PG QG PG EG  G K   GYPG QG P
Sbjct: 673 GAKGNMGLPGLSGNPGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAK---GYPGRQGFP 729

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G  GPKG  GY   IGL G  GLP   GE GL G+PG+ G  G PG  G  G+ G P
Sbjct: 730 GPVGDPGPKGSRGY---IGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPP 786

Query: 233 GTNGTNGEKGMTGPRG 248
           G +G  GE G+ GP G
Sbjct: 787 GLDGNPGEIGLPGPPG 802



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 85/157 (54%), Gaps = 14/157 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGD---EGKRGPKGD 165
            PG QG  G  G+ G  G  G +G  G  G PG  GPP   G  G+PG     GKRG +G 
Sbjct: 1438 PGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGG 1497

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G        G  GL
Sbjct: 1498 TGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPR------GPPGL 1551

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSG--INGVPG 260
             GK+GI G  G  G  G+ GP+G+RG  G  ++G PG
Sbjct: 1552 MGKEGIIGPPGMLGPSGLPGPKGDRGSRGDLVSGQPG 1588



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 89/178 (50%), Gaps = 30/178 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPKGDM 166
            G +GP G+ G+ G  G  G +G +G  G  GVVG  GP+      GIPG +G+ G +GD 
Sbjct: 1385 GEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQ 1444

Query: 167  ---------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                                 G PG QG PG +G+ G  G +G PG+ G +G  GLP   
Sbjct: 1445 GNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQ 1504

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G PG
Sbjct: 1505 GEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPG 1562



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 94/192 (48%), Gaps = 24/192 (12%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G    T    P G  GP G KG +G  GE G+KG++GE+G PGV G PG QG  G  G  
Sbjct: 805 GLIGDTGALGPIGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLP 864

Query: 161 GPKGDMGYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G  G  G PGP G  GD+G           G  GD+G PG  G +G  G PG  GL G P
Sbjct: 865 GLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPP 924

Query: 212 GRNG---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G+ G               ++G PG+ G PG+ G+ G+ G  G+ G  GP G +G  G  
Sbjct: 925 GQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFI 984

Query: 257 GVPGTPAICAYK 268
           G+ G P I   K
Sbjct: 985 GLVGEPGIVGEK 996



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 85/173 (49%), Gaps = 33/173 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEM------------GVKGERGE---------------KGAPGV 144
            PG QG  G++G  GAKG +            G+ GE G                KG PG 
Sbjct: 1080 PGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGA 1139

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            VG PG   +PGD G +G  G +G PG QG+ G  G+ G +GD G    +G DG  G  G+
Sbjct: 1140 VGEPG---LPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGP---VGPDGLKGDRGD 1193

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG DG  G  G +G+ G+DG PG  GI G  G  G+ G  G +G RG  G  G
Sbjct: 1194 PGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKG 1246



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 81/166 (48%), Gaps = 18/166 (10%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+ G        G +G  G PG+ G PGP G          KG  G+PG  G PG++G
Sbjct: 659 QKGDPGLSPGQAHDGAKGNMGLPGLSGNPGPLGR---------KGHKGHPGAAGHPGEQG 709

Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + GP+G     GYPGR G  G  G PG  G  G  G  G+ G+PG DG  G  G+PG  G
Sbjct: 710 QPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 769

Query: 237 TNGEKGMTGPRGNRGKSGIN------GVPGTPAICAYKRESCSLLP 276
             G  G  G  G RG  G++      G+PG P +     ++ +L P
Sbjct: 770 EMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGP 815



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 85/190 (44%), Gaps = 42/190 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKG------DM 166
           GP G +G IG  G  G+ G  GE+G PGV G  G  G    PGD G+RGP G      ++
Sbjct: 736 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEI 795

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PGP G+ G  G  G  G +GYPG  G+ G  G  GEPGL G  G  G+ G+ G  G  
Sbjct: 796 GLPGPPGVLGLIGDTGALGPIGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQ 855

Query: 227 GKDGI------------PGTNGTNGEKGM---------------------TGPRGNRGKS 253
           G  G             PG  G  G+KG                       GP G +GK 
Sbjct: 856 GDKGSHGLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 915

Query: 254 GINGVPGTPA 263
           G  G+PG P 
Sbjct: 916 GARGLPGPPG 925



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 94/255 (36%), Gaps = 82/255 (32%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+  +G      ++ P G  G  G +G+ G  GE G KG+ G KG  G  GPPG  G+PG
Sbjct: 1166 LIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPG 1225

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKGDMGYPGRIG 194
             EGK G +G+ G  G +G  G +G                      RG  G  G PGR+G
Sbjct: 1226 REGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMG 1285

Query: 195  LDGRDGL----------------------------------------------------P 202
              G  GL                                                    P
Sbjct: 1286 AQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEP 1345

Query: 203  GEPG---------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G+PG         L G PG+ G  G PG  G PG  G  G  G  G+ G  GP G RG  
Sbjct: 1346 GDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQ 1405

Query: 254  GINGVPGTPAICAYK 268
            G+ G+PG   +   +
Sbjct: 1406 GLQGLPGPRGVVGRQ 1420



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 86/187 (45%), Gaps = 39/187 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
            GL G  G KG  G +G  G  GE+G KG  G VGP G  G PG +G  G +G  G  G  
Sbjct: 1039 GLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFL 1098

Query: 171  ----------PQGIPGDEG------------KRGPKGDMGYPGRIGLDGRDGL------- 201
                       +G+PG+ G            + GPKG  G  G  GL G  G+       
Sbjct: 1099 GIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPL 1158

Query: 202  --PGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKS 253
              PGE GL    G PG  G  G  G DGL G  G PG +G +GEK   G+ G  G+ G  
Sbjct: 1159 GPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPP 1218

Query: 254  GINGVPG 260
            GI GVPG
Sbjct: 1219 GITGVPG 1225



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 92/235 (39%), Gaps = 85/235 (36%)

Query: 111  PPGLQGPIGQKGEIGAK---------------------GEMGVKGERGEKGAPGVVGPPG 149
            PPG QG IGQ+GE G +                     GE G KG+ G KG  G  GPPG
Sbjct: 1160 PPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPG 1219

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKGDMG 188
              G+PG EGK G +G+ G  G +G  G +G                      RG  G  G
Sbjct: 1220 ITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTG 1279

Query: 189  YPGRIGLDGRDGLPGEPGLDGI------------PGRNGMDGI----------------- 219
             PGR+G  G  GL G  G  GI             G  G DG                  
Sbjct: 1280 APGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDR 1339

Query: 220  -----PGKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPG 260
                 PG  G PG++G+ G  G  G+         +G  GP+G++G+ G  G PG
Sbjct: 1340 GDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPG 1394



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 85/181 (46%), Gaps = 30/181 (16%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            ++G  G++G +G +G  G  GP G QG  G +G+ GP+G  G PG QG  G+ G  G KG
Sbjct: 1037 SRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKG 1096

Query: 186  DMGYPGRIGLDGRDGLPGEPGLD------------------------GIPGRNGMD---- 217
             +G PG  G  G  GLPGEPG                          G+PG +GM     
Sbjct: 1097 FLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLG 1156

Query: 218  --GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              G PG+ GL G+ G PG  G +G  G  G +G+RG  G +G  G       K E  S  
Sbjct: 1157 PLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPG 1216

Query: 276  P 276
            P
Sbjct: 1217 P 1217



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 79/189 (41%), Gaps = 51/189 (26%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---------------GKRGPKGDMG 167
            +IG  G+ G +G +G+ GA G+ GPPG  G  GDE               G++G  G  G
Sbjct: 899  DIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPG 958

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---------------PG 212
              G +G PGD G+ GP G+ G  G IGL G  G+ GE G  G+               PG
Sbjct: 959  LDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 1018

Query: 213  R---------------------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                                   GM G  G  G  G DG  G  G+ G KG  GPRG  G
Sbjct: 1019 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1078

Query: 252  KSGINGVPG 260
            + G  G  G
Sbjct: 1079 QPGQQGAAG 1087



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 63/131 (48%), Gaps = 21/131 (16%)

Query: 81   HNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RG 137
              NP V     ++ P    +G      +  PPG +G  G  G  G +GE G KG+    G
Sbjct: 1459 RGNPGVAGLPGAQGP-PGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSG 1517

Query: 138  EKGAPGVVGPPGPQGIPGD------EGKRGPKGDMGYP---------GPQGIPGDEGKRG 182
            E G PGV G  GP+G PGD      +G RGP G MG           GP G+PG +G RG
Sbjct: 1518 EMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRG 1577

Query: 183  PKGDM--GYPG 191
             +GD+  G PG
Sbjct: 1578 SRGDLVSGQPG 1588



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 90/231 (38%), Gaps = 63/231 (27%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           I L  + G   S  E   PG+ G  G+ G  G  G+ G +G  G  G PG +G PGP G+
Sbjct: 744 IGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 803

Query: 154 PGDEGKRGPKGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-- 208
            G  G  G  G +GYPGP+G+ G     G+ G KGD G  G  G+ G  G  G+ G    
Sbjct: 804 LGLIGDTGALGPIGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGL 863

Query: 209 -------------------------------------GIPGRNGMDGIPGKDGLPGKDGI 231
                                                G PG NG +G+ GK   PG  G+
Sbjct: 864 PGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGK---PGARGL 920

Query: 232 PGTNGTNGEKGMTGPRGN------------RGKSGINGVPGTPAICAYKRE 270
           PG        G  GP G+             G+ G  G PG P +   K E
Sbjct: 921 PGP------PGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGE 965



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 84/199 (42%), Gaps = 51/199 (25%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVG 146
            +  PPG  GP G KG+ GA+G  G                     ++G+ G KG PG  G
Sbjct: 899  DIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPG 958

Query: 147  PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------MGYPG 191
              G +G PGD G+ GP G+ G  G  G+ G+ G  G KGD               MG+PG
Sbjct: 959  LDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 1018

Query: 192  RIG------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDG---LPGKDGIPGTNG 236
              G              G  GLPG  G  G  G  G DG  G+ G   L G+ G  G  G
Sbjct: 1019 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1078

Query: 237  TNGEKGMTGPRGNRGKSGI 255
              G++G  G RG+ G  G 
Sbjct: 1079 QPGQQGAAGERGHSGAKGF 1097


>gi|331999944|ref|NP_001193609.1| collagen alpha-1(XXVII) chain [Bos taurus]
          Length = 1841

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 84/145 (57%), Gaps = 9/145 (6%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G+EG +G +G  G 
Sbjct: 1335 RGDRGEPGDPGYPGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGA 1394

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
            PGR G+ G  GLPG     G+ GR G +G+ G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 1395 PGRRGIQGLQGLPGP---RGVVGRQGPEGVAGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 1451

Query: 247  RGNRGKSGINGVPGTPAICAYKRES 271
             G RG  G+ G+PG      +K ES
Sbjct: 1452 AGKRGDPGVAGLPGAQGPPGFKGES 1476



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 94/199 (47%), Gaps = 30/199 (15%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG   +  +   PG  GP G+ G  G+KGE G KG++G+ GAPG  G  G QG+PG  
Sbjct: 1351 GVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPGRRGIQGLQGLPGPR 1410

Query: 158  GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G +G  G  GP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 1411 GVVGRQGPEGVAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGDPGVAGLPGAQGPP 1470

Query: 203  GEPGLDGIPGR---------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT------GPR 247
            G  G  G+PG+          G  G+PG  G PG  G PG +G  G  GM       GP+
Sbjct: 1471 GFKGESGLPGQMGPPGKRGTEGGMGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPQ 1530

Query: 248  GNRGKSGINGVPGTPAICA 266
            G+ G  GI G  G P +  
Sbjct: 1531 GDVGFKGIQGPRGPPGLMG 1549



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 81/143 (56%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G+ G  G  G +G    +GE G PG +GPPG         KRG +G MG 
Sbjct: 1446 PGPMGPAGKRGDPGVAGLPGAQGPPGFKGESGLPGQMGPPG---------KRGTEGGMGL 1496

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G  G+ G  GI G  G  G+ GK+G+ G 
Sbjct: 1497 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPQGDVGFKGIQGPRGPPGLMGKEGIIGP 1556

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1557 LGILGPSGRQGPKGDKGSRGDLG 1579



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 77/145 (53%), Gaps = 12/145 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++
Sbjct: 654 GQKGDPGLSPGKAHDGAKGDMGLPGLTGNPGPLGR---------KGQKGYPGPTGHPGEQ 704

Query: 179 GKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+ GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  
Sbjct: 705 GQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKR 764

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  G RG  G++G PG
Sbjct: 765 GKMGRPGFPGDFGERGPPGLDGNPG 789



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 83/154 (53%), Gaps = 12/154 (7%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G+ G +G  G  G++G+ G PG  G PGP+G  G+EG +G +G  G PG +GI G +
Sbjct: 1345 GYPGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPGRRGIQGLQ 1404

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGL---------DGIP---GRNGMDGIPGKDGLP 226
            G  GP+G +G  G  G+ G DGLPG  G          DG P   G  G  G PG  GLP
Sbjct: 1405 GLPGPRGVVGRQGPEGVAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGDPGVAGLP 1464

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1465 GAQGPPGFKGESGLPGQMGPPGKRGTEGGMGLPG 1498



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 84/170 (49%), Gaps = 33/170 (19%)

Query: 121 KGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           K   GAKG+MG+ G          +G+KG PG  G PG QG PG EG  G KG   YPG 
Sbjct: 665 KAHDGAKGDMGLPGLTGNPGPLGRKGQKGYPGPTGHPGEQGQPGPEGSPGAKG---YPGR 721

Query: 172 QGIPGDEGKRGPKGDMGY---PGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           QG+PG  G  GPKG  GY   PG  GL   DG  GLPG PG  G  GR G  G  G+ G 
Sbjct: 722 QGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGP 781

Query: 226 PGKDGIPGTN---------------GTNGEKGMTGPRGNRGKSGINGVPG 260
           PG DG PG                 GT G  G  GP+G +G  G  G PG
Sbjct: 782 PGLDGNPGELGLPGPPGVPGLIGDMGTLGPIGYPGPKGMKGLMGNVGEPG 831



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 88/166 (53%), Gaps = 27/166 (16%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
           GP+G+KG+ G  G  G  GE+G+   +G+PG  G PG QG+PG  G  GPKG  GY   P
Sbjct: 684 GPLGRKGQKGYPGPTGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLP 743

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRN--------- 214
           G  G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG           
Sbjct: 744 GLFGLPGSDGER---GLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGELGLPGPPGVP 800

Query: 215 ---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G  G  G  G PG  G+ G  G  GE G+ G +G +G  G++G
Sbjct: 801 GLIGDMGTLGPIGYPGPKGMKGLMGNVGEPGLKGDKGEQGVPGVSG 846



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 82/167 (49%), Gaps = 27/167 (16%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            +G  G +G  G  G  GE+G+ G+ GPPGPQG  G  G++G  G+ G+ G +G PG  G 
Sbjct: 1040 RGAKGRRGPRGPDGPAGEQGSKGLKGPPGPQGRLGQPGQQGVAGERGHLGTRGFPGLRGP 1099

Query: 181  RGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLD------GIPGR 213
             GP G                     +MG  G  G  G  GLPGE G+       GIPG 
Sbjct: 1100 SGPPGAKGLPGEPGPQGPQGPIGPPGEMGPKGPPGALGELGLPGEAGMKGDLGPLGIPGE 1159

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G  G+ GL G  G  G +G  G++G  GP G RG+ G  G+ G
Sbjct: 1160 QGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDGERGEKGQEGLKG 1206



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 84/188 (44%), Gaps = 48/188 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------GIPGDEGK 159
           PG  G  G++G+ G +G  G KG  G +G PG VG PGP+            G+PG +G+
Sbjct: 695 PGPTGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGE 754

Query: 160 R------GPKGDMGYPGPQGIPGDEGKRGPK---------------------GDM----- 187
           R      G +G MG P   G PGD G+RGP                      GDM     
Sbjct: 755 RGLPGVPGKRGKMGRP---GFPGDFGERGPPGLDGNPGELGLPGPPGVPGLIGDMGTLGP 811

Query: 188 -GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            GYPG  G+ G  G  GEPGL G  G  G+ G+ G  G  G  G  G  G  G +G  GP
Sbjct: 812 IGYPGPKGMKGLMGNVGEPGLKGDKGEQGVPGVSGDAGFQGDKGSQGLQGFPGARGKPGP 871

Query: 247 RGNRGKSG 254
            G  G  G
Sbjct: 872 VGKVGDKG 879



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 83/187 (44%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPK--------- 163
           GP G +G IG  G  G+ G  GE+G PGV G  G     G PGD G+RGP          
Sbjct: 732 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGEL 791

Query: 164 ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
                       GDMG  GP G PG +G +G  G++G PG  G  G  G+P   G+ G  
Sbjct: 792 GLPGPPGVPGLIGDMGTLGPIGYPGPKGMKGLMGNVGEPGLKGDKGEQGVPGVSGDAGFQ 851

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKS 253
           G  G  G+ G PG  G PG  G  G  G+                G  G  GP G +GK 
Sbjct: 852 GDKGSQGLQGFPGARGKPGPVGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGVKGKP 911

Query: 254 GINGVPG 260
           G  G+PG
Sbjct: 912 GARGLPG 918



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 89/184 (48%), Gaps = 27/184 (14%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
            PPG QG +GQ G+ G  GE G  G RG  G  G  GPPG +G+PG+ G +          
Sbjct: 1066 PPGPQGRLGQPGQQGVAGERGHLGTRGFPGLRGPSGPPGAKGLPGEPGPQGPQGPIGPPG 1125

Query: 161  --GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
              GPKG  G  G  G+PG+ G +G  G +G PG  GL G+    GEPGL+G  G  G DG
Sbjct: 1126 EMGPKGPPGALGELGLPGEAGMKGDLGPLGIPGEQGLIGQR---GEPGLEGDSGPAGPDG 1182

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKG------------MTGPRGNRGKSGINGVPGTPAICA 266
            + G  G PG DG  G  G  G KG            + GP G  GK G  G  G      
Sbjct: 1183 LKGDRGDPGPDGERGEKGQEGLKGEDGPPGPPGITGIRGPEGKPGKQGEKGRTGAKGAKG 1242

Query: 267  YKRE 270
            Y+ +
Sbjct: 1243 YQGQ 1246



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 90/183 (49%), Gaps = 30/183 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------PPGPQGIPGDEGKRGPK 163
           G  GP G KG +G  GE G+KG++GE+G PGV G           G QG PG  GK GP 
Sbjct: 813 GYPGPKGMKGLMGNVGEPGLKGDKGEQGVPGVSGDAGFQGDKGSQGLQGFPGARGKPGPV 872

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------- 215
           G +G  G  G PG  G  G  GD+G PG    +G +G+ G+PG  G+PG  G        
Sbjct: 873 GKVGDKGSIGFPGPPGPEGFPGDIGPPGD---NGPEGVKGKPGARGLPGPRGQLGPEGDE 929

Query: 216 ----------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                     ++G PG+ G PG+ G  G  G  G+ G  GP G +G  G  G+ G P I 
Sbjct: 930 GPMGPPGVPGLEGQPGRKGFPGRPGPDGLKGEPGDAGRPGPVGEQGLLGFVGLVGEPGIM 989

Query: 266 AYK 268
             K
Sbjct: 990 GEK 992



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 94/205 (45%), Gaps = 48/205 (23%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIP 154
             M+G   +  E   PGL+G  G++G  G  G+ G +G++G +G    PG  G PGP G  
Sbjct: 819  GMKGLMGNVGE---PGLKGDKGEQGVPGVSGDAGFQGDKGSQGLQGFPGARGKPGPVGKV 875

Query: 155  GDEGK---------------------RGPKGDMGYPGPQGIPGDEGKRGPKGD------- 186
            GD+G                       GP+G  G PG +G+PG  G+ GP+GD       
Sbjct: 876  GDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGVKGKPGARGLPGPRGQLGPEGDEGPMGPP 935

Query: 187  -----------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                        G+PGR    G DGL GEPG  G PG  G  G+ G  GL G+ GI G  
Sbjct: 936  GVPGLEGQPGRKGFPGR---PGPDGLKGEPGDAGRPGPVGEQGLLGFVGLVGEPGIMGEK 992

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G  G +G  G  G+PG
Sbjct: 993  GDRGMMGPPGAPGPKGSMGHPGIPG 1017



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 86/190 (45%), Gaps = 51/190 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQG----------------- 152
            GL+GP G +G +G  G+ GV GERG    +G PG+ GP GP G                 
Sbjct: 1062 GLKGPPGPQGRLGQPGQQGVAGERGHLGTRGFPGLRGPSGPPGAKGLPGEPGPQGPQGPI 1121

Query: 153  -------------------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
                               +PG+ G +G  G +G PG QG+ G  G+ G +GD G  G  
Sbjct: 1122 GPPGEMGPKGPPGALGELGLPGEAGMKGDLGPLGIPGEQGLIGQRGEPGLEGDSGPAGPD 1181

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNGEKGMT 244
            GL G     G+PG DG  G  G +G+ G+DG P         G +G PG  G  G  G  
Sbjct: 1182 GLKGDR---GDPGPDGERGEKGQEGLKGEDGPPGPPGITGIRGPEGKPGKQGEKGRTGAK 1238

Query: 245  GPRGNRGKSG 254
            G +G +G+ G
Sbjct: 1239 GAKGYQGQLG 1248



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 86/208 (41%), Gaps = 57/208 (27%)

Query: 111  PPGLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVGPPG 149
            PPG  GP G KG+ GA+G  G                     ++G+ G KG PG  GP G
Sbjct: 898  PPGDNGPEGVKGKPGARGLPGPRGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGPDG 957

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIG 194
             +G PGD G+ GP G+ G  G  G+ G+ G  G KGD               MG+PG  G
Sbjct: 958  LKGEPGDAGRPGPVGEQGLLGFVGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPGIPG 1017

Query: 195  ---------------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                                 + G  G  G  G DG  G  G  G+ G  G  G+ G PG
Sbjct: 1018 VVGNPGEPGPPGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSKGLKGPPGPQGRLGQPG 1077

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  GE+G  G RG  G  G +G PG 
Sbjct: 1078 QQGVAGERGHLGTRGFPGLRGPSGPPGA 1105



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 95/229 (41%), Gaps = 69/229 (30%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKG---------------EIGAKGEMGVKGERGEKGAP 142
             +QGF  +  +   PG  G +G KG               +IG  G+ G +G +G+ GA 
Sbjct: 858  GLQGFPGARGK---PGPVGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGVKGKPGAR 914

Query: 143  GVVGPPGPQGIPGDE------------GKRGPKGDMGYPGPQGI---PGDEGKRGPKGDM 187
            G+ GP G  G  GDE            G+ G KG  G PGP G+   PGD G+ GP G+ 
Sbjct: 915  GLPGPRGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGPDGLKGEPGDAGRPGPVGEQ 974

Query: 188  GYPGRIGLDGRDGLPGEP------------------GLDGIPG----------------- 212
            G  G +GL G  G+ GE                   G  GIPG                 
Sbjct: 975  GLLGFVGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPGIPGVVGNPGEPGPPGPPGSR 1034

Query: 213  -RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               GM G  G+ G  G DG  G  G+ G KG  GP+G  G+ G  GV G
Sbjct: 1035 GPPGMRGAKGRRGPRGPDGPAGEQGSKGLKGPPGPQGRLGQPGQQGVAG 1083



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 76/176 (43%), Gaps = 48/176 (27%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDMGYPGP 171
            +G KG  GA GE+G+ GE G KG  G      P GIPG++      G+ G +GD G  GP
Sbjct: 1127 MGPKGPPGALGELGLPGEAGMKGDLG------PLGIPGEQGLIGQRGEPGLEGDSGPAGP 1180

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRD------------GLPGEPGLDGIPGRNGMDGI 219
             G+ GD G  GP G+ G  G+ GL G D            G  G+PG  G  GR G  G 
Sbjct: 1181 DGLKGDRGDPGPDGERGEKGQEGLKGEDGPPGPPGITGIRGPEGKPGKQGEKGRTGAKGA 1240

Query: 220  PGKDGLPGK------------------------DGIPGTNGTNGEKGMTGPRGNRG 251
             G  G  G+                         G PG  G  GE G+ G  G++G
Sbjct: 1241 KGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKG 1296



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 74/162 (45%), Gaps = 42/162 (25%)

Query: 132  VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
            ++G +G +G  G  GP G QG  G +G  GP+G +G PG QG+    G+RG  G  G+PG
Sbjct: 1039 MRGAKGRRGPRGPDGPAGEQGSKGLKGPPGPQGRLGQPGQQGV---AGERGHLGTRGFPG 1095

Query: 192  RIGLDGRDGLPGE---------------------------PGL---DGIPGRNGMD---- 217
               L G  G PG                            PG     G+PG  GM     
Sbjct: 1096 ---LRGPSGPPGAKGLPGEPGPQGPQGPIGPPGEMGPKGPPGALGELGLPGEAGMKGDLG 1152

Query: 218  --GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GIPG+ GL G+ G PG  G +G  G  G +G+RG  G +G
Sbjct: 1153 PLGIPGEQGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDG 1194



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 91/240 (37%), Gaps = 85/240 (35%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVG---------- 146
            QG      E   PGL+G  G  G  G KG+    G  GERGEKG  G+ G          
Sbjct: 1160 QGLIGQRGE---PGLEGDSGPAGPDGLKGDRGDPGPDGERGEKGQEGLKGEDGPPGPPGI 1216

Query: 147  --PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD---------------EGKRGPKGDMGY 189
                GP+G PG +G++G  G  G  G QG  G+               +G RG  G  G 
Sbjct: 1217 TGIRGPEGKPGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGA 1276

Query: 190  PGRIGLDGRDGLP----------------------------------------------- 202
            PGR+G  G  GL                                                
Sbjct: 1277 PGRMGAQGEPGLAGYDGHKGIMGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRG 1336

Query: 203  --GEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GEPG  G PG+ G+ G+   PG+ G PG  G  G  G  G KG  GP+G +GK+G  G
Sbjct: 1337 DRGEPGDPGYPGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPG 1396



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 77/169 (45%), Gaps = 42/169 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PG  GP G KGE G  G  G  GE+G  G  G+VG PG   I G++G RG          
Sbjct: 950  PGRPGPDGLKGEPGDAGRPGPVGEQGLLGFVGLVGEPG---IMGEKGDRGMMGPPGAPGP 1006

Query: 163  KGDMGYPGPQGI---------------------PGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            KG MG+PG  G+                      G +G+RGP+G          DG  G 
Sbjct: 1007 KGSMGHPGIPGVVGNPGEPGPPGPPGSRGPPGMRGAKGRRGPRGP---------DGPAGE 1057

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
             G  GL G PG  G  G PG+ G+ G+ G  GT G  G +G +GP G +
Sbjct: 1058 QGSKGLKGPPGPQGRLGQPGQQGVAGERGHLGTRGFPGLRGPSGPPGAK 1106



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 55/100 (55%), Gaps = 12/100 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVV---GPPGPQ---GIPGDEG 158
            +  PPG +G  G  G  G +GE G KG+    GE G PG+    GP GPQ   G  G +G
Sbjct: 1481 QMGPPGKRGTEGGMGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPQGDVGFKGIQG 1540

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
             RGP G MG     GP GI G  G++GPKGD G  G +GL
Sbjct: 1541 PRGPPGLMGKEGIIGPLGILGPSGRQGPKGDKGSRGDLGL 1580


>gi|14017957|dbj|BAB47499.1| KIAA1870 protein [Homo sapiens]
          Length = 832

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 93/167 (55%), Gaps = 16/167 (9%)

Query: 133 KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           +G+RGE G PG  G  G QG+   PG +G+ G  G  G+PGP+G  G EG +G +G  G 
Sbjct: 326 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGA 385

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
           PGR G+ G  GLPG     G+ GR G++GI G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 386 PGRRGVQGLQGLPGP---RGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 442

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
            G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 443 AGKRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 482



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 104/239 (43%), Gaps = 41/239 (17%)

Query: 43  DKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGF 102
           D+GD  +   P  P  E V     + +R +  +Q    H  P  W             G 
Sbjct: 325 DRGDRGEPGDPGYPGQEGV-----QGLRGKPGQQGQPGHPGPRGW------------PGP 367

Query: 103 CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------- 155
             S     P G QG  G  G  G +G  G+ G RG  G  G+ G  GP G+PG       
Sbjct: 368 KGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQ 427

Query: 156 --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRDGL 201
                   D G  GP G  G PG  G+PG +G  G KG+ G PG++      G +GR GL
Sbjct: 428 QGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGL 487

Query: 202 P---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           P   GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G
Sbjct: 488 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVG 546



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G++G  G  G  G +G    +GE G PG +GPPG         KRG +G  G 
Sbjct: 437 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGRTGL 487

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 488 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGP 547

Query: 229 DGIPGTNGTNGEKGMTGPRGNRG 251
            GI G +G  G KG  G RG+ G
Sbjct: 548 LGILGPSGLPGPKGDKGSRGDWG 570



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 85/176 (48%), Gaps = 18/176 (10%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            +QG      +   PG  GP G  G  G+KG  G KG++G+ GAPG  G  G QG+PG  
Sbjct: 342 GVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPR 401

Query: 158 GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G  G +G  G  GP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 402 GVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 461

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G  G+PG+    G PGK G  G+ G+PG  G  G KG  G  G  G  G+ G+
Sbjct: 462 GFKGESGLPGQL---GPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGL 514



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 101/223 (45%), Gaps = 41/223 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
           G +G  G  G  G +G  G++G+ G++G PG  GP   PGP+G  G EG +G +G  G P
Sbjct: 327 GDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAP 386

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------------------- 204
           G +G+ G +G  GP+G +G  G  G+ G DGLPG                          
Sbjct: 387 GRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKR 446

Query: 205 --PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
             PG+ G+PG  G  G  G+ GLPG+ G PG  GT G  G+    GN+G+ G  G PG  
Sbjct: 447 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLP---GNQGEPGSKGQPGDS 503

Query: 263 AICAYKRESCSLLPNSETSQLLI--------PPTIVGSEHIFS 297
               +   +    P      +          PP ++G E I  
Sbjct: 504 GEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVG 546



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 89/245 (36%), Gaps = 76/245 (31%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------- 146
           QG      E    G  GP+G  G  G +G+ G  GE GEKG  G++G             
Sbjct: 151 QGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGV 210

Query: 147 --PPGPQGIPGDEGKRGPKGDMGYP---------------------------GPQGIPGD 177
             P G  G  G++G+ G KG  GY                            GP G PG 
Sbjct: 211 RGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGR 270

Query: 178 EGKRGPKGDMGYPGRIGL---------------DGRDGLP-------------------G 203
            G +G  G  GY G  G+                G DG                     G
Sbjct: 271 MGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRG 330

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           EPG  G PG+ G+ G+ GK G  G+ G PG  G  G KG  G  G +GK G  G PG   
Sbjct: 331 EPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRG 390

Query: 264 ICAYK 268
           +   +
Sbjct: 391 VQGLQ 395



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 68/159 (42%), Gaps = 39/159 (24%)

Query: 112 PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 130 PGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGE 189

Query: 169 PGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEP-------- 205
            G +G+ G+               EGK G +G+ G  G  G  G  G  GE         
Sbjct: 190 KGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGP 249

Query: 206 -------------GLDGIPGRNGMDGIPGKDGLPGKDGI 231
                        G  G PGR G  G PG  G  G  GI
Sbjct: 250 PGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGI 288



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 54/100 (54%), Gaps = 12/100 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
           +  PPG +G  G+ G  G +GE G KG+    GE G PG+ G  GP+G PGD      +G
Sbjct: 472 QLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQG 531

Query: 159 KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
            RGP G MG     GP GI G  G  GPKGD G  G  GL
Sbjct: 532 PRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGL 571



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 30/143 (20%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           +G KG  GA GE G+ GE G KG  G      P G PG++G  G +G+         PG 
Sbjct: 118 MGPKGPPGAVGEPGLPGEAGMKGDLG------PLGTPGEQGLIGQRGE---------PGL 162

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GI 231
           EG  GP         +G DG  G  G+PG DG  G  G +G+ G+DG PG        G 
Sbjct: 163 EGDSGP---------MGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGP 213

Query: 232 PGTNGTNGEKGMTGPRGNRGKSG 254
            G +G  GEKG TG +G +G  G
Sbjct: 214 EGKSGKQGEKGRTGAKGAKGYQG 236


>gi|148690109|gb|EDL22056.1| procollagen, type IV, alpha 1, isoform CRA_a [Mus musculus]
          Length = 1141

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 104/202 (51%), Gaps = 34/202 (16%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQG-- 152
           V   G   S  E   PG+ G    +G  G+ GE G KGE+G+ G PG+   G PG +G  
Sbjct: 485 VGGMGLPGSPGEKGVPGIPG---SQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQ 541

Query: 153 ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                PG  G++G KG  G PG   +PG  G RG  G++G+PG  GL G  G  G PGLD
Sbjct: 542 GLAGFPGSPGEKGEKGSAGTPG---MPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLD 598

Query: 209 GIPGRNGMDGIPG---------KDGLPGKDGIPGTNGTNGEKGMT-----------GPRG 248
           G+PG  G  G+PG         + G PG DGIPG+ G  GE+G+            G +G
Sbjct: 599 GVPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFPGFPGSKGDKG 658

Query: 249 NRGKSGINGVPGTPAICAYKRE 270
           ++G+ G  G+ G+P I   K E
Sbjct: 659 SKGEVGFPGLAGSPGIPGVKGE 680



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 86/154 (55%), Gaps = 13/154 (8%)

Query: 119 GQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GQKG+ G KG++G    KG RG+ G PGV   PG  G  G  G+ GPKGD G  G  G P
Sbjct: 420 GQKGDQGEKGQIGPTGDKGSRGDPGTPGV---PGKDGQAGHPGQPGPKGDPGLSGTPGSP 476

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G +G  G MG PG  G  G  G+PG  G+ G PG  G  G  G+ GLPG  GIPG  
Sbjct: 477 GLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGI-GIPGRP 535

Query: 236 GTNGEKGMT------GPRGNRGKSGINGVPGTPA 263
           G  G++G+       G +G +G +G  G+PG+P 
Sbjct: 536 GDKGDQGLAGFPGSPGEKGEKGSAGTPGMPGSPG 569



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 91/164 (55%), Gaps = 18/164 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGY 168
           PG QG  G  G  G+KGEMGV G  G+ G+PG  G PG  G  GD G     GP+GD G+
Sbjct: 335 PGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGF 394

Query: 169 PGPQG---IPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G +G   +PG  G          +G KGD G  G+IG  G  G  G+PG  G+PG++G 
Sbjct: 395 KGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQ 454

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 455 AGHPGQ---PGPKGDPGLSGTPGSPGLPGPKGSVGGMGLPGSPG 495



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
           GP G KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 432 GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGPKGSVGGMGLP 491

Query: 167 ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
                    G PG QG+PG  G++G KG+        +G PGR G  G  GL G PG  G
Sbjct: 492 GSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPG 551

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G PG  G PG  G PG  G  G  G+ G +G++G  G++GVPG
Sbjct: 552 EKGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLDGVPG 602



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 83/175 (47%), Gaps = 23/175 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------- 155
           PG  GP G  G  G KG+ G+ G  G +G PG  G  G  G+PG                
Sbjct: 362 PGSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQ 421

Query: 156 -----DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
                ++G+ GP GD G  G  G PG  GK G  G  G PG  G  G  G PG PGL G 
Sbjct: 422 KGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGP 481

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN--GVPGTPA 263
            G  G  G+PG  G  G  GIPG+ G  G  G  G +G +G+SG+   G+PG P 
Sbjct: 482 KGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPG 536



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 81/162 (50%), Gaps = 27/162 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  G  G  G +G+ G  G  G              GIPG++G  G  G +G+P 
Sbjct: 119 PPGAAGLPGSPGFPGPQGDRGFPGTPGRP------------GIPGEKGAVGQPG-IGFP- 164

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--------GIPGRNGMDGIPGK 222
             G+PG +G  G  G++G PG  G  G +GLPG PG          G+PG  G  G+PG 
Sbjct: 165 --GLPGPKGVDGLPGEIGRPGSPGRPGFNGLPGNPGPQGQKGEPGIGLPGLKGQPGLPGI 222

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G PG+ G  G  G  GE+G+TGP G +   GI G PG P +
Sbjct: 223 PGTPGEKGSIGGPGVPGEQGLTGPPGLQ---GIRGDPGPPGV 261



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 72/148 (48%), Gaps = 24/148 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G KG++G +G PG+ G  G  G+PG +G          PG  G PG +G+ G  G  G P
Sbjct: 312 GPKGDKGSQGLPGLTGQSGLPGLPGQQG---------TPGVPGFPGSKGEMGVMGTPGQP 362

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT------------- 237
           G  G  G  GLPGE G  G+PG +G  G PG  G  G  G+PG  G+             
Sbjct: 363 GSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQK 422

Query: 238 --NGEKGMTGPRGNRGKSGINGVPGTPA 263
              GEKG  GP G++G  G  G PG P 
Sbjct: 423 GDQGEKGQIGPTGDKGSRGDPGTPGVPG 450



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 87/207 (42%), Gaps = 65/207 (31%)

Query: 112 PGLQGPIGQKGEIG-----AKGEMGVKG------ERGEKGAPGV------VGPPGPQGIP 154
           PG  GP GQKGE G      KG+ G+ G      E+G  G PGV       GPPG QGI 
Sbjct: 194 PGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGIR 253

Query: 155 GDEGKRGP-----------------------------------KGDMGYPGPQGIPGDEG 179
           GD G  G                                    KG+ G+P   G PG + 
Sbjct: 254 GDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFP---GFPGLD- 309

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------GRNGMDGIPGKDGLPGKDG 230
             GPKGD G  G  GL G+ GLPG PG  G P         G  G+ G PG+ G PG  G
Sbjct: 310 MPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAG 369

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  G  G+ G+ G  G RG  G  G
Sbjct: 370 TPGLPGEKGDHGLPGSSGPRGDPGFKG 396



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 93/225 (41%), Gaps = 67/225 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--PGPQGIPGDEGKRGPKGDMGYP 169
           PG  GP G +G  G  G  G+ GE+G  G PG+  P  PGP+G+ G  G+ G  G  G P
Sbjct: 129 PGFPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGLPGEIGRPGSPGRP 188

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------IPGRNGMDGIP 220
           G  G+PG+ G +G KG+ G  G  GL G+ GLPG PG  G         +PG  G+ G P
Sbjct: 189 GFNGLPGNPGPQGQKGEPGI-GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPP 247

Query: 221 GKDGLPGKDGIPGTNGT--------------------------------NGEKG------ 242
           G  G+ G  G PG  G                                  GEKG      
Sbjct: 248 GLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFPGFPG 307

Query: 243 --MTGPRGNRGKSGI---------------NGVPGTPAICAYKRE 270
             M GP+G++G  G+                G PG P     K E
Sbjct: 308 LDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGE 352



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 84/206 (40%), Gaps = 63/206 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG  GP GQKGE G+ G  G  GE+GE+G PG   P    G PG +G +G KG++G+PG 
Sbjct: 613 PGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFP----GFPGSKGDKGSKGEVGFPGL 668

Query: 171 --PQGIPGDEGKRG-----------------------PKGDMGYP--------------- 190
               GIPG +G++G                       PKGD G                 
Sbjct: 669 AGSPGIPGVKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPP 728

Query: 191 ------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                 G  G  G  G PG PG            +PG  G PG  G+PG  G+ G  G  
Sbjct: 729 GFPGINGPKGDKGNQGWPGAPG------------VPGPKGDPGFQGMPGIGGSPGITGSK 776

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G  G  G  G  G P +   K +
Sbjct: 777 GDMGLPGVPGFQGQKGLPGLQGVKGD 802


>gi|449672764|ref|XP_002158319.2| PREDICTED: collagen alpha-2(I) chain-like [Hydra magnipapillata]
          Length = 1412

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 92/173 (53%), Gaps = 6/173 (3%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G    T +   PG +GP+G  G +G  G+ G +G  G+ G PG  G  G +GIPG +G 
Sbjct: 437 RGEPGRTGQMGIPGARGPVGDPGPVGLDGKEGERGIPGKDGLPGPPGQAGLRGIPGLQGA 496

Query: 160 RGPKGDMGYPGPQG------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G KGD G+ G +G       PGD+G+ G  GD G PG  G  G  G PGE G  G  G 
Sbjct: 497 TGEKGDKGFKGNKGEIGFDGAPGDKGETGDVGDQGAPGLPGKQGEAGEPGEQGNRGAQGF 556

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G+ G PG  G  GK G PGT G+ G  G+ G  G RG SG  G PG+P +  
Sbjct: 557 VGLPGAPGPQGRQGKRGTPGTPGSRGADGLPGRPGERGYSGEQGTPGSPGVIG 609



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 89/165 (53%), Gaps = 9/165 (5%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
               +G    +    P G++GP G +G  G +G  G+ GE G+ G  G VG PG +G PG
Sbjct: 226 AAGPEGLMGPSGPTGPDGVKGPQGPRGSDGQQGTAGLAGESGDPGPSGPVGQPGQRGEPG 285

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G RG  GD G  GPQG+   +G  GP GD G PG +GL    G PG  G  G PG+ G
Sbjct: 286 YPGIRGDSGDRGDTGPQGL---DGLDGPPGDRGLPGPVGL---PGAPGPVGERGEPGKQG 339

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+ G  G  GIPG  G  G+K   GPRG +G+ G+ G PG
Sbjct: 340 PRGFPGQQGEQGSPGIPGVVGEAGDK---GPRGLQGQVGVAGPPG 381



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 92/176 (52%), Gaps = 12/176 (6%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQK---GEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGI 153
           QG   S      PG++G IG+K   G IG KG  G  G  G+ G PG  GP   PGP G+
Sbjct: 404 QGLPGSPGLPGLPGIKGHIGEKGFTGPIGEKGNRGEPGRTGQMGIPGARGPVGDPGPVGL 463

Query: 154 PGDEGKRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            G EG+RG  G  G PGP      +GIPG +G  G KGD G+ G  G  G DG PG+ G 
Sbjct: 464 DGKEGERGIPGKDGLPGPPGQAGLRGIPGLQGATGEKGDKGFKGNKGEIGFDGAPGDKGE 523

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G  G+PGK G  G+ G  G  G  G  G+ G  G +G+ G  G PGTP 
Sbjct: 524 TGDVGDQGAPGLPGKQGEAGEPGEQGNRGAQGFVGLPGAPGPQGRQGKRGTPGTPG 579



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 103/210 (49%), Gaps = 29/210 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYP 169
           G++G +G+ G  GAKG++G  GE GE G PG+    G  GP G  G +G  GP+G MG  
Sbjct: 177 GVKGELGEPGPKGAKGDVGQNGEAGENGLPGIKGDTGARGPNGTIGFQGAAGPEGLMGPS 236

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------------GEPGLDGI------- 210
           GP G  G +G +GP+G  G  G  GL G  G P            GEPG  GI       
Sbjct: 237 GPTGPDGVKGPQGPRGSDGQQGTAGLAGESGDPGPSGPVGQPGQRGEPGYPGIRGDSGDR 296

Query: 211 -----PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                 G +G+DG PG  GLPG  G+PG  G  GE+G  G +G RG  G  G  G+P I 
Sbjct: 297 GDTGPQGLDGLDGPPGDRGLPGPVGLPGAPGPVGERGEPGKQGPRGFPGQQGEQGSPGIP 356

Query: 266 AYKRESCSLLPNSETSQLLI--PPTIVGSE 293
               E+    P     Q+ +  PP   GS+
Sbjct: 357 GVVGEAGDKGPRGLQGQVGVAGPPGESGSD 386



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 88/158 (55%), Gaps = 9/158 (5%)

Query: 112 PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGLQG  G+KG+ G    KGE+G  G  G+KG  G VG  G  G+PG +G+ G  G+ G 
Sbjct: 491 PGLQGATGEKGDKGFKGNKGEIGFDGAPGDKGETGDVGDQGAPGLPGKQGEAGEPGEQGN 550

Query: 169 PGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G Q   G+PG  G +G +G  G PG  G  G DGLPG PG  G  G  G  G PG  G 
Sbjct: 551 RGAQGFVGLPGAPGPQGRQGKRGTPGTPGSRGADGLPGRPGERGYSGEQGTPGSPGVIGE 610

Query: 226 PGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPG 260
           PG+ G PG  G  G +   GM G  G+ G+ G+ G+PG
Sbjct: 611 PGRKGPPGKQGQKGAQGDIGMPGEAGSPGEIGVAGIPG 648



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 85/164 (51%), Gaps = 6/164 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
           GL GP GQ G  G  G  G  GE+G+KG  G  G  G  G PGD+G+ G  GD G PG  
Sbjct: 477 GLPGPPGQAGLRGIPGLQGATGEKGDKGFKGNKGEIGFDGAPGDKGETGDVGDQGAPGLP 536

Query: 171 ----PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                 G PG++G RG +G +G PG  G  GR G  G PG  G  G +G+ G PG+ G  
Sbjct: 537 GKQGEAGEPGEQGNRGAQGFVGLPGAPGPQGRQGKRGTPGTPGSRGADGLPGRPGERGYS 596

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G+ G PG+ G  GE G  GP G +G+ G  G  G P       E
Sbjct: 597 GEQGTPGSPGVIGEPGRKGPPGKQGQKGAQGDIGMPGEAGSPGE 640



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 98/198 (49%), Gaps = 27/198 (13%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG---------EMGVKGERGEKGAPGVVGPP 148
             QGF        P G QG  G  G  G++G         E G  GE+G  G+PGV+G P
Sbjct: 552 GAQGFVGLPGAPGPQGRQGKRGTPGTPGSRGADGLPGRPGERGYSGEQGTPGSPGVIGEP 611

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPG-- 203
           G +G PG +G++G +GD+G PG  G PG+    G  GP+G+ G PG  G  G  G  G  
Sbjct: 612 GRKGPPGKQGQKGAQGDIGMPGEAGSPGEIGVAGIPGPQGNPGLPGDEGEIGEAGDRGRD 671

Query: 204 -------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                        +PGL G PG  G  G+PG+DG PG+ G+PG  G  G+ G  G +G  
Sbjct: 672 GQPGGRGAPGPRGKPGLPGNPGLRGDTGVPGEDGKPGEIGVPGAPGNPGDIGQPGSQGPM 731

Query: 251 GKSGINGVPGTPAICAYK 268
           GK G  G+ G      +K
Sbjct: 732 GKPGNPGMQGDVGPKGFK 749



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 96/200 (48%), Gaps = 36/200 (18%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGVV 145
             QG      E   PG  GP+GQ G+ G  G  G++G+ G++G             PG  
Sbjct: 255 GQQGTAGLAGESGDPGPSGPVGQPGQRGEPGYPGIRGDSGDRGDTGPQGLDGLDGPPGDR 314

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G PGP G+PG  G  G +G+ G  GP+G PG +G++G  G  G  G  G  G  GL G+ 
Sbjct: 315 GLPGPVGLPGAPGPVGERGEPGKQGPRGFPGQQGEQGSPGIPGVVGEAGDKGPRGLQGQV 374

Query: 206 GLDGIPGRNGMD------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGP- 246
           G+ G PG +G D                  G+PG  GLPG   +PG  G  GEKG TGP 
Sbjct: 375 GVAGPPGESGSDGRPGPPGPNGAPGQRGNQGLPGSPGLPG---LPGIKGHIGEKGFTGPI 431

Query: 247 --RGNRGKSGINGVPGTPAI 264
             +GNRG+ G  G  G P  
Sbjct: 432 GEKGNRGEPGRTGQMGIPGA 451



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 92/187 (49%), Gaps = 24/187 (12%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      E   PG QG  G +G +G  G  G +G +G++G PG  G  G  G+PG  G+R
Sbjct: 534 GLPGKQGEAGEPGEQGNRGAQGFVGLPGAPGPQGRQGKRGTPGTPGSRGADGLPGRPGER 593

Query: 161 GPKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G+ G PG  G+ G+ G++GP   +G  G  G IG+ G  G PGE G+ GIPG  G  
Sbjct: 594 GYSGEQGTPGSPGVIGEPGRKGPPGKQGQKGAQGDIGMPGEAGSPGEIGVAGIPGPQGNP 653

Query: 218 GIPGKDGLPG---------------------KDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G+PG +G  G                     K G+PG  G  G+ G+ G  G  G+ G+ 
Sbjct: 654 GLPGDEGEIGEAGDRGRDGQPGGRGAPGPRGKPGLPGNPGLRGDTGVPGEDGKPGEIGVP 713

Query: 257 GVPGTPA 263
           G PG P 
Sbjct: 714 GAPGNPG 720



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 97/192 (50%), Gaps = 42/192 (21%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVG------P 147
           + + G   +  +   PG QGP+G+ G  G +G++G    KG RG +G PG +G       
Sbjct: 710 IGVPGAPGNPGDIGQPGSQGPMGKPGNPGMQGDVGPKGFKGARGPRGRPGKIGQIGEIGK 769

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
            G  G  GD+G  G +G +G PG QG+PG                +GK GPKGD G   R
Sbjct: 770 KGESGEKGDQGLPGLQGAIGIPGNQGLPGLAGSAGEQGPQGPPGPDGKLGPKGDKG---R 826

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DGR G PG PG DGI   NG++G PGKD            G+ G +G  GPRG +G 
Sbjct: 827 SGPDGRPGSPGRPGPDGI---NGVNGQPGKD------------GSRGPQGHQGPRGKQGN 871

Query: 253 SGINGVPGTPAI 264
            G  G+PGT  +
Sbjct: 872 IGPIGLPGTSGM 883



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 88/170 (51%), Gaps = 24/170 (14%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGD 156
           QG   S      PG +GP G++G+ GA+G++G+ GE G  G  GV G PGPQ   G+PGD
Sbjct: 599 QGTPGSPGVIGEPGRKGPPGKQGQKGAQGDIGMPGEAGSPGEIGVAGIPGPQGNPGLPGD 658

Query: 157 EGKRGPKGDMGYPGPQ------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           EG+ G  GD G  G              G+PG+ G R   GD G P      G DG PGE
Sbjct: 659 EGEIGEAGDRGRDGQPGGRGAPGPRGKPGLPGNPGLR---GDTGVP------GEDGKPGE 709

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G+ G PG  G  G PG  G  GK G PG  G  G KG  G RG RG+ G
Sbjct: 710 IGVPGAPGNPGDIGQPGSQGPMGKPGNPGMQGDVGPKGFKGARGPRGRPG 759



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 99/200 (49%), Gaps = 54/200 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGP--- 162
           PG  GP+G++GE G +G  G  G++GE+G+PG+       G  GP+G+ G  G  GP   
Sbjct: 323 PGAPGPVGERGEPGKQGPRGFPGQQGEQGSPGIPGVVGEAGDKGPRGLQGQVGVAGPPGE 382

Query: 163 ------------------KGDMGYPGPQGIPG---------DEGKRGP---KGDMGYPGR 192
                             +G+ G PG  G+PG         ++G  GP   KG+ G PGR
Sbjct: 383 SGSDGRPGPPGPNGAPGQRGNQGLPGSPGLPGLPGIKGHIGEKGFTGPIGEKGNRGEPGR 442

Query: 193 IGLDGRDGL------PGEPGLDGIPGRNGMDGIPGKDGLPGK------DGIPGTNGTNGE 240
            G  G  G       PG  GLD   G+ G  GIPGKDGLPG        GIPG  G  GE
Sbjct: 443 TGQMGIPGARGPVGDPGPVGLD---GKEGERGIPGKDGLPGPPGQAGLRGIPGLQGATGE 499

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  G +GN+G+ G +G PG
Sbjct: 500 KGDKGFKGNKGEIGFDGAPG 519



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 99/230 (43%), Gaps = 60/230 (26%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG- 155
           V  +GF  +     P G  G IGQ GEIG KGE G KG++G  G  G +G PG QG+PG 
Sbjct: 743 VGPKGFKGA---RGPRGRPGKIGQIGEIGKKGESGEKGDQGLPGLQGAIGIPGNQGLPGL 799

Query: 156 --------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                          +GK GPKGD            +G+ GP G  G PGR G DG +G+
Sbjct: 800 AGSAGEQGPQGPPGPDGKLGPKGD------------KGRSGPDGRPGSPGRPGPDGINGV 847

Query: 202 PGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNG---------------- 239
            G+PG DG  G  G  G  GK       GLPG  G+PG  G  G                
Sbjct: 848 NGQPGKDGSRGPQGHQGPRGKQGNIGPIGLPGTSGMPGLPGPRGPTGDNGADGSDGSDGD 907

Query: 240 -----EKGMTGPRGNRGKSGINGVP---GTPAICAYKRESCSLLPNSETS 281
                + G  GP+G  G  G NG P   G P +   + E     P+ +  
Sbjct: 908 IGDDGQVGSQGPQGEAGADGSNGAPGRNGNPGVPGPRGEKGEKGPSGDVG 957



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 88/181 (48%), Gaps = 24/181 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGV---------KGERGEKGAPG 143
           +   +G         P GL+G     GQKGE G+KG MGV          G+RG KG  G
Sbjct: 121 ISGPRGLTGDPGNVGPKGLRGKDGREGQKGEPGSKGLMGVTGNPGPSGPPGQRGIKGVKG 180

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            +G PGP+G  GD G+ G  G+ G P   GI GD G RGP G +G+ G  G +       
Sbjct: 181 ELGEPGPKGAKGDVGQNGEAGENGLP---GIKGDTGARGPNGTIGFQGAAGPE------- 230

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             GL G  G  G DG+ G  G  G DG  GT G  GE G  GP G  G+ G  G PG P 
Sbjct: 231 --GLMGPSGPTGPDGVKGPQGPRGSDGQQGTAGLAGESGDPGPSGPVGQPGQRGEPGYPG 288

Query: 264 I 264
           I
Sbjct: 289 I 289



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 98/209 (46%), Gaps = 42/209 (20%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG------------------- 137
           + M G   S  E    G+ GP G  G  G +GE+G  G+RG                   
Sbjct: 629 IGMPGEAGSPGEIGVAGIPGPQGNPGLPGDEGEIGEAGDRGRDGQPGGRGAPGPRGKPGL 688

Query: 138 --------------EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD------ 177
                         E G PG +G PG  G PGD G+ G +G MG PG  G+ GD      
Sbjct: 689 PGNPGLRGDTGVPGEDGKPGEIGVPGAPGNPGDIGQPGSQGPMGKPGNPGMQGDVGPKGF 748

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
           +G RGP+G  G  G+IG  G+ G  GE G  G+PG  G  GIPG  GLPG  G  G  G 
Sbjct: 749 KGARGPRGRPGKIGQIGEIGKKGESGEKGDQGLPGLQGAIGIPGNQGLPGLAGSAGEQGP 808

Query: 238 NGEK---GMTGPRGNRGKSGINGVPGTPA 263
            G     G  GP+G++G+SG +G PG+P 
Sbjct: 809 QGPPGPDGKLGPKGDKGRSGPDGRPGSPG 837



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/107 (49%), Positives = 64/107 (59%), Gaps = 6/107 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGP---KGD 165
            PG+ GP G+KGE G  G++GVKG +G     G PGV G  GP G PG +G++G    KGD
Sbjct: 938  PGVPGPRGEKGEKGPSGDVGVKGAKGNVGPAGEPGVRGDRGPSGEPGTDGEKGENGIKGD 997

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
             G PGP G  GD G  G +GD G  G +G  GR G  G  GL G+PG
Sbjct: 998  EGSPGPTGATGDRGDNGQRGDQGDTGYMGFKGRKGPTGPKGLKGMPG 1044



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 87/183 (47%), Gaps = 30/183 (16%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L  + G   +T E    G +G  G+ G  GA G+ G  G+ G++GAPG+ G  G  G PG
Sbjct: 487 LRGIPGLQGATGEKGDKGFKGNKGEIGFDGAPGDKGETGDVGDQGAPGLPGKQGEAGEPG 546

Query: 156 DEGKRGPKGDMGYPG---PQG------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           ++G RG +G +G PG   PQG       PG  G RG  G  G PG  G  G  G PG PG
Sbjct: 547 EQGNRGAQGFVGLPGAPGPQGRQGKRGTPGTPGSRGADGLPGRPGERGYSGEQGTPGSPG 606

Query: 207 LDGIPGRNGMDG------------IPGKDG---------LPGKDGIPGTNGTNGEKGMTG 245
           + G PGR G  G            +PG+ G         +PG  G PG  G  GE G  G
Sbjct: 607 VIGEPGRKGPPGKQGQKGAQGDIGMPGEAGSPGEIGVAGIPGPQGNPGLPGDEGEIGEAG 666

Query: 246 PRG 248
            RG
Sbjct: 667 DRG 669



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 102/247 (41%), Gaps = 57/247 (23%)

Query: 92   SRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIG------------------AKGEMGVK 133
             +I  +  +G      +   PGLQG IG  G  G                    G++G K
Sbjct: 762  GQIGEIGKKGESGEKGDQGLPGLQGAIGIPGNQGLPGLAGSAGEQGPQGPPGPDGKLGPK 821

Query: 134  GERGEKGA---PGVVGPPGPQGI------PGDEGKRGPKGD------------MGYPGPQ 172
            G++G  G    PG  G PGP GI      PG +G RGP+G             +G PG  
Sbjct: 822  GDKGRSGPDGRPGSPGRPGPDGINGVNGQPGKDGSRGPQGHQGPRGKQGNIGPIGLPGTS 881

Query: 173  GIPGDEGKRGPKGD------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+PG  G RGP GD            +G  G++G  G  G  G  G +G PGRNG  G+P
Sbjct: 882  GMPGLPGPRGPTGDNGADGSDGSDGDIGDDGQVGSQGPQGEAGADGSNGAPGRNGNPGVP 941

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGP------RGNRGKSGINGVPGTPAICAYKRESCSL 274
            G  G  G+ G  G  G  G KG  GP      RG+RG SG  G  G       K +  S 
Sbjct: 942  GPRGEKGEKGPSGDVGVKGAKGNVGPAGEPGVRGDRGPSGEPGTDGEKGENGIKGDEGSP 1001

Query: 275  LPNSETS 281
             P   T 
Sbjct: 1002 GPTGATG 1008



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 86/190 (45%), Gaps = 33/190 (17%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S     P G+ G  GQ G+ G++G  G +G RG++G  G +G PG  G+PG  G R
Sbjct: 831  GRPGSPGRPGPDGINGVNGQPGKDGSRGPQGHQGPRGKQGNIGPIGLPGTSGMPGLPGPR 890

Query: 161  GPKGD---------------------------------MGYPGPQGIPGDEGKRGPKGDM 187
            GP GD                                  G PG  G PG  G RG KG+ 
Sbjct: 891  GPTGDNGADGSDGSDGDIGDDGQVGSQGPQGEAGADGSNGAPGRNGNPGVPGPRGEKGEK 950

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G  G +G+ G  G  G  G  G+ G  G  G PG DG  G++GI G  G+ G  G TG R
Sbjct: 951  GPSGDVGVKGAKGNVGPAGEPGVRGDRGPSGEPGTDGEKGENGIKGDEGSPGPTGATGDR 1010

Query: 248  GNRGKSGING 257
            G+ G+ G  G
Sbjct: 1011 GDNGQRGDQG 1020



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 76/149 (51%), Gaps = 15/149 (10%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            ++G++G  G  G  G  GAPG  G PG  G  G++G++GP GD+G             +G
Sbjct: 913  QVGSQGPQGEAGADGSNGAPGRNGNPGVPGPRGEKGEKGPSGDVGV------------KG 960

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTNG 239
             KG++G  G  G+ G  G  GEPG DG  G NG+   +G PG  G  G  G  G  G  G
Sbjct: 961  AKGNVGPAGEPGVRGDRGPSGEPGTDGEKGENGIKGDEGSPGPTGATGDRGDNGQRGDQG 1020

Query: 240  EKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            + G  G +G +G +G  G+ G P I   +
Sbjct: 1021 DTGYMGFKGRKGPTGPKGLKGMPGIIGEQ 1049



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 74/143 (51%), Gaps = 12/143 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QGP   +GE GA G  G  G  G  G PG  G  G +G  GD G +G KG++   GP 
Sbjct: 915  GSQGP---QGEAGADGSNGAPGRNGNPGVPGPRGEKGEKGPSGDVGVKGAKGNV---GPA 968

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G PG  G RGP G+   PG  G  G +G+ G+   +G PG  G  G  G +G  G  G  
Sbjct: 969  GEPGVRGDRGPSGE---PGTDGEKGENGIKGD---EGSPGPTGATGDRGDNGQRGDQGDT 1022

Query: 233  GTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G KG TGP+G +G  GI
Sbjct: 1023 GYMGFKGRKGPTGPKGLKGMPGI 1045



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 86/211 (40%), Gaps = 71/211 (33%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
           G +G I  KGE GAKG++   GE G+ G  G+ G  G +G+ GDEGK G +GD       
Sbjct: 19  GGEGTIAPKGEKGAKGDV---GEPGDVGITGLAGDAGSRGLEGDEGKDGEEGDEGDIGPP 75

Query: 166 -------------------------------------------MGYPGPQGIPGDEGKRG 182
                                                       G  GP+G+ GD G  G
Sbjct: 76  GPPGVAGGNQTTVVVIYGPPGPPGNQGPIGPPGPKGFNGETGETGISGPRGLTGDPGNVG 135

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------------RNGMDGIPGKDGLPGKDG 230
           PKG  G       DGR+G  GEPG  G+ G            + G+ G+ G+ G PG  G
Sbjct: 136 PKGLRGK------DGREGQKGEPGSKGLMGVTGNPGPSGPPGQRGIKGVKGELGEPGPKG 189

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G NGE G  G  G +G +G  G  GT
Sbjct: 190 AKGDVGQNGEAGENGLPGIKGDTGARGPNGT 220


>gi|334324015|ref|XP_001373069.2| PREDICTED: collagen alpha-1(XIX) chain-like [Monodelphis domestica]
          Length = 1253

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 85/166 (51%), Gaps = 31/166 (18%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GE G KG  G+KGE G+ G PG++G P   G QG  G  G RGP G++G PG  GIPG +
Sbjct: 607 GEFGIKGSPGMKGEPGDPGLPGLLGNPGIKGQQGPAGSMGPRGPPGNIGLPGEHGIPGKQ 666

Query: 179 GKRGPK----------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           G +G K                G+ G PG         LPGEPGLDGIPG  G  G  G+
Sbjct: 667 GIKGEKGDPGGIIGPPGHPGPKGEAGPPGIS-------LPGEPGLDGIPGTPGPRGPKGE 719

Query: 223 DGLPGKDGIPGTN-----GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            GLPG  G+PG       G  G+ G  GP G  G  G  G+PG P 
Sbjct: 720 RGLPGVHGLPGDTGPPGVGIPGQPGSRGPSGEPGIQGPRGLPGLPG 765



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 85/192 (44%), Gaps = 37/192 (19%)

Query: 75  EQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG 134
           E  N    NPW             ++G      E   PGL G +G  G    KG+ G  G
Sbjct: 596 EGLNQVEGNPWGEFG---------IKGSPGMKGEPGDPGLPGLLGNPG---IKGQQGPAG 643

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------------------------GYPG 170
             G +G PG +G PG  GIPG +G +G KGD                         G PG
Sbjct: 644 SMGPRGPPGNIGLPGEHGIPGKQGIKGEKGDPGGIIGPPGHPGPKGEAGPPGISLPGEPG 703

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
             GIPG  G RGPKG+ G PG  GL G  G PG  G+ G PG  G  G PG  G  G  G
Sbjct: 704 LDGIPGTPGPRGPKGERGLPGVHGLPGDTGPPGV-GIPGQPGSRGPSGEPGIQGPRGLPG 762

Query: 231 IPGTNGTNGEKG 242
           +PGT GT+G  G
Sbjct: 763 LPGTPGTDGAPG 774



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 96/238 (40%), Gaps = 80/238 (33%)

Query: 113 GLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPK 163
           G  GP GQKGE G    KGE+G KGE+G+KG PG+ G  G  G+      PG  G++G K
Sbjct: 434 GAPGPPGQKGEHGFEGRKGEVGEKGEQGQKGDPGLGGTHGKDGLKGDLGPPGPRGQKGEK 493

Query: 164 GDMGYP------------GPQGIPGDEGKR------------------------------ 181
           GDMG P            GPQG PG EG+R                              
Sbjct: 494 GDMGPPGPPALIGSLGLEGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGETGQPGFPGSV 553

Query: 182 ---GPKGDMGYPGRIGLDGRDG-------------------------LPGEP-GLDGIPG 212
              G KG+MG  G IG  G  G                         + G P G  GI G
Sbjct: 554 GPKGQKGEMGEQGNIGFQGIKGDKLQDAVACAVATSQQTILAEGLNQVEGNPWGEFGIKG 613

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             GM G PG  GLPG  G PG  G  G  G  GPRG  G  G+ G  G P     K E
Sbjct: 614 SPGMKGEPGDPGLPGLLGNPGIKGQQGPAGSMGPRGPPGNIGLPGEHGIPGKQGIKGE 671



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 93/185 (50%), Gaps = 40/185 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEK-------------------GAPGVVGPP-GPQ 151
           PG  GP GQKGE+G +G +G +G +G+K                   G   V G P G  
Sbjct: 550 PGSVGPKGQKGEMGEQGNIGFQGIKGDKLQDAVACAVATSQQTILAEGLNQVEGNPWGEF 609

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLD 208
           GI G  G +G  GD G PG  G PG +G++GP G MG    PG IGL G  G+PG+ G+ 
Sbjct: 610 GIKGSPGMKGEPGDPGLPGLLGNPGIKGQQGPAGSMGPRGPPGNIGLPGEHGIPGKQGIK 669

Query: 209 G-------------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G              PG  G  G PG   LPG+ G+ G  GT G +   GP+G RG  G+
Sbjct: 670 GEKGDPGGIIGPPGHPGPKGEAGPPGIS-LPGEPGLDGIPGTPGPR---GPKGERGLPGV 725

Query: 256 NGVPG 260
           +G+PG
Sbjct: 726 HGLPG 730



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 72/145 (49%), Gaps = 30/145 (20%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------KRGPKGDM 166
            G  G  G +G  G+KG+RG  G+PG+ G      IPG  G            +RGP GD+
Sbjct: 969  GPMGLPGLEGFPGIKGDRGPAGSPGIAG------IPGKSGAPGPPGLPGEPGERGPVGDI 1022

Query: 167  GYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+PGP+      GI G +G  GP+G MG PG  G        GE G  GIPG  G  G  
Sbjct: 1023 GFPGPEGPEGKPGINGKDGSPGPQGPMGRPGDRGPK------GERGDQGIPGDRGPQGER 1076

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTG 245
            GK GLPG  GI G  G  G KG  G
Sbjct: 1077 GKPGLPGVKGIIGPMGPPGNKGSPG 1101



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 65/122 (53%), Gaps = 3/122 (2%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +GE G PG  G PGP+   G++G++G  G +G PGP G  G+ G  G KG++G  G  G 
Sbjct: 406 KGEAGLPGAAGLPGPR---GEKGEQGQDGLLGAPGPPGQKGEHGFEGRKGEVGEKGEQGQ 462

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  GL G  G DG+ G  G  G  G+ G  G  G PG     G  G+ GP+G  GK G 
Sbjct: 463 KGDPGLGGTHGKDGLKGDLGPPGPRGQKGEKGDMGPPGPPALIGSLGLEGPQGPPGKEGQ 522

Query: 256 NG 257
            G
Sbjct: 523 RG 524



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 3/102 (2%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G PG  G+PG    RG KG+ G  G +G  G  G  GE G +G  G  G  G  G+
Sbjct: 406 KGEAGLPGAAGLPGP---RGEKGEQGQDGLLGAPGPPGQKGEHGFEGRKGEVGEKGEQGQ 462

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G PG  G  G +G  G+ G  GPRG +G+ G  G PG PA+
Sbjct: 463 KGDPGLGGTHGKDGLKGDLGPPGPRGQKGEKGDMGPPGPPAL 504



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 63/139 (45%), Gaps = 36/139 (25%)

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---------------RGPKGDMG 188
             VG PGP G+PG EG  G KGD G  G  GI G  GK               RGP GD+G
Sbjct: 964  AVGEPGPMGLPGLEGFPGIKGDRGPAGSPGIAGIPGKSGAPGPPGLPGEPGERGPVGDIG 1023

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTG 245
            +PG  G +G+ G                  I GKDG PG  G    PG  G  GE+G  G
Sbjct: 1024 FPGPEGPEGKPG------------------INGKDGSPGPQGPMGRPGDRGPKGERGDQG 1065

Query: 246  PRGNRGKSGINGVPGTPAI 264
              G+RG  G  G PG P +
Sbjct: 1066 IPGDRGPQGERGKPGLPGV 1084



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 38/67 (56%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GP GIPG EG +G KG+ GYPG  G  GDEG +G  G  G PG IG  G  G  G PG  
Sbjct: 844 GPPGIPGREGPKGSKGERGYPGLSGEKGDEGLQGIPGTPGAPGPIGPTGPLGRTGHPGPA 903

Query: 209 GIPGRNG 215
           G  G  G
Sbjct: 904 GAKGEKG 910



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           KG+ G PG  GL G  G  GE G DG+ G  G  G  G+ G  G+ G  G  G  G+KG 
Sbjct: 406 KGEAGLPGAAGLPGPRGEKGEQGQDGLLGAPGPPGQKGEHGFEGRKGEVGEKGEQGQKGD 465

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVV 303
            G  G  GK G+ G  G P     K E   + P         PP ++GS  +        
Sbjct: 466 PGLGGTHGKDGLKGDLGPPGPRGQKGEKGDMGPPG-------PPALIGSLGLEGPQGPPG 518

Query: 304 REGDNVR 310
           +EG   R
Sbjct: 519 KEGQRGR 525



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 85/220 (38%), Gaps = 69/220 (31%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRG 161
           E  PPG+  P G+ G  G  G  G +G +GE+G PGV       GPPG  GIPG  G RG
Sbjct: 690 EAGPPGISLP-GEPGLDGIPGTPGPRGPKGERGLPGVHGLPGDTGPPG-VGIPGQPGSRG 747

Query: 162 PKGDMGYPGPQ------GIPGDEGKRGPK------------------GDMG--------- 188
           P G+ G  GP+      G PG +G  G                    GD+G         
Sbjct: 748 PSGEPGIQGPRGLPGLPGTPGTDGAPGRDGKPGMPGPPGDPIALPLLGDIGAMLKNVCGS 807

Query: 189 -YPGRIGLD------------------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLP--- 226
            +P   GL                      G  G  G  GIPGR G  G  G+ G P   
Sbjct: 808 CHPSVPGLKVAKGEEGGAGEPGRHYYAAGKGDTGSRGPPGIPGREGPKGSKGERGYPGLS 867

Query: 227 ------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                 G  GIPGT G  G  G TGP G  G  G  G  G
Sbjct: 868 GEKGDEGLQGIPGTPGAPGPIGPTGPLGRTGHPGPAGAKG 907



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G KGE G  G  G KG+ G +G PG  G PGP       G  GP G  G+PGP
Sbjct: 849 PGREGPKGSKGERGYPGLSGEKGDEGLQGIPGTPGAPGPI------GPTGPLGRTGHPGP 902

Query: 172 QGIPGDEG 179
            G  G++G
Sbjct: 903 AGAKGEKG 910



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 44/83 (53%), Gaps = 6/83 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYP 169
            G  GP G +G+ G  G+ G  G +G  G PG  GP G    QGIPGD G +G +G  G P
Sbjct: 1023 GFPGPEGPEGKPGINGKDGSPGPQGPMGRPGDRGPKGERGDQGIPGDRGPQGERGKPGLP 1082

Query: 170  GPQGI---PGDEGKRGPKGDMGY 189
            G +GI    G  G +G  G  GY
Sbjct: 1083 GVKGIIGPMGPPGNKGSPGTPGY 1105


>gi|355754805|gb|EHH58706.1| Collagen alpha-1(IV) chain, partial [Macaca fascicularis]
          Length = 1645

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 101/199 (50%), Gaps = 28/199 (14%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA--PGVVGPPGPQGI- 153
            V   G   +  E   PG+ GP G  G  G KG  G KG+ G  G   PG+ G  G QGI 
Sbjct: 989  VGGMGLPGTPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIA 1048

Query: 154  --PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
              PG  G++G KG +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIP
Sbjct: 1049 GFPGSPGEKGEKGSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIP 1105

Query: 212  GRNGMDGIP---------GKDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRG 251
            G  G  G+P         G+ G PG DGIPG+ G  GE G+            G +G++G
Sbjct: 1106 GVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKG 1165

Query: 252  KSGINGVPGTPAICAYKRE 270
            + G  G+ G+P I   K E
Sbjct: 1166 EVGFPGLAGSPGIPGSKGE 1184



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 839 PGQQGSPGIPGFPGSKGEMGVMGTPGQPGSPGPVGVPG---LPGE------KGDHGFPGS 889

Query: 172 QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
            G  GD G +G KGD+G PG+                        IG  G  G  G+PG 
Sbjct: 890 SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 949

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 950 PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 999



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 91/196 (46%), Gaps = 38/196 (19%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 936  GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 995

Query: 167  ---------GYPGPQGIPGDEGKRGPKGDM-----------GYPGRIGLDGRDGLPGEP- 205
                     G PGPQG PG +G++G KG             G PG  G  G  G PG P 
Sbjct: 996  GTPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIAGFPGSPG 1055

Query: 206  --------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                    G+ G+PG  G+ G PG  G PG  G+PG  G  G  G+ G  G +G++G+ G
Sbjct: 1056 EKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPG 1115

Query: 258  VPGTPAICAYKRESCS 273
             PG       K E  S
Sbjct: 1116 TPGPTGPAGQKGEPGS 1131



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 93/185 (50%), Gaps = 35/185 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVG-P--PGPQGI 153
            PG  G  GQ G+ G KG+ G+ G  G  G                PG  G P  PGPQG 
Sbjct: 953  PGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGS 1012

Query: 154  PGDEGKRGPKGDMGYPGPQ--GIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEP 205
            PG +G++G KG  G  GP   GIPG  G++G +G  G+PG  G  G        G+PG P
Sbjct: 1013 PGLQGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSP 1072

Query: 206  GLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGIN 256
            GL G PG  G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G +
Sbjct: 1073 GLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSD 1132

Query: 257  GVPGT 261
            G+PG+
Sbjct: 1133 GIPGS 1137



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 84/170 (49%), Gaps = 24/170 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGP 162
            PG  GP+G  G  G KG+ G  G  G +G PG+ G  G  G+PG  G          +G 
Sbjct: 866  PGSPGPVGVPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQ 925

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-- 220
            KGD G    +G  G  G++G +GD G PG  G DG+ G PG+PG  G PG +G  G P  
Sbjct: 926  KGDQGE---KGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGL 982

Query: 221  ----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      G  G PG+ G+PG  G  G  G+ G +G +G  G  G PG
Sbjct: 983  PGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGPPG 1032



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 89/179 (49%), Gaps = 31/179 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMGY 168
           PGL  P G KG+ G++G  GV G+ G  G PG  G PG  G PG +G+ G     G  G 
Sbjct: 810 PGLDMP-GPKGDKGSQGLPGVTGQSGLPGLPGQQGSPGIPGFPGSKGEMGVMGTPGQPGS 868

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD---------- 217
           PGP G+PG  G+   KGD G+PG  G  G  GL G+ G  G+PG+ G MD          
Sbjct: 869 PGPVGVPGLPGE---KGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQ 925

Query: 218 -------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                        G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 926 KGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 984



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 96/220 (43%), Gaps = 38/220 (17%)

Query: 44   KGDIFDNSVPQTPHVEFVP--------PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIP 95
            KG +    +P TP  + VP        P L  E   +  + Q                 P
Sbjct: 986  KGSVGGMGLPGTPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGP--------------P 1031

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
             + + G      +    G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG
Sbjct: 1032 GIGIPGLPGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPG 1091

Query: 156  DEGKRG-------P--KGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            ++G +G       P  KG+ G PG   P G     G++G  G  G PG  G  G  GLPG
Sbjct: 1092 EKGDKGLPGLDGIPGVKGEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPG 1148

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
              G  G PG  G  G  G+ G PG  G PG  G+ GE+G 
Sbjct: 1149 R-GFPGFPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGF 1187



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 60/114 (52%), Gaps = 17/114 (14%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           +KG+   KGE G KGE G +G PGV      G PGP+G PG +G +G KG  G+PG  G 
Sbjct: 226 EKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGY 285

Query: 175 PGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGEPGLDGIPGRNGM 216
           PG  G++GP+G+ G              G +G  G  G PG PG  G PG  G 
Sbjct: 286 PGLVGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGPKGF 339



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 90/197 (45%), Gaps = 54/197 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG  GP GQKGE G+ G  G  GE+GE G PG   P    G PG +G +G KG++G+PG 
Sbjct: 1117 PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGFPGL 1172

Query: 171  --PQGIPGDEGKRG-----------------------PKGD---------------MGYP 190
                GIPG +G++G                       PKGD               MG P
Sbjct: 1173 AGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPP 1232

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPR 247
            G  G+DG  G  G PG  G PG      +PG  G PG  G+PG  G+    G KG  GP 
Sbjct: 1233 GLPGIDGVKGDKGNPGWPGAPG------VPGPKGDPGFQGMPGIGGSPGITGSKGDMGPP 1286

Query: 248  GNRGKSGINGVPGTPAI 264
            G  G  G  GVPG   I
Sbjct: 1287 GVPGFQGPKGVPGLQGI 1303



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 65/130 (50%), Gaps = 27/130 (20%)

Query: 157 EGKRGPKGDMGYPGPQGIPGD-----------EGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           +G +G KGD G  GP G+PG            +G++G KG+ G+ G  G+ G  G PG+P
Sbjct: 201 QGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGV-GEKGEPGKP 259

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKG------------MTGPRGNR 250
           G  G PG++G  G  G  G PG+ G P   G  G  GEKG             TGP G +
Sbjct: 260 GPRGKPGKDGDKGEKGSPGFPGEPGYPGLVGRQGPQGEKGEAGPPGPPGIVIGTGPLGEK 319

Query: 251 GKSGINGVPG 260
           G+ G  G PG
Sbjct: 320 GERGYPGTPG 329



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 54/105 (51%), Gaps = 17/105 (16%)

Query: 123 EIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI----- 174
           EIG  G+ G KG+RG     G  GV   PGPQG PG  G+ G KG+ G      I     
Sbjct: 463 EIGFPGQPGAKGDRGLPGRDGVAGV---PGPQGTPGLIGQPGAKGEPGE-----IYFDLR 514

Query: 175 -PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GD+G  G  G  G PGR G  GRDG PG PG  G PG  G+ G
Sbjct: 515 LKGDKGDPGFPGQPGMPGRAGSPGRDGRPGLPGPKGSPGSVGLKG 559



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 61/145 (42%), Gaps = 52/145 (35%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 620 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 679

Query: 184 KGDM------------GYPGR-----------IGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GDM            G PG            +GL G  GLPG PG+ G PG  G  G+P
Sbjct: 680 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVP 739

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTG 245
                    GIPG +G  G  G+ G
Sbjct: 740 ---------GIPGEHGAIGPPGLQG 755


>gi|348511671|ref|XP_003443367.1| PREDICTED: collagen alpha-1(XVIII) chain-like [Oreochromis
           niloticus]
          Length = 1572

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 81/172 (47%), Gaps = 38/172 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GP G+ G  G  G  G+ G  G+ GAPG     G  G  G+PG  G++G +G+ G PG Q
Sbjct: 750 GPPGKDGAPGKPGLPGIPGTDGKPGAPGPNGEKGDAGELGLPGAIGEKGAQGERGLPGTQ 809

Query: 173 GIPG------------------------------DEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G PG                               EG  G     G+ GR G+ G DG+ 
Sbjct: 810 GEPGLAGLPGPRGPVGPPGPPGPPGPSYRVGFDDMEGSAG-----GFNGRPGIGGPDGIQ 864

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G PGL G PG  G +G  G+DG PG DG PG  G+ G++G  G RG  G+ G
Sbjct: 865 GNPGLPGRPGEKGDEGPAGRDGQPGLDGFPGPPGSKGDRGDNGERGEPGRDG 916



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 72/202 (35%), Gaps = 77/202 (38%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------ 164
            P G+QG  G  G  G KG+ G  G  G+ G  G  GPPG +G  GD G+RG  G      
Sbjct: 860  PDGIQGNPGLPGRPGEKGDEGPAGRDGQPGLDGFPGPPGSKGDRGDNGERGEPGRDGTGL 919

Query: 165  --------------------------------------DMGYPGPQGIPGDEGKRGPKGD 186
                                                    G+PGP          GPKGD
Sbjct: 920  PGPPGPPGPPGQIVYQTSGNFDEVVGRAGPQGGPGLPGRAGFPGPM---------GPKGD 970

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD-GIPGKD---------------------- 223
             G PG  G  G  G  GEPGL   P  N ++   P  D                      
Sbjct: 971  RGDPGPPGY-GEKGEKGEPGLVIGPDGNFLNLAQPKGDRGLPGPVGPPGPYGPPGLKGEI 1029

Query: 224  GLPGKDGIPGTNGTNGEKGMTG 245
            G+PG+ G PG NG  GEKG  G
Sbjct: 1030 GMPGRPGRPGINGYKGEKGEPG 1051


>gi|268573586|ref|XP_002641770.1| C. briggsae CBR-EMB-9 protein [Caenorhabditis briggsae]
          Length = 1759

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/165 (47%), Positives = 95/165 (57%), Gaps = 8/165 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK--GAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            PGLQG  GQ G IG  G+ G  G  G+   G PG  G  G  G+ G  G  G  G+ G P
Sbjct: 1244 PGLQGRDGQTGPIGPPGDDGYPGAPGQDTYGQPGQAGQDGYPGLDGLPGSPGLNGEPGTP 1303

Query: 170  GPQGIPGDEGKRGPKGDMGYPGR---IGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKD 223
            G  G+PG  G  G  G  GYPG    +G+DG+   DGLPG PGLDG+ G  G++G  G+D
Sbjct: 1304 GQYGMPGLPGMPGEPGQTGYPGERGLVGIDGKRGHDGLPGAPGLDGVIGVPGVEGDCGED 1363

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            GLPG  G PG+NG  GE+G+ G  G +G+SG NG PG P     K
Sbjct: 1364 GLPGLPGAPGSNGYPGERGLPGVPGQQGRSGDNGYPGQPGQPGLK 1408



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/188 (43%), Positives = 98/188 (52%), Gaps = 20/188 (10%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGD 156
            QGF  +  +   PG QG  G+KG  G  GE G+ G RG+ G PG+ G     G  G PG 
Sbjct: 1142 QGFPGAPGQPGYPGQQGREGEKGYPGMPGENGLSGLRGQDGLPGLKGENGLDGQPGYPGA 1201

Query: 157  EGKRGPKGDMGYPGPQGIPGD------EGKRGPKGDMGYPGRIGLDGRDGLP---GEPGL 207
             G+ G  GD+GYPG  G  GD      +G+ G +G+ G PG  GL GRDG     G PG 
Sbjct: 1202 PGQLGTPGDVGYPGAPGENGDNGLQGRDGQPGLRGEPGQPGMPGLQGRDGQTGPIGPPGD 1261

Query: 208  DGIPGRNGMD-----GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            DG PG  G D     G  G+DG PG DG+PG+ G NGE G     G  G  G+ G+PG P
Sbjct: 1262 DGYPGAPGQDTYGQPGQAGQDGYPGLDGLPGSPGLNGEPGTP---GQYGMPGLPGMPGEP 1318

Query: 263  AICAYKRE 270
                Y  E
Sbjct: 1319 GQTGYPGE 1326



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 116/250 (46%), Gaps = 28/250 (11%)

Query: 44   KGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFC 103
            +G+  +   P  P     P    ++ RE EK        N    L     +P +  +   
Sbjct: 1136 EGECGEQGFPGAPGQPGYP---GQQGREGEKGYPGMPGENGLSGLRGQDGLPGLKGENGL 1192

Query: 104  NSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            +    Y  PG  G +G  G++G   A GE G  G +G  G PG+ G PG  G+PG +G+ 
Sbjct: 1193 DGQPGY--PGAPGQLGTPGDVGYPGAPGENGDNGLQGRDGQPGLRGEPGQPGMPGLQGRD 1250

Query: 161  G------PKGDMGYPGPQGI-----PGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PG 206
            G      P GD GYPG  G      PG  G+ G  G  G PG  GL+G  G PG+   PG
Sbjct: 1251 GQTGPIGPPGDDGYPGAPGQDTYGQPGQAGQDGYPGLDGLPGSPGLNGEPGTPGQYGMPG 1310

Query: 207  LDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            L G+PG  G  G PG+      DG  G DG+PG  G +G  G+ G  G+ G+ G+ G+PG
Sbjct: 1311 LPGMPGEPGQTGYPGERGLVGIDGKRGHDGLPGAPGLDGVIGVPGVEGDCGEDGLPGLPG 1370

Query: 261  TPAICAYKRE 270
             P    Y  E
Sbjct: 1371 APGSNGYPGE 1380



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 87/163 (53%), Gaps = 21/163 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ G  G+ G+ G +G+ GV G RGE GAPG  G  G  G PGD G  G  G  GYPGP 
Sbjct: 889  GIDGKKGRDGQPGPRGQDGVPGYRGEAGAPGQNGMDGYPGAPGDNGYPGAPGQDGYPGPN 948

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------------GEPGLDGIPGRNGMDGIP 220
            GIPG++G       +G+PG  G  G +GLP            G  GL G PG  G DG P
Sbjct: 949  GIPGEDGL------VGFPGLRGEHGDNGLPGIEGECGEEGARGTDGLPGYPGEQGQDGHP 1002

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G   LPG DG+PG +G  G+ GM G RG  G+ G    PG P 
Sbjct: 1003 G---LPGADGLPGLSGEPGDSGMPGYRGQPGEPGNLAYPGAPG 1042



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 92/196 (46%), Gaps = 49/196 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G +G+ G  G  GV G+ GE G  G  G PG  G PG+ G   P G +GYPGP
Sbjct: 778 PGLHGEPGMRGQQGEVGFNGVDGDCGEPGLDGYPGQPGAPGAPGETGYGFP-GQVGYPGP 836

Query: 172 QGIPGDEGKRGP---------KGDMGYPGRIGLDGRDGLPGEPGL--------------- 207
            G PG  G  GP          G  GYPG +G++G+DG PG PG                
Sbjct: 837 NGEPGAAGLPGPDGYPGRDGLPGTPGYPGEVGMNGQDGAPGMPGARGESGLVGIDGKKGR 896

Query: 208 ------------------DGIPGRNGMDGIPGKDG------LPGKDGIPGTNGTNGEKGM 243
                              G PG+NGMDG PG  G       PG+DG PG NG  GE G+
Sbjct: 897 DGQPGPRGQDGVPGYRGEAGAPGQNGMDGYPGAPGDNGYPGAPGQDGYPGPNGIPGEDGL 956

Query: 244 TGPRGNRGKSGINGVP 259
            G  G RG+ G NG+P
Sbjct: 957 VGFPGLRGEHGDNGLP 972



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 90/185 (48%), Gaps = 18/185 (9%)

Query: 112 PGLQGPIG----------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
           PG QGP G            G+ G  G  G+ G+RG  G PG+ GP GP G PG  G+RG
Sbjct: 711 PGAQGPRGIPAPLRIVNQVAGQPGVDGMPGLPGDRGADGLPGLPGPVGPDGYPGTPGERG 770

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             G  G+PG  G PG  G++G  G  G  G  G  G DG PG+PG  G PG  G      
Sbjct: 771 MDGLPGFPGLHGEPGMRGQQGEVGFNGVDGDCGEPGLDGYPGQPGAPGAPGETGY----- 825

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA-ICAYKRESCSLLPNSET 280
             G PG+ G PG NG  G  G+ GP G  G+ G+ G PG P  +    ++    +P +  
Sbjct: 826 --GFPGQVGYPGPNGEPGAAGLPGPDGYPGRDGLPGTPGYPGEVGMNGQDGAPGMPGARG 883

Query: 281 SQLLI 285
              L+
Sbjct: 884 ESGLV 888



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 92/170 (54%), Gaps = 11/170 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP+G  G  G  GE G+ G     G PG+ G PG +G  G+ G  G  GD G PG 
Sbjct: 751 PGLPGPVGPDGYPGTPGERGMDGL---PGFPGLHGEPGMRGQQGEVGFNGVDGDCGEPGL 807

Query: 172 QGIPGDEGKRGPKGDMGY--PGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPG---KD 223
            G PG  G  G  G+ GY  PG++G  G +G PG    PG DG PGR+G+ G PG   + 
Sbjct: 808 DGYPGQPGAPGAPGETGYGFPGQVGYPGPNGEPGAAGLPGPDGYPGRDGLPGTPGYPGEV 867

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           G+ G+DG PG  G  GE G+ G  G +G+ G  G  G   +  Y+ E+ +
Sbjct: 868 GMNGQDGAPGMPGARGESGLVGIDGKKGRDGQPGPRGQDGVPGYRGEAGA 917



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 80/137 (58%), Gaps = 3/137 (2%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G+ G +GE G PG+ G  G  G+PG  G  G  G+ G+PG  G PG  G++G +G+ GYP
Sbjct: 1107 GMPGLKGESGLPGLPGRQGQDGLPGAPGLEGECGEQGFPGAPGQPGYPGQQGREGEKGYP 1166

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---NGTNGEKGMTGPR 247
            G  G +G  GL G+ GL G+ G NG+DG PG  G PG+ G PG     G  GE G  G +
Sbjct: 1167 GMPGENGLSGLRGQDGLPGLKGENGLDGQPGYPGAPGQLGTPGDVGYPGAPGENGDNGLQ 1226

Query: 248  GNRGKSGINGVPGTPAI 264
            G  G+ G+ G PG P +
Sbjct: 1227 GRDGQPGLRGEPGQPGM 1243



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/194 (39%), Positives = 96/194 (49%), Gaps = 27/194 (13%)

Query: 112 PGLQGPIGQKGEIG-AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PG +G  G +G++G   GE G +G +G  G  G  G PG  G+PG  G RGP G  G PG
Sbjct: 350 PGFEGDCGPEGQLGEGTGEAGPRGAQGFDGVQGAKGLPGHNGLPGPVGPRGPVGAPGAPG 409

Query: 171 PQGIPGDEG--KRGPKGDMGYP------------GRIGLDGRDGLP-----GEPGLDGIP 211
             GI G  G  ++G +G+ GYP            G  G  G DGLP     G PGLDG  
Sbjct: 410 MPGIDGMPGYTEKGDRGEDGYPGFAGEPGLPGESGDCGYPGEDGLPGYDIQGPPGLDGQS 469

Query: 212 GRNGMDGIPGKDGLP---GKDGIPGTN----GTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           GR+G  GIPG  G P   G+ G PGT     G  G  G+ G  G  G+ G++G PG P  
Sbjct: 470 GRDGFPGIPGDIGDPGYSGEKGFPGTGVNKVGPAGMTGLPGEPGMPGRIGMDGYPGPPGN 529

Query: 265 CAYKRESCSLLPNS 278
              + E C   P+ 
Sbjct: 530 NGERGEDCGYCPDG 543



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 15/154 (9%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G++G+ G  G  G++GE GE+G PG  G PG    PG +G+   +G+ GYPG  
Sbjct: 1116 GLPGLPGRQGQDGLPGAPGLEGECGEQGFPGAPGQPG---YPGQQGR---EGEKGYPG-- 1167

Query: 173  GIPGDEGKRGPKGDMGYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLP 226
             +PG+ G  G +G  G PG     GLDG+ G PG PG  G PG  G  G PG+   +GL 
Sbjct: 1168 -MPGENGLSGLRGQDGLPGLKGENGLDGQPGYPGAPGQLGTPGDVGYPGAPGENGDNGLQ 1226

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+DG PG  G  G+ GM G +G  G++G  G PG
Sbjct: 1227 GRDGQPGLRGEPGQPGMPGLQGRDGQTGPIGPPG 1260



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 88/177 (49%), Gaps = 23/177 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+ G  GQ G  G +G +G+ G+RG  G PG  G  G  G+PG EG     G+ G PG 
Sbjct: 1312 PGMPGEPGQTGYPGERGLVGIDGKRGHDGLPGAPGLDGVIGVPGVEGD---CGEDGLPGL 1368

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PG  G  G +G  G PG+ G  G +G PG+PG  G+ G  G DG PG+DGL   DG+
Sbjct: 1369 PGAPGSNGYPGERGLPGVPGQQGRSGDNGYPGQPGQPGLKGPRGDDGYPGRDGL---DGM 1425

Query: 232  PGTNGT-----------------NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            PG  G                  +G+ G  G +G  G  G NG+PG P    Y   S
Sbjct: 1426 PGRGGPQGLPGPLAMEIRNPPGLSGDNGYPGEKGYPGLPGDNGLPGPPGKAGYPGAS 1482



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 98/186 (52%), Gaps = 20/186 (10%)

Query: 112 PGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQG--IPGDEGKRGPKGDM 166
           PGL G  GQ G  G +GE    G+ G+RG +G+ G+ G  GPQG   PG  G  G KG+ 
Sbjct: 643 PGLPGSPGQDGFPGLRGEPGLSGIDGKRGRQGSLGIPGLQGPQGDSYPGQPGTPGFKGEA 702

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRI--------GLDGRDGLPGEPGLDGIPGRNGM-- 216
           G  G  G+PG +G RG    +  P RI        G+DG  GLPG+ G DG+PG  G   
Sbjct: 703 GANGLPGLPGAQGPRG----IPAPLRIVNQVAGQPGVDGMPGLPGDRGADGLPGLPGPVG 758

Query: 217 -DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
            DG PG  G  G DG+PG  G +GE GM G +G  G +G++G  G P +  Y  +  +  
Sbjct: 759 PDGYPGTPGERGMDGLPGFPGLHGEPGMRGQQGEVGFNGVDGDCGEPGLDGYPGQPGAPG 818

Query: 276 PNSETS 281
              ET 
Sbjct: 819 APGETG 824



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 88/177 (49%), Gaps = 15/177 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ G  G  G  GA+GE G+ G  G+KG  G  GP G  G+PG  G+ G  G  G  G  
Sbjct: 868  GMNGQDGAPGMPGARGESGLVGIDGKKGRDGQPGPRGQDGVPGYRGEAGAPGQNGMDGYP 927

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---------GKD 223
            G PGD G  G  G  GYPG  G+ G DGL G PGL G  G NG+ GI          G D
Sbjct: 928  GAPGDNGYPGAPGQDGYPGPNGIPGEDGLVGFPGLRGEHGDNGLPGIEGECGEEGARGTD 987

Query: 224  GLP------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            GLP      G+DG PG  G +G  G++G  G+ G  G  G PG P   AY      L
Sbjct: 988  GLPGYPGEQGQDGHPGLPGADGLPGLSGEPGDSGMPGYRGQPGEPGNLAYPGAPGDL 1044



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 90/187 (48%), Gaps = 50/187 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G  G+ G  G  G  G  G  GE+G PGV         PG +G+    GD GYP  
Sbjct: 1354 PGVEGDCGEDGLPGLPGAPGSNGYPGERGLPGV---------PGQQGR---SGDNGYP-- 1399

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGR------DGLPG--------EPGL---DGIPGRN 214
             G PG  G +GP+GD GYPGR GLDG        GLPG         PGL   +G PG  
Sbjct: 1400 -GQPGQPGLKGPRGDDGYPGRDGLDGMPGRGGPQGLPGPLAMEIRNPPGLSGDNGYPGEK 1458

Query: 215  GMDGIPGKDGL---PGKDGIPGTNGTN---------------GEKGMTGPRGNRGKSGIN 256
            G  G+PG +GL   PGK G PG +G +               G++G  G RG  G  G+ 
Sbjct: 1459 GYPGLPGDNGLPGPPGKAGYPGASGQDGYPGPPGLPGTPGGLGDQGFQGERGRGGHPGLP 1518

Query: 257  GVPGTPA 263
            G PG P 
Sbjct: 1519 GTPGYPG 1525



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 126/331 (38%), Gaps = 107/331 (32%)

Query: 44  KGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFC 103
           +G +     P  P ++ +P   Y E  +R ++        P           L    G C
Sbjct: 399 RGPVGAPGAPGMPGIDGMP--GYTEKGDRGEDGYPGFAGEPG----------LPGESGDC 446

Query: 104 NSTKE--------YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV----VGPPGPQ 151
               E          PPGL G  G+ G  G  G++G  G  GEKG PG     VGP G  
Sbjct: 447 GYPGEDGLPGYDIQGPPGLDGQSGRDGFPGIPGDIGDPGYSGEKGFPGTGVNKVGPAGMT 506

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP------------KGDMGY---------- 189
           G+PG+ G  G  G  GYPGP   PG+ G+RG              GD+GY          
Sbjct: 507 GLPGEPGMPGRIGMDGYPGP---PGNNGERGEDCGYCPDGLPGNPGDVGYPGMNGYPGPP 563

Query: 190 --------------------PGRIGLDGRDGLPGEPG----------------------- 206
                               PG  G++G  GLPG PG                       
Sbjct: 564 GPNGDHGDCGMPGLPGKPGAPGADGINGSPGLPGIPGYPGMKGEDGEIIGPMENPAGIPG 623

Query: 207 ------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV-- 258
                 L G+PGR G DG+PG  G PG+DG PG  G  G  G+ G RG +G  GI G+  
Sbjct: 624 LKGDRGLPGLPGRQGNDGLPGLPGSPGQDGFPGLRGEPGLSGIDGKRGRQGSLGIPGLQG 683

Query: 259 ------PGTPAICAYKRES-CSLLPNSETSQ 282
                 PG P    +K E+  + LP    +Q
Sbjct: 684 PQGDSYPGQPGTPGFKGEAGANGLPGLPGAQ 714



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 78/182 (42%), Gaps = 47/182 (25%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G KGE G  G  GE G PG  G  GP+G PG  G  G +GD G         D G +G +
Sbjct: 43  GTKGERGNPGFGGEPGHPGAPGQDGPEGAPGASGMFGAEGDFG---------DVGAKGAR 93

Query: 185 GDMGYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIP--------------------- 220
           GD G PG     GL G DGLPG  G +GIPG NG DG P                     
Sbjct: 94  GDRGLPGSPGHPGLQGLDGLPGMKGEEGIPGCNGTDGFPGIPGLAGPPGQPGPNGNQGRP 153

Query: 221 --------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                         G+ G+ G+ G PG  G  G  G  G +G +G  G  G+PG P +  
Sbjct: 154 GIPGPPGEGGVNSQGRKGVKGESGRPGVPGLPGNSGYPGLKGAKGDPGPYGLPGFPGVGG 213

Query: 267 YK 268
            K
Sbjct: 214 LK 215



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 93/209 (44%), Gaps = 56/209 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------------------- 149
            PG QG  G  G  GA G  G+ GE G+ G PG  G PG                      
Sbjct: 993  PGEQGQDGHPGLPGADGLPGLSGEPGDSGMPGYRGQPGEPGNLAYPGAPGDLGYPGPDGP 1052

Query: 150  -----PQGIPGDEGKRGPKGDM--GYPGPQGIPGDE------------------GKRGPK 184
                 P G+PG  G+RG  GD   G PG  G PGD                   G  G K
Sbjct: 1053 PGLAGPDGLPGLNGERGEVGDSYPGNPGLSGQPGDAGYDGLDGVPGPPGYPGITGMPGLK 1112

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---------GIPGTN 235
            G+ G PG  G  G+DGLPG PGL+G  G  G  G PG+ G PG+          G+PG N
Sbjct: 1113 GESGLPGLPGRQGQDGLPGAPGLEGECGEQGFPGAPGQPGYPGQQGREGEKGYPGMPGEN 1172

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G +G +G  G  G +G++G++G PG P  
Sbjct: 1173 GLSGLRGQDGLPGLKGENGLDGQPGYPGA 1201



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 79/166 (47%), Gaps = 15/166 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGLQGP G     G  G  G KGE G  G PG+ G  GP+GIP     R      G PG 
Sbjct: 679 PGLQGPQGDS-YPGQPGTPGFKGEAGANGLPGLPGAQGPRGIPAP--LRIVNQVAGQPGV 735

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G+PG  G RG  G  G PG +G DG  G PGE G+DG+PG       PG        G 
Sbjct: 736 DGMPGLPGDRGADGLPGLPGPVGPDGYPGTPGERGMDGLPG------FPGL------HGE 783

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           PG  G  GE G  G  G+ G+ G++G PG P       E+    P 
Sbjct: 784 PGMRGQQGEVGFNGVDGDCGEPGLDGYPGQPGAPGAPGETGYGFPG 829



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 99/228 (43%), Gaps = 71/228 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGV-----------KGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
           GL GP+G +G +GA G  G+           KG+RGE G PG  G PG   +PG+ G  G
Sbjct: 391 GLPGPVGPRGPVGAPGAPGMPGIDGMPGYTEKGDRGEDGYPGFAGEPG---LPGESGDCG 447

Query: 162 PKGDMGYPG------PQ-----------GIPGDEGKRGPKGDMGYPG----RIGLDGRDG 200
             G+ G PG      P            GIPGD G  G  G+ G+PG    ++G  G  G
Sbjct: 448 YPGEDGLPGYDIQGPPGLDGQSGRDGFPGIPGDIGDPGYSGEKGFPGTGVNKVGPAGMTG 507

Query: 201 LPGEPGLDGIPGRNGMDGIPGK---------------DGLPGKDGIPG------------ 233
           LPGEPG+   PGR GMDG PG                DGLPG  G  G            
Sbjct: 508 LPGEPGM---PGRIGMDGYPGPPGNNGERGEDCGYCPDGLPGNPGDVGYPGMNGYPGPPG 564

Query: 234 ---TNGTNGEKGMTGPRGNRGKSGING---VPGTPAICAYKRESCSLL 275
               +G  G  G+ G  G  G  GING   +PG P     K E   ++
Sbjct: 565 PNGDHGDCGMPGLPGKPGAPGADGINGSPGLPGIPGYPGMKGEDGEII 612



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 69/140 (49%), Gaps = 24/140 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G  G  G+ G  G  G  G+ G  GAPG  G PGP GIPG++G       +G+P  
Sbjct: 909  PGYRGEAGAPGQNGMDGYPGAPGDNGYPGAPGQDGYPGPNGIPGEDGL------VGFP-- 960

Query: 172  QGIPGDEGKRGPKGDMGYPGRI---------GLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
                   G RG  GD G PG           G DG  G PGE G DG PG  G DG+PG 
Sbjct: 961  -------GLRGEHGDNGLPGIEGECGEEGARGTDGLPGYPGEQGQDGHPGLPGADGLPGL 1013

Query: 223  DGLPGKDGIPGTNGTNGEKG 242
             G PG  G+PG  G  GE G
Sbjct: 1014 SGEPGDSGMPGYRGQPGEPG 1033



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 85/205 (41%), Gaps = 68/205 (33%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGDEGKRGPKGDMGYPG-- 170
            G  G  G  GE+G+ G PG+   PG  G+            PG  G+ G  G++ YPG  
Sbjct: 985  GTDGLPGYPGEQGQDGHPGL---PGADGLPGLSGEPGDSGMPGYRGQPGEPGNLAYPGAP 1041

Query: 171  ----------------PQGIPGDEGKRGPKGD--------MGYPGRIGLDGRD------- 199
                            P G+PG  G+RG  GD         G PG  G DG D       
Sbjct: 1042 GDLGYPGPDGPPGLAGPDGLPGLNGERGEVGDSYPGNPGLSGQPGDAGYDGLDGVPGPPG 1101

Query: 200  --------GLPGEPGLDGIPGRNGMDGIPGKDGL------------PGKDGIPGTNGTNG 239
                    GL GE GL G+PGR G DG+PG  GL            PG+ G PG  G  G
Sbjct: 1102 YPGITGMPGLKGESGLPGLPGRQGQDGLPGAPGLEGECGEQGFPGAPGQPGYPGQQGREG 1161

Query: 240  EKGMTGPRGNRGKSGINGVPGTPAI 264
            EKG  G  G  G SG+ G  G P +
Sbjct: 1162 EKGYPGMPGENGLSGLRGQDGLPGL 1186



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 83/181 (45%), Gaps = 39/181 (21%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGE---IGAKGE---MGVKGERGEKGAPGVVGPPGPQ--- 151
           GF         PG  GP G  G     GA+G+   +G KG RG++G PG  G PG Q   
Sbjct: 52  GFGGEPGHPGAPGQDGPEGAPGASGMFGAEGDFGDVGAKGARGDRGLPGSPGHPGLQGLD 111

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPG-----------------------------DEGKRG 182
           G+PG +G+ G  G  G  G  GIPG                              +G++G
Sbjct: 112 GLPGMKGEEGIPGCNGTDGFPGIPGLAGPPGQPGPNGNQGRPGIPGPPGEGGVNSQGRKG 171

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            KG+ G PG  GL G  G PG  G  G PG  G+ G PG  GL G+ G+  T+G  GEKG
Sbjct: 172 VKGESGRPGVPGLPGNSGYPGLKGAKGDPGPYGLPGFPGVGGLKGRMGMR-TSGVKGEKG 230

Query: 243 M 243
           +
Sbjct: 231 L 231



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 80/187 (42%), Gaps = 52/187 (27%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           ++G  GVKGE G  G PG         +PG+ G  G KG  G PGP G+PG  G  G KG
Sbjct: 166 SQGRKGVKGESGRPGVPG---------LPGNSGYPGLKGAKGDPGPYGLPGFPGVGGLKG 216

Query: 186 DMGYPGRI-GLDGRDGLP-------------------------------------GEPGL 207
            MG   R  G+ G  GLP                                     G  G 
Sbjct: 217 RMGM--RTSGVKGEKGLPGPPGPPGPPGSYPWASKPIEMEVLQGPVGPGGVKGEKGRDGP 274

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAI 264
            G PG  G+DG PG  GL G+ G PG  G  G++   G++G  G +G  G  GVPGTP  
Sbjct: 275 VGPPGMLGLDGPPGYPGLKGQKGDPGDAGQRGKRGKDGVSGSYGEKGTQGEQGVPGTPGY 334

Query: 265 CAYKRES 271
              K E+
Sbjct: 335 PGTKGEA 341



 Score = 43.1 bits (100), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 62/142 (43%), Gaps = 38/142 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP------GVVGPPGPQGIPGD-----EGKR 160
            PG QG  G  G  G  G+ G+KG RG+ G P      G+ G  GPQG+PG          
Sbjct: 1387 PGQQGRSGDNGYPGQPGQPGLKGPRGDDGYPGRDGLDGMPGRGGPQGLPGPLAMEIRNPP 1446

Query: 161  GPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLD--------------------- 196
            G  GD GYPG +   G+PGD G  GP G  GYPG  G D                     
Sbjct: 1447 GLSGDNGYPGEKGYPGLPGDNGLPGPPGKAGYPGASGQDGYPGPPGLPGTPGGLGDQGFQ 1506

Query: 197  ---GRDGLPGEPGLDGIPGRNG 215
               GR G PG PG  G PG  G
Sbjct: 1507 GERGRGGHPGLPGTPGYPGSPG 1528



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPG 227
            PG +G+RG  G  G PG  G  G+DG  G PG  G+ G        G  G  G  GLPG
Sbjct: 41  CPGTKGERGNPGFGGEPGHPGAPGQDGPEGAPGASGMFGAEGDFGDVGAKGARGDRGLPG 100

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
             G PG  G +G  GM G  G  G +G +G PG P + 
Sbjct: 101 SPGHPGLQGLDGLPGMKGEEGIPGCNGTDGFPGIPGLA 138



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 45/85 (52%)

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           ++G  G +G PG +GLDG  G PG  G  G PG  G  G  GKDG+ G  G  GT G  G
Sbjct: 268 EKGRDGPVGPPGMLGLDGPPGYPGLKGQKGDPGDAGQRGKRGKDGVSGSYGEKGTQGEQG 327

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  G +G++G  G PG P  
Sbjct: 328 VPGTPGYPGTKGEAGEPGYPGRPGF 352


>gi|350416747|ref|XP_003491083.1| PREDICTED: collagen alpha-1(XXIV) chain-like isoform 2 [Bombus
           impatiens]
          Length = 892

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 94/194 (48%), Gaps = 48/194 (24%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDMGYPGPQG 173
           QKG  G +GE G +G++GEKG PG  G PG  G PG EG+ G      PKG++G+PG   
Sbjct: 396 QKGAKGEQGERGDEGKQGEKGEPGERGSPGQDGSPGSEGRSGLPGFPGPKGEIGFPG--- 452

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------------------NG 215
           +PG +G +G +G+ G  G  G+ G+ G  GEPG DG+PG                    G
Sbjct: 453 VPGPQGLQGLRGEAGAQGSPGIQGQKGEAGEPGRDGLPGSMVGSILPGPPGPEGPPGSPG 512

Query: 216 MDGIP------------------GKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSG 254
            DG+P                  GKDG PG  G PG  G+    GE G  GPRG  G  G
Sbjct: 513 EDGLPGVKGEPGPVGPPGLPGLQGKDGAPGSLGPPGLQGSPGLPGEPGAPGPRGIEGAIG 572

Query: 255 INGVPGTPAICAYK 268
             G+PG     A K
Sbjct: 573 KPGLPGLDGRSAEK 586



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 96/219 (43%), Gaps = 40/219 (18%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
           +QG   +     PPGLQG  G  GE GA G  G++G  G+ G PG+ G    +G  G +G
Sbjct: 534 LQGKDGAPGSLGPPGLQGSPGLPGEPGAPGPRGIEGAIGKPGLPGLDGRSAEKGDRGQQG 593

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKG------------------------DM------- 187
           ++GP G  G PG  G PG  G  G  G                        DM       
Sbjct: 594 EQGPVGPRGLPGSVGAPGLPGVAGIPGLEGRPGPPGAPGPPGPAGPPGTISDMLSTNNVL 653

Query: 188 ---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
              G PG  G  G  G PG PG  G PG  G +G  G  G+PGKDG PG  G  G +G T
Sbjct: 654 ETIGSPGVSGPRGASGAPGLPGERGPPGERGPEGQMGLPGMPGKDGAPGLQGPPGIRGQT 713

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
                 G  G+ G PG   I +  RE C+ +   + +++
Sbjct: 714 ------GMPGVQGPPGRSIIESEIREICTSVLREQMTEM 746



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 102/222 (45%), Gaps = 62/222 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL+G  G++G++G +G     G RG  G PG  G  GP G+PG +G+ G +GDMG+PG 
Sbjct: 296 PGLRGSPGEQGKVGPQG---FTGARGFPGNPGPKGSIGPIGLPGAKGENGERGDMGFPGL 352

Query: 172 QG--------------------------IP---------------GDEGKRGPKGDMGYP 190
           +G                          IP               G +G++G +GD    
Sbjct: 353 KGDQGLPGPQGYPGPPGPPGKISDYRDAIPKFVGPPGSPGYPGQKGAKGEQGERGD---- 408

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                +G+ G  GEPG  G PG+   DG PG +G  G  G PG  G  G  G+ GP+G +
Sbjct: 409 -----EGKQGEKGEPGERGSPGQ---DGSPGSEGRSGLPGFPGPKGEIGFPGVPGPQGLQ 460

Query: 251 GKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGS 292
           G  G  G  G+P I   K E+       E  +  +P ++VGS
Sbjct: 461 GLRGEAGAQGSPGIQGQKGEA------GEPGRDGLPGSMVGS 496



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 100/259 (38%), Gaps = 95/259 (36%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------- 146
           V  QGF  +      PG +G IG  G  GAKGE    GERG+ G PG+ G          
Sbjct: 308 VGPQGFTGARGFPGNPGPKGSIGPIGLPGAKGE---NGERGDMGFPGLKGDQGLPGPQGY 364

Query: 147 ----------------------------------PPGPQGIPGDEGKRGPK---GDMGYP 169
                                               G QG  GDEGK+G K   G+ G P
Sbjct: 365 PGPPGPPGKISDYRDAIPKFVGPPGSPGYPGQKGAKGEQGERGDEGKQGEKGEPGERGSP 424

Query: 170 GPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIP 220
           G  G PG EG+       GPKG++G+PG  G  G  GL GE G  G P   G+ G  G P
Sbjct: 425 GQDGSPGSEGRSGLPGFPGPKGEIGFPGVPGPQGLQGLRGEAGAQGSPGIQGQKGEAGEP 484

Query: 221 GKDGLPGK---------------------DGIPGT---------------NGTNGEKGMT 244
           G+DGLPG                      DG+PG                 G +G  G  
Sbjct: 485 GRDGLPGSMVGSILPGPPGPEGPPGSPGEDGLPGVKGEPGPVGPPGLPGLQGKDGAPGSL 544

Query: 245 GPRGNRGKSGINGVPGTPA 263
           GP G +G  G+ G PG P 
Sbjct: 545 GPPGLQGSPGLPGEPGAPG 563



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 92/245 (37%), Gaps = 79/245 (32%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGP---- 150
            + GF     E   PG+ GP G    +GE GA+G  G++G++GE G PG  G PG     
Sbjct: 437 GLPGFPGPKGEIGFPGVPGPQGLQGLRGEAGAQGSPGIQGQKGEAGEPGRDGLPGSMVGS 496

Query: 151 --------------------------------------QGIPGDEGKRGPKGDMGYPGPQ 172
                                                 QG  G  G  GP G  G PG  
Sbjct: 497 ILPGPPGPEGPPGSPGEDGLPGVKGEPGPVGPPGLPGLQGKDGAPGSLGPPGLQGSPGLP 556

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLPGKD 229
           G PG  G RG +G +G PG  GLDGR    G+ G  G  G  G  G+PG     GLPG  
Sbjct: 557 GEPGAPGPRGIEGAIGKPGLPGLDGRSAEKGDRGQQGEQGPVGPRGLPGSVGAPGLPGVA 616

Query: 230 GIPGTNG-------------------------------TNGEKGMTGPRGNRGKSGINGV 258
           GIPG  G                               T G  G++GPRG  G  G+ G 
Sbjct: 617 GIPGLEGRPGPPGAPGPPGPAGPPGTISDMLSTNNVLETIGSPGVSGPRGASGAPGLPGE 676

Query: 259 PGTPA 263
            G P 
Sbjct: 677 RGPPG 681



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 65/164 (39%), Gaps = 49/164 (29%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GV G RG  GAPG+   PG +G PG+ G  G  G  G PG  G PG +G  G +G  
Sbjct: 657 GSPGVSGPRGASGAPGL---PGERGPPGERGPEGQMGLPGMPGKDGAPGLQGPPGIRGQT 713

Query: 188 GYPGRIGLDGRDGL---------------------------------------------- 201
           G PG  G  GR  +                                              
Sbjct: 714 GMPGVQGPPGRSIIESEIREICTSVLREQMTEMAAQMQGPPGPPGRGRPGRPGSPGPQGR 773

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           PG+PGL G+PG  G  G+PG  G  G  G PG  G  G+KG  G
Sbjct: 774 PGDPGLPGLPGERGFVGLPGPQGAIGLQGSPGERGEKGDKGQEG 817



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 86/242 (35%), Gaps = 95/242 (39%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------ 159
           PGL G   +KG+ G +GE G  G RG  G+ G  G PG  GIPG EG+            
Sbjct: 577 PGLDGRSAEKGDRGQQGEQGPVGPRGLPGSVGAPGLPGVAGIPGLEGRPGPPGAPGPPGP 636

Query: 160 -------------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
                                     GP+G  G PG  G  G  G+RGP+G MG PG  G
Sbjct: 637 AGPPGTISDMLSTNNVLETIGSPGVSGPRGASGAPGLPGERGPPGERGPEGQMGLPGMPG 696

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGK-------------------------------- 222
            DG  GL G PG+ G  G  G+ G PG+                                
Sbjct: 697 KDGAPGLQGPPGIRGQTGMPGVQGPPGRSIIESEIREICTSVLREQMTEMAAQMQGPPGP 756

Query: 223 --------------------DGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                                GLPG        G+PG  G  G +G  G RG +G  G  
Sbjct: 757 PGRGRPGRPGSPGPQGRPGDPGLPGLPGERGFVGLPGPQGAIGLQGSPGERGEKGDKGQE 816

Query: 257 GV 258
           GV
Sbjct: 817 GV 818


>gi|340722546|ref|XP_003399665.1| PREDICTED: collagen alpha-1(IV) chain-like [Bombus terrestris]
          Length = 1941

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 99/177 (55%), Gaps = 31/177 (17%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            + +K Y  PG +G  G +G  G +G  G+KGERGEKGA G  G  G +G PG  G  GPK
Sbjct: 1130 DGSKGY--PGRRGLPGLQGRPGIEGAPGLKGERGEKGAAGFPGLRGMEGKPGRPGLTGPK 1187

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGLDGI------P 211
            GD+G+PG  G+PG  G +GPKGD G PG  G  G  GL       GEPG+ GI      P
Sbjct: 1188 GDIGHPGLPGLPGTLGFQGPKGDQGLPGLPGRKGEPGLVSEKGQKGEPGMPGIRGPVGPP 1247

Query: 212  GRNGMD-----------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            GR+G+D                 G+ G+ GLPG+DG+PG  G  G+ G+ G  G++G
Sbjct: 1248 GRDGIDGDKGERGLSCNCVDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVRGFHGSQG 1304



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 107/246 (43%), Gaps = 77/246 (31%)

Query: 87  WLNAYSRIPLVAMQGFCNSTKEYC-------------PPGLQGPIGQKGEIGAKGEMGVK 133
           + ++Y+ +P+   +   N T   C             PPGL GP G KG+ G  G  G+ 
Sbjct: 210 YPSSYTVVPVPGYKPQRNCTGSACCVPKCFAEKGSRGPPGLMGPQGPKGQKGFPGTEGLL 269

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY------------------------- 168
           G +GEKG PG      PQG+      RGPKGD G                          
Sbjct: 270 GPKGEKGDPG------PQGL------RGPKGDRGKMGIPGFSGISGVPGVQGPPGAPGLP 317

Query: 169 -----------PGPQGIPGDEGKR---GPKGDMGYPGRIGLDGR--DGLPGEPGLDGIPG 212
                      PGP G PGD G R   GP+G  G  G+ G  GR   G  GEPG+DG+ G
Sbjct: 318 GRDGCNGTDGEPGPAGRPGDTGPRGYPGPRGPKGDKGQSGFAGRFPVGQKGEPGIDGVRG 377

Query: 213 RNGMDGIPGKDGLPGKD------GIPGTNGTNGEKG-----MTGPRGNRGKSGINGVPGT 261
             G  G+ G+ G PG        G PG  G  GEKG       GP+G++G+ G  G PG+
Sbjct: 378 PPGQPGLQGERGFPGPKGDRGPYGPPGLQGPRGEKGNMGLAFEGPKGDKGQKGEQGPPGS 437

Query: 262 PAICAY 267
           PA+  +
Sbjct: 438 PAVGGF 443



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/169 (44%), Positives = 93/169 (55%), Gaps = 17/169 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G KG+ G  G  G KG  G +G PG+ G PG +G PG +G+RG KG  G+PG 
Sbjct: 1112 PGLPGFPGIKGDRGEPGIDGSKGYPGRRGLPGLQGRPGIEGAPGLKGERGEKGAAGFPGL 1171

Query: 172  QGI---PGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGI---PGK 222
            +G+   PG  G  GPKGD+G+PG  GL G     G  G+ GL G+PGR G  G+    G+
Sbjct: 1172 RGMEGKPGRPGLTGPKGDIGHPGLPGLPGTLGFQGPKGDQGLPGLPGRKGEPGLVSEKGQ 1231

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS--------GINGVPGTPA 263
             G PG  GI G  G  G  G+ G +G RG S        G+ G PG P 
Sbjct: 1232 KGEPGMPGIRGPVGPPGRDGIDGDKGERGLSCNCVDGLPGLKGEPGLPG 1280



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/147 (43%), Positives = 78/147 (53%), Gaps = 35/147 (23%)

Query: 109 YCPPGLQGPIGQKGEIG-----AKGEMGVKGERGEKGAPGVVG--PPGPQGIPGDEGKRG 161
           Y PPGLQGP G+KG +G      KG+ G KGE+G  G+P V G   PG + I G +G RG
Sbjct: 400 YGPPGLQGPRGEKGNMGLAFEGPKGDKGQKGEQGPPGSPAVGGFLHPGEE-IAGPQGDRG 458

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------------- 205
            KGD G    +G  G +G++GP GD G PG  G+ G  GLPG P                
Sbjct: 459 EKGDTGE---RGSDGQKGEQGPIGDHGIPGTAGMKGEKGLPGAPGIRGRDGFSGPPGPPG 515

Query: 206 --------GLDGIPGRNGMDGIPGKDG 224
                   GLDG+PGR G  G PG+DG
Sbjct: 516 RKGDRGYDGLDGLPGRPGQKGEPGRDG 542



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 42/183 (22%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------PKGDMGYPGPQ 172
            ++GA G  G+ G +G++G PG+VG PG +G+PG++G RG           KG+ G PG +
Sbjct: 1344 DVGAPGHPGLNGGKGDRGLPGLVGEPGIRGMPGEKGDRGQPGPTVAIKGEKGEPGMPGLR 1403

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDG-----------------------------LPG 203
            GI G++G RG +G  GY G  G  G  G                             + G
Sbjct: 1404 GIAGEKGDRGEEGLAGYDGEKGDRGTSGPVGNPGPPGLPGPKGEEGPRGPTGIAGLTIKG 1463

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPG 260
            E GL G+PG++G +G+PG+ G  G+ G+PG  G  G++   G  GP+G +G  G+ G PG
Sbjct: 1464 EKGLPGLPGKHGREGVPGRPGEKGERGLPGLPGHKGDQGPYGPIGPQGEKGDMGLMGAPG 1523

Query: 261  TPA 263
             P 
Sbjct: 1524 LPG 1526



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 84/159 (52%), Gaps = 35/159 (22%)

Query: 135 ERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           E+G +G PG++GP GP+G    PG EG  GPKG+ G PGPQG+      RGPKGD    G
Sbjct: 241 EKGSRGPPGLMGPQGPKGQKGFPGTEGLLGPKGEKGDPGPQGL------RGPKGDR---G 291

Query: 192 RIGLDGRDGLPGEPGL------------DGIPGRNGMDGIPGKDGLPGKD---GIPGTNG 236
           ++G+ G  G+ G PG+            DG    NG DG PG  G PG     G PG  G
Sbjct: 292 KMGIPGFSGISGVPGVQGPPGAPGLPGRDGC---NGTDGEPGPAGRPGDTGPRGYPGPRG 348

Query: 237 TNGEKGMTG-----PRGNRGKSGINGVPGTPAICAYKRE 270
             G+KG +G     P G +G+ GI+GV G P     + E
Sbjct: 349 PKGDKGQSGFAGRFPVGQKGEPGIDGVRGPPGQPGLQGE 387



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 84/172 (48%), Gaps = 40/172 (23%)

Query: 123  EIGAKGEMGVKGE--RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            E G +G  G+ G   +GEKG PG+ G  G +G+PG  G+   KG+ G PG  G  GD+G 
Sbjct: 1447 EEGPRGPTGIAGLTIKGEKGLPGLPGKHGREGVPGRPGE---KGERGLPGLPGHKGDQGP 1503

Query: 181  RGP------KGDMGYPGRIGLDGRDGLPG--------------------EPGLDGIPGRN 214
             GP      KGDMG  G  GL G+DG PG                    EPGL G  G  
Sbjct: 1504 YGPIGPQGEKGDMGLMGAPGLPGQDGAPGHRGLPGQVGPKGEKGVNCIPEPGLPGQKGEQ 1563

Query: 215  GMDGIPGKDGLPGK---------DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G+PG DGLPG+         +G PG +G  GEKG  GP G  G  G  G
Sbjct: 1564 GYPGVPGIDGLPGEKGDRGWPGLEGAPGLDGAKGEKGFPGPMGKMGAIGFVG 1615



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 83/169 (49%), Gaps = 28/169 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G KG+ G  G   V G++GE G  GV GPPG  G+ G+ G  GPKGD    GP
Sbjct: 344 PGPRGPKGDKGQSGFAGRFPV-GQKGEPGIDGVRGPPGQPGLQGERGFPGPKGDR---GP 399

Query: 172 QGIPGDEGKRGPKGDMGYP-----GRIGLDGRDGLPGEPGLDGI---------------- 210
            G PG +G RG KG+MG       G  G  G  G PG P + G                 
Sbjct: 400 YGPPGLQGPRGEKGNMGLAFEGPKGDKGQKGEQGPPGSPAVGGFLHPGEEIAGPQGDRGE 459

Query: 211 ---PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
               G  G DG  G+ G  G  GIPGT G  GEKG+ G  G RG+ G +
Sbjct: 460 KGDTGERGSDGQKGEQGPIGDHGIPGTAGMKGEKGLPGAPGIRGRDGFS 508



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 78/144 (54%), Gaps = 12/144 (8%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            G KGE G+ GE G+ G PG  G      I GD G+ G  G  GYPG +G+PG +G+ G +
Sbjct: 1098 GNKGEPGLPGEAGKPGLPGFPG------IKGDRGEPGIDGSKGYPGRRGLPGLQGRPGIE 1151

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  G  G  G  G PG  G++G PGR G+ G  G  G PG  G+PGT       G  
Sbjct: 1152 GAPGLKGERGEKGAAGFPGLRGMEGKPGRPGLTGPKGDIGHPGLPGLPGT------LGFQ 1205

Query: 245  GPRGNRGKSGINGVPGTPAICAYK 268
            GP+G++G  G+ G  G P + + K
Sbjct: 1206 GPKGDQGLPGLPGRKGEPGLVSEK 1229



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 78/148 (52%), Gaps = 37/148 (25%)

Query: 151 QGIPGDEGKRGPKGDMGYPGP---------------QGIPGDEGKR--GPKGDMGYPGRI 193
           +G+PG++G +G  G  G+PGP               +G+PG++G    GPKG  G PGR 
Sbjct: 611 EGLPGEKGTKGEPGITGFPGPTGPRGFDGPPGLAGSRGLPGEKGASIMGPKGMDGAPGRD 670

Query: 194 GLDGRD---------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G+          G+PG+  +DGIPG  G  G+PG+ G PGK+GIPG  G+ GEKG  
Sbjct: 671 GEKGQKGERGYAGPRGVPGD--VDGIPGAPGEPGLPGEPGTPGKNGIPGFPGSPGEKGEI 728

Query: 245 GPR---------GNRGKSGINGVPGTPA 263
           G R         G +G  G +G PG P 
Sbjct: 729 GGRCIDCLPGLPGIKGDRGFDGQPGLPG 756



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 89/174 (51%), Gaps = 30/174 (17%)

Query: 117 PIGQKGEIG------AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR--------GP 162
           P+GQKGE G        G+ G++GERG  G  G  GP GP G+ G  G++        GP
Sbjct: 363 PVGQKGEPGIDGVRGPPGQPGLQGERGFPGPKGDRGPYGPPGLQGPRGEKGNMGLAFEGP 422

Query: 163 KGDMGYPGPQGIPGD----------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DG 209
           KGD G  G QG PG           E   GP+GD G  G  G  G DG  GE G     G
Sbjct: 423 KGDKGQKGEQGPPGSPAVGGFLHPGEEIAGPQGDRGEKGDTGERGSDGQKGEQGPIGDHG 482

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           IPG  GM    G+ GLPG  GI G +G +G  G  G +G+RG  G++G+PG P 
Sbjct: 483 IPGTAGMK---GEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLPGRPG 533



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 77/147 (52%), Gaps = 26/147 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G +G  G  G  G +G  GEKGA  ++GP G  G PG +G++G KG+ GY GP+
Sbjct: 627 GFPGPTGPRGFDGPPGLAGSRGLPGEKGAS-IMGPKGMDGAPGRDGEKGQKGERGYAGPR 685

Query: 173 GIPGD-EGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------LDGIPGRNGM 216
           G+PGD +G  G  G+ G PG  G  G++G+PG PG               L G+PG  G 
Sbjct: 686 GVPGDVDGIPGAPGEPGLPGEPGTPGKNGIPGFPGSPGEKGEIGGRCIDCLPGLPGIKGD 745

Query: 217 DGIPGKDGLPGKDGI---------PGT 234
            G  G+ GLPG  G          PG+
Sbjct: 746 RGFDGQPGLPGPRGPAGERGFPGEPGS 772



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 65/212 (30%)

Query: 112  PGLQGPIGQKGEIG---AKGEMGVK-----------GERGEKGAPGVVGPPGPQGIPGDE 157
            PG +GP G  G  G   AKGE+G+            GE+GEKG PG  G  GP G+PG  
Sbjct: 993  PGREGPRGFPGAAGLKGAKGEVGISVKGSPGLPGPPGEKGEKGLPGPPGKEGPDGLPGLP 1052

Query: 158  GKRGPKGDM------------------------------------------GYPGPQGIP 175
            G  G KGD                                           G PG  G P
Sbjct: 1053 GFSGEKGDAGIPGIGGLPGAPGEKGDTGPMGPPGPPGVAGIPGIDGNKGEPGLPGEAGKP 1112

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  G  G KGD G PG   +DG  G PG    PGL G PG  G  G+ G+ G  G  G P
Sbjct: 1113 GLPGFPGIKGDRGEPG---IDGSKGYPGRRGLPGLQGRPGIEGAPGLKGERGEKGAAGFP 1169

Query: 233  GTNGTNGE---KGMTGPRGNRGKSGINGVPGT 261
            G  G  G+    G+TGP+G+ G  G+ G+PGT
Sbjct: 1170 GLRGMEGKPGRPGLTGPKGDIGHPGLPGLPGT 1201



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 99/266 (37%), Gaps = 109/266 (40%)

Query: 108  EYCPPGLQGPIGQKGE---IGAKGE-----------MGVKGERGEKGAPGVVGPPGPQGI 153
            E+  PG +G  G KGE   +G KGE            G+KG+RG  G  G  GPPG  G+
Sbjct: 885  EHGEPGRRGETGAKGEPGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDGL 944

Query: 154  PGDEGKR------------------------GPKGDMGYPGPQGIPGDEGKRGP------ 183
             GD+G +                        GP+GD G  GP G PG+ G+ GP      
Sbjct: 945  SGDKGLQGISGPPGPPGSIGAPGPVGPRGLPGPRGDKGNIGPMGFPGEPGREGPRGFPGA 1004

Query: 184  --------------------------KGDMGYPGRIGLDGRDGLPGEPGLDG-------- 209
                                      KG+ G PG  G +G DGLPG PG  G        
Sbjct: 1005 AGLKGAKGEVGISVKGSPGLPGPPGEKGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIP 1064

Query: 210  -------------------------------IPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                           I G  G  G+PG+ G PG  G PG  G  
Sbjct: 1065 GIGGLPGAPGEKGDTGPMGPPGPPGVAGIPGIDGNKGEPGLPGEAGKPGLPGFPGIKGDR 1124

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAI 264
            GE G+ G +G  G+ G+ G+ G P I
Sbjct: 1125 GEPGIDGSKGYPGRRGLPGLQGRPGI 1150



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 81/200 (40%), Gaps = 50/200 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG--------------D 156
            P GL GP G KG IG  G  G  G  G +G PG  G  G +G  G              +
Sbjct: 971  PRGLPGPRGDKGNIGPMGFPGEPGREGPRGFPGAAGLKGAKGEVGISVKGSPGLPGPPGE 1030

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM----------------------------- 187
            +G++G  G  G  GP G+PG  G  G KGD                              
Sbjct: 1031 KGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIPGIGGLPGAPGEKGDTGPMGPPGPPGV 1090

Query: 188  -------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                   G  G  GL G  G PG PG  GI G  G  GI G  G PG+ G+PG  G  G 
Sbjct: 1091 AGIPGIDGNKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSKGYPGRRGLPGLQGRPGI 1150

Query: 241  KGMTGPRGNRGKSGINGVPG 260
            +G  G +G RG+ G  G PG
Sbjct: 1151 EGAPGLKGERGEKGAAGFPG 1170



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 96/228 (42%), Gaps = 84/228 (36%)

Query: 113  GLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRG-- 161
            G QGP G +G  G    KGE G+  E+G+KG PG+      VGPPG  GI GD+G+RG  
Sbjct: 1203 GFQGPKGDQGLPGLPGRKGEPGLVSEKGQKGEPGMPGIRGPVGPPGRDGIDGDKGERGLS 1262

Query: 162  -------P--KGDMGYPGPQGIPG------DEGKRGPKG--------------------- 185
                   P  KG+ G PG  G+PG      D G RG  G                     
Sbjct: 1263 CNCVDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVRGFHGSQGDIGPMGPPGEPGTPGIDG 1322

Query: 186  ---------------------DMGYPGRIGLDGRDG------LPGEPGLDGIPGRNGMDG 218
                                 D+G PG  GL+G  G      L GEPG+ G+PG  G  G
Sbjct: 1323 LPGEPGDIGPPGPPGFPGLDGDVGAPGHPGLNGGKGDRGLPGLVGEPGIRGMPGEKGDRG 1382

Query: 219  IP----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             P          G+ G+PG  GI G  G  GE+G+ G  G +G  G +
Sbjct: 1383 QPGPTVAIKGEKGEPGMPGLRGIAGEKGDRGEEGLAGYDGEKGDRGTS 1430



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 80/187 (42%), Gaps = 55/187 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE-----------KGAPGVVGPPGPQGIPGDEGKRG 161
            G  G  G++GE GAKGE G  G++GE           KG  G  G PG +G PG  G+ G
Sbjct: 884  GEHGEPGRRGETGAKGEPGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDG 943

Query: 162  PKGDMGYP------------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
              GD G                    GP+G+PG  G +G  G MG+PG  G +G  G PG
Sbjct: 944  LSGDKGLQGISGPPGPPGSIGAPGPVGPRGLPGPRGDKGNIGPMGFPGEPGREGPRGFPG 1003

Query: 204  EPGLDGIPGRNGMD-----------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
              GL G  G  G+                  G+PG  G  G DG+PG  G +GEKG    
Sbjct: 1004 AAGLKGAKGEVGISVKGSPGLPGPPGEKGEKGLPGPPGKEGPDGLPGLPGFSGEKG---- 1059

Query: 247  RGNRGKS 253
                  +
Sbjct: 1060 -----DA 1061



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 88/216 (40%), Gaps = 83/216 (38%)

Query: 112 PGLQGPIGQKGEIGAK------GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG  G  G+KGEIG +      G  G+KG+RG  G PG+ GP            RGP G+
Sbjct: 716 PGFPGSPGEKGEIGGRCIDCLPGLPGIKGDRGFDGQPGLPGP------------RGPAGE 763

Query: 166 MGYP---------------------------GPQGIP---------------GDEGKRGP 183
            G+P                           GPQG P               GD+G RGP
Sbjct: 764 RGFPGEPGSDGLPGPIGPPGPPGKDGIPGAAGPQGEPGTPAVVTENMLKVEKGDKGVRGP 823

Query: 184 KGD------------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G                    G+PG  G+ G  G PG+   DGIPGR    G  G+ G+
Sbjct: 824 VGRDGPPGLPGPPGEKGPMGFEGFPGPKGIAGDRGFPGQ---DGIPGRPCAPGRKGEPGV 880

Query: 226 P--GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
              G+ G PG  G  G KG  GP G++G+ G+  +P
Sbjct: 881 SVKGEHGEPGRRGETGAKGEPGPLGDKGEPGLCPIP 916



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 54/108 (50%), Gaps = 16/108 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE-------RGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           PG  G  GQKGE G  G  GV G+        GE G PG  G PG  GIPG  G  G KG
Sbjct: 667 PGRDGEKGQKGERGYAGPRGVPGDVDGIPGAPGEPGLPGEPGTPGKNGIPGFPGSPGEKG 726

Query: 165 DMG------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           ++G       P   G+PG +G RG  G  G PG  G  G  G PGEPG
Sbjct: 727 EIGGRCIDCLP---GLPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPG 771



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 58/102 (56%), Gaps = 5/102 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG-----EKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            PGL G  G  G  G  G++G KGE+G     E G PG  G  G  G+PG +G  G KGD 
Sbjct: 1522 PGLPGQDGAPGHRGLPGQVGPKGEKGVNCIPEPGLPGQKGEQGYPGVPGIDGLPGEKGDR 1581

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G+PG +G PG +G +G KG  G  G++G  G  G  G+ GLD
Sbjct: 1582 GWPGLEGAPGLDGAKGEKGFPGPMGKMGAIGFVGQKGDRGLD 1623



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 86/209 (41%), Gaps = 62/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGER---GEKGAPGVV-----GPPGPQGIPGDEGKRGPKG 164
            G  GP G  G+ G  G+ G+ G     G KG PGV      G PG +G  G +G+ GP G
Sbjct: 846  GFPGPKGIAGDRGFPGQDGIPGRPCAPGRKGEPGVSVKGEHGEPGRRGETGAKGEPGPLG 905

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLD------------- 208
            D G PG   IP DE  +G KGD G PG     G  GRDGL G+ GL              
Sbjct: 906  DKGEPGLCPIP-DELIKGIKGDRGAPGEKGEPGPPGRDGLSGDKGLQGISGPPGPPGSIG 964

Query: 209  --------------------------GIPGRNGMDGIPGKDGLPGKDGIPGTN------- 235
                                      G PGR G  G PG  GL G  G  G +       
Sbjct: 965  APGPVGPRGLPGPRGDKGNIGPMGFPGEPGREGPRGFPGAAGLKGAKGEVGISVKGSPGL 1024

Query: 236  ----GTNGEKGMTGPRGNRGKSGINGVPG 260
                G  GEKG+ GP G  G  G+ G+PG
Sbjct: 1025 PGPPGEKGEKGLPGPPGKEGPDGLPGLPG 1053



 Score = 39.7 bits (91), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 85/218 (38%), Gaps = 76/218 (34%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------------------PP 148
           C PGL G  G +G  G  G  G +G  GE+G PG  G                       
Sbjct: 735 CLPGLPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPGSDGLPGPIGPPGPPGKDGIPGAA 794

Query: 149 GPQGIP---------------GDEGKRGPKGD------------------MGYPGPQGIP 175
           GPQG P               GD+G RGP G                    G+PGP+GI 
Sbjct: 795 GPQGEPGTPAVVTENMLKVEKGDKGVRGPVGRDGPPGLPGPPGEKGPMGFEGFPGPKGI- 853

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--GMDGIPGKDGLPGKDGIPG 233
                    GD G+PG+ G+ GR   P  PG  G PG +  G  G PG+ G  G  G PG
Sbjct: 854 --------AGDRGFPGQDGIPGR---PCAPGRKGEPGVSVKGEHGEPGRRGETGAKGEPG 902

Query: 234 TNGTNGEKGM--------TGPRGNRGKSGINGVPGTPA 263
             G  GE G+         G +G+RG  G  G PG P 
Sbjct: 903 PLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPG 940


>gi|194761530|ref|XP_001962982.1| GF15711 [Drosophila ananassae]
 gi|190616679|gb|EDV32203.1| GF15711 [Drosophila ananassae]
          Length = 1780

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 90/153 (58%), Gaps = 9/153 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
            PG  G  G  G  G KGE+G +G +G++G PG +G  G +G       PG  G  GPKGD
Sbjct: 1357 PGQPGRDGFNGAAGLKGEIGYQGIKGDRGEPGPIGQKGAKGDQGHPGAPGLAGATGPKGD 1416

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GYPG   + G +G  GP G+ G+PG  GL+GRDGLPG+PG  G PG     G  G+ G 
Sbjct: 1417 TGYPG---LDGSDGPPGPAGERGFPGPKGLNGRDGLPGQPGQKGEPGVRPPPGAKGEPGQ 1473

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            PG+DG  G  G  G++G+ G +G RG+ G  G+
Sbjct: 1474 PGRDGQKGEPGLEGQRGLIGIQGERGEKGERGL 1506



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 104/211 (49%), Gaps = 43/211 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGPQGIPGDEGKR--- 160
           G+QGP G  G  GAKGE G          KGE+GE G  G  G  GPQG PG++G+R   
Sbjct: 181 GMQGPRGYPGIAGAKGEKGEPAKENGNYAKGEKGEPGFSGRSGYAGPQGAPGEKGQRGET 240

Query: 161 ------GPKGDMGYPGPQG-------IPGDEGKRGPKG-------------DMGYPGRIG 194
                 GP+GD G  G +G        PGD+G +G KG             ++G  G  G
Sbjct: 241 GPYGAKGPRGDYGLKGEKGDSCFGPLKPGDKGDKGEKGEPAVKLPSTGVSIELGPRGEEG 300

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  GLPG  G  G  G  G+DG  G+ GLPG  G  G  G  G+ G +G +G+RG++G
Sbjct: 301 QKGEPGLPGRKGEAGQVGDTGLDGQKGEKGLPGGPGDRGRQGNFGQPGPSGQKGDRGETG 360

Query: 255 INGVPGTPAICAYKRESCSLLPNSETSQLLI 285
           +NG+PG P      ++     P S   Q L+
Sbjct: 361 LNGLPGNPG-----QKGEPGRPGSTGQQGLV 386



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 103/230 (44%), Gaps = 59/230 (25%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV----------------------- 132
            L  + G    T    P G  G IG KGE G +G+ G+                       
Sbjct: 1180 LAGLNGVKGETGPVGPQGYPGAIGIKGERGPRGQPGLPAIIDIPKLRGDKGDQGERGLTG 1239

Query: 133  -KGERGEKGAPGVV---------GPPGPQGI------PGDEGKRGPKGDMGYP-----GP 171
             KGERGE+GA G +         G  GP+G+      PG +G  GP+G+ GYP     G 
Sbjct: 1240 QKGERGEQGAQGAIGYTGAKGDQGLQGPRGLNGLNGAPGLKGDIGPQGEQGYPGQTIKGE 1299

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------NGMDGIPGKDGL 225
            +G+PG  GK G +G  G PG  G  G  GLPGEPGL G+PGR       G  GI G  G 
Sbjct: 1300 KGLPGRSGKHGREGLTGPPGIKGDTGLPGLPGEPGLVGLPGRVGPAGAKGERGITGSPGQ 1359

Query: 226  PGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPGTPAICA 266
            PG+DG  G  G  GE         +G  GP G +G  G  G PG P +  
Sbjct: 1360 PGRDGFNGAAGLKGEIGYQGIKGDRGEPGPIGQKGAKGDQGHPGAPGLAG 1409



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 90/175 (51%), Gaps = 21/175 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGDM 166
            G QG  G +GE G  G+ G KG++G  GAPG+ G  GP+G      + G +G  GP G+ 
Sbjct: 1376 GYQGIKGDRGEPGPIGQKGAKGDQGHPGAPGLAGATGPKGDTGYPGLDGSDGPPGPAGER 1435

Query: 167  GYPGPQGI------PGDEGKRG---------PKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G+PGP+G+      PG  G++G          KG+ G PGR G  G  GL G+ GL GI 
Sbjct: 1436 GFPGPKGLNGRDGLPGQPGQKGEPGVRPPPGAKGEPGQPGRDGQKGEPGLEGQRGLIGIQ 1495

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G  G  G  G  G  G  G PG  G  GE+G+ G  G  G  G+ G PG P   A
Sbjct: 1496 GERGEKGERGLIGQSGLVGRPGPKGDRGEQGLVGLEGAVGLQGLKGEPGAPCTAA 1550



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 86/166 (51%), Gaps = 24/166 (14%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++G  G KGE G  G +G+ G +GE+GAPG  GP G  GI G  GKRG       PG  
Sbjct: 931  GVRGRDGAKGEPGNPGLVGMPGNKGERGAPGNDGPKGFNGIAGMPGKRG------SPGIP 984

Query: 173  GIPGDEGKRGPKGDMGYPGRI---------------GLDGRDGLPGEPGLDGIPGRNGMD 217
            G+PG +G++G  G  G  G +               G  G  G PGEPGLDG+ G  G  
Sbjct: 985  GVPGAKGEKGTPGLTGISGAVGGRGAPGPPGLMGVKGDQGPIGAPGEPGLDGLNGEKGNQ 1044

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+PG DG P   G+PG     G+KG  G  G RG  G+ G PG P 
Sbjct: 1045 GLPGMDGAP---GLPGDASEKGQKGEPGISGLRGIQGLTGEPGLPG 1087



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/113 (46%), Positives = 64/113 (56%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           +G+PG  G  GPKG  G+PG +G  GD+G++G  G  G  G  G  G  G+ G PG+ GI
Sbjct: 90  RGLPGPSGPSGPKGAQGFPGSEGPAGDKGQKGDPGPYGQRGAKGERGLQGMHGLPGIAGI 149

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG  G  G PG +G  G DG PG  G  G  GM GPRG  G +G  G  G PA
Sbjct: 150 PGSAGNPGAPGLNGKDGCDGSPGLPGLQGLSGMQGPRGYPGIAGAKGEKGEPA 202



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 93/185 (50%), Gaps = 29/185 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G+ G +G  G +G  G +GE+G   + G PG  G  G  G  G KG++GY   Q
Sbjct: 1325 GLPGLPGEPGLVGLPGRVGPAGAKGERG---ITGSPGQPGRDGFNGAAGLKGEIGY---Q 1378

Query: 173  GIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGE---PGLDGI---PGRNGMDGIP 220
            GI GD G+ GP      KGD G+PG  GL G  G  G+   PGLDG    PG  G  G P
Sbjct: 1379 GIKGDRGEPGPIGQKGAKGDQGHPGAPGLAGATGPKGDTGYPGLDGSDGPPGPAGERGFP 1438

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSET 280
            G  GL G+DG+PG  G  GE G+  P G +G+      PG P     K E     P  E 
Sbjct: 1439 GPKGLNGRDGLPGQPGQKGEPGVRPPPGAKGE------PGQPGRDGQKGE-----PGLEG 1487

Query: 281  SQLLI 285
             + LI
Sbjct: 1488 QRGLI 1492



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 94/181 (51%), Gaps = 26/181 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGY 168
            PG+QG  G  G  GA+G  G  G  G  G  G  GP GPQG PG    +G+RGP+G  G 
Sbjct: 1157 PGVQGAPGAPGYPGAQGYKGDAGLAGLNGVKGETGPVGPQGYPGAIGIKGERGPRGQPGL 1216

Query: 169  P---------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI--- 210
            P               G +G+ G +G+RG +G  G  G  G  G  GL G  GL+G+   
Sbjct: 1217 PAIIDIPKLRGDKGDQGERGLTGQKGERGEQGAQGAIGYTGAKGDQGLQGPRGLNGLNGA 1276

Query: 211  PGRNGMDGIPGKDGLPGK-----DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            PG  G  G  G+ G PG+      G+PG +G +G +G+TGP G +G +G+ G+PG P + 
Sbjct: 1277 PGLKGDIGPQGEQGYPGQTIKGEKGLPGRSGKHGREGLTGPPGIKGDTGLPGLPGEPGLV 1336

Query: 266  A 266
             
Sbjct: 1337 G 1337



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 81/157 (51%), Gaps = 11/157 (7%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPG--------VVGPPGPQGIPGDEGKRG---PKGDMG 167
            GQKGE G  G  G++G  GE G PG        V G PGPQG  GD G+ G     G  G
Sbjct: 1063 GQKGEPGISGLRGIQGLTGEPGLPGEKGLPGVPVHGRPGPQGEKGDTGRSGFDGVDGANG 1122

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
              G QG PG  G++G KG +G PG  G  G DG PG  G  G PG  G  G  G  GL G
Sbjct: 1123 EKGDQGSPGAWGEKGDKGSVGLPGNPGAPGIDGQPGVQGAPGAPGYPGAQGYKGDAGLAG 1182

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             +G+ G  G  G +G  G  G +G+ G  G PG PAI
Sbjct: 1183 LNGVKGETGPVGPQGYPGAIGIKGERGPRGQPGLPAI 1219



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 92/193 (47%), Gaps = 41/193 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----- 167
            G QGPIG  GE G  G   + GE+G +G PG+ G PG   +PGD  ++G KG+ G     
Sbjct: 1021 GDQGPIGAPGEPGLDG---LNGEKGNQGLPGMDGAPG---LPGDASEKGQKGEPGISGLR 1074

Query: 168  ----------YPGPQGIPGD--EGKRGPKGDMGYPGRIGLDGRDGLPGEPG--------- 206
                       PG +G+PG    G+ GP+G+ G  GR G DG DG  GE G         
Sbjct: 1075 GIQGLTGEPGLPGEKGLPGVPVHGRPGPQGEKGDTGRSGFDGVDGANGEKGDQGSPGAWG 1134

Query: 207  ---------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                     L G PG  G+DG PG  G PG  G PG  G  G+ G+ G  G +G++G  G
Sbjct: 1135 EKGDKGSVGLPGNPGAPGIDGQPGVQGAPGAPGYPGAQGYKGDAGLAGLNGVKGETGPVG 1194

Query: 258  VPGTPAICAYKRE 270
              G P     K E
Sbjct: 1195 PQGYPGAIGIKGE 1207



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 83/160 (51%), Gaps = 18/160 (11%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD- 177
            G  GE G +G  G  GE+G+KG+ G+ G PG  GI G  G +G  G  GYPG QG  GD 
Sbjct: 1119 GANGEKGDQGSPGAWGEKGDKGSVGLPGNPGAPGIDGQPGVQGAPGAPGYPGAQGYKGDA 1178

Query: 178  --------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---------PGRNGMDGIP 220
                    +G+ GP G  GYPG IG+ G  G  G+PGL  I          G  G  G+ 
Sbjct: 1179 GLAGLNGVKGETGPVGPQGYPGAIGIKGERGPRGQPGLPAIIDIPKLRGDKGDQGERGLT 1238

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G  G+ G  G  G  G KG  G +G RG +G+NG PG
Sbjct: 1239 GQKGERGEQGAQGAIGYTGAKGDQGLQGPRGLNGLNGAPG 1278



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 104/225 (46%), Gaps = 36/225 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ-------------------- 151
           PGLQG  GQKG  G  G  G +G  G+KG  G+ G  GPQ                    
Sbjct: 426 PGLQGYPGQKGGTGMPGRPGGEGLPGQKGEKGIGGRDGPQGPVGPVGHPGPPGPEGQKGD 485

Query: 152 -GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G PG  G +GPKG+ GYPG  G+PG +G+RG KG  G PG    D + G PGE G+ G 
Sbjct: 486 SGQPG-YGTQGPKGNDGYPGRPGLPGAKGERGFKGVAGVPG----DSKLGRPGETGIAGA 540

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT------PAI 264
           PG+ G  G PG  G  G+ GI G  G        G +G++G  G++G+PG       P  
Sbjct: 541 PGQKGDAGRPGTPGQKGEMGIKGDVGGKCSLCPQGQKGDKGTRGLDGIPGNVGARGPPGE 600

Query: 265 CAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNV 309
             Y  E  S   N +T     PP + G + +      V   G N 
Sbjct: 601 RGYPGERGSDGINGQTG----PPGLRGEDGVPGVPGPVGEAGQNA 641



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 94/206 (45%), Gaps = 50/206 (24%)

Query: 112 PGLQGPIGQKG-----------EIGAKGEMGVK---GERGEKGAPGVVGPPGPQGIPGDE 157
           PGL G  G++G           ++G  GE G+    G++G+ G PG  G  G  GI GD 
Sbjct: 506 PGLPGAKGERGFKGVAGVPGDSKLGRPGETGIAGAPGQKGDAGRPGTPGQKGEMGIKGDV 565

Query: 158 GKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG-- 209
           G +      G KGD G  G  GIPG+ G RGP G+ GYPG  G DG +G  G PGL G  
Sbjct: 566 GGKCSLCPQGQKGDKGTRGLDGIPGNVGARGPPGERGYPGERGSDGINGQTGPPGLRGED 625

Query: 210 -----------------------IP--GRNGMDGIPGKDGLP---GKDGIPGTNGTNGEK 241
                                  IP  G  G  G PG  G+    G+DGIPG  G  GE 
Sbjct: 626 GVPGVPGPVGEAGQNAIQNLSLVIPHKGEKGNPGYPGAAGVKGERGRDGIPGQPGIKGEF 685

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAY 267
           G+ G +G  G  G +G PG P    Y
Sbjct: 686 GIKGDKGLTGFPGADGAPGAPGRDGY 711



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 87/164 (53%), Gaps = 20/164 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGV-------------KGERGEKGAPGVVGPPGPQG---IPGD 156
           GL+G  G  G +G KGE G              KGERGE G PG  GP G +G   + G+
Sbjct: 730 GLKGDKGTSGYVGQKGEPGTCEIDDLRMPAKGSKGERGETGMPGPEGPKGEKGNFGLRGE 789

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G  GP+G +G  GP+G+ G  G++G  G +G PG  G +G  GLPG    DG  G+ G 
Sbjct: 790 KGATGPQGPVGPVGPRGLTGPRGEKGHSGPIGAPGNAGKNGLRGLPGR---DGARGQKGE 846

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GI    G PG+ G+ G  G  G++G  GP+G  G  G  G PG
Sbjct: 847 QGIT-VAGPPGRQGLDGLQGEKGDRGQPGPQGLPGIEGSIGYPG 889



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 94/210 (44%), Gaps = 68/210 (32%)

Query: 111  PPGLQGPIGQKGE---IGAKGEMGVKG---------ERGEKGAPG--VVGPPGPQGIPGD 156
            P GL GP G+KG    IGA G  G  G          RG+KG  G  V GPPG QG+   
Sbjct: 804  PRGLTGPRGEKGHSGPIGAPGNAGKNGLRGLPGRDGARGQKGEQGITVAGPPGRQGL--- 860

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI----------------------- 193
            +G +G KGD G PGPQG+PG EG       +GYPG                         
Sbjct: 861  DGLQGEKGDRGQPGPQGLPGIEG------SIGYPGDKGDAGAPGAAGRPGALGEKGDVGP 914

Query: 194  ----------------GLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDGLPGKDGI--- 231
                            G+ GRDG    PG PGL G+PG  G  G PG DG  G +GI   
Sbjct: 915  LGPPGVPGPPGVPGIDGVRGRDGAKGEPGNPGLVGMPGNKGERGAPGNDGPKGFNGIAGM 974

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG  G+ G  G+ G +G +G  G+ G+ G 
Sbjct: 975  PGKRGSPGIPGVPGAKGEKGTPGLTGISGA 1004



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 83/175 (47%), Gaps = 45/175 (25%)

Query: 119 GQKGEIGAKGEMGVK------GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GQKGE+G KG++G K      G++G+KG  G+       GIPG+ G RGP G+ GYPG +
Sbjct: 554 GQKGEMGIKGDVGGKCSLCPQGQKGDKGTRGL------DGIPGNVGARGPPGERGYPGER 607

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLD---------------------------GRDGLPGEP 205
           G  G  G+ GP      PG  G D                           G  G PG P
Sbjct: 608 GSDGINGQTGP------PGLRGEDGVPGVPGPVGEAGQNAIQNLSLVIPHKGEKGNPGYP 661

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G+ G  G DGIPG+ G+ G+ GI G  G  G  G  G  G  G+ G NG PG
Sbjct: 662 GAAGVKGERGRDGIPGQPGIKGEFGIKGDKGLTGFPGADGAPGAPGRDGYNGAPG 716



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 92/204 (45%), Gaps = 47/204 (23%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------------G 146
            P G  G  G  G+ G+ G  GV G +GEKG PG+                         G
Sbjct: 965  PKGFNGIAGMPGKRGSPGIPGVPGAKGEKGTPGLTGISGAVGGRGAPGPPGLMGVKGDQG 1024

Query: 147  PPGPQGIPGDEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDG 200
            P G  G PG +G  G KG+ G P   G  G+PGD  ++G KG+ G  G     GL G  G
Sbjct: 1025 PIGAPGEPGLDGLNGEKGNQGLPGMDGAPGLPGDASEKGQKGEPGISGLRGIQGLTGEPG 1084

Query: 201  LPGEPGLDGIP--------------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            LPGE GL G+P              GR+G DG+ G +G  G  G PG  G  G+KG  G 
Sbjct: 1085 LPGEKGLPGVPVHGRPGPQGEKGDTGRSGFDGVDGANGEKGDQGSPGAWGEKGDKGSVGL 1144

Query: 247  RGNRGKSGINGVP---GTPAICAY 267
             GN G  GI+G P   G P    Y
Sbjct: 1145 PGNPGAPGIDGQPGVQGAPGAPGY 1168



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 78/157 (49%), Gaps = 3/157 (1%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGYPGPQGI 174
           I +KG  G  G  G  G +G +G PG  GP G +G  GD G   +RG KG+ G  G  G+
Sbjct: 84  IAEKGNRGLPGPSGPSGPKGAQGFPGSEGPAGDKGQKGDPGPYGQRGAKGERGLQGMHGL 143

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG  G  G  G+ G PG  G DG DG PG PGL G+ G  G  G PG  G  G+ G P  
Sbjct: 144 PGIAGIPGSAGNPGAPGLNGKDGCDGSPGLPGLQGLSGMQGPRGYPGIAGAKGEKGEPAK 203

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
              N  KG  G  G  G+SG  G  G P     + E+
Sbjct: 204 ENGNYAKGEKGEPGFSGRSGYAGPQGAPGEKGQRGET 240



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 88/182 (48%), Gaps = 23/182 (12%)

Query: 112  PGLQGPIGQKGEIG-----AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            PGL+G IG +GE G      KGE G+ G  G+ G  G+ GPPG +G  G  G  G  G +
Sbjct: 1277 PGLKGDIGPQGEQGYPGQTIKGEKGLPGRSGKHGREGLTGPPGIKGDTGLPGLPGEPGLV 1336

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------PGRNGMDGIP 220
            G PG  G  G +G+RG  G  G PGR G +G  GL GE G  GI      PG  G  G  
Sbjct: 1337 GLPGRVGPAGAKGERGITGSPGQPGRDGFNGAAGLKGEIGYQGIKGDRGEPGPIGQKGAK 1396

Query: 221  GKDGLPGKDGI------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G PG  G+            PG +G++G  G  G RG  G  G+NG  G P     K
Sbjct: 1397 GDQGHPGAPGLAGATGPKGDTGYPGLDGSDGPPGPAGERGFPGPKGLNGRDGLPGQPGQK 1456

Query: 269  RE 270
             E
Sbjct: 1457 GE 1458



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 99/230 (43%), Gaps = 68/230 (29%)

Query: 93  RIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
           R+P    +G    T     PG +GP G+KG        G++GE+G  G  G VGP GP+G
Sbjct: 756 RMPAKGSKGERGETGM---PGPEGPKGEKGNF------GLRGEKGATGPQGPVGPVGPRG 806

Query: 153 IPGDEGKRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGY-----PGRIGLDGRDGL 201
           + G  G++G  G +G PG       +G+PG +G RG KG+ G      PGR GLDG  G 
Sbjct: 807 LTGPRGEKGHSGPIGAPGNAGKNGLRGLPGRDGARGQKGEQGITVAGPPGRQGLDGLQGE 866

Query: 202 P---GEPGLDGIPGRNG------------------------------------------- 215
               G+PG  G+PG  G                                           
Sbjct: 867 KGDRGQPGPQGLPGIEGSIGYPGDKGDAGAPGAAGRPGALGEKGDVGPLGPPGVPGPPGV 926

Query: 216 --MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             +DG+ G+DG  G+ G PG  G  G KG  G  GN G  G NG+ G P 
Sbjct: 927 PGIDGVRGRDGAKGEPGNPGLVGMPGNKGERGAPGNDGPKGFNGIAGMPG 976



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 106/267 (39%), Gaps = 61/267 (22%)

Query: 45  GDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCN 104
           GD  D      P V+     +  E+  R +E Q      P     A      V   G   
Sbjct: 269 GDKGDKGEKGEPAVKLPSTGVSIELGPRGEEGQKGEPGLPGRKGEAGQ----VGDTGLDG 324

Query: 105 STKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK----- 159
              E   PG  G  G++G  G  G  G KG+RGE G  G+ G PG +G PG  G      
Sbjct: 325 QKGEKGLPGGPGDRGRQGNFGQPGPSGQKGDRGETGLNGLPGNPGQKGEPGRPGSTGQQG 384

Query: 160 --------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                               +GP+G  G PGPQG+ G +G+    G  GYPG+    G  
Sbjct: 385 LVGPPGPPGGGRGTPGPSGPKGPRGYAGPPGPQGLNGADGQ---PGLQGYPGQ---KGGT 438

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLP--------------------------GKDGIPG 233
           G+PG PG +G+PG+ G  GI G+DG                            G  G  G
Sbjct: 439 GMPGRPGGEGLPGQKGEKGIGGRDGPQGPVGPVGHPGPPGPEGQKGDSGQPGYGTQGPKG 498

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +G  G  G+ G +G RG  G+ GVPG
Sbjct: 499 NDGYPGRPGLPGAKGERGFKGVAGVPG 525



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 85/172 (49%), Gaps = 6/172 (3%)

Query: 89   NAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP 148
              Y    +   +G    + ++   GL GP G KG+ G  G   + GE G  G PG VGP 
Sbjct: 1289 QGYPGQTIKGEKGLPGRSGKHGREGLTGPPGIKGDTGLPG---LPGEPGLVGLPGRVGPA 1345

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G +G  G  G  G  G  G+ G  G+ G+ G +G KGD G PG IG  G  G  G PG  
Sbjct: 1346 GAKGERGITGSPGQPGRDGFNGAAGLKGEIGYQGIKGDRGEPGPIGQKGAKGDQGHPGAP 1405

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G  G  G  G  GL G DG P   G  GE+G  GP+G  G+ G+ G PG
Sbjct: 1406 GLAGATGPKGDTGYPGLDGSDGPP---GPAGERGFPGPKGLNGRDGLPGQPG 1454



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 87/196 (44%), Gaps = 47/196 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG--YPG 170
           G QGP+G  G  G  G  G KG  G  GAPG  G  G +G+PG +G RG KG+ G    G
Sbjct: 794 GPQGPVGPVGPRGLTGPRGEKGHSGPIGAPGNAGKNGLRGLPGRDGARGQKGEQGITVAG 853

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------------ 206
           P G  G +G +G KGD G PG  GL G +G  G PG                        
Sbjct: 854 PPGRQGLDGLQGEKGDRGQPGPQGLPGIEGSIGYPGDKGDAGAPGAAGRPGALGEKGDVG 913

Query: 207 ---------------LDGIPGRNGMDGIPGKDGL------PGKDGIPGTNGTNGEKGMTG 245
                          +DG+ GR+G  G PG  GL       G+ G PG +G  G  G+ G
Sbjct: 914 PLGPPGVPGPPGVPGIDGVRGRDGAKGEPGNPGLVGMPGNKGERGAPGNDGPKGFNGIAG 973

Query: 246 PRGNRGKSGINGVPGT 261
             G RG  GI GVPG 
Sbjct: 974 MPGKRGSPGIPGVPGA 989



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 88/210 (41%), Gaps = 60/210 (28%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGV---------VGPPGPQGIPGDEGKRGPKGDMGYP 169
           G+KGE G  G+ G+ G++GEKG PG           G PGP G  GD G+ G  G  G P
Sbjct: 309 GRKGEAGQVGDTGLDGQKGEKGLPGGPGDRGRQGNFGQPGPSGQKGDRGETGLNGLPGNP 368

Query: 170 GPQGIPGDEGK-------------------------RGPKGDMGYPGRIGLDGRDGLPGE 204
           G +G PG  G                          +GP+G  G PG  GL+G DG PG 
Sbjct: 369 GQKGEPGRPGSTGQQGLVGPPGPPGGGRGTPGPSGPKGPRGYAGPPGPQGLNGADGQPGL 428

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK----------------------- 241
            G  G  G  GM G PG +GLPG+ G  G  G +G +                       
Sbjct: 429 QGYPGQKGGTGMPGRPGGEGLPGQKGEKGIGGRDGPQGPVGPVGHPGPPGPEGQKGDSGQ 488

Query: 242 ---GMTGPRGNRGKSGINGVPGTPAICAYK 268
              G  GP+GN G  G  G+PG      +K
Sbjct: 489 PGYGTQGPKGNDGYPGRPGLPGAKGERGFK 518



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 87/191 (45%), Gaps = 19/191 (9%)

Query: 112 PGLQGPIG---QKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIPGDEGKRGPKGD 165
           PG +GP G   QKG+ G  G+ G KGERG +G    PG+ G PG  G PG  G  G  G 
Sbjct: 108 PGSEGPAGDKGQKGDPGPYGQRGAKGERGLQGMHGLPGIAGIPGSAGNPGAPGLNGKDGC 167

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G P   G+PG +G  G +G  GYPG  G  G  G P +   +   G  G  G  G+ G 
Sbjct: 168 DGSP---GLPGLQGLSGMQGPRGYPGIAGAKGEKGEPAKENGNYAKGEKGEPGFSGRSGY 224

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING----------VPGTPAICAYKRESCSLL 275
            G  G PG  G  GE G  G +G RG  G+ G           PG       K E    L
Sbjct: 225 AGPQGAPGEKGQRGETGPYGAKGPRGDYGLKGEKGDSCFGPLKPGDKGDKGEKGEPAVKL 284

Query: 276 PNSETSQLLIP 286
           P++  S  L P
Sbjct: 285 PSTGVSIELGP 295



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/119 (44%), Positives = 69/119 (57%), Gaps = 3/119 (2%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG  G  G  G  G  G  G+ G+ G+KG PGV  PPG +G PG  G+ G KG+ G  G
Sbjct: 1428 PPGPAGERGFPGPKGLNGRDGLPGQPGQKGEPGVRPPPGAKGEPGQPGRDGQKGEPGLEG 1487

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLP 226
             +G+ G +G+RG KG+ G  G+ GL GR G     GE GL G+ G  G+ G+ G+ G P
Sbjct: 1488 QRGLIGIQGERGEKGERGLIGQSGLVGRPGPKGDRGEQGLVGLEGAVGLQGLKGEPGAP 1546



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 92/210 (43%), Gaps = 59/210 (28%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           + ++G        CP G +G  G +G  G  G +G +G  GE+G P              
Sbjct: 559 MGIKGDVGGKCSLCPQGQKGDKGTRGLDGIPGNVGARGPPGERGYP-------------- 604

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGDMGYPGR 192
            G+RG  G  G  GP G+ G++G                         +G KG+ GYPG 
Sbjct: 605 -GERGSDGINGQTGPPGLRGEDGVPGVPGPVGEAGQNAIQNLSLVIPHKGEKGNPGYPGA 663

Query: 193 IGLD---GRDGLPGEPGLD---GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT-- 244
            G+    GRDG+PG+PG+    GI G  G+ G PG DG P   G PG +G NG  G+T  
Sbjct: 664 AGVKGERGRDGIPGQPGIKGEFGIKGDKGLTGFPGADGAP---GAPGRDGYNGAPGLTIK 720

Query: 245 ---------GPRGNRGKSGINGVPGTPAIC 265
                    G +G++G SG  G  G P  C
Sbjct: 721 GEPGTPGYDGLKGDKGTSGYVGQKGEPGTC 750



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 75/172 (43%), Gaps = 37/172 (21%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR------G 182
           E+G +GE G+KG PG+ G  G  G  GD G  G KG+ G P   G PGD G++      G
Sbjct: 292 ELGPRGEEGQKGEPGLPGRKGEAGQVGDTGLDGQKGEKGLP---GGPGDRGRQGNFGQPG 348

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI----------------------- 219
           P G  G  G  GL+G  G PG+ G  G PG  G  G+                       
Sbjct: 349 PSGQKGDRGETGLNGLPGNPGQKGEPGRPGSTGQQGLVGPPGPPGGGRGTPGPSGPKGPR 408

Query: 220 -----PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                PG  GL G DG PG  G  G+KG TG  G  G  G+ G  G   I  
Sbjct: 409 GYAGPPGPQGLNGADGQPGLQGYPGQKGGTGMPGRPGGEGLPGQKGEKGIGG 460



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 85/196 (43%), Gaps = 49/196 (25%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G +G  GA G+ G++G  G+KG  G+ G PG +G+PG +G++G         
Sbjct: 407 PRGYAGPPGPQGLNGADGQPGLQGYPGQKGGTGMPGRPGGEGLPGQKGEKG--------- 457

Query: 171 PQGIPGDEGKRGP------------------KGDMGYP--GRIGLDGRDGLPGEPGLDGI 210
                   G+ GP                  KGD G P  G  G  G DG PG PGL G 
Sbjct: 458 ------IGGRDGPQGPVGPVGHPGPPGPEGQKGDSGQPGYGTQGPKGNDGYPGRPGLPGA 511

Query: 211 PGRNGMDGIPG-----KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G  G  G+ G     K G PG+ GI G  G  G+ G  G  G +G+ GI G  G     
Sbjct: 512 KGERGFKGVAGVPGDSKLGRPGETGIAGAPGQKGDAGRPGTPGQKGEMGIKGDVGG---- 567

Query: 266 AYKRESCSLLPNSETS 281
                 CSL P  +  
Sbjct: 568 -----KCSLCPQGQKG 578



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 86/196 (43%), Gaps = 50/196 (25%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQGIPGDEGKRGPKGDMG 167
           G QGP G  G  G  G  G KGERG KG  GV     +G PG  GI G  G+   KGD G
Sbjct: 492 GTQGPKGNDGYPGRPGLPGAKGERGFKGVAGVPGDSKLGRPGETGIAGAPGQ---KGDAG 548

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            PG    PG +G+ G KGD+G    +   G+ G  G  GLDGIPG  G  G PG+ G PG
Sbjct: 549 RPG---TPGQKGEMGIKGDVGGKCSLCPQGQKGDKGTRGLDGIPGNVGARGPPGERGYPG 605

Query: 228 KDGIPGTNGT------------------------------------NGEKGMT---GPRG 248
           + G  G NG                                      GEKG     G  G
Sbjct: 606 ERGSDGINGQTGPPGLRGEDGVPGVPGPVGEAGQNAIQNLSLVIPHKGEKGNPGYPGAAG 665

Query: 249 NRGKSGINGVPGTPAI 264
            +G+ G +G+PG P I
Sbjct: 666 VKGERGRDGIPGQPGI 681



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 83/212 (39%), Gaps = 78/212 (36%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+KG  G  G  GVKGERG  G PG  G      I G+ G +G KG  G+PG  G PG  
Sbjct: 653 GEKGNPGYPGAAGVKGERGRDGIPGQPG------IKGEFGIKGDKGLTGFPGADGAPG-- 704

Query: 179 GKRGPKGDMGYPGRIGLDGRDGL-----PGEPGLDGIPGRNGMDGIPGKDGLPG------ 227
                      PGR G +G  GL     PG PG DG+ G  G  G  G+ G PG      
Sbjct: 705 ----------APGRDGYNGAPGLTIKGEPGTPGYDGLKGDKGTSGYVGQKGEPGTCEIDD 754

Query: 228 -------------KDGIPGTNGTNGEKG------------------------MTGPRG-- 248
                        + G+PG  G  GEKG                        +TGPRG  
Sbjct: 755 LRMPAKGSKGERGETGMPGPEGPKGEKGNFGLRGEKGATGPQGPVGPVGPRGLTGPRGEK 814

Query: 249 ----------NRGKSGINGVPGTPAICAYKRE 270
                     N GK+G+ G+PG       K E
Sbjct: 815 GHSGPIGAPGNAGKNGLRGLPGRDGARGQKGE 846



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 30/142 (21%)

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            I G  G+ G KG+ G PG  G+PG++G+RG  G+ G  G  G+ G  G  G PG+ G+PG
Sbjct: 929  IDGVRGRDGAKGEPGNPGLVGMPGNKGERGAPGNDGPKGFNGIAGMPGKRGSPGIPGVPG 988

Query: 213  RNGMDGIPGKDGLP------------------------GKDGIPGTNGTNGEKGMTGPRG 248
              G  G PG  G+                         G  G PG +G NGEK      G
Sbjct: 989  AKGEKGTPGLTGISGAVGGRGAPGPPGLMGVKGDQGPIGAPGEPGLDGLNGEK------G 1042

Query: 249  NRGKSGINGVPGTPAICAYKRE 270
            N+G  G++G PG P   + K +
Sbjct: 1043 NQGLPGMDGAPGLPGDASEKGQ 1064


>gi|296229921|ref|XP_002760493.1| PREDICTED: collagen alpha-1(XXVII) chain-like [Callithrix jacchus]
          Length = 647

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/145 (45%), Positives = 83/145 (57%), Gaps = 9/145 (6%)

Query: 133 KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G EG +G +G  G 
Sbjct: 141 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGA 200

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
           PGR G+ G  GLPG     G+ GR G +GI G DGLPG+DG  G  G    +G+ G  GP
Sbjct: 201 PGRRGVQGLQGLPGP---RGVVGRQGPEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 257

Query: 247 RGNRGKSGINGVPGTPAICAYKRES 271
            G RG  G+ G+PG      +K ES
Sbjct: 258 AGKRGNPGVAGLPGAQGPPGFKGES 282



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 89/175 (50%), Gaps = 30/175 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------------ 154
           G +GP G++G+ GA G  GV+G +G  G  GVVG  GP+GI                   
Sbjct: 187 GAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGPEGIAGPDGLPGRDGQAGQQGEQ 246

Query: 155 ---GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRDGLP--- 202
              GD G  GP G  G PG  G+PG +G  G KG+ G PG++      G +GR GLP   
Sbjct: 247 GDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPHGKRGTEGRTGLPGNQ 306

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  GK GI G
Sbjct: 307 GEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIG 361



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 88/181 (48%), Gaps = 18/181 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            +QG      +   PG  GP G+ G  G+KG  G KG++G+ GAPG  G  G QG+PG  
Sbjct: 157 GVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPR 216

Query: 158 GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G  G +G  G  GP G+P               GD G  GP G  G PG  GL G  G P
Sbjct: 217 GVVGRQGPEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 276

Query: 203 GEPGLDGIPGR---NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G  G  G+PG+   +G  G  G+ GLPG  G PG+ G  G+ G  G  G  G  G  G P
Sbjct: 277 GFKGESGLPGQLGPHGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPP 336

Query: 260 G 260
           G
Sbjct: 337 G 337



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 82/154 (53%), Gaps = 12/154 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G+ G +G  G  G++G+ G PG  G PGP+G  G EG +G +G  G PG +G+ G +
Sbjct: 151 GYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQ 210

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGL---------DGIP---GRNGMDGIPGKDGLP 226
           G  GP+G +G  G  G+ G DGLPG  G          DG P   G  G  G PG  GLP
Sbjct: 211 GLPGPRGVVGRQGPEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLP 270

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 271 GAQGPPGFKGESGLPGQLGPHGKRGTEGRTGLPG 304



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 79/143 (55%), Gaps = 12/143 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G++G  G  G  G +G    +GE G PG +GP          GKRG +G  G 
Sbjct: 252 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGP---------HGKRGTEGRTGL 302

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G+ GK+G+ G 
Sbjct: 303 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGP 362

Query: 229 DGIPGTNGTNGEKGMTGPRGNRG 251
            GI G +G  G KG  G RG+ G
Sbjct: 363 LGILGPSGLPGPKGDKGSRGDWG 385



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 87/207 (42%), Gaps = 58/207 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------GPPGPQGI 153
           PGL GP G+ G+ G KG  G KG +G +G  G +                  G  GP G 
Sbjct: 23  PGLAGPEGKSGKQGEKGRTGAKGTKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGA 82

Query: 154 PGDEGKRGPKGDMGYPGPQGI---------------PGDEGK------------------ 180
           PG  G +G  G  GY G +GI                G++GK                  
Sbjct: 83  PGRMGTQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDPGPVGDRG 142

Query: 181 -RGPKGDMGYPGRIGLD------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            RG  GD GYPG+ G+       G+ G PG PG  G PG  G  G  G  G  GK G PG
Sbjct: 143 DRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGRPGPKGSKGAEGPKGKQGKAGAPG 202

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G +G+ GPRG  G+ G  G+ G
Sbjct: 203 RRGVQGLQGLPGPRGVVGRQGPEGIAG 229



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 57/118 (48%), Gaps = 18/118 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA------KGEMGVKGE---RGEKGAPGVVG 146
           L   QG      E   PG  GP G++G  G       +GE G KG+    GE G PG+ G
Sbjct: 269 LPGAQGPPGFKGESGLPGQLGPHGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAG 328

Query: 147 PPGPQGIPGD------EGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
             GP+G PGD      +G RGP G MG     GP GI G  G  GPKGD G  G  GL
Sbjct: 329 LFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPLGILGPSGLPGPKGDKGSRGDWGL 386


>gi|270007644|gb|EFA04092.1| hypothetical protein TcasGA2_TC014326 [Tribolium castaneum]
          Length = 1814

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/186 (43%), Positives = 93/186 (50%), Gaps = 41/186 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++G  G  G  G  G  G+ GERG+ G PG+ GPPGPQG+    G RGPKG  G  GPQ
Sbjct: 953  GIEGLPGHHGRAGLSGVQGLPGERGDIGLPGLRGPPGPQGL---LGPRGPKGLEGDRGPQ 1009

Query: 173  GIPGD---EGKRGPKGDMGYPGRIGLDGRD------------GLPGEPGLD--------- 208
            G PG+    G+ GP+GD GYPG  G  G              GL GEPG D         
Sbjct: 1010 GFPGEMGIPGESGPRGDSGYPGIKGPKGESAISGPKGEYGEPGLIGEPGFDGEPGLPGPP 1069

Query: 209  -----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                       G PG  G  GIP   G PG+DG  G  G  GE G+ G RG  G+SGI G
Sbjct: 1070 GLPGDRGLDIYGPPGPKGNLGIP---GFPGRDGEVGLKGERGEGGIDGLRGAPGESGIRG 1126

Query: 258  VPGTPA 263
             PGTP 
Sbjct: 1127 APGTPG 1132



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 104/218 (47%), Gaps = 31/218 (14%)

Query: 86  VWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV 145
           V L+ +   P   ++G        C PGL G   QKGE G  G  G  G  G +G PG  
Sbjct: 527 VGLHGFDGFP--GLKGRKGDDCGVCLPGLPG---QKGEAGEYGRNGRPGTIGYQGLPGPR 581

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG--------------PKGDM---G 188
           GP GPQG  G EG+RG +G  G PG QG PG +G RG               KG+M   G
Sbjct: 582 GPRGPQGKEGKEGERGLEGTPGTPGLQGAPGTKGARGLLIFPDPSTKEAEAEKGEMGERG 641

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG------ 242
           +PG +G DG  G  G PG  G+PG  G  G  G  GLPG DG+PG NG  G+KG      
Sbjct: 642 FPGLMGGDGEFGPRGLPGDAGVPGFKGESGEIGTPGLPGLDGVPGINGIPGQKGEPHDIP 701

Query: 243 ---MTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
              + G  G  G  GI GV G   +     +S S + N
Sbjct: 702 KEYLRGDYGLTGVPGIKGVKGDKGMMGLPGDSVSNIAN 739



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 88/163 (53%), Gaps = 25/163 (15%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            Y PPG +G +G  G  G  GE+G+KGERGE G  G+ G PG  GI         +G  G 
Sbjct: 1080 YGPPGPKGNLGIPGFPGRDGEVGLKGERGEGGIDGLRGAPGESGI---------RGAPGT 1130

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG  G+ G +G+RG  G  G+PG +         GEPG++G PGR G  G+PG  G PG 
Sbjct: 1131 PGWNGLNGTKGERGDYGSPGFPGNV---------GEPGMEGEPGRMGRPGMPGDIGFPGI 1181

Query: 229  DGIPGTNGTNGEKGMT-------GPRGNRGKSGINGVPGTPAI 264
             G  G+ G  G +G+        G +G+ G++G +G+PG   I
Sbjct: 1182 SGPQGSVGPKGNQGLPGLAPFGFGEKGDLGETGFHGLPGNKGI 1224



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 88/180 (48%), Gaps = 13/180 (7%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQ 151
           +P  ++    N T +   PG+QG  G  G  G  G  G  G+ G  G PG    GPPG  
Sbjct: 729 LPGDSVSNIANVTGDIGYPGIQGERGPPGRTGRNGAPGPMGKEGLPGVPGSSPTGPPGEP 788

Query: 152 G------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G      IPGD G RG  G  G PG  G PG  G +G +GD G   RI L+G  G  G P
Sbjct: 789 GVRGYPGIPGDAGPRGLPGMPGMPGLDGYPGTPGNKGERGDPGL--RI-LNGEMGPQGPP 845

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI--NGVPGTPA 263
           G+ G PG  G DG PG  G+PG  G+ G  G  G  G+ G  G +G  GI   G PG P 
Sbjct: 846 GIKGEPGDFGPDGYPGIPGIPGVKGVRGPKGAPGFAGLPGAPGAKGMQGIMRPGFPGQPG 905



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 93/212 (43%), Gaps = 49/212 (23%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------ 151
              G      E+ P GL G  G  G  G  GE+G  G  G  G PG+ G PG +      
Sbjct: 641 GFPGLMGGDGEFGPRGLPGDAGVPGFKGESGEIGTPGLPGLDGVPGINGIPGQKGEPHDI 700

Query: 152 ------------GIPGDEGKRGPKGDMGYPGPQ-----------GIPGDEGKRGPKGDMG 188
                       G+PG +G +G KG MG PG             G PG +G+RGP G  G
Sbjct: 701 PKEYLRGDYGLTGVPGIKGVKGDKGMMGLPGDSVSNIANVTGDIGYPGIQGERGPPGRTG 760

Query: 189 YPGRIGLDGRDGLPGEP--------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
             G  G  G++GLPG P              G  GIPG  G  G+PG  G+PG DG PGT
Sbjct: 761 RNGAPGPMGKEGLPGVPGSSPTGPPGEPGVRGYPGIPGDAGPRGLPGMPGMPGLDGYPGT 820

Query: 235 NGTNGEKG------MTGPRGNRGKSGINGVPG 260
            G  GE+G      + G  G +G  GI G PG
Sbjct: 821 PGNKGERGDPGLRILNGEMGPQGPPGIKGEPG 852



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 79/163 (48%), Gaps = 13/163 (7%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G +GE G  G  G  GAPG +G  G  G+PG      P G  G PG +G PG  G  GP+
Sbjct: 748 GIQGERGPPGRTGRNGAPGPMGKEGLPGVPGSS----PTGPPGEPGVRGYPGIPGDAGPR 803

Query: 185 GDMGYPGRIGLDGRDGLPG------EPGLDGIPGRNGMDGIPGKDGLPG---KDGIPGTN 235
           G  G PG  GLDG  G PG      +PGL  + G  G  G PG  G PG    DG PG  
Sbjct: 804 GLPGMPGMPGLDGYPGTPGNKGERGDPGLRILNGEMGPQGPPGIKGEPGDFGPDGYPGIP 863

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
           G  G KG+ GP+G  G +G+ G PG   +    R      P S
Sbjct: 864 GIPGVKGVRGPKGAPGFAGLPGAPGAKGMQGIMRPGFPGQPGS 906



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 90/188 (47%), Gaps = 28/188 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G      +Y  PG  G +G+ G  G  G MG  G  G+ G PG+ GP G  G  G++
Sbjct: 1135 GLNGTKGERGDYGSPGFPGNVGEPGMEGEPGRMGRPGMPGDIGFPGISGPQGSVGPKGNQ 1194

Query: 158  G-------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G         G KGD+G  G  G+PG++G RG   D G+ G  GL G  G  G+PGL G 
Sbjct: 1195 GLPGLAPFGFGEKGDLGETGFHGLPGNKGIRG---DDGFYGPPGLKGPTGDSGQPGLQGE 1251

Query: 211  PGRNGMDGI------------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            PG  G+ G                   PG+ G PG DG+PG  G  G+KG  G  G  G 
Sbjct: 1252 PGYPGIKGTFGDSGEPGPPGLPGRNPQPGEPGRPGFDGLPGRAGRPGQKGAPGEYGPDGP 1311

Query: 253  SGINGVPG 260
             GI+G PG
Sbjct: 1312 PGISGTPG 1319



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 83/154 (53%), Gaps = 12/154 (7%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
             G+KG++G  G  G+ G +G +G  G  GPPG +G  GD G+ G +G+ GYPG +G  GD
Sbjct: 1204 FGEKGDLGETGFHGLPGNKGIRGDDGFYGPPGLKGPTGDSGQPGLQGEPGYPGIKGTFGD 1263

Query: 178  EGK--------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG-- 227
             G+        R P+   G PGR G DG  G  G PG  G PG  G DG PG  G PG  
Sbjct: 1264 SGEPGPPGLPGRNPQ--PGEPGRPGFDGLPGRAGRPGQKGAPGEYGPDGPPGISGTPGFS 1321

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             DG  G  G +G  G+ G  G  G+ GI G+PG 
Sbjct: 1322 MDGEKGDIGDSGYPGLPGSPGLEGRPGIPGIPGV 1355



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 78/152 (51%), Gaps = 33/152 (21%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGA------------------PGVVGPPGPQGIPGDEGKR 160
            G++GE G +G  G+ G +GE+G                   PG VGPPG    PG  G +
Sbjct: 1374 GERGEPGYRGAPGLNGTKGERGDFGVTGPPGPPGEEGLPGFPGDVGPPG---YPGASGVK 1430

Query: 161  GPKGDMG------YPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            GPKGD G       PGP    G+PG +G  G +G  G PG  GL GR G+ G+ G+DG+P
Sbjct: 1431 GPKGDRGDWSINALPGPLGDAGLPGFDGLPGFQGLPGEPGFPGLIGRKGMRGDAGIDGLP 1490

Query: 212  G---RNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            G     GM G+PG  GLPG  G  G  G  GE
Sbjct: 1491 GFEGPKGMAGLPGLAGLPGLQGARGAPGVRGE 1522



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 91/211 (43%), Gaps = 64/211 (30%)

Query: 111  PPGLQGPI-----GQKGEIGAKGEMGVKGERGEKGAPGVV---------GPPGP------ 150
            PPG+ G       G+KG+IG  G  G+ G  G +G PG+          GPPG       
Sbjct: 1311 PPGISGTPGFSMDGEKGDIGDSGYPGLPGSPGLEGRPGIPGIPGVTGLKGPPGDYGFSAI 1370

Query: 151  -----------QGIPGDEGKRGPKGDM------------------------GYPGPQGIP 175
                       +G PG  G +G +GD                         GYPG  G+ 
Sbjct: 1371 TFKGERGEPGYRGAPGLNGTKGERGDFGVTGPPGPPGEEGLPGFPGDVGPPGYPGASGVK 1430

Query: 176  GDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G +G R         GP GD G PG  GL G  GLPGEPG  G+ GR GM G  G DGLP
Sbjct: 1431 GPKGDRGDWSINALPGPLGDAGLPGFDGLPGFQGLPGEPGFPGLIGRKGMRGDAGIDGLP 1490

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G +G  G  G  G  G+ G +G RG  G+ G
Sbjct: 1491 GFEGPKGMAGLPGLAGLPGLQGARGAPGVRG 1521



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 89/200 (44%), Gaps = 40/200 (20%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVGPPGPQGI 153
            Y PPGL+GP G  G+ G +GE G  G +G  G                PG  G PG  G+
Sbjct: 1231 YGPPGLKGPTGDSGQPGLQGEPGYPGIKGTFGDSGEPGPPGLPGRNPQPGEPGRPGFDGL 1290

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRG-----PKGDMGYPGRIGLDGRDGLPGEPGLD 208
            PG  G+ G KG  G  GP G PG  G  G      KGD+G  G  GL G  GL G PG+ 
Sbjct: 1291 PGRAGRPGQKGAPGEYGPDGPPGISGTPGFSMDGEKGDIGDSGYPGLPGSPGLEGRPGIP 1350

Query: 209  GIPGRNGMDGIPG-----------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS---- 253
            GIPG  G+ G PG           + G PG  G PG NGT GE+G  G  G  G      
Sbjct: 1351 GIPGVTGLKGPPGDYGFSAITFKGERGEPGYRGAPGLNGTKGERGDFGVTGPPGPPGEEG 1410

Query: 254  -----GINGVPGTPAICAYK 268
                 G  G PG P     K
Sbjct: 1411 LPGFPGDVGPPGYPGASGVK 1430



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 79/183 (43%), Gaps = 56/183 (30%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +G+ G  G  G KG  G+KG  G  GPPG QG PG  G  G KGD G PG +G PG +
Sbjct: 283 GYQGDKGFPGFPGPKGRAGDKGEQGDDGPPGKQGRPGPFGPSGEKGDKGAPGYEGTPGFD 342

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPG------------------------EPGLDGIPGR- 213
           G+ GP+G+ G  G  G+ GR G PG                        E G+ GIPGR 
Sbjct: 343 GETGPRGEDGNRGTPGVQGRSGPPGKYDPFLDEIFEGSPGIQGPEGPVGERGMSGIPGRP 402

Query: 214 -------------------------------NGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                                           G DG+PG+ G  G  G+PG  G  GEKG
Sbjct: 403 GLSGPIGPPGPPGPPGIPGLAGPKGLTIKGERGTDGLPGRPGNTGPPGLPGAMGILGEKG 462

Query: 243 MTG 245
            TG
Sbjct: 463 FTG 465



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 81/158 (51%), Gaps = 22/158 (13%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP---GPQGIP 175
           GQ GE G+ GE G +G+ GE+G PGV      +G PG +G+ GP G  G     G  G  
Sbjct: 84  GQGGEYGSPGERGSRGDDGERGLPGV------EGRPGYQGEAGPMGPPGLDGCNGTDGAQ 137

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP-----------GRNGMDGIPGKDG 224
           G +G RG +G  G PG  GL G  G PGE G + I            G  G+DG  G  G
Sbjct: 138 GAQGARGLQGIRGLPGPQGLQGFRGEPGEGGGNSIGTKGDRGDGAYDGPPGLDGFRGPTG 197

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKS--GINGVPG 260
            PG+ G PG  G  GE+G  GP G+ G S  G+ G PG
Sbjct: 198 PPGRIGEPGYEGIVGEQGFWGPPGDIGDSIKGLKGQPG 235



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 104/249 (41%), Gaps = 96/249 (38%)

Query: 112  PGLQGPIGQKGEIG---------AKGEMGV---------------KGERGEKGAPGV--- 144
            PG  G +G KGE G         A GE G+               KGERG+ G+PG    
Sbjct: 1095 PGRDGEVGLKGERGEGGIDGLRGAPGESGIRGAPGTPGWNGLNGTKGERGDYGSPGFPGN 1154

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYP---GPQ----------------------------- 172
            VG PG +G PG  G+ G  GD+G+P   GPQ                             
Sbjct: 1155 VGEPGMEGEPGRMGRPGMPGDIGFPGISGPQGSVGPKGNQGLPGLAPFGFGEKGDLGETG 1214

Query: 173  --GIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGI----------------- 210
              G+PG++G RG  G  G P   G  G  G+ GL GEPG  GI                 
Sbjct: 1215 FHGLPGNKGIRGDDGFYGPPGLKGPTGDSGQPGLQGEPGYPGIKGTFGDSGEPGPPGLPG 1274

Query: 211  -------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG--------MTGPRGNRGKSGI 255
                   PGR G DG+PG+ G PG+ G PG  G +G  G        M G +G+ G SG 
Sbjct: 1275 RNPQPGEPGRPGFDGLPGRAGRPGQKGAPGEYGPDGPPGISGTPGFSMDGEKGDIGDSGY 1334

Query: 256  NGVPGTPAI 264
             G+PG+P +
Sbjct: 1335 PGLPGSPGL 1343



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 82/179 (45%), Gaps = 35/179 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV--KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG-- 167
            PG+ G  G KG  G  G   +  KGERGE         PG +G PG  G +G +GD G  
Sbjct: 1350 PGIPGVTGLKGPPGDYGFSAITFKGERGE---------PGYRGAPGLNGTKGERGDFGVT 1400

Query: 168  -------------YPG---PQGIPGDEGKRGPKGDMG------YPGRIGLDGRDGLPGEP 205
                         +PG   P G PG  G +GPKGD G       PG +G  G  G  G P
Sbjct: 1401 GPPGPPGEEGLPGFPGDVGPPGYPGASGVKGPKGDRGDWSINALPGPLGDAGLPGFDGLP 1460

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+PG  G  G+ G+ G+ G  GI G  G  G KGM G  G  G  G+ G  G P +
Sbjct: 1461 GFQGLPGEPGFPGLIGRKGMRGDAGIDGLPGFEGPKGMAGLPGLAGLPGLQGARGAPGV 1519



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 87/188 (46%), Gaps = 32/188 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA-----PGVVGPPGPQGIPGDEGKRGP---- 162
            PG+ G  G +G  GA G  G+ G  G KG      PG  G PG  G+PG  G+ G     
Sbjct: 863  PGIPGVKGVRGPKGAPGFAGLPGAPGAKGMQGIMRPGFPGQPGSLGLPGTPGRYGDTGQK 922

Query: 163  --------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---- 204
                          KG+ G  G +G PGDEG    +G  G+ GR GL G  GLPGE    
Sbjct: 923  GEPGFPGGPGYDGMKGEPGLWGLRGQPGDEGI---EGLPGHHGRAGLSGVQGLPGERGDI 979

Query: 205  --PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
              PGL G PG  G+ G  G  GL G  G  G  G  G  G +GPRG+ G  GI G  G  
Sbjct: 980  GLPGLRGPPGPQGLLGPRGPKGLEGDRGPQGFPGEMGIPGESGPRGDSGYPGIKGPKGES 1039

Query: 263  AICAYKRE 270
            AI   K E
Sbjct: 1040 AISGPKGE 1047



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 83/182 (45%), Gaps = 32/182 (17%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E+ P G  G  G  G  G  G  G+KG +G+     + G PG +G  G+ G+ G  G +G
Sbjct: 514 EFGPRGFPGSPGDVGLHGFDGFPGLKGRKGDDCGVCLPGLPGQKGEAGEYGRNGRPGTIG 573

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------------------------- 202
           Y   QG+PG  G RGP+G  G  G  GL+G  G P                         
Sbjct: 574 Y---QGLPGPRGPRGPQGKEGKEGERGLEGTPGTPGLQGAPGTKGARGLLIFPDPSTKEA 630

Query: 203 ----GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
               GE G  G PG  G DG  G  GLPG  G+PG  G +GE G  G  G  G  GING+
Sbjct: 631 EAEKGEMGERGFPGLMGGDGEFGPRGLPGDAGVPGFKGESGEIGTPGLPGLDGVPGINGI 690

Query: 259 PG 260
           PG
Sbjct: 691 PG 692



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 79/164 (48%), Gaps = 25/164 (15%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQ 151
            G    T +   PGLQG  G  G  G  G+ G  G         + GE G PG  G PG  
Sbjct: 1235 GLKGPTGDSGQPGLQGEPGYPGIKGTFGDSGEPGPPGLPGRNPQPGEPGRPGFDGLPGRA 1294

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPG--DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            G PG +G  G  G  G PG  G PG   +G++G  GD GYP   GL G  GL G PG+ G
Sbjct: 1295 GRPGQKGAPGEYGPDGPPGISGTPGFSMDGEKGDIGDSGYP---GLPGSPGLEGRPGIPG 1351

Query: 210  IPGRNGMDGIP-----------GKDGLPGKDGIPGTNGTNGEKG 242
            IPG  G+ G P           G+ G PG  G PG NGT GE+G
Sbjct: 1352 IPGVTGLKGPPGDYGFSAITFKGERGEPGYRGAPGLNGTKGERG 1395



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 86/189 (45%), Gaps = 39/189 (20%)

Query: 125 GAKGEMGVKGERGEKGAPGVV----GPPG---PQGIPGDEGKRGPKGDMGYPGPQG---- 173
           G++GE G  G+ G KG PGV     GPPG   P+G PG  G  G  G  G+PG +G    
Sbjct: 485 GSRGERGGAGDVGPKGYPGVGVPIRGPPGEFGPRGFPGSPGDVGLHGFDGFPGLKGRKGD 544

Query: 174 -----IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIPGKDGL 225
                +PG  G++G  G+ G  GR G  G  GLPG  G  G  G+ G +   G+ G  G 
Sbjct: 545 DCGVCLPGLPGQKGEAGEYGRNGRPGTIGYQGLPGPRGPRGPQGKEGKEGERGLEGTPGT 604

Query: 226 PGKDGIPGTNGTN--------------------GEKGMTGPRGNRGKSGINGVPGTPAIC 265
           PG  G PGT G                      GE+G  G  G  G+ G  G+PG   + 
Sbjct: 605 PGLQGAPGTKGARGLLIFPDPSTKEAEAEKGEMGERGFPGLMGGDGEFGPRGLPGDAGVP 664

Query: 266 AYKRESCSL 274
            +K ES  +
Sbjct: 665 GFKGESGEI 673



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 79/189 (41%), Gaps = 56/189 (29%)

Query: 113 GLQGPIGQKGEIGAKGEMGV--------------------------KGERGEKGAPGVVG 146
           GL G  G  G  G  G MG+                          KG RGE+G  G VG
Sbjct: 438 GLPGRPGNTGPPGLPGAMGILGEKGFTGQTVIGPPGEPGYPGIPGFKGSRGERGGAGDVG 497

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIP--GDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           P                   GYPG  G+P  G  G+ GP+G  G PG +GL G DG PG 
Sbjct: 498 P------------------KGYPG-VGVPIRGPPGEFGPRGFPGSPGDVGLHGFDGFPGL 538

Query: 205 PG---------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G         L G+PG+ G  G  G++G PG  G  G  G  G +G  G  G  G+ G+
Sbjct: 539 KGRKGDDCGVCLPGLPGQKGEAGEYGRNGRPGTIGYQGLPGPRGPRGPQGKEGKEGERGL 598

Query: 256 NGVPGTPAI 264
            G PGTP +
Sbjct: 599 EGTPGTPGL 607



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/122 (45%), Positives = 65/122 (53%), Gaps = 15/122 (12%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP-- 190
           +G +G+KG PG    PGP+G  GD+G+   +GD G PG QG PG  G  G KGD G P  
Sbjct: 282 RGYQGDKGFPGF---PGPKGRAGDKGE---QGDDGPPGKQGRPGPFGPSGEKGDKGAPGY 335

Query: 191 -GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGM 243
            G  G DG  G  GE G  G PG  G  G PGK      +   G  GI G  G  GE+GM
Sbjct: 336 EGTPGFDGETGPRGEDGNRGTPGVQGRSGPPGKYDPFLDEIFEGSPGIQGPEGPVGERGM 395

Query: 244 TG 245
           +G
Sbjct: 396 SG 397



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 80/183 (43%), Gaps = 42/183 (22%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD-----EGKRGPKGDMGYPGPQG 173
            G+ G  G  G  G  G  G+KGAPG  GP GP GI G      +G++G  GD GYPG  G
Sbjct: 1280 GEPGRPGFDGLPGRAGRPGQKGAPGEYGPDGPPGISGTPGFSMDGEKGDIGDSGYPGLPG 1339

Query: 174  IPGDEGK------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG--- 218
             PG EG+            +GP GD G+   I   G  G PG  G  G+ G  G  G   
Sbjct: 1340 SPGLEGRPGIPGIPGVTGLKGPPGDYGFS-AITFKGERGEPGYRGAPGLNGTKGERGDFG 1398

Query: 219  ---------------IPGKDGLPGKDGIPGTNGTNGEKG------MTGPRGNRGKSGING 257
                            PG  G PG  G  G  G  G++G      + GP G+ G  G +G
Sbjct: 1399 VTGPPGPPGEEGLPGFPGDVGPPGYPGASGVKGPKGDRGDWSINALPGPLGDAGLPGFDG 1458

Query: 258  VPG 260
            +PG
Sbjct: 1459 LPG 1461



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 92/217 (42%), Gaps = 67/217 (30%)

Query: 111 PPGLQGPIGQKGE-----IGAKGEMG---------VKGERGEKGAPGVVGPPGPQGIPGD 156
           P GLQG  G+ GE     IG KG+ G         + G RG  G PG +G PG +GI G+
Sbjct: 154 PQGLQGFRGEPGEGGGNSIGTKGDRGDGAYDGPPGLDGFRGPTGPPGRIGEPGYEGIVGE 213

Query: 157 EGKRGPKGDMG--YPGPQGIPGDEG----------------------------------- 179
           +G  GP GD+G    G +G PGD G                                   
Sbjct: 214 QGFWGPPGDIGDSIKGLKGQPGDLGDYGDVGEPGDDEPAPHYPQPSMYEWKGIKGEKGKG 273

Query: 180 -------KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
                  +RG +GD    G+P   G  GR G  GE G DG PG+ G  G  G  G  G  
Sbjct: 274 GYGGITGRRGYQGDKGFPGFP---GPKGRAGDKGEQGDDGPPGKQGRPGPFGPSGEKGDK 330

Query: 230 GIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
           G PG  GT G  G TGPR   GNRG  G+ G  G P 
Sbjct: 331 GAPGYEGTPGFDGETGPRGEDGNRGTPGVQGRSGPPG 367


>gi|149029108|gb|EDL84402.1| procollagen, type I, alpha 2 [Rattus norvegicus]
          Length = 669

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 90/178 (50%), Gaps = 21/178 (11%)

Query: 112 PGLQGPIGQKGEIGAKG------------EMGVKGERGEKGAPGVVGPPG---PQGIPGD 156
           PG  GP G +GE G  G              G+ G +G  G PGV G PG   P+GIPG 
Sbjct: 279 PGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGP 338

Query: 157 ---EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGI 210
               G  GP+G +G PGP G  G+ G +G  G  G    PG  G +G+ G PGEPG  G 
Sbjct: 339 VGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGP 398

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G+ G PG  GLPG DG  G  G  G +G TGP G RG +G  G PG P +   +
Sbjct: 399 AGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGPR 456



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/140 (47%), Positives = 77/140 (55%), Gaps = 3/140 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G  GE G +G  G  G  G  G PG+ G PG +G+PG +G+    G MG PG +
Sbjct: 373 GAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGR---AGVMGPPGNR 429

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G  G RGP GD G PG  GL G  GLPG PG  G  G+ G  G+PG DG PG  G  
Sbjct: 430 GSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPA 489

Query: 233 GTNGTNGEKGMTGPRGNRGK 252
           G  G  G  G  GP+G  G+
Sbjct: 490 GPRGEAGNIGFPGPKGPSGE 509



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 80/148 (54%), Gaps = 15/148 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G  G +GA G  G +G  GE G PG  GP G +G  G  GK    G+ G+PG  
Sbjct: 100 GLMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGK---AGEDGHPGKP 156

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKD 229
           G PG+ G  GP+G  G+P         G PG PG  GI G NG+DG+   PG  G+ G+ 
Sbjct: 157 GRPGERGVVGPQGARGFP---------GTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEP 207

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G PG NGT G+ G  G  G RG+ G  G
Sbjct: 208 GAPGENGTPGQAGARGLPGERGRVGAPG 235



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 80/153 (52%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G   +     P G QGP G+ GE G  G  G +G  G  G  G  G PG  G PG
Sbjct: 101 LMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKPGRPG 160

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           + G  GP+G  G+PG  G+PG +G RG  G  G  G+ G  G  G PG PG +G PG+ G
Sbjct: 161 ERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGENGTPGQAG 220

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+PG+ G  G  G  G  G++G  G  GP G
Sbjct: 221 ARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG 253



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 70/130 (53%), Gaps = 12/130 (9%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGP---KGDMGYPGRIGLDGR 198
           PGP G+    G RGP G +G PGPQG       PG+ G+ GP   +G  G PG+ G DG 
Sbjct: 96  PGPMGL---MGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGH 152

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G PG PG  G+ G  G  G PG  GLPG  GI G NG +G KG  G +G +G+ G  G 
Sbjct: 153 PGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGE 212

Query: 259 PGTPAICAYK 268
            GTP     +
Sbjct: 213 NGTPGQAGAR 222



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 93/190 (48%), Gaps = 18/190 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G  G +GA G  G +G  GE G  G  G  G +G PG  G +GP G  G  G 
Sbjct: 327 PGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGK 386

Query: 172 QGIPGDEGKRGPKGD---MGYPGRIGL---DGRDGLPGEP------GLDGIPGRNGMDGI 219
           +G PG+ G  GP G     G PG  GL   DGR G+ G P      G  G+ G NG  G 
Sbjct: 387 RGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGR 446

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL---LP 276
           PG+ GL G  G+PG+ G  G  G  GP    G  GI+G PG       + E+ ++    P
Sbjct: 447 PGEPGLMGPRGLPGSPGNVGPAGKEGP---VGLPGIDGRPGPIGPAGPRGEAGNIGFPGP 503

Query: 277 NSETSQLLIP 286
              + +L +P
Sbjct: 504 KGPSGELQVP 513



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 80/185 (43%), Gaps = 39/185 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMG- 167
           PG QG    KGE GA GE G  G+ G +G PG    VG PGP G  G +G  GP G  G 
Sbjct: 198 PGAQG---VKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGP 254

Query: 168 -----------------YPGPQGIPGDEGKRGPKGDMGYPGR---------------IGL 195
                              GP G PG  G  GP+G+ G PG                 G 
Sbjct: 255 IGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTGA 314

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  GLPG  G  G+PG  G+ G  G  G  G  G+ G  G  G KG TG +G  G +G 
Sbjct: 315 KGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGA 374

Query: 256 NGVPG 260
            G PG
Sbjct: 375 QGPPG 379



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 83/198 (41%), Gaps = 54/198 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
           PG +G  G  G  G KG+ G +G +GE GAPG        G PG  G R   G +G +G 
Sbjct: 180 PGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGE------NGTPGQAGARGLPGERGRVGA 233

Query: 169 PGPQGI---------------------------------------PGDEGKRGPKGDMGY 189
           PGP G                                        PG  G  GP+G+ G 
Sbjct: 234 PGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGL 293

Query: 190 PG------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           PG        G  G +GL G  G  G+PG  G  G+PG  G+PG  G  G  G  G  G 
Sbjct: 294 PGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGE 353

Query: 244 TGPRGNRGKSGINGVPGT 261
            GP G++G++G  G PG+
Sbjct: 354 PGPAGSKGETGNKGEPGS 371


>gi|2370202|emb|CAA75002.1| procollagen alpha 2(V) [Homo sapiens]
          Length = 1496

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 90/177 (50%), Gaps = 15/177 (8%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +G      E  P G+QGPIG  GE         +G+RG +G PG +GPPGP G  G  
Sbjct: 471 GFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTLGPPGPVGERGAP 521

Query: 158 GKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G  
Sbjct: 522 GNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPE 581

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+ G  G  G  G P +   +
Sbjct: 582 GKLGPLGAPGEDGRPGPPGSIGIKGQPGTMGLPGPKGSNGDPGKPGEAGNPGVPGQR 638



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 87/207 (42%), Gaps = 57/207 (27%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIG------------AKGEMGVKGERGEKGAPGV- 144
            M+G    T    P   +GP GQ+GE G            A G  G  G +G  G+PG  
Sbjct: 384 GMKGEAGPTGARGP---EGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGPKGPTGSPGTS 440

Query: 145 -----------------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKR 181
                             GP G  G+PGD G +G  G  G PGP GI      PG+EGKR
Sbjct: 441 GPPGSAGPPGSPGPQGSTGPQGNSGLPGDPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKR 500

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP+GD                  PG  G PG  G  G PG  G PG DG+PG  G  GE+
Sbjct: 501 GPRGD------------------PGTLGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGER 542

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G +G  G  G PG P +   +
Sbjct: 543 GPVGSSGPKGSQGDPGRPGEPGLPGAR 569



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 89/198 (44%), Gaps = 54/198 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPKGDM-- 166
           PG+ G  G+KG  G  G  G KG  G  G PG  GPPG QG+PG+    G  GPKGD   
Sbjct: 719 PGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGG 778

Query: 167 ----------------------------------GYPGPQGI---------PGDEGKRGP 183
                                             G PGP+G+         PG  G+ GP
Sbjct: 779 IGEKGAEGTAGNDGAGGLPGPLGPPGPAGLLGEKGEPGPRGLVGPPGSRGNPGSRGENGP 838

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G +G+ G  G DG+ G+ GEPG    PG+ G  G PG  GL    G PG +G NG  G+
Sbjct: 839 TGAVGFAGPQGSDGQPGVKGEPGE---PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGL 892

Query: 244 TGPRGNRGKSGINGVPGT 261
            G RG +G  G  G PG+
Sbjct: 893 KGGRGTQGPPGATGFPGS 910



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 326

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 387 GEAGPTGARGPEGPQGQRGET 407



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 986  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1039

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1040 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1099

Query: 220  PGKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1100 PGSRGPIGHLGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1143



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 93/213 (43%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    KG PG +G PGP+G  GD GK G  G+ G 
Sbjct: 575 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIKGQPGTMGLPGPKGSNGDPGKPGEAGNPGV 634

Query: 169 PGPQGIP------------------GDEGKRGP--------------------------- 183
           PG +G P                  G+ G++GP                           
Sbjct: 635 PGQRGAPGKDGKVGPYGPPGPPGLRGERGEQGPPGPTGFQGHPGPPGPPGEGGKPGDQGV 694

Query: 184 ------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                       +G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 695 PGGPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 754

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 755 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 787



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 70/117 (59%), Gaps = 9/117 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+ G +GP+G +G   P 
Sbjct: 531 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLG---PL 587

Query: 173 GIPGDEGKRGPKGDMG---YPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G PG++G+ GP G +G    PG +GL    G +G PG+PG  G PG  G  G PGKD
Sbjct: 588 GAPGEDGRPGPPGSIGIKGQPGTMGLPGPKGSNGDPGKPGEAGNPGVPGQRGAPGKD 644



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 96/232 (41%), Gaps = 66/232 (28%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP G   P G P
Sbjct: 531 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 590

Query: 155 GDEGKRGPKGD---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----- 200
           G++G+ GP G          MG PGP+G  GD GK G  G+ G PG+ G  G+DG     
Sbjct: 591 GEDGRPGPPGSIGIKGQPGTMGLPGPKGSNGDPGKPGEAGNPGVPGQRGAPGKDGKVGPY 650

Query: 201 -------LPGEPGLDGIPGRN--------------------------------------- 214
                  L GE G  G PG                                         
Sbjct: 651 GPPGPPGLRGERGEQGPPGPTGFQGHPGPPGPPGEGGKPGDQGVPGGPGAVGPLGPRGER 710

Query: 215 ---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G  G PG  GLPG+ G+ G +G +G KG  GP G  G +G  G+ G P 
Sbjct: 711 GNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPG 762



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 77/149 (51%), Gaps = 24/149 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G  G+PG  G  GP         +G+ G  G PG PG+ G  G  G  G  G  G  G+
Sbjct: 356 RGAHGMPGKPGPMGP---------LGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGE 406

Query: 229 DGIP------------GTNGTNGEKGMTG 245
            G P            GT+GT G KG TG
Sbjct: 407 TGPPGPVGSPGLPGAIGTDGTPGPKGPTG 435



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 79/160 (49%), Gaps = 18/160 (11%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGYPGPQGIP 175
           G++G  G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G  G PG +GI 
Sbjct: 708 GERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIA 767

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------DGIPGRNGMDGIPGKD 223
           G  G +G +G +G  G  G  G DG  G PG              G PG  G+ G PG  
Sbjct: 768 GTPGPKGDRGGIGEKGAEGTAGNDGAGGLPGPLGPPGPAGLLGEKGEPGPRGLVGPPGSR 827

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G PG     G NG  G  G  GP+G+ G+ G+ G PG P 
Sbjct: 828 GNPGSR---GENGPTGAVGFAGPQGSDGQPGVKGEPGEPG 864



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 51/90 (56%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G +G  G 
Sbjct: 1055 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGHLGRAGK 1114

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1115 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1144



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 83/203 (40%), Gaps = 54/203 (26%)

Query: 113 GLQGPIGQ------KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KR 160
           GL+GP G+      KGE G  G MG  G  G +G PG  G  GPQG PG  G      K 
Sbjct: 306 GLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKP 365

Query: 161 GPKGDMGYPGPQGIPGDE---------GKRGPKGDMGYPGRIGLD------------GRD 199
           GP G +G PG  G PG+          G RGP+G  G  G  G              G D
Sbjct: 366 GPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTD 425

Query: 200 GLPGEPGLDGIPGR---------------------NGMDGIPGKDGLPGKDGIPGTNGTN 238
           G PG  G  G PG                       G  G+PG  G  G+ G  G  G +
Sbjct: 426 GTPGPKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGNSGLPGDPGFKGEAGPKGEPGPH 485

Query: 239 GEKGMTGPRGNRGKSGINGVPGT 261
           G +G  GP G  GK G  G PGT
Sbjct: 486 GIQGPIGPPGEEGKRGPRGDPGT 508



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 272 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 332 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 392 TGARGPEGPQGQRG 405



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 823 PPGSRGNPGSRGENGPTGAVGFAGPQGSDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 882

Query: 171 PQ---GIPGDEGKR---GPKGDMGYPGRIG 194
           P    G+PG +G R   GP G  G+PG  G
Sbjct: 883 PHGPNGVPGLKGGRGTQGPPGATGFPGSAG 912



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAP---GVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G  GP G  G+ G KGE G  G++G+ G+P   G+ G PGP G  G  G +G +G  G P
Sbjct: 843 GFAGPQGSDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPP 902

Query: 170 GPQGIPGDEGK 180
           G  G PG  G+
Sbjct: 903 GATGFPGSAGR 913


>gi|313220533|emb|CBY31383.1| unnamed protein product [Oikopleura dioica]
          Length = 1423

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 86/167 (51%), Gaps = 15/167 (8%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM------------GVKGERGEKGAPGVVGP 147
           QG         PPG QG  G+ GE GA G++            G  GERG +G  G  GP
Sbjct: 601 QGATGIQGNNGPPGAQGDPGKPGEAGAPGDIGAPGAAGARGDRGHPGERGPQGLVGKAGP 660

Query: 148 PGPQGIPGDEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            G  GIPGD+GK+GP+GD G P   GPQGI G  G +GP+G+ G PG  G  G  G  G 
Sbjct: 661 RGVAGIPGDDGKKGPQGDRGAPGSSGPQGIQGPAGDKGPQGNQGPPGERGDTGVPGNEGP 720

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            G  GI G  G  G PG  G  G+ G PG  G  G +G  G  G+RG
Sbjct: 721 KGAQGIAGNTGQRGAPGSQGPQGEQGPPGAAGPTGPEGAPGASGDRG 767



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 97/201 (48%), Gaps = 30/201 (14%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QGF  ST      G +G  G +G +G  G  G +G+RGE G PG VGP GP G  G +G 
Sbjct: 397 QGFPGSTGMKGDQGPKGSSGDQGMMGMPGPSGERGKRGETGEPGAVGPQGPAGERGQQGS 456

Query: 160 RGPKGDMGYP------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP-------- 205
           RG  G MG P      G +G+ G+ G+ G  G+ G PG  G  G  G+ G P        
Sbjct: 457 RGFPGKMGNPGIKGNHGARGVAGERGQSGKTGEQGQPGPTGTPGSRGMSGRPGKMGPSGK 516

Query: 206 -------GLDGIP---------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                  GLDG P         G+ G  G+PG+ G+ G+DG PG  G+NGE G  G  G 
Sbjct: 517 PGPTGPTGLDGRPGPIGPAGPIGQMGQMGLPGEKGMAGEDGKPGLKGSNGEPGQMGATGK 576

Query: 250 RGKSGINGVPGTPAICAYKRE 270
            G SG  GV G   +   + E
Sbjct: 577 EGVSGPQGVRGPSGVPGERGE 597



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 90/181 (49%), Gaps = 30/181 (16%)

Query: 113 GLQGPIGQKGEIGAKG---------------EMGVKGERG------EKGAPGVVGPPGPQ 151
           G QGP G++G+ G++G                 GV GERG      E+G PG  G PG +
Sbjct: 443 GPQGPAGERGQQGSRGFPGKMGNPGIKGNHGARGVAGERGQSGKTGEQGQPGPTGTPGSR 502

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK------GDMGYPGRIGLDGRDGLPGEP 205
           G+ G  GK GP G  G  GP G+ G  G  GP       G MG PG  G+ G DG PG  
Sbjct: 503 GMSGRPGKMGPSGKPGPTGPTGLDGRPGPIGPAGPIGQMGQMGLPGEKGMAGEDGKPGLK 562

Query: 206 GLDGIPGR---NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           G +G PG+    G +G+ G  G+ G  G+PG  G  G +G TG +GN G  G  G PG P
Sbjct: 563 GSNGEPGQMGATGKEGVSGPQGVRGPSGVPGERGEEGPQGATGIQGNNGPPGAQGDPGKP 622

Query: 263 A 263
            
Sbjct: 623 G 623



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 83/168 (49%), Gaps = 27/168 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            G  GP+GQ G  GA G+ G KGERG  G   P G+ G  GP G PG +GK+GP+G  G  
Sbjct: 977  GPTGPMGQPGSPGATGKTGAKGERGNPGPNGPQGLQGNTGPSGPPGQQGKKGPEGPQGNI 1036

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G QG PG+EG RG  G  G  G IG  G  GL    GL G PGR G+ G PG  G  G+ 
Sbjct: 1037 GIQGPPGNEGARGSPGPQGLQGPIGKKGEQGL---QGLKGHPGRTGLTGPPGPTGKTGEA 1093

Query: 230  GIPGTNGTNGEK---------------------GMTGPRGNRGKSGIN 256
            G  G  G  G +                     GM G RG RG  G+N
Sbjct: 1094 GPQGQQGPTGSRGDVGPRGPVGPPGKDGNDGRPGMDGKRGERGDDGMN 1141



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 78/175 (44%), Gaps = 36/175 (20%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           Q+G  G  G  G  G +G  G PG  GPPGPQG  G  G  G  G  G PGP G   D+G
Sbjct: 270 QQGPRGMTGLQGEAGPKGNDGTPGRAGPPGPQGNKGPAGFNGATGAKGEPGPYG---DKG 326

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM----------------------- 216
            +GP+G  G  G+ G  G  G+PG PG+DG+PG  G                        
Sbjct: 327 SQGPQGPRGENGKTGPPGAAGIPGNPGIDGVPGAKGSTGNAGPVGSTGLPGPRGPPGPQG 386

Query: 217 ----------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                      G PG  G+ G  G  G++G  G  GM GP G RGK G  G PG 
Sbjct: 387 NMGVPGVKGNQGFPGSTGMKGDQGPKGSSGDQGMMGMPGPSGERGKRGETGEPGA 441



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 87/189 (46%), Gaps = 39/189 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------ 158
           P G  G  G KGE G  G+ G +G +G +G  G  GPPG  GIPG+ G            
Sbjct: 306 PAGFNGATGAKGEPGPYGDKGSQGPQGPRGENGKTGPPGAAGIPGNPGIDGVPGAKGSTG 365

Query: 159 KRGP------------------------KGDMGYPGPQGIPGDEGKRGPKGD---MGYPG 191
             GP                        KG+ G+PG  G+ GD+G +G  GD   MG PG
Sbjct: 366 NAGPVGSTGLPGPRGPPGPQGNMGVPGVKGNQGFPGSTGMKGDQGPKGSSGDQGMMGMPG 425

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G  G+ G  GEPG  G  G  G  G  G  G PGK G PG  G +G +G+ G RG  G
Sbjct: 426 PSGERGKRGETGEPGAVGPQGPAGERGQQGSRGFPGKMGNPGIKGNHGARGVAGERGQSG 485

Query: 252 KSGINGVPG 260
           K+G  G PG
Sbjct: 486 KTGEQGQPG 494



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 79/159 (49%), Gaps = 26/159 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG-P 183
           GA+G  G  G+ G+ GA G  GPPG  G+PG  G+ G  G  G  G  G+PG +G RG P
Sbjct: 161 GAQGNPGPSGQPGDAGAQGPQGPPGKTGMPGQNGRDGSTGPPGKLGQMGVPGGQGARGFP 220

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------------------- 223
               G PG  G  G  G PG+ G DG+PGRNG  G PG                      
Sbjct: 221 ----GTPGMPGAKGHTGHPGQDGKDGVPGRNGDVGSPGPAGDTGPPGIAGPPGQQGPRGM 276

Query: 224 -GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            GL G+ G  G +GT G  G  GP+GN+G +G NG  G 
Sbjct: 277 TGLQGEAGPKGNDGTPGRAGPPGPQGNKGPAGFNGATGA 315



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 84/167 (50%), Gaps = 27/167 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
           PGL+G  G+ G++GA G+ GV G +G +G         P G+PG+ G+ GP+G  G    
Sbjct: 559 PGLKGSNGEPGQMGATGKEGVSGPQGVRG---------PSGVPGERGEEGPQGATGIQGN 609

Query: 169 ---PGPQGIPGDEGKRGPKGDM------------GYPGRIGLDGRDGLPGEPGLDGIPGR 213
              PG QG PG  G+ G  GD+            G+PG  G  G  G  G  G+ GIPG 
Sbjct: 610 NGPPGAQGDPGKPGEAGAPGDIGAPGAAGARGDRGHPGERGPQGLVGKAGPRGVAGIPGD 669

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G  G  G  G PG  G  G  G  G+KG  G +G  G+ G  GVPG
Sbjct: 670 DGKKGPQGDRGAPGSSGPQGIQGPAGDKGPQGNQGPPGERGDTGVPG 716



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 79/152 (51%), Gaps = 12/152 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG++G  G  G  G KG+ G KG  G++G           G+PG  G+RG +G+ G PG 
Sbjct: 391 PGVKGNQGFPGSTGMKGDQGPKGSSGDQGM---------MGMPGPSGERGKRGETGEPGA 441

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G  G  G+RG +G  G+PG++G     G+ G  G  G+ G  G  G  G+ G PG  G 
Sbjct: 442 VGPQGPAGERGQQGSRGFPGKMG---NPGIKGNHGARGVAGERGQSGKTGEQGQPGPTGT 498

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG+ G +G  G  GP G  G +G  G+ G P 
Sbjct: 499 PGSRGMSGRPGKMGPSGKPGPTGPTGLDGRPG 530



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 105/259 (40%), Gaps = 72/259 (27%)

Query: 73  EKEQQNSTH-----NNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAK 127
           E+ QQ S        NP +  N  +R  +   +G    T E   PG  G  G +G  G  
Sbjct: 450 ERGQQGSRGFPGKMGNPGIKGNHGARG-VAGERGQSGKTGEQGQPGPTGTPGSRGMSGRP 508

Query: 128 GEMGVKGERGEKGA------PGVVGPPGP------------QGIPGDEGKRGPKGDMGYP 169
           G+MG  G+ G  G       PG +GP GP            +G+ G++GK G KG  G P
Sbjct: 509 GKMGPSGKPGPTGPTGLDGRPGPIGPAGPIGQMGQMGLPGEKGMAGEDGKPGLKGSNGEP 568

Query: 170 ------------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                             GP G+PG+ G+ GP+G  G  G  G  G  G PG+PG  G P
Sbjct: 569 GQMGATGKEGVSGPQGVRGPSGVPGERGEEGPQGATGIQGNNGPPGAQGDPGKPGEAGAP 628

Query: 212 GR------------------------------NGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G                                G+ GIPG DG  G  G  G  G++G +
Sbjct: 629 GDIGAPGAAGARGDRGHPGERGPQGLVGKAGPRGVAGIPGDDGKKGPQGDRGAPGSSGPQ 688

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G+ GP G++G  G  G PG
Sbjct: 689 GIQGPAGDKGPQGNQGPPG 707



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           MGV G +G +G PG  G      + GD+G +G  GD G     G+PG  G+RG +G+ G 
Sbjct: 388 MGVPGVKGNQGFPGSTG------MKGDQGPKGSSGDQGM---MGMPGPSGERGKRGETGE 438

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG +G  G  G  G+ G  G PG+ G  GI G  G  G  G  G +G  GE+G  GP G 
Sbjct: 439 PGAVGPQGPAGERGQQGSRGFPGKMGNPGIKGNHGARGVAGERGQSGKTGEQGQPGPTGT 498

Query: 250 RGKSGINGVPG 260
            G  G++G PG
Sbjct: 499 PGSRGMSGRPG 509



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 85/188 (45%), Gaps = 39/188 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK------GAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PG QGP GQ G  G  G+ G  G  G++      GAPG  G PGP G  G  G+ GP G 
Sbjct: 856  PGQQGPPGQDGAAGPNGQRGEPGPPGQQGLTGDIGAPGQNGEPGPAGQDGQTGEPGPSGP 915

Query: 166  ---MGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRD-------------------- 199
                G PG  G+PG  G +G KG+    G PG+IG  G++                    
Sbjct: 916  SGLAGNPGSTGLPGPAGIKGHKGNDGQQGEPGKIGSQGKEGPSGPQGPPGLPGQVGNVGD 975

Query: 200  -------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                   G PG PG  G  G  G  G PG +G  G  G  G +G  G++G  GP G +G 
Sbjct: 976  TGPTGPMGQPGSPGATGKTGAKGERGNPGPNGPQGLQGNTGPSGPPGQQGKKGPEGPQGN 1035

Query: 253  SGINGVPG 260
             GI G PG
Sbjct: 1036 IGIQGPPG 1043



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 89/203 (43%), Gaps = 54/203 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------PPGPQGIPGDEGK 159
           PG+ G  G  G  G  G+ GV G  G+ G+PG  G              GP+G+ G +G+
Sbjct: 223 PGMPGAKGHTGHPGQDGKDGVPGRNGDVGSPGPAGDTGPPGIAGPPGQQGPRGMTGLQGE 282

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPK---------------GDMGYPGRIGLDGRDGLPGE 204
            GPKG+ G PG  G PG +G +GP                GD G  G  G  G +G  G 
Sbjct: 283 AGPKGNDGTPGRAGPPGPQGNKGPAGFNGATGAKGEPGPYGDKGSQGPQGPRGENGKTGP 342

Query: 205 PGLDGIPGRNGMDGIPGKD---------------------------GLPGKDGIPGTNGT 237
           PG  GIPG  G+DG+PG                             G+PG  G  G  G+
Sbjct: 343 PGAAGIPGNPGIDGVPGAKGSTGNAGPVGSTGLPGPRGPPGPQGNMGVPGVKGNQGFPGS 402

Query: 238 NGEKGMTGPRGNRGKSGINGVPG 260
            G KG  GP+G+ G  G+ G+PG
Sbjct: 403 TGMKGDQGPKGSSGDQGMMGMPG 425



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 77/177 (43%), Gaps = 27/177 (15%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRG 161
            E  PPG QG  G  G  G  GE G  G+ G+ G PG  GP      PG  G+PG  G +G
Sbjct: 876  EPGPPGQQGLTGDIGAPGQNGEPGPAGQDGQTGEPGPSGPSGLAGNPGSTGLPGPAGIKG 935

Query: 162  PKGDMGYPGPQGIPGDEGKR---------------------GPKGDMGYPGRIGLDGRDG 200
             KG+ G  G  G  G +GK                      GP G MG PG  G  G+ G
Sbjct: 936  HKGNDGQQGEPGKIGSQGKEGPSGPQGPPGLPGQVGNVGDTGPTGPMGQPGSPGATGKTG 995

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GE G  G  G  G+ G  G  G PG+ G  G  G  G  G+ GP GN G  G  G
Sbjct: 996  AKGERGNPGPNGPQGLQGNTGPSGPPGQQGKKGPEGPQGNIGIQGPPGNEGARGSPG 1052



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 84/181 (46%), Gaps = 36/181 (19%)

Query: 113  GLQGPIGQKG---------------------------------EIGAKGEMGVKGERGEK 139
            GL GP G KG                                 ++G  G+ G  G  G+ 
Sbjct: 926  GLPGPAGIKGHKGNDGQQGEPGKIGSQGKEGPSGPQGPPGLPGQVGNVGDTGPTGPMGQP 985

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLD 196
            G+PG  G  G +G  G+ G  GP+G  G  GP G PG +GK+   GP+G++G  G  G +
Sbjct: 986  GSPGATGKTGAKGERGNPGPNGPQGLQGNTGPSGPPGQQGKKGPEGPQGNIGIQGPPGNE 1045

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G PG  GL G  G+ G  G+ G  G PG+ G+ G  G  G+ G  GP+G +G +G  
Sbjct: 1046 GARGSPGPQGLQGPIGKKGEQGLQGLKGHPGRTGLTGPPGPTGKTGEAGPQGQQGPTGSR 1105

Query: 257  G 257
            G
Sbjct: 1106 G 1106



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 91/223 (40%), Gaps = 66/223 (29%)

Query: 112 PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------- 161
           PG +GP G +G     G +G  G +G +GE+G PG  GP GP+G PG  G RG       
Sbjct: 715 PGNEGPKGAQGIAGNTGQRGAPGSQGPQGEQGPPGAAGPTGPEGAPGASGDRGDTGPPGP 774

Query: 162 --------------PKGDMGYPGPQGIPGDEGKR---------------GPKGDMGY--- 189
                          KGD G PG +G  G  G+                G KG  G+   
Sbjct: 775 PGQIGAPGIQGNQGKKGDSGIPGVKGATGSVGQMGAQGQPGPPGPNGVMGNKGSRGHKGP 834

Query: 190 ---------------------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                                PG+ G  G+DG  G  G  G PG  G  G+ G  G PG+
Sbjct: 835 PGPSGFPGSPGRPGPPGSSGNPGQQGPPGQDGAAGPNGQRGEPGPPGQQGLTGDIGAPGQ 894

Query: 229 DGIPG---TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           +G PG    +G  GE G +GP G  G  G  G+PG   I  +K
Sbjct: 895 NGEPGPAGQDGQTGEPGPSGPSGLAGNPGSTGLPGPAGIKGHK 937



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 51/103 (49%), Gaps = 4/103 (3%)

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG QG PG +G  GP G  G PG  G  G  G  G PG +G PG  G DG   + G PG 
Sbjct: 856 PGQQGPPGQDGAAGPNGQRGEPGPPGQQGLTGDIGAPGQNGEPGPAGQDG---QTGEPGP 912

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA-ICAYKRE 270
            G  G  G  G  G+ GP G +G  G +G  G P  I +  +E
Sbjct: 913 SGPSGLAGNPGSTGLPGPAGIKGHKGNDGQQGEPGKIGSQGKE 955


>gi|281339922|gb|EFB15506.1| hypothetical protein PANDA_003842 [Ailuropoda melanoleuca]
          Length = 2511

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 73/131 (55%), Gaps = 12/131 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G  G  G  G +G    +GE G PG VGPPG         KRG  G  G 
Sbjct: 2128 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQVGPPG---------KRGTAGGTGL 2178

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ GL GI G  G  G+ GK+G+ G 
Sbjct: 2179 PGSQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGLKGIQGPRGPPGLMGKEGIIGP 2238

Query: 229  DGIPGTNGTNG 239
             GI G +G  G
Sbjct: 2239 LGILGPSGRPG 2249



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 73/146 (50%), Gaps = 30/146 (20%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGK---------------------RGPKGDMGYPGP 171
            +G +G  G PG  G PGP G  GD+G                       GP+G  G PG 
Sbjct: 1431 RGSQGLPGFPGARGKPGPLGKVGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGA 1490

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            +G+PG  G+ GP+GD         +G  G PG PGL+G PGR G  G PG DG+ G+ G 
Sbjct: 1491 RGLPGPRGQLGPEGD---------EGHMGPPGAPGLEGQPGRKGFPGRPGPDGMKGEPGD 1541

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  G  GE+G+ G  G  G+ GI G
Sbjct: 1542 PGRPGPVGEQGLLGFIGLVGEPGIVG 1567



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 88/189 (46%), Gaps = 42/189 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG  GP G KG+ GA+G  G +G+ G +G  G +GPPG    PG EG+ G KG  G PG
Sbjct: 1475 PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGHMGPPG---APGLEGQPGRKGFPGRPG 1531

Query: 171  PQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------PGLDGIPG 212
            P G+   PGD G+ GP G+ G  G IGL G  G+ GE                G  G PG
Sbjct: 1532 PDGMKGEPGDPGRPGPVGEQGLLGFIGLVGEPGIVGEKGDRGMMGPPGAPGPKGSMGHPG 1591

Query: 213  RNG---------------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              G                     M G  G+ G  G DG  G  G+ G KG +GP+G  G
Sbjct: 1592 TPGAVGTPGEPGPPGPPGSRGPPGMRGAKGRWGPRGPDGPAGEQGSRGLKGPSGPQGRVG 1651

Query: 252  KSGINGVPG 260
            + G  G  G
Sbjct: 1652 QPGQQGAAG 1660



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 92/191 (48%), Gaps = 29/191 (15%)

Query: 85   WVWLNAYSRIPL--VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK--------- 133
            W    A S+ P     + GF         PG +G  G  G++G KG +G           
Sbjct: 1420 WEGFRAASKFPRGSQGLPGF---------PGARGKPGPLGKVGDKGSLGFPGPPGPEGFP 1470

Query: 134  ---GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
               G  G+ G  G+ G PG +G+PG  G+ GP+GD G+ GP G PG EG+ G K   G+P
Sbjct: 1471 GDIGPPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGHMGPPGAPGLEGQPGRK---GFP 1527

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            GR G DG  G PG+PG    PG  G  G+ G  GL G+ GI G  G  G  G  G  G +
Sbjct: 1528 GRPGPDGMKGEPGDPGR---PGPVGEQGLLGFIGLVGEPGIVGEKGDRGMMGPPGAPGPK 1584

Query: 251  GKSGINGVPGT 261
            G  G  G PG 
Sbjct: 1585 GSMGHPGTPGA 1595



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 81/186 (43%), Gaps = 36/186 (19%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             M+G   +     P G  GP G +G +G  G  G++G+ G KG PG  GP G +G PGD 
Sbjct: 1483 GMKGKPGARGLPGPRGQLGPEGDEGHMGPPGAPGLEGQPGRKGFPGRPGPDGMKGEPGDP 1542

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIG-------- 194
            G+ GP G+ G  G  G+ G+ G  G KGD               MG+PG  G        
Sbjct: 1543 GRPGPVGEQGLLGFIGLVGEPGIVGEKGDRGMMGPPGAPGPKGSMGHPGTPGAVGTPGEP 1602

Query: 195  -------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                         + G  G  G  G DG  G  G  G+ G  G  G+ G PG  G  GE+
Sbjct: 1603 GPPGPPGSRGPPGMRGAKGRWGPRGPDGPAGEQGSRGLKGPSGPQGRVGQPGQQGAAGER 1662

Query: 242  GMTGPR 247
            G +G R
Sbjct: 1663 GHSGVR 1668



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 80/165 (48%), Gaps = 26/165 (15%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRG----------PKG--DMGYPG----PQGIPG 176
            +G+RGE G PG  G  G QG+ GD G++G          P G  D+  PG    P+   G
Sbjct: 1994 RGDRGEPGDPGYPGQEGVQGLRGDPGQQGLPVSGAPVPSPSGPRDIRDPGGSRDPKDRKG 2053

Query: 177  DEGKRGPKGDMGYPGRIGLDGR-------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
               +R  K  +G+    G  G         GL G PG  G+ GR G +G+PG DG PG+D
Sbjct: 2054 KRDQRESKARLGHQDEGGFRGPHQLLLYPQGLQGLPGPRGVVGRQGPEGVPGPDGFPGRD 2113

Query: 230  GIPGTNGT---NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  G  G    +G+ G  GP G RG  G+ G+PG      +K ES
Sbjct: 2114 GQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGES 2158



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 75/163 (46%), Gaps = 28/163 (17%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ- 172
            LQG +G  G  G  G +G KG    KG PG  G PG QG PG EG  G K   GYPG Q 
Sbjct: 924  LQGDVGLPGLSGNPGPLGRKGY---KGYPGPAGHPGEQGQPGPEGSPGAK---GYPGRQV 977

Query: 173  ------------GIPGDEGKRGPKGDMGYPGRIG----LDGRDGLPG---EPG--LDGIP 211
                        G+PG  G  GPKG  G  GR G      G    P    EPG  L   P
Sbjct: 978  QYMASGSSVAMVGLPGPVGDPGPKGSRGLCGRGGGIVEATGPQQHPSERVEPGAPLASNP 1037

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              + +   PG  G  G  G+ G  G++GE+G+ G  G RGK G
Sbjct: 1038 AESFLPAGPGAPGYIGLPGLFGFPGSDGERGLPGVPGKRGKMG 1080



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 69/166 (41%), Gaps = 58/166 (34%)

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGR 192
            +G+ G PG+ G PGP G          KG  GYPGP G PG++G+ GP+G     GYPGR
Sbjct: 925  QGDVGLPGLSGNPGPLGR---------KGYKGYPGPAGHPGEQGQPGPEGSPGAKGYPGR 975

Query: 193  -------------IGLDGRDGLPGEPGLDGIPGRNG------------------------ 215
                         +GL G  G PG  G  G+ GR G                        
Sbjct: 976  QVQYMASGSSVAMVGLPGPVGDPGPKGSRGLCGRGGGIVEATGPQQHPSERVEPGAPLAS 1035

Query: 216  ---------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                       G PG  GLPG  G PG++G  G  G+ G RG  G+
Sbjct: 1036 NPAESFLPAGPGAPGYIGLPGLFGFPGSDGERGLPGVPGKRGKMGE 1081



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 85/189 (44%), Gaps = 38/189 (20%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G KG  G +G  G  GE+G +G   + GP GPQG  G  G++G  G+ G+ G +G PG  
Sbjct: 1618 GAKGRWGPRGPDGPAGEQGSRG---LKGPSGPQGRVGQPGQQGAAGERGHSGVRGFPGIP 1674

Query: 179  GKR---------------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G                             GPKGD+G  G  G  G  G  GEPGL+G  
Sbjct: 1675 GPSGPPGTKGLPGEPGPQGPQGPLGPPGEMGPKGDLGPLGTPGEQGLIGQRGEPGLEGDS 1734

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING----VPG-TPAICA 266
            G  G DG+ G  G PG D   G  G  G++G+ G  G  G  GI G    VPG  PA+ A
Sbjct: 1735 GPAGPDGLKGDRGDPGPD---GERGDKGQEGLMGEDGPPGPPGITGVRVSVPGFVPALGA 1791

Query: 267  YKRESCSLL 275
                 C  L
Sbjct: 1792 SGDAYCPRL 1800



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 53/125 (42%), Gaps = 36/125 (28%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGER---------------------------------- 136
            P G QG +GQ G+ GA GE G  G R                                  
Sbjct: 1643 PSGPQGRVGQPGQQGAAGERGHSGVRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPLGPPG 1702

Query: 137  --GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
              G KG  G +G PG QG+ G  G+ G +GD G  GP G+ GD G  GP G+ G  G+ G
Sbjct: 1703 EMGPKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDGERGDKGQEG 1762

Query: 195  LDGRD 199
            L G D
Sbjct: 1763 LMGED 1767



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G +GE G+KG+ G  GE G  G  G+ GP GP G  G +G +GP+      GP G+ G E
Sbjct: 2180 GSQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGLKGIQGPR------GPPGLMGKE 2233

Query: 179  GKRGPKGDMGYPGRIGLD 196
            G  GP G +G  GR GL 
Sbjct: 2234 GIIGPLGILGPSGRPGLQ 2251



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            RG +G  G+PG +G PG  GK G KG +G+PG  G +G  G  G PG +G     GM G 
Sbjct: 1431 RGSQGLPGFPGARGKPGPLGKVGDKGSLGFPGPPGPEGFPGDIGPPGDNGP---EGMKGK 1487

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  GLPG  G  G  G  G  G  G  G  G+ G  G PG P     K E
Sbjct: 1488 PGARGLPGPRGQLGPEGDEGHMGPPGAPGLEGQPGRKGFPGRPGPDGMKGE 1538



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 85/227 (37%), Gaps = 81/227 (35%)

Query: 112  PGLQGPIGQKGE---IGAKGEMGVKGERGE------------KGAPGVVGPPGP------ 150
            PG  GP+G++G    IG  GE G+ GE+G+            KG+ G  G PG       
Sbjct: 1542 PGRPGPVGEQGLLGFIGLVGEPGIVGEKGDRGMMGPPGAPGPKGSMGHPGTPGAVGTPGE 1601

Query: 151  ---------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                           +G  G  G RGP G  G  G +G+   +G  GP+G +G PG+ G 
Sbjct: 1602 PGPPGPPGSRGPPGMRGAKGRWGPRGPDGPAGEQGSRGL---KGPSGPQGRVGQPGQQGA 1658

Query: 196  DGRDGLP------------------------------------------GEPGLDGIPGR 213
             G  G                                            G+ G  G PG 
Sbjct: 1659 AGERGHSGVRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPLGPPGEMGPKGDLGPLGTPGE 1718

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G  G+ GL G  G  G +G  G++G  GP G RG  G  G+ G
Sbjct: 1719 QGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDGERGDKGQEGLMG 1765


>gi|359063347|ref|XP_002685685.2| PREDICTED: collagen alpha-4(IV) chain [Bos taurus]
          Length = 1635

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/177 (44%), Positives = 96/177 (54%), Gaps = 9/177 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
            PGLQGP G++G  G  G  G  G   E+GAPG+ G PG  G PG  G    +G +GDMG 
Sbjct: 852  PGLQGPKGREGNAGFPGIPGPPGHSCERGAPGIPGQPGLPGAPGSPGAPGWKGQRGDMGP 911

Query: 169  PGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GP   +G+PG  G  G  G  G PG  G  G DGLPG PG  G  G  G  G PG+ G 
Sbjct: 912  LGPAGMKGLPGVPGWPGADGTPGLPGVPGPTGDDGLPGLPGPKGPQGLPGFLGFPGERGK 971

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
            PG+DG PG  G +GEKG  G  G+RG  G+ G  G P    Y+ E+  +    ET +
Sbjct: 972  PGQDGHPGRKGEHGEKGWPGFLGDRGLKGVKGARGPP---GYEGETDIISKKGETGE 1025



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 84/170 (49%), Gaps = 21/170 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGY 168
            PG  G  G  G  G +G+MG  G  G KG PGV G PG  G PG  G  GP GD    G 
Sbjct: 891  PGAPGSPGAPGWKGQRGDMGPLGPAGMKGLPGVPGWPGADGTPGLPGVPGPTGDDGLPGL 950

Query: 169  PGP---QGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-- 220
            PGP   QG+P   G  G+RG  G  G+PGR G  G  G PG  G  G+ G  G  G P  
Sbjct: 951  PGPKGPQGLPGFLGFPGERGKPGQDGHPGRKGEHGEKGWPGFLGDRGLKGVKGARGPPGY 1010

Query: 221  ----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      G+ G PG  G  G  G NG+KG  G +G RG+ G +G PG
Sbjct: 1011 EGETDIISKKGETGEPGPSGDGGFPGENGDKGHPGMQGRRGEPGSHGPPG 1060



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 82/184 (44%), Gaps = 43/184 (23%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG----- 152
             + GF     E   PG  G  G+KGE G KG  G  G+RG KG  G  GPPG +G     
Sbjct: 958  GLPGFLGFPGERGKPGQDGHPGRKGEHGEKGWPGFLGDRGLKGVKGARGPPGYEGETDII 1017

Query: 153  -IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-GI 210
               G+ G+ GP GD G+PG              GD G+PG  G  G  G  G PG   G 
Sbjct: 1018 SKKGETGEPGPSGDGGFPGEN------------GDKGHPGMQGRRGEPGSHGPPGFHPGE 1065

Query: 211  PGRN---------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PGRN                     G  G PG  G PG  G PG +G +G +   GP+G+
Sbjct: 1066 PGRNGQPGLPGPPGPPGSPGLRGNIGFPGFPGDQGEPGSPGCPGPSGMDGTR---GPKGD 1122

Query: 250  RGKS 253
            +G+S
Sbjct: 1123 KGES 1126



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 75/197 (38%), Gaps = 54/197 (27%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE------ 178
           GA G   + G++G++G PG+   PGP G          +GD+G PG  G  G        
Sbjct: 744 GAPGLRCLDGQKGQRGKPGISERPGPPGF---------RGDIGEPGLGGEKGSSPVGPPG 794

Query: 179 --------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
                   G++GP GD             G PG PG  G+PG  G  G+ G  G PG  G
Sbjct: 795 TPGSPGVNGQKGPPGDPAI----------GYPGLPGKSGLPGAPGSKGLRGDAGRPGTAG 844

Query: 231 IPGTNGTNGEKGMTGPRGNR---------------------GKSGINGVPGTPAICAYKR 269
             G  G  G +G  G  GN                      G+ G+ G PG+P    +K 
Sbjct: 845 PAGMPGFPGLQGPKGREGNAGFPGIPGPPGHSCERGAPGIPGQPGLPGAPGSPGAPGWKG 904

Query: 270 ESCSLLPNSETSQLLIP 286
           +   + P        +P
Sbjct: 905 QRGDMGPLGPAGMKGLP 921


>gi|148536825|ref|NP_001836.2| collagen alpha-1(IV) chain preproprotein [Homo sapiens]
 gi|125987809|sp|P02462.3|CO4A1_HUMAN RecName: Full=Collagen alpha-1(IV) chain; Contains: RecName:
            Full=Arresten; Flags: Precursor
          Length = 1669

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 37/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            PG QG  G  G+ GAKGE        +G+ G RGEKG  G+ G       PG  G++G K
Sbjct: 1031 PGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAG------FPGSPGEKGEK 1084

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
            G +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIPG  G  G+PG  
Sbjct: 1085 GSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTP 1141

Query: 222  -------KDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRGKSGINGVPGTPA 263
                   + G PG DGIPG+ G  GE G+            G +G++G+ G  G+ G+P 
Sbjct: 1142 GPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPG 1201

Query: 264  ICAYKRE 270
            I   K E
Sbjct: 1202 IPGSKGE 1208



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 863  PGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPG---LPGE------KGDHGFPGS 913

Query: 172  QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
             G  GD G +G KGD+G PG+                        IG  G  G  G+PG 
Sbjct: 914  SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 973

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 974  PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 1023



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 82/153 (53%), Gaps = 29/153 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD   PG  G PG  
Sbjct: 948  GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD---PGISGTPGAP 1004

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GPKG +G     G+    GLPG PG  G+PG      IPG  G PG   +PG  G  
Sbjct: 1005 GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGSPG---LPGDKGAK 1046

Query: 239  GEKGMTGP--------RGNRGKSGINGVPGTPA 263
            GEKG  GP        RG +G  GI G PG+P 
Sbjct: 1047 GEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPG 1079



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 91/172 (52%), Gaps = 28/172 (16%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 960  GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 1019

Query: 167  ---------GYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                     G PGPQ   G+PGD+G +G KG  G PG IG+ G  G  G+ G+ G PG  
Sbjct: 1020 GTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSP 1078

Query: 215  GMD------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G        GIPG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG
Sbjct: 1079 GEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 1130



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 94/186 (50%), Gaps = 37/186 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVG-P--PGPQ-- 151
            PG  G  GQ G+ G KG+ G+ G  G  G                PG  G P  PGPQ  
Sbjct: 977  PGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGS 1036

Query: 152  -GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGE 204
             G+PGD+G +G KG  G PG  GIPG  G++G +G  G+PG  G  G        G+PG 
Sbjct: 1037 PGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGS 1095

Query: 205  PGLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGI 255
            PGL G PG  G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G 
Sbjct: 1096 PGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGS 1155

Query: 256  NGVPGT 261
            +G+PG+
Sbjct: 1156 DGIPGS 1161



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 86/176 (48%), Gaps = 25/176 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL  P G KG+ GA+G  G+ G+ G  G PG  G PG  G PG +G+ G  G  G PG 
Sbjct: 834  PGLDMP-GPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGS 892

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD------------- 217
             G  G  G  G KGD G+PG  G  G  GL G+ G  G+PG+ G MD             
Sbjct: 893  PGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGD 952

Query: 218  ----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                      G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 953  QGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 1008



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 75/143 (52%), Gaps = 16/143 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-------P--K 163
            G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG++G +G       P  K
Sbjct: 1073 GFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVK 1132

Query: 164  GDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+ G PG   P G     G++G  G  G PG  G  G  GLPG  G  G PG  G  G  
Sbjct: 1133 GEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPGR-GFPGFPGAKGDKGSK 1188

Query: 221  GKDGLPGKDGIPGTNGTNGEKGM 243
            G+ G PG  G PG  G+ GE+G 
Sbjct: 1189 GEVGFPGLAGSPGIPGSKGEQGF 1211



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 60/110 (54%), Gaps = 16/110 (14%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----DE 178
           EIG  G+ G KG+RG  G  GV G PGPQG PG          +G PG +G PG    D 
Sbjct: 487 EIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGL---------IGQPGAKGEPGEFYFDL 537

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             +G KGD G+PG+ G+ GR G    PG DG PG  G  G PG  GL G+
Sbjct: 538 RLKGDKGDPGFPGQPGMTGRAG---SPGRDGHPGLPGPKGSPGSVGLKGE 584



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 81/178 (45%), Gaps = 46/178 (25%)

Query: 111 PPGL--QGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQGIPGDEGKRGPK 163
           PPG+  Q  + +KG+   KGE G KGE G +G PGV      G PGP+G PG +G +G K
Sbjct: 239 PPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEK 298

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGEPGLDGIP 211
           G  G+PG  G PG  G++GP+G+ G              G +G  G  G PG PG  G P
Sbjct: 299 GSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEP 358

Query: 212 GRNGMD--------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           G  G                      G PG+ G  G  G PGT+       + GP G 
Sbjct: 359 GPKGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGTS-------LPGPSGR 409



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 72/149 (48%), Gaps = 33/149 (22%)

Query: 127 KGEMGV--KGERGEKGAPGVVGPPGPQGIPG--------DEGKRGPKGDMGYPGPQGIPG 176
           KG+MG+  +G +G+KG  GV GPPG   +PG        D   +G KG  G PG QG+PG
Sbjct: 217 KGQMGLSFQGPKGDKGDQGVSGPPG---VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPG 273

Query: 177 -----DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
                + GK GP+G  G  G  G  G  G PGEPG  G+ GR G  G  G+         
Sbjct: 274 VGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGI 333

Query: 224 -------GLPGKDGIPGTNGTNGEKGMTG 245
                  G  G+ G PGT G  GE G  G
Sbjct: 334 VIGTGPLGEKGERGYPGTPGPRGEPGPKG 362



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 85/203 (41%), Gaps = 66/203 (32%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP GQKGE G+    G     GE+GE G PG   P    G PG +G +G KG++G+
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSA---GEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGF 1193

Query: 169  P---GPQGIPGDEGKR-----------------------GPKGDM--------------- 187
            P   G  GIPG +G++                       GPKGD                
Sbjct: 1194 PGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPM 1253

Query: 188  ---------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                           G PG  G  G  G  G+PG  G+PG  G  GI G  G  G  G+P
Sbjct: 1254 GPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVP 1313

Query: 233  GTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G  G+ G +G++G  G+
Sbjct: 1314 GFQGPKGLPGLQGIKGDQGDQGV 1336



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 58/136 (42%), Gaps = 43/136 (31%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 644 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 703

Query: 184 KGDM------------GYPGR-----------IGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GDM            G PG            +GL G  GLPG PG+ G PG  G  G+P
Sbjct: 704 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVP 763

Query: 221 GKDGLPGKDGIPGTNG 236
           G  G  G  G PG  G
Sbjct: 764 GVPGEHGAIGPPGLQG 779



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 79/185 (42%), Gaps = 43/185 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
           GL G  G  G  G KG +GV G  GE GA   +GPPG QGI G+ G              
Sbjct: 743 GLPGLPGIPGTPGEKGSIGVPGVPGEHGA---IGPPGLQGIRGEPGPPGLPGSVGSPGVP 799

Query: 160 -------------------------RGPKGDMGYPG--PQGIPGDEGKRGPKGDMGYPGR 192
                                    +G KG  G+PG    G  GD+G +G  G  G  G 
Sbjct: 800 GIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGL 859

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            GL G+ G PG PG  G  G  G+ G PG+ G PG  G PG  G  G+ G  G  G RG 
Sbjct: 860 PGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGD 919

Query: 253 SGING 257
            G+ G
Sbjct: 920 PGLKG 924



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--GIPGRN 214
           +G +G KGD G  GP G+PG + +   KGD    G  G  G  G  G PG+   G PG+ 
Sbjct: 225 QGPKGDKGDQGVSGPPGVPG-QAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKP 283

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G PGKDG  G+ G PG  G  G  G+ G +G +G+ G
Sbjct: 284 GPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKG 323


>gi|153217501|gb|AAI51221.1| COL4A1 protein [Homo sapiens]
          Length = 1669

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 37/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            PG QG  G  G+ GAKGE        +G+ G RGEKG  G+ G       PG  G++G K
Sbjct: 1031 PGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAG------FPGSPGEKGEK 1084

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
            G +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIPG  G  G+PG  
Sbjct: 1085 GSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTP 1141

Query: 222  -------KDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRGKSGINGVPGTPA 263
                   + G PG DGIPG+ G  GE G+            G +G++G+ G  G+ G+P 
Sbjct: 1142 GPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPG 1201

Query: 264  ICAYKRE 270
            I   K E
Sbjct: 1202 IPGSKGE 1208



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 863  PGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPG---LPGE------KGDHGFPGS 913

Query: 172  QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
             G  GD G +G KGD+G PG+                        IG  G  G  G+PG 
Sbjct: 914  SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 973

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 974  PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 1023



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 82/153 (53%), Gaps = 29/153 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD   PG  G PG  
Sbjct: 948  GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD---PGISGTPGAP 1004

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GPKG +G     G+    GLPG PG  G+PG      IPG  G PG   +PG  G  
Sbjct: 1005 GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGSPG---LPGDKGAK 1046

Query: 239  GEKGMTGP--------RGNRGKSGINGVPGTPA 263
            GEKG  GP        RG +G  GI G PG+P 
Sbjct: 1047 GEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPG 1079



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 91/172 (52%), Gaps = 28/172 (16%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 960  GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 1019

Query: 167  ---------GYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                     G PGPQ   G+PGD+G +G KG  G PG IG+ G  G  G+ G+ G PG  
Sbjct: 1020 GTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSP 1078

Query: 215  GMD------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G        GIPG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG
Sbjct: 1079 GEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 1130



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 94/186 (50%), Gaps = 37/186 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVG-P--PGPQ-- 151
            PG  G  GQ G+ G KG+ G+ G  G  G                PG  G P  PGPQ  
Sbjct: 977  PGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGS 1036

Query: 152  -GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGE 204
             G+PGD+G +G KG  G PG  GIPG  G++G +G  G+PG  G  G        G+PG 
Sbjct: 1037 PGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGS 1095

Query: 205  PGLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGI 255
            PGL G PG  G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G 
Sbjct: 1096 PGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGS 1155

Query: 256  NGVPGT 261
            +G+PG+
Sbjct: 1156 DGIPGS 1161



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 86/176 (48%), Gaps = 25/176 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL  P G KG+ GA+G  G+ G+ G  G PG  G PG  G PG +G+ G  G  G PG 
Sbjct: 834  PGLDMP-GPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGS 892

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD------------- 217
             G  G  G  G KGD G+PG  G  G  GL G+ G  G+PG+ G MD             
Sbjct: 893  PGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGD 952

Query: 218  ----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                      G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 953  QGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 1008



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 75/143 (52%), Gaps = 16/143 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-------P--K 163
            G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG++G +G       P  K
Sbjct: 1073 GFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVK 1132

Query: 164  GDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+ G PG   P G     G++G  G  G PG  G  G  GLPG  G  G PG  G  G  
Sbjct: 1133 GEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPGR-GFPGFPGAKGDKGSK 1188

Query: 221  GKDGLPGKDGIPGTNGTNGEKGM 243
            G+ G PG  G PG  G+ GE+G 
Sbjct: 1189 GEVGFPGLAGSPGIPGSKGEQGF 1211



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 81/178 (45%), Gaps = 46/178 (25%)

Query: 111 PPGL--QGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQGIPGDEGKRGPK 163
           PPG+  Q  + +KG+   KGE G KGE G +G PGV      G PGP+G PG +G +G K
Sbjct: 239 PPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEK 298

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGEPGLDGIP 211
           G  G+PG  G PG  G++GP+G+ G              G +G  G  G PG PG  G P
Sbjct: 299 GSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEP 358

Query: 212 GRNGMD--------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           G  G                      G PG+ G  G  G PGT+       + GP G 
Sbjct: 359 GPKGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGTS-------LPGPSGR 409



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 61/123 (49%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----DE 178
           EIG  G+ G KG+RG  G  GV G PGPQG PG          +G PG +G PG    D 
Sbjct: 487 EIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGL---------IGQPGAKGEPGEFYFDL 537

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
             +G KGD G+PG+                G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 538 RLKGDKGDPGFPGQ---------------PGMPGRAGSPGRDGHPGLPGPKGSPGSVGLK 582

Query: 239 GEK 241
           GE+
Sbjct: 583 GER 585



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 72/149 (48%), Gaps = 33/149 (22%)

Query: 127 KGEMGV--KGERGEKGAPGVVGPPGPQGIPG--------DEGKRGPKGDMGYPGPQGIPG 176
           KG+MG+  +G +G+KG  GV GPPG   +PG        D   +G KG  G PG QG+PG
Sbjct: 217 KGQMGLSFQGPKGDKGDQGVSGPPG---VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPG 273

Query: 177 -----DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
                + GK GP+G  G  G  G  G  G PGEPG  G+ GR G  G  G+         
Sbjct: 274 VGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGI 333

Query: 224 -------GLPGKDGIPGTNGTNGEKGMTG 245
                  G  G+ G PGT G  GE G  G
Sbjct: 334 VIGTGPLGEKGERGYPGTPGPRGEPGPKG 362



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 85/203 (41%), Gaps = 66/203 (32%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP GQKGE G+    G     GE+GE G PG   P    G PG +G +G KG++G+
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSA---GEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGF 1193

Query: 169  P---GPQGIPGDEGKR-----------------------GPKGDM--------------- 187
            P   G  GIPG +G++                       GPKGD                
Sbjct: 1194 PGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPM 1253

Query: 188  ---------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                           G PG  G  G  G  G+PG  G+PG  G  GI G  G  G  G+P
Sbjct: 1254 GPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVP 1313

Query: 233  GTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G  G+ G +G++G  G+
Sbjct: 1314 GFQGPKGLPGLQGIKGDQGDHGV 1336



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 58/136 (42%), Gaps = 43/136 (31%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 644 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 703

Query: 184 KGDM------------GYPGR-----------IGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GDM            G PG            +GL G  GLPG PG+ G PG  G  G+P
Sbjct: 704 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVP 763

Query: 221 GKDGLPGKDGIPGTNG 236
           G  G  G  G PG  G
Sbjct: 764 GVPGEHGAIGPPGLQG 779



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 79/185 (42%), Gaps = 43/185 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
           GL G  G  G  G KG +GV G  GE GA   +GPPG QGI G+ G              
Sbjct: 743 GLPGLPGIPGTPGEKGSIGVPGVPGEHGA---IGPPGLQGIRGEPGPPGLPGSVGSPGVP 799

Query: 160 -------------------------RGPKGDMGYPG--PQGIPGDEGKRGPKGDMGYPGR 192
                                    +G KG  G+PG    G  GD+G +G  G  G  G 
Sbjct: 800 GIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGL 859

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            GL G+ G PG PG  G  G  G+ G PG+ G PG  G PG  G  G+ G  G  G RG 
Sbjct: 860 PGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGD 919

Query: 253 SGING 257
            G+ G
Sbjct: 920 PGLKG 924



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--GIPGRN 214
           +G +G KGD G  GP G+PG + +   KGD    G  G  G  G  G PG+   G PG+ 
Sbjct: 225 QGPKGDKGDQGVSGPPGVPG-QAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKP 283

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G PGKDG  G+ G PG  G  G  G+ G +G +G+ G
Sbjct: 284 GPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKG 323


>gi|180803|gb|AAA53098.1| alpha-1 type IV collagen [Homo sapiens]
 gi|119629514|gb|EAX09109.1| collagen, type IV, alpha 1, isoform CRA_b [Homo sapiens]
          Length = 1669

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 37/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            PG QG  G  G+ GAKGE        +G+ G RGEKG  G+ G       PG  G++G K
Sbjct: 1031 PGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAG------FPGSPGEKGEK 1084

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
            G +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIPG  G  G+PG  
Sbjct: 1085 GSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTP 1141

Query: 222  -------KDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRGKSGINGVPGTPA 263
                   + G PG DGIPG+ G  GE G+            G +G++G+ G  G+ G+P 
Sbjct: 1142 GPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPG 1201

Query: 264  ICAYKRE 270
            I   K E
Sbjct: 1202 IPGSKGE 1208



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 863  PGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPG---LPGE------KGDHGFPGS 913

Query: 172  QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
             G  GD G +G KGD+G PG+                        IG  G  G  G+PG 
Sbjct: 914  SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 973

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 974  PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 1023



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 82/153 (53%), Gaps = 29/153 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD   PG  G PG  
Sbjct: 948  GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD---PGISGTPGAP 1004

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GPKG +G     G+    GLPG PG  G+PG      IPG  G PG   +PG  G  
Sbjct: 1005 GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGSPG---LPGDKGAK 1046

Query: 239  GEKGMTGP--------RGNRGKSGINGVPGTPA 263
            GEKG  GP        RG +G  GI G PG+P 
Sbjct: 1047 GEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPG 1079



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 91/172 (52%), Gaps = 28/172 (16%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 960  GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 1019

Query: 167  ---------GYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                     G PGPQ   G+PGD+G +G KG  G PG IG+ G  G  G+ G+ G PG  
Sbjct: 1020 GTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSP 1078

Query: 215  GMD------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G        GIPG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG
Sbjct: 1079 GEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 1130



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 94/186 (50%), Gaps = 37/186 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVG-P--PGPQ-- 151
            PG  G  GQ G+ G KG+ G+ G  G  G                PG  G P  PGPQ  
Sbjct: 977  PGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGS 1036

Query: 152  -GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGE 204
             G+PGD+G +G KG  G PG  GIPG  G++G +G  G+PG  G  G        G+PG 
Sbjct: 1037 PGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGS 1095

Query: 205  PGLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGI 255
            PGL G PG  G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G 
Sbjct: 1096 PGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGS 1155

Query: 256  NGVPGT 261
            +G+PG+
Sbjct: 1156 DGIPGS 1161



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 86/176 (48%), Gaps = 25/176 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL  P G KG+ GA+G  G+ G+ G  G PG  G PG  G PG +G+ G  G  G PG 
Sbjct: 834  PGLDMP-GPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGS 892

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD------------- 217
             G  G  G  G KGD G+PG  G  G  GL G+ G  G+PG+ G MD             
Sbjct: 893  PGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGD 952

Query: 218  ----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                      G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 953  QGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 1008



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 75/143 (52%), Gaps = 16/143 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-------P--K 163
            G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG++G +G       P  K
Sbjct: 1073 GFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVK 1132

Query: 164  GDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+ G PG   P G     G++G  G  G PG  G  G  GLPG  G  G PG  G  G  
Sbjct: 1133 GEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPGR-GFPGFPGAKGDKGSK 1188

Query: 221  GKDGLPGKDGIPGTNGTNGEKGM 243
            G+ G PG  G PG  G+ GE+G 
Sbjct: 1189 GEVGFPGLAGSPGIPGSKGEQGF 1211



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 81/178 (45%), Gaps = 46/178 (25%)

Query: 111 PPGL--QGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQGIPGDEGKRGPK 163
           PPG+  Q  + +KG+   KGE G KGE G +G PGV      G PGP+G PG +G +G K
Sbjct: 239 PPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEK 298

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGEPGLDGIP 211
           G  G+PG  G PG  G++GP+G+ G              G +G  G  G PG PG  G P
Sbjct: 299 GSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEP 358

Query: 212 GRNGMD--------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           G  G                      G PG+ G  G  G PGT+       + GP G 
Sbjct: 359 GPKGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGTS-------LPGPSGR 409



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 61/123 (49%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----DE 178
           EIG  G+ G KG+RG  G  GV G PGPQG PG          +G PG +G PG    D 
Sbjct: 487 EIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGL---------IGQPGAKGEPGEFYFDL 537

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
             +G KGD G+PG+                G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 538 RLKGDKGDPGFPGQ---------------PGMPGRAGSPGRDGHPGLPGPKGSPGSVGLK 582

Query: 239 GEK 241
           GE+
Sbjct: 583 GER 585



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 72/149 (48%), Gaps = 33/149 (22%)

Query: 127 KGEMGV--KGERGEKGAPGVVGPPGPQGIPG--------DEGKRGPKGDMGYPGPQGIPG 176
           KG+MG+  +G +G+KG  GV GPPG   +PG        D   +G KG  G PG QG+PG
Sbjct: 217 KGQMGLSFQGPKGDKGDQGVSGPPG---VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPG 273

Query: 177 -----DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
                + GK GP+G  G  G  G  G  G PGEPG  G+ GR G  G  G+         
Sbjct: 274 VGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGI 333

Query: 224 -------GLPGKDGIPGTNGTNGEKGMTG 245
                  G  G+ G PGT G  GE G  G
Sbjct: 334 VIGTGPLGEKGERGYPGTPGPRGEPGPKG 362



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 85/203 (41%), Gaps = 66/203 (32%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP GQKGE G+    G     GE+GE G PG   P    G PG +G +G KG++G+
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSA---GEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGF 1193

Query: 169  P---GPQGIPGDEGKR-----------------------GPKGDM--------------- 187
            P   G  GIPG +G++                       GPKGD                
Sbjct: 1194 PGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPM 1253

Query: 188  ---------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                           G PG  G  G  G  G+PG  G+PG  G  GI G  G  G  G+P
Sbjct: 1254 GPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVP 1313

Query: 233  GTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G  G+ G +G++G  G+
Sbjct: 1314 GFQGPKGLPGLQGIKGDQGDQGV 1336



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 58/136 (42%), Gaps = 43/136 (31%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 644 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 703

Query: 184 KGDM------------GYPGR-----------IGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GDM            G PG            +GL G  GLPG PG+ G PG  G  G+P
Sbjct: 704 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVP 763

Query: 221 GKDGLPGKDGIPGTNG 236
           G  G  G  G PG  G
Sbjct: 764 GVPGEHGAIGPPGLQG 779



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 79/185 (42%), Gaps = 43/185 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
           GL G  G  G  G KG +GV G  GE GA   +GPPG QGI G+ G              
Sbjct: 743 GLPGLPGIPGTPGEKGSIGVPGVPGEHGA---IGPPGLQGIRGEPGPPGLPGSVGSPGVP 799

Query: 160 -------------------------RGPKGDMGYPG--PQGIPGDEGKRGPKGDMGYPGR 192
                                    +G KG  G+PG    G  GD+G +G  G  G  G 
Sbjct: 800 GIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGL 859

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            GL G+ G PG PG  G  G  G+ G PG+ G PG  G PG  G  G+ G  G  G RG 
Sbjct: 860 PGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGD 919

Query: 253 SGING 257
            G+ G
Sbjct: 920 PGLKG 924



 Score = 40.4 bits (93), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--GIPGRN 214
           +G +G KGD G  GP G+PG + +   KGD    G  G  G  G  G PG+   G PG+ 
Sbjct: 225 QGPKGDKGDQGVSGPPGVPG-QAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKP 283

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G PGKDG  G+ G PG  G  G  G+ G +G +G+ G
Sbjct: 284 GPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKG 323


>gi|109071664|ref|XP_001111519.1| PREDICTED: collagen alpha-1(IX) chain-like isoform 1 [Macaca
           mulatta]
 gi|387539548|gb|AFJ70401.1| collagen alpha-1(IX) chain isoform 2 precursor [Macaca mulatta]
          Length = 678

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/195 (43%), Positives = 108/195 (55%), Gaps = 36/195 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKG---------ERGEKG 140
           L  M+G   +  E   PG QG  G++G      E+GA+G  G +G         ++GEKG
Sbjct: 182 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 241

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+RGP G+ G   P+G  G +G RG      PKGD G PG
Sbjct: 242 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAG---PKGERGAQGARGIPGLPGPKGDTGLPG 298

Query: 192 RIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              +DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  G
Sbjct: 299 ---VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 246 PRGNRGKSGINGVPG 260
           P GN GK G  G PG
Sbjct: 356 PMGNSGKPGQQGPPG 370



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 99/174 (56%), Gaps = 21/174 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 183 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 242

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQG+PG   D+G+RGP G+ G  G  G  G  G+PG      +PG  G  G+
Sbjct: 243 RGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPG------LPGPKGDTGL 296

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG DG   +DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  S
Sbjct: 297 PGVDG---RDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGS 347



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 234

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G RG  G  G+PG P 
Sbjct: 235 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPG 289



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PGP G  G  G++GP G++G  GP+
Sbjct: 325 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGPMGNSGKPGQQGPPGEVGPRGPR 378

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PG+
Sbjct: 379 GLPGSRGELGPVGSPGLPGK 398



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G+   MG  G+ G++G PG VGP GP+G+PG  G+ GP G  G 
Sbjct: 336 PGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGL 395

Query: 169 PG 170
           PG
Sbjct: 396 PG 397



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 39/146 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE------------------- 138
            + G      +  PPG  GP G++G  GA+G  G+ G +G+                   
Sbjct: 253 GLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 312

Query: 139 --------------KGAPGVVGPPGPQGIPGDEG------KRGPKGDMGYPGPQGIPGDE 178
                         +G PGV G PG +G+ G++G      K GP G+ G PG QG PG+ 
Sbjct: 313 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEV 372

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGE 204
           G RGP+G  G  G +G  G  GLPG+
Sbjct: 373 GPRGPRGLPGSRGELGPVGSPGLPGK 398


>gi|431838732|gb|ELK00662.1| Collagen alpha-1(X) chain [Pteropus alecto]
          Length = 680

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 83/154 (53%), Gaps = 17/154 (11%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-----IPGDEGKRGPKGDMGYP--- 169
           IG+ G  GA G+ G+ G +G  GAPG+ GPPG  G     +PG +G+RGP G  G P   
Sbjct: 263 IGKPGAAGAPGQPGIPGTKGHPGAPGIAGPPGAPGFGKPGLPGLKGQRGPVGLPGSPGAK 322

Query: 170 ---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------GLDGIPGRNGMDGIP 220
              GP G PG+ G  GP G+MG  G  G+ G  G+PG        G  G+PG  G  G  
Sbjct: 323 GEQGPAGHPGEPGLTGPPGNMGPQGPKGIPGNHGIPGPKGETGPFGPAGLPGAKGERGAS 382

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G DG PG  G PG +G  G  G+ GP+G+ G  G
Sbjct: 383 GLDGKPGYPGEPGLSGPKGNPGLPGPKGDPGVEG 416



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 86/171 (50%), Gaps = 28/171 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+ GP G  G  G  G  G+KG+RG     G+PG  G  GP G PG+ G  GP G+MG 
Sbjct: 287 PGIAGPPGAPG-FGKPGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPGEPGLTGPPGNMGP 345

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            GP+GIPG+ G  GPKG+ G  G  GL G  G  G  GLDG P      G PG+ GL G 
Sbjct: 346 QGPKGIPGNHGIPGPKGETGPFGPAGLPGAKGERGASGLDGKP------GYPGEPGLSGP 399

Query: 229 DGIPGTNGTNGEKGMTGPR------------------GNRGKSGINGVPGT 261
            G PG  G  G+ G+ GPR                  G  G  G  G+PGT
Sbjct: 400 KGNPGLPGPKGDPGVEGPRGLPGPAGAAGAKGMPGHNGETGPRGAPGIPGT 450



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 90/211 (42%), Gaps = 53/211 (25%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG--IPGDEGKRGP-------------- 162
           GQ+G  GA G  G  GE+G  G PG+ G  G  G   PG  G+RG               
Sbjct: 159 GQQGSPGAPGPRGFPGEKGAPGVPGINGQKGETGYGAPGRPGERGLPGPQGPMGPPGPPG 218

Query: 163 ---KGDMGYPGPQGIPGDEGKRGPK-----------------------GDMGYPGRIGLD 196
              +G+ G+PG  GI GD G  G +                       G  G PG+ G+ 
Sbjct: 219 MGKRGENGFPGQPGIKGDRGFPGERGSIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIP 278

Query: 197 GRDGLPGEPGLDGIPGRNGMD--GIPGKDGLPGKDGIPGTNGTNGEKG---------MTG 245
           G  G PG PG+ G PG  G    G+PG  G  G  G+PG+ G  GE+G         +TG
Sbjct: 279 GTKGHPGAPGIAGPPGAPGFGKPGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPGEPGLTG 338

Query: 246 PRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           P GN G  G  G+PG   I   K E+    P
Sbjct: 339 PPGNMGPQGPKGIPGNHGIPGPKGETGPFGP 369



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 59/155 (38%), Gaps = 54/155 (34%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY--PGRIG--------------- 194
           G PG +G  G  G  G+PG +G PG  G  G KG+ GY  PGR G               
Sbjct: 156 GKPGQQGSPGAPGPRGFPGEKGAPGVPGINGQKGETGYGAPGRPGERGLPGPQGPMGPPG 215

Query: 195 -----LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-------------------- 229
                  G +G PG+PG+ G              G PG+                     
Sbjct: 216 PPGMGKRGENGFPGQPGIKG------------DRGFPGERGSIGPPGPQGPPGERGPEGI 263

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG  G  G+ G+ G +G+ G  GI G PG P  
Sbjct: 264 GKPGAAGAPGQPGIPGTKGHPGAPGIAGPPGAPGF 298


>gi|405978682|gb|EKC43052.1| Collagen alpha-1(IV) chain [Crassostrea gigas]
          Length = 1598

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 92/191 (48%), Gaps = 15/191 (7%)

Query: 88  LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG- 146
           +    R      +G    + EY  PG  G  G+KG IG +G  G+KG RG  G PG VG 
Sbjct: 695 IGRVGRPGFSGPKGIRGDSGEYGSPGFPGLKGEKGIIGFRGFPGLKGFRGRDGIPGEVGL 754

Query: 147 -----PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP---------GR 192
                 PG  G+PG +G +G +G  G PG  G PG EG  G  G  G P         G 
Sbjct: 755 TGAPGDPGLPGLPGQDGLKGQRGLDGAPGLDGTPGREGPAGEPGLSGLPGYDGLPGMKGA 814

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  GR G PG PG  G+PG  G  G  G  G PG  G+PG  G  GE G  GP G+ G+
Sbjct: 815 TGFQGRSGEPGLPGQSGVPGVKGSRGESGLPGFPGSFGLPGLKGEPGEVGFPGPEGDIGQ 874

Query: 253 SGINGVPGTPA 263
            G+ G+ G P 
Sbjct: 875 PGLPGLQGLPG 885



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/196 (40%), Positives = 101/196 (51%), Gaps = 21/196 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
           PGL G  G  GEIG  G  G  G +G +G  G  G PG  G+ G++G    RG  G  G+
Sbjct: 683 PGLNGERGYPGEIGRVGRPGFSGPKGIRGDSGEYGSPGFPGLKGEKGIIGFRGFPGLKGF 742

Query: 169 PGPQGIPGDEGKRGPKGDMGYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  GIPG+ G  G  GD G PG   + GL G+ GL G PGLDG PGR G  G PG  GL
Sbjct: 743 RGRDGIPGEVGLTGAPGDPGLPGLPGQDGLKGQRGLDGAPGLDGTPGREGPAGEPGLSGL 802

Query: 226 PGKDGIPGTNGTN------------GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG DG+PG  G              G+ G+ G +G+RG+SG+ G PG+  +   K E   
Sbjct: 803 PGYDGLPGMKGATGFQGRSGEPGLPGQSGVPGVKGSRGESGLPGFPGSFGLPGLKGEPGE 862

Query: 274 L---LPNSETSQLLIP 286
           +    P  +  Q  +P
Sbjct: 863 VGFPGPEGDIGQPGLP 878



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 87/154 (56%), Gaps = 9/154 (5%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KGE G  G  G+ GERG  G  G VG PG     G +G RG  G+ G PG    PG +G+
Sbjct: 674 KGEPGDPGLPGLNGERGYPGEIGRVGRPG---FSGPKGIRGDSGEYGSPG---FPGLKGE 727

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---DGIPGTNGT 237
           +G  G  G+PG  G  GRDG+PGE GL G PG  G+ G+PG+DGL G+   DG PG +GT
Sbjct: 728 KGIIGFRGFPGLKGFRGRDGIPGEVGLTGAPGDPGLPGLPGQDGLKGQRGLDGAPGLDGT 787

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G +G  G  G  G  G +G+PG      ++  S
Sbjct: 788 PGREGPAGEPGLSGLPGYDGLPGMKGATGFQGRS 821



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 86/158 (54%), Gaps = 7/158 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
           PG  G  GQ+G  GA G  G  G  G  G PG+ G PG  G+PG +G    +G  G+ G 
Sbjct: 767 PGQDGLKGQRGLDGAPGLDGTPGREGPAGEPGLSGLPGYDGLPGMKGATGFQGRSGEPGL 826

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG  G+PG +G RG  G  G+PG  GL G  G PGE G  G  G  G  G+PG  GLPG 
Sbjct: 827 PGQSGVPGVKGSRGESGLPGFPGSFGLPGLKGEPGEVGFPGPEGDIGQPGLPGLQGLPGD 886

Query: 229 DGIPGTNGT---NGEKGMTGPRGNRGKSGINGVPGTPA 263
           +GIPG  G     G+ G  G +G RG+ G N +PG P 
Sbjct: 887 NGIPGEVGVVGRPGQDGFPGRKGERGEVG-NSIPGEPG 923



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/160 (45%), Positives = 87/160 (54%), Gaps = 16/160 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-VGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PG+ G  G+ G  G KGE G  G +G  G PG  VG  G  G PGD+G        GYPG
Sbjct: 964  PGIPGEQGRSGLPGFKGENGEPGRQGLDGFPGERVGADGFPGAPGDQGA------FGYPG 1017

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---DGIPGKDGLPG 227
             +G+ G  G+   +G  G PGR G DG  G PG+PG DG+PG  GM   DG+PG +GL G
Sbjct: 1018 ERGVVGAPGE---QGFDGTPGRSGPDGLKGFPGDPGQDGLPGFPGMLGEDGLPGFEGLKG 1074

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             DGIPG  G  G  G    +G +G  G  G PG P   A+
Sbjct: 1075 DDGIPGEEGRAGRPGR---KGEQGDFGFVGRPGPPGDDAF 1111



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/181 (41%), Positives = 93/181 (51%), Gaps = 32/181 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G  G  G KG  G +G  GE G PG  G PG +G  G+ G  G  G  G PG 
Sbjct: 797 PGLSGLPGYDGLPGMKGATGFQGRSGEPGLPGQSGVPGVKGSRGESGLPGFPGSFGLPGL 856

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDG---RDGLPGE------PGLDGIPGRNG------- 215
           +G PG+ G  GP+GD+G PG  GL G    +G+PGE      PG DG PGR G       
Sbjct: 857 KGEPGEVGFPGPEGDIGQPGLPGLQGLPGDNGIPGEVGVVGRPGQDGFPGRKGERGEVGN 916

Query: 216 -MDGIPGKDGLPGKDGIPGTNG---------------TNGEKGMTGPRGNRGKSGINGVP 259
            + G PG++G PG DG PG NG                +GE+G+ G  G  G+ G +G+P
Sbjct: 917 SIPGEPGRNGRPGGDGFPGLNGLKGEKGGPGLGGIPGNDGERGVIGLPGIPGEQGRSGLP 976

Query: 260 G 260
           G
Sbjct: 977 G 977



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 91/180 (50%), Gaps = 32/180 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM--- 166
           G QG  G+ G  G  G  GVKG RGE G PG  G    PG +G PG+ G  GP+GD+   
Sbjct: 816 GFQGRSGEPGLPGQSGVPGVKGSRGESGLPGFPGSFGLPGLKGEPGEVGFPGPEGDIGQP 875

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG--------LPGEPGLDGIPGRNGMDG 218
           G PG QG+PGD G  G  G +G PG+ G  GR G        +PGEPG +G PG +G  G
Sbjct: 876 GLPGLQGLPGDNGIPGEVGVVGRPGQDGFPGRKGERGEVGNSIPGEPGRNGRPGGDGFPG 935

Query: 219 I------------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +                   G+ G+ G  GIPG  G +G  G  G  G  G+ G++G PG
Sbjct: 936 LNGLKGEKGGPGLGGIPGNDGERGVIGLPGIPGEQGRSGLPGFKGENGEPGRQGLDGFPG 995



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 99/201 (49%), Gaps = 32/201 (15%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK---GAPGVVGPPGPQGIPGD 156
            QGF     +   PG +G +G KG  G  G  G+ G++GE+   G PG  GP G QG  G 
Sbjct: 1158 QGFKGERGDNGFPGERGRVGLKGFPGEPGLNGIPGQKGERGFSGFPGEEGPVGNQGFRGR 1217

Query: 157  EGKR---------GPKGDMGYPGPQ---GIPGDEGK------RGPKGDMGYPGRIGLDG- 197
            +G+R         G  G+MG+PG     G+PGD G       +G +GD G PG  G  G 
Sbjct: 1218 KGERGLDGIPGEQGRTGEMGFPGENGRVGVPGDRGPDALDGFKGEQGDFGLPGLPGDPGP 1277

Query: 198  ----------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                      + G  G PG +G PGRNG+ G  G DG+ G  G PG NG  GE G+ GP 
Sbjct: 1278 MPTNFEALPWQKGEKGNPGPEGEPGRNGLAGERGDDGIRGFTGDPGRNGDIGEPGVKGPP 1337

Query: 248  GNRGKSGINGVPGTPAICAYK 268
            GN G SGI G  G   +   K
Sbjct: 1338 GNNGLSGIPGERGRQGLPGAK 1358



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 92/180 (51%), Gaps = 20/180 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP+G +G  G KGE G+ G  GE+G  G +G PG  G  G  G RGP    G+ G 
Sbjct: 1203 PGEEGPVGNQGFRGRKGERGLDGIPGEQGRTGEMGFPGENGRVGVPGDRGPDALDGFKGE 1262

Query: 172  QG---IPGDEGKRGP-----------KGDMGYPGRIGLDGRDGLPGEPGLDGI------P 211
            QG   +PG  G  GP           KG+ G PG  G  GR+GL GE G DGI      P
Sbjct: 1263 QGDFGLPGLPGDPGPMPTNFEALPWQKGEKGNPGPEGEPGRNGLAGERGDDGIRGFTGDP 1322

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            GRNG  G PG  G PG +G+ G  G  G +G+ G +G  G  G++G  G      + R S
Sbjct: 1323 GRNGDIGEPGVKGPPGNNGLSGIPGERGRQGLPGAKGFAGLPGLSGAVGEGYGIYFARHS 1382



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 84/163 (51%), Gaps = 17/163 (10%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGI 153
            V  QGF     E    G+ G  G+ GE+G  GE   +GV G+RG     G  G  G  G+
Sbjct: 1209 VGNQGFRGRKGERGLDGIPGEQGRTGEMGFPGENGRVGVPGDRGPDALDGFKGEQGDFGL 1268

Query: 154  PGDEGKRGP-----------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            PG  G  GP           KG+ G PGP+G PG  G  G +GD G  G  G  GR+G  
Sbjct: 1269 PGLPGDPGPMPTNFEALPWQKGEKGNPGPEGEPGRNGLAGERGDDGIRGFTGDPGRNGDI 1328

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            GEPG+ G PG NG+ GIPG+    G+ G+PG  G  G  G++G
Sbjct: 1329 GEPGVKGPPGNNGLSGIPGER---GRQGLPGAKGFAGLPGLSG 1368



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 96/200 (48%), Gaps = 37/200 (18%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEI---GAKGEMGVKGERGEKGAP------------ 142
             ++GF     +   PG  G +G+ G     G KG+ G+ GE G  G P            
Sbjct: 1041 GLKGFPGDPGQDGLPGFPGMLGEDGLPGFEGLKGDDGIPGEEGRAGRPGRKGEQGDFGFV 1100

Query: 143  -----------GVVGPPGPQGIPGDEGKRGPKGDM------GYPGPQGIPGD-----EGK 180
                       GV+G PG  GIPG  G+ G KG        G+PG +G+ G+     +G 
Sbjct: 1101 GRPGPPGDDAFGVIGEPGDFGIPGQTGRPGEKGMEGEDGFPGFPGLKGMAGEAGYGPQGF 1160

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            +G +GD G+PG  G  G  G PGEPGL+GIPG+ G  G  G  G  G  G  G  G  GE
Sbjct: 1161 KGERGDNGFPGERGRVGLKGFPGEPGLNGIPGQKGERGFSGFPGEEGPVGNQGFRGRKGE 1220

Query: 241  KGMTGPRGNRGKSGINGVPG 260
            +G+ G  G +G++G  G PG
Sbjct: 1221 RGLDGIPGEQGRTGEMGFPG 1240



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 90/179 (50%), Gaps = 28/179 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDEGK--- 159
            PG QG  G  GE   +G +G  GE+G  G PG  GP         PG  G+PG  G    
Sbjct: 1007 PGDQGAFGYPGE---RGVVGAPGEQGFDGTPGRSGPDGLKGFPGDPGQDGLPGFPGMLGE 1063

Query: 160  ------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIP 211
                   G KGD G PG +G  G  G++G +GD G+ GR G  G D  G+ GEPG  GIP
Sbjct: 1064 DGLPGFEGLKGDDGIPGEEGRAGRPGRKGEQGDFGFVGRPGPPGDDAFGVIGEPGDFGIP 1123

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT--GPRGNRGKSGINGVPGTPAICAYK 268
            G+ G    PG+ G+ G+DG PG  G  G  G    GP+G +G+ G NG PG       K
Sbjct: 1124 GQTGR---PGEKGMEGEDGFPGFPGLKGMAGEAGYGPQGFKGERGDNGFPGERGRVGLK 1179



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 88/210 (41%), Gaps = 49/210 (23%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G   S  E   PG  G  G  G  G  GE+G  G  G+ G PG+   PG QG+PGD 
Sbjct: 831  GVPGVKGSRGESGLPGFPGSFGLPGLKGEPGEVGFPGPEGDIGQPGL---PGLQGLPGDN 887

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRG---------------PKGD---------------- 186
            G  G  G +G PG  G PG +G+RG               P GD                
Sbjct: 888  GIPGEVGVVGRPGQDGFPGRKGERGEVGNSIPGEPGRNGRPGGDGFPGLNGLKGEKGGPG 947

Query: 187  -------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                         +G PG  G  GR GLPG  G +G PGR G+DG PG+    G DG PG
Sbjct: 948  LGGIPGNDGERGVIGLPGIPGEQGRSGLPGFKGENGEPGRQGLDGFPGE--RVGADGFPG 1005

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G  G  G  G RG  G  G  G  GTP 
Sbjct: 1006 APGDQGAFGYPGERGVVGAPGEQGFDGTPG 1035



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 85/166 (51%), Gaps = 17/166 (10%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GP G KGE   +G+ G  GERG  G  G  G PG  GIPG +G+RG  G  G  GP G  
Sbjct: 1156 GPQGFKGE---RGDNGFPGERGRVGLKGFPGEPGLNGIPGQKGERGFSGFPGEEGPVGNQ 1212

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG---MDGIPGKD---GLPGKD 229
            G  G++G +G  G PG  G  G  G PGE G  G+PG  G   +DG  G+    GLPG  
Sbjct: 1213 GFRGRKGERGLDGIPGEQGRTGEMGFPGENGRVGVPGDRGPDALDGFKGEQGDFGLPGLP 1272

Query: 230  GIPGTNGTN--------GEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G PG   TN        GEKG  GP G  G++G+ G  G   I  +
Sbjct: 1273 GDPGPMPTNFEALPWQKGEKGNPGPEGEPGRNGLAGERGDDGIRGF 1318



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 85/167 (50%), Gaps = 25/167 (14%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            IG+ G+ G  G+ G  GE+G +G  G  G PG +G+ G+ G  GP+G  G  G  G PG+
Sbjct: 1114 IGEPGDFGIPGQTGRPGEKGMEGEDGFPGFPGLKGMAGEAGY-GPQGFKGERGDNGFPGE 1172

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---------------GMDGIPGK 222
             G+ G KG   +PG  GL+G  G  GE G  G PG                 G+DGIPG+
Sbjct: 1173 RGRVGLKG---FPGEPGLNGIPGQKGERGFSGFPGEEGPVGNQGFRGRKGERGLDGIPGE 1229

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGP------RGNRGKSGINGVPGTPA 263
             G  G+ G PG NG  G  G  GP      +G +G  G+ G+PG P 
Sbjct: 1230 QGRTGEMGFPGENGRVGVPGDRGPDALDGFKGEQGDFGLPGLPGDPG 1276



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 87/180 (48%), Gaps = 22/180 (12%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            QGF  +     P GL+G     G+ G  G  G  G  GE G PG  G  G  GIPG+EG+
Sbjct: 1028 QGFDGTPGRSGPDGLKG---FPGDPGQDGLPGFPGMLGEDGLPGFEGLKGDDGIPGEEGR 1084

Query: 160  RGP---K---GDMGYPGPQGIPGDE--------GKRGPKGDMGYPGRIGLDGRDGLPGEP 205
             G    K   GD G+ G  G PGD+        G  G  G  G PG  G++G DG PG P
Sbjct: 1085 AGRPGRKGEQGDFGFVGRPGPPGDDAFGVIGEPGDFGIPGQTGRPGEKGMEGEDGFPGFP 1144

Query: 206  GLDGIPGR-----NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL G+ G       G  G  G +G PG+ G  G  G  GE G+ G  G +G+ G +G PG
Sbjct: 1145 GLKGMAGEAGYGPQGFKGERGDNGFPGERGRVGLKGFPGEPGLNGIPGQKGERGFSGFPG 1204



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 99/234 (42%), Gaps = 60/234 (25%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG--IPGDEG 158
            GF     +   PGL G  G  G+ G  GE+GV G  G+ G PG  G  G  G  IPG+ G
Sbjct: 864  GFPGPEGDIGQPGLPGLQGLPGDNGIPGEVGVVGRPGQDGFPGRKGERGEVGNSIPGEPG 923

Query: 159  KRGPKGDMGYPGPQG---------------------------IPGDEGKRGP---KGDMG 188
            + G  G  G+PG  G                           IPG++G+ G    KG+ G
Sbjct: 924  RNGRPGGDGFPGLNGLKGEKGGPGLGGIPGNDGERGVIGLPGIPGEQGRSGLPGFKGENG 983

Query: 189  YPGRIGLDG-------RDGLPGEPG------------LDGIPGRNGMDGIPGK---DGL- 225
             PGR GLDG        DG PG PG            + G PG  G DG PG+   DGL 
Sbjct: 984  EPGRQGLDGFPGERVGADGFPGAPGDQGAFGYPGERGVVGAPGEQGFDGTPGRSGPDGLK 1043

Query: 226  -----PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
                 PG+DG+PG  G  GE G+ G  G +G  GI G  G       K E    
Sbjct: 1044 GFPGDPGQDGLPGFPGMLGEDGLPGFEGLKGDDGIPGEEGRAGRPGRKGEQGDF 1097



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 90/205 (43%), Gaps = 43/205 (20%)

Query: 43  DKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGF 102
           D+GDI D  V   P +  +P      ++ RE EQ                         F
Sbjct: 454 DRGDIGDFGVDGVPGLPGLP-----GLKGREGEQGP-----------------------F 485

Query: 103 CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----VVGPPGPQGIPGDEG 158
            ++ + Y  PG  G +G+ G  G  G  G  G RG  G PG    V GP GP G PG+EG
Sbjct: 486 GDTVQGY--PGESGQVGRPGLDGLPGMRGEPGPRGFDGVPGLGYDVTGPEGPVGFPGEEG 543

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
                 D G PG  G  G  G+RGP+GD       G  G  G PGEPGL G+PG+ G  G
Sbjct: 544 ------DPGIPGEDGRDGIPGERGPRGDDCGVCPGGEPGFRGDPGEPGLFGLPGQPGQSG 597

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGM 243
                G PG  G+PG  G  G KG 
Sbjct: 598 F---QGQPGDPGVPGFPGIPGAKGQ 619



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 71/143 (49%), Gaps = 29/143 (20%)

Query: 151 QGIPGDE--GKRGPKGDM------GYPGPQGIPGDEGKRGPKGD--MGYPGRIGLDGRDG 200
           +G+PG    G RG  GD       G PG  G+ G EG++GP GD   GYPG  G  GR G
Sbjct: 444 RGLPGFSYPGDRGDIGDFGVDGVPGLPGLPGLKGREGEQGPFGDTVQGYPGESGQVGRPG 503

Query: 201 LPGEPGLDGIPGRNGMDGIPGKD----------GLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           L G PG+ G PG  G DG+PG            G PG++G PG  G +G  G+ G RG R
Sbjct: 504 LDGLPGMRGEPGPRGFDGVPGLGYDVTGPEGPVGFPGEEGDPGIPGEDGRDGIPGERGPR 563

Query: 251 ---------GKSGINGVPGTPAI 264
                    G+ G  G PG P +
Sbjct: 564 GDDCGVCPGGEPGFRGDPGEPGL 586



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 82/164 (50%), Gaps = 28/164 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMG--VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           PGL G  G KG  G +G  G  V+G  GE G    VG PG  G+PG  G+ GP+G  G P
Sbjct: 467 PGLPGLPGLKGREGEQGPFGDTVQGYPGESGQ---VGRPGLDGLPGMRGEPGPRGFDGVP 523

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G   +  D    GP+G +G+            PGE G  GIPG +G DGIPG+ G  G D
Sbjct: 524 G---LGYD--VTGPEGPVGF------------PGEEGDPGIPGEDGRDGIPGERGPRGDD 566

Query: 230 ------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
                 G PG  G  GE G+ G  G  G+SG  G PG P +  +
Sbjct: 567 CGVCPGGEPGFRGDPGEPGLFGLPGQPGQSGFQGQPGDPGVPGF 610



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 67/142 (47%), Gaps = 28/142 (19%)

Query: 112 PGLQGPIGQKGEI------GAKGEMGVKGERGEKG----APG------VVGP-------- 147
           PG++GP GQ G+       G KGE G  G RG KG     PG        GP        
Sbjct: 193 PGVKGPKGQMGDPARNPAKGQKGEKGFDGLRGPKGIITTLPGNKPNQISAGPVGDRGDDG 252

Query: 148 ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
               PG  G PG  G+ G  G  G  GP G+PG +G RG +G  G PG  G  G  G  G
Sbjct: 253 YDGRPGVPGYPGQRGENGLPGMAGDKGPFGMPGMQGMRGKRGKDGPPGPFGFKGDKGSNG 312

Query: 204 EPGLDGIPGRNGMDGIPGKDGL 225
            PG DG+PG  G  G PG+ G+
Sbjct: 313 NPGYDGLPGEIGRTGDPGRQGM 334



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 90/211 (42%), Gaps = 62/211 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
           PG+ G  G +G +G +G  G  G +G  G PGV G PG QG  G+ G  G KGD G    
Sbjct: 90  PGIPGYEGLEGPVGPQGYPGCNGTKGLPGVPGVSGLPGIQGPRGEPGFYGTKGDPGDGFY 149

Query: 170 --GPQGIPGDEGKRGP---------------------KGDMGYPGRIGLDGRDGLP---- 202
             GP+G PGD G+RGP                     +G  G PG  G  G+ G P    
Sbjct: 150 GFGPKGDPGDAGRRGPSGDPGIPGRPGPPGPQGPEGRRGQPGTPGVKGPKGQMGDPARNP 209

Query: 203 -----GEPGLDGIPGRNGM----------------------------DGIPGKDGLPGKD 229
                GE G DG+ G  G+                             G+PG  G  G++
Sbjct: 210 AKGQKGEKGFDGLRGPKGIITTLPGNKPNQISAGPVGDRGDDGYDGRPGVPGYPGQRGEN 269

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+PG  G  G  GM G +G RGK G +G PG
Sbjct: 270 GLPGMAGDKGPFGMPGMQGMRGKRGKDGPPG 300



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GP+G  G PG   IPG EG  GP G  GYP   G +G  GLPG PG+ G+PG  G  G P
Sbjct: 82  GPQGMTGIPG---IPGYEGLEGPVGPQGYP---GCNGTKGLPGVPGVSGLPGIQGPRGEP 135

Query: 221 G 221
           G
Sbjct: 136 G 136


>gi|26390235|dbj|BAC25865.1| unnamed protein product [Mus musculus]
          Length = 886

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/181 (42%), Positives = 89/181 (49%), Gaps = 30/181 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           P G  GP G  G+ GAKG+ G  G++G+ GAPG  GP   PGPQG  G  G +G +G  G
Sbjct: 231 PAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQG 290

Query: 168 YPGPQGIPGDEG---------------------KRGPKG---DMGYPGRI---GLDGRDG 200
            PG  G PG  G                     K GPKG   D G PGR    GL G  G
Sbjct: 291 PPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLQGPAG 350

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGE G  G  G +G+DG PG  GL G+ GI G  G  GE+G  G  G  G+ G  G PG
Sbjct: 351 APGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 410

Query: 261 T 261
            
Sbjct: 411 A 411



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 88/189 (46%), Gaps = 39/189 (20%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 87  EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPG 146

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G R               G KG++G
Sbjct: 147 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 206

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG  G  G  G PGE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G
Sbjct: 207 PPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 266

Query: 249 NRGKSGING 257
             G  G  G
Sbjct: 267 PSGAPGPQG 275



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 85/193 (44%), Gaps = 48/193 (24%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQ 172
           GP G  G  GA+G  G +GE G  G  G  GPPG  G PG   D+G+ G KGD G PGPQ
Sbjct: 206 GPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQ 265

Query: 173 G---IPGDEG------------KRGPKGDMGYPGRIGL---------------------- 195
           G    PG +G             +GP G  G+PG  G                       
Sbjct: 266 GPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKD 325

Query: 196 --------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                    G  G  G+PGL G  G  G  G PG DG  G DG PG  G  G++G+ G  
Sbjct: 326 GPKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLP 385

Query: 248 GNRGKSGINGVPG 260
           G RG+ G  G+PG
Sbjct: 386 GQRGERGFPGLPG 398



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 149 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 202

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 203 GEVGPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQK---GDA 259

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 260 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 302



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 88/211 (41%), Gaps = 57/211 (27%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
           QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 250 QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGA 309

Query: 150 -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                            P+G+ GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 310 NGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGP 369

Query: 190 PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
           PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 370 PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 429

Query: 228 -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                ++G PG +G  G  G  G +G+RG++
Sbjct: 430 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 460



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 88/207 (42%), Gaps = 39/207 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 147 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 206

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGRIG 194
            PG  G  G +G PG+ G+ GP G  G+ GP G        GD+G+ G KGD G PG  G
Sbjct: 207 PPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 266

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------------------IPGTNG 236
             G  G  G  G+ G  G  G  G PG  G PG  G                    G +G
Sbjct: 267 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDG 326

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G +G +GP G  G  G+ G  G P 
Sbjct: 327 PKGVRGDSGPPGRAGDPGLQGPAGAPG 353



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 86  GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPP 145

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 146 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 205

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 206 GPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEA 253



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 78/188 (41%), Gaps = 60/188 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
           PGLQGP G  GE         KGE G+ G  G+ GPPGPQG+ G  G      +RG +G 
Sbjct: 343 PGLQGPAGAPGE---------KGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGF 393

Query: 166 MGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGI 210
            G PGP G PG +G  G  GD                G PGR G          PG DG 
Sbjct: 394 PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADGP 444

Query: 211 PGRNGMDGIPGKDG---------------------LPGKDGIPGTNGTNGEKGMTGPRGN 249
           PGR+G  G+ G  G                       GK G  G  G  G  G +GP G 
Sbjct: 445 PGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGA 504

Query: 250 RGKSGING 257
           RG +G  G
Sbjct: 505 RGIAGPQG 512



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 90/211 (42%), Gaps = 63/211 (29%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG------------------ERGEKGAPGVVGPPGP---- 150
           G  G  G+KG  GA G  G+ G                  ERGE+GAPG  G  G     
Sbjct: 11  GEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPP 70

Query: 151 -----------QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                      QGIPG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  
Sbjct: 71  GPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPK 130

Query: 197 GR---------------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG----- 233
           G                 G+PGE G  GI G  G     G  G +G PGKDG  G     
Sbjct: 131 GAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPI 190

Query: 234 ----TNGTNGEKGMTGPRGNRGKSGINGVPG 260
                 G NGEKG  GP G  G +G  G PG
Sbjct: 191 GPPGPAGANGEKGEVGPPGPSGSTGARGAPG 221



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 82/188 (43%), Gaps = 54/188 (28%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGD 165
           +G  G  GA GE G  GE+G  GAPG+      +G+PG +G+             G +G+
Sbjct: 1   MGFPGPKGANGEPGKAGEKGLAGAPGL------RGLPGKDGETGAAGPPGPSGPAGERGE 54

Query: 166 MGYPGP---------------------QGIPGDEGKRG---PKGDMGYPGRIGLDGRDGL 201
            G PGP                     QGIPG+ G  G   P+G+ G+PG  G  G  GL
Sbjct: 55  QGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGL 114

Query: 202 PGEPGLDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G  GL G PG +G  G  G              G+PG+ G  G  G  G++G  G +G 
Sbjct: 115 QGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGP 174

Query: 250 RGKSGING 257
            G  G +G
Sbjct: 175 EGAPGKDG 182



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 73/168 (43%), Gaps = 33/168 (19%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG--------------- 155
           PPG QG  GQ+G +G  G+   +GERG  G PG  G PG QG PG               
Sbjct: 369 PPGPQGLAGQRGIVGLPGQ---RGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPG 425

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG---------------YPGRIGLDGRDG 200
             G  G  G  G PG  G PG +G  G KGD G                PG  G  G+ G
Sbjct: 426 LTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQG 485

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             GE G  G  G +G  G  G  G  G  G  G +G  GE+G+ G RG
Sbjct: 486 DRGEAGAQGPMGPSGPAGARGIAGPQGPRGDKGESGEQGERGLKGHRG 533


>gi|208609645|dbj|BAG72200.1| collagen type I alpha 1 [Carassius auratus]
          Length = 1448

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 78/154 (50%), Gaps = 21/154 (13%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDMGYPGPQGIPGDE 178
           G+ G  G KG+ G  GAPG  GPPG QG+PG+ G       +G +GD G  G  G PG +
Sbjct: 686 GSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGSAGLPGLKGDRGDQGAKGTDGAPGKD 745

Query: 179 GKRG---------------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G RG                KG+ G PG +G +G  G PGE G  G PG  G  G PG D
Sbjct: 746 GIRGMTGPIGPPGPAGAPGDKGETGAPGLVGPNGARGPPGERGETGAPGPAGFAGPPGAD 805

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GLPG  G PG NG  G+ G  GP G  G  G  G
Sbjct: 806 GLPGAKGEPGDNGAKGDAGAPGPAGATGAPGPQG 839



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/145 (48%), Positives = 83/145 (57%), Gaps = 3/145 (2%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KGE GAKGE G +G +G  G  G  G  GP+G PG  G RGP G+ G PG +G PG +
Sbjct: 425 GAKGEAGAKGEAGAQGVQGPPGPSGEEGKRGPRGEPGSAGSRGPPGERGAPGARGFPGAD 484

Query: 179 GKRGPK---GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  GPK   G+ G PG +G  G  G PG  G  G+PG  GM G PG  G  GK G PG  
Sbjct: 485 GSAGPKGATGERGGPGIVGPKGATGEPGRNGEPGLPGSKGMTGSPGSPGPDGKTGAPGNP 544

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G +G  G  GP G RG+ G+ G PG
Sbjct: 545 GQDGRPGPPGPVGARGQPGVMGFPG 569



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 82/186 (44%), Gaps = 36/186 (19%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G +GP G++GE GA G  G  G  G  G PG  G PG  G  GD G  GP G  G PG
Sbjct: 777 PNGARGPPGERGETGAPGPAGFAGPPGADGLPGAKGEPGDNGAKGDAGAPGPAGATGAPG 836

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL----- 225
           PQG  G  G +G +G  G PG  G  G  G  G PG  G  G  G  G PGK+G      
Sbjct: 837 PQGPVGSTGPKGARGAAGPPGATGFPGAAGRVGPPGPAGNAGPAGPSGAPGKEGQKGNRG 896

Query: 226 -------------------------PGKDGIPGTNGTNGEKGMTGPR------GNRGKSG 254
                                    PG +G PG+ GT G  G+ G R      G RG+ G
Sbjct: 897 ETGPAGRTGEVGAAGPPGAPGEKGNPGAEGAPGSAGTPGPAGIAGQRGIVGLPGQRGERG 956

Query: 255 INGVPG 260
             G+PG
Sbjct: 957 FPGLPG 962



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 81/181 (44%), Gaps = 27/181 (14%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +G   +  E    G+QGP G  GE G +G  G  G  G +G PG  G PG +G PG +
Sbjct: 425 GAKGEAGAKGEAGAQGVQGPPGPSGEEGKRGPRGEPGSAGSRGPPGERGAPGARGFPGAD 484

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  GPKG  G  G  GI       GPKG  G PGR   +G  GLPG  G+ G PG  G D
Sbjct: 485 GSAGPKGATGERGGPGI------VGPKGATGEPGR---NGEPGLPGSKGMTGSPGSPGPD 535

Query: 218 ---GIPGKD---------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
              G PG                 G PG  G PG  G  GE G  G RG  G  G  G P
Sbjct: 536 GKTGAPGNPGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGALGATGAP 595

Query: 260 G 260
           G
Sbjct: 596 G 596



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 71/145 (48%), Gaps = 6/145 (4%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E   PGL GP G +G  G +GE G  G  G  G PG  G PG +G PGD G    KGD G
Sbjct: 768 ETGAPGLVGPNGARGPPGERGETGAPGPAGFAGPPGADGLPGAKGEPGDNGA---KGDAG 824

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            PGP G     G  GP+G +G  G  G  G  G PG  G  G  GR G  G  G  G  G
Sbjct: 825 APGPAGA---TGAPGPQGPVGSTGPKGARGAAGPPGATGFPGAAGRVGPPGPAGNAGPAG 881

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGK 252
             G PG  G  G +G TGP G  G+
Sbjct: 882 PSGAPGKEGQKGNRGETGPAGRTGE 906



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 84/178 (47%), Gaps = 36/178 (20%)

Query: 104 NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG----- 158
            +T E   PG+ GP G  GE G  GE G+ G +G  G+PG  GP G  G PG+ G     
Sbjct: 491 GATGERGGPGIVGPKGATGEPGRNGEPGLPGSKGMTGSPGSPGPDGKTGAPGNPGQDGRP 550

Query: 159 -------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------------ 199
                   RG  G MG+PGP+G  G+ GK G +G MG  G  G  G+D            
Sbjct: 551 GPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGALGATGAPGKDGDVGAPGAPGPA 610

Query: 200 ---------GLPGEPGLDGIPGRNGMDGIPGK---DGLPGKDGIPGTNGTNGEKGMTG 245
                    G  G PG  G+ G  G  G PGK    G+PG+ G PG +G+ G++G  G
Sbjct: 611 GPTGERGEQGPAGPPGFQGLTGPQGATGEPGKAGEQGVPGEAGAPGPSGSRGDRGFPG 668



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 82/170 (48%), Gaps = 36/170 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------VVGPPGPQGIPGDE 157
           GL G  G+ G+ GAKG+ G  G  G  GAPG                 GPPG  G PG  
Sbjct: 806 GLPGAKGEPGDNGAKGDAGAPGPAGATGAPGPQGPVGSTGPKGARGAAGPPGATGFPGAA 865

Query: 158 GK---RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG------------------LD 196
           G+    GP G+ G  GP G PG EG++G +G+ G  GR G                   +
Sbjct: 866 GRVGPPGPAGNAGPAGPSGAPGKEGQKGNRGETGPAGRTGEVGAAGPPGAPGEKGNPGAE 925

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
           G  G  G PG  GI G+ G+ G+PG+ G  G  G+PG +G  G++G +GP
Sbjct: 926 GAPGSAGTPGPAGIAGQRGIVGLPGQRGERGFPGLPGQSGEPGKQGPSGP 975



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 90/200 (45%), Gaps = 36/200 (18%)

Query: 118 IGQKGEIGAKGEMGVKGERGEK---------------GAPGVVGPPGPQGIPGDEGKRGP 162
           +G +G  GA+G  G +GE G                 GAPG+ G PG  GI G  G  GP
Sbjct: 340 VGAQGARGAEGPQGARGEPGNPGPAGAAGPAGNNGADGAPGLKGAPGAPGIAGAPGFPGP 399

Query: 163 K------------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           +                  G++G PG +G  G +G+ G +G  G PG  G +G+ G  GE
Sbjct: 400 RGPSGPAGAAGAPGPKGNTGEVGAPGAKGEAGAKGEAGAQGVQGPPGPSGEEGKRGPRGE 459

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGT 261
           PG  G  G  G  G PG  G PG DG  G  G  GE+   G+ GP+G  G+ G NG PG 
Sbjct: 460 PGSAGSRGPPGERGAPGARGFPGADGSAGPKGATGERGGPGIVGPKGATGEPGRNGEPGL 519

Query: 262 PAICAYKRESCSLLPNSETS 281
           P          S  P+ +T 
Sbjct: 520 PGSKGMTGSPGSPGPDGKTG 539



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 89/197 (45%), Gaps = 39/197 (19%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G   S     PPG +G  G +G  GA G  G KG  GE+G PG+VGP G  G PG  G+
Sbjct: 457 RGEPGSAGSRGPPGERGAPGARGFPGADGSAGPKGATGERGGPGIVGPKGATGEPGRNGE 516

Query: 160 RGPKGDMGYPGPQGIPGDEGK---------------------RGPKGDMGYPGRIGLDGR 198
            G  G  G  G  G PG +GK                     RG  G MG+PG  G  G 
Sbjct: 517 PGLPGSKGMTGSPGSPGPDGKTGAPGNPGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGE 576

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDG------------LPGKDGIPGTNGTNGEKGMTGP 246
            G PGE    G+ G  G  G PGKDG              G+ G  G  G  G +G+TGP
Sbjct: 577 AGKPGE---RGVMGALGATGAPGKDGDVGAPGAPGPAGPTGERGEQGPAGPPGFQGLTGP 633

Query: 247 R---GNRGKSGINGVPG 260
           +   G  GK+G  GVPG
Sbjct: 634 QGATGEPGKAGEQGVPG 650



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 85/191 (44%), Gaps = 48/191 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------QGIPGDEGKRGP 162
            PG QGP+G  G  GA+G  G  G  G  GA G VGPPGP          G PG EG++G 
Sbjct: 835  PGPQGPVGSTGPKGARGAAGPPGATGFPGAAGRVGPPGPAGNAGPAGPSGAPGKEGQKGN 894

Query: 163  KGDMGYPGPQGI------------PGDEGKRGPKGDMGYPGRIGLDGRDG---LPGEPGL 207
            +G+ G  G  G              G+ G  G  G  G PG  G+ G+ G   LPG+ G 
Sbjct: 895  RGETGPAGRTGEVGAAGPPGAPGEKGNPGAEGAPGSAGTPGPAGIAGQRGIVGLPGQRGE 954

Query: 208  DGIPGRNGMDGIPGKDGLPG------------------------KDGIPGTNGTNGEKGM 243
             G PG  G  G PGK G  G                        ++G PG  G+ G  G 
Sbjct: 955  RGFPGLPGQSGEPGKQGPSGPSGERGPPGPMGPPGLAGPPGEPGREGTPGNEGSAGRDGA 1014

Query: 244  TGPRGNRGKSG 254
             GP+G+RG++G
Sbjct: 1015 AGPKGDRGETG 1025



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 81/188 (43%), Gaps = 42/188 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------------------VVGPP 148
           G  GP G  GE G  GE GV G  G  GAPG                          GPP
Sbjct: 566 GFPGPKGAAGEAGKPGERGVMGALGATGAPGKDGDVGAPGAPGPAGPTGERGEQGPAGPP 625

Query: 149 G------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL- 201
           G      PQG  G+ GK    G+ G PG  G PG  G R   GD G+PG  G  G  G  
Sbjct: 626 GFQGLTGPQGATGEPGK---AGEQGVPGEAGAPGPSGSR---GDRGFPGERGAPGPAGPA 679

Query: 202 -----PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                PG  G DG  G  G  G PG  G PG  G+PG  G+ G  G+ G RG++G  G +
Sbjct: 680 GARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGSAGLPGLKGDRGDQGAKGTD 739

Query: 257 GVPGTPAI 264
           G PG   I
Sbjct: 740 GAPGKDGI 747



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 82/186 (44%), Gaps = 36/186 (19%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGYPG---- 170
            G++GE G  G  G +G  G +GA G  G  G QG+PG+ G  GP   +GD G+PG    
Sbjct: 613 TGERGEQGPAGPPGFQGLTGPQGATGEPGKAGEQGVPGEAGAPGPSGSRGDRGFPGERGA 672

Query: 171 --------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------GLDGIPGRNGM 216
                    +G PG  G  G KGD G PG  G  G  GL G P      GL G+ G  G 
Sbjct: 673 PGPAGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGSAGLPGLKGDRGD 732

Query: 217 DGIPGKDGLPGKDGIPGT---------------NGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G DG PGKDGI G                 G  G  G+ GP G RG  G  G  G 
Sbjct: 733 QGAKGTDGAPGKDGIRGMTGPIGPPGPAGAPGDKGETGAPGLVGPNGARGPPGERGETGA 792

Query: 262 PAICAY 267
           P    +
Sbjct: 793 PGPAGF 798



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 168 YPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           + GP G PG+ G     GP+G  G PG+ G DG  G PG PG  G PG  G  G PG  G
Sbjct: 186 FTGPPGEPGEAGAPGPMGPRGAAGPPGKNGEDGESGKPGRPGERGPPGAQGARGFPGTPG 245

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           LPG  G  G +G +G KG TGP G +G+ G  G  GTP  
Sbjct: 246 LPGIKGHRGFSGLDGSKGDTGPAGPKGEPGAAGENGTPGA 285



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 65/129 (50%), Gaps = 15/129 (11%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  GE GE GAPG +GP G  G PG  G+ G  G  G PG +G PG +G R      G+P
Sbjct: 188 GPPGEPGEAGAPGPMGPRGAAGPPGKNGEDGESGKPGRPGERGPPGAQGAR------GFP 241

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  GL         PG+ G  G +G+DG  G  G  G  G PG  G NG  G  GPRG  
Sbjct: 242 GTPGL---------PGIKGHRGFSGLDGSKGDTGPAGPKGEPGAAGENGTPGAMGPRGLP 292

Query: 251 GKSGINGVP 259
           G+ G  G P
Sbjct: 293 GERGRAGPP 301



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/117 (44%), Positives = 61/117 (52%), Gaps = 6/117 (5%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGYPG 170
             GP G+ GE GA G MG    RG  G PG  G  G  G PG  G+RGP   +G  G+PG
Sbjct: 186 FTGPPGEPGEAGAPGPMGP---RGAAGPPGKNGEDGESGKPGRPGERGPPGAQGARGFPG 242

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G+PG +G RG  G  G  G  G  G  G PG  G +G PG  G  G+PG+ G  G
Sbjct: 243 TPGLPGIKGHRGFSGLDGSKGDTGPAGPKGEPGAAGENGTPGAMGPRGLPGERGRAG 299



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKG 164
           P G  GP G+ GE G  G+ G  GERG  GA G  G PG  G+PG +G RG       KG
Sbjct: 204 PRGAAGPPGKNGEDGESGKPGRPGERGPPGAQGARGFPGTPGLPGIKGHRGFSGLDGSKG 263

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           D G  GP+G PG  G+ G  G MG  G  G  GR G P
Sbjct: 264 DTGPAGPKGEPGAAGENGTPGAMGPRGLPGERGRAGPP 301


>gi|5360532|dbj|BAA82043.1| alpha1 type II collagen [Cynops pyrrhogaster]
          Length = 1418

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/142 (45%), Positives = 83/142 (58%), Gaps = 6/142 (4%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP+G KG+ G  G  G KGE+G KG    +GP GPQG PG  G+ G +G  G PG  G  
Sbjct: 378 GPLGPKGQTGDPGVAGFKGEQGPKG---EIGPSGPQGAPGPAGEEGKRGARGEPGAAGPL 434

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG+ GL G  G PGE G+ G+ G  G +G PG+   PG+ G+PG  
Sbjct: 435 GPNGERGAPGNRGFPGQDGLPGPKGAPGERGVAGLGGPKGANGDPGR---PGEPGLPGVR 491

Query: 236 GTNGEKGMTGPRGNRGKSGING 257
           G  G  G  GP+G  G +G  G
Sbjct: 492 GLTGHPGDAGPQGKVGPTGAAG 513



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 98/218 (44%), Gaps = 38/218 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRG---- 161
           PG  G  G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG +G  G    
Sbjct: 299 PGAPGSKGEAGPTGARGPEGPQGPRGESGTPGSPGPSGASGNPGTDGIPGAKGSAGAPGI 358

Query: 162 -----------------------PKGDMGYPGPQGIPGDEGKRG---PKGDMGYPGRIGL 195
                                  PKG  G PG  G  G++G +G   P G  G PG  G 
Sbjct: 359 AGAPGFPGPRGPPGPQGATGPLGPKGQTGDPGVAGFKGEQGPKGEIGPSGPQGAPGPAGE 418

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +G+ G  GEPG  G  G NG  G PG  G PG+DG+PG  G  GE+G+ G  G +G +G 
Sbjct: 419 EGKRGARGEPGAAGPLGPNGERGAPGNRGFPGQDGLPGPKGAPGERGVAGLGGPKGANGD 478

Query: 256 NGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
            G PG P +   +    +  P     Q  + PT    E
Sbjct: 479 PGRPGEPGLPGVR--GLTGHPGDAGPQGKVGPTGAAGE 514



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 89/189 (47%), Gaps = 39/189 (20%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGV---------------VGPPG 149
           E   PGL GP G++G   E G+ G  G++G RG  G PG                 GPPG
Sbjct: 619 EAGTPGLVGPRGERGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGATGPSGPNGAQGPPG 678

Query: 150 PQGIPGDE------GKRGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+       G +G +GD+G  GP+G  G +G RG                KG+ G
Sbjct: 679 LQGMPGERGTSGISGPKGDRGDVGEKGPEGASGKDGARGLTGPIGPPGPSGPNGEKGESG 738

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG +G  G  G PG+ G  G PG  G  G PG DG PG  G  G +G  G+ G  GP+G
Sbjct: 739 PPGPVGAVGARGAPGDRGESGAPGPAGFAGPPGADGQPGIKGEHGESGQKGDAGAPGPQG 798

Query: 249 NRGKSGING 257
             G  G  G
Sbjct: 799 PSGAPGPQG 807



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 82/185 (44%), Gaps = 36/185 (19%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG- 158
           +GF        P GLQGP G  G  G  G  G  G  G  GA    GPPG QG+PG+ G 
Sbjct: 632 RGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGATGPSGPNGA---QGPPGLQGMPGERGT 688

Query: 159 -----KRGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGR 198
                 +G +GD+G  GP+G  G +G RG                KG+ G PG +G  G 
Sbjct: 689 SGISGPKGDRGDVGEKGPEGASGKDGARGLTGPIGPPGPSGPNGEKGESGPPGPVGAVGA 748

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G PG+          G  G PG  G    PG DG PG  G +GE G  G  G  G  G 
Sbjct: 749 RGAPGD---------RGESGAPGPAGFAGPPGADGQPGIKGEHGESGQKGDAGAPGPQGP 799

Query: 256 NGVPG 260
           +G PG
Sbjct: 800 SGAPG 804



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 83/170 (48%), Gaps = 45/170 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP--------------------- 150
           PGL+G  G+ GE GA+G  G  G  GE+G     GPPGP                     
Sbjct: 557 PGLRGLSGKDGETGAQGPSGPAGPAGERG---EQGPPGPNGFQGLPGPPGPPGEGGKPGD 613

Query: 151 QGIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           QG+PG+ G  G   P+G+ G+PG +G  G +G +GP+G               LPG PG 
Sbjct: 614 QGVPGEAGTPGLVGPRGERGFPGERGSSGPQGLQGPRG---------------LPGTPGT 658

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           DG  G  G  G  G  G PG  G+PG  GT+   G++GP+G+RG  G  G
Sbjct: 659 DGPKGATGPSGPNGAQGPPGLQGMPGERGTS---GISGPKGDRGDVGEKG 705



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 84/196 (42%), Gaps = 48/196 (24%)

Query: 113 GLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G QGP   IG  G  GA G  G +G+RG +G PG  GP GP G  G  G RG  G  G P
Sbjct: 396 GEQGPKGEIGPSGPQGAPGPAGEEGKRGARGEPGAAGPLGPNGERGAPGNRGFPGQDGLP 455

Query: 170 GPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           GP+G PG+       G +G  GD G PG  GL G  GL G PG  G  G+ G  G  G+D
Sbjct: 456 GPKGAPGERGVAGLGGPKGANGDPGRPGEPGLPGVRGLTGHPGDAGPQGKVGPTGAAGED 515

Query: 224 ---------------------------------------GLPGKDGIPGTNGTNGEKGMT 244
                                                  G PG  G+ G +G  G +G +
Sbjct: 516 GRPGPPGPQGARGQPGVMGFPGPKGANGEPGKGGEKGLAGAPGLRGLSGKDGETGAQGPS 575

Query: 245 GPRGNRGKSGINGVPG 260
           GP G  G+ G  G PG
Sbjct: 576 GPAGPAGERGEQGPPG 591



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 85/190 (44%), Gaps = 48/190 (25%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           P G  GP G  G+ G KGE G  G++G+ GAPG  GP   PGPQG  G  G +G +G  G
Sbjct: 763 PAGFAGPPGADGQPGIKGEHGESGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQG 822

Query: 168 YPGPQGIPGDEGK------------------------RGPKGDMGYPGRIGLDGRDGLPG 203
            PG  G PG  G+                        +G +GD G PGR          G
Sbjct: 823 PPGATGFPGAAGRVGPPGPNGNPGAPGPPGSAGKDGPKGARGDGGPPGRA---------G 873

Query: 204 EPGLDGIPGRNGMDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           +PGL G  G  G  G PG+D            GL G+ GI G  G  GE+G  G  G  G
Sbjct: 874 DPGLQGPAGAPGEKGEPGEDGPNGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSG 933

Query: 252 KSGINGVPGT 261
           + G  G PG+
Sbjct: 934 EPGKQGSPGS 943



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 79/159 (49%), Gaps = 12/159 (7%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGDEG 158
           PPGLQG  G++G  G  G  G +G+ GEKG  G  G  G +G+             G++G
Sbjct: 676 PPGLQGMPGERGTSGISGPKGDRGDVGEKGPEGASGKDGARGLTGPIGPPGPSGPNGEKG 735

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           + GP G +G  G +G PGD G+ G  G  G+ G  G DG+ G+ GE G  G  G  G  G
Sbjct: 736 ESGPPGPVGAVGARGAPGDRGESGAPGPAGFAGPPGADGQPGIKGEHGESGQKGDAGAPG 795

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G PG  G  G NG  G +G  GP G  G  G  G
Sbjct: 796 PQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAG 834



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 89/207 (42%), Gaps = 39/207 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   ++    P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 679 LQGMPGERGTSGISGPKGDRGDVGEKGPEGASGKDGARGLTGPIGPPGPSGPNGEKGESG 738

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------IPGDEGKRGPKGDMGYPGRIG 194
            PG VG  G +G PGD G+ G  G  G+ GP G      I G+ G+ G KGD G PG  G
Sbjct: 739 PPGPVGAVGARGAPGDRGESGAPGPAGFAGPPGADGQPGIKGEHGESGQKGDAGAPGPQG 798

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------------------IPGTNG 236
             G  G  G  G++G  G  G  G PG  G PG  G                    G +G
Sbjct: 799 PSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGAPGPPGSAGKDG 858

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G +G  GP G  G  G+ G  G P 
Sbjct: 859 PKGARGDGGPPGRAGDPGLQGPAGAPG 885



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 110/287 (38%), Gaps = 94/287 (32%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEG------KRG 161
           P G +G  G +GE GA G +G  GERG    +G PG  G PGP+G PG+ G       +G
Sbjct: 415 PAGEEGKRGARGEPGAAGPLGPNGERGAPGNRGFPGQDGLPGPKGAPGERGVAGLGGPKG 474

Query: 162 PKGDMGYPGPQGIPG------------DEGKRGPKGDMG---------------YPGRIG 194
             GD G PG  G+PG             +GK GP G  G                PG +G
Sbjct: 475 ANGDPGRPGEPGLPGVRGLTGHPGDAGPQGKVGPTGAAGEDGRPGPPGPQGARGQPGVMG 534

Query: 195 LDGRDG------------LPGEPGLDGIPGRNGMDGI------------------PGKD- 223
             G  G            L G PGL G+ G++G  G                   PG + 
Sbjct: 535 FPGPKGANGEPGKGGEKGLAGAPGLRGLSGKDGETGAQGPSGPAGPAGERGEQGPPGPNG 594

Query: 224 --------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN---GVPG 260
                               G+PG+ G PG  G  GE+G  G RG+ G  G+    G+PG
Sbjct: 595 FQGLPGPPGPPGEGGKPGDQGVPGEAGTPGLVGPRGERGFPGERGSSGPQGLQGPRGLPG 654

Query: 261 TPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGD 307
           TP     K  +    PN        PP + G      +S I   +GD
Sbjct: 655 TPGTDGPKGATGPSGPNGAQG----PPGLQGMPGERGTSGISGPKGD 697



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 94/262 (35%), Gaps = 92/262 (35%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---------------------- 137
           QG      E  PPG   P G +G  G  G  GVKG RG                      
Sbjct: 188 QGKPGKNGERGPPG---PQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAAGAKGEGGA 244

Query: 138 --EKGAPGVVGPPGPQGIPGDEGKRGPKGDMG------------------------YPGP 171
             E GAPG +GP   +G+PG+ G+ GP G  G                        +PG 
Sbjct: 245 PGENGAPGPMGP---RGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPAGAPGFPG- 300

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
              PG +G+ GP G  G  G  G  G  G PG PG  G  G  G DGIPG  G  G  GI
Sbjct: 301 --APGSKGEAGPTGARGPEGPQGPRGESGTPGSPGPSGASGNPGTDGIPGAKGSAGAPGI 358

Query: 232 P---------------------------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                                       G  G  G KG  GP+G  G SG  G PG PA 
Sbjct: 359 AGAPGFPGPRGPPGPQGATGPLGPKGQTGDPGVAGFKGEQGPKGEIGPSGPQGAPG-PAG 417

Query: 265 CAYKR-------ESCSLLPNSE 279
              KR        +  L PN E
Sbjct: 418 EEGKRGARGEPGAAGPLGPNGE 439



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 76/198 (38%), Gaps = 69/198 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------------------- 149
           PG QGP G  G  G  G  G KG RG +G PG  G PG                      
Sbjct: 794 PGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGAPGPPGS 853

Query: 150 -----PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------RGPKGD 186
                P+G  GD G  G  GD G  GP G PG++G+                   G +G 
Sbjct: 854 AGKDGPKGARGDGGPPGRAGDPGLQGPAGAPGEKGEPGEDGPNGPDGPPGPQGLAGQRGI 913

Query: 187 MGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMDGIPGK 222
           +G PG+ G  G  GLPG   EPG  G PG                       G +G PG 
Sbjct: 914 VGLPGQRGERGFPGLPGPSGEPGKQGSPGSAGDRGPPGPVGPPGLTGPAGEPGREGNPGS 973

Query: 223 DGLPGKDGIPGTNGTNGE 240
           DG PG+DG  G  G  GE
Sbjct: 974 DGPPGRDGSLGVKGDRGE 991



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 87/217 (40%), Gaps = 63/217 (29%)

Query: 112  PGLQGPIGQKGEIGAKGE---------------------MGVKGERGEKGAPGVVGPPGP 150
            PGLQGP G  GE G  GE                     +G+ G+RGE+G PG+   PGP
Sbjct: 875  PGLQGPAGAPGEKGEPGEDGPNGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGL---PGP 931

Query: 151  QGIPGDEGKRG---------------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG- 194
             G PG +G  G                 G  G PG +G PG +G  G  G +G  G  G 
Sbjct: 932  SGEPGKQGSPGSAGDRGPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGSLGVKGDRGE 991

Query: 195  --------------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
                                  G+ G  GE G  G  G +G  G     G+PG  G  G 
Sbjct: 992  TGPVGAPGAPGAPGSPGPVGPTGKQGDRGEAGPQGPLGPSGPAGA---RGMPGPQGPRGD 1048

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             G  GE G  G +G+RG +G+ G+PG P     +  S
Sbjct: 1049 KGEAGEAGERGQKGHRGFTGLQGLPGPPGTAGDQGAS 1085


>gi|297278377|ref|XP_001082953.2| PREDICTED: collagen alpha-2(IX) chain-like [Macaca mulatta]
          Length = 563

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 92/167 (55%), Gaps = 21/167 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPG------DEGKRGP 162
           PG++G  GQ G  G+ G  G   V G+ G KG PG  G PGPQG+PG       EG+ GP
Sbjct: 184 PGMKGSAGQAGRPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGP 243

Query: 163 KGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G++   GPQGI    GD+G+RGP G  G  GR G  G  G PG PG  G+PG  G  G 
Sbjct: 244 RGEI---GPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGSPGIPGPQGLPGIKGNKGS 300

Query: 220 PGKDGL------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PGK G       PG  G+PG  G  GE G  GP+G +G  G  G PG
Sbjct: 301 PGKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPG 347



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 88/159 (55%), Gaps = 21/159 (13%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---G 167
           PPG +G  G +GEIG +G MG KG++GE+         GP G PG +G++GPKG+    G
Sbjct: 234 PPGKEGEPGPRGEIGPQGIMGQKGDQGER---------GPVGQPGPQGRQGPKGEQGSPG 284

Query: 168 YPGPQGIP------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            PGPQG+P      G  GK GP+G +G PG  GL G     GE G  G PG  G  G+ G
Sbjct: 285 IPGPQGLPGIKGNKGSPGKTGPRGGVGDPGVAGLPGEK---GEKGESGEPGPKGQQGVRG 341

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G PG  G  G  G  G  G+ GPRG  G  G+ G PG
Sbjct: 342 EPGYPGPSGDAGAPGVQGYPGLPGPRGLVGNRGVPGQPG 380



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 93/179 (51%), Gaps = 12/179 (6%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            M+G          PG QG  G  G+ G KG  G +GE G +G PG  GPPG +G PG  
Sbjct: 185 GMKGSAGQAGRPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPR 244

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ GP      KGD G  GP G PG +G++GPKG+ G P   G+ G  GLPG  G  G P
Sbjct: 245 GEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGSP---GIPGPQGLPGIKGNKGSP 301

Query: 212 GRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           G+ G  G    PG  GLPG+ G  G +G  G KG  G RG  G  G +G  G P +  Y
Sbjct: 302 GKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGY 360



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/156 (44%), Positives = 84/156 (53%), Gaps = 6/156 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G  G+ G  G  G+KG  G+ G PG  G  G  G+PG  G +G  GD G PG
Sbjct: 165 PKGATGPPGINGKDGISGTPGMKGSAGQAGRPGSPGHQGLAGVPGQPGTKGGPGDQGEPG 224

Query: 171 PQGIPG------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           PQG+PG       EG+ GP+G++G  G +G  G  G  G  G  G  GR G  G  G  G
Sbjct: 225 PQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGSPG 284

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +PG  G+PG  G  G  G TGPRG  G  G+ G+PG
Sbjct: 285 IPGPQGLPGIKGNKGSPGKTGPRGGVGDPGVAGLPG 320



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 79/157 (50%), Gaps = 12/157 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG++GP G  G  GA G  G+ G+ G  G PG+ G  G  G PG  G +G  G  G PG 
Sbjct: 154 PGIRGPQGITGPKGATGPPGINGKDGISGTPGMKGSAGQAGRPGSPGHQGLAGVPGQPGT 213

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G PGD+G+ GP+G  G+ G  G +G  G  GE G  GI G+ G  G  G  G PG    
Sbjct: 214 KGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGP--- 270

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                    +G  GP+G +G  GI G  G P I   K
Sbjct: 271 ---------QGRQGPKGEQGSPGIPGPQGLPGIKGNK 298


>gi|291391892|ref|XP_002712380.1| PREDICTED: alpha 2 type V collagen [Oryctolagus cuniculus]
          Length = 1502

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 475 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 525

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMGYPGR---IGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+ G     GPKG  G PGR    GL G  GL G PG+ G
Sbjct: 526 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 585

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 586 PEGKLGPLGTPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 642



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 462 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 518

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 519 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 575

Query: 236 GTNGEKGMTGPRGNRGKSGI---NGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G  G  G    +G PG P     + +  S+ LP  + S
Sbjct: 576 GLTGNPGVQGPEGKLGPLGTPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 625



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 86/165 (52%), Gaps = 9/165 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 282 GFAGSPGARGFPGAPGLPGLKGHRGHKG---LEGPKGEVGAPGSKGEAGPTGPMGAMGPL 338

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G  G  G PG  G  GIPG +G  G PG  G  G  
Sbjct: 339 GPRGMPGERGRLGPQ---GAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPT 395

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G  G  G++G TGP G  G  G+ G  GT      K  + S 
Sbjct: 396 GARGPEGPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSA 440



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 88/201 (43%), Gaps = 30/201 (14%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  G+ G  GP GP G  G  G R
Sbjct: 282 GFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPR 341

Query: 161 GPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G+ G  GPQG PG        GK GP G +G PG  G  G  G+ GE G  G  G  
Sbjct: 342 GMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPE 401

Query: 215 GMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNR--------------------- 250
           G  G  G+ G P   G  G+PG  GT+G  G  GP G+                      
Sbjct: 402 GPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLPGPPGSPGPQGST 461

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  GI G PG P +  +K E+
Sbjct: 462 GPQGIRGQPGDPGVPGFKGEA 482



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 270 GEPGRNGNTGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 329

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 330 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 389

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G  GP+G RG++G  G  G+
Sbjct: 390 GEAGPTGARGPEGPQGQRGETGPPGPAGS 418



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 750 GPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 809

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 810 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 868

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 869 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGVRGTQGPPGATGFPGS 916



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 91/226 (40%), Gaps = 54/226 (23%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           +  QG       +  PG  GP+G  G  G+ G  G  G +GE G  G  GP GPQG  G+
Sbjct: 350 LGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGE 409

Query: 157 EGKRGPKGDMGYP---------------------------------------GPQGI--- 174
            G  GP G  G P                                       GPQGI   
Sbjct: 410 TGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLPGPPGSPGPQGSTGPQGIRGQ 469

Query: 175 PGDEGKRGPKGDM---GYPGRIGLDGRDGLPGE---------PGLDGIPGRNGMDGIPGK 222
           PGD G  G KG+    G PG  G+ G  G PGE         PG  G PG  G  G PG 
Sbjct: 470 PGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGN 529

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G PG DG+PG  G  GE+G  G  G +G  G  G PG P +   +
Sbjct: 530 RGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGAR 575



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 91/226 (40%), Gaps = 54/226 (23%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGI 153
           V   G         P G  GP+G +G  G +G +G +G  G++GA   PG  GP GP GI
Sbjct: 317 VGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGI 376

Query: 154 PGD---------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL--- 201
           PG          +G+ GP G  G  GPQG  G+ G  GP G  G PG +G DG  G    
Sbjct: 377 PGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGP 436

Query: 202 ---------------------------------PGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                                            PG+PG+ G  G  G  G PG  G+ G 
Sbjct: 437 TGSAGTSGPPGLPGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGP 496

Query: 229 DGIPGTNGTNGEK------GMTGPRGNRGKSGINGVPGTPAICAYK 268
            G PG  G  G +      G  GP G RG  G  G PG+  +   K
Sbjct: 497 IGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPK 542



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 87/203 (42%), Gaps = 51/203 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 299 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 358

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGL------------------PGEPGL 207
            G  G+PG  G  GP    G  G+PG  G+ G  G                   PG  G 
Sbjct: 359 RGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGS 418

Query: 208 DGIPGRNGMDGIPGKDGLPGKD---------------------------GIPGTNGTNGE 240
            G+PG  G DG PG  G  G                             G PG  G  G 
Sbjct: 419 QGLPGAMGTDGTPGAKGPTGSAGTSGPPGLPGPPGSPGPQGSTGPQGIRGQPGDPGVPGF 478

Query: 241 KGMTGPRGNRGKSGINGVPGTPA 263
           KG  GP+G  G  GI G  G P 
Sbjct: 479 KGEAGPKGEPGPHGIQGPIGPPG 501



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 88/190 (46%), Gaps = 39/190 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 604 PPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 663

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PGD G     GP+G+ G PG  G
Sbjct: 664 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERG 723

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
             G  GLPGE G+ G  G +G  G PG  G  G  G PG  G  GE+G+    GP+G+RG
Sbjct: 724 EPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRG 783

Query: 252 KSGINGVPGT 261
             G  G  GT
Sbjct: 784 GIGEKGAEGT 793



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 90/189 (47%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +G  GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 581 PGVQGPEGKLGPLGTPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 640

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 641 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 700

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG+PG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+G+ G +G  G  G 
Sbjct: 701 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGP 760

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 761 PGLQGMPGE 769



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 704 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGL 763

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 764 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 823

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 824 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 870



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 537 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGTP 596

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 597 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 651



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 82/205 (40%), Gaps = 48/205 (23%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 215 PGSVGPVGPRGPQGLQGQQGGVGPAGPPGEPGEPGPMGPIGARGPEGPPGKPGEDGEPGR 274

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 275 NGNTGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGA 334

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 335 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 394

Query: 244 TGPRGNRGKSGINGVPGTPAICAYK 268
           TG RG  G  G  G  G P     +
Sbjct: 395 TGARGPEGPQGQRGETGPPGPAGSQ 419



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 61/123 (49%), Gaps = 21/123 (17%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           +KGE G +               G+VGPPG +G PG  G+ GP G +G+ GPQG  G  G
Sbjct: 817 EKGEPGPR---------------GLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPG 861

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            +      G PG  G  G  G PG  GL G PG +G +G+PG  G+ G  G PG  G  G
Sbjct: 862 VK------GEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGVRGTQGPPGATGFPG 915

Query: 240 EKG 242
             G
Sbjct: 916 SAG 918



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 69/148 (46%), Gaps = 27/148 (18%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           ++G  G PG VGP GP+G  G+ G+RG  G  G PG +G+ G  G  GPKG  G  G +G
Sbjct: 697 DQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVG 756

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG--------------- 239
                   G PGL G+PG  G+ G PG  G  G  G  G  GT G               
Sbjct: 757 DT------GPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPG 810

Query: 240 ------EKGMTGPRGNRGKSGINGVPGT 261
                 EKG  GPRG  G  G  G PG+
Sbjct: 811 PAGPTGEKGEPGPRGLVGPPGSRGNPGS 838



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 829 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 888

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 889 PHGPNGVPGLKGVRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPIGEPGKEGPPGLRG 948

Query: 210 IPGRNG 215
            PG +G
Sbjct: 949 DPGSHG 954



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 76/176 (43%), Gaps = 60/176 (34%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 992  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKAGPTGATGDKGPPGPVGPPGSNGP 1045

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLD------------------GRDGL 201
            +G PGP+      G PG +G  G +GD G PG  GL                   G+ G 
Sbjct: 1046 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGGPGTPGPVGAPGDAGQRGD 1105

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  G  G PGR             GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1106 PGSRGPIGPPGRA------------GKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1149


>gi|395536915|ref|XP_003770454.1| PREDICTED: collagen alpha-1(VI) chain [Sarcophilus harrisii]
          Length = 1137

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/130 (46%), Positives = 69/130 (53%), Gaps = 7/130 (5%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G  G +G+ GE G  G  G  GP G+PGD G+ GP G  GY G +G PG EG R   
Sbjct: 654 GTPGTRGPRGDPGEPGPQGDQGREGPVGVPGDPGEAGPVGPKGYRGDEGPPGLEGPR--- 710

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
              G PG  G  G  GL GE G DG PG NG +G PG  G PG  G PG NG+ G  G+ 
Sbjct: 711 ---GTPGLTGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYPGNRGPPGINGSKGYPGVK 766

Query: 245 GPRGNRGKSG 254
           G  G  G  G
Sbjct: 767 GDEGEAGDPG 776



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/117 (50%), Positives = 65/117 (55%), Gaps = 7/117 (5%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           QG PG    RGP+GD G PGPQG  G EG  G  GD G  G +G  G  G  G PGL+G 
Sbjct: 653 QGTPG---TRGPRGDPGEPGPQGDQGREGPVGVPGDPGEAGPVGPKGYRGDEGPPGLEGP 709

Query: 211 PGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+ G PG  GL    G+DG PG NGT G  G  G  GNRG  GING  G P +
Sbjct: 710 RGTPGLTGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYPGNRGPPGINGSKGYPGV 765



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 75/143 (52%), Gaps = 11/143 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---GPPGPQGIPGDEGKRGPKGDMGY 168
           PG +GP G  GE G +G+   +G  G  G PG     GP GP+G  GDEG  G +G  G 
Sbjct: 656 PGTRGPRGDPGEPGPQGD---QGREGPVGVPGDPGEAGPVGPKGYRGDEGPPGLEGPRGT 712

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG  G PGD G  G +G+ G PG  G +G  G PG PG  G PG NG  G PG  G  G+
Sbjct: 713 PGLTGPPGDPGLMGERGEDGPPGN-GTEGFPGFPGYPGNRGPPGINGSKGYPGVKGDEGE 771

Query: 229 DGIPGTN----GTNGEKGMTGPR 247
            G PG +     T G KG  G R
Sbjct: 772 AGDPGEDNNDISTPGIKGAKGYR 794



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 81/199 (40%), Gaps = 60/199 (30%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G +G+ G+ GE+GE G PG  G  GP G  G +G++G +G+ G  GP+G  G++GKRG  
Sbjct: 489 GERGKPGLPGEKGEAGEPGRQGDLGPVGYQGMKGEKGTRGEKGSRGPKGYKGEKGKRGID 548

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIP------------GRNGMDGIPGKDGLPGK---- 228
           G  G  G  G  G  G  G PG DG              G  G  G PG DG  G+    
Sbjct: 549 GIDGQKGETGYPGLPGCKGSPGFDGAQGPPGPKGDPGSFGPKGEKGTPGDDGEAGRPGNT 608

Query: 229 --------------------------------------------DGIPGTNGTNGEKGMT 244
                                                        G PGT G  G+ G  
Sbjct: 609 GPPGEEGQPGEPGPPGEKGEQGDEGNPGPDGPPGERGGPGERGPQGTPGTRGPRGDPGEP 668

Query: 245 GPRGNRGKSGINGVPGTPA 263
           GP+G++G+ G  GVPG P 
Sbjct: 669 GPQGDQGREGPVGVPGDPG 687



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 94/244 (38%), Gaps = 84/244 (34%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRG--- 161
           E   PGL G  G+ GE G +G++G    +G +GEKG  G  G  GP+G  G++GKRG   
Sbjct: 490 ERGKPGLPGEKGEAGEPGRQGDLGPVGYQGMKGEKGTRGEKGSRGPKGYKGEKGKRGIDG 549

Query: 162 ---PKGDMGYPG------------------------------PQGIPGDEGKRGPKGDM- 187
               KG+ GYPG                               +G PGD+G+ G  G+  
Sbjct: 550 IDGQKGETGYPGLPGCKGSPGFDGAQGPPGPKGDPGSFGPKGEKGTPGDDGEAGRPGNTG 609

Query: 188 -----------------------------------------GYPGRIGLDGRDGLPGEPG 206
                                                    G  G  G  G  G PGEPG
Sbjct: 610 PPGEEGQPGEPGPPGEKGEQGDEGNPGPDGPPGERGGPGERGPQGTPGTRGPRGDPGEPG 669

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             G  GR G  G+PG    PG+ G  G  G  G++G  G  G RG  G+ G PG P +  
Sbjct: 670 PQGDQGREGPVGVPGD---PGEAGPVGPKGYRGDEGPPGLEGPRGTPGLTGPPGDPGLMG 726

Query: 267 YKRE 270
            + E
Sbjct: 727 ERGE 730



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 49/91 (53%), Gaps = 5/91 (5%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPGL+GP G  G  G  G+ G+ GERGE G PG  G  G  G PG  G RGP G  G  G
Sbjct: 703 PPGLEGPRGTPGLTGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYPGNRGPPGINGSKG 761

Query: 171 PQGIPGDEGKRGPKG----DMGYPGRIGLDG 197
             G+ GDEG+ G  G    D+  PG  G  G
Sbjct: 762 YPGVKGDEGEAGDPGEDNNDISTPGIKGAKG 792



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G+ GLPGE G  G PGR G  G  G  G+ G+ G  G  G+ G KG    +G +GK 
Sbjct: 489 GERGKPGLPGEKGEAGEPGRQGDLGPVGYQGMKGEKGTRGEKGSRGPKGY---KGEKGKR 545

Query: 254 GINGVPGTPAICAY 267
           GI+G+ G      Y
Sbjct: 546 GIDGIDGQKGETGY 559


>gi|1340175|emb|CAA28454.1| unnamed protein product [Homo sapiens]
          Length = 1099

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 90/177 (50%), Gaps = 15/177 (8%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +G      E  P G+QGPIG  GE         +G+RG +G PG +GPPGP G  G  
Sbjct: 74  GFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTLGPPGPVGERGAP 124

Query: 158 GKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G  
Sbjct: 125 GNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPE 184

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+ G  G  G  G P +   +
Sbjct: 185 GKLGPLGAPGEDGRPGPPGSIGIKGQPGTMGLPGPKGSNGDPGKPGEAGNPGVPGQR 241



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 82/190 (43%), Gaps = 54/190 (28%)

Query: 115 QGPIGQKGEIG------------AKGEMGVKGERGEKGAPGV------------------ 144
           +GP GQ+GE G            A G  G  G +G  G+PG                   
Sbjct: 1   EGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGPKGPTGSPGTSGPPGSAGPPGSPGPQGS 60

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGRIGLDGR 198
            GP G  G+PGD G +G  G  G PGP GI      PG+EGKRGP+GD            
Sbjct: 61  TGPQGNSGLPGDPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGD------------ 108

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                 PG  G PG  G  G PG  G PG DG+PG  G  GE+G  G  G +G  G  G 
Sbjct: 109 ------PGTLGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR 162

Query: 259 PGTPAICAYK 268
           PG P +   +
Sbjct: 163 PGEPGLPGAR 172



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 90/202 (44%), Gaps = 54/202 (26%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPKG 164
           E   PG+ G  G+KG  G  G  G KG  G  G PG  GPPG QG+PG+    G  GPKG
Sbjct: 318 ERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKG 377

Query: 165 DM------------------------------------GYPGPQGI---------PGDEG 179
           D                                     G PGP+G+         PG  G
Sbjct: 378 DRGGIGEKGAEGTAGNDGAGGLPGPLGPPGPAGLLGEKGEPGPRGLVGPPGSRGNPGSRG 437

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           + GP G +G+ G  G DG+ G+ GEPG    PG+ G  G PG  GL    G PG +G NG
Sbjct: 438 ENGPTGAVGFAGPQGSDGQPGVKGEPGE---PGQKGDAGSPGPQGL---AGSPGPHGPNG 491

Query: 240 EKGMTGPRGNRGKSGINGVPGT 261
             G+ G RG +G  G  G PG+
Sbjct: 492 VPGLKGGRGTQGPPGATGFPGS 513



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
            G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 589 TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 642

Query: 166 MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 643 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 702

Query: 220 PGKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 703 PGSRGPIGHLGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 746



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 93/213 (43%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    KG PG +G PGP+G  GD GK G  G+ G 
Sbjct: 178 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIKGQPGTMGLPGPKGSNGDPGKPGEAGNPGV 237

Query: 169 PGPQGIP------------------GDEGKRGP--------------------------- 183
           PG +G P                  G+ G++GP                           
Sbjct: 238 PGQRGAPGKDGKVGPYGPPGPPGLRGERGEQGPPGPTGFQGHPGPPGPPGEGGKPGDQGV 297

Query: 184 ------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                       +G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 298 PGGPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 357

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 358 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 390



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 70/117 (59%), Gaps = 9/117 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+ G +GP+G +G   P 
Sbjct: 134 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLG---PL 190

Query: 173 GIPGDEGKRGPKGDMG---YPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G PG++G+ GP G +G    PG +GL    G +G PG+PG  G PG  G  G PGKD
Sbjct: 191 GAPGEDGRPGPPGSIGIKGQPGTMGLPGPKGSNGDPGKPGEAGNPGVPGQRGAPGKD 247



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 96/232 (41%), Gaps = 66/232 (28%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP G   P G P
Sbjct: 134 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 193

Query: 155 GDEGKRGPKGD---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----- 200
           G++G+ GP G          MG PGP+G  GD GK G  G+ G PG+ G  G+DG     
Sbjct: 194 GEDGRPGPPGSIGIKGQPGTMGLPGPKGSNGDPGKPGEAGNPGVPGQRGAPGKDGKVGPY 253

Query: 201 -------LPGEPGLDGIPGRN--------------------------------------- 214
                  L GE G  G PG                                         
Sbjct: 254 GPPGPPGLRGERGEQGPPGPTGFQGHPGPPGPPGEGGKPGDQGVPGGPGAVGPLGPRGER 313

Query: 215 ---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G  G PG  GLPG+ G+ G +G +G KG  GP G  G +G  G+ G P 
Sbjct: 314 GNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPG 365



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 51/90 (56%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G +G  G 
Sbjct: 658 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGHLGRAGK 717

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
           +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 718 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 747



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 79/160 (49%), Gaps = 18/160 (11%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGYPGPQGIP 175
           G++G  G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G  G PG +GI 
Sbjct: 311 GERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIA 370

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------DGIPGRNGMDGIPGKD 223
           G  G +G +G +G  G  G  G DG  G PG              G PG  G+ G PG  
Sbjct: 371 GTPGPKGDRGGIGEKGAEGTAGNDGAGGLPGPLGPPGPAGLLGEKGEPGPRGLVGPPGSR 430

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G PG     G NG  G  G  GP+G+ G+ G+ G PG P 
Sbjct: 431 GNPGSR---GENGPTGAVGFAGPQGSDGQPGVKGEPGEPG 467



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 426 PPGSRGNPGSRGENGPTGAVGFAGPQGSDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 485

Query: 171 PQ---GIPGDEGKR---GPKGDMGYPGRIG 194
           P    G+PG +G R   GP G  G+PG  G
Sbjct: 486 PHGPNGVPGLKGGRGTQGPPGATGFPGSAG 515



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAP---GVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G  GP G  G+ G KGE G  G++G+ G+P   G+ G PGP G  G  G +G +G  G P
Sbjct: 446 GFAGPQGSDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPP 505

Query: 170 GPQGIPGDEGK 180
           G  G PG  G+
Sbjct: 506 GATGFPGSAGR 516


>gi|47682816|gb|AAH70507.1| Surfactant protein D [Rattus norvegicus]
          Length = 374

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 88/163 (53%), Gaps = 6/163 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP+G KGE G+ GE G KGERG      +VGPPG  GI G  GK GP G  G  GP
Sbjct: 77  PGPRGPVGPKGENGSAGEPGPKGERG------LVGPPGSPGISGPAGKEGPSGKQGNIGP 130

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QG PG +G+ GPKG++G PG  G  G  G  G  G  G PG  G  G  G  G  G  G 
Sbjct: 131 QGKPGPKGEAGPKGEVGAPGMQGSAGAKGPAGPKGERGAPGEQGAPGNAGAAGPAGPAGP 190

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            G  G+ G  G+ G RG  G  GI G  G P   A +++  +L
Sbjct: 191 QGAPGSRGPPGLKGDRGAPGDRGIKGESGLPDSAALRQQMEAL 233



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 73/153 (47%), Gaps = 19/153 (12%)

Query: 102 FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            C+ T+   P G  G  G++G  G KG+ G+ G  G  G PG  GP GP+G  G  G+ G
Sbjct: 38  LCSPTENGLP-GRDGRDGREGPRGEKGDPGLPGPMGLSGLPGPRGPVGPKGENGSAGEPG 96

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           PKG+ G  GP G PG  G  G +G  G  G IG  G+ G  GE G               
Sbjct: 97  PKGERGLVGPPGSPGISGPAGKEGPSGKQGNIGPQGKPGPKGEAGPK------------- 143

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                G+ G PG  G+ G KG  GP+G RG  G
Sbjct: 144 -----GEVGAPGMQGSAGAKGPAGPKGERGAPG 171



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/118 (44%), Positives = 59/118 (50%), Gaps = 9/118 (7%)

Query: 152 GIPGD------EGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G+PG       EG RG KGD G PGP    G+PG  G  GPKG+ G  G  G  G  GL 
Sbjct: 45  GLPGRDGRDGREGPRGEKGDPGLPGPMGLSGLPGPRGPVGPKGENGSAGEPGPKGERGLV 104

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  GI G  G +G  GK G  G  G PG  G  G KG  G  G +G +G  G  G
Sbjct: 105 GPPGSPGISGPAGKEGPSGKQGNIGPQGKPGPKGEAGPKGEVGAPGMQGSAGAKGPAG 162


>gi|426222122|ref|XP_004005251.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(XXVII) chain [Ovis
            aries]
          Length = 1857

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 83/145 (57%), Gaps = 9/145 (6%)

Query: 133  KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G+EG +G +G  G 
Sbjct: 1351 RGDRGEPGDPGYPGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGA 1410

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
            PGR G+ G  GLPG     G+ GR G +GI G DG PG+DG  G  G    +G+ G  GP
Sbjct: 1411 PGRRGIQGLQGLPGP---RGVVGRQGPEGIAGPDGFPGRDGQAGQQGEQGDDGDPGPMGP 1467

Query: 247  RGNRGKSGINGVPGTPAICAYKRES 271
             G RG  G+ G+PG      +K ES
Sbjct: 1468 AGKRGDPGVAGLPGAQGPPGFKGES 1492



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 97/205 (47%), Gaps = 45/205 (21%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP--------------- 142
             +QG   +  +   PG  GP G+ G  G+KGE G KG++G+ GAP               
Sbjct: 1367 GVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPGRRGIQGLQGLPGPR 1426

Query: 143  GVVGPPGPQGIPGDE---------------------------GKRGPKGDMGYPGPQGIP 175
            GVVG  GP+GI G +                           GKRG  G  G PG QG P
Sbjct: 1427 GVVGRQGPEGIAGPDGFPGRDGQAGQQGEQGDDGDPGPMGPAGKRGDPGVAGLPGAQGPP 1486

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G +G+ G  G MG PG+ G +G  GLP   GEPG  G PG +G  G PG  GL G  G P
Sbjct: 1487 GFKGESGLPGQMGPPGKRGTEGGMGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPP 1546

Query: 233  GTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G +G  GP G+ GK GI G
Sbjct: 1547 GDVGFKGIQGPRGPPGSVGKEGIIG 1571



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 81/143 (56%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G++G+ G  G  G +G    +GE G PG +GPPG         KRG +G MG 
Sbjct: 1462 PGPMGPAGKRGDPGVAGLPGAQGPPGFKGESGLPGQMGPPG---------KRGTEGGMGL 1512

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G  G  G  GK+G+ G 
Sbjct: 1513 PGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDVGFKGIQGPRGPPGSVGKEGIIGP 1572

Query: 229  DGIPGTNGTNGEKGMTGPRGNRG 251
             GI G +G  G KG  G RG+ G
Sbjct: 1573 LGILGPSGHQGPKGDKGSRGDLG 1595



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 77/145 (53%), Gaps = 12/145 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++
Sbjct: 670 GQKGDPGLSPGKAHDGAKGDMGLPGLTGNPGPLGR---------KGQKGYPGPTGHPGEQ 720

Query: 179 GKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+ GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  
Sbjct: 721 GQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKR 780

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  G RG  G++G PG
Sbjct: 781 GKMGRPGFPGDFGERGPPGLDGNPG 805



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 84/170 (49%), Gaps = 33/170 (19%)

Query: 121 KGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           K   GAKG+MG+ G          +G+KG PG  G PG QG PG EG  G KG   YPG 
Sbjct: 681 KAHDGAKGDMGLPGLTGNPGPLGRKGQKGYPGPTGHPGEQGQPGPEGSPGAKG---YPGR 737

Query: 172 QGIPGDEGKRGPKGDMGY---PGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           QG+PG  G  GPKG  GY   PG  GL   DG  GLPG PG  G  GR G  G  G+ G 
Sbjct: 738 QGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGP 797

Query: 226 PGKDGIPGTN---------------GTNGEKGMTGPRGNRGKSGINGVPG 260
           PG DG PG                 GT G  G  GP+G +G  G  G PG
Sbjct: 798 PGLDGNPGELGLPGPPGVPGLIGDMGTLGPIGYPGPKGMKGLMGNVGEPG 847



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 82/154 (53%), Gaps = 12/154 (7%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G+ G +G  G  G++G+ G PG  G PGP+G  G+EG +G +G  G PG +GI G +
Sbjct: 1361 GYPGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPGRRGIQGLQ 1420

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGL---------DGIP---GRNGMDGIPGKDGLP 226
            G  GP+G +G  G  G+ G DG PG  G          DG P   G  G  G PG  GLP
Sbjct: 1421 GLPGPRGVVGRQGPEGIAGPDGFPGRDGQAGQQGEQGDDGDPGPMGPAGKRGDPGVAGLP 1480

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G PG  G +G  G  GP G RG  G  G+PG
Sbjct: 1481 GAQGPPGFKGESGLPGQMGPPGKRGTEGGMGLPG 1514



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 88/166 (53%), Gaps = 27/166 (16%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
           GP+G+KG+ G  G  G  GE+G+   +G+PG  G PG QG+PG  G  GPKG  GY   P
Sbjct: 700 GPLGRKGQKGYPGPTGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLP 759

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRN--------- 214
           G  G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG           
Sbjct: 760 GLFGLPGSDGER---GLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGELGLPGPPGVP 816

Query: 215 ---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G  G  G  G PG  G+ G  G  GE G+ G +G +G  G++G
Sbjct: 817 GLIGDMGTLGPIGYPGPKGMKGLMGNVGEPGLKGDKGEQGVPGVSG 862



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 84/178 (47%), Gaps = 33/178 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G KG +G  GE G+KG++GE+G PGV G  G QG  G +G  G  G  G PGP 
Sbjct: 829  GYPGPKGMKGLMGNVGEPGLKGDKGEQGVPGVSGDAGFQGDKGSQGLPGFPGARGKPGPV 888

Query: 173  GIPGDEGK---------------RGPKGDMGYPGRIGLDGRDGLPGEPG----------- 206
            G  GD+G                 GP GD G  G  G  G  GLPG  G           
Sbjct: 889  GKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGVKGKHGARGLPGPRGQLGPEGDEGPM 948

Query: 207  -------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                   L+G PGR G  G PG DGL G+ G  G  G  GE+G+ G  G  G+ GI G
Sbjct: 949  GPPGVPGLEGQPGRKGFPGRPGPDGLKGEPGDAGRPGPVGEQGLLGFIGLVGEPGIMG 1006



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 83/190 (43%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPK--------- 163
           GP G +G IG  G  G+ G  GE+G PGV G  G     G PGD G+RGP          
Sbjct: 748 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGEL 807

Query: 164 ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                       GDMG  GP G PG +G +G  G++G PG  G  G  G+PG  G  G  
Sbjct: 808 GLPGPPGVPGLIGDMGTLGPIGYPGPKGMKGLMGNVGEPGLKGDKGEQGVPGVSGDAGFQ 867

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------------------TGPRGNR 250
           G  G  G+P   G PG  G PG  G  G+KG                       GP G +
Sbjct: 868 GDKGSQGLP---GFPGARGKPGPVGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGVK 924

Query: 251 GKSGINGVPG 260
           GK G  G+PG
Sbjct: 925 GKHGARGLPG 934



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 80/171 (46%), Gaps = 21/171 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G++G+ G +G  G KG  G +G PG VG PGP+G  G  G  G  G  G  G 
Sbjct: 711 PGPTGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGE 770

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------------------GI 210
           +G+PG  GKRG  G  G+PG  G  G  GL G PG                       G 
Sbjct: 771 RGLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGELGLPGPPGVPGLIGDMGTLGPIGY 830

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG  GM G+ G  G PG  G  G  G  G  G  G +G++G  G+ G PG 
Sbjct: 831 PGPKGMKGLMGNVGEPGLKGDKGEQGVPGVSGDAGFQGDKGSQGLPGFPGA 881



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 84/193 (43%), Gaps = 57/193 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---------------------------------- 138
            GL+GP G +G +G  G+ GV GERG                                   
Sbjct: 1078 GLKGPPGPQGRLGQPGQQGVAGERGHLGTRGFPGLPGPSGPPGAKGLPGEPGPQGPQGPI 1137

Query: 139  --------KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                    KG PG VG PG   +PG+ G +G  G +G PG QG+ G  G+ G +GD G  
Sbjct: 1138 GPPGEMGPKGPPGAVGEPG---LPGEAGMKGDLGPLGIPGEQGLIGQRGEPGLEGDSGP- 1193

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---------GLPGKDGIPGTNGTNGEK 241
               G DG  G  G+PG DG  G  G +G+ G+D         G+ G +G PG  G  G  
Sbjct: 1194 --AGPDGLKGDRGDPGPDGERGEKGQEGLKGEDGPPGPPGITGVRGPEGKPGKQGEKGRM 1251

Query: 242  GMTGPRGNRGKSG 254
            G  G +G +G+ G
Sbjct: 1252 GAKGAKGYQGQLG 1264



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 80/194 (41%), Gaps = 60/194 (30%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR-------------------- 160
            +G  G +G  G  G  GE+G+ G+ GPPGPQG  G  G++                    
Sbjct: 1056 RGAKGHRGPRGPDGPAGEQGSKGLKGPPGPQGRLGQPGQQGVAGERGHLGTRGFPGLPGP 1115

Query: 161  ----------------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                                        GPKG  G  G  G+PG+ G +G  G +G PG 
Sbjct: 1116 SGPPGAKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEPGLPGEAGMKGDLGPLGIPGE 1175

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG---------M 243
             GL G+    GEPGL+G  G  G DG+ G  G PG DG  G  G  G KG         +
Sbjct: 1176 QGLIGQR---GEPGLEGDSGPAGPDGLKGDRGDPGPDGERGEKGQEGLKGEDGPPGPPGI 1232

Query: 244  TGPRGNRGKSGING 257
            TG RG  GK G  G
Sbjct: 1233 TGVRGPEGKPGKQG 1246



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 83/178 (46%), Gaps = 36/178 (20%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDMGYPGP 171
            +G KG  GA GE G+ GE G KG  G      P GIPG++      G+ G +GD G  GP
Sbjct: 1143 MGPKGPPGAVGEPGLPGEAGMKGDLG------PLGIPGEQGLIGQRGEPGLEGDSGPAGP 1196

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+ GD G  GP G+ G  G+ GL G DG PG PG+ G+    G +G PGK G  G+ G 
Sbjct: 1197 DGLKGDRGDPGPDGERGEKGQEGLKGEDGPPGPPGITGV---RGPEGKPGKQGEKGRMGA 1253

Query: 232  PGTNGTNGE---------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G  G+                     +G  GP G  G+ G  G PG      +K
Sbjct: 1254 KGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHK 1311



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 77/161 (47%), Gaps = 24/161 (14%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G  G KG++G     GE G+ G+RGE G  G  GP GP G+ GD G  GP G+ G 
Sbjct: 1155 PGLPGEAGMKGDLGPLGIPGEQGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDGERGE 1214

Query: 169  PGPQGIPGDE---------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------ 213
             G +G+ G++         G RGP+G    PG+ G  GR G  G  G  G  G       
Sbjct: 1215 KGQEGLKGEDGPPGPPGITGVRGPEGK---PGKQGEKGRMGAKGAKGYQGQLGEMGVPGD 1271

Query: 214  ---NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                G  G  G  G  G  G PG  G  GE G+ G  G++G
Sbjct: 1272 PGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKG 1312



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 94/241 (39%), Gaps = 93/241 (38%)

Query: 113  GLQGPIGQKGE---IGAKGEMGVKGERGEK------------------GAPGVV------ 145
            G  GP+G++G    IG  GE G+ GE+G++                  G PGVV      
Sbjct: 982  GRPGPVGEQGLLGFIGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPGTPGVVGNPGEP 1041

Query: 146  ---------------------GPPGPQGIPGDEGKR------GPKGDMGYPGPQGIPGDE 178
                                 GP GP G  G++G +      GP+G +G PG QG+ G+ 
Sbjct: 1042 GPPGPPGSRGPPGMRGAKGHRGPRGPDGPAGEQGSKGLKGPPGPQGRLGQPGQQGVAGER 1101

Query: 179  G---------------------------------------KRGPKGDMGYPGRIGLDGRD 199
            G                                       + GPKG  G  G  GL G  
Sbjct: 1102 GHLGTRGFPGLPGPSGPPGAKGLPGEPGPQGPQGPIGPPGEMGPKGPPGAVGEPGLPGEA 1161

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            G+ G+ G  GIPG  G+ G  G+ GL G  G  G +G  G++G  GP G RG+ G  G+ 
Sbjct: 1162 GMKGDLGPLGIPGEQGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDGERGEKGQEGLK 1221

Query: 260  G 260
            G
Sbjct: 1222 G 1222



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 55/100 (55%), Gaps = 12/100 (12%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
            +  PPG +G  G  G  G +GE G KG+    GE G PGV G  GP+G PGD      +G
Sbjct: 1497 QMGPPGKRGTEGGMGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDVGFKGIQG 1556

Query: 159  KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
             RGP G +G     GP GI G  G +GPKGD G  G +GL
Sbjct: 1557 PRGPPGSVGKEGIIGPLGILGPSGHQGPKGDKGSRGDLGL 1596



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 90/243 (37%), Gaps = 91/243 (37%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPG------------V 144
            QG      E   PGL+G  G  G  G KG+    G  GERGEKG  G            +
Sbjct: 1176 QGLIGQRGE---PGLEGDSGPAGPDGLKGDRGDPGPDGERGEKGQEGLKGEDGPPGPPGI 1232

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------RGPKGD 186
             G  GP+G PG +G+   KG MG  G +G  G  G+                  RG  G 
Sbjct: 1233 TGVRGPEGKPGKQGE---KGRMGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGP 1289

Query: 187  MGYPGRIGLDGRDGLP-------------------------------------------- 202
             G PGR+G  G  GL                                             
Sbjct: 1290 TGAPGRMGAQGEPGLAGYDGHKGIMGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVG 1349

Query: 203  -----GEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                 GEPG  G PG+ G+ G+   PG+ G PG  G  G  G  G KG  GP+G +GK+G
Sbjct: 1350 DRGDRGEPGDPGYPGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAG 1409

Query: 255  ING 257
              G
Sbjct: 1410 APG 1412



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 80/189 (42%), Gaps = 51/189 (26%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------GKRGPKGDMGYPG 170
            +IG  G+ G +G +G+ GA G+ GP G  G  GDE            G+ G KG  G PG
Sbjct: 911  DIGPPGDNGPEGVKGKHGARGLPGPRGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPG 970

Query: 171  PQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------------GIPG 212
            P G+   PGD G+ GP G+ G  G IGL G  G+ GE G                 G PG
Sbjct: 971  PDGLKGEPGDAGRPGPVGEQGLLGFIGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPG 1030

Query: 213  RNG---------------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              G                     M G  G  G  G DG  G  G+ G KG  GP+G  G
Sbjct: 1031 TPGVVGNPGEPGPPGPPGSRGPPGMRGAKGHRGPRGPDGPAGEQGSKGLKGPPGPQGRLG 1090

Query: 252  KSGINGVPG 260
            + G  GV G
Sbjct: 1091 QPGQQGVAG 1099



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 79/194 (40%), Gaps = 57/194 (29%)

Query: 111  PPGLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVGPPG 149
            PPG  GP G KG+ GA+G  G                     ++G+ G KG PG  GP G
Sbjct: 914  PPGDNGPEGVKGKHGARGLPGPRGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGPDG 973

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIG 194
             +G PGD G+ GP G+ G  G  G+ G+ G  G KGD               MG+PG  G
Sbjct: 974  LKGEPGDAGRPGPVGEQGLLGFIGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPGTPG 1033

Query: 195  ---------------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                                 + G  G  G  G DG  G  G  G+ G  G  G+ G PG
Sbjct: 1034 VVGNPGEPGPPGPPGSRGPPGMRGAKGHRGPRGPDGPAGEQGSKGLKGPPGPQGRLGQPG 1093

Query: 234  TNGTNGEKGMTGPR 247
              G  GE+G  G R
Sbjct: 1094 QQGVAGERGHLGTR 1107



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 88/225 (39%), Gaps = 82/225 (36%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------ 165
            PG QG IGQ+GE G +G+ G  G  G KG     G PGP G  G++G+ G KG+      
Sbjct: 1173 PGEQGLIGQRGEPGLEGDSGPAGPDGLKGD---RGDPGPDGERGEKGQEGLKGEDGPPGP 1229

Query: 166  ---MGYPGPQGIPGDEGKR---GPKGDMGYPGRI-------------------------- 193
                G  GP+G PG +G++   G KG  GY G++                          
Sbjct: 1230 PGITGVRGPEGKPGKQGEKGRMGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGP 1289

Query: 194  -GLDGRDGLPGEPGLDGIPGRNGM------------------------------------ 216
             G  GR G  GEPGL G  G  G+                                    
Sbjct: 1290 TGAPGRMGAQGEPGLAGYDGHKGIMGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVG 1349

Query: 217  ----DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                 G PG  G PG++G+ G  G  G++G  G  G RG+ G  G
Sbjct: 1350 DRGDRGEPGDPGYPGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKG 1394


>gi|348583740|ref|XP_003477630.1| PREDICTED: collagen alpha-1(IV) chain [Cavia porcellus]
          Length = 1670

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 104/209 (49%), Gaps = 48/209 (22%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V   G   +  E   PG+ G   Q+G  G+ GE G KGE+G+ G PG+       GIPG 
Sbjct: 1014 VGGMGLPGTPGEKGVPGIPG---QQGFPGSPGEKGAKGEKGQAGLPGI-------GIPGR 1063

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKG---------DMGYPGRIGLDGRDGLPGE--- 204
             G +G +G  G+PG   IPG++G++G  G           G PG IG  G  GLPGE   
Sbjct: 1064 PGDKGDQGLAGFPG---IPGEKGEKGSAGMPGVPGSPGPKGAPGSIGYQGSPGLPGEKGD 1120

Query: 205  ---PGLDGIPGRNGMDGIPGKDGL---------PGKDGIPGTNGTNGEKGMT-------- 244
               PGLDGIPG  G  G+PG  GL         PG DGIPG+ G  GE G+         
Sbjct: 1121 KGLPGLDGIPGVKGEAGLPGTPGLIGPTGQKGEPGSDGIPGSAGEKGEPGLPGRGIPGFQ 1180

Query: 245  ---GPRGNRGKSGINGVPGTPAICAYKRE 270
               G +G++G+ G  G+ G+P I   K E
Sbjct: 1181 GAKGDKGSKGEVGFPGLAGSPGIPGPKGE 1209



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 102/213 (47%), Gaps = 30/213 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G    +    PPG QG  G  G  G KGEMG+ G  G+ GAPG VG PG    PG++
Sbjct: 850  GLPGLTGQSGMPGPPGQQGTPGLPGFQGPKGEMGIMGTPGQPGAPGPVGAPG---FPGEK 906

Query: 158  GKRG------PKGDMGYPGPQG---IPGDEGK---------RGPKGDMGYPGRIGLDGRD 199
            G+ G      P+GD G+ G +G   +PG  G          +G KGD G  G+ G  G  
Sbjct: 907  GEHGFPGSSGPRGDPGFKGEKGDVGLPGKPGSMDPVDMGTMKGQKGDQGEKGQTGPTGDK 966

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI---- 255
            G  G+PG  G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G  G  G+    
Sbjct: 967  GSRGDPGTPGVPGKDGQAGHPGQ---PGPKGDPGISGTPGAPGLPGPKGAVGGMGLPGTP 1023

Query: 256  --NGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
               GVPG P    +           E  Q  +P
Sbjct: 1024 GEKGVPGIPGQQGFPGSPGEKGAKGEKGQAGLP 1056



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 88/174 (50%), Gaps = 26/174 (14%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM--- 166
            G  GP G KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +   
Sbjct: 958  GQTGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGISGTPGAPGLPGPKGAVGGM 1017

Query: 167  ------------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPG 206
                        G PG QG PG  G++G KG+        +G PGR G  G  GL G PG
Sbjct: 1018 GLPGTPGEKGVPGIPGQQGFPGSPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGLAGFPG 1077

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            + G  G  G  G+PG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG
Sbjct: 1078 IPGEKGEKGSAGMPGVPGSPGPKGAPGSIGYQGSPGLPGEKGDKGLPGLDGIPG 1131



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 90/193 (46%), Gaps = 35/193 (18%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV---------------KGERGEKGA 141
            V   GF     E+  PG  GP G  G  G KG++G+               KG++G++G 
Sbjct: 897  VGAPGFPGEKGEHGFPGSSGPRGDPGFKGEKGDVGLPGKPGSMDPVDMGTMKGQKGDQGE 956

Query: 142  PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGR 198
             G  GP G      D+G RG  G  G PG  G  G  G+ GPKGD    G PG  GL G 
Sbjct: 957  KGQTGPTG------DKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGISGTPGAPGLPGP 1010

Query: 199  DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG-PR-------GNR 250
             G  G  GL G PG  G+ GIPG+ G PG    PG  G  GEKG  G P        G++
Sbjct: 1011 KGAVGGMGLPGTPGEKGVPGIPGQQGFPGS---PGEKGAKGEKGQAGLPGIGIPGRPGDK 1067

Query: 251  GKSGINGVPGTPA 263
            G  G+ G PG P 
Sbjct: 1068 GDQGLAGFPGIPG 1080



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 82/172 (47%), Gaps = 33/172 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP G  G IG +G  G+ GE+G+KG PG+       GIPG       KG+ G PG 
Sbjct: 1094 PGSPGPKGAPGSIGYQGSPGLPGEKGDKGLPGL------DGIPGV------KGEAGLPGT 1141

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+ G  G++G  G  G PG  G  G  GLPG  G+ G  G  G  G  G+ G PG  G 
Sbjct: 1142 PGLIGPTGQKGEPGSDGIPGSAGEKGEPGLPGR-GIPGFQGAKGDKGSKGEVGFPGLAGS 1200

Query: 232  PGTNGTNGEKG--------------------MTGPRGNRGKSGINGVPGTPA 263
            PG  G  GE+G                    + GP+G+RG  G  GVPG P 
Sbjct: 1201 PGIPGPKGEQGFMGPPGPQGQPGIPGAPGRAVEGPKGDRGPQGQPGVPGLPG 1252



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 81/163 (49%), Gaps = 37/163 (22%)

Query: 114 LQGPIGQKGEIGAKGEMGVKG--------------ERGEKGAPGVVGPPGPQGIPGDEGK 159
            QGP G KGE G  G  GV G              E+G+KG PG       QG+PG    
Sbjct: 225 FQGPKGDKGEQGVSGPPGVPGQAQVQQKGDFAPTGEKGQKGEPGF------QGVPG---- 274

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G KG+ G PGP+G PG +G++G +G  G+PG  G  G   LPG+PGL G  G  G+ G 
Sbjct: 275 VGEKGEPGKPGPRGKPGKDGEKGERGSPGFPGDSGYPG---LPGQPGLKGEKGEAGLPGP 331

Query: 220 PGKDGLPGKDGIPGTN--GTNGEKGMTGPRGNRGKSGINGVPG 260
           PG         + GT   G  GE+G  G  G +G+ G  G PG
Sbjct: 332 PGT--------VIGTGPLGEKGERGYPGAPGLKGEPGPKGYPG 366



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 87/195 (44%), Gaps = 45/195 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP GQKGE G+ G  G  GE+GE G PG       +GIPG +G +G KG  G  G 
Sbjct: 1142 PGLIGPTGQKGEPGSDGIPGSAGEKGEPGLPG-------RGIPGFQGAKGDKGSKGEVGF 1194

Query: 172  QGIPGDEGKRGPKGDMGY---------------PGRI--GLDGRDGLPGEPGLDGIPGRN 214
             G+ G  G  GPKG+ G+               PGR   G  G  G  G+PG+ G+PG  
Sbjct: 1195 PGLAGSPGIPGPKGEQGFMGPPGPQGQPGIPGAPGRAVEGPKGDRGPQGQPGVPGLPGPM 1254

Query: 215  GMDGIPGKDGLPGK---------------------DGIPGTNGTNGEKGMTGPRGNRGKS 253
            G  G+PG DG  G+                      G+PG  G+ G  G  G  G  G  
Sbjct: 1255 GPAGLPGLDGRKGEKGNPGWPGPPGVPGPKGDPGFQGLPGIGGSPGITGSKGDMGLPGVP 1314

Query: 254  GINGVPGTPAICAYK 268
            G  G  G P I   K
Sbjct: 1315 GFQGQKGLPGIQGLK 1329



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 73  EKEQQNSTHNNPWV--WLNAYSRIPLVAMQGFCNSTKEYCP---------PGLQG--PIG 119
           EK Q  S+   P         S  P V  Q       ++ P         PG QG   +G
Sbjct: 217 EKGQMGSSFQGPKGDKGEQGVSGPPGVPGQAQVQQKGDFAPTGEKGQKGEPGFQGVPGVG 276

Query: 120 QKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG 176
           +KGE G    +G+ G  GE+GE+G+PG  G  G  G+PG  G +G KG+ G PGP G   
Sbjct: 277 EKGEPGKPGPRGKPGKDGEKGERGSPGFPGDSGYPGLPGQPGLKGEKGEAGLPGPPGTVI 336

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             G  G KG+ GYPG  GL G  G  G PG+
Sbjct: 337 GTGPLGEKGERGYPGAPGLKGEPGPKGYPGI 367



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 95/258 (36%), Gaps = 103/258 (39%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGE-------RGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           G+ GP G  G IG  G  G  GE       +G+KGAPG  G PG   +PG  G  G  G 
Sbjct: 511 GVPGPKGAPGLIGQPGAKGEPGEIIFDSRLKGDKGAPGFPGQPG---LPGRAGTPGRDGH 567

Query: 166 MGYPGPQGIPGD---EGKRGPKGDMGYPGR------------------------------ 192
            G PGP+G PG    +G+RGP G++G+PG                               
Sbjct: 568 PGLPGPKGSPGSIGLKGERGPPGEVGFPGSRGDIGPPGLPGFGPIGPIGDKGQIGFPGSP 627

Query: 193 ------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK------ 228
                              G  G DGLPG PG  G  G  G  G PG+ GLPG+      
Sbjct: 628 GVPGPPGPKGEAGRTFPLPGPPGADGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAMGQ 687

Query: 229 --------------------------------DGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                                           +G+PG+ G  G+KG  G     G  G+ 
Sbjct: 688 PGIGFPGPPGPKGVDGIPGDMGPPGIPGRPGFNGLPGSPGAPGQKGEPG----VGLPGLK 743

Query: 257 GVPGTPAICAYKRESCSL 274
           G+PG P I     E  S+
Sbjct: 744 GLPGVPGIPGTPGEKGSI 761



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 60/127 (47%), Gaps = 28/127 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           EIG  G+ G KG+RG  G  GV G PGP+G PG  G+ G KG+                 
Sbjct: 488 EIGFPGQPGAKGDRGLPGRDGVEGVPGPKGAPGLIGQPGAKGE----------------- 530

Query: 183 PKGDMGYPGRIGLDGR----DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                  PG I  D R     G PG PG  G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 531 -------PGEIIFDSRLKGDKGAPGFPGQPGLPGRAGTPGRDGHPGLPGPKGSPGSIGLK 583

Query: 239 GEKGMTG 245
           GE+G  G
Sbjct: 584 GERGPPG 590



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 78/174 (44%), Gaps = 35/174 (20%)

Query: 125 GAKGEMGVKGERGEKGA--PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           G  G  G  G++GE G   PG+ G PG  GIPG  G++G  G  G PG  G  G  G +G
Sbjct: 721 GLPGSPGAPGQKGEPGVGLPGLKGLPGVPGIPGTPGEKGSIGGPGVPGEHGAIGPPGLQG 780

Query: 183 PKGDMGYPG--------------------------------RIGLDGRDGLPGEPGLDGI 210
            +GD G PG                                  G+ G  G PG PGLD +
Sbjct: 781 IRGDPGPPGVQGPAGPPGAPGLGPPGAMGPPGGPGLPGSSGPPGVKGEKGFPGFPGLD-M 839

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PG  G  G  G  GL G+ G+PG  G  G  G+ G +G +G+ GI G PG P  
Sbjct: 840 PGPKGDKGAQGLPGLTGQSGMPGPPGQQGTPGLPGFQGPKGEMGIMGTPGQPGA 893



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 91/252 (36%), Gaps = 87/252 (34%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG----------DEGKRGP 162
           G  G  G KG+ G  G  GV+G  G KGAPG++G PG +G PG          D+G  G 
Sbjct: 490 GFPGQPGAKGDRGLPGRDGVEGVPGPKGAPGLIGQPGAKGEPGEIIFDSRLKGDKGAPGF 549

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG------------- 209
            G  G PG  G PG +G  G  G  G PG IGL G  G PGE G  G             
Sbjct: 550 PGQPGLPGRAGTPGRDGHPGLPGPKGSPGSIGLKGERGPPGEVGFPGSRGDIGPPGLPGF 609

Query: 210 -----------------------------------IPGRNGMDGIPGKDGLPGKDGIPGT 234
                                              +PG  G DG+PG  G PG  G  G 
Sbjct: 610 GPIGPIGDKGQIGFPGSPGVPGPPGPKGEAGRTFPLPGPPGADGLPGSPGFPGPQGDRGF 669

Query: 235 NGTNGEKGMTGPRG-----------------------------NRGKSGINGVPGTPAIC 265
            GT G  G+ G +G                               G+ G NG+PG+P   
Sbjct: 670 PGTPGRPGLPGEKGAMGQPGIGFPGPPGPKGVDGIPGDMGPPGIPGRPGFNGLPGSPGAP 729

Query: 266 AYKRESCSLLPN 277
             K E    LP 
Sbjct: 730 GQKGEPGVGLPG 741



 Score = 46.2 bits (108), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 82/194 (42%), Gaps = 43/194 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  GQKGE G    +G+ G +G  G PG+ G PG +G  G  G  G  G +G PG 
Sbjct: 723 PGSPGAPGQKGEPG----VGLPGLKGLPGVPGIPGTPGEKGSIGGPGVPGEHGAIGPPGL 778

Query: 172 QGIPGDEGKRGP-----------------------------------KGDMGYPGRIGLD 196
           QGI GD G  G                                    KG+ G+PG  GLD
Sbjct: 779 QGIRGDPGPPGVQGPAGPPGAPGLGPPGAMGPPGGPGLPGSSGPPGVKGEKGFPGFPGLD 838

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
              G  G+ G  G+PG  G  G+PG    PG+ G PG  G  G KG  G  G  G+ G  
Sbjct: 839 -MPGPKGDKGAQGLPGLTGQSGMPGP---PGQQGTPGLPGFQGPKGEMGIMGTPGQPGAP 894

Query: 257 GVPGTPAICAYKRE 270
           G  G P     K E
Sbjct: 895 GPVGAPGFPGEKGE 908



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 95/250 (38%), Gaps = 98/250 (39%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGV--------------VGPPGPQGIPGDEGKRG 161
           GP+G+KGE G  G  G+KGE G KG PG+               GPPG    PGD G++G
Sbjct: 339 GPLGEKGERGYPGAPGLKGEPGPKGYPGIQGQPGPPGLPIPGQTGPPG---FPGDRGEKG 395

Query: 162 PKGDMG--YPGP--------------------------------------------QGIP 175
            +G  G   PGP                                            QG+ 
Sbjct: 396 DQGLPGVSLPGPKGKDGIPGPPGPPGPPGQPGYTNGIVECQPGPPGDQGPPGAPGQQGLT 455

Query: 176 GDEGKRGPKGD----------------------MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           G+ G++G KGD                      +G+PG+ G  G  GLPG  G++G+PG 
Sbjct: 456 GEIGEKGQKGDSCLICDTEGLRGPPGPQGPPGEIGFPGQPGAKGDRGLPGRDGVEGVPGP 515

Query: 214 NGMDGI---PGKDGLPGK----------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+   PG  G PG+           G PG  G  G  G  G  G  G  G+ G  G
Sbjct: 516 KGAPGLIGQPGAKGEPGEIIFDSRLKGDKGAPGFPGQPGLPGRAGTPGRDGHPGLPGPKG 575

Query: 261 TPAICAYKRE 270
           +P     K E
Sbjct: 576 SPGSIGLKGE 585


>gi|7949133|ref|NP_037010.1| pulmonary surfactant-associated protein D precursor [Rattus
           norvegicus]
 gi|464487|sp|P35248.1|SFTPD_RAT RecName: Full=Pulmonary surfactant-associated protein D;
           Short=PSP-D; Short=SP-D; AltName: Full=CP4; AltName:
           Full=Lung surfactant protein D; Flags: Precursor
 gi|207036|gb|AAA42170.1| primary translation product of SP-D [Rattus norvegicus]
 gi|149036201|gb|EDL90867.1| rCG38764 [Rattus norvegicus]
          Length = 374

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 88/163 (53%), Gaps = 6/163 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP+G KGE G+ GE G KGERG      +VGPPG  GI G  GK GP G  G  GP
Sbjct: 77  PGPRGPVGPKGENGSAGEPGPKGERG------LVGPPGSPGISGPAGKEGPSGKQGNIGP 130

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QG PG +G+ GPKG++G PG  G  G  G  G  G  G PG  G  G  G  G  G  G 
Sbjct: 131 QGKPGPKGEAGPKGEVGAPGMQGSAGAKGPAGPKGERGAPGEQGAPGNAGAAGPAGPAGP 190

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            G  G+ G  G+ G RG  G  GI G  G P   A +++  +L
Sbjct: 191 QGAPGSRGPPGLKGDRGAPGDRGIKGESGLPDSAALRQQMEAL 233



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 73/153 (47%), Gaps = 19/153 (12%)

Query: 102 FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            C+ T+   P G  G  G++G  G KG+ G+ G  G  G PG  GP GP+G  G  G+ G
Sbjct: 38  LCSPTENGLP-GRDGRDGREGPRGEKGDPGLPGPMGLSGLPGPRGPVGPKGENGSAGEPG 96

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           PKG+ G  GP G PG  G  G +G  G  G IG  G+ G  GE G               
Sbjct: 97  PKGERGLVGPPGSPGISGPAGKEGPSGKQGNIGPQGKPGPKGEAGPK------------- 143

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                G+ G PG  G+ G KG  GP+G RG  G
Sbjct: 144 -----GEVGAPGMQGSAGAKGPAGPKGERGAPG 171



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/118 (44%), Positives = 59/118 (50%), Gaps = 9/118 (7%)

Query: 152 GIPGD------EGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G+PG       EG RG KGD G PGP    G+PG  G  GPKG+ G  G  G  G  GL 
Sbjct: 45  GLPGRDGRDGREGPRGEKGDPGLPGPMGLSGLPGPRGPVGPKGENGSAGEPGPKGERGLV 104

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  GI G  G +G  GK G  G  G PG  G  G KG  G  G +G +G  G  G
Sbjct: 105 GPPGSPGISGPAGKEGPSGKQGNIGPQGKPGPKGEAGPKGEVGAPGMQGSAGAKGPAG 162


>gi|410902795|ref|XP_003964879.1| PREDICTED: collagen alpha-1(V) chain-like [Takifugu rubripes]
          Length = 1837

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 89/159 (55%), Gaps = 24/159 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------------GPQGIPGD 156
           PGL GP+GQ GE G+ G +G +G+ GE GA G+VGP                GPQ   G 
Sbjct: 639 PGLLGPVGQPGEKGSNGPVGPRGQAGEPGARGLVGPRGPPGPPGQPGIIGTDGPQ---GS 695

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G +GP G++G PG QG PG EG  G +G +G PG  G  G+ G+PG PG++G PG    
Sbjct: 696 KGNQGPAGEIGPPGQQGNPGVEGLPGSQGPIGLPGEKGSQGKQGMPGLPGINGPPGH--- 752

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
              PG++G  G+ G+ G  G  G  G  G RG +G  G+
Sbjct: 753 ---PGREGPAGEKGLQGLPGPQGPAGYPGIRGVKGADGV 788



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 92/194 (47%), Gaps = 39/194 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
           GL GP G KG++G  G  G+ G RG  G PG+ G  G  G+PG  G +G +GD G PG  
Sbjct: 583 GLPGPPGLKGKLGKTGRSGMDGGRGIPGDPGLKGDRGFDGLPGLPGNKGHRGDRGKPGLL 642

Query: 171 -PQGIPGDEGKRGP---KGDMGYPGRIGL------------------------------D 196
            P G PG++G  GP   +G  G PG  GL                               
Sbjct: 643 GPVGQPGEKGSNGPVGPRGQAGEPGARGLVGPRGPPGPPGQPGIIGTDGPQGSKGNQGPA 702

Query: 197 GRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G PG+   PG++G+PG  G  G+PG+ G  GK G+PG  G NG  G  G  G  G+ 
Sbjct: 703 GEIGPPGQQGNPGVEGLPGSQGPIGLPGEKGSQGKQGMPGLPGINGPPGHPGREGPAGEK 762

Query: 254 GINGVPGTPAICAY 267
           G+ G+PG      Y
Sbjct: 763 GLQGLPGPQGPAGY 776



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 89/170 (52%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------GPQGIPGDEGKRGPKGD 165
           PG++G  G +G IG  GE G +G++G  G PG+ GPP      GP G  G +G  GP+G 
Sbjct: 714 PGVEGLPGSQGPIGLPGEKGSQGKQGMPGLPGINGPPGHPGREGPAGEKGLQGLPGPQGP 773

Query: 166 MGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            GYPG +G+ G +G R               G KGD+G  G  G DG  G  GE G +G+
Sbjct: 774 AGYPGIRGVKGADGVRGLKGGKGEKGEDGFPGAKGDLGIKGDRGDDGTTGARGEDGPEGL 833

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G  G  G  G+PG+ G  G  G  G  G  GP+G+ G  G  GVPG
Sbjct: 834 KGQAGPLGDAGGPGVPGEKGKFGVPGLPGYPGRQGPKGSLGFLGSAGVPG 883



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 85/175 (48%), Gaps = 27/175 (15%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G KG  G  GE+G  G++G  G  G+ G  GP G+PG++G +G +G  G PG  G P
Sbjct: 691 GPQGSKGNQGPAGEIGPPGQQGNPGVEGLPGSQGPIGLPGEKGSQGKQGMPGLPGINGPP 750

Query: 176 GDEGKRGPKGD------------MGYPGRIGLDGRDGL---------------PGEPGLD 208
           G  G+ GP G+             GYPG  G+ G DG+               PG  G  
Sbjct: 751 GHPGREGPAGEKGLQGLPGPQGPAGYPGIRGVKGADGVRGLKGGKGEKGEDGFPGAKGDL 810

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           GI G  G DG  G  G  G +G+ G  G  G+ G  G  G +GK G+ G+PG P 
Sbjct: 811 GIKGDRGDDGTTGARGEDGPEGLKGQAGPLGDAGGPGVPGEKGKFGVPGLPGYPG 865



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 93/226 (41%), Gaps = 45/226 (19%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
             +   G         P G QG  GQ+G  GA+GE G  G  G+ G  G  G  GP G PG
Sbjct: 875  FLGSAGVPGDKGRRGPAGPQGTGGQRGPNGARGERGANGPTGKPGEKGSAGQDGPSGSPG 934

Query: 156  DEGKRGPKGD------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIG--- 194
            D G +GP+G                   +G+PG +G PG +GK GP G  G  G  G   
Sbjct: 935  DRGPQGPQGRHGEPGPRGPNGPPGKDGLLGHPGQRGEPGFQGKNGPPGPAGVVGPQGKSG 994

Query: 195  ------------------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
                                      G++G  G+PGL G  G++G  G+ G  G  G  G
Sbjct: 995  ETGPPGDRGHPGPPGPPGENGLPGTAGKEGAKGDPGLPGTAGKSGPTGLQGFRGSRGNPG 1054

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
              GT G  GE+G+ GP G  G +G  G  G         +S S+ P
Sbjct: 1055 STGTAGLKGEEGLPGPAGPVGATGERGPAGPAGNVGEPGQSGSVGP 1100



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 89/200 (44%), Gaps = 48/200 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---------------KGERGEKGAPGVVGPPGPQGIPGD 156
           PG QGPIG  GE G++G+ G+               +G  GEKG  G+ GP GP G PG 
Sbjct: 720 PGSQGPIGLPGEKGSQGKQGMPGLPGINGPPGHPGREGPAGEKGLQGLPGPQGPAGYPGI 779

Query: 157 EGKR---------------------GPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGR 192
            G +                     G KGD+G  G +G  G  G R   GP+G  G  G 
Sbjct: 780 RGVKGADGVRGLKGGKGEKGEDGFPGAKGDLGIKGDRGDDGTTGARGEDGPEGLKGQAGP 839

Query: 193 IGLDGRDGLPGE------PGLDGIPGRNGMD---GIPGKDGLPGKDGIPGTNGTNGEKGM 243
           +G  G  G+PGE      PGL G PGR G     G  G  G+PG  G  G  G  G  G 
Sbjct: 840 LGDAGGPGVPGEKGKFGVPGLPGYPGRQGPKGSLGFLGSAGVPGDKGRRGPAGPQGTGGQ 899

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            GP G RG+ G NG  G P 
Sbjct: 900 RGPNGARGERGANGPTGKPG 919



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 90/187 (48%), Gaps = 45/187 (24%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G   +  E  P GL+G   Q G +G  G  GV GE+G+ G PG         +PG  G++
Sbjct: 820 GTTGARGEDGPEGLKG---QAGPLGDAGGPGVPGEKGKFGVPG---------LPGYPGRQ 867

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD------GRDGLPGEPGLDGIPGRN 214
           GPKG +G+ G  G+PGD+G+RGP G  G  G+ G +      G +G  G+PG  G  G++
Sbjct: 868 GPKGSLGFLGSAGVPGDKGRRGPAGPQGTGGQRGPNGARGERGANGPTGKPGEKGSAGQD 927

Query: 215 GMDGIPG------------------------KDGL---PGKDGIPGTNGTNGEKGMTGPR 247
           G  G PG                        KDGL   PG+ G PG  G NG  G  G  
Sbjct: 928 GPSGSPGDRGPQGPQGRHGEPGPRGPNGPPGKDGLLGHPGQRGEPGFQGKNGPPGPAGVV 987

Query: 248 GNRGKSG 254
           G +GKSG
Sbjct: 988 GPQGKSG 994



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 88/215 (40%), Gaps = 45/215 (20%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   +  +  P GLQG  G +G  G+ G  G+KGE G      + GP GP G  G+ G  
Sbjct: 1030 GLPGTAGKSGPTGLQGFRGSRGNPGSTGTAGLKGEEG------LPGPAGPVGATGERGPA 1083

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------- 204
            GP G++G PG  G  G  G  G KG+ G  G  G  G DG PG                 
Sbjct: 1084 GPAGNVGEPGQSGSVGPAGPMGEKGEPGEKGLAGPAGPDGQPGTVGLPGPAGPSGPPGED 1143

Query: 205  -----------------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                                   PG  GI G  G  G PG DG PG  G  G NG  G++
Sbjct: 1144 GDKGETGGSGQKGGKGEKGESGPPGPVGILGPVGQSGPPGVDGEPGPRGQQGMNGAKGDE 1203

Query: 242  GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G  G +G  G  G+ G+PGTP          SL P
Sbjct: 1204 GHRGFKGLPGPEGLQGMPGTPGEKGESGHVGSLGP 1238



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 87/215 (40%), Gaps = 60/215 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGPPGPQGI------------- 153
            G +GP G +GE GA G  G  GE+G        G+PG  GP GPQG              
Sbjct: 898  GQRGPNGARGERGANGPTGKPGEKGSAGQDGPSGSPGDRGPQGPQGRHGEPGPRGPNGPP 957

Query: 154  --------------PGDEGKRGPKGDMGYPGPQGIPGD---------------------- 177
                          PG +GK GP G  G  GPQG  G+                      
Sbjct: 958  GKDGLLGHPGQRGEPGFQGKNGPPGPAGVVGPQGKSGETGPPGDRGHPGPPGPPGENGLP 1017

Query: 178  --EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
               GK G KGD G PG  G  G  GL G  G  G PG  G  G+ G++GLPG     G  
Sbjct: 1018 GTAGKEGAKGDPGLPGTAGKSGPTGLQGFRGSRGNPGSTGTAGLKGEEGLPGPA---GPV 1074

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G  GE+G  GP GN G+ G +G  G       K E
Sbjct: 1075 GATGERGPAGPAGNVGEPGQSGSVGPAGPMGEKGE 1109



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 67/133 (50%), Gaps = 27/133 (20%)

Query: 146 GPPGPQGIP---------------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           GPPGP G+                G+ G+ GP G  G PGP G+         KG +G  
Sbjct: 547 GPPGPVGLSGRPGPQGGPGPTGLKGNRGESGPAGLRGLPGPPGL---------KGKLGKT 597

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---NGTNGEKGMTGPR 247
           GR G+DG  G+PG+PGL G  G +G+ G+PG  G  G  G PG     G  GEKG  GP 
Sbjct: 598 GRSGMDGGRGIPGDPGLKGDRGFDGLPGLPGNKGHRGDRGKPGLLGPVGQPGEKGSNGPV 657

Query: 248 GNRGKSGINGVPG 260
           G RG++G  G  G
Sbjct: 658 GPRGQAGEPGARG 670



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 93/194 (47%), Gaps = 42/194 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG  GP+G  GE G  G  G  GE G+ G+ G  GP G +G PG++G  GP G  G PG 
Sbjct: 1068 PGPAGPVGATGERGPAGPAGNVGEPGQSGSVGPAGPMGEKGEPGEKGLAGPAGPDGQPGT 1127

Query: 171  -----PQGIPGDEGKRGPKGDMGY---------------PGRIGLDGRDGLPGEPGLDGI 210
                 P G  G  G+ G KG+ G                PG +G+ G  G  G PG+DG 
Sbjct: 1128 VGLPGPAGPSGPPGEDGDKGETGGSGQKGGKGEKGESGPPGPVGILGPVGQSGPPGVDGE 1187

Query: 211  P---GRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGMT------------GPRGN 249
            P   G+ GM+G  G +      GLPG +G+ G  GT GEKG +            GPRG 
Sbjct: 1188 PGPRGQQGMNGAKGDEGHRGFKGLPGPEGLQGMPGTPGEKGESGHVGSLGPLGQHGPRGP 1247

Query: 250  RGKSGINGVPGTPA 263
            +G +G  G PG P 
Sbjct: 1248 QGPAGSEGQPGMPG 1261



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 75/167 (44%), Gaps = 33/167 (19%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------------------------ 157
            G +G  G+RGE G  G  GPPGP G+ G +                              
Sbjct: 961  GLLGHPGQRGEPGFQGKNGPPGPAGVVGPQGKSGETGPPGDRGHPGPPGPPGENGLPGTA 1020

Query: 158  GKRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            GK G KGD G PG  G  G    +G RG +G+ G  G  GL G +GLPG  G  G  G  
Sbjct: 1021 GKEGAKGDPGLPGTAGKSGPTGLQGFRGSRGNPGSTGTAGLKGEEGLPGPAGPVGATGER 1080

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G  G PG+ G  G  G  GEKG  G +G  G +G +G PGT
Sbjct: 1081 GPAGPAGNVGEPGQSGSVGPAGPMGEKGEPGEKGLAGPAGPDGQPGT 1127



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 6/99 (6%)

Query: 111  PPGLQGPIGQK------GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            P G+ GP+GQ       GE G +G+ G+ G +G++G  G  G PGP+G+ G  G  G KG
Sbjct: 1169 PVGILGPVGQSGPPGVDGEPGPRGQQGMNGAKGDEGHRGFKGLPGPEGLQGMPGTPGEKG 1228

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            + G+ G  G  G  G RGP+G  G  G+ G+ G  G PG
Sbjct: 1229 ESGHVGSLGPLGQHGPRGPQGPAGSEGQPGMPGGVGEPG 1267



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 57/125 (45%), Gaps = 27/125 (21%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG---- 173
            IG  G  G +G  G KGERG +G PG +GP GPQG P   G+ GP G  G PGP G    
Sbjct: 1383 IGAAGIEGKEGLKGAKGERGIQGPPGKIGPVGPQGQP---GRLGPDGLRGIPGPVGEHGL 1439

Query: 174  --------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                                  GD G +G KG +G  G +G  G  G  G+ GL GI G 
Sbjct: 1440 NGPPGMSGPPGPIGPPGLPGFKGDPGNKGEKGHVGIFGLVGPPGDLGEKGDRGLPGIEGT 1499

Query: 214  NGMDG 218
             G  G
Sbjct: 1500 RGAKG 1504



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 56/124 (45%), Gaps = 24/124 (19%)

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            GA G+ G  G +G  G+ G +GP G +G  GPQG P   G+ GP G  G PG +G  G +
Sbjct: 1384 GAAGIEGKEGLKGAKGERGIQGPPGKIGPVGPQGQP---GRLGPDGLRGIPGPVGEHGLN 1440

Query: 200  ---------------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                 G PG  G  G  G  G+ G PG  G  G  G+PG  GT 
Sbjct: 1441 GPPGMSGPPGPIGPPGLPGFKGDPGNKGEKGHVGIFGLVGPPGDLGEKGDRGLPGIEGTR 1500

Query: 239  GEKG 242
            G KG
Sbjct: 1501 GAKG 1504



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 94/250 (37%), Gaps = 90/250 (36%)

Query: 101  GFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERG---------------EKGAP 142
            G      +  PPG+ G   P GQ+G  GAKG+ G +G +G               EKG  
Sbjct: 1171 GILGPVGQSGPPGVDGEPGPRGQQGMNGAKGDEGHRGFKGLPGPEGLQGMPGTPGEKGES 1230

Query: 143  GVVGPPGPQGIPGDEGKRGPKGDMGYPG-PQGI--PGDEGKR------------------ 181
            G VG  GP G  G  G +GP G  G PG P G+  PG  G++                  
Sbjct: 1231 GHVGSLGPLGQHGPRGPQGPAGSEGQPGMPGGVGEPGSVGEKGDDGDVGDPGPVGQLGVI 1290

Query: 182  GPKGDMGYPGRIGL---------------DGRDGL---------------PGEPGLDGIP 211
            G KGD+G  G  GL               DG  G                PG+ G+DG P
Sbjct: 1291 GAKGDVGDKGDSGLSGTPGPPGPRGTPGEDGSKGTIGPIGFPGDPGPPGEPGDNGIDGGP 1350

Query: 212  GRNGMDGIPGKD---------------------GLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G +G PGK                      G  G +G  G  G  GE+G+ GP G  
Sbjct: 1351 GSKGDNGEPGKVGPPGASGEPGPPGPPGRRGHIGAAGIEGKEGLKGAKGERGIQGPPGKI 1410

Query: 251  GKSGINGVPG 260
            G  G  G PG
Sbjct: 1411 GPVGPQGQPG 1420



 Score = 39.7 bits (91), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 84/223 (37%), Gaps = 72/223 (32%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL GP G +G  G  GE G  G  G  G  G  GP GPQG  G EG+ G  G +G PG  
Sbjct: 1210 GLPGPEGLQGMPGTPGEKGESGHVGSLGPLGQHGPRGPQGPAGSEGQPGMPGGVGEPGSV 1269

Query: 173  GIPGDE------------GKRGPKGDMGYPGRIGL------------------------- 195
            G  GD+            G  G KGD+G  G  GL                         
Sbjct: 1270 GEKGDDGDVGDPGPVGQLGVIGAKGDVGDKGDSGLSGTPGPPGPRGTPGEDGSKGTIGPI 1329

Query: 196  --------------DGRDGLPGEPGLDGIPGRN---------------------GMDGIP 220
                          +G DG PG  G +G PG+                      G  GI 
Sbjct: 1330 GFPGDPGPPGEPGDNGIDGGPGSKGDNGEPGKVGPPGASGEPGPPGPPGRRGHIGAAGIE 1389

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            GK+GL G  G  G  G  G+ G  GP+G  G+ G +G+ G P 
Sbjct: 1390 GKEGLKGAKGERGIQGPPGKIGPVGPQGQPGRLGPDGLRGIPG 1432


>gi|354469200|ref|XP_003497018.1| PREDICTED: collagen alpha-2(I) chain-like [Cricetulus griseus]
          Length = 1444

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 85/181 (46%), Gaps = 24/181 (13%)

Query: 98  AMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            +QG         PPG QG   P G  GE+G  GE G+ GE G    PG  GP G +G P
Sbjct: 616 GVQGGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFG---LPGPAGPRGERGPP 672

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---- 210
           G+ G  GP G +G  GP G PG +G +G  G +G PG  G  G  GLPGE G  G+    
Sbjct: 673 GESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPGNAGASGPGGLPGERGAAGVPGGK 732

Query: 211 --------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                         PGR+G  G PG  G PG  G  G  G  G  G +GP G RG  G  
Sbjct: 733 GEKGETGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPSGPAGPRGSPGER 792

Query: 257 G 257
           G
Sbjct: 793 G 793



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 80/148 (54%), Gaps = 9/148 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G  G +GA G  G +G  GE G PG  GP G +G  G  GK    G+ G+PG  
Sbjct: 172 GLMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGK---AGEDGHPGKA 228

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG+ G  GP+G  G+PG  GL G  GL G  GLDG+ G+ G  G+ G+ G PG++G P
Sbjct: 229 GRPGERGVVGPQGARGFPGTPGLPGFKGLRGHNGLDGLKGQPGAQGVKGEPGAPGENGTP 288

Query: 233 GTNGT------NGEKGMTGPRGNRGKSG 254
           G  G        G  G  GP G RG  G
Sbjct: 289 GQAGARGLPGERGRVGAPGPAGARGSDG 316



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 83/155 (53%), Gaps = 12/155 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +GP G  G+ G KG  G+ G RG  G  G     GPPGPQG+ G +G++GP G  G+
Sbjct: 573 PGPKGPSGDPGKAGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGF 632

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGL 225
              QG+PG  G     G++G PG  GL G  GLPG  G     G PG +G  G  G  G 
Sbjct: 633 ---QGLPGPSGT---AGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGS 686

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G PG +G  GE G  G  GN G SG  G+PG
Sbjct: 687 RGPSGAPGPDGNKGEAGAVGAPGNAGASGPGGLPG 721



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 80/153 (52%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G   +     P G QGP G+ GE G  G  G +G  G  G  G  G PG  G PG
Sbjct: 173 LMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKAGRPG 232

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           + G  GP+G  G+PG  G+PG +G RG  G  G  G+ G  G  G PG PG +G PG+ G
Sbjct: 233 ERGVVGPQGARGFPGTPGLPGFKGLRGHNGLDGLKGQPGAQGVKGEPGAPGENGTPGQAG 292

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+PG+ G  G  G  G  G++G  G  GP G
Sbjct: 293 ARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG 325



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 88/174 (50%), Gaps = 12/174 (6%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G   S     P G +GP+G  G  G  G +G  G RGE G    +G PGP+G  G
Sbjct: 524 LMGPRGLPGSPGNVGPSGKEGPVGLPGIDGRPGPIGPAGARGEAG---NIGFPGPKGPSG 580

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D GK G KG  G  G +G PG +G  G +G  G  G  G  G  G  G PG  G+PG +G
Sbjct: 581 DPGKAGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSG 640

Query: 216 MD---GIPGKDGLPGKDGIPGTNGTNGEK------GMTGPRGNRGKSGINGVPG 260
                G PG+ GLPG+ G+PG  G  GE+      G  GP G  G  G +G PG
Sbjct: 641 TAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGSRGPSGAPG 694



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 88/215 (40%), Gaps = 42/215 (19%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEI------------GAKGEMGVKGERGEKGAPG 143
           L   +G          PGL GP G  G +            G  G  G KGE G KG PG
Sbjct: 383 LTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGETGNKGEPG 442

Query: 144 VVGPPGPQGIPGDEGKRG-------------------------PKGD-----MGYPGPQG 173
             G  GP G  G+EGKRG                         P  D     MG PG +G
Sbjct: 443 SAGAQGPPGPSGEEGKRGSPGEPGSAGPGGPPGLRGSPGSRGLPGADGRAGVMGPPGNRG 502

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             G  G RGP GD G PG  GL G  GLPG PG  G  G+ G  G+PG DG PG  G  G
Sbjct: 503 STGPAGGRGPNGDPGRPGEPGLMGPRGLPGSPGNVGPSGKEGPVGLPGIDGRPGPIGPAG 562

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G  G  GP+G  G  G  G  G P +   +
Sbjct: 563 ARGEAGNIGFPGPKGPSGDPGKAGEKGHPGLAGAR 597



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 95/201 (47%), Gaps = 30/201 (14%)

Query: 113 GLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGP---- 162
           G  GP G +G   + G  GE G+ G RG  G+PG VGP G   P G+PG +G+ GP    
Sbjct: 502 GSTGPAGGRGPNGDPGRPGEPGLMGPRGLPGSPGNVGPSGKEGPVGLPGIDGRPGPIGPA 561

Query: 163 -----KGDMGYPGPQGIPGDEGKRGPKGD------MGYPGRIGLDGRDGLPGEPGLDGIP 211
                 G++G+PGP+G  GD GK G KG        G PG  G +G  G PG  G+ G  
Sbjct: 562 GARGEAGNIGFPGPKGPSGDPGKAGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGK 621

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRGNRGKSGINGVPGTP 262
           G  G  G PG  GLPG  G  G  G  GE+G+          GPRG RG  G +G  G  
Sbjct: 622 GEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPS 681

Query: 263 AICAYKRESCSLLPNSETSQL 283
                +  S +  P+    + 
Sbjct: 682 GPIGSRGPSGAPGPDGNKGEA 702



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 79/155 (50%), Gaps = 9/155 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK---GDMGY 168
            PG  G  G  G  GA G  G  G +GE+G PG +GP G  G PG  G  GP    G+ G 
Sbjct: 999  PGEAGRDGNPGSDGAPGRDGQPGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGE 1058

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGL 225
            PGP G  G  G  GP+G  G     G+ G  G PG+ G  G+P   G NG+ G+PG  G 
Sbjct: 1059 PGPAGSVGPAGAVGPRGPSGP---QGIRGDKGEPGDKGARGLPGFKGHNGLQGLPGLAGQ 1115

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G PG  G  G +G  GP G  GK G +G PG
Sbjct: 1116 HGDQGSPGPVGPAGPRGPAGPSGPVGKDGRSGHPG 1150



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 69/130 (53%), Gaps = 12/130 (9%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGP---KGDMGYPGRIGLDGR 198
           PGP G+    G RGP G +G PGPQG       PG+ G+ GP   +G  G PG+ G DG 
Sbjct: 168 PGPMGL---MGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGH 224

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G  G PG  G+ G  G  G PG  GLPG  G+ G NG +G KG  G +G +G+ G  G 
Sbjct: 225 PGKAGRPGERGVVGPQGARGFPGTPGLPGFKGLRGHNGLDGLKGQPGAQGVKGEPGAPGE 284

Query: 259 PGTPAICAYK 268
            GTP     +
Sbjct: 285 NGTPGQAGAR 294



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 86/193 (44%), Gaps = 33/193 (17%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGE---------------IGAKGEMGVKGERGEKGAPGVV 145
            G    T    PPG  G  G  GE               +G  G +G+ G RGE+G PGV 
Sbjct: 907  GRTGETGASGPPGFTGEKGPSGEPGSAGPPGSPGPQGFLGPPGILGLPGSRGERGLPGVA 966

Query: 146  GP---PGPQGI---------------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
            G    PGP GI               PG  G  G  G  G PG  G PG +G+ G KG+ 
Sbjct: 967  GALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGAPGRDGQPGHKGER 1026

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            GYPG IG  G  G PG  G  G  G++G  G PG  G  G  G  G  G +G +G+ G +
Sbjct: 1027 GYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPAGAVGPRGPSGPQGIRGDK 1086

Query: 248  GNRGKSGINGVPG 260
            G  G  G  G+PG
Sbjct: 1087 GEPGDKGARGLPG 1099



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 77/159 (48%), Gaps = 24/159 (15%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGVVGPPGPQGIPGDEG 158
            P G QGP+G+ GE GA G  G  GE+G  G              G +GPPG  G+PG  G
Sbjct: 899  PRGDQGPVGRTGETGASGPPGFTGEKGPSGEPGSAGPPGSPGPQGFLGPPGILGLPGSRG 958

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            +RG            +PG  G  G  G +G  G  G  G  G  G PG++G PG  G DG
Sbjct: 959  ERG------------LPGVAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDG 1006

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             PG DG PG+DG PG  G  G  G  GP G  G  G +G
Sbjct: 1007 NPGSDGAPGRDGQPGHKGERGYPGNIGPTGAAGAPGPHG 1045



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 84/194 (43%), Gaps = 48/194 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGV------------------KGERGEKGAPGVVGPPGPQGIP 154
           G QGP G  GE G +G  G                   +G  G  G  GV+GPPG +G  
Sbjct: 445 GAQGPPGPSGEEGKRGSPGEPGSAGPGGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGST 504

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------ 208
           G  G RGP GD G PG      + G  GP+G  G PG +G  G++G  G PG+D      
Sbjct: 505 GPAGGRGPNGDPGRPG------EPGLMGPRGLPGSPGNVGPSGKEGPVGLPGIDGRPGPI 558

Query: 209 ------------GIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                       G PG  G  G PGK       GL G  G PG +G NG +G  GP+G +
Sbjct: 559 GPAGARGEAGNIGFPGPKGPSGDPGKAGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQ 618

Query: 251 GKSGINGVPGTPAI 264
           G  G  G  G P  
Sbjct: 619 GGKGEQGPAGPPGF 632



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 72/156 (46%), Gaps = 27/156 (17%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           E+  PG  GP G++G   E GA G  G  G RG  GA      PGP G  G+ G  G  G
Sbjct: 656 EFGLPGPAGPRGERGPPGESGAAGPSGPIGSRGPSGA------PGPDGNKGEAGAVGAPG 709

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGEPGLDGIPG 212
           + G  GP G+PG+      +G  G P            G IG  GRDG  G PG  G PG
Sbjct: 710 NAGASGPGGLPGE------RGAAGVPGGKGEKGETGLRGEIGNPGRDGARGAPGAVGAPG 763

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G  G  G+ G  G  G  G  G+ GE+G  GP G
Sbjct: 764 PAGATGDRGEAGAAGPSGPAGPRGSPGERGEVGPAG 799



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 57/117 (48%), Gaps = 18/117 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
            PG  G +G  G+ G +GE G  G  G  GA G  GP GPQGI GD+G+ G KG  G P  
Sbjct: 1041 PGPHGSVGPAGKHGNRGEPGPAGSVGPAGAVGPRGPSGPQGIRGDKGEPGDKGARGLPGF 1100

Query: 170  ----------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
                            G QG PG  G  GP+G  G  G +G DGR G PG  G  G+
Sbjct: 1101 KGHNGLQGLPGLAGQHGDQGSPGPVGPAGPRGPAGPSGPVGKDGRSGHPGPVGPAGV 1157



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 80/195 (41%), Gaps = 56/195 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGY 168
           PG QG    KGE GA GE G  G+ G +G PG    VG PGP G  G +G  GP G  G 
Sbjct: 270 PGAQG---VKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG- 325

Query: 169 P-------------------GPQGIPGDEGKRGPKGDMGYPGR---------------IG 194
           P                   GP G PG  G  GP+G++G PG                 G
Sbjct: 326 PIGSAGPPGFPGAPGPKGELGPVGNPGPSGPAGPRGEVGLPGLSGPVGPPGNPGANGLTG 385

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGI---------------PGKDGLPGKDGIPGTNGTNG 239
             G  GLPG  G  G+PG  G+ G                PG  G  G+ G  G  G+ G
Sbjct: 386 AKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGETGNKGEPGSAG 445

Query: 240 EKGMTGPRGNRGKSG 254
            +G  GP G  GK G
Sbjct: 446 AQGPPGPSGEEGKRG 460



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 88/184 (47%), Gaps = 33/184 (17%)

Query: 112 PGLQGPIGQKGEIGAKG------------EMGVKGERGEKGAPGVVGPPG---PQGIPGD 156
           PG  GP G +GE+G  G              G+ G +G  G PGV G PG   P+GIPG 
Sbjct: 351 PGPSGPAGPRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGP 410

Query: 157 E------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                        G+ GP G  G  G +G PG  G +GP      PG  G +G+ G PGE
Sbjct: 411 VGAAGATGARGLVGEPGPAGSKGETGNKGEPGSAGAQGP------PGPSGEEGKRGSPGE 464

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PG  G  G  G+ G PG  GLPG DG  G  G  G +G TGP G RG +G  G PG P +
Sbjct: 465 PGSAGPGGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGGRGPNGDPGRPGEPGL 524

Query: 265 CAYK 268
              +
Sbjct: 525 MGPR 528



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 85/174 (48%), Gaps = 19/174 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +G  G++G +GA G  G    RG  G+ G VGP GP G  G  G  G  G  G  GP 
Sbjct: 292 GARGLPGERGRVGAPGPAGA---RGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPV 348

Query: 173 GIPGDEGKRGPKGDMGYPG------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG  G  GP+G++G PG        G  G +GL G  G  G+PG  G  G+PG  G+P
Sbjct: 349 GNPGPSGPAGPRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIP 408

Query: 227 G---------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G           G+ G  G  G KG TG +G  G +G  G PG P+    KR S
Sbjct: 409 GPVGAAGATGARGLVGEPGPAGSKGETGNKGEPGSAGAQGPPG-PSGEEGKRGS 461


>gi|426218403|ref|XP_004003436.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(VI) chain-like
           [Ovis aries]
          Length = 1039

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 87/196 (44%), Gaps = 36/196 (18%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      E   PG  G +G  G  G KGE G +GE+G +G  G  G  G +G+ G +G +
Sbjct: 279 GLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGMDGVDGMK 338

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----- 215
           G  G  G PG +G PG +G +GP G  G  G  GL G  G   EPG DG PGR G     
Sbjct: 339 GESGYPGLPGCKGSPGFDGVQGPPGPKGDAGAFGLKGEKG---EPGADGEPGRPGSTGPP 395

Query: 216 -------------MDGIPGKDGLPGKDGI---------------PGTNGTNGEKGMTGPR 247
                          G  G +G  G DG                PG  G  G+ G  GP+
Sbjct: 396 GDEGEPGEPGPPGEKGEAGDEGNAGPDGAPGERGGPGERGPRGTPGARGPRGDPGEAGPQ 455

Query: 248 GNRGKSGINGVPGTPA 263
           G++G+ G  GVPG P 
Sbjct: 456 GDQGREGPVGVPGDPG 471



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 85/205 (41%), Gaps = 64/205 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------------------- 144
           G+QGP G KG+ GA G  G KGE G  G PG                             
Sbjct: 357 GVQGPPGPKGDAGAFGLKGEKGEPGADGEPGRPGSTGPPGDEGEPGEPGPPGEKGEAGDE 416

Query: 145 --VGP------------------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
              GP                  PG +G  GD G+ GP+GD G  GP G+PGD G+ GP 
Sbjct: 417 GNAGPDGAPGERGGPGERGPRGTPGARGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPI 476

Query: 185 GDMGYPGRIGLDGRDG---------------LPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  GY G  G  G +G               L GE G DG PG NG +G PG  G PG  
Sbjct: 477 GPKGYRGDEGPPGTEGPRGAPGPAGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYPGSR 535

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSG 254
           G PG NGT G  G+ G  G  G  G
Sbjct: 536 GPPGINGTKGYPGLKGDEGEAGDPG 560



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 78/143 (54%), Gaps = 6/143 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G  GE G +G+ G +G  G  G PG  GP GP+G  GDEG  G +G  G PGP
Sbjct: 440 PGARGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGTEGPRGAPGP 499

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G PGD G  G +G+ G PG  G +G  G PG PG  G PG NG  G PG  G  G+ G 
Sbjct: 500 AGPPGDPGLMGERGEDGPPGN-GTEGFPGFPGYPGSRGPPGINGTKGYPGLKGDEGEAGD 558

Query: 232 PGTNGTNGEKGMTGPRGNRGKSG 254
           PG +  +       PRG +G  G
Sbjct: 559 PGEDNND-----IAPRGAKGAKG 576



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 78/184 (42%), Gaps = 42/184 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G++G  G +GE G++G  G KGE+G++G  GV G  G  G PG  G +G  G  G  GP 
Sbjct: 303 GMKGEKGSRGEKGSRGPKGYKGEKGKRGMDGVDGMKGESGYPGLPGCKGSPGFDGVQGPP 362

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------------------PGEPGLD 208
           G  GD G  G KG+ G PG  G  GR G                          G  G D
Sbjct: 363 GPKGDAGAFGLKGEKGEPGADGEPGRPGSTGPPGDEGEPGEPGPPGEKGEAGDEGNAGPD 422

Query: 209 GI---------------PGRNGMDGIPGK---DGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G                PG  G  G PG+    G  G++G  G  G  GE G  GP+G R
Sbjct: 423 GAPGERGGPGERGPRGTPGARGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYR 482

Query: 251 GKSG 254
           G  G
Sbjct: 483 GDEG 486



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 18/119 (15%)

Query: 163 KGDMGYP------------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           +G+ G P                  GP G  G +G++G +G+ G  G  G  G  G  G 
Sbjct: 272 EGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGM 331

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+DG+ G +G  G+PG  G PG DG+ G  G  G+ G  G +G +G+ G +G PG P 
Sbjct: 332 DGVDGMKGESGYPGLPGCKGSPGFDGVQGPPGPKGDAGAFGLKGEKGEPGADGEPGRPG 390



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG---NR 250
           G  G+ GLPGE G  G PGR      PG  G  G  G+ G  G+ GEKG  GP+G    +
Sbjct: 273 GERGKPGLPGEKGEAGDPGR------PGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEK 326

Query: 251 GKSGINGVPGTPAICAY 267
           GK G++GV G      Y
Sbjct: 327 GKRGMDGVDGMKGESGY 343



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 45/108 (41%), Gaps = 30/108 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVK------------------GERGEKGAPG--VVGPPGPQ 151
           PG  GPIG KG  G +G  G +                  GERGE G PG    G PG  
Sbjct: 470 PGEAGPIGPKGYRGDEGPPGTEGPRGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFP 529

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGK----------RGPKGDMGY 189
           G PG  G  G  G  GYPG +G  G+ G           RG KG  GY
Sbjct: 530 GYPGSRGPPGINGTKGYPGLKGDEGEAGDPGEDNNDIAPRGAKGAKGY 577


>gi|432869178|ref|XP_004071661.1| PREDICTED: collagen alpha-1(V) chain-like [Oryzias latipes]
          Length = 1863

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 12/154 (7%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           QG  G +G  GA+G +G+ GE+G +G PG++G PG  G PG  G+ GP G+ G    QG+
Sbjct: 736 QGSPGVQGFPGAQGPIGLPGEKGPQGKPGILGLPGIDGPPGHPGREGPPGEKGL---QGL 792

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           PG +G       +GYPG  G+ G DG+    G+ G  G  G DG PG  G  G  G  G 
Sbjct: 793 PGSQGP------IGYPGTRGVKGADGV---RGMKGSKGEKGEDGFPGIKGDMGIKGDRGD 843

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           NG  G +G  GP G +G++G  G PG P I   K
Sbjct: 844 NGAPGPRGEDGPEGPKGQTGSLGDPGAPGIAGEK 877



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 88/170 (51%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGPIG  G  G KG  GV+G +G KG  G  G P   GI GD G +G +GD G PGP
Sbjct: 793 PGSQGPIGYPGTRGVKGADGVRGMKGSKGEKGEDGFP---GIKGDMGIKGDRGDNGAPGP 849

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------GIPGKDGL 225
           +G  G EG +G  G +G PG  G+ G  G  G PGL G PGR G        G PG  G 
Sbjct: 850 RGEDGPEGPKGQTGSLGDPGAPGIAGEKGKLGVPGLPGYPGRQGAKGSLGFLGAPGVLGE 909

Query: 226 PGKDGIPGTNGTNGEKG------------MTGPRGNRGKSGINGVPGTPA 263
            G+ G  G  G+ G++G             TG  G +G +G +G PG+P 
Sbjct: 910 KGRRGPAGQPGSGGQRGPNGARGGRGARGPTGKPGEKGSAGQDGPPGSPG 959



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 97/204 (47%), Gaps = 36/204 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQG------------- 152
           PGL G  G +G  G  G  G  GE GEKG  G +GP      PGP+G             
Sbjct: 649 PGLPGDKGHRGGSGKPGPAGPAGEPGEKGPQGPLGPRGQPGEPGPRGLVGPKGPLGPPGQ 708

Query: 153 --IPGDEGKRGPKGDM------------GYPGPQGIPGDEGK---RGPKGDMGYPGRIGL 195
             I G +G +G KG++            G PG QG PG +G     G KG  G PG +GL
Sbjct: 709 PGIRGIDGVQGSKGNLGPPGEIGPPGQQGSPGVQGFPGAQGPIGLPGEKGPQGKPGILGL 768

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G DG PG PG +G PG  G+ G+PG  G  G  G  G  G +G +GM G +G +G+ G 
Sbjct: 769 PGIDGPPGHPGREGPPGEKGLQGLPGSQGPIGYPGTRGVKGADGVRGMKGSKGEKGEDGF 828

Query: 256 NGVPGTPAICAYKRESCSLLPNSE 279
            G+ G   I   + ++ +  P  E
Sbjct: 829 PGIKGDMGIKGDRGDNGAPGPRGE 852



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 86/157 (54%), Gaps = 3/157 (1%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKGDMG 167
            P G  G  G+ G +G  G MG KGE GEKG  G+ G    PGP G+PG  G +GP G+ G
Sbjct: 1110 PAGAIGQPGRPGSVGPAGPMGEKGEPGEKGTTGLAGRDGEPGPAGLPGIAGPQGPPGEDG 1169

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
              G  G PG +G +G KG+ G  G  G+ G  G PG  G DG PG  G  G+ G  G  G
Sbjct: 1170 DKGETGGPGQKGSKGDKGEAGPSGPAGIQGPVGPPGPSGADGEPGPRGQQGLNGPKGDEG 1229

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G  G +G +G +GM GP G +G+SG  G  G P +
Sbjct: 1230 PRGFKGASGPSGLQGMPGPPGEKGESGHVGSMGPPGL 1266



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 89/162 (54%), Gaps = 24/162 (14%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGI---------PGDEGKR 160
           G++G  G+KGE    G KG+MG+KG+RG+ GAPG  G  GP+G          PG  G  
Sbjct: 815 GMKGSKGEKGEDGFPGIKGDMGIKGDRGDNGAPGPRGEDGPEGPKGQTGSLGDPGAPGIA 874

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD--- 217
           G KG +G PG  G PG +G +G  G +G PG +G  GR G  G+PG  G  G NG     
Sbjct: 875 GEKGKLGVPGLPGYPGRQGAKGSLGFLGAPGVLGEKGRRGPAGQPGSGGQRGPNGARGGR 934

Query: 218 ------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 G PG+ G  G+DG P   G+ GE+G  GP+G  G++
Sbjct: 935 GARGPTGKPGEKGSAGQDGPP---GSPGEQGPQGPQGRNGET 973



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 78/164 (47%), Gaps = 15/164 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---------------PGD 156
            PG+ GP G  GE G KGE G  G++G KG  G  GP GP GI               PG 
Sbjct: 1156 PGIAGPQGPPGEDGDKGETGGPGQKGSKGDKGEAGPSGPAGIQGPVGPPGPSGADGEPGP 1215

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G++G  G  G  GP+G  G  G  G +G  G PG  G  G  G  G PGL G  G  G 
Sbjct: 1216 RGQQGLNGPKGDEGPRGFKGASGPSGLQGMPGPPGEKGESGHVGSMGPPGLHGPRGPQGP 1275

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+ GLPG  G PG  G  GE G  G  G  G+ GI G  G
Sbjct: 1276 IGGEGQSGLPGGVGQPGLVGEKGEDGEAGDPGPVGEPGIPGAKG 1319



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 90/181 (49%), Gaps = 21/181 (11%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGA---------KGEMGVKGERGEKGAPGVVGP- 147
            +QGF  +      PG +GP G+ G +G           G  G  GE+G +G PG  GP 
Sbjct: 740 GVQGFPGAQGPIGLPGEKGPQGKPGILGLPGIDGPPGHPGREGPPGEKGLQGLPGSQGPI 799

Query: 148 --PGPQGIPGDEGKRGPKGDMGYPGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
             PG +G+ G +G RG KG  G  G  G P   GD G +G +GD G PG  G DG +G  
Sbjct: 800 GYPGTRGVKGADGVRGMKGSKGEKGEDGFPGIKGDMGIKGDRGDNGAPGPRGEDGPEGPK 859

Query: 203 GE------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G+      PG  GI G  G  G+PG  G PG+ G  G+ G  G  G+ G +G RG +G  
Sbjct: 860 GQTGSLGDPGAPGIAGEKGKLGVPGLPGYPGRQGAKGSLGFLGAPGVLGEKGRRGPAGQP 919

Query: 257 G 257
           G
Sbjct: 920 G 920



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/167 (39%), Positives = 80/167 (47%), Gaps = 24/167 (14%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            QG   +  +    G  GP+G  G+ G  G   +KG RG +G PG VGP    G+ G EG 
Sbjct: 1039 QGLPGTAGKEGAKGDPGPLGASGKSGPPG---LKGFRGTRGTPGAVGP---AGLKGGEGL 1092

Query: 160  R---------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                            GP G +G PG    PG  G  GP G+ G PG  G  G  G  GE
Sbjct: 1093 PGVAGAAGATGERGPAGPAGAIGQPG---RPGSVGPAGPMGEKGEPGEKGTTGLAGRDGE 1149

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            PG  G+PG  G  G PG+DG  G+ G PG  G+ G+KG  GP G  G
Sbjct: 1150 PGPAGLPGIAGPQGPPGEDGDKGETGGPGQKGSKGDKGEAGPSGPAG 1196



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 89/191 (46%), Gaps = 33/191 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGYP 169
           G  G  G KG+ G  G  G+ G++G +G  G  GP GP G PG++G +GP   +G  G P
Sbjct: 632 GAPGEAGSKGDRGFDGLPGLPGDKGHRGGSGKPGPAGPAGEPGEKGPQGPLGPRGQPGEP 691

Query: 170 GPQG---------------IPGDEGKRGPKGDM------------GYPGRIGLDGRDG-- 200
           GP+G               I G +G +G KG++            G PG  G  G  G  
Sbjct: 692 GPRGLVGPKGPLGPPGQPGIRGIDGVQGSKGNLGPPGEIGPPGQQGSPGVQGFPGAQGPI 751

Query: 201 -LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            LPGE G  G PG  G+ GI G  G PG++G PG  G  G  G  GP G  G  G+ G  
Sbjct: 752 GLPGEKGPQGKPGILGLPGIDGPPGHPGREGPPGEKGLQGLPGSQGPIGYPGTRGVKGAD 811

Query: 260 GTPAICAYKRE 270
           G   +   K E
Sbjct: 812 GVRGMKGSKGE 822



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 86/192 (44%), Gaps = 45/192 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G  G  GA GE G KG+RG  G PG         +PGD+G RG  G  G  GP
Sbjct: 619 PGKRGHAGVDGGRGAPGEAGSKGDRGFDGLPG---------LPGDKGHRGGSGKPGPAGP 669

Query: 172 QGIPGDEGKRGP---KGDMGYPGRIGL---------------DGRDGL------------ 201
            G PG++G +GP   +G  G PG  GL                G DG+            
Sbjct: 670 AGEPGEKGPQGPLGPRGQPGEPGPRGLVGPKGPLGPPGQPGIRGIDGVQGSKGNLGPPGE 729

Query: 202 ------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                  G PG+ G PG  G  G+PG+ G  GK GI G  G +G  G  G  G  G+ G+
Sbjct: 730 IGPPGQQGSPGVQGFPGAQGPIGLPGEKGPQGKPGILGLPGIDGPPGHPGREGPPGEKGL 789

Query: 256 NGVPGTPAICAY 267
            G+PG+     Y
Sbjct: 790 QGLPGSQGPIGY 801



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 86/209 (41%), Gaps = 57/209 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV------------KGERGEKGAPGVVGP 147
            +G         PPGL GP G +G IG +G+ G+            KGE GE G PG VG 
Sbjct: 1252 KGESGHVGSMGPPGLHGPRGPQGPIGGEGQSGLPGGVGQPGLVGEKGEDGEAGDPGPVGE 1311

Query: 148  PGPQGIPGDEGKRGPKGDM---------------------GYPGPQGIPGDEGKRGPKGD 186
            P   GIPG +G  G KGD                      G  GP G P         GD
Sbjct: 1312 P---GIPGAKGNVGEKGDAGAPGAAGPPGPRGVPGEDGPKGNLGPIGFP---------GD 1359

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------------GLPGKDGIPGT 234
            +G PG  G++G DG PG  G +G PG+ G  G  G+             G  GK+G  G 
Sbjct: 1360 LGPPGEPGVNGADGAPGPKGDNGEPGKAGPTGASGEPGPPGPPGRRGHVGAAGKEGKQGM 1419

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G  GP G  G  G  G PG P 
Sbjct: 1420 KGAKGATGNLGPMGKPGPVGPQGQPGRPG 1448



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 80/184 (43%), Gaps = 51/184 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
            G  GP GQ+G  G KG+ G +G +G  G  G+ G PGP   PG++G+ G  G MG PG  
Sbjct: 1211 GEPGPRGQQGLNGPKGDEGPRGFKGASGPSGLQGMPGP---PGEKGESGHVGSMGPPGLH 1267

Query: 171  ----PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-------- 218
                PQG  G EG+ G  G +G PG +G  G DG  G+PG  G PG  G  G        
Sbjct: 1268 GPRGPQGPIGGEGQSGLPGGVGQPGLVGEKGEDGEAGDPGPVGEPGIPGAKGNVGEKGDA 1327

Query: 219  ----------------------------------IPGKDGLPGKDGIPGTNGTNGEKGMT 244
                                               PG+ G+ G DG PG  G NGE G  
Sbjct: 1328 GAPGAAGPPGPRGVPGEDGPKGNLGPIGFPGDLGPPGEPGVNGADGAPGPKGDNGEPGKA 1387

Query: 245  GPRG 248
            GP G
Sbjct: 1388 GPTG 1391



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/138 (42%), Positives = 75/138 (54%), Gaps = 12/138 (8%)

Query: 111  PPGLQGPIGQK------GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            P G+QGP+G        GE G +G+ G+ G +G++G  G  G  GP G+ G  G  G KG
Sbjct: 1194 PAGIQGPVGPPGPSGADGEPGPRGQQGLNGPKGDEGPRGFKGASGPSGLQGMPGPPGEKG 1253

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            + G+ G  G PG  G RGP+G       IG +G+ GLPG  G  G+ G  G DG  G  G
Sbjct: 1254 ESGHVGSMGPPGLHGPRGPQGP------IGGEGQSGLPGGVGQPGLVGEKGEDGEAGDPG 1307

Query: 225  LPGKDGIPGTNGTNGEKG 242
              G+ GIPG  G  GEKG
Sbjct: 1308 PVGEPGIPGAKGNVGEKG 1325



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 92/215 (42%), Gaps = 54/215 (25%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------P 150
            +G    T     PG  G  G+KG++G  G  G  G +G KG+ G +G PG         P
Sbjct: 856  EGPKGQTGSLGDPGAPGIAGEKGKLGVPGLPGYPGRQGAKGSLGFLGAPGVLGEKGRRGP 915

Query: 151  QGIPGDEGKRGPK---------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRI-- 193
             G PG  G+RGP                G+ G  G  G PG  G++GP+G  G  G    
Sbjct: 916  AGQPGSGGQRGPNGARGGRGARGPTGKPGEKGSAGQDGPPGSPGEQGPQGPQGRNGETGP 975

Query: 194  ----GLDGRDGLPGEPGLDGIPGRNGMDGIP------------GKDGLPG---------- 227
                G  G+DGLPG PG  G PG  G +G P            G+ G  G          
Sbjct: 976  KGPNGPPGKDGLPGHPGQRGEPGFQGKNGPPGPPGVVGPQGKSGEIGPTGDRGHPGSPGP 1035

Query: 228  --KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              + G+PGT G  G KG  GP G  GKSG  G+ G
Sbjct: 1036 PGEQGLPGTAGKEGAKGDPGPLGASGKSGPPGLKG 1070



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 71/177 (40%), Gaps = 54/177 (30%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG------------------ERGE 138
            V   G      E    G  GP+G+ G  GAKG +G KG                  E G 
Sbjct: 1288 VGQPGLVGEKGEDGEAGDPGPVGEPGIPGAKGNVGEKGDAGAPGAAGPPGPRGVPGEDGP 1347

Query: 139  KGA------PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ-------------------- 172
            KG       PG +GPPG  G+ G +G  GPKGD G PG                      
Sbjct: 1348 KGNLGPIGFPGDLGPPGEPGVNGADGAPGPKGDNGEPGKAGPTGASGEPGPPGPPGRRGH 1407

Query: 173  -GIPGDEGKRGPKGD---------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G  G EGK+G KG          MG PG +G  G+ G PG  GL GIPG  G  G+
Sbjct: 1408 VGAAGKEGKQGMKGAKGATGNLGPMGKPGPVGPQGQPGRPGPEGLRGIPGPAGEHGL 1464



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 62/152 (40%), Gaps = 42/152 (27%)

Query: 151  QGIPGDEGKRGPKGD------MGYPGPQGIPGDEGKR----------------------- 181
            QG+PG  GK G KGD       G  GP G+ G  G R                       
Sbjct: 1039 QGLPGTAGKEGAKGDPGPLGASGKSGPPGLKGFRGTRGTPGAVGPAGLKGGEGLPGVAGA 1098

Query: 182  ----------GPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                      GP G +G PGR   +G  G  G  GEPG  G  G  G DG PG  GLPG 
Sbjct: 1099 AGATGERGPAGPAGAIGQPGRPGSVGPAGPMGEKGEPGEKGTTGLAGRDGEPGPAGLPGI 1158

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G +G+KG TG  G +G  G  G  G
Sbjct: 1159 AGPQGPPGEDGDKGETGGPGQKGSKGDKGEAG 1190



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 61/125 (48%), Gaps = 12/125 (9%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---------QGIPGDEGKRGPKGD 186
           +G  G  G+ G PGP G+PG  G +G +G+ G PGP          G PG  G  G  G 
Sbjct: 571 KGPPGPLGLTGRPGPLGVPGTSGLKGDRGNDGPPGPRGLPGTPGIHGKPGKRGHAGVDGG 630

Query: 187 MGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G PG  G  G    DGLPG PG  G  G +G  G  G  G PG+ G  G  G  G+ G 
Sbjct: 631 RGAPGEAGSKGDRGFDGLPGLPGDKGHRGGSGKPGPAGPAGEPGEKGPQGPLGPRGQPGE 690

Query: 244 TGPRG 248
            GPRG
Sbjct: 691 PGPRG 695



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 84/208 (40%), Gaps = 58/208 (27%)

Query: 111 PPGLQGP---------IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------ 149
           PPGL GP         +G  G  G  G+MG  G  G  G  G+ GPPG            
Sbjct: 485 PPGLLGPDGLPGPAGPVGPPGPRGDPGDMGPPGRPGLAGVDGIPGPPGTLLMIPFKYSAG 544

Query: 150 ---------PQGIPGD----------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---- 186
                    PQ               +G  GP G  G PGP G+PG  G +G +G+    
Sbjct: 545 DSQNGPVMSPQEAQAQAILQQSRLSLKGPPGPLGLTGRPGPLGVPGTSGLKGDRGNDGPP 604

Query: 187 -----------MGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                       G PG+    G+DG  G PGE G  G  G +G+ G+PG  G  G  G P
Sbjct: 605 GPRGLPGTPGIHGKPGKRGHAGVDGGRGAPGEAGSKGDRGFDGLPGLPGDKGHRGGSGKP 664

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  GE G  GP+G  G  G  G PG
Sbjct: 665 GPAGPAGEPGEKGPQGPLGPRGQPGEPG 692



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 82/198 (41%), Gaps = 57/198 (28%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGE------RGEKGAPGVVGPPGPQ---------- 151
            E  P G  GPIG  G++G  GE GV G       +G+ G PG  GP G            
Sbjct: 1344 EDGPKGNLGPIGFPGDLGPPGEPGVNGADGAPGPKGDNGEPGKAGPTGASGEPGPPGPPG 1403

Query: 152  -----GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
                 G  G EGK+G KG  G  G  G  G  G  GP+G  G PG  GL G  G  GE G
Sbjct: 1404 RRGHVGAAGKEGKQGMKGAKGATGNLGPMGKPGPVGPQGQPGRPGPEGLRGIPGPAGEHG 1463

Query: 207  LD---------------------GIPGRNG---------MDGIPGKDGLPGKDGIPGTNG 236
            L+                     G PGR G         + G PG+ G  G  G+PG   
Sbjct: 1464 LNGPPGQIGPPGPIGPPGLPGFKGDPGRVGDKGHGGLIGLIGPPGEPGEKGDRGLPGI-- 1521

Query: 237  TNGEKGMTGPRGNRGKSG 254
                +G+ GP+G+ G +G
Sbjct: 1522 ----QGLQGPKGDEGMAG 1535



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 85/209 (40%), Gaps = 60/209 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGVVGPPGPQGIPGDEGK 159
            PG +G  GQ G  G+ GE G +G +G  G              G+ G PG +G PG +GK
Sbjct: 943  PGEKGSAGQDGPPGSPGEQGPQGPQGRNGETGPKGPNGPPGKDGLPGHPGQRGEPGFQGK 1002

Query: 160  R------------------GPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGL 195
                               GP GD G+PG       QG+PG  GK G KGD G  G  G 
Sbjct: 1003 NGPPGPPGVVGPQGKSGEIGPTGDRGHPGSPGPPGEQGLPGTAGKEGAKGDPGPLGASGK 1062

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
             G  GL G  G  G PG  G  G+ G +                        G PG+ G 
Sbjct: 1063 SGPPGLKGFRGTRGTPGAVGPAGLKGGEGLPGVAGAAGATGERGPAGPAGAIGQPGRPGS 1122

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GEKG  G +G  G +G +G PG
Sbjct: 1123 VGPAGPMGEKGEPGEKGTTGLAGRDGEPG 1151



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 79/202 (39%), Gaps = 63/202 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--------------------------- 144
            PG QG  G  G +GA G +G KG RG  G PG                            
Sbjct: 889  PGRQGAKGSLGFLGAPGVLGEKGRRGPAGQPGSGGQRGPNGARGGRGARGPTGKPGEKGS 948

Query: 145  VGPPGPQGIPGDEGKRGPKGD------------------MGYPGPQGIPGDEGKR----- 181
             G  GP G PG++G +GP+G                    G+PG +G PG +GK      
Sbjct: 949  AGQDGPPGSPGEQGPQGPQGRNGETGPKGPNGPPGKDGLPGHPGQRGEPGFQGKNGPPGP 1008

Query: 182  -------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                         GP GD G+PG  G  G  GLPG  G +G  G  G  G  GK G PG 
Sbjct: 1009 PGVVGPQGKSGEIGPTGDRGHPGSPGPPGEQGLPGTAGKEGAKGDPGPLGASGKSGPPGL 1068

Query: 229  DGIPGTNGTNGEKGMTGPRGNR 250
             G  GT GT G  G  G +G  
Sbjct: 1069 KGFRGTRGTPGAVGPAGLKGGE 1090



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 78/161 (48%), Gaps = 30/161 (18%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            +GA G+ G +G +G KGA G +GP   PGP G  G  G+ GP+G  G PGP G  G  G 
Sbjct: 1408 VGAAGKEGKQGMKGAKGATGNLGPMGKPGPVGPQGQPGRPGPEGLRGIPGPAGEHGLNGP 1467

Query: 181  RGP---------------KGDMGYPGRIG---------LDGRDGLPGEPGLDGIPGRNGM 216
             G                KGD   PGR+G         L G  G PGE G  G+PG  G+
Sbjct: 1468 PGQIGPPGPIGPPGLPGFKGD---PGRVGDKGHGGLIGLIGPPGEPGEKGDRGLPGIQGL 1524

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G +G+ G  G  G  G  G  G  G +G++G+ G+ G
Sbjct: 1525 QGPKGDEGMAGSHGPTGPPGLPGFSGAAGEKGSKGEPGVIG 1565


>gi|449679146|ref|XP_002161962.2| PREDICTED: collagen alpha-1(XXIV) chain-like, partial [Hydra
           magnipapillata]
          Length = 1347

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/185 (42%), Positives = 97/185 (52%), Gaps = 24/185 (12%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGD 156
           QG      E   PGLQG IG  G+ G +G++G  G RGE GAPGV GP   PG  G PG 
Sbjct: 309 QGSIGPKGEVGDPGLQGAIGPSGKQGLEGKVGPTGPRGEVGAPGVQGPQGQPGVPGFPGQ 368

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------MGYPGRIGLDGR--------- 198
           EG +G  G+ G  GP+G  G++G +G  GD          G PG  G DG+         
Sbjct: 369 EGAKGNLGETGLTGPEGNKGEKGFKGSAGDRGLTGEPGTAGQPGATGRDGKTGPSGLHGK 428

Query: 199 ---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
               GLPG PG+ G+ G  G+ G+PG+ G  G  G PG  G  G +G TG  G +G SG 
Sbjct: 429 NGDTGLPGLPGMQGVAGSTGVVGMPGEMGDNGDLGAPGLQGPKGVQGATGATGEKGVSGP 488

Query: 256 NGVPG 260
            GVPG
Sbjct: 489 IGVPG 493



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 96/185 (51%), Gaps = 18/185 (9%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            V  QG      E  PPGLQG  G+ G+IG+KG  G+ G+ G      + G PG +G PG
Sbjct: 815 FVGTQGAVGMRGEQGPPGLQGRNGRPGQIGSKGFPGLNGKDG------LNGKPGDKGFPG 868

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGL-- 207
            +G RG +G  G  G  G+PG +G +G  G MGYPG       +G  G  G PGEPG+  
Sbjct: 869 TDGMRGLQGIQGKDGTDGLPGKDGGKGEIGPMGYPGSQGVQGPMGEQGDIGEPGEPGILG 928

Query: 208 ----DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                G  G+ G  G  GK G  G+ G+PG +G  GE G  G RG++G +G  G+ G P 
Sbjct: 929 QDGPKGSAGQQGNRGEDGKQGDKGESGVPGESGKQGEAGEAGERGSKGLTGNTGISGPPG 988

Query: 264 ICAYK 268
               K
Sbjct: 989 DEGEK 993



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 84/148 (56%), Gaps = 6/148 (4%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GP+G  G  G +G MG +G+ GE G PG++G  GP+G  G +G RG  G  G  G  G+P
Sbjct: 898  GPMGYPGSQGVQGPMGEQGDIGEPGEPGILGQDGPKGSAGQQGNRGEDGKQGDKGESGVP 957

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP------GKDGLPGKD 229
            G+ GK+G  G+ G  G  GL G  G+ G PG +G  G +G  G+P      G  G  G D
Sbjct: 958  GESGKQGEAGEAGERGSKGLTGNTGISGPPGDEGEKGDDGEQGLPGPIGPQGPRGSIGPD 1017

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G NG+ G+ G  GP G+RG+ GI G
Sbjct: 1018 GPVGRNGSKGDVGHPGPAGSRGEPGIRG 1045



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 99/197 (50%), Gaps = 28/197 (14%)

Query: 89  NAYSRIP-LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
           N  + +P L  MQG   ST      G+ G +G  G++GA G  G KG +G  GA G  G 
Sbjct: 429 NGDTGLPGLPGMQGVAGSTGVV---GMPGEMGDNGDLGAPGLQGPKGVQGATGATGEKGV 485

Query: 148 PGPQGIP---GDEGKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGY 189
            GP G+P   GD G  GP+G  G  GP G P               G++GK GP G+ GY
Sbjct: 486 SGPIGVPGRRGDTGAEGPQGSTGIQGPPGQPGAAGTDGKDGNPGDKGEQGKPGPTGNRGY 545

Query: 190 P---GRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           P   G+IG  G  GL    GE G  G PG +G  G+ G  G  G  G+PG  G  G KG 
Sbjct: 546 PGIAGKIGATGTTGLQGPRGETGAPGAPGSSGDIGLVGPKGSSGNVGLPGMRGKQGSKGN 605

Query: 244 TGPRGNRGKSGINGVPG 260
           TG +G++GK G+ G  G
Sbjct: 606 TGSKGSQGKQGLKGAAG 622



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 95/185 (51%), Gaps = 18/185 (9%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGD 156
           QG      E  P G  G +G+ G  G  G  G+ G+ G  G PG     GPPG  G  G+
Sbjct: 744 QGLQGPNGEVGPVGQPGLVGRDGNAGQPGPRGIDGDPGNPGNPGASGDQGPPGHDGKDGE 803

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRI------GLDGRDGLPGEPGL 207
            GK G +GD G+ G QG  G  G++GP   +G  G PG+I      GL+G+DGL G+PG 
Sbjct: 804 RGKPGKEGDKGFVGTQGAVGMRGEQGPPGLQGRNGRPGQIGSKGFPGLNGKDGLNGKPGD 863

Query: 208 DGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG +GM G+       G DGLPGKDG  G  G  G  G  G +G  G+ G  G PG 
Sbjct: 864 KGFPGTDGMRGLQGIQGKDGTDGLPGKDGGKGEIGPMGYPGSQGVQGPMGEQGDIGEPGE 923

Query: 262 PAICA 266
           P I  
Sbjct: 924 PGILG 928



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 93/179 (51%), Gaps = 12/179 (6%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQ 151
            + G   S  +  P GL+G  G +G  G+KG+ G +GERG KG  G  GP      PGP+
Sbjct: 190 GLDGARGSKGDDGPVGLKGSPGIRGAQGSKGQSGEQGERGAKGINGDAGPVGEDGSPGPK 249

Query: 152 GIPGDEGK---RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  GD+GK    G KG +G  GPQG+PG +G+ G +G  G  G IG  G+ G  G+ G  
Sbjct: 250 GFDGDQGKPGTPGAKGAIGDVGPQGLPGPQGQIGERGSQGIQGEIGTVGKRGDTGQQGPQ 309

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           G  G  G  G P   GL G  G  G  G  G+ G TGPRG  G  G+ G  G P +  +
Sbjct: 310 GSIGPKGEVGDP---GLQGAIGPSGKQGLEGKVGPTGPRGEVGAPGVQGPQGQPGVPGF 365



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 96/195 (49%), Gaps = 19/195 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
           PG  GP+G+ G  G  G +G  G +G  G  G+ GP GPQG+ G  G+ GP         
Sbjct: 705 PGESGPVGEDGAQGTAGALGESGSKGGTGEIGLPGPTGPQGLQGPNGEVGPVGQPGLVGR 764

Query: 163 KGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G+ G PGP+GI   PG+ G  G  GD G PG  G DG  G PG+ G  G  G  G  G+
Sbjct: 765 DGNAGQPGPRGIDGDPGNPGNPGASGDQGPPGHDGKDGERGKPGKEGDKGFVGTQGAVGM 824

Query: 220 PGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK----RESC 272
            G+ G P   G++G PG  G+ G  G+ G  G  GK G  G PGT  +   +    ++  
Sbjct: 825 RGEQGPPGLQGRNGRPGQIGSKGFPGLNGKDGLNGKPGDKGFPGTDGMRGLQGIQGKDGT 884

Query: 273 SLLPNSETSQLLIPP 287
             LP  +  +  I P
Sbjct: 885 DGLPGKDGGKGEIGP 899



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 97/204 (47%), Gaps = 20/204 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYP 169
           GL GP G +G  G  GE+G  G+ G  G  G  G PGP+GI   PG+ G  G  GD G P
Sbjct: 736 GLPGPTGPQGLQGPNGEVGPVGQPGLVGRDGNAGQPGPRGIDGDPGNPGNPGASGDQGPP 795

Query: 170 GPQGIPGDEGKRGPKGDMGY------------PGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G  G+ GK G +GD G+             G  GL GR+G PG+ G  G PG NG D
Sbjct: 796 GHDGKDGERGKPGKEGDKGFVGTQGAVGMRGEQGPPGLQGRNGRPGQIGSKGFPGLNGKD 855

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G+ GK   PG  G PGT+G  G +G+ G  G  G  G +G  G      Y        P 
Sbjct: 856 GLNGK---PGDKGFPGTDGMRGLQGIQGKDGTDGLPGKDGGKGEIGPMGYPGSQGVQGPM 912

Query: 278 SETSQLLIP--PTIVGSEHIFSSS 299
            E   +  P  P I+G +    S+
Sbjct: 913 GEQGDIGEPGEPGILGQDGPKGSA 936



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 100/211 (47%), Gaps = 42/211 (19%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPG------ 143
           +V M G      +   PGLQGP G +G  GA GE      +GV G RG+ GA G      
Sbjct: 449 VVGMPGEMGDNGDLGAPGLQGPKGVQGATGATGEKGVSGPIGVPGRRGDTGAEGPQGSTG 508

Query: 144 VVGPPGPQGI---------PGDEGKR---GPKGDMGYPGPQ---GIPGDEGKRGPKGDMG 188
           + GPPG  G          PGD+G++   GP G+ GYPG     G  G  G +GP+G+ G
Sbjct: 509 IQGPPGQPGAAGTDGKDGNPGDKGEQGKPGPTGNRGYPGIAGKIGATGTTGLQGPRGETG 568

Query: 189 YPGR------IGL------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPG 233
            PG       IGL       G  GLPG  G  G  G  G  G  GK GL    GKDG  G
Sbjct: 569 APGAPGSSGDIGLVGPKGSSGNVGLPGMRGKQGSKGNTGSKGSQGKQGLKGAAGKDGAVG 628

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G +G  G  GP G RG+ G +G PG P +
Sbjct: 629 EMGPSGITGPPGPLGKRGEPGEDGAPGLPGL 659



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 90/165 (54%), Gaps = 12/165 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGP------PGPQGIPGDEGKRGP 162
           PG QG IG++G  G +GE+G  G+RG   ++G  G +GP      PG QG  G  GK+G 
Sbjct: 276 PGPQGQIGERGSQGIQGEIGTVGKRGDTGQQGPQGSIGPKGEVGDPGLQGAIGPSGKQGL 335

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGI 219
           +G +G  GP+G  G  G +GP+G  G PG  G +G  G  GE GL   +G  G  G  G 
Sbjct: 336 EGKVGPTGPRGEVGAPGVQGPQGQPGVPGFPGQEGAKGNLGETGLTGPEGNKGEKGFKGS 395

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  GL G+ G  G  G  G  G TGP G  GK+G  G+PG P +
Sbjct: 396 AGDRGLTGEPGTAGQPGATGRDGKTGPSGLHGKNGDTGLPGLPGM 440



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 87/175 (49%), Gaps = 16/175 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+QG  G  G +G  GEMG   + G+ GAPG+ GP G QG  G  G++G  G +G PG 
Sbjct: 438 PGMQGVAGSTGVVGMPGEMG---DNGDLGAPGLQGPKGVQGATGATGEKGVSGPIGVPGR 494

Query: 172 QGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           +G  G EG +G    +G  G PG  G DG+DG PG+ G  G PG  G  G P        
Sbjct: 495 RGDTGAEGPQGSTGIQGPPGQPGAAGTDGKDGNPGDKGEQGKPGPTGNRGYP-------- 546

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL-LPNSETSQ 282
            GI G  G  G  G+ GPRG  G  G  G  G   +   K  S ++ LP     Q
Sbjct: 547 -GIAGKIGATGTTGLQGPRGETGAPGAPGSSGDIGLVGPKGSSGNVGLPGMRGKQ 600



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 111/227 (48%), Gaps = 10/227 (4%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +GF     +   PG +G IG   ++G +G  G +G+ GE+G+ G+ G  G  G  GD G+
Sbjct: 249 KGFDGDQGKPGTPGAKGAIG---DVGPQGLPGPQGQIGERGSQGIQGEIGTVGKRGDTGQ 305

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +GP+G +G  G  G PG +G  GP G  G  G++G  G  G  G PG+ G  G+ G+ G 
Sbjct: 306 QGPQGSIGPKGEVGDPGLQGAIGPSGKQGLEGKVGPTGPRGEVGAPGVQGPQGQPGVPGF 365

Query: 220 PGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           PG++G     G+ G+ G  G  GEKG  G  G+RG +G  G  G P       ++     
Sbjct: 366 PGQEGAKGNLGETGLTGPEGNKGEKGFKGSAGDRGLTGEPGTAGQPGATGRDGKTGPSGL 425

Query: 277 NSETSQLLIPPTIVGSEHIFSSSPIV---VREGDNVRLRCVATGHPK 320
           + +     + P + G + +  S+ +V      GDN  L       PK
Sbjct: 426 HGKNGDTGL-PGLPGMQGVAGSTGVVGMPGEMGDNGDLGAPGLQGPK 471



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 12/160 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            G+QGP+G++G+IG  GE G+          G++G +G  G  G  G  G+PG+ GK+G  
Sbjct: 907  GVQGPMGEQGDIGEPGEPGILGQDGPKGSAGQQGNRGEDGKQGDKGESGVPGESGKQGEA 966

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G+ G  G +G+ G+ G  GP GD    G  G DG  GLPG  G  G  G  G DG  G++
Sbjct: 967  GEAGERGSKGLTGNTGISGPPGDE---GEKGDDGEQGLPGPIGPQGPRGSIGPDGPVGRN 1023

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G PG  G+ GE G+ G  GN G+ G+ G  G P 
Sbjct: 1024 GSKGDVGHPGPAGSRGEPGIRGDVGNAGQPGLVGSEGPPG 1063



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 78/153 (50%), Gaps = 6/153 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G  G +G +GE G  G  GE GA G  G        G+ G +G  G++G PGP
Sbjct: 687 PGEPGPRGPTGPVGDRGEPGESGPVGEDGAQGTAG------ALGESGSKGGTGEIGLPGP 740

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G  G +G  G  G +G PG +G DG  G PG  G+DG PG  G  G  G  G PG DG 
Sbjct: 741 TGPQGLQGPNGEVGPVGQPGLVGRDGNAGQPGPRGIDGDPGNPGNPGASGDQGPPGHDGK 800

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G++G  G  G +G  G+ G  G P +
Sbjct: 801 DGERGKPGKEGDKGFVGTQGAVGMRGEQGPPGL 833



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 85/158 (53%), Gaps = 12/158 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL G  G +GE G  G  G+KG RGE   KG PG  G  G QGI G++G  G KG+ G 
Sbjct: 78  PGLLGEYGPRGEPGDPGVDGLKGARGEPGIKGNPGKGGNIGHQGIQGNQGPFGFKGEEGS 137

Query: 169 PGPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI--- 219
            G QG  GD+G+      +G KGD G  G +G  G+ G+ G  G  G  G  G+DG    
Sbjct: 138 KGLQGDEGDQGRTGEKGYKGDKGDQGEQGEMGFQGQMGIVGPDGPTGPVGPRGLDGARGS 197

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G DG  G  G PG  G  G KG +G +G RG  GING
Sbjct: 198 KGDDGPVGLKGSPGIRGAQGSKGQSGEQGERGAKGING 235



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 90/177 (50%), Gaps = 18/177 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G  G+ G +G+ G +G++G  G  G VG  G QG PG +G+ G  G +G  G  
Sbjct: 790 GDQGPPGHDGKDGERGKPGKEGDKGFVGTQGAVGMRGEQGPPGLQGRNGRPGQIGSKGFP 849

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI- 231
           G+ G +G  G  GD G+PG  G+ G  G+ G+ G DG+PG++G  G  G  G PG  G+ 
Sbjct: 850 GLNGKDGLNGKPGDKGFPGTDGMRGLQGIQGKDGTDGLPGKDGGKGEIGPMGYPGSQGVQ 909

Query: 232 --------------PGTNGTNGEKGMTGPRGNR---GKSGINGVPGTPAICAYKRES 271
                         PG  G +G KG  G +GNR   GK G  G  G P     + E+
Sbjct: 910 GPMGEQGDIGEPGEPGILGQDGPKGSAGQQGNRGEDGKQGDKGESGVPGESGKQGEA 966



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 79/152 (51%), Gaps = 3/152 (1%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYP 169
           G QG  G+KG  G KG+ G +GE G +G  G+VGP GP G  G    +G RG KGD G  
Sbjct: 145 GDQGRTGEKGYKGDKGDQGEQGEMGFQGQMGIVGPDGPTGPVGPRGLDGARGSKGDDGPV 204

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G +G PG  G +G KG  G  G  G  G +G  G  G DG PG  G DG  GK G PG  
Sbjct: 205 GLKGSPGIRGAQGSKGQSGEQGERGAKGINGDAGPVGEDGSPGPKGFDGDQGKPGTPGAK 264

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G  G  G  G  G RG  GI G  GT
Sbjct: 265 GAIGDVGPQGLPGPQGQIGERGSQGIQGEIGT 296



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 92/190 (48%), Gaps = 13/190 (6%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            GLQG  G+ G  G  G+ G KGE G  G PG  G  GP G  GD G+ G  G +G  GP 
Sbjct: 874  GLQGIQGKDGTDGLPGKDGGKGEIGPMGYPGSQGVQGPMGEQGDIGEPGEPGILGQDGPK 933

Query: 172  -----QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                 QG  G++GK+G KG+ G PG  G  G  G  GE G  G+ G  G+ G PG +G  
Sbjct: 934  GSAGQQGNRGEDGKQGDKGESGVPGESGKQGEAGEAGERGSKGLTGNTGISGPPGDEGEK 993

Query: 227  GKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
            G D   G+PG  G  G +G  GP G  G++G  G  G P     + E           Q 
Sbjct: 994  GDDGEQGLPGPIGPQGPRGSIGPDGPVGRNGSKGDVGHPGPAGSRGEPGIRGDVGNAGQ- 1052

Query: 284  LIPPTIVGSE 293
               P +VGSE
Sbjct: 1053 ---PGLVGSE 1059



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 94/198 (47%), Gaps = 13/198 (6%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG- 158
           +GF  S  +    G  G  GQ G  G  G+ G  G  G+ G  G+ G PG QG+ G  G 
Sbjct: 390 KGFKGSAGDRGLTGEPGTAGQPGATGRDGKTGPSGLHGKNGDTGLPGLPGMQGVAGSTGV 449

Query: 159 -----KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                + G  GD+G PG QG  G +G  G  G+ G  G IG+ GR    G+ G +G  G 
Sbjct: 450 VGMPGEMGDNGDLGAPGLQGPKGVQGATGATGEKGVSGPIGVPGRR---GDTGAEGPQGS 506

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRE 270
            G+ G PG+ G  G DG  G  G  GE+G  GP GNRG  GI    G  GT  +   + E
Sbjct: 507 TGIQGPPGQPGAAGTDGKDGNPGDKGEQGKPGPTGNRGYPGIAGKIGATGTTGLQGPRGE 566

Query: 271 SCS-LLPNSETSQLLIPP 287
           + +   P S     L+ P
Sbjct: 567 TGAPGAPGSSGDIGLVGP 584



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 68/122 (55%), Gaps = 6/122 (4%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+IGA G  G++G RGE GAPG    PG  G  G  G +G  G++G PG +G  G +G  
Sbjct: 550 GKIGATGTTGLQGPRGETGAPGA---PGSSGDIGLVGPKGSSGNVGLPGMRGKQGSKGNT 606

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGI---PGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G KG  G  G  G  G+DG  GE G  GI   PG  G  G PG+DG PG  G+ G  G +
Sbjct: 607 GSKGSQGKQGLKGAAGKDGAVGEMGPSGITGPPGPLGKRGEPGEDGAPGLPGLDGAQGPH 666

Query: 239 GE 240
           GE
Sbjct: 667 GE 668



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 76/154 (49%), Gaps = 6/154 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G KGE G KG  G +G  GE G  G  G  G  G  G  G  G  GD G P   
Sbjct: 379 GLTGPEGNKGEKGFKGSAGDRGLTGEPGTAGQPGATGRDGKTGPSGLHGKNGDTGLP--- 435

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G+PG +G  G  G +G PG +G +G  G P   G  G+ G  G  G  G+ G  G+PG+ 
Sbjct: 436 GLPGMQGVAGSTGVVGMPGEMGDNGDLGAPGLQGPKGVQGATGATGEKGVSGPIGVPGRR 495

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G  G+ GP G  G +G +G  G P 
Sbjct: 496 GDTGAEGPQGSTGIQGPPGQPGAAGTDGKDGNPG 529



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 92/206 (44%), Gaps = 36/206 (17%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
             +QG    T     PG  G IG  G  G+ G +G+ G RG++G+ G  G  G QG  G 
Sbjct: 558 TGLQGPRGETGAPGAPGSSGDIGLVGPKGSSGNVGLPGMRGKQGSKGNTGSKGSQGKQGL 617

Query: 157 EGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDG------------- 200
           +G  G  G +G  GP GI   PG  GKRG  G+ G PG  GLDG  G             
Sbjct: 618 KGAAGKDGAVGEMGPSGITGPPGPLGKRGEPGEDGAPGLPGLDGAQGPHGEDGQPGQPGQ 677

Query: 201 --------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM--------- 243
                   LPGEPG  G  G  G  G PG+ G  G+DG  GT G  GE G          
Sbjct: 678 PGVQGLRGLPGEPGPRGPTGPVGDRGEPGESGPVGEDGAQGTAGALGESGSKGGTGEIGL 737

Query: 244 ---TGPRGNRGKSGINGVPGTPAICA 266
              TGP+G +G +G  G  G P +  
Sbjct: 738 PGPTGPQGLQGPNGEVGPVGQPGLVG 763



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G KGE G+KG  G +G++G  G          +G  GD+G +G +G+MG+ G  
Sbjct: 124 GNQGPFGFKGEEGSKGLQGDEGDQGRTGE---------KGYKGDKGDQGEQGEMGFQGQM 174

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           GI G +G  GP G  G  G  G  G DG  G  G  GI G  G  G  G+ G  G  GI 
Sbjct: 175 GIVGPDGPTGPVGPRGLDGARGSKGDDGPVGLKGSPGIRGAQGSKGQSGEQGERGAKGIN 234

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  GE G  GP+G  G  G  G PG 
Sbjct: 235 GDAGPVGEDGSPGPKGFDGDQGKPGTPGA 263



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 93/209 (44%), Gaps = 45/209 (21%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI--- 153
           + + G   S+     PG++G  G KG  G+KG  G +G +G  G  G VG  GP GI   
Sbjct: 579 IGLVGPKGSSGNVGLPGMRGKQGSKGNTGSKGSQGKQGLKGAAGKDGAVGEMGPSGITGP 638

Query: 154 PGDEGKRGPKGDMGYPG---------P------------------QGIPGDEGKRGPK-- 184
           PG  GKRG  G+ G PG         P                  +G+PG+ G RGP   
Sbjct: 639 PGPLGKRGEPGEDGAPGLPGLDGAQGPHGEDGQPGQPGQPGVQGLRGLPGEPGPRGPTGP 698

Query: 185 -GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE--- 240
            GD G PG  G  G DG     G  G  G +G  G  G+ GLPG  G  G  G NGE   
Sbjct: 699 VGDRGEPGESGPVGEDGA---QGTAGALGESGSKGGTGEIGLPGPTGPQGLQGPNGEVGP 755

Query: 241 ---KGMTGPRGNRGK---SGINGVPGTPA 263
               G+ G  GN G+    GI+G PG P 
Sbjct: 756 VGQPGLVGRDGNAGQPGPRGIDGDPGNPG 784



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 89/201 (44%), Gaps = 36/201 (17%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPG 143
           +   QG   +T      G QG  G  G+ GA GEMG             +GE GE GAPG
Sbjct: 596 MRGKQGSKGNTGSKGSQGKQGLKGAAGKDGAVGEMGPSGITGPPGPLGKRGEPGEDGAPG 655

Query: 144 VVGPPGPQG---------------------IPGDEGKRGPKG---DMGYPGPQGIPGDEG 179
           + G  G QG                     +PG+ G RGP G   D G PG  G  G++G
Sbjct: 656 LPGLDGAQGPHGEDGQPGQPGQPGVQGLRGLPGEPGPRGPTGPVGDRGEPGESGPVGEDG 715

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            +G  G +G  G  G  G  GLPG  G  G+ G NG  G  G+ GL G+DG  G  G  G
Sbjct: 716 AQGTAGALGESGSKGGTGEIGLPGPTGPQGLQGPNGEVGPVGQPGLVGRDGNAGQPGPRG 775

Query: 240 EKGMTGPRGNRGKSGINGVPG 260
             G  G  GN G SG  G PG
Sbjct: 776 IDGDPGNPGNPGASGDQGPPG 796



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 65/125 (52%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           RG  G PG  GP GP G  G+ G+ GP G+ G  G  G  G+ G +G  G++G PG  G 
Sbjct: 684 RGLPGEPGPRGPTGPVGDRGEPGESGPVGEDGAQGTAGALGESGSKGGTGEIGLPGPTGP 743

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  GE G  G PG  G DG  G+ G  G DG PG  G  G  G  GP G+ GK G 
Sbjct: 744 QGLQGPNGEVGPVGQPGLVGRDGNAGQPGPRGIDGDPGNPGNPGASGDQGPPGHDGKDGE 803

Query: 256 NGVPG 260
            G PG
Sbjct: 804 RGKPG 808



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 15/107 (14%)

Query: 113  GLQGPIGQKGEIGAKG------------EMGVKGERGEKGAPGVVGPPGPQGIPGDEG-- 158
            G QG  G+ GE G+KG            + G KG+ GE+G PG +GP GP+G  G +G  
Sbjct: 961  GKQGEAGEAGERGSKGLTGNTGISGPPGDEGEKGDDGEQGLPGPIGPQGPRGSIGPDGPV 1020

Query: 159  -KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             + G KGD+G+PGP G  G+ G RG  G+ G PG +G +G  G  GE
Sbjct: 1021 GRNGSKGDVGHPGPAGSRGEPGIRGDVGNAGQPGLVGSEGPPGPQGE 1067



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 68/135 (50%), Gaps = 21/135 (15%)

Query: 111  PPGLQGPIGQKGEIGA---KGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDEG 158
            P G  G  G +GE G    KGE GV          GE GE+G+ G+ G  G  G PGDEG
Sbjct: 932  PKGSAGQQGNRGEDGKQGDKGESGVPGESGKQGEAGEAGERGSKGLTGNTGISGPPGDEG 991

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDGRDGLPGEPGLDG 209
            ++G  G+ G PGP G  G  G  GP         KGD+G+PG  G  G  G+ G+ G  G
Sbjct: 992  EKGDDGEQGLPGPIGPQGPRGSIGPDGPVGRNGSKGDVGHPGPAGSRGEPGIRGDVGNAG 1051

Query: 210  IPGRNGMDGIPGKDG 224
             PG  G +G PG  G
Sbjct: 1052 QPGLVGSEGPPGPQG 1066



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 66/115 (57%), Gaps = 9/115 (7%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           GP GPQG  G+ G+ GPKG+ G  G +G+   PG  G+ GP+G+   PG  G+DG  G  
Sbjct: 46  GPEGPQGQTGNIGEAGPKGNQGLVGLKGVIGLPGLLGEYGPRGE---PGDPGVDGLKGAR 102

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GEPG+ G PG+ G     G  G+ G  G  G  G  G KG+ G  G++G++G  G
Sbjct: 103 GEPGIKGNPGKGGNI---GHQGIQGNQGPFGFKGEEGSKGLQGDEGDQGRTGEKG 154


>gi|195386312|ref|XP_002051848.1| GJ17223 [Drosophila virilis]
 gi|194148305|gb|EDW64003.1| GJ17223 [Drosophila virilis]
          Length = 1778

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/182 (42%), Positives = 97/182 (53%), Gaps = 32/182 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PG +GP+G  G  G KG+ G +G  G  G PG  GP GP GI G +G  GP         
Sbjct: 978  PGKRGPLGAAGIPGMKGDKGARGLTGNDGLPGARGPTGPPGIMGVKGDIGPRGLPGQDGL 1037

Query: 163  ------KGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------- 206
                  KG+ G PG   PQG PGD  ++G KG+   PG  GL G+DGLPG PG       
Sbjct: 1038 HGLAGEKGNQGLPGFDGPQGEPGDASEKGQKGE---PGVSGLRGQDGLPGAPGQPGEKGL 1094

Query: 207  ----LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                + G PG  G  G  G+DG+ G+DG+PG  G  G  G  GP+G++G SG  G PGTP
Sbjct: 1095 PGIAVHGRPGPQGEKGDTGRDGIYGQDGMPGEKGEPGFPGAPGPKGDKGNSGQPGNPGTP 1154

Query: 263  AI 264
             +
Sbjct: 1155 GL 1156



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 88/163 (53%), Gaps = 24/163 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+KGE G  G  G KG++G  G PG  G PG  G+PG +G  GP   +GYPGP+GI GD 
Sbjct: 1125 GEKGEPGFPGAPGPKGDKGNSGQPGNPGTPGLDGLPGPQGNPGP---IGYPGPKGIKGD- 1180

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---------IPGKDGLPGKD 229
              RGP G  G  G +GL GR G  G  GL G  G  G+ G         + G+ GLPGK 
Sbjct: 1181 --RGPAGANGLKGAMGLAGRQGYQGATGLKGDKGEKGLRGPAAQVDMLALRGEKGLPGKH 1238

Query: 230  GIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPGTPA 263
            G+PG  G  G KG  GP         RG  G +GI G+PGTP 
Sbjct: 1239 GLPGLQGLKGNKGDQGPIGYPGEKGDRGLNGPAGIPGLPGTPG 1281



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 79/195 (40%), Positives = 99/195 (50%), Gaps = 32/195 (16%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L   QG+  +T      GL+G  G+KG  G   ++ +   RGEKG PG  G PG QG+ G
Sbjct: 1195 LAGRQGYQGAT------GLKGDKGEKGLRGPAAQVDMLALRGEKGLPGKHGLPGLQGLKG 1248

Query: 156  DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDM-----------------GYPGR 192
            ++G +GP      KGD G  GP GIPG  G  GPKGDM                 G PGR
Sbjct: 1249 NKGDQGPIGYPGEKGDRGLNGPAGIPGLPGTPGPKGDMGLHGEPGYPGPVVKGEKGLPGR 1308

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G +GR+G PG PG+    G  G+ G+PG  GL G  G  G  G  GE+G+TG  G  G 
Sbjct: 1309 AGKNGREGAPGLPGMK---GERGLAGLPGNAGLVGLPGPIGPMGPKGERGLTGAPGIDGS 1365

Query: 253  SGINGVPGTPAICAY 267
            +G+NG  G      Y
Sbjct: 1366 AGLNGAAGIKGESGY 1380



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 87/165 (52%), Gaps = 8/165 (4%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
             + G          PG  GP G+ G   E G KGE GV G RG+ G PG  G PG +G+P
Sbjct: 1036 GLHGLAGEKGNQGLPGFDGPQGEPGDASEKGQKGEPGVSGLRGQDGLPGAPGQPGEKGLP 1095

Query: 155  G--DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            G    G+ GP+G+ G  G  GI G +G  G KG+ G+PG  G  G  G  G+PG  G P 
Sbjct: 1096 GIAVHGRPGPQGEKGDTGRDGIYGQDGMPGEKGEPGFPGAPGPKGDKGNSGQPGNPGTP- 1154

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G+DG+PG  G PG  G PG  G  G++G  G  G +G  G+ G
Sbjct: 1155 --GLDGLPGPQGNPGPIGYPGPKGIKGDRGPAGANGLKGAMGLAG 1197



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/155 (46%), Positives = 89/155 (57%), Gaps = 12/155 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAP---GVVGPPGPQGIPGDEGKRG----PK-- 163
            GL G  G+ G  GA G  G+KGERG  G P   G+VG PGP G  G +G+RG    P   
Sbjct: 1304 GLPGRAGKNGREGAPGLPGMKGERGLAGLPGNAGLVGLPGPIGPMGPKGERGLTGAPGID 1363

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G  G  G  GI G+ G  GPKGD G P   G +G+ G  G+ G+ G PG +G+ G+ G  
Sbjct: 1364 GSAGLNGAAGIKGESGYPGPKGDRGVP---GFEGQKGEKGDQGIAGPPGLSGLPGLKGDI 1420

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G PG DG PG  G  GEKG TGP+G  G+ G+ G+
Sbjct: 1421 GAPGMDGHPGPVGAPGEKGFTGPKGRDGRDGLPGL 1455



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 89/171 (52%), Gaps = 18/171 (10%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            +QG  G KGE+G+ G +G+ G +GE+GAPG  GP G  G  G  GKRGP G  G PG +G
Sbjct: 935  VQGRDGAKGEVGSPGLVGMPGNKGERGAPGNDGPKGFTGPVGAPGKRGPLGAAGIPGMKG 994

Query: 174  ------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                        +PG  G  GP G MG  G IG  G   LPG+ GL G+ G  G  G+PG
Sbjct: 995  DKGARGLTGNDGLPGARGPTGPPGIMGVKGDIGPRG---LPGQDGLHGLAGEKGNQGLPG 1051

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT---PAICAYKR 269
             DG  G+ G     G  GE G++G RG  G  G  G PG    P I  + R
Sbjct: 1052 FDGPQGEPGDASEKGQKGEPGVSGLRGQDGLPGAPGQPGEKGLPGIAVHGR 1102



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 116/247 (46%), Gaps = 58/247 (23%)

Query: 101 GFCNSTKEYCPPGLQGPIGQK---------GEIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
           G C+S    CPPGL+G  G++         G  G  GE G  GERG+ G  G +GPPG +
Sbjct: 570 GKCSS----CPPGLKGDKGERGLNGIPGNPGARGPPGERGYVGERGDDGIIGQMGPPGEK 625

Query: 152 ------GIPGDEGK---------------RGPKGDMGYPGPQGI------------PGDE 178
                 G PG  GK               +GPKG+ GYPG  G+            PG +
Sbjct: 626 GDDGYPGAPGATGKPGQSAFVDWSQIVPEKGPKGEPGYPGAAGVKGERGDSGIPGAPGLK 685

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G+ G KGD GY G+ G DG  G PG  G+DG PG++ + G PG+ G  G  G  GT+G  
Sbjct: 686 GEMGVKGDKGYMGQAGTDGSPGSPGRDGVDGFPGQS-IKGEPGRPGFDGYKGDKGTSGYV 744

Query: 239 GEKGMTGP----------RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPT 288
           G+KG  G           +GN+G+ G  G+PG P     ++    L     ++    PP 
Sbjct: 745 GQKGEPGTCAASELKVPLKGNKGERGATGMPG-PNGPMGQKGDIGLQGEKGSTGPQGPPG 803

Query: 289 IVGSEHI 295
           +VG   I
Sbjct: 804 LVGPRGI 810



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 95/189 (50%), Gaps = 33/189 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPKGD 165
            PG  GP+G KGE G  G  G+ G  G  GA G+ G      P G +G+PG EG++G KGD
Sbjct: 1342 PGPIGPMGPKGERGLTGAPGIDGSAGLNGAAGIKGESGYPGPKGDRGVPGFEGQKGEKGD 1401

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GK 222
             G  GP   PG  G  G KGD+G PG  G  G  G PGE G  G  GR+G DG+P   G+
Sbjct: 1402 QGIAGP---PGLSGLPGLKGDIGAPGMDGHPGPVGAPGEKGFTGPKGRDGRDGLPGLRGQ 1458

Query: 223  DGLPG---------------KDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGT 261
             G PG               +DG  G  G  GE+G+ G +G RG+       G+ G PG 
Sbjct: 1459 KGEPGLVPPPGPKGEPGHPGRDGQKGEPGPQGERGLIGIQGERGEKGERGLIGLTGPPGR 1518

Query: 262  PAICAYKRE 270
            P +   + E
Sbjct: 1519 PGLKGERGE 1527



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 98/206 (47%), Gaps = 38/206 (18%)

Query: 92   SRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
            +++ ++A++G      ++  PGLQG  G KG+ G  G  G KG+RG  G         P 
Sbjct: 1221 AQVDMLALRGEKGLPGKHGLPGLQGLKGNKGDQGPIGYPGEKGDRGLNG---------PA 1271

Query: 152  GIPGDEGKRGPKGDMG------YPGP-----QGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            GIPG  G  GPKGDMG      YPGP     +G+PG  GK G +G  G PG  G  G  G
Sbjct: 1272 GIPGLPGTPGPKGDMGLHGEPGYPGPVVKGEKGLPGRAGKNGREGAPGLPGMKGERGLAG 1331

Query: 201  LPG------------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            LPG                  E GL G PG +G  G+ G  G+ G+ G PG  G  G  G
Sbjct: 1332 LPGNAGLVGLPGPIGPMGPKGERGLTGAPGIDGSAGLNGAAGIKGESGYPGPKGDRGVPG 1391

Query: 243  MTGPRGNRGKSGINGVPGTPAICAYK 268
              G +G +G  GI G PG   +   K
Sbjct: 1392 FEGQKGEKGDQGIAGPPGLSGLPGLK 1417



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 101/206 (49%), Gaps = 42/206 (20%)

Query: 113  GLQGPIGQKGEIG---AKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            GL G  G KGE G    KG+ GV   +G++GEKG  G+ GPPG  G+PG +G  G  G  
Sbjct: 1367 GLNGAAGIKGESGYPGPKGDRGVPGFEGQKGEKGDQGIAGPPGLSGLPGLKGDIGAPGMD 1426

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG-------------- 212
            G+PGP G PG++G  GPK         G DGRDGLPG  G  G PG              
Sbjct: 1427 GHPGPVGAPGEKGFTGPK---------GRDGRDGLPGLRGQKGEPGLVPPPGPKGEPGHP 1477

Query: 213  -RNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGP------RGNRGKSGINGVPGTP 262
             R+G  G PG  G  G  GI G  G  GE+   G+TGP      +G RG+ G+ G+ G  
Sbjct: 1478 GRDGQKGEPGPQGERGLIGIQGERGEKGERGLIGLTGPPGRPGLKGERGEQGLIGLEGAV 1537

Query: 263  AICAYKRE---SCSLLPNSETSQLLI 285
                YK E    CS   +  T  LL 
Sbjct: 1538 GPIGYKGEPGLPCSGAQDYLTGILLT 1563



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 108/223 (48%), Gaps = 30/223 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGPPGPQGI------PGDEGKR 160
            GL GP G  G IG  G  G+KG+RG       KGA G+ G  G QG        G++G R
Sbjct: 1158 GLPGPQGNPGPIGYPGPKGIKGDRGPAGANGLKGAMGLAGRQGYQGATGLKGDKGEKGLR 1217

Query: 161  GP---------KGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLD 208
            GP         +G+ G PG  G+PG +G +G KGD   +GYPG  G  G +G  G PGL 
Sbjct: 1218 GPAAQVDMLALRGEKGLPGKHGLPGLQGLKGNKGDQGPIGYPGEKGDRGLNGPAGIPGLP 1277

Query: 209  GIPGRNGMDGIPGKDGLP-----GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G PG  G  G+ G+ G P     G+ G+PG  G NG +G  G  G +G+ G+ G+PG   
Sbjct: 1278 GTPGPKGDMGLHGEPGYPGPVVKGEKGLPGRAGKNGREGAPGLPGMKGERGLAGLPGNAG 1337

Query: 264  ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREG 306
            +         + P  E   L   P I GS  +  ++ I    G
Sbjct: 1338 LVGLPGPIGPMGPKGERG-LTGAPGIDGSAGLNGAAGIKGESG 1379



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 98/216 (45%), Gaps = 65/216 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG--------------APGVVGPPGPQG------ 152
           G+QGP G  G  G  G+ G KGERG KG               PG  G PGPQG      
Sbjct: 495 GIQGPKGDDGINGYPGQKGSKGERGYKGNAGVPGDSKLGRPGTPGQAGIPGPQGDAGRDG 554

Query: 153 IPGDEGKRGPKGDMGY------PGPQG---------IPGDEGKRGPKGDMGYPGRIGLDG 197
           IPGD+G  GPKGD G       PG +G         IPG+ G RGP G+ GY G  G DG
Sbjct: 555 IPGDKGDMGPKGDAGGKCSSCPPGLKGDKGERGLNGIPGNPGARGPPGERGYVGERGDDG 614

Query: 198 ---RDGLPGEPGLDGIPGRNGMDGIPGKD------------------GLPGK-------- 228
              + G PGE G DG PG  G  G PG+                   G PG         
Sbjct: 615 IIGQMGPPGEKGDDGYPGAPGATGKPGQSAFVDWSQIVPEKGPKGEPGYPGAAGVKGERG 674

Query: 229 -DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             GIPG  G  GE G+ G +G  G++G +G PG+P 
Sbjct: 675 DSGIPGAPGLKGEMGVKGDKGYMGQAGTDGSPGSPG 710



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 95/199 (47%), Gaps = 44/199 (22%)

Query: 112 PGLQGPIGQKGEIGAK------GEMGVKGERGEKGA---PGVVGPPGPQGIPGDE----- 157
           PG +G +G KG+ G K      G  G KGERG  G    PG  GPPG +G  G+      
Sbjct: 556 PGDKGDMGPKGDAGGKCSSCPPGLKGDKGERGLNGIPGNPGARGPPGERGYVGERGDDGI 615

Query: 158 -GKRGP---KGDMGYPGPQGIPGDEGK------------RGPKGDMGYPGRIGLDGR--- 198
            G+ GP   KGD GYPG  G  G  G+            +GPKG+ GYPG  G+ G    
Sbjct: 616 IGQMGPPGEKGDDGYPGAPGATGKPGQSAFVDWSQIVPEKGPKGEPGYPGAAGVKGERGD 675

Query: 199 DGLPGEPGL---------DGIPGRNGMDGIPGKDGLPGKDGIPGTN--GTNGEKGMTGPR 247
            G+PG PGL          G  G+ G DG PG  G  G DG PG +  G  G  G  G +
Sbjct: 676 SGIPGAPGLKGEMGVKGDKGYMGQAGTDGSPGSPGRDGVDGFPGQSIKGEPGRPGFDGYK 735

Query: 248 GNRGKSGINGVPGTPAICA 266
           G++G SG  G  G P  CA
Sbjct: 736 GDKGTSGYVGQKGEPGTCA 754



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 58/92 (63%), Gaps = 3/92 (3%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGL 207
           +G+PG EG+ GPKG  GY GP+G PGD+G++   GP G  GY G  G  G  GLPG  G+
Sbjct: 93  RGLPGPEGQTGPKGIKGYSGPEGPPGDKGQKGDPGPFGARGYKGERGTRGIPGLPGVSGV 152

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            G  G  G+ GI GKDG  G +G+PG  G +G
Sbjct: 153 QGPAGNPGLPGINGKDGCDGSEGLPGLQGLSG 184



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 88/200 (44%), Gaps = 53/200 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGV-----------------KGERGEKGAPGVVGPPGPQGIPG 155
            GL+GP G+ GE G KGE G                  KG+RG  GA G++GP G  G PG
Sbjct: 833  GLRGPPGRFGERGQKGEQGFTVAGPPGPPGRDGLTGEKGDRGPVGALGMIGPDGNPGYPG 892

Query: 156  DEGKRGPKGDMGYPGPQGIPGD---------------------------EGKRGPKGDMG 188
            D      KGD G+PG  G  G                            +G+ G KG++G
Sbjct: 893  D------KGDSGFPGQPGSTGSVGEKGEPGPVGPEGRPGPPGTPGIDGVQGRDGAKGEVG 946

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             PG +G+ G  G  G PG DG  G  G  G PGK G  G  GIPG  G  G +G+T   G
Sbjct: 947  SPGLVGMPGNKGERGAPGNDGPKGFTGPVGAPGKRGPLGAAGIPGMKGDKGARGLT---G 1003

Query: 249  NRGKSGINGVPGTPAICAYK 268
            N G  G  G  G P I   K
Sbjct: 1004 NDGLPGARGPTGPPGIMGVK 1023



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 91/174 (52%), Gaps = 24/174 (13%)

Query: 118 IGQKGEIG--AKGEMGV--KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           +GQKGE G  A  E+ V  KG +GE+GA G+ GP GP G  GD G +G KG  G  GP G
Sbjct: 744 VGQKGEPGTCAASELKVPLKGNKGERGATGMPGPNGPMGQKGDIGLQGEKGSTGPQGPPG 803

Query: 174 IPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGI--------PGK 222
           + G  G  GP+G+ G PG+ G    DG+DGL G PG  G  G+ G  G         PG+
Sbjct: 804 LVGPRGITGPRGEKGNPGQFGAPGNDGKDGLRGPPGRFGERGQKGEQGFTVAGPPGPPGR 863

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGN------RGKSGINGVPGTPAICAYKRE 270
           DGL G+    G  G  G  GM GP GN      +G SG  G PG+      K E
Sbjct: 864 DGLTGEK---GDRGPVGALGMIGPDGNPGYPGDKGDSGFPGQPGSTGSVGEKGE 914



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 78/147 (53%), Gaps = 15/147 (10%)

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGYPGPQGIPGDEGKRGPKGDMGYP-- 190
            +G  GA G VG PG  G+PG++G+RG  G+    G+ GP G P   GKRGP G  G P  
Sbjct: 936  QGRDGAKGEVGSPGLVGMPGNKGERGAPGNDGPKGFTGPVGAP---GKRGPLGAAGIPGM 992

Query: 191  ----GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT-- 244
                G  GL G DGLPG  G  G PG  G+ G  G  GLPG+DG+ G  G  G +G+   
Sbjct: 993  KGDKGARGLTGNDGLPGARGPTGPPGIMGVKGDIGPRGLPGQDGLHGLAGEKGNQGLPGF 1052

Query: 245  -GPRGNRGKSGINGVPGTPAICAYKRE 270
             GP+G  G +   G  G P +   + +
Sbjct: 1053 DGPQGEPGDASEKGQKGEPGVSGLRGQ 1079



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 107/258 (41%), Gaps = 74/258 (28%)

Query: 79  STHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE--------- 129
                P     +  ++PL   +G   +T     PG  GP+GQKG+IG +GE         
Sbjct: 745 GQKGEPGTCAASELKVPLKGNKGERGATGM---PGPNGPMGQKGDIGLQGEKGSTGPQGP 801

Query: 130 ------MGVKGERGEKGAPGVVGPPGP------QGIPGDEGKRGPKGDMGY--------P 169
                  G+ G RGEKG PG  G PG       +G PG  G+RG KG+ G+        P
Sbjct: 802 PGLVGPRGITGPRGEKGNPGQFGAPGNDGKDGLRGPPGRFGERGQKGEQGFTVAGPPGPP 861

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR---------------- 213
           G  G+ G++G RGP G +G    IG DG  G PG+ G  G PG+                
Sbjct: 862 GRDGLTGEKGDRGPVGALGM---IGPDGNPGYPGDKGDSGFPGQPGSTGSVGEKGEPGPV 918

Query: 214 -----------------NGMDGIPGKDGLPGKDGIPGTN------GTNGEKGMTGPRGNR 250
                             G DG  G+ G PG  G+PG        G +G KG TGP G  
Sbjct: 919 GPEGRPGPPGTPGIDGVQGRDGAKGEVGSPGLVGMPGNKGERGAPGNDGPKGFTGPVGAP 978

Query: 251 GKSGINGVPGTPAICAYK 268
           GK G  G  G P +   K
Sbjct: 979 GKRGPLGAAGIPGMKGDK 996



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 18/104 (17%)

Query: 118 IGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           +GQ+G++G KGE+G  GE+G     G PG  G  G +G+PG  G+RG +G+ G PGP G 
Sbjct: 296 MGQRGDVGQKGEIGPMGEKGGLGPVGEPGHDGQKGEKGLPGGAGERGRQGNFGPPGPAGQ 355

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            GD G+ G                +GLPG+PGL G PGR G  G
Sbjct: 356 KGDRGETG---------------LNGLPGQPGLKGEPGRPGNSG 384



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 83/162 (51%), Gaps = 29/162 (17%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------PKGDMGYPGPQG-------IP 175
            KGE+GE G  G  G PGP+G  G++G+RG         P+GD G  G +G       +P
Sbjct: 212 AKGEKGEPGFAGRSGYPGPEGQRGEKGERGDTGPYGPPGPRGDRGIKGEKGAACFATAMP 271

Query: 176 GDEGKRGPKGD-------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           G++G +G KGD             MG  G +G  G  G  GE G  G  G  G DG  G+
Sbjct: 272 GEKGDKGEKGDPAPKLPVHGSDTVMGQRGDVGQKGEIGPMGEKGGLGPVGEPGHDGQKGE 331

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            GLPG  G  G  G  G  G  G +G+RG++G+NG+PG P +
Sbjct: 332 KGLPGGAGERGRQGNFGPPGPAGQKGDRGETGLNGLPGQPGL 373



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 3/96 (3%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---GYPGPQGIPGDEGKRGPKGDMGYPG 191
           E+G +G PG  G  GP+GI G  G  GP GD    G PGP G  G +G+RG +G  G PG
Sbjct: 89  EKGNRGLPGPEGQTGPKGIKGYSGPEGPPGDKGQKGDPGPFGARGYKGERGTRGIPGLPG 148

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G+ G  G PG PG++G  G +G +G+PG  GL G
Sbjct: 149 VSGVQGPAGNPGLPGINGKDGCDGSEGLPGLQGLSG 184



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 71/157 (45%), Gaps = 33/157 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP GQ G  G KG  G +G  G+KG          +G PG  G RG KG+ G  G  
Sbjct: 94  GLPGPEGQTGPKGIKGYSGPEGPPGDKGQ---------KGDPGPFGARGYKGERGTRGIP 144

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------------NGMDGIP 220
           G+PG  G +GP G+ G PG  G DG DG  G PGL G+ G              G  G P
Sbjct: 145 GLPGVSGVQGPAGNPGLPGINGKDGCDGSEGLPGLQGLSGMAGPRGYPGGPGLKGEKGEP 204

Query: 221 GKD------------GLPGKDGIPGTNGTNGEKGMTG 245
            K+            G  G+ G PG  G  GEKG  G
Sbjct: 205 AKENGDYAKGEKGEPGFAGRSGYPGPEGQRGEKGERG 241



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 79/165 (47%), Gaps = 27/165 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPGL G  G KG+I               GAPG+ G PGP G PG++G  GPKG  G   
Sbjct: 1407 PPGLSGLPGLKGDI---------------GAPGMDGHPGPVGAPGEKGFTGPKGRDGR-- 1449

Query: 171  PQGIPGDEGKRGPKG---------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
              G+PG  G++G  G         + G+PGR G  G  G  GE GL GI G  G  G  G
Sbjct: 1450 -DGLPGLRGQKGEPGLVPPPGPKGEPGHPGRDGQKGEPGPQGERGLIGIQGERGEKGERG 1508

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
              GL G  G PG  G  GE+G+ G  G  G  G  G PG P   A
Sbjct: 1509 LIGLTGPPGRPGLKGERGEQGLIGLEGAVGPIGYKGEPGLPCSGA 1553



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 81/190 (42%), Gaps = 52/190 (27%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGI------------------PGDEGKRGPKGDMGY 168
           KG  G  G+ G +G  G+ GP GPQG                    G +G++G  G +G 
Sbjct: 408 KGPRGYTGQPGPQGLNGMDGPIGPQGYIGPKGGPGVPGHPGNEGPAGQKGEKGNAGRLGS 467

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGL--------DGRDGLPGEPGLD------------ 208
            GP G  G  G  GP+G  G PG  G         DG +G PG+ G              
Sbjct: 468 QGPVGPIGHNGPPGPEGQKGEPGTPGYGIQGPKGDDGINGYPGQKGSKGERGYKGNAGVP 527

Query: 209 -----GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---------RGNRGKSG 254
                G PG  G  GIPG  G  G+DGIPG  G  G KG  G          +G++G+ G
Sbjct: 528 GDSKLGRPGTPGQAGIPGPQGDAGRDGIPGDKGDMGPKGDAGGKCSSCPPGLKGDKGERG 587

Query: 255 INGVPGTPAI 264
           +NG+PG P  
Sbjct: 588 LNGIPGNPGA 597



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 95/230 (41%), Gaps = 51/230 (22%)

Query: 82  NNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGE 138
            +P   L  +    ++  +G      E  P G +G   P+G+ G  G KGE G+ G  GE
Sbjct: 281 GDPAPKLPVHGSDTVMGQRGDVGQKGEIGPMGEKGGLGPVGEPGHDGQKGEKGLPGGAGE 340

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG------------------- 179
           +G  G  GPPGP G  GD G+ G  G  G PG +G PG  G                   
Sbjct: 341 RGRQGNFGPPGPAGQKGDRGETGLNGLPGQPGLKGEPGRPGNSGERGLVGPPGPPGGGRG 400

Query: 180 ------KRGPKGDMGYPGRIGLDGRDGLPGEPGL---------------DGIPGRNGMDG 218
                  +GP+G  G PG  GL+G DG  G  G                +G  G+ G  G
Sbjct: 401 QPGAPGPKGPRGYTGQPGPQGLNGMDGPIGPQGYIGPKGGPGVPGHPGNEGPAGQKGEKG 460

Query: 219 IPGKDGLP------GKDGIPGTNGTNGEKGMT--GPRGNRGKSGINGVPG 260
             G+ G        G +G PG  G  GE G    G +G +G  GING PG
Sbjct: 461 NAGRLGSQGPVGPIGHNGPPGPEGQKGEPGTPGYGIQGPKGDDGINGYPG 510



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 73/162 (45%), Gaps = 35/162 (21%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           +GP GQKGE G  G +G +G          VGP G  G PG EG++G  G  GY      
Sbjct: 450 EGPAGQKGEKGNAGRLGSQGP---------VGPIGHNGPPGPEGQKGEPGTPGY------ 494

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
               G +GPKGD         DG +G PG+ G  G  G  G  G+PG      K G PGT
Sbjct: 495 ----GIQGPKGD---------DGINGYPGQKGSKGERGYKGNAGVPGDS----KLGRPGT 537

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G     G+ GP+G+ G+ GI G  G           CS  P
Sbjct: 538 PGQ---AGIPGPQGDAGRDGIPGDKGDMGPKGDAGGKCSSCP 576


>gi|397524284|ref|XP_003832130.1| PREDICTED: collagen alpha-1(IV) chain [Pan paniscus]
 gi|410298984|gb|JAA28092.1| collagen, type IV, alpha 1 [Pan troglodytes]
 gi|410339999|gb|JAA38946.1| collagen, type IV, alpha 1 [Pan troglodytes]
          Length = 1669

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 37/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            PG QG  G  G+ GAKGE        +G+ G RGEKG  G+ G       PG  G++G K
Sbjct: 1031 PGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAG------FPGSPGEKGEK 1084

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
            G +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIPG  G  G+PG  
Sbjct: 1085 GTIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTP 1141

Query: 222  -------KDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRGKSGINGVPGTPA 263
                   + G PG DGIPG+ G  GE G+            G +G++G+ G  G+ G+P 
Sbjct: 1142 GPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPG 1201

Query: 264  ICAYKRE 270
            I   K E
Sbjct: 1202 IPGSKGE 1208



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 863  PGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPG---LPGE------KGDHGFPGS 913

Query: 172  QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
             G  GD G +G KGD+G PG+                        IG  G  G  G+PG 
Sbjct: 914  SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 973

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 974  PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 1023



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 82/153 (53%), Gaps = 29/153 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD   PG  G PG  
Sbjct: 948  GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD---PGISGTPGAP 1004

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GPKG +G     G+    GLPG PG  G+PG      IPG  G PG   +PG  G  
Sbjct: 1005 GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGSPG---LPGDKGAK 1046

Query: 239  GEKGMTGP--------RGNRGKSGINGVPGTPA 263
            GEKG  GP        RG +G  GI G PG+P 
Sbjct: 1047 GEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPG 1079



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 91/172 (52%), Gaps = 28/172 (16%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 960  GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 1019

Query: 167  ---------GYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP--- 211
                     G PGPQ   G+PGD+G +G KG  G PG IG+ G  G  G+ G+ G P   
Sbjct: 1020 GTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSP 1078

Query: 212  ---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G  G  GIPG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG
Sbjct: 1079 GEKGEKGTIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 1130



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 94/186 (50%), Gaps = 37/186 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVG-P--PGPQ-- 151
            PG  G  GQ G+ G KG+ G+ G  G  G                PG  G P  PGPQ  
Sbjct: 977  PGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGS 1036

Query: 152  -GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGE 204
             G+PGD+G +G KG  G PG  GIPG  G++G +G  G+PG  G  G        G+PG 
Sbjct: 1037 PGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSPGEKGEKGTIGIPGMPGS 1095

Query: 205  PGLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGI 255
            PGL G PG  G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G 
Sbjct: 1096 PGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGS 1155

Query: 256  NGVPGT 261
            +G+PG+
Sbjct: 1156 DGIPGS 1161



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 86/176 (48%), Gaps = 25/176 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL  P G KG+ GA+G  G+ G+ G  G PG  G PG  G PG +G+ G  G  G PG 
Sbjct: 834  PGLDMP-GPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGS 892

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD------------- 217
             G  G  G  G KGD G+PG  G  G  GL G+ G  G+PG+ G MD             
Sbjct: 893  PGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGD 952

Query: 218  ----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                      G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 953  QGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 1008



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 74/143 (51%), Gaps = 16/143 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-------P--K 163
            G  G  G+KGE G  G  G+ G  G KG+PG VG PG  G+PG++G +G       P  K
Sbjct: 1073 GFPGSPGEKGEKGTIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVK 1132

Query: 164  GDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+ G PG   P G     G++G  G  G PG  G  G  GLPG  G  G PG  G  G  
Sbjct: 1133 GEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPGR-GFPGFPGAKGDKGSK 1188

Query: 221  GKDGLPGKDGIPGTNGTNGEKGM 243
            G+ G PG  G PG  G+ GE+G 
Sbjct: 1189 GEVGFPGLAGSPGIPGSKGEQGF 1211



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 81/178 (45%), Gaps = 46/178 (25%)

Query: 111 PPGL--QGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQGIPGDEGKRGPK 163
           PPG+  Q  + +KG+   KGE G KGE G +G PGV      G PGP+G PG +G +G K
Sbjct: 239 PPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEK 298

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGEPGLDGIP 211
           G  G+PG  G PG  G++GP+G+ G              G +G  G  G PG PG  G P
Sbjct: 299 GSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEP 358

Query: 212 GRNGMD--------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           G  G                      G PG+ G  G  G PGT+       + GP G 
Sbjct: 359 GPKGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGTS-------LPGPSGR 409



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 58/123 (47%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           EIG  G+ G KG+RG  G  GV G PGPQG PG  G+ G KG+                 
Sbjct: 487 EIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGE----------------- 529

Query: 183 PKGDMGYPGRIGLD----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                  PG I  D    G  G PG PG  G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 530 -------PGEIYFDLRLKGDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLK 582

Query: 239 GEK 241
           GE+
Sbjct: 583 GER 585



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 72/149 (48%), Gaps = 33/149 (22%)

Query: 127 KGEMGV--KGERGEKGAPGVVGPPGPQGIPG--------DEGKRGPKGDMGYPGPQGIPG 176
           KG+MG+  +G +G+KG  GV GPPG   +PG        D   +G KG  G PG QG+PG
Sbjct: 217 KGQMGLSFQGPKGDKGDQGVSGPPG---VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPG 273

Query: 177 -----DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
                + GK GP+G  G  G  G  G  G PGEPG  G+ GR G  G  G+         
Sbjct: 274 VGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGI 333

Query: 224 -------GLPGKDGIPGTNGTNGEKGMTG 245
                  G  G+ G PGT G  GE G  G
Sbjct: 334 VIGTGPLGEKGERGYPGTPGPRGEPGPKG 362



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 85/203 (41%), Gaps = 66/203 (32%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP GQKGE G+    G     GE+GE G PG   P    G PG +G +G KG++G+
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSA---GEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGF 1193

Query: 169  P---GPQGIPGDEGKR-----------------------GPKGDM--------------- 187
            P   G  GIPG +G++                       GPKGD                
Sbjct: 1194 PGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPM 1253

Query: 188  ---------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                           G PG  G  G  G  G+PG  G+PG  G  GI G  G  G  G+P
Sbjct: 1254 GPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVP 1313

Query: 233  GTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G  G+ G +G++G  GI
Sbjct: 1314 GFQGPKGLPGLQGIKGDQGDQGI 1336



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 57/137 (41%), Gaps = 45/137 (32%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 644 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 703

Query: 184 ------------------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                                   +G  G PG +GL G  GLPG PG+ G PG  G  G+
Sbjct: 704 PGDVGPPGTPGRPGFNGLPGNPGVQGQKGEPG-VGLPGLKGLPGLPGIPGTPGEKGSIGV 762

Query: 220 PGKDGLPGKDGIPGTNG 236
           PG  G  G  G PG  G
Sbjct: 763 PGVPGEHGAIGPPGLQG 779



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 79/185 (42%), Gaps = 43/185 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
           GL G  G  G  G KG +GV G  GE GA   +GPPG QGI G+ G              
Sbjct: 743 GLPGLPGIPGTPGEKGSIGVPGVPGEHGA---IGPPGLQGIRGEPGPPGLPGSVGSPGVP 799

Query: 160 -------------------------RGPKGDMGYPG--PQGIPGDEGKRGPKGDMGYPGR 192
                                    +G KG  G+PG    G  GD+G +G  G  G  G 
Sbjct: 800 GIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGL 859

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            GL G+ G PG PG  G  G  G+ G PG+ G PG  G PG  G  G+ G  G  G RG 
Sbjct: 860 PGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGD 919

Query: 253 SGING 257
            G+ G
Sbjct: 920 PGLKG 924



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--GIPGRN 214
           +G +G KGD G  GP G+PG + +   KGD    G  G  G  G  G PG+   G PG+ 
Sbjct: 225 QGPKGDKGDQGVSGPPGVPG-QAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKP 283

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G PGKDG  G+ G PG  G  G  G+ G +G +G+ G
Sbjct: 284 GPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKG 323


>gi|387542762|gb|AFJ72008.1| collagen alpha-2(IV) chain preproprotein [Macaca mulatta]
          Length = 1712

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/149 (46%), Positives = 86/149 (57%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP GQ G  G  G+ G  G  G++G  G+ G PG +G+PGD   RG  GD+G PGP
Sbjct: 823 PGLPGPSGQPGLSGPPGQHGFPGAPGQEGPLGLPGIPGLEGLPGD---RGDPGDIGAPGP 879

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
              +G+ GD G  G  G+ G+PG  G  G DG+PG PGL G  G  GMDG  G  GL G+
Sbjct: 880 VGMKGVSGDRGDAGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGR 939

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG+ G  G  G+ G +G  G+ G  G
Sbjct: 940 PGFPGSKGEAGFFGIPGLKGLAGEPGFKG 968



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 94/169 (55%), Gaps = 15/169 (8%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     +  PPG +G  G  G  G KG+ G+ G  G+   PG+ GPPG  G PG  G+ 
Sbjct: 794 GFKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGPSGQ---PGLSGPPGQHGFPGAPGQE 850

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------LPGEPGLDGIPGRN 214
           GP G  G PG +G+PGD   RG  GD+G PG +G+ G  G      L GE G  G PG  
Sbjct: 851 GPLGLPGIPGLEGLPGD---RGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGHPGSPGFK 907

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
           G+DG+PG  GL G+ G PG +G  G    KG  G  G++G++G  G+PG
Sbjct: 908 GIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPG 956



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 82/151 (54%), Gaps = 6/151 (3%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           + G +G+ GV G+ G KG PG  GPPG +G  G  G  G KG  G PGP G PG     G
Sbjct: 780 QPGPRGDAGVPGQPGFKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGPSGQPG---LSG 836

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           P G  G+PG  G +G  GLPG PGL+G+PG     G PG  G PG  G+ G +G  G+ G
Sbjct: 837 PPGQHGFPGAPGQEGPLGLPGIPGLEGLPGDR---GDPGDIGAPGPVGMKGVSGDRGDAG 893

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           + G RG+ G  G  G+ G P     K E  S
Sbjct: 894 LAGERGHPGSPGFKGIDGMPGTPGLKGERGS 924



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 86/158 (54%), Gaps = 14/158 (8%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK----RGPKGDMGYPGPQGIPG 176
            KGE G +G MG+KG  G KG  G+ G PG  GIPG  G+    +G KGD+G PG  G+PG
Sbjct: 990  KGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGAPGIPGLPG 1049

Query: 177  DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-------IPGKDGLPGKD 229
              G  GP G  G+PG IG  G  G PG  GL G  G  G  G       +PG+ GL G+ 
Sbjct: 1050 FPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGPTGDFGDIGDTINLPGRPGLKGEQ 1109

Query: 230  ---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
               GIPG  G  GEKG  G  G  G +G+ GV G P +
Sbjct: 1110 GTAGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGL 1147



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 106/224 (47%), Gaps = 37/224 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G  G  G  G  G  G  G+ G +G PGV G      +PG++G RG +G MG  GP
Sbjct: 1307 PGSKGDAGNPGAPGTPGTKGWAGDSGPQGRPGVFG------LPGEKGPRGEQGFMGNTGP 1360

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-------EPGLDGIPGRNGMDGIPGK-- 222
             G  GD G +GPKGD G+PG  G+ G  G+ G        PG  G  GR G  G PG+  
Sbjct: 1361 AGAVGDRGPKGPKGDPGFPGAPGIVGAPGIAGIPQKIAIPPGTVGPQGRRGPPGAPGEMG 1420

Query: 223  ----------DGLPGKDGIPGTNGTN------GEKGMTGPRGNRGKSGINGVPGTPAICA 266
                       G PGK G  G  G +      G++G  G +G  G+ G  G PG+P +  
Sbjct: 1421 PQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPVGHQGPIGQEGAPGRPGSPGLPG 1480

Query: 267  YKRESCS----LLPNSETSQLLIPPTIVGSEHIFSSSPIVVREG 306
                S S    L+ +S+T Q  + P  VG   ++S   ++  EG
Sbjct: 1481 MPGRSVSIGYLLVKHSQTEQEPMCP--VGMNKLWSGYSLLYFEG 1522



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 81/168 (48%), Gaps = 21/168 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+G  G  G  G KG  G KG  G+ G PG+ G  G QG PG +G+ G  G  G PG 
Sbjct: 1103 PGLKGEQGTAGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGS 1162

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
            QG PG  G  G KGD G+PG  GL G  GL G  GL G+PG  G  G PG D        
Sbjct: 1163 QGEPGRIGLPGGKGDDGWPGIAGLPGFPGLRGIRGLHGLPGTKGFPGSPGADIHGDPGFP 1222

Query: 224  -------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                          LPG  G+PG  G  G  G  GP G+ G  G  G+
Sbjct: 1223 GPPGDRGDPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGLQGFPGI 1270



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 85/175 (48%), Gaps = 20/175 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP+G  G  G +G  G +G+ G+ GAPG VG  G  G  GD G  G +G  G PG 
Sbjct: 847  PGQEGPLGLPGIPGLEGLPGDRGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGHPGSPGF 906

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            +GI G  G  G KG+ G PG  G  G  GL G PG  G  G  G  GIPG  GL G+ G 
Sbjct: 907  KGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGF 966

Query: 232  PGTNG-----------------TNGEKGMTGPRGNR---GKSGINGVPGTPAICA 266
             G+ G                   GEKG  GP G +   G  GI G+PG P +  
Sbjct: 967  KGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSG 1021



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 96/207 (46%), Gaps = 52/207 (25%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE-------------KGAPGVVGPPGPQGIPGDEG- 158
            G  G IG +G+ GA G  G+ GE G               G PG+ G  G  GIPG +G 
Sbjct: 1061 GFPGFIGSRGDKGAPGRAGLYGEIGPTGDFGDIGDTINLPGRPGLKGEQGTAGIPGLKGF 1120

Query: 159  --KRGPKGDMGYP------GPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGE 204
              ++G +GD+G+P      G QG PG +G+       GP G  G PGRIGL G  G  G 
Sbjct: 1121 FGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQGEPGRIGLPGGKGDDGW 1180

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------------------------GE 240
            PG+ G+PG  G+ GI G  GLPG  G PG+ G +                        G 
Sbjct: 1181 PGIAGLPGFPGLRGIRGLHGLPGTKGFPGSPGADIHGDPGFPGPPGDRGDPGDANTLPGP 1240

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAY 267
             G+ G +G +G  G  G PG+P +  +
Sbjct: 1241 VGVPGQKGEQGAPGERGPPGSPGLQGF 1267



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 85/164 (51%), Gaps = 33/164 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMG----VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           PGL G  G +G  G KG+ G     +G+   +G PG+ GP G  GI G+ G++G KGD G
Sbjct: 462 PGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGINGEPGRKGDKGDPG 521

Query: 168 ------YPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGL---DGIPGRNG 215
                 +PG +G+PG+ G  GPKG  G    I   G  G+ G+PG PG+   DG PGRNG
Sbjct: 522 QHGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRNG 581

Query: 216 M--------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           +               G PG  G P   GIPGT GT GE G  G
Sbjct: 582 LDGFPGLPGPPGDGIKGPPGDAGYP---GIPGTKGTPGEMGPPG 622



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 90/202 (44%), Gaps = 54/202 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERG---------------------EKGAPGV---VGPP 148
            G  GP+G KG  G +G+ G+ GERG                     E+G+PG+    G P
Sbjct: 875  GAPGPVGMKGVSGDRGDAGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMP 934

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------------- 186
            G +G PG  G +G  G  G PG +G+ G+ G +G +GD                      
Sbjct: 935  GLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPIILPGMKDIKGEKG 994

Query: 187  ----MGYPGRIGLDGRDGLPGEPGLDGIPGRNG----MDGIPGKDGLPGKDGIPGTNGTN 238
                MG  G +G  G  G+PG PGL GIPG  G    + G+ G  G PG  G+PG  G  
Sbjct: 995  DEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGAPGIPGLPGFPGVA 1054

Query: 239  GEKGMTGPRGNRGKSGINGVPG 260
            G  G+TG  G  G  G  G PG
Sbjct: 1055 GPPGITGFPGFIGSRGDKGAPG 1076



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 87/187 (46%), Gaps = 36/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G +GE    G +G+ G +G+ G PG+ G      +PG  G RG +G  G PG 
Sbjct: 1154 PGLTGPPGSQGE---PGRIGLPGGKGDDGWPGIAG------LPGFPGLRGIRGLHGLPGT 1204

Query: 172  QGIPGDEGK--------------RGPKGDMG-YPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G PG  G               RG  GD    PG +G+ G+ G  G PG  G PG  G+
Sbjct: 1205 KGFPGSPGADIHGDPGFPGPPGDRGDPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGL 1264

Query: 217  DGIPG------KDGLPGKDGIPGTNGTNGEKGMTGPR------GNRGKSGINGVPGTPAI 264
             G PG        G PG  G PG  G  G +G  GP       G++G +G  G PGTP  
Sbjct: 1265 QGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDAGNPGAPGTPGT 1324

Query: 265  CAYKRES 271
              +  +S
Sbjct: 1325 KGWAGDS 1331



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 62/119 (52%), Gaps = 16/119 (13%)

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG----YPGRIGLDGRDGLPGEPGLDGI--- 210
           G++G KG  G+PG  G PG  G +G KGD G      G   + G  GLPG  G  GI   
Sbjct: 451 GRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGINGE 510

Query: 211 PGRNGMDGIPGKDGLPG---KDGIPGTNGTNGEKGMTG------PRGNRGKSGINGVPG 260
           PGR G  G PG+ GLPG     G+PG  G  G KG  G       +G RG+ G+ GVPG
Sbjct: 511 PGRKGDKGDPGQHGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPGVPGVPG 569



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 76/173 (43%), Gaps = 39/173 (22%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD----EGKRGPKGDMGYPGPQGIPGDEG 179
            G KG  G  G  G  G+PG  GP G +G  GD    EG    +G  G PGP+G  G  G
Sbjct: 450 FGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGING 509

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------------------GRNGMDG 218
           + G KGD G PG+       GLPG PGL G+P                     G  G  G
Sbjct: 510 EPGRKGDKGDPGQ------HGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPG 563

Query: 219 IPGKDGLPGKDGIPGTNG--------TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           +PG  G+ G DG PG NG             G+ GP G+ G  GI G  GTP 
Sbjct: 564 VPGVPGMKGDDGSPGRNGLDGFPGLPGPPGDGIKGPPGDAGYPGIPGTKGTPG 616



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 72/153 (47%), Gaps = 31/153 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G  G  G  G  G KG+ G+ G PG    PG +G+P         G++G PGP
Sbjct: 496 PGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGF---PGLKGVP---------GNVGAPGP 543

Query: 172 QGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGL--------------DGIPGRN 214
           +G  GD      +G +G  G PG  G+ G DG PG  GL               G PG  
Sbjct: 544 KGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRNGLDGFPGLPGPPGDGIKGPPGDA 603

Query: 215 GMDGIPGKDGLPGKDGIPGTN--GTNGEKGMTG 245
           G  GIPG  G PG+ G PG    G  G++G  G
Sbjct: 604 GYPGIPGTKGTPGEMGPPGLGLPGFKGQRGFPG 636



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 64/134 (47%), Gaps = 19/134 (14%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQG 152
            QGF  +T      G +GP G KG+ G  G  G+ G  G  G        PG VGP G +G
Sbjct: 1352 QGFMGNTGPAGAVGDRGPKGPKGDPGFPGAPGIVGAPGIAGIPQKIAIPPGTVGPQGRRG 1411

Query: 153  IPGDEGK------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
             PG  G+            RG  G  G  G  G+    G RG +G +G+ G IG +G  G
Sbjct: 1412 PPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPVGHQGPIGQEGAPG 1471

Query: 201  LPGEPGLDGIPGRN 214
             PG PGL G+PGR+
Sbjct: 1472 RPGSPGLPGMPGRS 1485



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 9/76 (11%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G +G+ G  G  G  GPPG QG PG +G++G KG+ G P         G  GPKGD+G
Sbjct: 56  EKGGRGQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAP---------GITGPKGDVG 106

Query: 189 YPGRIGLDGRDGLPGE 204
             G  G  G DG+PG 
Sbjct: 107 ARGVSGFPGADGIPGH 122



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 91/255 (35%), Gaps = 81/255 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-PQGIPGDEGKRGPKGDMGYPGP 171
           G +G  GQKG  G  G  G  G RG KG  G +GPPG P   P     +G +GD G+PG 
Sbjct: 311 GEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDLGPPGLPAYSPHPSLAKGARGDPGFPGA 370

Query: 172 QGIPGDE--------------------------GKRGPKGDMGYPG-------------- 191
           QG PG +                          G+ GPKG +G PG              
Sbjct: 371 QGEPGSQGEPGDPGPRGPPGLSIGDEDQRRGLPGEMGPKGFIGDPGIPALYPGPPGPDGK 430

Query: 192 ------------------RIGLDGRDGLPGEPGLDGIPGRNG------------------ 215
                               G  G  G PG PGL G PG  G                  
Sbjct: 431 PGPPGPPGLPGPPGPDGFLFGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDE 490

Query: 216 ----MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               + G+PG  G  G +G PG  G  G+ G  G  G  G  G+ G  G P     K +S
Sbjct: 491 AVRGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGAPGPKGAKGDS 550

Query: 272 CSLLPNSETSQLLIP 286
            ++    E  Q  +P
Sbjct: 551 RTITTKGERGQPGVP 565



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 21/121 (17%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           E+G +G PG VGP         +G  GP G  G+PG QG  GD+G+RG  G  G  G +G
Sbjct: 56  EKGGRGQPGPVGP---------QGYNGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVG 106

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG             DGIPG  G  G  G PG +G NG +G +GP+G  G  G
Sbjct: 107 ARGVSGFPG------------ADGIPGHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEG 154

Query: 255 I 255
            
Sbjct: 155 F 155


>gi|395857394|ref|XP_003801079.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-2(V) chain [Otolemur
           garnettii]
          Length = 1491

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 96/183 (52%), Gaps = 33/183 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP     
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPV---- 518

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRI---GLDGRDGLPG 203
             G+RGP G+ G+PG  G+PG +G +         GPKG  G PGR+   GL G  GL G
Sbjct: 519 --GERGPPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRLGEPGLPGARGLTG 576

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGING 257
            PG+ G  G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  G
Sbjct: 577 NPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAG 636

Query: 258 VPG 260
           VPG
Sbjct: 637 VPG 639



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RGP G+ G+PG  GL G  G  GE G  G  G  G  G PG+ G P   G+PG  
Sbjct: 516 GPVGERGPPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRLGEP---GLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 91/202 (45%), Gaps = 39/202 (19%)

Query: 101 GFCNSTKEYCPPGLQG------------PIGQKGEIGAKGEMGVKG-------------- 134
           G   +  +  PPGLQG            P G +G IG KG  G  G              
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 135 -------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------GIPGDEGKR 181
                  E+GE G  G+VGPPG +G PG  G+ GP G +G+ GPQ      G+ G+ G+ 
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEP 866

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G KGD G PG  GL G  G  G  G+ G+ G  G  G PG  G PG  G  G  G  G  
Sbjct: 867 GQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAV 926

Query: 242 GMTGPRGNRGKSGINGVPGTPA 263
           G  GP G  GK G  G+ G P 
Sbjct: 927 GPAGPLGEPGKEGPPGLRGDPG 948



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 90/194 (46%), Gaps = 33/194 (17%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            M+G    T    P   +GP GQ+GE G  G +G  G  G  G  G  G  GP G PG  
Sbjct: 384 GMKGEAGPTGARGP---EGPQGQRGETGPPGPVGSSGLPGAMGTDGTPGAKGPMGSPGTS 440

Query: 158 GKR---------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G                 GP+G  G PG  G+PG +G+ GPKG+   PG  G+ G  G P
Sbjct: 441 GPPGLAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGE---PGPHGIQGPIGPP 497

Query: 203 GE---------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNR 250
           GE         PG  G PG  G  G PG  G PG DG+PG  G  GE+   G +GP+G +
Sbjct: 498 GEEGKRGPRGDPGTVGPPGPVGERGPPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQ 557

Query: 251 GKSGINGVPGTPAI 264
           G  G  G PG P  
Sbjct: 558 GDPGRLGEPGLPGA 571



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 89/198 (44%), Gaps = 54/198 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPKGDM-- 166
           PG+ G  G+KG  G  G  G KG  G  G PG  GPPG QG+PG+    G  GPKGD   
Sbjct: 722 PGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGG 781

Query: 167 ----------------------------------GYPGPQGI---------PGDEGKRGP 183
                                             G PGP+G+         PG  G+ GP
Sbjct: 782 IGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGP 841

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G +G+ G  G DG+ G+ GEPG    PG+ G  G PG  GL    G PG +G NG  G+
Sbjct: 842 TGAVGFAGPQGPDGQPGVKGEPGE---PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGL 895

Query: 244 TGPRGNRGKSGINGVPGT 261
            G RG +G  G  G PG+
Sbjct: 896 KGGRGTQGPPGATGFPGS 913



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/152 (44%), Positives = 82/152 (53%), Gaps = 9/152 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 279 GFTGSPGARGFPGAPGLPGLKGHRGHKG---LDGPKGEVGAPGSKGEAGPTGPMGAMGPL 335

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G  G  G PG  G  GI G  G  G PG  G  G  
Sbjct: 336 GPRGMPGERGRLGPQ---GAPGQRGAHGMPGKPGPMGPLGIAGSAGFPGNPGMKGEAGPT 392

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G  G++G TGP G  G SG+ G  GT
Sbjct: 393 GARGPEGPQGQRGETGPPGPVGSSGLPGAMGT 424



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 92/184 (50%), Gaps = 24/184 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLDGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGL------------------PGEPGL 207
            G  G+PG  G  GP    G  G+PG  G+ G  G                   PG  G 
Sbjct: 356 RGAHGMPGKPGPMGPLGIAGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGS 415

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G+PG  G DG PG  G  G  G  G  G  G  G  GP+G+ G  GI G PG P +  +
Sbjct: 416 SGLPGAMGTDGTPGAKGPMGSPGTSGPPGLAGPPGSPGPQGSTGPQGIRGQPGDPGVPGF 475

Query: 268 KRES 271
           K E+
Sbjct: 476 KGEA 479



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 78/145 (53%), Gaps = 6/145 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEAGRNGNPGEVGFTGSPGARGFPGAPGLPGLKGHRGHKGLDGPKGEVGAPGSKGEAGPT 326

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GI G  G PG  G+ 
Sbjct: 327 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIAGSAGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G +G  GP+G RG++G  G
Sbjct: 387 GEAGPTGARGPEGPQGQRGETGPPG 411



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP         E
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGGQGDPGRLGEPGLPGARGLTGNPGVQGP---------E 584

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK GP G  G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    
Sbjct: 585 GKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR--- 641

Query: 218 GIPGKDG 224
           G PGKDG
Sbjct: 642 GAPGKDG 648



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 54/103 (52%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP GQ G  G  GE G KG+ G  G  G+ G PGP G  G  G +G +G  G PG  
Sbjct: 849 GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 908

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           G PG  G+ GP G  G  G  G  G  G  G PGL G PG +G
Sbjct: 909 GFPGSAGRVGPPGPTGAVGPAGPLGEPGKEGPPGLRGDPGSHG 951



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 67/146 (45%), Gaps = 2/146 (1%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G PG+ G  G  G  G+PG  G+PG +G RG KG  G  G +G  G  G  G  G  G  
Sbjct: 273 GNPGEVGFTGSPGARGFPGAPGLPGLKGHRGHKGLDGPKGEVGAPGSKGEAGPTGPMGAM 332

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G  G  G+PG+ G  G  G PG  G +G  G  GP G  G +G  G PG P +      +
Sbjct: 333 GPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIAGSAGFPGNPGMKGEAGPT 392

Query: 272 CSLLPNSETSQL--LIPPTIVGSEHI 295
            +  P     Q     PP  VGS  +
Sbjct: 393 GARGPEGPQGQRGETGPPGPVGSSGL 418



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 80/200 (40%), Gaps = 48/200 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPAGPPGEPGEPGPMGPIGARGPEGPPGKPGEDGEAGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 272 NGNPGEVGFTGSPGARGFPGAPGLPGLKGHRGHKGLDGPKGEVGAPGSKGEAGPTGPMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+ G  G PG  G  GE G 
Sbjct: 332 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIAGSAGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGINGVPGTPA 263
           TG RG  G  G  G  G P 
Sbjct: 392 TGARGPEGPQGQRGETGPPG 411



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 88/236 (37%), Gaps = 75/236 (31%)

Query: 100  QGFCNSTKEYCP---PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            QG   S   + P   PGL+G  G +G  GA G  G  G  G  G  G VGP GP G PG 
Sbjct: 878  QGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAVGPAGPLGEPGK 937

Query: 157  EGKRGPKGDMGY---------------------------------------PGPQGIPGD 177
            EG  G +GD G                                         G +GI G 
Sbjct: 938  EGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQSGPDGPPGPAGTTGQRGIVGM 997

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPG---------------------EPGL------DGI 210
             G+RG +G  G PG  G  G+ G  G                     EPG       DG 
Sbjct: 998  PGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGT 1057

Query: 211  PGRNGM------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGR+G        G PG  GLPG  G PGT G  G  G  G RG+ G  G  G PG
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPG 1113


>gi|321463454|gb|EFX74470.1| hypothetical protein DAPPUDRAFT_307295 [Daphnia pulex]
          Length = 1289

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 107/207 (51%), Gaps = 30/207 (14%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEI------------GAKGEMGVKGERGEKGAPGVV 145
            +QG   +T      G +GP G KGE             GA G+ G  G +GE+G PG+ 
Sbjct: 713 GVQGLPGAT------GPEGPQGPKGETGNTGPPGPPGQDGAHGKRGPAGPKGEEGKPGIQ 766

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G PGP+G+ G EG +G  G+ G+PGP G   + G++GPKG+   PG+ GLDG+ G  G P
Sbjct: 767 GAPGPRGVAGPEGPKGSPGNPGFPGPNG---ESGEQGPKGE---PGKDGLDGKAGETGLP 820

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------GMTGPRGNRGKSGINGVP 259
           G  G PG+ G+ G PGK G  G  G+ G  G  G+K      G+ GP+G  G  G++G  
Sbjct: 821 GEAGAPGKMGLPGSPGKPGPEGPAGVQGNTGQPGDKGDIGIQGLPGPQGAPGDQGVHGPQ 880

Query: 260 GTPAICAYKRESCSLLPNSETSQLLIP 286
           G P +      +  + P  +  +   P
Sbjct: 881 GPPGLRGSPGPAGDVGPPGKPGKAGNP 907



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 95/188 (50%), Gaps = 39/188 (20%)

Query: 112 PGLQGPIGQKGEIGAKG---------EMGVKGERGEKGAPGVVGPPGPQGIPGD------ 156
           PG  G  G+KG+ G KG         E G  G +G +G PG  GP GPQG  G+      
Sbjct: 679 PGPGGTKGEKGDFGQKGPVGPPGTPGEQGATGTKGVQGLPGATGPEGPQGPKGETGNTGP 738

Query: 157 ---------EGKRGPKGD---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                     GKRGP G           G PGP+G+ G EG +G  G+ G+PG  G  G 
Sbjct: 739 PGPPGQDGAHGKRGPAGPKGEEGKPGIQGAPGPRGVAGPEGPKGSPGNPGFPGPNGESGE 798

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS----- 253
            G  GEPG DG+ G+ G  G+PG+ G PGK G+PG+ G  G +G  G +GN G+      
Sbjct: 799 QGPKGEPGKDGLDGKAGETGLPGEAGAPGKMGLPGSPGKPGPEGPAGVQGNTGQPGDKGD 858

Query: 254 -GINGVPG 260
            GI G+PG
Sbjct: 859 IGIQGLPG 866



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 80/149 (53%), Gaps = 18/149 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---GY 168
           PG  G  G+ GE G  GE G  G+ G  G+PG  GP GP G+ G+ G+ G KGD+   G 
Sbjct: 805 PGKDGLDGKAGETGLPGEAGAPGKMGLPGSPGKPGPEGPAGVQGNTGQPGDKGDIGIQGL 864

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PGPQG PGD+G  GP+G  G  G  G  G  G PG+PG  G PG NG  GI         
Sbjct: 865 PGPQGAPGDQGVHGPQGPPGLRGSPGPAGDVGPPGKPGKAGNPGPNGEAGI--------- 915

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                  G  G++G  GP+G+RG+ G  G
Sbjct: 916 ------RGEKGDRGRRGPKGHRGELGAAG 938



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 84/186 (45%), Gaps = 15/186 (8%)

Query: 113 GLQGPIGQKGE------IGAKGEMGVKGERGEKGAPGVVGPPGP---------QGIPGDE 157
           G +GP G KGE       GA G  GV G  G KG+PG  G PGP         +G PG +
Sbjct: 749 GKRGPAGPKGEEGKPGIQGAPGPRGVAGPEGPKGSPGNPGFPGPNGESGEQGPKGEPGKD 808

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G  G+ G PG  G PG  G  G  G  G  G  G+ G  G PG+ G  GI G  G  
Sbjct: 809 GLDGKAGETGLPGEAGAPGKMGLPGSPGKPGPEGPAGVQGNTGQPGDKGDIGIQGLPGPQ 868

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G PG  G+ G  G PG  G+ G  G  GP G  GK+G  G  G   I   K +     P 
Sbjct: 869 GAPGDQGVHGPQGPPGLRGSPGPAGDVGPPGKPGKAGNPGPNGEAGIRGEKGDRGRRGPK 928

Query: 278 SETSQL 283
               +L
Sbjct: 929 GHRGEL 934



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 83/164 (50%), Gaps = 18/164 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP+G  G  G KG+ G +G  GEKG  G  G  G +G  G +G+RGP+G  G  G +
Sbjct: 227 GAQGPVGFPGVRGPKGDQGARGPLGEKGDKGDKGHDGEKGDVGQKGERGPQGLQGTAGLE 286

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGR------------------DGLPGEPGLDGIPGRN 214
           G  G +G  GP+G+ G PG  G  G+                   G PG PG  G  G  
Sbjct: 287 GPEGPKGFEGPRGEAGPPGPTGEKGKLGVPGFPGYPGPPGEKGDKGTPGRPGTPGDKGDR 346

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G PG+ G  G  G  G+ G  G++G+TGP+G+ G+ G  G 
Sbjct: 347 GNTGTPGERGEQGPRGFRGSRGRTGKQGVTGPKGDTGQPGPPGT 390



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 94/196 (47%), Gaps = 33/196 (16%)

Query: 98  AMQGFCNSTKEYCP---PGLQGPI---GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
             +G   ST    P   PG++GP    G +G +G KG+ G KG  GEKG  G  G  GPQ
Sbjct: 218 GSKGDTGSTGAQGPVGFPGVRGPKGDQGARGPLGEKGDKGDKGHDGEKGDVGQKGERGPQ 277

Query: 152 GIPGDEGKRGPKGDMGYPGPQ---GIPGDEGKRG---------------PKGDMGYPGRI 193
           G+ G  G  GP+G  G+ GP+   G PG  G++G                KGD G PGR 
Sbjct: 278 GLQGTAGLEGPEGPKGFEGPRGEAGPPGPTGEKGKLGVPGFPGYPGPPGEKGDKGTPGRP 337

Query: 194 GLD------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMT 244
           G        G  G PGE G  G  G  G  G  GK G+ G     G PG  GT GE+G+ 
Sbjct: 338 GTPGDKGDRGNTGTPGERGEQGPRGFRGSRGRTGKQGVTGPKGDTGQPGPPGTIGERGLP 397

Query: 245 GPRGNRGKSGINGVPG 260
           G  G RG +G  G+PG
Sbjct: 398 GAEGVRGLTGQQGLPG 413



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 73/143 (51%), Gaps = 24/143 (16%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGP 183
           M ++G  G +G  G+ GP GP   PG EG++G  GD G PGP+G+      PG EGKR  
Sbjct: 1   MAMQGSPGPQGMTGIHGPTGP---PGSEGQKGEPGDTGEPGPRGLRGMMGLPGREGKR-- 55

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGT 237
                  GR G DG  G  G PG+ G  G  G+ G+PG+       G PG  G PG +G 
Sbjct: 56  -------GRPGRDGERGSTGPPGVKGEQGNQGLLGLPGEKGDRGEVGNPGDVGQPGHDGQ 108

Query: 238 NGEKGMTGPRGNRGKSGINGVPG 260
            GE G  G  G  G+ G  G PG
Sbjct: 109 QGEDGAAGLPGMPGEMGPRGFPG 131



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 80/154 (51%), Gaps = 18/154 (11%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGDMG 167
           +QG  G +G  G  G  G  G  G+KG PG  G PGP+G+      PG EGKRG  G  G
Sbjct: 3   MQGSPGPQGMTGIHGPTGPPGSEGQKGEPGDTGEPGPRGLRGMMGLPGREGKRGRPGRDG 62

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDG 224
             G  G PG +G++G +G +G PG  G  G  G PG   +PG DG  G +G  G+PG  G
Sbjct: 63  ERGSTGPPGVKGEQGNQGLLGLPGEKGDRGEVGNPGDVGQPGHDGQQGEDGAAGLPGMPG 122

Query: 225 LPGKDGIPGTNGTNG---------EKGMTGPRGN 249
             G  G PG  G  G          +G+TGP+GN
Sbjct: 123 EMGPRGFPGQRGFPGLPGPPGIPGSEGITGPKGN 156



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 73/135 (54%), Gaps = 15/135 (11%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEI---------GAKGEMGVKGERGEKGAPGVVGPPGP 150
           +GF     E  PPG   P G+KG++         G  GE G KG  G  G PG  G  G 
Sbjct: 292 KGFEGPRGEAGPPG---PTGEKGKLGVPGFPGYPGPPGEKGDKGTPGRPGTPGDKGDRGN 348

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G PG+ G++GP+   G+ G +G  G +G  GPKGD G PG  G  G  GLPG  G+ G+
Sbjct: 349 TGTPGERGEQGPR---GFRGSRGRTGKQGVTGPKGDTGQPGPPGTIGERGLPGAEGVRGL 405

Query: 211 PGRNGMDGIPGKDGL 225
            G+ G+ GI GKDG+
Sbjct: 406 TGQQGLPGIHGKDGV 420



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 84/175 (48%), Gaps = 48/175 (27%)

Query: 113 GLQGPIGQKGEIG------AKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGP- 162
           G +GP+G+KG+ G       KG++G KGERG +G     G+ GP GP+G  G  G+ GP 
Sbjct: 245 GARGPLGEKGDKGDKGHDGEKGDVGQKGERGPQGLQGTAGLEGPEGPKGFEGPRGEAGPP 304

Query: 163 -----------------------KGDMGYPGPQGIPGDEG------------KRGPKGDM 187
                                  KGD G PG  G PGD+G            ++GP+G  
Sbjct: 305 GPTGEKGKLGVPGFPGYPGPPGEKGDKGTPGRPGTPGDKGDRGNTGTPGERGEQGPRGFR 364

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNG 239
           G  GR G  G  G  G+ G  G PG  G  G+PG +   GL G+ G+PG +G +G
Sbjct: 365 GSRGRTGKQGVTGPKGDTGQPGPPGTIGERGLPGAEGVRGLTGQQGLPGIHGKDG 419



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 69/135 (51%), Gaps = 6/135 (4%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           +G  G  G +G+ G+ G  G  G PG  G PG  G  GD G  G +G +G+PG +G  GD
Sbjct: 184 LGPPGTAGPRGKPGLPGLPGADGLPGPSGNPGTPGSKGDTGSTGAQGPVGFPGVRGPKGD 243

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
           +G RGP G+ G  G  G D      GE G  G  G  G  G+ G  GL G +G  G  G 
Sbjct: 244 QGARGPLGEKGDKGDKGHD------GEKGDVGQKGERGPQGLQGTAGLEGPEGPKGFEGP 297

Query: 238 NGEKGMTGPRGNRGK 252
            GE G  GP G +GK
Sbjct: 298 RGEAGPPGPTGEKGK 312



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 83/171 (48%), Gaps = 39/171 (22%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG +GP G +G  G    KG++G++G  G +GAPG  G  GPQG PG  G  GP GD+G 
Sbjct: 838  PGPEGPAGVQGNTGQPGDKGDIGIQGLPGPQGAPGDQGVHGPQGPPGLRGSPGPAGDVGP 897

Query: 169  P------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD----------------- 199
            P            G  GI G++G RG +G  G+ G +G  GR                  
Sbjct: 898  PGKPGKAGNPGPNGEAGIRGEKGDRGRRGPKGHRGELGAAGRKGEVGEKGEGGERGTQGP 957

Query: 200  -GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             G  GE G  G  G+ G DG     GLPG +G PG  G  G+   TGP+G+
Sbjct: 958  VGPKGEAGPLGPMGQKGNDGP---QGLPGLEGPPGPKGAEGQ---TGPKGD 1002



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 92/235 (39%), Gaps = 75/235 (31%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDMGYPGP- 171
           G KG  G  G  G KG+RG  G PG  G  GP+G  G  G+       GPKGD G PGP 
Sbjct: 329 GDKGTPGRPGTPGDKGDRGNTGTPGERGEQGPRGFRGSRGRTGKQGVTGPKGDTGQPGPP 388

Query: 172 -----QGIPGDEGKRGPKGDMGYPGRIGLDG---------------RDGLPGEPGLDGIP 211
                +G+PG EG RG  G  G PG  G DG                DG  G PG+ G+P
Sbjct: 389 GTIGERGLPGAEGVRGLTGQQGLPGIHGKDGVAGPPGERGPPGQPGADGPIGAPGVVGLP 448

Query: 212 GR------------------------------------------------NGMDGIPGKD 223
           G+                                                +G+ G PG+ 
Sbjct: 449 GQTGEGGPTGEPGEAGPPGAPGEPGHSGDAGKEGPQGPPGPQGKQGPIGPSGLPGFPGER 508

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
           GL G  G+PG  G  G  G  GP G++G+ G +G  G P       +  ++ P+ 
Sbjct: 509 GLAGLPGMPGLKGEMGPVGPAGPAGDKGQQGESGKEGPPGPEGRAGQQGAVGPSG 563



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 95/217 (43%), Gaps = 60/217 (27%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---P 154
             +G    T E  P GL+G +G  G  G +G  G  GERG  G PGV G  G QG+   P
Sbjct: 26  GQKGEPGDTGEPGPRGLRGMMGLPGREGKRGRPGRDGERGSTGPPGVKGEQGNQGLLGLP 85

Query: 155 GDEGKRGP---KGDMGYPG---------PQGIPGDEGKRGPKGDMGYPGRI--------- 193
           G++G RG     GD+G PG           G+PG  G+ GP+G   +PG+          
Sbjct: 86  GEKGDRGEVGNPGDVGQPGHDGQQGEDGAAGLPGMPGEMGPRG---FPGQRGFPGLPGPP 142

Query: 194 ------GLDGRDG---------------------------LPGEPGLDGIPGRNGMDGIP 220
                 G+ G  G                           + G PG  G  G+ G+ G+P
Sbjct: 143 GIPGSEGITGPKGNTGPSGGPGAPGQTGPNGPIGPPGPQGVLGPPGTAGPRGKPGLPGLP 202

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G DGLPG  G PGT G+ G+ G TG +G  G  G+ G
Sbjct: 203 GADGLPGPSGNPGTPGSKGDTGSTGAQGPVGFPGVRG 239



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 49/87 (56%), Gaps = 9/87 (10%)

Query: 124 IGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           IG  G  G  GERG  G PG+      +GP GP G  GD+G++G  G  G PGP+G  G 
Sbjct: 496 IGPSGLPGFPGERGLAGLPGMPGLKGEMGPVGPAGPAGDKGQQGESGKEGPPGPEGRAGQ 555

Query: 178 EGKRGP---KGDMGYPGRIGLDGRDGL 201
           +G  GP   KGD G PG  G  GRDGL
Sbjct: 556 QGAVGPSGAKGDTGDPGIPGPTGRDGL 582



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 84/205 (40%), Gaps = 57/205 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
           G QG  G KG+ G  G  G  GERG  GA GV G  G QG+PG  GK G           
Sbjct: 371 GKQGVTGPKGDTGQPGPPGTIGERGLPGAEGVRGLTGQQGLPGIHGKDGVAGPPGERGPP 430

Query: 162 ----PKGDMGYPGPQGIP---------------------------GDEGKR--------- 181
                 G +G PG  G+P                           GD GK          
Sbjct: 431 GQPGADGPIGAPGVVGLPGQTGEGGPTGEPGEAGPPGAPGEPGHSGDAGKEGPQGPPGPQ 490

Query: 182 ------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                 GP G  G+PG  GL G  G+PG  G  G  G  G  G  G+ G  GK+G PG  
Sbjct: 491 GKQGPIGPSGLPGFPGERGLAGLPGMPGLKGEMGPVGPAGPAGDKGQQGESGKEGPPGPE 550

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G++G  GP G +G +G  G+PG
Sbjct: 551 GRAGQQGAVGPSGAKGDTGDPGIPG 575



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 82/195 (42%), Gaps = 63/195 (32%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++G  G +G +G  GE   KG+RGE G PG VG PG  G  G++G  G  G  G  G
Sbjct: 69  PPGVKGEQGNQGLLGLPGE---KGDRGEVGNPGDVGQPGHDGQQGEDGAAGLPGMPGEMG 125

Query: 171 PQGIPGD---------------EGKRGPKGD---------------------------MG 188
           P+G PG                EG  GPKG+                           +G
Sbjct: 126 PRGFPGQRGFPGLPGPPGIPGSEGITGPKGNTGPSGGPGAPGQTGPNGPIGPPGPQGVLG 185

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP-- 246
            PG  G  G+ GLPG PG          DG+PG  G P   G PG+ G  G  G  GP  
Sbjct: 186 PPGTAGPRGKPGLPGLPG---------ADGLPGPSGNP---GTPGSKGDTGSTGAQGPVG 233

Query: 247 ----RGNRGKSGING 257
               RG +G  G  G
Sbjct: 234 FPGVRGPKGDQGARG 248


>gi|165881922|gb|ABY71227.1| Col1a1 [Scyliorhinus canicula]
          Length = 1237

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 88/169 (52%), Gaps = 27/169 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G KG  G  G  G KGE G KG PG VG    QG+PG  G+ G +G  G PG Q
Sbjct: 199 GAVGPSGPKGNTGEGGAPGSKGETGTKGEPGSVGV---QGLPGPAGEEGKRGARGEPGAQ 255

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------------PGLDGIPGRN 214
           G+PG  G+RG  G+ G+PG  GL G  G+PGE                  PG  G+PG  
Sbjct: 256 GLPGVSGERGGPGNRGFPGSEGLIGPKGVPGERGPGGPLGLKGATGEPGRPGEAGLPGAR 315

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
           G+ G PG    PG DG PG  G  G+ G  GP G+   RG+ G+ G PG
Sbjct: 316 GLTGSPGS---PGADGKPGPAGPTGQDGRAGPPGSAGPRGQPGVMGFPG 361



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 82/173 (47%), Gaps = 21/173 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G  G  G+ G+ G KG  G  G  G  G PGP+G  G +G  GP G  G  G  
Sbjct: 154 GPAGPTGAPGNAGSDGQAGAKGATGAPGMSGAPGFPGPRGPSGAQGAVGPSGPKGNTGEG 213

Query: 173 GIPGDEGKRGPKGD------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG +G+ G KG+       G PG  G +G+ G  GEPG  G+PG +G  G PG  G P
Sbjct: 214 GAPGSKGETGTKGEPGSVGVQGLPGPAGEEGKRGARGEPGAQGLPGVSGERGGPGNRGFP 273

Query: 227 GKDGIPGTNGTNGEK---------------GMTGPRGNRGKSGINGVPGTPAI 264
           G +G+ G  G  GE+               G  G  G  G  G+ G PG+P  
Sbjct: 274 GSEGLIGPKGVPGERGPGGPLGLKGATGEPGRPGEAGLPGARGLTGSPGSPGA 326



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 84/178 (47%), Gaps = 30/178 (16%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           E   PG QG     G+IGA G  G +GERG   E+GA G+ G PG +G  G  G  GPKG
Sbjct: 431 ESGKPGEQG---THGDIGAPGANGPRGERGFLGERGAAGITGAPGERGGVGSPGNDGPKG 487

Query: 165 DMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           D G PG    QG PG +G  G +G  G PG  G+ G     G  G DG PG++G  G+ G
Sbjct: 488 DAGAPGAPGSQGTPGIQGMPGDRGMSGLPGAKGVRGES---GPKGGDGAPGKDGGRGMTG 544

Query: 222 KDGLPGKDGIPGTN------------------GTNGEKGMTGPRGNRGKSGINGVPGT 261
             G PG  G PG                    G  GE G  GP G  G  G +G PG 
Sbjct: 545 AIGPPGHSGAPGEKGEAGPPGPSGPTGGRGAPGERGESGSPGPAGFAGPPGADGQPGA 602



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 82/189 (43%), Gaps = 45/189 (23%)

Query: 111 PPGLQGPIGQKGEIGAKGEMG------------------------------VKGERGEKG 140
           P G  GP G  G+ GAKGE+G                               KG RG  G
Sbjct: 587 PAGFAGPPGADGQPGAKGEVGDSGPKGDHGPQGAIGAVGIAGPTGPAGPPGSKGARGAPG 646

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           +PG  G P   G  G  G  GP G+ G   P G  G EG +G +G+ G  GR        
Sbjct: 647 SPGATGFP---GAAGRVGPPGPSGNTGPSAPAGAVGKEGAKGIRGETGSAGR-------- 695

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGING 257
            PGEPG  G PG  G  G PG DG PG  GIPG  G  G +   GM+G RG RG  G++G
Sbjct: 696 -PGEPGNVGAPGPAGEKGSPGSDGPPGASGIPGPQGITGMRGIVGMSGVRGERGSMGLSG 754

Query: 258 VPGTPAICA 266
             G P    
Sbjct: 755 KTGEPGKAG 763



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 78/168 (46%), Gaps = 24/168 (14%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGPPGPQGIP 154
           GF  +     PPG  G  G     GA G+ G KG RGE G+      PG VG PGP G  
Sbjct: 652 GFPGAAGRVGPPGPSGNTGPSAPAGAVGKEGAKGIRGETGSAGRPGEPGNVGAPGPAGEK 711

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG-------- 206
           G  G  GP G  G PGPQGI G  G  G  G  G  G +GL G+ G PG+ G        
Sbjct: 712 GSPGSDGPPGASGIPGPQGITGMRGIVGMSGVRGERGSMGLSGKTGEPGKAGPVGAPGDR 771

Query: 207 ----------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                     L G  G +G +G PG +G PG+DG  G  G  GE G +
Sbjct: 772 GPPGPMGPPGLAGPSGESGREGAPGAEGAPGRDGASGPKGDRGEPGTS 819



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 94/221 (42%), Gaps = 41/221 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDM 166
           G+ G  G++G +G+ G  G KG+ G  GAPG  G PG QG+PGD       G +G +G+ 
Sbjct: 466 GITGAPGERGGVGSPGNDGPKGDAGAPGAPGSQGTPGIQGMPGDRGMSGLPGAKGVRGES 525

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------GLPGEPGLDGIP 211
           G  G  G PG +G RG  G +G PG  G  G                 G PGE G  G P
Sbjct: 526 GPKGGDGAPGKDGGRGMTGAIGPPGHSGAPGEKGEAGPPGPSGPTGGRGAPGERGESGSP 585

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI---------------N 256
           G  G  G PG DG PG     G  G +G KG  GP+G  G  GI                
Sbjct: 586 GPAGFAGPPGADGQPGAK---GEVGDSGPKGDHGPQGAIGAVGIAGPTGPAGPPGSKGAR 642

Query: 257 GVPGTPAICAYKRESCSLLPNSETSQL--LIPPTIVGSEHI 295
           G PG+P    +   +  + P   +       P   VG E  
Sbjct: 643 GAPGSPGATGFPGAAGRVGPPGPSGNTGPSAPAGAVGKEGA 683



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/136 (43%), Positives = 70/136 (51%), Gaps = 12/136 (8%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           GA GE G  GE+G  G  G  G  GP+G  G  G+RG  G  G PG +G  G  G  GPK
Sbjct: 427 GAPGESGKPGEQGTHGDIGAPGANGPRGERGFLGERGAAGITGAPGERGGVGSPGNDGPK 486

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK------DGIPGTNGTN 238
           GD G PG  G        G PG+ G+PG  GM G+PG  G+ G+      DG PG +G  
Sbjct: 487 GDAGAPGAPGSQ------GTPGIQGMPGDRGMSGLPGAKGVRGESGPKGGDGAPGKDGGR 540

Query: 239 GEKGMTGPRGNRGKSG 254
           G  G  GP G+ G  G
Sbjct: 541 GMTGAIGPPGHSGAPG 556



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 80/177 (45%), Gaps = 30/177 (16%)

Query: 112 PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  GP G++G   E GA G  G  GERG  G+PG  GP G  G PG  G +G  G  G 
Sbjct: 447 PGANGPRGERGFLGERGAAGITGAPGERGGVGSPGNDGPKGDAGAPGAPGSQGTPGIQGM 506

Query: 169 PGPQ---GIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN-------- 214
           PG +   G+PG +G R   GPKG  G PG+ G  G  G  G PG  G PG          
Sbjct: 507 PGDRGMSGLPGAKGVRGESGPKGGDGAPGKDGGRGMTGAIGPPGHSGAPGEKGEAGPPGP 566

Query: 215 -------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                        G  G PG  G  G  G  G  G  GE G +GP+G+ G  G  G 
Sbjct: 567 SGPTGGRGAPGERGESGSPGPAGFAGPPGADGQPGAKGEVGDSGPKGDHGPQGAIGA 623



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 68/140 (48%), Gaps = 18/140 (12%)

Query: 139 KGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYPGPQGIPGDEGKRGPK----------- 184
           +G PG  GP GP G PG+   +G+ G KG  G PG  G PG  G RGP            
Sbjct: 147 RGEPGAAGPAGPTGAPGNAGSDGQAGAKGATGAPGMSGAPGFPGPRGPSGAQGAVGPSGP 206

Query: 185 ----GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
               G+ G PG  G  G  G PG  G+ G+PG  G +G  G  G PG  G+PG +G  G 
Sbjct: 207 KGNTGEGGAPGSKGETGTKGEPGSVGVQGLPGPAGEEGKRGARGEPGAQGLPGVSGERGG 266

Query: 241 KGMTGPRGNRGKSGINGVPG 260
            G  G  G+ G  G  GVPG
Sbjct: 267 PGNRGFPGSEGLIGPKGVPG 286



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 91/236 (38%), Gaps = 43/236 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--------------- 157
           GL G  G +GE G KG  G  G+ G +G  G +GPPG  G PG++               
Sbjct: 514 GLPGAKGVRGESGPKGGDGAPGKDGGRGMTGAIGPPGHSGAPGEKGEAGPPGPSGPTGGR 573

Query: 158 ---------GKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGL---------- 195
                    G  GP G  G PG  G PG +G+    GPKGD G  G IG           
Sbjct: 574 GAPGERGESGSPGPAGFAGPPGADGQPGAKGEVGDSGPKGDHGPQGAIGAVGIAGPTGPA 633

Query: 196 -----DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                 G  G PG PG  G PG  G  G PG  G  G     G  G  G KG+ G  G+ 
Sbjct: 634 GPPGSKGARGAPGSPGATGFPGAAGRVGPPGPSGNTGPSAPAGAVGKEGAKGIRGETGSA 693

Query: 251 GKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREG 306
           G+ G  G  G P     K    S  P    S +  P  I G   I   S +    G
Sbjct: 694 GRPGEPGNVGAPGPAGEKGSPGSDGPPG-ASGIPGPQGITGMRGIVGMSGVRGERG 748



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 79/180 (43%), Gaps = 48/180 (26%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG-----IP----GDEGKRGPKGDMGYPGPQGIP 175
           GA+G  G  G  G  GA G VGPPGP G      P    G EG +G +G+ G  G  G P
Sbjct: 640 GARGAPGSPGATGFPGAAGRVGPPGPSGNTGPSAPAGAVGKEGAKGIRGETGSAGRPGEP 699

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------PGKDGLP 226
           G+ G  GP G+ G PG  G  G  G+PG  G+ G+ G  GM G+          GK G P
Sbjct: 700 GNVGAPGPAGEKGSPGSDGPPGASGIPGPQGITGMRGIVGMSGVRGERGSMGLSGKTGEP 759

Query: 227 GK------------------------------DGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           GK                              +G PG  G  G  G +GP+G+RG+ G +
Sbjct: 760 GKAGPVGAPGDRGPPGPMGPPGLAGPSGESGREGAPGAEGAPGRDGASGPKGDRGEPGTS 819



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 6/119 (5%)

Query: 164 GDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG QG  GD    G  GP+G+ G+ G  G  G  G PGE G  G PG +G  G  
Sbjct: 430 GESGKPGEQGTHGDIGAPGANGPRGERGFLGERGAAGITGAPGERGGVGSPGNDGPKGDA 489

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           G  G PG  G PG  G  G++GM+   G +G RG+SG  G  G P     +  + ++ P
Sbjct: 490 GAPGAPGSQGTPGIQGMPGDRGMSGLPGAKGVRGESGPKGGDGAPGKDGGRGMTGAIGP 548



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 79/197 (40%), Gaps = 51/197 (25%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------KR 160
           G++G  G  G  G  G +G  G  GEKG+PG  GPPG  GIPG +G             R
Sbjct: 685 GIRGETGSAGRPGEPGNVGAPGPAGEKGSPGSDGPPGASGIPGPQGITGMRGIVGMSGVR 744

Query: 161 GPKGDMGYPGPQGIPGDEG---------------------KRGPKGDMGYPGRIGLDGRD 199
           G +G MG  G  G PG  G                       G  G  G PG  G  GRD
Sbjct: 745 GERGSMGLSGKTGEPGKAGPVGAPGDRGPPGPMGPPGLAGPSGESGREGAPGAEGAPGRD 804

Query: 200 GLPGEPGLDGIPG------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G  G  G  G PG                   +G +G  G+ G  G  G  G  G  G  
Sbjct: 805 GASGPKGDRGEPGTSGIPGAPGAPGAPGPVGPSGKNGDRGEAGPSGPAGPSGPMGPRGPL 864

Query: 242 GMTGPRGNRGKSGINGV 258
           G  GPRG+RG+SG  G+
Sbjct: 865 GAVGPRGDRGESGEAGL 881



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 3/82 (3%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G PGD G  GP+G  G+PG  G+PG +G RG  G  G  G  G  G  G  G PG +G P
Sbjct: 16  GRPGDRGAPGPQGARGFPGTPGLPGIKGHRGYNGLDGAKGDSGPAGPKGETGSPGENGSP 75

Query: 212 GRNGMDGIPGKDGLPGKDGIPG 233
           G  G  G+PG+ G   + G PG
Sbjct: 76  GAMGARGVPGERG---RSGAPG 94



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 15/99 (15%)

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+ G  GP G  G PG  G DG+ G              G  G PG  G P   G PG  
Sbjct: 148 GEPGAAGPAGPTGAPGNAGSDGQAGA------------KGATGAPGMSGAP---GFPGPR 192

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G +G +G  GP G +G +G  G PG+      K E  S+
Sbjct: 193 GPSGAQGAVGPSGPKGNTGEGGAPGSKGETGTKGEPGSV 231



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 49/94 (52%), Gaps = 6/94 (6%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDMGYP 169
           GP G+ G+ G  G+ G  G+RG  G  G  G PG  G+PG +G RG       KGD G  
Sbjct: 1   GPPGKNGDDGEHGKAGRPGDRGAPGPQGARGFPGTPGLPGIKGHRGYNGLDGAKGDSGPA 60

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           GP+G  G  G+ G  G MG  G  G  GR G PG
Sbjct: 61  GPKGETGSPGENGSPGAMGARGVPGERGRSGAPG 94



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 54/118 (45%), Gaps = 21/118 (17%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER------------GEKGAPGVV 145
             QG    + E   PG +G  G +G IG KG   V GER            GE G PG  
Sbjct: 253 GAQGLPGVSGERGGPGNRGFPGSEGLIGPKG---VPGERGPGGPLGLKGATGEPGRPGEA 309

Query: 146 GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           G PG +G+      PG +GK GP G  G  G  G PG  G RG  G MG+PG  G  G
Sbjct: 310 GLPGARGLTGSPGSPGADGKPGPAGPTGQDGRAGPPGSAGPRGQPGVMGFPGPKGAAG 367


>gi|149032176|gb|EDL87088.1| procollagen, type II, alpha 1, isoform CRA_a [Rattus norvegicus]
 gi|149032177|gb|EDL87089.1| procollagen, type II, alpha 1, isoform CRA_a [Rattus norvegicus]
          Length = 1326

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 92/198 (46%), Gaps = 33/198 (16%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKG+ G  G++G+ GAPG  GP   PGP
Sbjct: 654 TGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGP 713

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP------------------------KGD 186
           QG  G  G +G +G  G PG  G PG  G+ GP                        +GD
Sbjct: 714 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPAGPPGPAGKDGPKGARGD 773

Query: 187 MGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G PGR    GL G  G PGE G  G  G +G DG PG  GL G+ GI G  G  GE+G 
Sbjct: 774 TGAPGRAGDPGLQGPAGAPGEKGEPGDDGPSGSDGPPGPQGLAGQRGIVGLPGQRGERGF 833

Query: 244 TGPRGNRGKSGINGVPGT 261
            G  G  G+ G  G PG 
Sbjct: 834 PGLPGPSGEPGKQGAPGA 851



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 88/187 (47%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              GD+G+ G KGD 
Sbjct: 640 GEKGEVGPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDA 699

Query: 167 GYPGPQ---GIPGDE------------GKRGPKGDMGYP---GRIGLDG----------- 197
           G PGPQ   G PG +            G +GP G  G+P   GR+G  G           
Sbjct: 700 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPAGPP 759

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ 
Sbjct: 760 GPAGKDGPKGARGDTGAPGRAGDPGLQGPAGAPGEKGEPGDDGPSGSDGPPGPQGLAGQR 819

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 820 GIVGLPG 826



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 88/190 (46%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPK--------- 163
           GP+G KG+ G  G  G KGE+G KG     GP GPQG P   G+EGKRG +         
Sbjct: 286 GPLGPKGQTGEPGIAGFKGEQGPKG---ETGPAGPQGAPGPAGEEGKRGARGEPGGAGPI 342

Query: 164 ---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMD 217
              G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ 
Sbjct: 343 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLT 402

Query: 218 GIPG---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG                             G PG  G PG  G NGE G  G +G  
Sbjct: 403 GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLA 462

Query: 251 GKSGINGVPG 260
           G  G+ G+PG
Sbjct: 463 GAPGLRGLPG 472



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 85/190 (44%), Gaps = 48/190 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------------PQGI 153
           PG QGP G  G  GA+G  G  G  G  GA G VGPPG                  P+G 
Sbjct: 711 PGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPAGPPGPAGKDGPKGA 770

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDG---LPGEPGL 207
            GD G  G  GD G  GP G PG++G+    GP G  G PG  GL G+ G   LPG+ G 
Sbjct: 771 RGDTGAPGRAGDPGLQGPAGAPGEKGEPGDDGPSGSDGPPGPQGLAGQRGIVGLPGQRGE 830

Query: 208 DGIPGRNGMDGIPGKDGLPG------------------------KDGIPGTNGTNGEKGM 243
            G PG  G  G PGK G PG                        ++G PG +G  G  G 
Sbjct: 831 RGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGA 890

Query: 244 TGPRGNRGKS 253
            G +G+RG++
Sbjct: 891 AGVKGDRGET 900



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 214 GEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 273

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 274 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGAR 333

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 334 GEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 390

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 391 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 419



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 589 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 642

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 643 GEVGPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQK---GDA 699

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 700 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 742



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 527 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPG 586

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 587 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 646

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 647 PPGPSGSTGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKG 697

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 698 DAGAPGPQGPSGAPG 712



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 84/206 (40%), Gaps = 48/206 (23%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG- 158
           QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG  G  G  G 
Sbjct: 690 QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 749

Query: 159 --------------KRGPK---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                         K GPK   GD G PG  G PG +G  G  G+ G PG  G  G DG 
Sbjct: 750 NGNPGPAGPPGPAGKDGPKGARGDTGAPGRAGDPGLQGPAGAPGEKGEPGDDGPSGSDGP 809

Query: 202 PGEPGLD------GIPGR---NGMDGIPGKDGLPGKDGIPGTN----------------- 235
           PG  GL       G+PG+    G  G+PG  G PGK G PG +                 
Sbjct: 810 PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 869

Query: 236 ----GTNGEKGMTGPRGNRGKSGING 257
               G  G  G  GP G  G +G+ G
Sbjct: 870 AGEPGREGSPGADGPPGRDGAAGVKG 895



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 553 GLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGP---------- 602

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 603 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGARGAP 660

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 661 GERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQG 715



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 90/199 (45%), Gaps = 30/199 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 587 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 646

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGRIG 194
            PG  G  G +G PG+ G+ GP G  G+ GP G        GD+G+ G KGD G PG  G
Sbjct: 647 PPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 706

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---------G 245
             G  G  G  G+ G  G  G  G PG  G PG  G  G  G+NG  G           G
Sbjct: 707 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPAGPPGPAGKDG 766

Query: 246 PRGNRGKSGINGVPGTPAI 264
           P+G RG +G  G  G P +
Sbjct: 767 PKGARGDTGAPGRAGDPGL 785



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 95/213 (44%), Gaps = 45/213 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P GL GP G  G+ G  GE G+ G RG  G PG  GP   QG  G  
Sbjct: 361 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGP---QGKVGPS 417

Query: 158 GK---------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG-- 200
           G                RG  G MG+PGP+G  G+ GK G KG  G PG  GL G+DG  
Sbjct: 418 GAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGET 477

Query: 201 ----------LPGEPGLDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTN 238
                       GE G  G PG +G  G+PG              G+PG+ G PG  G  
Sbjct: 478 GAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPR 537

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYK 268
           GE+G  G RG+ G  G+    G+PGTP     K
Sbjct: 538 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPK 570



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 526 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPP 585

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 586 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 645

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 646 GPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEA 693



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 76/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G       +G PG+ G  GP G  G PG  GIPG +G       
Sbjct: 213 KGEAGPTGARGPEGAQGS------RGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 266

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GE    G  G PG  G 
Sbjct: 267 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGE 326

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 327 EGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 386

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 387 PGRPGEPGLPGAR 399



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 90/226 (39%), Gaps = 84/226 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------KGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+ G             +G+ 
Sbjct: 436 GQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQ 495

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QGIPG+ G  G   P+G+ G+PG        GL 
Sbjct: 496 GAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 555

Query: 197 GRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GKD 223
           G  GLPG PG D                     G+PG  G  GI             G +
Sbjct: 556 GPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 615

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 616 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGARGAPG 661



 Score = 46.2 bits (108), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 83/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 123 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 182

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +G +G+ G PG  G 
Sbjct: 183 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGP 242

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 243 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 299

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 300 AGFKGEQGPKGETGPAGPQGAPG-PAGEEGKR 330



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 43/85 (50%), Gaps = 12/85 (14%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ GK G  G+ G PGPQG              G+PG  GL G  G  G PGLDG  G  
Sbjct: 94  GEAGKPGKAGERGLPGPQGA------------RGFPGTPGLPGVKGHRGYPGLDGAKGEA 141

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNG 239
           G  G+ G+ G PG++G PG  G  G
Sbjct: 142 GAPGVKGESGSPGENGSPGPMGPRG 166



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 43/80 (53%), Gaps = 9/80 (11%)

Query: 152 GIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G PG  G+RG   P+G  G+PG  G+PG +G R      GYPG  G  G  G PG  G  
Sbjct: 97  GKPGKAGERGLPGPQGARGFPGTPGLPGVKGHR------GYPGLDGAKGEAGAPGVKGES 150

Query: 209 GIPGRNGMDGIPGKDGLPGK 228
           G PG NG  G  G  GLPG+
Sbjct: 151 GSPGENGSPGPMGPRGLPGE 170



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 83/230 (36%), Gaps = 75/230 (32%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGYPGPQGI 174
           +G+ G+ G  GE G+ G +G +G PG  G PG    +G PG +G +G  G  G  G  G 
Sbjct: 93  LGEAGKPGKAGERGLPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGS 152

Query: 175 PGDEGKRGPKGDMGYP-------------------------------------------- 190
           PG+ G  GP G  G P                                            
Sbjct: 153 PGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGA 212

Query: 191 -GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------ 243
            G  G  G  G  G  G  G PG  G  G  G  G PG DGIPG  G+ G  G+      
Sbjct: 213 KGEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGF 272

Query: 244 ------------TGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
                       TGP G +G++      G P I  +K E     P  ET 
Sbjct: 273 PGPRGPPGPQGATGPLGPKGQT------GEPGIAGFKGEQG---PKGETG 313



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 83/216 (38%), Gaps = 54/216 (25%)

Query: 89  NAYSRIPLVAMQGFCNSTKEYC------PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP 142
            A  R     +QG   +  E        P G  GP G +G  G +G +G+ G+RGE+G P
Sbjct: 775 GAPGRAGDPGLQGPAGAPGEKGEPGDDGPSGSDGPPGPQGLAGQRGIVGLPGQRGERGFP 834

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------DEGKRGPKGDMGYPGRI 193
           G+   PGP G PG                QG PG           G  G  G  G PGR 
Sbjct: 835 GL---PGPSGEPGK---------------QGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 876

Query: 194 GLDGRDGLPGEPGLDGIPGRNG---------------------MDGIPGKDGLPGKDGIP 232
           G  G DG PG  G  G+ G  G                       G  G  G  G  G  
Sbjct: 877 GSPGADGPPGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPM 936

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G +G  G +G+ GP+G RG  G  G PG   +  ++
Sbjct: 937 GPSGPAGARGIAGPQGPRGDKGEAGEPGERGLKGHR 972



 Score = 39.3 bits (90), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           ++G  G+ G  G  GLPG  G  G PG  G+ G+ G  G PG D      G  GE G  G
Sbjct: 92  NLGEAGKPGKAGERGLPGPQGARGFPGTPGLPGVKGHRGYPGLD------GAKGEAGAPG 145

Query: 246 PRGNRGKSGINGVPG 260
            +G  G  G NG PG
Sbjct: 146 VKGESGSPGENGSPG 160


>gi|344274757|ref|XP_003409181.1| PREDICTED: collagen alpha-1(XVII) chain-like [Loxodonta africana]
          Length = 1479

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 84/199 (42%), Gaps = 59/199 (29%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP---GPQGIPGD 177
           +G  G KG+MG +G +G++G PG  G PG  G PG EG +G KG +G P   GP G+ G 
Sbjct: 559 RGSPGPKGDMGSQGPKGDRGLPGTPGIPGLLGHPGPEGPKGQKGSVGEPGMEGPMGLRGR 618

Query: 178 EGKRGPKGDMGYPG-----------------------------------------RIGLD 196
           EG  G +GD G PG                                          IGL 
Sbjct: 619 EGPPGHRGDPGPPGFGEKGDRGPTGEPGPQGPPGVPGSVGPKGSSGSPGPQGPPGAIGLQ 678

Query: 197 GRDGLPGEPGLD---------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G  G  G PG+                G  G  G+ G PG  GLPG  G PG  G  G  
Sbjct: 679 GLQGEVGLPGVKGDKGPMGPPGPKGDHGEKGSRGLTGEPGSRGLPGAVGEPGAKGAMGPA 738

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G  G +G RG+ G+ G+PG
Sbjct: 739 GPDGQQGPRGEQGLTGMPG 757



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 91/209 (43%), Gaps = 58/209 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PG +GP GQKG +G  G  G  G RG +G PG  G PGP G  G++G R           
Sbjct: 592 PGPEGPKGQKGSVGEPGMEGPMGLRGREGPPGHRGDPGPPGF-GEKGDRGPTGEPGPQGP 650

Query: 161 -------GPKGDM---------------GYPGPQGIPG---------------DEGKRGP 183
                  GPKG                 G  G  G+PG               D G++G 
Sbjct: 651 PGVPGSVGPKGSSGSPGPQGPPGAIGLQGLQGEVGLPGVKGDKGPMGPPGPKGDHGEKGS 710

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGE 240
           +G  G PG  GL G  G PG  G  G  G +G  G  G+ GL   PG  G PG +G  G+
Sbjct: 711 RGLTGEPGSRGLPGAVGEPGAKGAMGPAGPDGQQGPRGEQGLTGMPGIRGSPGPSGDPGK 770

Query: 241 KGMTGPRGNR------GKSGINGVPGTPA 263
            G+TGP+G +      G+ G+ G PG P 
Sbjct: 771 PGLTGPQGPQGLPGSPGQPGLKGEPGAPG 799



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 74/173 (42%), Gaps = 53/173 (30%)

Query: 111 PPGLQG--------------------PIGQK---------------GEIGAKGEMGVKGE 135
           PPG                        +G K               G  G +GE+G+ G 
Sbjct: 630 PPGFGEKGDRGPTGEPGPQGPPGVPGSVGPKGSSGSPGPQGPPGAIGLQGLQGEVGLPGV 689

Query: 136 R---------------GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           +               GEKG+ G+ G PG +G+PG  G+ G KG MG  GP    G +G 
Sbjct: 690 KGDKGPMGPPGPKGDHGEKGSRGLTGEPGSRGLPGAVGEPGAKGAMGPAGPD---GQQGP 746

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
           RG +G  G PG  G  G  G PG+PGL G  G  G+ G PG+ GL G+ G PG
Sbjct: 747 RGEQGLTGMPGIRGSPGPSGDPGKPGLTGPQGPQGLPGSPGQPGLKGEPGAPG 799


>gi|328782948|ref|XP_392096.4| PREDICTED: collagen alpha-1(IV) chain-like [Apis mellifera]
          Length = 1836

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 91/180 (50%), Gaps = 16/180 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL    G++G IG  G  G+KG+RG  G PG +G PG   +PGD+G RG  G MG PGP
Sbjct: 1132 PGLHAVKGERGPIGPPGIEGLKGKRGLDGDPGRMGLPG---MPGDQGHRGSPGLMGAPGP 1188

Query: 172  QGIPGDEG----KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---IPGKDG 224
            +G  G+ G         GD G PG  GL G  G  GE G  G+PGR GM G     G DG
Sbjct: 1189 KGYVGEPGLPSYGEAEGGDFGMPGLNGLPGEKGERGEQGFVGLPGRKGMKGNIGYRGPDG 1248

Query: 225  LPGKDGIPGTNGTNGEKGMTG------PRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
             PG  G PG  G  G  G  G        G  G+ G++G+PGTP I   K       PN 
Sbjct: 1249 FPGVPGFPGLPGDEGPPGFPGISGQFAEAGEDGRPGMDGIPGTPGIPGQKGAPGEYGPNG 1308



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 100/199 (50%), Gaps = 45/199 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEG----KRGPK 163
            PPG++G  G++G  G  G MG+ G   ++G +G+PG++G PGP+G  G+ G         
Sbjct: 1146 PPGIEGLKGKRGLDGDPGRMGLPGMPGDQGHRGSPGLMGAPGPKGYVGEPGLPSYGEAEG 1205

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGLDGIPG----- 212
            GD G PG  G+PG++G+RG +G +G PGR      IG  G DG PG PG  G+PG     
Sbjct: 1206 GDFGMPGLNGLPGEKGERGEQGFVGLPGRKGMKGNIGYRGPDGFPGVPGFPGLPGDEGPP 1265

Query: 213  ----------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---------------- 246
                        G DG PG DG+PG  GIPG  G  GE G  GP                
Sbjct: 1266 GFPGISGQFAEAGEDGRPGMDGIPGTPGIPGQKGAPGEYGPNGPIGITGDVGFSIRGPKG 1325

Query: 247  -RGNRGKSGINGVPGTPAI 264
              G+ G  G +G PG P +
Sbjct: 1326 LAGDMGPRGFDGYPGAPGL 1344



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 94/193 (48%), Gaps = 31/193 (16%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------PPG 149
            L    G   S   +   G +GPIG  G  G KG+ G+ G+ G  G PG+ G       PG
Sbjct: 1122 LKGRPGIPGSPGLHAVKGERGPIGPPGIEGLKGKRGLDGDPGRMGLPGMPGDQGHRGSPG 1181

Query: 150  PQGIPGDEGKRG----------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------I 193
              G PG +G  G            GD G PG  G+PG++G+RG +G +G PGR      I
Sbjct: 1182 LMGAPGPKGYVGEPGLPSYGEAEGGDFGMPGLNGLPGEKGERGEQGFVGLPGRKGMKGNI 1241

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIP---------GKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G DG PG PG  G+PG  G  G P         G+DG PG DGIPGT G  G+KG  
Sbjct: 1242 GYRGPDGFPGVPGFPGLPGDEGPPGFPGISGQFAEAGEDGRPGMDGIPGTPGIPGQKGAP 1301

Query: 245  GPRGNRGKSGING 257
            G  G  G  GI G
Sbjct: 1302 GEYGPNGPIGITG 1314



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 96/176 (54%), Gaps = 20/176 (11%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGI 174
            +G+ GE G +G +G++G  G  GA G  G  GP GIPG  G  G KG  G PGP    G+
Sbjct: 974  VGEIGEPGPRGWLGLEGLSGPMGAKGEQGDVGPVGIPGIVGLPGSKGISGDPGPVGLDGL 1033

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR-----------NGMDGIPGKD 223
            PG+    GP+GD+G PG +G     G PG PG+DG PG            NG+ G  G+ 
Sbjct: 1034 PGENAFSGPQGDIGEPGFMG---EVGAPGLPGMDGRPGLPGEPGLATDGFNGLRGEKGEA 1090

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRESCSLLP 276
            G+ G +G+PG  G  G+ G+ G +G RG  G+    G+PG+P + A K E   + P
Sbjct: 1091 GINGLNGLPGPKGEIGDMGLDGLKGARGDWGLKGRPGIPGSPGLHAVKGERGPIGP 1146



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 96/207 (46%), Gaps = 62/207 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV-----------KGERGEKGAPGVVGPPGPQGIPGDEG-- 158
           PGL+GP G KG   AKGE G+           KG +GE+G PG  G  GP+G PGDEG  
Sbjct: 713 PGLRGPPGDKG---AKGERGISSQYNIQLKGEKGYKGERGDPGEDGAKGPEGWPGDEGFI 769

Query: 159 ------------KRGPKGDMGYPGPQGIPGDEGKRGPKGD------MGYPGRIGLDGRDG 200
                       ++GP G  GYPG   +PGD+G RG  G       +G+PGR+G  G  G
Sbjct: 770 GPSGIPGSPGISRQGPVGLKGYPG---MPGDQGPRGAPGTPGSEGFVGFPGRVGNKGDRG 826

Query: 201 LPGE------------------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
            PG                          G  G PG +G  G  G  G PG  GIPG  G
Sbjct: 827 DPGSNQTYGDYGLMGWTGEKGNVGDAGPMGYRGRPGPDGTKGAKGSKGAPGSAGIPGLQG 886

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G++G    +G++G  GI+G PG P 
Sbjct: 887 VKGQRGDR-VQGSKGMPGIHGQPGMPG 912



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 93/179 (51%), Gaps = 17/179 (9%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            +V + G    + +  P GL G  G+    G +G++G  G  GE GAPG+ G  G  G+PG
Sbjct: 1012 IVGLPGSKGISGDPGPVGLDGLPGENAFSGPQGDIGEPGFMGEVGAPGLPGMDGRPGLPG 1071

Query: 156  D--------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRDGL 201
            +         G RG KG+ G  G  G+PG +G+    GDMG  G        GL GR G+
Sbjct: 1072 EPGLATDGFNGLRGEKGEAGINGLNGLPGPKGE---IGDMGLDGLKGARGDWGLKGRPGI 1128

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG PGL  + G  G  G PG +GL GK G+ G  G  G  GM G +G+RG  G+ G PG
Sbjct: 1129 PGSPGLHAVKGERGPIGPPGIEGLKGKRGLDGDPGRMGLPGMPGDQGHRGSPGLMGAPG 1187



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 87/180 (48%), Gaps = 28/180 (15%)

Query: 90  AYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER------------- 136
             SR   V ++G+     +  P G  G  G +G +G  G +G KG+R             
Sbjct: 779 GISRQGPVGLKGYPGMPGDQGPRGAPGTPGSEGFVGFPGRVGNKGDRGDPGSNQTYGDYG 838

Query: 137 -----GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
                GEKG  G  GP G +G PG +G +G KG  G PG  GIPG +G +G +GD     
Sbjct: 839 LMGWTGEKGNVGDAGPMGYRGRPGPDGTKGAKGSKGAPGSAGIPGLQGVKGQRGDR---- 894

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              + G  G+PG  G  G+PGR G  GIPG DG  G DG+    G  GE G  G RG+ G
Sbjct: 895 ---VQGSKGMPGIHGQPGMPGRMGEVGIPGPDGTLGFDGM---KGLKGEIGFMGRRGDDG 948



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 80/158 (50%), Gaps = 19/158 (12%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + GF     +  PPG  G  GQ  E G  G  G+ G  G  G PG       +G PG+ 
Sbjct: 1251 GVPGFPGLPGDEGPPGFPGISGQFAEAGEDGRPGMDGIPGTPGIPGQ------KGAPGEY 1304

Query: 158  GKRGP---KGDMGYP--GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            G  GP    GD+G+   GP+G+ GD    GP+G  GYPG  GL G   LPG PG  G PG
Sbjct: 1305 GPNGPIGITGDVGFSIRGPKGLAGD---MGPRGFDGYPGAPGLQGMPSLPGLPGPKGYPG 1361

Query: 213  RNGMDGI-----PGKDGLPGKDGIPGTNGTNGEKGMTG 245
              G+ GI      G+ GL G DG PGT G  G+ G++G
Sbjct: 1362 EIGLPGISIKGESGERGLDGFDGRPGTKGIRGDSGLSG 1399



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 91/176 (51%), Gaps = 15/176 (8%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIG--AKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            +   GF         PG+ G  G  GE G    G  G++GE+GE G  G+ G PGP+G  
Sbjct: 1046 IGEPGFMGEVGAPGLPGMDGRPGLPGEPGLATDGFNGLRGEKGEAGINGLNGLPGPKGEI 1105

Query: 155  GD---EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            GD   +G +G +GD G  G  GIPG  G    KG+ G    IG  G +GL G+ GLDG P
Sbjct: 1106 GDMGLDGLKGARGDWGLKGRPGIPGSPGLHAVKGERGP---IGPPGIEGLKGKRGLDGDP 1162

Query: 212  GRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGM----TGPRGNRGKSGINGVPG 260
            GR G+ G+PG     G PG  G PG  G  GE G+        G+ G  G+NG+PG
Sbjct: 1163 GRMGLPGMPGDQGHRGSPGLMGAPGPKGYVGEPGLPSYGEAEGGDFGMPGLNGLPG 1218



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 96/198 (48%), Gaps = 49/198 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRG---- 161
            PGL G  G+KGE G +G +G+ G +G KG  G  GP      PG  G+PGDEG  G    
Sbjct: 1211 PGLNGLPGEKGERGEQGFVGLPGRKGMKGNIGYRGPDGFPGVPGFPGLPGDEGPPGFPGI 1270

Query: 162  ------------PK-----GDMGYPGPQGIPGDEGKRGP-----------KGDMGYPGRI 193
                        P      G  G PG +G PG+ G  GP           +G  G  G +
Sbjct: 1271 SGQFAEAGEDGRPGMDGIPGTPGIPGQKGAPGEYGPNGPIGITGDVGFSIRGPKGLAGDM 1330

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN--GTNGEKGM------TG 245
            G  G DG PG PGL G+P    + G+PG  G PG+ G+PG +  G +GE+G+       G
Sbjct: 1331 GPRGFDGYPGAPGLQGMP---SLPGLPGPKGYPGEIGLPGISIKGESGERGLDGFDGRPG 1387

Query: 246  PRGNRGKSGINGVPGTPA 263
             +G RG SG++G  G P 
Sbjct: 1388 TKGIRGDSGLSGFVGLPG 1405



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 90/194 (46%), Gaps = 52/194 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEK-------------------------------- 139
           PG++GP G +GE G +G+ G +G +GEK                                
Sbjct: 641 PGIEGPTGPRGEPGFRGDTGPEGPKGEKGELGPPGRPGGDGYPGINGIPGEKGDDASTPM 700

Query: 140 ----GAPGVVGPPGPQGIPGDEGKRGP-----------KGDMGYPGPQGIPGDEGKRGPK 184
               G PG  G PG +G PGD+G +G            KG+ GY G +G PG++G +GP+
Sbjct: 701 EFLKGEPGSPGIPGLRGPPGDKGAKGERGISSQYNIQLKGEKGYKGERGDPGEDGAKGPE 760

Query: 185 GDMGYPGRIGLDGRDGLPGEPGL--DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           G   +PG  G  G  G+PG PG+   G  G  G  G+PG  G  G  G PG+ G  G  G
Sbjct: 761 G---WPGDEGFIGPSGIPGSPGISRQGPVGLKGYPGMPGDQGPRGAPGTPGSEGFVGFPG 817

Query: 243 MTGPRGNRGKSGIN 256
             G +G+RG  G N
Sbjct: 818 RVGNKGDRGDPGSN 831



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 100/219 (45%), Gaps = 67/219 (30%)

Query: 112  PGLQGPIGQKGE--IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY- 168
            PGLQG  GQ+G+   G+KG  G+ G+ G  G  G VG PGP G  G +G +G KG++G+ 
Sbjct: 882  PGLQGVKGQRGDRVQGSKGMPGIHGQPGMPGRMGEVGIPGPDGTLGFDGMKGLKGEIGFM 941

Query: 169  --------------------------------------PGPQGIPGDEGKRGP---KGDM 187
                                                  PGP+G  G EG  GP   KG+ 
Sbjct: 942  GRRGDDGDIGPPGYLGRDGIPGLPGPPGPDGDVGEIGEPGPRGWLGLEGLSGPMGAKGEQ 1001

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---------------------GLP 226
            G  G +G+ G  GLPG  G+ G PG  G+DG+PG++                     GLP
Sbjct: 1002 GDVGPVGIPGIVGLPGSKGISGDPGPVGLDGLPGENAFSGPQGDIGEPGFMGEVGAPGLP 1061

Query: 227  GKDGIPGTNGTNG--EKGMTGPRGNRGKSGINGVPGTPA 263
            G DG PG  G  G    G  G RG +G++GING+ G P 
Sbjct: 1062 GMDGRPGLPGEPGLATDGFNGLRGEKGEAGINGLNGLPG 1100



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 72/154 (46%), Gaps = 32/154 (20%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKR--GPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
           G+PGD      +GD G  GP+G PG +G R  GP G+ G PG  GL G DG PG PGL G
Sbjct: 484 GLPGD------RGDPGVQGPKGFPG-KGSRNPGPPGERGLPGIPGLPGPDGWPGLPGLKG 536

Query: 210 I-----------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
           +                 PG  G  G  G DG PG  G PG  G  G KG+ G RG  G 
Sbjct: 537 VKGFKGDDCNCPPGMLLKPGPKGEQGDSGLDGYPGTPGYPGLPGPRGFKGVQGKRGIVGP 596

Query: 253 SGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
            G+ G  G P +   +       P  E  +L++P
Sbjct: 597 RGLEGDSGRPGVAGPQG------PKGERGRLIVP 624



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 94/207 (45%), Gaps = 57/207 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYP 169
            GL GP+G KGE G  G +G+ G  G  G+ G+ G PGP    G+PG+    GP+GD+G P
Sbjct: 990  GLSGPMGAKGEQGDVGPVGIPGIVGLPGSKGISGDPGPVGLDGLPGENAFSGPQGDIGEP 1049

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL--------------------DG 209
            G  G            ++G PG  G+DGR GLPGEPGL                    +G
Sbjct: 1050 GFMG------------EVGAPGLPGMDGRPGLPGEPGLATDGFNGLRGEKGEAGINGLNG 1097

Query: 210  IPGRNG------MDGI------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR- 250
            +PG  G      +DG+            PG  G PG   + G  G  G  G+ G +G R 
Sbjct: 1098 LPGPKGEIGDMGLDGLKGARGDWGLKGRPGIPGSPGLHAVKGERGPIGPPGIEGLKGKRG 1157

Query: 251  --GKSGINGVPGTPAICAYKRESCSLL 275
              G  G  G+PG P    + R S  L+
Sbjct: 1158 LDGDPGRMGLPGMPGDQGH-RGSPGLM 1183



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 73/143 (51%), Gaps = 21/143 (14%)

Query: 125 GAKGEMGVKGERGEKGAPGV----VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG- 179
           G  G+ G  G +G KG PG      GPPG +G+PG  G  GP G  G PG +G+ G +G 
Sbjct: 484 GLPGDRGDPGVQGPKGFPGKGSRNPGPPGERGLPGIPGLPGPDGWPGLPGLKGVKGFKGD 543

Query: 180 ----------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
                     K GPKG+ G        G DG PG PG  G+PG  G  G+ GK G+ G  
Sbjct: 544 DCNCPPGMLLKPGPKGEQGD------SGLDGYPGTPGYPGLPGPRGFKGVQGKRGIVGPR 597

Query: 230 GIPGTNGTNGEKGMTGPRGNRGK 252
           G+ G +G  G  G  GP+G RG+
Sbjct: 598 GLEGDSGRPGVAGPQGPKGERGR 620



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 61/109 (55%), Gaps = 3/109 (2%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           ++G  G KG  G  GE G KGE G KG  G  G  G +G  G++G  GP+G  G  GP  
Sbjct: 262 VKGATGPKGMRGDAGERGRKGEMGAKGPIGRAGFFGIKGTKGEQGDDGPRGKQGAEGP-- 319

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            PG  G++G KG  GY G+ G DG DG  G+ G  G PG+ G  G PGK
Sbjct: 320 -PGPAGEKGEKGAPGYAGKPGPDGFDGELGDGGNQGPPGKQGAPGEPGK 367



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 86/210 (40%), Gaps = 67/210 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------------- 152
           PGL GP G KG  G +G +G +G  G+ G PGV GP GP+G                   
Sbjct: 576 PGLPGPRGFKGVQGKRGIVGPRGLEGDSGRPGVAGPQGPKGERGRLIVPDKKIIGTPGDI 635

Query: 153 ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM------------------GYP 190
                PG EG  GP+G+ G+       GD G  GPKG+                   G P
Sbjct: 636 GDKGYPGIEGPTGPRGEPGF------RGDTGPEGPKGEKGELGPPGRPGGDGYPGINGIP 689

Query: 191 GRIG---------LDGRDGLPGEPGLDGIPGRNGMDG-----------IPGKDGLPGKDG 230
           G  G         L G  G PG PGL G PG  G  G           + G+ G  G+ G
Sbjct: 690 GEKGDDASTPMEFLKGEPGSPGIPGLRGPPGDKGAKGERGISSQYNIQLKGEKGYKGERG 749

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG +G  G +G  G  G  G SGI G PG
Sbjct: 750 DPGEDGAKGPEGWPGDEGFIGPSGIPGSPG 779



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 89/180 (49%), Gaps = 38/180 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G  GEIG  G + +KGE GE+G  G  G PG +GI GD G     G +G PG 
Sbjct: 1351 PGLPGPKGYPGEIGLPG-ISIKGESGERGLDGFDGRPGTKGIRGDSGL---SGFVGLPGA 1406

Query: 172  QGIPGDEGK------------------RGPKGDMGYPGRIGLDGRDGLPGE--------- 204
            +G PGD G+                  RG      +P       R GLPG+         
Sbjct: 1407 KGEPGDVGEPGIIGLPGPPGPKGPKGDRGMNPFSPFP-------RKGLPGDTGPPGLPGF 1459

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PGL G+ G  G DG+PG++G PG  G+PG  G  GE+G  G  G  G  G  G+PG+P I
Sbjct: 1460 PGLPGMLGEPGEDGLPGREGEPGMVGLPGLPGPEGEEGPAGYTGPPGVIGRQGLPGSPGI 1519



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 88/210 (41%), Gaps = 57/210 (27%)

Query: 112 PGLQGPIGQKGEIGA-----KGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPK 163
           PG+ GP G KGE G      K  +G  G+ G+KG PG+ GP GP+G PG   D G  GPK
Sbjct: 606 PGVAGPQGPKGERGRLIVPDKKIIGTPGDIGDKGYPGIEGPTGPRGEPGFRGDTGPEGPK 665

Query: 164 GDM------------------------------------GYPGPQGIPGDEGKRGPKGDM 187
           G+                                     G PG  GIP   G RGP GD 
Sbjct: 666 GEKGELGPPGRPGGDGYPGINGIPGEKGDDASTPMEFLKGEPGSPGIP---GLRGPPGDK 722

Query: 188 GYPGRIG--------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN- 238
           G  G  G        L G  G  GE G  G  G  G +G PG +G  G  GIPG+ G + 
Sbjct: 723 GAKGERGISSQYNIQLKGEKGYKGERGDPGEDGAKGPEGWPGDEGFIGPSGIPGSPGISR 782

Query: 239 -GEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G  G+ G  G  G  G  G PGTP    +
Sbjct: 783 QGPVGLKGYPGMPGDQGPRGAPGTPGSEGF 812



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 79/158 (50%), Gaps = 22/158 (13%)

Query: 136 RGEK------GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           RGE+      GA G+ G PG  G+ G +G  G  G  G  G  GIPG  G+RGP G MG 
Sbjct: 100 RGEQGIQGFPGAAGLPGKPGSPGVMGPDGLDGCNGTDGRAGSPGIPGVHGERGPPGPMGD 159

Query: 190 PGRIGLDGRDGL--PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG----- 242
            G IG  G  G+   G  G+ G PG NG++G PG  G+PG+ G PG  G  G +G     
Sbjct: 160 YGPIGEPGDGGINSVGVKGVRGNPGMNGLEGYPGSYGIPGEMGYPGETGDMGFRGSPGLP 219

Query: 243 ---------MTGPRGNRGKSGINGVPGTPAICAYKRES 271
                    + G +G  G+ G  G PG P+   +K ++
Sbjct: 220 GMQGDVGDTVYGIKGAEGEQGDRGEPGPPSNGEFKEKT 257



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QG  G +G+ GA+G  G  GE+GEKGAPG  G PGP G    +G+ G  G+ G PG Q
Sbjct: 303 GEQGDDGPRGKQGAEGPPGPAGEKGEKGAPGYAGKPGPDGF---DGELGDGGNQGPPGKQ 359

Query: 173 GIPGDEGK 180
           G PG+ GK
Sbjct: 360 GAPGEPGK 367



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 83/200 (41%), Gaps = 67/200 (33%)

Query: 112 PGLQGPIGQKGE-----------IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           PGL+G  G KG+            G KGE G  G  G  G PG  G PGP+G  G +GKR
Sbjct: 532 PGLKGVKGFKGDDCNCPPGMLLKPGPKGEQGDSGLDGYPGTPGYPGLPGPRGFKGVQGKR 591

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGD-----------MGYPGRI------GLDGRDGLPG 203
           G  G  G  G  G PG  G +GPKG+           +G PG I      G++G  G  G
Sbjct: 592 GIVGPRGLEGDSGRPGVAGPQGPKGERGRLIVPDKKIIGTPGDIGDKGYPGIEGPTGPRG 651

Query: 204 EPG------------------------------LDGIPGRNGMD---------GIPGKDG 224
           EPG                              ++GIPG  G D         G PG  G
Sbjct: 652 EPGFRGDTGPEGPKGEKGELGPPGRPGGDGYPGINGIPGEKGDDASTPMEFLKGEPGSPG 711

Query: 225 LPGKDGIPGTNGTNGEKGMT 244
           +PG  G PG  G  GE+G++
Sbjct: 712 IPGLRGPPGDKGAKGERGIS 731



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 73/148 (49%), Gaps = 15/148 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PGL GP G  G  G KG  G KG+      PG++  PGP+G  GD G  G  G  GYPG 
Sbjct: 520 PGLPGPDGWPGLPGLKGVKGFKGDDCNC-PPGMLLKPGPKGEQGDSGLDGYPGTPGYPGL 578

Query: 171 --PQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPG--------LDGIPGRNGMD 217
             P+G  G +GKRG   P+G  G  GR G+ G  G  GE G        + G PG  G  
Sbjct: 579 PGPRGFKGVQGKRGIVGPRGLEGDSGRPGVAGPQGPKGERGRLIVPDKKIIGTPGDIGDK 638

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           G PG +G  G  G PG  G  G +G  G
Sbjct: 639 GYPGIEGPTGPRGEPGFRGDTGPEGPKG 666


>gi|110629870|gb|ABG80451.1| fibrillar collagen, partial [Hydra vulgaris]
          Length = 1374

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/185 (42%), Positives = 97/185 (52%), Gaps = 24/185 (12%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGD 156
           QG      E   PGLQG IG  G+ G +G++G  G RGE GAPGV GP   PG  G PG 
Sbjct: 336 QGSIGPKGEVGDPGLQGAIGPSGKQGLEGKVGPTGPRGEVGAPGVQGPQGQPGVPGFPGQ 395

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------MGYPGRIGLDGR--------- 198
           EG +G  G+ G  GP+G  G++G +G  GD          G PG  G DG+         
Sbjct: 396 EGAKGNLGETGLTGPEGNKGEKGFKGSAGDRGLTGEPGTAGQPGATGRDGKTGPSGLHGK 455

Query: 199 ---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
               GLPG PG+ G+ G  G+ G+PG+ G  G  G PG  G  G +G TG  G +G SG 
Sbjct: 456 NGDTGLPGLPGMQGVAGSTGVVGMPGEMGDNGDLGAPGLQGPKGVQGATGATGEKGVSGP 515

Query: 256 NGVPG 260
            GVPG
Sbjct: 516 IGVPG 520



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 96/185 (51%), Gaps = 18/185 (9%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
             V  QG      E  PPGLQG  G+ G+IG+KG  G+ G+ G      + G PG +G PG
Sbjct: 842  FVGTQGAVGMRGEQGPPGLQGRNGRPGQIGSKGFPGLNGKDG------LNGKPGDKGFPG 895

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGL-- 207
             +G RG +G  G  G  G+PG +G +G  G MGYPG       +G  G  G PGEPG+  
Sbjct: 896  TDGMRGLQGIQGKDGTDGLPGKDGGKGEIGPMGYPGSQGVQGPMGEQGDIGEPGEPGILG 955

Query: 208  ----DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                 G  G+ G  G  GK G  G+ G+PG +G  GE G  G RG++G +G  G+ G P 
Sbjct: 956  QDGPKGSAGQQGNRGEDGKQGDKGESGVPGESGKQGEAGEAGERGSKGLTGNTGISGPPG 1015

Query: 264  ICAYK 268
                K
Sbjct: 1016 DEGEK 1020



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 84/148 (56%), Gaps = 6/148 (4%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GP+G  G  G +G MG +G+ GE G PG++G  GP+G  G +G RG  G  G  G  G+P
Sbjct: 925  GPMGYPGSQGVQGPMGEQGDIGEPGEPGILGQDGPKGSAGQQGNRGEDGKQGDKGESGVP 984

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP------GKDGLPGKD 229
            G+ GK+G  G+ G  G  GL G  G+ G PG +G  G +G  G+P      G  G  G D
Sbjct: 985  GESGKQGEAGEAGERGSKGLTGNTGISGPPGDEGEKGDDGEQGLPGPIGPQGPRGSIGPD 1044

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G NG+ G+ G  GP G+RG+ GI G
Sbjct: 1045 GPVGRNGSKGDVGHPGPAGSRGEPGIRG 1072



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 99/197 (50%), Gaps = 28/197 (14%)

Query: 89  NAYSRIP-LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
           N  + +P L  MQG   ST      G+ G +G  G++GA G  G KG +G  GA G  G 
Sbjct: 456 NGDTGLPGLPGMQGVAGSTGVV---GMPGEMGDNGDLGAPGLQGPKGVQGATGATGEKGV 512

Query: 148 PGPQGIP---GDEGKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGY 189
            GP G+P   GD G  GP+G  G  GP G P               G++GK GP G+ GY
Sbjct: 513 SGPIGVPGRRGDTGAEGPQGSTGIQGPPGQPGAAGTDGKDGNPGDKGEQGKPGPTGNRGY 572

Query: 190 P---GRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           P   G+IG  G  GL    GE G  G PG +G  G+ G  G  G  G+PG  G  G KG 
Sbjct: 573 PGIAGKIGATGTTGLQGPRGETGAPGAPGSSGDIGLVGPKGSSGNVGLPGMRGKQGSKGN 632

Query: 244 TGPRGNRGKSGINGVPG 260
           TG +G++GK G+ G  G
Sbjct: 633 TGSKGSQGKQGLKGAAG 649



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 95/185 (51%), Gaps = 18/185 (9%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGD 156
           QG      E  P G  G +G+ G  G  G  G+ G+ G  G PG     GPPG  G  G+
Sbjct: 771 QGLQGPNGEVGPVGQPGLVGRDGNAGQPGPRGIDGDPGNPGNPGASGDQGPPGHDGKDGE 830

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRI------GLDGRDGLPGEPGL 207
            GK G +GD G+ G QG  G  G++GP   +G  G PG+I      GL+G+DGL G+PG 
Sbjct: 831 RGKPGKEGDKGFVGTQGAVGMRGEQGPPGLQGRNGRPGQIGSKGFPGLNGKDGLNGKPGD 890

Query: 208 DGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG +GM G+       G DGLPGKDG  G  G  G  G  G +G  G+ G  G PG 
Sbjct: 891 KGFPGTDGMRGLQGIQGKDGTDGLPGKDGGKGEIGPMGYPGSQGVQGPMGEQGDIGEPGE 950

Query: 262 PAICA 266
           P I  
Sbjct: 951 PGILG 955



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 96/195 (49%), Gaps = 19/195 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
           PG  GP+G+ G  G  G +G  G +G  G  G+ GP GPQG+ G  G+ GP         
Sbjct: 732 PGESGPVGEDGAQGTAGALGESGSKGGTGEIGLPGPTGPQGLQGPNGEVGPVGQPGLVGR 791

Query: 163 KGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G+ G PGP+GI   PG+ G  G  GD G PG  G DG  G PG+ G  G  G  G  G+
Sbjct: 792 DGNAGQPGPRGIDGDPGNPGNPGASGDQGPPGHDGKDGERGKPGKEGDKGFVGTQGAVGM 851

Query: 220 PGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK----RESC 272
            G+ G P   G++G PG  G+ G  G+ G  G  GK G  G PGT  +   +    ++  
Sbjct: 852 RGEQGPPGLQGRNGRPGQIGSKGFPGLNGKDGLNGKPGDKGFPGTDGMRGLQGIQGKDGT 911

Query: 273 SLLPNSETSQLLIPP 287
             LP  +  +  I P
Sbjct: 912 DGLPGKDGGKGEIGP 926



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 93/179 (51%), Gaps = 12/179 (6%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQ 151
            + G   S  +  P GL+G  G +G  G+KG+ G +GERG KG  G  GP      PGP+
Sbjct: 217 GLDGARGSKGDDGPVGLKGSPGIRGAQGSKGQSGEQGERGAKGINGDAGPVGEDGSPGPK 276

Query: 152 GIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  GD+GK G    KG +G  GPQG+PG +G+ G +G  G  G IG  G+ G  G+ G  
Sbjct: 277 GFDGDQGKPGTPGAKGAIGDVGPQGLPGPQGQIGERGSQGIQGEIGTVGKRGDTGQQGPQ 336

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           G  G  G  G P   GL G  G  G  G  G+ G TGPRG  G  G+ G  G P +  +
Sbjct: 337 GSIGPKGEVGDP---GLQGAIGPSGKQGLEGKVGPTGPRGEVGAPGVQGPQGQPGVPGF 392



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 97/204 (47%), Gaps = 20/204 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYP 169
           GL GP G +G  G  GE+G  G+ G  G  G  G PGP+GI   PG+ G  G  GD G P
Sbjct: 763 GLPGPTGPQGLQGPNGEVGPVGQPGLVGRDGNAGQPGPRGIDGDPGNPGNPGASGDQGPP 822

Query: 170 GPQGIPGDEGKRGPKGDMGY------------PGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G  G+ GK G +GD G+             G  GL GR+G PG+ G  G PG NG D
Sbjct: 823 GHDGKDGERGKPGKEGDKGFVGTQGAVGMRGEQGPPGLQGRNGRPGQIGSKGFPGLNGKD 882

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G+ GK   PG  G PGT+G  G +G+ G  G  G  G +G  G      Y        P 
Sbjct: 883 GLNGK---PGDKGFPGTDGMRGLQGIQGKDGTDGLPGKDGGKGEIGPMGYPGSQGVQGPM 939

Query: 278 SETSQLLIP--PTIVGSEHIFSSS 299
            E   +  P  P I+G +    S+
Sbjct: 940 GEQGDIGEPGEPGILGQDGPKGSA 963



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 100/211 (47%), Gaps = 42/211 (19%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPG------ 143
           +V M G      +   PGLQGP G +G  GA GE      +GV G RG+ GA G      
Sbjct: 476 VVGMPGEMGDNGDLGAPGLQGPKGVQGATGATGEKGVSGPIGVPGRRGDTGAEGPQGSTG 535

Query: 144 VVGPPGPQGI---------PGDEGKR---GPKGDMGYPGPQ---GIPGDEGKRGPKGDMG 188
           + GPPG  G          PGD+G++   GP G+ GYPG     G  G  G +GP+G+ G
Sbjct: 536 IQGPPGQPGAAGTDGKDGNPGDKGEQGKPGPTGNRGYPGIAGKIGATGTTGLQGPRGETG 595

Query: 189 YPGR------IGL------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPG 233
            PG       IGL       G  GLPG  G  G  G  G  G  GK GL    GKDG  G
Sbjct: 596 APGAPGSSGDIGLVGPKGSSGNVGLPGMRGKQGSKGNTGSKGSQGKQGLKGAAGKDGAVG 655

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G +G  G  GP G RG+ G +G PG P +
Sbjct: 656 EMGPSGITGPPGPLGKRGEPGEDGAPGLPGL 686



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 90/165 (54%), Gaps = 12/165 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGP------PGPQGIPGDEGKRGP 162
           PG QG IG++G  G +GE+G  G+RG   ++G  G +GP      PG QG  G  GK+G 
Sbjct: 303 PGPQGQIGERGSQGIQGEIGTVGKRGDTGQQGPQGSIGPKGEVGDPGLQGAIGPSGKQGL 362

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGI 219
           +G +G  GP+G  G  G +GP+G  G PG  G +G  G  GE GL   +G  G  G  G 
Sbjct: 363 EGKVGPTGPRGEVGAPGVQGPQGQPGVPGFPGQEGAKGNLGETGLTGPEGNKGEKGFKGS 422

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  GL G+ G  G  G  G  G TGP G  GK+G  G+PG P +
Sbjct: 423 AGDRGLTGEPGTAGQPGATGRDGKTGPSGLHGKNGDTGLPGLPGM 467



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 111/227 (48%), Gaps = 10/227 (4%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +GF     +   PG +G IG   ++G +G  G +G+ GE+G+ G+ G  G  G  GD G+
Sbjct: 276 KGFDGDQGKPGTPGAKGAIG---DVGPQGLPGPQGQIGERGSQGIQGEIGTVGKRGDTGQ 332

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +GP+G +G  G  G PG +G  GP G  G  G++G  G  G  G PG+ G  G+ G+ G 
Sbjct: 333 QGPQGSIGPKGEVGDPGLQGAIGPSGKQGLEGKVGPTGPRGEVGAPGVQGPQGQPGVPGF 392

Query: 220 PGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           PG++G     G+ G+ G  G  GEKG  G  G+RG +G  G  G P       ++     
Sbjct: 393 PGQEGAKGNLGETGLTGPEGNKGEKGFKGSAGDRGLTGEPGTAGQPGATGRDGKTGPSGL 452

Query: 277 NSETSQLLIPPTIVGSEHIFSSSPIV---VREGDNVRLRCVATGHPK 320
           + +     + P + G + +  S+ +V      GDN  L       PK
Sbjct: 453 HGKNGDTGL-PGLPGMQGVAGSTGVVGMPGEMGDNGDLGAPGLQGPK 498



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 12/160 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            G+QGP+G++G+IG  GE G+          G++G +G  G  G  G  G+PG+ GK+G  
Sbjct: 934  GVQGPMGEQGDIGEPGEPGILGQDGPKGSAGQQGNRGEDGKQGDKGESGVPGESGKQGEA 993

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G+ G  G +G+ G+ G  GP GD    G  G DG  GLPG  G  G  G  G DG  G++
Sbjct: 994  GEAGERGSKGLTGNTGISGPPGDE---GEKGDDGEQGLPGPIGPQGPRGSIGPDGPVGRN 1050

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G PG  G+ GE G+ G  GN G+ G+ G  G P 
Sbjct: 1051 GSKGDVGHPGPAGSRGEPGIRGDVGNAGQPGLVGSEGPPG 1090



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 78/153 (50%), Gaps = 6/153 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G  G +G +GE G  G  GE GA G  G        G+ G +G  G++G PGP
Sbjct: 714 PGEPGPRGPTGPVGDRGEPGESGPVGEDGAQGTAG------ALGESGSKGGTGEIGLPGP 767

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G  G +G  G  G +G PG +G DG  G PG  G+DG PG  G  G  G  G PG DG 
Sbjct: 768 TGPQGLQGPNGEVGPVGQPGLVGRDGNAGQPGPRGIDGDPGNPGNPGASGDQGPPGHDGK 827

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G++G  G  G +G  G+ G  G P +
Sbjct: 828 DGERGKPGKEGDKGFVGTQGAVGMRGEQGPPGL 860



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 90/178 (50%), Gaps = 18/178 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G  G+ G +G+ G +G++G  G  G VG  G QG PG +G+ G  G +G  G  
Sbjct: 817 GDQGPPGHDGKDGERGKPGKEGDKGFVGTQGAVGMRGEQGPPGLQGRNGRPGQIGSKGFP 876

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI- 231
           G+ G +G  G  GD G+PG  G+ G  G+ G+ G DG+PG++G  G  G  G PG  G+ 
Sbjct: 877 GLNGKDGLNGKPGDKGFPGTDGMRGLQGIQGKDGTDGLPGKDGGKGEIGPMGYPGSQGVQ 936

Query: 232 --------------PGTNGTNGEKGMTGPRGNR---GKSGINGVPGTPAICAYKRESC 272
                         PG  G +G KG  G +GNR   GK G  G  G P     + E+ 
Sbjct: 937 GPMGEQGDIGEPGEPGILGQDGPKGSAGQQGNRGEDGKQGDKGESGVPGESGKQGEAG 994



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 79/152 (51%), Gaps = 3/152 (1%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYP 169
           G QG  G+KG  G KG+ G +GE G +G  G+VGP GP G  G    +G RG KGD G  
Sbjct: 172 GDQGRTGEKGYKGDKGDQGEQGEMGFQGQMGIVGPDGPTGPVGPRGLDGARGSKGDDGPV 231

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G +G PG  G +G KG  G  G  G  G +G  G  G DG PG  G DG  GK G PG  
Sbjct: 232 GLKGSPGIRGAQGSKGQSGEQGERGAKGINGDAGPVGEDGSPGPKGFDGDQGKPGTPGAK 291

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G  G  G  G  G RG  GI G  GT
Sbjct: 292 GAIGDVGPQGLPGPQGQIGERGSQGIQGEIGT 323



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 92/190 (48%), Gaps = 13/190 (6%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            GLQG  G+ G  G  G+ G KGE G  G PG  G  GP G  GD G+ G  G +G  GP 
Sbjct: 901  GLQGIQGKDGTDGLPGKDGGKGEIGPMGYPGSQGVQGPMGEQGDIGEPGEPGILGQDGPK 960

Query: 172  -----QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                 QG  G++GK+G KG+ G PG  G  G  G  GE G  G+ G  G+ G PG +G  
Sbjct: 961  GSAGQQGNRGEDGKQGDKGESGVPGESGKQGEAGEAGERGSKGLTGNTGISGPPGDEGEK 1020

Query: 227  GKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
            G D   G+PG  G  G +G  GP G  G++G  G  G P     + E           Q 
Sbjct: 1021 GDDGEQGLPGPIGPQGPRGSIGPDGPVGRNGSKGDVGHPGPAGSRGEPGIRGDVGNAGQ- 1079

Query: 284  LIPPTIVGSE 293
               P +VGSE
Sbjct: 1080 ---PGLVGSE 1086



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 81/153 (52%), Gaps = 18/153 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+QG  G  G +G  GEMG   + G+ GAPG+ GP G QG  G  G++G  G +G PG 
Sbjct: 465 PGMQGVAGSTGVVGMPGEMG---DNGDLGAPGLQGPKGVQGATGATGEKGVSGPIGVPGR 521

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GK 228
           +G   D G  GP+G  G           G PG+PG  G  G++G  G  G+ G P   G 
Sbjct: 522 RG---DTGAEGPQGSTGI---------QGPPGQPGAAGTDGKDGNPGDKGEQGKPGPTGN 569

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG  G  G  G TG +G RG++G  G PG+
Sbjct: 570 RGYPGIAGKIGATGTTGLQGPRGETGAPGAPGS 602



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 92/188 (48%), Gaps = 33/188 (17%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------GPPGPQGI 153
           QG   +  E  P G QG +G KG IG  G +G  G RGE G PGV       G PG +G 
Sbjct: 78  QGQTGNIGEAGPKGNQGLVGLKGVIGLPGLLGEYGPRGEPGDPGVDGLKGAWGEPGIKGN 137

Query: 154 PGD---------EGKRGP---------------KGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           PG          +G +GP               +GD G  G +G  GD+G +G +G+MG+
Sbjct: 138 PGKGGNIGHQGIQGNQGPFGFKGEEGSKGLQGDEGDQGRTGEKGYKGDKGDQGEQGEMGF 197

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G++G+ G DG  G  G  G+   +G  G  G DG  G  G PG  G  G KG +G +G 
Sbjct: 198 QGQMGIVGPDGPTGPVGPRGL---DGARGSKGDDGPVGLKGSPGIRGAQGSKGQSGEQGE 254

Query: 250 RGKSGING 257
           RG  GING
Sbjct: 255 RGAKGING 262



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 94/198 (47%), Gaps = 13/198 (6%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG- 158
           +GF  S  +    G  G  GQ G  G  G+ G  G  G+ G  G+ G PG QG+ G  G 
Sbjct: 417 KGFKGSAGDRGLTGEPGTAGQPGATGRDGKTGPSGLHGKNGDTGLPGLPGMQGVAGSTGV 476

Query: 159 -----KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                + G  GD+G PG QG  G +G  G  G+ G  G IG+ GR    G+ G +G  G 
Sbjct: 477 VGMPGEMGDNGDLGAPGLQGPKGVQGATGATGEKGVSGPIGVPGRR---GDTGAEGPQGS 533

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRE 270
            G+ G PG+ G  G DG  G  G  GE+G  GP GNRG  GI    G  GT  +   + E
Sbjct: 534 TGIQGPPGQPGAAGTDGKDGNPGDKGEQGKPGPTGNRGYPGIAGKIGATGTTGLQGPRGE 593

Query: 271 SCS-LLPNSETSQLLIPP 287
           + +   P S     L+ P
Sbjct: 594 TGAPGAPGSSGDIGLVGP 611



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 68/122 (55%), Gaps = 6/122 (4%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+IGA G  G++G RGE GAPG    PG  G  G  G +G  G++G PG +G  G +G  
Sbjct: 577 GKIGATGTTGLQGPRGETGAPGA---PGSSGDIGLVGPKGSSGNVGLPGMRGKQGSKGNT 633

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGI---PGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G KG  G  G  G  G+DG  GE G  GI   PG  G  G PG+DG PG  G+ G  G +
Sbjct: 634 GSKGSQGKQGLKGAAGKDGAVGEMGPSGITGPPGPLGKRGEPGEDGAPGLPGLDGAQGPH 693

Query: 239 GE 240
           GE
Sbjct: 694 GE 695



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 76/154 (49%), Gaps = 6/154 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G KGE G KG  G +G  GE G  G  G  G  G  G  G  G  GD G P   
Sbjct: 406 GLTGPEGNKGEKGFKGSAGDRGLTGEPGTAGQPGATGRDGKTGPSGLHGKNGDTGLP--- 462

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G+PG +G  G  G +G PG +G +G  G P   G  G+ G  G  G  G+ G  G+PG+ 
Sbjct: 463 GLPGMQGVAGSTGVVGMPGEMGDNGDLGAPGLQGPKGVQGATGATGEKGVSGPIGVPGRR 522

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G  G+ GP G  G +G +G  G P 
Sbjct: 523 GDTGAEGPQGSTGIQGPPGQPGAAGTDGKDGNPG 556



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 92/206 (44%), Gaps = 36/206 (17%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
             +QG    T     PG  G IG  G  G+ G +G+ G RG++G+ G  G  G QG  G 
Sbjct: 585 TGLQGPRGETGAPGAPGSSGDIGLVGPKGSSGNVGLPGMRGKQGSKGNTGSKGSQGKQGL 644

Query: 157 EGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDG------------- 200
           +G  G  G +G  GP GI   PG  GKRG  G+ G PG  GLDG  G             
Sbjct: 645 KGAAGKDGAVGEMGPSGITGPPGPLGKRGEPGEDGAPGLPGLDGAQGPHGEDGQPGQPGQ 704

Query: 201 --------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM--------- 243
                   LPGEPG  G  G  G  G PG+ G  G+DG  GT G  GE G          
Sbjct: 705 PGVQGLRGLPGEPGPRGPTGPVGDRGEPGESGPVGEDGAQGTAGALGESGSKGGTGEIGL 764

Query: 244 ---TGPRGNRGKSGINGVPGTPAICA 266
              TGP+G +G +G  G  G P +  
Sbjct: 765 PGPTGPQGLQGPNGEVGPVGQPGLVG 790



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G KGE G+KG  G +G++G  G          +G  GD+G +G +G+MG+ G  
Sbjct: 151 GNQGPFGFKGEEGSKGLQGDEGDQGRTGE---------KGYKGDKGDQGEQGEMGFQGQM 201

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           GI G +G  GP G  G  G  G  G DG  G  G  GI G  G  G  G+ G  G  GI 
Sbjct: 202 GIVGPDGPTGPVGPRGLDGARGSKGDDGPVGLKGSPGIRGAQGSKGQSGEQGERGAKGIN 261

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  GE G  GP+G  G  G  G PG 
Sbjct: 262 GDAGPVGEDGSPGPKGFDGDQGKPGTPGA 290



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 93/209 (44%), Gaps = 45/209 (21%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI--- 153
           + + G   S+     PG++G  G KG  G+KG  G +G +G  G  G VG  GP GI   
Sbjct: 606 IGLVGPKGSSGNVGLPGMRGKQGSKGNTGSKGSQGKQGLKGAAGKDGAVGEMGPSGITGP 665

Query: 154 PGDEGKRGPKGDMGYPG---------P------------------QGIPGDEGKRGPK-- 184
           PG  GKRG  G+ G PG         P                  +G+PG+ G RGP   
Sbjct: 666 PGPLGKRGEPGEDGAPGLPGLDGAQGPHGEDGQPGQPGQPGVQGLRGLPGEPGPRGPTGP 725

Query: 185 -GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE--- 240
            GD G PG  G  G DG     G  G  G +G  G  G+ GLPG  G  G  G NGE   
Sbjct: 726 VGDRGEPGESGPVGEDGA---QGTAGALGESGSKGGTGEIGLPGPTGPQGLQGPNGEVGP 782

Query: 241 ---KGMTGPRGNRGK---SGINGVPGTPA 263
               G+ G  GN G+    GI+G PG P 
Sbjct: 783 VGQPGLVGRDGNAGQPGPRGIDGDPGNPG 811



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 89/201 (44%), Gaps = 36/201 (17%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPG 143
           +   QG   +T      G QG  G  G+ GA GEMG             +GE GE GAPG
Sbjct: 623 MRGKQGSKGNTGSKGSQGKQGLKGAAGKDGAVGEMGPSGITGPPGPLGKRGEPGEDGAPG 682

Query: 144 VVGPPGPQG---------------------IPGDEGKRGPKG---DMGYPGPQGIPGDEG 179
           + G  G QG                     +PG+ G RGP G   D G PG  G  G++G
Sbjct: 683 LPGLDGAQGPHGEDGQPGQPGQPGVQGLRGLPGEPGPRGPTGPVGDRGEPGESGPVGEDG 742

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            +G  G +G  G  G  G  GLPG  G  G+ G NG  G  G+ GL G+DG  G  G  G
Sbjct: 743 AQGTAGALGESGSKGGTGEIGLPGPTGPQGLQGPNGEVGPVGQPGLVGRDGNAGQPGPRG 802

Query: 240 EKGMTGPRGNRGKSGINGVPG 260
             G  G  GN G SG  G PG
Sbjct: 803 IDGDPGNPGNPGASGDQGPPG 823



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 65/125 (52%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           RG  G PG  GP GP G  G+ G+ GP G+ G  G  G  G+ G +G  G++G PG  G 
Sbjct: 711 RGLPGEPGPRGPTGPVGDRGEPGESGPVGEDGAQGTAGALGESGSKGGTGEIGLPGPTGP 770

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  GE G  G PG  G DG  G+ G  G DG PG  G  G  G  GP G+ GK G 
Sbjct: 771 QGLQGPNGEVGPVGQPGLVGRDGNAGQPGPRGIDGDPGNPGNPGASGDQGPPGHDGKDGE 830

Query: 256 NGVPG 260
            G PG
Sbjct: 831 RGKPG 835



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 15/107 (14%)

Query: 113  GLQGPIGQKGEIGAKG------------EMGVKGERGEKGAPGVVGPPGPQGIPGDEG-- 158
            G QG  G+ GE G+KG            + G KG+ GE+G PG +GP GP+G  G +G  
Sbjct: 988  GKQGEAGEAGERGSKGLTGNTGISGPPGDEGEKGDDGEQGLPGPIGPQGPRGSIGPDGPV 1047

Query: 159  -KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             + G KGD+G+PGP G  G+ G RG  G+ G PG +G +G  G  GE
Sbjct: 1048 GRNGSKGDVGHPGPAGSRGEPGIRGDVGNAGQPGLVGSEGPPGPQGE 1094



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 68/136 (50%), Gaps = 21/136 (15%)

Query: 110  CPPGLQGPIGQKGEIGA---KGEMGV---------KGERGEKGAPGVVGPPGPQGIPGDE 157
             P G  G  G +GE G    KGE GV          GE GE+G+ G+ G  G  G PGDE
Sbjct: 958  GPKGSAGQQGNRGEDGKQGDKGESGVPGESGKQGEAGEAGERGSKGLTGNTGISGPPGDE 1017

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDGRDGLPGEPGLD 208
            G++G  G+ G PGP G  G  G  GP         KGD+G+PG  G  G  G+ G+ G  
Sbjct: 1018 GEKGDDGEQGLPGPIGPQGPRGSIGPDGPVGRNGSKGDVGHPGPAGSRGEPGIRGDVGNA 1077

Query: 209  GIPGRNGMDGIPGKDG 224
            G PG  G +G PG  G
Sbjct: 1078 GQPGLVGSEGPPGPQG 1093



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 86/176 (48%), Gaps = 45/176 (25%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPG---------------PQ----GI----------- 153
           IG KGE G  G +G +G PG++GPPG               P+    GI           
Sbjct: 9   IGDKGEPGKNGRKGTRGEPGLMGPPGAGSAVGGLGSNKRPDPEAARVGIVGEFYGSATTF 68

Query: 154 ---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
              PG EG +G  G++G  GP+G   ++G  G KG +G PG +G  G  G PG+PG+DG+
Sbjct: 69  DYQPGPEGPQGQTGNIGEAGPKG---NQGLVGLKGVIGLPGLLGEYGPRGEPGDPGVDGL 125

Query: 211 P---GRNGMDGIPGKDGLPGKDGIPGTN------GTNGEKGMTGPRGNRGKSGING 257
               G  G+ G PGK G  G  GI G        G  G KG+ G  G++G++G  G
Sbjct: 126 KGAWGEPGIKGNPGKGGNIGHQGIQGNQGPFGFKGEEGSKGLQGDEGDQGRTGEKG 181


>gi|432904036|ref|XP_004077252.1| PREDICTED: collagen alpha-1(IX) chain-like [Oryzias latipes]
          Length = 677

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 99/171 (57%), Gaps = 18/171 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKGDMGY 168
           PG++G  G KGE G  G+ G KGE G++G+PG VG   P GPQGI G  G  GPKG++G 
Sbjct: 178 PGMKGHKGVKGEAGEPGKQGHKGEEGDQGSPGEVGSQGPMGPQGIRGSTGMLGPKGELGA 237

Query: 169 ------PGPQGIP---GDEGKR------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                 PGPQG+    GD G+R      GPKG+ G  G  G+ G  G  GEPGL G+ GR
Sbjct: 238 RGPDGDPGPQGVAGAIGDHGQRGVMGELGPKGETGVQGPRGITGLPGPKGEPGLPGVDGR 297

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G+ G+PG  G  GK G+PG  G  G  G+ G  G +G SG+ G  G P +
Sbjct: 298 VGIPGLPGAKGSVGKPGVPGEIGPQGLPGLPGSPGPKGLSGLKGDAGQPGL 348



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/192 (40%), Positives = 99/192 (51%), Gaps = 36/192 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKGERG---------EKG 140
           L  M+G      E   PG QG  G++G      E+G++G MG +G RG         E G
Sbjct: 177 LPGMKGHKGVKGEAGEPGKQGHKGEEGDQGSPGEVGSQGPMGPQGIRGSTGMLGPKGELG 236

Query: 141 APGVVGPPGPQGIPG---DEGKRG------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G  G PGPQG+ G   D G+RG      PKG+ G  GP+GI    G  GPKG+ G P 
Sbjct: 237 ARGPDGDPGPQGVAGAIGDHGQRGVMGELGPKGETGVQGPRGI---TGLPGPKGEPGLP- 292

Query: 192 RIGLDGRDGLPGEPGLD------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G+DGR G+PG PG        G+PG  G  G+PG  G PG  G+ G  G  G+ G+ G
Sbjct: 293 --GVDGRVGIPGLPGAKGSVGKPGVPGEIGPQGLPGLPGSPGPKGLSGLKGDAGQPGLPG 350

Query: 246 PRGNRGKSGING 257
             G+ GK+G  G
Sbjct: 351 ELGSAGKTGERG 362



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 73/146 (50%), Gaps = 7/146 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP GQKGE G  G  G  G  G  G PG    PGP G+ G+ GK GP G MG  GP
Sbjct: 86  PGLDGPPGQKGEPGTPGPRGAAG-VGPDGTPGS---PGPAGLLGEVGKVGPPGAMGVRGP 141

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QG     G  GP+G  G  G   L      PG PG  G+PG  G  G+ G+ G PGK G 
Sbjct: 142 QG---PRGPAGPRGAAGMLGNADLCPNSCPPGTPGHPGLPGMKGHKGVKGEAGEPGKQGH 198

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G  G  G +G  G  GI G
Sbjct: 199 KGEEGDQGSPGEVGSQGPMGPQGIRG 224



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 85/171 (49%), Gaps = 12/171 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGK 159
           PG  G +G+ G++G  G MGV+G +G +G  G  G  G            P G PG  G 
Sbjct: 118 PGPAGLLGEVGKVGPPGAMGVRGPQGPRGPAGPRGAAGMLGNADLCPNSCPPGTPGHPGL 177

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G KG  G  G  G PG +G +G +GD G PG +G  G  G  G  G  G+ G  G  G 
Sbjct: 178 PGMKGHKGVKGEAGEPGKQGHKGEEGDQGSPGEVGSQGPMGPQGIRGSTGMLGPKGELGA 237

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G DG PG  G+ G  G +G++G+ G  G +G++G+ G  G   +   K E
Sbjct: 238 RGPDGDPGPQGVAGAIGDHGQRGVMGELGPKGETGVQGPRGITGLPGPKGE 288



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 78/174 (44%), Gaps = 36/174 (20%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           +  QG         P GL G  G  G+ G  GE+G  G+ GE+G  G  GP GP G PGD
Sbjct: 319 IGPQGLPGLPGSPGPKGLSGLKGDAGQPGLPGELGSAGKTGERGEQGEFGPVGPIGEPGD 378

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGP------------------KGDMGYPGRIGLDGR 198
            G++GP G  G P         G RGP                  KG+ G  G  GL G 
Sbjct: 379 IGEQGPVGPAGKP---------GARGPKGDPGLPGLPGPPGFPGTKGERGERGESGLKGG 429

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G+   +G PG  G  G PG+ G  G+ GIP      GE G  GP G+RG+
Sbjct: 430 QGAQGD---EGNPGEKGEVGDPGEPGAKGETGIP------GEPGKRGPEGSRGQ 474



 Score = 42.7 bits (99), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 62/130 (47%), Gaps = 22/130 (16%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMG 188
           + GERGE                G +G  GP GD G PG     GIPG++G  GP GD G
Sbjct: 43  IDGERGED---------------GKDGPTGPDGDAGKPGSSGIPGIPGNDGLTGPVGDPG 87

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
             G  G  G  G PG  G  G+ G +G  G PG  GL    GK G PG  G  G +G  G
Sbjct: 88  LDGPPGQKGEPGTPGPRGAAGV-GPDGTPGSPGPAGLLGEVGKVGPPGAMGVRGPQGPRG 146

Query: 246 PRGNRGKSGI 255
           P G RG +G+
Sbjct: 147 PAGPRGAAGM 156



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 58/124 (46%), Gaps = 9/124 (7%)

Query: 176 GDEGKRGPKGDMGYPGRIGL------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP--G 227
           G +G  GP GD G PG  G+      DG  G  G+PGLDG PG+ G  G PG  G    G
Sbjct: 51  GKDGPTGPDGDAGKPGSSGIPGIPGNDGLTGPVGDPGLDGPPGQKGEPGTPGPRGAAGVG 110

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPP 287
            DG PG+ G  G  G  G  G  G  G+ G P  P   A  R +  +L N++      PP
Sbjct: 111 PDGTPGSPGPAGLLGEVGKVGPPGAMGVRG-PQGPRGPAGPRGAAGMLGNADLCPNSCPP 169

Query: 288 TIVG 291
              G
Sbjct: 170 GTPG 173


>gi|402902464|ref|XP_003914122.1| PREDICTED: collagen alpha-2(IV) chain [Papio anubis]
          Length = 1712

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/149 (46%), Positives = 86/149 (57%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP GQ G  G  G+ G  G  G++G  G+ G PG +G+PGD   RG  GD+G PGP
Sbjct: 823 PGLPGPSGQPGLSGPPGQHGFPGAPGQEGPLGLPGIPGLEGLPGD---RGDPGDIGAPGP 879

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
              +G+ GD G  G  G+ G+PG  G  G DG+PG PGL G  G  GMDG  G  GL G+
Sbjct: 880 VGMKGVSGDRGDAGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGR 939

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG+ G  G  G+ G +G  G+ G  G
Sbjct: 940 AGFPGSKGEAGFFGIPGLKGLAGEPGFKG 968



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 93/169 (55%), Gaps = 15/169 (8%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     +   PG +G  G  G  G KG+ G+ G  G+   PG+ GPPG  G PG  G+ 
Sbjct: 794 GFKGLPGDRGTPGFRGSQGMPGMPGLKGQPGLPGPSGQ---PGLSGPPGQHGFPGAPGQE 850

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------LPGEPGLDGIPGRN 214
           GP G  G PG +G+PGD   RG  GD+G PG +G+ G  G      L GE G  G PG  
Sbjct: 851 GPLGLPGIPGLEGLPGD---RGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGHPGSPGFK 907

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
           G+DG+PG  GL G+ G PG +G  G    KG  G  G++G++G  G+PG
Sbjct: 908 GIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRAGFPGSKGEAGFFGIPG 956



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 79/151 (52%), Gaps = 12/151 (7%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-P-----KGDMGYPGPQGIPGDEGKRG 182
           + G +G+ G  G PG  G PG +G PG  G +G P     KG  G PGP G P   G  G
Sbjct: 780 QPGPRGDAGVPGQPGFKGLPGDRGTPGFRGSQGMPGMPGLKGQPGLPGPSGQP---GLSG 836

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           P G  G+PG  G +G  GLPG PGL+G+PG     G PG  G PG  G+ G +G  G+ G
Sbjct: 837 PPGQHGFPGAPGQEGPLGLPGIPGLEGLPGDR---GDPGDIGAPGPVGMKGVSGDRGDAG 893

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           + G RG+ G  G  G+ G P     K E  S
Sbjct: 894 LAGERGHPGSPGFKGIDGMPGTPGLKGERGS 924



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 86/158 (54%), Gaps = 14/158 (8%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK----RGPKGDMGYPGPQGIPG 176
            KGE G +G MG+KG  G KG  G+ G PG  GIPG  G+    +G KGD+G PG  G+PG
Sbjct: 990  KGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGAPGIPGLPG 1049

Query: 177  DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-------IPGKDGLPGKD 229
              G  GP G  G+PG IG  G  G PG  GL G  G  G  G       +PG+ GL G+ 
Sbjct: 1050 FPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGPTGDFGDIGDTINLPGRPGLKGEQ 1109

Query: 230  ---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
               GIPG  G  GEKG  G  G  G +G+ GV G P +
Sbjct: 1110 GTAGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGL 1147



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 106/224 (47%), Gaps = 37/224 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G  G  G  G  G  G  G+ G +G PGV G      +PG++G RG +G MG  GP
Sbjct: 1307 PGSKGDAGNPGAPGTPGTKGWAGDSGPQGRPGVFG------LPGEKGPRGEQGFMGNTGP 1360

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-------EPGLDGIPGRNGMDGIPGK-- 222
             G  GD G +GPKGD G+PG  G+ G  G+ G        PG  G  GR G  G PG+  
Sbjct: 1361 AGAVGDRGPKGPKGDPGFPGAPGIVGAPGIAGIPQKIAIPPGTVGPQGRRGPPGAPGEMG 1420

Query: 223  ----------DGLPGKDGIPGTNGTN------GEKGMTGPRGNRGKSGINGVPGTPAICA 266
                       G PGK G  G  G +      G++G  G +G  G+ G  G PG+P +  
Sbjct: 1421 PQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPVGHQGPIGQEGAPGRPGSPGLPG 1480

Query: 267  YKRESCS----LLPNSETSQLLIPPTIVGSEHIFSSSPIVVREG 306
                S S    L+ +S+T Q  + P  VG   ++S   ++  EG
Sbjct: 1481 MPGRSVSIGYLLVKHSQTDQEPMCP--VGMNKLWSGYSLLYFEG 1522



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 81/168 (48%), Gaps = 21/168 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+G  G  G  G KG  G KG  G+ G PG+ G  G QG PG +G+ G  G  G PG 
Sbjct: 1103 PGLKGEQGTAGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGS 1162

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
            QG PG  G  G KGD G+PG  GL G  GL G  GL G+PG  G  G PG D        
Sbjct: 1163 QGEPGRIGLPGGKGDDGWPGIPGLPGFPGLRGIRGLHGLPGTKGFPGSPGADIHGDPGFP 1222

Query: 224  -------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                          LPG  G+PG  G  G  G  GP G+ G  G  G+
Sbjct: 1223 GPPGDRGNPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGLQGFPGI 1270



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 97/218 (44%), Gaps = 55/218 (25%)

Query: 96   LVAMQGFCNSTKEYCPPGLQG------PIGQKGEIG----AKGEMGVKGERGEKGAPGVV 145
            +    GF  S  +   PG  G      P G  G+IG      G  G+KGE+G  G PG+ 
Sbjct: 1059 ITGFPGFIGSRGDKGAPGRAGLYGEIGPTGDFGDIGDTINLPGRPGLKGEQGTAGIPGLK 1118

Query: 146  GPPGPQGIPGDEGKRGPKGDMGYP------GPQGIPGDEGK------RGPKGDMGYPGRI 193
            G           G++G +GD+G+P      G QG PG +G+       GP G  G PGRI
Sbjct: 1119 G---------FFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQGEPGRI 1169

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN--------------- 238
            GL G  G  G PG+ G+PG  G+ GI G  GLPG  G PG+ G +               
Sbjct: 1170 GLPGGKGDDGWPGIPGLPGFPGLRGIRGLHGLPGTKGFPGSPGADIHGDPGFPGPPGDRG 1229

Query: 239  ---------GEKGMTGPRGNRGKSGINGVPGTPAICAY 267
                     G  G+ G +G +G  G  G PG+P +  +
Sbjct: 1230 NPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGLQGF 1267



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 82/164 (50%), Gaps = 30/164 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMG----VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           PGL G  G +G  G KG+ G     +G+   +G PG+ GP G  GI G+ G++G KGD G
Sbjct: 462 PGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGINGEPGRKGDKGDPG 521

Query: 168 ------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                 +PG +G+PG+ G  GPKG  G    I   G     G+PG+ G+PG  G DG PG
Sbjct: 522 QHGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGER---GQPGVPGVPGMKGDDGSPG 578

Query: 222 KDGL-----------------PGKDGIPGTNGTNGEKGMTGPRG 248
           +DGL                 PG  G PG  GT G  G  GP G
Sbjct: 579 RDGLDGFPGLPGPPGDGIKGPPGDAGYPGIPGTKGTPGEMGPPG 622



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 90/196 (45%), Gaps = 47/196 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGP---QGIPGDEGK 159
            PGL GP GQ G  GA G+ G         ++G  G++G PG +G PGP   +G+ GD G 
Sbjct: 832  PGLSGPPGQHGFPGAPGQEGPLGLPGIPGLEGLPGDRGDPGDIGAPGPVGMKGVSGDRGD 891

Query: 160  RGPKGDMGYPGPQGI---------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G  G+ G+PG  G          PG +G+RG  G  G+ G  GL GR G PG       
Sbjct: 892  AGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRAGFPGS------ 945

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNG-----------------TNGEKGMTGP---RGNR 250
             G  G  GIPG  GL G+ G  G+ G                   GEKG  GP   +G  
Sbjct: 946  KGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYL 1005

Query: 251  GKSGINGVPGTPAICA 266
            G  GI G+PG P +  
Sbjct: 1006 GAKGIQGMPGIPGLSG 1021



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 80/163 (49%), Gaps = 18/163 (11%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +G+ G  G+ G KG  G++G PG  G  G  G+PG +G+ G  G  G PG  G PG  
Sbjct: 782 GPRGDAGVPGQPGFKGLPGDRGTPGFRGSQGMPGMPGLKGQPGLPGPSGQPGLSGPPGQH 841

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGI---------------P 220
           G  G  G  G  G  G+ G +GLP   G+PG  G PG  GM G+               P
Sbjct: 842 GFPGAPGQEGPLGLPGIPGLEGLPGDRGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGHP 901

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G DG+PGT G  GE+G  G  G +G  G+ G  G P 
Sbjct: 902 GSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRAGFPG 944



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 90/202 (44%), Gaps = 54/202 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERG---------------------EKGAPGVVGPPGPQ 151
            G  GP+G KG  G +G+ G+ GERG                     E+G+PG+ G  G  
Sbjct: 875  GAPGPVGMKGVSGDRGDAGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMP 934

Query: 152  GIPGDEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGD---------------------- 186
            G+ G  G  G KG+ G+   PG +G+ G+ G +G +GD                      
Sbjct: 935  GLKGRAGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPIILPGMKDIKGEKG 994

Query: 187  ----MGYPGRIGLDGRDGLPGEPGLDGIPGRNG----MDGIPGKDGLPGKDGIPGTNGTN 238
                MG  G +G  G  G+PG PGL GIPG  G    + G+ G  G PG  G+PG  G  
Sbjct: 995  DEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGAPGIPGLPGFPGVA 1054

Query: 239  GEKGMTGPRGNRGKSGINGVPG 260
            G  G+TG  G  G  G  G PG
Sbjct: 1055 GPPGITGFPGFIGSRGDKGAPG 1076



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 62/119 (52%), Gaps = 16/119 (13%)

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG----YPGRIGLDGRDGLPGEPGLDGI--- 210
           G++G KG  G+PG  G PG  G +G KGD G      G   + G  GLPG  G  GI   
Sbjct: 451 GRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGINGE 510

Query: 211 PGRNGMDGIPGKDGLPG---KDGIPGTNGTNGEKGMTG------PRGNRGKSGINGVPG 260
           PGR G  G PG+ GLPG     G+PG  G  G KG  G       +G RG+ G+ GVPG
Sbjct: 511 PGRKGDKGDPGQHGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPGVPGVPG 569



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 87/187 (46%), Gaps = 36/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G +GE    G +G+ G +G+ G PG+       G+PG  G RG +G  G PG 
Sbjct: 1154 PGLTGPPGSQGE---PGRIGLPGGKGDDGWPGI------PGLPGFPGLRGIRGLHGLPGT 1204

Query: 172  QGIPGDEGK--------------RGPKGDMG-YPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G PG  G               RG  GD    PG +G+ G+ G  G PG  G PG  G+
Sbjct: 1205 KGFPGSPGADIHGDPGFPGPPGDRGNPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGL 1264

Query: 217  DGIPG------KDGLPGKDGIPGTNGTNGEKGMTGPR------GNRGKSGINGVPGTPAI 264
             G PG        G PG  G PG  G  G +G  GP       G++G +G  G PGTP  
Sbjct: 1265 QGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDAGNPGAPGTPGT 1324

Query: 265  CAYKRES 271
              +  +S
Sbjct: 1325 KGWAGDS 1331



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 76/173 (43%), Gaps = 39/173 (22%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD----EGKRGPKGDMGYPGPQGIPGDEG 179
            G KG  G  G  G  G+PG  GP G +G  GD    EG    +G  G PGP+G  G  G
Sbjct: 450 FGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGING 509

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG------------IPGKDGLPG 227
           + G KGD G PG+       GLPG PGL G+PG  G  G              G+ G PG
Sbjct: 510 EPGRKGDKGDPGQ------HGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPG 563

Query: 228 KDGIPGTNGTNGEKG-----------------MTGPRGNRGKSGINGVPGTPA 263
             G+PG  G +G  G                 + GP G+ G  GI G  GTP 
Sbjct: 564 VPGVPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDAGYPGIPGTKGTPG 616



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 72/153 (47%), Gaps = 31/153 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G  G  G  G  G KG+ G+ G PG    PG +G+P         G++G PGP
Sbjct: 496 PGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGF---PGLKGVP---------GNVGAPGP 543

Query: 172 QGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGL--------------DGIPGRN 214
           +G  GD      +G +G  G PG  G+ G DG PG  GL               G PG  
Sbjct: 544 KGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDA 603

Query: 215 GMDGIPGKDGLPGKDGIPGTN--GTNGEKGMTG 245
           G  GIPG  G PG+ G PG    G  G++G  G
Sbjct: 604 GYPGIPGTKGTPGEMGPPGLGLPGFKGQRGFPG 636



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 64/134 (47%), Gaps = 19/134 (14%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQG 152
            QGF  +T      G +GP G KG+ G  G  G+ G  G  G        PG VGP G +G
Sbjct: 1352 QGFMGNTGPAGAVGDRGPKGPKGDPGFPGAPGIVGAPGIAGIPQKIAIPPGTVGPQGRRG 1411

Query: 153  IPGDEGK------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
             PG  G+            RG  G  G  G  G+    G RG +G +G+ G IG +G  G
Sbjct: 1412 PPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPVGHQGPIGQEGAPG 1471

Query: 201  LPGEPGLDGIPGRN 214
             PG PGL G+PGR+
Sbjct: 1472 RPGSPGLPGMPGRS 1485



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 9/76 (11%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G +G+ G  G  G  GPPG QG PG +G++G KG+ G P         G  GPKGD+G
Sbjct: 56  EKGGRGQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAP---------GITGPKGDVG 106

Query: 189 YPGRIGLDGRDGLPGE 204
             G  G  G DG+PG 
Sbjct: 107 ARGVSGFPGADGIPGH 122



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 92/267 (34%), Gaps = 93/267 (34%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG-------------K 159
           G  GP G  G  G KG  G KG RG  G  G  GP GP+G  GD G              
Sbjct: 299 GFPGPRGSPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDLGPPGLPAYSPHPSLA 358

Query: 160 RGPKGDMGYPGPQGIPGDE--------------------------GKRGPKGDMGYPG-- 191
           +G +GD G+PG QG PG +                          G+ GPKG +G PG  
Sbjct: 359 KGARGDPGFPGAQGEPGSQGEPGDPGPRGPPGLSIGDADQRRGLPGEMGPKGFIGDPGIP 418

Query: 192 ------------------------------RIGLDGRDGLPGEPGLDGIPGRNG------ 215
                                           G  G  G PG PGL G PG  G      
Sbjct: 419 ALYPGPPGPDGKPGPPGPPGLPGPPGPDGFLFGRKGAKGTPGFPGLSGSPGARGPKGWKG 478

Query: 216 ----------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                           + G+PG  G  G +G PG  G  G+ G  G  G  G  G+ G  
Sbjct: 479 DAGDCRCAEGDEAVRGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNV 538

Query: 260 GTPAICAYKRESCSLLPNSETSQLLIP 286
           G P     K +S ++    E  Q  +P
Sbjct: 539 GAPGPKGAKGDSRTITTKGERGQPGVP 565



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 57/125 (45%), Gaps = 25/125 (20%)

Query: 158 GKRGPKGDMGYPGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLP 202
           G +G KGD+G PGP GIP D               +  +G KG  G PG  G+     L 
Sbjct: 237 GVKGEKGDVGQPGPNGIPSDTLHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGIS----LK 292

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE G+ G PG  G        GL G+ G PG  G+ G  G  GP G RG  G  G  G P
Sbjct: 293 GEEGIMGFPGPRG------SPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDLGPP 346

Query: 263 AICAY 267
            + AY
Sbjct: 347 GLPAY 351



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 21/121 (17%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           E+G +G PG VGP         +G  GP G  G+PG QG  GD+G+RG  G  G  G +G
Sbjct: 56  EKGGRGQPGPVGP---------QGYNGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVG 106

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG             DGIPG  G  G  G PG +G NG +G +GP+G  G  G
Sbjct: 107 ARGVSGFPG------------ADGIPGHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEG 154

Query: 255 I 255
            
Sbjct: 155 F 155


>gi|392346093|ref|XP_575056.3| PREDICTED: collagen alpha-1(XXIV) chain-like [Rattus norvegicus]
          Length = 1316

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 95/179 (53%), Gaps = 24/179 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G QG  G KGE G +G+ G+ G  G+ G+PG   V G PG QG+PG  G  GP G+   P
Sbjct: 574 GDQGGHGAKGEKGNQGKRGLPGRAGKTGSPGERGVQGKPGLQGLPGSSGDMGPAGE---P 630

Query: 170 GPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           GP+G+PGD               EG  G +G+ G  G +G  G +G  GEPG  G PG  
Sbjct: 631 GPRGLPGDAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDVGPTGSEGATGEPGPRGEPGAP 690

Query: 215 GMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G +G+ GKDGL   PG  G+PG +G  GE G+ G  G  G+ G  G PG+  I     E
Sbjct: 691 GEEGLQGKDGLKGAPGGSGLPGEDGEKGEMGLPGTAGPVGRPGQMGPPGSEGIVGTPGE 749



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 9/152 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGLQG  G  G++G  GE G +G  G+ G PG +G  GP G  GD G +G  G  G  GP
Sbjct: 612 PGLQGLPGSSGDMGPAGEPGPRGLPGDAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDVGP 671

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGL 225
            G  G  G+ GP+G+ G PG  GL G+DGL G PG  G+PG +      G+ G  G  G 
Sbjct: 672 TGSEGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGEKGEMGLPGTAGPVGR 731

Query: 226 PGKDGIPGTN---GTNGEKGMTGPRGNRGKSG 254
           PG+ G PG+    GT GE+G TG +G++G++G
Sbjct: 732 PGQMGPPGSEGIVGTPGERGRTGKKGDKGQTG 763



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 93/179 (51%), Gaps = 33/179 (18%)

Query: 116 GPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGI------------------P 154
           G IG+ G +G  GE+G+ G   E+GE+G+PG +GP G +G+                  P
Sbjct: 487 GKIGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPIGLP 546

Query: 155 GDEGKRG------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  G RG      PKG  G  GP G+ GD+G  G KG+ G  G+ GL GR G  G PG  
Sbjct: 547 GLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGRAGKTGSPGER 606

Query: 209 GIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G+ G+ G+ G+PG        G PG  G+PG  G  GE G+ GP G  G SG+ G PG 
Sbjct: 607 GVQGKPGLQGLPGSSGDMGPAGEPGPRGLPGDAGLPGEMGVEGPPGTEGDSGLQGEPGA 665



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 101/206 (49%), Gaps = 18/206 (8%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPG 149
           L   QG   +  E    G +G  G+ G+ G+ GE GV+G+ G +G PG        G PG
Sbjct: 572 LAGDQGGHGAKGEKGNQGKRGLPGRAGKTGSPGERGVQGKPGLQGLPGSSGDMGPAGEPG 631

Query: 150 PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG---LPGEPG 206
           P+G+PGD G  G  G  G PG +G  G +G+ G KGD+G  G  G  G  G    PG PG
Sbjct: 632 PRGLPGDAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDVGPTGSEGATGEPGPRGEPGAPG 691

Query: 207 LDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +G+ G++G+ G PG  GLPG+D      G+PGT G  G  G  GP G+    GI G PG
Sbjct: 692 EEGLQGKDGLKGAPGGSGLPGEDGEKGEMGLPGTAGPVGRPGQMGPPGSE---GIVGTPG 748

Query: 261 TPAICAYKRESCSLLPNSETSQLLIP 286
                  K +     P  E      P
Sbjct: 749 ERGRTGKKGDKGQTGPVGEAGSRGSP 774



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/153 (47%), Positives = 85/153 (55%), Gaps = 9/153 (5%)

Query: 112  PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGD 165
            PGL+G  GQ+G   E G +GE G+KGERG +G  G  G PGP G   IPG  G  GPKG 
Sbjct: 871  PGLRGAAGQQGPPGEPGDQGEQGLKGERGSEGPQGKKGVPGPSGKPGIPGLPGLPGPKGL 930

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GY G  G+ G  GK G  G  G PG  GL G+ G+PG+ G  G  G  G  G PG  G 
Sbjct: 931  QGYHGVDGLSGYPGKPGLLGKQGLPGEQGLPGQPGIPGQRGQRGTQGDQGRRGEPGLKGQ 990

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            PG+    G  G  G +G  GPRG  G +GI G+
Sbjct: 991  PGEH---GNQGLTGFQGFPGPRGPEGDAGIIGI 1020



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/140 (47%), Positives = 81/140 (57%), Gaps = 18/140 (12%)

Query: 127 KGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ---GIPGDEGK 180
           KG MGV G RG   ++G PG  G  G QG+ G+ G  GP+G  G PGP    GIPG  G 
Sbjct: 865 KGHMGVPGLRGAAGQQGPPGEPGDQGEQGLKGERGSEGPQGKKGVPGPSGKPGIPGLPGL 924

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            GPKG  GY    G+DG  G PG+PGL       G  G+PG+ GLPG+ GIP   G  G+
Sbjct: 925 PGPKGLQGY---HGVDGLSGYPGKPGL------LGKQGLPGEQGLPGQPGIP---GQRGQ 972

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           +G  G +G RG+ G+ G PG
Sbjct: 973 RGTQGDQGRRGEPGLKGQPG 992



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 100/201 (49%), Gaps = 33/201 (16%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGP- 147
            +QG   S+ +  P G  GP G  G+ G  GEMGV+G          +GE GA G VGP 
Sbjct: 613 GLQGLPGSSGDMGPAGEPGPRGLPGDAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDVGPT 672

Query: 148 --------PGPQ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                   PGP+   G PG+EG +G  G  G PG  G+PG++G+   KG+MG PG  G  
Sbjct: 673 GSEGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGE---KGEMGLPGTAGPV 729

Query: 197 GRDGLPGEPGLDGI---PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           GR G  G PG +GI   PG  G  G  G  G  G  G  G+ G+ G  G +GP+G RG  
Sbjct: 730 GRPGQMGPPGSEGIVGTPGERGRTGKKGDKGQTGPVGEAGSRGSPGRVGDSGPKGARGTR 789

Query: 254 ------GINGVPGTPAICAYK 268
                 G+ G  G P I  Y+
Sbjct: 790 GAVGPLGLMGPEGEPGIPGYR 810



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 98/213 (46%), Gaps = 58/213 (27%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRG-P--------- 162
           GP G +G  GA G +G+ G  GE G PG   + G PGP G+PG +G++G P         
Sbjct: 781 GPKGARGTRGAVGPLGLMGPEGEPGIPGYRGLEGQPGPSGLPGPKGEKGYPGEDSTVLGP 840

Query: 163 ------------------------KGDMGYPG---------PQGIPGDEGKRG------- 182
                                   KG MG PG         P G PGD+G++G       
Sbjct: 841 PGPRGEPGPMGERGERGEHGEEGYKGHMGVPGLRGAAGQQGPPGEPGDQGEQGLKGERGS 900

Query: 183 --PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGT 237
             P+G  G PG  G  G  GLPG PG  G+ G +G+DG+   PGK GL GK G+PG  G 
Sbjct: 901 EGPQGKKGVPGPSGKPGIPGLPGLPGPKGLQGYHGVDGLSGYPGKPGLLGKQGLPGEQGL 960

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+ G+ G RG RG  G  G  G P +     E
Sbjct: 961 PGQPGIPGQRGQRGTQGDQGRRGEPGLKGQPGE 993



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 92/184 (50%), Gaps = 36/184 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG------------------------EKGAPGVVGPP 148
           G+ G IG+KGE G+ G +G +GE+G                         +GAPG  GP 
Sbjct: 502 GITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPIGLPGLVGARGAPGSPGPK 561

Query: 149 G------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G      P G+ GD+G  G KG+ G  G +G+PG  GK G  G+ G  G+ GL    GLP
Sbjct: 562 GQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGRAGKTGSPGERGVQGKPGL---QGLP 618

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G  G  G  G  G  G+PG  GLPG+ G+   PGT G +G +G  G +G+ G +G  G  
Sbjct: 619 GSSGDMGPAGEPGPRGLPGDAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDVGPTGSEGAT 678

Query: 260 GTPA 263
           G P 
Sbjct: 679 GEPG 682



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 92/181 (50%), Gaps = 3/181 (1%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            +QG   +  +  P G +G  G+   +GE GA GE G++G+ G KGAPG  G PG  G  
Sbjct: 658 GLQGEPGAKGDVGPTGSEGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGEK 717

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ G  G  G +G PG  G PG EG  G  G+ G  G+ G  G+ G  GE G  G PGR 
Sbjct: 718 GEMGLPGTAGPVGRPGQMGPPGSEGIVGTPGERGRTGKKGDKGQTGPVGEAGSRGSPGRV 777

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G  G  G  G  G  G  G  GE G+ G RG  G+ G +G+PG      Y  E  ++
Sbjct: 778 GDSGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGLEGQPGPSGLPGPKGEKGYPGEDSTV 837

Query: 275 L 275
           L
Sbjct: 838 L 838



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 90/209 (43%), Gaps = 61/209 (29%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYP 169
           G  G  G  GE G KGEMG+ G  G  G PG +GPPG +GI   PG+ G+ G KGD G  
Sbjct: 703 GAPGGSGLPGEDGEKGEMGLPGTAGPVGRPGQMGPPGSEGIVGTPGERGRTGKKGDKGQT 762

Query: 170 GP------QGIPGDEGKRGPKGD------------MGYPGRIGLDGRDGLPGEPGLDGIP 211
           GP      +G PG  G  GPKG             MG  G  G+ G  GL G+PG  G+P
Sbjct: 763 GPVGEAGSRGSPGRVGDSGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGLEGQPGPSGLP 822

Query: 212 GRNGMDGIPGKD----------------------------------------GLPGKDGI 231
           G  G  G PG+D                                        G  G+ G 
Sbjct: 823 GPKGEKGYPGEDSTVLGPPGPRGEPGPMGERGERGEHGEEGYKGHMGVPGLRGAAGQQGP 882

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G  GE+G+ G RG+ G  G  GVPG
Sbjct: 883 PGEPGDQGEQGLKGERGSEGPQGKKGVPG 911



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 81/152 (53%), Gaps = 12/152 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PGL GP G KG+ G        GE+G+ G  G+VGPPG QG      ++G KG  G PG 
Sbjct: 165 PGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQG------EKGLKGHTGLPGL 218

Query: 171 --PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
              QGIPG  G     G  GYPGR GL G +G PG  G+ G  G  G  G  G +G  G 
Sbjct: 219 RGEQGIPGLAGN---VGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEAGQLGPEGERGT 275

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+ G  G  G +G  G  G+RG +G++G PG
Sbjct: 276 PGVRGKKGPKGRQGFPGDFGDRGPAGLDGSPG 307



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 72/134 (53%), Gaps = 6/134 (4%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           +G  G+ G  G  G PG+ GP GP+G PG    +   G KGD G  G  G PG +G++G 
Sbjct: 150 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGEKGL 209

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           KG  G P   GL G  G+PG  G  G PG  G  G+ G +G PG  G+ G  G+ GE G 
Sbjct: 210 KGHTGLP---GLRGEQGIPGLAGNVGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEAGQ 266

Query: 244 TGPRGNRGKSGING 257
            GP G RG  G+ G
Sbjct: 267 LGPEGERGTPGVRG 280



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 87/193 (45%), Gaps = 51/193 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPG---------PQGIPGDEGKR 160
           GL GP G +GE G KG  G+ G RGE+G PG+   VG PG         P+G PG +G R
Sbjct: 196 GLVGPPGLQGEKGLKGHTGLPGLRGEQGIPGLAGNVGSPGYPGRQGLAGPEGNPGSKGVR 255

Query: 161 G------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG-------- 206
           G        G +G  G +G PG  GK+GPKG  G+PG  G  G  GL G PG        
Sbjct: 256 GFIGSPGEAGQLGPEGERGTPGVRGKKGPKGRQGFPGDFGDRGPAGLDGSPGLVGGIGPP 315

Query: 207 -------------------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                                    L G  G  G+ G  G+ G+ G+ G PG  G  G  
Sbjct: 316 GFPGIRGNVGPAGPVGPPGVPGPMGLSGSRGPPGIKGDKGEQGVAGEPGEPGYPGDKGAI 375

Query: 242 GMTGPRGNRGKSG 254
           G  GP G RGKSG
Sbjct: 376 GSPGPPGIRGKSG 388



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 92/200 (46%), Gaps = 30/200 (15%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G++G IG  GE+G +G+ G K   G +G PGP+G+ G+ G +G  G +G  GP G
Sbjct: 440 LKGTQGEEGPIGPFGELGSRGKPGRK---GYMGEPGPEGLKGETGDQGDIGKIGETGPVG 496

Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
           +PG+    G  G KG+ G PG +G  G  G                  LPG  G  G PG
Sbjct: 497 LPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPIGLPGLVGARGAPG 556

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP------GTPAICA 266
             G  G  G  G  G  G  G +G  GEKG  G RG  G++G  G P      G P +  
Sbjct: 557 SPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGRAGKTGSPGERGVQGKPGLQG 616

Query: 267 YKRESCSLLPNSETSQLLIP 286
               S  + P  E     +P
Sbjct: 617 LPGSSGDMGPAGEPGPRGLP 636



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 67/133 (50%), Gaps = 21/133 (15%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------------PGRIGLDGRDGLPGEPG 206
           KRGP+G  G  G  G+PG  G +GPKGD G             PG +GL G  GL GE G
Sbjct: 149 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGEKG 208

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           L    G  G+ G+ G+ G+PG  G  G+ G  G +G+ GP GN G  G+ G  G+P    
Sbjct: 209 LK---GHTGLPGLRGEQGIPGLAGNVGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPG--- 262

Query: 267 YKRESCSLLPNSE 279
              E+  L P  E
Sbjct: 263 ---EAGQLGPEGE 272



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 88/184 (47%), Gaps = 42/184 (22%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------------ 152
           PPG++G    KGE G  GE G  G  G+KGA G  GPPG +G                  
Sbjct: 347 PPGIKG---DKGEQGVAGEPGEPGYPGDKGAIGSPGPPGIRGKSGPSGQPGDPGPQGPTG 403

Query: 153 ------------IPGDEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
                       IPG  G  GPKG +G    PGP G+ G +G+ GP G  G  G  G  G
Sbjct: 404 PPGPEGFPGDIGIPGQNGPEGPKGHLGSRGPPGPPGLKGTQGEEGPIGPFGELGSRGKPG 463

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           R G  GEPG +G+ G  G  G  GK       GLPG+ GI G+ G  GE+G  GP G +G
Sbjct: 464 RKGYMGEPGPEGLKGETGDQGDIGKIGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQG 523

Query: 252 KSGI 255
           + G+
Sbjct: 524 EKGV 527



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 79/188 (42%), Gaps = 34/188 (18%)

Query: 87  WLNAYSRIP-LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV 145
            L  ++ +P L   QG          PG  G  G  G  G  G  GV+G  G  G  G +
Sbjct: 208 GLKGHTGLPGLRGEQGIPGLAGNVGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEAGQL 267

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR------- 198
           GP G +G PG  GK+GPKG       QG PGD G RGP G  G PG +G  G        
Sbjct: 268 GPEGERGTPGVRGKKGPKGR------QGFPGDFGDRGPAGLDGSPGLVGGIGPPGFPGIR 321

Query: 199 --------------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                G  G PG+ G  G  G+ G PG+ G PG  G  G+ G  
Sbjct: 322 GNVGPAGPVGPPGVPGPMGLSGSRGPPGIKGDKGEQGVAGEPGEPGYPGDKGAIGSPGPP 381

Query: 239 GEKGMTGP 246
           G +G +GP
Sbjct: 382 GIRGKSGP 389



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 97/250 (38%), Gaps = 75/250 (30%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGI 153
           V   G+        P G  G  G +G IG+ GE G  G  GE+G PGV G  GP   QG 
Sbjct: 231 VGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEAGQLGPEGERGTPGVRGKKGPKGRQGF 290

Query: 154 PGDEGKRGPKGDMGYPG---------------------------------------PQGI 174
           PGD G RGP G  G PG                                       P GI
Sbjct: 291 PGDFGDRGPAGLDGSPGLVGGIGPPGFPGIRGNVGPAGPVGPPGVPGPMGLSGSRGPPGI 350

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG------------------------- 209
            GD+G++G  G+ G PG  G  G  G PG PG+ G                         
Sbjct: 351 KGDKGEQGVAGEPGEPGYPGDKGAIGSPGPPGIRGKSGPSGQPGDPGPQGPTGPPGPEGF 410

Query: 210 -----IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGT 261
                IPG+NG +G  G  G  G  G PG  GT GE+G  GP    G+RGK G  G  G 
Sbjct: 411 PGDIGIPGQNGPEGPKGHLGSRGPPGPPGLKGTQGEEGPIGPFGELGSRGKPGRKGYMGE 470

Query: 262 PAICAYKRES 271
           P     K E+
Sbjct: 471 PGPEGLKGET 480



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 6/94 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G  G  GE G  G+ G+ G+RG++G     G  G PG +G PG+ G +G  G  G+
Sbjct: 946  PGLLGKQGLPGEQGLPGQPGIPGQRGQRGTQGDQGRRGEPGLKGQPGEHGNQGLTGFQGF 1005

Query: 169  PGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRD 199
            PGP+G  GD    G  GPKG +G  G  G  GR+
Sbjct: 1006 PGPRGPEGDAGIIGIVGPKGPVGQRGNTGPLGRE 1039


>gi|297274817|ref|XP_001088660.2| PREDICTED: collagen alpha-1(IV) chain [Macaca mulatta]
          Length = 1607

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 93/167 (55%), Gaps = 26/167 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP   KG +G    MG+ G  GEKG PG+   PGPQG PG +G++G KG  G  GP
Sbjct: 1004 PGLPGP---KGSVGG---MGLPGTPGEKGVPGI---PGPQGSPGLQGEKGAKGAKGQAGP 1054

Query: 172  QGI--PGDEGKRGPKGDMGYPGRIGLDGRDG------LPGEPGLDGIPGRNGMDGIPG-- 221
             GI  PG  G++G +G  G+PG  G  G  G      +PG PGL G PG  G  G PG  
Sbjct: 1055 PGIGIPGLPGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLP 1114

Query: 222  ----KDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGT 261
                  GLPG DGIPG  G     G  G TGP G +G+ G +G+PG+
Sbjct: 1115 GEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGS 1161



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 86/163 (52%), Gaps = 17/163 (10%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA--PGVVGPPGPQGI- 153
            V   G   +  E   PG+ GP G  G  G KG  G KG+ G  G   PG+ G  G QGI 
Sbjct: 1013 VGGMGLPGTPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIA 1072

Query: 154  --PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
              PG  G++G KG +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIP
Sbjct: 1073 GFPGSPGEKGEKGSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIP 1129

Query: 212  GRNGMDGIP---------GKDGLPGKDGIPGTNGTNGEKGMTG 245
            G  G  G+P         G+ G PG DGIPG+ G  GE G+ G
Sbjct: 1130 GVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPG 1172



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 863  PGQQGSPGIPGFPGSKGEMGVMGTPGQPGSPGPVGVPG---LPGE------KGDHGFPGS 913

Query: 172  QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
             G  GD G +G KGD+G PG+                        IG  G  G  G+PG 
Sbjct: 914  SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 973

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 974  PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 1023



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 91/196 (46%), Gaps = 38/196 (19%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 960  GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 1019

Query: 167  ---------GYPGPQGIPGDEGKRGPKGDM-----------GYPGRIGLDGRDGLPGEP- 205
                     G PGPQG PG +G++G KG             G PG  G  G  G PG P 
Sbjct: 1020 GTPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIAGFPGSPG 1079

Query: 206  --------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                    G+ G+PG  G+ G PG  G PG  G+PG  G  G  G+ G  G +G++G+ G
Sbjct: 1080 EKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPG 1139

Query: 258  VPGTPAICAYKRESCS 273
             PG       K E  S
Sbjct: 1140 TPGPTGPAGQKGEPGS 1155



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 84/170 (49%), Gaps = 24/170 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGP 162
            PG  GP+G  G  G KG+ G  G  G +G PG+ G  G  G+PG  G          +G 
Sbjct: 890  PGSPGPVGVPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQ 949

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-- 220
            KGD G    +G  G  G++G +GD G PG  G DG+ G PG+PG  G PG +G  G P  
Sbjct: 950  KGDQGE---KGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGL 1006

Query: 221  ----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      G  G PG+ G+PG  G  G  G+ G +G +G  G  G PG
Sbjct: 1007 PGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGPPG 1056



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 89/179 (49%), Gaps = 31/179 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMGY 168
            PGL  P G KG+ G++G  GV G+ G  G PG  G PG  G PG +G+ G     G  G 
Sbjct: 834  PGLDMP-GPKGDKGSQGLPGVTGQSGLPGLPGQQGSPGIPGFPGSKGEMGVMGTPGQPGS 892

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD---------- 217
            PGP G+PG  G+   KGD G+PG  G  G  GL G+ G  G+PG+ G MD          
Sbjct: 893  PGPVGVPGLPGE---KGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQ 949

Query: 218  -------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                         G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 950  KGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 1008



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 111/259 (42%), Gaps = 48/259 (18%)

Query: 44   KGDIFDNSVPQTPHVEFVP--------PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIP 95
            KG +    +P TP  + VP        P L  E   +  + Q                 P
Sbjct: 1010 KGSVGGMGLPGTPGEKGVPGIPGPQGSPGLQGEKGAKGAKGQAGP--------------P 1055

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
             + + G      +    G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG
Sbjct: 1056 GIGIPGLPGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPG 1115

Query: 156  DEGKRGPKGDMGYPGPQG---IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG--- 209
            ++G +G  G  G PG +G   +PG  G  GP G  G PG  G+ G  G  GEPGL G   
Sbjct: 1116 EKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGF 1175

Query: 210  --IPGRNG---------------MDGIPGKDG---LPGKDGIPGTNGTNGEKGMTGPRGN 249
               PG  G               +DG+ G  G    PG  G+PG  G  G +GM G  G+
Sbjct: 1176 PGFPGAKGDKGLPGPMGPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGS 1235

Query: 250  RGKSGINGVPGTPAICAYK 268
             G +G  G  G P +  ++
Sbjct: 1236 PGITGSKGDMGPPGVPGFQ 1254



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 86/189 (45%), Gaps = 45/189 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP----------------------------- 142
            PG  GP GQKGE G+ G  G  GE+GE G P                             
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGLPGPMGPPGLPGID 1200

Query: 143  GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            GV G  G  G PG  G  GPKGD G+ G  GI G  G  G KGDMG PG  G  G  G+ 
Sbjct: 1201 GVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKGV- 1259

Query: 203  GEPGLDGIPGRNGMDGIPGK-------------DGLPGKDGIPGTNGTNGEKGMTGPRGN 249
              PGL GI G  G  G+PG              D + G+ G+PG  G  G KG+ GP G 
Sbjct: 1260 --PGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPAGLKGLQGPPGP 1317

Query: 250  RGKSGINGV 258
            +G+ G+ G+
Sbjct: 1318 KGQQGVTGL 1326



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 66/125 (52%), Gaps = 19/125 (15%)

Query: 111 PPGL--QGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQGIPGDEGKRGPK 163
           PPG+  Q  + +KG+   KGE G KGE G +G PGV      G PGP+G PG +G +G K
Sbjct: 239 PPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEK 298

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGEPGLDGIP 211
           G  G+PG  G PG  G++GP+G+ G              G +G  G  G PG PG  G P
Sbjct: 299 GSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEP 358

Query: 212 GRNGM 216
           G  G 
Sbjct: 359 GPKGF 363



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 65/130 (50%), Gaps = 27/130 (20%)

Query: 157 EGKRGPKGDMGYPGPQGIPGD-----------EGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           +G +G KGD G  GP G+PG            +G++G KG+ G+ G  G+ G  G PG+P
Sbjct: 225 QGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGV-GEKGEPGKP 283

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKG------------MTGPRGNR 250
           G  G PG++G  G  G  G PG+ G P   G  G  GEKG             TGP G +
Sbjct: 284 GPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEK 343

Query: 251 GKSGINGVPG 260
           G+ G  G PG
Sbjct: 344 GERGYPGTPG 353



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 54/105 (51%), Gaps = 17/105 (16%)

Query: 123 EIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI----- 174
           EIG  G+ G KG+RG     G  GV   PGPQG PG  G+ G KG+ G      I     
Sbjct: 487 EIGFPGQPGAKGDRGLPGRDGVAGV---PGPQGTPGLIGQPGAKGEPGE-----IYFDLR 538

Query: 175 -PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GD+G  G  G  G PGR G  GRDG PG PG  G PG  G+ G
Sbjct: 539 LKGDKGDPGFPGQPGMPGRAGSPGRDGRPGLPGPKGSPGSVGLKG 583



 Score = 42.7 bits (99), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 61/145 (42%), Gaps = 52/145 (35%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 644 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 703

Query: 184 KGDM------------GYPGR-----------IGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GDM            G PG            +GL G  GLPG PG+ G PG  G  G+P
Sbjct: 704 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVP 763

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTG 245
                    GIPG +G  G  G+ G
Sbjct: 764 ---------GIPGEHGAIGPPGLQG 779


>gi|432911039|ref|XP_004078565.1| PREDICTED: collagen alpha-1(XXVIII) chain-like [Oryzias latipes]
          Length = 1403

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 91/173 (52%), Gaps = 37/173 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
           G +GP G +G  G    +GVKG++G +G PGV GP G  G+    G +G KG+       
Sbjct: 643 GFEGPRGLRGIPG----VGVKGDKGIRGPPGVQGPIGLPGV----GLQGEKGNQGPPGPA 694

Query: 166 -------MGYPGPQG-----------IPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGE 204
                  +G  GP+G               +G+ GPKGD G PG +GL G+   DG+PG+
Sbjct: 695 GPRGSPGVGITGPKGDQGPPGEPGLPGERGKGEAGPKGDPGAPGLVGLPGQPGEDGIPGQ 754

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G+PG  G DG PGK G PG+ G  G  G+ G  G TGP+G  G+ G+ G
Sbjct: 755 KGDIGLPGPRGPDGAPGK-GTPGQKGDRGDRGSRGLPGATGPQGPMGQKGVPG 806



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 86/200 (43%), Gaps = 58/200 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMG-------------------------------------VK 133
           PPG+QGPIG  G +G +GE G                                      K
Sbjct: 667 PPGVQGPIGLPG-VGLQGEKGNQGPPGPAGPRGSPGVGITGPKGDQGPPGEPGLPGERGK 725

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP--------QGIPGDEGKRGPKG 185
           GE G KG PG  G  G  G PG++G  G KGD+G PGP        +G PG +G RG +G
Sbjct: 726 GEAGPKGDPGAPGLVGLPGQPGEDGIPGQKGDIGLPGPRGPDGAPGKGTPGQKGDRGDRG 785

Query: 186 DMGYPGRIGLDGRDGLPGEPG-----------LDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
             G PG  G  G  G  G PG             GIPG  G  G+PG  G  G+ GI G 
Sbjct: 786 SRGLPGATGPQGPMGQKGVPGNIGPPGLTGPPGRGIPGAKGDVGLPGPAGPMGESGI-GL 844

Query: 235 NGTNGEKGMTGPRGNRGKSG 254
            G  G++G+ GP G  G  G
Sbjct: 845 MGPKGDRGLPGPVGRPGLKG 864



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 97/240 (40%), Gaps = 83/240 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKR-------- 160
           PG +GP G  G+ G  G+ G +G+RG +G PG  GP GP   +G+PG+ G          
Sbjct: 761 PGPRGPDGAPGK-GTPGQKGDRGDRGSRGLPGATGPQGPMGQKGVPGNIGPPGLTGPPGR 819

Query: 161 ---GPKGDMGYPGPQGIPGDEG--KRGPKGDMGYPG---RIGLDGRD------------- 199
              G KGD+G PGP G  G+ G    GPKGD G PG   R GL G               
Sbjct: 820 GIPGAKGDVGLPGPAGPMGESGIGLMGPKGDRGLPGPVGRPGLKGEGFSGPPGLPGPPGL 879

Query: 200 ---------GLPGEPG----------------------------------------LDGI 210
                    GLPG+ G                                        + G 
Sbjct: 880 PGETGQDGIGLPGQKGDRGNPGPLGPAGPPGIGLIGPKGTMGQMGPAGPPGLPGEGIQGQ 939

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G  G  G+PG  G PG+ G+ G  G  G +G TG +G+RG+ G+ G  G P     K E
Sbjct: 940 KGDPGFQGLPGPRGFPGQ-GLQGDKGDRGLRGDTGKKGDRGEPGLLGPVGPPGRTGQKGE 998



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 7/72 (9%)

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
            +G+KG PG  G PGP+G PG +G +G KGD      +G+ GD GK+G +G+ G  G +G 
Sbjct: 937  QGQKGDPGFQGLPGPRGFPG-QGLQGDKGD------RGLRGDTGKKGDRGEPGLLGPVGP 989

Query: 196  DGRDGLPGEPGL 207
             GR G  GEPGL
Sbjct: 990  PGRTGQKGEPGL 1001



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 78/188 (41%), Gaps = 62/188 (32%)

Query: 112  PGLQGPIGQKGEIGAKGE--MGVKGERGEKGAPGVVGPPGPQG----------------- 152
            PG +G +G  G  G  GE  +G+ G +G++G PG VG PG +G                 
Sbjct: 822  PGAKGDVGLPGPAGPMGESGIGLMGPKGDRGLPGPVGRPGLKGEGFSGPPGLPGPPGLPG 881

Query: 153  --------IPGDEGKR-----------------GPKGDMGYPGP-----------QGIPG 176
                    +PG +G R                 GPKG MG  GP           QG  G
Sbjct: 882  ETGQDGIGLPGQKGDRGNPGPLGPAGPPGIGLIGPKGTMGQMGPAGPPGLPGEGIQGQKG 941

Query: 177  DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
            D G +G  G  G+PG+       GL G+ G  G+ G  G  G  G+ GL G  G PG  G
Sbjct: 942  DPGFQGLPGPRGFPGQ-------GLQGDKGDRGLRGDTGKKGDRGEPGLLGPVGPPGRTG 994

Query: 237  TNGEKGMT 244
              GE G+T
Sbjct: 995  QKGEPGLT 1002



 Score = 39.7 bits (91), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 60/126 (47%), Gaps = 17/126 (13%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           EG  GPKGD G+ GP+G+ G  G  G KGD G  G  G+ G  GLPG  GL G  G  G 
Sbjct: 633 EGYPGPKGDRGFEGPRGLRGIPGV-GVKGDKGIRGPPGVQGPIGLPGV-GLQGEKGNQGP 690

Query: 217 D-----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP---GTP 262
                       GI G  G  G  G PG  G  G KG  GP+G+ G  G+ G+P   G  
Sbjct: 691 PGPAGPRGSPGVGITGPKGDQGPPGEPGLPGERG-KGEAGPKGDPGAPGLVGLPGQPGED 749

Query: 263 AICAYK 268
            I   K
Sbjct: 750 GIPGQK 755


>gi|225874|prf||1402236A collagen alpha1(IV)
          Length = 1642

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 37/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            PG QG  G  G+ GAKGE        +G+ G RGEKG  G+ G       PG  G++G K
Sbjct: 1004 PGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAG------FPGSPGEKGEK 1057

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
            G +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIPG  G  G+PG  
Sbjct: 1058 GSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTP 1114

Query: 222  -------KDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRGKSGINGVPGTPA 263
                   + G PG DGIPG+ G  GE G+            G +G++G+ G  G+ G+P 
Sbjct: 1115 GPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPG 1174

Query: 264  ICAYKRE 270
            I   K E
Sbjct: 1175 IPGSKGE 1181



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 836 PGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPG---LPGE------KGDHGFPGS 886

Query: 172 QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
            G  GD G +G KGD+G PG+                        IG  G  G  G+PG 
Sbjct: 887 SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 946

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 947 PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 996



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 82/153 (53%), Gaps = 29/153 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD   PG  G PG  
Sbjct: 921  GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD---PGISGTPGAP 977

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GPKG +G     G+    GLPG PG  G+PG      IPG  G PG   +PG  G  
Sbjct: 978  GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGSPG---LPGDKGAK 1019

Query: 239  GEKGMTGP--------RGNRGKSGINGVPGTPA 263
            GEKG  GP        RG +G  GI G PG+P 
Sbjct: 1020 GEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPG 1052



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 91/172 (52%), Gaps = 28/172 (16%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 933  GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 992

Query: 167  ---------GYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                     G PGPQ   G+PGD+G +G KG  G PG IG+ G  G  G+ G+ G PG  
Sbjct: 993  GTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSP 1051

Query: 215  GMD------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G        GIPG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG
Sbjct: 1052 GEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 1103



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 94/186 (50%), Gaps = 37/186 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVG-P--PGPQ-- 151
            PG  G  GQ G+ G KG+ G+ G  G  G                PG  G P  PGPQ  
Sbjct: 950  PGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGS 1009

Query: 152  -GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGE 204
             G+PGD+G +G KG  G PG  GIPG  G++G +G  G+PG  G  G        G+PG 
Sbjct: 1010 PGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGS 1068

Query: 205  PGLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGI 255
            PGL G PG  G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G 
Sbjct: 1069 PGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGS 1128

Query: 256  NGVPGT 261
            +G+PG+
Sbjct: 1129 DGIPGS 1134



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 86/176 (48%), Gaps = 25/176 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL  P G KG+ GA+G  G+ G+ G  G PG  G PG  G PG +G+ G  G  G PG 
Sbjct: 807 PGLDMP-GPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGS 865

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD------------- 217
            G  G  G  G KGD G+PG  G  G  GL G+ G  G+PG+ G MD             
Sbjct: 866 PGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGD 925

Query: 218 ----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                     G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 926 QGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 981



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 75/143 (52%), Gaps = 16/143 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-------P--K 163
            G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG++G +G       P  K
Sbjct: 1046 GFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVK 1105

Query: 164  GDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+ G PG   P G     G++G  G  G PG  G  G  GLPG  G  G PG  G  G  
Sbjct: 1106 GEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPGR-GFPGFPGAKGDKGSK 1161

Query: 221  GKDGLPGKDGIPGTNGTNGEKGM 243
            G+ G PG  G PG  G+ GE+G 
Sbjct: 1162 GEVGFPGLAGSPGIPGSKGEQGF 1184



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 81/178 (45%), Gaps = 46/178 (25%)

Query: 111 PPGL--QGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQGIPGDEGKRGPK 163
           PPG+  Q  + +KG+   KGE G KGE G +G PGV      G PGP+G PG +G +G K
Sbjct: 212 PPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEK 271

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGEPGLDGIP 211
           G  G+PG  G PG  G++GP+G+ G              G +G  G  G PG PG  G P
Sbjct: 272 GSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEP 331

Query: 212 GRNGMD--------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           G  G                      G PG+ G  G  G PGT+       + GP G 
Sbjct: 332 GPKGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGTS-------LPGPSGR 382



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 61/123 (49%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----DE 178
           EIG  G+ G KG+RG  G  GV G PGPQG PG          +G PG +G PG    D 
Sbjct: 460 EIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGL---------IGQPGAKGEPGEFYFDL 510

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
             +G KGD G+PG+                G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 511 RLKGDKGDPGFPGQ---------------PGMPGRAGSPGRDGHPGLPGPKGSPGSVGLK 555

Query: 239 GEK 241
           GE+
Sbjct: 556 GER 558



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 72/149 (48%), Gaps = 33/149 (22%)

Query: 127 KGEMGV--KGERGEKGAPGVVGPPGPQGIPG--------DEGKRGPKGDMGYPGPQGIPG 176
           KG+MG+  +G +G+KG  GV GPPG   +PG        D   +G KG  G PG QG+PG
Sbjct: 190 KGQMGLSFQGPKGDKGDQGVSGPPG---VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPG 246

Query: 177 -----DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
                + GK GP+G  G  G  G  G  G PGEPG  G+ GR G  G  G+         
Sbjct: 247 VGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGI 306

Query: 224 -------GLPGKDGIPGTNGTNGEKGMTG 245
                  G  G+ G PGT G  GE G  G
Sbjct: 307 VIGTGPLGEKGERGYPGTPGPRGEPGPKG 335



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 85/203 (41%), Gaps = 66/203 (32%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP GQKGE G+    G     GE+GE G PG   P    G PG +G +G KG++G+
Sbjct: 1114 PGPTGPAGQKGEPGSDGIPGSA---GEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGF 1166

Query: 169  P---GPQGIPGDEGKR-----------------------GPKGDM--------------- 187
            P   G  GIPG +G++                       GPKGD                
Sbjct: 1167 PGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPM 1226

Query: 188  ---------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                           G PG  G  G  G  G+PG  G+PG  G  GI G  G  G  G+P
Sbjct: 1227 GPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVP 1286

Query: 233  GTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G  G+ G +G++G  G+
Sbjct: 1287 GFQGPKGLPGLQGIKGDQGDQGV 1309



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 58/136 (42%), Gaps = 43/136 (31%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 617 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 676

Query: 184 KGDM------------GYPGR-----------IGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GDM            G PG            +GL G  GLPG PG+ G PG  G  G+P
Sbjct: 677 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVP 736

Query: 221 GKDGLPGKDGIPGTNG 236
           G  G  G  G PG  G
Sbjct: 737 GVPGEHGAIGPPGLQG 752



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 79/185 (42%), Gaps = 43/185 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
           GL G  G  G  G KG +GV G  GE GA   +GPPG QGI G+ G              
Sbjct: 716 GLPGLPGIPGTPGEKGSIGVPGVPGEHGA---IGPPGLQGIRGEPGPPGLPGSVGSPGVP 772

Query: 160 -------------------------RGPKGDMGYPG--PQGIPGDEGKRGPKGDMGYPGR 192
                                    +G KG  G+PG    G  GD+G +G  G  G  G 
Sbjct: 773 GIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGL 832

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            GL G+ G PG PG  G  G  G+ G PG+ G PG  G PG  G  G+ G  G  G RG 
Sbjct: 833 PGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGD 892

Query: 253 SGING 257
            G+ G
Sbjct: 893 PGLKG 897



 Score = 39.7 bits (91), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--GIPGRN 214
           +G +G KGD G  GP G+PG + +   KGD    G  G  G  G  G PG+   G PG+ 
Sbjct: 198 QGPKGDKGDQGVSGPPGVPG-QAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKP 256

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G PGKDG  G+ G PG  G  G  G+ G +G +G+ G
Sbjct: 257 GPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKG 296


>gi|441614317|ref|XP_003270227.2| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(IV) chain [Nomascus
            leucogenys]
          Length = 1669

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 101/199 (50%), Gaps = 28/199 (14%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA--PGVVGPPGPQGI- 153
            V   G   +  E   PG+ GP G  G  G KG  G KG+ G  G   PG+ G  G QGI 
Sbjct: 1013 VGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLPGEKGDQGIV 1072

Query: 154  --PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
              PG  G++G KG +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLDGIP
Sbjct: 1073 GFPGSPGEKGEKGSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIP 1129

Query: 212  GRNGMDGIPG---------KDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRG 251
            G  G  G+PG         + G PG DGIPG+ G  GE G+            G +G++G
Sbjct: 1130 GVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKG 1189

Query: 252  KSGINGVPGTPAICAYKRE 270
            + G  G+ G+P I   K E
Sbjct: 1190 EVGFPGLAGSPGIPGSKGE 1208



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG   +PG+      KGD G+PG 
Sbjct: 863  PGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPG---LPGE------KGDHGFPGS 913

Query: 172  QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
             G  GD G +G KGD+G PG+                        IG  G  G  G+PG 
Sbjct: 914  SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 973

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 974  PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 1023



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 94/197 (47%), Gaps = 40/197 (20%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 960  GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 1019

Query: 167  ---------GYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRD---------GLPGEP 205
                     G PGPQ   G+PGD+G +G KG  G PG IG+ G           G PG P
Sbjct: 1020 GTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLPGEKGDQGIVGFPGSP 1078

Query: 206  ---------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                     G+ G+PG  G+ G PG  G PG  G+PG  G  G  G+ G  G +G++G+ 
Sbjct: 1079 GEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLP 1138

Query: 257  GVPGTPAICAYKRESCS 273
            G PG       K E  S
Sbjct: 1139 GTPGPTGPAGQKGEPGS 1155



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 93/177 (52%), Gaps = 28/177 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVG-P--PGPQ---GIPGDEGK 159
            PG  GP G  G  G  G  G+ G +G        G PG  G P  PGPQ   G+PGD+G 
Sbjct: 986  PGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGA 1045

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGR 213
            +G KG  G PG  GIPG  G++G +G +G+PG  G  G        G+PG PGL G PG 
Sbjct: 1046 KGEKGQAGPPG-IGIPGLPGEKGDQGIVGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGS 1104

Query: 214  NGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGT 261
             G  G P      G  GLPG DGIPG  G     G  G TGP G +G+ G +G+PG+
Sbjct: 1105 VGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGS 1161



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 81/153 (52%), Gaps = 29/153 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD   PG  G PG  
Sbjct: 948  GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD---PGISGTPGAP 1004

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GPKG +G     G+    GLPG PG  G+PG      IPG  G PG   +PG  G  
Sbjct: 1005 GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGSPG---LPGDKGAK 1046

Query: 239  GEKGMTGP--------RGNRGKSGINGVPGTPA 263
            GEKG  GP         G +G  GI G PG+P 
Sbjct: 1047 GEKGQAGPPGIGIPGLPGEKGDQGIVGFPGSPG 1079



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 86/176 (48%), Gaps = 25/176 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL  P G KG+ GA+G  G+ G+ G  G PG  G PG  G PG +G+ G  G  G PG 
Sbjct: 834  PGLDMP-GPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGS 892

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD------------- 217
             G  G  G  G KGD G+PG  G  G  GL G+ G  G+PG+ G MD             
Sbjct: 893  PGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGD 952

Query: 218  ----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                      G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 953  QGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 1008



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 81/159 (50%), Gaps = 24/159 (15%)

Query: 127 KGEMGV--KGERGEKGAPGVVGPPGPQGIPG--------DEGKRGPKGDMGYPGPQGIPG 176
           KG+MG+  +G +G+KG  GV GPPG   +PG        D   +G KG  G PG QG+PG
Sbjct: 217 KGQMGLSFQGPKGDKGDQGVSGPPG---VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPG 273

Query: 177 -----DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                + GK GP+G  G  G  G  G  G PGEPG  G+ GR G  G  G+ G PG  GI
Sbjct: 274 VGEKGEPGKLGPRGKPGKDGDKGEKGSPGFPGEPGYPGLVGRQGPQGEKGEAGPPGPPGI 333

Query: 232 ------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                 PG     GE G  GPRG  G  G  G+PG P  
Sbjct: 334 VKIGTGPGEKKERGEPGTPGPRGEPGPKGFPGLPGQPGA 372



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 86/186 (46%), Gaps = 50/186 (26%)

Query: 114 LQGPIGQKGEIGAKGEMGV--------------KGERGEKGAPGVVGPPG---------- 149
            QGP G KG+ G  G  GV              KGE+G+KG PG  G PG          
Sbjct: 224 FQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKL 283

Query: 150 -PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG--------RIGLDGRD- 199
            P+G PG +G +G KG  G+PG  G PG  G++GP+G+ G  G        +IG    + 
Sbjct: 284 GPRGKPGKDGDKGEKGSPGFPGEPGYPGLVGRQGPQGEKGEAGPPGPPGIVKIGTGPGEK 343

Query: 200 ---GLPGEPGLDGIPGRNGMDGIPGKDG-----LPGKDGIPGTNGTNGEKG--------M 243
              G PG PG  G PG  G  G+PG+ G     +PG  G PG  G  GEKG        +
Sbjct: 344 KERGEPGTPGPRGEPGPKGFPGLPGQPGAPGLPVPGLAGAPGFPGERGEKGDRGFPGVPL 403

Query: 244 TGPRGN 249
            GP G 
Sbjct: 404 PGPSGR 409



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 58/123 (47%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           EIG  G+ G KG+RG  G  GV G PGPQG PG  G+ G KG+                 
Sbjct: 487 EIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGE----------------- 529

Query: 183 PKGDMGYPGRIGLD----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                  PG I  D    G  G PG PG  G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 530 -------PGEIYFDLRLKGDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLK 582

Query: 239 GEK 241
           GE+
Sbjct: 583 GER 585



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 81/145 (55%), Gaps = 21/145 (14%)

Query: 112 PGLQG--PIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           PG QG   +G+KGE   +G +G+ G  G++GEKG+PG  G PG  G+ G +G +G KG+ 
Sbjct: 266 PGFQGMPGVGEKGEPGKLGPRGKPGKDGDKGEKGSPGFPGEPGYPGLVGRQGPQGEKGEA 325

Query: 167 GYPGPQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G PGP GI      PG++ +RG  G  G  G  G  G  GLPG+PG  G+P       +P
Sbjct: 326 GPPGPPGIVKIGTGPGEKKERGEPGTPGPRGEPGPKGFPGLPGQPGAPGLP-------VP 378

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTG 245
           G  G P   G PG  G  G++G  G
Sbjct: 379 GLAGAP---GFPGERGEKGDRGFPG 400



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 85/203 (41%), Gaps = 66/203 (32%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP GQKGE G+    G     GE+GE G PG   P    G PG +G +G KG++G+
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSA---GEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGF 1193

Query: 169  P---GPQGIPGDEGKR-----------------------GPKGDM--------------- 187
            P   G  GIPG +G++                       GPKGD                
Sbjct: 1194 PGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPM 1253

Query: 188  ---------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                           G PG  G  G  G  G+PG  G+PG  G  GI G  G  G  G+P
Sbjct: 1254 GPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVP 1313

Query: 233  GTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G  G+ G +G++G  G+
Sbjct: 1314 GFQGPKGLPGLQGIKGDQGDQGV 1336



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 71/144 (49%), Gaps = 30/144 (20%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 644 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 703

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGE 240
            GDMG PG  G  G +GLPG PG+ G  G  G+       GLPG     G+PG  GT GE
Sbjct: 704 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGV-------GLPGLKGLPGLPGIPGTPGE 756

Query: 241 KGMTGPRGNRGKSGINGVPGTPAI 264
           KG  G  G  G+ G+ G PG   I
Sbjct: 757 KGSIGVPGVPGEHGVIGPPGLQGI 780


>gi|393909722|gb|EFO24567.2| procollagen [Loa loa]
          Length = 1794

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 94/188 (50%), Gaps = 41/188 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEK--------------------GAPGVVGPPGPQ 151
           PGLQGP G++G  G+ G  G KGE G                      GAPG+ GP GP+
Sbjct: 808 PGLQGPKGERGYPGSPGLPGAKGEPGLSMTGPPGPPGFPGLKGNDGLPGAPGLPGPEGPR 867

Query: 152 GIPGDEGKRGP---------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           G+PG  G +G                KGD G+PG   +PG EG  GP G  G PG  G  
Sbjct: 868 GLPGVSGLKGEAGLPGAPGIAGLPGQKGDAGFPG---LPGAEGPVGPPGIAGAPGFPGQK 924

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G DGLPG PG+ G+    G  G+PG  GLPG  G PG  G  G+ G+ G  G +G +G+ 
Sbjct: 925 GEDGLPGLPGVAGL---KGEAGLPGAPGLPGAAGQPGFPGLKGQAGLPGIPGAKGDAGLP 981

Query: 257 GVPGTPAI 264
           G+PG P  
Sbjct: 982 GLPGAPGA 989



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/162 (46%), Positives = 85/162 (52%), Gaps = 12/162 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
            PG +GP+G  G  GA G  G KGE G  G PGV G  G  G+PG  G  G  G  G+P  
Sbjct: 903  PGAEGPVGPPGIAGAPGFPGQKGEDGLPGLPGVAGLKGEAGLPGAPGLPGAAGQPGFPGL 962

Query: 170  -GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             G  G+PG  G +G  G  G PG  G  G  GL G PGL G+ G +G  G PGKDGLP  
Sbjct: 963  KGQAGLPGIPGAKGDAGLPGLPGAPGAKGERGLAGLPGLPGMKGASGYPGAPGKDGLP-- 1020

Query: 229  DGIPGT------NGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             GIPG       NG  GEKG  GP    G  G  G+PG P +
Sbjct: 1021 -GIPGAKGERGFNGLPGEKGEPGPAARDGAKGDAGLPGAPGL 1061



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 87/153 (56%), Gaps = 6/153 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G +G  G  G   +KGE G  GAPG+ G PG +G  G  G  G +G +G PG 
Sbjct: 858  PGLPGPEGPRGLPGVSG---LKGEAGLPGAPGIAGLPGQKGDAGFPGLPGAEGPVGPPGI 914

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PG  G++G  G  G PG  GL G  GLPG PGL G  G+ G  G+ G+ GLP   GI
Sbjct: 915  AGAPGFPGQKGEDGLPGLPGVAGLKGEAGLPGAPGLPGAAGQPGFPGLKGQAGLP---GI 971

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PG  G  G  G+ G  G +G+ G+ G+PG P +
Sbjct: 972  PGAKGDAGLPGLPGAPGAKGERGLAGLPGLPGM 1004



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 100/215 (46%), Gaps = 48/215 (22%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVV------GPPGPQGIPGDEGKRGPKGDMGYPGP-- 171
           QKGE G  G  G +G  G  G P V       GPPG  G+P   G  GPKGD GYPG   
Sbjct: 709 QKGEAGIPGLPGAQGPVGPMGPP-VAESQLKPGPPGKDGLP---GLPGPKGDAGYPGAPG 764

Query: 172 -QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIPGKDG 224
            +G+PG  G  GPKG  G PG  G+DG+ GLP      G+PGL G+ G  G  G PG  G
Sbjct: 765 KEGVPGLPGLPGPKGSEGMPGPPGIDGQPGLPGPKGNAGKPGLPGLQGPKGERGYPGSPG 824

Query: 225 LPGKDGIPG-----------------TNGTNGEKGMTGPRGNRGKSGIN------GVPGT 261
           LPG  G PG                  +G  G  G+ GP G RG  G++      G+PG 
Sbjct: 825 LPGAKGEPGLSMTGPPGPPGFPGLKGNDGLPGAPGLPGPEGPRGLPGVSGLKGEAGLPGA 884

Query: 262 PAICAYKRESCSL----LPNSETSQLLIPPTIVGS 292
           P I     +        LP +E    + PP I G+
Sbjct: 885 PGIAGLPGQKGDAGFPGLPGAEGP--VGPPGIAGA 917



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/169 (45%), Positives = 89/169 (52%), Gaps = 27/169 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QG  GQKG  GA G  G+KG+ G  GAPG+ G  G  G+PG +G+ G  G  G PG  
Sbjct: 1104 GRQGAPGQKGLDGAPGFPGLKGDAGLPGAPGIPGQIGLPGLPGQKGEAGFPGQSGLPGAP 1163

Query: 173  GIPGD---EGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD---------------GIP 211
            G+PG     G RG KG  G PG  G  G DGLP   GEPGL                G P
Sbjct: 1164 GLPGKMGVPGIRGDKGVPGIPGAPGDRGLDGLPGQKGEPGLPGLQGPMGPPGPKGNIGAP 1223

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G+P   G PGKDG+PG  G  GE GM   +G  GK G  G+PG
Sbjct: 1224 GYPGIKGLP---GFPGKDGLPGLPGIKGEVGM---QGAPGKDGFPGIPG 1266



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 78/139 (56%), Gaps = 9/139 (6%)

Query: 132  VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG---PKGDMG 188
            + G +G  GA G+   PG  G+PG  G +G  G  GYPG  G+ G+ G  G    KG+ G
Sbjct: 1300 IAGPKGNAGASGL---PGKDGLPGLPGMKGEPGLSGYPGASGVKGEAGLPGIPGAKGEPG 1356

Query: 189  YPGRIGLDGRDGLPGEP---GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             PG  GL G+DGLPG P   GL GIPG  G  G+PG  G+PG+ G+ G  G  G  G  G
Sbjct: 1357 LPGLPGLRGKDGLPGAPGIAGLPGIPGAKGDAGLPGAPGVPGQPGLLGLKGEPGLPGFPG 1416

Query: 246  PRGNRGKSGINGVPGTPAI 264
            P+G  G  G  G+PG P +
Sbjct: 1417 PKGEAGIPGKPGLPGLPGL 1435



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/135 (46%), Positives = 78/135 (57%), Gaps = 8/135 (5%)

Query: 132  VKGERGEKG--APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            +KGE G+ G  APG+   PG +GIPG  GK+G     G PG +G+ G  G  G KGD G 
Sbjct: 1076 IKGEAGKPGYGAPGL---PGEKGIPGLPGKQG---RQGAPGQKGLDGAPGFPGLKGDAGL 1129

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PG  G+ G+ GLPG PG  G  G  G  G+PG  GLPGK G+PG  G  G  G+ G  G+
Sbjct: 1130 PGAPGIPGQIGLPGLPGQKGEAGFPGQSGLPGAPGLPGKMGVPGIRGDKGVPGIPGAPGD 1189

Query: 250  RGKSGINGVPGTPAI 264
            RG  G+ G  G P +
Sbjct: 1190 RGLDGLPGQKGEPGL 1204



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 93/199 (46%), Gaps = 42/199 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
            PG++G  G  G+ G  G  G+KGE G +GAPG  G PG   IPG +G+            
Sbjct: 1226 PGIKGLPGFPGKDGLPGLPGIKGEVGMQGAPGKDGFPG---IPGQKGEAGLPGLPGLPGK 1282

Query: 161  -------------------GPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                               GPKG+ G    PG  G+PG  G +G  G  GYPG  G+ G 
Sbjct: 1283 FFPLLIKNAIHGNHCASIAGPKGNAGASGLPGKDGLPGLPGMKGEPGLSGYPGASGVKGE 1342

Query: 199  DGLPG------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             GLPG      EPGL G+PG  G DG+PG  G+ G  GIPG  G  G  G  G  G  G 
Sbjct: 1343 AGLPGIPGAKGEPGLPGLPGLRGKDGLPGAPGIAGLPGIPGAKGDAGLPGAPGVPGQPGL 1402

Query: 253  SGINGVPGTPAICAYKRES 271
             G+ G PG P     K E+
Sbjct: 1403 LGLKGEPGLPGFPGPKGEA 1421



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 91/201 (45%), Gaps = 47/201 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G  G  GA G+ GV G  G  G  G  G PGP GI G  G  GPKG+ G PG 
Sbjct: 748 PGLPGPKGDAGYPGAPGKEGVPGLPGLPGPKGSEGMPGPPGIDGQPGLPGPKGNAGKPGL 807

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGL--------------------------DGRDGLPGEP 205
            G+      +GPKG+ GYPG  GL                          DG  G PG P
Sbjct: 808 PGL------QGPKGERGYPGSPGLPGAKGEPGLSMTGPPGPPGFPGLKGNDGLPGAPGLP 861

Query: 206 GLD---------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G +               G+PG  G+ G+PG+ G  G  G+PG  G  G  G+ G  G  
Sbjct: 862 GPEGPRGLPGVSGLKGEAGLPGAPGIAGLPGQKGDAGFPGLPGAEGPVGPPGIAGAPGFP 921

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G+ G +G+PG P +   K E+
Sbjct: 922 GQKGEDGLPGLPGVAGLKGEA 942



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/140 (48%), Positives = 75/140 (53%), Gaps = 3/140 (2%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGE G  G  G  G +GE G PG+ G  G  G+PG  G RG  G  G PG  
Sbjct: 1317 GLPGLPGMKGEPGLSGYPGASGVKGEAGLPGIPGAKGEPGLPGLPGLRGKDGLPGAPGIA 1376

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+PG  G +G  G  G PG  G  G  GL GEPGL G PG  G  GIPGK GLP   G+P
Sbjct: 1377 GLPGIPGAKGDAGLPGAPGVPGQPGLLGLKGEPGLPGFPGPKGEAGIPGKPGLP---GLP 1433

Query: 233  GTNGTNGEKGMTGPRGNRGK 252
            G  G  G  G+ G  G  GK
Sbjct: 1434 GLKGDCGVPGVPGRDGAPGK 1453



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 91/207 (43%), Gaps = 48/207 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL+G  G  G  G  G++G+ G   ++GE G PG  G PG  G+PG  G  G +GD G 
Sbjct: 1121 PGLKGDAGLPGAPGIPGQIGLPGLPGQKGEAGFPGQSGLPGAPGLPGKMGVPGIRGDKGV 1180

Query: 169  PGPQGIPGDEGKRGPKGDMGYPG------------------RIGLDGRDGLPGEPGLDGI 210
            PG  G PGD G  G  G  G PG                    G  G  GLPG PG DG+
Sbjct: 1181 PGIPGAPGDRGLDGLPGQKGEPGLPGLQGPMGPPGPKGNIGAPGYPGIKGLPGFPGKDGL 1240

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG---------------------------M 243
            PG  G+ G  G  G PGKDG PG  G  GE G                           +
Sbjct: 1241 PGLPGIKGEVGMQGAPGKDGFPGIPGQKGEAGLPGLPGLPGKFFPLLIKNAIHGNHCASI 1300

Query: 244  TGPRGNRGKSGINGVPGTPAICAYKRE 270
             GP+GN G SG+ G  G P +   K E
Sbjct: 1301 AGPKGNAGASGLPGKDGLPGLPGMKGE 1327



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 95/214 (44%), Gaps = 32/214 (14%)

Query: 86   VWLNAYSRIPLVAMQ-GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
              L     +P  A Q GF     +   PG+ G  G  G  G  G  G KGERG  G PG+
Sbjct: 942  AGLPGAPGLPGAAGQPGFPGLKGQAGLPGIPGAKGDAGLPGLPGAPGAKGERGLAGLPGL 1001

Query: 145  VG---------PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
             G          PG  G+PG  G +G +G  G PG +G PG   + G KGD G PG  GL
Sbjct: 1002 PGMKGASGYPGAPGKDGLPGIPGAKGERGFNGLPGEKGEPGPAARDGAKGDAGLPGAPGL 1061

Query: 196  ---------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                            G  G PG  G  G+PG  G+ G+PGK    G+ G PG  G +G 
Sbjct: 1062 RGPQGPPGLPGLPGIKGEAGKPGY-GAPGLPGEKGIPGLPGKQ---GRQGAPGQKGLDGA 1117

Query: 241  KGMTGPRGNRGKSGINGVPGT---PAICAYKRES 271
             G  G +G+ G  G  G+PG    P +   K E+
Sbjct: 1118 PGFPGLKGDAGLPGAPGIPGQIGLPGLPGQKGEA 1151



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 86/175 (49%), Gaps = 26/175 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G+ G  G  G  GVKGE G  G PG  G PG  G+PG  GK G  G  G  G 
Sbjct: 1319 PGLPGMKGEPGLSGYPGASGVKGEAGLPGIPGAKGEPGLPGLPGLRGKDGLPGAPGIAGL 1378

Query: 172  QGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKD-- 223
             GIPG   D G  G  G  G PG +GL G  GLPG PG     GIPG+ G+ G+PG    
Sbjct: 1379 PGIPGAKGDAGLPGAPGVPGQPGLLGLKGEPGLPGFPGPKGEAGIPGKPGLPGLPGLKGD 1438

Query: 224  ----GLPGKDGIPGTNGT--------------NGEKGMTGPRGNRGKSGINGVPG 260
                G+PG+DG PG  G                GEKG  GP G  G  G  G+PG
Sbjct: 1439 CGVPGVPGRDGAPGKIGEPGPMGPPGAEPLTLRGEKGDQGPMGVPGIRGEKGLPG 1493



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 83/167 (49%), Gaps = 40/167 (23%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGP--------------KGDMGYPGPQGIPGDEGKRGP 183
           E G PG+ G PG  G+PG  G +G               KG+ G      IPG  G +GP
Sbjct: 671 EPGFPGLTGKPGKDGLPGLPGLKGAPGYGLPGLPGLPGQKGEAG------IPGLPGAQGP 724

Query: 184 KGDMGYPG-----RIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKDGLP---GKDGIP 232
            G MG P      + G  G+DGLPG PG     G PG  G +G+PG  GLP   G +G+P
Sbjct: 725 VGPMGPPVAESQLKPGPPGKDGLPGLPGPKGDAGYPGAPGKEGVPGLPGLPGPKGSEGMP 784

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGV---------PGTPAICAYKRE 270
           G  G +G+ G+ GP+GN GK G+ G+         PG+P +   K E
Sbjct: 785 GPPGIDGQPGLPGPKGNAGKPGLPGLQGPKGERGYPGSPGLPGAKGE 831



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 96/223 (43%), Gaps = 75/223 (33%)

Query: 113  GLQGPIGQKGEIGAKGE------------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            GL G  GQKGE G  G+            MGV G RG+KG PG+ G PG +G+ G  G++
Sbjct: 1140 GLPGLPGQKGEAGFPGQSGLPGAPGLPGKMGVPGIRGDKGVPGIPGAPGDRGLDGLPGQK 1199

Query: 161  GPKG------------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG---RD 199
            G  G                    GYPG +G+PG  GK G  G  G  G +G+ G   +D
Sbjct: 1200 GEPGLPGLQGPMGPPGPKGNIGAPGYPGIKGLPGFPGKDGLPGLPGIKGEVGMQGAPGKD 1259

Query: 200  GLPGEPG---------------------------------LDGIPGRNGMDGIPGKDGLP 226
            G PG PG                                 + G  G  G  G+PGKDGLP
Sbjct: 1260 GFPGIPGQKGEAGLPGLPGLPGKFFPLLIKNAIHGNHCASIAGPKGNAGASGLPGKDGLP 1319

Query: 227  GKDGI---------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+         PG +G  GE G+ G  G +G+ G+ G+PG
Sbjct: 1320 GLPGMKGEPGLSGYPGASGVKGEAGLPGIPGAKGEPGLPGLPG 1362



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/116 (50%), Positives = 67/116 (57%), Gaps = 10/116 (8%)

Query: 112 PGLQGPI---GQKGE-IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           PGL GP+   G KG  IG +G  G+KGE+GE G PG  G PG  G PG  G  G KG+ G
Sbjct: 251 PGLPGPVPSTGAKGTIIGPQGSPGMKGEKGEPGEPGARGYPGNAGAPGQPGFPGMKGEKG 310

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
             GP G  G EG+ G  G  G+ G  GL   DGLPG PGL   PG+ G  G PG+D
Sbjct: 311 LSGPAGPRGKEGRPGLPGPPGFKGDRGL---DGLPGVPGL---PGQKGEPGFPGRD 360



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 67/137 (48%), Gaps = 29/137 (21%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GP+GI G++G +G +G  G PG   +PG     G KG +     IG  G  G+ GE    
Sbjct: 231 GPRGIQGEKGMKGDQGPRGLPG---LPGPVPSTGAKGTI-----IGPQGSPGMKGE---K 279

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS--------------- 253
           G PG  G  G PG  G PG+ G PG  G   EKG++GP G RGK                
Sbjct: 280 GEPGEPGARGYPGNAGAPGQPGFPGMKG---EKGLSGPAGPRGKEGRPGLPGPPGFKGDR 336

Query: 254 GINGVPGTPAICAYKRE 270
           G++G+PG P +   K E
Sbjct: 337 GLDGLPGVPGLPGQKGE 353



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 75/130 (57%), Gaps = 13/130 (10%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGP-P---------GPQGIPGDEGKRGPKGD---MGY 168
           G  G +GE G+KG++G +G PG+ GP P         GPQG PG +G++G  G+    GY
Sbjct: 231 GPRGIQGEKGMKGDQGPRGLPGLPGPVPSTGAKGTIIGPQGSPGMKGEKGEPGEPGARGY 290

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG  G PG  G  G KG+ G  G  G  G++G PG PG  G  G  G+DG+PG  GLPG+
Sbjct: 291 PGNAGAPGQPGFPGMKGEKGLSGPAGPRGKEGRPGLPGPPGFKGDRGLDGLPGVPGLPGQ 350

Query: 229 DGIPGTNGTN 238
            G PG  G +
Sbjct: 351 KGEPGFPGRD 360



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 95/244 (38%), Gaps = 95/244 (38%)

Query: 112 PGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--- 165
           PGL G  GQKGE G    +   G+KGE+G  G PG+ GP G +G+ G  G +GP GD   
Sbjct: 533 PGLPGLPGQKGERGGSCSICVPGMKGEKGSDGYPGLPGPQGERGLTGVPGDQGPPGDDGM 592

Query: 166 -------------------------------MGYPGPQGIPGDEGKRGPKG--------- 185
                                          +  PGP G PG +G+ G  G         
Sbjct: 593 PGAPGRPGPPGPPGKDGIPGLPGQKGEPTHMVLRPGPPGYPGQKGEAGFPGLPGQIGLPG 652

Query: 186 ------------------DMGYPGRIGLDGRDGLPGEPGLDGIP--------------GR 213
                             + G+PG  G  G+DGLPG PGL G P              G 
Sbjct: 653 KPGPPGLPGLPGIPGPKGEPGFPGLTGKPGKDGLPGLPGLKGAPGYGLPGLPGLPGQKGE 712

Query: 214 NGMDGIPG-----------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G+ G+PG                 K G PGKDG+PG  G  G+ G  G  G  G  G+ 
Sbjct: 713 AGIPGLPGAQGPVGPMGPPVAESQLKPGPPGKDGLPGLPGPKGDAGYPGAPGKEGVPGLP 772

Query: 257 GVPG 260
           G+PG
Sbjct: 773 GLPG 776



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 76/195 (38%), Gaps = 71/195 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGE G  G  G++G+ G  GAPG+ G PG   IPG +G  G  G  G PG  
Sbjct: 1344 GLPGIPGAKGEPGLPGLPGLRGKDGLPGAPGIAGLPG---IPGAKGDAGLPGAPGVPGQP 1400

Query: 173  GI------PGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGLD------------ 208
            G+      PG  G  GPKG+ G PG+ GL G  GL      PG PG D            
Sbjct: 1401 GLLGLKGEPGLPGFPGPKGEAGIPGKPGLPGLPGLKGDCGVPGVPGRDGAPGKIGEPGPM 1460

Query: 209  --------------------GIPGRNG------------------------MDGIPGKDG 224
                                G+PG  G                         DG PG  G
Sbjct: 1461 GPPGAEPLTLRGEKGDQGPMGVPGIRGEKGLPGLDGLPGPSGPPGPPGLKGADGFPGLPG 1520

Query: 225  LPGKDGIPGTNGTNG 239
            LPG+ G PG  G  G
Sbjct: 1521 LPGEKGAPGLPGFPG 1535


>gi|121583577|ref|NP_001073461.1| collagen alpha-2(XI) chain precursor [Danio rerio]
 gi|119391837|emb|CAL18602.1| collagen XI alpha 1 chain [Danio rerio]
          Length = 1695

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 86/154 (55%), Gaps = 15/154 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QG IG  G  G KG  G++G +G KG  G  G PG   I GD G +G +G++G PG
Sbjct: 627 PNGPQGSIGYPGPRGLKGAQGIRGLKGHKGEKGEDGFPG---IKGDFGVKGERGEVGVPG 683

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIG---LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           P+G   ++G  GPKG +G PG IG   L G  G  G PGL G PGR G+ G  G  G PG
Sbjct: 684 PRG---EDGPEGPKGRVGPPGEIGPLGLLGEKGKLGVPGLPGYPGRQGIKGSLGFPGFPG 740

Query: 228 KDGIPGTN------GTNGEKGMTGPRGNRGKSGI 255
            +G  GT       G  G++G TGPRG RG  G 
Sbjct: 741 TNGEKGTRGLIGKPGPRGQRGPTGPRGQRGPRGA 774



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 93/194 (47%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGD 165
           PG QG  G +G  G  GE G  G+ G  G PG  GPPG      P G  G++G  GP+G 
Sbjct: 574 PGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPGGTKGNQGPNGPQGS 633

Query: 166 MGYPGPQG------------------------IPGDEGKRGPKGDMGYPGRIGLDG---- 197
           +GYPGP+G                        I GD G +G +G++G PG  G DG    
Sbjct: 634 IGYPGPRGLKGAQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEGP 693

Query: 198 --RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMT----- 244
             R G PGE G  G+ G  G  G+PG  G PG+ GI      PG  GTNGEKG       
Sbjct: 694 KGRVGPPGEIGPLGLLGEKGKLGVPGLPGYPGRQGIKGSLGFPGFPGTNGEKGTRGLIGK 753

Query: 245 -GPRGNRGKSGING 257
            GPRG RG +G  G
Sbjct: 754 PGPRGQRGPTGPRG 767



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 78/158 (49%), Gaps = 15/158 (9%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A G  G+ G +G  G PG  GP G  G+PG  G  GP G  G  GP G  G++G  GP+G
Sbjct: 573 APGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPGGTKGNQGPNGPQG 632

Query: 186 DMGYPGRIGLDGRDGL------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            +GYPG  GL G  G+       GE G DG PG  G  G+ G+ G  G  G  G +G  G
Sbjct: 633 SIGYPGPRGLKGAQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEG 692

Query: 240 EKGMTGP---------RGNRGKSGINGVPGTPAICAYK 268
            KG  GP          G +GK G+ G+PG P     K
Sbjct: 693 PKGRVGPPGEIGPLGLLGEKGKLGVPGLPGYPGRQGIK 730



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 88/210 (41%), Gaps = 66/210 (31%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG---------------PQG 152
           PPG  G  G+ G  GA+G   E G+KG+RG  G PG+ G  G                 G
Sbjct: 450 PPGKAGRRGRAGADGARGMPGESGIKGDRGFDGLPGLPGDKGYRGQPGGMGPPGPHGEDG 509

Query: 153 IPGDEGKRGPKGDMGYPGPQGI-------------------------------------- 174
             GD+G  GP+G  G PGP+G+                                      
Sbjct: 510 ERGDDGDVGPRGLPGEPGPRGLLGPKGPSGLPGPPGVRGNDGPHGPKGNLGPQGEPGPPG 569

Query: 175 ----PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
               PG +G  GP+G  G PG  G  G+ GLPG PG DG PG       PGK+G  G  G
Sbjct: 570 QQGAPGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGH------PGKEGPGGTKG 623

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G NG  G  G  GPRG +G  GI G+ G
Sbjct: 624 NQGPNGPQGSIGYPGPRGLKGAQGIRGLKG 653



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 93/212 (43%), Gaps = 57/212 (26%)

Query: 111 PPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------- 160
           P G+ GP    G++G  GA G  G+ GE G KG  G  G PG   +PGD+G R       
Sbjct: 444 PQGVSGPPGKAGRRGRAGADGARGMPGESGIKGDRGFDGLPG---LPGDKGYRGQPGGMG 500

Query: 161 --------GPKGDMGYPGPQGIPGDEGKR------------------------GPKGDM- 187
                   G +GD G  GP+G+PG+ G R                        GPKG++ 
Sbjct: 501 PPGPHGEDGERGDDGDVGPRGLPGEPGPRGLLGPKGPSGLPGPPGVRGNDGPHGPKGNLG 560

Query: 188 -----------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                      G PG  G+ G  G  G PG  G  G+ G+ G+PG DG PG  G  G  G
Sbjct: 561 PQGEPGPPGQQGAPGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPGG 620

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           T G +G  GP+G+ G  G  G+ G   I   K
Sbjct: 621 TKGNQGPNGPQGSIGYPGPRGLKGAQGIRGLK 652



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 67/160 (41%), Gaps = 40/160 (25%)

Query: 149 GPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGK------------------------- 180
           GPQG PG   D G+RGP G  G PG  G+PG  G                          
Sbjct: 334 GPQGQPGSVGDPGERGPTGKAGLPGADGVPGPPGTSVMLPFRFGQSAGEKGPVASAQEAQ 393

Query: 181 ------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
                       +GP G MG+ GR G  G  G PG  G  G PG  G  G  G  G PGK
Sbjct: 394 AQAILSQARLALKGPSGPMGFTGRPGPLGTPGSPGFKGERGDPGAQGPRGPQGVSGPPGK 453

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G +G +GM G  G +G  G +G+PG P    Y+
Sbjct: 454 AGRRGRAGADGARGMPGESGIKGDRGFDGLPGLPGDKGYR 493



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 74/162 (45%), Gaps = 33/162 (20%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQG---------------IPGDEGKRGPKGDM------- 166
           E G +G+ G+ G  G+ G PGP+G               + G++G  GPKG++       
Sbjct: 507 EDGERGDDGDVGPRGLPGEPGPRGLLGPKGPSGLPGPPGVRGNDGPHGPKGNLGPQGEPG 566

Query: 167 -----------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
                      G PGPQG  G  G++GP G  G PG  G DG  G PG+ G  G  G  G
Sbjct: 567 PPGQQGAPGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPGGTKGNQG 626

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            +G  G  G PG  G+ G  G  G KG  G +G  G  GI G
Sbjct: 627 PNGPQGSIGYPGPRGLKGAQGIRGLKGHKGEKGEDGFPGIKG 668



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 66/135 (48%), Gaps = 21/135 (15%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           +G  G  G  G PGP G PG  G +G +GD   PG QG  G +G  GP G  G  GR G 
Sbjct: 406 KGPSGPMGFTGRPGPLGTPGSPGFKGERGD---PGAQGPRGPQGVSGPPGKAGRRGRAGA 462

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------------IPGTNGTNGEKGM 243
           DG  G+PGE    GI G  G DG+P   GLPG  G              G +G  G+ G 
Sbjct: 463 DGARGMPGE---SGIKGDRGFDGLP---GLPGDKGYRGQPGGMGPPGPHGEDGERGDDGD 516

Query: 244 TGPRGNRGKSGINGV 258
            GPRG  G+ G  G+
Sbjct: 517 VGPRGLPGEPGPRGL 531



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 69/146 (47%), Gaps = 21/146 (14%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------- 173
            +G  G +GE G KG+ G  G PG  GP GPQG PG  G  G +G  G  G QG       
Sbjct: 1246 RGPEGRQGEKGSKGDSGALGPPGKTGPVGPQGQPGKPGTEGLRGLPGTVGEQGSPGAAGP 1305

Query: 174  -----------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
                       + G  G  G KG+ G+PG +GL G  G  GE G  G+PG  G  G  G+
Sbjct: 1306 KGPPGPLGPPGLAGLRGDPGAKGEKGHPGMLGLIGPAGEQGEKGDRGMPGPQGSTGPKGE 1365

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+ G     G  G  G  GM GPRG
Sbjct: 1366 TGISGGT---GPLGPAGPAGMPGPRG 1388



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 71/178 (39%), Gaps = 45/178 (25%)

Query: 131  GVKGERGEKGAPGVVGPP---------------------GPQGIPGDEGKRGPKGDMGYP 169
            G KG+RGE G  G  G P                     GP+G  G++G +G  G +G P
Sbjct: 1208 GAKGDRGEDGEQGEAGSPGPTGENGPPGPPGKRGPAGTRGPEGRQGEKGSKGDSGALGPP 1267

Query: 170  ---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------------GLPGEP 205
               GP G  G  GK G +G  G PG +G  G                       G PG  
Sbjct: 1268 GKTGPVGPQGQPGKPGTEGLRGLPGTVGEQGSPGAAGPKGPPGPLGPPGLAGLRGDPGAK 1327

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G PG  G+ G  G+ G  G  G+PG  G+ G KG TG  G  G  G  G  G P 
Sbjct: 1328 GEKGHPGMLGLIGPAGEQGEKGDRGMPGPQGSTGPKGETGISGGTGPLGPAGPAGMPG 1385



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 56/130 (43%), Gaps = 36/130 (27%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKG------------------------------ERGEKG 140
            PPG  GP+G +G+ G  G  G++G                               RG+ G
Sbjct: 1266 PPGKTGPVGPQGQPGKPGTEGLRGLPGTVGEQGSPGAAGPKGPPGPLGPPGLAGLRGDPG 1325

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            A G  G PG  G+ G  G++G KGD G PGPQ      G  GPKG+ G  G  G  G  G
Sbjct: 1326 AKGEKGHPGMLGLIGPAGEQGEKGDRGMPGPQ------GSTGPKGETGISGGTGPLGPAG 1379

Query: 201  LPGEPGLDGI 210
              G PG  G+
Sbjct: 1380 PAGMPGPRGV 1389


>gi|344292438|ref|XP_003417934.1| PREDICTED: collagen alpha-4(IV) chain [Loxodonta africana]
          Length = 1683

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 91/158 (57%), Gaps = 6/158 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
           PGL+GP G++G  G  G  G  G   E+GAPG++G PG  G PG  G    +G +GD G 
Sbjct: 798 PGLKGPKGREGSAGFPGIPGPPGHSCERGAPGMLGQPGLPGAPGSPGAPGWKGQRGDQGP 857

Query: 169 PGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           PGP   +G+PG  G+ G  G  G PG  GL G DGLPG PG  G  G  G+ G PG+ G 
Sbjct: 858 PGPAGMKGLPGAPGQPGADGLPGPPGISGLFGDDGLPGLPGPHGPQGLPGVPGFPGERGK 917

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG +G PG  G +GEKG+ G  G+RG  G  G  G P 
Sbjct: 918 PGLEGRPGRKGEHGEKGLPGLLGDRGARGAKGERGPPG 955



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 84/166 (50%), Gaps = 27/166 (16%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------------ 166
           G  G+ G  G  GVKG RG+ G PG  G  G  GIPG +G +G +G              
Sbjct: 763 GPPGKRGLSGVPGVKGPRGDLGHPGPAGSAGTPGIPGLKGPKGREGSAGFPGIPGPPGHS 822

Query: 167 ------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                       G PG  G PG  G +G +GD G PG  G+ G  G PG+PG DG+PG  
Sbjct: 823 CERGAPGMLGQPGLPGAPGSPGAPGWKGQRGDQGPPGPAGMKGLPGAPGQPGADGLPGPP 882

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G+ G DGLP   G+PG +G  G  G+ G  G RGK G+ G PG
Sbjct: 883 GISGLFGDDGLP---GLPGPHGPQGLPGVPGFPGERGKPGLEGRPG 925



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 93/199 (46%), Gaps = 46/199 (23%)

Query: 111 PPGLQGPIGQKGEIGAKGEM-----------GVKGERGEKGAP--GVVGPPGPQGIPGDE 157
           PPG +G +G  G  G  G             GV G +G  G P  G  GPPG +G+ G  
Sbjct: 715 PPGFRGDMGDPGFRGETGSSPVGPPGFPSSPGVDGRKGIPGDPAYGYPGPPGKRGLSGVP 774

Query: 158 GKRGPKGDMGYPGP---QGIPGDEGKRGPKG------------------DMGYPGRIGLD 196
           G +GP+GD+G+PGP    G PG  G +GPKG                  + G PG +G  
Sbjct: 775 GVKGPRGDLGHPGPAGSAGTPGIPGLKGPKGREGSAGFPGIPGPPGHSCERGAPGMLGQP 834

Query: 197 GRDGLPGEPGL---------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---GEKGMT 244
           G  G PG PG           G PG  GM G+PG  G PG DG+PG  G +   G+ G+ 
Sbjct: 835 GLPGAPGSPGAPGWKGQRGDQGPPGPAGMKGLPGAPGQPGADGLPGPPGISGLFGDDGLP 894

Query: 245 GPRGNRGKSGINGVPGTPA 263
           G  G  G  G+ GVPG P 
Sbjct: 895 GLPGPHGPQGLPGVPGFPG 913



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 85/166 (51%), Gaps = 27/166 (16%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--MGYPGP---QGIPG 176
           G  G +G+MG  G RGE G+   VGPPG    PG +G++G  GD   GYPGP   +G+ G
Sbjct: 714 GPPGFRGDMGDPGFRGETGS-SPVGPPGFPSSPGVDGRKGIPGDPAYGYPGPPGKRGLSG 772

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------------------GMDG 218
             G +GP+GD+G+PG     G  G PG PGL G  GR                   G  G
Sbjct: 773 VPGVKGPRGDLGHPGPA---GSAGTPGIPGLKGPKGREGSAGFPGIPGPPGHSCERGAPG 829

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           + G+ GLPG  G PG  G  G++G  GP G  G  G+ G PG P  
Sbjct: 830 MLGQPGLPGAPGSPGAPGWKGQRGDQGPPGPAGMKGLPGAPGQPGA 875



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 79/162 (48%), Gaps = 31/162 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMGY 168
            PGL+G  G+KGE G KG  G+ G+RG +GA G  GP      PGDEG+      KG  G 
Sbjct: 918  PGLEGRPGRKGEHGEKGLPGLLGDRGARGAKGERGP------PGDEGEIAIISIKGKTGE 971

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL-DGIPGRN------------- 214
            PGP   PGD G  G KGD G PG  G  G  G  G PG   G PGRN             
Sbjct: 972  PGP---PGDAGVSGEKGDKGSPGMQGRKGEPGTHGSPGFHSGEPGRNGQQGLPGPPGPPG 1028

Query: 215  -----GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                 G+ G PG  G  G  G PG  G  G  G  GP+GN+G
Sbjct: 1029 LPGLRGIIGFPGFPGDQGDPGSPGPTGLTGSDGARGPKGNKG 1070



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 78/149 (52%), Gaps = 9/149 (6%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              M+G   +  +    GL GP G  G  G  G  G+ G  G +G PGV G PG +G PG 
Sbjct: 861  AGMKGLPGAPGQPGADGLPGPPGISGLFGDDGLPGLPGPHGPQGLPGVPGFPGERGKPGL 920

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGLDGI 210
            EG+ G KG+ G  G  G+ GD G RG KG+ G PG       I + G+ G PG PG  G+
Sbjct: 921  EGRPGRKGEHGEKGLPGLLGDRGARGAKGERGPPGDEGEIAIISIKGKTGEPGPPGDAGV 980

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
             G  G  G P   G+ G+ G PGT+G+ G
Sbjct: 981  SGEKGDKGSP---GMQGRKGEPGTHGSPG 1006



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 83/164 (50%), Gaps = 15/164 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGDEGK 159
            PG  G  GQ+G+ G  G  G+KG  G  G PG  G PGP GI            PG  G 
Sbjct: 843  PGAPGWKGQRGDQGPPGPAGMKGLPGAPGQPGADGLPGPPGISGLFGDDGLPGLPGPHGP 902

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G  G  G+PG +G PG EG+ G KG+    G PG +G  G  G  GE G  G  G   +
Sbjct: 903  QGLPGVPGFPGERGKPGLEGRPGRKGEHGEKGLPGLLGDRGARGAKGERGPPGDEGEIAI 962

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              I GK G PG  G  G +G  G+KG  G +G +G+ G +G PG
Sbjct: 963  ISIKGKTGEPGPPGDAGVSGEKGDKGSPGMQGRKGEPGTHGSPG 1006



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 93/218 (42%), Gaps = 71/218 (32%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPI------GQKGEIGAKGEMGVKGERGEKGAPGVVGPPG 149
            L+  +G   +  E  PPG +G I      G+ GE G  G+ GV GE+G+KG+PG+     
Sbjct: 938  LLGDRGARGAKGERGPPGDEGEIAIISIKGKTGEPGPPGDAGVSGEKGDKGSPGM----- 992

Query: 150  PQGIPGDEGKRGP----------------------------------------KGDMGYP 169
             QG  G+ G  G                                         +GD G P
Sbjct: 993  -QGRKGEPGTHGSPGFHSGEPGRNGQQGLPGPPGPPGLPGLRGIIGFPGFPGDQGDPGSP 1051

Query: 170  GPQGIPGDEGKRGPKGD-------------------MGYPGRIGLDGRDGLPGEPGLDGI 210
            GP G+ G +G RGPKG+                   +GYPG  G+ G  GLPG+ G  G 
Sbjct: 1052 GPTGLTGSDGARGPKGNKGDPPSQAGPPGPKGDPGSLGYPGHFGVPGERGLPGDQGPRGP 1111

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PGR G+ G  G  G PG  G+PG  G  GE G  GPRG
Sbjct: 1112 PGRPGLPGSSGPPGCPGDRGVPGLRGHPGETGDPGPRG 1149



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 67/136 (49%), Gaps = 23/136 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           GA G     G++G++G PG+   PGP G          +GDMG PG +G  G      P 
Sbjct: 690 GAPGPRCFDGQKGQRGKPGISEIPGPPGF---------RGDMGDPGFRGETGSS----PV 736

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G+P   G+DGR G+PG+P   G PG  G  G+          G+PG  G  G+ G  
Sbjct: 737 GPPGFPSSPGVDGRKGIPGDPAY-GYPGPPGKRGL---------SGVPGVKGPRGDLGHP 786

Query: 245 GPRGNRGKSGINGVPG 260
           GP G+ G  GI G+ G
Sbjct: 787 GPAGSAGTPGIPGLKG 802



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 69/139 (49%), Gaps = 24/139 (17%)

Query: 124 IGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGD----EGKRGPKGDMGYPGPQGIPG 176
           +G KG+ G  GE G++G+PG   +V PP       D    +G++G KG  G  GP G+ G
Sbjct: 231 VGVKGQKGDPGEVGQQGSPGPTLLVEPP-------DFCLYKGEKGIKGMPGVIGPPGLSG 283

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
            +GK G          IG  G  G+ G PG  G PG  G  G PG  G PG  G PG  G
Sbjct: 284 LKGKPG----------IGAKGEKGIVGFPGPRGEPGSYGSPGFPGLKGEPGLIGDPGLFG 333

Query: 237 TNGEKGMTGPRGNRGKSGI 255
             G KG  G RG+ G  G+
Sbjct: 334 FLGSKGDPGDRGHPGPPGV 352



 Score = 42.7 bits (99), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPGL G  G+ G IGAKGE G+ G  G +G PG  G PG  G+ G+ G  G  G  G+ G
Sbjct: 278 PPGLSGLKGKPG-IGAKGEKGIVGFPGPRGEPGSYGSPGFPGLKGEPGLIGDPGLFGFLG 336

Query: 171 PQGIPGDEGKRGPKG 185
            +G PGD G  GP G
Sbjct: 337 SKGDPGDRGHPGPPG 351



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 37/67 (55%), Gaps = 13/67 (19%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G+PG  G RGP+G MG PG +G PG E K          G  GLDGR G   EPG+ G P
Sbjct: 1373 GLPGVPGPRGPEGAMGIPGTRGPPGPECK----------GEPGLDGRRG---EPGIPGTP 1419

Query: 212  GRNGMDG 218
            G +G  G
Sbjct: 1420 GPSGRKG 1426



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 71/170 (41%), Gaps = 55/170 (32%)

Query: 105 STKEYCP---------PGL--------------------QGPIGQKGEIGAKGEMG---- 131
           S     P         PGL                    +G  G  GE+G +G  G    
Sbjct: 195 SRGASGPAGPVGFPGEPGLTGPPGHPGSPGLKGNPGVGVKGQKGDPGEVGQQGSPGPTLL 254

Query: 132 --------VKGERGEKGAPGVVGPPGPQGIPGDE--GKRGPKGDMGYPGPQGIPGDEGKR 181
                    KGE+G KG PGV+GPPG  G+ G    G +G KG +G+PGP+G P      
Sbjct: 255 VEPPDFCLYKGEKGIKGMPGVIGPPGLSGLKGKPGIGAKGEKGIVGFPGPRGEP------ 308

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
              G  G PG  GL G  GL G+PGL G     G  G PG  G PG  G+
Sbjct: 309 ---GSYGSPGFPGLKGEPGLIGDPGLFGF---LGSKGDPGDRGHPGPPGV 352


>gi|170031171|ref|XP_001843460.1| collagen alpha chain [Culex quinquefasciatus]
 gi|167869236|gb|EDS32619.1| collagen alpha chain [Culex quinquefasciatus]
          Length = 1839

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 98/204 (48%), Gaps = 42/204 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGD 165
            PG +G  GQ G  G +GE+G++G  G +G  G+ GP G      PQG PG+   RGP G+
Sbjct: 908  PGFKGDTGQPGAPGPQGEIGLQGPEGPRGFIGLPGPQGNNGKDGPQGTPGE---RGPPGE 964

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP-------------------- 205
             G PGP G PG  G +G  G+ G  G  G+ G  G+PGEP                    
Sbjct: 965  NGNPGPTGAPGVIGPQGQTGEPGPVGEPGIPGLPGMPGEPGVPGDTGKEGQVGPPGPPGK 1024

Query: 206  -------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------TGPRGNRGK 252
                   GL G PG  GM G+PG  GL G+ G+PG +G  G+KG        GP G  G+
Sbjct: 1025 NGPPGAQGLSGFPGERGMMGMPGLPGLKGEIGVPGNSGPVGDKGQPGEPGKEGPPGPEGR 1084

Query: 253  SGINGVPGTPAICAYKRESCSLLP 276
             G  G PG+  +   + +   + P
Sbjct: 1085 RGQTGPPGSVGLKGERGDMGLMGP 1108



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 85/165 (51%), Gaps = 6/165 (3%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            +   QGF  +      PG  G +G KG+ G  GE G +GE G  G PG VG PG  G PG
Sbjct: 1315 VAGAQGFPGN------PGEPGVVGPKGDTGKDGEDGKQGEPGLSGEPGPVGLPGEMGSPG 1368

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
              G  GP G  G PG  G  GD G  GP G++G  G  G+ G  GL G  G  G  G  G
Sbjct: 1369 KMGPEGPAGSQGTPGLPGEKGDRGLPGPAGNIGITGPQGMPGPQGLTGLRGSPGASGEIG 1428

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G+ G  GK G  G  G  G++G  GP+G+RG+ G+ G+ G
Sbjct: 1429 PTGKSGETGPAGKIGETGAKGQKGDRGKRGPKGHRGELGMVGLKG 1473



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 79/159 (49%), Gaps = 3/159 (1%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            G KG  G +G  G  G PGVVGP G  G  G++GK+G  G  G PGP G+PG+ G     
Sbjct: 1311 GPKGVAGAQGFPGNPGEPGVVGPKGDTGKDGEDGKQGEPGLSGEPGPVGLPGEMGS---P 1367

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G MG  G  G  G  GLPGE G  G+PG  G  GI G  G+PG  G+ G  G+ G  G  
Sbjct: 1368 GKMGPEGPAGSQGTPGLPGEKGDRGLPGPAGNIGITGPQGMPGPQGLTGLRGSPGASGEI 1427

Query: 245  GPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
            GP G  G++G  G  G       K +     P     +L
Sbjct: 1428 GPTGKSGETGPAGKIGETGAKGQKGDRGKRGPKGHRGEL 1466



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/145 (46%), Positives = 78/145 (53%), Gaps = 9/145 (6%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QGP G +G IG  G  G KG+ GE+GAPG  G  G +G  G++G  GP G+ G  G
Sbjct: 751 PKGDQGPQGVQGSIGFPGNRGPKGDDGERGAPGDRGEKGERGHDGEKGDMGPSGERGAIG 810

Query: 171 PQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           PQGI G EG  GPKG     G PG +GL G  G  G  G  G PG        G  G  G
Sbjct: 811 PQGITGIEGPEGPKGFEGPRGEPGAMGLSGEKGKQGVQGFTGYPGPT------GDKGDKG 864

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGK 252
             GI G  G  GE+G TG +G RG+
Sbjct: 865 SVGISGLTGDKGERGNTGLQGERGE 889



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 83/163 (50%), Gaps = 18/163 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G++G IG +G  G++G  G KG  G  G PG  G+ G++GK+G +G  GYPGP 
Sbjct: 798 GDMGPSGERGAIGPQGITGIEGPEGPKGFEGPRGEPGAMGLSGEKGKQGVQGFTGYPGPT 857

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------LDGIPGRNGMD 217
              GD+G +G  G  G  G  G  G  GL GE G                DG PG  G  
Sbjct: 858 ---GDKGDKGSVGISGLTGDKGERGNTGLQGERGEVGPRGFRGPRGRRGADGTPGFKGDT 914

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G  G+ G+ G  G  G  G+ GP+GN GK G  G PG
Sbjct: 915 GQPGAPGPQGEIGLQGPEGPRGFIGLPGPQGNNGKDGPQGTPG 957



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 94/205 (45%), Gaps = 42/205 (20%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE---MGVKGERGE---------------- 138
             +QGF          G +G +G  G  G KGE    G++GERGE                
Sbjct: 846  GVQGFTGYPGPTGDKGDKGSVGISGLTGDKGERGNTGLQGERGEVGPRGFRGPRGRRGAD 905

Query: 139  -----KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
                 KG  G  G PGPQG  G +G  GP+G +G PGPQG  G +G +G  G+ G PG  
Sbjct: 906  GTPGFKGDTGQPGAPGPQGEIGLQGPEGPRGFIGLPGPQGNNGKDGPQGTPGERGPPGEN 965

Query: 194  GLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------------ 238
            G  G  G P   G  G  G PG  G  GIPG  G+PG+ G+PG  G              
Sbjct: 966  GNPGPTGAPGVIGPQGQTGEPGPVGEPGIPGLPGMPGEPGVPGDTGKEGQVGPPGPPGKN 1025

Query: 239  ---GEKGMTGPRGNRGKSGINGVPG 260
               G +G++G  G RG  G+ G+PG
Sbjct: 1026 GPPGAQGLSGFPGERGMMGMPGLPG 1050



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 80/161 (49%), Gaps = 21/161 (13%)

Query: 108  EYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---- 160
            E  PPG  G   P G  G IG +G+ G  G  GE G PG+ G PG  G+PGD GK     
Sbjct: 958  ERGPPGENGNPGPTGAPGVIGPQGQTGEPGPVGEPGIPGLPGMPGEPGVPGDTGKEGQVG 1017

Query: 161  -----------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
                       G +G  G+PG +G+ G  G  G KG++G PG  G  G  G PGEPG +G
Sbjct: 1018 PPGPPGKNGPPGAQGLSGFPGERGMMGMPGLPGLKGEIGVPGNSGPVGDKGQPGEPGKEG 1077

Query: 210  IP---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
             P   GR G  G PG  GL G+ G  G  G  G  G+ G R
Sbjct: 1078 PPGPEGRRGQTGPPGSVGLKGERGDMGLMGPIGRDGLPGQR 1118



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/151 (40%), Positives = 73/151 (48%), Gaps = 24/151 (15%)

Query: 126  AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            A+G  G  GERG  G PG+ G  G  G+PG+ G  G KG  G PG +G PG EG+R   G
Sbjct: 1030 AQGLSGFPGERGMMGMPGLPGLKGEIGVPGNSGPVGDKGQPGEPGKEGPPGPEGRR---G 1086

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---------------DGLPGKDG 230
              G PG +GL       GE G  G+ G  G DG+PG+               DG  G  G
Sbjct: 1087 QTGPPGSVGLK------GERGDMGLMGPIGRDGLPGQRGLTGPPGPQGPPGEDGDKGDMG 1140

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG  G  G +G  GP G+ G  G  G PG 
Sbjct: 1141 PPGEKGFKGAQGEAGPTGSPGSQGSRGEPGA 1171



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 72/144 (50%), Gaps = 12/144 (8%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G  G +G PG+VGP G      D+G +G +G +G+PG +G  GD+G+RG  GD G  
Sbjct: 735 GADGAPGREGNPGIVGPKG------DQGPQGVQGSIGFPGNRGPKGDDGERGAPGDRGEK 788

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G DG  G  G  G  G  G  G+ GI G +G  G +      G  GE G  G  G +
Sbjct: 789 GERGHDGEKGDMGPSGERGAIGPQGITGIEGPEGPKGFE------GPRGEPGAMGLSGEK 842

Query: 251 GKSGINGVPGTPAICAYKRESCSL 274
           GK G+ G  G P     K +  S+
Sbjct: 843 GKQGVQGFTGYPGPTGDKGDKGSV 866



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 66/143 (46%), Gaps = 24/143 (16%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------ 153
            QG      E    G+ G  G KGEIG  G  G  G++G+ G PG  GPPGP+G       
Sbjct: 1031 QGLSGFPGERGMMGMPGLPGLKGEIGVPGNSGPVGDKGQPGEPGKEGPPGPEGRRGQTGP 1090

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGR 198
            PG  G +G +GDMG  GP G  G  G+R               G KGDMG PG  G  G 
Sbjct: 1091 PGSVGLKGERGDMGLMGPIGRDGLPGQRGLTGPPGPQGPPGEDGDKGDMGPPGEKGFKGA 1150

Query: 199  DGLPGEPGLDGIPGRNGMDGIPG 221
                GE G  G PG  G  G PG
Sbjct: 1151 Q---GEAGPTGSPGSQGSRGEPG 1170



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 99/274 (36%), Gaps = 105/274 (38%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAK------------GEMGVKGE------------ 135
            +GF  +  E  P G  G  G +GE GA             G  G KGE            
Sbjct: 1145 KGFKGAQGEAGPTGSPGSQGSRGEPGAAGPPGEKGPPGEMGRAGGKGEDGPTGLPGPPGA 1204

Query: 136  ------------RGEKGAPGVVGPPGPQGIPGDEGKRGP--------------------- 162
                        +G +G  G +GP GP G+PG+ G+RGP                     
Sbjct: 1205 SGPQGMPGPPGMKGGRGDDGPIGPAGPIGLPGEPGRRGPRGAEGGPGATGPAGPQGLAGE 1264

Query: 163  ------------------KGDMG---------------------YPGPQGI--------- 174
                              KG +G                       GP+G+         
Sbjct: 1265 PGAQGPPGPQGPEGKEGEKGSIGPKGEEGKSGPPGPPGKRGPAGAEGPKGVAGAQGFPGN 1324

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
            PG+ G  GPKGD G  G  G  G  GL GEPG  G+PG  G  G  G +G  G  G PG 
Sbjct: 1325 PGEPGVVGPKGDTGKDGEDGKQGEPGLSGEPGPVGLPGEMGSPGKMGPEGPAGSQGTPGL 1384

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G++G+ GP GN G +G  G+PG   +   +
Sbjct: 1385 PGEKGDRGLPGPAGNIGITGPQGMPGPQGLTGLR 1418



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 64/122 (52%), Gaps = 12/122 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G +G  GA GE+G  G+ GE G  G +G  G +G  GD GKRGPKG  G  G 
Sbjct: 1409 PGPQGLTGLRGSPGASGEIGPTGKSGETGPAGKIGETGAKGQKGDRGKRGPKGHRGELGM 1468

Query: 172  QGIPGDEGKRGPKGDMGYPG------------RIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G+ GD G++G KG  G  G             +GL G DG  G PG DG  G  G +G+
Sbjct: 1469 VGLKGDMGEKGDKGSRGNQGIDGPKGPPGPVGPLGLKGNDGPQGTPGGDGPLGPKGSEGV 1528

Query: 220  PG 221
             G
Sbjct: 1529 AG 1530



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 80/172 (46%), Gaps = 24/172 (13%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG--------- 158
            E   PG  GP G  G  G  G  G KG+RG  G  G +G  GPQG+PG +G         
Sbjct: 1363 EMGSPGKMGPEGPAGSQGTPGLPGEKGDRGLPGPAGNIGITGPQGMPGPQGLTGLRGSPG 1422

Query: 159  ------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
                        + GP G +G  G +G  GD GKRGPKG  G  G +GL G     GE G
Sbjct: 1423 ASGEIGPTGKSGETGPAGKIGETGAKGQKGDRGKRGPKGHRGELGMVGLKGDM---GEKG 1479

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
              G  G  G+DG  G  G  G  G+ G +G  G  G  GP G +G  G+ G+
Sbjct: 1480 DKGSRGNQGIDGPKGPPGPVGPLGLKGNDGPQGTPGGDGPLGPKGSEGVAGM 1531



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 89/253 (35%), Gaps = 81/253 (32%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG------------------ 137
           L  +QG          PG+ G  G++G IG  GE G +G  G                  
Sbjct: 598 LAGLQGLKGEPGPIGLPGIPGEKGERGRIGHAGEKGAQGHEGIQGEDGPPGLPGLPGELG 657

Query: 138 ---------------------EKGAPGVVGPPGPQGIPGDEGKR---------------- 160
                                 +G PGV G PGPQG PG  G+                 
Sbjct: 658 PRGFTGGRGFPGPPGNPGLPGTEGLPGVKGNPGPQGQPGAPGQTGPTGPIGPPGPQGNMG 717

Query: 161 --------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                               G  G  G PG  G  GD+G +G +G +G+PG  G  G DG
Sbjct: 718 PPGIPGPHGKPGLPGLPGADGAPGREGNPGIVGPKGDQGPQGVQGSIGFPGNRGPKGDDG 777

Query: 201 LPGEPGLDGIPGRNGMD------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G PG  G  G  G D      G  G+ G  G  GI G  G  G KG  GPRG  G  G
Sbjct: 778 ERGAPGDRGEKGERGHDGEKGDMGPSGERGAIGPQGITGIEGPEGPKGFEGPRGEPGAMG 837

Query: 255 INGVPGTPAICAY 267
           ++G  G   +  +
Sbjct: 838 LSGEKGKQGVQGF 850



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 53/117 (45%), Gaps = 21/117 (17%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L  ++G   ++ E  P G  G  G  G+IG  G  G KG+RG++G  G  G  G  G+ G
Sbjct: 1414 LTGLRGSPGASGEIGPTGKSGETGPAGKIGETGAKGQKGDRGKRGPKGHRGELGMVGLKG 1473

Query: 156  DEGKRGPKGDMGYP---------------------GPQGIPGDEGKRGPKGDMGYPG 191
            D G++G KG  G                       GPQG PG +G  GPKG  G  G
Sbjct: 1474 DMGEKGDKGSRGNQGIDGPKGPPGPVGPLGLKGNDGPQGTPGGDGPLGPKGSEGVAG 1530



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 76/212 (35%), Gaps = 90/212 (42%)

Query: 139 KGAPGVVGPPGPQGIPGDEGK------------------RGPKGDMGYPGPQGIPGDEGK 180
           KG PG +G PGP+G+ G  G                    G +G  G PGP G+PG  G+
Sbjct: 560 KGEPGDIGEPGPRGLRGPAGLPGREGRRGRAGRDGERGLAGLQGLKGEPGPIGLPGIPGE 619

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGE------------------------------------ 204
           +G +G +G+ G  G  G +G+ GE                                    
Sbjct: 620 KGERGRIGHAGEKGAQGHEGIQGEDGPPGLPGLPGELGPRGFTGGRGFPGPPGNPGLPGT 679

Query: 205 ---PGLDGIPGRNGMDGIPGKD------------------------------GLPGKDGI 231
              PG+ G PG  G  G PG+                               GLPG DG 
Sbjct: 680 EGLPGVKGNPGPQGQPGAPGQTGPTGPIGPPGPQGNMGPPGIPGPHGKPGLPGLPGADGA 739

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG  G     G+ GP+G++G  G+ G  G P 
Sbjct: 740 PGREGN---PGIVGPKGDQGPQGVQGSIGFPG 768



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 91/217 (41%), Gaps = 48/217 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------R 160
           GLQG  G+ G IG  G  G KGERG  G  G  G  G +GI G++G             R
Sbjct: 600 GLQGLKGEPGPIGLPGIPGEKGERGRIGHAGEKGAQGHEGIQGEDGPPGLPGLPGELGPR 659

Query: 161 G---------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----------- 200
           G         P G+ G PG +G+PG +G  GP+G  G PG+ G  G  G           
Sbjct: 660 GFTGGRGFPGPPGNPGLPGTEGLPGVKGNPGPQGQPGAPGQTGPTGPIGPPGPQGNMGPP 719

Query: 201 ----------LPGEPGLDGIPGRNGMDGI------PGKDGLPGKDGIPGTNGTNGEKGMT 244
                     LPG PG DG PGR G  GI       G  G+ G  G PG  G  G+ G  
Sbjct: 720 GIPGPHGKPGLPGLPGADGAPGREGNPGIVGPKGDQGPQGVQGSIGFPGNRGPKGDDGER 779

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
           G  G+RG+ G  G  G         E  ++ P   T 
Sbjct: 780 GAPGDRGEKGERGHDGEKGDMGPSGERGAIGPQGITG 816



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 83/231 (35%), Gaps = 81/231 (35%)

Query: 121 KGEIGAKGEMGVKGERGEKGAP---------------------GVVGPPGPQGIPGDEGK 159
           KGE G  GE G +G RG  G P                     G+ G PGP G+PG  G+
Sbjct: 560 KGEPGDIGEPGPRGLRGPAGLPGREGRRGRAGRDGERGLAGLQGLKGEPGPIGLPGIPGE 619

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDM-------------------------------- 187
           +G +G +G+ G +G  G EG +G  G                                  
Sbjct: 620 KGERGRIGHAGEKGAQGHEGIQGEDGPPGLPGLPGELGPRGFTGGRGFPGPPGNPGLPGT 679

Query: 188 -GYPGRIGLDGRDGLPGEPG---------------------------LDGIPGRNGMDGI 219
            G PG  G  G  G PG PG                             G+PG  G DG 
Sbjct: 680 EGLPGVKGNPGPQGQPGAPGQTGPTGPIGPPGPQGNMGPPGIPGPHGKPGLPGLPGADGA 739

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           PG++G PG  G  G  G  G +G  G  GNRG  G +G  G P     K E
Sbjct: 740 PGREGNPGIVGPKGDQGPQGVQGSIGFPGNRGPKGDDGERGAPGDRGEKGE 790


>gi|17568911|ref|NP_510664.1| Protein LET-2, isoform a [Caenorhabditis elegans]
 gi|351061152|emb|CCD68906.1| Protein LET-2, isoform a [Caenorhabditis elegans]
          Length = 1758

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 91/168 (54%), Gaps = 25/168 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G KG++G  G  G+ G++GE G  GV G PG  G PG       KGD G PG 
Sbjct: 790 PGLPGIPGPKGDVGNPGLPGLNGQKGEPGV-GVPGQPGSPGFPGL------KGDAGLPGL 842

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------EPGLDGIPGRNGMDGI 219
            G PG EG+RG      +PG  GL G DGLPG            + GL G+PGR G  G 
Sbjct: 843 PGTPGLEGQRG------FPGAPGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGF 896

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           PG+DGLPG  G+ G +G  G  G+TG +G+ G  G +G PG P    Y
Sbjct: 897 PGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAPGY 944



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 90/185 (48%), Gaps = 32/185 (17%)

Query: 119  GQKGEIGAK---------------GEMGVKGERGEKGAPGVVGPPGP---------QGIP 154
            G  G  G K               G  G+KG+RG  G PG  G  GP          G+P
Sbjct: 982  GMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGEAGPAARDGQKGDAGLP 1041

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDE-----GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            G  G RGP+G  G PG  G  G+      G+ G  G+ G PG  G  GR G PG PG DG
Sbjct: 1042 GQPGLRGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDG 1101

Query: 210  IPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            +PG  GM    G PG+DGLPG+DG+PG  G  G+ G +G  G  G  G++G PG P I  
Sbjct: 1102 LPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRG 1161

Query: 267  YKRES 271
             K + 
Sbjct: 1162 DKGQG 1166



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 95/184 (51%), Gaps = 32/184 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG-----ERGEKGAPGVVGPPGPQGIPGDEGKRG----P- 162
            G QGP G  G  G KGE G+ G     + GEKG PG+ G  G QG PG  G+ G    P 
Sbjct: 1048 GPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDGLPGFPG 1107

Query: 163  -KGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             KG+ GYPG  G+PG +   G  G KGD+G  G+ GL G  GL G+PG+ GI G  G  G
Sbjct: 1108 MKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGG 1167

Query: 219  IPGKDGLPGKDGIPGTNGTNG------------EKGMTGP------RGNRGKSGINGVPG 260
            +PG  G  G DG PG  G NG            EKG  G       +G+ G  G +G+PG
Sbjct: 1168 LPGIPGDRGMDGYPGQKGENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPG 1227

Query: 261  TPAI 264
             P +
Sbjct: 1228 IPGL 1231



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL G  GQKGE G    +GV G+ G  G PG+    G PG  G PG EG+RG  G  G 
Sbjct: 805 PGLPGLNGQKGEPG----VGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGL 860

Query: 169 PGPQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-- 223
            G  G+PG  G+ G    KGD G PG  G +G  G PG+ GL G+PG  G DG+PG    
Sbjct: 861 KGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGV 920

Query: 224 -GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL G  G PG +G  G  G  G  G +G +GI GVPG
Sbjct: 921 TGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPG 958



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 94/196 (47%), Gaps = 22/196 (11%)

Query: 82  NNPWV-WLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG 140
            NP +  LN     P V + G   S      PG  G  G  G  G  G  G++G+RG  G
Sbjct: 803 GNPGLPGLNGQKGEPGVGVPGQPGS------PGFPGLKGDAGLPGLPGTPGLEGQRGFPG 856

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           APG+ G  G  G+ G  G  G KGD G PG   +PG EG  G  G  G PG  G+ G DG
Sbjct: 857 APGLKGGDGLPGLSGQPGYPGEKGDAGLPG---VPGREGSPGFPGQDGLPGVPGMKGEDG 913

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG------------PRG 248
           LPG PG+ G+ G  G  G  G  GLPG  G PG  G  G  G+ G              G
Sbjct: 914 LPGLPGVTGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNG 973

Query: 249 NRGKSGINGVPGTPAI 264
            +G+ G+ G+PGTP +
Sbjct: 974 PKGEPGVPGMPGTPGM 989



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 65/117 (55%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G+PG +G+ G  G  G PG +G  G  G  G KGD+G  G  G  G DGLPG PG DG P
Sbjct: 1289 GLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQP 1348

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G+ G  G  GLPG+ G PG  G  GE G+ G  G +G++G  G PG P     K
Sbjct: 1349 GIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEK 1405



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 80/175 (45%), Gaps = 29/175 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG------------------------IPGDEGKR 160
           G KGE G  G  GE G PG  G PG +G                        +PG  G  
Sbjct: 737 GTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIP 796

Query: 161 GPKGDMGYPGPQGIPGDEGKRG-----PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           GPKGD+G PG  G+ G +G+ G       G  G+PG  G  G  GLPG PGL+G  G  G
Sbjct: 797 GPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPG 856

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G+ G DGLPG  G PG  G  G+ G+ G  G  G  G  G  G P +   K E
Sbjct: 857 APGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGE 911



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 85/162 (52%), Gaps = 19/162 (11%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------KRGPKGDMGYP 169
           G+ G  G  G KGE G  G PG VG PG  G+PG +G              G  GD G+ 
Sbjct: 728 GQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGF- 786

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
              G+PG  G  GPKGD+G PG  GL+G+    GEPG+ G+PG+ G  G PG  G  G  
Sbjct: 787 --GGVPGLPGIPGPKGDVGNPGLPGLNGQK---GEPGV-GVPGQPGSPGFPGLKGDAGLP 840

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G+PGT G  G++G  G  G +G  G+ G+ G P     K ++
Sbjct: 841 GLPGTPGLEGQRGFPGAPGLKGGDGLPGLSGQPGYPGEKGDA 882



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 77/149 (51%), Gaps = 15/149 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G+ G  G  G+  + G  G+ G PG+ G PG +G  G  G RGP GD      
Sbjct: 439 PGLPGPKGEPGYRGTPGQS-IPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDS----L 493

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-----MDGIPGKDGLP 226
            G+PG  G+RG  G  GY GR   DG +GLPG PG  G   R G       G  G+ GLP
Sbjct: 494 NGLPGAPGQRGAPGPNGYDGR---DGVNGLPGAPGTKGD--RGGTCSACAPGTKGEKGLP 548

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G  G PG  G  G  GM GP G+ G  G+
Sbjct: 549 GYSGQPGPQGDRGLPGMPGPVGDAGDDGL 577



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 99/235 (42%), Gaps = 80/235 (34%)

Query: 113  GLQGPIGQKGEIGAKGE---------------MGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            GL G  GQKG++G  G+                G++G++G+ G PG+ G  G  G PG +
Sbjct: 1125 GLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGGLPGIPGDRGMDGYPGQK 1184

Query: 158  GKRG-------------------P-----KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            G+ G                   P     KG  GYPG  G+PG  G    KGD G+PG+ 
Sbjct: 1185 GENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPGIPGL---KGDSGFPGQP 1241

Query: 194  GLDGRDGLPGE-----------------------------------PGLDGIPGRNGMDG 218
            G +G  GL GE                                   PGL G  G +G+ G
Sbjct: 1242 GQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSG 1301

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP---GTPAICAYKRE 270
            +PG  GL G+ G+PG  G  G+ G  G  G RG+ G+ GVP   G P I   K E
Sbjct: 1302 LPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGE 1356



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 90/193 (46%), Gaps = 59/193 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL+G  G  G  GAKG++   G+ G+RGE G PGV G  G  GIPG +G+ G  G  G 
Sbjct: 1306 PGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPGQ 1365

Query: 169  PGPQGIPGDEGKR------GPKGDMGYPGRIGLDG---------------RDGL------ 201
            PG  GIPG +G+       G KG+ G+PG  G+ G               RDGL      
Sbjct: 1366 PGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGLPGLPGRDGLPGADGP 1425

Query: 202  --------------PGE---PGLDGIPGRNGMDGIPGKDGLP------------GKDGIP 232
                          PGE   PGL G PG  G  G+PG DG P            G DG P
Sbjct: 1426 VGPPGPSGPQNLVEPGEKGLPGLPGAPGLRGEKGMPGLDGPPGNDGPPGLPGQRGNDGYP 1485

Query: 233  GTNGTNGEKGMTG 245
            G  G +GEKGM G
Sbjct: 1486 GAPGLSGEKGMGG 1498



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 67/131 (51%), Gaps = 15/131 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G+ G  G  G  G+KGE G  G PG  G  G  GIPG       +G+ G PG 
Sbjct: 1288 PGLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGK------RGEDGLPG- 1340

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
              +PG +G+       G PG  G  G  GLPG+PG  GIPG  G  G+PG  G  G+ G 
Sbjct: 1341 --VPGRDGQ------PGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGF 1392

Query: 232  PGTNGTNGEKG 242
            PGT G  G  G
Sbjct: 1393 PGTPGVPGYAG 1403



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 70/147 (47%), Gaps = 18/147 (12%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GV G  G  G PG  G PG +G PG           G PG  G PG +G  G KG+ 
Sbjct: 428 GAPGVSGPSGIPGLPGPKGEPGYRGTPGQS-------IPGLPGKDGKPGLDGAPGRKGEN 480

Query: 188 GYPGRIGLDGR--DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG---------TNG 236
           G PG  G  G   +GLPG PG  G PG NG DG  G +GLPG  G  G           G
Sbjct: 481 GLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGRDGVNGLPGAPGTKGDRGGTCSACAPG 540

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           T GEKG+ G  G  G  G  G+PG P 
Sbjct: 541 TKGEKGLPGYSGQPGPQGDRGLPGMPG 567



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 85/186 (45%), Gaps = 39/186 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL G  G  GE G  G  GV G  G      + G PGV G  G  G+PG  G  G KGD
Sbjct: 867  PGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGD 926

Query: 166  MGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGR------------DGLPGEPGLDGI 210
            +G PG     G+PG  G  G KG+ G PG  G  G              G PG PG+ G 
Sbjct: 927  LGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNGPKGEPGVPGMPGT 986

Query: 211  PG------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            PG            R+G+ G+PG  G  G +G+P      GEKG  GP    G+ G  G+
Sbjct: 987  PGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLP------GEKGEAGPAARDGQKGDAGL 1040

Query: 259  PGTPAI 264
            PG P +
Sbjct: 1041 PGQPGL 1046



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 62/142 (43%), Positives = 72/142 (50%), Gaps = 10/142 (7%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  G  G  G KG+RG+ G  G  GPPG  G PG+ G       +G  GP+G PGD G  
Sbjct: 182 GPSGRDGYPGEKGDRGDTGNAGPRGPPGEAGSPGNPG-------IGSIGPKGDPGDLGSV 234

Query: 182 GPKGDMG---YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           GP G  G   + G   + G  G PGE G  G PG  G  G PG  GL G+ G+PG  G  
Sbjct: 235 GPPGPPGPREFTGSGSIVGPRGNPGEKGDKGEPGEGGQRGYPGNGGLSGQPGLPGMKGEK 294

Query: 239 GEKGMTGPRGNRGKSGINGVPG 260
           G  G  GPRG  G+ G  G PG
Sbjct: 295 GLSGPAGPRGKEGRPGNAGPPG 316



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 67/143 (46%), Gaps = 35/143 (24%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG--------PQGIPGDEGK------ 159
           L GP G+ G  G KG+ G  G  G +G PG  G PG        P+G PGD G       
Sbjct: 180 LPGPSGRDGYPGEKGDRGDTGNAGPRGPPGEAGSPGNPGIGSIGPKGDPGDLGSVGPPGP 239

Query: 160 ------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GE 204
                        GP+G+ G  G +G PG+ G+R      GYPG  GL G+ GLP   GE
Sbjct: 240 PGPREFTGSGSIVGPRGNPGEKGDKGEPGEGGQR------GYPGNGGLSGQPGLPGMKGE 293

Query: 205 PGLDGIPGRNGMDGIPGKDGLPG 227
            GL G  G  G +G PG  G PG
Sbjct: 294 KGLSGPAGPRGKEGRPGNAGPPG 316



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 84/169 (49%), Gaps = 30/169 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGE G  G  GV G +G+ GAPG  G PG   +PG  G  G KG+ G PG  
Sbjct: 901  GLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPG---LPGAPGYPGMKGNAGIPG-- 955

Query: 173  GIPG---------DEGKRGPKGDMGYPGRIGLDG------------RDGLPGEPGLDGIP 211
             +PG           G  GPKG+ G PG  G  G            RDGL G PG+ G  
Sbjct: 956  -VPGFKGDGGLPGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDR 1014

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G NG+ G  G+ G   +DG  G  G  G+ G+   RG +G SG+ GVPG
Sbjct: 1015 GFNGLPGEKGEAGPAARDGQKGDAGLPGQPGL---RGPQGPSGLPGVPG 1060



 Score = 46.2 bits (108), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 84/194 (43%), Gaps = 46/194 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGK 159
           PGL G  GQ G  G  G  G  G  G+ G PG  G             PG QG+PG+   
Sbjct: 660 PGLSGKPGQDGLPGLPGNKGEAG-YGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAP 718

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------- 209
                +   P P G PG  G  G KG+ GYPGR G  G+ G PG PG+ G          
Sbjct: 719 E----NQVNPAPPGQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGL 774

Query: 210 -----------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR--------GNR 250
                        G  G+ GIPG  G  G  G+PG NG  GE G+  P         G +
Sbjct: 775 PGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLK 834

Query: 251 GKSGINGVPGTPAI 264
           G +G+ G+PGTP +
Sbjct: 835 GDAGLPGLPGTPGL 848



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 65/143 (45%), Gaps = 32/143 (22%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG--------PKGDMG----------- 188
           PGP G  G  G++G +GD G  GP+G PG+ G  G        PKGD G           
Sbjct: 181 PGPSGRDGYPGEKGDRGDTGNAGPRGPPGEAGSPGNPGIGSIGPKGDPGDLGSVGPPGPP 240

Query: 189 ----YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEK 241
               + G   + G  G PGE G  G PG  G      + G PG  G+   PG  G  GEK
Sbjct: 241 GPREFTGSGSIVGPRGNPGEKGDKGEPGEGG------QRGYPGNGGLSGQPGLPGMKGEK 294

Query: 242 GMTGPRGNRGKSGINGVPGTPAI 264
           G++GP G RGK G  G  G P  
Sbjct: 295 GLSGPAGPRGKEGRPGNAGPPGF 317



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 76/173 (43%), Gaps = 52/173 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----- 167
           GL G  G KG+ G        G +GEKG PG  G PGPQG  G  G  GP GD G     
Sbjct: 519 GLPGAPGTKGDRGGTCSACAPGTKGEKGLPGYSGQPGPQGDRGLPGMPGPVGDAGDDGLP 578

Query: 168 ----------------YPGPQGIPGDEG-------KRGPKGDMGYPGRIGLDGRDGLPGE 204
                           +PG   +PG +G       + GP      PG  GL G +G PG+
Sbjct: 579 GPAGRPGSPGPPGQDGFPG---LPGQKGEPTQLTLRPGP------PGYPGLKGENGFPGQ 629

Query: 205 PGLDGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           PG+DG+PG                 G  G+PG  G PG+DG+PG  G  GE G
Sbjct: 630 PGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPGLPGNKGEAG 682


>gi|584868|sp|P17140.2|CO4A2_CAEEL RecName: Full=Collagen alpha-2(IV) chain; AltName: Full=Lethal
           protein 2; Flags: Precursor
 gi|953172|emb|CAA80536.1| a2(IV) collagen [Caenorhabditis elegans]
          Length = 1758

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 91/168 (54%), Gaps = 25/168 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G KG++G  G  G+ G++GE G  GV G PG  G PG       KGD G PG 
Sbjct: 790 PGLPGIPGPKGDVGNPGLPGLNGQKGEPGV-GVPGQPGSPGFPGL------KGDAGLPGL 842

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------EPGLDGIPGRNGMDGI 219
            G PG EG+RG      +PG  GL G DGLPG            + GL G+PGR G  G 
Sbjct: 843 PGTPGLEGQRG------FPGAPGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGF 896

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           PG+DGLPG  G+ G +G  G  G+TG +G+ G  G +G PG P    Y
Sbjct: 897 PGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAPGY 944



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 90/185 (48%), Gaps = 32/185 (17%)

Query: 119  GQKGEIGAK---------------GEMGVKGERGEKGAPGVVGPPGP---------QGIP 154
            G  G  G K               G  G+KG+RG  G PG  G  GP          G+P
Sbjct: 982  GMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGEAGPAARDGQKGDAGLP 1041

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDE-----GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            G  G RGP+G  G PG  G  G+      G+ G  G+ G PG  G  GR G PG PG DG
Sbjct: 1042 GQPGLRGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDG 1101

Query: 210  IPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            +PG  GM    G PG+DGLPG+DG+PG  G  G+ G +G  G  G  G++G PG P I  
Sbjct: 1102 LPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRG 1161

Query: 267  YKRES 271
             K + 
Sbjct: 1162 DKGQG 1166



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 95/184 (51%), Gaps = 32/184 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG-----ERGEKGAPGVVGPPGPQGIPGDEGKRG----P- 162
            G QGP G  G  G KGE G+ G     + GEKG PG+ G  G QG PG  G+ G    P 
Sbjct: 1048 GPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDGLPGFPG 1107

Query: 163  -KGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             KG+ GYPG  G+PG +   G  G KGD+G  G+ GL G  GL G+PG+ GI G  G  G
Sbjct: 1108 MKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGG 1167

Query: 219  IPGKDGLPGKDGIPGTNGTNG------------EKGMTGP------RGNRGKSGINGVPG 260
            +PG  G  G DG PG  G NG            EKG  G       +G+ G  G +G+PG
Sbjct: 1168 LPGIPGDRGMDGYPGQKGENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPG 1227

Query: 261  TPAI 264
             P +
Sbjct: 1228 IPGL 1231



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL G  GQKGE G    +GV G+ G  G PG+    G PG  G PG EG+RG  G  G 
Sbjct: 805 PGLPGLNGQKGEPG----VGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGL 860

Query: 169 PGPQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-- 223
            G  G+PG  G+ G    KGD G PG  G +G  G PG+ GL G+PG  G DG+PG    
Sbjct: 861 KGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGV 920

Query: 224 -GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL G  G PG +G  G  G  G  G +G +GI GVPG
Sbjct: 921 TGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPG 958



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 94/196 (47%), Gaps = 22/196 (11%)

Query: 82  NNPWV-WLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG 140
            NP +  LN     P V + G   S      PG  G  G  G  G  G  G++G+RG  G
Sbjct: 803 GNPGLPGLNGQKGEPGVGVPGQPGS------PGFPGLKGDAGLPGLPGTPGLEGQRGFPG 856

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           APG+ G  G  G+ G  G  G KGD G PG   +PG EG  G  G  G PG  G+ G DG
Sbjct: 857 APGLKGGDGLPGLSGQPGYPGEKGDAGLPG---VPGREGSPGFPGQDGLPGVPGMKGEDG 913

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG------------PRG 248
           LPG PG+ G+ G  G  G  G  GLPG  G PG  G  G  G+ G              G
Sbjct: 914 LPGLPGVTGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNG 973

Query: 249 NRGKSGINGVPGTPAI 264
            +G+ G+ G+PGTP +
Sbjct: 974 PKGEPGVPGMPGTPGM 989



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 65/117 (55%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G+PG +G+ G  G  G PG +G  G  G  G KGD+G  G  G  G DGLPG PG DG P
Sbjct: 1289 GLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQP 1348

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G+ G  G  GLPG+ G PG  G  GE G+ G  G +G++G  G PG P     K
Sbjct: 1349 GIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEK 1405



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 80/175 (45%), Gaps = 29/175 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG------------------------IPGDEGKR 160
           G KGE G  G  GE G PG  G PG +G                        +PG  G  
Sbjct: 737 GTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIP 796

Query: 161 GPKGDMGYPGPQGIPGDEGKRG-----PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           GPKGD+G PG  G+ G +G+ G       G  G+PG  G  G  GLPG PGL+G  G  G
Sbjct: 797 GPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPG 856

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G+ G DGLPG  G PG  G  G+ G+ G  G  G  G  G  G P +   K E
Sbjct: 857 APGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGE 911



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 85/162 (52%), Gaps = 19/162 (11%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------KRGPKGDMGYP 169
           G+ G  G  G KGE G  G PG VG PG  G+PG +G              G  GD G+ 
Sbjct: 728 GQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGF- 786

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
              G+PG  G  GPKGD+G PG  GL+G+    GEPG+ G+PG+ G  G PG  G  G  
Sbjct: 787 --GGVPGLPGIPGPKGDVGNPGLPGLNGQK---GEPGV-GVPGQPGSPGFPGLKGDAGLP 840

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G+PGT G  G++G  G  G +G  G+ G+ G P     K ++
Sbjct: 841 GLPGTPGLEGQRGFPGAPGLKGGDGLPGLSGQPGYPGEKGDA 882



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 77/149 (51%), Gaps = 15/149 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G+ G  G  G+  + G  G+ G PG+ G PG +G  G  G RGP GD      
Sbjct: 439 PGLPGPKGEPGYRGTPGQS-IPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDS----L 493

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-----MDGIPGKDGLP 226
            G+PG  G+RG  G  GY GR   DG +GLPG PG  G   R G       G  G+ GLP
Sbjct: 494 NGLPGAPGQRGAPGPNGYDGR---DGVNGLPGAPGTKGD--RGGTCSACAPGTKGEKGLP 548

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G  G PG  G  G  GM GP G+ G  G+
Sbjct: 549 GYSGQPGPQGDRGLPGMPGPVGDAGDDGL 577



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 99/235 (42%), Gaps = 80/235 (34%)

Query: 113  GLQGPIGQKGEIGAKGE---------------MGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            GL G  GQKG++G  G+                G++G++G+ G PG+ G  G  G PG +
Sbjct: 1125 GLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGGLPGIPGDRGMDGYPGQK 1184

Query: 158  GKRG-------------------P-----KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            G+ G                   P     KG  GYPG  G+PG  G    KGD G+PG+ 
Sbjct: 1185 GENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPGIPGL---KGDSGFPGQP 1241

Query: 194  GLDGRDGLPGE-----------------------------------PGLDGIPGRNGMDG 218
            G +G  GL GE                                   PGL G  G +G+ G
Sbjct: 1242 GQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSG 1301

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP---GTPAICAYKRE 270
            +PG  GL G+ G+PG  G  G+ G  G  G RG+ G+ GVP   G P I   K E
Sbjct: 1302 LPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGE 1356



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 90/193 (46%), Gaps = 59/193 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL+G  G  G  GAKG++   G+ G+RGE G PGV G  G  GIPG +G+ G  G  G 
Sbjct: 1306 PGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPGQ 1365

Query: 169  PGPQGIPGDEGKR------GPKGDMGYPGRIGLDG---------------RDGL------ 201
            PG  GIPG +G+       G KG+ G+PG  G+ G               RDGL      
Sbjct: 1366 PGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGLPGLPGRDGLPGADGP 1425

Query: 202  --------------PGE---PGLDGIPGRNGMDGIPGKDGLP------------GKDGIP 232
                          PGE   PGL G PG  G  G+PG DG P            G DG P
Sbjct: 1426 VGPPGPSGPQNLVEPGEKGLPGLPGAPGLRGEKGMPGLDGPPGNDGPPGLPGQRGNDGYP 1485

Query: 233  GTNGTNGEKGMTG 245
            G  G +GEKGM G
Sbjct: 1486 GAPGLSGEKGMGG 1498



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 67/131 (51%), Gaps = 15/131 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G+ G  G  G  G+KGE G  G PG  G  G  GIPG       +G+ G PG 
Sbjct: 1288 PGLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGK------RGEDGLPG- 1340

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
              +PG +G+       G PG  G  G  GLPG+PG  GIPG  G  G+PG  G  G+ G 
Sbjct: 1341 --VPGRDGQ------PGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGF 1392

Query: 232  PGTNGTNGEKG 242
            PGT G  G  G
Sbjct: 1393 PGTPGVPGYAG 1403



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 70/147 (47%), Gaps = 18/147 (12%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GV G  G  G PG  G PG +G PG           G PG  G PG +G  G KG+ 
Sbjct: 428 GAPGVSGPSGIPGLPGPKGEPGYRGTPGQS-------IPGLPGKDGKPGLDGAPGRKGEN 480

Query: 188 GYPGRIGLDGR--DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG---------TNG 236
           G PG  G  G   +GLPG PG  G PG NG DG  G +GLPG  G  G           G
Sbjct: 481 GLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGRDGVNGLPGAPGTKGDRGGTCSACAPG 540

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           T GEKG+ G  G  G  G  G+PG P 
Sbjct: 541 TKGEKGLPGYSGQPGPQGDRGLPGMPG 567



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 85/186 (45%), Gaps = 39/186 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL G  G  GE G  G  GV G  G      + G PGV G  G  G+PG  G  G KGD
Sbjct: 867  PGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGD 926

Query: 166  MGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGR------------DGLPGEPGLDGI 210
            +G PG     G+PG  G  G KG+ G PG  G  G              G PG PG+ G 
Sbjct: 927  LGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNGPKGEPGVPGMPGT 986

Query: 211  PG------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            PG            R+G+ G+PG  G  G +G+P      GEKG  GP    G+ G  G+
Sbjct: 987  PGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLP------GEKGEAGPAARDGQKGDAGL 1040

Query: 259  PGTPAI 264
            PG P +
Sbjct: 1041 PGQPGL 1046



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 62/142 (43%), Positives = 72/142 (50%), Gaps = 10/142 (7%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  G  G  G KG+RG+ G  G  GPPG  G PG+ G       +G  GP+G PGD G  
Sbjct: 182 GPSGRDGYPGEKGDRGDTGNAGPRGPPGEAGSPGNPG-------IGSIGPKGDPGDLGSV 234

Query: 182 GPKGDMG---YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           GP G  G   + G   + G  G PGE G  G PG  G  G PG  GL G+ G+PG  G  
Sbjct: 235 GPPGPPGPREFTGSGSIVGPRGNPGEKGDKGEPGEGGQRGYPGNGGLSGQPGLPGMKGEK 294

Query: 239 GEKGMTGPRGNRGKSGINGVPG 260
           G  G  GPRG  G+ G  G PG
Sbjct: 295 GLSGPAGPRGKEGRPGNAGPPG 316



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 67/143 (46%), Gaps = 35/143 (24%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG--------PQGIPGDEGK------ 159
           L GP G+ G  G KG+ G  G  G +G PG  G PG        P+G PGD G       
Sbjct: 180 LPGPSGRDGYPGEKGDRGDTGNAGPRGPPGEAGSPGNPGIGSIGPKGDPGDLGSVGPPGP 239

Query: 160 ------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GE 204
                        GP+G+ G  G +G PG+ G+R      GYPG  GL G+ GLP   GE
Sbjct: 240 PGPREFTGSGSIVGPRGNPGEKGDKGEPGEGGQR------GYPGNGGLSGQPGLPGMKGE 293

Query: 205 PGLDGIPGRNGMDGIPGKDGLPG 227
            GL G  G  G +G PG  G PG
Sbjct: 294 KGLSGPAGPRGKEGRPGNAGPPG 316



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 84/169 (49%), Gaps = 30/169 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGE G  G  GV G +G+ GAPG  G PG   +PG  G  G KG+ G PG  
Sbjct: 901  GLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPG---LPGAPGYPGMKGNAGIPG-- 955

Query: 173  GIPG---------DEGKRGPKGDMGYPGRIGLDG------------RDGLPGEPGLDGIP 211
             +PG           G  GPKG+ G PG  G  G            RDGL G PG+ G  
Sbjct: 956  -VPGFKGDGGLPGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDR 1014

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G NG+ G  G+ G   +DG  G  G  G+ G+   RG +G SG+ GVPG
Sbjct: 1015 GFNGLPGEKGEAGPAARDGQKGDAGLPGQPGL---RGPQGPSGLPGVPG 1060



 Score = 46.2 bits (108), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 84/194 (43%), Gaps = 46/194 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGK 159
           PGL G  GQ G  G  G  G  G  G+ G PG  G             PG QG+PG+   
Sbjct: 660 PGLSGKPGQDGLPGLPGNKGEAG-YGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAP 718

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------- 209
                +   P P G PG  G  G KG+ GYPGR G  G+ G PG PG+ G          
Sbjct: 719 E----NQVNPAPPGQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGL 774

Query: 210 -----------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR--------GNR 250
                        G  G+ GIPG  G  G  G+PG NG  GE G+  P         G +
Sbjct: 775 PGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLK 834

Query: 251 GKSGINGVPGTPAI 264
           G +G+ G+PGTP +
Sbjct: 835 GDAGLPGLPGTPGL 848



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 65/143 (45%), Gaps = 32/143 (22%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG--------PKGDMG----------- 188
           PGP G  G  G++G +GD G  GP+G PG+ G  G        PKGD G           
Sbjct: 181 PGPSGRDGYPGEKGDRGDTGNAGPRGPPGEAGSPGNPGIGSIGPKGDPGDLGSVGPPGPP 240

Query: 189 ----YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEK 241
               + G   + G  G PGE G  G PG  G      + G PG  G+   PG  G  GEK
Sbjct: 241 GPREFTGSGSIVGPRGNPGEKGDKGEPGEGG------QRGYPGNGGLSGQPGLPGMKGEK 294

Query: 242 GMTGPRGNRGKSGINGVPGTPAI 264
           G++GP G RGK G  G  G P  
Sbjct: 295 GLSGPAGPRGKEGRPGNAGPPGF 317



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 76/173 (43%), Gaps = 52/173 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----- 167
           GL G  G KG+ G        G +GEKG PG  G PGPQG  G  G  GP GD G     
Sbjct: 519 GLPGAPGTKGDRGGTCSACAPGTKGEKGLPGYSGQPGPQGDRGLPGMPGPVGDAGDDGLP 578

Query: 168 ----------------YPGPQGIPGDEG-------KRGPKGDMGYPGRIGLDGRDGLPGE 204
                           +PG   +PG +G       + GP      PG  GL G +G PG+
Sbjct: 579 GPAGRPGSPGPPGQDGFPG---LPGQKGEPTQLTLRPGP------PGYPGLKGENGFPGQ 629

Query: 205 PGLDGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           PG+DG+PG                 G  G+PG  G PG+DG+PG  G  GE G
Sbjct: 630 PGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPGLPGNKGEAG 682


>gi|953173|emb|CAA80537.1| a2(IV) collagen [Caenorhabditis elegans]
          Length = 1759

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 91/168 (54%), Gaps = 25/168 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G KG++G  G  G+ G++GE G  GV G PG  G PG       KGD G PG 
Sbjct: 791 PGLPGIPGPKGDVGNPGLPGLNGQKGEPGV-GVPGQPGSPGFPGL------KGDAGLPGL 843

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------EPGLDGIPGRNGMDGI 219
            G PG EG+RG      +PG  GL G DGLPG            + GL G+PGR G  G 
Sbjct: 844 PGTPGLEGQRG------FPGAPGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGF 897

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           PG+DGLPG  G+ G +G  G  G+TG +G+ G  G +G PG P    Y
Sbjct: 898 PGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAPGY 945



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 90/185 (48%), Gaps = 32/185 (17%)

Query: 119  GQKGEIGAK---------------GEMGVKGERGEKGAPGVVGPPGP---------QGIP 154
            G  G  G K               G  G+KG+RG  G PG  G  GP          G+P
Sbjct: 983  GMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGEAGPAARDGQKGDAGLP 1042

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDE-----GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            G  G RGP+G  G PG  G  G+      G+ G  G+ G PG  G  GR G PG PG DG
Sbjct: 1043 GQPGLRGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDG 1102

Query: 210  IPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            +PG  GM    G PG+DGLPG+DG+PG  G  G+ G +G  G  G  G++G PG P I  
Sbjct: 1103 LPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRG 1162

Query: 267  YKRES 271
             K + 
Sbjct: 1163 DKGQG 1167



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL G  GQKGE G    +GV G+ G  G PG+    G PG  G PG EG+RG  G  G 
Sbjct: 806 PGLPGLNGQKGEPG----VGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGL 861

Query: 169 PGPQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-- 223
            G  G+PG  G+ G    KGD G PG  G +G  G PG+ GL G+PG  G DG+PG    
Sbjct: 862 KGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGV 921

Query: 224 -GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL G  G PG +G  G  G  G  G +G +GI GVPG
Sbjct: 922 TGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPG 959



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 95/184 (51%), Gaps = 32/184 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG-----ERGEKGAPGVVGPPGPQGIPGDEGKRG----P- 162
            G QGP G  G  G KGE G+ G     + GEKG PG+ G  G QG PG  G+ G    P 
Sbjct: 1049 GPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDGLPGFPG 1108

Query: 163  -KGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             KG+ GYPG  G+PG +   G  G KGD+G  G+ GL G  GL G+PG+ GI G  G  G
Sbjct: 1109 MKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGG 1168

Query: 219  IPGKDGLPGKDGIPGTNGTNG------------EKGMTGP------RGNRGKSGINGVPG 260
            +PG  G  G DG PG  G NG            EKG  G       +G+ G  G +G+PG
Sbjct: 1169 LPGIPGDRGMDGYPGQKGENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPG 1228

Query: 261  TPAI 264
             P +
Sbjct: 1229 IPGL 1232



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 94/196 (47%), Gaps = 22/196 (11%)

Query: 82  NNPWV-WLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG 140
            NP +  LN     P V + G   S      PG  G  G  G  G  G  G++G+RG  G
Sbjct: 804 GNPGLPGLNGQKGEPGVGVPGQPGS------PGFPGLKGDAGLPGLPGTPGLEGQRGFPG 857

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           APG+ G  G  G+ G  G  G KGD G PG   +PG EG  G  G  G PG  G+ G DG
Sbjct: 858 APGLKGGDGLPGLSGQPGYPGEKGDAGLPG---VPGREGSPGFPGQDGLPGVPGMKGEDG 914

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG------------PRG 248
           LPG PG+ G+ G  G  G  G  GLPG  G PG  G  G  G+ G              G
Sbjct: 915 LPGLPGVTGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNG 974

Query: 249 NRGKSGINGVPGTPAI 264
            +G+ G+ G+PGTP +
Sbjct: 975 PKGEPGVPGMPGTPGM 990



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 65/117 (55%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G+PG +G+ G  G  G PG +G  G  G  G KGD+G  G  G  G DGLPG PG DG P
Sbjct: 1290 GLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQP 1349

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G+ G  G  GLPG+ G PG  G  GE G+ G  G +G++G  G PG P     K
Sbjct: 1350 GIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEK 1406



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 85/162 (52%), Gaps = 19/162 (11%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------KRGPKGDMGYP 169
           G+ G  G  G KGE G  G PG VG PG  G+PG +G              G  GD G+ 
Sbjct: 729 GQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGF- 787

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
              G+PG  G  GPKGD+G PG  GL+G+    GEPG+ G+PG+ G  G PG  G  G  
Sbjct: 788 --GGVPGLPGIPGPKGDVGNPGLPGLNGQK---GEPGV-GVPGQPGSPGFPGLKGDAGLP 841

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G+PGT G  G++G  G  G +G  G+ G+ G P     K ++
Sbjct: 842 GLPGTPGLEGQRGFPGAPGLKGGDGLPGLSGQPGYPGEKGDA 883



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 80/175 (45%), Gaps = 29/175 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG------------------------IPGDEGKR 160
           G KGE G  G  GE G PG  G PG +G                        +PG  G  
Sbjct: 738 GTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIP 797

Query: 161 GPKGDMGYPGPQGIPGDEGKRG-----PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           GPKGD+G PG  G+ G +G+ G       G  G+PG  G  G  GLPG PGL+G  G  G
Sbjct: 798 GPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPG 857

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G+ G DGLPG  G PG  G  G+ G+ G  G  G  G  G  G P +   K E
Sbjct: 858 APGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGE 912



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 77/149 (51%), Gaps = 15/149 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G+ G  G  G+  + G  G+ G PG+ G PG +G  G  G RGP GD      
Sbjct: 440 PGLPGPKGEPGYRGTPGQS-IPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDS----L 494

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-----MDGIPGKDGLP 226
            G+PG  G+RG  G  GY GR   DG +GLPG PG  G   R G       G  G+ GLP
Sbjct: 495 NGLPGAPGQRGAPGPNGYDGR---DGVNGLPGAPGTKGD--RGGTCSACAPGTKGEKGLP 549

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G  G PG  G  G  GM GP G+ G  G+
Sbjct: 550 GYSGQPGPQGDRGLPGMPGPVGDAGDDGL 578



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 99/235 (42%), Gaps = 80/235 (34%)

Query: 113  GLQGPIGQKGEIGAKGE---------------MGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            GL G  GQKG++G  G+                G++G++G+ G PG+ G  G  G PG +
Sbjct: 1126 GLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGGLPGIPGDRGMDGYPGQK 1185

Query: 158  GKRG-------------------P-----KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            G+ G                   P     KG  GYPG  G+PG  G    KGD G+PG+ 
Sbjct: 1186 GENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPGIPGL---KGDSGFPGQP 1242

Query: 194  GLDGRDGLPGE-----------------------------------PGLDGIPGRNGMDG 218
            G +G  GL GE                                   PGL G  G +G+ G
Sbjct: 1243 GQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSG 1302

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP---GTPAICAYKRE 270
            +PG  GL G+ G+PG  G  G+ G  G  G RG+ G+ GVP   G P I   K E
Sbjct: 1303 LPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGE 1357



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 90/193 (46%), Gaps = 59/193 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL+G  G  G  GAKG++   G+ G+RGE G PGV G  G  GIPG +G+ G  G  G 
Sbjct: 1307 PGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPGQ 1366

Query: 169  PGPQGIPGDEGKR------GPKGDMGYPGRIGLDG---------------RDGL------ 201
            PG  GIPG +G+       G KG+ G+PG  G+ G               RDGL      
Sbjct: 1367 PGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGLPGLPGRDGLPGADGP 1426

Query: 202  --------------PGE---PGLDGIPGRNGMDGIPGKDGLP------------GKDGIP 232
                          PGE   PGL G PG  G  G+PG DG P            G DG P
Sbjct: 1427 VGPPGPSGPQNLVEPGEKGLPGLPGAPGLRGEKGMPGLDGPPGNDGPPGLPGQRGNDGYP 1486

Query: 233  GTNGTNGEKGMTG 245
            G  G +GEKGM G
Sbjct: 1487 GAPGLSGEKGMGG 1499



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 67/131 (51%), Gaps = 15/131 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G+ G  G  G  G+KGE G  G PG  G  G  GIPG       +G+ G PG 
Sbjct: 1289 PGLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGK------RGEDGLPG- 1341

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
              +PG +G+       G PG  G  G  GLPG+PG  GIPG  G  G+PG  G  G+ G 
Sbjct: 1342 --VPGRDGQ------PGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGF 1393

Query: 232  PGTNGTNGEKG 242
            PGT G  G  G
Sbjct: 1394 PGTPGVPGYAG 1404



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 70/147 (47%), Gaps = 18/147 (12%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GV G  G  G PG  G PG +G PG           G PG  G PG +G  G KG+ 
Sbjct: 429 GAPGVSGPSGIPGLPGPKGEPGYRGTPGQS-------IPGLPGKDGKPGLDGAPGRKGEN 481

Query: 188 GYPGRIGLDGR--DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG---------TNG 236
           G PG  G  G   +GLPG PG  G PG NG DG  G +GLPG  G  G           G
Sbjct: 482 GLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGRDGVNGLPGAPGTKGDRGGTCSACAPG 541

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           T GEKG+ G  G  G  G  G+PG P 
Sbjct: 542 TKGEKGLPGYSGQPGPQGDRGLPGMPG 568



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 85/186 (45%), Gaps = 39/186 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL G  G  GE G  G  GV G  G      + G PGV G  G  G+PG  G  G KGD
Sbjct: 868  PGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGD 927

Query: 166  MGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGR------------DGLPGEPGLDGI 210
            +G PG     G+PG  G  G KG+ G PG  G  G              G PG PG+ G 
Sbjct: 928  LGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNGPKGEPGVPGMPGT 987

Query: 211  PG------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            PG            R+G+ G+PG  G  G +G+P      GEKG  GP    G+ G  G+
Sbjct: 988  PGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLP------GEKGEAGPAARDGQKGDAGL 1041

Query: 259  PGTPAI 264
            PG P +
Sbjct: 1042 PGQPGL 1047



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 84/169 (49%), Gaps = 30/169 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGE G  G  GV G +G+ GAPG  G PG   +PG  G  G KG+ G PG  
Sbjct: 902  GLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPG---LPGAPGYPGMKGNAGIPG-- 956

Query: 173  GIPG---------DEGKRGPKGDMGYPGRIGLDG------------RDGLPGEPGLDGIP 211
             +PG           G  GPKG+ G PG  G  G            RDGL G PG+ G  
Sbjct: 957  -VPGFKGDGGLPGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDR 1015

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G NG+ G  G+ G   +DG  G  G  G+ G+   RG +G SG+ GVPG
Sbjct: 1016 GFNGLPGEKGEAGPAARDGQKGDAGLPGQPGL---RGPQGPSGLPGVPG 1061



 Score = 45.8 bits (107), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 84/194 (43%), Gaps = 46/194 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGK 159
           PGL G  GQ G  G  G  G  G  G+ G PG  G             PG QG+PG+   
Sbjct: 661 PGLSGKPGQDGLPGLPGNKGEAG-YGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAP 719

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------- 209
                +   P P G PG  G  G KG+ GYPGR G  G+ G PG PG+ G          
Sbjct: 720 E----NQVNPAPPGQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGL 775

Query: 210 -----------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR--------GNR 250
                        G  G+ GIPG  G  G  G+PG NG  GE G+  P         G +
Sbjct: 776 PGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLK 835

Query: 251 GKSGINGVPGTPAI 264
           G +G+ G+PGTP +
Sbjct: 836 GDAGLPGLPGTPGL 849



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 76/173 (43%), Gaps = 52/173 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----- 167
           GL G  G KG+ G        G +GEKG PG  G PGPQG  G  G  GP GD G     
Sbjct: 520 GLPGAPGTKGDRGGTCSACAPGTKGEKGLPGYSGQPGPQGDRGLPGMPGPVGDAGDDGLP 579

Query: 168 ----------------YPGPQGIPGDEG-------KRGPKGDMGYPGRIGLDGRDGLPGE 204
                           +PG   +PG +G       + GP      PG  GL G +G PG+
Sbjct: 580 GPAGRPGSPGPPGQDGFPG---LPGQKGEPTQLTLRPGP------PGYPGLKGENGFPGQ 630

Query: 205 PGLDGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           PG+DG+PG                 G  G+PG  G PG+DG+PG  G  GE G
Sbjct: 631 PGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPGLPGNKGEAG 683


>gi|324500440|gb|ADY40208.1| Collagen alpha-1(IV) chain, partial [Ascaris suum]
          Length = 1759

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 85/192 (44%), Positives = 99/192 (51%), Gaps = 44/192 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
            GL G  G +GE G  G MG+ G+ GE GAPG  G PG +GIPG  G+RG           
Sbjct: 1209 GLTGAPGLQGEPGLPGRMGLPGQPGELGAPGFPGAPGLEGIPGIRGERGDDGLPGLPGID 1268

Query: 162  ------PKGDMGYPGPQG---IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---LDG 209
                  P+GD GYPG  G   +PG  G+RG  G  G PG IG  G DGLPG PG   L G
Sbjct: 1269 GIPIQGPEGDAGYPGRDGNDGLPGLPGQRGDDGLPGLPGLIGERGDDGLPGYPGERGLRG 1328

Query: 210  IPGRNGMDG---IPGKDGL------------------PGKDGIPGTNGTNGEKGMTGPRG 248
            I G+ G DG   +PG  GL                  PGKDGIPG  G  GE G+ G  G
Sbjct: 1329 IDGKRGPDGARGLPGPPGLDGYPGAPGERGMDGLPGFPGKDGIPGYPGERGEVGLPGLPG 1388

Query: 249  NRGKSGINGVPG 260
             RG+ G+ G+PG
Sbjct: 1389 MRGEDGLPGLPG 1400



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/190 (40%), Positives = 92/190 (48%), Gaps = 47/190 (24%)

Query: 132 VKGERGEKGAPGVVGP---------------PGPQGIPGDEGKRGPKGDMGYPGPQGIPG 176
           VKGERGE+G PG+ GP               PGP G PG  G  G +GD G PG  G PG
Sbjct: 696 VKGERGEEGLPGLPGPRGPQGPMYSGLIKEIPGPDGFPGAPGLPGLRGDDGLPGLPGAPG 755

Query: 177 DEG---KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---------------- 217
            EG   ++G  G  G PG  GLDG  GLPG PG DG+PG +G+                 
Sbjct: 756 IEGIPGQKGEDGSDGLPGAPGLDGAPGLPGMPGDDGLPGADGLRGQPGDAGLPGLPGLPG 815

Query: 218 -------GIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPGTPAI 264
                  G+PG+ G P   G+DG+PG  G  G  G  GPRG    +G+ G +G PG P +
Sbjct: 816 LPGEPGIGMPGQAGFPGPQGEDGLPGLAGAEGFPGRQGPRGAPGVKGQPGESGYPGLPGL 875

Query: 265 CAYKRESCSL 274
              K E   L
Sbjct: 876 PGLKGEKGLL 885



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/190 (41%), Positives = 99/190 (52%), Gaps = 21/190 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMG---------VKGERGE---KGAPGVVGPPGPQGIPGDEGKR 160
            G+ GP GQ G+ G  GE G         +KGERG     G PG+ GPPG  G+ G +G R
Sbjct: 1104 GIPGPKGQTGDAGRNGERGFDGRPGIPGIKGERGADGLPGLPGLQGPPGFDGLQGQKGHR 1163

Query: 161  GPKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRN 214
            G  GD G+    G  G+PG +G+RG  G  GYPG    +G  G  GL G PGL G PG  
Sbjct: 1164 GIPGDAGFNGRAGLPGLPGIKGERGQDGQHGYPGEPGPVGAHGESGLTGAPGLQGEPGLP 1223

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            G  G+PG+   PG+ G PG  G  G +G+ G RG RG  G+ G+PG   I     E  + 
Sbjct: 1224 GRMGLPGQ---PGELGAPGFPGAPGLEGIPGIRGERGDDGLPGLPGIDGIPIQGPEGDAG 1280

Query: 275  LPNSETSQLL 284
             P  + +  L
Sbjct: 1281 YPGRDGNDGL 1290



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 98/195 (50%), Gaps = 27/195 (13%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG- 152
            I +    GF     E   PGL G  G  G  G +G  GVKG+ GE G PG+ G PG +G 
Sbjct: 822  IGMPGQAGFPGPQGEDGLPGLAGAEGFPGRQGPRGAPGVKGQPGESGYPGLPGLPGLKGE 881

Query: 153  -----IPGDEGKRGPKGDMGYPG------PQGIPGDEGKRGPKGDMGYPGRIGLD----- 196
                 I G +G+ G KG+ GY G        G+PG +G  GPKG+ G  G  GL+     
Sbjct: 882  KGLLGIDGKDGRVGKKGEPGYAGLPGQKGEAGVPGPDGLPGPKGETGKQGFPGLEGPPGL 941

Query: 197  -------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                   G DG  G PGL G+PG    DG+PG DG PG  G PG +G  GE G  G  G 
Sbjct: 942  PGIPGLRGEDGTIGFPGLRGMPGD---DGVPGIDGYPGSRGEPGLDGLPGEPGRQGEPGL 998

Query: 250  RGKSGINGVPGTPAI 264
             GK G+ G+PG P +
Sbjct: 999  PGKMGLAGLPGLPGM 1013



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 84/151 (55%), Gaps = 24/151 (15%)

Query: 113  GLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEG----------- 158
            GL G  G+ G +G KGE    G+ G++GE G PG  G PGP+G  G +G           
Sbjct: 883  GLLGIDGKDGRVGKKGEPGYAGLPGQKGEAGVPGPDGLPGPKGETGKQGFPGLEGPPGLP 942

Query: 159  ----KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---GIP 211
                 RG  G +G+PG +G+PGD+G     G  GYPG  G  G DGLPGEPG     G+P
Sbjct: 943  GIPGLRGEDGTIGFPGLRGMPGDDGV---PGIDGYPGSRGEPGLDGLPGEPGRQGEPGLP 999

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            G+ G+ G+PG  G+PG  G PG+ G  GE G
Sbjct: 1000 GKMGLAGLPGLPGMPGDSGAPGSKGLRGEPG 1030



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/152 (46%), Positives = 86/152 (56%), Gaps = 11/152 (7%)

Query: 131  GVKGERGEKGAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
            G+ G +G +GAPG    G PG +G PGD+G  GP G  GYPG  G+ G  G +G  GD G
Sbjct: 1057 GLPGMKGARGAPGRGFPGVPGLKGEPGDKGFDGPDGIDGYPGLPGMIGIPGPKGQTGDAG 1116

Query: 189  YPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKG 242
              G  G DGR G+P   GE G DG+PG  G+ G PG DGL G+    GIPG  G NG  G
Sbjct: 1117 RNGERGFDGRPGIPGIKGERGADGLPGLPGLQGPPGFDGLQGQKGHRGIPGDAGFNGRAG 1176

Query: 243  MTG-P--RGNRGKSGINGVPGTPAICAYKRES 271
            + G P  +G RG+ G +G PG P       ES
Sbjct: 1177 LPGLPGIKGERGQDGQHGYPGEPGPVGAHGES 1208



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 81/142 (57%), Gaps = 3/142 (2%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G KGE G KG  G  G  G  G PG++G PGP+G  GD G+ G +G  G P   GIPG +
Sbjct: 1077 GLKGEPGDKGFDGPDGIDGYPGLPGMIGIPGPKGQTGDAGRNGERGFDGRP---GIPGIK 1133

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G+RG  G  G PG  G  G DGL G+ G  GIPG  G +G  G  GLPG  G  G +G +
Sbjct: 1134 GERGADGLPGLPGLQGPPGFDGLQGQKGHRGIPGDAGFNGRAGLPGLPGIKGERGQDGQH 1193

Query: 239  GEKGMTGPRGNRGKSGINGVPG 260
            G  G  GP G  G+SG+ G PG
Sbjct: 1194 GYPGEPGPVGAHGESGLTGAPG 1215



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 95/198 (47%), Gaps = 18/198 (9%)

Query: 37   RRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPL 96
            R  +    G++     P  P +E +P      IR           ++    L     IP+
Sbjct: 1225 RMGLPGQPGELGAPGFPGAPGLEGIP-----GIR-------GERGDDGLPGLPGIDGIPI 1272

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
               +G           GL G  GQ+G+ G  G  G+ GERG+ G PG    PG +G+ G 
Sbjct: 1273 QGPEGDAGYPGRDGNDGLPGLPGQRGDDGLPGLPGLIGERGDDGLPGY---PGERGLRGI 1329

Query: 157  EGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            +GKRGP G  G PGP G+   PG  G+RG  G  G+PG+ G+ G  G  GE GL G+PG 
Sbjct: 1330 DGKRGPDGARGLPGPPGLDGYPGAPGERGMDGLPGFPGKDGIPGYPGERGEVGLPGLPGM 1389

Query: 214  NGMDGIPGKDGLPGKDGI 231
             G DG+PG  GL G+ G 
Sbjct: 1390 RGEDGLPGLPGLAGQKGA 1407



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 95/207 (45%), Gaps = 47/207 (22%)

Query: 112 PGLQGPIGQKGEI------------GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           PGL GP G +G +            G  G  G+ G RG+ G PG+ G PG +GIPG +G+
Sbjct: 706 PGLPGPRGPQGPMYSGLIKEIPGPDGFPGAPGLPGLRGDDGLPGLPGAPGIEGIPGQKGE 765

Query: 160 RG------------PKGDMGYPGPQGIPGDEGKRGPKGD-----------------MGYP 190
            G              G  G PG  G+PG +G RG  GD                 +G P
Sbjct: 766 DGSDGLPGAPGLDGAPGLPGMPGDDGLPGADGLRGQPGDAGLPGLPGLPGLPGEPGIGMP 825

Query: 191 GRIGL---DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG---IPGTNGTNGEKGMT 244
           G+ G     G DGLPG  G +G PGR G  G PG  G PG+ G   +PG  G  GEKG+ 
Sbjct: 826 GQAGFPGPQGEDGLPGLAGAEGFPGRQGPRGAPGVKGQPGESGYPGLPGLPGLKGEKGLL 885

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRES 271
           G  G  G+ G  G PG   +   K E+
Sbjct: 886 GIDGKDGRVGKKGEPGYAGLPGQKGEA 912



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 92/188 (48%), Gaps = 47/188 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  GQKGE G+ G   + G  G  GAPG+ G PG  G+PG +G RG  GD      
Sbjct: 754 PGIEGIPGQKGEDGSDG---LPGAPGLDGAPGLPGMPGDDGLPGADGLRGQPGDAGLPGL 810

Query: 167 ------------------GYPGPQG---IPGDEG------KRGPKGDMGYPGRIGLDGRD 199
                             G+PGPQG   +PG  G      ++GP+G  G  G+ G  G  
Sbjct: 811 PGLPGLPGEPGIGMPGQAGFPGPQGEDGLPGLAGAEGFPGRQGPRGAPGVKGQPGESGYP 870

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNR 250
           GLPG PGL    G  G+ GI GKDG  GK G PG  G  G+K         G+ GP+G  
Sbjct: 871 GLPGLPGLK---GEKGLLGIDGKDGRVGKKGEPGYAGLPGQKGEAGVPGPDGLPGPKGET 927

Query: 251 GKSGINGV 258
           GK G  G+
Sbjct: 928 GKQGFPGL 935



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 93/210 (44%), Gaps = 59/210 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-PGPQGIPGDEGKR---------- 160
           PGL GP G +G +G  G  G  G +GE G   ++GP   PQG PG +G+R          
Sbjct: 579 PGLPGPSGIQGSVGLPGLPGFPGLKGEAGD--IIGPMENPQGYPGTKGERGPPGGVGLPG 636

Query: 161 --------GPKGDMGYPGP---QGIPGDEGKRGP-------------------------- 183
                   GP+G  G PGP   +G+PG +GKRG                           
Sbjct: 637 LPGPDGADGPRGPSGQPGPRGEKGLPGIDGKRGRDGMVGRPGLPGPPGDSFPGPPGPPGV 696

Query: 184 KGDMGYPGRIGLDGRDGLPGE---------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           KG+ G  G  GL G  G  G          PG DG PG  G+ G+ G DGLPG  G PG 
Sbjct: 697 KGERGEEGLPGLPGPRGPQGPMYSGLIKEIPGPDGFPGAPGLPGLRGDDGLPGLPGAPGI 756

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+KG  G  G  G  G++G PG P +
Sbjct: 757 EGIPGQKGEDGSDGLPGAPGLDGAPGLPGM 786



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 62/127 (48%), Gaps = 28/127 (22%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G RG +GD G PG +G+      RG +G  G PG +GL G DGLPG  G  GIPG N
Sbjct: 71  GAPGLRGSEGDFGDPGVKGV------RGERGFPGAPGNVGLPGLDGLPGMKGEMGIPGCN 124

Query: 215 GMDGI---------------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G DG+                     PGK G PG  GI  + G  GE G  G  G  G  
Sbjct: 125 GTDGLPGIPGLAGPPGPHGPPGAAGQPGKQGPPGDGGI-NSVGRKGEAGEPGRAGAPGTR 183

Query: 254 GINGVPG 260
           G++G+PG
Sbjct: 184 GLDGIPG 190



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 95/253 (37%), Gaps = 92/253 (36%)

Query: 113 GLQGPIGQKGEIGAKGEMGV--------------------------KGERGEKGAPGVVG 146
           G+ G  G KG  G  G MG                           KG+RG+ G PG   
Sbjct: 374 GIDGAPGPKGTAGRPGGMGPVGPRGHVGAPGPPGPPGPEGLPGYSEKGDRGKDGNPGYA- 432

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPG--------------DEGKRGPKGDMGYPGR 192
                   G+ G  GP G+ G PG QG+PG               +G  G  GD+G PG 
Sbjct: 433 --------GEAGPTGPLGECGKPGEQGLPGFDIQGPPGPEGRPGRDGYPGVPGDVGDPGM 484

Query: 193 IGLDG-------RDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGK---------DGIPG 233
            GL G       + G PG+ GL G PG N   G+DG PG  GLPG+         DG+PG
Sbjct: 485 AGLKGFPGTGVKKVGPPGQIGLIGPPGENGRIGLDGRPGSPGLPGQKGDDCGYCPDGLPG 544

Query: 234 TN---------------------GTNGEKGMTGPRGNRGKSGIN---GVPGTPAICAYKR 269
                                  G  G KG  G  G  G SGI    G+PG P     K 
Sbjct: 545 QKGEAGAPGPDGYPGPPGPNGNMGERGAKGAAGKPGLPGPSGIQGSVGLPGLPGFPGLKG 604

Query: 270 ESCSLLPNSETSQ 282
           E+  ++   E  Q
Sbjct: 605 EAGDIIGPMENPQ 617



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 61/144 (42%), Gaps = 37/144 (25%)

Query: 144 VVGPPGPQGIPGDEGKR------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           + GP GP G+ G++G+             GP G +G  G +G PGD G RG +G  G  G
Sbjct: 254 IQGPAGPPGLKGEKGRDGPVGPPGAPGLDGPPGYVGLKGQKGDPGDAGARGKRGKDGMMG 313

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMD-------------------------GIPGKDGLP 226
             G  G  G  G PGLDG PG+ G                           G PG  G+ 
Sbjct: 314 LSGAKGETGARGVPGLDGYPGQKGAAGELGYSGRPGPEGDPGPPGEFGIGRGQPGPRGVQ 373

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNR 250
           G DG PG  GT G  G  GP G R
Sbjct: 374 GIDGAPGPKGTAGRPGGMGPVGPR 397


>gi|17568913|ref|NP_510663.1| Protein LET-2, isoform b [Caenorhabditis elegans]
 gi|351061153|emb|CCD68907.1| Protein LET-2, isoform b [Caenorhabditis elegans]
          Length = 1759

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 91/168 (54%), Gaps = 25/168 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G KG++G  G  G+ G++GE G  GV G PG  G PG       KGD G PG 
Sbjct: 791 PGLPGIPGPKGDVGNPGLPGLNGQKGEPGV-GVPGQPGSPGFPGL------KGDAGLPGL 843

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------EPGLDGIPGRNGMDGI 219
            G PG EG+RG      +PG  GL G DGLPG            + GL G+PGR G  G 
Sbjct: 844 PGTPGLEGQRG------FPGAPGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGF 897

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           PG+DGLPG  G+ G +G  G  G+TG +G+ G  G +G PG P    Y
Sbjct: 898 PGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAPGY 945



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 90/185 (48%), Gaps = 32/185 (17%)

Query: 119  GQKGEIGAK---------------GEMGVKGERGEKGAPGVVGPPGP---------QGIP 154
            G  G  G K               G  G+KG+RG  G PG  G  GP          G+P
Sbjct: 983  GMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGEAGPAARDGQKGDAGLP 1042

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDE-----GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            G  G RGP+G  G PG  G  G+      G+ G  G+ G PG  G  GR G PG PG DG
Sbjct: 1043 GQPGLRGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDG 1102

Query: 210  IPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            +PG  GM    G PG+DGLPG+DG+PG  G  G+ G +G  G  G  G++G PG P I  
Sbjct: 1103 LPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRG 1162

Query: 267  YKRES 271
             K + 
Sbjct: 1163 DKGQG 1167



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL G  GQKGE G    +GV G+ G  G PG+    G PG  G PG EG+RG  G  G 
Sbjct: 806 PGLPGLNGQKGEPG----VGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGL 861

Query: 169 PGPQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-- 223
            G  G+PG  G+ G    KGD G PG  G +G  G PG+ GL G+PG  G DG+PG    
Sbjct: 862 KGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGV 921

Query: 224 -GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL G  G PG +G  G  G  G  G +G +GI GVPG
Sbjct: 922 TGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPG 959



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 95/184 (51%), Gaps = 32/184 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG-----ERGEKGAPGVVGPPGPQGIPGDEGKRG----P- 162
            G QGP G  G  G KGE G+ G     + GEKG PG+ G  G QG PG  G+ G    P 
Sbjct: 1049 GPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDGLPGFPG 1108

Query: 163  -KGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             KG+ GYPG  G+PG +   G  G KGD+G  G+ GL G  GL G+PG+ GI G  G  G
Sbjct: 1109 MKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGG 1168

Query: 219  IPGKDGLPGKDGIPGTNGTNG------------EKGMTGP------RGNRGKSGINGVPG 260
            +PG  G  G DG PG  G NG            EKG  G       +G+ G  G +G+PG
Sbjct: 1169 LPGIPGDRGMDGYPGQKGENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPG 1228

Query: 261  TPAI 264
             P +
Sbjct: 1229 IPGL 1232



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 94/196 (47%), Gaps = 22/196 (11%)

Query: 82  NNPWV-WLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG 140
            NP +  LN     P V + G   S      PG  G  G  G  G  G  G++G+RG  G
Sbjct: 804 GNPGLPGLNGQKGEPGVGVPGQPGS------PGFPGLKGDAGLPGLPGTPGLEGQRGFPG 857

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           APG+ G  G  G+ G  G  G KGD G PG   +PG EG  G  G  G PG  G+ G DG
Sbjct: 858 APGLKGGDGLPGLSGQPGYPGEKGDAGLPG---VPGREGSPGFPGQDGLPGVPGMKGEDG 914

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG------------PRG 248
           LPG PG+ G+ G  G  G  G  GLPG  G PG  G  G  G+ G              G
Sbjct: 915 LPGLPGVTGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNG 974

Query: 249 NRGKSGINGVPGTPAI 264
            +G+ G+ G+PGTP +
Sbjct: 975 PKGEPGVPGMPGTPGM 990



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 65/117 (55%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G+PG +G+ G  G  G PG +G  G  G  G KGD+G  G  G  G DGLPG PG DG P
Sbjct: 1290 GLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQP 1349

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G+ G  G  GLPG+ G PG  G  GE G+ G  G +G++G  G PG P     K
Sbjct: 1350 GIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEK 1406



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 80/175 (45%), Gaps = 29/175 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG------------------------IPGDEGKR 160
           G KGE G  G  GE G PG  G PG +G                        +PG  G  
Sbjct: 738 GTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIP 797

Query: 161 GPKGDMGYPGPQGIPGDEGKRG-----PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           GPKGD+G PG  G+ G +G+ G       G  G+PG  G  G  GLPG PGL+G  G  G
Sbjct: 798 GPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPG 857

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G+ G DGLPG  G PG  G  G+ G+ G  G  G  G  G  G P +   K E
Sbjct: 858 APGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGE 912



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 85/162 (52%), Gaps = 19/162 (11%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------KRGPKGDMGYP 169
           G+ G  G  G KGE G  G PG VG PG  G+PG +G              G  GD G+ 
Sbjct: 729 GQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGF- 787

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
              G+PG  G  GPKGD+G PG  GL+G+    GEPG+ G+PG+ G  G PG  G  G  
Sbjct: 788 --GGVPGLPGIPGPKGDVGNPGLPGLNGQK---GEPGV-GVPGQPGSPGFPGLKGDAGLP 841

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G+PGT G  G++G  G  G +G  G+ G+ G P     K ++
Sbjct: 842 GLPGTPGLEGQRGFPGAPGLKGGDGLPGLSGQPGYPGEKGDA 883



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 77/149 (51%), Gaps = 15/149 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G+ G  G  G+  + G  G+ G PG+ G PG +G  G  G RGP GD      
Sbjct: 440 PGLPGPKGEPGYRGTPGQS-IPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDS----L 494

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-----MDGIPGKDGLP 226
            G+PG  G+RG  G  GY GR   DG +GLPG PG  G   R G       G  G+ GLP
Sbjct: 495 NGLPGAPGQRGAPGPNGYDGR---DGVNGLPGAPGTKGD--RGGTCSACAPGTKGEKGLP 549

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G  G PG  G  G  GM GP G+ G  G+
Sbjct: 550 GYSGQPGPQGDRGLPGMPGPVGDAGDDGL 578



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 99/235 (42%), Gaps = 80/235 (34%)

Query: 113  GLQGPIGQKGEIGAKGE---------------MGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            GL G  GQKG++G  G+                G++G++G+ G PG+ G  G  G PG +
Sbjct: 1126 GLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGGLPGIPGDRGMDGYPGQK 1185

Query: 158  GKRG-------------------P-----KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            G+ G                   P     KG  GYPG  G+PG  G    KGD G+PG+ 
Sbjct: 1186 GENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPGIPGL---KGDSGFPGQP 1242

Query: 194  GLDGRDGLPGE-----------------------------------PGLDGIPGRNGMDG 218
            G +G  GL GE                                   PGL G  G +G+ G
Sbjct: 1243 GQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSG 1302

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP---GTPAICAYKRE 270
            +PG  GL G+ G+PG  G  G+ G  G  G RG+ G+ GVP   G P I   K E
Sbjct: 1303 LPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGE 1357



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 90/193 (46%), Gaps = 59/193 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL+G  G  G  GAKG++   G+ G+RGE G PGV G  G  GIPG +G+ G  G  G 
Sbjct: 1307 PGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPGQ 1366

Query: 169  PGPQGIPGDEGKR------GPKGDMGYPGRIGLDG---------------RDGL------ 201
            PG  GIPG +G+       G KG+ G+PG  G+ G               RDGL      
Sbjct: 1367 PGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGLPGLPGRDGLPGADGP 1426

Query: 202  --------------PGE---PGLDGIPGRNGMDGIPGKDGLP------------GKDGIP 232
                          PGE   PGL G PG  G  G+PG DG P            G DG P
Sbjct: 1427 VGPPGPSGPQNLVEPGEKGLPGLPGAPGLRGEKGMPGLDGPPGNDGPPGLPGQRGNDGYP 1486

Query: 233  GTNGTNGEKGMTG 245
            G  G +GEKGM G
Sbjct: 1487 GAPGLSGEKGMGG 1499



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 67/131 (51%), Gaps = 15/131 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G+ G  G  G  G+KGE G  G PG  G  G  GIPG       +G+ G PG 
Sbjct: 1289 PGLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGK------RGEDGLPG- 1341

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
              +PG +G+ G       PG  G  G  GLPG+PG  GIPG  G  G+PG  G  G+ G 
Sbjct: 1342 --VPGRDGQPG------IPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGF 1393

Query: 232  PGTNGTNGEKG 242
            PGT G  G  G
Sbjct: 1394 PGTPGVPGYAG 1404



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 70/147 (47%), Gaps = 18/147 (12%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GV G  G  G PG  G PG +G PG           G PG  G PG +G  G KG+ 
Sbjct: 429 GAPGVSGPSGIPGLPGPKGEPGYRGTPGQS-------IPGLPGKDGKPGLDGAPGRKGEN 481

Query: 188 GYPGRIGLDGR--DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG---------TNG 236
           G PG  G  G   +GLPG PG  G PG NG DG  G +GLPG  G  G           G
Sbjct: 482 GLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGRDGVNGLPGAPGTKGDRGGTCSACAPG 541

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           T GEKG+ G  G  G  G  G+PG P 
Sbjct: 542 TKGEKGLPGYSGQPGPQGDRGLPGMPG 568



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 85/186 (45%), Gaps = 39/186 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL G  G  GE G  G  GV G  G      + G PGV G  G  G+PG  G  G KGD
Sbjct: 868  PGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGD 927

Query: 166  MGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGR------------DGLPGEPGLDGI 210
            +G PG     G+PG  G  G KG+ G PG  G  G              G PG PG+ G 
Sbjct: 928  LGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNGPKGEPGVPGMPGT 987

Query: 211  PG------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            PG            R+G+ G+PG  G  G +G+P      GEKG  GP    G+ G  G+
Sbjct: 988  PGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLP------GEKGEAGPAARDGQKGDAGL 1041

Query: 259  PGTPAI 264
            PG P +
Sbjct: 1042 PGQPGL 1047



 Score = 46.2 bits (108), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 84/169 (49%), Gaps = 30/169 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGE G  G  GV G +G+ GAPG  G PG   +PG  G  G KG+ G PG  
Sbjct: 902  GLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPG---LPGAPGYPGMKGNAGIPG-- 956

Query: 173  GIPG---------DEGKRGPKGDMGYPGRIGLDG------------RDGLPGEPGLDGIP 211
             +PG           G  GPKG+ G PG  G  G            RDGL G PG+ G  
Sbjct: 957  -VPGFKGDGGLPGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDR 1015

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G NG+ G  G+ G   +DG  G  G  G+ G+   RG +G SG+ GVPG
Sbjct: 1016 GFNGLPGEKGEAGPAARDGQKGDAGLPGQPGL---RGPQGPSGLPGVPG 1061



 Score = 45.8 bits (107), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 84/194 (43%), Gaps = 46/194 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGK 159
           PGL G  GQ G  G  G  G  G  G+ G PG  G             PG QG+PG+   
Sbjct: 661 PGLSGKPGQDGLPGLPGNKGEAG-YGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAP 719

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------- 209
                +   P P G PG  G  G KG+ GYPGR G  G+ G PG PG+ G          
Sbjct: 720 E----NQVNPAPPGQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGL 775

Query: 210 -----------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR--------GNR 250
                        G  G+ GIPG  G  G  G+PG NG  GE G+  P         G +
Sbjct: 776 PGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLK 835

Query: 251 GKSGINGVPGTPAI 264
           G +G+ G+PGTP +
Sbjct: 836 GDAGLPGLPGTPGL 849



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 76/173 (43%), Gaps = 52/173 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----- 167
           GL G  G KG+ G        G +GEKG PG  G PGPQG  G  G  GP GD G     
Sbjct: 520 GLPGAPGTKGDRGGTCSACAPGTKGEKGLPGYSGQPGPQGDRGLPGMPGPVGDAGDDGLP 579

Query: 168 ----------------YPGPQGIPGDEG-------KRGPKGDMGYPGRIGLDGRDGLPGE 204
                           +PG   +PG +G       + GP      PG  GL G +G PG+
Sbjct: 580 GPAGRPGSPGPPGQDGFPG---LPGQKGEPTQLTLRPGP------PGYPGLKGENGFPGQ 630

Query: 205 PGLDGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           PG+DG+PG                 G  G+PG  G PG+DG+PG  G  GE G
Sbjct: 631 PGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPGLPGNKGEAG 683


>gi|350416745|ref|XP_003491082.1| PREDICTED: collagen alpha-1(XXIV) chain-like isoform 1 [Bombus
           impatiens]
          Length = 894

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 94/194 (48%), Gaps = 48/194 (24%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDMGYPGPQG 173
           QKG  G +GE G +G++GEKG PG  G PG  G PG EG+ G      PKG++G+PG   
Sbjct: 398 QKGAKGEQGERGDEGKQGEKGEPGERGSPGQDGSPGSEGRSGLPGFPGPKGEIGFPG--- 454

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------------------NG 215
           +PG +G +G +G+ G  G  G+ G+ G  GEPG DG+PG                    G
Sbjct: 455 VPGPQGLQGLRGEAGAQGSPGIQGQKGEAGEPGRDGLPGSMVGSILPGPPGPEGPPGSPG 514

Query: 216 MDGIP------------------GKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSG 254
            DG+P                  GKDG PG  G PG  G+    GE G  GPRG  G  G
Sbjct: 515 EDGLPGVKGEPGPVGPPGLPGLQGKDGAPGSLGPPGLQGSPGLPGEPGAPGPRGIEGAIG 574

Query: 255 INGVPGTPAICAYK 268
             G+PG     A K
Sbjct: 575 KPGLPGLDGRSAEK 588



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 77/162 (47%), Gaps = 31/162 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G  G  G  GE G  GERG +G  G+ G PG  G PG +G  G +G  G PG 
Sbjct: 661 PGVSGPRGASGAPGLPGERGPPGERGPEGQMGLPGMPGKDGAPGLQGPPGIRGQTGMPGV 720

Query: 172 QGIPG-----------------------DEGKRGPKG-----DMGYPGRIGLDGRDGLPG 203
           QG PG                        EG RGP G       G PGRIG     G+PG
Sbjct: 721 QGPPGRSIIESEIREICTSVLRERLKTLTEGLRGPPGLPGLARQGRPGRIGT---QGIPG 777

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           +PGL G+PG  G  G+PG  G  G  G PG  G  G+KG  G
Sbjct: 778 DPGLPGLPGERGFVGLPGPQGAIGLQGSPGERGEKGDKGQEG 819



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 91/209 (43%), Gaps = 40/209 (19%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
           +QG   +     PPGLQG  G  GE GA G  G++G  G+ G PG+ G    +G  G +G
Sbjct: 536 LQGKDGAPGSLGPPGLQGSPGLPGEPGAPGPRGIEGAIGKPGLPGLDGRSAEKGDRGQQG 595

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKG------------------------DM------- 187
           ++GP G  G PG  G PG  G  G  G                        DM       
Sbjct: 596 EQGPVGPRGLPGSVGAPGLPGVAGIPGLEGRPGPPGAPGPPGPAGPPGTISDMLSTNNVL 655

Query: 188 ---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
              G PG  G  G  G PG PG  G PG  G +G  G  G+PGKDG PG  G  G +G T
Sbjct: 656 ETIGSPGVSGPRGASGAPGLPGERGPPGERGPEGQMGLPGMPGKDGAPGLQGPPGIRGQT 715

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRESCS 273
                 G  G+ G PG   I +  RE C+
Sbjct: 716 ------GMPGVQGPPGRSIIESEIREICT 738



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 75/165 (45%), Gaps = 37/165 (22%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GV G RG  GAPG+   PG +G PG+ G  G  G  G PG  G PG +G  G +G  
Sbjct: 659 GSPGVSGPRGASGAPGL---PGERGPPGERGPEGQMGLPGMPGKDGAPGLQGPPGIRGQT 715

Query: 188 GYPGRIGLDGR-----------------------DGLPGEPGLDGI-----PGRNGMDGI 219
           G PG  G  GR                       +GL G PGL G+     PGR G  GI
Sbjct: 716 GMPGVQGPPGRSIIESEIREICTSVLRERLKTLTEGLRGPPGLPGLARQGRPGRIGTQGI 775

Query: 220 PGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           PG  GLPG        G+PG  G  G +G  G RG +G  G  GV
Sbjct: 776 PGDPGLPGLPGERGFVGLPGPQGAIGLQGSPGERGEKGDKGQEGV 820



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 102/222 (45%), Gaps = 62/222 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL+G  G++G++G +G     G RG  G PG  G  GP G+PG +G+ G +GDMG+PG 
Sbjct: 298 PGLRGSPGEQGKVGPQG---FTGARGFPGNPGPKGSIGPIGLPGAKGENGERGDMGFPGL 354

Query: 172 QG--------------------------IP---------------GDEGKRGPKGDMGYP 190
           +G                          IP               G +G++G +GD    
Sbjct: 355 KGDQGLPGPQGYPGPPGPPGKISDYRDAIPKFVGPPGSPGYPGQKGAKGEQGERGD---- 410

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                +G+ G  GEPG  G PG+   DG PG +G  G  G PG  G  G  G+ GP+G +
Sbjct: 411 -----EGKQGEKGEPGERGSPGQ---DGSPGSEGRSGLPGFPGPKGEIGFPGVPGPQGLQ 462

Query: 251 GKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGS 292
           G  G  G  G+P I   K E+       E  +  +P ++VGS
Sbjct: 463 GLRGEAGAQGSPGIQGQKGEA------GEPGRDGLPGSMVGS 498



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 100/259 (38%), Gaps = 95/259 (36%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------- 146
           V  QGF  +      PG +G IG  G  GAKGE    GERG+ G PG+ G          
Sbjct: 310 VGPQGFTGARGFPGNPGPKGSIGPIGLPGAKGE---NGERGDMGFPGLKGDQGLPGPQGY 366

Query: 147 ----------------------------------PPGPQGIPGDEGKRGPK---GDMGYP 169
                                               G QG  GDEGK+G K   G+ G P
Sbjct: 367 PGPPGPPGKISDYRDAIPKFVGPPGSPGYPGQKGAKGEQGERGDEGKQGEKGEPGERGSP 426

Query: 170 GPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIP 220
           G  G PG EG+       GPKG++G+PG  G  G  GL GE G  G P   G+ G  G P
Sbjct: 427 GQDGSPGSEGRSGLPGFPGPKGEIGFPGVPGPQGLQGLRGEAGAQGSPGIQGQKGEAGEP 486

Query: 221 GKDGLPGK---------------------DGIPGT---------------NGTNGEKGMT 244
           G+DGLPG                      DG+PG                 G +G  G  
Sbjct: 487 GRDGLPGSMVGSILPGPPGPEGPPGSPGEDGLPGVKGEPGPVGPPGLPGLQGKDGAPGSL 546

Query: 245 GPRGNRGKSGINGVPGTPA 263
           GP G +G  G+ G PG P 
Sbjct: 547 GPPGLQGSPGLPGEPGAPG 565



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 36/193 (18%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--- 151
            + GF     E   PG+ GP G    +GE GA+G  G++G++GE G PG  G PG     
Sbjct: 439 GLPGFPGPKGEIGFPGVPGPQGLQGLRGEAGAQGSPGIQGQKGEAGEPGRDGLPGSMVGS 498

Query: 152 ------------------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
                             G+PG +G+ GP G  G PG QG  G  G  GP G  G PG  
Sbjct: 499 ILPGPPGPEGPPGSPGEDGLPGVKGEPGPVGPPGLPGLQGKDGAPGSLGPPGLQGSPG-- 556

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                  LPGEP   G PG  G++G  GK GLPG DG     G  G++G  GP G RG  
Sbjct: 557 -------LPGEP---GAPGPRGIEGAIGKPGLPGLDGRSAEKGDRGQQGEQGPVGPRGLP 606

Query: 254 GINGVPGTPAICA 266
           G  G PG P +  
Sbjct: 607 GSVGAPGLPGVAG 619



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 86/209 (41%), Gaps = 61/209 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------ 159
           PGL G   +KG+ G +GE G  G RG  G+ G  G PG  GIPG EG+            
Sbjct: 579 PGLDGRSAEKGDRGQQGEQGPVGPRGLPGSVGAPGLPGVAGIPGLEGRPGPPGAPGPPGP 638

Query: 160 -------------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
                                     GP+G  G PG  G  G  G+RGP+G MG PG  G
Sbjct: 639 AGPPGTISDMLSTNNVLETIGSPGVSGPRGASGAPGLPGERGPPGERGPEGQMGLPGMPG 698

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGK-----------------------DGLPGKDGI 231
            DG  GL G PG+ G  G  G+ G PG+                       +GL G  G+
Sbjct: 699 KDGAPGLQGPPGIRGQTGMPGVQGPPGRSIIESEIREICTSVLRERLKTLTEGLRGPPGL 758

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG     G  G  G +G  G  G+ G+PG
Sbjct: 759 PGLA-RQGRPGRIGTQGIPGDPGLPGLPG 786


>gi|201860274|ref|NP_001128481.1| collagen alpha-1(IV) chain precursor [Rattus norvegicus]
          Length = 1669

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 104/202 (51%), Gaps = 34/202 (16%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQG-- 152
            V   G   S  E   PG+    G +G  G+ GE G KGE+G+ G PG+   G PG +G  
Sbjct: 1013 VGGMGLPGSPGEKGVPGI---PGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQ 1069

Query: 153  ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                 PG  G++G KG  G PG   +PG  G RG  G++G+PG  GL G  G  G PGLD
Sbjct: 1070 GLAGFPGSPGEKGEKGSAGTPG---MPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLD 1126

Query: 209  GIPGRNGMDGIPG---------KDGLPGKDGIPGTNGTNGEKGMT-----------GPRG 248
            G+PG  G  G+PG         + G PG DGIPG+ G  GE+G+            G +G
Sbjct: 1127 GVPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEQGLPGRGFPGFPGTKGDKG 1186

Query: 249  NRGKSGINGVPGTPAICAYKRE 270
            ++G+ G  G+ G+P I   K E
Sbjct: 1187 SKGEVGFPGLAGSPGIPGAKGE 1208



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/157 (45%), Positives = 88/157 (56%), Gaps = 19/157 (12%)

Query: 119  GQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GQKG+ G KG++G    KG RG+ G PGV   PG  G  G  G+ GPKGD   PG  GIP
Sbjct: 948  GQKGDQGEKGQIGPTGDKGSRGDPGTPGV---PGKDGQAGHPGQPGPKGD---PGLSGIP 1001

Query: 176  GDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  G  GPKG    MG PG  G  G  G+PG  G+ G PG  G  G  G+ GLPG  GIP
Sbjct: 1002 GSPGLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGI-GIP 1060

Query: 233  GTNGTNGEKGMT------GPRGNRGKSGINGVPGTPA 263
            G  G  G++G+       G +G +G +G  G+PG+P 
Sbjct: 1061 GRPGDKGDQGLAGFPGSPGEKGEKGSAGTPGMPGSPG 1097



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 86/171 (50%), Gaps = 26/171 (15%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GP G KG  G  G  GV G+ G+ G PG  GP   PG  GIPG  G  GPKG +      
Sbjct: 960  GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGIPGSPGLPGPKGSVGGMGLP 1019

Query: 167  ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
                     G PG QG+PG  G++G KG+        +G PGR G  G  GL G PG  G
Sbjct: 1020 GSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPG 1079

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G PG  G PG  G PG  G  G  G+ G +G++G  G++GVPG
Sbjct: 1080 EKGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLDGVPG 1130



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 95/195 (48%), Gaps = 45/195 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG  G  G  G+KGEMGV G  G+ G+PG  G PG   +PG+      KGD G+PG 
Sbjct: 863  PGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGAPG---LPGE------KGDHGFPGS 913

Query: 172  QGIPGDEGKRGPKGDMGYPG------------------------RIGLDGRDGLPGEPGL 207
             G  GD G +G KGD+G PG                        +IG  G  G  G+PG 
Sbjct: 914  SGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDPGT 973

Query: 208  DGIPGRNGMDGIPGK---------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI--- 255
             G+PG++G  G PG+          G+PG  G+PG  G+ G  G+ G  G +G  GI   
Sbjct: 974  PGVPGKDGQAGHPGQPGPKGDPGLSGIPGSPGLPGPKGSVGGMGLPGSPGEKGVPGIPGS 1033

Query: 256  NGVPGTPAICAYKRE 270
             GVPG+P     K E
Sbjct: 1034 QGVPGSPGEKGAKGE 1048



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 16/137 (11%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD--MGYPGRIGLDGRDGL 201
           + GPPG  G+PG  G  GP+GD G+PG  G PG+ G++G  G   +G+PG  G  G DGL
Sbjct: 644 LPGPPGAAGLPGSPGFPGPQGDRGFPGTPGRPGNPGEKGAVGQPGIGFPGLPGPKGVDGL 703

Query: 202 PGEPGLDGIPGRNGMDGIPGK--------------DGLPGKDGIPGTNGTNGEKGMTGPR 247
           PGE G  G PGR G +G+PG                GL G+ G+PG  GT GEKG  G  
Sbjct: 704 PGEIGRPGSPGRPGFNGLPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGP 763

Query: 248 GNRGKSGINGVPGTPAI 264
           G  G+ G+ G PG   I
Sbjct: 764 GVPGEQGLTGPPGLQGI 780



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 84/175 (48%), Gaps = 23/175 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------- 155
            PG  GP G  G  G KG+ G  G  G +G PG  G  G  G+PG                
Sbjct: 890  PGSPGPAGAPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQ 949

Query: 156  --DEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
              D+G++G   P GD G  G  G PG  GK G  G  G PG  G  G  G+PG PGL G 
Sbjct: 950  KGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGIPGSPGLPGP 1009

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN--GVPGTPA 263
             G  G  G+PG  G  G  GIPG+ G  G  G  G +G +G+SG+   G+PG P 
Sbjct: 1010 KGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPG 1064



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 90/188 (47%), Gaps = 45/188 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG  GP GQKGE G+ G  G  GE+GE+G PG   P    G PG +G +G KG++G+PG 
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSAGEKGEQGLPGRGFP----GFPGTKGDKGSKGEVGFPGL 1196

Query: 171  --PQGIPGDEGKRG-----------------------PKGDMG---------------YP 190
                GIPG +G++G                       PKGD G                P
Sbjct: 1197 AGSPGIPGAKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPP 1256

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G+DG  G  G PG  G PG  G  G PG  G+PG  G PG  G+ G+ G  G  G +
Sbjct: 1257 GFPGIDGPKGDKGNPGWPGAPGAPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQ 1316

Query: 251  GKSGINGV 258
            G+ G+ G+
Sbjct: 1317 GQKGLPGL 1324



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 71/148 (47%), Gaps = 24/148 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G KG++G +G PG+ G  G  G+PG +G          PG  G PG +G+ G  G  G P
Sbjct: 840 GPKGDKGSQGLPGLTGQSGLPGLPGQQG---------TPGVPGFPGSKGEMGVMGTPGQP 890

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT------------- 237
           G  G  G  GLPGE G  G PG +G  G PG  G  G  G+PG  G+             
Sbjct: 891 GSPGPAGAPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQK 950

Query: 238 --NGEKGMTGPRGNRGKSGINGVPGTPA 263
              GEKG  GP G++G  G  G PG P 
Sbjct: 951 GDQGEKGQIGPTGDKGSRGDPGTPGVPG 978



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 82/195 (42%), Gaps = 50/195 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G  G KGE G+       G PG+ G PG  GIPG  G++G  G  G PG 
Sbjct: 716 PGFNGLPGNPGPQGQKGEPGI-------GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGE 768

Query: 172 QGIPGDEGKRGPKGDMGYPG--------------------------------RIGLDGRD 199
           QG+ G  G +G +GD G PG                                  G+ G  
Sbjct: 769 QGLTGPPGLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEK 828

Query: 200 GLPGEPGLD-----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           G PG PGLD           G+PG  G  G+PG  G  G  G+PG  G+ GE G+ G  G
Sbjct: 829 GFPGFPGLDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPG 888

Query: 249 NRGKSGINGVPGTPA 263
             G  G  G PG P 
Sbjct: 889 QPGSPGPAGAPGLPG 903



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 86/207 (41%), Gaps = 65/207 (31%)

Query: 112 PGLQGPIGQKGEIG-----AKGEMGVKG------ERGEKGAPGV------VGPPGPQGIP 154
           PG  GP GQKGE G      KG+ G+ G      E+G  G PGV       GPPG QGI 
Sbjct: 722 PGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGIR 781

Query: 155 GDEGKRG-----------------------------------PKGDMGYPGPQGIPGDEG 179
           GD G  G                                    KG+ G+P   G PG + 
Sbjct: 782 GDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFP---GFPGLD- 837

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------GRNGMDGIPGKDGLPGKDG 230
             GPKGD G  G  GL G+ GLPG PG  G P         G  G+ G PG+ G PG  G
Sbjct: 838 MPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAG 897

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  G  G+ G  G  G RG  G  G
Sbjct: 898 APGLPGEKGDHGFPGSSGPRGDPGFKG 924



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 81/180 (45%), Gaps = 51/180 (28%)

Query: 114 LQGPIGQKGEIGAKGEMGVKG--------------ERGEKGAPGV-----------VGPP 148
            QGP G KGE G  G  GV G              E+G+KG PG             G P
Sbjct: 224 FQGPKGDKGEQGVSGPPGVPGQAQVKEKGDFAPTGEKGQKGEPGFQGTPGYGEKGEPGKP 283

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------------IGLD 196
           GP+G PG +G++G KG  G+PG  G PG  G++GP+G+ G PG             +G  
Sbjct: 284 GPRGKPGKDGEKGEKGSPGFPGESGYPGLPGRQGPQGEKGEPGLPGPPGTVVGTRPLGEK 343

Query: 197 GRDGLPGEPGLDGIPGRNGMD-----------GIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           G  G PG PGL G PG  G              +PG+ G P   G PG  G  GE+G  G
Sbjct: 344 GERGYPGSPGLRGEPGPKGYPGSPGQPGPPGFAVPGQTGAP---GFPGERGEKGERGSPG 400



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 92/225 (40%), Gaps = 67/225 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--PGPQGIPGDEGKRGPKGDMGYP 169
           PG  GP G +G  G  G  G  GE+G  G PG+  P  PGP+G+ G  G+ G  G  G P
Sbjct: 657 PGFPGPQGDRGFPGTPGRPGNPGEKGAVGQPGIGFPGLPGPKGVDGLPGEIGRPGSPGRP 716

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------IPGRNGMDGIP 220
           G  G+PG+ G +G KG+ G  G  GL G+ GLPG PG  G         +PG  G+ G P
Sbjct: 717 GFNGLPGNPGPQGQKGEPGI-GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPP 775

Query: 221 GKDGLPGKDGIPGTNG--------------------------------TNGEKG------ 242
           G  G+ G  G PG  G                                  GEKG      
Sbjct: 776 GLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPG 835

Query: 243 --MTGPRGNRGKSGI---------------NGVPGTPAICAYKRE 270
             M GP+G++G  G+                G PG P     K E
Sbjct: 836 LDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGE 880



 Score = 46.2 bits (108), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 60/123 (48%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           EIG  G+ G KG+RG               +PG +G  G       PGPQG PG  G+ G
Sbjct: 487 EIGFPGQPGAKGDRG---------------LPGRDGLEG------LPGPQGSPGLIGQPG 525

Query: 183 PKGDMGYPGRIGLD----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            KG+   PG I  D    G  G PG PG  G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 526 AKGE---PGEIFFDMRLKGDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGLK 582

Query: 239 GEK 241
           GE+
Sbjct: 583 GER 585


>gi|270015909|gb|EFA12357.1| hypothetical protein TcasGA2_TC002063 [Tribolium castaneum]
          Length = 700

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 77/143 (53%), Gaps = 15/143 (10%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           +G  G +G  G+ G+ G  G  GAPG  G PG  G  G++G  GP G +G+PGP+G+ GD
Sbjct: 460 LGPPGVMGPHGKPGIPGLPGADGAPGSPGSPGAMGPKGEQGLAGPAGPVGFPGPRGVKGD 519

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
           EGKRG  G+ G  G  GL+      GE G  G+ G  G+ G+P         GIPG  G 
Sbjct: 520 EGKRGILGEKGDKGDRGLE------GEKGDLGMKGSVGLVGLP---------GIPGLEGP 564

Query: 238 NGEKGMTGPRGNRGKSGINGVPG 260
            G KG  GPRG  G  G+ G  G
Sbjct: 565 EGPKGFDGPRGETGNVGLPGEKG 587



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 84/155 (54%), Gaps = 21/155 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G  G  G+ G MG KGE+G  G  G VG PGP+G+ GDEGKRG  G+      
Sbjct: 475 PGLPGADGAPGSPGSPGAMGPKGEQGLAGPAGPVGFPGPRGVKGDEGKRGILGE------ 528

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGK 228
           +G  GD G  G KGD+G  G +GL    GLPG PGL+G  G  G DG  G+    GLPG+
Sbjct: 529 KGDKGDRGLEGEKGDLGMKGSVGL---VGLPGIPGLEGPEGPKGFDGPRGETGNVGLPGE 585

Query: 229 DGIPGTN---------GTNGEKGMTGPRGNRGKSG 254
            G  G           G  G+KG +G  G+ G+ G
Sbjct: 586 KGKDGPPGLPGYPGNLGEKGDKGSSGKIGDNGEKG 620



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 88/177 (49%), Gaps = 30/177 (16%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           + GP G KGE G  G  G+ G++GE+G PG+VG PG +G  G +G+ GP G  G PG  G
Sbjct: 342 ITGPPGPKGEQGLLGLPGLPGDKGERGLPGLVGEPGLRGHDGMQGEEGPPGLSGMPGEMG 401

Query: 174 IPG------------------DEGKRGPKGD------------MGYPGRIGLDGRDGLPG 203
             G                  +EG  G KG             +G PG +G  G  GL G
Sbjct: 402 PRGFTGPRGLPGVPGPPGIPGNEGSAGSKGQAGPPGSPGAPGLVGPPGAVGPPGPHGLLG 461

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG+ G  G+ G+ G+PG DG PG  G PG  G  GE+G+ GP G  G  G  GV G
Sbjct: 462 PPGVMGPHGKPGIPGLPGADGAPGSPGSPGAMGPKGEQGLAGPAGPVGFPGPRGVKG 518


>gi|732526|gb|AAA64312.1| alpha2(IV) collagen [Caenorhabditis elegans]
          Length = 1795

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 91/168 (54%), Gaps = 25/168 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G KG++G  G  G+ G++GE G  GV G PG  G PG       KGD G PG 
Sbjct: 827 PGLPGIPGPKGDVGNPGLPGLNGQKGEPGV-GVPGQPGSPGFPGL------KGDAGLPGL 879

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------EPGLDGIPGRNGMDGI 219
            G PG EG+RG      +PG  GL G DGLPG            + GL G+PGR G  G 
Sbjct: 880 PGTPGLEGQRG------FPGAPGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGF 933

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           PG+DGLPG  G+ G +G  G  G+TG +G+ G  G +G PG P    Y
Sbjct: 934 PGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAPGY 981



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 90/185 (48%), Gaps = 32/185 (17%)

Query: 119  GQKGEIGAK---------------GEMGVKGERGEKGAPGVVGPPGP---------QGIP 154
            G  G  G K               G  G+KG+RG  G PG  G  GP          G+P
Sbjct: 1019 GMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGEAGPAARDGQKGDAGLP 1078

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDE-----GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            G  G RGP+G  G PG  G  G+      G+ G  G+ G PG  G  GR G PG PG DG
Sbjct: 1079 GQPGLRGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDG 1138

Query: 210  IPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            +PG  GM    G PG+DGLPG+DG+PG  G  G+ G +G  G  G  G++G PG P I  
Sbjct: 1139 LPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRG 1198

Query: 267  YKRES 271
             K + 
Sbjct: 1199 DKGQG 1203



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 95/184 (51%), Gaps = 32/184 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG-----ERGEKGAPGVVGPPGPQGIPGDEGKRG----P- 162
            G QGP G  G  G KGE G+ G     + GEKG PG+ G  G QG PG  G+ G    P 
Sbjct: 1085 GPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDGLPGFPG 1144

Query: 163  -KGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             KG+ GYPG  G+PG +   G  G KGD+G  G+ GL G  GL G+PG+ GI G  G  G
Sbjct: 1145 MKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGG 1204

Query: 219  IPGKDGLPGKDGIPGTNGTNG------------EKGMTGP------RGNRGKSGINGVPG 260
            +PG  G  G DG PG  G NG            EKG  G       +G+ G  G +G+PG
Sbjct: 1205 LPGIPGDRGMDGYPGQKGENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPG 1264

Query: 261  TPAI 264
             P +
Sbjct: 1265 IPGL 1268



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL G  GQKGE G    +GV G+ G  G PG+    G PG  G PG EG+RG  G  G 
Sbjct: 842 PGLPGLNGQKGEPG----VGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGL 897

Query: 169 PGPQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-- 223
            G  G+PG  G+ G    KGD G PG  G +G  G PG+ GL G+PG  G DG+PG    
Sbjct: 898 KGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGV 957

Query: 224 -GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL G  G PG +G  G  G  G  G +G +GI GVPG
Sbjct: 958 TGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPG 995



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 94/196 (47%), Gaps = 22/196 (11%)

Query: 82   NNPWV-WLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG 140
             NP +  LN     P V + G   S      PG  G  G  G  G  G  G++G+RG  G
Sbjct: 840  GNPGLPGLNGQKGEPGVGVPGQPGS------PGFPGLKGDAGLPGLPGTPGLEGQRGFPG 893

Query: 141  APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            APG+ G  G  G+ G  G  G KGD G PG   +PG EG  G  G  G PG  G+ G DG
Sbjct: 894  APGLKGGDGLPGLSGQPGYPGEKGDAGLPG---VPGREGSPGFPGQDGLPGVPGMKGEDG 950

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG------------PRG 248
            LPG PG+ G+ G  G  G  G  GLPG  G PG  G  G  G+ G              G
Sbjct: 951  LPGLPGVTGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNG 1010

Query: 249  NRGKSGINGVPGTPAI 264
             +G+ G+ G+PGTP +
Sbjct: 1011 PKGEPGVPGMPGTPGM 1026



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 65/117 (55%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G+PG +G+ G  G  G PG +G  G  G  G KGD+G  G  G  G DGLPG PG DG P
Sbjct: 1326 GLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQP 1385

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G+ G  G  GLPG+ G PG  G  GE G+ G  G +G++G  G PG P     K
Sbjct: 1386 GIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEK 1442



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 80/175 (45%), Gaps = 29/175 (16%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG------------------------IPGDEGKR 160
           G KGE G  G  GE G PG  G PG +G                        +PG  G  
Sbjct: 774 GTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIP 833

Query: 161 GPKGDMGYPGPQGIPGDEGKRG-----PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           GPKGD+G PG  G+ G +G+ G       G  G+PG  G  G  GLPG PGL+G  G  G
Sbjct: 834 GPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPG 893

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G+ G DGLPG  G PG  G  G+ G+ G  G  G  G  G  G P +   K E
Sbjct: 894 APGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGE 948



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 85/162 (52%), Gaps = 19/162 (11%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------KRGPKGDMGYP 169
           G+ G  G  G KGE G  G PG VG PG  G+PG +G              G  GD G+ 
Sbjct: 765 GQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGF- 823

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
              G+PG  G  GPKGD+G PG  GL+G+    GEPG+ G+PG+ G  G PG  G  G  
Sbjct: 824 --GGVPGLPGIPGPKGDVGNPGLPGLNGQK---GEPGV-GVPGQPGSPGFPGLKGDAGLP 877

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G+PGT G  G++G  G  G +G  G+ G+ G P     K ++
Sbjct: 878 GLPGTPGLEGQRGFPGAPGLKGGDGLPGLSGQPGYPGEKGDA 919



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 77/149 (51%), Gaps = 15/149 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G+ G  G  G+  + G  G+ G PG+ G PG +G  G  G RGP GD      
Sbjct: 476 PGLPGPKGEPGYRGTPGQS-IPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDS----L 530

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-----MDGIPGKDGLP 226
            G+PG  G+RG  G  GY GR   DG +GLPG PG  G   R G       G  G+ GLP
Sbjct: 531 NGLPGAPGQRGAPGPNGYDGR---DGVNGLPGAPGTKGD--RGGTCSACAPGTKGEKGLP 585

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G  G PG  G  G  GM GP G+ G  G+
Sbjct: 586 GYSGQPGPQGDRGLPGMPGPVGDAGDDGL 614



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 99/235 (42%), Gaps = 80/235 (34%)

Query: 113  GLQGPIGQKGEIGAKGE---------------MGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            GL G  GQKG++G  G+                G++G++G+ G PG+ G  G  G PG +
Sbjct: 1162 GLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGGLPGIPGDRGMDGYPGQK 1221

Query: 158  GKRG-------------------P-----KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
            G+ G                   P     KG  GYPG  G+PG  G    KGD G+PG+ 
Sbjct: 1222 GENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPGIPGL---KGDSGFPGQP 1278

Query: 194  GLDGRDGLPGE-----------------------------------PGLDGIPGRNGMDG 218
            G +G  GL GE                                   PGL G  G +G+ G
Sbjct: 1279 GQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSG 1338

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP---GTPAICAYKRE 270
            +PG  GL G+ G+PG  G  G+ G  G  G RG+ G+ GVP   G P I   K E
Sbjct: 1339 LPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGE 1393



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 90/193 (46%), Gaps = 59/193 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL+G  G  G  GAKG++   G+ G+RGE G PGV G  G  GIPG +G+ G  G  G 
Sbjct: 1343 PGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPGQ 1402

Query: 169  PGPQGIPGDEGKR------GPKGDMGYPGRIGLDG---------------RDGL------ 201
            PG  GIPG +G+       G KG+ G+PG  G+ G               RDGL      
Sbjct: 1403 PGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGLPGLPGRDGLPGADGP 1462

Query: 202  --------------PGE---PGLDGIPGRNGMDGIPGKDGLP------------GKDGIP 232
                          PGE   PGL G PG  G  G+PG DG P            G DG P
Sbjct: 1463 VGPPGPSGPQNLVEPGEKGLPGLPGAPGLRGEKGMPGLDGPPGNDGPPGLPGQRGNDGYP 1522

Query: 233  GTNGTNGEKGMTG 245
            G  G +GEKGM G
Sbjct: 1523 GAPGLSGEKGMGG 1535



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 67/131 (51%), Gaps = 15/131 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G+ G  G  G  G+KGE G  G PG  G  G  GIPG       +G+ G PG 
Sbjct: 1325 PGLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGK------RGEDGLPG- 1377

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
              +PG +G+       G PG  G  G  GLPG+PG  GIPG  G  G+PG  G  G+ G 
Sbjct: 1378 --VPGRDGQ------PGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGF 1429

Query: 232  PGTNGTNGEKG 242
            PGT G  G  G
Sbjct: 1430 PGTPGVPGYAG 1440



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 70/147 (47%), Gaps = 18/147 (12%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GV G  G  G PG  G PG +G PG           G PG  G PG +G  G KG+ 
Sbjct: 465 GAPGVSGPSGIPGLPGPKGEPGYRGTPGQS-------IPGLPGKDGKPGLDGAPGRKGEN 517

Query: 188 GYPGRIGLDGR--DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG---------TNG 236
           G PG  G  G   +GLPG PG  G PG NG DG  G +GLPG  G  G           G
Sbjct: 518 GLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGRDGVNGLPGAPGTKGDRGGTCSACAPG 577

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           T GEKG+ G  G  G  G  G+PG P 
Sbjct: 578 TKGEKGLPGYSGQPGPQGDRGLPGMPG 604



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 85/186 (45%), Gaps = 39/186 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL G  G  GE G  G  GV G  G      + G PGV G  G  G+PG  G  G KGD
Sbjct: 904  PGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGD 963

Query: 166  MGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGR------------DGLPGEPGLDGI 210
            +G PG     G+PG  G  G KG+ G PG  G  G              G PG PG+ G 
Sbjct: 964  LGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNGPKGEPGVPGMPGT 1023

Query: 211  PG------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            PG            R+G+ G+PG  G  G +G+P      GEKG  GP    G+ G  G+
Sbjct: 1024 PGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLP------GEKGEAGPAARDGQKGDAGL 1077

Query: 259  PGTPAI 264
            PG P +
Sbjct: 1078 PGQPGL 1083



 Score = 46.2 bits (108), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 84/169 (49%), Gaps = 30/169 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGE G  G  GV G +G+ GAPG  G PG   +PG  G  G KG+ G PG  
Sbjct: 938  GLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPG---LPGAPGYPGMKGNAGIPG-- 992

Query: 173  GIPG---------DEGKRGPKGDMGYPGRIGLDG------------RDGLPGEPGLDGIP 211
             +PG           G  GPKG+ G PG  G  G            RDGL G PG+ G  
Sbjct: 993  -VPGFKGDGGLPGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDR 1051

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G NG+ G  G+ G   +DG  G  G  G+ G+   RG +G SG+ GVPG
Sbjct: 1052 GFNGLPGEKGEAGPAARDGQKGDAGLPGQPGL---RGPQGPSGLPGVPG 1097



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 84/194 (43%), Gaps = 46/194 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGK 159
           PGL G  GQ G  G  G  G  G  G+ G PG  G             PG QG+PG+   
Sbjct: 697 PGLSGKPGQDGLPGLPGNKGEAG-YGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAP 755

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------- 209
                +   P P G PG  G  G KG+ GYPGR G  G+ G PG PG+ G          
Sbjct: 756 E----NQVNPAPPGQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGL 811

Query: 210 -----------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR--------GNR 250
                        G  G+ GIPG  G  G  G+PG NG  GE G+  P         G +
Sbjct: 812 PGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLK 871

Query: 251 GKSGINGVPGTPAI 264
           G +G+ G+PGTP +
Sbjct: 872 GDAGLPGLPGTPGL 885



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 76/173 (43%), Gaps = 52/173 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----- 167
           GL G  G KG+ G        G +GEKG PG  G PGPQG  G  G  GP GD G     
Sbjct: 556 GLPGAPGTKGDRGGTCSACAPGTKGEKGLPGYSGQPGPQGDRGLPGMPGPVGDAGDDGLP 615

Query: 168 ----------------YPGPQGIPGDEG-------KRGPKGDMGYPGRIGLDGRDGLPGE 204
                           +PG   +PG +G       + GP      PG  GL G +G PG+
Sbjct: 616 GPAGRPGSPGPPGQDGFPG---LPGQKGEPTQLTLRPGP------PGYPGLKGENGFPGQ 666

Query: 205 PGLDGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           PG+DG+PG                 G  G+PG  G PG+DG+PG  G  GE G
Sbjct: 667 PGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPGLPGNKGEAG 719


>gi|312073402|ref|XP_003139504.1| procollagen [Loa loa]
          Length = 1783

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 94/188 (50%), Gaps = 41/188 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK--------------------GAPGVVGPPGPQ 151
            PGLQGP G++G  G+ G  G KGE G                      GAPG+ GP GP+
Sbjct: 825  PGLQGPKGERGYPGSPGLPGAKGEPGLSMTGPPGPPGFPGLKGNDGLPGAPGLPGPEGPR 884

Query: 152  GIPGDEGKRGP---------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
            G+PG  G +G                KGD G+PG   +PG EG  GP G  G PG  G  
Sbjct: 885  GLPGVSGLKGEAGLPGAPGIAGLPGQKGDAGFPG---LPGAEGPVGPPGIAGAPGFPGQK 941

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G DGLPG PG+ G+    G  G+PG  GLPG  G PG  G  G+ G+ G  G +G +G+ 
Sbjct: 942  GEDGLPGLPGVAGL---KGEAGLPGAPGLPGAAGQPGFPGLKGQAGLPGIPGAKGDAGLP 998

Query: 257  GVPGTPAI 264
            G+PG P  
Sbjct: 999  GLPGAPGA 1006



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 91/164 (55%), Gaps = 14/164 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR--GPKGDMG-- 167
            PG++G  G  G+ G  G  G+KGE G +GAPG  G PG   IPG +G    GPKG+ G  
Sbjct: 1243 PGIKGLPGFPGKDGLPGLPGIKGEVGMQGAPGKDGFPG---IPGQKGASIAGPKGNAGAS 1299

Query: 168  -YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
              PG  G+PG  G +G  G  GYPG  G+ G  GLPG      IPG  G  G+PG  GL 
Sbjct: 1300 GLPGKDGLPGLPGMKGEPGLSGYPGASGVKGEAGLPG------IPGAKGEPGLPGLPGLR 1353

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            GKDG+PG  G  G  G+ G +G+ G  G  GVPG P +   K E
Sbjct: 1354 GKDGLPGAPGIAGLPGIPGAKGDAGLPGAPGVPGQPGLLGLKGE 1397



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/162 (46%), Positives = 85/162 (52%), Gaps = 12/162 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
            PG +GP+G  G  GA G  G KGE G  G PGV G  G  G+PG  G  G  G  G+P  
Sbjct: 920  PGAEGPVGPPGIAGAPGFPGQKGEDGLPGLPGVAGLKGEAGLPGAPGLPGAAGQPGFPGL 979

Query: 170  -GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             G  G+PG  G +G  G  G PG  G  G  GL G PGL G+ G +G  G PGKDGLP  
Sbjct: 980  KGQAGLPGIPGAKGDAGLPGLPGAPGAKGERGLAGLPGLPGMKGASGYPGAPGKDGLP-- 1037

Query: 229  DGIPGT------NGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             GIPG       NG  GEKG  GP    G  G  G+PG P +
Sbjct: 1038 -GIPGAKGERGFNGLPGEKGEPGPAARDGAKGDAGLPGAPGL 1078



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 87/153 (56%), Gaps = 6/153 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G +G  G  G   +KGE G  GAPG+ G PG +G  G  G  G +G +G PG 
Sbjct: 875  PGLPGPEGPRGLPGVSG---LKGEAGLPGAPGIAGLPGQKGDAGFPGLPGAEGPVGPPGI 931

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PG  G++G  G  G PG  GL G  GLPG PGL G  G+ G  G+ G+ GLP   GI
Sbjct: 932  AGAPGFPGQKGEDGLPGLPGVAGLKGEAGLPGAPGLPGAAGQPGFPGLKGQAGLP---GI 988

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PG  G  G  G+ G  G +G+ G+ G+PG P +
Sbjct: 989  PGAKGDAGLPGLPGAPGAKGERGLAGLPGLPGM 1021



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 91/164 (55%), Gaps = 11/164 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE-----KGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            PG++G +G +G  G  G  G+ G++G      KG  G  G PG  G+PG  G +G  G  
Sbjct: 1261 PGIKGEVGMQGAPGKDGFPGIPGQKGASIAGPKGNAGASGLPGKDGLPGLPGMKGEPGLS 1320

Query: 167  GYPGPQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPG---LDGIPGRNGMDGIP 220
            GYPG  G+ G+ G  G    KG+ G PG  GL G+DGLPG PG   L GIPG  G  G+P
Sbjct: 1321 GYPGASGVKGEAGLPGIPGAKGEPGLPGLPGLRGKDGLPGAPGIAGLPGIPGAKGDAGLP 1380

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+PG+ G+ G  G  G  G  GP+G  G  G  G+PG P +
Sbjct: 1381 GAPGVPGQPGLLGLKGEPGLPGFPGPKGEAGIPGKPGLPGLPGL 1424



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 100/215 (46%), Gaps = 48/215 (22%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVV------GPPGPQGIPGDEGKRGPKGDMGYPGP-- 171
           QKGE G  G  G +G  G  G P V       GPPG  G+P   G  GPKGD GYPG   
Sbjct: 726 QKGEAGIPGLPGAQGPVGPMGPP-VAESQLKPGPPGKDGLP---GLPGPKGDAGYPGAPG 781

Query: 172 -QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIPGKDG 224
            +G+PG  G  GPKG  G PG  G+DG+ GLP      G+PGL G+ G  G  G PG  G
Sbjct: 782 KEGVPGLPGLPGPKGSEGMPGPPGIDGQPGLPGPKGNAGKPGLPGLQGPKGERGYPGSPG 841

Query: 225 LPGKDGIPG-----------------TNGTNGEKGMTGPRGNRGKSGIN------GVPGT 261
           LPG  G PG                  +G  G  G+ GP G RG  G++      G+PG 
Sbjct: 842 LPGAKGEPGLSMTGPPGPPGFPGLKGNDGLPGAPGLPGPEGPRGLPGVSGLKGEAGLPGA 901

Query: 262 PAICAYKRESCSL----LPNSETSQLLIPPTIVGS 292
           P I     +        LP +E    + PP I G+
Sbjct: 902 PGIAGLPGQKGDAGFPGLPGAEGP--VGPPGIAGA 934



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 95/197 (48%), Gaps = 40/197 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QG  GQKG  GA G  G+KG+ G  GAPG+ G  G  G+PG +G+ G  G  G PG  
Sbjct: 1121 GRQGAPGQKGLDGAPGFPGLKGDAGLPGAPGIPGQIGLPGLPGQKGEAGFPGQSGLPGAP 1180

Query: 173  GIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGE------------------------- 204
            G+PG     G RG KG  G PG  G  G DGLPG+                         
Sbjct: 1181 GLPGKMGVPGIRGDKGVPGIPGAPGDRGLDGLPGQKGEPGLPGLQGPMGPPGPKGNIGAP 1240

Query: 205  --PGLDGIPGRNGMDGIPGKDGL---------PGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
              PG+ G+PG  G DG+PG  G+         PGKDG PG  G  G   + GP+GN G S
Sbjct: 1241 GYPGIKGLPGFPGKDGLPGLPGIKGEVGMQGAPGKDGFPGIPGQKGAS-IAGPKGNAGAS 1299

Query: 254  GINGVPGTPAICAYKRE 270
            G+ G  G P +   K E
Sbjct: 1300 GLPGKDGLPGLPGMKGE 1316



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 90/196 (45%), Gaps = 49/196 (25%)

Query: 107 KEYCP--PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           KE  P  PGL GP         KG  G+ G  G  G PG+ GP G  G PG  G +GPKG
Sbjct: 782 KEGVPGLPGLPGP---------KGSEGMPGPPGIDGQPGLPGPKGNAGKPGLPGLQGPKG 832

Query: 165 DMGYPGPQGIPGDEGK-----------------------------RGPKGDMGYPGRIGL 195
           + GYPG  G+PG +G+                              GP+G  G PG  GL
Sbjct: 833 ERGYPGSPGLPGAKGEPGLSMTGPPGPPGFPGLKGNDGLPGAPGLPGPEGPRGLPGVSGL 892

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  GLPG PG+ G+PG+ G  G P         G+PG  G  G  G+ G  G  G+ G 
Sbjct: 893 KGEAGLPGAPGIAGLPGQKGDAGFP---------GLPGAEGPVGPPGIAGAPGFPGQKGE 943

Query: 256 NGVPGTPAICAYKRES 271
           +G+PG P +   K E+
Sbjct: 944 DGLPGLPGVAGLKGEA 959



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/140 (48%), Positives = 75/140 (53%), Gaps = 3/140 (2%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGE G  G  G  G +GE G PG+ G  G  G+PG  G RG  G  G PG  
Sbjct: 1306 GLPGLPGMKGEPGLSGYPGASGVKGEAGLPGIPGAKGEPGLPGLPGLRGKDGLPGAPGIA 1365

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+PG  G +G  G  G PG  G  G  GL GEPGL G PG  G  GIPGK GLP   G+P
Sbjct: 1366 GLPGIPGAKGDAGLPGAPGVPGQPGLLGLKGEPGLPGFPGPKGEAGIPGKPGLP---GLP 1422

Query: 233  GTNGTNGEKGMTGPRGNRGK 252
            G  G  G  G+ G  G  GK
Sbjct: 1423 GLKGDCGVPGVPGRDGAPGK 1442



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/181 (41%), Positives = 90/181 (49%), Gaps = 35/181 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---GPPGPQGIPGDEGKR-------- 160
            PG  G  G  G  GAKGE G  G  GEKG PG     G  G  G+PG  G R        
Sbjct: 1028 PGAPGKDGLPGIPGAKGERGFNGLPGEKGEPGPAARDGAKGDAGLPGAPGLRGPQGPPGL 1087

Query: 161  -------GPKGDMGY-----PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------ 202
                   G  G  GY     PG +GIPG  GK+G     G PG+ GLDG  G P      
Sbjct: 1088 PGLPGIKGEAGKPGYGAPGLPGEKGIPGLPGKQG---RQGAPGQKGLDGAPGFPGLKGDA 1144

Query: 203  GEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            G PG  GIPG+ G+ G+PG+    G PG+ G+PG  G  G+ G+ G RG++G  GI G P
Sbjct: 1145 GLPGAPGIPGQIGLPGLPGQKGEAGFPGQSGLPGAPGLPGKMGVPGIRGDKGVPGIPGAP 1204

Query: 260  G 260
            G
Sbjct: 1205 G 1205



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 95/214 (44%), Gaps = 32/214 (14%)

Query: 86   VWLNAYSRIPLVAMQ-GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
              L     +P  A Q GF     +   PG+ G  G  G  G  G  G KGERG  G PG+
Sbjct: 959  AGLPGAPGLPGAAGQPGFPGLKGQAGLPGIPGAKGDAGLPGLPGAPGAKGERGLAGLPGL 1018

Query: 145  VG---------PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
             G          PG  G+PG  G +G +G  G PG +G PG   + G KGD G PG  GL
Sbjct: 1019 PGMKGASGYPGAPGKDGLPGIPGAKGERGFNGLPGEKGEPGPAARDGAKGDAGLPGAPGL 1078

Query: 196  ---------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                            G  G PG  G  G+PG  G+ G+PGK    G+ G PG  G +G 
Sbjct: 1079 RGPQGPPGLPGLPGIKGEAGKPGY-GAPGLPGEKGIPGLPGKQ---GRQGAPGQKGLDGA 1134

Query: 241  KGMTGPRGNRGKSGINGVPGT---PAICAYKRES 271
             G  G +G+ G  G  G+PG    P +   K E+
Sbjct: 1135 PGFPGLKGDAGLPGAPGIPGQIGLPGLPGQKGEA 1168



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 86/175 (49%), Gaps = 26/175 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G+ G  G  G  GVKGE G  G PG  G PG  G+PG  GK G  G  G  G 
Sbjct: 1308 PGLPGMKGEPGLSGYPGASGVKGEAGLPGIPGAKGEPGLPGLPGLRGKDGLPGAPGIAGL 1367

Query: 172  QGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKD-- 223
             GIPG   D G  G  G  G PG +GL G  GLPG PG     GIPG+ G+ G+PG    
Sbjct: 1368 PGIPGAKGDAGLPGAPGVPGQPGLLGLKGEPGLPGFPGPKGEAGIPGKPGLPGLPGLKGD 1427

Query: 224  ----GLPGKDGIPGTNGT--------------NGEKGMTGPRGNRGKSGINGVPG 260
                G+PG+DG PG  G                GEKG  GP G  G  G  G+PG
Sbjct: 1428 CGVPGVPGRDGAPGKIGEPGPMGPPGAEPLTLRGEKGDQGPMGVPGIRGEKGLPG 1482



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 83/167 (49%), Gaps = 40/167 (23%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGP--------------KGDMGYPGPQGIPGDEGKRGP 183
           E G PG+ G PG  G+PG  G +G               KG+ G      IPG  G +GP
Sbjct: 688 EPGFPGLTGKPGKDGLPGLPGLKGAPGYGLPGLPGLPGQKGEAG------IPGLPGAQGP 741

Query: 184 KGDMGYPG-----RIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKDGLP---GKDGIP 232
            G MG P      + G  G+DGLPG PG     G PG  G +G+PG  GLP   G +G+P
Sbjct: 742 VGPMGPPVAESQLKPGPPGKDGLPGLPGPKGDAGYPGAPGKEGVPGLPGLPGPKGSEGMP 801

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGV---------PGTPAICAYKRE 270
           G  G +G+ G+ GP+GN GK G+ G+         PG+P +   K E
Sbjct: 802 GPPGIDGQPGLPGPKGNAGKPGLPGLQGPKGERGYPGSPGLPGAKGE 848



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/116 (50%), Positives = 67/116 (57%), Gaps = 10/116 (8%)

Query: 112 PGLQGPI---GQKGE-IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           PGL GP+   G KG  IG +G  G+KGE+GE G PG  G PG  G PG  G  G KG+ G
Sbjct: 268 PGLPGPVPSTGAKGTIIGPQGSPGMKGEKGEPGEPGARGYPGNAGAPGQPGFPGMKGEKG 327

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
             GP G  G EG+ G  G  G+ G  GL   DGLPG PGL   PG+ G  G PG+D
Sbjct: 328 LSGPAGPRGKEGRPGLPGPPGFKGDRGL---DGLPGVPGL---PGQKGEPGFPGRD 377



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 67/137 (48%), Gaps = 29/137 (21%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GP+GI G++G +G +G  G PG   +PG     G KG +     IG  G  G+ GE    
Sbjct: 248 GPRGIQGEKGMKGDQGPRGLPG---LPGPVPSTGAKGTI-----IGPQGSPGMKGE---K 296

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS--------------- 253
           G PG  G  G PG  G PG+ G PG  G   EKG++GP G RGK                
Sbjct: 297 GEPGEPGARGYPGNAGAPGQPGFPGMKG---EKGLSGPAGPRGKEGRPGLPGPPGFKGDR 353

Query: 254 GINGVPGTPAICAYKRE 270
           G++G+PG P +   K E
Sbjct: 354 GLDGLPGVPGLPGQKGE 370



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 75/130 (57%), Gaps = 13/130 (10%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGP-P---------GPQGIPGDEGKRGPKGD---MGY 168
           G  G +GE G+KG++G +G PG+ GP P         GPQG PG +G++G  G+    GY
Sbjct: 248 GPRGIQGEKGMKGDQGPRGLPGLPGPVPSTGAKGTIIGPQGSPGMKGEKGEPGEPGARGY 307

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG  G PG  G  G KG+ G  G  G  G++G PG PG  G  G  G+DG+PG  GLPG+
Sbjct: 308 PGNAGAPGQPGFPGMKGEKGLSGPAGPRGKEGRPGLPGPPGFKGDRGLDGLPGVPGLPGQ 367

Query: 229 DGIPGTNGTN 238
            G PG  G +
Sbjct: 368 KGEPGFPGRD 377



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 95/244 (38%), Gaps = 95/244 (38%)

Query: 112 PGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--- 165
           PGL G  GQKGE G    +   G+KGE+G  G PG+ GP G +G+ G  G +GP GD   
Sbjct: 550 PGLPGLPGQKGERGGSCSICVPGMKGEKGSDGYPGLPGPQGERGLTGVPGDQGPPGDDGM 609

Query: 166 -------------------------------MGYPGPQGIPGDEGKRGPKG--------- 185
                                          +  PGP G PG +G+ G  G         
Sbjct: 610 PGAPGRPGPPGPPGKDGIPGLPGQKGEPTHMVLRPGPPGYPGQKGEAGFPGLPGQIGLPG 669

Query: 186 ------------------DMGYPGRIGLDGRDGLPGEPGLDGIP--------------GR 213
                             + G+PG  G  G+DGLPG PGL G P              G 
Sbjct: 670 KPGPPGLPGLPGIPGPKGEPGFPGLTGKPGKDGLPGLPGLKGAPGYGLPGLPGLPGQKGE 729

Query: 214 NGMDGIPG-----------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G+ G+PG                 K G PGKDG+PG  G  G+ G  G  G  G  G+ 
Sbjct: 730 AGIPGLPGAQGPVGPMGPPVAESQLKPGPPGKDGLPGLPGPKGDAGYPGAPGKEGVPGLP 789

Query: 257 GVPG 260
           G+PG
Sbjct: 790 GLPG 793



 Score = 40.0 bits (92), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 75/192 (39%), Gaps = 71/192 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGE G  G  G++G+ G  GAPG+ G PG   IPG +G  G  G  G PG  
Sbjct: 1333 GLPGIPGAKGEPGLPGLPGLRGKDGLPGAPGIAGLPG---IPGAKGDAGLPGAPGVPGQP 1389

Query: 173  GI------PGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGLD------------ 208
            G+      PG  G  GPKG+ G PG+ GL G  GL      PG PG D            
Sbjct: 1390 GLLGLKGEPGLPGFPGPKGEAGIPGKPGLPGLPGLKGDCGVPGVPGRDGAPGKIGEPGPM 1449

Query: 209  --------------------GIPGRNG------------------------MDGIPGKDG 224
                                G+PG  G                         DG PG  G
Sbjct: 1450 GPPGAEPLTLRGEKGDQGPMGVPGIRGEKGLPGLDGLPGPSGPPGPPGLKGADGFPGLPG 1509

Query: 225  LPGKDGIPGTNG 236
            LPG+ G PG  G
Sbjct: 1510 LPGEKGAPGLPG 1521


>gi|426220721|ref|XP_004004562.1| PREDICTED: collagen alpha-2(V) chain [Ovis aries]
          Length = 1499

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 89/207 (42%), Gaps = 54/207 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQG---------PIGQKGEIGAKGEMGVKGERGEKGAPGV---- 144
            M+G    T    P G QG         PIG +G  GA G  G  G +G  G+PG     
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGETGPPGPIGSQGLPGAVGTDGTPGAKGPTGSPGTSGPP 443

Query: 145 --------------VGPPGPQGIPGDEGKRGPKGDMG---YPGPQGI------PGDEGKR 181
                          GPPG +G PGD G  G KG+ G    PGP GI      PG+EGKR
Sbjct: 444 GLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKR 503

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP+GD                  PG  G PG  G  G PG  G PG DG+PG  G  GE+
Sbjct: 504 GPRGD------------------PGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGER 545

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G +G  G  G PG P +   +
Sbjct: 546 GPVGSSGPKGGQGDPGRPGEPGLPGAR 572



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 88/201 (43%), Gaps = 30/201 (14%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  G+ G  GP GP G  G  G R
Sbjct: 279 GFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPMGPR 338

Query: 161 GPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G+ G  GPQG PG        GK GP G +G PG  G  G  G+ GE G  G  G  
Sbjct: 339 GMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGPTGARGPE 398

Query: 215 GMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGN---------------------R 250
           G  G  G+ G P   G  G+PG  GT+G  G  GP G+                      
Sbjct: 399 GPQGQRGETGPPGPIGSQGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGST 458

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  GI G PG P +  +K E+
Sbjct: 459 GPPGIRGQPGDPGVPGFKGEA 479



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 77/169 (45%), Gaps = 21/169 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G  GE G  G  G  G+RG  G PG  GP GP GIPG  G  G  G  G  GP 
Sbjct: 333 GPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGPT 392

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG----------- 221
           G  G EG +G +G+ G PG IG     GLPG  G DG PG  G  G PG           
Sbjct: 393 GARGPEGPQGQRGETGPPGPIG---SQGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPP 449

Query: 222 -------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                    G PG  G PG  G  G KG  GP+G  G  GI G  G P 
Sbjct: 450 GSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPG 498



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 78/145 (53%), Gaps = 6/145 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G  G +G  G  
Sbjct: 267 GEPGRNGKPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPT 326

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G +G  GP+G RG++G  G
Sbjct: 387 GEAGPTGARGPEGPQGQRGETGPPG 411



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 70/145 (48%), Gaps = 27/145 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------------------ERGEKGAPGVVGPPGPQ 151
           G  GP G +G IG KG  G  G                     E+GE G  G+VGPPG +
Sbjct: 771 GTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPSGPTGEKGEPGPRGLVGPPGSR 830

Query: 152 GIPGDEGKRGPKGDMGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G PG  G+ GP G +G+ GPQ      G+ G+ G+ G KGD G PG  GL G  G  G  
Sbjct: 831 GNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPN 890

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDG 230
           G+ G+ G  G  G PG  G PG  G
Sbjct: 891 GVPGLKGGRGTQGPPGATGFPGSAG 915



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 86/160 (53%), Gaps = 18/160 (11%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------GIPGDEGKRG 161
           LQG  G++G  G  G  G +G  GEKGA G  G  G +            G  G++G+ G
Sbjct: 760 LQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPSGPTGEKGEPG 819

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           P+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG    PG+ G  G PG
Sbjct: 820 PRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE---PGQKGDAGSPG 876

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 877 PQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 86/198 (43%), Gaps = 33/198 (16%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGP--- 147
           V   G         P G  GP+G +G  G +G +G +G  G++GA      PG +GP   
Sbjct: 314 VGATGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGI 373

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G +G  G  G  GP+G  G  G+ GP G +G  G  G  G DG PG  G 
Sbjct: 374 PGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPIGSQGLPGAVGTDGTPGAKGP 433

Query: 208 DGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR----- 247
            G PG                 G  G PG  G PG  G+PG  G  G KG  GP      
Sbjct: 434 TGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGP 493

Query: 248 ----GNRGKSGINGVPGT 261
               G  GK G  G PGT
Sbjct: 494 IGPPGEEGKRGPRGDPGT 511



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 79/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------------KGD 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP                   G 
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGAPGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+ G  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLLGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           PG+PG  G  G  G  G PG+ G PG  G+P      GEKGM G
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLP------GEKGMAG 735



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 69/150 (46%), Gaps = 2/150 (1%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G  G  G  G+PG  G+PG +G RG KG  G  G +G  G  G  G  G 
Sbjct: 269 PGRNGKPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGP 328

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G  G  G  G+PG+ G  G  G PG  G +G  G  GP G  G  G  G PG P +   
Sbjct: 329 MGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMKGE 388

Query: 268 KRESCSLLPNSETSQL--LIPPTIVGSEHI 295
              + +  P     Q     PP  +GS+ +
Sbjct: 389 AGPTGARGPEGPQGQRGETGPPGPIGSQGL 418



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 80/200 (40%), Gaps = 48/200 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGVGPAGPPGEPGDPGPMGPIGARGPEGPPGKPGEDGEPGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G  G +G+ GP G MG 
Sbjct: 272 NGKPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 332 MGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGINGVPGTPA 263
           TG RG  G  G  G  G P 
Sbjct: 392 TGARGPEGPQGQRGETGPPG 411



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 89/233 (38%), Gaps = 84/233 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP    G+PG +G R   GP G  
Sbjct: 849  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 908

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 909  GFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 968

Query: 194  ---------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
                                 G  G  G+PG+ G  G+PG  G  G PGK G        
Sbjct: 969  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGAPGDK 1028

Query: 226  -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                             PG +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 1029 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1081



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 49/90 (54%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+ G +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLLGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 86/205 (41%), Gaps = 66/205 (32%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 601 PPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 660

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PGD G     GP+G+ G PG   
Sbjct: 661 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGER- 719

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDG---------------------IPGKDGLPGKDGIPG 233
                   GEPG+ G+PG  GM G                      PG  G+PG+ GI G
Sbjct: 720 --------GEPGITGLPGEKGMAGGHGPDGPKGSPGPPGTPGDTGPPGLQGMPGERGIAG 771

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGV 258
           T G  G++G  G +G  G +G +G 
Sbjct: 772 TPGPKGDRGGIGEKGAEGTAGNDGA 796



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 80/197 (40%), Gaps = 63/197 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 886  PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 946  DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1005

Query: 228  KDGIPGTNGTNGEKGMT 244
              G+PG  GT G+ G T
Sbjct: 1006 MPGLPGPAGTPGKVGPT 1022


>gi|183980002|ref|NP_001103810.2| collagen, type IV [Bombyx mori]
 gi|183397303|gb|ABW72726.2| type IV collagen [Bombyx mori]
 gi|183397305|gb|ABW72727.2| type IV collagen [Bombyx mori]
          Length = 819

 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 102/208 (49%), Gaps = 32/208 (15%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKG--APGVVGPPGPQGIPG------DEGKRG- 161
           PPGL GP G  G  G  GE G +GE+G  G  APG  G  GP GIPG      D+G RG 
Sbjct: 401 PPGLVGPTGLPGTPGITGEKGDRGEKGATGFGAPGQKGDQGPSGIPGLPGEKGDKGDRGL 460

Query: 162 --------------PKGDMGYPGPQGIPGDEGKRGPKGDM--------GYPGRIGLDGRD 199
                          KGD GYPG  G+ G++G +G KG          G PG  GL G D
Sbjct: 461 DGLPGRTGPIGPPGQKGDRGYPGRPGLQGEQGMKGNKGQAAELVYGAKGEPGPRGLPGND 520

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           GLPG  G+ G PG NG  G  G  G  G  G PG  G  G +GM G RG  G +G +G+P
Sbjct: 521 GLPGVNGVPGRPGNNGPPGEKGDRGFTGARGFPGPRGLPGIQGMEGERGEIGMTGQSGLP 580

Query: 260 GTP-AICAYKRESCSLLPNSETSQLLIP 286
           G P A C  +     +L    + + ++P
Sbjct: 581 GAPGAPCVSQDFLTGILLVRHSQREVVP 608



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/214 (38%), Positives = 103/214 (48%), Gaps = 60/214 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------IPG 155
           PG+ G  G KGE+G  G  G+ G +G++G PG  GP GP G                I G
Sbjct: 210 PGITGEKGDKGELGFPGRDGLGGLKGDRGQPGAEGPIGPIGYRGPKGDTGLPGVSIDIKG 269

Query: 156 DEGKRGP---------KGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIG--------- 194
           D+G+ GP         KGD G PG QG+ G++G RG    KGD G+ GR+G         
Sbjct: 270 DKGEVGPSGIPGEPGQKGDRGLPGLQGLQGEKGDRGSLGEKGDQGFTGRMGEKGDTGPIG 329

Query: 195 --------LDGRDGLPG------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                   + G  GLPG       PGL G PG+ G  G+PG   LPG+ G PG  G  GE
Sbjct: 330 PTGLPGLTIKGEKGLPGTHGKHGRPGLPGAPGQKGDQGLPG---LPGQLGRPGIPGLPGE 386

Query: 241 KGMTGPRGNRGKSGI------NGVPGTPAICAYK 268
           KG  G +GN G +G        G+PGTP I   K
Sbjct: 387 KGQKGDQGNEGLAGPPGLVGPTGLPGTPGITGEK 420



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 82/178 (46%), Positives = 96/178 (53%), Gaps = 31/178 (17%)

Query: 113 GLQGPIGQKGEIG------------AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G+QGP GQKG  G            A G  G KG++GE G PG+ G PG  G PG  G +
Sbjct: 2   GIQGPDGQKGFPGSRGRPGPPGHPGALGSQGEKGDKGELGYPGLPGSPGQSGRPGPVGPQ 61

Query: 161 GPKGDMGYPGPQGIP---------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---D 208
           GPKGD G+ GP G+P         GD G  GPKGD G  G     G  G PG PGL   D
Sbjct: 62  GPKGDQGFEGPPGLPGLPGLLGQTGDRGYTGPKGDKGDAGLAAEKGSKGEPGPPGLLGID 121

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------TGPRGNRGKSGINGVPG 260
           G+PGR+G  G  G+ G+PG+ GIPG  G  GE GM      +GP G +G  G  GVPG
Sbjct: 122 GLPGRDGEKGDTGEPGIPGQ-GIPGYPGQKGEMGMRGFDGLSGPIGEKGNRGPQGVPG 178



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 87/160 (54%), Gaps = 12/160 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGLQG  G+KG+ G+ GE G +G  G  G  G  GP GP G+PG    +G KG  G  G 
Sbjct: 292 PGLQGLQGEKGDRGSLGEKGDQGFTGRMGEKGDTGPIGPTGLPGLT-IKGEKGLPGTHGK 350

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G PG  G  G KGD G PG  G  GR G+PG PG  G  G  G +G+ G  GL G  G+
Sbjct: 351 HGRPGLPGAPGQKGDQGLPGLPGQLGRPGIPGLPGEKGQKGDQGNEGLAGPPGLVGPTGL 410

Query: 232 PGTNGTNGEK-----------GMTGPRGNRGKSGINGVPG 260
           PGT G  GEK           G  G +G++G SGI G+PG
Sbjct: 411 PGTPGITGEKGDRGEKGATGFGAPGQKGDQGPSGIPGLPG 450



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 95/177 (53%), Gaps = 25/177 (14%)

Query: 113 GLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPK 163
           GL GPIG+KG  G       KG +G+ GE G  G PG+ G PG  G   +PG  G++G K
Sbjct: 160 GLSGPIGEKGNRGPQGVPGLKGNLGISGEPGRPGVPGIDGAPGQPGDVGLPGITGEKGDK 219

Query: 164 GDMGYPGPQGI---------PGDEGK------RGPKGDMGYPG-RIGLDGRDGLPGEPGL 207
           G++G+PG  G+         PG EG       RGPKGD G PG  I + G  G  G  G+
Sbjct: 220 GELGFPGRDGLGGLKGDRGQPGAEGPIGPIGYRGPKGDTGLPGVSIDIKGDKGEVGPSGI 279

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G PG+ G  G+PG  GL G+ G  G+ G  G++G TG  G +G +G  G  G P +
Sbjct: 280 PGEPGQKGDRGLPGLQGLQGEKGDRGSLGEKGDQGFTGRMGEKGDTGPIGPTGLPGL 336



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 88/161 (54%), Gaps = 10/161 (6%)

Query: 104 NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
            S  E  PPGL G  G  G  G KG+ G  G  G+ G PG  G  G  G+ G +G  GP 
Sbjct: 107 GSKGEPGPPGLLGIDGLPGRDGEKGDTGEPGIPGQ-GIPGYPGQKGEMGMRGFDGLSGPI 165

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G  GPQG+PG +G  G  G+   PGR G+ G DG PG+PG  G+PG  G  G  G+ 
Sbjct: 166 GEKGNRGPQGVPGLKGNLGISGE---PGRPGVPGIDGAPGQPGDVGLPGITGEKGDKGEL 222

Query: 224 GLPGKDGIPGTNGTNGEKGMTGP------RGNRGKSGINGV 258
           G PG+DG+ G  G  G+ G  GP      RG +G +G+ GV
Sbjct: 223 GFPGRDGLGGLKGDRGQPGAEGPIGPIGYRGPKGDTGLPGV 263



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 91/191 (47%), Gaps = 40/191 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL G  G+ G  G  G  G KG++G  G PG +G PG  G+PG++G++G +G+ G  GP 
Sbjct: 343 GLPGTHGKHGRPGLPGAPGQKGDQGLPGLPGQLGRPGIPGLPGEKGQKGDQGNEGLAGPP 402

Query: 172 -----QGIPGDEGKRGPKGDMGYPGRIGLD--GRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                 G+PG  G  G KGD G  G  G    G+ G  G  G+ G+PG  G  G  G DG
Sbjct: 403 GLVGPTGLPGTPGITGEKGDRGEKGATGFGAPGQKGDQGPSGIPGLPGEKGDKGDRGLDG 462

Query: 225 LPGKD------------GIPGTNGTNGEKGMT-----------------GPR---GNRGK 252
           LPG+             G PG  G  GE+GM                  GPR   GN G 
Sbjct: 463 LPGRTGPIGPPGQKGDRGYPGRPGLQGEQGMKGNKGQAAELVYGAKGEPGPRGLPGNDGL 522

Query: 253 SGINGVPGTPA 263
            G+NGVPG P 
Sbjct: 523 PGVNGVPGRPG 533



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP--GVVGPPGPQGIPG 155
            + G    T    PPG +G  G  G  G +GE G+KG +G+      G  G PGP+G+PG
Sbjct: 459 GLDGLPGRTGPIGPPGQKGDRGYPGRPGLQGEQGMKGNKGQAAELVYGAKGEPGPRGLPG 518

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           ++G  G  G  G PG  G PG++G RG  G  G+PG  GL G  G+ GE G  G+ G++G
Sbjct: 519 NDGLPGVNGVPGRPGNNGPPGEKGDRGFTGARGFPGPRGLPGIQGMEGERGEIGMTGQSG 578

Query: 216 MDGIPG 221
           + G PG
Sbjct: 579 LPGAPG 584



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 86/167 (51%), Gaps = 10/167 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G +G +G  G  G +G KG RG +G PG+ G  G  G PG  G  G  G  G PG 
Sbjct: 147 PGQKGEMGMRGFDGLSGPIGEKGNRGPQGVPGLKGNLGISGEPGRPGVPGIDGAPGQPGD 206

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G+PG  G++G KG++G+P      GRDGL G  G  G PG  G  G  G  G  G  G+
Sbjct: 207 VGLPGITGEKGDKGELGFP------GRDGLGGLKGDRGQPGAEGPIGPIGYRGPKGDTGL 260

Query: 232 PGTN----GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           PG +    G  GE G +G  G  G+ G  G+PG   +   K +  SL
Sbjct: 261 PGVSIDIKGDKGEVGPSGIPGEPGQKGDRGLPGLQGLQGEKGDRGSL 307



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 22/158 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ G  GQKGE+G +G  G+ G  GEKG  G      PQG+PG +G  G  G+ G PG  
Sbjct: 142 GIPGYPGQKGEMGMRGFDGLSGPIGEKGNRG------PQGVPGLKGNLGISGEPGRPG-- 193

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            +PG +G  G  GD+G PG  G        G+ G  G PGR+G+ G+ G  G PG +G  
Sbjct: 194 -VPGIDGAPGQPGDVGLPGITGEK------GDKGELGFPGRDGLGGLKGDRGQPGAEGPI 246

Query: 233 GTNGTNGEKGMTGP-------RGNRGKSGINGVPGTPA 263
           G  G  G KG TG        +G++G+ G +G+PG P 
Sbjct: 247 GPIGYRGPKGDTGLPGVSIDIKGDKGEVGPSGIPGEPG 284


>gi|431894985|gb|ELK04778.1| Collagen alpha-2(V) chain [Pteropus alecto]
          Length = 1308

 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 281 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 331

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMGYPGR---IGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+ G     GPKG  G PGR    GL G  GL G PG+ G
Sbjct: 332 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 391

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 392 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 448



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 89/167 (53%), Gaps = 10/167 (5%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   PG  
Sbjct: 271 GIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---PGPV 327

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  G  
Sbjct: 328 GERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGARGLT 384

Query: 239 GEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 385 GNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 431



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 85/196 (43%), Gaps = 48/196 (24%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA------------------ 141
           +G      E  PPG  G  G  G +G  G  G KG  G  G                   
Sbjct: 207 EGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGS 266

Query: 142 ---PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGR 192
              PG+ G PG  G+PG +G+ GPKG+   PGP GI      PG+EGKRGP+GD      
Sbjct: 267 TGLPGIRGQPGDPGVPGFKGEAGPKGE---PGPHGIQGPIGPPGEEGKRGPRGD------ 317

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                       PG  G PG  G  G PG  G PG DG+PG  G  GE+G  G  G +G 
Sbjct: 318 ------------PGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGG 365

Query: 253 SGINGVPGTPAICAYK 268
            G  G PG P +   +
Sbjct: 366 QGDPGRPGEPGLPGAR 381



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 556 GPTGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 615

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 616 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 674

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 675 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 722



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 90/193 (46%), Gaps = 42/193 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G    KGE G  G  G +GP GP+G+PG+ G+ GP      
Sbjct: 105 PGLKGHRGHKGLEGPKGEVGAIGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGP------ 158

Query: 169 PGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
              QG PG        GK GP G +G PG  G  G  G+ GE G  G  G  G  G  G+
Sbjct: 159 ---QGAPGQRGAHGMPGKPGPMGPLGIPGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGE 215

Query: 223 DGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKS---------------------GINGV 258
            G P   G  G+PG  GT+G  G  GP G+ G S                     GI G 
Sbjct: 216 TGPPGPVGSQGLPGAVGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGLPGIRGQ 275

Query: 259 PGTPAICAYKRES 271
           PG P +  +K E+
Sbjct: 276 PGDPGVPGFKGEA 288



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 86/204 (42%), Gaps = 36/204 (17%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L  ++G         P G  G IG KGE G  G MG  G  G +G PG  G  GPQG PG
Sbjct: 104 LPGLKGHRGHKGLEGPKGEVGAIGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPG 163

Query: 156 DEG------KRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             G      K GP G +G PG  G PG+   +G+ GP G  G  G  G  G  G PG  G
Sbjct: 164 QRGAHGMPGKPGPMGPLGIPGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVG 223

Query: 207 LDGIPGRNGMDGIPGKD---------------------------GLPGKDGIPGTNGTNG 239
             G+PG  G DG PG                             GLPG  G PG  G  G
Sbjct: 224 SQGLPGAVGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGLPGIRGQPGDPGVPG 283

Query: 240 EKGMTGPRGNRGKSGINGVPGTPA 263
            KG  GP+G  G  GI G  G P 
Sbjct: 284 FKGEAGPKGEPGPHGIQGPIGPPG 307



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 387 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 446

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 447 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 506

Query: 175 PGDEG---KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 507 PGDPGVVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTPGDTGP 566

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 567 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 599



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 79/155 (50%), Gaps = 3/155 (1%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +G  GA G  G+KG RG KG  G  G  G  G  G+ G  GP G MG  GP+G+PG+ 
Sbjct: 94  GARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAIGSKGEAGPTGPMGAMGPLGPRGMPGER 153

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G+ GP+   G PG+ G  G  G PG  G  GIPG  G  G PG  G  G  G  G  G  
Sbjct: 154 GRLGPQ---GAPGQRGAHGMPGKPGPMGPLGIPGSPGFPGNPGMKGEAGPTGARGPEGPQ 210

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           G++G TGP G  G  G+ G  GT      K  + S
Sbjct: 211 GQRGETGPPGPVGSQGLPGAVGTDGTPGAKGPTGS 245



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 84/198 (42%), Gaps = 36/198 (18%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           +  +G    T      G  GP G  GE G  G  G  G+RG  G PG  GP GP GIPG 
Sbjct: 126 IGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGS 185

Query: 157 ---------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                    +G+ GP G  G  GPQG  G+ G  GP G  G PG +G    DG PG  G 
Sbjct: 186 PGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAVGT---DGTPGAKGP 242

Query: 208 DGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR----- 247
            G PG                 G  G+PG  G PG  G+PG  G  G KG  GP      
Sbjct: 243 TGSPGTSGPPGSAGPPGSPGPQGSTGLPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGP 302

Query: 248 ----GNRGKSGINGVPGT 261
               G  GK G  G PGT
Sbjct: 303 IGPPGEEGKRGPRGDPGT 320



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 83/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGD 165
           PG+ GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG     G  GP G 
Sbjct: 510 PGVVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTPGDTGPPGL 569

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 570 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 629

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 630 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 676



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP         E
Sbjct: 343 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGP---------E 393

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK GP G  G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    
Sbjct: 394 GKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR--- 450

Query: 218 GIPGKDG 224
           G PGKDG
Sbjct: 451 GAPGKDG 457



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 79/161 (49%), Gaps = 30/161 (18%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------------RGPKGDMGY 168
            G +G +G+ G+RGE+G PG+   PGP G PG  G                 G +G +G 
Sbjct: 798 TGQRGIVGMPGQRGERGMPGL---PGPAGTPGKVGATGAPGDKGPPGPVGPPGSQGPVGE 854

Query: 169 PGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G PG 
Sbjct: 855 PGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGS 914

Query: 223 ------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                  G  GK G+ G  G  G+KG  G RG+RG+ G  G
Sbjct: 915 RGPIGPPGRAGKRGLHGPQGPRGDKGDHGDRGDRGQKGHRG 955



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 21/117 (17%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------G 173
           +KGE G +               G+VGPPG +G PG  G+ GP G +G+ GPQ      G
Sbjct: 623 EKGEPGPR---------------GLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPG 667

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           + G+ G+ G KGD G PG  GL G  G  G  G+ G+ G  G  G PG  G PG  G
Sbjct: 668 VKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAG 724



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 89/233 (38%), Gaps = 84/233 (36%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR---GPKGDM 166
           G QGP GQ G  G  GE G KG+ G  G  G+ G PGP    G+PG +G R   GP G  
Sbjct: 658 GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 717

Query: 167 GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
           G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 718 GFPGSAGRVGPPGPIGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 777

Query: 194 ---------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
                                G  G  G+PG+ G  G+PG  G  G PGK G        
Sbjct: 778 GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGATGAPGDK 837

Query: 226 -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                            PG +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 838 GPPGPVGPPGSQGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 890



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 49/90 (54%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 867 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 926

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
           +G+ G +G RG KGD G  G  G  G  G 
Sbjct: 927 RGLHGPQGPRGDKGDHGDRGDRGQKGHRGF 956



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 79/197 (40%), Gaps = 63/197 (31%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 635 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 694

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIGLD---------------GRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 695 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPIGAPGPAGPLGEPGKEGPPGLRG 754

Query: 210 IPG------------------------------------------RNGMDGIPGKDGLPG 227
            PG                                          + G+ G+PG+ G  G
Sbjct: 755 DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 814

Query: 228 KDGIPGTNGTNGEKGMT 244
             G+PG  GT G+ G T
Sbjct: 815 MPGLPGPAGTPGKVGAT 831



 Score = 43.1 bits (100), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G+PG  G+PG +G RG KG  G  G +G  G  G  G  G  G  G  G  G+PG+ 
Sbjct: 94  GARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAIGSKGEAGPTGPMGAMGPLGPRGMPGER 153

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES---CSLLPNSET 280
           G  G  G PG  G +G  G  GP G     GI G PG P     K E+    +  P    
Sbjct: 154 GRLGPQGAPGQRGAHGMPGKPGPMG---PLGIPGSPGFPGNPGMKGEAGPTGARGPEGPQ 210

Query: 281 SQL--LIPPTIVGSEHI 295
            Q     PP  VGS+ +
Sbjct: 211 GQRGETGPPGPVGSQGL 227


>gi|194222045|ref|XP_001496580.2| PREDICTED: collagen alpha-1(IV) chain [Equus caballus]
          Length = 1712

 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 100/206 (48%), Gaps = 42/206 (20%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V   G   +  E   PG+ GP   +G  G  GE G KGE+G+ G PG+       GIPG 
Sbjct: 1056 VGGMGLPGTPGEKGVPGIPGP---QGVPGLPGEKGAKGEKGQAGLPGI-------GIPGR 1105

Query: 157  EGKRGPKGDMGYPG---------PQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGE 204
             G +G +G  G+PG           GIPG  G  GPKG    +GYPG  GL G  G  G 
Sbjct: 1106 PGDKGDQGLAGFPGTPGEKGEKGSAGIPGMPGSPGPKGLPGSVGYPGSPGLPGEKGDKGL 1165

Query: 205  PGLDGIPGRNGMDGIPGK---------DGLPGKDGIPGTNGTNGEKGM-----------T 244
            PGLDGIPG  G  G+PGK          G PG DGIPG+ G  GE G+            
Sbjct: 1166 PGLDGIPGIKGEAGLPGKPGPSGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGTK 1225

Query: 245  GPRGNRGKSGINGVPGTPAICAYKRE 270
            G +G++G  G  G+ G+P I   K E
Sbjct: 1226 GEKGSKGDVGFPGLAGSPGIPGSKGE 1251



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 89/171 (52%), Gaps = 26/171 (15%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GP G KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 1003 GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGVGGTPGAPGLPGPKGSVGGMGLP 1062

Query: 167  ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
                     G PGPQG+PG  G++G KG+        +G PGR G  G  GL G PG  G
Sbjct: 1063 GTPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGLAGFPGTPG 1122

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  GIPG  G PG  G+PG+ G  G  G+ G +G++G  G++G+PG
Sbjct: 1123 EKGEKGSAGIPGMPGSPGPKGLPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 1173



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 88/172 (51%), Gaps = 30/172 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  GQ+G  G  G  G KGE G  G PG  G PGP G+PG  G+   KGD G+PG  
Sbjct: 901  GLPGLPGQQGTPGLPGFPGPKGEMGVMGTPGQPGSPGPAGVPGLPGE---KGDHGFPGSS 957

Query: 173  GIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGLD 208
            G  GD G +G KGD+G PG+                        IG  G  G  G+PG  
Sbjct: 958  GPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGEKGDQGEKGQIGPTGDKGSRGDPGTP 1017

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG++G  G PG+   PG  G PG  GT G  G+ GP+G+ G  G+ G PG
Sbjct: 1018 GVPGKDGQAGHPGQ---PGPKGDPGVGGTPGAPGLPGPKGSVGGMGLPGTPG 1066



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 87/159 (54%), Gaps = 23/159 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+KG+ G KG++G  G++G +G PG  G PG  G  G  G+ GPKGD G  G  G PG  
Sbjct: 991  GEKGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGVGGTPGAPGLP 1050

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--------G 230
            G +G  G MG PG          PGE G+ GIPG  G+ G+PG+ G  G+         G
Sbjct: 1051 GPKGSVGGMGLPG---------TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIG 1101

Query: 231  IPGTNGTNGEKGMT------GPRGNRGKSGINGVPGTPA 263
            IPG  G  G++G+       G +G +G +GI G+PG+P 
Sbjct: 1102 IPGRPGDKGDQGLAGFPGTPGEKGEKGSAGIPGMPGSPG 1140



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 92/184 (50%), Gaps = 32/184 (17%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGP 150
             GF  S+     PG +G    KG++G  G+ G         +KGE+G++G  G +GP G 
Sbjct: 951  HGFPGSSGPRGDPGFKG---DKGDVGLPGKPGSMDKVDMGSMKGEKGDQGEKGQIGPTG- 1006

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGL 207
                 D+G RG  G  G PG  G  G  G+ GPKGD G    PG  GL G  G  G  GL
Sbjct: 1007 -----DKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGVGGTPGAPGLPGPKGSVGGMGL 1061

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG-PR-------GNRGKSGINGVP 259
             G PG  G+ GIPG  G+PG   +PG  G  GEKG  G P        G++G  G+ G P
Sbjct: 1062 PGTPGEKGVPGIPGPQGVPG---LPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGLAGFP 1118

Query: 260  GTPA 263
            GTP 
Sbjct: 1119 GTPG 1122



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 82/170 (48%), Gaps = 24/170 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGP 162
            PG  GP G  G  G KG+ G  G  G +G PG  G  G  G+PG  G          +G 
Sbjct: 933  PGSPGPAGVPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGE 992

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-- 220
            KGD G  G  G  GD+G R   GD G PG  G DG+ G PG+PG  G PG  G  G P  
Sbjct: 993  KGDQGEKGQIGPTGDKGSR---GDPGTPGVPGKDGQAGHPGQPGPKGDPGVGGTPGAPGL 1049

Query: 221  ----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      G  G PG+ G+PG  G  G  G+ G +G +G+ G  G+PG
Sbjct: 1050 PGPKGSVGGMGLPGTPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPG 1099



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 76/155 (49%), Gaps = 23/155 (14%)

Query: 132  VKGERGEKGAPGV--VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG- 188
            VKGE+G  G PG+   GP G +G  G  G  G  G  G PG QG PG  G  GPKG+MG 
Sbjct: 867  VKGEKGFPGFPGLDMPGPKGDKGTQGLPGLTGQSGLPGLPGQQGTPGLPGFPGPKGEMGV 926

Query: 189  -----YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDG------- 230
                  PG  G  G  GLPGE G  G PG +G  G PG  G      LPGK G       
Sbjct: 927  MGTPGQPGSPGPAGVPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDM 986

Query: 231  --IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              + G  G  GEKG  GP G++G  G  G PG P 
Sbjct: 987  GSMKGEKGDQGEKGQIGPTGDKGSRGDPGTPGVPG 1021



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 76/168 (45%), Gaps = 53/168 (31%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVV---GPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GQ G  G+ G  G+ G +GE G   VV   GPPG +G+PG  G +GP+GD G+PG     
Sbjct: 661 GQAGFPGSPGSPGLPGPKGEAGK--VVPLPGPPGAEGLPGSPGFQGPQGDRGFPG----- 713

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDG--------------------LPGEPGLDGIPGRNG 215
                         PGR GL G  G                    LPG+ G  G PGR G
Sbjct: 714 -------------TPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDVGPPGNPGRQG 760

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G+PG  G+PG+ G PG           G  G +G  GI G+PGTP 
Sbjct: 761 FSGLPGSPGVPGQKGEPG----------IGLPGLKGSPGIPGIPGTPG 798



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 94/239 (39%), Gaps = 75/239 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMG-------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           PG QG  G  G+ GAKGE G       +KG++G+ G PG  G PG  G PG +G  G   
Sbjct: 555 PGPQGAPGLMGQPGAKGEPGEIYFDIRLKGDKGDPGFPGQPGMPGRAGSPGRDGHPG--- 611

Query: 165 DMGYPGPQGIPGDEGKRGP--------------------------------KGDMGYPGR 192
               PGP+G PG  G +G                                 KG  G+PG 
Sbjct: 612 ---LPGPKGSPGSVGLKGERGPPGGVGFPGSRGDIGPPGPPGFGPIGPIGDKGQAGFPGS 668

Query: 193 IGLDGRDG----------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE-- 240
            G  G  G          LPG PG +G+PG  G  G  G  G PG  G PG  G  G   
Sbjct: 669 PGSPGLPGPKGEAGKVVPLPGPPGAEGLPGSPGFQGPQGDRGFPGTPGRPGLPGEKGAVG 728

Query: 241 ------------------KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
                              G  GP GN G+ G +G+PG+P +   K E    LP  + S
Sbjct: 729 QPGIGFPGPPGPKGVDGLPGDVGPPGNPGRQGFSGLPGSPGVPGQKGEPGIGLPGLKGS 787



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 92/207 (44%), Gaps = 31/207 (14%)

Query: 49   DNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKE 108
            +  VP  P  + VP    E+  + EK Q               + +P + + G      +
Sbjct: 1067 EKGVPGIPGPQGVPGLPGEKGAKGEKGQ---------------AGLPGIGIPGRPGDKGD 1111

Query: 109  YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------- 161
                G  G  G+KGE G+ G  G+ G  G KG PG VG PG  G+PG++G +G       
Sbjct: 1112 QGLAGFPGTPGEKGEKGSAGIPGMPGSPGPKGLPGSVGYPGSPGLPGEKGDKGLPGLDGI 1171

Query: 162  P--KGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            P  KG+ G PG   P G     G++G  G  G PG  G  G  GLPG  G  G PG  G 
Sbjct: 1172 PGIKGEAGLPGKPGPSGP---AGQKGEPGSDGIPGSAGEKGEPGLPGR-GFPGFPGTKGE 1227

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G  G  G PG  G PG  G+ GE G 
Sbjct: 1228 KGSKGDVGFPGLAGSPGIPGSKGEPGF 1254



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 83/176 (47%), Gaps = 35/176 (19%)

Query: 127 KGEMGV--KGERGEKGAPGVVGPPGPQGIPG--------DEGKRGPKGDMGYPGPQGIPG 176
           KG+MG+  +G +GEKG  GV GPPG   +PG        D   +G KG  G PG QG+PG
Sbjct: 260 KGQMGLSFQGPKGEKGDQGVSGPPG---VPGQAQVKEKGDFATKGEKGQKGEPGFQGMPG 316

Query: 177 -----DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
                + GK GP+G  G  G  G  G  G PG+ G  G+PGR G  G  G+         
Sbjct: 317 VGEKGEPGKPGPRGKPGKDGEKGEKGSTGFPGDSGYPGLPGREGFKGDKGEAGPPGPPGI 376

Query: 224 -------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING--VPGTPAICAYKRE 270
                  G  G+ G PGT G  GE G  G  G +G+    G  VPG P    +  E
Sbjct: 377 VIGTGPLGEKGERGFPGTPGLRGEPGPKGFPGLQGQPVAPGFPVPGQPGAPGFPGE 432



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 83/181 (45%), Gaps = 51/181 (28%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----DE 178
           EIG  G+ G KG+RG  G  G+ G PGPQG PG          MG PG +G PG    D 
Sbjct: 530 EIGFPGQPGAKGDRGLPGRDGLEGLPGPQGAPGL---------MGQPGAKGEPGEIYFDI 580

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
             +G KGD G+PG+                G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 581 RLKGDKGDPGFPGQ---------------PGMPGRAGSPGRDGHPGLPGPKGSPGSVGLK 625

Query: 239 GEKGMTGP------RG-----------------NRGKSGINGVPGTPAICAYKRESCSLL 275
           GE+G  G       RG                 ++G++G  G PG+P +   K E+  ++
Sbjct: 626 GERGPPGGVGFPGSRGDIGPPGPPGFGPIGPIGDKGQAGFPGSPGSPGLPGPKGEAGKVV 685

Query: 276 P 276
           P
Sbjct: 686 P 686



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 89/190 (46%), Gaps = 48/190 (25%)

Query: 119 GQKGEIGAKGEMGVKGERGEKG--APGVVGPPGPQGIPGDEGKRGPK---------GDMG 167
           G++G  G  G  GV G++GE G   PG+ G PG  GIPG  G++G           G +G
Sbjct: 757 GRQGFSGLPGSPGVPGQKGEPGIGLPGLKGSPGIPGIPGTPGEKGSIGGPGIPGEHGAIG 816

Query: 168 YPGPQGI---PGDEGKRGP--------------------------------KGDMGYPGR 192
            PG QGI   PG  G +GP                                KG+ G+PG 
Sbjct: 817 PPGLQGIRGDPGPPGLQGPKGAPGVPGIGPPGVMGPPGGQGPPGSSGPPGVKGEKGFPGF 876

Query: 193 IGLD--GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            GLD  G  G  G  GL G+ G++G+ G+PG+ G PG  G PG  G  G  G  G  G+ 
Sbjct: 877 PGLDMPGPKGDKGTQGLPGLTGQSGLPGLPGQQGTPGLPGFPGPKGEMGVMGTPGQPGSP 936

Query: 251 GKSGINGVPG 260
           G +G+ G+PG
Sbjct: 937 GPAGVPGLPG 946



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 68/152 (44%), Positives = 85/152 (55%), Gaps = 10/152 (6%)

Query: 112 PGLQG--PIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           PG QG   +G+KGE G    +G+ G  GE+GEKG+ G  G  G  G+PG EG +G KG+ 
Sbjct: 309 PGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGSTGFPGDSGYPGLPGREGFKGDKGEA 368

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PGP GI    G  G KG+ G+PG  GL G  G  G PGL G P   G   +PG+ G P
Sbjct: 369 GPPGPPGIVIGTGPLGEKGERGFPGTPGLRGEPGPKGFPGLQGQPVAPGFP-VPGQPGAP 427

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
              G PG  G  G++G  G R   G SG +G+
Sbjct: 428 ---GFPGERGEKGDQGFPG-RSLPGPSGRDGL 455



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 84/203 (41%), Gaps = 66/203 (32%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP GQKGE G+    G     GE+GE G PG   P    G PG +G++G KGD+G+
Sbjct: 1184 PGPSGPAGQKGEPGSDGIPGSA---GEKGEPGLPGRGFP----GFPGTKGEKGSKGDVGF 1236

Query: 169  P---GPQGIPGDEGK-----------------------RGPKGDM--------------- 187
            P   G  GIPG +G+                        GPKGD                
Sbjct: 1237 PGLAGSPGIPGSKGEPGFLGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPM 1296

Query: 188  ---------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                           G PG  G  G  G  G+PG  G+PG  G  GI G  G  G  G+P
Sbjct: 1297 GPPGLPGLDGLKGDKGNPGWPGAPGAPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVP 1356

Query: 233  GTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G  G+ G +G++G  G 
Sbjct: 1357 GFQGQKGLPGLQGVKGDQGDQGF 1379



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 56/115 (48%), Gaps = 14/115 (12%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G +G KGD G  GP G+PG    +  KGD          G  G  GEPG  G+PG  G 
Sbjct: 268 QGPKGEKGDQGVSGPPGVPGQAQVK-EKGD------FATKGEKGQKGEPGFQGMPGV-GE 319

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G PGK   PG  G PG +G  GEKG TG     G SG  G+PG       K E+
Sbjct: 320 KGEPGK---PGPRGKPGKDGEKGEKGSTG---FPGDSGYPGLPGREGFKGDKGEA 368


>gi|296232847|ref|XP_002807839.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-3(V) chain [Callithrix
            jacchus]
          Length = 1720

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 86/172 (50%), Gaps = 27/172 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QGPIG  GE G+ GE G  G  G+ G PG +GP GP G  G  G+ G KGD+G PG +
Sbjct: 1021 GNQGPIGPAGEKGSPGERGPPGATGKDGIPGPLGPLGPSGAAGPSGEEGDKGDVGAPGHK 1080

Query: 173  GIPGDEGKRGPKGDMGYPGRIGL------------DGRDGLPGEPGLDGIPGRNGMDGIP 220
            GI GD      KGD G PG  G+            DG  G  G PGL G  G +G+ G  
Sbjct: 1081 GIKGD------KGDAGPPGPAGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFV 1134

Query: 221  GKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPGTPA 263
            G  G PG  G+PG  G  GE          G  GPRG +G SG  G PG P 
Sbjct: 1135 GVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPSGSEGTPGLPG 1186



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 93/201 (46%), Gaps = 33/201 (16%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEI---------------------------GAKGEMGVK 133
            GF   T    P G+ GP G+ GE+                           GAKGE+G  
Sbjct: 898  GFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGSP 957

Query: 134  GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYP 190
            G  G++G  G  G PGP+G PGD G  G KGD G PGP    G PG+ G  GP G +G P
Sbjct: 958  GPLGKEGPAGPRGFPGPKGAPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPAGGIGLP 1017

Query: 191  GRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G+ G  G  G  GE   PG  G PG  G DGIPG  G  G  G  G +G  G+KG  G  
Sbjct: 1018 GQSGNQGPIGPAGEKGSPGERGPPGATGKDGIPGPLGPLGPSGAAGPSGEEGDKGDVGAP 1077

Query: 248  GNRGKSGINGVPGTPAICAYK 268
            G++G  G  G  G P     +
Sbjct: 1078 GHKGIKGDKGDAGPPGPAGIR 1098



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 85/148 (57%), Gaps = 21/148 (14%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPK 163
           GLQG  G+KGE    G KG++G+KG+RG+ GAPG        GP G +G+ G+EG  G  
Sbjct: 715 GLQGEKGEKGEDGFPGFKGDVGLKGDRGKPGAPGPRGEDGPEGPKGQEGLAGEEGPPGSA 774

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLD---GIPGRNGMD 217
           G+ G  G  G+PG  G+ G KG +G+P   G IG  G+ G  G+PGL+   G PG  G  
Sbjct: 775 GEKGKLGVPGLPGYPGRPGSKGSVGFPGPLGPIGEKGKSGKAGQPGLEGERGPPGSRGER 834

Query: 218 GIPGKDGLP------GKDGIPGTNGTNG 239
           G PG  G P      G+DG+PG NG  G
Sbjct: 835 GQPGATGQPGPKSDVGQDGVPGINGEKG 862



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 83/169 (49%), Gaps = 30/169 (17%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------------------- 156
            G+ G  G +GE+G +G+ G  G  GV+GP   QG  G+                      
Sbjct: 886  GRPGHPGQRGELGFQGQTGPPGPAGVLGP---QGKTGEVGPLGERGPPGPPGPPGEQGLP 942

Query: 157  --EGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
              EG+ G KG++G PGP G  G  G R   GPKG  G PG  GL G  G PG  G +G P
Sbjct: 943  GLEGREGAKGELGSPGPLGKEGPAGPRGFPGPKGAPGDPGPTGLKGDKGPPGPVGANGSP 1002

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G  GLPG+ G  G  G  GEKG  G RG  G +G +G+PG
Sbjct: 1003 GERGPLGPAGGIGLPGQSGNQGPIGPAGEKGSPGERGPPGATGKDGIPG 1051



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 75/146 (51%), Gaps = 15/146 (10%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KG  G +G  G KGE+GE G PG           GD G +G +G  G PGP+G  G EG 
Sbjct: 708 KGTSGNRGLQGEKGEKGEDGFPGFK---------GDVGLKGDRGKPGAPGPRGEDGPEGP 758

Query: 181 RGPK---GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDGIPGT 234
           +G +   G+ G PG  G  G+ G+PG PG  G PG  G  G P   G  G  GK G  G 
Sbjct: 759 KGQEGLAGEEGPPGSAGEKGKLGVPGLPGYPGRPGSKGSVGFPGPLGPIGEKGKSGKAGQ 818

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  GE+G  G RG RG+ G  G PG
Sbjct: 819 PGLEGERGPPGSRGERGQPGATGQPG 844



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 82/176 (46%), Gaps = 30/176 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G+ G  G KG+ G+ GE G  G+ G  G  G  G+PG  G+ G KG +G+PGP
Sbjct: 744 PGAPGPRGEDGPEGPKGQEGLAGEEGPPGSAGEKGKLGVPGLPGYPGRPGSKGSVGFPGP 803

Query: 172 ------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                        G PG EG+RGP G  G  G+ G  G+ G   + G DG+PG NG  G+
Sbjct: 804 LGPIGEKGKSGKAGQPGLEGERGPPGSRGERGQPGATGQPGPKSDVGQDGVPGINGEKGL 863

Query: 220 ------------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                              GKDG PG  G  G  G  G+ G  GP G  G  G  G
Sbjct: 864 PGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTG 919



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 97/253 (38%), Gaps = 81/253 (32%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQ-------------- 151
            PG  GPIG+KG+ G  G+ G++GERG      E+G PG  G PGP+              
Sbjct: 801  PGPLGPIGEKGKSGKAGQPGLEGERGPPGSRGERGQPGATGQPGPKSDVGQDGVPGINGE 860

Query: 152  -------------------------GIPGDEGKR---------GPKGDMGYPGPQGIPGD 177
                                     G PG  G+R         GP G  G  GPQG  G+
Sbjct: 861  KGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGE 920

Query: 178  ------------------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                                    EG+ G KG++G PG +G +G  G  G PG  G PG 
Sbjct: 921  VGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGSPGPLGKEGPAGPRGFPGPKGAPGD 980

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
             G  G+ G  G PG     G NG+ GE+G  GP G  G  G +G  G       K     
Sbjct: 981  PGPTGLKGDKGPPGPV---GANGSPGERGPLGPAGGIGLPGQSGNQGPIGPAGEKGSPGE 1037

Query: 274  LLPNSETSQLLIP 286
              P   T +  IP
Sbjct: 1038 RGPPGATGKDGIP 1050



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 3/95 (3%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G +G  G  G  G KG+ G +G  GV+GPPG QG+PG  G++G  GD+G  GP G PG  
Sbjct: 1111 GAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPR 1170

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G +GP G  G P   GL G  G PG  G  G PG 
Sbjct: 1171 GPQGPSGSEGTP---GLPGGVGQPGAVGEKGEPGE 1202



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP+G  G  G  G  G++G  G  G  G +G PG  G  G  G  GPKGD G+ G  
Sbjct: 490 GPPGPVGLTGRPGPVGPRGLQGPHGPPGRVGKMGRPGADGARGLPGDTGPKGDRGFDGLP 549

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRD---------GLPGEPGLDGIPGRNGMDGIPGKD 223
           G+PG++G+RG  G +G PG  G DG           G  GEPG  G+ G  G  G+ G+ 
Sbjct: 550 GLPGEKGQRGDFGHVGQPGPPGEDGERGPEGPPGPTGQAGEPGPRGLIGPRGSPGVVGRP 609

Query: 224 GLPGKDGIPGTNG 236
           G+ G DG PG  G
Sbjct: 610 GVTGIDGAPGAKG 622



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 71/150 (47%), Gaps = 21/150 (14%)

Query: 111  PPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PG 155
            P G  GP G+   KG++GA G  G+KG++G+       GPPGP GI             G
Sbjct: 1058 PSGAAGPSGEEGDKGDVGAPGHKGIKGDKGD------AGPPGPAGIRGPAGHPGPPGADG 1111

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             +G+RGP G  G  G  G+ G  G  GP G  G PG  G  G  G  G  G  G PG  G
Sbjct: 1112 AQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRG 1171

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              G  G +G PG  G  G  G  GEKG  G
Sbjct: 1172 PQGPSGSEGTPGLPGGVGQPGAVGEKGEPG 1201



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/131 (42%), Positives = 64/131 (48%), Gaps = 15/131 (11%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           GPPGP G+ G  G  GP+G  G  GP       G PG +G RG  GD G  G  G DG  
Sbjct: 490 GPPGPVGLTGRPGPVGPRGLQGPHGPPGRVGKMGRPGADGARGLPGDTGPKGDRGFDGLP 549

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLP---------GKDGIPGTNGTNGEKGMTGPRGNR 250
           GLPGE G  G  G  G  G PG+DG           G+ G PG  G  G +G  G  G  
Sbjct: 550 GLPGEKGQRGDFGHVGQPGPPGEDGERGPEGPPGPTGQAGEPGPRGLIGPRGSPGVVGRP 609

Query: 251 GKSGINGVPGT 261
           G +GI+G PG 
Sbjct: 610 GVTGIDGAPGA 620



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 81/200 (40%), Gaps = 63/200 (31%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDE 157
           G         P GLQGP G  G +G   +MG  G  G +G PG  GP G +G   +PG  
Sbjct: 496 GLTGRPGPVGPRGLQGPHGPPGRVG---KMGRPGADGARGLPGDTGPKGDRGFDGLPGLP 552

Query: 158 GKRGPKGDMGY---PGP------------------QGIPGDEGKRGPKGDMGYPGRIGLD 196
           G++G +GD G+   PGP                   G PG  G  GP+G  G  GR G+ 
Sbjct: 553 GEKGQRGDFGHVGQPGPPGEDGERGPEGPPGPTGQAGEPGPRGLIGPRGSPGVVGRPGVT 612

Query: 197 GRDGLPGEP------------------GLDGIPGRNGMDGIPGK---------------D 223
           G DG PG                    G  GIPG  G+ G PG+               D
Sbjct: 613 GIDGAPGAKGHVGPPGEPGPPGQQGNHGSQGIPGPQGLIGTPGEKGPPGNPGIPGLPGAD 672

Query: 224 GLPGKDGIPGTNGTNGEKGM 243
           G PG    PG  G  GEKG+
Sbjct: 673 GPPGH---PGHEGPTGEKGV 689



 Score = 47.0 bits (110), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 54/112 (48%), Gaps = 24/112 (21%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----- 176
            G  G +GE G KGE G  G PG  GP G +G P   G+ GP+G  G PGP G PG     
Sbjct: 1312 GREGREGEKGAKGEPGPDGTPGRTGPMGARGPP---GRVGPEGLRGIPGPVGEPGLLGSP 1368

Query: 177  ----------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                             +G  GPKG+ G+ G IGL G  G  GE G  G+PG
Sbjct: 1369 GLMGPPGPLGPSGLPGLKGDAGPKGEKGHIGLIGLIGPSGEAGEKGDQGLPG 1420



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 78/210 (37%), Gaps = 66/210 (31%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------------KGDMGYP 169
           G  GE G +G  G +G+PGVVG PG  GI G  G +G                 G  G P
Sbjct: 586 GQAGEPGPRGLIGPRGSPGVVGRPGVTGIDGAPGAKGHVGPPGEPGPPGQQGNHGSQGIP 645

Query: 170 GPQGI---------------------------PGDEGKRGPK------------------ 184
           GPQG+                           PG EG  G K                  
Sbjct: 646 GPQGLIGTPGEKGPPGNPGIPGLPGADGPPGHPGHEGPTGEKGVQGPPGSAGPPGYPGPR 705

Query: 185 ------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                 G+ G  G  G  G DG PG  G  G+ G  G  G PG  G  G +G  G  G  
Sbjct: 706 GVKGTSGNRGLQGEKGEKGEDGFPGFKGDVGLKGDRGKPGAPGPRGEDGPEGPKGQEGLA 765

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           GE+G  G  G +GK G+ G+PG P     K
Sbjct: 766 GEEGPPGSAGEKGKLGVPGLPGYPGRPGSK 795



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 82/202 (40%), Gaps = 45/202 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G KG +G  G +G  GE+G+ G  G  G  G +G PG  G+RG  G  G PGP
Sbjct: 786 PGYPGRPGSKGSVGFPGPLGPIGEKGKSGKAGQPGLEGERGPPGSRGERGQPGATGQPGP 845

Query: 172 Q------GIPGDEGKRG---------------------PKGDMGYPGRIGLDGRDGLPGE 204
           +      G+PG  G++G                       G  G+PG+ G  G  G  G 
Sbjct: 846 KSDVGQDGVPGINGEKGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGELGFQGQTGP 905

Query: 205 PGLDGIPGRNGMDG------------------IPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
           PG  G+ G  G  G                    G  GL G++G  G  G+ G  G  GP
Sbjct: 906 PGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGSPGPLGKEGP 965

Query: 247 RGNRGKSGINGVPGTPAICAYK 268
            G RG  G  G PG P     K
Sbjct: 966 AGPRGFPGPKGAPGDPGPTGLK 987


>gi|449478282|ref|XP_004174402.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(V) chain
           [Taeniopygia guttata]
          Length = 1797

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 78/148 (52%), Gaps = 15/148 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G     GI GD G+ GP G  G  GP+G    +
Sbjct: 764 GVKGADGVRGLKGTKGEKGEDGFPGFKGD---MGIKGDRGEIGPPGPRGEDGPEGP---K 817

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIP 232
           G+ GP GD   PG +G  G  G  G PGL G PGR       G  G PG +G  G  G P
Sbjct: 818 GRSGPNGD---PGPLGPAGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGTRGTP 874

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G++G TGPRG RG  G  G PG
Sbjct: 875 GKPGPRGQRGPTGPRGERGPRGSTGKPG 902



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 71/146 (48%), Gaps = 25/146 (17%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG PG   K GP G  G PGP G             
Sbjct: 1375 QGEKGAKGEAGLEGPPGKTGPIGPQGAPG---KPGPDGLRGIPGPVGEQGLPGSPGPDGP 1431

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G+   
Sbjct: 1432 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEHGEKGDRGLPGPQGSAGPKGEQ-F 1490

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRG 251
                G PG  G  G  G TGP+G  G
Sbjct: 1491 VSPQGPPGPKGAKGSSGPTGPKGESG 1516



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 92/218 (42%), Gaps = 75/218 (34%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQG---------------IPGDEGKRGPKGDM------- 166
           E G +G+ GE G  G+ G PGP+G               + G +G+ GPKG++       
Sbjct: 639 EDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVAGMDGQTGPKGNVVSPPYKF 698

Query: 167 --GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR----------- 213
             G PGPQG  G  G++GP   +G PG  G+ G DG PG PG +G PG            
Sbjct: 699 SQGLPGPQGAIGPPGEKGP---LGKPGLPGMPGADGPPGHPGKEGPPGEKGSQGPPGPQG 755

Query: 214 ----------NGMDGI---------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGN----- 249
                      G DG+          G+DG PG  G  G  G  GE G  GPRG      
Sbjct: 756 PIGYPGPRGVKGADGVRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEG 815

Query: 250 -RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
            +G+SG NG PG             L P  E  +L +P
Sbjct: 816 PKGRSGPNGDPG------------PLGPAGEKGKLGVP 841



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 12/94 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           G +GP G+ G  G  G +G  GE+G+ G PG+ G PG QG          PG  G++G +
Sbjct: 812 GPEGPKGRSGPNGDPGPLGPAGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGTR 871

Query: 164 GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIG 194
           G  G PGP+G     G  G+RGP+G  G PG  G
Sbjct: 872 GTPGKPGPRGQRGPTGPRGERGPRGSTGKPGPKG 905



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 847 PGRQGP---KGSIGFPGFPGANGEKGTRGTPGKPGPRGQRGPTGPRGERGPRGSTGKPGP 903

Query: 172 QG 173
           +G
Sbjct: 904 KG 905



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 63/143 (44%), Gaps = 32/143 (22%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG                   
Sbjct: 1375 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1434

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL-----P 202
                     +G  GPKG+ G+PG  G+ G  G+ G KGD G PG  G  G  G       
Sbjct: 1435 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEHGEKGDRGLPGPQGSAGPKGEQFVSPQ 1494

Query: 203  GEPGLDGIPGRNGMDGIPGKDGL 225
            G PG  G  G +G  G  G+ GL
Sbjct: 1495 GPPGPKGAKGSSGPTGPKGESGL 1517



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 34/61 (55%), Gaps = 5/61 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-----GPPGPQGIPGDEGKRGPKGDM 166
            PGL G IG  GE G KG+ G+ G +G  G  G       GPPGP+G  G  G  GPKG+ 
Sbjct: 1456 PGLIGLIGPPGEHGEKGDRGLPGPQGSAGPKGEQFVSPQGPPGPKGAKGSSGPTGPKGES 1515

Query: 167  G 167
            G
Sbjct: 1516 G 1516


>gi|449275136|gb|EMC84098.1| Collagen alpha-1(IV) chain, partial [Columba livia]
          Length = 1630

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 86/163 (52%), Gaps = 16/163 (9%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
            QKG +G   EMG+ G  GEKG PGV G PG  G PG +G++G KG  G+PG  G PG  G
Sbjct: 968  QKGSVG---EMGLPGTPGEKGLPGVPGSPGTPGFPGQKGEKGDKGAPGFPG-IGFPGSPG 1023

Query: 180  KRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGRNGMDGIPGK------DGLPG 227
            ++G  G  G PG  G  G        G+PG PG  G PG  G  G PG+       GLPG
Sbjct: 1024 EKGEPGRTGSPGLAGDKGEKGSAGIPGMPGAPGPKGSPGMAGFPGSPGRHGEKGEKGLPG 1083

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
              GIPG  G  GE G+ GP G+ G+ G  G  G P     K E
Sbjct: 1084 LSGIPGLKGEPGEPGIPGPAGSIGQKGEPGYDGIPGAAGAKGE 1126



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 93/186 (50%), Gaps = 20/186 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  G  G+KGE G  G  G+ G++GEKG+          GIPG  G  GPKG    PG  
Sbjct: 1017 GFPGSPGEKGEPGRTGSPGLAGDKGEKGS---------AGIPGMPGAPGPKGS---PGMA 1064

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G PG  G+ G KG+ G PG  G+ G  G PGEPG+ G  G  G  G PG DG+PG  G  
Sbjct: 1065 GFPGSPGRHGEKGEKGLPGLSGIPGLKGEPGEPGIPGPAGSIGQKGEPGYDGIPGAAGAK 1124

Query: 233  GTNGTNGEK-----GMTGPRGNRGKSGINGVPGTPAICAYKRESC-SLLPNSETSQLLIP 286
            G  G  G       G  G +G +G+ G  G PG+P I   K E   +  P  + SQ L  
Sbjct: 1125 GEQGLPGRGLPGFPGAKGDKGVKGEVGFPGSPGSPGIPGLKGEPGYAGPPGPKGSQGL-- 1182

Query: 287  PTIVGS 292
            P + GS
Sbjct: 1183 PGLPGS 1188



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 96/195 (49%), Gaps = 45/195 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGY 168
            PGL GP   +G++G KG  G KGE G  G PG+ G PGP   +G+PG++G +G KG +  
Sbjct: 819  PGLPGP---QGDVGLKGSAGAKGEMGVMGTPGLPGTPGPVGDRGLPGEKGSQGFKGVV-- 873

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIG---------LDGRDGLPGEPGLDGIPGRNGMDGI 219
             GPQ   GD G +G KG+ G PG+ G         L G+ G  GE G  G  G  G+ G 
Sbjct: 874  -GPQ---GDPGVKGDKGEAGLPGKPGTMDNMDMVSLKGQKGDQGEKGDHGATGEKGLQGE 929

Query: 220  PGKDGLPGKDGIPGT------------------------NGTNGEKGMTGPRGNRGKSGI 255
             G  G+PGKDG PGT                         G+ GE G+ G  G +G  G+
Sbjct: 930  YGDPGIPGKDGEPGTPGHPGPKGDQGPPGYPGDPGLPGQKGSVGEMGLPGTPGEKGLPGV 989

Query: 256  NGVPGTPAICAYKRE 270
             G PGTP     K E
Sbjct: 990  PGSPGTPGFPGQKGE 1004



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 92/194 (47%), Gaps = 43/194 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEK------GAPGVVGPPGPQ--------------- 151
            G +G  G+KG+ GA GE G++GE G+       G PG  G PGP+               
Sbjct: 907  GQKGDQGEKGDHGATGEKGLQGEYGDPGIPGKDGEPGTPGHPGPKGDQGPPGYPGDPGLP 966

Query: 152  ---------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                     G+PG  G++G  G  G PG  G PG +G++G KG  G+PG IG  G  G  
Sbjct: 967  GQKGSVGEMGLPGTPGEKGLPGVPGSPGTPGFPGQKGEKGDKGAPGFPG-IGFPGSPGEK 1025

Query: 203  GEPGLDGIPGRN------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            GEPG  G PG              GM G PG  G PG  G PG+ G +GEKG  G  G  
Sbjct: 1026 GEPGRTGSPGLAGDKGEKGSAGIPGMPGAPGPKGSPGMAGFPGSPGRHGEKGEKGLPGLS 1085

Query: 251  GKSGINGVPGTPAI 264
            G  G+ G PG P I
Sbjct: 1086 GIPGLKGEPGEPGI 1099



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 81/155 (52%), Gaps = 28/155 (18%)

Query: 119 GQKGEIGAKGEMGV--------KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           G+KG+ G KGE G         KGE+GE G       PGP+G PG +G  GPKG+ G PG
Sbjct: 211 GEKGDPGEKGERGTPGFPGSGFKGEKGEPGK------PGPRGKPGKDGDPGPKGEAGLPG 264

Query: 171 PQGIPGDEGKRGPKGDMGY------PGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             GIPG  G+ G KGD G       PGR    G  G  G PG  GL G+ G+ G  G PG
Sbjct: 265 GFGIPGRPGEPGAKGDKGERGFPGPPGRFIDPGPVGEKGEPGASGLPGLKGQKGEKGFPG 324

Query: 222 KDGLPGKDGIP-----GTNGTNGEKGMTGPRGNRG 251
             G+PG  G P     G+ G  GE+G  G +G+ G
Sbjct: 325 IQGIPGPPGRPLPDRVGSPGVPGERGEKGEKGSPG 359



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 91/197 (46%), Gaps = 46/197 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------VVGPPGPQGIPGDEGK 159
            PG +G  G KG +G +G+ GVKG++GE G PG            + G  G QG  GD G 
Sbjct: 861  PGEKGSQGFKGVVGPQGDPGVKGDKGEAGLPGKPGTMDNMDMVSLKGQKGDQGEKGDHGA 920

Query: 160  RGPKG------DMGYPGPQGIPGDEGKRGPKGD---------------------MGYPGR 192
             G KG      D G PG  G PG  G  GPKGD                     MG PG 
Sbjct: 921  TGEKGLQGEYGDPGIPGKDGEPGTPGHPGPKGDQGPPGYPGDPGLPGQKGSVGEMGLPGT 980

Query: 193  IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------ 246
             G  G  G+PG PG  G PG+ G  G  G  G PG  G PG+ G  GE G TG       
Sbjct: 981  PGEKGLPGVPGSPGTPGFPGQKGEKGDKGAPGFPGI-GFPGSPGEKGEPGRTGSPGLAGD 1039

Query: 247  RGNRGKSGINGVPGTPA 263
            +G +G +GI G+PG P 
Sbjct: 1040 KGEKGSAGIPGMPGAPG 1056



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 99/254 (38%), Gaps = 92/254 (36%)

Query: 113 GLQGPIGQKGEIGA---------------------KGEMGVKGERGEKGAPGVVGP---- 147
           G QGP G+KGE G                      KGE G  GE+GE+G PG  G     
Sbjct: 175 GFQGPKGEKGEQGVRGPPGPPGPSPHMKEKGSEIIKGEKGDPGEKGERGTPGFPGSGFKG 234

Query: 148 -------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRI- 193
                  PGP+G PG +G  GPKG+ G PG  GIPG  G+ G KGD G       PGR  
Sbjct: 235 EKGEPGKPGPRGKPGKDGDPGPKGEAGLPGGFGIPGRPGEPGAKGDKGERGFPGPPGRFI 294

Query: 194 --GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG-----------KDGIPGTNGTNGE 240
             G  G  G PG  GL G+ G+ G  G PG  G+PG             G+PG  G  GE
Sbjct: 295 DPGPVGEKGEPGASGLPGLKGQKGEKGFPGIQGIPGPPGRPLPDRVGSPGVPGERGEKGE 354

Query: 241 KG-----MTGPRG-----------------------------------NRGKSGINGVPG 260
           KG     + GP G                                     G  G +G PG
Sbjct: 355 KGSPGFALPGPPGRDGFPGPPGLPGPPGPPGKTDGIDQCQQGEPGAPGTPGLPGRDGFPG 414

Query: 261 TPAICAYKRESCSL 274
                  K ESC+L
Sbjct: 415 EMGEKGDKGESCAL 428



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 90/210 (42%), Gaps = 58/210 (27%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------P 148
             M GF  S   +         G+KGE G  G  G+ G +GE G PG+ GP         P
Sbjct: 1062 GMAGFPGSPGRH---------GEKGEKGLPGLSGIPGLKGEPGEPGIPGPAGSIGQKGEP 1112

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQ--GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            G  GIPG  G    KG+ G PG    G PG +G +G KG++G+PG  G  G  GL GEPG
Sbjct: 1113 GYDGIPGAAGA---KGEQGLPGRGLPGFPGAKGDKGVKGEVGFPGSPGSPGIPGLKGEPG 1169

Query: 207  LDGIPGRNGMDGIPGKDGLPGK--------------------------------DGIPGT 234
              G PG  G  G+P   GLPG                                  G  G 
Sbjct: 1170 YAGPPGPKGSQGLP---GLPGSAMEGPKGDRGPQGQPGLPGLPGPTGPPGPPGVKGAKGE 1226

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G+NG  G  G  G +G  G  G+PG+P +
Sbjct: 1227 QGSNGWPGTPGSPGVKGDPGFQGLPGSPGL 1256



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 76/151 (50%), Gaps = 15/151 (9%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G KG+ G +G+ G  G+ G+ G PGPQG  G +G  G KG+MG     G PG  G  GP 
Sbjct: 799 GPKGDKGSQGQPGVPGSVGLPGLPGPQGDVGLKGSAGAKGEMGV---MGTPGLPGTPGPV 855

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------------PGKDGIP 232
           GD G PG  G  G  G+ G  G  G+ G  G  G+PGK G              G  G  
Sbjct: 856 GDRGLPGEKGSQGFKGVVGPQGDPGVKGDKGEAGLPGKPGTMDNMDMVSLKGQKGDQGEK 915

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G +G  GEKG+ G  G+ G  G +G PGTP 
Sbjct: 916 GDHGATGEKGLQGEYGDPGIPGKDGEPGTPG 946



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 74/155 (47%), Gaps = 22/155 (14%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            P     GF     E   PG +G  G+ G+ G KGE G+         PG  G P   G 
Sbjct: 224 TPGFPGSGFKGEKGEPGKPGPRGKPGKDGDPGPKGEAGL---------PGGFGIP---GR 271

Query: 154 PGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           PG+ G +G KG+ G+PGP G    PG  G++G  G  G PG  G  G  G PG  G+ G 
Sbjct: 272 PGEPGAKGDKGERGFPGPPGRFIDPGPVGEKGEPGASGLPGLKGQKGEKGFPGIQGIPGP 331

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           PGR     +P + G P   G+PG  G  GEKG  G
Sbjct: 332 PGRP----LPDRVGSP---GVPGERGEKGEKGSPG 359



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 4/109 (3%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G+PG   IPG +   GPKGD G  G+ G+ G  GLPG PG  G  G  G  G  G+
Sbjct: 784 KGERGFPG---IPGLD-MPGPKGDKGSQGQPGVPGSVGLPGLPGPQGDVGLKGSAGAKGE 839

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G+ G  G+PGT G  G++G+ G +G++G  G+ G  G P +   K E+
Sbjct: 840 MGVMGTPGLPGTPGPVGDRGLPGEKGSQGFKGVVGPQGDPGVKGDKGEA 888



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 80/188 (42%), Gaps = 42/188 (22%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L  + G      E   PG+ GP   IGQKGE G  G  G  G +GE+G PG   P    G
Sbjct: 1081 LPGLSGIPGLKGEPGEPGIPGPAGSIGQKGEPGYDGIPGAAGAKGEQGLPGRGLP----G 1136

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------- 205
             PG +G +G KG++G+PG  G PG  G +G  G  G PG  G  G  GLPG         
Sbjct: 1137 FPGAKGDKGVKGEVGFPGSPGSPGIPGLKGEPGYAGPPGPKGSQGLPGLPGSAMEGPKGD 1196

Query: 206  -------------------------GLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGT 237
                                     G  G  G NG  G PG  G+   PG  G+PG+ G 
Sbjct: 1197 RGPQGQPGLPGLPGPTGPPGPPGVKGAKGEQGSNGWPGTPGSPGVKGDPGFQGLPGSPGL 1256

Query: 238  NGEKGMTG 245
             G+ G  G
Sbjct: 1257 PGDIGQKG 1264



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 89/227 (39%), Gaps = 93/227 (40%)

Query: 122 GEIGAKGEMG-------VKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKG------- 164
           G  GAKGE G       +KGE+G+ G PG  G PG +G PG +G    +GPKG       
Sbjct: 481 GSPGAKGEPGDFSYDSILKGEKGDPGFPGQPGTPGREGRPGKDGLPGLQGPKGASGTAGL 540

Query: 165 -----------------DMGYPGPQGI-----PGDEGKRGPKGDMGYPGRIGLDGRDG-- 200
                            + G+PGP GI     PGD+G RG  G  G PG  G  G  G  
Sbjct: 541 KGERGPPGQPGFPGVRGERGFPGPPGIGTAGLPGDKGDRGFAGTPGLPGLPGAKGEAGRT 600

Query: 201 --LPGEPGLD---------------GIPGRNGMDGIPGKDGL------------------ 225
             LPG PG D               G PG  G  G+PG+ G                   
Sbjct: 601 VPLPGPPGADGLPGPPGFPGPQGDKGYPGLPGRPGVPGEKGAVGQPGIGFPGPPGPKGFQ 660

Query: 226 --PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             PG  G+PGT GT                G++G+PG P +   K E
Sbjct: 661 GQPGSPGLPGTPGT---------------PGLDGLPGVPGLQGQKGE 692



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 64/126 (50%), Gaps = 18/126 (14%)

Query: 166 MGYPGPQGIPGDEG----KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           MG PG +G PGD       +G KGD G+PG+ G  GR+G PG+   DG+PG  G  G  G
Sbjct: 480 MGSPGAKGEPGDFSYDSILKGEKGDPGFPGQPGTPGREGRPGK---DGLPGLQGPKGASG 536

Query: 222 KDGLPGK---DGIPGTNGTNGEKGMTGP--------RGNRGKSGINGVPGTPAICAYKRE 270
             GL G+    G PG  G  GE+G  GP         G++G  G  G PG P +   K E
Sbjct: 537 TAGLKGERGPPGQPGFPGVRGERGFPGPPGIGTAGLPGDKGDRGFAGTPGLPGLPGAKGE 596

Query: 271 SCSLLP 276
           +   +P
Sbjct: 597 AGRTVP 602



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 84/200 (42%), Gaps = 51/200 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGK--RGPKGDM 166
            PG +G  G KGE+G  G  G  G  G KG PG  GPPGP   QG+PG  G    GPKGD 
Sbjct: 1138 PGAKGDKGVKGEVGFPGSPGSPGIPGLKGEPGYAGPPGPKGSQGLPGLPGSAMEGPKGDR 1197

Query: 167  GYPGP------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  G                   +G  G++G  G  G  G PG  G  G  GLPG PGL 
Sbjct: 1198 GPQGQPGLPGLPGPTGPPGPPGVKGAKGEQGSNGWPGTPGSPGVKGDPGFQGLPGSPGLP 1257

Query: 209  GIPGRNG---------------MDGIPGKDGLPGKDGIPGTNG-------------TNGE 240
            G  G+ G                 G PG  G  G  G+PG+ G               G+
Sbjct: 1258 GDIGQKGDLGPPGVPGVPGPKGSPGFPGLKGERGDQGLPGSKGLQGPPGPPGAFQLVKGD 1317

Query: 241  KGMTGPRGNRGKSGINGVPG 260
             G+ GP G  G  G  G+PG
Sbjct: 1318 PGLPGPVGPVGLKGFPGLPG 1337



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 84/232 (36%), Gaps = 105/232 (45%)

Query: 112 PGLQGPIGQKGEIGAKGE---------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG- 161
           PGLQGP G  G  G KGE          GV+GERG  G PG+    G  G+PGD+G RG 
Sbjct: 526 PGLQGPKGASGTAGLKGERGPPGQPGFPGVRGERGFPGPPGI----GTAGLPGDKGDRGF 581

Query: 162 ------------------------PKG---------------DMGYPGPQGIPGDEGKRG 182
                                   P G               D GYP             
Sbjct: 582 AGTPGLPGLPGAKGEAGRTVPLPGPPGADGLPGPPGFPGPQGDKGYP------------- 628

Query: 183 PKGDMGYPGRIGLDGRDGL--------------------PGEPGLDGIPGRNGMDGIPGK 222
                G PGR G+ G  G                     PG PGL G PG  G+DG+PG 
Sbjct: 629 -----GLPGRPGVPGEKGAVGQPGIGFPGPPGPKGFQGQPGSPGLPGTPGTPGLDGLPGV 683

Query: 223 DGLPGKDGIPGT--------------NGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL G+ G PG                G  GEKG  G  G RG+ G  G+PG
Sbjct: 684 PGLQGQKGEPGVGLPGPKGLPGPPGPAGIPGEKGSPGLPGLRGEQGFPGIPG 735


>gi|268577295|ref|XP_002643629.1| C. briggsae CBR-LET-2 protein [Caenorhabditis briggsae]
          Length = 1758

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 91/168 (54%), Gaps = 25/168 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G KG++G  G  G  G++GE G  GV G PG  G PG       KGD G PG 
Sbjct: 790 PGLPGIPGPKGDVGNPGMPGFNGQKGEPGV-GVPGQPGAPGFPGL------KGDAGLPGL 842

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------EPGLDGIPGRNGMDGI 219
            G PG EG+RG      +PG  GL G +GLPG            + GL G+PGR G  G 
Sbjct: 843 PGAPGLEGQRG------FPGAPGLKGENGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGF 896

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           PG+DGLPG  G  G +G  G  G+TG +G+ G +G++G PG P    Y
Sbjct: 897 PGQDGLPGVPGQKGEDGLPGLPGVTGLKGDAGAAGLSGAPGLPGAPGY 944



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/171 (43%), Positives = 92/171 (53%), Gaps = 22/171 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG------ERGEK---GAPGVVGPPGPQGIPGDEGKRGPK 163
            G+ GP G +G  G  GE G  G      ++GE    G PG+ GP GP G+PG  G    K
Sbjct: 1006 GIPGPKGDRGFNGLPGEKGEAGPAARDGQKGEAGLPGQPGLRGPAGPSGLPGVPGI---K 1062

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIP 220
            GD G PG        G+ G  G+ G PG  G  GR G PG PG DG+PG  GM    G P
Sbjct: 1063 GDAGLPG-------YGQPGLPGEKGLPGIPGKAGRQGAPGSPGQDGLPGFPGMKGEAGYP 1115

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G+DGLPG+DG+PG  G  G+ G +G  G  G  G++G PG P I   K +S
Sbjct: 1116 GQDGLPGRDGLPGVPGMKGDLGDSGQPGLPGAPGLDGQPGVPGIRGDKGQS 1166



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 83/165 (50%), Gaps = 12/165 (7%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQ G  G KG  G+ G+ G +GAPG  G  G  G PG +G+ G  G  G PG  G+PG  
Sbjct: 1071 GQPGLPGEKGLPGIPGKAGRQGAPGSPGQDGLPGFPGMKGEAGYPGQDGLPGRDGLPGVP 1130

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEP---------GLDGIPGRNGMDGIPGKDGLPGKD 229
            G +G  GD G PG  G  G DG PG P         GL GIPG  GMDG PG+ G  G  
Sbjct: 1131 GMKGDLGDSGQPGLPGAPGLDGQPGVPGIRGDKGQSGLPGIPGDRGMDGFPGQKGENGYP 1190

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT---PAICAYKRES 271
            G PG  G  GEKG  G  G  G  G  G PG    P I   K ES
Sbjct: 1191 GQPGLPGLAGEKGFAGTPGFPGLKGAPGYPGQDGLPGIPGLKGES 1235



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 86/165 (52%), Gaps = 15/165 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G  G  G  G++G+RG  GAPG+ G  G  G+ G  G  G KGD G PG 
Sbjct: 828 PGFPGLKGDAGLPGLPGAPGLEGQRGFPGAPGLKGENGLPGLSGQPGYPGEKGDAGLPG- 886

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             +PG EG  G  G  G PG  G  G DGLPG PG+ G+ G  G  G+ G  GLPG  G 
Sbjct: 887 --VPGREGSPGFPGQDGLPGVPGQKGEDGLPGLPGVTGLKGDAGAAGLSGAPGLPGAPGY 944

Query: 232 PGTNGTNGEKGMTGPRGN------------RGKSGINGVPGTPAI 264
           PG  G  G  G+ G +G+            +G+ G+ G+PGTP +
Sbjct: 945 PGMKGNAGIPGVPGFKGDAGLSGLPGLNGPKGEPGVPGMPGTPGM 989



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 93/211 (44%), Gaps = 62/211 (29%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVG------------P--PGPQGIPGDEGKRGPKG 164
            GQKGE G  G+ G++G  G  G PGV G            P  PG +G+PG  GK G +G
Sbjct: 1033 GQKGEAGLPGQPGLRGPAGPSGLPGVPGIKGDAGLPGYGQPGLPGEKGLPGIPGKAGRQG 1092

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL----------------- 207
              G PG  G+PG  G    KG+ GYPG+ GL GRDGLPG PG+                 
Sbjct: 1093 APGSPGQDGLPGFPGM---KGEAGYPGQDGLPGRDGLPGVPGMKGDLGDSGQPGLPGAPG 1149

Query: 208  ----------------------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
                                        DG PG+ G +G PG+ GLPG  G  G  GT G
Sbjct: 1150 LDGQPGVPGIRGDKGQSGLPGIPGDRGMDGFPGQKGENGYPGQPGLPGLAGEKGFAGTPG 1209

Query: 240  EKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
              G+ G  G  G+ G+ G+PG      Y  +
Sbjct: 1210 FPGLKGAPGYPGQDGLPGIPGLKGESGYPGQ 1240



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 98/222 (44%), Gaps = 45/222 (20%)

Query: 89   NAYSRIP----LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG- 143
            N Y   P    L   +GF   T  +  PGL+G  G  G+ G  G  G+KGE G  G PG 
Sbjct: 1187 NGYPGQPGLPGLAGEKGFAG-TPGF--PGLKGAPGYPGQDGLPGIPGLKGESGYPGQPGQ 1243

Query: 144  -------------------------VVGPPGPQGIPGDEGK---------RGPKGDMGYP 169
                                     + GP GP G PG +GK         +G  G  G P
Sbjct: 1244 EGLPGLSGEKGMGGLPGLPGQPGQSIPGPVGPSGAPGLQGKDGFPGLPGQKGESGLNGLP 1303

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G  G+ GD G  G  G  G PG  G+ G+   DGLPG PG DG PG  G+ G  G  GLP
Sbjct: 1304 GAPGLKGDAGLPGFPGAKGDPGANGIPGKRGDDGLPGVPGRDGQPGAPGLKGEIGGAGLP 1363

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G+ G PG  G  GE G+ G  G +G+ G  G PG P     K
Sbjct: 1364 GQPGFPGLPGIKGEGGLPGFPGAKGEPGFPGSPGAPGYAGEK 1405



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 89/173 (51%), Gaps = 33/173 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  GQKGE G  G  GV G +G+ GA G+ G PG   +PG  G  G KG+ G PG  
Sbjct: 901  GLPGVPGQKGEDGLPGLPGVTGLKGDAGAAGLSGAPG---LPGAPGYPGMKGNAGIPG-- 955

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------------RNGMDGIP 220
             +PG       KGD G  G  GL+G  G PG PG+ G PG            R+G+ GIP
Sbjct: 956  -VPGF------KGDAGLSGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLAGIP 1008

Query: 221  GKDGLPGKDGIPGT---------NGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  G +G+PG          +G  GE G+ G  G RG +G +G+PG P I
Sbjct: 1009 GPKGDRGFNGLPGEKGEAGPAARDGQKGEAGLPGQPGLRGPAGPSGLPGVPGI 1061



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 71/134 (52%), Gaps = 26/134 (19%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           GAPGV GPPG  G+       GPKG+ GY   +G PG                 GL G+D
Sbjct: 428 GAPGVSGPPGMPGL------SGPKGEPGY---RGTPGQS-------------IPGLPGKD 465

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
              G+PGLDG PGR G +G+PG  G PG D + G  G  G +G  GP+G  G+ G+NG+P
Sbjct: 466 ---GKPGLDGAPGRKGENGLPGVRGPPG-DSLNGLPGAPGPRGAPGPKGYDGRDGVNGLP 521

Query: 260 GTPAICAYKRESCS 273
           G P     +  +CS
Sbjct: 522 GAPGSKGDRGGTCS 535



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 92/206 (44%), Gaps = 35/206 (16%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             M GF     E   PG  G  G  GE G  G  G  G +G  G PG  G PG  G+ G+ 
Sbjct: 1176 GMDGFPGQKGENGYPGQPGLPGLAGEKGFAGTPGFPGLKGAPGYPGQDGLPGIPGLKGES 1235

Query: 158  GKRGPKGDMGYP--------------------------GPQGIPGDEGKRGPKGDMGYPG 191
            G  G  G  G P                          GP G PG +GK    G  G PG
Sbjct: 1236 GYPGQPGQEGLPGLSGEKGMGGLPGLPGQPGQSIPGPVGPSGAPGLQGK---DGFPGLPG 1292

Query: 192  RIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKDGLPGK---DGIPGTNGTNGEKGMTG 245
            + G  G +GLPG PGL    G+PG  G  G PG +G+PGK   DG+PG  G +G+ G  G
Sbjct: 1293 QKGESGLNGLPGAPGLKGDAGLPGFPGAKGDPGANGIPGKRGDDGLPGVPGRDGQPGAPG 1352

Query: 246  PRGNRGKSGINGVPGTPAICAYKRES 271
             +G  G +G+ G PG P +   K E 
Sbjct: 1353 LKGEIGGAGLPGQPGFPGLPGIKGEG 1378



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 77/143 (53%), Gaps = 12/143 (8%)

Query: 112  PGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PG++G  G  G+ G  G        G+KG+ G+ G PG+ G PG  G PG  G RG KG 
Sbjct: 1106 PGMKGEAGYPGQDGLPGRDGLPGVPGMKGDLGDSGQPGLPGAPGLDGQPGVPGIRGDKGQ 1165

Query: 166  MGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G PG   IPGD G     G KG+ GYPG+ GL G  G  G  G  G PG  G  G PG+
Sbjct: 1166 SGLPG---IPGDRGMDGFPGQKGENGYPGQPGLPGLAGEKGFAGTPGFPGLKGAPGYPGQ 1222

Query: 223  DGLPGKDGIPGTNGTNGEKGMTG 245
            DGLPG  G+ G +G  G+ G  G
Sbjct: 1223 DGLPGIPGLKGESGYPGQPGQEG 1245



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 84/163 (51%), Gaps = 21/163 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  GQ G  G KG+ G+ G  G +G+PG    PG  G+PG  G++G  G  G PG  
Sbjct: 865  GLPGLSGQPGYPGEKGDAGLPGVPGREGSPGF---PGQDGLPGVPGQKGEDGLPGLPGVT 921

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+ GD G  G  G  G PG  G  G  G  G PG+ G  G  G+ G+PG +G  G+ G+P
Sbjct: 922  GLKGDAGAAGLSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDAGLSGLPGLNGPKGEPGVP 981

Query: 233  GTNGTNGEK---------------GMTGPRGNRGKSGINGVPG 260
            G  GT G K               G+ GP+G+R   G NG+PG
Sbjct: 982  GMPGTPGMKGNGGLPGLPGRDGLAGIPGPKGDR---GFNGLPG 1021



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 87/181 (48%), Gaps = 31/181 (17%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------KRGPKGDMGYP 169
           G+ G  G  G KGE G  G PG VG PG  G+PG +G              G  GD G+ 
Sbjct: 728 GQPGLPGLPGTKGESGFPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGF- 786

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD-----GLPGEPGLDGIPGRNGMDGIPGKDG 224
              G+PG  G  GPKGD+G PG  G +G+      G+PG+PG  G PG  G  G+PG  G
Sbjct: 787 --GGVPGLPGIPGPKGDVGNPGMPGFNGQKGEPGVGVPGQPGAPGFPGLKGDAGLPGLPG 844

Query: 225 LPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
            PG +      G PG  G NG  G++G  G  G+ G  G+PG P      RE     P  
Sbjct: 845 APGLEGQRGFPGAPGLKGENGLPGLSGQPGYPGEKGDAGLPGVPG-----REGSPGFPGQ 899

Query: 279 E 279
           +
Sbjct: 900 D 900



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 92/194 (47%), Gaps = 41/194 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGP 162
            PGL G  G KG+ GA G  G  G  G  G PG+ G  G  G+PG +G           GP
Sbjct: 915  PGLPGVTGLKGDAGAAGLSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDAGLSGLPGLNGP 974

Query: 163  KGDMGYPGPQGIPGDE---------------GKRGPKGDMGY---PG---------RIGL 195
            KG+ G PG  G PG +               G  GPKGD G+   PG         R G 
Sbjct: 975  KGEPGVPGMPGTPGMKGNGGLPGLPGRDGLAGIPGPKGDRGFNGLPGEKGEAGPAARDGQ 1034

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLP--GKDGIPGTNGTNGEKGMTGPRGNR 250
             G  GLPG+PGL G  G +G+ G+P   G  GLP  G+ G+PG  G  G  G  G +G  
Sbjct: 1035 KGEAGLPGQPGLRGPAGPSGLPGVPGIKGDAGLPGYGQPGLPGEKGLPGIPGKAGRQGAP 1094

Query: 251  GKSGINGVPGTPAI 264
            G  G +G+PG P +
Sbjct: 1095 GSPGQDGLPGFPGM 1108



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 86/183 (46%), Gaps = 35/183 (19%)

Query: 113 GLQGPIGQKGEIG--AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           GL G  G KGE G    G+ G  G +GE G PG+ G PG QG+PG+        +   P 
Sbjct: 670 GLPGLPGNKGEAGYGQPGQPGFPGTKGEAGLPGLPGTPGLQGLPGEPAPE----NQVNPA 725

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---------------------DG 209
           P G PG  G  G KG+ G+PGR G  G+ G PG PG+                      G
Sbjct: 726 PPGQPGLPGLPGTKGESGFPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKG 785

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR--------GNRGKSGINGVPGT 261
             G  G+ GIPG  G  G  G+PG NG  GE G+  P         G +G +G+ G+PG 
Sbjct: 786 FGGVPGLPGIPGPKGDVGNPGMPGFNGQKGEPGVGVPGQPGAPGFPGLKGDAGLPGLPGA 845

Query: 262 PAI 264
           P +
Sbjct: 846 PGL 848



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 76/152 (50%), Gaps = 12/152 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G  G  G KGE G +G  G+     + G PG  G PG +G  G KG+ G PG 
Sbjct: 430 PGVSGPPGMPGLSGPKGEPGYRGTPGQS----IPGLPGKDGKPGLDGAPGRKGENGLPGV 485

Query: 172 QGIPGDE--GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------MDGIPGKD 223
           +G PGD   G  G  G  G PG  G DGRDG+ G PG  G  G  G        G  G+ 
Sbjct: 486 RGPPGDSLNGLPGAPGPRGAPGPKGYDGRDGVNGLPGAPGSKGDRGGTCSACAPGTKGEK 545

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           GL G  G PG  G  G  GM GP G+ G  G+
Sbjct: 546 GLAGYPGQPGPQGDRGLPGMPGPVGDAGDDGL 577



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 71/151 (47%), Gaps = 20/151 (13%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  G  G  G+ G  G KG PG  G PG Q IPG  GK G  G  G PG +G  G  G R
Sbjct: 428 GAPGVSGPPGMPGLSGPKGEPGYRGTPG-QSIPGLPGKDGKPGLDGAPGRKGENGLPGVR 486

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG-------- 233
           GP GD            +GLPG PG  G PG  G DG  G +GLPG  G  G        
Sbjct: 487 GPPGDS----------LNGLPGAPGPRGAPGPKGYDGRDGVNGLPGAPGSKGDRGGTCSA 536

Query: 234 -TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              GT GEKG+ G  G  G  G  G+PG P 
Sbjct: 537 CAPGTKGEKGLAGYPGQPGPQGDRGLPGMPG 567



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 60/120 (50%), Gaps = 21/120 (17%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           E+G+ G PG+ G PG  G+PG  G    KG+ GY    G PG  G  G KG+ G PG  G
Sbjct: 653 EKGDAGLPGLSGKPGQDGLPGLPGN---KGEAGY----GQPGQPGFPGTKGEAGLPGLPG 705

Query: 195 LDGRDGLPGE--------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
             G  GLPGE              PGL G+PG  G  G PG+ G  G+ G PG  G  G+
Sbjct: 706 TPGLQGLPGEPAPENQVNPAPPGQPGLPGLPGTKGESGFPGRPGEVGQPGFPGLPGMKGD 765



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 89/199 (44%), Gaps = 39/199 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
           GL G  G KG+ G        G +GEKG  G  G PGPQG  G  G  GP GD G  G  
Sbjct: 519 GLPGAPGSKGDRGGTCSACAPGTKGEKGLAGYPGQPGPQGDRGLPGMPGPVGDAGDDGLP 578

Query: 171 -------------PQGIPGDEGKRGPKGDM----GYPGRIGLDGRDGLPGEPGLDGIPG- 212
                          G PG  G++G    +    G PG  GL G +G PG+PG DG+PG 
Sbjct: 579 GPAGRPGAPGPPGQDGFPGLPGQKGEPTQLVLRPGPPGYPGLKGENGYPGQPGNDGLPGA 638

Query: 213 --------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR-----GNRGKS 253
                           G  G+PG  G PG+DG+PG  G  GE G   P      G +G++
Sbjct: 639 PGPVGPPGQPGYPGEKGDAGLPGLSGKPGQDGLPGLPGNKGEAGYGQPGQPGFPGTKGEA 698

Query: 254 GINGVPGTPAICAYKRESC 272
           G+ G+PGTP +     E  
Sbjct: 699 GLPGLPGTPGLQGLPGEPA 717



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 81/197 (41%), Gaps = 62/197 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEM--------------GVKGERGEKGAPGVVGPPGPQ--GIPG 155
           PGL GP G+ G  G  G+               G  G +GE G PGV GPPG    G+PG
Sbjct: 439 PGLSGPKGEPGYRGTPGQSIPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSLNGLPG 498

Query: 156 DEGKRGPKGDMGYPGPQGI------PGDEGKRG------------PKGDMGYPGRIGLDG 197
             G RG  G  GY G  G+      PG +G RG             KG  GYPG+ G  G
Sbjct: 499 APGPRGAPGPKGYDGRDGVNGLPGAPGSKGDRGGTCSACAPGTKGEKGLAGYPGQPGPQG 558

Query: 198 RDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPG----------KDGIP 232
             GLPG PG  G  G +G+               DG PG   LPG          + G P
Sbjct: 559 DRGLPGMPGPVGDAGDDGLPGPAGRPGAPGPPGQDGFPG---LPGQKGEPTQLVLRPGPP 615

Query: 233 GTNGTNGEKGMTGPRGN 249
           G  G  GE G  G  GN
Sbjct: 616 GYPGLKGENGYPGQPGN 632


>gi|358337317|dbj|GAA37325.2| collagen type I/II/III/V/XI alpha [Clonorchis sinensis]
          Length = 1561

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/153 (46%), Positives = 85/153 (55%), Gaps = 3/153 (1%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +GP G  G  G  G+ G  G +GE GAPG+VG  GP G PG +G RGP+G +G  G
Sbjct: 485 PPGERGPQGSPGLPGNPGQQGNVGVKGEPGAPGLVGDSGPLGPPGYKGDRGPRGLIGPKG 544

Query: 171 PQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            QG PG     G+RG KG  G PG  G  G DG  G  G +G+PG  G  G+ G  G  G
Sbjct: 545 DQGAPGKTGVRGERGEKGAKGEPGNAGPRGSDGPLGSKGENGMPGEPGPRGMEGPKGNQG 604

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G+ G KG  GP G  G++G  G PG
Sbjct: 605 GRGAAGFVGSQGPKGAVGPAGPIGRTGEKGDPG 637



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/203 (38%), Positives = 92/203 (45%), Gaps = 48/203 (23%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------VGPPGP 150
            QG   S  E   PG +G  GQ G IG +GE G++G  G+ GA G          +G PGP
Sbjct: 846  QGLPGSPGE---PGSKGARGQPGPIGVRGEKGIRGLVGKPGAHGPTGVDGEMGDIGSPGP 902

Query: 151  QGIPGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKG------------------- 185
            QG  GD G R      GP GD+G  G QG PG+ G+ GP G                   
Sbjct: 903  QGSKGDRGDRGEEGLPGPTGDIGATGLQGAPGESGEPGPAGVAGPKGIEGKAGPPGPEGP 962

Query: 186  --DMGYPGRIGLDGRDGLPGEPGLDGIPGR---NGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                G PG  G  G  G  G PG DG PG     G+ G PGK G PG  G PG  G  GE
Sbjct: 963  VGVQGSPGPNGPRGEPGTKGLPGPDGHPGEVGPPGISGAPGKVGNPGPSGTPGVRGPKGE 1022

Query: 241  KGMTGPRGNRGKSGINGVPGTPA 263
             G+ G R      G+ G+PG P 
Sbjct: 1023 PGLLGSR------GLQGIPGKPG 1039



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 82/176 (46%), Gaps = 33/176 (18%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------GDMGYP 169
            GP G +G  G+ GE G KG RG+ G  GV G  G +G+ G  G  GP       GD+G P
Sbjct: 841  GPTGPQGLPGSPGEPGSKGARGQPGPIGVRGEKGIRGLVGKPGAHGPTGVDGEMGDIGSP 900

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGI---------------- 210
            GPQG  GD G RG +G  G  G IG  G  G P   GEPG  G+                
Sbjct: 901  GPQGSKGDRGDRGEEGLPGPTGDIGATGLQGAPGESGEPGPAGVAGPKGIEGKAGPPGPE 960

Query: 211  --------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                    PG NG  G PG  GLPG DG PG  G  G  G  G  GN G SG  GV
Sbjct: 961  GPVGVQGSPGPNGPRGEPGTKGLPGPDGHPGEVGPPGISGAPGKVGNPGPSGTPGV 1016



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 79/152 (51%), Gaps = 15/152 (9%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            G  GP G +GE G KG  G  G  GE       GAPG VG PGP G PG  G +G  G +
Sbjct: 967  GSPGPNGPRGEPGTKGLPGPDGHPGEVGPPGISGAPGKVGNPGPSGTPGVRGPKGEPGLL 1026

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------EPGLDGIPGRNGMDGIP 220
            G  G QGIPG  G  GP+G  G  GR G  GR G  G       PGL GIPG  G  G+P
Sbjct: 1027 GSRGLQGIPGKPGPDGPQGPKGIQGRPGRQGRPGPAGPPGIAGHPGLQGIPGPQGPLGLP 1086

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G  G  G+PG +G    +G+ GP G  G+
Sbjct: 1087 GDVGPQGSTGLPGRDGG---RGIMGPDGAVGE 1115



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 87/184 (47%), Gaps = 36/184 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------------------- 150
           GL GP G +G  G  G  G +G +G+KG  G +GP GP                      
Sbjct: 751 GLAGPRGPQGNPGRPGVEGFEGPQGDKGDVGPIGPTGPSGPVGLRGSPGPVGPPGEVGPK 810

Query: 151 --QGIPGDEGKRGPKGD------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
             QG PG +G  G KGD            +G  GPQG+PG  G+ G KG  G PG IG+ 
Sbjct: 811 GDQGRPGMQGSIGDKGDRGPHGPQGPPGVVGPTGPQGLPGSPGEPGSKGARGQPGPIGVR 870

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G+ G  G  G  G  G+DG  G  G PG  G  G  G  GE+G+ GP G+ G +G+ 
Sbjct: 871 GEKGIRGLVGKPGAHGPTGVDGEMGDIGSPGPQGSKGDRGDRGEEGLPGPTGDIGATGLQ 930

Query: 257 GVPG 260
           G PG
Sbjct: 931 GAPG 934



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 90/188 (47%), Gaps = 30/188 (15%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE------------KGAPGVVGP 147
            +G    T +    GLQG  G+ GE G  G  G KG  G+            +G+PG  GP
Sbjct: 915  EGLPGPTGDIGATGLQGAPGESGEPGPAGVAGPKGIEGKAGPPGPEGPVGVQGSPGPNGP 974

Query: 148  ---PGPQGIPGDE---GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
               PG +G+PG +   G+ GP G  G PG  G PG  G  G +G  G PG +G  G  G+
Sbjct: 975  RGEPGTKGLPGPDGHPGEVGPPGISGAPGKVGNPGPSGTPGVRGPKGEPGLLGSRGLQGI 1034

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGL------------PGKDGIPGTNGTNGEKGMTGPRGN 249
            PG+PG DG  G  G+ G PG+ G             PG  GIPG  G  G  G  GP+G+
Sbjct: 1035 PGKPGPDGPQGPKGIQGRPGRQGRPGPAGPPGIAGHPGLQGIPGPQGPLGLPGDVGPQGS 1094

Query: 250  RGKSGING 257
             G  G +G
Sbjct: 1095 TGLPGRDG 1102



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 79/160 (49%), Gaps = 18/160 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-------- 164
            G  GP G KG+ G +GE G+ G  G+ GA G+ G PG  G PG  G  GPKG        
Sbjct: 898  GSPGPQGSKGDRGDRGEEGLPGPTGDIGATGLQGAPGESGEPGPAGVAGPKGIEGKAGPP 957

Query: 165  -------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN 214
                     G PGP G  G+ G +G  G  G+PG +G  G  G PG+   PG  G PG  
Sbjct: 958  GPEGPVGVQGSPGPNGPRGEPGTKGLPGPDGHPGEVGPPGISGAPGKVGNPGPSGTPGVR 1017

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G  G PG  G  G  GIPG  G +G +G  G +G  G+ G
Sbjct: 1018 GPKGEPGLLGSRGLQGIPGKPGPDGPQGPKGIQGRPGRQG 1057



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 87/175 (49%), Gaps = 33/175 (18%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G +G  G +G +G KG+RG  G  G   VVGP GPQG+PG  G+ G KG  G PGP G+ 
Sbjct: 811 GDQGRPGMQGSIGDKGDRGPHGPQGPPGVVGPTGPQGLPGSPGEPGSKGARGQPGPIGVR 870

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------DGIP------GRNGMD 217
           G++G RG  G  G  G  G+DG  G  G PG             +G+P      G  G+ 
Sbjct: 871 GEKGIRGLVGKPGAHGPTGVDGEMGDIGSPGPQGSKGDRGDRGEEGLPGPTGDIGATGLQ 930

Query: 218 GIPGKDGLPGKDGIPGTNGTNGE------------KGMTGPRGNRGKSGINGVPG 260
           G PG+ G PG  G+ G  G  G+            +G  GP G RG+ G  G+PG
Sbjct: 931 GAPGESGEPGPAGVAGPKGIEGKAGPPGPEGPVGVQGSPGPNGPRGEPGTKGLPG 985



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/126 (43%), Positives = 68/126 (53%), Gaps = 6/126 (4%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           ++GP GP+G+ G  G RGP G+ G  G  G+PG+ G++G  G  G PG  GL G  G  G
Sbjct: 467 MLGPQGPRGLTGLPGLRGPPGERGPQGSPGLPGNPGQQGNVGVKGEPGAPGLVGDSGPLG 526

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNR---GKSGING 257
            PG  G  G  G+ G  G  G PGK G+    G  G  GE G  GPRG+    G  G NG
Sbjct: 527 PPGYKGDRGPRGLIGPKGDQGAPGKTGVRGERGEKGAKGEPGNAGPRGSDGPLGSKGENG 586

Query: 258 VPGTPA 263
           +PG P 
Sbjct: 587 MPGEPG 592



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 75/169 (44%), Gaps = 19/169 (11%)

Query: 53  PQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPP 112
           PQ P      P L     ER  +       NP    N   +    A  G    +    PP
Sbjct: 470 PQGPRGLTGLPGLRGPPGERGPQGSPGLPGNPGQQGNVGVKGEPGA-PGLVGDSGPLGPP 528

Query: 113 GLQGP------IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IP 154
           G +G       IG KG+ GA G+ GV+GERGEKGA G  G  GP+G            +P
Sbjct: 529 GYKGDRGPRGLIGPKGDQGAPGKTGVRGERGEKGAKGEPGNAGPRGSDGPLGSKGENGMP 588

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           G+ G RG +G  G  G +G  G  G +GPKG +G  G IG  G  G PG
Sbjct: 589 GEPGPRGMEGPKGNQGGRGAAGFVGSQGPKGAVGPAGPIGRTGEKGDPG 637



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 67/143 (46%), Gaps = 39/143 (27%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E  PPG+ G     G++G  G  G  G RG KG PG++G  G QGIPG  G  GP+G  G
Sbjct: 992  EVGPPGISG---APGKVGNPGPSGTPGVRGPKGEPGLLGSRGLQGIPGKPGPDGPQGPKG 1048

Query: 168  ---------------------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
                                 +PG QGIP      GP+G +G PG +G  G  GL     
Sbjct: 1049 IQGRPGRQGRPGPAGPPGIAGHPGLQGIP------GPQGPLGLPGDVGPQGSTGL----- 1097

Query: 207  LDGIPGRNGMDGIPGKDGLPGKD 229
                PGR+G  GI G DG  G+D
Sbjct: 1098 ----PGRDGGRGIMGPDGAVGED 1116



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 84/207 (40%), Gaps = 66/207 (31%)

Query: 111 PPGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           P G  GP+G KGE G  GE       G KG +G +GA G VG  GP+G  G  G  G  G
Sbjct: 572 PRGSDGPLGSKGENGMPGEPGPRGMEGPKGNQGGRGAAGFVGSQGPKGAVGPAGPIGRTG 631

Query: 165 DMGYPGP---------------------------QGIPGDE---------GKRGPKGDMG 188
           + G PGP                            G+ GDE         G  GP+G  G
Sbjct: 632 EKGDPGPIGPLGPRGPVGPPGAPGPRGAPGPSGPTGMKGDEGPVGPTGPIGPVGPQGSRG 691

Query: 189 YPGRIGLD---------------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            PG +G                 G  G PGEPGL G  G  GM G PG+          G
Sbjct: 692 MPGFVGGAGPVGLPGRPGPPGYVGDRGEPGEPGLPGEIGPMGMVGAPGQT---------G 742

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  GE+G+ GPRG +G  G  GV G
Sbjct: 743 EQGAVGERGLAGPRGPQGNPGRPGVEG 769



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 85/208 (40%), Gaps = 60/208 (28%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGP-------- 150
           E  P G++GP   KG  G +G  G  G +G KGA G  GP         PGP        
Sbjct: 590 EPGPRGMEGP---KGNQGGRGAAGFVGSQGPKGAVGPAGPIGRTGEKGDPGPIGPLGPRG 646

Query: 151 -------------------QGIPGDEGKRGPKGDMGYPGPQ---GIPGDEGK-------- 180
                               G+ GDEG  GP G +G  GPQ   G+PG  G         
Sbjct: 647 PVGPPGAPGPRGAPGPSGPTGMKGDEGPVGPTGPIGPVGPQGSRGMPGFVGGAGPVGLPG 706

Query: 181 ----------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
                     RG  G+ G PG IG  G  G PG+ G  G  G  G+ G  G  G PG+ G
Sbjct: 707 RPGPPGYVGDRGEPGEPGLPGEIGPMGMVGAPGQTGEQGAVGERGLAGPRGPQGNPGRPG 766

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           + G  G  G+KG  GP G  G SG  G+
Sbjct: 767 VEGFEGPQGDKGDVGPIGPTGPSGPVGL 794



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 77/171 (45%), Gaps = 33/171 (19%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           +G +GE G  G  GE G  G+VG PG    QG  G+ G  GP+G  G PG  G+ G EG 
Sbjct: 714 VGDRGEPGEPGLPGEIGPMGMVGAPGQTGEQGAVGERGLAGPRGPQGNPGRPGVEGFEGP 773

Query: 181 RGPKGDMGYPGRIGLDGRDGL------------------PGEPGLDGIPGRNG------- 215
           +G KGD+G  G  G  G  GL                   G PG+ G  G  G       
Sbjct: 774 QGDKGDVGPIGPTGPSGPVGLRGSPGPVGPPGEVGPKGDQGRPGMQGSIGDKGDRGPHGP 833

Query: 216 -----MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                + G  G  GLPG  G PG+ G  G+ G  G RG +G  G+ G PG 
Sbjct: 834 QGPPGVVGPTGPQGLPGSPGEPGSKGARGQPGPIGVRGEKGIRGLVGKPGA 884



 Score = 46.2 bits (108), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 63/136 (46%), Gaps = 30/136 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGDM 166
            GLQGP+GQ G          KG  G+ G  G VG PG QG+      PG  G  GP+G+ 
Sbjct: 1183 GLQGPVGQPG---------TKGNPGKPGGTGPVGNPGDQGLKGVKGNPGTVGPTGPQGEQ 1233

Query: 167  GYPGPQGIPGD------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G  G  G PG+            +G RGP GD G P   G  GR G  G PG  G  G+ 
Sbjct: 1234 GSIGDPGPPGETGEVGGEGDVGPQGPRGPTGDDGEP---GPQGRQGPAGPPGQKGPRGKP 1290

Query: 215  GMDGIPGKDGLPGKDG 230
            G  G PG  G PG  G
Sbjct: 1291 GQPGEPGPMGRPGPQG 1306


>gi|354505950|ref|XP_003515030.1| PREDICTED: collagen alpha-2(V) chain [Cricetulus griseus]
          Length = 1499

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGVQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPG 639



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 92/189 (48%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGATGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---K 222
            G  G+PG  G  GP    G  G+PG  G+ G  G  G  G +G  G+ G  G PG    
Sbjct: 356 RGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGS 415

Query: 223 DGLPGK---DGIPGTNGTNGEKGM------------------TGPRGNRGKSGINGVPGT 261
            GLPG    DG PG  G  G  G                   TGP+G RG+ G  GVPG 
Sbjct: 416 HGLPGAVGTDGTPGAKGPTGSAGTSGPPGLSGPPGSPGPQGSTGPQGIRGQPGDPGVPGF 475

Query: 262 PAICAYKRE 270
                 K E
Sbjct: 476 KGEAGPKGE 484



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 97/233 (41%), Gaps = 60/233 (25%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP G   P G P
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 155 GDEGKRGP---------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------ 199
           G++G+ GP          G MG PGP+G  GD GK G  G+ G PG+ G  G+D      
Sbjct: 594 GEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPS 653

Query: 200 ------------------------------------------GLPGEPGLDGIPGRNGMD 217
                                                     G+PGEPG  G  G  G  
Sbjct: 654 GPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKSGDQGVPGEPGAVGPLGPRGER 713

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G PG+ G PG  G+PG  G  G  G  GP+GN G +G  G  G P +     E
Sbjct: 714 GNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGE 766



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 85/207 (41%), Gaps = 54/207 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------- 147
            M+G    T    P G QG  G+ G  G  G  G+ G  G  G PG  GP          
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGETGPPGPVGSHGLPGAVGTDGTPGAKGPTGSAGTSGPP 443

Query: 148 -----------------------PGPQGIPGDEGKRGPKGD---MGYPGPQGIPGDEGKR 181
                                  PG  G+PG +G+ GPKG+    G  GP G PG+EGKR
Sbjct: 444 GLSGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKR 503

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP+GD                  PG  G PG  G  G PG  G PG DG+PG  G  GE+
Sbjct: 504 GPRGD------------------PGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGER 545

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G +G  G  G PG P +   +
Sbjct: 546 GPVGSSGPKGGQGDPGRPGEPGLPGAR 572



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 88/170 (51%), Gaps = 22/170 (12%)

Query: 128 GEMGVKGERGEKGAPGV---VGP---PGPQGI------PGDEGKRGPKGDMGYPGPQGIP 175
           G  G++G+ G+ G PG     GP   PGP G+      PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGS 622



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 88/201 (43%), Gaps = 30/201 (14%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  GA G  GP GP G  G  G R
Sbjct: 279 GFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGAKGEAGPTGPMGAMGPLGPR 338

Query: 161 GPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G+ G  GPQG PG        GK GP G +G PG  G  G  G+ GE G  G  G  
Sbjct: 339 GMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPE 398

Query: 215 GMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNR--------------------- 250
           G  G  G+ G P   G  G+PG  GT+G  G  GP G+                      
Sbjct: 399 GPQGQRGETGPPGPVGSHGLPGAVGTDGTPGAKGPTGSAGTSGPPGLSGPPGSPGPQGST 458

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  GI G PG P +  +K E+
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEA 479



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G +G  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1146



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 75/151 (49%), Gaps = 12/151 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G        G +
Sbjct: 267 GEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVG------ATGAK 320

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDGIP 232
           G+ GP G MG  G +G  G  G  G  G  G PG+ G  G+PGK G      +PG  G P
Sbjct: 321 GEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFP 380

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  GE G TG RG  G  G  G  G P 
Sbjct: 381 GNPGMKGEAGPTGARGPEGPQGQRGETGPPG 411



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 88/190 (46%), Gaps = 39/190 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK----------- 159
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 601 PPGSVGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 660

Query: 160 -RGPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PG+ G     GP+G+ G PG  G
Sbjct: 661 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKSGDQGVPGEPGAVGPLGPRGERGNPGERG 720

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
             G  GLPGE G+ G  G +G  G PG  G  G  G PG  G  GE+G+    GP+G+RG
Sbjct: 721 EPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRG 780

Query: 252 KSGINGVPGT 261
             G  G  GT
Sbjct: 781 GIGEKGAEGT 790



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 85/197 (43%), Gaps = 54/197 (27%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKG---------DMGYP 169
           GE GA G +G +GERG   E+G PG+ G PG +G+ G  G  GPKG         D G P
Sbjct: 699 GEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPP 758

Query: 170 GPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDG-------------------------- 200
           G QG+PG+ G     GPKGD G  G  G +G  G                          
Sbjct: 759 GLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEP 818

Query: 201 ----LPGEPGLDGIPGRNGMDGIPGK---------DGLPGKDGIPGTNGTNGEKGMTGPR 247
               L G PG  G PG  G +G  G          DG PG  G PG  G  G+ G  GP+
Sbjct: 819 GPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQ 878

Query: 248 GNRGKSGINGVPGTPAI 264
           G  G  G +G  G P +
Sbjct: 879 GLAGSPGPHGPHGVPGL 895



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPH------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPIGEPGKEGPPGLRGDPGSHG 951



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 70/148 (47%), Gaps = 27/148 (18%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           ++G  G PG VGP GP+G  G+ G+RG  G  G PG +G+ G  G  GPKG+ G  G IG
Sbjct: 694 DQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIG 753

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG--------------- 239
                   G PGL G+PG  G+ G PG  G  G  G  G  GT G               
Sbjct: 754 DT------GPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPG 807

Query: 240 ------EKGMTGPRGNRGKSGINGVPGT 261
                 EKG  GPRG  G  G  G PG+
Sbjct: 808 PAGPTGEKGEPGPRGLVGPPGSRGNPGS 835



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPVGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1147



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 65/140 (46%), Gaps = 39/140 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G  G  G  G +G +G+RG+         PGP G+PG +G        G PGP
Sbjct: 1046 PGPEGPAGNDGTPGRDGAVGERGDRGD---------PGPAGLPGSQGA------PGTPGP 1090

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PGD G+R   GD G  G +G  GR                      GK GLPG  G 
Sbjct: 1091 VGAPGDAGQR---GDPGSRGPVGPPGRA---------------------GKRGLPGPQGP 1126

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G NG++G  G +G+RG
Sbjct: 1127 RGDKGDNGDRGDRGQKGHRG 1146



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 68/150 (45%), Gaps = 2/150 (1%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G  G+ G  G  G  G+PG  G+PG +G RG KG  G  G +G  G  G  G  G 
Sbjct: 269 PGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGAKGEAGPTGP 328

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G  G  G  G+PG+ G  G  G PG  G +G  G  GP G  G  G +G PG P +   
Sbjct: 329 MGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGE 388

Query: 268 KRESCSLLPNSETSQL--LIPPTIVGSEHI 295
              + +  P     Q     PP  VGS  +
Sbjct: 389 AGPTGARGPEGPQGQRGETGPPGPVGSHGL 418



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 87/241 (36%), Gaps = 90/241 (37%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G P   GP G+PG +G R   GP G  
Sbjct: 849  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHGVPGLKGGRGTQGPPGAT 908

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 909  GFPGSAGRVGPPGPAGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 968

Query: 194  ------------------------------GLDGRDGLPGEPGLDGIPGRNGMDGI---- 219
                                          G  G  G+PG PG  G PG+ G  G     
Sbjct: 969  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 1028

Query: 220  -----------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                             PG +G  G DG PG +G  GE+G  G  G  G  G  G PGTP
Sbjct: 1029 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTP 1088

Query: 263  A 263
             
Sbjct: 1089 G 1089



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 81/198 (40%), Gaps = 63/198 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 886  PHGPHGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPIGEPGKEGPPGLRG 945

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 946  DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1005

Query: 228  KDGIPGTNGTNGEKGMTG 245
              G+PG  GT G+ G TG
Sbjct: 1006 MPGLPGPAGTPGKVGPTG 1023



 Score = 39.3 bits (90), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 87/260 (33%), Gaps = 114/260 (43%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------------------- 146
            PG QG  G  G  G  G  G+KG RG +G PG  G                         
Sbjct: 875  PGPQGLAGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPIGE 934

Query: 147  -----PPGPQGIPGDEGK------------------------------------------ 159
                 PPG +G PG  G+                                          
Sbjct: 935  PGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGI 994

Query: 160  ------RGPKGDMGYPGPQGIP---------------------------GDEGKRGPKGD 186
                  RG +G  G PGP G P                           G+ G  GP G+
Sbjct: 995  VGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGN 1054

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGT------ 237
             G PGR G  G  G  G+PG  G+PG  G  G PG  G P   G+ G PG+ G       
Sbjct: 1055 DGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPVGPPGR 1114

Query: 238  NGEKGMTGPRGNRGKSGING 257
             G++G+ GP+G RG  G NG
Sbjct: 1115 AGKRGLPGPQGPRGDKGDNG 1134


>gi|284989858|ref|YP_003408412.1| collagen triple helix repeat-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284063103|gb|ADB74041.1| Collagen triple helix repeat protein [Geodermatophilus obscurus DSM
           43160]
          Length = 319

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 90/163 (55%), Gaps = 3/163 (1%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      +  P G  GP+G++G+ G  G +G  GE G+KG  G  GP GP G  G++G  
Sbjct: 36  GPAGEPGDKGPKGPAGPVGERGDKGENGPVGPAGEPGDKGEKGPSGPIGPVGERGEKGPI 95

Query: 161 GPKGD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GP+G+    G PGPQG  G EG+ GP+G+ G PG  G  G  G  G  GL G+ G  G  
Sbjct: 96  GPRGEQGPQGEPGPQGEQGPEGETGPQGEQGLPGSTGRPGEQGEQGPQGLPGLRGETGPQ 155

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G+ G  G+ G+ G  G  G  G TG +G +G  G+ G+PG
Sbjct: 156 GVAGEQGPQGEQGLRGAQGPRGVIGETGEQGEKGLPGVQGLPG 198



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 90/161 (55%), Gaps = 15/161 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GPIG  GE G KG +G +GE+G +G PG      PQG  G EG+ GP+G+ G PG  
Sbjct: 78  GPSGPIGPVGERGEKGPIGPRGEQGPQGEPG------PQGEQGPEGETGPQGEQGLPGST 131

Query: 173 GIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDGIPGRNGM---DGIPGKDGLP 226
           G PG++G++GP+G  G  G     G+ G  G  GE GL G  G  G+    G  G+ GLP
Sbjct: 132 GRPGEQGEQGPQGLPGLRGETGPQGVAGEQGPQGEQGLRGAQGPRGVIGETGEQGEKGLP 191

Query: 227 GKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPAI 264
           G  G+PG  G  G    +G+ GP+G +G +G  G  G P +
Sbjct: 192 GVQGLPGLQGERGAAGVRGLQGPQGVQGPAGPAGPVGLPGV 232



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/138 (42%), Positives = 72/138 (52%), Gaps = 15/138 (10%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGP---------KGDMGYPGPQGIPGDEGKRGPKG 185
           E G++G  G  GP GP G PGD+G +GP         KG+ G  GP G PGD+G++GP G
Sbjct: 22  EEGDRGVKGPTGPVGPAGEPGDKGPKGPAGPVGERGDKGENGPVGPAGEPGDKGEKGPSG 81

Query: 186 ------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
                 + G  G IG  G  G  GEPG  G  G  G  G  G+ GLPG  G PG  G  G
Sbjct: 82  PIGPVGERGEKGPIGPRGEQGPQGEPGPQGEQGPEGETGPQGEQGLPGSTGRPGEQGEQG 141

Query: 240 EKGMTGPRGNRGKSGING 257
            +G+ G RG  G  G+ G
Sbjct: 142 PQGLPGLRGETGPQGVAG 159



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 84/157 (53%), Gaps = 21/157 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG---------EKGAPGVVGPPG------PQGIPGDE 157
           G +GPIG +GE G +GE G +GE+G         E+G PG  G PG      PQG+PG  
Sbjct: 90  GEKGPIGPRGEQGPQGEPGPQGEQGPEGETGPQGEQGLPGSTGRPGEQGEQGPQGLPGLR 149

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G+ GP+G  G  GPQ   G++G RG +G  G  G  G  G  GL   PG+ G+PG  G  
Sbjct: 150 GETGPQGVAGEQGPQ---GEQGLRGAQGPRGVIGETGEQGEKGL---PGVQGLPGLQGER 203

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G  GL G  G+ G  G  G  G+ G +G +G +G
Sbjct: 204 GAAGVRGLQGPQGVQGPAGPAGPVGLPGVQGPQGPAG 240



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 6/143 (4%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG      E  P G  GP G++G  G+ G  G +GE+G +G PG+ G  GPQG+ G++G 
Sbjct: 104 QGEPGPQGEQGPEGETGPQGEQGLPGSTGRPGEQGEQGPQGLPGLRGETGPQGVAGEQGP 163

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G +G  G  GP+G+ G+ G+   +G+ G PG  GL    GL GE G  G+ G  G  G+
Sbjct: 164 QGEQGLRGAQGPRGVIGETGE---QGEKGLPGVQGL---PGLQGERGAAGVRGLQGPQGV 217

Query: 220 PGKDGLPGKDGIPGTNGTNGEKG 242
            G  G  G  G+PG  G  G  G
Sbjct: 218 QGPAGPAGPVGLPGVQGPQGPAG 240



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 56/114 (49%), Gaps = 9/114 (7%)

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---- 211
           +EG RG KG  G  GP G PGD+G +GP G +G  G  G +G  G  GEPG  G      
Sbjct: 22  EEGDRGVKGPTGPVGPAGEPGDKGPKGPAGPVGERGDKGENGPVGPAGEPGDKGEKGPSG 81

Query: 212 -----GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                G  G  G  G  G  G  G PG  G  G +G TGP+G +G  G  G PG
Sbjct: 82  PIGPVGERGEKGPIGPRGEQGPQGEPGPQGEQGPEGETGPQGEQGLPGSTGRPG 135


>gi|444726060|gb|ELW66608.1| Collagen alpha-2(V) chain [Tupaia chinensis]
          Length = 1394

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 90/192 (46%), Gaps = 24/192 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP--- 154
            M+G    T    P G QG  G+ G  G  G  G+ G  G  G PG  GP G QG     
Sbjct: 315 GMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAIGTDGTPGAKGPTGSQGTSGPP 374

Query: 155 ---------------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLD 196
                          G +G RG  G  G  GP G PG+EGKRGP+GD   +G PG +G  
Sbjct: 375 GSAGPPGSPGPQGSTGPQGIRGQPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGER 434

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G  G PG DG+P   G  G PG  G PG DG+PG  G  GE+G  G  G +G  G  
Sbjct: 435 GAPGNRGFPGSDGLP---GPKGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDP 491

Query: 257 GVPGTPAICAYK 268
           G PG P +   +
Sbjct: 492 GRPGEPGLPGAR 503



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 94/177 (53%), Gaps = 33/177 (18%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------QGIPGDEGKRG 161
           P G+QGPIG  GE         +G+RG +G PG VGPPGP         +G PG +G  G
Sbjct: 400 PHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPG 450

Query: 162 PK---GDMGYPGPQGIPGD---EGKRGP---------KGDMGYPGRIGLDGRDGLPGEPG 206
           PK   G+ G+PG  G+PG    +G+RGP         +GD G PG  GL G  GL G PG
Sbjct: 451 PKGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPG 510

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           + G  G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+ G +G  G  G P 
Sbjct: 511 VQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGLAGERGEQGPPG 567



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 92/180 (51%), Gaps = 33/180 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  G  G+R   G+ G 
Sbjct: 509 PGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGLAGER---GEQGP 565

Query: 169 PGP---------------------QGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGE 204
           PGP                     QG+PGD    G  GP+G+ G PG  G  G  GLPGE
Sbjct: 566 PGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGVVGPLGPRGERGNPGERGEPGITGLPGE 625

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
            G+ G  G +G  G PG  G PG  G PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 626 KGMAGGHGPDGPKGSPGPTGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 685



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 642 GPTGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 701

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 702 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 760

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 761 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 808



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 91/200 (45%), Gaps = 30/200 (15%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP G   P G P
Sbjct: 465 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 524

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---------------- 198
           G++G+ GP G +G    +G PG  G  GPKG  G  G  G  G                 
Sbjct: 525 GEDGRPGPPGSVGI---RGQPGSMGLPGPKGSSGLAGERGEQGPPGPTGFQGLPGPPGPP 581

Query: 199 --------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                    G+PG+PG+ G  G  G  G PG+ G PG  G+PG  G  G  G  GP+G+ 
Sbjct: 582 GEGGKPGDQGVPGDPGVVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSP 641

Query: 251 GKSGINGVPGTPAICAYKRE 270
           G +G  G  G P +     E
Sbjct: 642 GPTGTPGDTGPPGLQGMPGE 661



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 87/183 (47%), Gaps = 33/183 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGD--- 165
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G    
Sbjct: 242 PGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGP 301

Query: 166 ---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
               G PG  G PG +G+ GP G  G  G  G  G  G PG  G  G+PG  G DG PG 
Sbjct: 302 LGLAGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAIGTDGTPGA 361

Query: 223 DG------------------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G                          G  GI G  G +G +G  GP G  GK G  G 
Sbjct: 362 KGPTGSQGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGPHGIQGPIGPPGEEGKRGPRGD 421

Query: 259 PGT 261
           PGT
Sbjct: 422 PGT 424



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 82/170 (48%), Gaps = 30/170 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY 168
           PG  G  G+ G  GA+G  G +G+RGE G PG VG    PG  G  G  G +GP G  G 
Sbjct: 311 PGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAIGTDGTPGAKGPTGSQGT 370

Query: 169 P------------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
                              GPQGI G  G  G +G +G PG    +G+ G  G+PG  G 
Sbjct: 371 SGPPGSAGPPGSPGPQGSTGPQGIRGQPGPHGIQGPIGPPGE---EGKRGPRGDPGTVGP 427

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------GMTGPRGNRGKSG 254
           PG  G  G PG  G PG DG+PG  G  G +      G+ GP+G +G+ G
Sbjct: 428 PGPVGERGAPGNRGFPGSDGLPGPKGAPGNRGFPGSDGLPGPKGAQGERG 477



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 79/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 884  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 937

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 938  VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 997

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+ G  G  G+KG  G RG+RG+ G  G
Sbjct: 998  PGSRGPIGPPGRAGKRGLLGPQGPRGDKGDHGDRGDRGQKGHRG 1041



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 83/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGD 165
           PG+ GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG     G  GP G 
Sbjct: 596 PGVVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTPGDTGPPGL 655

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 656 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 715

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 716 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 762



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 77/161 (47%), Gaps = 21/161 (13%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG+             
Sbjct: 213 GEPGRNGNVGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPT 272

Query: 166 -----MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                MG  GP+G+PG+ G+ GP+   G PG +GL G  G PG PG+ G  G  G  G  
Sbjct: 273 GPMGAMGPLGPRGMPGERGRLGPQ---GAPGPLGLAGSPGFPGNPGMKGEAGPTGARGPE 329

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G+ G PG  G+ G  G  G  G  G  G  G  GT
Sbjct: 330 GPQGQRGETGPPGPVGSQGLPGAIGTDGTPGAKGPTGSQGT 370



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 711 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 770

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------------ 217
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 771 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPA 824

Query: 218 ---GIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 825 GPLGEPGKEGPPGLRGDPGSHG 846



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 87/241 (36%), Gaps = 90/241 (37%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR---GPKGDM 166
           G QGP GQ G  G  GE G KG+ G  G  G+ G PGP    G+PG +G R   GP G  
Sbjct: 744 GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 803

Query: 167 GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
           G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 804 GFPGSAGRVGPPGPTGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 863

Query: 194 ------------------------------GLDGRDGLPGEPGLDGIPGRNGMDGI---- 219
                                         G  G  G+PG PG  G PG+ G  G     
Sbjct: 864 GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 923

Query: 220 -----------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                            PG +G  G DG PG +G  GE+G  G  G  G  G  G PGTP
Sbjct: 924 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTP 983

Query: 263 A 263
            
Sbjct: 984 G 984



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 80/198 (40%), Gaps = 63/198 (31%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 721 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 780

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIGLD---------------GRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 781 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPLGEPGKEGPPGLRG 840

Query: 210 IPG------------------------------------------RNGMDGIPGKDGLPG 227
            PG                                          + G+ G+PG+ G  G
Sbjct: 841 DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 900

Query: 228 KDGIPGTNGTNGEKGMTG 245
             G+PG  GT G+ G TG
Sbjct: 901 MPGLPGPAGTPGKVGPTG 918



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 49/90 (54%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 953  PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1012

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+ G +G RG KGD G  G  G  G  G 
Sbjct: 1013 RGLLGPQGPRGDKGDHGDRGDRGQKGHRGF 1042



 Score = 43.1 bits (100), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 54/121 (44%), Gaps = 12/121 (9%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP--------- 205
           G+ G  G  G  G+PG  G+PG +G RG KG  G  G +G  G  G  G           
Sbjct: 222 GEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPL 281

Query: 206 ---GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
              G+ G  GR G  G PG  GL G  G PG  G  GE G TG RG  G  G  G  G P
Sbjct: 282 GPRGMPGERGRLGPQGAPGPLGLAGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPP 341

Query: 263 A 263
            
Sbjct: 342 G 342



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 94/257 (36%), Gaps = 99/257 (38%)

Query: 100  QGFCNSTKEYCP---PGLQGPIGQKGEIGAKGEMGVKG------------------ERGE 138
            QG   S   + P   PGL+G  G +G  GA G  G  G                  E G+
Sbjct: 773  QGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPLGEPGK 832

Query: 139  KGAPGVVGPPGP------------------------------------------QGIPGD 156
            +G PG+ G PG                                           +GI G 
Sbjct: 833  EGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGM 892

Query: 157  EGKRGPKGDMGYPGPQGIP---------------------------GDEGKRGPKGDMGY 189
             G+RG +G  G PGP G P                           G+ G  GP G+ G 
Sbjct: 893  PGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGT 952

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGT------NGE 240
            PGR G  G  G  G+PG  G+PG  G  G PG  G P   G+ G PG+ G        G+
Sbjct: 953  PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1012

Query: 241  KGMTGPRGNRGKSGING 257
            +G+ GP+G RG  G +G
Sbjct: 1013 RGLLGPQGPRGDKGDHG 1029


>gi|432933253|ref|XP_004081859.1| PREDICTED: collagen alpha-2(V) chain-like [Oryzias latipes]
          Length = 1493

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/190 (40%), Positives = 95/190 (50%), Gaps = 39/190 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGK---------R 160
           G  GP G  G+ G  GE G+ G RG  G PGV G    PGP G PG++G+         R
Sbjct: 529 GPPGPKGSLGDPGRPGEPGLPGARGLTGTPGVQGAEGKPGPLGAPGEDGRPGPAGSIGNR 588

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------------LPGEPGLD 208
           GP G MG PGP+G  GD+GK G +G  G PG+ G  G+DG            + GE G  
Sbjct: 589 GPAGTMGVPGPKGFSGDQGKTGEQGSAGVPGQRGPPGKDGEVGPAGPPGPSGVAGERGEQ 648

Query: 209 GIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G PG NG  G+PG              G+PG+ G  G  G  GE+G+ G RG  G SG+ 
Sbjct: 649 GPPGVNGFQGLPGNQGPPGEPGKPGDQGIPGELGPVGQVGPRGERGIPGERGELGSSGLQ 708

Query: 257 ---GVPGTPA 263
              G+PG P 
Sbjct: 709 GPKGIPGAPG 718



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/140 (46%), Positives = 80/140 (57%), Gaps = 12/140 (8%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           +G IG +GE   +G+RG +G PG VGP GP G      +RG  G+ G+PG  G+PG +G 
Sbjct: 471 QGVIGPQGE---EGKRGLRGDPGSVGPIGPVG------ERGAPGNRGFPGADGLPGPKGA 521

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           +G +G  G PG  G  G  G PGEPGL   PG  G+ G PG  G  GK G  G  G +G 
Sbjct: 522 QGDRGTSGPPGPKGSLGDPGRPGEPGL---PGARGLTGTPGVQGAEGKPGPLGAPGEDGR 578

Query: 241 KGMTGPRGNRGKSGINGVPG 260
            G  G  GNRG +G  GVPG
Sbjct: 579 PGPAGSIGNRGPAGTMGVPG 598



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 67/122 (54%), Gaps = 15/122 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------- 164
           PG  GP+GQ   +G +GE G+ GERGE G+ G+ GP   +GIPG  G  GPKG       
Sbjct: 678 PGELGPVGQ---VGPRGERGIPGERGELGSSGLQGP---KGIPGAPGPDGPKGSPGPTGA 731

Query: 165 --DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             DMG PG QG+PG+ G  GP G  G  G IG  G +G PG  G  G PG  G  G  G 
Sbjct: 732 LGDMGPPGLQGMPGERGISGPPGPKGDRGAIGEKGSEGTPGNDGARGTPGPVGPAGPAGP 791

Query: 223 DG 224
            G
Sbjct: 792 SG 793



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 91/194 (46%), Gaps = 39/194 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QG  G+ G +GA GE G  G  G    +G  G +G PGP+G  GD+GK G +G  G 
Sbjct: 558 PGVQGAEGKPGPLGAPGEDGRPGPAGSIGNRGPAGTMGVPGPKGFSGDQGKTGEQGSAGV 617

Query: 169 PGPQGIPGDEGK------------RGPKGDMGYPGRIGLDG---------------RDGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 618 PGQRGPPGKDGEVGPAGPPGPSGVAGERGEQGPPGVNGFQGLPGNQGPPGEPGKPGDQGI 677

Query: 202 PGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPR---GNRGK 252
           PGE G  G  G  G  GIPG+       GL G  GIPG  G +G KG  GP    G+ G 
Sbjct: 678 PGELGPVGQVGPRGERGIPGERGELGSSGLQGPKGIPGAPGPDGPKGSPGPTGALGDMGP 737

Query: 253 SGINGVPGTPAICA 266
            G+ G+PG   I  
Sbjct: 738 PGLQGMPGERGISG 751



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 74/153 (48%), Gaps = 21/153 (13%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G +G  G  G +G+ G +G  G  GPPG  G+PG  G RG  G  G  GPQG+P   
Sbjct: 1009 GPSGPVGVPGATGPRGDPGPEGPAGTDGPPGKDGLPGQRGDRGDLGPEGLIGPQGLP--- 1065

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDGIPGTN 235
               GP G +            G PG+PG  G PG  G  G P   GK GL G  G  G  
Sbjct: 1066 ---GPNGPV------------GAPGDPGKRGEPGSRGPQGPPGQAGKRGLGGPQGPRGDK 1110

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G+ G  G +G+RG +G+ G+PG P     +
Sbjct: 1111 GDLGDHGERGQKGHRGFTGLQGLPGPPGTTGEQ 1143



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 89/176 (50%), Gaps = 36/176 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDE----------- 157
           PG +GP G+ GE+G  G  G   V GERGE+G PGV G    QG+PG++           
Sbjct: 618 PGQRGPPGKDGEVGPAGPPGPSGVAGERGEQGPPGVNGF---QGLPGNQGPPGEPGKPGD 674

Query: 158 ----GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
               G+ GP G +G  G +GIPG+ G+ G           GL G  G+PG PG DG  G 
Sbjct: 675 QGIPGELGPVGQVGPRGERGIPGERGELG---------SSGLQGPKGIPGAPGPDGPKGS 725

Query: 214 NGMDGI------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G       PG  G+PG+ GI G  G  G++G  G +G+ G  G +G  GTP 
Sbjct: 726 PGPTGALGDMGPPGLQGMPGERGISGPPGPKGDRGAIGEKGSEGTPGNDGARGTPG 781



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 91/190 (47%), Gaps = 42/190 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--------------- 157
           G +GP G  G  G KG  G +G+ GE+G+ GV   PG +G PG +               
Sbjct: 586 GNRGPAGTMGVPGPKGFSGDQGKTGEQGSAGV---PGQRGPPGKDGEVGPAGPPGPSGVA 642

Query: 158 GKRGPKGDMGYPGPQGIPGDE---------------------GKRGPKGDMGYPGRIGLD 196
           G+RG +G  G  G QG+PG++                     G+ GP+G+ G PG  G  
Sbjct: 643 GERGEQGPPGVNGFQGLPGNQGPPGEPGKPGDQGIPGELGPVGQVGPRGERGIPGERGEL 702

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKS 253
           G  GL G  G+ G PG +G  G PG  G  G  G PG  G  GE+G++   GP+G+RG  
Sbjct: 703 GSSGLQGPKGIPGAPGPDGPKGSPGPTGALGDMGPPGLQGMPGERGISGPPGPKGDRGAI 762

Query: 254 GINGVPGTPA 263
           G  G  GTP 
Sbjct: 763 GEKGSEGTPG 772



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 66/131 (50%), Gaps = 12/131 (9%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ---GIP 154
            G   +T     PG +GP G  G  G  G  G +G+RG+ G  G++GP   PGP    G P
Sbjct: 1015 GVPGATGPRGDPGPEGPAGTDGPPGKDGLPGQRGDRGDLGPEGLIGPQGLPGPNGPVGAP 1074

Query: 155  GDEGK------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            GD GK      RGP+G  G  G +G+ G +G RG KGD+G  G  G  G  G  G  GL 
Sbjct: 1075 GDPGKRGEPGSRGPQGPPGQAGKRGLGGPQGPRGDKGDLGDHGERGQKGHRGFTGLQGLP 1134

Query: 209  GIPGRNGMDGI 219
            G PG  G  G 
Sbjct: 1135 GPPGTTGEQGA 1145



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 73/169 (43%), Gaps = 39/169 (23%)

Query: 101 GFCNSTKEYCPPGLQG------------PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP 148
           G   +  +  PPGLQG            P G +G IG KG  G  G  G +G PG VGP 
Sbjct: 727 GPTGALGDMGPPGLQGMPGERGISGPPGPKGDRGAIGEKGSEGTPGNDGARGTPGPVGPA 786

Query: 149 GPQGIPGDE------------GKRGPKGDMGYPGPQG---------------IPGDEGKR 181
           GP G  G++            G RG  G  G PGP G               + G+ G++
Sbjct: 787 GPAGPSGEKGEPGPKGPLGPPGSRGIHGARGDPGPIGAVGFAGPPGPDGQPGVKGEPGEQ 846

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           G KGD G PG  GL G  G  G  G+ G+ G  G  G PG  G PG  G
Sbjct: 847 GQKGDAGSPGPQGLAGAHGPHGPVGVAGLKGGRGTQGAPGPTGFPGSAG 895



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 64/131 (48%), Gaps = 27/131 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GPIG KGE G+ G  G  G RG  GAPG   P GP G+PG+ G+         PGP 
Sbjct: 283 GHAGPIGLKGETGSVGSKGATGGRGPMGAPG---PMGPAGMPGERGR---------PGPS 330

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDG------------RDGLPGEPGLDGIPGRNGMDGIP 220
           G+P   GKRG  G++G PG +G  G              G PG  G+ G  G  G  G  
Sbjct: 331 GVP---GKRGSPGNLGKPGPMGPLGLSGPPGYPGTPGMKGQPGPTGVRGPEGPQGQRGET 387

Query: 221 GKDGLPGKDGI 231
           G+ G PG  G+
Sbjct: 388 GRQGSPGPVGL 398



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 89/218 (40%), Gaps = 42/218 (19%)

Query: 88  LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
           L    ++     +G      E    GLQGP   KG  GA G  G KG  G  GA G +GP
Sbjct: 681 LGPVGQVGPRGERGIPGERGELGSSGLQGP---KGIPGAPGPDGPKGSPGPTGALGDMGP 737

Query: 148 PGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD-- 199
           PG QG+PG+ G  GP      +G +G  G +G PG++G RG  G +G  G  G  G    
Sbjct: 738 PGLQGMPGERGISGPPGPKGDRGAIGEKGSEGTPGNDGARGTPGPVGPAGPAGPSGEKGE 797

Query: 200 ----------------GLPGEPGLDG---------------IPGRNGMDGIPGKDGLPGK 228
                           G  G+PG  G               + G  G  G  G  G PG 
Sbjct: 798 PGPKGPLGPPGSRGIHGARGDPGPIGAVGFAGPPGPDGQPGVKGEPGEQGQKGDAGSPGP 857

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G+ G +G +G  G+ G +G RG  G  G  G P    
Sbjct: 858 QGLAGAHGPHGPVGVAGLKGGRGTQGAPGPTGFPGSAG 895



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 93/256 (36%), Gaps = 84/256 (32%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE------------------ 138
           V  +G          PG  GP G  GE G  G  GV G+RG                   
Sbjct: 297 VGSKGATGGRGPMGAPGPMGPAGMPGERGRPGPSGVPGKRGSPGNLGKPGPMGPLGLSGP 356

Query: 139 ---------KGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY------------------ 168
                    KG PG   V GP GPQG  G+ G++G  G +G                   
Sbjct: 357 PGYPGTPGMKGQPGPTGVRGPEGPQGQRGETGRQGSPGPVGLRGPVGGDGGPGTKGPVGN 416

Query: 169 ------------------------PGPQGIPGDEGKRGPKGD------------MGYPGR 192
                                   PG +G  GD G  G KGD             G  G 
Sbjct: 417 VGPQGPGGHSGPPGPPGPQGSTGQPGIKGQGGDVGVPGFKGDAGPKGEPGPPGSQGVIGP 476

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G +G+ GL G+PG  G  G  G  G PG  G PG DG+PG  G  G++G +GP G +G 
Sbjct: 477 QGEEGKRGLRGDPGSVGPIGPVGERGAPGNRGFPGADGLPGPKGAQGDRGTSGPPGPKGS 536

Query: 253 SGINGVPGTPAICAYK 268
            G  G PG P +   +
Sbjct: 537 LGDPGRPGEPGLPGAR 552



 Score = 45.8 bits (107), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 60/136 (44%), Gaps = 33/136 (24%)

Query: 152  GIPGDEGKR------------------------GPKGDMGYPGPQGIPGDEGKRGPKGDM 187
            G+PG  G+R                        GP G +G PG  G  GD G  GP G  
Sbjct: 976  GLPGQRGERGMPGLPGPGGPPGKQGAPGPSGDKGPSGPVGVPGATGPRGDPGPEGPAGTD 1035

Query: 188  GYPGRIGLDGR---------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G PG+ GL G+         +GL G  GL G  G  G  G PGK G PG  G  G  G  
Sbjct: 1036 GPPGKDGLPGQRGDRGDLGPEGLIGPQGLPGPNGPVGAPGDPGKRGEPGSRGPQGPPGQA 1095

Query: 239  GEKGMTGPRGNRGKSG 254
            G++G+ GP+G RG  G
Sbjct: 1096 GKRGLGGPQGPRGDKG 1111



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 79/190 (41%), Gaps = 54/190 (28%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEK---------GAPGVVGPPGPQGIPGD---------- 156
           GP G  G++G  G MG  G+RG +         G  G  G PG  G PG           
Sbjct: 214 GPQGSPGDVGEPGHMGPPGQRGPEGPPGKPGEDGEAGKAGNPGEVGFPGSAGPRGFPGTP 273

Query: 157 -----EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                +G RG  G +G  G  G  G +G  G +G MG PG +G  G   +PGE G     
Sbjct: 274 GPPGIKGHRGHAGPIGLKGETGSVGSKGATGGRGPMGAPGPMGPAG---MPGERG----- 325

Query: 212 GRNGMDGIPGKDGLPGKDGIP---------------------GTNGTNGEKGMTGPRGNR 250
            R G  G+PGK G PG  G P                     G  G  G +G  GP+G R
Sbjct: 326 -RPGPSGVPGKRGSPGNLGKPGPMGPLGLSGPPGYPGTPGMKGQPGPTGVRGPEGPQGQR 384

Query: 251 GKSGINGVPG 260
           G++G  G PG
Sbjct: 385 GETGRQGSPG 394



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 67/157 (42%), Gaps = 33/157 (21%)

Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKR---------GPKGDM 166
           GA+GE G +G         + G +G+PG VG PG  G PG  G           G  G  
Sbjct: 193 GARGEAGTRGPPGPNGSPGQAGPQGSPGDVGEPGHMGPPGQRGPEGPPGKPGEDGEAGKA 252

Query: 167 GYPGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G PG  G PG                +G RG  G +G  G  G  G  G  G  G  G P
Sbjct: 253 GNPGEVGFPGSAGPRGFPGTPGPPGIKGHRGHAGPIGLKGETGSVGSKGATGGRGPMGAP 312

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           G  G  G+PG+ G PG  G+PG  G+ G  G  GP G
Sbjct: 313 GPMGPAGMPGERGRPGPSGVPGKRGSPGNLGKPGPMG 349



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 53/124 (42%), Positives = 64/124 (51%), Gaps = 3/124 (2%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           +KG RG  G  G+ G  G  G  G  G RGP   MG PGP G  G  G+RG  G  G PG
Sbjct: 278 IKGHRGHAGPIGLKGETGSVGSKGATGGRGP---MGAPGPMGPAGMPGERGRPGPSGVPG 334

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           + G  G  G PG  G  G+ G  G  G PG  G PG  G+ G  G  G++G TG +G+ G
Sbjct: 335 KRGSPGNLGKPGPMGPLGLSGPPGYPGTPGMKGQPGPTGVRGPEGPQGQRGETGRQGSPG 394

Query: 252 KSGI 255
             G+
Sbjct: 395 PVGL 398



 Score = 39.3 bits (90), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 48/110 (43%), Gaps = 18/110 (16%)

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---- 225
           GPQG   +EGKRG +GD G  G IG  G  G PG  G  G       DG+PG  G     
Sbjct: 475 GPQG---EEGKRGLRGDPGSVGPIGPVGERGAPGNRGFPGA------DGLPGPKGAQGDR 525

Query: 226 -----PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                PG  G  G  G  GE G+ G RG  G  G+ G  G P       E
Sbjct: 526 GTSGPPGPKGSLGDPGRPGEPGLPGARGLTGTPGVQGAEGKPGPLGAPGE 575


>gi|200217|gb|AAA68101.1| pro-alpha-1 type II collagen [Mus musculus]
          Length = 1459

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/181 (42%), Positives = 90/181 (49%), Gaps = 30/181 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           P G  GP G  G+ GAKG+ G  G++G+ GAPG  GP   PGPQG  G  G +G +G  G
Sbjct: 804 PAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQG 863

Query: 168 YPGPQGIPGDEG---------------------KRGPKG---DMGYPGRI---GLDGRDG 200
            PG  G PG  G                     K GPKG   D G PGR    GL+G  G
Sbjct: 864 PPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLEGPAG 923

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGE G  G  G +G+DG PG  GL G+ GI G  G  GE+G  G  G  G+ G  G PG
Sbjct: 924 APGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 983

Query: 261 T 261
            
Sbjct: 984 A 984



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 88/189 (46%), Gaps = 39/189 (20%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 660 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPG 719

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G R               G KG+ G
Sbjct: 720 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEAG 779

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG  G  G  G PGEPG  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G
Sbjct: 780 PPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 839

Query: 249 NRGKSGING 257
             G  G  G
Sbjct: 840 PSGAPGPQG 848



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 86/196 (43%), Gaps = 48/196 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  GA+G  G  GE G  G  G  GPPG  G PG   D+G+ G KGD G P
Sbjct: 776 GEAGPPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAP 835

Query: 170 GPQG---IPGDEG------------KRGPKGDMGYPGRIGL------------------- 195
           GPQG    PG +G             +GP G  G+PG  G                    
Sbjct: 836 GPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPA 895

Query: 196 -----------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                       G  G  G+PGL+G  G  G  G PG DG  G DG PG  G  G++G+ 
Sbjct: 896 GKDGPKGVRGDSGPPGRAGDPGLEGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIV 955

Query: 245 GPRGNRGKSGINGVPG 260
           G  G RG+ G  G+PG
Sbjct: 956 GLPGQRGERGFPGLPG 971



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 88/190 (46%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPK--------- 163
           GP+G KG+ G  G  G KG++G KG     GP GPQG P   G+EGKRG +         
Sbjct: 419 GPLGPKGQAGEPGIAGFKGDQGPKG---ETGPAGPQGAPGPAGEEGKRGARGEPGGAGPI 475

Query: 164 ---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMD 217
              G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ 
Sbjct: 476 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLT 535

Query: 218 GIPG---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG                             G PG  G PG  G NGE G  G +G  
Sbjct: 536 GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLA 595

Query: 251 GKSGINGVPG 260
           G  G+ G+PG
Sbjct: 596 GAPGLRGLPG 605



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 87/209 (41%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGK------------- 159
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG +G              
Sbjct: 347 GEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 406

Query: 160 --------------------------------RGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                           +GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 407 GPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGEEGKRGAR 466

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 467 GEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 523

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 524 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 552



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 88/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 823  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGA 882

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G+ GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 883  NGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLEGPAGAPGEKGEPGDDGPSGLDGP 942

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 943  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1002

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1003 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1033



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 97/240 (40%), Gaps = 75/240 (31%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 720 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEAG 779

Query: 141 APGV---------------VGPPGPQGIP------------GDEGKRGPKGDMGYPGPQG 173
            PG                 GPPGP G              GD+G+ G KGD G PGPQG
Sbjct: 780 PPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 839

Query: 174 IPGDEGKRGP---------KGDMGYPGRIGLDG------------------------RDG 200
             G  G +GP         +G  G PG  G  G                        +DG
Sbjct: 840 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDG 899

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ GI G+PG
Sbjct: 900 PKGVRGDSGPPGRAGDPGLEGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPG 959



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 88/209 (42%), Gaps = 60/209 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 494 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 553

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM- 216
                         +G PG  G  GPKG  G PG+ G     GL G PGL G+PG++G  
Sbjct: 554 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAG---EKGLAGAPGLRGLPGKDGET 610

Query: 217 -----------------DGIPGKD---------------------GLPGKDGIPGTNGTN 238
                             G PG                       G+PG+ G PG  G  
Sbjct: 611 GAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPR 670

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAI 264
           GE+G  G RG+ G  G+    G+PGTP  
Sbjct: 671 GERGFPGERGSPGAQGLQGPRGLPGTPGT 699



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 75/169 (44%), Gaps = 36/169 (21%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 722 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 775

Query: 164 GDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G+ G PGP      +G PG+ G+ GP G  G+ G  G DG+ G  G+          G  
Sbjct: 776 GEAGPPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGD---------QGEA 826

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G  G  G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 827 GQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 875



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 89/223 (39%), Gaps = 72/223 (32%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------------VGPPGP- 150
           G  GP G  GE G  GE G+ G  G +G PG                       G PGP 
Sbjct: 575 GFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQGAPGPS 634

Query: 151 --------------------QGIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDM 187
                               QGIPG+ G  G   P+G+ G+PG +G PG +G +GP+G  
Sbjct: 635 GFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLP 694

Query: 188 GYPGRIGLDGR---------------DGLPGEPGLDGIPGRNGMDG---IPGKDGLPGKD 229
           G PG  G  G                 G+PGE G  GI G  G  G     G +G PGKD
Sbjct: 695 GTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKD 754

Query: 230 GIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G           G NGEKG  GP G  G +G  G PG P 
Sbjct: 755 GGRGLTGPIGPPGPAGANGEKGEAGPPGPSGSTGARGAPGEPG 797



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 80/189 (42%), Gaps = 54/189 (28%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKG 164
            PPG  G  G +G  GA GE   KGE G+ G  G+ GPPGPQG+ G  G      +RG +G
Sbjct: 909  PPGRAGDPGLEGPAGAPGE---KGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERG 965

Query: 165  DMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDG 209
              G PGP G PG +G  G  GD                G PGR G          PG DG
Sbjct: 966  FPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADG 1016

Query: 210  IPGRNGMDGIPGKDG---------------------LPGKDGIPGTNGTNGEKGMTGPRG 248
             PGR+G  G+ G  G                       GK G  G  G  G  G +GP G
Sbjct: 1017 PPGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAG 1076

Query: 249  NRGKSGING 257
             RG +G  G
Sbjct: 1077 ARGIAGPQG 1085



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 75/189 (39%), Gaps = 57/189 (30%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G       +G PG+ G  GP G  G PG  GIPG +G       
Sbjct: 346 KGEAGPTGARGPEGAQGS------RGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 399

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GE    G  G PG  G 
Sbjct: 400 AGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGE 459

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 460 EGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 519

Query: 256 NGVPGTPAI 264
            G PG P +
Sbjct: 520 PGRPGEPGL 528



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 79/223 (35%), Gaps = 81/223 (36%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG---------EKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GP+G +G  G  G  GVKG RG         E GAPGV G     G PG+ G  GP 
Sbjct: 239 GLPGPMGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGE---SGSPGENGSPGPM 295

Query: 164 GDMGYPG------------------------------------------PQGIPGDEGKR 181
           G  G PG                                           +G  G  G R
Sbjct: 296 GPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGAR 355

Query: 182 GP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG----------------- 221
           GP   +G  G PG  G  G  G  G PG DGIPG  G  G PG                 
Sbjct: 356 GPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ 415

Query: 222 -------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                    G  G+ GI G  G  G KG TGP G +G  G  G
Sbjct: 416 GATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAG 458



 Score = 46.2 bits (108), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 83/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 256 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 315

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +G +G+ G PG  G 
Sbjct: 316 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGP 375

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 376 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGI 432

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 433 AGFKGDQGPKGETGPAGPQGAPG-PAGEEGKR 463



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 53/114 (46%), Gaps = 24/114 (21%)

Query: 133 KGERGEKGAPGVVGPP---------------GPQGIPGDEGKR---GPKGDMGYPGPQGI 174
           +G  GE G PGV GP                G  G PG  G+R   GP G  G+PG  G+
Sbjct: 196 QGNPGEPGEPGVSGPMGPRGPPGPAGKPGDDGEAGKPGKSGERGLPGPMGARGFPGTPGL 255

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG +G R      GYPG  G  G  G PG  G  G PG NG  G  G  GLPG+
Sbjct: 256 PGVKGHR------GYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGE 303


>gi|21431495|sp|P12105.2|CO3A1_CHICK RecName: Full=Collagen alpha-1(III) chain; Flags: Precursor
          Length = 1262

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 86/179 (48%), Gaps = 42/179 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G+ G+ GAKG+ G KGERGE G PG  GP      PG+EGKRG  G+   PG 
Sbjct: 424 PGAKGTPGEPGKNGAKGDPGPKGERGENGTPGARGP------PGEEGKRGANGE---PGQ 474

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------PGLDGIPGRNGM 216
            G+PG  G+RG  G  G PG  GL G  G  GE                G DG PG  GM
Sbjct: 475 NGVPGTPGERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGPAGDRGQDGGPGLPGM 534

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEK------------------GMTGPRGNRGKSGING 257
            G+PG  G PG DG PG  G  GE                   G  GP+GN G  G NG
Sbjct: 535 RGLPGIPGSPGSDGKPGPPGNQGEPGRSGPPGPAGPRGQPGVMGFPGPKGNEGAPGKNG 593



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 67/142 (47%), Gaps = 33/142 (23%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           G  GA G  G PG  G  GD G +G +G+ G PG +G PG+EGKRG  G           
Sbjct: 422 GNPGAKGTPGEPGKNGAKGDPGPKGERGENGTPGARGPPGEEGKRGANG----------- 470

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---------------K 241
                  EPG +G+PG  G  G PG  GLPG +G+PG  G  GE               +
Sbjct: 471 -------EPGQNGVPGTPGERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGPAGDR 523

Query: 242 GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G  G+ G+PG+P 
Sbjct: 524 GQDGGPGLPGMRGLPGIPGSPG 545



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 42/78 (53%), Gaps = 6/78 (7%)

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G  GP G  G PGR G +G  G+PG PG  G PG   M G+PG  G  G D   G +G  
Sbjct: 221 GPAGPPGKDGEPGRPGRNGDRGIPGLPGHKGHPG---MPGMPGMKGARGFD---GKDGAK 274

Query: 239 GEKGMTGPRGNRGKSGIN 256
           G+ G  GP+G  G+ G N
Sbjct: 275 GDSGAPGPKGEAGQPGAN 292



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 21/102 (20%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG +G PG+ GK G KGD                      G  G  G +G PG  G P
Sbjct: 422 GNPGAKGTPGEPGKNGAKGD---------------------PGPKGERGENGTPGARGPP 460

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G++G  G NG  G+ G+ G  G RG  G  G+PG+  +   K
Sbjct: 461 GEEGKRGANGEPGQNGVPGTPGERGSPGFRGLPGSNGLPGEK 502



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 39/69 (56%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  G  G+ G  G  G+ G+ G  G KG PG+ G PG +G  G +GK G KGD G PG
Sbjct: 222 PAGPPGKDGEPGRPGRNGDRGIPGLPGHKGHPGMPGMPGMKGARGFDGKDGAKGDSGAPG 281

Query: 171 PQGIPGDEG 179
           P+G  G  G
Sbjct: 282 PKGEAGQPG 290



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G  GP G  G+ G+ G  GD G PG  G  G  G+PG PG+ G  G +G DG  G  G 
Sbjct: 220 IGPAGPPGKDGEPGRPGRNGDRGIPGLPGHKGHPGMPGMPGMKGARGFDGKDGAKGDSGA 279

Query: 226 PG---KDGIPGTNGT 237
           PG   + G PG NG+
Sbjct: 280 PGPKGEAGQPGANGS 294


>gi|119585299|gb|EAW64895.1| collagen, type VII, alpha 1 (epidermolysis bullosa, dystrophic,
           dominant and recessive), isoform CRA_c [Homo sapiens]
          Length = 609

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 94/188 (50%), Gaps = 46/188 (24%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKGDMGYP 169
           P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G          KGDMG  
Sbjct: 156 PRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGA---------KGDMGER 206

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP------------GRNGMD 217
           GP+G+ GD   +GP+GD G PG  G        GEPG  G              G+ G  
Sbjct: 207 GPRGLDGD---KGPRGDNGDPGDKGSK------GEPGDKGSAGLPGLRGLLGPQGQPGAA 257

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV---------------PGTP 262
           GIPG  G PGKDG+PG  G  G+ G  GPRG +G+ G+ G                PG P
Sbjct: 258 GIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRP 317

Query: 263 AICAYKRE 270
            +  +K E
Sbjct: 318 GLAGHKGE 325



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 92/171 (53%), Gaps = 21/171 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------------PGVVGPPGPQG 152
           E  P GL G  G +G+ G  G+ G KGE G+KG+               PG  G PG  G
Sbjct: 205 ERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPG 264

Query: 153 IPGDEGK---RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            PG +G    RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G PG PGL G
Sbjct: 265 SPGKDGVPGIRGEKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGPPGRPGLAG 321

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G  G PG
Sbjct: 322 HKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 372



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 107/259 (41%), Gaps = 37/259 (14%)

Query: 25  PIISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNP 84
           P  +K ++  R  R +D DKG   DN  P     +  P D         +          
Sbjct: 196 PRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPG 255

Query: 85  WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
              +      P     G      E    G  GP G KGE G KG  G+ GE+G+KG    
Sbjct: 256 AAGIPGDPGSP--GKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGE--- 310

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            GPPG    PG  G +G  G+ G PG  G PG EG  GPKGD G+ G+ G  G  G  GE
Sbjct: 311 AGPPG---RPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGE 367

Query: 205 ---PGLDGIPGRNGMD---------------------GIPGKDGLPGK-----DGIPGTN 235
              PG+ G PG +G D                     G  G+ G PG+      G+PG  
Sbjct: 368 RGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAP 427

Query: 236 GTNGEKGMTGPRGNRGKSG 254
           G  GE+G  GP G RG+ G
Sbjct: 428 GERGEQGRPGPAGPRGEKG 446



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 77/163 (47%), Gaps = 32/163 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  G KGE G  G  G+ G +GE G PGV   PG  G PG EG  GPKGD G+    
Sbjct: 300 GLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGV---PGQSGAPGKEGLIGPKGDRGF---- 352

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------------------GIPGRN 214
                +G+ GPKGD G  G  G  G  G PG  G D                  G+ G+ 
Sbjct: 353 -----DGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQK 407

Query: 215 GMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G  G PG+   G PG  G PG  G  G  G  GPRG +G++ +
Sbjct: 408 GERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAAL 450



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 74/157 (47%), Gaps = 29/157 (18%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGP------- 147
            ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG   ++GP       
Sbjct: 294 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 353

Query: 148 --PGPQGIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRGPKGDMGYP 190
             PGP+G  G++G+RG  G  G+PGP G                 G EG +G KG+ G P
Sbjct: 354 GQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPP 413

Query: 191 GR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           G   +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 414 GERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAAL 450



 Score = 46.2 bits (108), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 68/143 (47%), Gaps = 40/143 (27%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKR--------------- 181
           GAPGVVG PG         + GP+G+MG PGP   +G+ G  G+                
Sbjct: 63  GAPGVVGFPG---------QTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSV 113

Query: 182 ------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                 G KGD G PG +GL G  G  GEPG+       G DG PG++G  G  G PG+ 
Sbjct: 114 GPPGASGLKGDKGDPG-VGLPGPRGERGEPGI------RGEDGRPGQEGPRGLTGPPGSR 166

Query: 236 GTNGEKGMTGPRGNRGKSGINGV 258
           G  GEKG  G  G +G  G + V
Sbjct: 167 GERGEKGDVGSAGLKGDKGDSAV 189



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 77/171 (45%), Gaps = 32/171 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ-------------------- 151
           PG  G +G  G+ G +GEMG  G  GE+G   + GPPG +                    
Sbjct: 62  PGAPGVVGFPGQTGPRGEMGQPGPSGERG---LAGPPGREGIPGPLGPPGPPGSVGPPGA 118

Query: 152 -GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+ GD+G  G    +G PGP+G  G+ G RG  G  G  G  GL G  G  GE G  G 
Sbjct: 119 SGLKGDKGDPG----VGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGD 174

Query: 211 PGRNGMDGIPGKD----GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G+ G  G      G PG  G  G  G  G +G+ G +G RG +G  G
Sbjct: 175 VGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPG 225


>gi|326918160|ref|XP_003205359.1| PREDICTED: hypothetical protein LOC100539194 [Meleagris gallopavo]
          Length = 1584

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 84/158 (53%), Gaps = 27/158 (17%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDM 166
           CPPG   P G +G IG +G  G KGE G +G PG      P+G  G+ G+   RG KG+ 
Sbjct: 475 CPPG---PKGDRGSIGPEGPKGQKGESGSQGLPG------PRGEKGESGRAYGRGEKGEK 525

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G P   G+PG  GK G KG+ G             PG+PG  G+PG  G  G  GK G P
Sbjct: 526 GSP---GLPGTPGKDGAKGEAGE------------PGQPGAFGLPGPAGPKGSEGKQGPP 570

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G  G  G  GE+G  G RG++G+ G++G PG P +
Sbjct: 571 GIKGYIGAPGLQGERGEKGTRGDKGERGLDGFPGKPGV 608



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 76/144 (52%), Gaps = 12/144 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK------------GAPGVVGPPGPQGIPGDEGK 159
            PG  G  G  G+ GA+G  G KG+RG+             G  G  GPPG  G  G  G 
Sbjct: 1215 PGKPGEPGLPGQEGARGLPGFKGQRGDTGPPGPRGEPGATGPAGREGPPGKDGDTGPIGP 1274

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +GP+G  G PG  G+PG  G+ GP G+ G  G  G +G  GLPG  G  G PG  G  G+
Sbjct: 1275 QGPRGLRGQPGKNGLPGSAGEPGPAGNPGPKGNKGENGSPGLPGFIGPRGPPGDPGEKGL 1334

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGM 243
            PGK+G PGK G  G+ G  GE G+
Sbjct: 1335 PGKEGAPGKPGETGSKGERGEPGI 1358



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 84/196 (42%), Gaps = 57/196 (29%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPG---------------------PQGIPGD---- 156
            G+ GAKG+ G+ G+ GEKG  G  G PG                     P G PGD    
Sbjct: 1123 GQKGAKGDRGITGDAGEKGEQGHPGMPGFAGAPGNPGPPGPDGAPGPIGPAGNPGDIGKD 1182

Query: 157  --------------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG-- 194
                                +GK G  G +G PG  G PG  G+ G +G  G+ G+ G  
Sbjct: 1183 GPPGPQGPPGVPGLPGIAGNDGKDGKPGSLGKPGKPGEPGLPGQEGARGLPGFKGQRGDT 1242

Query: 195  ----------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                        G  G  G PG DG  G  G  G  G  G PGK+G+PG+ G  G  G  
Sbjct: 1243 GPPGPRGEPGATGPAGREGPPGKDGDTGPIGPQGPRGLRGQPGKNGLPGSAGEPGPAGNP 1302

Query: 245  GPRGNRGKSGINGVPG 260
            GP+GN+G++G  G+PG
Sbjct: 1303 GPKGNKGENGSPGLPG 1318



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 28/138 (20%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------ 149
           L    G   S  +  PPG++G IG  G  G +GE G +G++GE+G  G  G PG      
Sbjct: 554 LPGPAGPKGSEGKQGPPGIKGYIGAPGLQGERGEKGTRGDKGERGLDGFPGKPGVEGKQG 613

Query: 150 -------------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                               +G+ G++G+ GP+G  G PG  G+PG+ G  G  G  G P
Sbjct: 614 PAGSPGPPGGSGPKGEKVPTEGLKGEQGEPGPRGPQGQPGLPGLPGEAGLEGKPGAPGLP 673

Query: 191 GRIGLDGRDGLPGEPGLD 208
           G+    G+ G PG PG++
Sbjct: 674 GQ---RGKKGEPGFPGIN 688



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 52/121 (42%), Gaps = 21/121 (17%)

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           PPGP+G  G  G  GPKG  G  G QG+PG      P+G+ G  GR    G  G  G PG
Sbjct: 476 PPGPKGDRGSIGPEGPKGQKGESGSQGLPG------PRGEKGESGRAYGRGEKGEKGSPG 529

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           L G                PGKDG  G  G  G+ G  G  G  G  G  G  G P I  
Sbjct: 530 LPGT---------------PGKDGAKGEAGEPGQPGAFGLPGPAGPKGSEGKQGPPGIKG 574

Query: 267 Y 267
           Y
Sbjct: 575 Y 575



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 12/97 (12%)

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG---------IPGKDG 224
            I G++GK G  G +G PG+    G  GLPG+ G  G+PG  G  G          PG  G
Sbjct: 1199 IAGNDGKDGKPGSLGKPGK---PGEPGLPGQEGARGLPGFKGQRGDTGPPGPRGEPGATG 1255

Query: 225  LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G++G PG +G  G  G  GPRG RG+ G NG+PG+
Sbjct: 1256 PAGREGPPGKDGDTGPIGPQGPRGLRGQPGKNGLPGS 1292



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 67/138 (48%), Gaps = 25/138 (18%)

Query: 131 GVKGERGEKG-------------------APGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           G+KGERGEKG                    P + G PGP+G  GD      +G  G PG 
Sbjct: 809 GLKGERGEKGDTGSPGPPGTPGTTAFFTPHPRIPGEPGPKGEKGD------RGTSGEPGL 862

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            GIPG++G  GP G  G  G+ G  G  G PGE G  G  G  G  G+PG  G+PG  G+
Sbjct: 863 PGIPGEQGVPGPVGLQGTKGQKGARGEAGAPGEAGAVGPVGPPGPRGLPGNVGVPGNPGL 922

Query: 232 PGTNGTNGEKGMTGPRGN 249
           PG  G  GEKG  G  G 
Sbjct: 923 PGKEGERGEKGDPGKEGK 940



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 56/115 (48%), Gaps = 30/115 (26%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           GE G KGE   KG+RG  G PG+ G PG QG+               PGP G+ G +G++
Sbjct: 843 GEPGPKGE---KGDRGTSGEPGLPGIPGEQGV---------------PGPVGLQGTKGQK 884

Query: 182 GPKGDMGYPGRIGLDGRD------------GLPGEPGLDGIPGRNGMDGIPGKDG 224
           G +G+ G PG  G  G              G+PG PGL G  G  G  G PGK+G
Sbjct: 885 GARGEAGAPGEAGAVGPVGPPGPRGLPGNVGVPGNPGLPGKEGERGEKGDPGKEG 939



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 18/109 (16%)

Query: 111  PPGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            P G +GP G+ G+   IG +G  G++G+ G+ G PG  G PGP G PG +G    KG+ G
Sbjct: 1256 PAGREGPPGKDGDTGPIGPQGPRGLRGQPGKNGLPGSAGEPGPAGNPGPKGN---KGENG 1312

Query: 168  YPGPQGIPG---------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             P   G+PG         D G++G  G  G PG+ G  G  G  GEPG+
Sbjct: 1313 SP---GLPGFIGPRGPPGDPGEKGLPGKEGAPGKPGETGSKGERGEPGI 1358



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 50/134 (37%), Gaps = 46/134 (34%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG----------------------------- 197
           G  GP+G PG  G+ G +G++G PG  GL G                             
Sbjct: 761 GKAGPKGEPGGRGQPGEQGEVGLPGLQGLPGLRGEKGDQGGKGKDGLPGLKGERGEKGDT 820

Query: 198 -----------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                               +PGEPG  G  G  G  G PG  G+PG+ G+PG  G  G 
Sbjct: 821 GSPGPPGTPGTTAFFTPHPRIPGEPGPKGEKGDRGTSGEPGLPGIPGEQGVPGPVGLQGT 880

Query: 241 KGMTGPRGNRGKSG 254
           KG  G RG  G  G
Sbjct: 881 KGQKGARGEAGAPG 894


>gi|391346529|ref|XP_003747525.1| PREDICTED: collagen alpha-3(V) chain [Metaseiulus occidentalis]
          Length = 1629

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 91/178 (51%), Gaps = 39/178 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG------------------ERGEKGAPGVVGPPGPQGIP 154
           G+ GP GQKG++G KG+ G +G                   RGE+GAPG++G  G QG+P
Sbjct: 606 GIIGPEGQKGDVGPKGDTGPQGLDGAQGAEGLEGPKGFDGVRGERGAPGLLGEKGKQGVP 665

Query: 155 GDEG---KRGPKGDMGYPGP------------QGIPGDEGKRGPKGDMGY---PGRIGLD 196
           G  G     GPKG+ G+ GP            QG+PG+ G  GP+G+ G    PG+ G  
Sbjct: 666 GFPGYPGANGPKGEKGFQGPPGPKGFKGDRGLQGVPGERGPMGPRGNRGLRGRPGKTGHT 725

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G  GEPG  G PG  G  G  G  G    +G+PGT G  G+ G  GP G RG +G
Sbjct: 726 GEKGSVGEPGSPGQPGERGEQGPEGPRGF---NGVPGTPGNPGKDGHVGPSGERGSAG 780



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 89/176 (50%), Gaps = 30/176 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE------------KGAPGVVGPPGPQGIPG---- 155
           PG+ GPIG  G  G  G  G+ G  G             KG  G +GP GP G PG    
Sbjct: 530 PGIPGPIGSPGPRGKPGLPGLPGAEGLPGSSGSPGSPGIKGDVGFIGPQGPVGFPGQRGY 589

Query: 156 --DEGKRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             D+G RGP   KGD G  GP+G  GD    GPKGD G  G  G  G +GL G  G DG+
Sbjct: 590 KGDQGVRGPSGVKGDKGIIGPEGQKGD---VGPKGDTGPQGLDGAQGAEGLEGPKGFDGV 646

Query: 211 PGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPG 260
            G  G  G+    GK G+PG  G PG NG  GEKG     GP+G +G  G+ GVPG
Sbjct: 647 RGERGAPGLLGEKGKQGVPGFPGYPGANGPKGEKGFQGPPGPKGFKGDRGLQGVPG 702



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 83/148 (56%), Gaps = 3/148 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP+G  G+ G KG+ GV+G  G KG  G++GP G +G  G +G  GP+G  G  G +
Sbjct: 576 GPQGPVGFPGQRGYKGDQGVRGPSGVKGDKGIIGPEGQKGDVGPKGDTGPQGLDGAQGAE 635

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+ G +G  G +G+ G PG +G  G+ G+PG PG    PG NG  G  G  G PG  G  
Sbjct: 636 GLEGPKGFDGVRGERGAPGLLGEKGKQGVPGFPGY---PGANGPKGEKGFQGPPGPKGFK 692

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  GP G RG  G+ G PG
Sbjct: 693 GDRGLQGVPGERGPMGPRGNRGLRGRPG 720



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  GE G  G++G  G+ G  G+PG VG PG +G  G+ GKRG KGD      +GIPG  
Sbjct: 1233 GLPGEAGVAGDVGAPGKAGPAGSPGAVGAPGERGEKGERGKRGWKGD------RGIPGKS 1286

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G++G  G+ G  G  G  G  G  G+PG+ G  G+ G DG PG  GL G  G  G++G  
Sbjct: 1287 GRKGDFGEKGEKGDTGPAGPVGQTGKPGIQGFEGQKGADGPPGSPGLEGPVGPKGSDGAT 1346

Query: 239  GEKGMT 244
            G KG T
Sbjct: 1347 GPKGET 1352



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/104 (51%), Positives = 60/104 (57%), Gaps = 6/104 (5%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           GE GV+G RG +G PG  G  G +G  G EGKRGP G MG  G QG PG  G  G KGD 
Sbjct: 381 GETGVEGARGPRGHPGSPGKMGRRGQSGKEGKRGPTGPMGQKGEQGHPGHPGLPGDKGDR 440

Query: 188 GY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           GY   PG  GL G DG  GEPG  G P   G+ G  G+ G PG+
Sbjct: 441 GYQGNPGEAGLMGSDGPKGEPGPSGSP---GLTGEMGQRGFPGQ 481



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 85/205 (41%), Gaps = 57/205 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
            G +G  G KG+ G  G +G  G RGE G PG +G PGP G  G  G +G           
Sbjct: 960  GQKGSKGSKGDSGPTGPIGPIGLRGEPGTPGAIGEPGPTGSHGARGVKGEEGPIGPPGPS 1019

Query: 162  ----PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRN 214
                 +G  G  G +GI GD+GK GP G  G PG  GL    G DG+ G  G  G+ G+ 
Sbjct: 1020 GAPGKQGIPGLTGEKGIKGDDGKLGPPGSAGQPGEPGLAGPKGNDGIAGPTGPSGLRGQK 1079

Query: 215  GMDGIPGKDGLPGKD---------------------------------------GIPGTN 235
            G DG PG  G  GKD                                       G PG  
Sbjct: 1080 GEDGKPGAAGTAGKDGPIGPVGPPGPKGEEGKAGIPGPSGPRGPPGIEGPKGNPGAPGFP 1139

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPG 260
            G  GE G  G +G  G +G+NG PG
Sbjct: 1140 GVAGEAGKPGAKGEPGANGVNGAPG 1164



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 81/148 (54%), Gaps = 6/148 (4%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G KG++GA G+ G KG +G+ G  G +GP G +G PG  G       +G PGP G  G  
Sbjct: 951  GDKGDVGAAGQKGSKGSKGDSGPTGPIGPIGLRGEPGTPGA------IGEPGPTGSHGAR 1004

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G +G +G +G PG  G  G+ G+PG  G  GI G +G  G PG  G PG+ G+ G  G +
Sbjct: 1005 GVKGEEGPIGPPGPSGAPGKQGIPGLTGEKGIKGDDGKLGPPGSAGQPGEPGLAGPKGND 1064

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G  G TGP G RG+ G +G PG      
Sbjct: 1065 GIAGPTGPSGLRGQKGEDGKPGAAGTAG 1092



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 64/117 (54%), Gaps = 12/117 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------QGIPGDEGKRGPKGD 165
           PG  GP G+KG  G  G  G KG+RG +G PG  GP GP      +G PG  G  G KG 
Sbjct: 671 PGANGPKGEKGFQGPPGPKGFKGDRGLQGVPGERGPMGPRGNRGLRGRPGKTGHTGEKGS 730

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           +G PG  G PG+ G++GP+G  G+      +G  G PG PG DG  G +G  G  G+
Sbjct: 731 VGEPGSPGQPGERGEQGPEGPRGF------NGVPGTPGNPGKDGHVGPSGERGSAGE 781



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 93/217 (42%), Gaps = 48/217 (22%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG---------------------ERGEKGAPGVVGPPGP 150
            PG  G  G+ G+ GAKGE G  G                     + G  G PG VGP G 
Sbjct: 1136 PGFPGVAGEAGKPGAKGEPGANGVNGAPGDIGPPGPQGEPGKMGDTGSPGKPGAVGPAGA 1195

Query: 151  QG------IPGDEGK------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            QG      I GD+G+       GP G  G  GP G PG  G+ G  GD+G PG+ G  G 
Sbjct: 1196 QGDTGLPGIKGDKGEVGPKGPHGPLGPPGAMGPTGSPGLPGEAGVAGDVGAPGKAGPAGS 1255

Query: 199  DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------ 246
             G  G PG  G  G  G  G  G  G+PGK G  G  G  GEKG TGP            
Sbjct: 1256 PGAVGAPGERGEKGERGKRGWKGDRGIPGKSGRKGDFGEKGEKGDTGPAGPVGQTGKPGI 1315

Query: 247  RGNRGKSGINGVPGTPAI---CAYKRESCSLLPNSET 280
            +G  G+ G +G PG+P +      K    +  P  ET
Sbjct: 1316 QGFEGQKGADGPPGSPGLEGPVGPKGSDGATGPKGET 1352



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 93/216 (43%), Gaps = 66/216 (30%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP------------GVVGP---PGPQG 152
            E   PG +G  G KGEIG  G +G +GE+G  GAP            GV+GP   PGP+G
Sbjct: 856  ETGAPGPRGHPGGKGEIGLTGAVGPQGEKGALGAPGEPGPPGERGRQGVIGPQGTPGPKG 915

Query: 153  IPGDEGKRGPKGDMGYPGPQGI---------------------PGDEGKRGPKGDMGYPG 191
              GD G  G  G  G PG +G+                      G +G +G KGD G  G
Sbjct: 916  DKGDIGVPGSAGRDGLPGSRGLPGSPGPSGGPGEDGDKGDVGAAGQKGSKGSKGDSGPTG 975

Query: 192  RIGLDGRDGLPGEPGLDGIPG---------------------------RNGMDGIPGKDG 224
             IG  G  G PG PG  G PG                           + G+ G+ G+ G
Sbjct: 976  PIGPIGLRGEPGTPGAIGEPGPTGSHGARGVKGEEGPIGPPGPSGAPGKQGIPGLTGEKG 1035

Query: 225  LPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGING 257
            + G DG    PG+ G  GE G+ GP+GN G +G  G
Sbjct: 1036 IKGDDGKLGPPGSAGQPGEPGLAGPKGNDGIAGPTG 1071



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 86/224 (38%), Gaps = 78/224 (34%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE------------------------RGEKGAPGVVGP 147
            PG  G IG+ G  G+ G  GVKGE                        +G KG  G +GP
Sbjct: 986  PGTPGAIGEPGPTGSHGARGVKGEEGPIGPPGPSGAPGKQGIPGLTGEKGIKGDDGKLGP 1045

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD-------- 199
            PG  G PG+ G  GPKG+ G  GP G     G RG KG+ G PG  G  G+D        
Sbjct: 1046 PGSAGQPGEPGLAGPKGNDGIAGPTG---PSGLRGQKGEDGKPGAAGTAGKDGPIGPVGP 1102

Query: 200  -------------------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
                                     G  G PG  G PG  G  G PG  G PG +G+ G 
Sbjct: 1103 PGPKGEEGKAGIPGPSGPRGPPGIEGPKGNPGAPGFPGVAGEAGKPGAKGEPGANGVNGA 1162

Query: 235  ------------------NGTNGEKGMTGPRGNRGKSGINGVPG 260
                               G+ G+ G  GP G +G +G+ G+ G
Sbjct: 1163 PGDIGPPGPQGEPGKMGDTGSPGKPGAVGPAGAQGDTGLPGIKG 1206



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 63/208 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDM 166
           G  GP+GQKGE G  G  G+   KG+RG +G PG   ++G  GP+G PG  G  G  G+M
Sbjct: 414 GPTGPMGQKGEQGHPGHPGLPGDKGDRGYQGNPGEAGLMGSDGPKGEPGPSGSPGLTGEM 473

Query: 167 ---GYPGPQ------------------GIPGDE------------GKRGPKGDMGYPGRI 193
              G+PG +                  G  G+E            G+ GP G  G PG  
Sbjct: 474 GQRGFPGQRGHSGPPGPPGIPGSEGPMGSKGNEGPPGAPGQPGHVGQSGPMGPQGSPGIP 533

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMD------------------------GIPGKDGLPGKD 229
           G  G  G  G+PGL G+PG  G+                         G PG+ G  G  
Sbjct: 534 GPIGSPGPRGKPGLPGLPGAEGLPGSSGSPGSPGIKGDVGFIGPQGPVGFPGQRGYKGDQ 593

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G+ G +G  G+KG+ GP G +G  G  G
Sbjct: 594 GVRGPSGVKGDKGIIGPEGQKGDVGPKG 621



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 78/189 (41%), Gaps = 45/189 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP+G +G  G +G  G  G  GEKG+ G  G PG  G  G++G  GP+G  G PG 
Sbjct: 701 PGERGPMGPRGNRGLRGRPGKTGHTGEKGSVGEPGSPGQPGERGEQGPEGPRGFNGVPGT 760

Query: 172 QGIPGDEGKRGPKGDMGYPG---------------------RIGLDG------------R 198
            G PG +G  GP G+ G  G                      IG  G             
Sbjct: 761 PGNPGKDGHVGPSGERGSAGEPGVAGPIGPPGPVGLPGPNGEIGKTGEIGPPGPVGVPGE 820

Query: 199 DGLPGEPGLDGIPGRNGMDGIPG------------KDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGE G DG  G  G  G PG            + G PG  G PG  G  G  G  GP
Sbjct: 821 TGPPGETGKDGPAGVVGHPGEPGVMGPPGLAGPPGETGAPGPRGHPGGKGEIGLTGAVGP 880

Query: 247 RGNRGKSGI 255
           +G +G  G 
Sbjct: 881 QGEKGALGA 889



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 83/188 (44%), Gaps = 51/188 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGYP 169
            G+ G  G+KG  G  G++G  G  G+ G PG+ GP G  GI G  G    RG KG+ G P
Sbjct: 1026 GIPGLTGEKGIKGDDGKLGPPGSAGQPGEPGLAGPKGNDGIAGPTGPSGLRGQKGEDGKP 1085

Query: 170  GPQGIPG---------------DEGK---------------RGPKGDMGYPGRIGLDGRD 199
            G  G  G               +EGK                GPKG+ G PG  G+ G  
Sbjct: 1086 GAAGTAGKDGPIGPVGPPGPKGEEGKAGIPGPSGPRGPPGIEGPKGNPGAPGFPGVAGEA 1145

Query: 200  GLPGEPGLDGIPGRNGMDGIP---------------GKDGLPGKDGIPGTNGTNGEKGMT 244
            G   +PG  G PG NG++G P               G  G PGK G  G  G  G+ G+ 
Sbjct: 1146 G---KPGAKGEPGANGVNGAPGDIGPPGPQGEPGKMGDTGSPGKPGAVGPAGAQGDTGLP 1202

Query: 245  GPRGNRGK 252
            G +G++G+
Sbjct: 1203 GIKGDKGE 1210



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 85/183 (46%), Gaps = 33/183 (18%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
           E  PPG  G  G  G +G  GE GV       G  GE GAPG  G PG +G  G  G  G
Sbjct: 820 ETGPPGETGKDGPAGVVGHPGEPGVMGPPGLAGPPGETGAPGPRGHPGGKGEIGLTGAVG 879

Query: 162 PKGD------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           P+G+                   G  GPQG PG +G    KGD+G PG     GRDGLPG
Sbjct: 880 PQGEKGALGAPGEPGPPGERGRQGVIGPQGTPGPKGD---KGDIGVPGSA---GRDGLPG 933

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             GL G     G  G PG+DG  G  G  G  G+ G KG +GP G  G  G+ G PGTP 
Sbjct: 934 SRGLPGS---PGPSGGPGEDGDKGDVGAAGQKGSKGSKGDSGPTGPIGPIGLRGEPGTPG 990

Query: 264 ICA 266
              
Sbjct: 991 AIG 993



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 87/203 (42%), Gaps = 48/203 (23%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDMGYPGPQ 172
            G KG  GA G  GV GE G+ GA G  G  G  G PGD      +G+ G  GD G PG  
Sbjct: 1128 GPKGNPGAPGFPGVAGEAGKPGAKGEPGANGVNGAPGDIGPPGPQGEPGKMGDTGSPG-- 1185

Query: 173  GIPGDEGKRGPKGDMGYPG---------------------RIGLDGRDGLPGEPGLD--- 208
              PG  G  G +GD G PG                      +G  G  GLPGE G+    
Sbjct: 1186 -KPGAVGPAGAQGDTGLPGIKGDKGEVGPKGPHGPLGPPGAMGPTGSPGLPGEAGVAGDV 1244

Query: 209  GIPGRNGMDGIPGKDGLPGK---------------DGIPGTNGTNGEKGMTGPRGNRGKS 253
            G PG+ G  G PG  G PG+                GIPG +G  G+ G  G +G+ G +
Sbjct: 1245 GAPGKAGPAGSPGAVGAPGERGEKGERGKRGWKGDRGIPGKSGRKGDFGEKGEKGDTGPA 1304

Query: 254  GINGVPGTPAICAYKRESCSLLP 276
            G  G  G P I  ++ +  +  P
Sbjct: 1305 GPVGQTGKPGIQGFEGQKGADGP 1327



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 92/226 (40%), Gaps = 81/226 (35%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDEGKRGPK 163
           G++G  G +G  G+ G+MG +G+ G++G  G  GP         PG  G+PGD+G RG +
Sbjct: 384 GVEGARGPRGHPGSPGKMGRRGQSGKEGKRGPTGPMGQKGEQGHPGHPGLPGDKGDRGYQ 443

Query: 164 GD------MGYPGPQGIPGDEGKRGPKGDMG---YPGR---------------------- 192
           G+      MG  GP+G PG  G  G  G+MG   +PG+                      
Sbjct: 444 GNPGEAGLMGSDGPKGEPGPSGSPGLTGEMGQRGFPGQRGHSGPPGPPGIPGSEGPMGSK 503

Query: 193 --------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------- 231
                         +G  G  G  G PG+ G  G  G  G PG  GLPG +G+       
Sbjct: 504 GNEGPPGAPGQPGHVGQSGPMGPQGSPGIPGPIGSPGPRGKPGLPGLPGAEGLPGSSGSP 563

Query: 232 --------------------PGTNGTNGEKGMTGPRGNRGKSGING 257
                               PG  G  G++G+ GP G +G  GI G
Sbjct: 564 GSPGIKGDVGFIGPQGPVGFPGQRGYKGDQGVRGPSGVKGDKGIIG 609



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 92/238 (38%), Gaps = 81/238 (34%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------PQGIP 154
             S  +   PGL GP G  G  G  G  G++G++GE G PG  G  G         P G  
Sbjct: 1047 GSAGQPGEPGLAGPKGNDGIAGPTGPSGLRGQKGEDGKPGAAGTAGKDGPIGPVGPPGPK 1106

Query: 155  GDEGK---------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRI 193
            G+EGK                GPKG+ G PG  G+ G+ GK G KG+ G       PG I
Sbjct: 1107 GEEGKAGIPGPSGPRGPPGIEGPKGNPGAPGFPGVAGEAGKPGAKGEPGANGVNGAPGDI 1166

Query: 194  GLD---------GRDGLPGEPGLDGIPGRNGMDGIP------------------------ 220
            G           G  G PG+PG  G  G  G  G+P                        
Sbjct: 1167 GPPGPQGEPGKMGDTGSPGKPGAVGPAGAQGDTGLPGIKGDKGEVGPKGPHGPLGPPGAM 1226

Query: 221  ---GKDGLPGKDGI---------------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G  GLPG+ G+               PG  G  GE+G  G RG RG  G  G+PG
Sbjct: 1227 GPTGSPGLPGEAGVAGDVGAPGKAGPAGSPGAVGAPGERGEKGERGKRGWKGDRGIPG 1284



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 29/46 (63%)

Query: 142 PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           P V GP GPQG  G +G  GPKG+ G PG  GIPG EG  GP G +
Sbjct: 267 PRVQGPQGPQGFQGLQGPAGPKGEKGDPGKDGIPGTEGITGPPGHI 312


>gi|405951822|gb|EKC19701.1| Collagen alpha-2(I) chain [Crassostrea gigas]
          Length = 1317

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 87/174 (50%), Gaps = 28/174 (16%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------------- 162
            G+ G  G  GE GV GERGE   PG+ G PGP G  G  G+RG                
Sbjct: 579 TGEPGAPGPNGEAGVPGERGE---PGIQGEPGPSGPRGPTGERGTSGPPGEPGPPGPQGP 635

Query: 163 ---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG- 218
              +GD G PG  G+PGD G  GP+G  G  G  GL G DG+PGEPG +G+ G  G  G 
Sbjct: 636 IGERGDTGSPGVVGLPGDSGLPGPRGSRGNRGPRGLSGNDGIPGEPGAEGLKGEPGPPGP 695

Query: 219 ------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                 +PG  G PG  G PGT G++G +G  G  G  G  G+ G PG P +  
Sbjct: 696 VNTAPALPGPRGDPGLPGEPGTPGSDGPRGYPGNPGPAGDRGVQGDPGPPGLSG 749



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/160 (45%), Positives = 79/160 (49%), Gaps = 21/160 (13%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---PGPQGIP 175
           G  G  G  GEMG+ G  G  G PG VG PG  G PG +G  GPKG+MG    PG QG P
Sbjct: 310 GDAGLRGGNGEMGMTGPPGANGLPGPVGEPGRPGAPGTDGTTGPKGEMGMQGAPGSQGFP 369

Query: 176 GDEGKRGPKGDMGYPGRIG---------------LDGRDGLPGE---PGLDGIPGRNGMD 217
           G +G  G  GD G PG  G               L G  G PG    PG  G PG +G  
Sbjct: 370 GPQGPSGQAGDPGTPGDRGDTGPPGPPGQQGPVGLTGERGSPGATGLPGPQGSPGSSGRP 429

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G+ G PG  G PG  GT G +G  GPRG  GKSG  G
Sbjct: 430 GERGQAGEPGISGDPGIQGTPGFQGPPGPRGRAGKSGNQG 469



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 89/224 (39%), Gaps = 67/224 (29%)

Query: 114 LQGPIGQKGEIGAK---------------------GEMGVKGERGEKGAPGVVGPPGPQG 152
           +QGP G++GE G                       GE G  G  GE G PG  G PG QG
Sbjct: 545 IQGPQGERGETGVAGDPGFNGPPGGPGLPGDNGKTGEPGAPGPNGEAGVPGERGEPGIQG 604

Query: 153 IPGDEGKRGP------------------------KGDMGYPGPQGIPGDEGKRGPKGDMG 188
            PG  G RGP                        +GD G PG  G+PGD G  GP+G  G
Sbjct: 605 EPGPSGPRGPTGERGTSGPPGEPGPPGPQGPIGERGDTGSPGVVGLPGDSGLPGPRGSRG 664

Query: 189 YPGRIGLDGRDGLPGEPGLDGI----------------------PGRNGMDGIPGKDGLP 226
             G  GL G DG+PGEPG +G+                      PG  G  G PG DG  
Sbjct: 665 NRGPRGLSGNDGIPGEPGAEGLKGEPGPPGPVNTAPALPGPRGDPGLPGEPGTPGSDGPR 724

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G PG  G  G +G  GP G  G+ G  G  G P     K E
Sbjct: 725 GYPGNPGPAGDRGVQGDPGPPGLSGEVGAPGPRGRPGESGGKGE 768



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 87/192 (45%), Gaps = 52/192 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---------------------------------RGE 138
           PG  GP G+ G  G +GE G++GE                                 RG+
Sbjct: 582 PGAPGPNGEAGVPGERGEPGIQGEPGPSGPRGPTGERGTSGPPGEPGPPGPQGPIGERGD 641

Query: 139 KGAPGVVG-P-----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
            G+PGVVG P     PGP+   G  G RGP+G  G     GIPG+ G  G KG+ G PG 
Sbjct: 642 TGSPGVVGLPGDSGLPGPR---GSRGNRGPRGLSGN---DGIPGEPGAEGLKGEPGPPGP 695

Query: 193 I-------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           +       G  G  GLPGEPG  G  G  G  G PG  G  G  G PG  G +GE G  G
Sbjct: 696 VNTAPALPGPRGDPGLPGEPGTPGSDGPRGYPGNPGPAGDRGVQGDPGPPGLSGEVGAPG 755

Query: 246 PRGNRGKSGING 257
           PRG  G+SG  G
Sbjct: 756 PRGRPGESGGKG 767



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 79/164 (48%), Gaps = 33/164 (20%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER------------GEKGAPGV 144
           + MQG   S      PG QGP GQ G+ G  G+ G  G              GE+G+PG 
Sbjct: 357 MGMQGAPGSQGF---PGPQGPSGQAGDPGTPGDRGDTGPPGPPGQQGPVGLTGERGSPGA 413

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGL 201
            G PGPQG PG  G+ G +G  G PG  G PG +G    +GP G  G  G+ G  G+ G 
Sbjct: 414 TGLPGPQGSPGSSGRPGERGQAGEPGISGDPGIQGTPGFQGPPGPRGRAGKSGNQGQQGE 473

Query: 202 PGEPGLDGIPGRN---------------GMDGIPGKDGLPGKDG 230
            G+PGL G  G+N               G  GI G+ GLPG+DG
Sbjct: 474 RGQPGLAGKDGKNGEAGPPGPPGNPGLMGPSGIVGESGLPGRDG 517



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 72/169 (42%), Gaps = 42/169 (24%)

Query: 134 GERGEKGAPGVVGPPG---------------PQGIPGDEGKRGPKGDMGYPG---PQGIP 175
           G  GE+G PG  GPPG                 G PGD+G  GP G  G PG   P G P
Sbjct: 205 GNDGEEGLPGEQGPPGQTGEPGMPGGPGMTGEAGKPGDKGPVGPVGPSGSPGLMGPAGAP 264

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDG---------------------LPGEPGLDGIPGRN 214
           G+ G+ GP G    PG  GLDG  G                       G+ GL G  G  
Sbjct: 265 GERGRDGPDG---TPGLRGLDGSPGEQGPMGPIGPPGPPGFPGSMGAKGDAGLRGGNGEM 321

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           GM G PG +GLPG  G PG  G  G  G TGP+G  G  G  G  G P 
Sbjct: 322 GMTGPPGANGLPGPVGEPGRPGAPGTDGTTGPKGEMGMQGAPGSQGFPG 370



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 86/216 (39%), Gaps = 63/216 (29%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI-------------- 153
           E   PG +GP+G  G  G+ G MG  G  GE+G  G  G PG +G+              
Sbjct: 236 EAGKPGDKGPVGPVGPSGSPGLMGPAGAPGERGRDGPDGTPGLRGLDGSPGEQGPMGPIG 295

Query: 154 -------------PGDEGKRGPKGDMGYPGP---------------QGIPGDEGKRGPKG 185
                         GD G RG  G+MG  GP                G PG +G  GPKG
Sbjct: 296 PPGPPGFPGSMGAKGDAGLRGGNGEMGMTGPPGANGLPGPVGEPGRPGAPGTDGTTGPKG 355

Query: 186 DMGY---PGRIGLDGRDGLPGEPGLDGIPGRN------------------GMDGIPGKDG 224
           +MG    PG  G  G  G  G+ G  G PG                    G  G PG  G
Sbjct: 356 EMGMQGAPGSQGFPGPQGPSGQAGDPGTPGDRGDTGPPGPPGQQGPVGLTGERGSPGATG 415

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           LPG  G PG++G  GE+G  G  G  G  GI G PG
Sbjct: 416 LPGPQGSPGSSGRPGERGQAGEPGISGDPGIQGTPG 451



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 68/157 (43%), Gaps = 48/157 (30%)

Query: 113 GLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEG-- 158
           GL GP+G+ G  GA    G  G KGE G +GAPG  G PGPQG          PGD G  
Sbjct: 331 GLPGPVGEPGRPGAPGTDGTTGPKGEMGMQGAPGSQGFPGPQGPSGQAGDPGTPGDRGDT 390

Query: 159 ----------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                           +RG  G  G PGPQG PG  G+ G +G  G PG   + G  G+ 
Sbjct: 391 GPPGPPGQQGPVGLTGERGSPGATGLPGPQGSPGSSGRPGERGQAGEPG---ISGDPGIQ 447

Query: 203 GEPGLDGIPG---------------RNGMDGIPGKDG 224
           G PG  G PG                 G  G+ GKDG
Sbjct: 448 GTPGFQGPPGPRGRAGKSGNQGQQGERGQPGLAGKDG 484



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 82/170 (48%), Gaps = 25/170 (14%)

Query: 112 PGLQGPI-------GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           PG  GP+       G +G+ G  GE G  G  G +G PG  GP G +G+ GD G  G  G
Sbjct: 690 PGPPGPVNTAPALPGPRGDPGLPGEPGTPGSDGPRGYPGNPGPAGDRGVQGDPGPPGLSG 749

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL------DGRDGLPGEPGLDGIPGRNGMDG 218
           ++G PGP+G PG+ G +G  G+ G  G  G        G  GLPGE G  G PG  G  G
Sbjct: 750 EVGAPGPRGRPGESGGKGEVGEAGPQGPPGTPGSPGRSGPQGLPGEAGPTGAPGEMGRQG 809

Query: 219 IPG------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G            + G PG  G  G  G  GE+G+ G  G  G++G++
Sbjct: 810 DRGLQGPPGPSGPQGERGAPGYPGATGEMGPQGEQGLMGSPGEPGRNGLD 859



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 41/69 (59%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           + GP G++GE G  GE G+ G  G+ G  G VG PG +G  G  G +G KG  G PGPQG
Sbjct: 927 VSGPQGERGERGEAGEFGIMGAPGQPGPAGAVGAPGDKGETGTRGNKGDKGWPGLPGPQG 986

Query: 174 IPGDEGKRG 182
           +PG  G  G
Sbjct: 987 MPGPMGNSG 995



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 41/75 (54%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   +G   +T    P G  G  G+ GE G  GE G+ G+ G +G PG  GPPGP+G  G
Sbjct: 404 LTGERGSPGATGLPGPQGSPGSSGRPGERGQAGEPGISGDPGIQGTPGFQGPPGPRGRAG 463

Query: 156 DEGKRGPKGDMGYPG 170
             G +G +G+ G PG
Sbjct: 464 KSGNQGQQGERGQPG 478



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 49/107 (45%), Gaps = 15/107 (14%)

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG----- 227
           G PGD+G  GP G  G PG +G  G  G  G  G DG PG  G+DG PG+ G  G     
Sbjct: 238 GKPGDKGPVGPVGPSGSPGLMGPAGAPGERGRDGPDGTPGLRGLDGSPGEQGPMGPIGPP 297

Query: 228 ----------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                       G  G  G NGE GMTGP G  G  G  G PG P  
Sbjct: 298 GPPGFPGSMGAKGDAGLRGGNGEMGMTGPPGANGLPGPVGEPGRPGA 344



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 89/240 (37%), Gaps = 90/240 (37%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGE---------------KGAPGVVGPPGPQGIPG 155
           PPGL G +G  G  G  GE G KGE GE                G  G+ G  GP G PG
Sbjct: 744 PPGLSGEVGAPGPRGRPGESGGKGEVGEAGPQGPPGTPGSPGRSGPQGLPGEAGPTGAPG 803

Query: 156 DEGKRG---------------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---- 196
           + G++G                +G  GYPG  G  G +G++G  G  G PGR GLD    
Sbjct: 804 EMGRQGDRGLQGPPGPSGPQGERGAPGYPGATGEMGPQGEQGLMGSPGEPGRNGLDGLNG 863

Query: 197 -----------------------GRDGLPGEPGLDG------------------------ 209
                                  G +G PG PG  G                        
Sbjct: 864 PPGSPGPVGPQGPDGPPGENGPAGMNGSPGAPGASGEKGPRGPTGPSGLPGPPGPQGPQG 923

Query: 210 ---IPGRNGMDGIPGKDG------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              + G  G  G  G+ G       PG+ G  G  G  G+KG TG RGN+G  G  G+PG
Sbjct: 924 PTGVSGPQGERGERGEAGEFGIMGAPGQPGPAGAVGAPGDKGETGTRGNKGDKGWPGLPG 983



 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 93/211 (44%), Gaps = 63/211 (29%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------GPQGIPGDEGKRGPK 163
           GP G  GE+GA G  G  GE G KG  G  GP             GPQG+PG+ G  G  
Sbjct: 743 GPPGLSGEVGAPGPRGRPGESGGKGEVGEAGPQGPPGTPGSPGRSGPQGLPGEAGPTGAP 802

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMD--- 217
           G+MG  G +G+ G  G  GP+G+ G PG  G  G  G  GE GL    G PGRNG+D   
Sbjct: 803 GEMGRQGDRGLQGPPGPSGPQGERGAPGYPGATGEMGPQGEQGLMGSPGEPGRNGLDGLN 862

Query: 218 ---------------GIPGKDGLPGKDGIPGTNGTNGEKG-------------------- 242
                          G PG++G  G +G PG  G +GEKG                    
Sbjct: 863 GPPGSPGPVGPQGPDGPPGENGPAGMNGSPGAPGASGEKGPRGPTGPSGLPGPPGPQGPQ 922

Query: 243 ----MTGPRGNRGKS------GINGVPGTPA 263
               ++GP+G RG+       GI G PG P 
Sbjct: 923 GPTGVSGPQGERGERGEAGEFGIMGAPGQPG 953



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 54/132 (40%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ G  GP G+ G PG +G PG +G+ GP G  G  G  G  G  G PG PG  G  G  
Sbjct: 580 GEPGAPGPNGEAGVPGERGEPGIQGEPGPSGPRGPTGERGTSGPPGEPGPPGPQGPIGER 639

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G PG  GLPG  G+PG  G+ G       RG RG SG +G+PG P     K E    
Sbjct: 640 GDTGSPGVVGLPGDSGLPGPRGSRGN------RGPRGLSGNDGIPGEPGAEGLKGEPGPP 693

Query: 275 LPNSETSQLLIP 286
            P +    L  P
Sbjct: 694 GPVNTAPALPGP 705


>gi|309181|gb|AAA37440.1| procollagen type V alpha 2 [Mus musculus]
          Length = 1497

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 470 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 520

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 521 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 580

Query: 210 IPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G  G PG+DG PG  G       PG+ G  G KG +G  G  G++G  GVPG
Sbjct: 581 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGVPGPKGSSGDLGKPGEAGNAGVPG 637



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 84/162 (51%), Gaps = 21/162 (12%)

Query: 128 GEMGVKGERGEKGAPGV---VGP---PGPQGI------PGDEGKRGPKGDMGYPGPQGIP 175
           G  G++G+ G+ G PG     GP   PGP GI      PG+EGKRGP+GD G  GP   P
Sbjct: 457 GPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 513

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 514 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 570

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL 274
           G  G  G+ GP G     G  G +G PG P     + +  S+
Sbjct: 571 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSM 612



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 86/165 (52%), Gaps = 9/165 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGHKG---LEGPKGEIGAPGAKGEAGPTGPMGAMGPL 333

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G  G  G PG  G  GIPG +G  G PG  G  G  
Sbjct: 334 GPRGMPGERGRLGPQ---GAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGERGPH 390

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G  G  G++G TGP G  G  G+ G  GT      K  + S 
Sbjct: 391 GARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGRKGATGSA 435



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 89/169 (52%), Gaps = 21/169 (12%)

Query: 113 GLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEG------KR 160
           GL+GP G+ G  GAKGE      MG  G  G +G PG  G  GPQG PG  G      K 
Sbjct: 304 GLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKP 363

Query: 161 GPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GP G +G PG  G PG+   +G+RGP G  G  G  G  G  G PG  G  G+PG  G D
Sbjct: 364 GPMGPLGIPGSSGFPGNPGMKGERGPHGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTD 423

Query: 218 GIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG+ G  G  G        G  G+ G +G TGP+G RG+SG  GVPG
Sbjct: 424 GTPGRKGATGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPG 472



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 265 GEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPT 324

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 325 GPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 384

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G +G +G  GP+G RG++G  G  G+
Sbjct: 385 GERGPHGARGPEGPQGQRGETGPPGPAGS 413



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 77/161 (47%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  GA G  GP GP G  G  G R
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPR 336

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G+ G  GPQG PG  G  G  G  G  G +G+ G  G PG PG+ G  G +G  G  
Sbjct: 337 GMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGERGPHGARGPE 396

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G+ G PG  G+ G  G  G  G  G+ G  G  GT
Sbjct: 397 GPQGQRGETGPPGPAGSQGLPGAVGTDGTPGRKGATGSAGT 437



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 89/214 (41%), Gaps = 63/214 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
           PG  GP+G  G  G  G  G+KGERG  GA    GP GPQG  G+ G  GP G  G P  
Sbjct: 363 PGPMGPLGIPGSSGFPGNPGMKGERGPHGA---RGPEGPQGQRGETGPPGPAGSQGLPGA 419

Query: 170 -------------------------------------GPQGI---------PGDEGKRGP 183
                                                GPQGI         PG +G+ GP
Sbjct: 420 VGTDGTPGRKGATGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGP 479

Query: 184 KGDMGYPGRIGLDGRDGLPGE---------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
           KG+   PG  G+ G  G PGE         PG  G PG  G  G PG  G PG DG+PG 
Sbjct: 480 KGE---PGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGP 536

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  GE+G  G  G +G  G  G PG P +   +
Sbjct: 537 KGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGAR 570



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 91/189 (48%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 576 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGVPGPKGSSGDLGKPGEAGNAGV 635

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 636 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEAGPPGPTGFQGLPGPPGPPGEGGKAGDQGV 695

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PGEPG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+GN G +G  G  G 
Sbjct: 696 PGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGP 755

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 756 PGLQGMPGE 764



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 89/182 (48%), Gaps = 36/182 (19%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA         +G  G++G R
Sbjct: 745 GPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGA---------EGTAGNDGAR 795

Query: 161 ---------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                                GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ 
Sbjct: 796 GLPGPLGPPGPAGLLGAPGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGSDGQP 855

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G+ GEPG    PG+ G  G PG  GL    G PG +G +G  G+ G RG +G  G  G P
Sbjct: 856 GVKGEPGE---PGQKGDAGSPGPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFP 909

Query: 260 GT 261
           G+
Sbjct: 910 GS 911



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 100/238 (42%), Gaps = 69/238 (28%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP G   P G P
Sbjct: 532 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 591

Query: 155 GDEGKRGPKGD---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----- 200
           G++G+ GP G          MG PGP+G  GD GK G  G+ G PG+ G  G+DG     
Sbjct: 592 GEDGRPGPPGSIGIRGQPGSMGVPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPS 651

Query: 201 -------------------------------------------LPGEPGLDGIPGRNGMD 217
                                                      +PGEPG  G  G  G  
Sbjct: 652 GPVGPPGLAGERGEAGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGER 711

Query: 218 GIPGK------DGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPAICA 266
           G PG+       GLPG+ G+ G +G +G KG  GP    G+ G  G+ G+PG   I  
Sbjct: 712 GNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAG 769



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 78/164 (47%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RG  G PG+   PGP G P   GK GP G                   
Sbjct: 987  TGQRGIVGMPGQRGVTGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1040

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1041 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGE 1100

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1101 PGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1144



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 88/190 (46%), Gaps = 39/190 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 599 PPGSIGIRGQPGSMGVPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 658

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PG+ G     GP+G+ G PG  G
Sbjct: 659 LAGERGEAGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERG 718

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
             G  GLPGE G+ G  G +G  G PG  G  G  G PG  G  GE+G+    GP+G+RG
Sbjct: 719 EPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRG 778

Query: 252 KSGINGVPGT 261
             G  G  GT
Sbjct: 779 GIGEKGAEGT 788



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 83/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 699 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGL 758

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 759 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGLLGAPGEPGP 818

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G+ G+ G+ G PG P 
Sbjct: 819 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGSDGQPGVKGEPGEPG 865



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 82/187 (43%), Gaps = 48/187 (25%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKG---------DMGYP 169
           GE GA G +G +GERG   E+G PG+ G PG +G+ G  G  GPKG         D G P
Sbjct: 697 GEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPP 756

Query: 170 GPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDG-------------------------- 200
           G QG+PG+ G     GPKGD G  G  G +G  G                          
Sbjct: 757 GLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGLLGAPGEP 816

Query: 201 ----LPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               L G PG  G PG  G +G  G  G     G DG PG  G  GE G  G  G+ G  
Sbjct: 817 GPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGSDGQPGVKGEPGEPGQKGDAGSPGPQ 876

Query: 254 GINGVPG 260
           G+ G PG
Sbjct: 877 GLAGSPG 883



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP- 169
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G P 
Sbjct: 824 PPGSRGNPGSRGENGPTGAVGFAGPQGSDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 883

Query: 170 --GPQGIPGDEGKR---GPKGDMGYPGRIG 194
             GP G+PG +G R   GP G  G+PG  G
Sbjct: 884 PHGPHGVPGLKGGRGTQGPPGATGFPGSAG 913



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 65/140 (46%), Gaps = 39/140 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G  G  G  G +G +G+RG+         PGP G+PG +G        G PGP
Sbjct: 1044 PGPEGPAGNDGTPGRDGAVGERGDRGD---------PGPAGLPGSQGA------PGTPGP 1088

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PGD G+R                  G PG  G  G PGR       GK GLPG  G 
Sbjct: 1089 VGAPGDAGQR------------------GEPGSRGPVGPPGRA------GKRGLPGPQGP 1124

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G NG++G  G +G+RG
Sbjct: 1125 RGDKGDNGDRGDRGQKGHRG 1144



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  G+ G RGP G  G  G 
Sbjct: 1056 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGEPGSRGPVGPPGRAGK 1115

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1116 RGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1145



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 29/56 (51%), Gaps = 6/56 (10%)

Query: 208 DGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           DG PGRN      G  G PG  G PG  G+PG  G  G KG+ GP+G  G  G  G
Sbjct: 264 DGEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKG 319


>gi|71361203|dbj|BAE16360.1| type V/XI procollagen alpha 1 chain [Raja kenojei]
          Length = 1860

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 90/174 (51%), Gaps = 15/174 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G +G+ G++G+ G  GE G++G  G VGP G  G PG  G  GPKG  G  GP
Sbjct: 657 PGLPGEKGNRGDAGSQGQPGPTGEVGDRGDDGEVGPRGLPGEPGPRGLLGPKGPAGPAGP 716

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLD------GRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            GI G +G  GPKG  G  G  G        G  GLPG  G  G PG NG  G PG  G+
Sbjct: 717 HGITGMDGHNGPKGSQGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGTNGPTGKPGLPGV 776

Query: 226 PGKDGI---PGTNGTNGEKGMTGPRGNR------GKSGINGVPGTPAICAYKRE 270
           PG DG    PG  G +GEKG +GP G +      G  GI G  G   +  +K E
Sbjct: 777 PGSDGPPGHPGKEGPSGEKGNSGPAGPQGPIGYPGARGIKGADGIRGLMGHKGE 830



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 88/195 (45%), Gaps = 15/195 (7%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G   S  +  P G  G  G  GE+G +G  G  G RG  G  G  GP GP GI G +G 
Sbjct: 666 RGDAGSQGQPGPTGEVGDRGDDGEVGPRGLPGEPGPRGLLGPKGPAGPAGPHGITGMDGH 725

Query: 160 RGPKGDMGY------------PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGE 204
            GPKG  G             PG QG+PG +G  GP    G  G PG  G+ G DG PG 
Sbjct: 726 NGPKGSQGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGTNGPTGKPGLPGVPGSDGPPGH 785

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PG +G  G  G  G  G  G  G  G  G  G +G +G+ G +G +G+ G  G  G   I
Sbjct: 786 PGKEGPSGEKGNSGPAGPQGPIGYPGARGIKGADGIRGLMGHKGEKGEDGFPGFKGDMGI 845

Query: 265 CAYKRESCSLLPNSE 279
              + E     P  E
Sbjct: 846 KGDRGELGPAGPRGE 860



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 85/205 (41%), Gaps = 42/205 (20%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
             QG         PPG  GP G+ G        G  G  G +G  GEKG  G  GP GP 
Sbjct: 748 GAQGLPGPQGAIGPPGTNGPTGKPGLPGVPGSDGPPGHPGKEGPSGEKGNSGPAGPQGPI 807

Query: 152 GIPGDEG------------KRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLD 196
           G PG  G             +G KG+ G+PG     GI GD G+ GP G  G  G  G  
Sbjct: 808 GYPGARGIKGADGIRGLMGHKGEKGEDGFPGFKGDMGIKGDRGELGPAGPRGEDGPEGPK 867

Query: 197 GR---------------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           GR                      GLPG PG  G  G  G  G PG +G  G  G PG +
Sbjct: 868 GRVGPSGDPGPGGPAGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGVRGTPGKS 927

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G++G TGPRG RG  G  G  G
Sbjct: 928 GPRGQRGPTGPRGERGPRGSTGKAG 952



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 111/259 (42%), Gaps = 33/259 (12%)

Query: 44  KGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRI--PLVAMQG 101
           KG++ D   PQ P     PP    +   R +   +     P        R    L  + G
Sbjct: 603 KGEMGDLG-PQGPRGSQGPPGPMGKSGRRGRPGSDGARGIPGTSGRKGDRGFDGLPGLPG 661

Query: 102 FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------GPPGPQGIPG 155
              +  +    G  GP G+ G+ G  GE+G +G  GE G  G++      GP GP GI G
Sbjct: 662 EKGNRGDAGSQGQPGPTGEVGDRGDDGEVGPRGLPGEPGPRGLLGPKGPAGPAGPHGITG 721

Query: 156 DEGKRGPKGDMGY------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            +G  GPKG  G             PG QG+P      GP+G +G PG  G  G+ GLPG
Sbjct: 722 MDGHNGPKGSQGPQGEPGPPGQQGNPGAQGLP------GPQGAIGPPGTNGPTGKPGLPG 775

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG DG PG  G +G  G+ G  G        G PG  G  G  G+ G  G++G+ G +G
Sbjct: 776 VPGSDGPPGHPGKEGPSGEKGNSGPAGPQGPIGYPGARGIKGADGIRGLMGHKGEKGEDG 835

Query: 258 VPGTPAICAYKRESCSLLP 276
            PG       K +   L P
Sbjct: 836 FPGFKGDMGIKGDRGELGP 854



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 76/171 (44%), Gaps = 21/171 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------------PGVVGPPGPQG 152
           E  P GL GP G  G  G  G  G+ G  G KG+               PG  G PGPQG
Sbjct: 698 EPGPRGLLGPKGPAGPAGPHGITGMDGHNGPKGSQGPQGEPGPPGQQGNPGAQGLPGPQG 757

Query: 153 IPGDEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL-- 207
             G  G  GP G  G PG     G PG  GK GP G+ G  G  G  G  G PG  G+  
Sbjct: 758 AIGPPGTNGPTGKPGLPGVPGSDGPPGHPGKEGPSGEKGNSGPAGPQGPIGYPGARGIKG 817

Query: 208 -DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            DGI G  G  G  G+DG PG  G  G  G  GE G  GPRG  G  G  G
Sbjct: 818 ADGIRGLMGHKGEKGEDGFPGFKGDMGIKGDRGELGPAGPRGEDGPEGPKG 868



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 87/182 (47%), Gaps = 39/182 (21%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPKGDMGYPGP 171
           +G KGE+G   ++G +G RG +G PG +G  G +G PG +G R      G KGD G+ G 
Sbjct: 600 LGIKGEMG---DLGPQGPRGSQGPPGPMGKSGRRGRPGSDGARGIPGTSGRKGDRGFDGL 656

Query: 172 QGIPGDEGKRGPKGDMGYP---GRIGLDGRD------GLPGEPGLDGIPGRNGMDGIPGK 222
            G+PG++G RG  G  G P   G +G  G D      GLPGEPG  G+ G  G  G  G 
Sbjct: 657 PGLPGEKGNRGDAGSQGQPGPTGEVGDRGDDGEVGPRGLPGEPGPRGLLGPKGPAGPAGP 716

Query: 223 DGLPGKDGI---------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+ G DG                      PG  G  G +G  GP G  G +G  G+PG 
Sbjct: 717 HGITGMDGHNGPKGSQGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGTNGPTGKPGLPGV 776

Query: 262 PA 263
           P 
Sbjct: 777 PG 778



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 87/194 (44%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGD 165
           PG QG  G +G IG  G  G  G+ G  G PG  GPPG      P G  G+ G  GP+G 
Sbjct: 747 PGAQGLPGPQGAIGPPGTNGPTGKPGLPGVPGSDGPPGHPGKEGPSGEKGNSGPAGPQGP 806

Query: 166 MGYPGPQGIPGDEGKRGP---------------KGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           +GYPG +GI G +G RG                KGDMG  G  G  G  G  GE G +G 
Sbjct: 807 IGYPGARGIKGADGIRGLMGHKGEKGEDGFPGFKGDMGIKGDRGELGPAGPRGEDGPEGP 866

Query: 211 PGR---------------------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------ 243
            GR                      G+ G PG+ G  G  G PG  G NGEKG+      
Sbjct: 867 KGRVGPSGDPGPGGPAGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGVRGTPGK 926

Query: 244 TGPRGNRGKSGING 257
           +GPRG RG +G  G
Sbjct: 927 SGPRGQRGPTGPRG 940



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 82/175 (46%), Gaps = 33/175 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G +G IG  G  G+KG  G +G  G  G  G  G PG +G  G KGD G  GP 
Sbjct: 796 GNSGPAGPQGPIGYPGARGIKGADGIRGLMGHKGEKGEDGFPGFKGDMGIKGDRGELGPA 855

Query: 173 GIPGDEGKRGPKGDM------------------------GYPGRIGLDGRDGLPGEPGLD 208
           G  G++G  GPKG +                        GYPGR G  G  G PG PG +
Sbjct: 856 GPRGEDGPEGPKGRVGPSGDPGPGGPAGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGAN 915

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPG 260
           G     G+ G PGK G  G+ G  G  G  G +G T   GP+GN   SG +G PG
Sbjct: 916 G---EKGVRGTPGKSGPRGQRGPTGPRGERGPRGSTGKAGPKGN---SGTDGPPG 964



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 80/173 (46%), Gaps = 36/173 (20%)

Query: 111 PPGLQGPIGQ------KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           P G QGPIG       KG  G +G MG KGE+GE G PG  G     GI GD G+ GP G
Sbjct: 800 PAGPQGPIGYPGARGIKGADGIRGLMGHKGEKGEDGFPGFKGD---MGIKGDRGELGPAG 856

Query: 165 DMGYPGPQG---------------------------IPGDEGKRGPKGDMGYPGRIGLDG 197
             G  GP+G                           +PG  G++GPKG +G+PG  G +G
Sbjct: 857 PRGEDGPEGPKGRVGPSGDPGPGGPAGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANG 916

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
             G+ G PG  G  G+ G  G  G+ G  G  G  G  G +G  G  GP G R
Sbjct: 917 EKGVRGTPGKSGPRGQRGPTGPRGERGPRGSTGKAGPKGNSGTDGPPGPTGER 969



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 83/189 (43%), Gaps = 24/189 (12%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  G++G  G+ G  G+ G  G KG  G  G PG   +PG++G RG  G  G PG
Sbjct: 620 PPGPMGKSGRRGRPGSDGARGIPGTSGRKGDRGFDGLPG---LPGEKGNRGDAGSQGQPG 676

Query: 171 PQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI-------- 219
           P G     GD+G+ GP+G  G PG  GL G  G  G  G  GI G +G +G         
Sbjct: 677 PTGEVGDRGDDGEVGPRGLPGEPGPRGLLGPKGPAGPAGPHGITGMDGHNGPKGSQGPQG 736

Query: 220 ----------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
                     PG  GLPG  G  G  GTNG  G  G  G  G  G  G PG       K 
Sbjct: 737 EPGPPGQQGNPGAQGLPGPQGAIGPPGTNGPTGKPGLPGVPGSDGPPGHPGKEGPSGEKG 796

Query: 270 ESCSLLPNS 278
            S    P  
Sbjct: 797 NSGPAGPQG 805



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 75/143 (52%), Gaps = 30/143 (20%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYPGPQ 172
            GP G  GE G +G+ G+ G++G++G  G +GPPGP   QG+PG +G++G  GD+G  GP 
Sbjct: 1213 GPAGADGEPGPRGQQGLFGQKGDEGPRGFLGPPGPVGLQGLPGSQGEKGETGDVGPMGPP 1272

Query: 173  GIPGD---------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G PG          +G +GP G +G PG +G  G  G PG PG  G  G+          
Sbjct: 1273 GPPGPRGPSGSPGADGPQGPAGGIGNPGAVGEKGDSGEPGAPGPVGYIGQ---------- 1322

Query: 224  GLPGKDGIPGTNGTNGEKGMTGP 246
                    PG  G  GEKG +GP
Sbjct: 1323 --------PGVRGERGEKGESGP 1337



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 80/187 (42%), Gaps = 48/187 (25%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------ 160
            G+QGP+G  G  G+ G  G  G++GE G PG       +G   D+G++            
Sbjct: 1156 GIQGPVGLPGPAGSAGPPGEDGDKGETGEPGQ------KGSKADKGEQGPPGPSGPQGPI 1209

Query: 161  ---GPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG-------- 206
               GP G  G PGP   QG+ G +G  GP+G +G PG +GL G  G  GE G        
Sbjct: 1210 GQPGPAGADGEPGPRGQQGLFGQKGDEGPRGFLGPPGPVGLQGLPGSQGEKGETGDVGPM 1269

Query: 207  ----------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                             DG  G  G  G PG  G  G  G PG  G  G  G  G RG R
Sbjct: 1270 GPPGPPGPRGPSGSPGADGPQGPAGGIGNPGAVGEKGDSGEPGAPGPVGYIGQPGVRGER 1329

Query: 251  GKSGING 257
            G+ G +G
Sbjct: 1330 GEKGESG 1336



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 61/128 (47%), Gaps = 30/128 (23%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG-------- 173
            G  G +GE G KG+ G +G PG  GP GPQG P   GK G +G  G PGP G        
Sbjct: 1420 GPEGRQGEKGAKGDAGAEGPPGKTGPVGPQGSP---GKTGSEGLRGIPGPVGEQGFPGPP 1476

Query: 174  ----------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
                            + GD G    KG+ G+PG IGL G  G  GE G  G+PG  G++
Sbjct: 1477 GPTGPPGPMGPPGLPGLKGDPGT---KGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGVE 1533

Query: 218  GIPGKDGL 225
            G  G  G+
Sbjct: 1534 GSKGDSGV 1541



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 85/192 (44%), Gaps = 48/192 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGPPGP----------- 150
            PPGL+G  G++G  G  G++G+KG  G  G P         G+ GP GP           
Sbjct: 1073 PPGLRGFTGERGLPGPLGQIGLKGSEGPPGPPGSLGSPGDRGLAGPAGPIGLPGRPGPQG 1132

Query: 151  -------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG--- 200
                   +G PG++G +GP G  G  GP G+PG  G  GP G+ G  G  G  G+ G   
Sbjct: 1133 PPGPAGEKGTPGEKGPQGPAGRDGIQGPVGLPGPAGSAGPPGEDGDKGETGEPGQKGSKA 1192

Query: 201  ------------------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                               PG  G DG PG  G  G+ G+ G  G  G  G  G  G +G
Sbjct: 1193 DKGEQGPPGPSGPQGPIGQPGPAGADGEPGPRGQQGLFGQKGDEGPRGFLGPPGPVGLQG 1252

Query: 243  MTGPRGNRGKSG 254
            + G +G +G++G
Sbjct: 1253 LPGSQGEKGETG 1264



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 77/181 (42%), Gaps = 36/181 (19%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR- 181
            E G  GE G +G  G  G  G VG PGP G  G  G+ G KG+ G PG +G   D+G++ 
Sbjct: 1139 EKGTPGEKGPQGPAGRDGIQGPVGLPGPAGSAGPPGEDGDKGETGEPGQKGSKADKGEQG 1198

Query: 182  --------------GPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                          GP G  G P   G+ GL G+ G  G  G  G PG  G+ G+PG  G
Sbjct: 1199 PPGPSGPQGPIGQPGPAGADGEPGPRGQQGLFGQKGDEGPRGFLGPPGPVGLQGLPGSQG 1258

Query: 225  LPGKDG------------------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
              G+ G                   PG +G  G  G  G  G  G+ G +G PG P    
Sbjct: 1259 EKGETGDVGPMGPPGPPGPRGPSGSPGADGPQGPAGGIGNPGAVGEKGDSGEPGAPGPVG 1318

Query: 267  Y 267
            Y
Sbjct: 1319 Y 1319



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 74/178 (41%), Gaps = 57/178 (32%)

Query: 126  AKGEMGVKGERGEKGAPGVVG---------------------PPGPQGIPGDEGKRGPKG 164
            A G+ G  G++GE G PG  G                     P GP+   G +G++G KG
Sbjct: 1376 APGQDGPSGDKGEDGEPGQTGSPGPTGEAGPPGPPGKRGPHGPAGPE---GRQGEKGAKG 1432

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------ 206
            D G  GP       GK GP G  G PG+ G +G  G+PG  G                  
Sbjct: 1433 DAGAEGP------PGKTGPVGPQGSPGKTGSEGLRGIPGPVGEQGFPGPPGPTGPPGPMG 1486

Query: 207  ------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                  L G PG  G  G PG  GL    G PG  G  G++G+ GP+G  G  G +GV
Sbjct: 1487 PPGLPGLKGDPGTKGEKGHPGLIGL---IGPPGEQGEKGDRGLPGPQGVEGSKGDSGV 1541



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 71/189 (37%), Gaps = 60/189 (31%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ--- 172
            GP G  G IG  G +G KG+ GE GA      PGP G  G  G RG +G+ G  GP    
Sbjct: 1288 GPQGPAGGIGNPGAVGEKGDSGEPGA------PGPVGYIGQPGVRGERGEKGESGPSGAA 1341

Query: 173  ---------------------------------GIPGDEGKRGPKGDMGYPGRIG----- 194
                                             G PG +G  G KG+ G PG+ G     
Sbjct: 1342 GPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEAGAPGQDGPSGDKGEDGEPGQTGSPGPT 1401

Query: 195  -------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                           G  G  G  G  G  G  G +G PGK G  G  G PG  G+ G +
Sbjct: 1402 GEAGPPGPPGKRGPHGPAGPEGRQGEKGAKGDAGAEGPPGKTGPVGPQGSPGKTGSEGLR 1461

Query: 242  GMTGPRGNR 250
            G+ GP G +
Sbjct: 1462 GIPGPVGEQ 1470



 Score = 39.7 bits (91), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 68/157 (43%), Gaps = 51/157 (32%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG---------------DM 166
            G+ GAKG+ G  G  G+ G PG+ G  G +G+PG  G+ G KG               D 
Sbjct: 1054 GKEGAKGDPGPAGPSGKDGPPGLRGFTGERGLPGPLGQIGLKGSEGPPGPPGSLGSPGDR 1113

Query: 167  GYPGP---------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  GP                     +G PG++G +GP G            RDG+ G  
Sbjct: 1114 GLAGPAGPIGLPGRPGPQGPPGPAGEKGTPGEKGPQGPAG------------RDGIQGPV 1161

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            GL   PG  G  G PG+DG  G+ G PG  G+  +KG
Sbjct: 1162 GL---PGPAGSAGPPGEDGDKGETGEPGQKGSKADKG 1195


>gi|126326737|ref|XP_001378478.1| PREDICTED: collagen alpha-2(V) chain-like [Monodelphis domestica]
          Length = 1499

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/172 (45%), Positives = 92/172 (53%), Gaps = 15/172 (8%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     E  P G  GP G +G IG  GE   +G+RG +G PG VGPPGP G  G  G R
Sbjct: 471 GFPGFKGEAGPKGEPGPHGIQGPIGPVGE---EGKRGPRGDPGTVGPPGPVGERGSPGNR 527

Query: 161 GPKGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDGIPGRN 214
           G  G  G PGP+G  G+    G  GPKG  G PGR    GL G  GL G PG+ G  G+ 
Sbjct: 528 GFPGSDGLPGPKGAQGERGPAGSSGPKGGQGDPGRTGEPGLPGARGLTGNPGVQGPEGKL 587

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
           G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 588 GPLGAPGEDGRPGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 85/148 (57%), Gaps = 9/148 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +GE G  G  G KG +G+ G  G  G PG +G+ G+ G +GP+G +G   P 
Sbjct: 534 GLPGPKGAQGERGPAGSSGPKGGQGDPGRTGEPGLPGARGLTGNPGVQGPEGKLG---PL 590

Query: 173 GIPGDEGKRGPKGDMG---YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG++G+ GP G +G    PG +GL G  G  G+PG    PG  G  G+PG+ G PGKD
Sbjct: 591 GAPGEDGRPGPAGSIGIRGQPGSMGLPGPKGSSGDPGK---PGEAGNAGVPGQRGAPGKD 647

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G +G  G  G+ G RG +G  G  G
Sbjct: 648 GEVGPSGPVGPSGLAGERGEQGPPGPTG 675



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 87/176 (49%), Gaps = 27/176 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  G+ G  GE G  G  G++GAPG  G  GP G  G  G  G +G+ G PGP 
Sbjct: 615 GLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPSGLAGERGEQGPPGPT 674

Query: 172 --------------------QGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                               QG+PGD G     GP+G+ G PG  G  G  GLPGE G+ 
Sbjct: 675 GFQGLPGTPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMA 734

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           G  G +G  G PG  G PG  G PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 735 GGHGPDGPKGSPGPSGTPGDAGPPGLQGMPGERGIAGTPGPKGDRGGLGEKGSEGT 790



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 92/189 (48%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 169 PGPQGIPGDEGKRGP------------KGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+ GP            +G+ G PG  G  G                 G+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPSGLAGERGEQGPPGPTGFQGLPGTPGPPGEGGKPGDQGV 697

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG+PG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+G+ G SG  G  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDAGP 757

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 758 PGLQGMPGE 766



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 90/195 (46%), Gaps = 45/195 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------- 155
           PG  G  G+ G  GA+G  G +G+RGE GAPG VG    QG+PG                
Sbjct: 380 PGNPGMKGEAGPTGARGPEGPQGQRGETGAPGPVGS---QGLPGTVGTDGTPGAKGPTGS 436

Query: 156 -----------------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                                    G RG  GD G+PG +G  G +G+ GP G  G  G 
Sbjct: 437 PGTSGPPGSTGPPGSPGPQGSTGQPGIRGQTGDPGFPGFKGEAGPKGEPGPHGIQGPIGP 496

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGN 249
           +G +G+ G  G+PG  G PG  G  G PG  G PG DG+PG  G  GE+   G +GP+G 
Sbjct: 497 VGEEGKRGPRGDPGTVGPPGPVGERGSPGNRGFPGSDGLPGPKGAQGERGPAGSSGPKGG 556

Query: 250 RGKSGINGVPGTPAI 264
           +G  G  G PG P  
Sbjct: 557 QGDPGRTGEPGLPGA 571



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 85/197 (43%), Gaps = 51/197 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G    KGE G  GA G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLDGPKGEVGATGAKGEAGPTGAMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDG------------------LPGEPGL 207
            G  G+PG  G  GP    G  G+PG  G+ G  G                   PG  G 
Sbjct: 356 RGAHGMPGKPGPMGPLGITGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGETGAPGPVGS 415

Query: 208 DGIPGRNGMDGIPGKD---------------------------GLPGKDGIPGTNGTNGE 240
            G+PG  G DG PG                             G PG  G  G  G  G 
Sbjct: 416 QGLPGTVGTDGTPGAKGPTGSPGTSGPPGSTGPPGSPGPQGSTGQPGIRGQTGDPGFPGF 475

Query: 241 KGMTGPRGNRGKSGING 257
           KG  GP+G  G  GI G
Sbjct: 476 KGEAGPKGEPGPHGIQG 492



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 81/155 (52%), Gaps = 12/155 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G  G +G  G  
Sbjct: 267 GEAGRNGNPGEVGFSGSPGARGFPGAPGFPGLKGHRGHKGLDGPKGEVGATGAKGEAGPT 326

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GI G  G PG  G+ 
Sbjct: 327 GAMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGITGSAGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKSGI------NGVPGT 261
           G  G  G +G  GP+G RG++G        G+PGT
Sbjct: 387 GEAGPTGARGPEGPQGQRGETGAPGPVGSQGLPGT 421



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 79/161 (49%), Gaps = 24/161 (14%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDE---------GKRGPKGD 165
             GQ+G +G  G+   +GERG  G PG  G P   GP G PGD+         G  GP G+
Sbjct: 989  TGQRGIVGMPGQ---RGERGMPGLPGPAGTPGKAGPTGAPGDKGPSGPVGPPGANGPVGE 1045

Query: 166  MGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G  GP    G PG +G  G +GD G PG  GL G  G  G PG  G  G  G  G PG 
Sbjct: 1046 AGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGASGTPGPVGATGDAGPRGDPGS 1105

Query: 223  ------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                   G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1106 RGPVGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 77/176 (43%), Gaps = 30/176 (17%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---------PGDEGKRGPKGDM 166
           GP G  GE G  G  G  G+RG  G PG  GP GP GI         PG +G+ GP G  
Sbjct: 336 GPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGITGSAGFPGNPGMKGEAGPTGAR 395

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP--------------------- 205
           G  GPQG  G+ G  GP G  G PG +G DG  G  G                       
Sbjct: 396 GPEGPQGQRGETGAPGPVGSQGLPGTVGTDGTPGAKGPTGSPGTSGPPGSTGPPGSPGPQ 455

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G PG  G  G PG  G  G+ G  G  G +G +G  GP G  GK G  G PGT
Sbjct: 456 GSTGQPGIRGQTGDPGFPGFKGEAGPKGEPGPHGIQGPIGPVGEEGKRGPRGDPGT 511



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKG+ G  G  G +         
Sbjct: 747 GPSGTPGDAGPPGLQGMPGERGIAGTPGPKGDRGGLGEKGSEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGTPGSRGENGPTGAVGFAGPPGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 84/197 (42%), Gaps = 51/197 (25%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGP 162
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP      PGP G PGD    GP
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDA---GP 757

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------------PGE 204
            G  G PG +GI G  G +G +G +G  G  G  G DG                    GE
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGLGEKGSEGTAGNDGARGLPGPLGPPGPAGPTGEKGE 817

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGI------------------PGTNGTNGEKGMTGP 246
           PG  G+ G  G  G PG  G  G  G                   PG  G  G+ G  GP
Sbjct: 818 PGPRGLVGPPGSRGTPGSRGENGPTGAVGFAGPPGPDGQPGVKGEPGEPGQKGDAGSPGP 877

Query: 247 R---GNRGKSGINGVPG 260
           +   G+ G  G NGVPG
Sbjct: 878 QGLAGSPGPHGPNGVPG 894



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 57/122 (46%), Gaps = 12/122 (9%)

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM------------GYPGRIGLDGR 198
            +GI G  G+RG +G  G PGP G PG  G  G  GD             G  G  G +G 
Sbjct: 992  RGIVGMPGQRGERGMPGLPGPAGTPGKAGPTGAPGDKGPSGPVGPPGANGPVGEAGPEGP 1051

Query: 199  DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G  G PG DG  G  G  G PG  GLPG  G  GT G  G  G  GPRG+ G  G  G 
Sbjct: 1052 AGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGASGTPGPVGATGDAGPRGDPGSRGPVGP 1111

Query: 259  PG 260
            PG
Sbjct: 1112 PG 1113



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 49/90 (54%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG  G  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGASGTPGPVGATGDAGPRGDPGSRGPVGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 66/146 (45%), Gaps = 2/146 (1%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G PG+ G  G  G  G+PG  G PG +G RG KG  G  G +G  G  G  G  G  G  
Sbjct: 273 GNPGEVGFSGSPGARGFPGAPGFPGLKGHRGHKGLDGPKGEVGATGAKGEAGPTGAMGAM 332

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G  G  G+PG+ G  G  G PG  G +G  G  GP G  G +G  G PG P +      +
Sbjct: 333 GPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGITGSAGFPGNPGMKGEAGPT 392

Query: 272 CSLLPNSETSQL--LIPPTIVGSEHI 295
            +  P     Q      P  VGS+ +
Sbjct: 393 GARGPEGPQGQRGETGAPGPVGSQGL 418



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 80/200 (40%), Gaps = 48/200 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEM----------------------------------------- 130
           PG  GP+G +G  G +G+                                          
Sbjct: 212 PGSVGPVGPRGPQGLQGKQGGVGPTGPPGEPGEPGPMGPVGARGPEGPPGKPGEDGEAGR 271

Query: 131 -GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G PG +G RG KG  G  G  G  G +G+ GP G MG 
Sbjct: 272 NGNPGEVGFSGSPGARGFPGAPGFPGLKGHRGHKGLDGPKGEVGATGAKGEAGPTGAMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+ G  G PG  G  GE G 
Sbjct: 332 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGITGSAGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGINGVPGTPA 263
           TG RG  G  G  G  G P 
Sbjct: 392 TGARGPEGPQGQRGETGAPG 411



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 64/144 (44%), Gaps = 33/144 (22%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGKRGPKGDMG 167
           +KGE G +G +G  G RG  G+ G  GP G  G            + G+ G+ G KGD G
Sbjct: 814 EKGEPGPRGLVGPPGSRGTPGSRGENGPTGAVGFAGPPGPDGQPGVKGEPGEPGQKGDAG 873

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---------- 217
            PGPQG+ G  G  GP       G  GL G  G  G PG  G PG  G            
Sbjct: 874 SPGPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPG 927

Query: 218 -----GIPGKDGLPGKDGIPGTNG 236
                G PGK+G PG  G PG +G
Sbjct: 928 PAGPLGEPGKEGPPGLRGDPGAHG 951



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 45/90 (50%), Gaps = 12/90 (13%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKG 164
            P G  GP G  G  G  G  G  GERG++G PG  G PG QG  G  G        GP+G
Sbjct: 1042 PVGEAGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGASGTPGPVGATGDAGPRG 1101

Query: 165  DMGYPGPQGIPGDEGKR------GPKGDMG 188
            D G  GP G PG  GKR      GP+GD G
Sbjct: 1102 DPGSRGPVGPPGRAGKRGLPGPQGPRGDKG 1131



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 82/222 (36%), Gaps = 87/222 (39%)

Query: 127  KGEMGVKGERGEKGAP------GVVGPPGPQGIPGDEGKR---GPKGDMGYPGPQGI--- 174
            KGE G  G++G+ G+P      G  GP GP G+PG +G R   GP G  G+PG  G    
Sbjct: 860  KGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGP 919

Query: 175  ---------------PGDEGKRGPKGDMGYPGRI-------------------------- 193
                           PG EG  G +GD G  GRI                          
Sbjct: 920  PGPTGAPGPAGPLGEPGKEGPPGLRGDPGAHGRIGDRGPAGPPGGPGDKGDSGEDGQPGP 979

Query: 194  -------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKD----------- 223
                               G  G  G+PG PG  G PG+ G  G PG             
Sbjct: 980  DGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKAGPTGAPGDKGPSGPVGPPGA 1039

Query: 224  ----GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                G  G +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 1040 NGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1081



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 81/218 (37%), Gaps = 81/218 (37%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMG------------------VKGERGEKGAPGVVGPPG 149
            E  P GL GP G +G  G++GE G                  VKGE GE G  G  G PG
Sbjct: 817  EPGPRGLVGPPGSRGTPGSRGENGPTGAVGFAGPPGPDGQPGVKGEPGEPGQKGDAGSPG 876

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD------------- 196
            PQG+ G  G  GP G        G+ G  G +GP G  G+PG  G               
Sbjct: 877  PQGLAGSPGPHGPNGV------PGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAG 930

Query: 197  --GRDGLPGEPGLDGIPG------------------------------------------ 212
              G  G  G PGL G PG                                          
Sbjct: 931  PLGEPGKEGPPGLRGDPGAHGRIGDRGPAGPPGGPGDKGDSGEDGQPGPDGPPGPAGTTG 990

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            + G+ G+PG+ G  G  G+PG  GT G+ G TG  G++
Sbjct: 991  QRGIVGMPGQRGERGMPGLPGPAGTPGKAGPTGAPGDK 1028


>gi|297264514|ref|XP_002799008.1| PREDICTED: collagen alpha-2(V) chain-like [Macaca mulatta]
          Length = 1437

 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 92/170 (54%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G++G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQLGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 94/217 (43%), Gaps = 54/217 (24%)

Query: 101 GFCNSTKEYCPPGLQG------------PIGQKGEIGAKGEMGVKG-------------- 134
           G   +  +  PPGLQG            P G +G IG KG  G  G              
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 135 -------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------GIPGDEGKR 181
                  E+GE G  G+VGPPG +G PG  G+ GP G +G+ GPQ      G+ G+ G+ 
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEP 866

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG----------- 230
           G KGD G PG  GL G  G  G  G+ G+ G  G  G PG  G PG  G           
Sbjct: 867 GQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGPD 926

Query: 231 ----IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                 GT G  G  GM G RG RG  G+ G  GTP 
Sbjct: 927 GPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPG 963



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 89/198 (44%), Gaps = 54/198 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPKGDM-- 166
           PG+ G  G+KG  G  G  G KG  G  G PG  GPPG QG+PG+    G  GPKGD   
Sbjct: 722 PGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGG 781

Query: 167 ----------------------------------GYPGPQGI---------PGDEGKRGP 183
                                             G PGP+G+         PG  G+ GP
Sbjct: 782 IGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGP 841

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G +G+ G  G DG+ G+ GEPG    PG+ G  G PG  GL    G PG +G NG  G+
Sbjct: 842 TGAVGFAGPQGPDGQPGVKGEPGE---PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGL 895

Query: 244 TGPRGNRGKSGINGVPGT 261
            G RG +G  G  G PG+
Sbjct: 896 KGGRGTQGPPGATGFPGS 913



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 326

Query: 179 GK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
           G     GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GSMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 387 GEAGPTGARGPEGPQGQRGET 407



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 86/194 (44%), Gaps = 43/194 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL----------------------------- 195
            P G   +PG +G RG   P G  G+PG  G                              
Sbjct: 886  PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGPDGPPGPAGTTGQRGIVGMPG 945

Query: 196  -DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG-------KDGIPGTNGTNGEKGMTGPR 247
              G  G+PG PG  G PG+ G  G  G  G PG         G  G +GT G  G  G R
Sbjct: 946  QRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPXXXXXXXXGPAGNDGTPGRDGAVGER 1005

Query: 248  GNRGKSGINGVPGT 261
            G+RG  G  G+PG+
Sbjct: 1006 GDRGDPGPAGLPGS 1019



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 88/182 (48%), Gaps = 36/182 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G    KGE G  G+ G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGSMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP-- 226
            G  G+P   GK GP G +G PG  G  G  G+ GE G  G  G  G  G  G+ G P  
Sbjct: 356 RGAHGMP---GKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412

Query: 227 ----------GKDGIPGTNGTNGEKGM------------------TGPRGNRGKSGINGV 258
                     G DG PG  G  G  G                   TGP+G RG+ G  GV
Sbjct: 413 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQLGDPGV 472

Query: 259 PG 260
           PG
Sbjct: 473 PG 474



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 79/166 (47%), Gaps = 27/166 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G P   G+ G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR---------------- 213
           GPQG+ G  G  GP    G PG  G  G  G PG  G  G  GR                
Sbjct: 876 GPQGLAGSPGPHGPN---GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGPDGPPGPA 932

Query: 214 -----NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                 G+ G+PG+ G  G  G+PG  GT G+ G TG  G++G  G
Sbjct: 933 GTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPG 978



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 76/153 (49%), Gaps = 28/153 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG-------VVGPPGPQGIPGDEGKRGPKG 164
            PGL GP G  G++G  G  G      +KG PG         GP G  G PG +G  G +G
Sbjct: 953  PGLPGPAGTPGKVGPTGATG------DKGPPGPXXXXXXXXGPAGNDGTPGRDGAVGERG 1006

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            D G PGP G+PG +G        G PG +      G PG+ G  G PG  G  G PG+  
Sbjct: 1007 DRGDPGPAGLPGSQGA------PGTPGPV------GAPGDAGQRGDPGSRGPIGPPGRA- 1053

Query: 225  LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1054 --GKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1084



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 996  PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1055

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1056 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1085



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGTRGPEGPPGKPGEDGEPGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 272 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGSMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 332 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 392 TGARGPEGPQGQRG 405



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 85/212 (40%), Gaps = 70/212 (33%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGIPGDEGKRG---PK 163
            G  GP G  G+ G KGE G  G++G+ G+PG        GP GP G+PG +G RG   P 
Sbjct: 846  GFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPP 905

Query: 164  GDMGYPGP------------------------------------QGIPGDEGKRGPKGDM 187
            G  G+PG                                     +G+PG  G        
Sbjct: 906  GATGFPGSAGRVGPPGPAGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGP------A 959

Query: 188  GYPGRIGLDGRDGLPGEPGL-------------DGIPGRNGM------DGIPGKDGLPGK 228
            G PG++G  G  G  G PG              DG PGR+G        G PG  GLPG 
Sbjct: 960  GTPGKVGPTGATGDKGPPGPXXXXXXXXGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1019

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PGT G  G  G  G RG+ G  G  G PG
Sbjct: 1020 QGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPG 1051



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 83/206 (40%), Gaps = 57/206 (27%)

Query: 113 GLQGPIGQ------KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKR 160
           GL+GP G+      KGE G  G MG  G  G +G PG  G  GPQG PG        GK 
Sbjct: 306 GLEGPKGEVGAPGSKGEAGPTGSMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKP 365

Query: 161 GPKGDMGYPGPQGIPGDE---------GKRGPKGDMGYPGRIGLD------------GRD 199
           GP G +G PG  G PG+          G RGP+G  G  G  G              G D
Sbjct: 366 GPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTD 425

Query: 200 GLPGEPGLDGIPG------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGE- 240
           G PG  G  G PG                    G  GI G+ G PG  G  G  G  GE 
Sbjct: 426 GTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQLGDPGVPGFKGEAGPKGEP 485

Query: 241 -----KGMTGPRGNRGKSGINGVPGT 261
                +G  GP G  GK G  G PGT
Sbjct: 486 GPHGIQGPIGPPGEEGKRGPRGDPGT 511


>gi|432892159|ref|XP_004075682.1| PREDICTED: otolin-1-A-like [Oryzias latipes]
          Length = 487

 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 91/178 (51%), Gaps = 26/178 (14%)

Query: 102 FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
           FC    E CPP  +GP G KG+   +G  G  GERG  GAPG+ G PG  G  G +G +G
Sbjct: 114 FC----ECCPP-ERGPRGPKGD---RGLEGPPGERGPAGAPGLPGQPGFSGPMGFKGDKG 165

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            KGD GY G  G PG  GK G KGD+GY G  G +G  G+ GE G  G  G NG  G  G
Sbjct: 166 DKGDRGYGGTTGSPGIPGKPGQKGDVGYKGEKGENGLQGVKGERGEKGELGHNGTAGEKG 225

Query: 222 ---------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                          ++G  G+ G  G  G  GE+   GP+G RG+ G  GVPG   I
Sbjct: 226 EPGPEGPVGPPGGALQEGPKGEKGDKGECGIFGER---GPKGERGEPGAPGVPGGMGI 280



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 85/176 (48%), Gaps = 39/176 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---------KRGP 162
           PG +G +G KGE G  G  GVKGERGEKG  G  G  G +G PG EG         + GP
Sbjct: 185 PGQKGDVGYKGEKGENGLQGVKGERGEKGELGHNGTAGEKGEPGPEGPVGPPGGALQEGP 244

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G  G  GI    G+RGPKG+ G P         G PG PG  GIPG NG  G PG 
Sbjct: 245 KGEKGDKGECGI---FGERGPKGERGEP---------GAPGVPGGMGIPGLNGKHGAPGP 292

Query: 223 DGL------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            GL                   G +GI G  G  G++G TG RG RG  G  G  G
Sbjct: 293 VGLRGDQGPPGPPGEPGIRGPSGPEGIRGMPGPKGDRGYTGMRGERGFRGFKGAKG 348


>gi|449508071|ref|XP_002186777.2| PREDICTED: collagen alpha-1(XI) chain isoform 1 [Taeniopygia
           guttata]
          Length = 1807

 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 79/148 (53%), Gaps = 15/148 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G         D G +G +G++G PGP+G  G E
Sbjct: 764 GVKGADGVRGLKGSKGEKGEDGFPGFKG---------DMGLKGDRGEIGQPGPRGEDGPE 814

Query: 179 G---KRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G   + GP GD G  G  G  G+    GLPG PG  G  G  G  G PG +G  G  G+ 
Sbjct: 815 GPKGRSGPSGDPGAAGPAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLH 874

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G++G TGPRG+RG  G  G PG
Sbjct: 875 GKPGPRGQRGPTGPRGSRGPRGPTGKPG 902



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 6/100 (6%)

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           + G PGPQG  G +G  GP G  G  GR G DG  G+PGEPG  G  G +G+ G+PG  G
Sbjct: 555 ESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKG 614

Query: 225 LPG------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G        G+PG +G+ GE G  GPRG  G++G  G+
Sbjct: 615 NRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGL 654



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 97/281 (34%), Gaps = 120/281 (42%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEG 158
           E   PG QGP G +G  G  G+ G +G  G  GA G+ G PG +G         +PGD+G
Sbjct: 555 ESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKG 614

Query: 159 KRG---------------PKGDMGYPGPQGIPGDEGKR---------------------- 181
            RG                +G+ G  GP+G+PG+ G R                      
Sbjct: 615 NRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGLLGPRGTPGPPGQPGIAGIDG 674

Query: 182 --GPKGDM------------------------------------GYPGRIGLDGRDGLPG 203
             GPKG+M                                    G PG  GL G DG PG
Sbjct: 675 PSGPKGNMGPQGEPGPPGQQGIPGPQGLPGPQGPIGPPGEKGPQGKPGLPGLPGSDGPPG 734

Query: 204 EP------------------------------GLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            P                              G DG+ G  G  G  G+DG PG  G  G
Sbjct: 735 HPGKEGQSGDKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMG 794

Query: 234 TNGTNGEKGMTGPRGN------RGKSGINGVPGTPAICAYK 268
             G  GE G  GPRG       +G+SG +G PG       K
Sbjct: 795 LKGDRGEIGQPGPRGEDGPEGPKGRSGPSGDPGAAGPAGEK 835



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 59/125 (47%), Gaps = 24/125 (19%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  G +GE G KGE G +GAPG  GP GPQG     GK GP+G  G PGP G  G  G  
Sbjct: 1370 GAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGP---AGKPGPEGLRGIPGPVGEQGMPGAP 1426

Query: 182  ---------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                                 G KG+ G+PG IGL G  G  GE G  G+PG  G  G  
Sbjct: 1427 GQGGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGAK 1486

Query: 221  GKDGL 225
            G  G+
Sbjct: 1487 GDAGI 1491



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 64/134 (47%), Gaps = 36/134 (26%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------- 152
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G                 
Sbjct: 773 GLKGSKGEKGEDGFPGFKGDMGLKGDRGEIGQPGPRGEDGPEGPKGRSGPSGDPGAAGPA 832

Query: 153 ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIGLD 196
                     +PG  G++GPKG  G+PG  G  G++G RG      P+G  G  G  G  
Sbjct: 833 GEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLHGKPGPRGQRGPTGPRGSR 892

Query: 197 GRDGLPGEPGLDGI 210
           G  G  G+PG  G 
Sbjct: 893 GPRGPTGKPGPKGT 906



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 61/145 (42%), Gaps = 45/145 (31%)

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------- 179
            G  G  G PGPQG+PG   K GP G  G+PG +G+PG +G                    
Sbjct: 1004 GKEGAKGDPGPQGVPG---KDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPMGSP 1060

Query: 180  -KRGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
             +RG  G                     + G PG  G  G  G  G  G  G+PG  G  
Sbjct: 1061 GERGAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGIQGPVGLPGPAGPS 1120

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG+DG  G+ G PG  G+ G+KG
Sbjct: 1121 GSPGEDGDKGEIGEPGQKGSKGDKG 1145



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
           PGL G  G++G  G+ G  G  G  GEKGA G+ G PGP+G     G  G RGP+G  G 
Sbjct: 841 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLHGKPGPRGQRGPTGPRGSRGPRGPTGK 900

Query: 169 PGPQGI 174
           PGP+G 
Sbjct: 901 PGPKGT 906



 Score = 42.7 bits (99), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 56/150 (37%), Gaps = 57/150 (38%)

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG-------------------- 197
            GK G KGD   PGPQG+P   GK GP G  G+PG  GL G                    
Sbjct: 1004 GKEGAKGD---PGPQGVP---GKDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPM 1057

Query: 198  -------------------------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                                             G PGE G  G  GR+G+ G  G  G  
Sbjct: 1058 GSPGERGAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGIQGPVGLPGPA 1117

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G PG +G  GE G  G +G++G  G N
Sbjct: 1118 GPSGSPGEDGDKGEIGEPGQKGSKGDKGDN 1147



 Score = 42.7 bits (99), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 85/194 (43%), Gaps = 36/194 (18%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------- 147
              ++GF     E   PG QGP G KG  G +G  G  G  GE+GA G  GP         
Sbjct: 1024 AGLRGFPG---ERGLPGAQGPAGLKGGEGPQGPPGPMGSPGERGAAGTAGPIGLPGRPGP 1080

Query: 148  ------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                   G +G PG++G +GP G  G  GP G+P      GP G  G PG  G  G  G 
Sbjct: 1081 QGPPGPAGEKGAPGEKGPQGPAGRDGIQGPVGLP------GPAGPSGSPGEDGDKGEIGE 1134

Query: 202  PGEPGLDGIPGRNGMD------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PG+ G  G  G NG              GI G DG PG  G  G  G  G++G  G  G 
Sbjct: 1135 PGQKGSKGDKGDNGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGPRGFPGP 1194

Query: 250  RGKSGINGVPGTPA 263
             G  G+ G+PG P 
Sbjct: 1195 PGPIGLQGLPGPPG 1208


>gi|334346840|ref|XP_001375157.2| PREDICTED: collagen alpha-2(IV) chain-like [Monodelphis domestica]
          Length = 1680

 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 114/224 (50%), Gaps = 31/224 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG   P G KGE+G+ G  G +G +G  G PG  G PG  G+PG++G RG +G MGY G 
Sbjct: 1269 PGPSAPPGIKGEVGSPGLPGERGPKGWVGDPGTQGRPGVYGLPGEKGPRGQQGLMGYHGI 1328

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-------EPGLDGIPGRNG--------- 215
             G  GD G +GPKGD G+PG  G  G  G+PG       EPG+ G  GR G         
Sbjct: 1329 PGSSGDRGPKGPKGDRGFPGTPGTMGSPGIPGIPLKIVTEPGVAGPHGRRGPPGIQGEMG 1388

Query: 216  ---------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                     + G+PGK G  G+ G+    G  G++G+ G +G  G+ G  G PG+P +  
Sbjct: 1389 PQGPPGDPGLRGLPGKPGPQGRGGMSALPGFRGDQGLMGHQGPVGQEGEPGRPGSPGLPG 1448

Query: 267  YKRESCS----LLPNSETSQLLIPPTIVGSEHIFSSSPIVVREG 306
                S S    L+ +S+T Q  + P  VG   ++S   ++  EG
Sbjct: 1449 MPGRSVSIGYLLVKHSQTDQEPMCP--VGMNKLWSGYSLLYFEG 1490



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 75/131 (57%), Gaps = 9/131 (6%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
           G +G++G PG+ GP G  G+PGD G RG   D+G PGP G+ G +G RG  G +G  GR 
Sbjct: 813 GPKGQEGLPGLPGPSGFAGLPGDRGDRG---DIGVPGPVGMKGLDGDRGDTGFIGEQGRT 869

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G  G+PG+PGL   PG  G  G PG DG  G  GI G +G  G KG     GN G  
Sbjct: 870 GEPGFQGIPGKPGL---PGPKGFKGSPGMDGFKGMLGIKGRSGIIGYKGEV---GNFGIP 923

Query: 254 GINGVPGTPAI 264
           G  G+PG P +
Sbjct: 924 GFKGLPGEPGL 934



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 95/205 (46%), Gaps = 32/205 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            V ++GF         PG  G IG +G  GA G  G+ G  G  G PG+VGP G +G+PG
Sbjct: 683 FVGLKGFQGDAGREGFPGPPGFIGPRGSKGAIGLPGLDGNPGSTGVPGLVGPTGQKGLPG 742

Query: 156 D--EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD-------------- 199
           +    + G  GD G PG  G+ G+ G RGP G  G PG  G+ G                
Sbjct: 743 EVLGAQTGFPGDSGLPGVPGLKGEPGSRGPPGFRGSPGMPGMPGLKGQPGFPGPSGPPGL 802

Query: 200 ----------GLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
                     G  G+ GL G+PG +G  G+PG        G+PG  G+ G +G  G+ G 
Sbjct: 803 PGPPGTHGFPGPKGQEGLPGLPGPSGFAGLPGDRGDRGDIGVPGPVGMKGLDGDRGDTGF 862

Query: 244 TGPRGNRGKSGINGVPGTPAICAYK 268
            G +G  G+ G  G+PG P +   K
Sbjct: 863 IGEQGRTGEPGFQGIPGKPGLPGPK 887



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 84/151 (55%), Gaps = 5/151 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G +G  G  G KG  G KG  G+ G  G++G  G QG+PG +G+ G  G  G  GP
Sbjct: 1071 PGVKGELGISGLGGEKGFTGEKGLSGDHGFIGLMGLTGSQGLPGLKGQTGFPGLTGLQGP 1130

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG PG  G  G KGD+G+PG  GL G  G  G  GL G+PG  G+ G PG +G  G  G 
Sbjct: 1131 QGDPGRAGPPGEKGDLGWPGIPGLSGFPGSRGISGLHGLPGTKGLPGSPGAEGY-GNPGF 1189

Query: 232  PGTNGTNGEKG----MTGPRGNRGKSGINGV 258
            PG  G  GE+G    + GP G  G+ G  G 
Sbjct: 1190 PGPFGDKGERGEPNTIPGPLGAPGQKGERGA 1220



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/124 (46%), Positives = 71/124 (57%), Gaps = 6/124 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G++G +G  G+ G  G  GE G PG  GP GP G PG +G +GP+GD+G PGP G P   
Sbjct: 270 GEEGIVGFPGQRGWPGLNGEPGEPGQRGPSGPSGFPGSDGIKGPRGDIGDPGPPGQP--S 327

Query: 179 GKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
               P   KG  G PG  G+ G DG PGEPG  G PG +G+DG   + GLPG+ G  G  
Sbjct: 328 YSHHPSIMKGVKGEPGTPGVRGPDGRPGEPGEAGQPGTSGIDGDE-RRGLPGEMGAKGFR 386

Query: 236 GTNG 239
           G  G
Sbjct: 387 GEPG 390



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 87/188 (46%), Gaps = 32/188 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMGY 168
           PG +G  G  G  G  G  G+ G+RG++G  GV GP G +G+ GD G  G    +G  G 
Sbjct: 812 PGPKGQEGLPGLPGPSGFAGLPGDRGDRGDIGVPGPVGMKGLDGDRGDTGFIGEQGRTGE 871

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG QGIPG  G  GPKG  G PG  G  G  G+ G  G+ G  G  G  GIPG  GLPG+
Sbjct: 872 PGFQGIPGKPGLPGPKGFKGSPGMDGFKGMLGIKGRSGIIGYKGEVGNFGIPGFKGLPGE 931

Query: 229 DG-----------------IPGTNGTNGEKGMTGPRGNRGKSGIN------------GVP 259
            G                 +PG     GEKG  GP G +G  G              G+P
Sbjct: 932 PGLKGSRGEPGPPGDPPKFLPGMKDFKGEKGDEGPTGGKGFWGTKGGQGMPGMPGQTGIP 991

Query: 260 GTPAICAY 267
           G P I  Y
Sbjct: 992 GLPGIPGY 999



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 87/166 (52%), Gaps = 16/166 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD----------EGKRG 161
            PGLQG  GQ G  G +G  G  G RG+KG PG  G  G  G  GD           G+ G
Sbjct: 1013 PGLQGFPGQIGSPGIRGFPGFVGVRGDKGMPGREGLYGETGTIGDYGDEGDTINLPGRPG 1072

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             KG++G  G  G  G  G++G  GD G+ G +GL G  GLPG  G  G PG  G+ G   
Sbjct: 1073 VKGELGISGLGGEKGFTGEKGLSGDHGFIGLMGLTGSQGLPGLKGQTGFPGLTGLQG--- 1129

Query: 222  KDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G PG+ G PG  G     G  G++G  G+RG SG++G+PGT  +
Sbjct: 1130 PQGDPGRAGPPGEKGDLGWPGIPGLSGFPGSRGISGLHGLPGTKGL 1175



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 79/159 (49%), Gaps = 19/159 (11%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            G KGE+G+ G  G +G PG +G PG +G PG  G RG   D G PG +G+ G+ G  G  
Sbjct: 1002 GVKGEIGIPGVPGLQGFPGQIGSPGIRGFPGFVGVRG---DKGMPGREGLYGETGTIGDY 1058

Query: 185  GDMG----YPGR---------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG---K 228
            GD G     PGR          GL G  G  GE GL G  G  G+ G+ G  GLPG   +
Sbjct: 1059 GDEGDTINLPGRPGVKGELGISGLGGEKGFTGEKGLSGDHGFIGLMGLTGSQGLPGLKGQ 1118

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             G PG  G  G +G  G  G  G+ G  G PG P +  +
Sbjct: 1119 TGFPGLTGLQGPQGDPGRAGPPGEKGDLGWPGIPGLSGF 1157



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 74/165 (44%), Gaps = 21/165 (12%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  G KGE+G+ G  GEKG                 G++G  GD G+ G  G+ G +G  
Sbjct: 1069 GRPGVKGELGISGLGGEKGF---------------TGEKGLSGDHGFIGLMGLTGSQGLP 1113

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G KG  G+PG  GL G  G PG  G  G  G  G  GIPG  G PG  GI G +G  G K
Sbjct: 1114 GLKGQTGFPGLTGLQGPQGDPGRAGPPGEKGDLGWPGIPGLSGFPGSRGISGLHGLPGTK 1173

Query: 242  GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
            G+ G  G  G     G PG P     K E     PN+    L  P
Sbjct: 1174 GLPGSPGAEG----YGNPGFPGPFGDKGERGE--PNTIPGPLGAP 1212



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 69/136 (50%), Gaps = 17/136 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G  G  GA G +G+KG +G+ G  G  GPPG        G RG KG +G PG 
Sbjct: 666 PGTKGLRGIPGFPGADGFVGLKGFQGDAGREGFPGPPG------FIGPRGSKGAIGLPGL 719

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE--PGLDGIPGRNGMDGIPGKDGLPGKD 229
            G PG           G PG +G  G+ GLPGE      G PG +G+ G+PG  G PG  
Sbjct: 720 DGNPGS---------TGVPGLVGPTGQKGLPGEVLGAQTGFPGDSGLPGVPGLKGEPGSR 770

Query: 230 GIPGTNGTNGEKGMTG 245
           G PG  G+ G  GM G
Sbjct: 771 GPPGFRGSPGMPGMPG 786



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 72/146 (49%), Gaps = 40/146 (27%)

Query: 109  YCPPGLQGPIGQKGEI---------GAKGEMGVKGERGEKGAPGVVGPPGPQGIP----- 154
            Y  PG +GP GQ+G +         G +G  G KG+RG  G PG +G PG  GIP     
Sbjct: 1308 YGLPGEKGPRGQQGLMGYHGIPGSSGDRGPKGPKGDRGFPGTPGTMGSPGIPGIPLKIVT 1367

Query: 155  -----GDEGKRGP---KGDM---------------GYPGPQGIPGDE---GKRGPKGDMG 188
                 G  G+RGP   +G+M               G PGPQG  G     G RG +G MG
Sbjct: 1368 EPGVAGPHGRRGPPGIQGEMGPQGPPGDPGLRGLPGKPGPQGRGGMSALPGFRGDQGLMG 1427

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRN 214
            + G +G +G  G PG PGL G+PGR+
Sbjct: 1428 HQGPVGQEGEPGRPGSPGLPGMPGRS 1453



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 83/178 (46%), Gaps = 40/178 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVK--------GERGEKGAPGVVGPPGPQGIPGDEGKRGP-- 162
            GL G  G KG  G+ G  G          G++GE+G P  +  PGP G PG +G+RG   
Sbjct: 1165 GLHGLPGTKGLPGSPGAEGYGNPGFPGPFGDKGERGEPNTI--PGPLGAPGQKGERGAQG 1222

Query: 163  ----------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---G 209
                      +G  G+  P  I       G  GD G PG  GL G  GLPG PG     G
Sbjct: 1223 GQGPSGSPGIQGHPGFTAPSNI------SGLPGDKGAPGLFGLQGYRGLPGTPGPSAPPG 1276

Query: 210  IPGRNGMDGIPGKDGL------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            I G  G  G+PG+ G       PG  G PG  G  GEK   GPRG +G  G +G+PG+
Sbjct: 1277 IKGEVGSPGLPGERGPKGWVGDPGTQGRPGVYGLPGEK---GPRGQQGLMGYHGIPGS 1331



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 76/175 (43%), Gaps = 55/175 (31%)

Query: 112 P----------GLQGPIGQKGEIGAKGEMGVKGERGEKGAP------------------- 142
           P          GL+G  G  G  G  G  G +G++G KG P                   
Sbjct: 414 PGLPGPDGFLFGLKGAEGSVGSPGPSGFPGARGQKGWKGDPGDCKCEVSSVGLPGPPGPI 473

Query: 143 ------------GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG------KRGPK 184
                       G +G PGP GIPG  G    KG  G PG  G+ G +G       +G +
Sbjct: 474 GLPGTNGEPGRKGEIGDPGPHGIPGFSGS---KGSTGAPGAAGLKGQKGDSRTITTKGSR 530

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPG-----RNGMDGIPGKDGLPGKDGIPGT 234
           GD G PG  GL+G DG PG+ GLDG PG      +G+ GIPG  G PG  G+ GT
Sbjct: 531 GDQGIPGIPGLEGEDGFPGQDGLDGFPGLPGLPGDGIKGIPGDAGFPGLPGLKGT 585



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 104/273 (38%), Gaps = 90/273 (32%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + GF  S      PG  G  GQKG+      +  KG RG++G PG+ G  G  G PG +
Sbjct: 495 GIPGFSGSKGSTGAPGAAGLKGQKGD---SRTITTKGSRGDQGIPGIPGLEGEDGFPGQD 551

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD-----------------G 200
           G        G+PG  G+PGD G +G  GD G+PG  GL G                   G
Sbjct: 552 GLD------GFPGLPGLPGD-GIKGIPGDAGFPGLPGLKGTPGELGPPGLGLPGPKGARG 604

Query: 201 LPGEPGLD------------------------------------------GIPGRNGMDG 218
           LPG+PGLD                                          G PG  G+ G
Sbjct: 605 LPGDPGLDGSPGFPGPPGPPGTLGQTDCDEGVKRPIGQEIIQPGCIRAPKGSPGLPGLPG 664

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMT---------------GPRGNRGKSGINGVPGTPA 263
            PG  GL G  G PG +G  G KG                 GPRG++G  G+ G+ G P 
Sbjct: 665 SPGTKGLRGIPGFPGADGFVGLKGFQGDAGREGFPGPPGFIGPRGSKGAIGLPGLDGNPG 724

Query: 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIF 296
                     L+    T Q  +P  ++G++  F
Sbjct: 725 STGVP----GLV--GPTGQKGLPGEVLGAQTGF 751



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 93/216 (43%), Gaps = 37/216 (17%)

Query: 86   VWLNAYSRIP-LVAMQGFCNSTKEYCP---PGLQGPIGQKGEIGAKGEMGVKGERGEKGA 141
            + L     +P L    GF   T    P   PG  GP G+KG++G  G  G+ G  G +G 
Sbjct: 1104 MGLTGSQGLPGLKGQTGFPGLTGLQGPQGDPGRAGPPGEKGDLGWPGIPGLSGFPGSRGI 1163

Query: 142  PGVVGPPGPQGIPGDEGKRG--------PKGDMG-------YPGPQGIPGDEGKRGPKGD 186
             G+ G PG +G+PG  G  G        P GD G        PGP G PG +G+RG +G 
Sbjct: 1164 SGLHGLPGTKGLPGSPGAEGYGNPGFPGPFGDKGERGEPNTIPGPLGAPGQKGERGAQGG 1223

Query: 187  ---------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG---IPGT 234
                      G+PG        GLPG+    G PG  G+ G     GLPG  G    PG 
Sbjct: 1224 QGPSGSPGIQGHPGFTAPSNISGLPGD---KGAPGLFGLQGY---RGLPGTPGPSAPPGI 1277

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G  G  G+ G RG +G  G  G  G P +     E
Sbjct: 1278 KGEVGSPGLPGERGPKGWVGDPGTQGRPGVYGLPGE 1313



 Score = 45.8 bits (107), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 82/189 (43%), Gaps = 58/189 (30%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIP----------------------------------- 154
           +G  GE+GEKG    +G  GP G+P                                   
Sbjct: 210 LGFYGEKGEKGD---IGRAGPTGLPSDGDRATSITDNVVDQPDQYKGEKGNWGEPGWKGY 266

Query: 155 ---GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD------GRDGLPGEP 205
              G+EG  G  G  G+PG  G PG+ G+RGP G  G+PG  G+       G  G PG+P
Sbjct: 267 SEKGEEGIVGFPGQRGWPGLNGEPGEPGQRGPSGPSGFPGSDGIKGPRGDIGDPGPPGQP 326

Query: 206 ----------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                     G+ G PG  G+ G  G+ G PG+ G PGT+G +G++   G  G  G  G 
Sbjct: 327 SYSHHPSIMKGVKGEPGTPGVRGPDGRPGEPGEAGQPGTSGIDGDE-RRGLPGEMGAKGF 385

Query: 256 NGVPGTPAI 264
            G PG PA+
Sbjct: 386 RGEPGFPAL 394



 Score = 45.8 bits (107), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 58/122 (47%), Gaps = 5/122 (4%)

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           R PKG  G PG  G PG +G RG  G  G  G +GL G  G  G  G  G PG  G  G 
Sbjct: 651 RAPKGSPGLPGLPGSPGTKGLRGIPGFPGADGFVGLKGFQGDAGREGFPGPPGFIGPRGS 710

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG-----KSGINGVPGTPAICAYKRESCSL 274
            G  GLPG DG PG+ G  G  G TG +G  G     ++G  G  G P +   K E  S 
Sbjct: 711 KGAIGLPGLDGNPGSTGVPGLVGPTGQKGLPGEVLGAQTGFPGDSGLPGVPGLKGEPGSR 770

Query: 275 LP 276
            P
Sbjct: 771 GP 772



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 93/195 (47%), Gaps = 44/195 (22%)

Query: 112  PGLQGPIGQKGEIGA---KGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL GP G KG  G    KG +G+KG  G    KG  G  G PG +G+PG+ G +G +G+
Sbjct: 881  PGLPGPKGFKGSPGMDGFKGMLGIKGRSGIIGYKGEVGNFGIPGFKGLPGEPGLKGSRGE 940

Query: 166  MG--------YPGPQGIPGDEGKRGPKGDMGY------------------------PGRI 193
             G         PG +   G++G  GP G  G+                        PG I
Sbjct: 941  PGPPGDPPKFLPGMKDFKGEKGDEGPTGGKGFWGTKGGQGMPGMPGQTGIPGLPGIPGYI 1000

Query: 194  -GLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             G+ G  G+PG PGL G PG+ G  GI   PG  G+ G  G+PG  G  GE G  G  G+
Sbjct: 1001 KGVKGEIGIPGVPGLQGFPGQIGSPGIRGFPGFVGVRGDKGMPGREGLYGETGTIGDYGD 1060

Query: 250  RGKSGINGVPGTPAI 264
             G + IN +PG P +
Sbjct: 1061 EGDT-IN-LPGRPGV 1073



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 137  GEKGAPGVV-GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
            G  G PG + G  G  GIPG  G +G  G +G PG +G PG  G R   GD G PGR GL
Sbjct: 992  GLPGIPGYIKGVKGEIGIPGVPGLQGFPGQIGSPGIRGFPGFVGVR---GDKGMPGREGL 1048

Query: 196  DGRDGLPGE----------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G  G  G+          PG  G+ G  G+ G+ G+ G  G+ G+ G +G  G  G+TG
Sbjct: 1049 YGETGTIGDYGDEGDTINLPGRPGVKGELGISGLGGEKGFTGEKGLSGDHGFIGLMGLTG 1108

Query: 246  PRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
             +G  G  G  G PG   +   + +     P  E   L  P
Sbjct: 1109 SQGLPGLKGQTGFPGLTGLQGPQGDPGRAGPPGEKGDLGWP 1149



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 87/201 (43%), Gaps = 57/201 (28%)

Query: 112 PGLQGPIGQKGEIGAKG-----------------EMGVKGERGEKGAPGVVGPPGPQGIP 154
           PG++GP G+ GE G  G                 EMG KG RGE G P +   PGP   P
Sbjct: 345 PGVRGPDGRPGEPGEAGQPGTSGIDGDERRGLPGEMGAKGFRGEPGFPALY--PGP---P 399

Query: 155 GDE----------------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG---- 188
           G +                      G +G +G +G PGP G PG  G++G KGD G    
Sbjct: 400 GRDGIPGPQGPQGPPGLPGPDGFLFGLKGAEGSVGSPGPSGFPGARGQKGWKGDPGDCKC 459

Query: 189 ------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                  PG  G  G  G  GEPG  G  G  G  GIPG  G  G  G PG  G  G+KG
Sbjct: 460 EVSSVGLPGPPGPIGLPGTNGEPGRKGEIGDPGPHGIPGFSGSKGSTGAPGAAGLKGQKG 519

Query: 243 ---MTGPRGNRGKSGINGVPG 260
                  +G+RG  GI G+PG
Sbjct: 520 DSRTITTKGSRGDQGIPGIPG 540



 Score = 39.3 bits (90), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 46/99 (46%), Gaps = 33/99 (33%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G +G+ G  G  G  GPPG QGIPG +G++G KG+ G PG           GPKGD+G
Sbjct: 33  EKGARGQPGSVGPQGYNGPPGLQGIPGLQGRKGDKGERGAPG---------ITGPKGDVG 83

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
                                   + G+ G PG DG+PG
Sbjct: 84  ------------------------QRGVSGFPGADGIPG 98


>gi|281371499|ref|NP_445940.1| collagen, type V, alpha 2 precursor [Rattus norvegicus]
          Length = 1497

 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 470 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 520

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 521 APGNRGFPGSDGLPGPKGAQGERGPIGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 580

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 581 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPG 637



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 92/170 (54%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G++G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 457 GPQGIRGQLGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 513

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 514 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPIGSSGPKGGQGDPGR---PGEPGLPGAR 570

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 571 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 620



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 77/161 (47%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  GA G  GP GP G  G  G R
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGNKGLEGPKGEVGAPGAKGEAGPTGPMGAMGPLGPR 336

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G+ G  GPQG PG  G  G  G  G  G +G+ G  G PG PG+ G  G  G  G  
Sbjct: 337 GMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGVKGEAGPTGARGPE 396

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G+ G PG  G++G  G  G  G  G  G  G PGT
Sbjct: 397 GPQGQRGETGPPGPAGSHGLPGAVGTDGTPGAKGPTGSPGT 437



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G++G  GPKG++G PG +G  G  
Sbjct: 265 GEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGNKGLEGPKGEVGAPGAKGEAGPT 324

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 325 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGVK 384

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G  GP+G RG++G  G  G+
Sbjct: 385 GEAGPTGARGPEGPQGQRGETGPPGPAGS 413



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 86/164 (52%), Gaps = 9/164 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGNKG---LEGPKGEVGAPGAKGEAGPTGPMGAMGPL 333

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G  G  G PG  G  GIPG +G  G PG  G  G  
Sbjct: 334 GPRGMPGERGRLGPQ---GAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGVKGEAGPT 390

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           G  G  G  G++G TGP G  G  G+ G  GT      K  + S
Sbjct: 391 GARGPEGPQGQRGETGPPGPAGSHGLPGAVGTDGTPGAKGPTGS 434



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 94/173 (54%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------ 154
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +G+P      
Sbjct: 745 GPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGSLGPP 804

Query: 155 ------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                 G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 805 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 863

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G +G  G+ G RG +G  G  G PG+
Sbjct: 864 --PGQKGDAGSPGPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGS 911



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 87/210 (41%), Gaps = 60/210 (28%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-------- 149
            ++G    T    P G QG  G+ G  G  G  G+ G  G  G PG  GP G        
Sbjct: 382 GVKGEAGPTGARGPEGPQGQRGETGPPGPAGSHGLPGAVGTDGTPGAKGPTGSPGTSGPP 441

Query: 150 ----------------PQGI---------PGDEGKRGPKGDMGYPGPQGI------PGDE 178
                           PQGI         PG +G+ GPKG+   PGP GI      PG+E
Sbjct: 442 GLAGPPGSPGPQGSTGPQGIRGQLGDPGVPGFKGEAGPKGE---PGPHGIQGPIGPPGEE 498

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           GKRGP+GD                  PG  G PG  G  G PG  G PG DG+PG  G  
Sbjct: 499 GKRGPRGD------------------PGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQ 540

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           GE+G  G  G +G  G  G PG P +   +
Sbjct: 541 GERGPIGSSGPKGGQGDPGRPGEPGLPGAR 570



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 987  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1040

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1041 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGE 1100

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1101 PGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1144



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 91/189 (48%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 576 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGV 635

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 636 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 695

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PGEPG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+GN G +G  G  G 
Sbjct: 696 PGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGP 755

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 756 PGLQGMPGE 764



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/182 (42%), Positives = 89/182 (48%), Gaps = 27/182 (14%)

Query: 113 GLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEG------KR 160
           GL+GP G+ G  GAKGE      MG  G  G +G PG  G  GPQG PG  G      K 
Sbjct: 304 GLEGPKGEVGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKP 363

Query: 161 GPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GP G +G PG  G PG+   +G+ GP G  G  G  G  G  G PG  G  G+PG  G D
Sbjct: 364 GPMGPLGIPGSSGFPGNPGVKGEAGPTGARGPEGPQGQRGETGPPGPAGSHGLPGAVGTD 423

Query: 218 GIPGKDGLPGKDGIPGT---------NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G PG     G  G PGT          G+ G +G TGP+G RG+ G  GVPG       K
Sbjct: 424 GTPGAK---GPTGSPGTSGPPGLAGPPGSPGPQGSTGPQGIRGQLGDPGVPGFKGEAGPK 480

Query: 269 RE 270
            E
Sbjct: 481 GE 482



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 75/156 (48%), Gaps = 21/156 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK---------------GERGEKG 140
           L  M G         P G +G +G+KG  G  G  G +               GE+GE G
Sbjct: 758 LQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGSLGPPGPAGPTGEKGEPG 817

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------GIPGDEGKRGPKGDMGYPGRIG 194
             G+VGPPG +G PG  G+ GP G +G+ GPQ      G+ G+ G+ G KGD G PG  G
Sbjct: 818 PRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQG 877

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           L G  G  G  G+ G+ G  G  G PG  G PG  G
Sbjct: 878 LAGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGSAG 913



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 87/201 (43%), Gaps = 39/201 (19%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGI 153
           V   G         P G  GP+G +G  G +G +G +G  G++GA   PG  GP GP GI
Sbjct: 312 VGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGI 371

Query: 154 PGD---------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           PG          +G+ GP G  G  GPQG  G+ G  GP G  G PG +G    DG PG 
Sbjct: 372 PGSSGFPGNPGVKGEAGPTGARGPEGPQGQRGETGPPGPAGSHGLPGAVGT---DGTPGA 428

Query: 205 PGLDGIPG------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGE------ 240
            G  G PG                    G  GI G+ G PG  G  G  G  GE      
Sbjct: 429 KGPTGSPGTSGPPGLAGPPGSPGPQGSTGPQGIRGQLGDPGVPGFKGEAGPKGEPGPHGI 488

Query: 241 KGMTGPRGNRGKSGINGVPGT 261
           +G  GP G  GK G  G PGT
Sbjct: 489 QGPIGPPGEEGKRGPRGDPGT 509



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 699 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGL 758

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 759 QGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGSLGPPGPAGPTGEKGEPGP 818

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 819 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 865



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 88/190 (46%), Gaps = 39/190 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 599 PPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 658

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PG+ G     GP+G+ G PG  G
Sbjct: 659 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGEPGAVGPLGPRGERGNPGERG 718

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
             G  GLPGE G+ G  G +G  G PG  G  G  G PG  G  GE+G+    GP+G+RG
Sbjct: 719 EPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRG 778

Query: 252 KSGINGVPGT 261
             G  G  GT
Sbjct: 779 GVGEKGAEGT 788



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 71/147 (48%), Gaps = 24/147 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 814 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 873

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 874 GPQGLAGSPGPHGPH------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 927

Query: 216 -MDGIPGKDGLPGKDGIPGTNGTNGEK 241
              G PGK+G PG  G PG++G  G++
Sbjct: 928 GPIGEPGKEGPPGLRGDPGSHGRVGDR 954



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 85/197 (43%), Gaps = 54/197 (27%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKG---------DMGYP 169
           GE GA G +G +GERG   E+G PG+ G PG +G+ G  G  GPKG         D G P
Sbjct: 697 GEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPP 756

Query: 170 GPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDG-------------------------- 200
           G QG+PG+ G     GPKGD G  G  G +G  G                          
Sbjct: 757 GLQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGSLGPPGPAGPTGEKGEP 816

Query: 201 ----LPGEPGLDGIPGRNGMDGIPGK---------DGLPGKDGIPGTNGTNGEKGMTGPR 247
               L G PG  G PG  G +G  G          DG PG  G PG  G  G+ G  GP+
Sbjct: 817 GPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQ 876

Query: 248 GNRGKSGINGVPGTPAI 264
           G  G  G +G  G P +
Sbjct: 877 GLAGSPGPHGPHGVPGL 893



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 70/148 (47%), Gaps = 27/148 (18%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           ++G  G PG VGP GP+G  G+ G+RG  G  G PG +G+ G  G  GPKG+ G  G IG
Sbjct: 692 DQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIG 751

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT----------------- 237
                   G PGL G+PG  G+ G PG  G  G  G  G  GT                 
Sbjct: 752 DT------GPPGLQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGSLGPPG 805

Query: 238 ----NGEKGMTGPRGNRGKSGINGVPGT 261
                GEKG  GPRG  G  G  G PG+
Sbjct: 806 PAGPTGEKGEPGPRGLVGPPGSRGNPGS 833



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 65/140 (46%), Gaps = 39/140 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G  G  G  G +G +G+RG+         PGP G+PG +G        G PGP
Sbjct: 1044 PGPEGPAGNDGTPGRDGAVGERGDRGD---------PGPAGLPGSQGA------PGTPGP 1088

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PGD G+R                  G PG  G  G PGR       GK GLPG  G 
Sbjct: 1089 VGAPGDAGQR------------------GEPGSRGPVGPPGRA------GKRGLPGPQGP 1124

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G NG++G  G +G+RG
Sbjct: 1125 RGDKGDNGDRGDRGQKGHRG 1144



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  G+ G RGP G  G  G 
Sbjct: 1056 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGEPGSRGPVGPPGRAGK 1115

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1116 RGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1145



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 90/233 (38%), Gaps = 84/233 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G P   GP G+PG +G R   GP G  
Sbjct: 847  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHGVPGLKGGRGTQGPPGAT 906

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 907  GFPGSAGRVGPPGPAGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGSPGDK 966

Query: 194  GLDGRD---------------------GLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
            G  G D                     G+PG+ G  G+PG  G  G PGK G        
Sbjct: 967  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 1026

Query: 226  -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                             PG +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 1027 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1079



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 81/198 (40%), Gaps = 63/198 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 824  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 883

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 884  PHGPHGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPIGEPGKEGPPGLRG 943

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 944  DPGSHGRVGDRGPAGPPGSPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1003

Query: 228  KDGIPGTNGTNGEKGMTG 245
              G+PG  GT G+ G TG
Sbjct: 1004 MPGLPGPAGTPGKVGPTG 1021


>gi|384945326|gb|AFI36268.1| collagen alpha-2(V) chain preproprotein [Macaca mulatta]
          Length = 1499

 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 92/170 (54%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G++G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQLGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 326

Query: 179 GK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
           G     GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GSMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 387 GEAGPTGARGPEGPQGQRGET 407



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 88/182 (48%), Gaps = 36/182 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G    KGE G  G+ G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGSMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP-- 226
            G  G+P   GK GP G +G PG  G  G  G+ GE G  G  G  G  G  G+ G P  
Sbjct: 356 RGAHGMP---GKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412

Query: 227 ----------GKDGIPGTNGTNGEKGM------------------TGPRGNRGKSGINGV 258
                     G DG PG  G  G  G                   TGP+G RG+ G  GV
Sbjct: 413 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQLGDPGV 472

Query: 259 PG 260
           PG
Sbjct: 473 PG 474



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGTRGPEGPPGKPGEDGEPGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 272 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGSMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 332 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 392 TGARGPEGPQGQRG 405



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 83/206 (40%), Gaps = 57/206 (27%)

Query: 113 GLQGPIGQ------KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKR 160
           GL+GP G+      KGE G  G MG  G  G +G PG  G  GPQG PG        GK 
Sbjct: 306 GLEGPKGEVGAPGSKGEAGPTGSMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKP 365

Query: 161 GPKGDMGYPGPQGIPGDE---------GKRGPKGDMGYPGRIGLD------------GRD 199
           GP G +G PG  G PG+          G RGP+G  G  G  G              G D
Sbjct: 366 GPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTD 425

Query: 200 GLPGEPGLDGIPG------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGE- 240
           G PG  G  G PG                    G  GI G+ G PG  G  G  G  GE 
Sbjct: 426 GTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQLGDPGVPGFKGEAGPKGEP 485

Query: 241 -----KGMTGPRGNRGKSGINGVPGT 261
                +G  GP G  GK G  G PGT
Sbjct: 486 GPHGIQGPIGPPGEEGKRGPRGDPGT 511



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 87/241 (36%), Gaps = 90/241 (37%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP    G+PG +G R   GP G  
Sbjct: 849  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 908

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 909  GFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 968

Query: 194  ------------------------------GLDGRDGLPGEPGLDGIPGRNGMDGI---- 219
                                          G  G  G+PG PG  G PG+ G  G     
Sbjct: 969  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 1028

Query: 220  -----------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                             PG +G  G DG PG +G  GE+G  G  G  G  G  G PGTP
Sbjct: 1029 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTP 1088

Query: 263  A 263
             
Sbjct: 1089 G 1089



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 81/198 (40%), Gaps = 63/198 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 886  PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 946  DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1005

Query: 228  KDGIPGTNGTNGEKGMTG 245
              G+PG  GT G+ G TG
Sbjct: 1006 MPGLPGPAGTPGKVGPTG 1023


>gi|395512460|ref|XP_003760457.1| PREDICTED: collagen alpha-1(XXII) chain-like [Sarcophilus harrisii]
          Length = 1599

 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 108/240 (45%), Gaps = 77/240 (32%)

Query: 101 GFCNSTKEYCPPG------LQGPIGQKGEIGAKGEMGV----------------KGERGE 138
           GF  +    CPPG      ++GP G KGE G +G+ G+                KGE+GE
Sbjct: 465 GFLKTINCSCPPGEKGERGIEGPRGLKGETGTQGQSGIPGPKGEKGDSGQGTFFKGEKGE 524

Query: 139 KGAPGVVGPPGPQG------------IPGD---EGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           KG+ G+ GPPG +G            +PG+   +G  GP G  G PG  GIPG +G+RG 
Sbjct: 525 KGSMGLSGPPGREGAKGAQGETGEPGLPGEVGLKGPMGPPGQAGLPGQIGIPGLQGERGE 584

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-------------------KDG 224
           +G  G  G  GLDG  G PGE G  G PG  G+ G+ G                   K+G
Sbjct: 585 RGPRGDKGERGLDGFPGKPGEEGKQGSPGTPGVTGLRGEKGELGPPGPPGIPGSVVHKEG 644

Query: 225 LPGKDGIPGTNG------------------TNGEKGMTGPRGNRGKS---GINGVPGTPA 263
           L G+ G PG  G                    G  G+ G RG +G++   GING+PG P 
Sbjct: 645 LKGEQGAPGPRGHQGLPGPPGAPGPMGPEGKEGLPGLQGQRGKKGEAGIPGINGLPGPPG 704



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 108/279 (38%), Gaps = 94/279 (33%)

Query: 102 FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------- 154
           F     E    GL GP G++G  GA+GE G  G  GE G  G +GPPG  G+P       
Sbjct: 518 FKGEKGEKGSMGLSGPPGREGAKGAQGETGEPGLPGEVGLKGPMGPPGQAGLPGQIGIPG 577

Query: 155 --GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG--------------- 197
             G+ G+RGP+GD G  G  G PG  G+ G +G  G PG  GL G               
Sbjct: 578 LQGERGERGPRGDKGERGLDGFPGKPGEEGKQGSPGTPGVTGLRGEKGELGPPGPPGIPG 637

Query: 198 ----RDGLPGE------------------------------PGLD---------GIPGRN 214
               ++GL GE                              PGL          GIPG N
Sbjct: 638 SVVHKEGLKGEQGAPGPRGHQGLPGPPGAPGPMGPEGKEGLPGLQGQRGKKGEAGIPGIN 697

Query: 215 GMDGIPG---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G+ G PG                           K G PG+ G PG +GTNG  G+ GP+
Sbjct: 698 GLPGPPGSQGSPGVPGPPGPVGPPGLPGEIGFSGKPGQPGQPGSPGKDGTNGLPGLQGPK 757

Query: 248 GNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           G  G+ G  G+PG P       E   +    E  ++ +P
Sbjct: 758 GEPGERGEYGLPGNPGPRGEVGEQGLVGMPGEKGEMGLP 796



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/133 (42%), Positives = 74/133 (55%), Gaps = 6/133 (4%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +G  G+ G+ G  G  G +G RG  G  G  G PG  G PG+ G++G KGD G PG  
Sbjct: 1273 GREGSPGKDGDTGPIGPPGTRGLRGAPGKNGSPGSPGDPGQPGNPGQKGNKGDNGSPG-- 1330

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
             +PG +G RGP G+    G  G+ G++G  G+PG  G+ G  G  G+ G+ G  G+ G P
Sbjct: 1331 -LPGFQGPRGPPGEQ---GEKGIPGKEGASGKPGEQGVKGERGDPGVKGEKGAQGQKGHP 1386

Query: 233  GTNGTNGEKGMTG 245
            G  G  G KG TG
Sbjct: 1387 GEPGLPGHKGHTG 1399



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/132 (40%), Positives = 67/132 (50%), Gaps = 3/132 (2%)

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G +G PG +G  GP G  G  G +G PG  G  G  GD G PG  G  G  G  G PGL 
Sbjct: 1273 GREGSPGKDGDTGPIGPPGTRGLRGAPGKNGSPGSPGDPGQPGNPGQKGNKGDNGSPGLP 1332

Query: 209  GIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G  G  G  G  G+ G+PGK+G    PG  G  GE+G  G +G +G  G  G PG P + 
Sbjct: 1333 GFQGPRGPPGEQGEKGIPGKEGASGKPGEQGVKGERGDPGVKGEKGAQGQKGHPGEPGLP 1392

Query: 266  AYKRESCSLLPN 277
             +K  +  + P+
Sbjct: 1393 GHKGHTGLMGPH 1404



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 99/233 (42%), Gaps = 76/233 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG------ERGEKGAPGV--------------------- 144
           PGLQG  G++G  G KGE G+ G      E G++G+PG                      
Sbjct: 576 PGLQGERGERGPRGDKGERGLDGFPGKPGEEGKQGSPGTPGVTGLRGEKGELGPPGPPGI 635

Query: 145 -------------VGPPGP---------------------QGIPGDEGKRGPKGDMGYPG 170
                         G PGP                     +G+PG +G+RG KG+ G PG
Sbjct: 636 PGSVVHKEGLKGEQGAPGPRGHQGLPGPPGAPGPMGPEGKEGLPGLQGQRGKKGEAGIPG 695

Query: 171 PQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G+PG  G +               G  G++G+ G+ G  G+ G PG+ G +G+PG  G
Sbjct: 696 INGLPGPPGSQGSPGVPGPPGPVGPPGLPGEIGFSGKPGQPGQPGSPGKDGTNGLPGLQG 755

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G PG+ G  G  G PG  G  GE+G+ G  G +G+ G+ G PG   +   K
Sbjct: 756 PKGEPGERGEYGLPGNPGPRGEVGEQGLVGMPGEKGEMGLPGSPGLQGLRGEK 808



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 61/134 (45%), Gaps = 33/134 (24%)

Query: 112 PGLQGPIGQKGEIGAKG------------------------------EMGVKGERGEKGA 141
           PGLQG  G+KGE G  G                              E+G  G+ G+ G 
Sbjct: 679 PGLQGQRGKKGEAGIPGINGLPGPPGSQGSPGVPGPPGPVGPPGLPGEIGFSGKPGQPGQ 738

Query: 142 PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
           PG  G  G  G+P   G +GPKG+ G  G  G+PG+ G RG  G+ G  G  G  G  GL
Sbjct: 739 PGSPGKDGTNGLP---GLQGPKGEPGERGEYGLPGNPGPRGEVGEQGLVGMPGEKGEMGL 795

Query: 202 PGEPGLDGIPGRNG 215
           PG PGL G+ G  G
Sbjct: 796 PGSPGLQGLRGEKG 809



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 3/71 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QGP G  GE   +GE G+ G+ G  G PG  G  G +G PG +G++G +G  G+PG 
Sbjct: 1332 PGFQGPRGPPGE---QGEKGIPGKEGASGKPGEQGVKGERGDPGVKGEKGAQGQKGHPGE 1388

Query: 172  QGIPGDEGKRG 182
             G+PG +G  G
Sbjct: 1389 PGLPGHKGHTG 1399



 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 76/194 (39%), Gaps = 61/194 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGER--------------------------GEKGAPGVV 145
            PGL GP G KG+ GA G  G  G R                          G  G PG  
Sbjct: 988  PGLPGPQGHKGDRGAPGLPGQPGSRGGPGIGIAGPPGSTGPPGEKGPPGSRGLPGFPGPQ 1047

Query: 146  GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD-------------------EGKRGPKGD 186
            GP G  G+PG+ G+RG  G  G P P   P D                    G  G KGD
Sbjct: 1048 GPAGQDGLPGNPGERGAPGKPG-PSPLLSPEDLNLLVKDVCNDCPPGPPGLPGLPGLKGD 1106

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G  G+ G DG DG  G+ GL G+P         G  GL       G  GT GE G  G 
Sbjct: 1107 KGLQGKPGRDGADGKKGDAGLKGLP---------GPPGL------TGPKGTKGEPGADGE 1151

Query: 247  RGNRGKSGINGVPG 260
             G +G+ G  GVPG
Sbjct: 1152 IGQKGEQGHPGVPG 1165



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     +   PG  G  G  G  G +G  G  GERGE G PG  GP G  G  G  G  
Sbjct: 728 GFSGKPGQPGQPGSPGKDGTNGLPGLQGPKGEPGERGEYGLPGNPGPRGEVGEQGLVGMP 787

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGD 186
           G KG+MG P   G PG +G RG KGD
Sbjct: 788 GEKGEMGLP---GSPGLQGLRGEKGD 810



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 25/35 (71%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV 145
            PPGL GP G KGE GA GE+G KGE+G  G PG +
Sbjct: 1133 PPGLTGPKGTKGEPGADGEIGQKGEQGHPGVPGFM 1167


>gi|403300298|ref|XP_003940884.1| PREDICTED: collagen alpha-2(V) chain [Saimiri boliviensis
           boliviensis]
          Length = 1499

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 326

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 387 GEAGPTGARGPEGPQGQRGET 407



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 88/219 (40%), Gaps = 72/219 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
            G  G+PG   K GP G +G PG  G  G  G+ GE G                      
Sbjct: 356 RGAHGMPG---KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412

Query: 207 -----------LDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
                       DG PG  G  G PG                          G PG  G+
Sbjct: 413 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 472

Query: 232 PGTNGTNGEKGMTGPR---------GNRGKSGINGVPGT 261
           PG  G  G KG  GP          G  GK G  G PGT
Sbjct: 473 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT 511



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGARGPEGPPGKPGEDGEPGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 272 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 332 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 392 TGARGPEGPQGQRG 405



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 210 IPGRNG 215
            PG +G
Sbjct: 946 DPGSHG 951



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 76/176 (43%), Gaps = 60/176 (34%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLD------------------GRDGL 201
            +G PGP+      G PG +G  G +GD G PG  GL                   G+ G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGGPGTPGPVGAPGDAGQRGE 1102

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  G  G PGR             GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRA------------GKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146


>gi|355565035|gb|EHH21524.1| hypothetical protein EGK_04614 [Macaca mulatta]
 gi|355750689|gb|EHH55016.1| hypothetical protein EGM_04141 [Macaca fascicularis]
          Length = 1499

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 92/170 (54%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G++G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQLGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 326

Query: 179 GK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
           G     GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GSMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 387 GEAGPTGARGPEGPQGQRGET 407



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 88/182 (48%), Gaps = 36/182 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G    KGE G  G+ G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGSMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP-- 226
            G  G+P   GK GP G +G PG  G  G  G+ GE G  G  G  G  G  G+ G P  
Sbjct: 356 RGAHGMP---GKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412

Query: 227 ----------GKDGIPGTNGTNGEKGM------------------TGPRGNRGKSGINGV 258
                     G DG PG  G  G  G                   TGP+G RG+ G  GV
Sbjct: 413 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQLGDPGV 472

Query: 259 PG 260
           PG
Sbjct: 473 PG 474



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGTRGPEGPPGKPGEDGEPGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 272 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGSMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 332 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 392 TGARGPEGPQGQRG 405



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 83/206 (40%), Gaps = 57/206 (27%)

Query: 113 GLQGPIGQ------KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKR 160
           GL+GP G+      KGE G  G MG  G  G +G PG  G  GPQG PG        GK 
Sbjct: 306 GLEGPKGEVGAPGSKGEAGPTGSMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKP 365

Query: 161 GPKGDMGYPGPQGIPGDE---------GKRGPKGDMGYPGRIGLD------------GRD 199
           GP G +G PG  G PG+          G RGP+G  G  G  G              G D
Sbjct: 366 GPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTD 425

Query: 200 GLPGEPGLDGIPG------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGE- 240
           G PG  G  G PG                    G  GI G+ G PG  G  G  G  GE 
Sbjct: 426 GTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQLGDPGVPGFKGEAGPKGEP 485

Query: 241 -----KGMTGPRGNRGKSGINGVPGT 261
                +G  GP G  GK G  G PGT
Sbjct: 486 GPHGIQGPIGPPGEEGKRGPRGDPGT 511



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 87/241 (36%), Gaps = 90/241 (37%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP    G+PG +G R   GP G  
Sbjct: 849  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 908

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 909  GFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 968

Query: 194  ------------------------------GLDGRDGLPGEPGLDGIPGRNGMDGI---- 219
                                          G  G  G+PG PG  G PG+ G  G     
Sbjct: 969  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 1028

Query: 220  -----------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                             PG +G  G DG PG +G  GE+G  G  G  G  G  G PGTP
Sbjct: 1029 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTP 1088

Query: 263  A 263
             
Sbjct: 1089 G 1089



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 81/198 (40%), Gaps = 63/198 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 886  PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 946  DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1005

Query: 228  KDGIPGTNGTNGEKGMTG 245
              G+PG  GT G+ G TG
Sbjct: 1006 MPGLPGPAGTPGKVGPTG 1023


>gi|32822777|gb|AAH55077.1| Collagen, type V, alpha 2 [Mus musculus]
          Length = 1497

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 470 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 520

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 521 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 580

Query: 210 IPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G  G PG+DG PG  G       PG+ G  G KG +G  G  G++G  GVPG
Sbjct: 581 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGVPGPKGSSGDLGKPGEAGNAGVPG 637



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 85/189 (44%), Gaps = 18/189 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP--- 154
            M+G    T    P G QG  G+ G  G  G  G+ G  G  G PG  GP G  G     
Sbjct: 382 GMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPP 441

Query: 155 ---------------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                          G +G RG  GD G PG +G  G +G+ GP G  G  G  G +G+ 
Sbjct: 442 GLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKR 501

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G  G+PG  G PG  G  G PG  G PG DG+PG  G  GE+G  G  G +G  G  G P
Sbjct: 502 GPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRP 561

Query: 260 GTPAICAYK 268
           G P +   +
Sbjct: 562 GEPGLPGAR 570



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 86/165 (52%), Gaps = 9/165 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGHKG---LEGPKGEIGAPGAKGEAGPTGPMGAMGPL 333

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G  G  G PG  G  GIPG +G  G PG  G  G  
Sbjct: 334 GPRGMPGERGRLGPQ---GAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPT 390

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G  G  G++G TGP G  G  G+ G  GT      K  + S 
Sbjct: 391 GARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSA 435



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 84/162 (51%), Gaps = 21/162 (12%)

Query: 128 GEMGVKGERGEKGAPGV---VGP---PGPQGI------PGDEGKRGPKGDMGYPGPQGIP 175
           G  G++G+ G+ G PG     GP   PGP GI      PG+EGKRGP+GD G  GP   P
Sbjct: 457 GPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 513

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 514 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 570

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL 274
           G  G  G+ GP G     G  G +G PG P     + +  S+
Sbjct: 571 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSM 612



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 265 GEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPT 324

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 325 GPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 384

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G  GP+G RG++G  G  G+
Sbjct: 385 GEAGPTGARGPEGPQGQRGETGPPGPAGS 413



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 75/161 (46%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  GA G  GP GP G  G  G R
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPR 336

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G+ G  GPQG PG  G  G  G  G  G +G+ G  G PG PG+ G  G  G  G  
Sbjct: 337 GMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPE 396

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G+ G PG  G+ G  G  G  G  G  G  G  GT
Sbjct: 397 GPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGT 437



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 987  TGQRGIVGMPGQRGERGMPGL---PGPAGAP---GKVGPTGATGDKGPPGPVGPPGSNGP 1040

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1041 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGE 1100

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1101 PGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1144



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 745 GPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 804

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 805 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 863

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G +G  G+ G RG +G  G  G PG+
Sbjct: 864 --PGQKGDAGSPGPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGS 911



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 91/189 (48%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 576 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGVPGPKGSSGDLGKPGEAGNAGV 635

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 636 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGV 695

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PGEPG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+GN G +G  G  G 
Sbjct: 696 PGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGP 755

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 756 PGLQGMPGE 764



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 100/238 (42%), Gaps = 69/238 (28%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP G   P G P
Sbjct: 532 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 591

Query: 155 GDEGKRGPKGD---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----- 200
           G++G+ GP G          MG PGP+G  GD GK G  G+ G PG+ G  G+DG     
Sbjct: 592 GEDGRPGPPGSIGIRGQPGSMGVPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPS 651

Query: 201 -------------------------------------------LPGEPGLDGIPGRNGMD 217
                                                      +PGEPG  G  G  G  
Sbjct: 652 GPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGER 711

Query: 218 GIPGK------DGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPAICA 266
           G PG+       GLPG+ G+ G +G +G KG  GP    G+ G  G+ G+PG   I  
Sbjct: 712 GNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAG 769



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 91/179 (50%), Gaps = 30/179 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 294 PGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGK 353

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGL------------------PGEPGL 207
            G  G+PG  G  GP    G  G+PG  G+ G  G                   PG  G 
Sbjct: 354 RGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGS 413

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G DG PG  G  G  G        G  G+ G +G TGP+G RG+SG  GVPG
Sbjct: 414 QGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPG 472



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 79/179 (44%), Gaps = 36/179 (20%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------EGKRGPKGDM 166
           GP G  GE G  G  G  G+RG  G PG  GP GP GIPG          +G+ GP G  
Sbjct: 334 GPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGAR 393

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG----------------------- 203
           G  GPQG  G+ G  GP G  G PG +G DG  G  G                       
Sbjct: 394 GPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQ 453

Query: 204 -EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  GI G++G  G+PG  G  G  G PG +G    +G  GP G  GK G  G PGT
Sbjct: 454 GSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGI---QGPIGPPGEEGKRGPRGDPGT 509



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 88/190 (46%), Gaps = 39/190 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 599 PPGSIGIRGQPGSMGVPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 658

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PG+ G     GP+G+ G PG  G
Sbjct: 659 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERG 718

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
             G  GLPGE G+ G  G +G  G PG  G  G  G PG  G  GE+G+    GP+G+RG
Sbjct: 719 EPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRG 778

Query: 252 KSGINGVPGT 261
             G  G  GT
Sbjct: 779 GIGEKGAEGT 788



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 699 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGL 758

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 759 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 818

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 819 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 865



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 82/187 (43%), Gaps = 48/187 (25%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKG---------DMGYP 169
           GE GA G +G +GERG   E+G PG+ G PG +G+ G  G  GPKG         D G P
Sbjct: 697 GEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPP 756

Query: 170 GPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDG-------------------------- 200
           G QG+PG+ G     GPKGD G  G  G +G  G                          
Sbjct: 757 GLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEP 816

Query: 201 ----LPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               L G PG  G PG  G +G  G  G     G DG PG  G  GE G  G  G+ G  
Sbjct: 817 GPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQ 876

Query: 254 GINGVPG 260
           G+ G PG
Sbjct: 877 GLAGSPG 883



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 70/148 (47%), Gaps = 27/148 (18%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           ++G  G PG VGP GP+G  G+ G+RG  G  G PG +G+ G  G  GPKG+ G  G IG
Sbjct: 692 DQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIG 751

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG--------------- 239
                   G PGL G+PG  G+ G PG  G  G  G  G  GT G               
Sbjct: 752 DT------GPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPG 805

Query: 240 ------EKGMTGPRGNRGKSGINGVPGT 261
                 EKG  GPRG  G  G  G PG+
Sbjct: 806 PAGPTGEKGEPGPRGLVGPPGSRGNPGS 833



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 82/205 (40%), Gaps = 48/205 (23%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 210 PGSVGPVGPRGPQGLQGQQGGVGPAGPPGEPGEPGPMGPIGSRGPEGPPGKPGEDGEPGR 269

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 270 NGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGA 329

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 330 MGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 389

Query: 244 TGPRGNRGKSGINGVPGTPAICAYK 268
           TG RG  G  G  G  G P     +
Sbjct: 390 TGARGPEGPQGQRGETGPPGPAGSQ 414



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 54/104 (51%), Gaps = 6/104 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 814 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 873

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           GPQG+    G  GP G  G PG  G  G  G PG  G  G  GR
Sbjct: 874 GPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGSAGR 914



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 65/140 (46%), Gaps = 39/140 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G  G  G  G +G +G+RG+         PGP G+PG +G        G PGP
Sbjct: 1044 PGPEGPAGNDGTPGRDGAVGERGDRGD---------PGPAGLPGSQGA------PGTPGP 1088

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PGD G+R                  G PG  G  G PGR       GK GLPG  G 
Sbjct: 1089 VGAPGDAGQR------------------GEPGSRGPVGPPGRA------GKRGLPGPQGP 1124

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G NG++G  G +G+RG
Sbjct: 1125 RGDKGDNGDRGDRGQKGHRG 1144



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 87/186 (46%), Gaps = 36/186 (19%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 824  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 883

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---------------------PGEPGLDG 209
            P G  G  G +G +G  G PG  G  G  G                       G PGL G
Sbjct: 884  PHGPHGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPAGEPGKEGPPGLRG 943

Query: 210  IPGRNGM---------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             PG +G                 G PG+DG PG DG PG  GT G++G+ G  G RG+ G
Sbjct: 944  DPGSHGRVGDRGPAGPPGSPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1003

Query: 255  INGVPG 260
            + G+PG
Sbjct: 1004 MPGLPG 1009



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  G+ G RGP G  G  G 
Sbjct: 1056 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGEPGSRGPVGPPGRAGK 1115

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1116 RGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1145


>gi|50511151|dbj|BAD32561.1| mKIAA1870 protein [Mus musculus]
          Length = 857

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 89/167 (53%), Gaps = 16/167 (9%)

Query: 133 KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           +G+RGE G PG  G  G QG+   PG +G+ G  G  G PGP+G  G+EG +G  G  G 
Sbjct: 351 RGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGP 410

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKGMTGP 246
            GR G  G  GLPG     G+ GR G +G  G DG+PG+DG P   G  G +G+ G  GP
Sbjct: 411 SGRRGTQGLQGLPGP---RGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGP 467

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
            G RG  G+ G+PG      +K ES   LP       L PP   G+E
Sbjct: 468 AGRRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 507



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 85/169 (50%), Gaps = 18/169 (10%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           +G KG  GA GE G+ G+ G KG  G +GPPG QG+ G  G+ G +GD G  GP G+ GD
Sbjct: 143 MGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGD 202

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            G  GP G+ G  G+ GL G DG PG PG+ G+PGR G  G  G+ G  G  G  G  G 
Sbjct: 203 RGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGY 262

Query: 238 NGE------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            GE                  +G  GP G  G+ G  G PG      +K
Sbjct: 263 LGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHK 311



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 95/200 (47%), Gaps = 17/200 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G  G  G  G  G KGE G KG PG  GP G +G  G +G  GP+G +G  GP
Sbjct: 375 PGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGP 434

Query: 172 Q------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +      GIPG +G+ G +GD G  G  G  G  G  G PG+ G+PG  G  G  G+ GL
Sbjct: 435 EGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGL 494

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI 285
           PG+ G PG  GT G  G+    GN+G+ G  G PG      +   +    P      +  
Sbjct: 495 PGQLGPPGKRGTEGGTGLP---GNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGF 551

Query: 286 --------PPTIVGSEHIFS 297
                   PP ++G E I  
Sbjct: 552 KGIQGPRGPPGLMGKEGIIG 571



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 80/149 (53%), Gaps = 12/149 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGD---EGKRGPKGD 165
           PG QG  G  G+ G  G  G +G  G  G PG  GPPG     G+PG     GKRG +G 
Sbjct: 450 PGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGG 509

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G PG QG PG +G+ G  G+MG+PG  GL G  G PG+ G  GI G        G  GL
Sbjct: 510 TGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPR------GPPGL 563

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            GK+GI G  G  G  G+ GP+G+RG  G
Sbjct: 564 MGKEGIIGPPGMLGPSGLPGPKGDRGSRG 592



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 89/189 (47%), Gaps = 39/189 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IPG 155
           P G  GP G KGE G KG+ G  G  G +G  G+ G PGP+G               IPG
Sbjct: 386 PRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPG 445

Query: 156 ---------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------G 194
                          D G  GP G  G PG  G+PG +G  G KG+ G PG++      G
Sbjct: 446 RDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRG 505

Query: 195 LDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            +G  GLP   GEPG  G PG +G  G PG  GL G  G PG  G  G +G  GP G  G
Sbjct: 506 TEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMG 565

Query: 252 KSGINGVPG 260
           K GI G PG
Sbjct: 566 KEGIIGPPG 574



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 94/255 (36%), Gaps = 82/255 (32%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G      ++ P G  G  G +G+ G  GE G KG+ G KG  G  GPPG  G+PG
Sbjct: 178 LIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPG 237

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKGDMGYPGRIG 194
            EGK G +G+ G  G +G  G +G                      RG  G  G PGR+G
Sbjct: 238 REGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMG 297

Query: 195 LDGRDGL----------------------------------------------------P 202
             G  GL                                                    P
Sbjct: 298 AQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEP 357

Query: 203 GEPG---------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G+PG         L G PG+ G  G PG  G PG  G  G  G  G+ G  GP G RG  
Sbjct: 358 GDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQ 417

Query: 254 GINGVPGTPAICAYK 268
           G+ G+PG   +   +
Sbjct: 418 GLQGLPGPRGVVGRQ 432



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 84/187 (44%), Gaps = 36/187 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
           GL G  G KG  G +G  G  GE+G KG  G VGP G  G PG +G  G +G  G  G  
Sbjct: 51  GLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFL 110

Query: 171 ----------PQGIPGDEG------------KRGPKGDMGYPGRIGLDGRDGL------- 201
                      +G+PG+ G            + GPKG  G  G  GL G  G+       
Sbjct: 111 GIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPL 170

Query: 202 --PGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             PGE GL    G PG  G  G  G DGL G  G PG +G +GEKG  G +G  G  G  
Sbjct: 171 GPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPP 230

Query: 257 GVPGTPA 263
           G+ G P 
Sbjct: 231 GITGVPG 237



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 70/158 (44%), Gaps = 39/158 (24%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG QG IGQ+GE G +G+                GP GP G+ GD G  GP G+ G  G
Sbjct: 172 PPGEQGLIGQRGEPGLEGDH---------------GPVGPDGLKGDRGDPGPDGEHGEKG 216

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG--------------- 215
            +G+ G++G  GP G  G PGR G  G+ G  G+ G  G  G  G               
Sbjct: 217 QEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPG 276

Query: 216 ------MDGIPGKDGLPGK---DGIPGTNGTNGEKGMT 244
                   G  G  G PG+    G PG  G NG KG+T
Sbjct: 277 TPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGIT 314



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 85/181 (46%), Gaps = 30/181 (16%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           ++G  G++G +G +G  G  GP G QG  G +G+ GP+G  G PG QG  G+ G  G KG
Sbjct: 49  SRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKG 108

Query: 186 DMGYPGRIGLDGRDGLPGEPGLD------------------------GIPGRNGMD---- 217
            +G PG  G  G  GLPGEPG                          G+PG +GM     
Sbjct: 109 FLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLG 168

Query: 218 --GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
             G PG+ GL G+ G PG  G +G  G  G +G+RG  G +G  G       K E  S  
Sbjct: 169 PLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPG 228

Query: 276 P 276
           P
Sbjct: 229 P 229



 Score = 45.8 bits (107), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 61/126 (48%), Gaps = 19/126 (15%)

Query: 81  HNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RG 137
             NP V     ++ P    +G      +  PPG +G  G  G  G +GE G KG+    G
Sbjct: 471 RGNPGVAGLPGAQGP-PGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSG 529

Query: 138 EKGAPGVVGPPGPQGIPGD------EGKRGPKGDMGYP---------GPQGIPGDEGKRG 182
           E G PGV G  GP+G PGD      +G RGP G MG           GP G+PG +G RG
Sbjct: 530 EMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRG 589

Query: 183 PKGDMG 188
            +GD+G
Sbjct: 590 SRGDLG 595



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 3/59 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGY 168
           GL GP G  G+IG KG  G +G  G  G  G++GPPG   P G+PG +G RG +GD+G 
Sbjct: 538 GLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDLGL 596


>gi|353231962|emb|CCD79317.1| putative collagen alpha-1(I) chain precursor [Schistosoma mansoni]
          Length = 1044

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 90/161 (55%), Gaps = 12/161 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGYP 169
           G QGP+G  G  GA G  G KG+RG  GA G  G  GP G PG  G   +RG +G++G+ 
Sbjct: 174 GPQGPVGNPGRPGASGPAGQKGDRGLTGAKGEKGEKGPTGTPGHPGLSKERGIQGEIGHD 233

Query: 170 GPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G+ G+ G+RGP+G MG           GR GL G  G  GEPG  G+ G  G+ G+ 
Sbjct: 234 GRPGVRGEPGQRGPEGSMGVAGRPGERGTMGRSGLQGPKGAQGEPGSVGVEGPTGIQGLK 293

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G+ G  G+ G  G  G  GE+G  GP G +G  G+ G+PG+
Sbjct: 294 GEKGQLGRPGERGETGPRGERGPIGPIGIKGVIGLIGIPGS 334



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 93/191 (48%), Gaps = 31/191 (16%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      +  P G  G  G+ GE G  G  G++G +G +G PG VG  GP GI   +G +
Sbjct: 237 GVRGEPGQRGPEGSMGVAGRPGERGTMGRSGLQGPKGAQGEPGSVGVEGPTGI---QGLK 293

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---------------DGRDGLPGEP 205
           G KG +G PG +G  G  G+RGP G +G  G IGL                G  GLPG+P
Sbjct: 294 GEKGQLGRPGERGETGPRGERGPIGPIGIKGVIGLIGIPGSNGETGVNGTVGDPGLPGQP 353

Query: 206 GLDGIPGRNGMDGIPGKDGLP----------GKDGIPGTNGTNGEKGMT---GPRGNRGK 252
           G DG PG  G  G+ G  GLP          G  G+PG  G  G  G T   GP+G+ G+
Sbjct: 354 GTDGRPGLRGQPGLRGPPGLPGVVKVQPSTIGGTGLPGDRGNPGSYGPTGEPGPKGSAGE 413

Query: 253 SGINGVPGTPA 263
            GI G PG P 
Sbjct: 414 RGITGDPGDPG 424



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 87/163 (53%), Gaps = 6/163 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL    G +GEIG  G  GV+GE   RG +G+ GV G PG +G  G  G +GPKG  G 
Sbjct: 218 PGLSKERGIQGEIGHDGRPGVRGEPGQRGPEGSMGVAGRPGERGTMGRSGLQGPKGAQGE 277

Query: 169 PGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           PG  G+ G    +G +G KG +G PG  G  G  G  G  G  GI G  G+ GIPG +G 
Sbjct: 278 PGSVGVEGPTGIQGLKGEKGQLGRPGERGETGPRGERGPIGPIGIKGVIGLIGIPGSNGE 337

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G +G  G  G  G+ G  G  G RG+ G+ G PG P +   +
Sbjct: 338 TGVNGTVGDPGLPGQPGTDGRPGLRGQPGLRGPPGLPGVVKVQ 380



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 72/140 (51%), Gaps = 3/140 (2%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           E G  G  GV+GP GP G PG  G  GP G  G    +G+ G +G++G KG  G PG  G
Sbjct: 163 ESGPTGRAGVMGPQGPVGNPGRPGASGPAGQKGD---RGLTGAKGEKGEKGPTGTPGHPG 219

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           L    G+ GE G DG PG  G  G  G +G  G  G PG  GT G  G+ GP+G +G+ G
Sbjct: 220 LSKERGIQGEIGHDGRPGVRGEPGQRGPEGSMGVAGRPGERGTMGRSGLQGPKGAQGEPG 279

Query: 255 INGVPGTPAICAYKRESCSL 274
             GV G   I   K E   L
Sbjct: 280 SVGVEGPTGIQGLKGEKGQL 299



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 30/169 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
           G +GP G  G  G   E G++GE G  G PGV G P         G+RGP+G MG    P
Sbjct: 207 GEKGPTGTPGHPGLSKERGIQGEIGHDGRPGVRGEP---------GQRGPEGSMGVAGRP 257

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRN------------ 214
           G +G  G  G +GPKG  G PG +G++G     GL GE G  G PG              
Sbjct: 258 GERGTMGRSGLQGPKGAQGEPGSVGVEGPTGIQGLKGEKGQLGRPGERGETGPRGERGPI 317

Query: 215 ---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G+ G+ G  G+PG +G  G NGT G+ G+ G  G  G+ G+ G PG
Sbjct: 318 GPIGIKGVIGLIGIPGSNGETGVNGTVGDPGLPGQPGTDGRPGLRGQPG 366



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 47/86 (54%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           QGP G  G  GA G  G +GE G++GAPG  G  G  G PG  G  G  G++G  GP G 
Sbjct: 474 QGPQGPSGNKGAMGMTGPRGETGQRGAPGPTGATGDVGEPGLTGPPGLNGNIGRKGPTGQ 533

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDG 200
            G  G RG +GD G PG+ G  G  G
Sbjct: 534 RGQPGVRGKQGDAGEPGKTGEAGPHG 559



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 9/61 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP G  G +G +G MG +G RG++G PG VGP GP   PG +G+ GP      PGP
Sbjct: 732 PGDQGPRGPSGPVGERGPMGARGSRGDRGDPGEVGPLGP---PGRDGELGP------PGP 782

Query: 172 Q 172
           Q
Sbjct: 783 Q 783



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 77/186 (41%), Gaps = 48/186 (25%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------------EGKRGPKG 164
           ++G+ G  G  G  G  G  G PGV G PGPQGI G                +G+ G KG
Sbjct: 61  ERGQAGPAGTPGTPGRDGRSGVPGVQGSPGPQGIVGPPGEPGGEGSPGPQGYQGQTGDKG 120

Query: 165 DMGYPGPQGIPGDEGKRGPK---------------------------GDMGYPGRIGLDG 197
           D G+    G  G +G  GP+                           G  G  G +G  G
Sbjct: 121 DTGF---DGHKGSQGPMGPQGPQGPTGPVGPPGPMGPPGPSGPRGESGPTGRAGVMGPQG 177

Query: 198 RDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G PG PG  G  G+    G+ G  G+ G  G  G PG  G + E+G+ G  G+ G+ G
Sbjct: 178 PVGNPGRPGASGPAGQKGDRGLTGAKGEKGEKGPTGTPGHPGLSKERGIQGEIGHDGRPG 237

Query: 255 INGVPG 260
           + G PG
Sbjct: 238 VRGEPG 243



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 77/195 (39%), Gaps = 55/195 (28%)

Query: 112 PGLQGPIGQKGEIGAK----GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           PGL+GP G  G +  +    G  G+ G+RG  G+ G  G PGP+G  G+ G  G  GD G
Sbjct: 365 PGLRGPPGLPGVVKVQPSTIGGTGLPGDRGNPGSYGPTGEPGPKGSAGERGITGDPGDPG 424

Query: 168 ------------------------------------------------YPGPQGIPGDEG 179
                                                             GPQG  G++G
Sbjct: 425 DRGLSGPPGPPGPDGQPGVDGEDGPDGSPGDDGPPGPPGPFGEPGPAGEQGPQGPSGNKG 484

Query: 180 K---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                GP+G+ G  G  G  G  G  GEPGL G PG NG  G  G  G  G+ G+ G  G
Sbjct: 485 AMGMTGPRGETGQRGAPGPTGATGDVGEPGLTGPPGLNGNIGRKGPTGQRGQPGVRGKQG 544

Query: 237 TNGEKGMTGPRGNRG 251
             GE G TG  G  G
Sbjct: 545 DAGEPGKTGEAGPHG 559



 Score = 40.4 bits (93), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 29/42 (69%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
           PPGL G IG+KG  G +G+ GV+G++G+ G PG  G  GP G
Sbjct: 518 PPGLNGNIGRKGPTGQRGQPGVRGKQGDAGEPGKTGEAGPHG 559



 Score = 40.0 bits (92), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 68/162 (41%), Gaps = 36/162 (22%)

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD---------------EGKRGPKGDM 187
           G  GP G  G PG +G+ G  G  G PGPQGI G                +G+ G KGD 
Sbjct: 63  GQAGPAGTPGTPGRDGRSGVPGVQGSPGPQGIVGPPGEPGGEGSPGPQGYQGQTGDKGDT 122

Query: 188 GYPGRIGLDGRDG---------------------LPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G+ G  G  G  G                       G  G  G  GR G+ G  G  G P
Sbjct: 123 GFDGHKGSQGPMGPQGPQGPTGPVGPPGPMGPPGPSGPRGESGPTGRAGVMGPQGPVGNP 182

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+ G  G  G  G++G+TG +G +G+ G  G PG P +   +
Sbjct: 183 GRPGASGPAGQKGDRGLTGAKGEKGEKGPTGTPGHPGLSKER 224



 Score = 39.3 bits (90), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 52/118 (44%), Gaps = 33/118 (27%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGI---------------------- 153
           G++G  GA G  G  G RG+ G PG+ G    PG QG                       
Sbjct: 667 GEQGLSGAPGSAGETGPRGDSGEPGIPGKDGRPGKQGEPGPKGAPGGKGPTGPPGPPGLD 726

Query: 154 -----PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
                PGD+G RGP G +G  GP G     G RG +GD G  G +G  GRDG  G PG
Sbjct: 727 GPVGYPGDQGPRGPSGPVGERGPMGA---RGSRGDRGDPGEVGPLGPPGRDGELGPPG 781


>gi|74138797|dbj|BAE27208.1| unnamed protein product [Mus musculus]
          Length = 1669

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 104/202 (51%), Gaps = 34/202 (16%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQG-- 152
            V   G   S  E   PG+ G    +G  G+ GE G KGE+G+ G PG+   G PG +G  
Sbjct: 1013 VGGMGLPGSPGEKGVPGIPG---SQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQ 1069

Query: 153  ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                 PG  G++G KG  G PG   +PG  G RG  G++G+PG  GL G  G  G PGLD
Sbjct: 1070 GLAGFPGSPGEKGEKGSAGTPG---MPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLD 1126

Query: 209  GIPGRNGMDGIPG---------KDGLPGKDGIPGTNGTNGEKGMT-----------GPRG 248
            G+PG  G  G+PG         + G PG DGIPG+ G  GE+G+            G +G
Sbjct: 1127 GVPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFPGFPGSKGDKG 1186

Query: 249  NRGKSGINGVPGTPAICAYKRE 270
            ++G+ G  G+ G+P I   K E
Sbjct: 1187 SKGEVGFPGLAGSPGIPGVKGE 1208



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 86/154 (55%), Gaps = 13/154 (8%)

Query: 119  GQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GQKG+ G KG++G    KG RG+ G PGV   PG  G  G  G+ GPKGD G  G  G P
Sbjct: 948  GQKGDQGEKGQIGPTGDKGSRGDPGTPGV---PGKDGQAGHPGQPGPKGDPGLSGTPGSP 1004

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            G  G +G  G MG PG  G  G  G+PG  G+ G PG  G  G  G+ GLPG  GIPG  
Sbjct: 1005 GLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGI-GIPGRP 1063

Query: 236  GTNGEKGMT------GPRGNRGKSGINGVPGTPA 263
            G  G++G+       G +G +G +G  G+PG+P 
Sbjct: 1064 GDKGDQGLAGFPGSPGEKGEKGSAGTPGMPGSPG 1097



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 91/164 (55%), Gaps = 18/164 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGY 168
            PG QG  G  G  G+KGEMGV G  G+ G+PG  G PG  G  GD G     GP+GD G+
Sbjct: 863  PGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGF 922

Query: 169  PGPQG---IPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G +G   +PG  G          +G KGD G  G+IG  G  G  G+PG  G+PG++G 
Sbjct: 923  KGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQ 982

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 983  AGHPGQ---PGPKGDPGLSGTPGSPGLPGPKGSVGGMGLPGSPG 1023



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GP G KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 960  GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGPKGSVGGMGLP 1019

Query: 167  ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
                     G PG QG+PG  G++G KG+        +G PGR G  G  GL G PG  G
Sbjct: 1020 GSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPG 1079

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G PG  G PG  G PG  G  G  G+ G +G++G  G++GVPG
Sbjct: 1080 EKGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLDGVPG 1130



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 75/137 (54%), Gaps = 16/137 (11%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD--MGYPGRIGLDGRDGL 201
           + GPPG  G+PG  G  GP+GD G+PG  G PG  G++G  G   +G+PG  G  G DGL
Sbjct: 644 LPGPPGAAGLPGSPGFPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGL 703

Query: 202 PGEPGLDGIPGRNGMDGIPGK--------------DGLPGKDGIPGTNGTNGEKGMTGPR 247
           PGE G  G PGR G +G+PG                GL G+ G+PG  GT GEKG  G  
Sbjct: 704 PGEIGRPGSPGRPGFNGLPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGP 763

Query: 248 GNRGKSGINGVPGTPAI 264
           G  G+ G+ G PG   I
Sbjct: 764 GVPGEQGLTGPPGLQGI 780



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 84/175 (48%), Gaps = 23/175 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------- 155
            PG  GP G  G  G KG+ G+ G  G +G PG  G  G  G+PG                
Sbjct: 890  PGSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQ 949

Query: 156  --DEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
              D+G++G   P GD G  G  G PG  GK G  G  G PG  G  G  G PG PGL G 
Sbjct: 950  KGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGP 1009

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN--GVPGTPA 263
             G  G  G+PG  G  G  GIPG+ G  G  G  G +G +G+SG+   G+PG P 
Sbjct: 1010 KGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPG 1064



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 72/148 (48%), Gaps = 24/148 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G KG++G +G PG+ G  G  G+PG +G          PG  G PG +G+ G  G  G P
Sbjct: 840 GPKGDKGSQGLPGLTGQSGLPGLPGQQG---------TPGVPGFPGSKGEMGVMGTPGQP 890

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT------------- 237
           G  G  G  GLPGE G  G+PG +G  G PG  G  G  G+PG  G+             
Sbjct: 891 GSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQK 950

Query: 238 --NGEKGMTGPRGNRGKSGINGVPGTPA 263
              GEKG  GP G++G  G  G PG P 
Sbjct: 951 GDQGEKGQIGPTGDKGSRGDPGTPGVPG 978



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 87/207 (42%), Gaps = 65/207 (31%)

Query: 112 PGLQGPIGQKGEIG-----AKGEMGVKG------ERGEKGAPGV------VGPPGPQGIP 154
           PG  GP GQKGE G      KG+ G+ G      E+G  G PGV       GPPG QGI 
Sbjct: 722 PGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGIR 781

Query: 155 GDEGKRGP-----------------------------------KGDMGYPGPQGIPGDEG 179
           GD G  G                                    KG+ G+P   G PG + 
Sbjct: 782 GDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFP---GFPGLD- 837

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------GRNGMDGIPGKDGLPGKDG 230
             GPKGD G  G  GL G+ GLPG PG  G P         G  G+ G PG+ G PG  G
Sbjct: 838 MPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAG 897

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  G  G+ G+ G  G RG  G  G
Sbjct: 898 TPGLPGEKGDHGLPGSSGPRGDPGFKG 924



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 82/195 (42%), Gaps = 50/195 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G  G KGE G+       G PG+ G PG  GIPG  G++G  G  G PG 
Sbjct: 716 PGFNGLPGNPGPQGQKGEPGI-------GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGE 768

Query: 172 QGIPGDEGKRGPKGDMGYPG--------------------------------RIGLDGRD 199
           QG+ G  G +G +GD G PG                                  G+ G  
Sbjct: 769 QGLTGPPGLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEK 828

Query: 200 GLPGEPGLD-----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           G PG PGLD           G+PG  G  G+PG  G  G  G+PG  G+ GE G+ G  G
Sbjct: 829 GFPGFPGLDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPG 888

Query: 249 NRGKSGINGVPGTPA 263
             G  G  G PG P 
Sbjct: 889 QPGSPGPAGTPGLPG 903



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 93/225 (41%), Gaps = 67/225 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--PGPQGIPGDEGKRGPKGDMGYP 169
           PG  GP G +G  G  G  G+ GE+G  G PG+  P  PGP+G+ G  G+ G  G  G P
Sbjct: 657 PGFPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGLPGEIGRPGSPGRP 716

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------IPGRNGMDGIP 220
           G  G+PG+ G +G KG+ G  G  GL G+ GLPG PG  G         +PG  G+ G P
Sbjct: 717 GFNGLPGNPGPQGQKGEPGI-GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPP 775

Query: 221 GKDGLPGKDGIPGTNGT--------------------------------NGEKG------ 242
           G  G+ G  G PG  G                                  GEKG      
Sbjct: 776 GLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFPGFPG 835

Query: 243 --MTGPRGNRGKSGI---------------NGVPGTPAICAYKRE 270
             M GP+G++G  G+                G PG P     K E
Sbjct: 836 LDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGE 880



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 75/157 (47%), Gaps = 38/157 (24%)

Query: 127 KGEMG--VKGERGEKGAPGVVGPPGPQGIPGDE-----------GKRGPKGDMGYPGPQG 173
           KG+MG   +G +G+KG  GV GPPG   +PG             G++G KG+ G+PG   
Sbjct: 217 KGQMGSSFQGPKGDKGEQGVSGPPG---VPGQAQVKEKGDFAPTGEKGQKGEPGFPG--- 270

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
           +PG        G+ G PG+ G  G+      PG DG  G  G  GIPG  G PG  G  G
Sbjct: 271 VPG-------YGEKGEPGKQGPRGK------PGKDGEKGERGSPGIPGDSGYPGLPGRQG 317

Query: 234 TNGTNGEKGMTGPRGN------RGKSGINGVPGTPAI 264
             G  GE G+ GP G        G+ G  G PG P +
Sbjct: 318 PQGEKGEAGLPGPPGTVIGTMPLGEKGDRGYPGAPGL 354



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 50/82 (60%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G+ G +G+ G  GE+GE+G+PG+ G  G  G+PG +G +G KG+ G PGP G     
Sbjct: 278 GEPGKQGPRGKPGKDGEKGERGSPGIPGDSGYPGLPGRQGPQGEKGEAGLPGPPGTVIGT 337

Query: 179 GKRGPKGDMGYPGRIGLDGRDG 200
              G KGD GYPG  GL G  G
Sbjct: 338 MPLGEKGDRGYPGAPGLRGEPG 359



 Score = 45.8 bits (107), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 60/123 (48%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           EIG  G+ G KG+RG               +PG +G  G       PGPQG PG  G+ G
Sbjct: 487 EIGFPGQPGAKGDRG---------------LPGRDGLEG------LPGPQGSPGLIGQPG 525

Query: 183 PKGDMGYPGRIGLD----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            KG+   PG I  D    G  G PG PG  G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 526 AKGE---PGEIFFDMRLKGDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGLK 582

Query: 239 GEK 241
           GE+
Sbjct: 583 GER 585



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 85/196 (43%), Gaps = 69/196 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG  GP GQKGE G+ G  G  GE+GE+G PG   P    G PG +G +G KG++G+PG 
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFP----GFPGSKGDKGSKGEVGFPGL 1196

Query: 171  --PQGIPGDEGKRG-----------------------PKGDMGYP--------------- 190
                GIPG +G++G                       PKGD G                 
Sbjct: 1197 AGSPGIPGVKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPP 1256

Query: 191  ------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                  G  G  G  G PG PG            +PG  G PG  G+PG  G+    G+T
Sbjct: 1257 GFPGINGPKGDKGNQGWPGAPG------------VPGPKGDPGFQGMPGIGGS---PGIT 1301

Query: 245  GPRGNRGKSGINGVPG 260
               G++G  G+ GVPG
Sbjct: 1302 ---GSKGDMGLPGVPG 1314


>gi|351699389|gb|EHB02308.1| Collagen alpha-2(IV) chain, partial [Heterocephalus glaber]
          Length = 1705

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/152 (46%), Positives = 82/152 (53%), Gaps = 9/152 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGD 165
           PG+ GP GQ G  G  G  G+ G  G+ G PG  GP GP G+PG  G       RG  GD
Sbjct: 807 PGMPGPKGQLGFPGPSGLPGLPGRAGQHGFPGAPGPEGPLGLPGVSGSEGLPGDRGDPGD 866

Query: 166 MGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            G PGP   +G+ GD G  G  GD G PG  G  G DG+PG PGL G  G  GM G  G 
Sbjct: 867 TGTPGPVGMKGLAGDRGDTGLVGDQGRPGDPGFKGMDGMPGIPGLKGDRGSPGMQGFQGM 926

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            GL G+ G PGT G  G  G+ GP+G  G+ G
Sbjct: 927 IGLRGQPGTPGTKGQAGFFGLPGPKGPAGQRG 958



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/201 (42%), Positives = 96/201 (47%), Gaps = 28/201 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+G  G  G  G KG  G +G  GE G PG+ G  GPQG PG +G+ G  G  G  GP
Sbjct: 1096 PGLKGERGIAGTPGLKGFFGERGAHGEVGFPGITGLAGPQGQPGLKGQTGFPGLTGLQGP 1155

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-----GLP 226
            QG PG  G  G KG  G+PG  GL G  GL G  GL G+PG  G  G PG D     G P
Sbjct: 1156 QGDPGQIGFPGEKGADGWPGVPGLPGFPGLRGISGLHGLPGPKGFTGSPGADMPGDPGFP 1215

Query: 227  GKDG----------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            G  G           PG+ G  G+KG  G  G RG +G  G+ G P I           P
Sbjct: 1216 GPSGDRGDPGEPNTFPGSTGAPGQKGEQGAPGERGPAGRPGMQGFPGIS----------P 1265

Query: 277  NSETSQLLIPPTIVGSEHIFS 297
             S  S L   P  VGS  IF 
Sbjct: 1266 PSNISGL---PGDVGSPGIFG 1283



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 95/193 (49%), Gaps = 35/193 (18%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IPG 155
           PPGL+G  G  G  G  G  G  G RG KGA G+ GP G QG               IPG
Sbjct: 708 PPGLKGFPGDPGREGFPGPPGFMGPRGSKGAVGLPGPDGLQGTSGLPGPAGPPGDRGIPG 767

Query: 156 D--EGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           +    + GP+GD G   +PG +G+PG++G  G +G  G PG  G  G+ G PG  GL G+
Sbjct: 768 EVLGAQPGPRGDTGLPGHPGRKGLPGEQGAPGFRGSQGMPGMPGPKGQLGFPGPSGLPGL 827

Query: 211 PGRNGMDGIPG---------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           PGR G  G PG                +GLPG  G PG  GT G  GM G  G+RG +G+
Sbjct: 828 PGRAGQHGFPGAPGPEGPLGLPGVSGSEGLPGDRGDPGDTGTPGPVGMKGLAGDRGDTGL 887

Query: 256 NGVPGTPAICAYK 268
            G  G P    +K
Sbjct: 888 VGDQGRPGDPGFK 900



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 8/163 (4%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           + G +G+ G+ G  G KG PG  G PG +G  G  G  GPKG +G+PGP G+PG  G+  
Sbjct: 773 QPGPRGDTGLPGHPGRKGLPGEQGAPGFRGSQGMPGMPGPKGQLGFPGPSGLPGLPGR-- 830

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             G  G+PG  G +G  GLPG  G +G+PG     G PG  G PG  G+ G  G  G+ G
Sbjct: 831 -AGQHGFPGAPGPEGPLGLPGVSGSEGLPGDR---GDPGDTGTPGPVGMKGLAGDRGDTG 886

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI 285
           + G +G  G  G  G+ G P I   K +  S  P  +  Q +I
Sbjct: 887 LVGDQGRPGDPGFKGMDGMPGIPGLKGDRGS--PGMQGFQGMI 927



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 91/182 (50%), Gaps = 12/182 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  GQKGE GA GE G  G  G +G PG+  P    G+PGD G  G  G  GY GP
Sbjct: 1231 PGSTGAPGQKGEQGAPGERGPAGRPGMQGFPGISPPSNISGLPGDVGSPGIFGLKGYQGP 1290

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG PG    +G KGD G  G  G+ G  G  G+ G  G PG  G+ G  G  G PG  G 
Sbjct: 1291 QGPPGPAALQGSKGDAGSGGAPGVVGTKGWIGDQGPQGRPGVFGVPGEKGPRGEPGLMGS 1350

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVG 291
             G+ G  G++G  GP+G++G  G  G+ G+P I    +            ++  PP  +G
Sbjct: 1351 TGSTGAVGDRGPKGPKGDQGFPGAPGLVGSPGIAGIPQ------------RITAPPGAMG 1398

Query: 292  SE 293
             E
Sbjct: 1399 PE 1400



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/167 (44%), Positives = 85/167 (50%), Gaps = 23/167 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GLQGP G  G+IG  GE   KG  G  G PG+ G PG +GI G  G  GPKG  G PG  
Sbjct: 1151 GLQGPQGDPGQIGFPGE---KGADGWPGVPGLPGFPGLRGISGLHGLPGPKGFTGSPGAD 1207

Query: 173  GIPGDEGKRGPKGDMG-------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---- 221
             +PGD G  GP GD G       +PG  G  G+ G  G PG  G  GR GM G PG    
Sbjct: 1208 -MPGDPGFPGPSGDRGDPGEPNTFPGSTGAPGQKGEQGAPGERGPAGRPGMQGFPGISPP 1266

Query: 222  --KDGLPGKDGIPGTNGTNGEKGMTGP------RGNRGKSGINGVPG 260
                GLPG  G PG  G  G +G  GP      +G++G +G  G PG
Sbjct: 1267 SNISGLPGDVGSPGIFGLKGYQGPQGPPGPAALQGSKGDAGSGGAPG 1313



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 110/243 (45%), Gaps = 40/243 (16%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQG 152
            +  ++G+        P  LQG  G  G  GA G +G KG   ++G +G PGV G      
Sbjct: 1281 IFGLKGYQGPQGPPGPAALQGSKGDAGSGGAPGVVGTKGWIGDQGPQGRPGVFG------ 1334

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------- 205
            +PG++G RG  G MG  G  G  GD G +GPKGD G+PG  GL G  G+ G P       
Sbjct: 1335 VPGEKGPRGEPGLMGSTGSTGAVGDRGPKGPKGDQGFPGAPGLVGSPGIAGIPQRITAPP 1394

Query: 206  ------GLDGIPGRNG------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                  G  G PG  G              G+PGK G  G+ G+    G  G+ G  G +
Sbjct: 1395 GAMGPEGRRGRPGAQGEMGPQGPPGDPGFRGVPGKPGPQGRGGVSALPGFRGDPGAVGHQ 1454

Query: 248  GNRGKSGINGVPGTPAICAYKRESCS----LLPNSETSQLLIPPTIVGSEHIFSSSPIVV 303
            G  G+ G  G PG+P +      S S    L+ +S+  Q  + P  VG   ++S   ++ 
Sbjct: 1455 GPIGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQADQEPMCP--VGMNKLWSGYSLLY 1512

Query: 304  REG 306
             EG
Sbjct: 1513 FEG 1515



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 89/173 (51%), Gaps = 14/173 (8%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG----VKGERGEKGAPGVVGPPGPQ 151
            ++   GF  S  +   PG  G  G  G  G  G++G    + G  G KG  G+ G PG +
Sbjct: 1052 VIGFPGFTGSRGDKGAPGSSGLYGDDGLTGDFGDIGDTIDLPGSPGLKGERGIAGTPGLK 1111

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
            G     G+RG  G++G+PG  G+ G +G+ G KG  G+PG  GL G     G+PG  G P
Sbjct: 1112 GF---FGERGAHGEVGFPGITGLAGPQGQPGLKGQTGFPGLTGLQGPQ---GDPGQIGFP 1165

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G DG PG  GLP   G PG  G +G  G+ GP+G  G  G + +PG P  
Sbjct: 1166 GEKGADGWPGVPGLP---GFPGLRGISGLHGLPGPKGFTGSPGAD-MPGDPGF 1214



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 93/192 (48%), Gaps = 29/192 (15%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEI-GAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            L  +QG      +   PGL G   + G I G KG++GV G  G  G PGV GPPG  G P
Sbjct: 1000 LKGLQGMPGVPGQAGVPGLPG---RPGHIKGIKGDIGVPGSPGLPGFPGVTGPPGVIGFP 1056

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG----YPGRIGLDGRDGLPGEPGLDGI 210
            G  G RG   D G PG  G+ GD+G  G  GD+G     PG  GL G  G+ G PGL G 
Sbjct: 1057 GFTGSRG---DKGAPGSSGLYGDDGLTGDFGDIGDTIDLPGSPGLKGERGIAGTPGLKGF 1113

Query: 211  PGRNGMDG---IPGKDGLPGKDGIPGTNGTNGEKGMTG---PRGNRGK------------ 252
             G  G  G    PG  GL G  G PG  G  G  G+TG   P+G+ G+            
Sbjct: 1114 FGERGAHGEVGFPGITGLAGPQGQPGLKGQTGFPGLTGLQGPQGDPGQIGFPGEKGADGW 1173

Query: 253  SGINGVPGTPAI 264
             G+ G+PG P +
Sbjct: 1174 PGVPGLPGFPGL 1185



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 78/173 (45%), Gaps = 39/173 (22%)

Query: 143 GVVGPPGPQGIPGD---EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           GV GPPG +G PGD   EG  GP G M            G RG KG +G PG  GL G  
Sbjct: 704 GVDGPPGLKGFPGDPGREGFPGPPGFM------------GPRGSKGAVGLPGPDGLQGTS 751

Query: 200 ------------GLPGE-----PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                       G+PGE     PG     G  G+ G PG+ GLPG+ G PG  G+ G  G
Sbjct: 752 GLPGPAGPPGDRGIPGEVLGAQPGPR---GDTGLPGHPGRKGLPGEQGAPGFRGSQGMPG 808

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHI 295
           M GP+G  G  G +G+PG P      +      P  E    L  P + GSE +
Sbjct: 809 MPGPKGQLGFPGPSGLPGLPGRAG--QHGFPGAPGPEGPLGL--PGVSGSEGL 857



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 91/201 (45%), Gaps = 39/201 (19%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI--- 153
            V M+G      +    G QG  G  G  G  G  G+ G +G++G+PG+ G  G  G+   
Sbjct: 873  VGMKGLAGDRGDTGLVGDQGRPGDPGFKGMDGMPGIPGLKGDRGSPGMQGFQGMIGLRGQ 932

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGD--------------------------EGKRGPKGDM 187
            PG  G +G  G  G PGP+G  G                           +G++G +G M
Sbjct: 933  PGTPGTKGQAGFFGLPGPKGPAGQRGGKGNRGEPGPPGPPPAIMPGMKFIKGEKGDEGPM 992

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------GIPGKDGLPGKDGIPGTNGT 237
            G  G +GL G  G+PG PG  G+PG  G            G+PG  GLPG  G+ G  G 
Sbjct: 993  GLKGHLGLKGLQGMPGVPGQAGVPGLPGRPGHIKGIKGDIGVPGSPGLPGFPGVTGPPGV 1052

Query: 238  NGEKGMTGPRGNRGKSGINGV 258
             G  G TG RG++G  G +G+
Sbjct: 1053 IGFPGFTGSRGDKGAPGSSGL 1073



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 58/124 (46%), Gaps = 18/124 (14%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG  G PGP G+PG     GP G  G+PG   L GR G  GE G  G PG  G  G  G 
Sbjct: 47  KGGRGLPGPAGLPG---FHGPPGLQGFPG---LQGRKGDKGERGAPGTPGPKGDVGPRGV 100

Query: 223 DGLPGKDGIPGT------------NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G PG +GIPG             +G NG +G TGP+G  G  G  G  G P     K E
Sbjct: 101 SGFPGANGIPGYPGQGGPRGRPGYDGCNGTRGDTGPQGPSGSEGFPGTFGPPGPKGQKGE 160

Query: 271 SCSL 274
             +L
Sbjct: 161 PYAL 164



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 69/132 (52%), Gaps = 19/132 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG-------------VVGPPGPQGIPGDEGK 159
           GL+G  G +G  G  G  GV G++G KG PG             + G PG +G PG  GK
Sbjct: 444 GLKGAQGSRGYAGLPGTPGVNGQKGRKGDPGNCKCAESDQFPGGLPGLPGLKGFPGANGK 503

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG------RDGLPGEPGLDGIPGR 213
            G KG+ G PG  GIPG  G +G  G +G PG  G  G        G  G+PG+ G+ G 
Sbjct: 504 PGWKGEPGDPGQHGIPGFPGFKGAPGSIGAPGPKGAKGDSRTVTTKGERGQPGIPGVHGM 563

Query: 214 NGMDGIPGKDGL 225
            G DGIPG+DGL
Sbjct: 564 KGDDGIPGRDGL 575



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/117 (45%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G +G  G  G PG  GPPG QG PG +G++G KG+ G P   G PG +G  GP+G  G
Sbjct: 46  EKGGRGLPGPAGLPGFHGPPGLQGFPGLQGRKGDKGERGAP---GTPGPKGDVGPRGVSG 102

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           +PG  G+ G  G  G  G  G  G NG  G  G  G  G +G PGT G  G KG  G
Sbjct: 103 FPGANGIPGYPGQGGPRGRPGYDGCNGTRGDTGPQGPSGSEGFPGTFGPPGPKGQKG 159



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 85/193 (44%), Gaps = 32/193 (16%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G      ++  PG  GP G  G  G  G  G+ G+RG+ G  G  GP G +G+ GD 
Sbjct: 823  GLPGLPGRAGQHGFPGAPGPEGPLGLPGVSGSEGLPGDRGDPGDTGTPGPVGMKGLAGDR 882

Query: 158  GKRGPKGDMGYPGPQG---------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  G  GD G PG  G         IPG +G RG  G  G+ G IGL G+      PG  
Sbjct: 883  GDTGLVGDQGRPGDPGFKGMDGMPGIPGLKGDRGSPGMQGFQGMIGLRGQ------PGTP 936

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGT-----------------NGEKGMTGPRGNRG 251
            G  G+ G  G+PG  G  G+ G  G  G                   GEKG  GP G +G
Sbjct: 937  GTKGQAGFFGLPGPKGPAGQRGGKGNRGEPGPPGPPPAIMPGMKFIKGEKGDEGPMGLKG 996

Query: 252  KSGINGVPGTPAI 264
              G+ G+ G P +
Sbjct: 997  HLGLKGLQGMPGV 1009



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 47/84 (55%), Gaps = 6/84 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G KGE G  G+ G+ G  G KGAPG +G PGP+G  GD      KG+ G P  
Sbjct: 498 PGANGKPGWKGEPGDPGQHGIPGFPGFKGAPGSIGAPGPKGAKGDSRTVTTKGERGQP-- 555

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGL 195
            GIPG  G    KGD G PGR GL
Sbjct: 556 -GIPGVHGM---KGDDGIPGRDGL 575



 Score = 42.7 bits (99), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 19/102 (18%)

Query: 158 GKRGPKGDMGYPGPQGIPGD------------------EGKRGPKGDMGYPGRIGLDGRD 199
           G++G KGD G PGP GIP D                  +G++G +G+ G+ G I   G +
Sbjct: 227 GEKGEKGDQGQPGPNGIPSDTTHPIVAPTGSTIHPDMYKGEKGSQGEPGFKG-ISYKGEE 285

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G+ G PG  G PG +G  G PG+ G  G+DG  G +G  G K
Sbjct: 286 GIMGFPGTRGPPGLDGERGFPGQKGSKGRDGYQGPDGPQGSK 327



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 57/138 (41%), Gaps = 51/138 (36%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G +G  G +G    KG++GE+GAPG  GP         +G  GP+G  G+PG 
Sbjct: 59  PGFHGPPGLQGFPGLQGR---KGDKGERGAPGTPGP---------KGDVGPRGVSGFPGA 106

Query: 172 QGIPG---------------------DEGKRGPKGDMGYPGRIGLDGRDGL--------- 201
            GIPG                     D G +GP G  G+PG  G  G  G          
Sbjct: 107 NGIPGYPGQGGPRGRPGYDGCNGTRGDTGPQGPSGSEGFPGTFGPPGPKGQKGEPYALSR 166

Query: 202 ---------PGEPGLDGI 210
                    PGEPGL G 
Sbjct: 167 EDQDRYRGEPGEPGLVGF 184


>gi|348530964|ref|XP_003452980.1| PREDICTED: collagen alpha-1(IV) chain-like [Oreochromis niloticus]
          Length = 1702

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 90/173 (52%), Gaps = 12/173 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------P 162
            PG  GP G KG++G  G  G +G  GEKG  G+ G PG  GIPG  G++G         P
Sbjct: 1052 PGPSGPKGVKGDLGTPGHPGFRGTDGEKGETGLPGEPG-IGIPGFPGQKGQTGEPGFQGP 1110

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             GD G  G +G+PG  G  GPKGD G  G  G  GR G  G PGL G  G  G DG PG+
Sbjct: 1111 AGDKGQKGQEGMPGKPGLPGPKGDQGSSGYQGQPGRPGDKGTPGLPGFVGEPGQDGRPGE 1170

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV--PGTPAICAYKRESCS 273
             GL G  G  G  G +G  G+ G  G RG+ G+ G+  PG P     K +  S
Sbjct: 1171 TGLQGPSGPKGDKGDSGRDGIPGSTGERGQPGMAGIGFPGPPGELGSKGDKGS 1223



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 101/207 (48%), Gaps = 37/207 (17%)

Query: 95   PLVAMQGFCNSTKEYCPPGLQGPI---GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
            P + + GF     +   PG QGP    GQKG+ G  G+ G+ G +G++G+ G  G P   
Sbjct: 1088 PGIGIPGFPGQKGQTGEPGFQGPAGDKGQKGQEGMPGKPGLPGPKGDQGSSGYQGQP--- 1144

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G PGD+G  G  G +G PG  G PG+   +G  GPKGD G  GR G+ G  G  G+PG+ 
Sbjct: 1145 GRPGDKGTPGLPGFVGEPGQDGRPGETGLQGPSGPKGDKGDSGRDGIPGSTGERGQPGMA 1204

Query: 209  GI-----PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG--------------------M 243
            GI     PG  G  G  G  G PG  GIPG  G  G+KG                    +
Sbjct: 1205 GIGFPGPPGELGSKGDKGSPGFPGNPGIPGVPGVKGDKGFPGPQGPQGQPGEQGPSGFSL 1264

Query: 244  TGPRGNRGKSGI---NGVPGTPAICAY 267
             GP+G+RG +G     G+PG P    +
Sbjct: 1265 EGPKGDRGGTGQPGEAGIPGQPGPAGF 1291



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 92/205 (44%), Gaps = 52/205 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGY 168
            PGL GP G +G  G +G+ G  G++G  G PG VG PG  G PG+   +G  GPKGD G 
Sbjct: 1126 PGLPGPKGDQGSSGYQGQPGRPGDKGTPGLPGFVGEPGQDGRPGETGLQGPSGPKGDKGD 1185

Query: 169  PGPQGIPGDEGKRGPKG--DMGYPG------RIGLDGRDGLPGEPGLDGIPG-------- 212
             G  GIPG  G+RG  G   +G+PG        G  G  G PG PG+ G+PG        
Sbjct: 1186 SGRDGIPGSTGERGQPGMAGIGFPGPPGELGSKGDKGSPGFPGNPGIPGVPGVKGDKGFP 1245

Query: 213  ---------------------------------RNGMDGIPGKDGLPGKDGIPGTNGTNG 239
                                               G+ G PG  G PG+DG  G  G  G
Sbjct: 1246 GPQGPQGQPGEQGPSGFSLEGPKGDRGGTGQPGEAGIPGQPGPAGFPGRDGQKGEKGDQG 1305

Query: 240  EKGMTGPRGNRGKSGINGVPGTPAI 264
             +G  G  G +G SG+ G+PG P +
Sbjct: 1306 LQGFQGESGIKGDSGLPGLPGAPGL 1330



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 81/157 (51%), Gaps = 22/157 (14%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMG 167
            P G  G  GQKGE G +G  G +GE G KG  G+ G PG  G+PG +G +G    +G  G
Sbjct: 1288 PAGFPGRDGQKGEKGDQGLQGFQGESGIKGDSGLPGLPGAPGLPGLDGPKGEVGLQGVTG 1347

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGR-------------------IGLDGRDGLPGEPGLD 208
            +PG +G  GD G RG  GD G+PG                    IG  G  GLPG  G  
Sbjct: 1348 FPGQKGEAGDLGYRGEAGDRGFPGEKGNEGPPGPPGPQMFIKGDIGFPGNQGLPGPQGPS 1407

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G+PG+ G  G+ G  G  G++G PG NG NG KG  G
Sbjct: 1408 GLPGQKGDRGVTGFPGPKGEEGFPGYNGQNGVKGEPG 1444



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 89/191 (46%), Gaps = 43/191 (22%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG+QGP G   ++  +   GVKG++G+ G PG  G  G  G+PGD G  G  G+ G PG 
Sbjct: 962  PGVQGPPGNMSDVDMEHMKGVKGDKGDIGTPGTSGERGIPGLPGDPGMPGKDGEPGLPGK 1021

Query: 171  --------------------------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                                        G+PG  G +G KGD+G PG  G  G DG  GE
Sbjct: 1022 PGDKGDSGEPGEPGGMGPPGPKGGTGEMGVPGPSGPKGVKGDLGTPGHPGFRGTDGEKGE 1081

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------------GMTGPRGNRGK 252
             GL G PG     GIPG  G  G+ G PG  G  G+K            G+ GP+G++G 
Sbjct: 1082 TGLPGEPGI----GIPGFPGQKGQTGEPGFQGPAGDKGQKGQEGMPGKPGLPGPKGDQGS 1137

Query: 253  SGINGVPGTPA 263
            SG  G PG P 
Sbjct: 1138 SGYQGQPGRPG 1148



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 95/207 (45%), Gaps = 55/207 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------------GI 153
            PGL GP   +G+IG   E G+KG+RGE   PGV GPPG                    G 
Sbjct: 941  PGLTGP---RGDIG---EPGLKGDRGE---PGVQGPPGNMSDVDMEHMKGVKGDKGDIGT 991

Query: 154  PGDEGKRG-PK--GDMGYPGPQGIPGDEGKRGPKGD---------------------MGY 189
            PG  G+RG P   GD G PG  G PG  GK G KGD                     MG 
Sbjct: 992  PGTSGERGIPGLPGDPGMPGKDGEPGLPGKPGDKGDSGEPGEPGGMGPPGPKGGTGEMGV 1051

Query: 190  PGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            PG     G+ G  G PG PG  G  G  G  G+PG+ G+ G  G PG  G  GE G  GP
Sbjct: 1052 PGPSGPKGVKGDLGTPGHPGFRGTDGEKGETGLPGEPGI-GIPGFPGQKGQTGEPGFQGP 1110

Query: 247  RGNRGKSGINGVPGTPAICAYKRESCS 273
             G++G+ G  G+PG P +   K +  S
Sbjct: 1111 AGDKGQKGQEGMPGKPGLPGPKGDQGS 1137



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 89/192 (46%), Gaps = 42/192 (21%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG-- 158
            G   ST E   PG+ G     G  G  GE+G KG++G  G PG  G PG  G+ GD+G  
Sbjct: 1190 GIPGSTGERGQPGMAG----IGFPGPPGELGSKGDKGSPGFPGNPGIPGVPGVKGDKGFP 1245

Query: 159  ------------------KRGPKGDMG------------YPGPQGIPGDEGKRGPKGD-- 186
                                GPKGD G             PGP G PG +G++G KGD  
Sbjct: 1246 GPQGPQGQPGEQGPSGFSLEGPKGDRGGTGQPGEAGIPGQPGPAGFPGRDGQKGEKGDQG 1305

Query: 187  -MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              G+ G  G+ G  GLPG PG  G+P   G+DG  G+ GL G  G PG  G  G+ G  G
Sbjct: 1306 LQGFQGESGIKGDSGLPGLPGAPGLP---GLDGPKGEVGLQGVTGFPGQKGEAGDLGYRG 1362

Query: 246  PRGNRGKSGING 257
              G+RG  G  G
Sbjct: 1363 EAGDRGFPGEKG 1374



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 69/139 (49%), Gaps = 30/139 (21%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI----------GLDGRDGLPGE 204
           G +G++G  G  G PG  G  G+ G RG  G +G PG I          GL GR+GLPG+
Sbjct: 528 GGKGQKGISGQPGQPGRPGAQGNPGLRGAPGAVGEPGDIFVAPGLKGDKGLPGRNGLPGQ 587

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN--------------------GEKGMT 244
           PG DGIPGR+G  G PG  G P ++GI G  G +                    G  G T
Sbjct: 588 PGQDGIPGRDGPPGFPGLKGEPAREGIKGERGPDGDPGPIGPPGERGPPGLPGFGRPGQT 647

Query: 245 GPRGNRGKSGINGVPGTPA 263
           G +G++G  G+ G PG P 
Sbjct: 648 GDKGSQGNPGVPGYPGRPG 666



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 89/181 (49%), Gaps = 35/181 (19%)

Query: 119 GQKGEIGAKGEMGVKG---ERGEKGAPGV-VGPPGPQGIPG---DEGKRGPKGDMGYPGP 171
           GQ G+ G++G  GV G     GEKG PG+ V  PGPQG PG   + G+ GPKGD G PG 
Sbjct: 645 GQTGDKGSQGNPGVPGYPGRPGEKGEPGIGVSTPGPQGAPGPRGEPGREGPKGDNGLPGD 704

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGL--DGRDGLPGEPGLDGIPGRNGMD------------ 217
            G+PG  G++G +G  G          G  G+PG PGL G PGR+G D            
Sbjct: 705 DGLPGFPGEKGEQGPPGIGFPGPTGPKGSSGIPGAPGLPGEPGRSGKDGGPGSPGPRGPK 764

Query: 218 -----GIPGKDGLPGKDGIPGTNGTN---------GEKGMTGPRGNRGKSGINGVPGTPA 263
                G+PG  G  G  GIPG  G           G +G TGP G +G  G  G PG P 
Sbjct: 765 GEPGRGLPGPKGSQGHQGIPGFQGEKGNIGLPGVPGREGHTGPPGPQGLKGDLGPPGLPG 824

Query: 264 I 264
           +
Sbjct: 825 L 825



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/124 (42%), Positives = 69/124 (55%), Gaps = 16/124 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PGL G  G KGE+G +G  G  G++GE G  G  G  G +G PG++G  GP         
Sbjct: 1328 PGLPGLDGPKGEVGLQGVTGFPGQKGEAGDLGYRGEAGDRGFPGEKGNEGPPGPPGPQMF 1387

Query: 163  -KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             KGD+G+PG QG+PG      P+G  G PG+ G  G  G PG  G +G PG NG +G+ G
Sbjct: 1388 IKGDIGFPGNQGLPG------PQGPSGLPGQKGDRGVTGFPGPKGEEGFPGYNGQNGVKG 1441

Query: 222  KDGL 225
            + G 
Sbjct: 1442 EPGF 1445



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 81/198 (40%), Gaps = 70/198 (35%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP-------KGDMGYPGPQGIPG 176
           +G KG+ G+ G+ G+ G PG  G PG +G PG  G+ G        KGD G PG  G+PG
Sbjct: 527 VGGKGQKGISGQPGQPGRPGAQGNPGLRGAPGAVGEPGDIFVAPGLKGDKGLPGRNGLPG 586

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------------------- 217
                        PG+ G+ GRDG PG PGL G P R G+                    
Sbjct: 587 Q------------PGQDGIPGRDGPPGFPGLKGEPAREGIKGERGPDGDPGPIGPPGERG 634

Query: 218 ----------------------GIPGKDGLPGKDGIPGTN----------GTNGEKGMTG 245
                                 G+PG  G PG+ G PG            G  GE G  G
Sbjct: 635 PPGLPGFGRPGQTGDKGSQGNPGVPGYPGRPGEKGEPGIGVSTPGPQGAPGPRGEPGREG 694

Query: 246 PRGNRGKSGINGVPGTPA 263
           P+G+ G  G +G+PG P 
Sbjct: 695 PKGDNGLPGDDGLPGFPG 712



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 83/177 (46%), Gaps = 35/177 (19%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           G KG+ G  G  G+ G+ G+ G PG  GPPG  G+ G+  + G KG+             
Sbjct: 571 GLKGDKGLPGRNGLPGQPGQDGIPGRDGPPGFPGLKGEPAREGIKGERGPDGDPGPIGPP 630

Query: 166 ----------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL----PGEPGLDGIP 211
                      G PG     GD+G +G  G  GYPGR G  G  G+    PG  G  G  
Sbjct: 631 GERGPPGLPGFGRPGQT---GDKGSQGNPGVPGYPGRPGEKGEPGIGVSTPGPQGAPGPR 687

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK-----GMTGPRGNRGKSGINGVPGTPA 263
           G  G +G  G +GLPG DG+PG  G  GE+     G  GP G +G SGI G PG P 
Sbjct: 688 GEPGREGPKGDNGLPGDDGLPGFPGEKGEQGPPGIGFPGPTGPKGSSGIPGAPGLPG 744



 Score = 43.1 bits (100), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 85/223 (38%), Gaps = 99/223 (44%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +G    +G  G +GE+G  G PGV         PG EG  GP      PGPQ
Sbjct: 770 GLPGPKGSQGH---QGIPGFQGEKGNIGLPGV---------PGREGHTGP------PGPQ 811

Query: 173 GIPGDEGKRGPKGDMGYPG--------------------------------RIGLDGRDG 200
           G+         KGD+G PG                                R G+ G  G
Sbjct: 812 GL---------KGDLGPPGLPGLVGKPGPPGKGLPGPPGLQGPPGEPGPYGREGVKGEKG 862

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPG------------KDGIPGTNGTNGE-------- 240
            PG PGLD +PG  G  G+PG  G+ G            +DG+ G  GT GE        
Sbjct: 863 YPGPPGLD-MPGPQGEKGVPGFPGVQGTKGLPGPPGLPGRDGLIGNQGTKGEMGLMGTPG 921

Query: 241 -------------------KGMTGPRGNRGKSGINGVPGTPAI 264
                               G+TGPRG+ G+ G+ G  G P +
Sbjct: 922 IPGYPGPPGTPGSPGPRGDPGLTGPRGDIGEPGLKGDRGEPGV 964


>gi|86613790|ref|NP_031763.2| collagen alpha-2(V) chain precursor [Mus musculus]
 gi|123797137|sp|Q3U962.1|CO5A2_MOUSE RecName: Full=Collagen alpha-2(V) chain; Flags: Precursor
 gi|74180993|dbj|BAE27775.1| unnamed protein product [Mus musculus]
 gi|74207233|dbj|BAE30805.1| unnamed protein product [Mus musculus]
 gi|148664463|gb|EDK96879.1| procollagen, type V, alpha 2 [Mus musculus]
          Length = 1497

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 470 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 520

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 521 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 580

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 581 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPG 637



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 85/189 (44%), Gaps = 18/189 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP--- 154
            M+G    T    P G QG  G+ G  G  G  G+ G  G  G PG  GP G  G     
Sbjct: 382 GMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPP 441

Query: 155 ---------------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                          G +G RG  GD G PG +G  G +G+ GP G  G  G  G +G+ 
Sbjct: 442 GLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKR 501

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G  G+PG  G PG  G  G PG  G PG DG+PG  G  GE+G  G  G +G  G  G P
Sbjct: 502 GPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRP 561

Query: 260 GTPAICAYK 268
           G P +   +
Sbjct: 562 GEPGLPGAR 570



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 88/170 (51%), Gaps = 22/170 (12%)

Query: 128 GEMGVKGERGEKGAPGV---VGP---PGPQGI------PGDEGKRGPKGDMGYPGPQGIP 175
           G  G++G+ G+ G PG     GP   PGP GI      PG+EGKRGP+GD G  GP   P
Sbjct: 457 GPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 513

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 514 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 570

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 571 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 620



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 86/165 (52%), Gaps = 9/165 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGHKG---LEGPKGEIGAPGAKGEAGPTGPMGAMGPL 333

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G  G  G PG  G  GIPG +G  G PG  G  G  
Sbjct: 334 GPRGMPGERGRLGPQ---GAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPT 390

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G  G  G++G TGP G  G  G+ G  GT      K  + S 
Sbjct: 391 GARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSA 435



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 265 GEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPT 324

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 325 GPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 384

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G  GP+G RG++G  G  G+
Sbjct: 385 GEAGPTGARGPEGPQGQRGETGPPGPAGS 413



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 75/161 (46%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  GA G  GP GP G  G  G R
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPR 336

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G+ G  GPQG PG  G  G  G  G  G +G+ G  G PG PG+ G  G  G  G  
Sbjct: 337 GMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPE 396

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G+ G PG  G+ G  G  G  G  G  G  G  GT
Sbjct: 397 GPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGT 437



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 745 GPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 804

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 805 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 863

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G +G  G+ G RG +G  G  G PG+
Sbjct: 864 --PGQKGDAGSPGPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGS 911



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 987  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1040

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1041 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGE 1100

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1101 PGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1144



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 91/189 (48%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 576 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGV 635

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 636 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGV 695

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PGEPG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+GN G +G  G  G 
Sbjct: 696 PGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGP 755

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 756 PGLQGMPGE 764



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 100/238 (42%), Gaps = 69/238 (28%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP G   P G P
Sbjct: 532 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 591

Query: 155 GDEGKRGPKGD---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----- 200
           G++G+ GP G          MG PGP+G  GD GK G  G+ G PG+ G  G+DG     
Sbjct: 592 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPS 651

Query: 201 -------------------------------------------LPGEPGLDGIPGRNGMD 217
                                                      +PGEPG  G  G  G  
Sbjct: 652 GPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGER 711

Query: 218 GIPGK------DGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPAICA 266
           G PG+       GLPG+ G+ G +G +G KG  GP    G+ G  G+ G+PG   I  
Sbjct: 712 GNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAG 769



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 91/179 (50%), Gaps = 30/179 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 294 PGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGK 353

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGL------------------PGEPGL 207
            G  G+PG  G  GP    G  G+PG  G+ G  G                   PG  G 
Sbjct: 354 RGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGS 413

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G DG PG  G  G  G        G  G+ G +G TGP+G RG+SG  GVPG
Sbjct: 414 QGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPG 472



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 79/179 (44%), Gaps = 36/179 (20%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------EGKRGPKGDM 166
           GP G  GE G  G  G  G+RG  G PG  GP GP GIPG          +G+ GP G  
Sbjct: 334 GPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGAR 393

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG----------------------- 203
           G  GPQG  G+ G  GP G  G PG +G DG  G  G                       
Sbjct: 394 GPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQ 453

Query: 204 -EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  GI G++G  G+PG  G  G  G PG +G    +G  GP G  GK G  G PGT
Sbjct: 454 GSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGI---QGPIGPPGEEGKRGPRGDPGT 509



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 88/190 (46%), Gaps = 39/190 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 599 PPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 658

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PG+ G     GP+G+ G PG  G
Sbjct: 659 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERG 718

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
             G  GLPGE G+ G  G +G  G PG  G  G  G PG  G  GE+G+    GP+G+RG
Sbjct: 719 EPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRG 778

Query: 252 KSGINGVPGT 261
             G  G  GT
Sbjct: 779 GIGEKGAEGT 788



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 699 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGL 758

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 759 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 818

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 819 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 865



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 82/187 (43%), Gaps = 48/187 (25%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKG---------DMGYP 169
           GE GA G +G +GERG   E+G PG+ G PG +G+ G  G  GPKG         D G P
Sbjct: 697 GEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPP 756

Query: 170 GPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDG-------------------------- 200
           G QG+PG+ G     GPKGD G  G  G +G  G                          
Sbjct: 757 GLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEP 816

Query: 201 ----LPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               L G PG  G PG  G +G  G  G     G DG PG  G  GE G  G  G+ G  
Sbjct: 817 GPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQ 876

Query: 254 GINGVPG 260
           G+ G PG
Sbjct: 877 GLAGSPG 883



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 70/148 (47%), Gaps = 27/148 (18%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           ++G  G PG VGP GP+G  G+ G+RG  G  G PG +G+ G  G  GPKG+ G  G IG
Sbjct: 692 DQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIG 751

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG--------------- 239
                   G PGL G+PG  G+ G PG  G  G  G  G  GT G               
Sbjct: 752 DT------GPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPG 805

Query: 240 ------EKGMTGPRGNRGKSGINGVPGT 261
                 EKG  GPRG  G  G  G PG+
Sbjct: 806 PAGPTGEKGEPGPRGLVGPPGSRGNPGS 833



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 82/205 (40%), Gaps = 48/205 (23%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 210 PGSVGPVGPRGPQGLQGQQGGVGPAGPPGEPGEPGPMGPIGSRGPEGPPGKPGEDGEPGR 269

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 270 NGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGA 329

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 330 MGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 389

Query: 244 TGPRGNRGKSGINGVPGTPAICAYK 268
           TG RG  G  G  G  G P     +
Sbjct: 390 TGARGPEGPQGQRGETGPPGPAGSQ 414



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 54/104 (51%), Gaps = 6/104 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 814 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 873

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           GPQG+    G  GP G  G PG  G  G  G PG  G  G  GR
Sbjct: 874 GPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGSAGR 914



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 65/140 (46%), Gaps = 39/140 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G  G  G  G +G +G+RG+         PGP G+PG +G        G PGP
Sbjct: 1044 PGPEGPAGNDGTPGRDGAVGERGDRGD---------PGPAGLPGSQGA------PGTPGP 1088

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PGD G+R                  G PG  G  G PGR       GK GLPG  G 
Sbjct: 1089 VGAPGDAGQR------------------GEPGSRGPVGPPGRA------GKRGLPGPQGP 1124

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G NG++G  G +G+RG
Sbjct: 1125 RGDKGDNGDRGDRGQKGHRG 1144



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  G+ G RGP G  G  G 
Sbjct: 1056 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGEPGSRGPVGPPGRAGK 1115

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1116 RGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1145



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 81/198 (40%), Gaps = 63/198 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 824  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 883

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 884  PHGPHGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPAGEPGKEGPPGLRG 943

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 944  DPGSHGRVGDRGPAGPPGSPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1003

Query: 228  KDGIPGTNGTNGEKGMTG 245
              G+PG  GT G+ G TG
Sbjct: 1004 MPGLPGPAGTPGKVGPTG 1021



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 87/233 (37%), Gaps = 84/233 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP G  G  G +G +G  G PG  
Sbjct: 847  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHGVPGLKGGRGTQGPPGAT 906

Query: 173  GIPGDEG---------------------KRGP---KGDMGYPGRI--------------- 193
            G PG  G                     K GP   +GD G  GR+               
Sbjct: 907  GFPGSAGRVGPPGPAGAPGPAGPAGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGSPGDK 966

Query: 194  GLDGRD---------------------GLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
            G  G D                     G+PG+ G  G+PG  G  G PGK G        
Sbjct: 967  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 1026

Query: 226  -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                             PG +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 1027 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1079


>gi|168335603|ref|ZP_02693660.1| hypothetical protein Epulo_10952 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 854

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 89/149 (59%), Gaps = 6/149 (4%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G +GE G++G +GE G  G+ G PG QGI G+ G++G +G  G  G QGIPG++G +G  
Sbjct: 80  GIQGEQGIQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGIQGEQGIQGIPGEQGIQGIP 139

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGI---PGTNGTN 238
           G+ G  G  G  G  G+PGE G+ GIPG  G+ GIPG+ G+   PG+ GI   PG  G  
Sbjct: 140 GEQGIQGIPGEQGIQGIPGEQGIQGIPGEQGIQGIPGEQGIQGEPGEQGIQGEPGEQGIQ 199

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           GE G  G +G +G+ GI G PG   I   
Sbjct: 200 GEPGEQGIQGEQGEQGIQGEPGEQGIQGE 228



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 3/146 (2%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           +GE G++G +GE+G  G+ G PG QGI G+ G++G +G+ G  G QGI G++G +G  G+
Sbjct: 73  QGEQGIQGIQGEQGIQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGIQGEQGIQGIPGE 132

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G  G  G  G  G+PGE G+ GIPG  G+ GIPG+ G+    GIPG  G  GE G  G 
Sbjct: 133 QGIQGIPGEQGIQGIPGEQGIQGIPGEQGIQGIPGEQGIQ---GIPGEQGIQGEPGEQGI 189

Query: 247 RGNRGKSGINGVPGTPAICAYKRESC 272
           +G  G+ GI G PG   I   + E  
Sbjct: 190 QGEPGEQGIQGEPGEQGIQGEQGEQG 215



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 97/178 (54%), Gaps = 18/178 (10%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   QG      E    G+QG  G++G  G  GE G++GE GE+G  G+ G  G QGIPG
Sbjct: 72  IQGEQGIQGIQGEQGIQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGIQGEQGIQGIPG 131

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           ++G +G  G+ G    QGIPG++G +      G PG  G+    G+PGE G+ GIPG  G
Sbjct: 132 EQGIQGIPGEQGI---QGIPGEQGIQ------GIPGEQGI---QGIPGEQGIQGIPGEQG 179

Query: 216 MDGIPGKDGL---PGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           + G PG+ G+   PG+ GI   PG  G  GE+G  G +G  G+ GI G PG   I   
Sbjct: 180 IQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEQGEQGIQGEPGEQGIQGEPGEQGIQGE 237



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 89/156 (57%), Gaps = 3/156 (1%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+QG  G++G  G  GE G++GE GE+G   + G PG QGI G+ G++G +G+ G  G Q
Sbjct: 161 GIQGIPGEQGIQGIPGEQGIQGEPGEQG---IQGEPGEQGIQGEPGEQGIQGEQGEQGIQ 217

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG++G +G  G+ G  G  G  G  G PGE G+ G PG  G+ G PG+ G+ G  G  
Sbjct: 218 GEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGDKGEK 277

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G+KG  G +G++G+ G  G  G       K
Sbjct: 278 GDKGEKGDKGEKGNQGDKGEKGDKGEKGNQGDKGEK 313



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 102/198 (51%), Gaps = 21/198 (10%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   QG      E    G+QG  G++G  G  GE G++G +GE+G  G+ G  G QGIPG
Sbjct: 81  IQGEQGIQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGIQGEQGIQGIPGEQGIQGIPG 140

Query: 156 DEGKRG---PKGDMGYPGPQGI---PGDEGKRG---PKGDMGYPGRIGLDGR---DGLPG 203
           ++G +G    +G  G PG QGI   PG++G +G    +G  G PG  G+ G     G+ G
Sbjct: 141 EQGIQGIPGEQGIQGIPGEQGIQGIPGEQGIQGIPGEQGIQGEPGEQGIQGEPGEQGIQG 200

Query: 204 EPGLDGIPGRNGMDGI---PGKDGL---PGKDGI---PGTNGTNGEKGMTGPRGNRGKSG 254
           EPG  GI G  G  GI   PG+ G+   PG+ GI   PG  G  GE G  G +G  G+ G
Sbjct: 201 EPGEQGIQGEQGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQG 260

Query: 255 INGVPGTPAICAYKRESC 272
           I G PG   I   K E  
Sbjct: 261 IQGEPGEQGIQGDKGEKG 278



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 85/149 (57%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G  GE G +GE G +G +GE G  G+ G PG QGI G++G++G +G+ G  G 
Sbjct: 166 PGEQGIQGIPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEQGEQGIQGEPGEQGI 225

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QG PG++G +G  G+ G  G  G  G  G PGE G+ G PG  G+ G  G+ G  G+ G 
Sbjct: 226 QGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGDKGEKGDKGEKGD 285

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G+KG  G +G +G  G  G  G
Sbjct: 286 KGEKGNQGDKGEKGDKGEKGNQGDKGEKG 314



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 96/181 (53%), Gaps = 12/181 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG---YP 169
           G+QG  G++G  G  GE G++G  GE+G  G+ G  G QGIPG++G +G  G+ G    P
Sbjct: 134 GIQGIPGEQGIQGIPGEQGIQGIPGEQGIQGIPGEQGIQGIPGEQGIQGEPGEQGIQGEP 193

Query: 170 GPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL- 225
           G QGI   PG++G +G +G+ G  G  G  G  G PGE G+ G PG  G+ G PG+ G+ 
Sbjct: 194 GEQGIQGEPGEQGIQGEQGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQ 253

Query: 226 --PGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSET 280
             PG+ GI   PG  G  G+KG  G +G +G  G  G  G       K E  +     E 
Sbjct: 254 GEPGEQGIQGEPGEQGIQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGNQGDKGEK 313

Query: 281 S 281
            
Sbjct: 314 G 314



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 85/171 (49%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            +QG          PG QG  G+ GE G +GE G +G +GE G  G+ G PG QGI G+ 
Sbjct: 206 GIQGEQGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEP 265

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G++G +GD G  G +G  GD+G++G +GD G  G  G  G  G  GE G  G  G  G  
Sbjct: 266 GEQGIQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDK 325

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G  G  G  G  G  GEKG  G +GN+G  G  G  G       K
Sbjct: 326 GEKGDKGDKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGDKGEK 376



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 84/165 (50%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E    G QG  G+KG+ G +G+ G KG++GEKG  G  G  G QG  G++G +G KGD G
Sbjct: 462 EKGDKGNQGDKGEKGDQGNQGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKGDKGEKGDTG 521

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G +G  GD+G++G KG+ G  G  G  G  G  G  G  G  G  G  G  G  G  G
Sbjct: 522 NQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGNQGDKG 581

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
           + G  G  G  GEKG  G +G++G+ G  G  G       K E  
Sbjct: 582 EKGDKGEKGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKGDKGEKG 626



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 85/155 (54%), Gaps = 3/155 (1%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E    G QG  G+KG+ G KG+ G +G++GEKG  G  G  G QG  G++G +G KGD G
Sbjct: 498 EKGDQGNQGDKGEKGDKGEKGDTGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKG 557

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G +G  GD+G++G KG+ G  G  G  G  G  GE G  G  G  G  G  G  G  G
Sbjct: 558 NQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGEKGDKGEKGDKGEKGDQGNQGDKG 617

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           + G  G  G  GE+G  GP+G++   GI+G  G P
Sbjct: 618 EKGDKGEKGDPGEQGPEGPKGDQ---GIDGPAGGP 649



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 82/156 (52%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QG  G+KG+ G KG  G KGE+G+KG  G  G  G +G  G++G +G +GD G  G Q
Sbjct: 419 GNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDQ 478

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  GD+G++G KG+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G+ G  
Sbjct: 479 GNQGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKGDKGEKGDTGNQGDKGEKGDKGEKGDK 538

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  GEKG  G +G++G  G  G  G       K
Sbjct: 539 GNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDK 574



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 83/154 (53%), Gaps = 3/154 (1%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYP 169
           G QG  G KGE G KGE G KGE+G++G  G  G  G +G  GD   +G +G KGD G  
Sbjct: 476 GDQGNQGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKGDKGEKGDTGNQGDKGEKGDKGEK 535

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G +G  GD+G++G KG+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G+ 
Sbjct: 536 GDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGEK 595

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  GEKG  G +G++G+ G  G  G P 
Sbjct: 596 GDKGEKGDKGEKGDQGNQGDKGEKGDKGEKGDPG 629



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 84/178 (47%), Gaps = 3/178 (1%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             QG      E    G +G  G+KG  G KGE G KGE+G +G  G  G  G +G  GD+
Sbjct: 266 GEQGIQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDK 325

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G++G KGD G  G +G  GD+G++G KG+    G  G  G  G  G  GE G  G  G  
Sbjct: 326 GEKGDKGDKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEK 385

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
           G  G  G  G  G  G  G  G  GEKG  G +GN+G  G  G  G       K E  
Sbjct: 386 GDKGNQGDKGEKGNQGDKGEKGDKGEKGDKGDKGNQGDKGEKGDKGEKGNQGDKGEKG 443



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 80/152 (52%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
              PG QG  G KGE G KGE G KGE+G +G  G  G  G +G  GD+G++G KGD G 
Sbjct: 262 QGEPGEQGIQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGN 321

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G +G  GD+G +G +GD G  G  G  G  G  G  G  G  G  G  G  G+ G  G 
Sbjct: 322 QGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGDKGEKGNQGD 381

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G+KG  G +G++G+ G  G  G
Sbjct: 382 KGEKGDKGNQGDKGEKGNQGDKGEKGDKGEKG 413



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 84/182 (46%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG      +    G QG  G+KG+ G KG  G KGE+G+KG  G  G  G QG  G++G 
Sbjct: 307 QGDKGEKGDKGDKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGD 366

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G KGD G  G QG  G++G +G +GD G  G  G  G  G  GE G  G  G  G  G 
Sbjct: 367 KGEKGDKGEKGNQGDKGEKGDKGNQGDKGEKGNQGDKGEKGDKGEKGDKGDKGNQGDKGE 426

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
            G  G  G  G  G  G  G+KG  G +G +G  G  G  G       K +  +     E
Sbjct: 427 KGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDQGNQGDKGE 486

Query: 280 TS 281
             
Sbjct: 487 KG 488



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 3/164 (1%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
              PG QG  G+ GE G +GE G +G +GE G  G+ G PG QGI GD   +G KGD G 
Sbjct: 226 QGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGD---KGEKGDKGE 282

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G +G  G++G +G KGD G  G  G  G  G  G+ G  G  G  G  G  G  G  G+
Sbjct: 283 KGDKGEKGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKGDKGDKGNQGDKGE 342

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
            G  G  G  GEKG  G +G +G  G  G  G       K E  
Sbjct: 343 KGDKGEKGDKGEKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKG 386



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 82/160 (51%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
              PG QG  G+ GE G +G+ G KG++GEKG  G  G  G +G  GD+G++G +GD G 
Sbjct: 253 QGEPGEQGIQGEPGEQGIQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGNQGDKGE 312

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G +G  G++G +G KGD G  G  G  G  G  GE G  G  G  G  G  G  G  G 
Sbjct: 313 KGDKGDKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGD 372

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G  GEKG  G +G++G+ G  G  G       K
Sbjct: 373 KGEKGNQGDKGEKGDKGNQGDKGEKGNQGDKGEKGDKGEK 412



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 83/163 (50%), Gaps = 3/163 (1%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGYP 169
           G +G  G KG  G KGE G KGE+G+KG  G  G  G QG  GD+G+   +G KGD G  
Sbjct: 440 GEKGDKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDQGNQGDKGEKGDKGEKGDKGEK 499

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G QG  GD+G++G KG+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G  
Sbjct: 500 GDQGNQGDKGEKGDKGEKGDTGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGNQ 559

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
           G  G  G  GEKG  G +G++G+ G  G  G       K E  
Sbjct: 560 GDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGEKGDKGEKG 602



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 85/176 (48%), Gaps = 3/176 (1%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG      +    G QG  G+KG+ G KG  G KGE+G+KG  G  G  G +G  GD+G 
Sbjct: 421 QGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDQGN 480

Query: 160 ---RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
              +G KGD G  G +G  GD+G +G KG+ G  G  G  G  G  GE G  G  G  G 
Sbjct: 481 QGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKGDKGEKGDTGNQGDKGEKGDKGEKGDKGN 540

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
            G  G+ G  G+ G  G  G  GEKG  G +G++G  G  G  G       K E  
Sbjct: 541 QGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGEKG 596



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 86/173 (49%), Gaps = 9/173 (5%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--- 165
              PG QG  G++GE G +GE G +G +GE G  G+ G PG QGI G+ G++G +G+   
Sbjct: 199 QGEPGEQGIQGEQGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGE 258

Query: 166 ---MGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
               G PG QGI GD+G+   +G KGD G  G  G  G  G  GE G  G  G  G  G 
Sbjct: 259 QGIQGEPGEQGIQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGNQGDKGEKGDKGD 318

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
            G  G  G+ G  G  G  G+KG  G +G +G  G  G  G       K E  
Sbjct: 319 KGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKG 371



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 84/173 (48%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG      +    G QG  G+KG+ G KG+ G KG +G+KG  G  G  G +G  G++G 
Sbjct: 322 QGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGDKGEKGNQGD 381

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G KGD G  G +G  G++G +G KGD G  G  G  G  G  GE G  G  G  G  G 
Sbjct: 382 KGEKGDKGNQGDKGEKGNQGDKGEKGDKGEKGDKGDKGNQGDKGEKGDKGEKGNQGDKGE 441

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
            G  G  G  G  G  G  GEKG  G +G++G+ G  G  G       K E  
Sbjct: 442 KGDKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDQGNQGDKGEKGDKGEKG 494



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 84/165 (50%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E    G QG  G+KG  G KGE G KGE+G+KG  G  G  G +G  G++G +G KG+ G
Sbjct: 384 EKGDKGNQGDKGEKGNQGDKGEKGDKGEKGDKGDKGNQGDKGEKGDKGEKGNQGDKGEKG 443

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G +G  GD+G++G KG+ G  G  G  G  G  G  G  G  G  G  G  G+ G  G
Sbjct: 444 DKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDQGNQGDKGEKGDKGEKGDKGEKGDQG 503

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
             G  G  G  GEKG TG +G++G+ G  G  G       K E  
Sbjct: 504 NQGDKGEKGDKGEKGDTGNQGDKGEKGDKGEKGDKGNQGDKGEKG 548



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 94/191 (49%), Gaps = 26/191 (13%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E    G QG  G+KG+ G KG+ G +G++GEKG  G  G  G QG  G++G +G KGD G
Sbjct: 534 EKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKG 593

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG------ 221
             G +G  GD+G++G +G+ G  G  G  G  G PGE G +G  G  G+DG  G      
Sbjct: 594 EKGDKGEKGDKGEKGDQGNQGDKGEKGDKGEKGDPGEQGPEGPKGDQGIDGPAGGPQGPI 653

Query: 222 ----------KDGLPG------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                     K G  G      K G  G  G  G++G+ GP G +G  GI G  G   I 
Sbjct: 654 GPQGIQGPAGKQGARGIQGPVGKQGARGIQGPAGKQGIQGPAGKQGARGIQGPKGESGIL 713

Query: 266 AYKRESCSLLP 276
               ES  LLP
Sbjct: 714 ---NESL-LLP 720



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 84/165 (50%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E    G +G  G KGE G KGE G +G++GEKG  G  G  G +G  GD+G++G KG+ G
Sbjct: 354 EKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGNQGDKGEKGNQGDKGEKGDKGEKG 413

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G +G  GD+G++G KG+ G  G  G  G  G  G  G  G  G  G  G  G  G  G
Sbjct: 414 DKGDKGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGNQGDKG 473

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
           + G  G  G  GEKG  G +G++G+ G  G  G       K E  
Sbjct: 474 EKGDQGNQGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKGDKGEKG 518



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 82/177 (46%), Gaps = 6/177 (3%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD- 156
             QG      E    G +G  G KGE G KGE G +G++GEKG  G  G  G +G  GD 
Sbjct: 257 GEQGIQGEPGEQGIQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGNQGDKGEKGDK 316

Query: 157 -----EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                +G +G KGD G  G QG  G++G +G KGD G  G  G  G  G  GE G  G  
Sbjct: 317 GDKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGDKGEK 376

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G  G  G  G  G  G  G  GEKG  G +G++G  G  G  G       K
Sbjct: 377 GNQGDKGEKGDKGNQGDKGEKGNQGDKGEKGDKGEKGDKGDKGNQGDKGEKGDKGEK 433



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 92/160 (57%), Gaps = 12/160 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMGYP 169
           G+QG  G++G  G  GE G++G  GE+G  G+ G  G QGIPG++G +G    +G  G P
Sbjct: 125 GIQGIPGEQGIQGIPGEQGIQGIPGEQGIQGIPGEQGIQGIPGEQGIQGIPGEQGIQGEP 184

Query: 170 GPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL- 225
           G QGI   PG++G +G  G+ G  G  G  G  G PGE G+ G PG  G+ G PG+ G+ 
Sbjct: 185 GEQGIQGEPGEQGIQGEPGEQGIQGEQGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQ 244

Query: 226 --PGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG+ GI   PG  G  GE G  G +G++G+ G  G  G
Sbjct: 245 GEPGEQGIQGEPGEQGIQGEPGEQGIQGDKGEKGDKGEKG 284



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 83/165 (50%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E    G +G  G +G+ G KG+ G +G++GEKG  G  G  G +G  G++G +G KGD G
Sbjct: 456 EKGDKGEKGDKGNQGDKGEKGDQGNQGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKGDKG 515

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G  G  GD+G++G KG+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G
Sbjct: 516 EKGDTGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKG 575

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
             G  G  G  GEKG  G +G++G+ G  G  G       K E  
Sbjct: 576 NQGDKGEKGDKGEKGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKG 620



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 82/161 (50%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E    G +G  G KGE G KG+ G +G++GEKG  G  G  G +G  GD+G +G +GD G
Sbjct: 396 EKGNQGDKGEKGDKGEKGDKGDKGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKG 455

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G +G  GD+G +G KG+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G
Sbjct: 456 EKGDKGEKGDKGNQGDKGEKGDQGNQGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKGDKG 515

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           + G  G  G  GEKG  G +G++G  G  G  G       K
Sbjct: 516 EKGDTGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDK 556



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 80/160 (50%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +G  G+KG+ G KG  G KGE+G+KG  G  G  G QG  G++G +G +GD G  G Q
Sbjct: 341 GEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGNQGDKGEKGNQ 400

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G++G +G KGD G  G  G  G  G  GE G  G  G  G  G  G  G  G+ G  
Sbjct: 401 GDKGEKGDKGEKGDKGDKGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKGDK 460

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
           G  G  G +G  G +G++G  G  G  G       K E  
Sbjct: 461 GEKGDKGNQGDKGEKGDQGNQGDKGEKGDKGEKGDKGEKG 500



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 82/160 (51%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +G  G KGE G KGE G KG++G +G  G  G  G +G  GD+G++G KGD G  G +
Sbjct: 395 GEKGNQGDKGEKGDKGEKGDKGDKGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDK 454

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  GD+G++G KG+ G  G  G  G  G  GE G  G  G  G  G  G  G  G+ G  
Sbjct: 455 GEKGDKGEKGDKGNQGDKGEKGDQGNQGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKGDK 514

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
           G  G  G +G  G +G++G+ G  G  G       K E  
Sbjct: 515 GEKGDTGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKG 554



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 82/173 (47%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG      +    G QG  G+KG+ G KG  G KGE+G+KG  G  G  G +G  G++G 
Sbjct: 292 QGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGD 351

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G KG+ G  G +G  G++G +G KG+ G  G  G  G  G  GE G  G  G  G  G 
Sbjct: 352 KGEKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGNQGDKGEKGNQGDKGEKGDKGE 411

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
            G  G  G  G  G  G  GEKG  G +G +G  G  G  G       K E  
Sbjct: 412 KGDKGDKGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKG 464



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 82/166 (49%), Gaps = 6/166 (3%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--- 165
              PG QG  G+ GE G +GE G +G +GE G  G+ G PG QGI G+ G++G +G+   
Sbjct: 190 QGEPGEQGIQGEPGEQGIQGEQGEQGIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGEPGE 249

Query: 166 ---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
               G PG QGI G+ G++G +GD G  G  G  G  G  G  G  G  G  G  G  G 
Sbjct: 250 QGIQGEPGEQGIQGEPGEQGIQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGNQGD 309

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G  G  G  GEKG  G +GN+G  G  G  G       K
Sbjct: 310 KGEKGDKGDKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGEK 355



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 80/156 (51%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+QG  G++G  G  GE G++GE GE+G  G  G  G +G  GD+G++G +GD G  G +
Sbjct: 242 GIQGEPGEQGIQGEPGEQGIQGEPGEQGIQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDK 301

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G++G +G KGD G  G  G  G  G  G+ G  G  G  G  G  G  G  G  G  
Sbjct: 302 GEKGNQGDKGEKGDKGDKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGEKGNQGDK 361

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  GEKG  G +GN+G  G  G  G       K
Sbjct: 362 GEKGDKGEKGDKGEKGNQGDKGEKGDKGNQGDKGEK 397



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 83/160 (51%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +G  G KG+ G +G+ G KG++GEKG  G  G  G +G  G++G +G KGD G  G +
Sbjct: 407 GDKGEKGDKGDKGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDK 466

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  GD+G++G +G+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G  G  
Sbjct: 467 GNQGDKGEKGDQGNQGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKGDKGEKGDTGNQGDK 526

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
           G  G  GEKG  G +G++G+ G  G  G       K E  
Sbjct: 527 GEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKG 566



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 85/173 (49%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG      +    G +G  G +G+ G KG+ G +G++GEKG  G  G  G +G  GD+G 
Sbjct: 358 QGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGNQGDKGEKGNQGDKGEKGDKGEKGDKGD 417

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G +GD G  G +G  G++G +G KGD G  G  G  G  G  GE G  G  G  G  G 
Sbjct: 418 KGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGD 477

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
            G  G  G+ G  G  G  GEKG  G +G++G+ G  G  G       K E  
Sbjct: 478 QGNQGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKGDKGEKGDTGNQGDKGEKG 530



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 79/169 (46%), Gaps = 9/169 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------QGIPGDEGKRGPK 163
           G QG  G+KG+ G KG  G KGE+G+KG  G  G  G          QG  G++G +G K
Sbjct: 290 GNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEK 349

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           GD G  G QG  G++G +G KGD G  G  G  G  G  G  G  G  G  G  G  G  
Sbjct: 350 GDKGEKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGNQGDKGEKGNQGDKGEKGDK 409

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
           G  G  G  G  G  GEKG  G +GN+G  G  G  G       K E  
Sbjct: 410 GEKGDKGDKGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKG 458



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 86/167 (51%), Gaps = 6/167 (3%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG      +    G QG  G+KG+ G KG+ G +G++GEKG  G  G  G +G  G++G 
Sbjct: 436 QGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDQGNQGDKGEKGDKGEKGD 495

Query: 160 RGPKGDMGYPGPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           +G KGD G  G +G  GD+G++      G KG+ G  G  G  G  G  GE G  G  G 
Sbjct: 496 KGEKGDQGNQGDKGEKGDKGEKGDTGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGD 555

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G+ G  G+ G  G  G  GEKG  G +G++G+ G  G  G
Sbjct: 556 KGNQGDKGEKGDKGEKGDKGNQGDKGEKGDKGEKGDKGEKGDKGEKG 602



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 84/163 (51%), Gaps = 3/163 (1%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+QG  G++G  G  GE G++G++GEKG  G  G  G +G  GD+G++G KG+ G  G +
Sbjct: 251 GIQGEPGEQGIQGEPGEQGIQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEKGNQGDK 310

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  GD+G +G +GD G  G  G  G  G  GE    G  G  G  G  G  G+ G  G+ 
Sbjct: 311 GEKGDKGDKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGEK 370

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
           G  G  G  G+KG  G +GN+G  G  G  G       K E  
Sbjct: 371 GDKGEKGNQGDKGEKGDKGNQGDKGEKGNQGDKGEKGDKGEKG 413



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 82/169 (48%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +G  G KGE G +G+ G KG++GEKG  G  G  G +G  GD+G +G KG+ G  G +
Sbjct: 344 GDKGEKGDKGEKGNQGDKGEKGDKGEKGDKGEKGNQGDKGEKGDKGNQGDKGEKGNQGDK 403

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  GD+G++G KGD G  G  G  G  G  G  G  G  G  G  G  G  G  G  G  
Sbjct: 404 GEKGDKGEKGDKGDKGNQGDKGEKGDKGEKGNQGDKGEKGDKGDKGNQGDKGEKGDKGEK 463

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
           G  G  G+KG  G +GN+G  G  G  G       K +  +     E  
Sbjct: 464 GDKGNQGDKGEKGDQGNQGDKGEKGDKGEKGDKGEKGDQGNQGDKGEKG 512



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 79/156 (50%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +G  G +G+ G KG  G KGE+G+KG  G  G  G QG  G++G +G KG+ G  G +
Sbjct: 383 GEKGDKGNQGDKGEKGNQGDKGEKGDKGEKGDKGDKGNQGDKGEKGDKGEKGNQGDKGEK 442

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  GD+G +G KG+ G  G  G  G  G  GE G  G  G  G  G  G+ G  G+ G  
Sbjct: 443 GDKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDQGNQGDKGEKGDKGEKGDKGEKGDQ 502

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  GEKG  G +G+ G  G  G  G       K
Sbjct: 503 GNQGDKGEKGDKGEKGDTGNQGDKGEKGDKGEKGDK 538



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 83/174 (47%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E    G +G  G KG  G KGE G +G++GEKG  G  G  G +G  GD+G++G KG+ G
Sbjct: 375 EKGNQGDKGEKGDKGNQGDKGEKGNQGDKGEKGDKGEKGDKGDKGNQGDKGEKGDKGEKG 434

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G +G  GD+G +G +GD G  G  G  G  G  G+ G  G  G  G  G  G  G  G
Sbjct: 435 NQGDKGEKGDKGDKGNQGDKGEKGDKGEKGDKGNQGDKGEKGDQGNQGDKGEKGDKGEKG 494

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
             G  G  G  G+KG  G +G +G +G  G  G       K +  +     E  
Sbjct: 495 DKGEKGDQGNQGDKGEKGDKGEKGDTGNQGDKGEKGDKGEKGDKGNQGDKGEKG 548


>gi|344287255|ref|XP_003415369.1| PREDICTED: collagen alpha-2(IX) chain-like [Loxodonta africana]
          Length = 750

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/169 (44%), Positives = 88/169 (52%), Gaps = 12/169 (7%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            M+G          PG QG  G  G+ G KG  G KGE G+ G PG  GPPG +G PG +
Sbjct: 377 GMKGSVGQAGRPGNPGHQGLAGVPGQPGTKGGPGDKGEPGQPGLPGFSGPPGKEGEPGPQ 436

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G+ GP+G MG  G      D+G+RGP G  G  GR G  G  G PG PG  G+PG  G  
Sbjct: 437 GEIGPQGIMGQKG------DQGERGPVGQPGPQGRQGPKGEQGSPGIPGPQGLPGIKGEK 490

Query: 218 GIPGKDGL------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGK G       PG  G+PG  G  GE G  GP+G +G  G  G PG
Sbjct: 491 GSPGKTGPRGSVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPG 539



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 90/165 (54%), Gaps = 21/165 (12%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GEIG +G MG KG++GE+G         P G PG +G++GPKG+ G PG
Sbjct: 426 PPGKEGEPGPQGEIGPQGIMGQKGDQGERG---------PVGQPGPQGRQGPKGEQGSPG 476

Query: 171 ---PQGIP------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
              PQG+P      G  GK GP+G +G PG  GL G     GE G  G PG  G  G+ G
Sbjct: 477 IPGPQGLPGIKGEKGSPGKTGPRGSVGDPGVAGLPGEK---GEKGESGEPGPKGQQGVRG 533

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           + G PG  G  G  G  G  G+ GPRG  G  GI G+PG   +  
Sbjct: 534 EPGYPGPSGDAGAPGPQGYPGLPGPRGLAGDRGIPGLPGRQGVAG 578



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 93/188 (49%), Gaps = 48/188 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEM------------------GVKGERGEKGAPGVVGPPGPQGI 153
           PG QG  G KG++GA GE                   G KGE G  G  G+VG  G  G 
Sbjct: 265 PGRQGKPGPKGDVGASGEQGIPGPPGPPGIRGYPGMAGAKGEMGPHGYKGMVGSIGAAGS 324

Query: 154 PGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG- 206
           PG+EG RGP      KGD+G    QG+ G +G  GPKG  G PG   +DG+DG PG PG 
Sbjct: 325 PGEEGPRGPPGRAGEKGDVGS---QGVQGPQGITGPKGATGPPG---IDGKDGTPGTPGM 378

Query: 207 -----------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                            L G+PG+ G  G PG  G PG+ G+PG +G  G++G  GP+G 
Sbjct: 379 KGSVGQAGRPGNPGHQGLAGVPGQPGTKGGPGDKGEPGQPGLPGFSGPPGKEGEPGPQGE 438

Query: 250 RGKSGING 257
            G  GI G
Sbjct: 439 IGPQGIMG 446



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 86/160 (53%), Gaps = 21/160 (13%)

Query: 98  AMQGFCNSTKEYCPPGLQGPI------GQKGE------IGAKGEMGVKGERGEKGAPGVV 145
            + GF     +   PG QG I      GQKG+      +G  G  G +G +GE+G+PG+ 
Sbjct: 419 GLPGFSGPPGKEGEPGPQGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGSPGI- 477

Query: 146 GPPGPQGIP------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
             PGPQG+P      G  GK GP+G +G PG  G+PG++G++G  G+ G  G+ G+ G  
Sbjct: 478 --PGPQGLPGIKGEKGSPGKTGPRGSVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEP 535

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           G PG  G  G PG  G  G+PG  GL G  GIPG  G  G
Sbjct: 536 GYPGPSGDAGAPGPQGYPGLPGPRGLAGDRGIPGLPGRQG 575



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 81/161 (50%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG         PPG+ G  G  G  G KG +G  G  G  G  G+ G PG  G  G  G 
Sbjct: 352 QGITGPKGATGPPGIDGKDGTPGTPGMKGSVGQAGRPGNPGHQGLAGVPGQPGTKGGPGD 411

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G  G PG  G PG EG+ GP+G++G  G +G  G  G  G  G  G  GR G  G 
Sbjct: 412 KGEPGQPGLPGFSGPPGKEGEPGPQGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGE 471

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+PG  G+PG  G  G  G TGPRG+ G  G+ G+PG
Sbjct: 472 QGSPGIPGPQGLPGIKGEKGSPGKTGPRGSVGDPGVAGLPG 512



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 76/136 (55%), Gaps = 12/136 (8%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGI 153
           QG      +  P G QGP G++G  G  G  G+ G +GEKG+PG  GP      PG  G+
Sbjct: 451 QGERGPVGQPGPQGRQGPKGEQGSPGIPGPQGLPGIKGEKGSPGKTGPRGSVGDPGVAGL 510

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG++G++G  G+ G  G QG+ G+ G  GP GD G P      G  G PG PG  G+ G 
Sbjct: 511 PGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAP------GPQGYPGLPGPRGLAGD 564

Query: 214 NGMDGIPGKDGLPGKD 229
            G+ G+PG+ G+ G+D
Sbjct: 565 RGIPGLPGRQGVAGRD 580



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 83/171 (48%), Gaps = 9/171 (5%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +V   G   S  E  P   +GP G+ GE G  G  GV+G +G  G  G  GPPG  G  G
Sbjct: 315 MVGSIGAAGSPGEEGP---RGPPGRAGEKGDVGSQGVQGPQGITGPKGATGPPGIDGKDG 371

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G  G KG +G     G PG+ G +G  G  G PG  G  G  G PG+PGL G  G  G
Sbjct: 372 TPGTPGMKGSVGQ---AGRPGNPGHQGLAGVPGQPGTKGGPGDKGEPGQPGLPGFSGPPG 428

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
            +G PG  G  G  GI G  G  GE+   G  GP+G +G  G  G PG P 
Sbjct: 429 KEGEPGPQGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGSPGIPG 479



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 82/176 (46%), Gaps = 30/176 (17%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------- 152
           CP G++GP G +G  G  G  G+ G+ G +G PG  G  G  G                 
Sbjct: 239 CPAGVKGPQGLQGVKGHPGRRGLLGDPGRQGKPGPKGDVGASGEQGIPGPPGPPGIRGYP 298

Query: 153 -IPGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            + G +G+ GP   KG +G  G  G PG+EG RGP      PGR G  G  G  G  G  
Sbjct: 299 GMAGAKGEMGPHGYKGMVGSIGAAGSPGEEGPRGP------PGRAGEKGDVGSQGVQGPQ 352

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           GI G  G  G PG D   GKDG PGT G  G  G  G  GN G  G+ GVPG P  
Sbjct: 353 GITGPKGATGPPGID---GKDGTPGTPGMKGSVGQAGRPGNPGHQGLAGVPGQPGT 405


>gi|332243960|ref|XP_003271138.1| PREDICTED: collagen alpha-1(IX) chain isoform 1 [Nomascus
           leucogenys]
          Length = 678

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 85/195 (43%), Positives = 107/195 (54%), Gaps = 36/195 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKG---------ERGEKG 140
           L  M+G   +  E   PG QG  G++G      E+GA+G  G +G         ++GEKG
Sbjct: 182 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 241

Query: 141 APGVVGPPGPQGIPG---DEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+R      GPKGD G  G +GIPG     GPKGD G P 
Sbjct: 242 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGFP---GPKGDTGLP- 297

Query: 192 RIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G+DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  G
Sbjct: 298 --GMDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 246 PRGNRGKSGINGVPG 260
             GN GK G  G PG
Sbjct: 356 QMGNSGKPGQQGPPG 370



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 84/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA         +GIPG     GPKGD G
Sbjct: 248 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGA---------RGIPGFP---GPKGDTG 295

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 296 LPGMDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 356 QMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPG 397



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 234

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 235 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGFPG 289



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 86/213 (40%), Gaps = 69/213 (32%)

Query: 102 FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            C S    CPPG  G              G+ G RG KGA G +G PG QG  G+EG +G
Sbjct: 167 LCPSA---CPPGRSG------------YPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQG 211

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLD---------- 208
             G++G  GP G  G  G  G  GD G  G  GLDG     GLPG PG            
Sbjct: 212 ELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAG 271

Query: 209 -----------------------GIPGRNGMDGIPGK------------------DGLPG 227
                                  G+PG +G DGIPG                    GLPG
Sbjct: 272 PKGDRGAEGARGIPGFPGPKGDTGLPGMDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPG 331

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             GIPG  G  GEKG TG  G  G+ G +G PG
Sbjct: 332 VPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPG 364



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GP+
Sbjct: 325 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPR 378

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PG+
Sbjct: 379 GLPGSRGELGPVGSPGLPGK 398


>gi|332209569|ref|XP_003253887.1| PREDICTED: collagen alpha-2(V) chain isoform 1 [Nomascus
           leucogenys]
          Length = 1499

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 326

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 387 GEAGPTGARGPEGPQGQRGET 407



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGE 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 88/219 (40%), Gaps = 72/219 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
            G  G+PG   K GP G +G PG  G  G  G+ GE G                      
Sbjct: 356 RGAHGMPG---KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412

Query: 207 -----------LDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
                       DG PG  G  G PG                          G PG  G+
Sbjct: 413 VGSPGLPGAVGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 472

Query: 232 PGTNGTNGEKGMTGPR---------GNRGKSGINGVPGT 261
           PG  G  G KG  GP          G  GK G  G PGT
Sbjct: 473 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT 511



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 272 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 332 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 392 TGARGPEGPQGQRG 405



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  G+ G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGEPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 210 IPGRNG 215
            PG +G
Sbjct: 946 DPGSHG 951


>gi|74181176|dbj|BAE27850.1| unnamed protein product [Mus musculus]
          Length = 1497

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 470 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 520

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 521 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 580

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 581 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPG 637



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 85/189 (44%), Gaps = 18/189 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP--- 154
            M+G    T    P G QG  G+ G  G  G  G+ G  G  G PG  GP G  G     
Sbjct: 382 GMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPP 441

Query: 155 ---------------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                          G +G RG  GD G PG +G  G +G+ GP G  G  G  G +G+ 
Sbjct: 442 GLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKR 501

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G  G+PG  G PG  G  G PG  G PG DG+PG  G  GE+G  G  G +G  G  G P
Sbjct: 502 GPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRP 561

Query: 260 GTPAICAYK 268
           G P +   +
Sbjct: 562 GEPGLPGAR 570



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 88/170 (51%), Gaps = 22/170 (12%)

Query: 128 GEMGVKGERGEKGAPGV---VGP---PGPQGI------PGDEGKRGPKGDMGYPGPQGIP 175
           G  G++G+ G+ G PG     GP   PGP GI      PG+EGKRGP+GD G  GP   P
Sbjct: 457 GPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 513

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 514 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 570

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 571 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 620



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 86/165 (52%), Gaps = 9/165 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGHKG---LEGPKGEIGAPGAKGEAGPTGPMGAMGPL 333

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G  G  G PG  G  GIPG +G  G PG  G  G  
Sbjct: 334 GPRGMPGERGRLGPQ---GAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPT 390

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G  G  G++G TGP G  G  G+ G  GT      K  + S 
Sbjct: 391 GARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSA 435



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 265 GEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPT 324

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 325 GPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 384

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G  GP+G RG++G  G  G+
Sbjct: 385 GEAGPTGARGPEGPQGQRGETGPPGPAGS 413



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 75/161 (46%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  GA G  GP GP G  G  G R
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPR 336

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G+ G  GPQG PG  G  G  G  G  G +G+ G  G PG PG+ G  G  G  G  
Sbjct: 337 GMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPE 396

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G+ G PG  G+ G  G  G  G  G  G  G  GT
Sbjct: 397 GPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGT 437



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 987  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1040

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1041 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGE 1100

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1101 PGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1144



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 745 GPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 804

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 805 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 863

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G +G  G+ G RG +G  G  G PG+
Sbjct: 864 --PGQKGDAGSPGPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGS 911



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 91/189 (48%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 576 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGV 635

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 636 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGV 695

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PGEPG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+GN G +G  G  G 
Sbjct: 696 PGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGP 755

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 756 PGLQGMPGE 764



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 100/238 (42%), Gaps = 69/238 (28%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP G   P G P
Sbjct: 532 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 591

Query: 155 GDEGKRGPKGD---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----- 200
           G++G+ GP G          MG PGP+G  GD GK G  G+ G PG+ G  G+DG     
Sbjct: 592 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPS 651

Query: 201 -------------------------------------------LPGEPGLDGIPGRNGMD 217
                                                      +PGEPG  G  G  G  
Sbjct: 652 GPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGER 711

Query: 218 GIPGK------DGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPAICA 266
           G PG+       GLPG+ G+ G +G +G KG  GP    G+ G  G+ G+PG   I  
Sbjct: 712 GNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAG 769



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 91/179 (50%), Gaps = 30/179 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 294 PGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGK 353

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGL------------------PGEPGL 207
            G  G+PG  G  GP    G  G+PG  G+ G  G                   PG  G 
Sbjct: 354 RGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGS 413

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G DG PG  G  G  G        G  G+ G +G TGP+G RG+SG  GVPG
Sbjct: 414 QGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPG 472



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 88/190 (46%), Gaps = 39/190 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 599 PPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 658

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PG+ G     GP+G+ G PG  G
Sbjct: 659 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERG 718

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
             G  GLPGE G+ G  G +G  G PG  G  G  G PG  G  GE+G+    GP+G+RG
Sbjct: 719 EPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRG 778

Query: 252 KSGINGVPGT 261
             G  G  GT
Sbjct: 779 GIGEKGAEGT 788



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 85/206 (41%), Gaps = 57/206 (27%)

Query: 113 GLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEG------KR 160
           GL+GP G+ G  GAKGE      MG  G  G +G PG  G  GPQG PG  G      K 
Sbjct: 304 GLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKP 363

Query: 161 GPKGDMGYPGPQGIPGDEGKRG------------PKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GP G +G PG  G PG+ G +G            P+G  G  G  G  G  GLPG  G D
Sbjct: 364 GPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTD 423

Query: 209 GIPGRN---------------------------GMDGIPGKDGLPGKDGIPGTNGTNGE- 240
           G PG                             G  GI G+ G PG  G  G  G  GE 
Sbjct: 424 GTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEP 483

Query: 241 -----KGMTGPRGNRGKSGINGVPGT 261
                +G  GP G  GK G  G PGT
Sbjct: 484 GPHGIQGPIGPPGEEGKRGPRGDPGT 509



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 699 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGL 758

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 759 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 818

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 819 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 865



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 85/197 (43%), Gaps = 54/197 (27%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKG---------DMGYP 169
           GE GA G +G +GERG   E+G PG+ G PG +G+ G  G  GPKG         D G P
Sbjct: 697 GEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPP 756

Query: 170 GPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDG-------------------------- 200
           G QG+PG+ G     GPKGD G  G  G +G  G                          
Sbjct: 757 GLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEP 816

Query: 201 ----LPGEPGLDGIPGRNGMDGIPGK---------DGLPGKDGIPGTNGTNGEKGMTGPR 247
               L G PG  G PG  G +G  G          DG PG  G PG  G  G+ G  GP+
Sbjct: 817 GPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQ 876

Query: 248 GNRGKSGINGVPGTPAI 264
           G  G  G +G  G P +
Sbjct: 877 GLAGSPGPHGPHGVPGL 893



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 70/148 (47%), Gaps = 27/148 (18%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           ++G  G PG VGP GP+G  G+ G+RG  G  G PG +G+ G  G  GPKG+ G  G IG
Sbjct: 692 DQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIG 751

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG--------------- 239
                   G PGL G+PG  G+ G PG  G  G  G  G  GT G               
Sbjct: 752 DT------GPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPG 805

Query: 240 ------EKGMTGPRGNRGKSGINGVPGT 261
                 EKG  GPRG  G  G  G PG+
Sbjct: 806 PAGPTGEKGEPGPRGLVGPPGSRGNPGS 833



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 82/205 (40%), Gaps = 48/205 (23%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 210 PGSVGPVGPRGPQGLQGQQGGVGPAGPPGEPGEPGPMGPIGSRGPEGPPGKPGEDGEPGR 269

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 270 NGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGA 329

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 330 MGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 389

Query: 244 TGPRGNRGKSGINGVPGTPAICAYK 268
           TG RG  G  G  G  G P     +
Sbjct: 390 TGARGPEGPQGQRGETGPPGPAGSQ 414



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 54/104 (51%), Gaps = 6/104 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 814 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 873

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           GPQG+    G  GP G  G PG  G  G  G PG  G  G  GR
Sbjct: 874 GPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGSAGR 914



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 65/140 (46%), Gaps = 39/140 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G  G  G  G +G +G+RG+         PGP G+PG +G        G PGP
Sbjct: 1044 PGPEGPAGNDGTPGRDGAVGERGDRGD---------PGPAGLPGSQGA------PGTPGP 1088

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PGD G+R                  G PG  G  G PGR       GK GLPG  G 
Sbjct: 1089 VGAPGDAGQR------------------GEPGSRGPVGPPGRA------GKRGLPGPQGP 1124

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G NG++G  G +G+RG
Sbjct: 1125 RGDKGDNGDRGDRGQKGHRG 1144



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  G+ G RGP G  G  G 
Sbjct: 1056 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGEPGSRGPVGPPGRAGK 1115

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1116 RGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1145



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 81/198 (40%), Gaps = 63/198 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 824  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 883

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 884  PHGPHGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPAGEPGKEGPPGLRG 943

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 944  DPGSHGRVGDRGPAGPPGSPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1003

Query: 228  KDGIPGTNGTNGEKGMTG 245
              G+PG  GT G+ G TG
Sbjct: 1004 MPGLPGPAGTPGKVGPTG 1021



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 87/233 (37%), Gaps = 84/233 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP G  G  G +G +G  G PG  
Sbjct: 847  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHGVPGLKGGRGTQGPPGAT 906

Query: 173  GIPGDEG---------------------KRGP---KGDMGYPGRI--------------- 193
            G PG  G                     K GP   +GD G  GR+               
Sbjct: 907  GFPGSAGRVGPPGPAGAPGPAGPAGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGSPGDK 966

Query: 194  GLDGRD---------------------GLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
            G  G D                     G+PG+ G  G+PG  G  G PGK G        
Sbjct: 967  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 1026

Query: 226  -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                             PG +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 1027 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1079


>gi|74208774|dbj|BAE21154.1| unnamed protein product [Mus musculus]
          Length = 1497

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 470 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 520

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 521 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 580

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 581 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPG 637



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 85/189 (44%), Gaps = 18/189 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP--- 154
            M+G    T    P G QG  G+ G  G  G  G+ G  G  G PG  GP G  G     
Sbjct: 382 GMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPP 441

Query: 155 ---------------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                          G +G RG  GD G PG +G  G +G+ GP G  G  G  G +G+ 
Sbjct: 442 GLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKR 501

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G  G+PG  G PG  G  G PG  G PG DG+PG  G  GE+G  G  G +G  G  G P
Sbjct: 502 GPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRP 561

Query: 260 GTPAICAYK 268
           G P +   +
Sbjct: 562 GEPGLPGAR 570



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 88/170 (51%), Gaps = 22/170 (12%)

Query: 128 GEMGVKGERGEKGAPGV---VGP---PGPQGI------PGDEGKRGPKGDMGYPGPQGIP 175
           G  G++G+ G+ G PG     GP   PGP GI      PG+EGKRGP+GD G  GP   P
Sbjct: 457 GPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 513

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 514 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 570

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 571 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 620



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 86/165 (52%), Gaps = 9/165 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGHKG---LEGPKGEIGAPGAKGEAGPTGPMGAMGPL 333

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G  G  G PG  G  GIPG +G  G PG  G  G  
Sbjct: 334 GPRGMPGERGRLGPQ---GAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPT 390

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G  G  G++G TGP G  G  G+ G  GT      K  + S 
Sbjct: 391 GARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSA 435



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 265 GEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPT 324

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 325 GPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 384

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G  GP+G RG++G  G  G+
Sbjct: 385 GEAGPTGARGPEGPQGQRGETGPPGPAGS 413



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 77/160 (48%), Gaps = 9/160 (5%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  GA G  GP GP G  G  G R
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPR 336

Query: 161 GPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G+ G  GPQG PG        GK GP G +G PG  G  G  G+ GE G  G  G  
Sbjct: 337 GMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPE 396

Query: 215 GMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRG 251
           G  G  G+ G P   G  G+PG  GT+G  G  GP G+ G
Sbjct: 397 GPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAG 436



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 745 GPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 804

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 805 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 863

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G +G  G+ G RG +G  G  G PG+
Sbjct: 864 --PGQKGDAGSPGPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGS 911



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 91/189 (48%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 576 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGV 635

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 636 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGV 695

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PGEPG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+GN G +G  G  G 
Sbjct: 696 PGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGP 755

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 756 PGLQGMPGE 764



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 100/238 (42%), Gaps = 69/238 (28%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP G   P G P
Sbjct: 532 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 591

Query: 155 GDEGKRGPKGD---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----- 200
           G++G+ GP G          MG PGP+G  GD GK G  G+ G PG+ G  G+DG     
Sbjct: 592 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPS 651

Query: 201 -------------------------------------------LPGEPGLDGIPGRNGMD 217
                                                      +PGEPG  G  G  G  
Sbjct: 652 GPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGER 711

Query: 218 GIPGK------DGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPAICA 266
           G PG+       GLPG+ G+ G +G +G KG  GP    G+ G  G+ G+PG   I  
Sbjct: 712 GNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAG 769



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 91/179 (50%), Gaps = 30/179 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 294 PGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGK 353

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGL------------------PGEPGL 207
            G  G+PG  G  GP    G  G+PG  G+ G  G                   PG  G 
Sbjct: 354 RGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGS 413

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G DG PG  G  G  G        G  G+ G +G TGP+G RG+SG  GVPG
Sbjct: 414 QGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPG 472



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 987  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1040

Query: 166  MGYPGPQGIPGDEGKRG------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+G  G++G  G       +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1041 VGEPGPEGPAGNDGTPGRDGAVVERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGE 1100

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1101 PGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1144



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 79/179 (44%), Gaps = 36/179 (20%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------EGKRGPKGDM 166
           GP G  GE G  G  G  G+RG  G PG  GP GP GIPG          +G+ GP G  
Sbjct: 334 GPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGAR 393

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG----------------------- 203
           G  GPQG  G+ G  GP G  G PG +G DG  G  G                       
Sbjct: 394 GPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQ 453

Query: 204 -EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  GI G++G  G+PG  G  G  G PG +G    +G  GP G  GK G  G PGT
Sbjct: 454 GSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGI---QGPIGPPGEEGKRGPRGDPGT 509



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 88/190 (46%), Gaps = 39/190 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 599 PPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 658

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PG+ G     GP+G+ G PG  G
Sbjct: 659 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERG 718

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
             G  GLPGE G+ G  G +G  G PG  G  G  G PG  G  GE+G+    GP+G+RG
Sbjct: 719 EPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRG 778

Query: 252 KSGINGVPGT 261
             G  G  GT
Sbjct: 779 GIGEKGAEGT 788



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 699 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGL 758

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 759 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 818

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 819 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 865



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 82/187 (43%), Gaps = 48/187 (25%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKG---------DMGYP 169
           GE GA G +G +GERG   E+G PG+ G PG +G+ G  G  GPKG         D G P
Sbjct: 697 GEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPP 756

Query: 170 GPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDG-------------------------- 200
           G QG+PG+ G     GPKGD G  G  G +G  G                          
Sbjct: 757 GLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEP 816

Query: 201 ----LPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               L G PG  G PG  G +G  G  G     G DG PG  G  GE G  G  G+ G  
Sbjct: 817 GPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQ 876

Query: 254 GINGVPG 260
           G+ G PG
Sbjct: 877 GLAGSPG 883



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 70/148 (47%), Gaps = 27/148 (18%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           ++G  G PG VGP GP+G  G+ G+RG  G  G PG +G+ G  G  GPKG+ G  G IG
Sbjct: 692 DQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIG 751

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG--------------- 239
                   G PGL G+PG  G+ G PG  G  G  G  G  GT G               
Sbjct: 752 DT------GPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPG 805

Query: 240 ------EKGMTGPRGNRGKSGINGVPGT 261
                 EKG  GPRG  G  G  G PG+
Sbjct: 806 PAGPTGEKGEPGPRGLVGPPGSRGNPGS 833



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 82/205 (40%), Gaps = 48/205 (23%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 210 PGSVGPVGPRGPQGLQGQQGGVGPAGPPGEPGEPGPMGPIGSRGPEGPPGKPGEDGEPGR 269

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 270 NGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGA 329

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 330 MGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 389

Query: 244 TGPRGNRGKSGINGVPGTPAICAYK 268
           TG RG  G  G  G  G P     +
Sbjct: 390 TGARGPEGPQGQRGETGPPGPAGSQ 414



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 21/117 (17%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------G 173
           +KGE G +               G+VGPPG +G PG  G+ GP G +G+ GPQ      G
Sbjct: 812 EKGEPGPR---------------GLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPG 856

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           + G+ G+ G KGD G PG  GL G  G  G  G+ G+ G  G  G PG  G PG  G
Sbjct: 857 VKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGSAG 913



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 87/186 (46%), Gaps = 36/186 (19%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 824  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 883

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---------------------PGEPGLDG 209
            P G  G  G +G +G  G PG  G  G  G                       G PGL G
Sbjct: 884  PHGPHGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPAGEPGKEGPPGLRG 943

Query: 210  IPGRNGM---------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             PG +G                 G PG+DG PG DG PG  GT G++G+ G  G RG+ G
Sbjct: 944  DPGSHGRVGDRGPAGPPGSPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1003

Query: 255  INGVPG 260
            + G+PG
Sbjct: 1004 MPGLPG 1009



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 64/140 (45%), Gaps = 39/140 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G  G  G  G +  +G+RG+         PGP G+PG +G        G PGP
Sbjct: 1044 PGPEGPAGNDGTPGRDGAVVERGDRGD---------PGPAGLPGSQGA------PGTPGP 1088

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PGD G+R                  G PG  G  G PGR       GK GLPG  G 
Sbjct: 1089 VGAPGDAGQR------------------GEPGSRGPVGPPGRA------GKRGLPGPQGP 1124

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G NG++G  G +G+RG
Sbjct: 1125 RGDKGDNGDRGDRGQKGHRG 1144



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 49/90 (54%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G + ++G+ G  G  G+ G +G  G PG VG PG  G  G+ G RGP G  G  G 
Sbjct: 1056 PGRDGAVVERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGEPGSRGPVGPPGRAGK 1115

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1116 RGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1145


>gi|47229883|emb|CAG07079.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1208

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 6/140 (4%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP+G KG  G  G  G KGE G KG  G  G  GP G  G+EGKRGP+G+ G  GP G P
Sbjct: 489 GPLGPKGTSGDPGIPGFKGEAGPKGEIGPAGLQGPPGQQGEEGKRGPRGEPGAAGPLGPP 548

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+   RG  G+ G+PG+ GL G  G PGE G  G  G  G +G PG+   PG+ G+PG  
Sbjct: 549 GE---RGAPGNRGFPGQDGLAGSKGAPGERGPSGASGPKGANGDPGR---PGESGLPGAR 602

Query: 236 GTNGEKGMTGPRGNRGKSGI 255
           G  G  G  GP+G  G SG 
Sbjct: 603 GLTGRPGDAGPQGKVGPSGA 622



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 91/180 (50%), Gaps = 21/180 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P GLQGP GQ      +GE G +G RGE GA G +GPPG +G PG
Sbjct: 502 IPGFKGEAGPKGEIGPAGLQGPPGQ------QGEEGKRGPRGEPGAAGPLGPPGERGAPG 555

Query: 156 DE---GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           +    G+ G  G  G PG +G  G  G +G  GD G PG  GL G  GL G PG  G  G
Sbjct: 556 NRGFPGQDGLAGSKGAPGERGPSGASGPKGANGDPGRPGESGLPGARGLTGRPGDAGPQG 615

Query: 213 RNGMDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G  G PG+D            G PG  G PG  G +GE G +G +G  G  G+ G+PG
Sbjct: 616 KVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGASGEPGKSGEKGLAGAPGLRGLPG 675



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 83/176 (47%), Gaps = 18/176 (10%)

Query: 100 QGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           +GF        P GLQGP    G  G  G KG +G  G  G +G PG+ G PG +G  G 
Sbjct: 743 RGFPGERGAAGPQGLQGPRGLPGTPGTDGPKGAIGPHGSLGAQGPPGLQGMPGERGGAGI 802

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDGL 201
            G +G +GD+G  GP+G PG +G RG                KG+ G  G  G  G  G 
Sbjct: 803 PGPKGDRGDIGEKGPEGAPGKDGARGLTGPIGPPGPSGPNGEKGETGPAGPSGAPGTRGT 862

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PG+ G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 863 PGDRGETGSPGPAGFAGPPGADGQPGIKGEQGETGQKGDAGAPGPQGPSGAPGPAG 918



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 91/235 (38%), Gaps = 72/235 (30%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P G  GP G  G+ G  GE G+ G RG  G PG  GP   QG  G  
Sbjct: 564 GLAGSKGAPGERGPSGASGPKGANGDPGRPGESGLPGARGLTGRPGDAGP---QGKVGPS 620

Query: 158 GK---------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--- 199
           G                RG  G MG+PGP+G  G+ GK G KG  G PG  GL G+D   
Sbjct: 621 GAPGEDGRPGPPGPQGARGQPGVMGFPGPKGASGEPGKSGEKGLAGAPGLRGLPGKDGET 680

Query: 200 ---------------------------------------------GLPGEPGLDGIPGRN 214
                                                        G+PGE G  G  G  
Sbjct: 681 GAAGPPGPAGPAGERGEQGQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGASGTTGPR 740

Query: 215 GMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G PG+       GL G  G+PGT GT+G KG  GP G+ G  G  G+ G P 
Sbjct: 741 GERGFPGERGAAGPQGLQGPRGLPGTPGTDGPKGAIGPHGSLGAQGPPGLQGMPG 795



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 90/214 (42%), Gaps = 39/214 (18%)

Query: 83  NPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG-------- 134
            P   L A     L  M G         P G +G IG+KG  GA G+ G +G        
Sbjct: 777 GPHGSLGAQGPPGLQGMPGERGGAGIPGPKGDRGDIGEKGPEGAPGKDGARGLTGPIGPP 836

Query: 135 -------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGDEGKR 181
                  E+GE G  G  G PG +G PGD G+ G  G  G+ GP       GI G++G+ 
Sbjct: 837 GPSGPNGEKGETGPAGPSGAPGTRGTPGDRGETGSPGPAGFAGPPGADGQPGIKGEQGET 896

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG----------- 230
           G KGD G PG  G  G  G  G  G+ G  G  G  G PG  G PG  G           
Sbjct: 897 GQKGDAGAPGPQGPSGAPGPAGPTGVFGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNP 956

Query: 231 -------IPGTNGTNGEKGMTGPRGNRGKSGING 257
                   PG +G  G +G  GP G +G +G+ G
Sbjct: 957 GPAGPAGSPGKDGPKGIRGDAGPPGRQGDAGLRG 990



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 75/160 (46%), Gaps = 48/160 (30%)

Query: 131 GVKGERGEKGAPGVV------------------GPPGPQG------IPGDEGKRGPKGDM 166
           G+ G +G  GAPG+                   GP GP+G      IPG +G+ GPKG++
Sbjct: 456 GIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIPGFKGEAGPKGEI 515

Query: 167 GYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G QG PG   +EGKRGP+G                  EPG  G  G  G  G PG  
Sbjct: 516 GPAGLQGPPGQQGEEGKRGPRG------------------EPGAAGPLGPPGERGAPGNR 557

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G PG+DG+ G+ G  GE+   GP G  G  G NG PG P 
Sbjct: 558 GFPGQDGLAGSKGAPGER---GPSGASGPKGANGDPGRPG 594



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 86/191 (45%), Gaps = 51/191 (26%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+             G +G+ 
Sbjct: 639 GQPGVMGFPGPKGASGEPGKSGEKGLAGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQ 698

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QG+PG+ G  G   P+G+ G+PG        GL 
Sbjct: 699 GQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGASGTTGPRGERGFPGERGAAGPQGLQ 758

Query: 197 GRDGLPGEPGLDGIPG------RNGMDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPR 247
           G  GLPG PG DG  G        G  G PG  G+PG+    GIPG  G  G+ G  GP 
Sbjct: 759 GPRGLPGTPGTDGPKGAIGPHGSLGAQGPPGLQGMPGERGGAGIPGPKGDRGDIGEKGPE 818

Query: 248 GNRGKSGINGV 258
           G  GK G  G+
Sbjct: 819 GAPGKDGARGL 829



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 72/165 (43%), Gaps = 33/165 (20%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------- 152
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG  G       
Sbjct: 893  QGETGQKGDAGAPGPQGPSGAPGPAGPTGVFGPKGARGAQGPPGATGFPGAAGRVGPPGP 952

Query: 153  -----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD----- 196
                        PG +G +G +GD G PG Q   GD G RGP G  G  G  G D     
Sbjct: 953  NGNPGPAGPAGSPGKDGPKGIRGDAGPPGRQ---GDAGLRGPAGPSGEKGDAGEDGPVGP 1009

Query: 197  ----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
                G  GL G+ G+ G+PG+ G  G P   GLPG  G PG  G 
Sbjct: 1010 PGPSGPQGLAGQRGIVGLPGQRGERGFP---GLPGPSGEPGKQGA 1051



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 81/185 (43%), Gaps = 45/185 (24%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKR 160
              T    P G  GP G  G+ G KGE G  G++G+ GAPG  GP   PGP G  G  G +
Sbjct: 867  GETGSPGPAGFAGPPGADGQPGIKGEQGETGQKGDAGAPGPQGPSGAPGPAGPTGVFGPK 926

Query: 161  GPKGDMGYPGPQGIPGDE---------------------GKRGPK---GDMGYPGR---I 193
            G +G  G PG  G PG                       GK GPK   GD G PGR    
Sbjct: 927  GARGAQGPPGATGFPGAAGRVGPPGPNGNPGPAGPAGSPGKDGPKGIRGDAGPPGRQGDA 986

Query: 194  GLDGRDGLPGEPGLDG---------------IPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            GL G  G  GE G  G               + G+ G+ G+PG+ G  G  G+PG +G  
Sbjct: 987  GLRGPAGPSGEKGDAGEDGPVGPPGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEP 1046

Query: 239  GEKGM 243
            G++G 
Sbjct: 1047 GKQGA 1051



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 77/201 (38%), Gaps = 59/201 (29%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           GE G  G+ GE+G     GP G +G PG  G  G KG  GYPG  G  G+ G  G KG+ 
Sbjct: 201 GEAGKPGKSGERG---PTGPQGARGFPGTPGLPGIKGHRGYPGLDGAKGETGAVGSKGES 257

Query: 188 GYPGRIG-----------------------------------------LDGRDGLPGEPG 206
           G PG  G                                         + G  GLPGE  
Sbjct: 258 GAPGENGAPGPLVSNASPCCIHMENLICCWSLHQSPGNDSNMFSSVALVQGPRGLPGE-- 315

Query: 207 LDGIPGRNGMDGIPGKDGL------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G PG +G+ G  G DGL             G  G PG+ G  GE G TG RG  G  G
Sbjct: 316 -RGRPGPSGVAGARGNDGLSGPAGPPGPVGPSGAPGFPGSPGAKGEAGPTGARGPEGAQG 374

Query: 255 INGVPGTPAICAYKRESCSLL 275
             G  GTP        S S+L
Sbjct: 375 PRGESGTPGSSGPSGASVSIL 395


>gi|161484654|ref|NP_034061.2| collagen alpha-1(IV) chain precursor [Mus musculus]
 gi|126302535|sp|P02463.4|CO4A1_MOUSE RecName: Full=Collagen alpha-1(IV) chain; Contains: RecName:
            Full=Arresten; Flags: Precursor
 gi|74181102|dbj|BAE27820.1| unnamed protein product [Mus musculus]
 gi|74181221|dbj|BAE27863.1| unnamed protein product [Mus musculus]
 gi|74188621|dbj|BAE28055.1| unnamed protein product [Mus musculus]
          Length = 1669

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 104/202 (51%), Gaps = 34/202 (16%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQG-- 152
            V   G   S  E   PG+ G    +G  G+ GE G KGE+G+ G PG+   G PG +G  
Sbjct: 1013 VGGMGLPGSPGEKGVPGIPG---SQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQ 1069

Query: 153  ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                 PG  G++G KG  G PG   +PG  G RG  G++G+PG  GL G  G  G PGLD
Sbjct: 1070 GLAGFPGSPGEKGEKGSAGTPG---MPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLD 1126

Query: 209  GIPGRNGMDGIPG---------KDGLPGKDGIPGTNGTNGEKGMT-----------GPRG 248
            G+PG  G  G+PG         + G PG DGIPG+ G  GE+G+            G +G
Sbjct: 1127 GVPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFPGFPGSKGDKG 1186

Query: 249  NRGKSGINGVPGTPAICAYKRE 270
            ++G+ G  G+ G+P I   K E
Sbjct: 1187 SKGEVGFPGLAGSPGIPGVKGE 1208



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 86/154 (55%), Gaps = 13/154 (8%)

Query: 119  GQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GQKG+ G KG++G    KG RG+ G PGV   PG  G  G  G+ GPKGD G  G  G P
Sbjct: 948  GQKGDQGEKGQIGPTGDKGSRGDPGTPGV---PGKDGQAGHPGQPGPKGDPGLSGTPGSP 1004

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            G  G +G  G MG PG  G  G  G+PG  G+ G PG  G  G  G+ GLPG  GIPG  
Sbjct: 1005 GLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGI-GIPGRP 1063

Query: 236  GTNGEKGMT------GPRGNRGKSGINGVPGTPA 263
            G  G++G+       G +G +G +G  G+PG+P 
Sbjct: 1064 GDKGDQGLAGFPGSPGEKGEKGSAGTPGMPGSPG 1097



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 91/164 (55%), Gaps = 18/164 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGY 168
            PG QG  G  G  G+KGEMGV G  G+ G+PG  G PG  G  GD G     GP+GD G+
Sbjct: 863  PGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGF 922

Query: 169  PGPQG---IPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G +G   +PG  G          +G KGD G  G+IG  G  G  G+PG  G+PG++G 
Sbjct: 923  KGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQ 982

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 983  AGHPGQ---PGPKGDPGLSGTPGSPGLPGPKGSVGGMGLPGSPG 1023



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GP G KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 960  GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGPKGSVGGMGLP 1019

Query: 167  ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
                     G PG QG+PG  G++G KG+        +G PGR G  G  GL G PG  G
Sbjct: 1020 GSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPG 1079

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G PG  G PG  G PG  G  G  G+ G +G++G  G++GVPG
Sbjct: 1080 EKGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLDGVPG 1130



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 75/137 (54%), Gaps = 16/137 (11%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD--MGYPGRIGLDGRDGL 201
           + GPPG  G+PG  G  GP+GD G+PG  G PG  G++G  G   +G+PG  G  G DGL
Sbjct: 644 LPGPPGAAGLPGSPGFPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGL 703

Query: 202 PGEPGLDGIPGRNGMDGIPGK--------------DGLPGKDGIPGTNGTNGEKGMTGPR 247
           PGE G  G PGR G +G+PG                GL G+ G+PG  GT GEKG  G  
Sbjct: 704 PGEIGRPGSPGRPGFNGLPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGP 763

Query: 248 GNRGKSGINGVPGTPAI 264
           G  G+ G+ G PG   I
Sbjct: 764 GVPGEQGLTGPPGLQGI 780



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 84/175 (48%), Gaps = 23/175 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------- 155
            PG  GP G  G  G KG+ G+ G  G +G PG  G  G  G+PG                
Sbjct: 890  PGSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQ 949

Query: 156  --DEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
              D+G++G   P GD G  G  G PG  GK G  G  G PG  G  G  G PG PGL G 
Sbjct: 950  KGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGP 1009

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN--GVPGTPA 263
             G  G  G+PG  G  G  GIPG+ G  G  G  G +G +G+SG+   G+PG P 
Sbjct: 1010 KGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPG 1064



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 72/148 (48%), Gaps = 24/148 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G KG++G +G PG+ G  G  G+PG +G          PG  G PG +G+ G  G  G P
Sbjct: 840 GPKGDKGSQGLPGLTGQSGLPGLPGQQG---------TPGVPGFPGSKGEMGVMGTPGQP 890

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT------------- 237
           G  G  G  GLPGE G  G+PG +G  G PG  G  G  G+PG  G+             
Sbjct: 891 GSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQK 950

Query: 238 --NGEKGMTGPRGNRGKSGINGVPGTPA 263
              GEKG  GP G++G  G  G PG P 
Sbjct: 951 GDQGEKGQIGPTGDKGSRGDPGTPGVPG 978



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 87/207 (42%), Gaps = 65/207 (31%)

Query: 112 PGLQGPIGQKGEIG-----AKGEMGVKG------ERGEKGAPGV------VGPPGPQGIP 154
           PG  GP GQKGE G      KG+ G+ G      E+G  G PGV       GPPG QGI 
Sbjct: 722 PGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGIR 781

Query: 155 GDEGKRGP-----------------------------------KGDMGYPGPQGIPGDEG 179
           GD G  G                                    KG+ G+P   G PG + 
Sbjct: 782 GDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFP---GFPGLD- 837

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------GRNGMDGIPGKDGLPGKDG 230
             GPKGD G  G  GL G+ GLPG PG  G P         G  G+ G PG+ G PG  G
Sbjct: 838 MPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAG 897

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  G  G+ G+ G  G RG  G  G
Sbjct: 898 TPGLPGEKGDHGLPGSSGPRGDPGFKG 924



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 82/195 (42%), Gaps = 50/195 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G  G KGE G+       G PG+ G PG  GIPG  G++G  G  G PG 
Sbjct: 716 PGFNGLPGNPGPQGQKGEPGI-------GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGE 768

Query: 172 QGIPGDEGKRGPKGDMGYPG--------------------------------RIGLDGRD 199
           QG+ G  G +G +GD G PG                                  G+ G  
Sbjct: 769 QGLTGPPGLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEK 828

Query: 200 GLPGEPGLD-----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           G PG PGLD           G+PG  G  G+PG  G  G  G+PG  G+ GE G+ G  G
Sbjct: 829 GFPGFPGLDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPG 888

Query: 249 NRGKSGINGVPGTPA 263
             G  G  G PG P 
Sbjct: 889 QPGSPGPAGTPGLPG 903



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 93/225 (41%), Gaps = 67/225 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--PGPQGIPGDEGKRGPKGDMGYP 169
           PG  GP G +G  G  G  G+ GE+G  G PG+  P  PGP+G+ G  G+ G  G  G P
Sbjct: 657 PGFPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGLPGEIGRPGSPGRP 716

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------IPGRNGMDGIP 220
           G  G+PG+ G +G KG+ G  G  GL G+ GLPG PG  G         +PG  G+ G P
Sbjct: 717 GFNGLPGNPGPQGQKGEPGI-GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPP 775

Query: 221 GKDGLPGKDGIPGTNGT--------------------------------NGEKG------ 242
           G  G+ G  G PG  G                                  GEKG      
Sbjct: 776 GLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFPGFPG 835

Query: 243 --MTGPRGNRGKSGI---------------NGVPGTPAICAYKRE 270
             M GP+G++G  G+                G PG P     K E
Sbjct: 836 LDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGE 880



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 75/157 (47%), Gaps = 38/157 (24%)

Query: 127 KGEMG--VKGERGEKGAPGVVGPPGPQGIPGDE-----------GKRGPKGDMGYPGPQG 173
           KG+MG   +G +G+KG  GV GPPG   +PG             G++G KG+ G+PG   
Sbjct: 217 KGQMGSSFQGPKGDKGEQGVSGPPG---VPGQAQVKEKGDFAPTGEKGQKGEPGFPG--- 270

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
           +PG        G+ G PG+ G  G+      PG DG  G  G  GIPG  G PG  G  G
Sbjct: 271 VPG-------YGEKGEPGKQGPRGK------PGKDGEKGERGSPGIPGDSGYPGLPGRQG 317

Query: 234 TNGTNGEKGMTGPRGN------RGKSGINGVPGTPAI 264
             G  GE G+ GP G        G+ G  G PG P +
Sbjct: 318 PQGEKGEAGLPGPPGTVIGTMPLGEKGDRGYPGAPGL 354



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 50/82 (60%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G+ G +G+ G  GE+GE+G+PG+ G  G  G+PG +G +G KG+ G PGP G     
Sbjct: 278 GEPGKQGPRGKPGKDGEKGERGSPGIPGDSGYPGLPGRQGPQGEKGEAGLPGPPGTVIGT 337

Query: 179 GKRGPKGDMGYPGRIGLDGRDG 200
              G KGD GYPG  GL G  G
Sbjct: 338 MPLGEKGDRGYPGAPGLRGEPG 359



 Score = 45.8 bits (107), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 60/123 (48%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           EIG  G+ G KG+RG               +PG +G  G       PGPQG PG  G+ G
Sbjct: 487 EIGFPGQPGAKGDRG---------------LPGRDGLEG------LPGPQGSPGLIGQPG 525

Query: 183 PKGDMGYPGRIGLD----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            KG+   PG I  D    G  G PG PG  G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 526 AKGE---PGEIFFDMRLKGDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGLK 582

Query: 239 GEK 241
           GE+
Sbjct: 583 GER 585



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 85/196 (43%), Gaps = 69/196 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG  GP GQKGE G+ G  G  GE+GE+G PG   P    G PG +G +G KG++G+PG 
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFP----GFPGSKGDKGSKGEVGFPGL 1196

Query: 171  --PQGIPGDEGKRG-----------------------PKGDMGYP--------------- 190
                GIPG +G++G                       PKGD G                 
Sbjct: 1197 AGSPGIPGVKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPP 1256

Query: 191  ------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                  G  G  G  G PG PG            +PG  G PG  G+PG  G+    G+T
Sbjct: 1257 GFPGINGPKGDKGNQGWPGAPG------------VPGPKGDPGFQGMPGIGGS---PGIT 1301

Query: 245  GPRGNRGKSGINGVPG 260
               G++G  G+ GVPG
Sbjct: 1302 ---GSKGDMGLPGVPG 1314


>gi|324500170|gb|ADY40089.1| Collagen alpha-2(IV) chain [Ascaris suum]
          Length = 1763

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 92/170 (54%), Gaps = 26/170 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G  G++GA G   ++GE+G+ G PG+ G  G  G+PG       KG+ G+PG 
Sbjct: 1144 PGLVGPPGLPGKMGAPG---IRGEKGDAGLPGLPGERGLDGLPGQ------KGEAGFPGA 1194

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+PG     GPKG  G PG  GL G  GLPG   L+G PG  GM G  G  G PG+DG+
Sbjct: 1195 PGLPG---PVGPKGSAGAPGFPGLKGEPGLPG---LEGQPGPRGMKGEAGLPGAPGRDGL 1248

Query: 232  PGTNGTNGEKGM-----------TGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G  GE G+           TGP+GN G  G+ G  G P +   K E
Sbjct: 1249 PGLPGMKGEAGLPGLPGQPGKSITGPKGNAGLPGLPGKDGLPGLPGLKGE 1298



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/190 (41%), Positives = 92/190 (48%), Gaps = 23/190 (12%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            GF        PPGL G +G  G  G KG+ G+ G  GE+G  G+ G  G  G PG  G  
Sbjct: 1139 GFPGQPGLVGPPGLPGKMGAPGIRGEKGDAGLPGLPGERGLDGLPGQKGEAGFPGAPGLP 1198

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD--- 217
            GP G  G  G  G PG +G+ G  G  G PG  G+ G  GLPG PG DG+PG  GM    
Sbjct: 1199 GPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEAGLPGAPGRDGLPGLPGMKGEA 1258

Query: 218  ---GIPGK--------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G+PG+               GLPGKDG+PG  G  GE G     G  G +GI G PG
Sbjct: 1259 GLPGLPGQPGKSITGPKGNAGLPGLPGKDGLPGLPGLKGEPGKP---GYAGAAGIKGEPG 1315

Query: 261  TPAICAYKRE 270
             P I   K E
Sbjct: 1316 LPGIPGAKGE 1325



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 93/178 (52%), Gaps = 27/178 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G KG  GA G  G+KGE G  GAPG+ G  G  G+PG +G+ G  G  G  GP
Sbjct: 1090 PGRPGAPGPKGLDGAPGFPGLKGEAGLPGAPGLPGQDGLPGLPGQKGESGFPGQPGLVGP 1149

Query: 172  QGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP-- 226
             G+PG  G    RG KGD G P         GLPGE GLDG+PG+ G  G PG  GLP  
Sbjct: 1150 PGLPGKMGAPGIRGEKGDAGLP---------GLPGERGLDGLPGQKGEAGFPGAPGLPGP 1200

Query: 227  ----GKDGIPGTNGTNGEKGM------TGPRGNRGKSGINGVP---GTPAICAYKRES 271
                G  G PG  G  GE G+       GPRG +G++G+ G P   G P +   K E+
Sbjct: 1201 VGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEAGLPGAPGRDGLPGLPGMKGEA 1258



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 88/165 (53%), Gaps = 18/165 (10%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG-- 182
            GA G MG KG  G  G PG  G PGP+G+ G  G  G KG+ G PG  G+PG +G  G  
Sbjct: 1073 GAPGLMGEKGLPGLPGKPGRPGAPGPKGLDGAPGFPGLKGEAGLPGAPGLPGQDGLPGLP 1132

Query: 183  -PKGDMGYPGRIGLDGRDGLPG------------EPGLDGIPGRNGMDGIPGKD---GLP 226
              KG+ G+PG+ GL G  GLPG            + GL G+PG  G+DG+PG+    G P
Sbjct: 1133 GQKGESGFPGQPGLVGPPGLPGKMGAPGIRGEKGDAGLPGLPGERGLDGLPGQKGEAGFP 1192

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  G+PG  G  G  G  G  G +G+ G+ G+ G P     K E+
Sbjct: 1193 GAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEA 1237



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/141 (48%), Positives = 78/141 (55%), Gaps = 6/141 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G+ G+ G  G  G+KGE G  G PG  G PG  GIPG   KRG  G  G PGP
Sbjct: 1290 PGLPGLKGEPGKPGYAGAAGIKGEPGLPGIPGAKGEPGLSGIPG---KRGNDGIPGKPGP 1346

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+PG  G +G  G  G  G  GL G  GL GEPGL G PG+ G  G PG+ G+P   G+
Sbjct: 1347 AGLPGLPGMKGESGLPGPQGPAGLPGLPGLKGEPGLPGFPGQKGETGFPGQPGIP---GL 1403

Query: 232  PGTNGTNGEKGMTGPRGNRGK 252
            PG  G +G  G  G  G  GK
Sbjct: 1404 PGMKGDSGYPGAPGRDGAPGK 1424



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 96/216 (44%), Gaps = 56/216 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE------------RGEKGAPGVVGPPGPQGIPGDEGK 159
            PGL GP+G KG  GA G  G+KGE            RG KG  G+ G PG  G+PG  G 
Sbjct: 1195 PGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEAGLPGAPGRDGLPGLPGM 1254

Query: 160  RG-----------------PKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGR- 198
            +G                 PKG+ G PG     G+PG  G +G  G  GY G  G+ G  
Sbjct: 1255 KGEAGLPGLPGQPGKSITGPKGNAGLPGLPGKDGLPGLPGLKGEPGKPGYAGAAGIKGEP 1314

Query: 199  -----------------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                                   DG+PG+PG  G+PG  GM G  G  G  G  G+PG  
Sbjct: 1315 GLPGIPGAKGEPGLSGIPGKRGNDGIPGKPGPAGLPGLPGMKGESGLPGPQGPAGLPGLP 1374

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  GE G+ G  G +G++G  G PG P +   K +S
Sbjct: 1375 GLKGEPGLPGFPGQKGETGFPGQPGIPGLPGMKGDS 1410



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 90/181 (49%), Gaps = 32/181 (17%)

Query: 119  GQKGEIGAKGEMGV---------------KGERGEK--GAPGVVGPPGPQGIPGDEGKRG 161
            G+KGE G  G+ G+               KG+ G+   GAPG++G  G  G+PG  G+  
Sbjct: 1035 GEKGEPGLPGQPGLRGPQGPPGLPGLPGLKGDEGQPGYGAPGLMGEKGLPGLPGKPGRP- 1093

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                 G PGP+G+ G  G  G KG+ G PG  GL G+DGLPG PG  G  G  G  G+ G
Sbjct: 1094 -----GAPGPKGLDGAPGFPGLKGEAGLPGAPGLPGQDGLPGLPGQKGESGFPGQPGLVG 1148

Query: 222  KDGLPGKDGIPGTNGTN---------GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
              GLPGK G PG  G           GE+G+ G  G +G++G  G PG P     K  + 
Sbjct: 1149 PPGLPGKMGAPGIRGEKGDAGLPGLPGERGLDGLPGQKGEAGFPGAPGLPGPVGPKGSAG 1208

Query: 273  S 273
            +
Sbjct: 1209 A 1209



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 68/136 (50%), Gaps = 29/136 (21%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GPPG  G+P   G  GPKG+ G+PG  G+         +G  G PG  G+ G  GLPG P
Sbjct: 727 GPPGKDGLP---GLPGPKGEAGFPGAPGL---------QGPAGLPGLPGMKGNPGLPGAP 774

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---------------- 249
           GL G+PG  G  GI GK GLPG  G  G  G  G+ G+ GP+G                 
Sbjct: 775 GLAGLPGIPGEKGIAGKPGLPGLTGAKGEAGYPGQPGLPGPKGEPGPSTTGPPGPPGFPG 834

Query: 250 -RGKSGINGVPGTPAI 264
            +GK GI G PG P +
Sbjct: 835 LKGKDGIPGAPGLPGL 850



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 91/201 (45%), Gaps = 48/201 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE-------------- 157
            PGL+G  G  G  G KGE G+ G  G  G PG  G PG  G+PG E              
Sbjct: 848  PGLEGQRGLPGVPGQKGESGLPGLAGAPGFPGAKGEPGLPGLPGKEGPQGPPGQPGAPGF 907

Query: 158  -GKRGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDGL 201
             G++G +G  G PG  G+ GD G  G                KG  G+PG  G  G  GL
Sbjct: 908  PGQKGDEGLPGLPGVSGMKGDTGLPGVPGLAGPPGQPGFPGQKGQPGFPGVAGAKGEAGL 967

Query: 202  PGEP---------GLDGIPGRNGMDGIPGKDGLPGKDGIPGT---------NGTNGEKGM 243
            PG P         GL G+PG  GM G PG  G PG+DG+PG          NG  GEKG 
Sbjct: 968  PGLPGAPGQKGEQGLAGLPGIPGMKGAPGIPGAPGQDGLPGLPGVKGDRGFNGLPGEKGE 1027

Query: 244  TGPRGNRGKSGINGVPGTPAI 264
             GP    G+ G  G+PG P +
Sbjct: 1028 PGPAARDGEKGEPGLPGQPGL 1048



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 93/226 (41%), Gaps = 74/226 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---------------KGERGEKGAPGVVGPPGPQGIPGD 156
           PGLQGP G  G  G KG  G+               KG  G+ G PG+ G  G  G PG 
Sbjct: 750 PGLQGPAGLPGLPGMKGNPGLPGAPGLAGLPGIPGEKGIAGKPGLPGLTGAKGEAGYPGQ 809

Query: 157 EGKRGPKGDM--------------------GYPGPQGIPGDEGKR------GPKGDMGYP 190
            G  GPKG+                     G PG  G+PG EG+R      G KG+ G P
Sbjct: 810 PGLPGPKGEPGPSTTGPPGPPGFPGLKGKDGIPGAPGLPGLEGQRGLPGVPGQKGESGLP 869

Query: 191 GRIGLDGRDGLPGEPGLDGIPGR---------------------NGMDGIPGKDGLPGKD 229
           G  G  G  G  GEPGL G+PG+                      G+ G+PG  G+ G  
Sbjct: 870 GLAGAPGFPGAKGEPGLPGLPGKEGPQGPPGQPGAPGFPGQKGDEGLPGLPGVSGMKGDT 929

Query: 230 GIPGTNG------------TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G+PG  G              G+ G  G  G +G++G+ G+PG P 
Sbjct: 930 GLPGVPGLAGPPGQPGFPGQKGQPGFPGVAGAKGEAGLPGLPGAPG 975



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 79/167 (47%), Gaps = 27/167 (16%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE-- 178
            KG+ G  G  G+ G  G++G PGV G  G  G+PG  G  G  G  G PG  G+PG E  
Sbjct: 836  KGKDGIPGAPGLPGLEGQRGLPGVPGQKGESGLPGLAGAPGFPGAKGEPGLPGLPGKEGP 895

Query: 179  -------------GKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------DGIPGR 213
                         G++G +G  G PG  G+ G  GLPG PGL             G PG 
Sbjct: 896  QGPPGQPGAPGFPGQKGDEGLPGLPGVSGMKGDTGLPGVPGLAGPPGQPGFPGQKGQPGF 955

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G  G+ GLPG  G PG  G  G  G+ G  G +G  GI G PG
Sbjct: 956  PGVAGAKGEAGLPGLPGAPGQKGEQGLAGLPGIPGMKGAPGIPGAPG 1002



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 75/169 (44%), Gaps = 35/169 (20%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              + G      E   PG QGP G  G  G KGE G+ G  G+KG  G  G PG  G+PG 
Sbjct: 1347 AGLPGLPGMKGESGLPGPQGPAGLPGLPGLKGEPGLPGFPGQKGETGFPGQPGIPGLPGM 1406

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGK-----------------RGPKGDMGYPGRIGLDGRD 199
                  KGD GYPG  G  G  GK                 RG KG+MG  G  G+ G  
Sbjct: 1407 ------KGDSGYPGAPGRDGAPGKQGEPGPMGPPGAQPIVQRGEKGEMGPMGAPGIRGEK 1460

Query: 200  GLPGEPGLDG---------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            GLPG   LDG           G  G DG PG+ G+PG+ G PG  G  G
Sbjct: 1461 GLPG---LDGLPGPSGPPGFAGAKGADGFPGQPGMPGEKGAPGLPGFPG 1506



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 52/98 (53%), Gaps = 12/98 (12%)

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIPGKDGL 225
           PGP G  G  G  GPKG+ G+PG  GL G  GLPG PG         M    G+PG  GL
Sbjct: 726 PGPPGKDGLPGLPGPKGEAGFPGAPGLQGPAGLPGLPG---------MKGNPGLPGAPGL 776

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  GIPG  G  G+ G+ G  G +G++G  G PG P 
Sbjct: 777 AGLPGIPGEKGIAGKPGLPGLTGAKGEAGYPGQPGLPG 814



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 73/169 (43%), Gaps = 44/169 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP G  G  G KGE G+ G +G  G PG+ G  G  G+PG  G++G  G  G PG 
Sbjct: 1341 PGKPGPAGLPGLPGMKGESGLPGPQGPAGLPGLPGLKGEPGLPGFPGQKGETGFPGQPGI 1400

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP-----------------------GEPGLD 208
             G+PG       KGD GYP   G  GRDG P                       GE G  
Sbjct: 1401 PGLPGM------KGDSGYP---GAPGRDGAPGKQGEPGPMGPPGAQPIVQRGEKGEMGPM 1451

Query: 209  GIPGRNGMDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTG 245
            G PG  G  G+PG D            G  G DG PG  G  GEKG  G
Sbjct: 1452 GAPGIRGEKGLPGLDGLPGPSGPPGFAGAKGADGFPGQPGMPGEKGAPG 1500



 Score = 42.7 bits (99), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 81/201 (40%), Gaps = 71/201 (35%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   +  E   PGL G  GQKGE   +G  G+ G  G KGAPG+ G PG  G+PG  G  
Sbjct: 957  GVAGAKGEAGLPGLPGAPGQKGE---QGLAGLPGIPGMKGAPGIPGAPGQDGLPGLPGV- 1012

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
              KGD G+    G+PG++G+ GP              RDG  GEPGL            P
Sbjct: 1013 --KGDRGF---NGLPGEKGEPGPAA------------RDGEKGEPGL------------P 1043

Query: 221  GK--------------------------------------DGLPGKDGIPGTNGTNGEKG 242
            G+                                       GLPGK G PG  G  G  G
Sbjct: 1044 GQPGLRGPQGPPGLPGLPGLKGDEGQPGYGAPGLMGEKGLPGLPGKPGRPGAPGPKGLDG 1103

Query: 243  MTGPRGNRGKSGINGVPGTPA 263
              G  G +G++G+ G PG P 
Sbjct: 1104 APGFPGLKGEAGLPGAPGLPG 1124



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 18/90 (20%)

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS--- 253
           G +G PG  G  G PG  G  G PG  G+ G+ G+PG  G   EKG++GP G RGK    
Sbjct: 255 GPEGAPGMKGEKGDPGEAGPRGFPGTPGVAGQPGLPGMKG---EKGLSGPAGPRGKEGRP 311

Query: 254 ------------GINGVPGTPAICAYKRES 271
                       G++G+PG P +   K E+
Sbjct: 312 GLPGPPGFKGDRGLDGLPGVPGLPGQKGEA 341



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 69/156 (44%), Gaps = 52/156 (33%)

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGE---PGLDGIPGRN 214
           +G KGD G PG  G+ G  G  GP G  G PG  G+DG+   GLPG+   PGLDG+PGR 
Sbjct: 420 KGEKGDSGIPGAPGVQGPPGLAGPPGAKGEPGPRGVDGQSIPGLPGKDGRPGLDGLPGRK 479

Query: 215 GMDGIP-----------------------------GKDGLPGKDGIPG------------ 233
           G  G+P                             G+DG PG  GIPG            
Sbjct: 480 GEMGLPGVRGPPGDSLNGLPGPPGPRGPQGPKGYDGRDGAPGLPGIPGPKGDRGGTCAFC 539

Query: 234 TNGTNGEK------GMTGPRGNRGKSGINGVPGTPA 263
            +G  GEK      G+ GP+G RG  GI G  G P 
Sbjct: 540 AHGAKGEKGDAGYAGLPGPQGERGLPGIPGATGAPG 575


>gi|62087670|dbj|BAD92282.1| alpha 2 type V collagen preproprotein variant [Homo sapiens]
          Length = 1502

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 475 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 525

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 526 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 585

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 586 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 642



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 462 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 518

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 519 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 575

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 576 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 625



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 750 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 809

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 810 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 868

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 869 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 916



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 581 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 640

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 641 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 700

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 701 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 760

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 761 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 793



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 270 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 329

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 330 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 389

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 390 GEAGPTGARGPEGPQGQRGET 410



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 992  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1045

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1046 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1105

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1106 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1149



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 537 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 596

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 597 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 651



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 704 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 763

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 764 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 823

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 824 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 870



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 88/219 (40%), Gaps = 72/219 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 299 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 358

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
            G  G+PG   K GP G +G PG  G  G  G+ GE G                      
Sbjct: 359 RGAHGMPG---KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 415

Query: 207 -----------LDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
                       DG PG  G  G PG                          G PG  G+
Sbjct: 416 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 475

Query: 232 PGTNGTNGEKGMTGPR---------GNRGKSGINGVPGT 261
           PG  G  G KG  GP          G  GK G  G PGT
Sbjct: 476 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT 514



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 819 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 878

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 879 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 932

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 933 GPLGEPGKEGPPGLRGDPGSHG 954



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1061 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1120

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1121 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1150



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 215 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGR 274

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 275 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGA 334

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 335 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 394

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 395 TGARGPEGPQGQRG 408



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 829 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 888

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 889 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 948

Query: 210 IPGRNG 215
            PG +G
Sbjct: 949 DPGSHG 954


>gi|556297|gb|AAA50292.1| alpha-1 type IV collagen [Mus musculus]
          Length = 1669

 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 104/202 (51%), Gaps = 34/202 (16%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQG-- 152
            V   G   S  E   PG+ G    +G  G+ GE G KGE+G+ G PG+   G PG +G  
Sbjct: 1013 VGGMGLPGSPGEKGVPGIPG---SQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQ 1069

Query: 153  ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                 PG  G++G KG  G PG   +PG  G RG  G++G+PG  GL G  G  G PGLD
Sbjct: 1070 GLAGFPGSPGEKGEKGSAGTPG---MPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLD 1126

Query: 209  GIPGRNGMDGIPG---------KDGLPGKDGIPGTNGTNGEKGMT-----------GPRG 248
            G+PG  G  G+PG         + G PG DGIPG+ G  GE+G+            G +G
Sbjct: 1127 GVPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFPGFPGSKGDKG 1186

Query: 249  NRGKSGINGVPGTPAICAYKRE 270
            ++G+ G  G+ G+P I   K E
Sbjct: 1187 SKGEVGFPGLAGSPGIPGVKGE 1208



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 86/154 (55%), Gaps = 13/154 (8%)

Query: 119  GQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GQKG+ G KG++G    KG RG+ G PGV   PG  G  G  G+ GPKGD G  G  G P
Sbjct: 948  GQKGDQGEKGQIGPTGDKGSRGDPGTPGV---PGKDGQAGHPGQPGPKGDPGLSGTPGSP 1004

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            G  G +G  G MG PG  G  G  G+PG  G+ G PG  G  G  G+ GLPG  GIPG  
Sbjct: 1005 GLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGI-GIPGRP 1063

Query: 236  GTNGEKGMT------GPRGNRGKSGINGVPGTPA 263
            G  G++G+       G +G +G +G  G+PG+P 
Sbjct: 1064 GDKGDQGLAGFPGSPGEKGEKGSAGTPGMPGSPG 1097



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 91/164 (55%), Gaps = 18/164 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGY 168
            PG QG  G  G  G+KGEMGV G  G+ G+PG  G PG  G  GD G     GP+GD G+
Sbjct: 863  PGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGF 922

Query: 169  PGPQG---IPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G +G   +PG  G          +G KGD G  G+IG  G  G  G+PG  G+PG++G 
Sbjct: 923  KGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQ 982

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 983  AGHPGQ---PGPKGDPGLSGTPGSPGLPGPKGSVGGMGLPGSPG 1023



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GP G KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 960  GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGPKGSVGGMGLP 1019

Query: 167  ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
                     G PG QG+PG  G++G KG+        +G PGR G  G  GL G PG  G
Sbjct: 1020 GSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPG 1079

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G PG  G PG  G PG  G  G  G+ G +G++G  G++GVPG
Sbjct: 1080 EKGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLDGVPG 1130



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 75/137 (54%), Gaps = 16/137 (11%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD--MGYPGRIGLDGRDGL 201
           + GPPG  G+PG  G  GP+GD G+PG  G PG  G++G  G   +G+PG  G  G DGL
Sbjct: 644 LPGPPGAAGLPGSPGFPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGL 703

Query: 202 PGEPGLDGIPGRNGMDGIPGK--------------DGLPGKDGIPGTNGTNGEKGMTGPR 247
           PGE G  G PGR G +G+PG                GL G+ G+PG  GT GEKG  G  
Sbjct: 704 PGEIGRPGSPGRPGFNGLPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGP 763

Query: 248 GNRGKSGINGVPGTPAI 264
           G  G+ G+ G PG   I
Sbjct: 764 GVPGEQGLTGPPGLQGI 780



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 84/175 (48%), Gaps = 23/175 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------- 155
            PG  GP G  G  G KG+ G+ G  G +G PG  G  G  G+PG                
Sbjct: 890  PGSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQ 949

Query: 156  --DEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
              D+G++G   P GD G  G  G PG  GK G  G  G PG  G  G  G PG PGL G 
Sbjct: 950  KGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGP 1009

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN--GVPGTPA 263
             G  G  G+PG  G  G  GIPG+ G  G  G  G +G +G+SG+   G+PG P 
Sbjct: 1010 KGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPG 1064



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 72/148 (48%), Gaps = 24/148 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G KG++G +G PG+ G  G  G+PG +G          PG  G PG +G+ G  G  G P
Sbjct: 840 GPKGDKGSQGLPGLTGQSGLPGLPGQQG---------TPGVPGFPGSKGEMGVMGTPGQP 890

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT------------- 237
           G  G  G  GLPGE G  G+PG +G  G PG  G  G  G+PG  G+             
Sbjct: 891 GSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQK 950

Query: 238 --NGEKGMTGPRGNRGKSGINGVPGTPA 263
              GEKG  GP G++G  G  G PG P 
Sbjct: 951 GDQGEKGQIGPTGDKGSRGDPGTPGVPG 978



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 87/207 (42%), Gaps = 65/207 (31%)

Query: 112 PGLQGPIGQKGEIG-----AKGEMGVKG------ERGEKGAPGV------VGPPGPQGIP 154
           PG  GP GQKGE G      KG+ G+ G      E+G  G PGV       GPPG QGI 
Sbjct: 722 PGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGIR 781

Query: 155 GDEGKRGP-----------------------------------KGDMGYPGPQGIPGDEG 179
           GD G  G                                    KG+ G+P   G PG + 
Sbjct: 782 GDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGEGPPGSSGPPGIKGEKGFP---GFPGLD- 837

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------GRNGMDGIPGKDGLPGKDG 230
             GPKGD G  G  GL G+ GLPG PG  G P         G  G+ G PG+ G PG  G
Sbjct: 838 MPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAG 897

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  G  G+ G+ G  G RG  G  G
Sbjct: 898 TPGLPGEKGDHGLPGSSGPRGDPGFKG 924



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 82/195 (42%), Gaps = 50/195 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G  G KGE G+       G PG+ G PG  GIPG  G++G  G  G PG 
Sbjct: 716 PGFNGLPGNPGPQGQKGEPGI-------GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGE 768

Query: 172 QGIPGDEGKRGPKGDMGYPG--------------------------------RIGLDGRD 199
           QG+ G  G +G +GD G PG                                  G+ G  
Sbjct: 769 QGLTGPPGLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGEGPPGSSGPPGIKGEK 828

Query: 200 GLPGEPGLD-----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           G PG PGLD           G+PG  G  G+PG  G  G  G+PG  G+ GE G+ G  G
Sbjct: 829 GFPGFPGLDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPG 888

Query: 249 NRGKSGINGVPGTPA 263
             G  G  G PG P 
Sbjct: 889 QPGSPGPAGTPGLPG 903



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 93/225 (41%), Gaps = 67/225 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--PGPQGIPGDEGKRGPKGDMGYP 169
           PG  GP G +G  G  G  G+ GE+G  G PG+  P  PGP+G+ G  G+ G  G  G P
Sbjct: 657 PGFPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGLPGEIGRPGSPGRP 716

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------IPGRNGMDGIP 220
           G  G+PG+ G +G KG+ G  G  GL G+ GLPG PG  G         +PG  G+ G P
Sbjct: 717 GFNGLPGNPGPQGQKGEPGI-GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPP 775

Query: 221 GKDGLPGKDGIPGTNGT--------------------------------NGEKG------ 242
           G  G+ G  G PG  G                                  GEKG      
Sbjct: 776 GLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGEGPPGSSGPPGIKGEKGFPGFPG 835

Query: 243 --MTGPRGNRGKSGI---------------NGVPGTPAICAYKRE 270
             M GP+G++G  G+                G PG P     K E
Sbjct: 836 LDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGE 880



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 75/157 (47%), Gaps = 38/157 (24%)

Query: 127 KGEMG--VKGERGEKGAPGVVGPPGPQGIPGDE-----------GKRGPKGDMGYPGPQG 173
           KG+MG   +G +G+KG  GV GPPG   +PG             G++G KG+ G+PG   
Sbjct: 217 KGQMGSSFQGPKGDKGEQGVSGPPG---VPGQAQVKEKGDFAPTGEKGQKGEPGFPG--- 270

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
           +PG        G+ G PG+ G  G+      PG DG  G  G  GIPG  G PG  G  G
Sbjct: 271 VPG-------YGEKGEPGKQGPRGK------PGKDGEKGERGSPGIPGDSGYPGLPGRQG 317

Query: 234 TNGTNGEKGMTGPRGN------RGKSGINGVPGTPAI 264
             G  GE G+ GP G        G+ G  G PG P +
Sbjct: 318 PQGEKGEAGLPGPPGTVIGTMPLGEKGDRGYPGAPGL 354



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 50/82 (60%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G+ G +G+ G  GE+GE+G+PG+ G  G  G+PG +G +G KG+ G PGP G     
Sbjct: 278 GEPGKQGPRGKPGKDGEKGERGSPGIPGDSGYPGLPGRQGPQGEKGEAGLPGPPGTVIGT 337

Query: 179 GKRGPKGDMGYPGRIGLDGRDG 200
              G KGD GYPG  GL G  G
Sbjct: 338 MPLGEKGDRGYPGAPGLRGEPG 359



 Score = 45.8 bits (107), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 60/123 (48%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           EIG  G+ G KG+RG               +PG +G  G       PGPQG PG  G+ G
Sbjct: 487 EIGFPGQPGAKGDRG---------------LPGRDGLEG------LPGPQGSPGLIGQPG 525

Query: 183 PKGDMGYPGRIGLD----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            KG+   PG I  D    G  G PG PG  G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 526 AKGE---PGEIFFDMRLKGDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGLK 582

Query: 239 GEK 241
           GE+
Sbjct: 583 GER 585



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 85/196 (43%), Gaps = 69/196 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG  GP GQKGE G+ G  G  GE+GE+G PG   P    G PG +G +G KG++G+PG 
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFP----GFPGSKGDKGSKGEVGFPGL 1196

Query: 171  --PQGIPGDEGKRG-----------------------PKGDMGYP--------------- 190
                GIPG +G++G                       PKGD G                 
Sbjct: 1197 AGSPGIPGVKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPP 1256

Query: 191  ------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                  G  G  G  G PG PG            +PG  G PG  G+PG  G+    G+T
Sbjct: 1257 GFPGINGPKGDKGNQGWPGAPG------------VPGPKGDPGFQGMPGIGGS---PGIT 1301

Query: 245  GPRGNRGKSGINGVPG 260
               G++G  G+ GVPG
Sbjct: 1302 ---GSKGDMGLPGVPG 1314


>gi|402888876|ref|XP_003907768.1| PREDICTED: collagen alpha-2(V) chain [Papio anubis]
          Length = 1499

 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 326

Query: 179 GK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
           G     GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GSMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 387 GEAGPTGARGPEGPQGQRGET 407



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 88/219 (40%), Gaps = 72/219 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G    KGE G  G+ G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGSMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
            G  G+PG   K GP G +G PG  G  G  G+ GE G                      
Sbjct: 356 RGAHGMPG---KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412

Query: 207 -----------LDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
                       DG PG  G  G PG                          G PG  G+
Sbjct: 413 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 472

Query: 232 PGTNGTNGEKGMTGPR---------GNRGKSGINGVPGT 261
           PG  G  G KG  GP          G  GK G  G PGT
Sbjct: 473 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT 511



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGTRGPEGPPGKPGEDGEPGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 272 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGSMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 332 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 392 TGARGPEGPQGQRG 405



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 21/117 (17%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------G 173
           +KGE G +               G+VGPPG +G PG  G+ GP G +G+ GPQ      G
Sbjct: 814 EKGEPGPR---------------GLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPG 858

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           + G+ G+ G KGD G PG  GL G  G  G  G+ G+ G  G  G PG  G PG  G
Sbjct: 859 VKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAG 915



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 87/234 (37%), Gaps = 78/234 (33%)

Query: 113 GLQGPIGQ------KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KR 160
           GL+GP G+      KGE G  G MG  G  G +G PG  G  GPQG PG  G      K 
Sbjct: 306 GLEGPKGEVGAPGSKGEAGPTGSMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKP 365

Query: 161 GPKGDMGYPGPQGIPGDEG---------KRGPKGDMGYPGR---------------IGLD 196
           GP G +G PG  G PG+ G          RGP+G  G  G                IG D
Sbjct: 366 GPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTD 425

Query: 197 GRDGL------------------------------------PGEPGLDGIPGRNGMDGIP 220
           G  G                                     PG+PG+ G  G  G  G P
Sbjct: 426 GTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEP 485

Query: 221 GKDGLPGKDGIPGTNGTNGEK------GMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G+ G  G PG  G  G +      G  GP G RG  G  G PG+  +   K
Sbjct: 486 GPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPK 539



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 210 IPGRNG 215
            PG +G
Sbjct: 946 DPGSHG 951


>gi|317418814|emb|CBN80852.1| Uncharacterized protein [Dicentrarchus labrax]
          Length = 1490

 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/140 (47%), Positives = 80/140 (57%), Gaps = 6/140 (4%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP+G KG  G  G  G KGE G KG  G  G  GP G  G+EGKRGP+G+ G  GP G P
Sbjct: 450 GPLGPKGTSGDPGIPGFKGEAGPKGEIGPAGLQGPTGPQGEEGKRGPRGEPGAAGPLGPP 509

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+   RG  G+ G+PG+ GL G  G PGE G  G  G  G +G PG+   PG+ G+PG  
Sbjct: 510 GE---RGAPGNRGFPGQDGLAGLKGAPGERGPSGASGPKGANGDPGR---PGEPGLPGAR 563

Query: 236 GTNGEKGMTGPRGNRGKSGI 255
           G  G  G  GP+G  G SG 
Sbjct: 564 GLTGRPGDAGPQGKVGPSGA 583



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 91/193 (47%), Gaps = 36/193 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
           PG  G  G+ G  GA+G  G +G RGE G PG  GP G  G PG +G  G KG  G P  
Sbjct: 371 PGSPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPSGASGNPGTDGIPGSKGSAGAPGI 430

Query: 170 ----------------------GPQ------GIPGDEGKRGPKGDMGYP------GRIGL 195
                                 GP+      GIPG +G+ GPKG++G        G  G 
Sbjct: 431 AGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIPGFKGEAGPKGEIGPAGLQGPTGPQGE 490

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +G+ G  GEPG  G  G  G  G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 491 EGKRGPRGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGLKGAPGERGPSGASGPKGANGD 550

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 551 PGRPGEPGLPGAR 563



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 89/180 (49%), Gaps = 21/180 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P GLQGP       G +GE G +G RGE GA G +GPPG +G PG
Sbjct: 463 IPGFKGEAGPKGEIGPAGLQGPT------GPQGEEGKRGPRGEPGAAGPLGPPGERGAPG 516

Query: 156 DE---GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           +    G+ G  G  G PG +G  G  G +G  GD G PG  GL G  GL G PG  G  G
Sbjct: 517 NRGFPGQDGLAGLKGAPGERGPSGASGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQG 576

Query: 213 RNGMDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G  G PG+D            G PG  G PG  G  GE G +G +G  G  G+ G+PG
Sbjct: 577 KVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGLGGAPGLRGLPG 636



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 89/219 (40%), Gaps = 72/219 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMG- 167
           PG++G  G  G  G+KGE G  G +GE GAPG     GP GP+G+PG+ G+ GP G  G 
Sbjct: 287 PGIKGHRGYPGLDGSKGETGAVGSKGESGAPGENGAPGPMGPRGLPGERGRPGPSGAAGA 346

Query: 168 -----------------------YPG---------PQGIPGDEGKRGPKGDMGYPGRIGL 195
                                  +PG         P G  G EG +GP+G+ G PG  G 
Sbjct: 347 RGNDGLPGPAGPPGPVGPSGAPGFPGSPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGP 406

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIP------------------------GKDGLPGKDGI 231
            G     G PG DGIPG  G  G P                        G  G  G  GI
Sbjct: 407 SGAS---GNPGTDGIPGSKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGI 463

Query: 232 PGTNGTNGEKGM---------TGPRGNRGKSGINGVPGT 261
           PG  G  G KG          TGP+G  GK G  G PG 
Sbjct: 464 PGFKGEAGPKGEIGPAGLQGPTGPQGEEGKRGPRGEPGA 502



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 78/178 (43%), Gaps = 30/178 (16%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G    +    PPGLQG  G++G  G  G  G +G+ GEKG         P+G  G +G R
Sbjct: 738 GPSGGSGAQGPPGLQGMPGERGSAGIPGPKGDRGDIGEKG---------PEGASGKDGAR 788

Query: 161 ---------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                                GP G  G PG +G PGD G+ GP G  G+ G  G DG+ 
Sbjct: 789 GLTGPIGPPGPGGPNGEKGESGPAGPSGAPGTRGAPGDRGETGPPGPAGFAGPPGSDGQP 848

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G+ GE G  G  G  G  G  G  G PG  G  G +G  G +G  GP G  G  G  G
Sbjct: 849 GIKGEQGESGQKGDAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAG 906



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 85/201 (42%), Gaps = 36/201 (17%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +GF        P GLQGP   +G  G  G  G KG  G  G  G  GPPG QG+PG+ G 
Sbjct: 704 RGFPGERGAAGPQGLQGP---RGLPGTPGTDGPKGATGPSGGSGAQGPPGLQGMPGERGS 760

Query: 160 R---GPK---GDMGYPGPQGIPGDEGKR---------------------GPKGDMGYPGR 192
               GPK   GD+G  GP+G  G +G R                     GP G  G PG 
Sbjct: 761 AGIPGPKGDRGDIGEKGPEGASGKDGARGLTGPIGPPGPGGPNGEKGESGPAGPSGAPGT 820

Query: 193 IGLD---GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGP 246
            G     G  G PG  G  G PG +G  GI G+ G  G+    G PG  G +G  G  GP
Sbjct: 821 RGAPGDRGETGPPGPAGFAGPPGSDGQPGIKGEQGESGQKGDAGAPGPQGPSGAPGPAGP 880

Query: 247 RGNRGKSGINGVPGTPAICAY 267
            G  G  G  G  G P    +
Sbjct: 881 TGVSGPKGARGAQGPPGATGF 901



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 76/171 (44%), Gaps = 48/171 (28%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG--------- 158
           E  P G  GP G +G  G +GE G +G RGE GA G +GPPG +G PG+ G         
Sbjct: 469 EAGPKGEIGPAGLQGPTGPQGEEGKRGPRGEPGAAGPLGPPGERGAPGNRGFPGQDGLAG 528

Query: 159 ------KRGPKG---------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---- 199
                 +RGP G         D G PG  G+PG  G  G  GD G  G++G  G      
Sbjct: 529 LKGAPGERGPSGASGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDG 588

Query: 200 -----------------GLPGEPGLDGIPGRNG---MDGIPGKDGLPGKDG 230
                            G PG  G  G PG++G   + G PG  GLPGKDG
Sbjct: 589 RPGPPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGLGGAPGLRGLPGKDG 639



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 92/207 (44%), Gaps = 39/207 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK---------------GERGEKG 140
           L  M G   S     P G +G IG+KG  GA G+ G +               GE+GE G
Sbjct: 751 LQGMPGERGSAGIPGPKGDRGDIGEKGPEGASGKDGARGLTGPIGPPGPGGPNGEKGESG 810

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIG 194
             G  G PG +G PGD G+ GP G  G+ GP       GI G++G+ G KGD G PG  G
Sbjct: 811 PAGPSGAPGTRGAPGDRGETGPPGPAGFAGPPGSDGQPGIKGEQGESGQKGDAGAPGPQG 870

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------------------IPGTNG 236
             G  G  G  G+ G  G  G  G PG  G PG  G                   PG +G
Sbjct: 871 PSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPAGPAGPPGKDG 930

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G +G  GP G +G +G+ G  GTP 
Sbjct: 931 PKGVRGDGGPPGRQGDAGLRGPAGTPG 957



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 74/182 (40%), Gaps = 57/182 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
            P G  GP G  G+ G KGE G  G++G+ GAPG  GP   PGP G  G  G +G +G  G
Sbjct: 835  PAGFAGPPGSDGQPGIKGEQGESGQKGDAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQG 894

Query: 168  YPGPQGIPGDEG---------------------KRGPK---GDMGYPGR---IGLDGRDG 200
             PG  G PG  G                     K GPK   GD G PGR    GL G  G
Sbjct: 895  PPGATGFPGAAGRVGPPGPNGNPGPAGPAGPPGKDGPKGVRGDGGPPGRQGDAGLRGPAG 954

Query: 201  LPGEP---------------------------GLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             PGE                            GL G  G  G  G+PG  G PGK G PG
Sbjct: 955  TPGEKGDAGEDGPPGPPGPSGPQGLGGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 1014

Query: 234  TN 235
             +
Sbjct: 1015 GS 1016



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/150 (43%), Positives = 79/150 (52%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           GE GA G  G++G RG  G PG  GP G  G  G  G +GP G  G PG +G  G  G +
Sbjct: 708 GERGAAGPQGLQGPRGLPGTPGTDGPKGATGPSGGSGAQGPPGLQGMPGERGSAGIPGPK 767

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ G  G  G PGT G  G++
Sbjct: 768 GDRGDIGEKGPEGASGKDGARGLTGPIGPPGPGGPNGEKGESGPAGPSGAPGTRGAPGDR 827

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G TGP G  G +G  G  G P I   + ES
Sbjct: 828 GETGPPGPAGFAGPPGSDGQPGIKGEQGES 857



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 81/196 (41%), Gaps = 48/196 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G  GP G +G  G  G  G+KG RG       KG  G VG  G  G PG+ G  GP G  
Sbjct: 270 GPAGPQGARGFPGTPGLPGIKGHRGYPGLDGSKGETGAVGSKGESGAPGENGAPGPMGPR 329

Query: 167 GYPGPQGIPGDEGKRGPKGD---------------------MGYPGRIGLDGRDGLPGEP 205
           G PG +G PG  G  G +G+                      G PG  G  G  G  G  
Sbjct: 330 GLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPSGAPGFPGSPGSKGEAGPTGARGPE 389

Query: 206 GLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGM------------------T 244
           G  G  G +G  G PG  G    PG DGIPG+ G+ G  G+                  T
Sbjct: 390 GAQGPRGESGTPGSPGPSGASGNPGTDGIPGSKGSAGAPGIAGAPGFPGPRGPPGPQGAT 449

Query: 245 GPRGNRGKSGINGVPG 260
           GP G +G SG  G+PG
Sbjct: 450 GPLGPKGTSGDPGIPG 465



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 63/142 (44%), Gaps = 30/142 (21%)

Query: 152 GIPGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G PG  G+RGP   +G  G+PG  G+PG +G RG  G  G  G  G  G  G  G PG +
Sbjct: 261 GKPGKSGERGPAGPQGARGFPGTPGLPGIKGHRGYPGLDGSKGETGAVGSKGESGAPGEN 320

Query: 209 GIPGRNGMDGIPGKDGLPGKDG---------------------------IPGTNGTNGEK 241
           G PG  G  G+PG+ G PG  G                            PG+ G+ GE 
Sbjct: 321 GAPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPSGAPGFPGSPGSKGEA 380

Query: 242 GMTGPRGNRGKSGINGVPGTPA 263
           G TG RG  G  G  G  GTP 
Sbjct: 381 GPTGARGPEGAQGPRGESGTPG 402



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 74/164 (45%), Gaps = 18/164 (10%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G  G+ G+ G +G  G +G RG  G PG+ G  G +G PG +G +G  G +G  G  G P
Sbjct: 258 GEAGKPGKSGERGPAGPQGARGFPGTPGLPGIKGHRGYPGLDGSKGETGAVGSKGESGAP 317

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------------------GIPGRNGMD 217
           G+ G  GP G  G PG  G  G  G  G  G D                  G PG  G  
Sbjct: 318 GENGAPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPSGAPGFPGSPGSK 377

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G  G +G  G  G +G  G  GP G  G  G +G+PG+
Sbjct: 378 GEAGPTGARGPEGAQGPRGESGTPGSPGPSGASGNPGTDGIPGS 421



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 55/118 (46%), Gaps = 18/118 (15%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P G  GP G  G+ G  GE G+ G RG  G PG  GP   QG  G  
Sbjct: 525 GLAGLKGAPGERGPSGASGPKGANGDPGRPGEPGLPGARGLTGRPGDAGP---QGKVGPS 581

Query: 158 GK---------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           G                RG  G MG+PGP+G  G+ GK G KG  G PG  GL G+DG
Sbjct: 582 GAPGEDGRPGPPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGLGGAPGLRGLPGKDG 639



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 80/211 (37%), Gaps = 72/211 (34%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPPGPQGIPGDEG----- 158
            G QG  GQKG+ GA G  G  G           G KGA G  GPPG  G PG  G     
Sbjct: 852  GEQGESGQKGDAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPP 911

Query: 159  ----------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---------- 192
                            K GPKG  G  GP G  GD G RGP G  G  G           
Sbjct: 912  GPNGNPGPAGPAGPPGKDGPKGVRGDGGPPGRQGDAGLRGPAGTPGEKGDAGEDGPPGPP 971

Query: 193  --------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD--------------- 223
                          +GL G+ G  G PGL G  G  G  G PG                 
Sbjct: 972  GPSGPQGLGGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGSGDRGPPGPVGPPGLT 1031

Query: 224  ---GLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
               G PG++G PG++G  G  G TG +G+RG
Sbjct: 1032 GPAGEPGREGNPGSDGPPGRDGATGIKGDRG 1062



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 48/93 (51%), Gaps = 3/93 (3%)

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           D G  G  G  G+ G  GP+G  G+PG  GL G  G  G PGLDG  G  G  G  G+ G
Sbjct: 256 DDGEAGKPGKSGERGPAGPQGARGFPGTPGLPGIKGHRGYPGLDGSKGETGAVGSKGESG 315

Query: 225 LPGKDGIPGTNGTNG---EKGMTGPRGNRGKSG 254
            PG++G PG  G  G   E+G  GP G  G  G
Sbjct: 316 APGENGAPGPMGPRGLPGERGRPGPSGAAGARG 348



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 90/267 (33%), Gaps = 105/267 (39%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------ 149
            +   QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG      
Sbjct: 850  IKGEQGESGQKGDAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVG 909

Query: 150  ---------------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEG--------- 179
                                 P+G+ GD G  G +GD G  GP G PG++G         
Sbjct: 910  PPGPNGNPGPAGPAGPPGKDGPKGVRGDGGPPGRQGDAGLRGPAGTPGEKGDAGEDGPPG 969

Query: 180  ---------------------KRGPKGDMGYPGRIGLDGRDGLPG--------------- 203
                                 +RG +G  G PG  G  G+ G PG               
Sbjct: 970  PPGPSGPQGLGGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGSGDRGPPGPVGPPG 1029

Query: 204  ------EPGLDGIPGRNGMDGIPGKDGLPGKDG------------------------IPG 233
                  EPG +G PG    DG PG+DG  G  G                          G
Sbjct: 1030 LTGPAGEPGREGNPG---SDGPPGRDGATGIKGDRGNTGPAGAPGAPGAPGAGGPVGPTG 1086

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  GE G  GP G  G +G  G+PG
Sbjct: 1087 KQGDRGESGAQGPAGPSGPAGARGMPG 1113



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 45/92 (48%), Gaps = 12/92 (13%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G +G+RGE GA G  GP             GP G  G PGPQG  GD+G+ G  G+ G  
Sbjct: 1086 GKQGDRGESGAQGPAGP------------SGPAGARGMPGPQGPRGDKGEAGEAGERGQK 1133

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            G  G  G  GLPG PG  G  G  G  G  G+
Sbjct: 1134 GHRGFTGLQGLPGPPGQAGDQGATGPAGPSGQ 1165



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 77/190 (40%), Gaps = 63/190 (33%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+             G +G+ 
Sbjct: 600 GQPGVMGFPGPKGATGEPGKSGEKGLGGAPGLRGLPGKDGETGPAGPPGPAGPAGERGEQ 659

Query: 167 GYPGP---------------------------------------QGIPGDEGKRGPKGDM 187
           G PGP                                       +G PG+ G  GP+G  
Sbjct: 660 GQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGGTGPRGERGFPGERGAAGPQG-- 717

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                  L G  GLPG PG DG  G  G  G  G  G PG  G+PG  G+    G+ GP+
Sbjct: 718 -------LQGPRGLPGTPGTDGPKGATGPSGGSGAQGPPGLQGMPGERGS---AGIPGPK 767

Query: 248 GNRGKSGING 257
           G+RG  G  G
Sbjct: 768 GDRGDIGEKG 777



 Score = 42.7 bits (99), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           + G+PG +G  G +G +GP+G    PG  G DG  G  G  G  G  G  G+ G+PG+  
Sbjct: 703 ERGFPGERGAAGPQGLQGPRG---LPGTPGTDGPKGATGPSGGSGAQGPPGLQGMPGER- 758

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G  GIPG  G  G+ G  GP G  GK G 
Sbjct: 759 --GSAGIPGPKGDRGDIGEKGPEGASGKDGA 787



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 81/189 (42%), Gaps = 42/189 (22%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------------------RGPKGD 165
            +G +G+ G+RGE+G PG+   PGP G PG +G                       G  G 
Sbjct: 983  RGIVGLPGQRGERGFPGL---PGPSGEPGKQGAPGGSGDRGPPGPVGPPGLTGPAGEPGR 1039

Query: 166  MGYPGPQGIPGDEGKRGPKGDMG---------------YPGRIGLDGRDGLPGEPGLDGI 210
             G PG  G PG +G  G KGD G                 G +G  G+ G  GE G  G 
Sbjct: 1040 EGNPGSDGPPGRDGATGIKGDRGNTGPAGAPGAPGAPGAGGPVGPTGKQGDRGESGAQGP 1099

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G +G  G     G+PG  G  G  G  GE G  G +G+RG +G+ G+PG P     +  
Sbjct: 1100 AGPSGPAGA---RGMPGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGQAGDQGA 1156

Query: 271  SCSLLPNSE 279
            +    P+ +
Sbjct: 1157 TGPAGPSGQ 1165


>gi|119631311|gb|EAX10906.1| collagen, type V, alpha 2, isoform CRA_a [Homo sapiens]
          Length = 1497

 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 470 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 520

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 521 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 580

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 581 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 637



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 457 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 513

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 514 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 570

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 571 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 620



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 745 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 804

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 805 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 863

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 864 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 911



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 576 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 635

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 636 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 695

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 696 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 755

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 756 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 788



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 265 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 324

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 325 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 384

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 385 GEAGPTGARGPEGPQGQRGET 405



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 987  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1040

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1041 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1100

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1101 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1144



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 532 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 591

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 592 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 646



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 699 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 758

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 759 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 818

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 819 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 865



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 88/219 (40%), Gaps = 72/219 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 294 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 353

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
            G  G+PG   K GP G +G PG  G  G  G+ GE G                      
Sbjct: 354 RGAHGMPG---KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 410

Query: 207 -----------LDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
                       DG PG  G  G PG                          G PG  G+
Sbjct: 411 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 470

Query: 232 PGTNGTNGEKGMTGPR---------GNRGKSGINGVPGT 261
           PG  G  G KG  GP          G  GK G  G PGT
Sbjct: 471 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT 509



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 814 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 873

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 874 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 927

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 928 GPLGEPGKEGPPGLRGDPGSHG 949



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1056 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1115

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1116 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1145



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 210 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGR 269

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 270 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGA 329

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 330 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 389

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 390 TGARGPEGPQGQRG 403



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 824 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 883

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 884 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 943

Query: 210 IPGRNG 215
            PG +G
Sbjct: 944 DPGSHG 949


>gi|405961564|gb|EKC27351.1| Collagen-like protein 7 [Crassostrea gigas]
          Length = 434

 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 90/188 (47%), Gaps = 29/188 (15%)

Query: 85  WVWLNAYSRIPLVAMQGFCNSTKEY-CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG 143
           WV+ N + +  +          K +  PP    P G KG+ G KG  G KG  G  G PG
Sbjct: 151 WVYKNLFDKTGIAFGMHVIMKQKIFDPPPPTDCPKGCKGDPGEKGADGPKGSSGIPGTPG 210

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             G PG +G PG++G RG +G  G PGP+G+PGD+G+ G +G+ G PG  G  G  G PG
Sbjct: 211 TPGRPGDKGEPGEKGDRGVQGPTGQPGPKGVPGDKGQPGNRGEKGEPGDKGQKGDTGNPG 270

Query: 204 EP---------------GLDGIPGRNGMDGIPGKDGLPGKDGI-------------PGTN 235
           +P               G  G  G  G+ G PG+DG PG DG+             PG  
Sbjct: 271 QPGGKGDKGDKGEKGDTGSQGEQGSQGLAGSPGQDGTPGSDGVCPTECTECECVGQPGIP 330

Query: 236 GTNGEKGM 243
           G  GEKG 
Sbjct: 331 GEKGEKGQ 338



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 51/98 (52%), Gaps = 12/98 (12%)

Query: 130 MGVKGERGEKGAPGVVGPP------------GPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           MG KG  G+ GAPG+ G              GPQG+ G+ G  GP+G  G PG  G  G 
Sbjct: 1   MGEKGHPGQDGAPGMKGDKGDKGDKGHKGERGPQGVAGETGPSGPRGQRGIPGQSGEDGH 60

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            G RGPKG  G PG  G  G  GL G PG  GIPG+ G
Sbjct: 61  PGSRGPKGQKGDPGSPGDSGHPGLDGHPGPRGIPGKPG 98



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 65/147 (44%), Gaps = 24/147 (16%)

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
           P G +G PG++G  GPKG  G PG    PG  G+    GD G PG  G  G  G  G+PG
Sbjct: 184 PKGCKGDPGEKGADGPKGSSGIPG---TPGTPGR---PGDKGEPGEKGDRGVQGPTGQPG 237

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRG 248
             G+PG  G  G  G+ G PG  G  G  G  G+                  +G  G +G
Sbjct: 238 PKGVPGDKGQPGNRGEKGEPGDKGQKGDTGNPGQPGGKGDKGDKGEKGDTGSQGEQGSQG 297

Query: 249 NRGKSGINGVPGTPAICAYKRESCSLL 275
             G  G +G PG+  +C  +   C  +
Sbjct: 298 LAGSPGQDGTPGSDGVCPTECTECECV 324



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 39/68 (57%)

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GPQG+ G+ G  GP+G  G PG+ G DG  G  G  G  G PG  G  G PG DG PG  
Sbjct: 32  GPQGVAGETGPSGPRGQRGIPGQSGEDGHPGSRGPKGQKGDPGSPGDSGHPGLDGHPGPR 91

Query: 230 GIPGTNGT 237
           GIPG  G+
Sbjct: 92  GIPGKPGS 99



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 12/94 (12%)

Query: 164 GDMGYPGPQGIPG------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G+PG  G PG             +G+RGP+G  G  G  G  G+ G+PG+ G DG P
Sbjct: 2   GEKGHPGQDGAPGMKGDKGDKGDKGHKGERGPQGVAGETGPSGPRGQRGIPGQSGEDGHP 61

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           G  G  G  G  G PG  G PG +G  G +G+ G
Sbjct: 62  GSRGPKGQKGDPGSPGDSGHPGLDGHPGPRGIPG 95



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 6/70 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYP 169
           G QG  G+ G  G +G+ G+ G+ GE G PG  GP G +G    PGD G     G  G+P
Sbjct: 32  GPQGVAGETGPSGPRGQRGIPGQSGEDGHPGSRGPKGQKGDPGSPGDSGH---PGLDGHP 88

Query: 170 GPQGIPGDEG 179
           GP+GIPG  G
Sbjct: 89  GPRGIPGKPG 98


>gi|344240114|gb|EGV96217.1| Collagen alpha-3(V) chain [Cricetulus griseus]
          Length = 1351

 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 92/182 (50%), Gaps = 36/182 (19%)

Query: 112 PGLQGPIGQKGE------------------IGAKGEMGVKGERGEKGAPGVVGP---PGP 150
           PG QGPIG  GE                   G  G  G  GE+G +G PG  GP   PGP
Sbjct: 475 PGPQGPIGTPGEKGPPGNPGIPGVPGAEGPPGHPGHEGPTGEKGAQGPPGSAGPLGYPGP 534

Query: 151 QGI------PGDEGKRGPKGD---MGYPGPQGIPGDEGKR------GPKGDMGYPGRIGL 195
           +G+      PG +G  GPKGD    G+PGP G  G++GKR      G +G+ G PG  G 
Sbjct: 535 RGVKGEDGFPGFKGDEGPKGDRGSTGFPGPLGPLGEKGKRGKAGQPGEEGERGVPGTRGD 594

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G+ G  G+PG  G  G+NG  G PG+ G  GKDGIPG  G  GE G  G  G  G +G+
Sbjct: 595 RGQPGATGQPGPKGDVGQNGSPGAPGEKGPQGKDGIPGHPGQRGELGFQGQTGPPGPAGV 654

Query: 256 NG 257
            G
Sbjct: 655 LG 656



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/191 (40%), Positives = 92/191 (48%), Gaps = 39/191 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG------APGV---VGPPGPQGIPGDEGKR-- 160
           PGL G  GQ+G+ G  G+ G  GE GEKG      APG    VG PGPQG  G  G++  
Sbjct: 430 PGLPGEKGQRGDFGHVGQPGPPGEDGEKGVTGSDGAPGAKGNVGIPGPQGPIGTPGEKGP 489

Query: 161 -------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                        GP G  G+ GP G  G +G  G  G +GYPG  G+ G DG PG  G 
Sbjct: 490 PGNPGIPGVPGAEGPPGHPGHEGPTGEKGAQGPPGSAGPLGYPGPRGVKGEDGFPGFKGD 549

Query: 208 DGIPGRNGMDGIP------------GKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGK 252
           +G  G  G  G P            GK G PG++   G+PGT G  G+ G TG  G +G 
Sbjct: 550 EGPKGDRGSTGFPGPLGPLGEKGKRGKAGQPGEEGERGVPGTRGDRGQPGATGQPGPKGD 609

Query: 253 SGINGVPGTPA 263
            G NG PG P 
Sbjct: 610 VGQNGSPGAPG 620



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 84/165 (50%), Gaps = 21/165 (12%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  G+ G +G  G  G+KGE GE G  G  G  G +G+PGD G   PKGD G+ G
Sbjct: 372 PPGPVGLTGRPGPVGLPGYPGLKGESGEVGPQGRAGADGARGLPGDTG---PKGDRGFDG 428

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGR------DGLPGEPGLDGIPGRNGMDGIPGKD- 223
             G+PG++G+RG  G +G PG  G DG       DG PG  G  GIPG  G  G PG+  
Sbjct: 429 LPGLPGEKGQRGDFGHVGQPGPPGEDGEKGVTGSDGAPGAKGNVGIPGPQGPIGTPGEKG 488

Query: 224 -----------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                      G  G  G PG  G  GEKG  GP G+ G  G  G
Sbjct: 489 PPGNPGIPGVPGAEGPPGHPGHEGPTGEKGAQGPPGSAGPLGYPG 533



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 73/149 (48%), Gaps = 18/149 (12%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGD 156
           +G         PPG  GP+G  G  G KGE    G KG+ G KG  G  G PGP G  G+
Sbjct: 511 EGPTGEKGAQGPPGSAGPLGYPGPRGVKGEDGFPGFKGDEGPKGDRGSTGFPGPLGPLGE 570

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRG---------PKGDM------GYPGRIGLDGRDGL 201
           +GKRG  G  G  G +G+PG  G RG         PKGD+      G PG  G  G+DG+
Sbjct: 571 KGKRGKAGQPGEEGERGVPGTRGDRGQPGATGQPGPKGDVGQNGSPGAPGEKGPQGKDGI 630

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           PG PG  G  G  G  G PG  G+ G  G
Sbjct: 631 PGHPGQRGELGFQGQTGPPGPAGVLGPQG 659



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 89/185 (48%), Gaps = 33/185 (17%)

Query: 106 TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGK 159
           T    P GL G  G KGE G  G  G  G  G +G PG  GP G +G      +PG++G+
Sbjct: 379 TGRPGPVGLPGYPGLKGESGEVGPQGRAGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQ 438

Query: 160 RGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYP---GRIGLDGR------------ 198
           RG  G +G PGP      +G+ G +G  G KG++G P   G IG  G             
Sbjct: 439 RGDFGHVGQPGPPGEDGEKGVTGSDGAPGAKGNVGIPGPQGPIGTPGEKGPPGNPGIPGV 498

Query: 199 ---DGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
              +G PG PG +G  G  G  G PG     G PG  G+ G +G  G KG  GP+G+RG 
Sbjct: 499 PGAEGPPGHPGHEGPTGEKGAQGPPGSAGPLGYPGPRGVKGEDGFPGFKGDEGPKGDRGS 558

Query: 253 SGING 257
           +G  G
Sbjct: 559 TGFPG 563



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 92/204 (45%), Gaps = 54/204 (26%)

Query: 112 PGLQGPIGQKG------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG  GP+G+KG      + G +GE GV G RG++G PG  G PGP+G  G  G  G  G+
Sbjct: 562 PGPLGPLGEKGKRGKAGQPGEEGERGVPGTRGDRGQPGATGQPGPKGDVGQNGSPGAPGE 621

Query: 166 MGYPGPQGIPGDEGKR------------GPKGDMGYPGRIG------------------- 194
            G  G  GIPG  G+R            GP G +G  G++G                   
Sbjct: 622 KGPQGKDGIPGHPGQRGELGFQGQTGPPGPAGVLGPQGKVGDVGPLGERGPPGPPGPPGE 681

Query: 195 -----LDGRDGLPGEPGLDGIPGRN------------GMDGIPGKDGLPGKDGIPGTNGT 237
                ++G++G  GE G  G PG+             G  G PG  GL G  G PG  G 
Sbjct: 682 QGLPGMEGKEGAKGELGPLGSPGKEGPPGPMGFPGPQGAPGDPGPIGLKGDKGPPGPVGA 741

Query: 238 NGEKGMTGPRGNRGKSGINGVPGT 261
           NGE GM G +G++G  G +G  G 
Sbjct: 742 NGEVGMPGHKGSKGDKGDSGADGA 765



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 75/151 (49%), Gaps = 14/151 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGE--------RGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           GL GP G  G  G  G  G+ G         +G  G  G+ G PGP G+PG  G +G  G
Sbjct: 339 GLPGPAGLPGIPGVDGVRGLPGTVIMMPLSMKGPPGPVGLTGRPGPVGLPGYPGLKGESG 398

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD- 223
           ++G   PQG  G +G RG  GD G  G  G DG  GLPGE G  G  G  G  G PG+D 
Sbjct: 399 EVG---PQGRAGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDG 455

Query: 224 --GLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
             G+ G DG PG  G  G  G  GP G  G+
Sbjct: 456 EKGVTGSDGAPGAKGNVGIPGPQGPIGTPGE 486



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 76/140 (54%), Gaps = 14/140 (10%)

Query: 135 ERGEKGAPGVVGPP---GPQGIPGD--------EGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           +RG  G  G+ G P   G +G+PG         +G  GP G  G PGP G+PG  G +G 
Sbjct: 337 DRGLPGPAGLPGIPGVDGVRGLPGTVIMMPLSMKGPPGPVGLTGRPGPVGLPGYPGLKGE 396

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGE 240
            G++G  GR G DG  GLPG+ G  G  G +G+ G+PG+ G     G  G PG  G +GE
Sbjct: 397 SGEVGPQGRAGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGE 456

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG+TG  G  G  G  G+PG
Sbjct: 457 KGVTGSDGAPGAKGNVGIPG 476



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 87/206 (42%), Gaps = 60/206 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGD------ 156
           PG +G +GQ G  GA GE G +G         +RGE G  G  GPPGP G+ G       
Sbjct: 604 PGPKGDVGQNGSPGAPGEKGPQGKDGIPGHPGQRGELGFQGQTGPPGPAGVLGPQGKVGD 663

Query: 157 ------------------------EGKRGPKGDMGYPGPQG---------------IPGD 177
                                   EGK G KG++G  G  G                PGD
Sbjct: 664 VGPLGERGPPGPPGPPGEQGLPGMEGKEGAKGELGPLGSPGKEGPPGPMGFPGPQGAPGD 723

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            G  G KGD G PG +G +G  G+PG  G  G  G +G DG  G+ G PG  G  G +G 
Sbjct: 724 PGPIGLKGDKGPPGPVGANGEVGMPGHKGSKGDKGDSGADGAQGRRGPPGLFGQKGDDGV 783

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G+ GP       G+ G+PG P 
Sbjct: 784 RGFVGVIGP------PGLQGLPGPPG 803



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 71/122 (58%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           +G+ GAKGE+G  G  G++G PG +G PGPQG PGD G  G KGD G PGP G  G+ G 
Sbjct: 688 EGKEGAKGELGPLGSPGKEGPPGPMGFPGPQGAPGDPGPIGLKGDKGPPGPVGANGEVGM 747

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            G KG  G  G  G DG  G  G PGL G  G +G+ G  G  G PG  G+PG  G  GE
Sbjct: 748 PGHKGSKGDKGDSGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGE 807

Query: 241 KG 242
            G
Sbjct: 808 VG 809



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 75/166 (45%), Gaps = 30/166 (18%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGPQGIPG--------- 155
            PPG  GP G++GE GAKG+ G        G  G +G PG +GP G  GIPG         
Sbjct: 924  PPGRMGPEGREGEKGAKGDAGPDGPPGRTGPTGARGPPGRLGPDGLPGIPGPVGEPGLLG 983

Query: 156  ------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                          G  G KGD G  G +G  G  G  GP G+ G  G  GL G  G PG
Sbjct: 984  PPGLIGPPGPLGPPGLPGLKGDAGLKGEKGHIGLIGLVGPAGEAGEKGDQGLPGVQGPPG 1043

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
              G  G+PG  G  G PG    PG  G  G  G+ G  G  GPRG+
Sbjct: 1044 PQGDTGLPGPAGALGHPGP---PGVVGPLGQKGSKGSPGSPGPRGD 1086



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 91/229 (39%), Gaps = 78/229 (34%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------------------VVGPP 148
           G  GP+G  GE+G  G  G KG++G+ GA G                        V+GPP
Sbjct: 734 GPPGPVGANGEVGMPGHKGSKGDKGDSGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPP 793

Query: 149 GPQGIPGDEGKRGPKGDMGYP---------------GPQGIPGDEGKR------------ 181
           G QG+PG  G++G  GD+G                 G +G PGD G              
Sbjct: 794 GLQGLPGPPGEKGEVGDVGSMGPPGLPGGVGQPGAVGEKGEPGDTGAAGPPGVPGTPGPK 853

Query: 182 ---GPKGDMG------YPGRIGLDGRDGLPGEPGLDGIPGRNG----------------- 215
              G KGD G       PG+ G  G DG  G  G+DG PG  G                 
Sbjct: 854 GEIGEKGDSGPSGAAGPPGKKGPPGEDGSKGSMGVDGAPGEKGDAGDIGGPGPPGASGEP 913

Query: 216 -MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G+PGK G PG+ G  G  G  G KG  GP G  G++G  G  G P 
Sbjct: 914 GARGLPGKRGPPGRMGPEGREGEKGAKGDAGPDGPPGRTGPTGARGPPG 962



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 70/183 (38%), Gaps = 69/183 (37%)

Query: 123  EIGAKGEMGVKGERGEKG---------------------APGVVGPPGPQGIPGDEGKRG 161
            E G+KG MGV G  GEKG                      PG  GPPG  G  G EG++G
Sbjct: 879  EDGSKGSMGVDGAPGEKGDAGDIGGPGPPGASGEPGARGLPGKRGPPGRMGPEGREGEKG 938

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             KGD G  GP G  G  G RGP      PGR+G DG                  + GIPG
Sbjct: 939  AKGDAGPDGPPGRTGPTGARGP------PGRLGPDG------------------LPGIPG 974

Query: 222  ------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                                      GL G  G+ G  G  G  G+ GP G  G+ G  G
Sbjct: 975  PVGEPGLLGPPGLIGPPGPLGPPGLPGLKGDAGLKGEKGHIGLIGLVGPAGEAGEKGDQG 1034

Query: 258  VPG 260
            +PG
Sbjct: 1035 LPG 1037



 Score = 43.1 bits (100), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 50/98 (51%), Gaps = 12/98 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GPIG KG+ G  G +G  GE         VG PG +G  GD+G  G  G  G  GP
Sbjct: 721 PGDPGPIGLKGDKGPPGPVGANGE---------VGMPGHKGSKGDKGDSGADGAQGRRGP 771

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
              PG  G++G  G  G+ G IG  G  GLPG PG  G
Sbjct: 772 ---PGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKG 806


>gi|189242045|ref|XP_968176.2| PREDICTED: similar to collagen alpha chain, anopheles [Tribolium
           castaneum]
          Length = 1606

 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/164 (45%), Positives = 89/164 (54%), Gaps = 21/164 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G  G  G+ G MG KGE+G  G  G VG PGP+G+ GDEGKRG  G+      
Sbjct: 521 PGLPGADGAPGSPGSPGAMGPKGEQGLAGPAGPVGFPGPRGVKGDEGKRGILGE------ 574

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGK 228
           +G  GD G  G KGD+G  G +GL    GLPG PGL+G  G  G DG  G+    GLPG+
Sbjct: 575 KGDKGDRGLEGEKGDLGMKGSVGL---VGLPGIPGLEGPEGPKGFDGPRGETGNVGLPGE 631

Query: 229 DGIPGTN---------GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G           G  G+KG +G  G+ G+ G  G PGTP 
Sbjct: 632 KGKDGPPGLPGYPGNLGEKGDKGSSGKIGDNGEKGDRGNPGTPG 675



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 82/187 (43%), Gaps = 45/187 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------------------V 145
           G+ GP G +G  GA G  G+ G+ G  G+PG                            V
Sbjct: 717 GIPGPEGPRGFAGAPGPPGINGKDGHPGSPGERGPPGEPGKPGMVGPPGVIGPPGPTGEV 776

Query: 146 GPPGPQ------------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
           GP G              G+PG+ GK G  G    PGP+G PG E   GP G  G+PG  
Sbjct: 777 GPIGEHGPPGLPGVPGEAGLPGEAGKEGAPGS---PGPEGKPGPE---GPTGLPGFPGER 830

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           GL G  G+PG  G  G PG  G+ G  G+ G PGKDG  G  G  G  G  G  G +G+ 
Sbjct: 831 GLTGLPGIPGLKGDTGPPGAPGVTGDKGQQGEPGKDGPQGPEGRKGPPGTAGSPGAKGER 890

Query: 254 GINGVPG 260
           G  G PG
Sbjct: 891 GEAGPPG 897



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 76/162 (46%), Gaps = 12/162 (7%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      +   PG  GP G+ G  G  G  G  GERG  G PG+ G  G  G PG  G  
Sbjct: 795 GLPGEAGKEGAPGSPGPEGKPGPEGPTGLPGFPGERGLTGLPGIPGLKGDTGPPGAPGVT 854

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---- 216
           G KG  G PG  G  G EG++GP G  G PG  G  G  G PG  G DG+PG  G+    
Sbjct: 855 GDKGQQGEPGKDGPQGPEGRKGPPGTAGSPGAKGERGEAGPPGPSGRDGLPGLRGLPGGP 914

Query: 217 --------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                   DG  G  G PG+ G  G+ G  G  G TGP G+R
Sbjct: 915 GPVGPPGEDGDKGDVGPPGEKGFKGSQGETGPSGSTGPPGSR 956



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 55/106 (51%)

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG+ GK G  G  G  G+ G +G  GLPG PG  G+ G  G+ G+ G  G PG  G+ 
Sbjct: 795 GLPGEAGKEGAPGSPGPEGKPGPEGPTGLPGFPGERGLTGLPGIPGLKGDTGPPGAPGVT 854

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
           G  G  GE G  GP+G  G+ G  G  G+P     + E+    P+ 
Sbjct: 855 GDKGQQGEPGKDGPQGPEGRKGPPGTAGSPGAKGERGEAGPPGPSG 900



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 48/88 (54%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  G  GE G  G  G  G+PG  G PGP G  GD G+RGPKG  G  G  GI GD G++
Sbjct: 1209 GAPGVAGENGAPGSPGLTGSPGKTGSPGPAGQKGDRGRRGPKGHRGEMGLSGIKGDLGEK 1268

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            G KGD G PG  G  G  G  G  G+ G
Sbjct: 1269 GNKGDKGPPGPEGRKGETGPEGPIGIKG 1296



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 101/242 (41%), Gaps = 69/242 (28%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           + GP G KGE G  G  G+ G++GE+G PG+VG PG +G  G +G+ GP G  G PG  G
Sbjct: 388 ITGPPGPKGEQGLLGLPGLPGDKGERGLPGLVGEPGLRGHDGMQGEEGPPGLSGMPGEMG 447

Query: 174 IPG------------------DEGKRGPKGD---------------------------MG 188
             G                  +EG  G KG                            +G
Sbjct: 448 PRGFTGPRGLPGVPGPPGIPGNEGSAGSKGQAGPPGSPGAPGLVGPPGAVGPPGPHGLLG 507

Query: 189 YPGRIGLDGRDGLPGEPGLDGIP------------GRNGMDGIPGKDGLP---------G 227
            PG +G  G+ G+PG PG DG P            G  G+ G  G  G P         G
Sbjct: 508 PPGVMGPHGKPGIPGLPGADGAPGSPGSPGAMGPKGEQGLAGPAGPVGFPGPRGVKGDEG 567

Query: 228 KDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLL 284
           K GI G  G  G++G+ G +G+   +G  G+ G+PG P +   +       P  ET  + 
Sbjct: 568 KRGILGEKGDKGDRGLEGEKGDLGMKGSVGLVGLPGIPGLEGPEGPKGFDGPRGETGNVG 627

Query: 285 IP 286
           +P
Sbjct: 628 LP 629



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/108 (46%), Positives = 61/108 (56%)

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            +PG  G  GP G  G  GP G  GD G+ GP G  G  G  GL G  G PG  G  G+ G
Sbjct: 1156 LPGKTGLDGPAGLQGPSGPPGEKGDIGEIGPPGPQGMTGPQGLPGPQGPPGLTGAPGVAG 1215

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             NG  G PG  G PGK G PG  G  G++G  GP+G+RG+ G++G+ G
Sbjct: 1216 ENGAPGSPGLTGSPGKTGSPGPAGQKGDRGRRGPKGHRGEMGLSGIKG 1263



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 96/219 (43%), Gaps = 72/219 (32%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------KRGPKGD 165
           +G+KG+ G+ G++G  GE+G++G PG    PG +G PG  G            ++GPKGD
Sbjct: 647 LGEKGDKGSSGKIGDNGEKGDRGNPGT---PGERGEPGPRGFRGSRGRRGRAGQQGPKGD 703

Query: 166 MGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP-------------- 205
            G PGP      +GIPG EG   P+G  G PG  G++G+DG PG P              
Sbjct: 704 TGQPGPPGPQGERGIPGPEG---PRGFAGAPGPPGINGKDGHPGSPGERGPPGEPGKPGM 760

Query: 206 ----------------------------------GLDGIPGRNGMDGIPGKDGLPGKDGI 231
                                             GL G  G+ G  G PG +G PG +G 
Sbjct: 761 VGPPGVIGPPGPTGEVGPIGEHGPPGLPGVPGEAGLPGEAGKEGAPGSPGPEGKPGPEGP 820

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G  G  GE+G+TG  G  G  G  G PG P +   K +
Sbjct: 821 TGLPGFPGERGLTGLPGIPGLKGDTGPPGAPGVTGDKGQ 859



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 89/189 (47%), Gaps = 39/189 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G++G  G++G +G KG+ G +G  GEKG  G+ G  G  G+PG  G  GP+G  G+ G
Sbjct: 559 PRGVKGDEGKRGILGEKGDKGDRGLEGEKGDLGMKGSVGLVGLPGIPGLEGPEGPKGFDG 618

Query: 171 PQG------IPGDEGKR------------GPKGDMGYPGRIGLDGRD---GLPGEPGLDG 209
           P+G      +PG++GK             G KGD G  G+IG +G     G PG PG  G
Sbjct: 619 PRGETGNVGLPGEKGKDGPPGLPGYPGNLGEKGDKGSSGKIGDNGEKGDRGNPGTPGERG 678

Query: 210 IP------------------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            P                  G  G  G PG  G  G+ GIPG  G  G  G  GP G  G
Sbjct: 679 EPGPRGFRGSRGRRGRAGQQGPKGDTGQPGPPGPQGERGIPGPEGPRGFAGAPGPPGING 738

Query: 252 KSGINGVPG 260
           K G  G PG
Sbjct: 739 KDGHPGSPG 747



 Score = 47.4 bits (111), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 85/214 (39%), Gaps = 78/214 (36%)

Query: 125 GAKGEMGVKGERGEKGAPG------------------VVGPPGPQG---------IPGDE 157
           G  G++G  G  GEKG PG                  + GPPGP+G         +PGD+
Sbjct: 351 GEPGDLGEPGPMGEKGLPGNPGREGRRGRPGRDGERGITGPPGPKGEQGLLGLPGLPGDK 410

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG------------------RD 199
           G+RG  G +G PG +G  G +G+ GP G  G PG +G  G                   +
Sbjct: 411 GERGLPGLVGEPGLRGHDGMQGEEGPPGLSGMPGEMGPRGFTGPRGLPGVPGPPGIPGNE 470

Query: 200 GLPGEPG---------------------------LDGIPG------RNGMDGIPGKDGLP 226
           G  G  G                           L G PG      + G+ G+PG DG P
Sbjct: 471 GSAGSKGQAGPPGSPGAPGLVGPPGAVGPPGPHGLLGPPGVMGPHGKPGIPGLPGADGAP 530

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G PG  G  GE+G+ GP G  G  G  GV G
Sbjct: 531 GSPGSPGAMGPKGEQGLAGPAGPVGFPGPRGVKG 564



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 99/268 (36%), Gaps = 96/268 (35%)

Query: 88  LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK------------GE 135
           L     + LV + G         P G  GP G+ G +G  GE G              GE
Sbjct: 590 LGMKGSVGLVGLPGIPGLEGPEGPKGFDGPRGETGNVGLPGEKGKDGPPGLPGYPGNLGE 649

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG------------KRGP 183
           +G+KG+ G +G         D G++G +G+ G PG +G PG  G            ++GP
Sbjct: 650 KGDKGSSGKIG---------DNGEKGDRGNPGTPGERGEPGPRGFRGSRGRRGRAGQQGP 700

Query: 184 KGDM------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK--------- 222
           KGD             G PG  G  G  G PG PG++G   ++G  G PG+         
Sbjct: 701 KGDTGQPGPPGPQGERGIPGPEGPRGFAGAPGPPGING---KDGHPGSPGERGPPGEPGK 757

Query: 223 ------------------------------------DGLP---GKDGIPGTNGTNGEKGM 243
                                                GLP   GK+G PG+ G  G+ G 
Sbjct: 758 PGMVGPPGVIGPPGPTGEVGPIGEHGPPGLPGVPGEAGLPGEAGKEGAPGSPGPEGKPGP 817

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRES 271
            GP G  G  G  G+ G P I   K ++
Sbjct: 818 EGPTGLPGFPGERGLTGLPGIPGLKGDT 845


>gi|388714|gb|AAA89196.1| type VII collagen, partial [Homo sapiens]
          Length = 550

 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 94/188 (50%), Gaps = 46/188 (24%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGDEGKRGPKGDMGYP 169
           P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G          KGDMG  
Sbjct: 97  PRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGA---------KGDMGER 147

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP------------GRNGMD 217
           GP+G+ GD   +GP+GD G PG  G        GEPG  G              G+ G  
Sbjct: 148 GPRGLDGD---KGPRGDNGDPGDKGSK------GEPGDKGSAGLPGLRGLLGPQGQPGAA 198

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV---------------PGTP 262
           GIPG  G PGKDG+PG  G  G+ G  GPRG +G+ G+ G                PG P
Sbjct: 199 GIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRP 258

Query: 263 AICAYKRE 270
            +  +K E
Sbjct: 259 GLAGHKGE 266



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 92/171 (53%), Gaps = 21/171 (12%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------------PGVVGPPGPQG 152
           E  P GL G  G +G+ G  G+ G KGE G+KG+               PG  G PG  G
Sbjct: 146 ERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPG 205

Query: 153 IPGDEGK---RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            PG +G    RG KGD+G+ GP+G+   +G+RG KG  G  G  G  G  G PG PGL G
Sbjct: 206 SPGKDGVPGIRGEKGDVGFMGPRGL---KGERGVKGACGLDGEKGDKGEAGPPGRPGLAG 262

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G+PG+ G PGK+G+ G  G  G  G  GP+G++G+ G  G PG
Sbjct: 263 HKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 313



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 107/259 (41%), Gaps = 37/259 (14%)

Query: 25  PIISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNP 84
           P  +K ++  R  R +D DKG   DN  P     +  P D         +          
Sbjct: 137 PRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPG 196

Query: 85  WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
              +      P     G      E    G  GP G KGE G KG  G+ GE+G+KG    
Sbjct: 197 AAGIPGDPGSP--GKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGE--- 251

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            GPPG    PG  G +G  G+ G PG  G PG EG  GPKGD G+ G+ G  G  G  GE
Sbjct: 252 AGPPG---RPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGE 308

Query: 205 ---PGLDGIPGRNGMD---------------------GIPGKDGLPGKD-----GIPGTN 235
              PG+ G PG +G D                     G  G+ G PG+      G+PG  
Sbjct: 309 RGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAP 368

Query: 236 GTNGEKGMTGPRGNRGKSG 254
           G  GE+G  GP G RG+ G
Sbjct: 369 GERGEQGRPGPAGPRGEKG 387



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 77/163 (47%), Gaps = 32/163 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  G KGE G  G  G+ G +GE G PGV   PG  G PG EG  GPKGD G+    
Sbjct: 241 GLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGV---PGQSGAPGKEGLIGPKGDRGF---- 293

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD------------------GIPGRN 214
                +G+ GPKGD G  G  G  G  G PG  G D                  G+ G+ 
Sbjct: 294 -----DGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQK 348

Query: 215 GMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G  G PG+   G PG  G PG  G  G  G  GPRG +G++ +
Sbjct: 349 GERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAAL 391



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 74/157 (47%), Gaps = 29/157 (18%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGP------- 147
            ++G C    E    G  GP G+ G  G KGEMG  G  G+ GAPG   ++GP       
Sbjct: 235 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 294

Query: 148 --PGPQGIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRGPKGDMGYP 190
             PGP+G  G++G+RG  G  G+PGP G                 G EG +G KG+ G P
Sbjct: 295 GQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPP 354

Query: 191 GR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           G   +G  G  G PGE G  G PG  G  G  G+  L
Sbjct: 355 GERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAAL 391



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 68/143 (47%), Gaps = 40/143 (27%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKR--------------- 181
           GAPGVVG P         G+ GP+G+MG PGP   +G+ G  G+                
Sbjct: 4   GAPGVVGFP---------GQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSV 54

Query: 182 ------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                 G KGD G PG +GL G  G  GEPG+       G DG PG++G  G  G PG+ 
Sbjct: 55  GPPGASGLKGDKGDPG-VGLPGPRGERGEPGI------RGEDGRPGQEGPRGLTGPPGSR 107

Query: 236 GTNGEKGMTGPRGNRGKSGINGV 258
           G  GEKG  G  G +G  G + V
Sbjct: 108 GERGEKGDVGSAGLKGDKGDSAV 130



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 76/168 (45%), Gaps = 32/168 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ-------------------- 151
           PG  G +G  G+ G +GEMG  G  GE+G   + GPPG +                    
Sbjct: 3   PGAPGVVGFPGQTGPRGEMGQPGPSGERG---LAGPPGREGIPGPLGPPGPPGSVGPPGA 59

Query: 152 -GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+ GD+G  G    +G PGP+G  G+ G RG  G  G  G  GL G  G  GE G  G 
Sbjct: 60  SGLKGDKGDPG----VGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGD 115

Query: 211 PGRNGMDGIPGKD----GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G  G+ G  G      G PG  G  G  G  G +G+ G +G RG +G
Sbjct: 116 VGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNG 163


>gi|297669024|ref|XP_002812712.1| PREDICTED: collagen alpha-2(V) chain [Pongo abelii]
          Length = 1499

 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 326

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 387 GEAGPTGARGPEGPQGQRGET 407



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 88/219 (40%), Gaps = 72/219 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
            G  G+PG   K GP G +G PG  G  G  G+ GE G                      
Sbjct: 356 RGAHGMPG---KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412

Query: 207 -----------LDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
                       DG PG  G  G PG                          G PG  G+
Sbjct: 413 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 472

Query: 232 PGTNGTNGEKGMTGPR---------GNRGKSGINGVPGT 261
           PG  G  G KG  GP          G  GK G  G PGT
Sbjct: 473 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT 511



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 272 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 332 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 392 TGARGPEGPQGQRG 405



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 210 IPGRNG 215
            PG +G
Sbjct: 946 DPGSHG 951


>gi|89363017|ref|NP_000384.2| collagen alpha-2(V) chain preproprotein [Homo sapiens]
 gi|426338028|ref|XP_004032994.1| PREDICTED: collagen alpha-2(V) chain [Gorilla gorilla gorilla]
 gi|143811378|sp|P05997.3|CO5A2_HUMAN RecName: Full=Collagen alpha-2(V) chain; Flags: Precursor
 gi|168277404|dbj|BAG10680.1| collagen alpha-2(V) chain precursor [synthetic construct]
          Length = 1499

 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 326

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 387 GEAGPTGARGPEGPQGQRGET 407



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 88/219 (40%), Gaps = 72/219 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
            G  G+PG   K GP G +G PG  G  G  G+ GE G                      
Sbjct: 356 RGAHGMPG---KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412

Query: 207 -----------LDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
                       DG PG  G  G PG                          G PG  G+
Sbjct: 413 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 472

Query: 232 PGTNGTNGEKGMTGPR---------GNRGKSGINGVPGT 261
           PG  G  G KG  GP          G  GK G  G PGT
Sbjct: 473 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT 511



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 272 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 332 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 392 TGARGPEGPQGQRG 405



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 210 IPGRNG 215
            PG +G
Sbjct: 946 DPGSHG 951


>gi|295815591|gb|ADG36303.1| collagen type V alpha-1 [Danio rerio]
          Length = 2010

 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 82/156 (52%), Gaps = 9/156 (5%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G QGPIG  G  G KG  GV+G +G KG  G  G PG     GD G +G KG++G  G
Sbjct: 949  PHGPQGPIGYPGPRGVKGADGVRGLKGNKGEKGEDGFPG---FKGDMGVKGDKGELGAAG 1005

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            P+G  G EG +G  G  G PG +G  G  G  G PGL G PGR G  G  G  G  G  G
Sbjct: 1006 PRGEDGPEGPKGRSGLPGDPGPLGPLGEKGKLGVPGLPGYPGRQGPKGSQGFQGFQGTSG 1065

Query: 231  IPGTNGT------NGEKGMTGPRGNRGKSGINGVPG 260
              GT GT       G++G TGPRG RG  G  G  G
Sbjct: 1066 EKGTRGTAGKPGPRGQRGPTGPRGERGPRGPTGKAG 1101



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 84/155 (54%), Gaps = 9/155 (5%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+ G  G  G  G +G  G KG  G  G  G +G PGP+G+ G +G RG KG+ G  G 
Sbjct: 923  PGMPGADGPPGHPGKEGPSGEKGNLGPHGPQGPIGYPGPRGVKGADGVRGLKGNKGEKGE 982

Query: 172  QGIP---GDEGKRGPKGDMGYPGRIGLD------GRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G P   GD G +G KG++G  G  G D      GR GLPG+PG  G  G  G  G+PG 
Sbjct: 983  DGFPGFKGDMGVKGDKGELGAAGPRGEDGPEGPKGRSGLPGDPGPLGPLGEKGKLGVPGL 1042

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G PG+ G  G+ G  G +G +G +G RG +G  G
Sbjct: 1043 PGYPGRQGPKGSQGFQGFQGTSGEKGTRGTAGKPG 1077



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 75/141 (53%), Gaps = 6/141 (4%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            E G  G+ G+ G  G  G PG  G  GP G  G+ G  GP+G +GYPGP+G+ G +G RG
Sbjct: 913  EKGPTGKPGLPGMPGADGPPGHPGKEGPSGEKGNLGPHGPQGPIGYPGPRGVKGADGVRG 972

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             KG+ G        G DG PG  G  G+ G  G  G  G  G  G +G  G +G  G+ G
Sbjct: 973  LKGNKGE------KGEDGFPGFKGDMGVKGDKGELGAAGPRGEDGPEGPKGRSGLPGDPG 1026

Query: 243  MTGPRGNRGKSGINGVPGTPA 263
              GP G +GK G+ G+PG P 
Sbjct: 1027 PLGPLGEKGKLGVPGLPGYPG 1047



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 74/146 (50%), Gaps = 21/146 (14%)

Query: 113  GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPK 163
            GL+G  G+KGE    G KG+MGVKG++GE GA G  G  GP+      G+PGD G  GP 
Sbjct: 972  GLKGNKGEKGEDGFPGFKGDMGVKGDKGELGAAGPRGEDGPEGPKGRSGLPGDPGPLGPL 1031

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G+ G  G  G+PG  G++GPKG  G+ G  G  G  G              G  G PG  
Sbjct: 1032 GEKGKLGVPGLPGYPGRQGPKGSQGFQGFQGTSGEKGT------------RGTAGKPGPR 1079

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G  G  G  G  G  G  G  GP+GN
Sbjct: 1080 GQRGPTGPRGERGPRGPTGKAGPKGN 1105



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 101/254 (39%), Gaps = 78/254 (30%)

Query: 99   MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------ 152
            + G    + E  P G +GP+G  G  G  G  G  G  G +G PG  GP G +G      
Sbjct: 748  VSGLKGESGESGPQGPRGPMGSAGPTGKPGRRGRPGSDGARGMPGQTGPKGDRGFDGLAG 807

Query: 153  IPGDEGKRGP---------------KGDMGYPGPQGIPGDEGKRG--------------- 182
            +PG++G RG                +GD G  GP+G+PG+ G RG               
Sbjct: 808  LPGEKGHRGETGPQGPPGPSGEDGERGDDGEVGPRGLPGEPGPRGVLGPKGPQGPPGPPG 867

Query: 183  ---------PKGDMGY------------PGRIGLD---------------GRDGLPGEPG 206
                     PKG++G             PG  GL+               G+ GLPG PG
Sbjct: 868  VTGMDGHPGPKGNIGPQGEPGPPGQQGNPGAQGLNGPQGPIGPPGEKGPTGKPGLPGMPG 927

Query: 207  LDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             DG PG  G +G  G+       G  G  G PG  G  G  G+ G +GN+G+ G +G PG
Sbjct: 928  ADGPPGHPGKEGPSGEKGNLGPHGPQGPIGYPGPRGVKGADGVRGLKGNKGEKGEDGFPG 987

Query: 261  TPAICAYKRESCSL 274
                   K +   L
Sbjct: 988  FKGDMGVKGDKGEL 1001



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/131 (41%), Positives = 67/131 (51%), Gaps = 30/131 (22%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG-- 173
            GP G++GE GAKGE G++G       PG  GP GPQG P   GK GP+G  G PGP G  
Sbjct: 1569 GPEGRQGEKGAKGESGLEG------PPGKTGPVGPQGSP---GKPGPEGLRGVPGPVGEQ 1619

Query: 174  -------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                               +PG +G  G KG+ G+PG IGL G  G  GE G  G+PG  
Sbjct: 1620 GLPGAPGPDGPPGPMGPPGLPGLKGDLGIKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQ 1679

Query: 215  GMDGIPGKDGL 225
            G  G  G +G+
Sbjct: 1680 GTSGPKGDNGI 1690



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPG 212
            ++G  G  G  G PG  G PG  GK GP G+ G  G  G  G  G PG  G+   DG+ G
Sbjct: 913  EKGPTGKPGLPGMPGADGPPGHPGKEGPSGEKGNLGPHGPQGPIGYPGPRGVKGADGVRG 972

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
              G  G  G+DG PG  G  G  G  GE G  GPRG  G  G  G  G P       +  
Sbjct: 973  LKGNKGEKGEDGFPGFKGDMGVKGDKGELGAAGPRGEDGPEGPKGRSGLPG------DPG 1026

Query: 273  SLLPNSETSQLLIP 286
             L P  E  +L +P
Sbjct: 1027 PLGPLGEKGKLGVP 1040



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 71/149 (47%), Gaps = 23/149 (15%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEG-------KRGPKGDMGYPGPQGIPGDEGK------ 180
           GE GE+G PG  G PG  G+PG  G       +    GD G  GP  +   E +      
Sbjct: 663 GEPGERGLPGRAGLPGADGLPGPPGTVLMLPFRMSTGGDGGQKGPA-VSAQEAQMQAIMQ 721

Query: 181 ------RGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                 RGP G MG  GR G  G     GL GE G  G  G  G  G  G  G PG+ G 
Sbjct: 722 QARLAMRGPTGPMGLTGRPGPLGPPGVSGLKGESGESGPQGPRGPMGSAGPTGKPGRRGR 781

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG++G  G  G TGP+G+RG  G+ G+PG
Sbjct: 782 PGSDGARGMPGQTGPKGDRGFDGLAGLPG 810



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP+G+KG++G  G  G  G +G KG+ G       QG  G  G++G +G  G PGP
Sbjct: 1025 PGPLGPLGEKGKLGVPGLPGYPGRQGPKGSQGF------QGFQGTSGEKGTRGTAGKPGP 1078

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDG 197
            +G  G  G RG +G  G  G+ G  G
Sbjct: 1079 RGQRGPTGPRGERGPRGPTGKAGPKG 1104



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 9/75 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G++G  G++G  G +G  GEKG  G  G PGP+      G+RGP G  G  GP
Sbjct: 1040 PGLPGYPGRQGPKGSQGFQGFQGTSGEKGTRGTAGKPGPR------GQRGPTGPRGERGP 1093

Query: 172  QGIPGDEGKRGPKGD 186
            +G     GK GPKG+
Sbjct: 1094 RGP---TGKAGPKGN 1105



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 33/122 (27%)

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---LDGIPGRNGMD--------- 217
            GP+G  G++G +G  G  G PG+ G  G  G PG+PG   L G+PG  G           
Sbjct: 1569 GPEGRQGEKGAKGESGLEGPPGKTGPVGPQGSPGKPGPEGLRGVPGPVGEQGLPGAPGPD 1628

Query: 218  ------------------GIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGIN 256
                              GI G+ G PG  G+   PG  G  G++G+ GP+G  G  G N
Sbjct: 1629 GPPGPMGPPGLPGLKGDLGIKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGTSGPKGDN 1688

Query: 257  GV 258
            G+
Sbjct: 1689 GI 1690


>gi|2598719|dbj|BAA23309.1| Type XIX collagen a1 chain [Homo sapiens]
          Length = 1143

 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 91/200 (45%), Gaps = 58/200 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  GP GQKGE    GE   KGE+G++G PGV+G                       G 
Sbjct: 471 PGSVGPKGQKGE---PGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQ 527

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK----------------GDMGYPGRIG 194
           QG  G  G RGP GD+G PG  GIPG +G +G K                G+ G PG+  
Sbjct: 528 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKS- 586

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGM 243
                 LPGEPGLDG PG  G  G  G+ GLPG             GIPG  G  G  G 
Sbjct: 587 ------LPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGE 640

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            G +G RG  G+ G PGTP 
Sbjct: 641 PGIQGPRGLPGLPGTPGTPG 660



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 82/196 (41%), Gaps = 62/196 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  G +G KG+ G  GE   KGE+G++G PGV+G                       G 
Sbjct: 468 PGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQ 527

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK-------------------GDMG--Y 189
           QG  G  G RGP GD+G PG  GIPG +G +G K                   G  G   
Sbjct: 528 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKSL 587

Query: 190 PGRIGLDGRDGLPGE---------PGLDG-----------IPGRNGMDGIPGKDGLPGKD 229
           PG  GLDG  G PG          PG+ G           IPGR G  G  G+ G+ G  
Sbjct: 588 PGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGEPGIQGPR 647

Query: 230 GIPGTNGTNGEKGMTG 245
           G+PG  GT G  G  G
Sbjct: 648 GLPGLPGTPGTPGNDG 663



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 70/147 (47%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG----------------EK 139
           L   QG   S     PPG    +G  GE G  G+ G+KGE+G                E 
Sbjct: 524 LKGQQGSAGSMGPRGPPG---DVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEA 580

Query: 140 GAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPG---------PQGI--PGDEGKRGPKGD 186
           G PG  + G PG  G PG  G RGPKG+ G PG         PQGI  PG  G +GP G+
Sbjct: 581 GPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGE 640

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG+PGR
Sbjct: 641 PGIQGPRGLPGLPGTPGTPGNDGVPGR 667



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 78/145 (53%), Gaps = 15/145 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G +G  GVKG+RG  G PG+ G       PGP G+PG+ G+RGP GD+G+PGP+
Sbjct: 861 GAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGPE 920

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                    GP G  G  G+ G+ G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 921 ---------GPSGKPGINGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGDRGSQGERGKP 971

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G  GP GN+G  G  G
Sbjct: 972 GLTGMKGAIGPMGPPGNKGSMGSPG 996



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 78/168 (46%), Gaps = 33/168 (19%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A G  G KGE G  G PG VGP G +G PG+   +G KGD G PG  G  G +G+ G  G
Sbjct: 455 AGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPG 514

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI-------------- 231
             G  G  GL G+ G  G  G  G PG  G+   PG+ G+PGK GI              
Sbjct: 515 PPGLIGSPGLKGQQGSAGSMGPRGPPGDVGL---PGEHGIPGKQGIKGEKGDPGGIIGPP 571

Query: 232 ----------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                           PG  G +G  G  GPRG +G+ G+ GV G+P 
Sbjct: 572 GLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPG 619



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 61/131 (46%), Gaps = 36/131 (27%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
           PG  G+PG EG  G KGD G  GP GI G               + G+RGP GD+G+PG 
Sbjct: 860 PGAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGP 919

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGN 249
            G  G+ G                  I GKDG+PG  GI   PG  G  GE+G  G  G+
Sbjct: 920 EGPSGKPG------------------INGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGD 961

Query: 250 RGKSGINGVPG 260
           RG  G  G PG
Sbjct: 962 RGSQGERGKPG 972



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 92/239 (38%), Gaps = 80/239 (33%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGD 165
           PG  G  G++G  G+KGE G KGE+GEKG P + G  G  G+ GD       G +G KGD
Sbjct: 322 PGFPGQKGEQGFEGSKGETGEKGEQGEKGDPALAGLNGENGLKGDLGPHGPPGPKGEKGD 381

Query: 166 ------------MGYPGPQGIPGDEGKRGP------------------------------ 183
                       +G  GPQG PG EG+RG                               
Sbjct: 382 TGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLGG 441

Query: 184 -----------------KGDMG------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                            KGD G      +PG +G  G+ G PGEP   G  G  G  G+ 
Sbjct: 442 YYNKDNKGNDEHEAGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVI 501

Query: 221 GKDGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G+ G+          G PG  G  G  G  GPRG  G  G+ G  G P     K E
Sbjct: 502 GSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGE 560



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 25/142 (17%)

Query: 68  EIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEY-----CPPGLQGPIGQKG 122
           EI + +  +Q+   N    W+ A++      M  +  + +E      C P        KG
Sbjct: 245 EISDTKCPEQDGFGNIASSWVTAHAS----KMSSYLPAKQELKDQCQCIP-------NKG 293

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           E G  G  G  G++G KG PG  G  G  G PG       KG+ G+ G +G  G++G++G
Sbjct: 294 EAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQ------KGEQGFEGSKGETGEKGEQG 347

Query: 183 PKGDMGYPGRIGLDGRDGLPGE 204
            KGD   P   GL+G +GL G+
Sbjct: 348 EKGD---PALAGLNGENGLKGD 366



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G PG    PG  G++G KG+   PG  GL G  G PG+ G  G  G  G  G  G+
Sbjct: 292 KGEAGLPG---APGSPGQKGHKGE---PGENGLHGAPGFPGQKGEQGFEGSKGETGEKGE 345

Query: 223 DGLPGKDGIPGTNGTNGEKG 242
            G  G   + G NG NG KG
Sbjct: 346 QGEKGDPALAGLNGENGLKG 365



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G++G+ G  G+ G +GERG+ G  G+ G  GP G PG+      KG MG PG 
Sbjct: 944 PGDRGPKGERGDQGIPGDRGSQGERGKPGLTGMKGAIGPMGPPGN------KGSMGSPGH 997

Query: 172 Q 172
           Q
Sbjct: 998 Q 998



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 34/69 (49%)

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE GL G PG  G  G  G+ G  G  G PG  G  GE+G  G +G  G+ G  G  G P
Sbjct: 293 GEAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQKGEQGFEGSKGETGEKGEQGEKGDP 352

Query: 263 AICAYKRES 271
           A+     E+
Sbjct: 353 ALAGLNGEN 361


>gi|326666588|ref|XP_001341247.4| PREDICTED: collagen alpha-1(VII) chain [Danio rerio]
          Length = 641

 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 96/185 (51%), Gaps = 12/185 (6%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G   +     P G +GP+GQKG+ G  G  G KG  GE G  G       +G  GD 
Sbjct: 394 GLKGEAGTKGGMGPFGARGPVGQKGDPGEPGANGEKGRNGEHGLDGE------KGDKGDT 447

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDGIPGRN 214
           G +G KGD G  G  G+PGD G +G KG  G+PGRI   GLDG  G  G+PG  G+PG N
Sbjct: 448 GVQGRKGDQGETGEPGLPGDTGIKGEKGFRGFPGRIGSPGLDGEQGDHGDPGRPGLPGLN 507

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G+ G  G+ G  G +G+ G  G  GEKG+T   G  G SG  G PGTP           +
Sbjct: 508 GLPGRKGEKGDSGLNGLDGAPGQKGEKGVT---GFAGFSGFKGSPGTPGTNGPSGRPGPV 564

Query: 275 LPNSE 279
            P  E
Sbjct: 565 GPKGE 569



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 91/182 (50%), Gaps = 22/182 (12%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP-GVVGPPGPQGIP 154
           L   +G   +     PPG  GP G  G  G KG+ G+ G RGEKG+P  + GP G +G+ 
Sbjct: 307 LPGRRGAKGTDGNKGPPGHMGPKGLTGAKGEKGDKGMSGHRGEKGSPLSMPGPRGYKGLK 366

Query: 155 GDEGKRG------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GD G+RG       KG+ G  GP G  G +G+ G KG MG  G  G  G+ G PGEPG +
Sbjct: 367 GDTGERGLPGFDGDKGEKGEDGPPGAKGLKGEAGTKGGMGPFGARGPVGQKGDPGEPGAN 426

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  GRNG  G+               +G  G+KG TG +G +G  G  G PG P     K
Sbjct: 427 GEKGRNGEHGL---------------DGEKGDKGDTGVQGRKGDQGETGEPGLPGDTGIK 471

Query: 269 RE 270
            E
Sbjct: 472 GE 473



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 81/159 (50%), Gaps = 25/159 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GPIGQ G+ G K  +G  GE G  GA G+ G  G  GIPG  G+RG  GD G PG Q
Sbjct: 198 GHRGPIGQAGQAGQK--VGEPGEPGPTGAQGIQGIRGNPGIPGSVGQRGQPGDPGEPGRQ 255

Query: 173 GIPGDEGKRGPKGDMGYPGR------------IGLDGRDG--LPGEPGL---DGIPGRNG 215
              GD GKRG  G  G  G              G+ G  G  +PGEPG     G+PGR G
Sbjct: 256 ---GDRGKRGKNGSAGAQGAIGPPGQPGPPGLAGVKGEKGDSIPGEPGDRGNSGLPGRRG 312

Query: 216 MDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRGNRG 251
             G  G  G PG     G+ G  G  G+KGM+G RG +G
Sbjct: 313 AKGTDGNKGPPGHMGPKGLTGAKGEKGDKGMSGHRGEKG 351



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 84/182 (46%), Gaps = 29/182 (15%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
             +QG      E   PGL G              G+KGE+G +G PG +G P   G+ G+
Sbjct: 447 TGVQGRKGDQGETGEPGLPGDT------------GIKGEKGFRGFPGRIGSP---GLDGE 491

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G  G  G  G PG  G+P   G++G KGD       GL+G DG PG+ G  G+ G  G 
Sbjct: 492 QGDHGDPGRPGLPGLNGLP---GRKGEKGDS------GLNGLDGAPGQKGEKGVTGFAGF 542

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN-----GVPGTPAICAYKRES 271
            G  G  G PG +G  G  G  G KG  GP+G +G+ G       G PG P +     E 
Sbjct: 543 SGFKGSPGTPGTNGPSGRPGPVGPKGEMGPKGEKGRRGRGKACQRGPPGIPGLRGLDGEE 602

Query: 272 CS 273
            S
Sbjct: 603 GS 604



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 89/199 (44%), Gaps = 45/199 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------PGPQG- 152
           PG+ G +GQ+G+ G  GE G +G+RG++G  G  G                    G +G 
Sbjct: 234 PGIPGSVGQRGQPGDPGEPGRQGDRGKRGKNGSAGAQGAIGPPGQPGPPGLAGVKGEKGD 293

Query: 153 -IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----------- 200
            IPG+ G R   G+ G PG +G  G +G +GP G MG  G  G  G  G           
Sbjct: 294 SIPGEPGDR---GNSGLPGRRGAKGTDGNKGPPGHMGPKGLTGAKGEKGDKGMSGHRGEK 350

Query: 201 -----LPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGE---KGMTGPRGN 249
                +PG  G  G+ G  G  G+PG D   G  G+DG PG  G  GE   KG  GP G 
Sbjct: 351 GSPLSMPGPRGYKGLKGDTGERGLPGFDGDKGEKGEDGPPGAKGLKGEAGTKGGMGPFGA 410

Query: 250 RGKSGINGVPGTPAICAYK 268
           RG  G  G PG P     K
Sbjct: 411 RGPVGQKGDPGEPGANGEK 429



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 2/96 (2%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG-RIGLDGRDGLPGEPGLDG 209
           +G PG+ GK GPKG++G  G +G PG  G RGP G  G  G ++G  G  G  G  G+ G
Sbjct: 171 KGPPGENGKPGPKGEIGEKGQKGEPGT-GHRGPIGQAGQAGQKVGEPGEPGPTGAQGIQG 229

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           I G  G+ G  G+ G PG  G PG  G  G++G  G
Sbjct: 230 IRGNPGIPGSVGQRGQPGDPGEPGRQGDRGKRGKNG 265



 Score = 39.7 bits (91), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 61/136 (44%), Gaps = 11/136 (8%)

Query: 77  QNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER 136
           +   H +P        R  L  + G      E    GL G  G  G+ G KG  G  G  
Sbjct: 491 EQGDHGDP-------GRPGLPGLNGLPGRKGEKGDSGLNGLDGAPGQKGEKGVTGFAGFS 543

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           G KG+PG  G  GP G P   G  GPKG+MG  G +G  G  GK   +G  G PG  GLD
Sbjct: 544 GFKGSPGTPGTNGPSGRP---GPVGPKGEMGPKGEKGRRG-RGKACQRGPPGIPGLRGLD 599

Query: 197 GRDGLPGEPGLDGIPG 212
           G +G  G  G  G PG
Sbjct: 600 GEEGSSGTKGEKGDPG 615


>gi|115326|sp|P08125.4|COAA1_CHICK RecName: Full=Collagen alpha-1(X) chain; Flags: Precursor
          Length = 674

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 67/115 (58%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GP G+PG+ G  GP+G+MG  G +G+PG+ G  GPKGDMG  G  G  G  G  G PGLD
Sbjct: 319 GPAGVPGELGPAGPQGNMGPQGLKGLPGENGLPGPKGDMGPVGPAGFPGAKGERGLPGLD 378

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G PG  G  G+PG  G PG  G  G  G  G  G+ GP G +G  G+ G+ G P 
Sbjct: 379 GKPGYPGEQGLPGPKGHPGLPGQKGDTGHAGHPGLPGPVGPQGVKGVPGINGEPG 433



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 81/157 (51%), Gaps = 18/157 (11%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG- 185
           +G  GV GE G  G  G +GP G +G+PG+ G  GPKGDMG  GP G PG +G+RG  G 
Sbjct: 318 QGPAGVPGELGPAGPQGNMGPQGLKGLPGENGLPGPKGDMGPVGPAGFPGAKGERGLPGL 377

Query: 186 --DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
               GYPG  GL G  G PG PG  G  G  G  G+PG  G  G  G+PG NG  G +G 
Sbjct: 378 DGKPGYPGEQGLPGPKGHPGLPGQKGDTGHAGHPGLPGPVGPQGVKGVPGINGEPGPRGP 437

Query: 244 TGPRGNR---------------GKSGINGVPGTPAIC 265
           +G  G R               G++G  G+PG   I 
Sbjct: 438 SGIPGVRGPIGPPGMPGAPGAKGEAGAPGLPGPAGIV 474



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 89/219 (40%), Gaps = 68/219 (31%)

Query: 112 PGLQGP--------IGQKGEIGAKGEMGVKGERGEKGAPGVV------------------ 145
           PG QGP        IG+ GE G  G+ G+KG+RG  GA G                    
Sbjct: 198 PGPQGPQGLPGSAGIGKPGENGLPGQPGMKGDRGLPGARGEAGIPGPQGPPGEPGEVGIG 257

Query: 146 -----------------GPPGPQGIPGDEGKRGPKGDMGYPG------------------ 170
                            G PGP G+PG  G  G  G  G PG                  
Sbjct: 258 KPGPMGPPGPAGIPGAKGLPGPAGLPGSPGLPG-FGKPGLPGMKGHRGPEGPPGFPGPKG 316

Query: 171 ---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
              P G+PG+ G  GP+G+MG  G  GL G +GLPG  G  G  G  G  G  G+ GLPG
Sbjct: 317 DQGPAGVPGELGPAGPQGNMGPQGLKGLPGENGLPGPKGDMGPVGPAGFPGAKGERGLPG 376

Query: 228 KD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            D   G PG  G  G KG  G  G +G +G  G PG P 
Sbjct: 377 LDGKPGYPGEQGLPGPKGHPGLPGQKGDTGHAGHPGLPG 415



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 74/184 (40%), Gaps = 70/184 (38%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD--GRDGLPG 203
           GPPG +G PG  G  G KG+MG+ G  G PG+ G  GP+G  G PG  G+   G +GLPG
Sbjct: 164 GPPGEKGEPGVPGINGQKGEMGF-GVPGRPGNRGLPGPQGPQGLPGSAGIGKPGENGLPG 222

Query: 204 EPGLDG---IPGRNG-----------------------------------MDGIPGKDGL 225
           +PG+ G   +PG  G                                     G+PG  GL
Sbjct: 223 QPGMKGDRGLPGARGEAGIPGPQGPPGEPGEVGIGKPGPMGPPGPAGIPGAKGLPGPAGL 282

Query: 226 PGKDGIPGTN-----------------------------GTNGEKGMTGPRGNRGKSGIN 256
           PG  G+PG                               G  GE G  GP+GN G  G+ 
Sbjct: 283 PGSPGLPGFGKPGLPGMKGHRGPEGPPGFPGPKGDQGPAGVPGELGPAGPQGNMGPQGLK 342

Query: 257 GVPG 260
           G+PG
Sbjct: 343 GLPG 346



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 47/149 (31%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKG-------------------------------- 164
           G+ G PG+ G PG +G+ G++G+ GP G                                
Sbjct: 99  GKLGMPGLPGKPGERGLNGEKGEAGPVGLPGARGPQGPPGIPGPAGLSVLGKPGPQGPPG 158

Query: 165 ---DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                G PG +G PG  G  G KG+MG+          G+PG PG  G+PG  G  G+PG
Sbjct: 159 AQGPRGPPGEKGEPGVPGINGQKGEMGF----------GVPGRPGNRGLPGPQGPQGLPG 208

Query: 222 KDGL--PGKDGIPGTNGTNGEKGMTGPRG 248
             G+  PG++G+PG  G  G++G+ G RG
Sbjct: 209 SAGIGKPGENGLPGQPGMKGDRGLPGARG 237


>gi|410969052|ref|XP_003991011.1| PREDICTED: collagen alpha-2(V) chain [Felis catus]
          Length = 1499

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 97/236 (41%), Gaps = 62/236 (26%)

Query: 77  QNSTHNNPW-------VWLNAYSRIPL-VAMQGFCNSTKEYCPPGLQG---------PIG 119
           Q  TH  P        + +   S  P    M+G    T    P G QG         P+G
Sbjct: 355 QRGTHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVG 414

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGV------------------VGPPGPQGIPGDEGKRG 161
            +G  GA G  G  G +G  G+PG                    GPPG +G PGD G  G
Sbjct: 415 SQGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPG 474

Query: 162 PKGDMG---YPGPQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            KG+ G    PGP GI      PG+EGKRGP+GD                  PG  G PG
Sbjct: 475 FKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGD------------------PGTVGPPG 516

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G PG  G PG DG+PG  G  GE+G  G  G +G  G  G PG P +   +
Sbjct: 517 PMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGAR 572



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 86/164 (52%), Gaps = 9/164 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 279 GFAGSPGARGFPGAPGLPGLKGHRGHKG---LEGPKGEVGAPGSKGEAGPTGPMGAMGPM 335

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G  G  G PG  G  GIPG +G  G PG  G  G  
Sbjct: 336 GPRGMPGERGRLGPQ---GAPGQRGTHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPT 392

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           G  G  G  G++G TGP G  G  G+ G  GT      K  + S
Sbjct: 393 GARGPEGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGPTGS 436



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 88/201 (43%), Gaps = 30/201 (14%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  G+ G  GP GP G  G  G R
Sbjct: 279 GFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPMGPR 338

Query: 161 GPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G+ G  GPQG PG        GK GP G +G PG  G  G  G+ GE G  G  G  
Sbjct: 339 GMPGERGRLGPQGAPGQRGTHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPE 398

Query: 215 GMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGN---------------------R 250
           G  G  G+ G P   G  G+PG  GT+G  G  GP G+                      
Sbjct: 399 GPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGST 458

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  GI G PG P +  +K E+
Sbjct: 459 GPPGIRGQPGDPGVPGFKGEA 479



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/169 (42%), Positives = 77/169 (45%), Gaps = 21/169 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G  GE G  G  G  G+RG  G PG  GP GP GIPG  G  G  G  G  GP 
Sbjct: 333 GPMGPRGMPGERGRLGPQGAPGQRGTHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPT 392

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG----------- 221
           G  G EG +G +G+ G PG +G     GLPG  G DG PG  G  G PG           
Sbjct: 393 GARGPEGPQGQRGETGPPGPVG---SQGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPP 449

Query: 222 -------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                    G PG  G PG  G  G KG  GP+G  G  GI G  G P 
Sbjct: 450 GSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPG 498



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 79/145 (54%), Gaps = 6/145 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 326

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GPMGAMGPMGPRGMPGERGRLGPQGAPGQRGTHGMPGKPGPMGPLGIPGSSGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G +G  GP+G RG++G  G
Sbjct: 387 GEAGPTGARGPEGPQGQRGETGPPG 411



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP         E
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGP---------E 584

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK GP G  G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    
Sbjct: 585 GKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR--- 641

Query: 218 GIPGKDG 224
           G PGKDG
Sbjct: 642 GAPGKDG 648



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 79/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------------KGD 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP                   G 
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGAPGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPVGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+ G  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRTGKRGLLGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------------ 217
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPPGAPGPA 929

Query: 218 ---GIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 71/150 (47%), Gaps = 2/150 (1%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G  G  G  G+PG  G+PG +G RG KG  G  G +G  G  G  G  G 
Sbjct: 269 PGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGP 328

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G  G  G  G+PG+ G  G  G PG  GT+G  G  GP G  G  G +G PG P +   
Sbjct: 329 MGAMGPMGPRGMPGERGRLGPQGAPGQRGTHGMPGKPGPMGPLGIPGSSGFPGNPGMKGE 388

Query: 268 KRESCSLLPNSETSQL--LIPPTIVGSEHI 295
              + +  P     Q     PP  VGS+ +
Sbjct: 389 AGPTGARGPEGPQGQRGETGPPGPVGSQGL 418



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 81/200 (40%), Gaps = 48/200 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGVGPTGPPGEPGEPGPMGPIGARGPEGPPGKPGEDGEPGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 272 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 332 MGPMGPRGMPGERGRLGPQGAPGQRGTHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGINGVPGTPA 263
           TG RG  G  G  G  G P 
Sbjct: 392 TGARGPEGPQGQRGETGPPG 411



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIGLD---------------GRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPPGAPGPAGPLGEPGKEGPPGLRG 945

Query: 210 IPGRNG 215
            PG +G
Sbjct: 946 DPGSHG 951



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 49/90 (54%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRTGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+ G +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLLGPQGPRGDKGDHGDRGDRGQKGHRGF 1147


>gi|395519953|ref|XP_003764104.1| PREDICTED: collagen alpha-2(V) chain, partial [Sarcophilus
           harrisii]
          Length = 1501

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 475 VPGFKGEAGPKGEPGPHGIQGPIGPIGE---------EGKRGPRGDPGTVGPPGPVGERG 525

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMGYPGRI---GLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+ G     GPKG  G PGR    GL G  GL G PG+ G
Sbjct: 526 SPGNRGFPGSDGLPGPKGAQGERGPAGSSGPKGGQGDPGRTGEPGLPGARGLTGNPGVQG 585

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 586 PEGKLGPLGAPGEDGRPGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 642



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 87/176 (49%), Gaps = 27/176 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  G+ G  GE G  G  G++GAPG  G  GP G  G  G  G +G+ G PGP 
Sbjct: 618 GLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPSGLAGERGEQGPPGPT 677

Query: 172 --------------------QGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                               QG+PGD G     GP+G+ G PG  G  G  GLPGE G+ 
Sbjct: 678 GFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMA 737

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           G  G +G  G PG  G PG  G PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 738 GGHGPDGPKGSPGPSGTPGDAGPPGLQGMPGERGIAGTPGPKGDRGGLGEKGAEGT 793



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 84/145 (57%), Gaps = 9/145 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +GE G  G  G KG +G+ G  G  G PG +G+ G+ G +GP+G +G   P 
Sbjct: 537 GLPGPKGAQGERGPAGSSGPKGGQGDPGRTGEPGLPGARGLTGNPGVQGPEGKLG---PL 593

Query: 173 GIPGDEGKRGPKGDMG---YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG++G+ GP G +G    PG +GL G  G  G+PG    PG  G  G+PG+ G PGKD
Sbjct: 594 GAPGEDGRPGPAGSIGIRGQPGSMGLPGPKGSSGDPGK---PGEAGNAGVPGQRGAPGKD 650

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G +G  G  G+ G RG +G  G
Sbjct: 651 GEVGPSGPVGPSGLAGERGEQGPPG 675



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 90/189 (47%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 581 PGVQGPEGKLGPLGAPGEDGRPGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 640

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---------------------------DGL 201
           PG +G PG +G+ GP G +G  G  G  G                             G+
Sbjct: 641 PGQRGAPGKDGEVGPSGPVGPSGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 700

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG+PG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+G+ G SG  G  G 
Sbjct: 701 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDAGP 760

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 761 PGLQGMPGE 769



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 80/152 (52%), Gaps = 9/152 (5%)

Query: 115 QGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           QG  GQ   +G+ G  G  G KGE G KG PG  G  GP G  G+EGKRGP+GD G  GP
Sbjct: 458 QGSTGQPGIRGQTGDPGVPGFKGEAGPKGEPGPHGIQGPIGPIGEEGKRGPRGDPGTVGP 517

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
              PG  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+ G P   G+
Sbjct: 518 ---PGPVGERGSPGNRGFPGSDGLPGPKGAQGERGPAGSSGPKGGQGDPGRTGEP---GL 571

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG  G  G  G+ GP G  G  G  G  G P 
Sbjct: 572 PGARGLTGNPGVQGPEGKLGPLGAPGEDGRPG 603



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 88/195 (45%), Gaps = 45/195 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------- 155
           PG  G  G+ G  GA+G  G +G+RGE G PG VG    QG+PG                
Sbjct: 383 PGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGS---QGLPGTVGTDGTPGAKGPTGS 439

Query: 156 -----------------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                                    G RG  GD G PG +G  G +G+ GP G  G  G 
Sbjct: 440 PGTSGPPGSTGPPGSPGPQGSTGQPGIRGQTGDPGVPGFKGEAGPKGEPGPHGIQGPIGP 499

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGN 249
           IG +G+ G  G+PG  G PG  G  G PG  G PG DG+PG  G  GE+   G +GP+G 
Sbjct: 500 IGEEGKRGPRGDPGTVGPPGPVGERGSPGNRGFPGSDGLPGPKGAQGERGPAGSSGPKGG 559

Query: 250 RGKSGINGVPGTPAI 264
           +G  G  G PG P  
Sbjct: 560 QGDPGRTGEPGLPGA 574



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/137 (43%), Positives = 71/137 (51%), Gaps = 12/137 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G    KGE G  GA G +GP GP+G+PG+ G+ GP      
Sbjct: 299 PGLKGHRGHKGLEGPKGEIGATGAKGEAGPTGAMGAMGPMGPRGMPGERGRLGP------ 352

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
              QG PG  G  G  G  G  G +G+ G  G PG PG+ G  G  G  G  G  G  G+
Sbjct: 353 ---QGSPGQRGAHGMPGKPGPMGPLGITGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGE 409

Query: 229 DGIPGTNGTNGEKGMTG 245
            G PG  G+ G  G  G
Sbjct: 410 TGPPGPVGSQGLPGTVG 426



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 89/190 (46%), Gaps = 27/190 (14%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 750 GPSGTPGDAGPPGLQGMPGERGIAGTPGPKGDRGGLGEKGAEGTAGNDGARGLPGPLGPP 809

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---------------PGRI 193
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+               PG  
Sbjct: 810 GPAGPTGEKGEPGPRGLVGTPGSRGTPGSRGENGPTGAVGFAGPPGPDGQPGVKGEPGEP 869

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G  G PG  GL G PG +G +G+PG  G  G  G PG  G  G  G  GP G  G +
Sbjct: 870 GQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAT 929

Query: 254 GINGVPGTPA 263
           G  G  G P 
Sbjct: 930 GPAGPLGEPG 939



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 79/158 (50%), Gaps = 24/158 (15%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDE---------GKRGPKGDMGY 168
             G +G +G+ G+RGE+G PG+ GP       GP G PGD+         G  GP G+ G 
Sbjct: 992  TGQRGIVGMPGQRGERGMPGLPGPAGTPGKAGPTGAPGDKGPSGPVGPPGVNGPVGEAGP 1051

Query: 169  PGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK--- 222
             GP    G PG +G  G +GD G PG  GL G  G PG PG  G  G  G  G PG    
Sbjct: 1052 EGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGATGDAGPRGDPGSRGP 1111

Query: 223  ---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                G  GK G+ G  G  G+KG  G RG+RG+ G  G
Sbjct: 1112 VGPPGRTGKRGLSGPQGPRGDKGDHGDRGDRGQKGHRG 1149



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 79/155 (50%), Gaps = 12/155 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY------PGPQ 172
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G        GP 
Sbjct: 270 GEPGRNGNPGEVGFSGSPGARGFPGAPGFPGLKGHRGHKGLEGPKGEIGATGAKGEAGPT 329

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G  G  GP+G  G  GR+G  G  G  G  G+ G PG  G  GI G  G PG  G+ 
Sbjct: 330 GAMGAMGPMGPRGMPGERGRLGPQGSPGQRGAHGMPGKPGPMGPLGITGSAGFPGNPGMK 389

Query: 233 GTNGTNGEKGMTGPRGNRGKS------GINGVPGT 261
           G  G  G +G  GP+G RG++      G  G+PGT
Sbjct: 390 GEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGT 424



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 83/185 (44%), Gaps = 39/185 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGDEGKR 160
           G  GP+G +G  G +G +G +G  G++GA G+ G PGP G             PG +G+ 
Sbjct: 333 GAMGPMGPRGMPGERGRLGPQGSPGQRGAHGMPGKPGPMGPLGITGSAGFPGNPGMKGEA 392

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------------------ 202
           GP G  G  GPQG  G+ G  GP G  G PG +G DG  G                    
Sbjct: 393 GPTGARGPEGPQGQRGETGPPGPVGSQGLPGTVGTDGTPGAKGPTGSPGTSGPPGSTGPP 452

Query: 203 ------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                 G  G  GI G+ G  G+PG  G  G  G PG +G    +G  GP G  GK G  
Sbjct: 453 GSPGPQGSTGQPGIRGQTGDPGVPGFKGEAGPKGEPGPHGI---QGPIGPIGEEGKRGPR 509

Query: 257 GVPGT 261
           G PGT
Sbjct: 510 GDPGT 514



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 69/150 (46%), Gaps = 2/150 (1%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G  G  G  G+PG  G PG +G RG KG  G  G IG  G  G  G  G 
Sbjct: 272 PGRNGNPGEVGFSGSPGARGFPGAPGFPGLKGHRGHKGLEGPKGEIGATGAKGEAGPTGA 331

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G  G  G  G+PG+ G  G  G PG  G +G  G  GP G  G +G  G PG P +   
Sbjct: 332 MGAMGPMGPRGMPGERGRLGPQGSPGQRGAHGMPGKPGPMGPLGITGSAGFPGNPGMKGE 391

Query: 268 KRESCSLLPNSETSQL--LIPPTIVGSEHI 295
              + +  P     Q     PP  VGS+ +
Sbjct: 392 AGPTGARGPEGPQGQRGETGPPGPVGSQGL 421



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 85/197 (43%), Gaps = 51/197 (25%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGP 162
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP      PGP G PGD    GP
Sbjct: 704 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDA---GP 760

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL--------------------- 201
            G  G PG +GI G  G +G +G +G  G  G  G DG                      
Sbjct: 761 PGLQGMPGERGIAGTPGPKGDRGGLGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGE 820

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGK---------------DGIPGTNGTNGEKGMTGP 246
           PG  GL G PG  G  G  G++G  G                 G PG  G  G+ G  GP
Sbjct: 821 PGPRGLVGTPGSRGTPGSRGENGPTGAVGFAGPPGPDGQPGVKGEPGEPGQKGDAGSPGP 880

Query: 247 R---GNRGKSGINGVPG 260
           +   G+ G  G NGVPG
Sbjct: 881 QGLAGSPGPHGPNGVPG 897



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 56/121 (46%), Gaps = 15/121 (12%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM------------GYPGRIGLDGRD 199
            G+PG  G+R   G  G PGP G PG  G  G  GD             G  G  G +G  
Sbjct: 999  GMPGQRGER---GMPGLPGPAGTPGKAGPTGAPGDKGPSGPVGPPGVNGPVGEAGPEGPA 1055

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
            G  G PG DG  G  G  G PG  GLPG  G PGT G  G  G  GPRG+ G  G  G P
Sbjct: 1056 GNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGATGDAGPRGDPGSRGPVGPP 1115

Query: 260  G 260
            G
Sbjct: 1116 G 1116



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 74/167 (44%), Gaps = 33/167 (19%)

Query: 127  KGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
            KGE G  G++G+ G+PG   + G PGP G  G  G +G +G  G PG  G PG  G+ GP
Sbjct: 863  KGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGP 922

Query: 184  KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKD----- 223
             G  G  G  G  G  G  G PGL G PG +G                 G  G+D     
Sbjct: 923  PGPTGATGPAGPLGEPGKEGPPGLRGDPGSHGRIGDRGPTGPPGSPGDKGDSGEDGQPGP 982

Query: 224  ----------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      G  G  G+PG  G  G  G+ GP G  GK+G  G PG
Sbjct: 983  DGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKAGPTGAPG 1029



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 83/218 (38%), Gaps = 69/218 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------VGPPGPQGIPGDEGKRGP 162
            PG QG  G  G  G  G  G+KG RG +G PG          VGPPGP G  G  G  G 
Sbjct: 878  PGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGATGPAGPLGE 937

Query: 163  KGDMGYPGPQGIPGDEGK------------------------------------RGPKGD 186
             G  G PG +G PG  G+                                     G +G 
Sbjct: 938  PGKEGPPGLRGDPGSHGRIGDRGPTGPPGSPGDKGDSGEDGQPGPDGPPGPAGTTGQRGI 997

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---------------------GKDGL 225
            +G PG+    G  G+PG PG  G PG+ G  G P                     G +G 
Sbjct: 998  VGMPGQ---RGERGMPGLPGPAGTPGKAGPTGAPGDKGPSGPVGPPGVNGPVGEAGPEGP 1054

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G DG PG +G  GE+G  G  G  G  G  G PGTP 
Sbjct: 1055 AGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPG 1092



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 80/202 (39%), Gaps = 63/202 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            PG +G  G +GE G  G +G            VKGE GE G  G  G PGPQG+ G  G 
Sbjct: 830  PGSRGTPGSRGENGPTGAVGFAGPPGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGP 889

Query: 160  RGP---------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             GP         +G  G PG  G PG  G+ GP G  G  G  G  G  G  G PGL G 
Sbjct: 890  HGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGATGPAGPLGEPGKEGPPGLRGD 949

Query: 211  PG------------------------------------------RNGMDGIPGKDGLPGK 228
            PG                                          + G+ G+PG+ G  G 
Sbjct: 950  PGSHGRIGDRGPTGPPGSPGDKGDSGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGM 1009

Query: 229  DGIPGTNGTNGEKGMTGPRGNR 250
             G+PG  GT G+ G TG  G++
Sbjct: 1010 PGLPGPAGTPGKAGPTGAPGDK 1031



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 45/88 (51%), Gaps = 12/88 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDM 166
            G  GP G  G  G  G  G  GERG++G PG  G PG QG PG  G        GP+GD 
Sbjct: 1047 GEAGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGATGDAGPRGDP 1106

Query: 167  GYPGPQGIPGDEGKR------GPKGDMG 188
            G  GP G PG  GKR      GP+GD G
Sbjct: 1107 GSRGPVGPPGRTGKRGLSGPQGPRGDKG 1134



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 80/200 (40%), Gaps = 48/200 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEM----------------------------------------- 130
           PG  GP+G +G  G +G+                                          
Sbjct: 215 PGSVGPVGPRGPQGLQGKQGGVGPAGPPGEPGEPGPMGPVGARGPEGPPGKPGEDGEPGR 274

Query: 131 -GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G PG +G RG KG  G  G  G  G +G+ GP G MG 
Sbjct: 275 NGNPGEVGFSGSPGARGFPGAPGFPGLKGHRGHKGLEGPKGEIGATGAKGEAGPTGAMGA 334

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+ G  G PG  G  GE G 
Sbjct: 335 MGPMGPRGMPGERGRLGPQGSPGQRGAHGMPGKPGPMGPLGITGSAGFPGNPGMKGEAGP 394

Query: 244 TGPRGNRGKSGINGVPGTPA 263
           TG RG  G  G  G  G P 
Sbjct: 395 TGARGPEGPQGQRGETGPPG 414


>gi|157427707|ref|NP_001098759.1| collagen alpha-2(V) chain precursor [Sus scrofa]
 gi|62086218|dbj|BAD91584.1| procollagen alpha 2(V) [Sus scrofa]
          Length = 1499

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 89/207 (42%), Gaps = 54/207 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQG---------PIGQKGEIGAKGEMGVKGERGEKGAPGV---- 144
            M+G    T    P G QG         P+G +G  GA G  G  G +G  G+PG     
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGPTGSPGTSGPP 443

Query: 145 --------------VGPPGPQGIPGDEGKRGPKGDMG---YPGPQGI------PGDEGKR 181
                          GPPG +G PGD G  G KG+ G    PGP GI      PG+EGKR
Sbjct: 444 GLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKR 503

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP+GD                  PG  G PG  G  G PG  G PG DG+PG  G  GE+
Sbjct: 504 GPRGD------------------PGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGER 545

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G +G  G  G PG P +   +
Sbjct: 546 GPVGSSGPKGGQGDPGRPGEPGLPGAR 572



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 89/179 (49%), Gaps = 30/179 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---K 222
            G  G+PG  G  GP    G  G+PG  G+ G  G  G  G +G  G+ G  G PG    
Sbjct: 356 RGAHGMPGKPGPMGPLGIPGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGS 415

Query: 223 DGLPGK---DGIPGTNGTNGEKGM------------------TGPRGNRGKSGINGVPG 260
            GLPG    DG PG  G  G  G                   TGP G RG+ G  GVPG
Sbjct: 416 QGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPG 474



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 88/201 (43%), Gaps = 30/201 (14%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  G+ G  GP GP G  G  G R
Sbjct: 279 GFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPMGPR 338

Query: 161 GPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G+ G  GPQG PG        GK GP G +G PG  G  G  G+ GE G  G  G  
Sbjct: 339 GMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSPGFPGNPGMKGEAGPTGARGPE 398

Query: 215 GMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGN---------------------R 250
           G  G  G+ G P   G  G+PG  GT+G  G  GP G+                      
Sbjct: 399 GPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGST 458

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  GI G PG P +  +K E+
Sbjct: 459 GPPGIRGQPGDPGVPGFKGEA 479



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 75/151 (49%), Gaps = 12/151 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G        G +
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVG------ATGSK 320

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDGIP 232
           G+ GP G MG  G +G  G  G  G  G  G PG+ G  G+PGK G      +PG  G P
Sbjct: 321 GEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSPGFP 380

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  GE G TG RG  G  G  G  G P 
Sbjct: 381 GNPGMKGEAGPTGARGPEGPQGQRGETGPPG 411



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 85/198 (42%), Gaps = 33/198 (16%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---- 152
           V   G         P G  GP+G +G  G +G +G +G  G++GA G+ G PGP G    
Sbjct: 314 VGATGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGI 373

Query: 153 -----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                 PG+ G +G  G  G  GP+G  G  G+ GP G +G  G  G  G DG PG  G 
Sbjct: 374 PGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGP 433

Query: 208 DGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR----- 247
            G PG                 G  G PG  G PG  G+PG  G  G KG  GP      
Sbjct: 434 TGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGP 493

Query: 248 ----GNRGKSGINGVPGT 261
               G  GK G  G PGT
Sbjct: 494 IGPPGEEGKRGPRGDPGT 511



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP         E
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGP---------E 584

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK GP G  G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    
Sbjct: 585 GKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR--- 641

Query: 218 GIPGKDG 224
           G PGKDG
Sbjct: 642 GAPGKDG 648



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 79/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------------KGD 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP                   G 
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGAPGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSRGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+ G  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLLGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------------ 217
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPA 929

Query: 218 ---GIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 49/90 (54%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G RG  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSRGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+ G +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLLGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 89/233 (38%), Gaps = 84/233 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP    G+PG +G R   GP G  
Sbjct: 849  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 908

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 909  GFPGSAGRVGPPGPTGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 968

Query: 194  ---------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
                                 G  G  G+PG+ G  G+PG  G  G PGK G        
Sbjct: 969  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGAPGDK 1028

Query: 226  -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                             PG +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 1029 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1081



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 79/197 (40%), Gaps = 63/197 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGLD---------------GRDGLPGEPGLDG 209
            P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886  PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPLGEPGKEGPPGLRG 945

Query: 210  IPG------------------------------------------RNGMDGIPGKDGLPG 227
             PG                                          + G+ G+PG+ G  G
Sbjct: 946  DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1005

Query: 228  KDGIPGTNGTNGEKGMT 244
              G+PG  GT G+ G T
Sbjct: 1006 MPGLPGPAGTPGKVGPT 1022



 Score = 39.3 bits (90), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 208 DGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           DG PGRN      G  G PG  G PG  G+PG  G  G KG+ GP+G  G +G  G
Sbjct: 266 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKG 321


>gi|348528769|ref|XP_003451888.1| PREDICTED: collagen alpha-1(II) chain-like isoform 2 [Oreochromis
           niloticus]
          Length = 1421

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/143 (47%), Positives = 82/143 (57%), Gaps = 12/143 (8%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKRGPKGDMGYPGPQ 172
           GP+G KG  G  G  G KGE G KG    +GPP   GP G  G+EGKRGP+G+ G  GP+
Sbjct: 381 GPLGPKGTSGDPGIPGFKGEAGPKG---EIGPPGLQGPNGPQGEEGKRGPRGEPGSAGPR 437

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG+   RG  G+ G+PG+ GL G  G PGE G  G  G  G  G PG+   PG+ G+P
Sbjct: 438 GPPGE---RGAPGNRGFPGQDGLAGPKGAPGERGPSGASGPKGASGDPGR---PGEPGLP 491

Query: 233 GTNGTNGEKGMTGPRGNRGKSGI 255
           G  G  G  G  GP+G  G SG 
Sbjct: 492 GARGLTGRPGDAGPQGKVGPSGA 514



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 92/193 (47%), Gaps = 36/193 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
           PG  G  G+ G  GA+G  G +G RGE G PG  GP G  G PG +G  G KG  G PG 
Sbjct: 302 PGSPGAKGEAGPTGARGPEGAQGPRGESGTPGSPGPSGASGNPGTDGIPGAKGSAGAPGI 361

Query: 171 -----------------------PQG------IPGDEGKRGPKGDMGYP------GRIGL 195
                                  P+G      IPG +G+ GPKG++G P      G  G 
Sbjct: 362 AGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIPGFKGEAGPKGEIGPPGLQGPNGPQGE 421

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +G+ G  GEPG  G  G  G  G PG  G PG+DG+ G  G  GE+G +G  G +G SG 
Sbjct: 422 EGKRGPRGEPGSAGPRGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGASGPKGASGD 481

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 482 PGRPGEPGLPGAR 494



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 88/177 (49%), Gaps = 15/177 (8%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  PPGLQGP G +GE G +G  G  G  G +G PG  G PG +G PG
Sbjct: 394 IPGFKGEAGPKGEIGPPGLQGPNGPQGEEGKRGPRGEPGSAGPRGPPGERGAPGNRGFPG 453

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            +G  GPKG  G  GP G     G +G  GD G PG  GL G  GL G PG  G  G+ G
Sbjct: 454 QDGLAGPKGAPGERGPSGA---SGPKGASGDPGRPGEPGLPGARGLTGRPGDAGPQGKVG 510

Query: 216 MDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+D            G PG  G PG  G  GE G +G +G  G  G+ G+PG
Sbjct: 511 PSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGLAGAPGLRGLPG 567



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 86/186 (46%), Gaps = 33/186 (17%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGIPG 155
           E  P G  GP G++G   E GA G  G++G RG  G PG  GP          G QG PG
Sbjct: 622 EAGPAGATGPRGERGFPGERGAAGSQGLQGPRGLPGTPGTDGPKGAIGPAGTAGAQGPPG 681

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL------------------DG 197
            +G  G +G  G PGP+G  GD G++GP+G  G  G  GL                   G
Sbjct: 682 LQGMPGERGGAGIPGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPSGPNGEKGESG 741

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG+ G PG  G  G PG  G    PG DG PGT G  GE G  G  G  G  G
Sbjct: 742 PAGPSGAPGVRGAPGDRGETGPPGPAGFAGPPGADGQPGTKGEQGEPGQKGDAGAPGPQG 801

Query: 255 INGVPG 260
            +G PG
Sbjct: 802 PSGAPG 807



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 81/184 (44%), Gaps = 33/184 (17%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G   +     PPGLQG  G++G  G  G  G +G+ GEKG         P+G PG +G R
Sbjct: 669 GPAGTAGAQGPPGLQGMPGERGGAGIPGPKGDRGDVGEKG---------PEGAPGKDGAR 719

Query: 161 G---------------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G                KG+ G  GP G PG  G  G +G+ G PG  G        G P
Sbjct: 720 GLTGPIGPPGPSGPNGEKGESGPAGPSGAPGVRGAPGDRGETGPPGPAGFA------GPP 773

Query: 206 GLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           G DG PG  G  G PG+    G PG  G  G  G  G  G++GP+G RG  G  G  G P
Sbjct: 774 GADGQPGTKGEQGEPGQKGDAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFP 833

Query: 263 AICA 266
               
Sbjct: 834 GAAG 837



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 85/184 (46%), Gaps = 39/184 (21%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------KGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+ G             +G+ 
Sbjct: 531 GQPGVMGFPGPKGATGEPGKSGEKGLAGAPGLRGLPGKDGETGSAGPPGPAGPAGERGEQ 590

Query: 167 GYPGP---------------------QGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLP 202
           G PGP                     QG+PG+    G  GP+G+ G+PG  G  G  GL 
Sbjct: 591 GQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGPAGATGPRGERGFPGERGAAGSQGLQ 650

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVP 259
           G  GL G PG +G  G  G  G  G  G PG  G  GE+   G+ GP+G+RG  G  G  
Sbjct: 651 GPRGLPGTPGTDGPKGAIGPAGTAGAQGPPGLQGMPGERGGAGIPGPKGDRGDVGEKGPE 710

Query: 260 GTPA 263
           G P 
Sbjct: 711 GAPG 714



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 113/311 (36%), Gaps = 100/311 (32%)

Query: 44  KGDIFDNSVP-----QTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIP--- 95
           KG   D  +P       P  E  PP L      + +E +      P    +A  R P   
Sbjct: 386 KGTSGDPGIPGFKGEAGPKGEIGPPGLQGPNGPQGEEGKRGPRGEPG---SAGPRGPPGE 442

Query: 96  --LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
                 +GF          GL GP G  GE G  G  G KG  G+ G PG  G PG +G+
Sbjct: 443 RGAPGNRGFPGQD------GLAGPKGAPGERGPSGASGPKGASGDPGRPGEPGLPGARGL 496

Query: 154 ---PGD---EGKRGPKGD---------------------MGYPGPQGIPGDEGKRGPKGD 186
              PGD   +GK GP G                      MG+PGP+G  G+ GK G KG 
Sbjct: 497 TGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGATGEPGKSGEKGL 556

Query: 187 MGYPGRIGLDGRD----------------------------------------------- 199
            G PG  GL G+D                                               
Sbjct: 557 AGAPGLRGLPGKDGETGSAGPPGPAGPAGERGEQGQPGPSGFQGLPGPPGPPGEGGKPGD 616

Query: 200 -GLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G+PGE G  G  G  G  G PG+       GL G  G+PGT GT+G KG  GP G  G 
Sbjct: 617 QGVPGEAGPAGATGPRGERGFPGERGAAGSQGLQGPRGLPGTPGTDGPKGAIGPAGTAGA 676

Query: 253 SGINGVPGTPA 263
            G  G+ G P 
Sbjct: 677 QGPPGLQGMPG 687



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 70/145 (48%), Gaps = 30/145 (20%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GE G  G  GP G +G PG+   RG  G  G  GP+G+PG  G  GPKG +G  G  G  
Sbjct: 621 GEAGPAGATGPRGERGFPGE---RGAAGSQGLQGPRGLPGTPGTDGPKGAIGPAGTAGAQ 677

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGK------------DGLPGKDGIPG---------TN 235
           G       PGL G+PG  G  GIPG             +G PGKDG  G          +
Sbjct: 678 G------PPGLQGMPGERGGAGIPGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPS 731

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G NGEKG +GP G  G  G+ G PG
Sbjct: 732 GPNGEKGESGPAGPSGAPGVRGAPG 756



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 77/175 (44%), Gaps = 21/175 (12%)

Query: 83  NPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG-------- 134
            P     A     L  M G         P G +G +G+KG  GA G+ G +G        
Sbjct: 669 GPAGTAGAQGPPGLQGMPGERGGAGIPGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPP 728

Query: 135 -------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
                  E+GE G  G  G PG +G PGD G+ GP G  G+ GP   PG +G+ G KG+ 
Sbjct: 729 GPSGPNGEKGESGPAGPSGAPGVRGAPGDRGETGPPGPAGFAGP---PGADGQPGTKGEQ 785

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           G PG+    G  G PG  G  G PG  G  G+ G  G  G  G PG  G  G  G
Sbjct: 786 GEPGQ---KGDAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAG 837



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 84/227 (37%), Gaps = 81/227 (35%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+R           
Sbjct: 218 PGIKGHRGYPGRDGAKGETGAVGAKGESGSPGESGAPGPMGPRGLPGERGRPGASGAAGA 277

Query: 161 -------------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                    G  G  G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 278 RGNDGLPGPAGPPGPVGPSGAPGFPGSPGAKGEAGPTGARGPEGAQGPRGESGTPGSPGP 337

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIP------------------------GKDGLPGKDGI 231
            G     G PG DGIPG  G  G P                        G  G  G  GI
Sbjct: 338 SGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGI 394

Query: 232 P------------------GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           P                  G NG  GE+G  GPRG  G +G  G PG
Sbjct: 395 PGFKGEAGPKGEIGPPGLQGPNGPQGEEGKRGPRGEPGSAGPRGPPG 441



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 86/195 (44%), Gaps = 48/195 (24%)

Query: 98  AMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ 151
            ++G      E  PPG     GP G  G+ G KGE G  G++G+ GAPG  GP   PGP 
Sbjct: 750 GVRGAPGDRGETGPPGPAGFAGPPGADGQPGTKGEQGEPGQKGDAGAPGPQGPSGAPGPA 809

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGDM 187
           G  G  G +G +G  G PG  G PG  G+                        +G +GD 
Sbjct: 810 GPTGVSGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPPGPAGPPGKDGPKGVRGDG 869

Query: 188 GYPGR---IGLDGRDGLPGEPG---------------LDGIPGRNGMDGIPGKDGLPGKD 229
           G PGR    GL G  G  GE G                 G+ G+ G+ G+PG+ G  G  
Sbjct: 870 GPPGRQGDAGLRGPAGASGEKGDAGEDGPPGPPGPSGPQGLAGQRGIVGLPGQRGERGFP 929

Query: 230 GIPGTNGTNGEKGMT 244
           G+PG +G  G++G +
Sbjct: 930 GLPGPSGEPGKQGAS 944



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPG 176
           +KGE G  G  G  G RG  G  G  GPPGP G    PG +G+ G KG+ G PG +   G
Sbjct: 736 EKGESGPAGPSGAPGVRGAPGDRGETGPPGPAGFAGPPGADGQPGTKGEQGEPGQK---G 792

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           D G  GP+G  G PG  G  G  G  G  G  G PG  G  G  G+
Sbjct: 793 DAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGR 838



 Score = 46.6 bits (109), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 80/212 (37%), Gaps = 69/212 (32%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP--------- 150
           QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 785 QGEPGQKGDAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPPGP 844

Query: 151 ------------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------ 180
                             +G+ GD G  G +GD G  GP G  G++G             
Sbjct: 845 NGNPGPPGPAGPPGKDGPKGVRGDGGPPGRQGDAGLRGPAGASGEKGDAGEDGPPGPPGP 904

Query: 181 ------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------------- 217
                  G +G +G PG+    G  G PG PG  G PG+ G                   
Sbjct: 905 SGPQGLAGQRGIVGLPGQR---GERGFPGLPGPSGEPGKQGASGGPGDRGPPGPVGPPGL 961

Query: 218 ----GIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
               G PG++G PG DG PG +G+ G KG  G
Sbjct: 962 TGPAGEPGREGTPGSDGPPGRDGSPGNKGERG 993



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 79/196 (40%), Gaps = 48/196 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G  GP G +G  G  G  G+KG RG       KG  G VG  G  G PG+ G  GP G  
Sbjct: 201 GPSGPQGARGFPGTPGLPGIKGHRGYPGRDGAKGETGAVGAKGESGSPGESGAPGPMGPR 260

Query: 167 GYPGPQ------------------------------------GIPGDEGKRGPKGDMGYP 190
           G PG +                                    G PG +G+ GP G  G  
Sbjct: 261 GLPGERGRPGASGAAGARGNDGLPGPAGPPGPVGPSGAPGFPGSPGAKGEAGPTGARGPE 320

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP------GTNGTNGEKGMT 244
           G  G  G  G PG PG  G  G  G DGIPG  G  G  GI       G  G  G +G T
Sbjct: 321 GAQGPRGESGTPGSPGPSGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGAT 380

Query: 245 GPRGNRGKSGINGVPG 260
           GP G +G SG  G+PG
Sbjct: 381 GPLGPKGTSGDPGIPG 396


>gi|149730792|ref|XP_001501867.1| PREDICTED: collagen alpha-2(V) chain [Equus caballus]
          Length = 1499

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 89/207 (42%), Gaps = 54/207 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQG---------PIGQKGEIGAKGEMGVKGERGEKGAPGV---- 144
            M+G    T    P G QG         P+G +G  GA G  G  G +G  G+PG     
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGPTGSPGTSGPP 443

Query: 145 --------------VGPPGPQGIPGDEGKRGPKGDMG---YPGPQGI------PGDEGKR 181
                          GPPG +G PGD G  G KG+ G    PGP GI      PG+EGKR
Sbjct: 444 GLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKR 503

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP+GD                  PG  G PG  G  G PG  G PG DG+PG  G  GE+
Sbjct: 504 GPRGD------------------PGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGER 545

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G +G  G  G PG P +   +
Sbjct: 546 GPVGSSGPKGGQGDPGRPGEPGLPGAR 572



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 89/179 (49%), Gaps = 30/179 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---K 222
            G  G+PG  G  GP    G  G+PG  G+ G  G  G  G +G  G+ G  G PG    
Sbjct: 356 RGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGS 415

Query: 223 DGLPGK---DGIPGTNGTNGEKGM------------------TGPRGNRGKSGINGVPG 260
            GLPG    DG PG  G  G  G                   TGP G RG+ G  GVPG
Sbjct: 416 QGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPG 474



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPTGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 76/145 (52%), Gaps = 12/145 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G +G  GA G  G+KG RG KG  G  G  G  G  G+ G  GP G MG  GP+
Sbjct: 279 GFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPMGPR 338

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG+ G+ GP+G    PG+ G  G         + G PG  G  GIPG  G PG  G+ 
Sbjct: 339 GMPGERGRLGPQG---APGQRGAHG---------MPGKPGPMGPLGIPGSSGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G +G  GP+G RG++G  G
Sbjct: 387 GEAGPTGARGPEGPQGQRGETGPPG 411



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------------KGD 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP                   G 
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGAPGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 75/151 (49%), Gaps = 12/151 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G        G +
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVG------ATGSK 320

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDGIP 232
           G+ GP G MG  G +G  G  G  G  G  G PG+ G  G+PGK G      +PG  G P
Sbjct: 321 GEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFP 380

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  GE G TG RG  G  G  G  G P 
Sbjct: 381 GNPGMKGEAGPTGARGPEGPQGQRGETGPPG 411



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 86/198 (43%), Gaps = 33/198 (16%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGP--- 147
           V   G         P G  GP+G +G  G +G +G +G  G++GA      PG +GP   
Sbjct: 314 VGATGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGI 373

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G +G  G  G  GP+G  G  G+ GP G +G  G  G  G DG PG  G 
Sbjct: 374 PGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGP 433

Query: 208 DGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR----- 247
            G PG                 G  G PG  G PG  G+PG  G  G KG  GP      
Sbjct: 434 TGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGP 493

Query: 248 ----GNRGKSGINGVPGT 261
               G  GK G  G PGT
Sbjct: 494 IGPPGEEGKRGPRGDPGT 511



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP         E
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGP---------E 584

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK GP G  G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    
Sbjct: 585 GKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR--- 641

Query: 218 GIPGKDG 224
           G PGKDG
Sbjct: 642 GAPGKDG 648



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG     G  GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 70/150 (46%), Gaps = 2/150 (1%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G  G  G  G+PG  G+PG +G RG KG  G  G +G  G  G  G  G 
Sbjct: 269 PGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGP 328

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G  G  G  G+PG+ G  G  G PG  G +G  G  GP G  G  G +G PG P +   
Sbjct: 329 MGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGE 388

Query: 268 KRESCSLLPNSETSQL--LIPPTIVGSEHI 295
              + +  P     Q     PP  VGS+ +
Sbjct: 389 AGPTGARGPEGPQGQRGETGPPGPVGSQGL 418



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 21/117 (17%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------G 173
           +KGE G +               G+VGPPG +G PG  G+ GP G +G+ GPQ      G
Sbjct: 814 EKGEPGPR---------------GLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPG 858

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           + G+ G+ G KGD G PG  GL G  G  G  G+ G+ G  G  G PG  G PG  G
Sbjct: 859 VKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAG 915



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 89/233 (38%), Gaps = 84/233 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP    G+PG +G R   GP G  
Sbjct: 849  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 908

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 909  GFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 968

Query: 194  ---------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
                                 G  G  G+PG+ G  G+PG  G  G PGK G        
Sbjct: 969  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGAPGDK 1028

Query: 226  -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                             PG +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 1029 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1081



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 80/197 (40%), Gaps = 63/197 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 886  PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 946  DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1005

Query: 228  KDGIPGTNGTNGEKGMT 244
              G+PG  GT G+ G T
Sbjct: 1006 MPGLPGPAGTPGKVGPT 1022


>gi|363736838|ref|XP_422303.3| PREDICTED: collagen alpha-1(XI) chain isoform 3 [Gallus gallus]
          Length = 1807

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 79/148 (53%), Gaps = 15/148 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G         D G +G +G++G PGP+G  G E
Sbjct: 764 GVKGADGVRGLKGSKGEKGEDGFPGFKG---------DMGLKGDRGEVGQPGPRGEDGPE 814

Query: 179 G---KRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G   + GP GD G  G  G  G+    GLPG PG  G  G  G  G PG +G  G  G+ 
Sbjct: 815 GPKGRAGPSGDPGAAGPAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLH 874

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G++G TGPRG+RG  G  G PG
Sbjct: 875 GKPGPRGQRGPTGPRGSRGPRGPTGKPG 902



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 6/100 (6%)

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           + G PGPQG  G +G  GP G  G  GR G DG  G+PGEPG  G  G +G+ G+PG  G
Sbjct: 555 ESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKG 614

Query: 225 LPG------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G        G+PG +G+ GE G  GPRG  G++G  G+
Sbjct: 615 NRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGL 654



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 60/125 (48%), Gaps = 24/125 (19%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----- 176
            G  G +GE G KGE G +GAPG  GP GPQG     GK GP+G  G PGP G  G     
Sbjct: 1370 GAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGP---AGKPGPEGLRGIPGPVGEQGLPGAP 1426

Query: 177  ----------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                             +G  G KG+ G+PG IGL G  G  GE G  G+PG  G  G  
Sbjct: 1427 GQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGAK 1486

Query: 221  GKDGL 225
            G  G+
Sbjct: 1487 GDAGI 1491



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 101/287 (35%), Gaps = 108/287 (37%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEG 158
           E   PG QGP G +G  G  G+ G +G  G  GA G+ G PG +G         +PGD+G
Sbjct: 555 ESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKG 614

Query: 159 KRG---------------PKGDMGYPGPQGIPGDEGKR---------------------- 181
            RG                +G+ G  GP+G+PG+ G R                      
Sbjct: 615 NRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGLLGPRGTPGPPGQPGIAGIDG 674

Query: 182 --GPKGDM------------------------------------GYPGRIGLDGRDGLPG 203
             GPKG+M                                    G PG  GL G DG PG
Sbjct: 675 PSGPKGNMGPQGEPGPPGQQGIPGPQGLPGPQGPIGPPGEKGPQGKPGLPGLPGSDGPPG 734

Query: 204 EPGLD------------------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            PG +                        G+ G +G+ G+ G  G  G+DG PG  G  G
Sbjct: 735 HPGKEGQSGEKGALGPPGPQGPVGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMG 794

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
            KG  G  G  G  G +G  G         +  +  P  E  +L +P
Sbjct: 795 LKGDRGEVGQPGPRGEDGPEGPKGRAGPSGDPGAAGPAGEKGKLGVP 841



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 64/134 (47%), Gaps = 36/134 (26%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------- 152
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G                 
Sbjct: 773 GLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQPGPRGEDGPEGPKGRAGPSGDPGAAGPA 832

Query: 153 ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIGLD 196
                     +PG  G++GPKG  G+PG  G  G++G RG      P+G  G  G  G  
Sbjct: 833 GEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLHGKPGPRGQRGPTGPRGSR 892

Query: 197 GRDGLPGEPGLDGI 210
           G  G  G+PG  G 
Sbjct: 893 GPRGPTGKPGPKGT 906



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 58/125 (46%), Gaps = 24/125 (19%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---- 210
            G EG++G KG  G PG +G PG  G  GP+G  G PG  GL G  G  GE GL G     
Sbjct: 1370 GAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAPGQD 1429

Query: 211  -----------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                             PG  G  G PG  GL    G PG  G  G++G+ GP+G+ G  
Sbjct: 1430 GPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGL---IGPPGEQGEKGDRGLPGPQGSPGAK 1486

Query: 254  GINGV 258
            G  G+
Sbjct: 1487 GDAGI 1491



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 61/145 (42%), Gaps = 45/145 (31%)

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------- 179
            G  G  G PGPQGIPG   K GP G  G+PG +G+PG +G                    
Sbjct: 1004 GKEGAKGDPGPQGIPG---KDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPVGSP 1060

Query: 180  -KRGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
             +RG  G                     + G PG  G  G  G  G  G  G+PG  G  
Sbjct: 1061 GERGAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPS 1120

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG+DG  G+ G PG  G+ G+KG
Sbjct: 1121 GSPGEDGDKGEIGEPGQKGSKGDKG 1145



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 66/152 (43%), Gaps = 36/152 (23%)

Query: 148 PGPQGI------PGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPK----------- 184
           PGPQG+       G  G++GP+G  G P      GP G PG EG+ G K           
Sbjct: 697 PGPQGLPGPQGPIGPPGEKGPQGKPGLPGLPGSDGPPGHPGKEGQSGEKGALGPPGPQGP 756

Query: 185 -------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                        G  G  G  G  G DG PG  G  G+ G  G  G PG  G  G +G 
Sbjct: 757 VGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQPGPRGEDGPEGP 816

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G +G+ G  GP G +GK G+ G+PG P 
Sbjct: 817 KGRAGPSGDPGAAGPAGEKGKLGVPGLPGYPG 848



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
           PGL G  G++G  G+ G  G  G  GEKGA G+ G PGP+G     G  G RGP+G  G 
Sbjct: 841 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLHGKPGPRGQRGPTGPRGSRGPRGPTGK 900

Query: 169 PGPQGI 174
           PGP+G 
Sbjct: 901 PGPKGT 906



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 56/150 (37%), Gaps = 57/150 (38%)

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG-------------------- 197
            GK G KGD   PGPQGIP   GK GP G  G+PG  GL G                    
Sbjct: 1004 GKEGAKGD---PGPQGIP---GKDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPV 1057

Query: 198  -------------------------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                                             G PGE G  G  GR+G+ G  G  G  
Sbjct: 1058 GSPGERGAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPA 1117

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G PG +G  GE G  G +G++G  G N
Sbjct: 1118 GPSGSPGEDGDKGEIGEPGQKGSKGDKGEN 1147



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 85/194 (43%), Gaps = 36/194 (18%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------- 147
              ++GF     E   PG QGP G KG  G +G  G  G  GE+GA G  GP         
Sbjct: 1024 AGLRGFPG---ERGLPGAQGPAGLKGGEGPQGPPGPVGSPGERGAAGTAGPIGLPGRPGP 1080

Query: 148  ------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                   G +G PG++G +GP G  G  GP G+P      GP G  G PG  G  G  G 
Sbjct: 1081 QGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP------GPAGPSGSPGEDGDKGEIGE 1134

Query: 202  PGEPGLDGIPGRNGMD------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PG+ G  G  G NG              GI G DG PG  G  G  G  G++G  G  G 
Sbjct: 1135 PGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGPRGFPGP 1194

Query: 250  RGKSGINGVPGTPA 263
             G  G+ G+PG P 
Sbjct: 1195 PGPIGLQGLPGPPG 1208



 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 77/184 (41%), Gaps = 51/184 (27%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------------ 163
            G+ GAKG+ G +G  G+ G  G+ G PG +G+PG +G  G K                  
Sbjct: 1004 GKEGAKGDPGPQGIPGKDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPVGSPGER 1063

Query: 164  GDMGYPGP------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  G  GP                  +G PG++G +GP G  G  G +GL G  G  G P
Sbjct: 1064 GAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPSGSP 1123

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKD------------GIPGTNGTNGEKGMTGPRGNRGKS 253
            G DG  G  G  G  G  G  G++            G PG  G +GE    GPRG +G  
Sbjct: 1124 GEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGE---PGPRGQQGMF 1180

Query: 254  GING 257
            G  G
Sbjct: 1181 GQKG 1184


>gi|334326375|ref|XP_001368061.2| PREDICTED: collagen alpha-3(V) chain [Monodelphis domestica]
          Length = 1762

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/151 (45%), Positives = 86/151 (56%), Gaps = 9/151 (5%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG+ G+KG+RG+ G      P GP+G  G EG +G  G +G  
Sbjct: 735 GLKGEKGEKGEDGFPGFKGDAGLKGDRGDPG------PLGPRGEDGPEGLKGQAGLLGEE 788

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G  G++GK G  G  GYPGR G  G +G PG  GL G  G+ G  G PG++G  G  
Sbjct: 789 GPPGPAGEKGKLGIPGLPGYPGRQGPKGSNGFPGPLGLAGEKGKRGKAGQPGQEGERGPP 848

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G NG  G  GP+G+ G  G  GVPG
Sbjct: 849 GSRGERGQNGPTGKPGPKGDVGHDGAPGVPG 879



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 82/157 (52%), Gaps = 6/157 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G  G  G  G+ GVKG  G +G  G  G  G  G PG +G  G KGD G PGP 
Sbjct: 708 GAQGPEGATGPTGYPGQGGVKGTSGNRGLKGEKGEKGEDGFPGFKGDAGLKGDRGDPGPL 767

Query: 173 GIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  G++G  G KG  G       PG  G  G+ G+PG PG  G  G  G +G PG  GL 
Sbjct: 768 GPRGEDGPEGLKGQAGLLGEEGPPGPAGEKGKLGIPGLPGYPGRQGPKGSNGFPGPLGLA 827

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G+ G  G  G  G++G  GP G+RG+ G NG  G P 
Sbjct: 828 GEKGKRGKAGQPGQEGERGPPGSRGERGQNGPTGKPG 864



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 78/140 (55%), Gaps = 12/140 (8%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYPG 170
           ++GP G  G  G  G +G+ G  G KG  G+ GP GP   QG+PG  GK G +G  G  G
Sbjct: 490 MKGPPGPVGLTGRAGPLGLPGYPGLKGDTGIAGPQGPRGLQGLPGPPGKEGKQGRSGADG 549

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           P+G+PGD    GPKGD G+      DG  GLPGE G  G  G  G  G PG+DG  G +G
Sbjct: 550 PRGLPGD---TGPKGDRGF------DGLPGLPGEKGQRGDVGHVGQPGPPGEDGKKGSEG 600

Query: 231 IPGTNGTNGEKGMTGPRGNR 250
            PG +G  GE G  G  G+R
Sbjct: 601 PPGPSGQAGEPGPRGLLGSR 620



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 86/176 (48%), Gaps = 30/176 (17%)

Query: 112 PGLQGPIGQKGE---------------------IGAKGEMGVKGERGEKGAPGVVGPPGP 150
           PGLQGPIG  G+                      G +G  G KG +G +GA G  G PG 
Sbjct: 665 PGLQGPIGAPGDKGPPGKPGIPGLPGAEGPPGHPGHEGPTGEKGAQGPEGATGPTGYPGQ 724

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG---------LDGRDGL 201
            G+ G  G RG KG+ G  G  G PG +G  G KGD G PG +G         L G+ GL
Sbjct: 725 GGVKGTSGNRGLKGEKGEKGEDGFPGFKGDAGLKGDRGDPGPLGPRGEDGPEGLKGQAGL 784

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GE G  G  G  G  GIPG  G PG+ G  G+NG  G  G+ G +G RGK+G  G
Sbjct: 785 LGEEGPPGPAGEKGKLGIPGLPGYPGRQGPKGSNGFPGPLGLAGEKGKRGKAGQPG 840



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 92/178 (51%), Gaps = 33/178 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           GL+G  G  G +G +GE G +G +G+ G  G  GPPGP G         +PG  G++GPK
Sbjct: 756 GLKGDRGDPGPLGPRGEDGPEGLKGQAGLLGEEGPPGPAGEKGKLGIPGLPGYPGRQGPK 815

Query: 164 GDMGYPGPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G+PGP G+ G++GKRG       +G+ G PG  G  G++G  G+PG  G  G +G  
Sbjct: 816 GSNGFPGPLGLAGEKGKRGKAGQPGQEGERGPPGSRGERGQNGPTGKPGPKGDVGHDGAP 875

Query: 218 GIPGKDG------------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G+PG+ G                    GK+G PG  G  GE G  G  G+ G +G+ G
Sbjct: 876 GVPGEKGPQGLTGPPGFPGPKGPPGPAGKEGRPGHPGQRGELGFQGQTGSPGPAGVIG 933



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 69/125 (55%), Gaps = 21/125 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+G  G  G KG+ G+ G +G +G  G+ GPPG            P+G+PGD    
Sbjct: 501 GRAGPLGLPGYPGLKGDTGIAGPQGPRGLQGLPGPPGKEGKQGRSGADGPRGLPGD---T 557

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GPKGD G+ G  G+PG++G+RG  G +G PG  G DG+       G +G PG +G  G P
Sbjct: 558 GPKGDRGFDGLPGLPGEKGQRGDVGHVGQPGPPGEDGKK------GSEGPPGPSGQAGEP 611

Query: 221 GKDGL 225
           G  GL
Sbjct: 612 GPRGL 616



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 60/119 (50%), Gaps = 6/119 (5%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           +G PG  G  GP G+ G  GP+G       PG  G +G  G+ G  G  G  G DG PG 
Sbjct: 692 EGPPGHPGHEGPTGEKGAQGPEGATGPTGYPGQGGVKGTSGNRGLKGEKGEKGEDGFPGF 751

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G+ G  G  G  G  G  G +G+ G  G  GE+G  GP G +GK GI G+PG P 
Sbjct: 752 KGDAGLKGDRGDPGPLGPRGEDGPEGLKGQAGLLGEEGPPGPAGEKGKLGIPGLPGYPG 810



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 80/172 (46%), Gaps = 21/172 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G      E  PPG  G  G+ G  G  G  G +G +G  G       PGP G+ G++
Sbjct: 777 GLKGQAGLLGEEGPPGPAGEKGKLGIPGLPGYPGRQGPKGSNGF------PGPLGLAGEK 830

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG-------- 209
           GKRG  G  G  G +G PG  G+RG  G  G PG  G  G DG PG PG  G        
Sbjct: 831 GKRGKAGQPGQEGERGPPGSRGERGQNGPTGKPGPKGDVGHDGAPGVPGEKGPQGLTGPP 890

Query: 210 -------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                   PG  G +G PG  G  G+ G  G  G+ G  G+ GP+G  G++G
Sbjct: 891 GFPGPKGPPGPAGKEGRPGHPGQRGELGFQGQTGSPGPAGVIGPQGKAGETG 942



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 88/219 (40%), Gaps = 51/219 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G +G  G  G  G KG+RG+ G  G  GPPG  G  G EG  GP G  G PGP
Sbjct: 554 PGDTGPKGDRGFDGLPGLPGEKGQRGDVGHVGQPGPPGEDGKKGSEGPPGPSGQAGEPGP 613

Query: 172 QGIPGD---------------EGKRGPKGDMGY------------PGRIGLDG------- 197
           +G+ G                +G  G KG++G             PG  GL G       
Sbjct: 614 RGLLGSRGPPGPPGQPGVVGVDGPPGAKGNVGIPGEPGPPGQQGNPGSQGLPGLQGPIGA 673

Query: 198 -----------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
                             +G PG PG +G  G  G  G  G  G  G  G  G  GT+G 
Sbjct: 674 PGDKGPPGKPGIPGLPGAEGPPGHPGHEGPTGEKGAQGPEGATGPTGYPGQGGVKGTSGN 733

Query: 241 KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
           +G+ G +G +G+ G  G  G   +   + +   L P  E
Sbjct: 734 RGLKGEKGEKGEDGFPGFKGDAGLKGDRGDPGPLGPRGE 772



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 100/238 (42%), Gaps = 66/238 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD--------- 156
           PGL G  GQ+G++G  G+ G  GE G+KG+ G  GP      PGP+G+ G          
Sbjct: 569 PGLPGEKGQRGDVGHVGQPGPPGEDGKKGSEGPPGPSGQAGEPGPRGLLGSRGPPGPPGQ 628

Query: 157 ------EGKRGPKGDMGY------------PGPQGIPGDEGKRGPKGDM----------- 187
                 +G  G KG++G             PG QG+PG +G  G  GD            
Sbjct: 629 PGVVGVDGPPGAKGNVGIPGEPGPPGQQGNPGSQGLPGLQGPIGAPGDKGPPGKPGIPGL 688

Query: 188 -------GYPGRIGLDGRDGLPGE---------PGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                  G+PG  G  G  G  G          PG  G+ G +G  G+ G+ G  G+DG 
Sbjct: 689 PGAEGPPGHPGHEGPTGEKGAQGPEGATGPTGYPGQGGVKGTSGNRGLKGEKGEKGEDGF 748

Query: 232 P---GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           P   G  G  G++G  GP G RG+ G  G+ G   +     E     P  E  +L IP
Sbjct: 749 PGFKGDAGLKGDRGDPGPLGPRGEDGPEGLKGQAGLLG---EEGPPGPAGEKGKLGIP 803



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/138 (43%), Positives = 76/138 (55%), Gaps = 9/138 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP+G  GE G +G+ G  G+ GE+G PG  G    +G  G  GK GPKGD+G+ G  
Sbjct: 819 GFPGPLGLAGEKGKRGKAGQPGQEGERGPPGSRGE---RGQNGPTGKPGPKGDVGHDGAP 875

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG+   +GP+G  G PG  G  G  G  G+ G  G PG+ G  G  G+ G PG  G+ 
Sbjct: 876 GVPGE---KGPQGLTGPPGFPGPKGPPGPAGKEGRPGHPGQRGELGFQGQTGSPGPAGVI 932

Query: 233 GTNGTNGEKGMTGPRGNR 250
           G  G  GE   TGP G R
Sbjct: 933 GPQGKAGE---TGPLGER 947



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 97/270 (35%), Gaps = 86/270 (31%)

Query: 64  DLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGE 123
           +L E  ++R++E  N T N          R P   +  F ++ ++          GQKGE
Sbjct: 347 ELPESSKDRDEEWGNDTMN---TIFGPAERGPESQIYIFPDAGEK----------GQKGE 393

Query: 124 I----------------------------------------GAKGEMGVKGERGEKGAPG 143
                                                    G  G  GV G  G +G PG
Sbjct: 394 PAVVEVGQQFEGPPGLPGPLGTVGPSGPPGPPGFPGDPGEKGPAGRPGVPGVDGVRGLPG 453

Query: 144 VV-------------GPP--------------------GPQGIPGDEGKRGPKGDMGYPG 170
            V             GPP                    GP G  G  G+ GP G  GYPG
Sbjct: 454 TVIMMPFQYGGEFLKGPPSSFQQAQAQAVLQQAQLSMKGPPGPVGLTGRAGPLGLPGYPG 513

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            +G  G  G +GP+G  G PG  G +G+ G  G  G  G+PG  G  G  G DGLPG  G
Sbjct: 514 LKGDTGIAGPQGPRGLQGLPGPPGKEGKQGRSGADGPRGLPGDTGPKGDRGFDGLPGLPG 573

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G  GP G  GK G  G PG
Sbjct: 574 EKGQRGDVGHVGQPGPPGEDGKKGSEGPPG 603



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 87/205 (42%), Gaps = 57/205 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERG---------------------EKGAPGVVGPPGPQ 151
            GL+G  G  G IGA G  G +G  G                     E GA G  GPPGP 
Sbjct: 1005 GLKGSQGPPGPIGANGPPGERGPVGPAGGIGLPGQGGGQGPLGPAGEIGASGERGPPGPT 1064

Query: 152  GIPG---------------DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYP 190
            G  G                 G+ G KG+MG PG +G  GD+      G  G +G +G+P
Sbjct: 1065 GKDGIPGLPGPLGPAGAAGPAGEDGDKGEMGAPGHKGSKGDKGEPGPPGPTGIQGPVGHP 1124

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGM------------DGIPGKDGLPGKDGIPGTNGTN 238
            G  G DG  G  G PGL G  G +G+             G+PG    PG+ G  G  G+ 
Sbjct: 1125 GSPGADGERGRRGPPGLFGQKGDDGVRGFPGGIGPPGLQGMPGP---PGEKGEIGDVGSM 1181

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  GPRG +G SG  G PG P 
Sbjct: 1182 GPHGAPGPRGPQGPSGSEGTPGLPG 1206



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 62/147 (42%), Gaps = 42/147 (28%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGI---------------PGDEGKRGPKGDMGY 168
            +G  G  G  GERG +G PG+ G  G  G+               PG  G++G  GD+G 
Sbjct: 1121 VGHPGSPGADGERGRRGPPGLFGQKGDDGVRGFPGGIGPPGLQGMPGPPGEKGEIGDVGS 1180

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             GP G PG  G +GP G  G PG                  +PG  G  G  G+ G PG+
Sbjct: 1181 MGPHGAPGPRGPQGPSGSEGTPG------------------LPGGVGQPGAVGEKGEPGE 1222

Query: 229  ---------DGIPGTNGTNGEKGMTGP 246
                      G  G+ G  GEKG +GP
Sbjct: 1223 VGDPGPPGKPGPMGSKGEFGEKGDSGP 1249



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 70/160 (43%), Gaps = 39/160 (24%)

Query: 128  GEMGVKGERGEKGAP---------GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG-- 176
            G  G +GE+G KG P         G+VGP GP       G+ G +G  G PGP G PG  
Sbjct: 1332 GHEGREGEKGAKGQPGPDGPPGRSGLVGPRGP------PGRLGAEGLPGIPGPSGEPGLL 1385

Query: 177  -------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
                                +G  G KG+ G+ G IGL G  G  GE G  G+P   G+ 
Sbjct: 1386 GPPGQMGPPGPLGPSGLPGLKGDPGFKGEKGHIGLIGLIGPPGEAGEKGDQGVP---GIQ 1442

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG  G PG  G  G  G  G  G+ GP G +G  G  G
Sbjct: 1443 GSPGPKGEPGLRGPKGPLGHPGSPGLAGPLGQKGSKGSPG 1482



 Score = 39.7 bits (91), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 75/193 (38%), Gaps = 66/193 (34%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGE---------------------RGEKGA---------- 141
            G+QG  G  G++GA G  G  GE                      GEKGA          
Sbjct: 1293 GVQGEKGDHGDVGAPGPSGASGEPGPPGPPGKRGPGGRMGHEGREGEKGAKGQPGPDGPP 1352

Query: 142  --PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------------DE 178
               G+VGP GP       G+ G +G  G PGP G PG                      +
Sbjct: 1353 GRSGLVGPRGP------PGRLGAEGLPGIPGPSGEPGLLGPPGQMGPPGPLGPSGLPGLK 1406

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  G KG+ G+ G IGL G  G  GE      PG+ G PG  G  G+ G  G  G  G P
Sbjct: 1407 GDPGFKGEKGHIGLIGLIGPPGEAGEKGDQGVPGIQGSPGPKGEPGLRGPKGPLGHPGSP 1466

Query: 233  GTNGTNGEKGMTG 245
            G  G  G+KG  G
Sbjct: 1467 GLAGPLGQKGSKG 1479


>gi|119569210|gb|EAW48825.1| collagen, type IX, alpha 1, isoform CRA_d [Homo sapiens]
          Length = 678

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/195 (43%), Positives = 107/195 (54%), Gaps = 36/195 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKG---------ERGEKG 140
           L  M+G   +  E   PG QG  G++G      E+GA+G  G +G         ++GEKG
Sbjct: 182 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 241

Query: 141 APGVVGPPGPQGI---PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+   PGD+G+R      GPKGD G  G +GIP   G  GPKGD G P 
Sbjct: 242 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIP---GLPGPKGDTGLP- 297

Query: 192 RIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G+DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  G
Sbjct: 298 --GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 246 PRGNRGKSGINGVPG 260
             GN GK G  G PG
Sbjct: 356 QMGNSGKPGQQGPPG 370



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA G+ G P            GPKGD G
Sbjct: 248 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP------------GPKGDTG 295

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 296 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GP+   G+RG+ G  G PG P 
Sbjct: 356 QMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 397



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 234

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 235 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 289



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 71/134 (52%), Gaps = 6/134 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  GD G  
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEK 240

Query: 191 GRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ G+    
Sbjct: 241 GARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLP--- 297

Query: 248 GNRGKSGINGVPGT 261
           G  G+ GI G+PGT
Sbjct: 298 GVDGRDGIPGMPGT 311



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GPQ
Sbjct: 325 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 378

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PG+
Sbjct: 379 GLPGSRGELGPVGSPGLPGK 398


>gi|73486664|ref|NP_511040.2| collagen alpha-1(IX) chain isoform 2 precursor [Homo sapiens]
 gi|39645587|gb|AAH63646.1| Collagen, type IX, alpha 1 [Homo sapiens]
 gi|119569209|gb|EAW48824.1| collagen, type IX, alpha 1, isoform CRA_c [Homo sapiens]
          Length = 678

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/195 (43%), Positives = 107/195 (54%), Gaps = 36/195 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKG---------ERGEKG 140
           L  M+G   +  E   PG QG  G++G      E+GA+G  G +G         ++GEKG
Sbjct: 182 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 241

Query: 141 APGVVGPPGPQGI---PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+   PGD+G+R      GPKGD G  G +GIPG     GPKGD G P 
Sbjct: 242 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP---GPKGDTGLP- 297

Query: 192 RIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G+DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  G
Sbjct: 298 --GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 246 PRGNRGKSGINGVPG 260
             GN GK G  G PG
Sbjct: 356 QMGNSGKPGQQGPPG 370



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA G+ G P            GPKGD G
Sbjct: 248 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP------------GPKGDTG 295

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 296 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GP+   G+RG+ G  G PG P 
Sbjct: 356 QMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 397



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 234

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 235 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 289



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 71/134 (52%), Gaps = 6/134 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  GD G  
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEK 240

Query: 191 GRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ G+    
Sbjct: 241 GARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLP--- 297

Query: 248 GNRGKSGINGVPGT 261
           G  G+ GI G+PGT
Sbjct: 298 GVDGRDGIPGMPGT 311



 Score = 43.1 bits (100), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GPQ
Sbjct: 325 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 378

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PG+
Sbjct: 379 GLPGSRGELGPVGSPGLPGK 398


>gi|297678470|ref|XP_002817093.1| PREDICTED: collagen alpha-1(IX) chain isoform 2 [Pongo abelii]
          Length = 678

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/195 (43%), Positives = 107/195 (54%), Gaps = 36/195 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKG---------ERGEKG 140
           L  M+G   +  E   PG QG  G++G      E+GA+G  G +G         ++GEKG
Sbjct: 182 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 241

Query: 141 APGVVGPPGPQGI---PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+   PGD+G+R      GPKGD G  G +GIP   G  GPKGD G P 
Sbjct: 242 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIP---GLPGPKGDTGLP- 297

Query: 192 RIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G+DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  G
Sbjct: 298 --GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 246 PRGNRGKSGINGVPG 260
             GN GK G  G PG
Sbjct: 356 QMGNSGKPGQQGPPG 370



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA G+ G P            GPKGD G
Sbjct: 248 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP------------GPKGDTG 295

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 296 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GP+   G+RG+ G  G PG P 
Sbjct: 356 QMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 397



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 234

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 235 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 289



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 71/134 (52%), Gaps = 6/134 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  GD G  
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEK 240

Query: 191 GRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ G+    
Sbjct: 241 GARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLP--- 297

Query: 248 GNRGKSGINGVPGT 261
           G  G+ GI G+PGT
Sbjct: 298 GVDGRDGIPGMPGT 311



 Score = 42.7 bits (99), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GPQ
Sbjct: 325 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 378

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PG+
Sbjct: 379 GLPGSRGELGPVGSPGLPGK 398


>gi|200216|gb|AAA68102.1| pro-alpha-1 type II collagen [Mus musculus]
          Length = 1442

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/181 (42%), Positives = 90/181 (49%), Gaps = 30/181 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           P G  GP G  G+ GAKG+ G  G++G+ GAPG  GP   PGPQG  G  G +G +G  G
Sbjct: 787 PAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQG 846

Query: 168 YPGPQGIPGDEG---------------------KRGPKG---DMGYPGRI---GLDGRDG 200
            PG  G PG  G                     K GPKG   D G PGR    GL+G  G
Sbjct: 847 PPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLEGPAG 906

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGE G  G  G +G+DG PG  GL G+ GI G  G  GE+G  G  G  G+ G  G PG
Sbjct: 907 APGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 966

Query: 261 T 261
            
Sbjct: 967 A 967



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 88/189 (46%), Gaps = 39/189 (20%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 643 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPG 702

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G R               G KG+ G
Sbjct: 703 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEAG 762

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG  G  G  G PGEPG  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G
Sbjct: 763 PPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 822

Query: 249 NRGKSGING 257
             G  G  G
Sbjct: 823 PSGAPGPQG 831



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 86/196 (43%), Gaps = 48/196 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  GA+G  G  GE G  G  G  GPPG  G PG   D+G+ G KGD G P
Sbjct: 759 GEAGPPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAP 818

Query: 170 GPQG---IPGDEG------------KRGPKGDMGYPGRIGL------------------- 195
           GPQG    PG +G             +GP G  G+PG  G                    
Sbjct: 819 GPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPA 878

Query: 196 -----------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                       G  G  G+PGL+G  G  G  G PG DG  G DG PG  G  G++G+ 
Sbjct: 879 GKDGPKGVRGDSGPPGRAGDPGLEGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIV 938

Query: 245 GPRGNRGKSGINGVPG 260
           G  G RG+ G  G+PG
Sbjct: 939 GLPGQRGERGFPGLPG 954



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 88/190 (46%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPK--------- 163
           GP+G KG+ G  G  G KG++G KG     GP GPQG P   G+EGKRG +         
Sbjct: 402 GPLGPKGQAGEPGIAGFKGDQGPKG---ETGPAGPQGAPGPAGEEGKRGARGEPGGAGPI 458

Query: 164 ---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMD 217
              G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ 
Sbjct: 459 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLT 518

Query: 218 GIPG---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG                             G PG  G PG  G NGE G  G +G  
Sbjct: 519 GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLA 578

Query: 251 GKSGINGVPG 260
           G  G+ G+PG
Sbjct: 579 GAPGLRGLPG 588



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 87/209 (41%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGK------------- 159
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG +G              
Sbjct: 330 GEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 389

Query: 160 --------------------------------RGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                           +GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 390 GPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGEEGKRGAR 449

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 450 GEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 506

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 507 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 535



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 88/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 806  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGA 865

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G+ GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 866  NGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLEGPAGAPGEKGEPGDDGPSGLDGP 925

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 926  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 985

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 986  AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1016



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 97/240 (40%), Gaps = 75/240 (31%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 703 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEAG 762

Query: 141 APGV---------------VGPPGPQGIP------------GDEGKRGPKGDMGYPGPQG 173
            PG                 GPPGP G              GD+G+ G KGD G PGPQG
Sbjct: 763 PPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 822

Query: 174 IPGDEGKRGP---------KGDMGYPGRIGLDG------------------------RDG 200
             G  G +GP         +G  G PG  G  G                        +DG
Sbjct: 823 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDG 882

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ GI G+PG
Sbjct: 883 PKGVRGDSGPPGRAGDPGLEGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPG 942



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 88/209 (42%), Gaps = 60/209 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 477 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 536

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM- 216
                         +G PG  G  GPKG  G PG+ G     GL G PGL G+PG++G  
Sbjct: 537 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAG---EKGLAGAPGLRGLPGKDGET 593

Query: 217 -----------------DGIPGK---------------------DGLPGKDGIPGTNGTN 238
                             G PG                       G+PG+ G PG  G  
Sbjct: 594 GAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPR 653

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAI 264
           GE+G  G RG+ G  G+    G+PGTP  
Sbjct: 654 GERGFPGERGSPGAQGLQGPRGLPGTPGT 682



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 75/169 (44%), Gaps = 36/169 (21%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 705 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 758

Query: 164 GDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G+ G PGP      +G PG+ G+ GP G  G+ G  G DG+ G  G+          G  
Sbjct: 759 GEAGPPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGD---------QGEA 809

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G  G  G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 810 GQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 858



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 89/223 (39%), Gaps = 72/223 (32%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------------VGPPGP- 150
           G  GP G  GE G  GE G+ G  G +G PG                       G PGP 
Sbjct: 558 GFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQGAPGPS 617

Query: 151 --------------------QGIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDM 187
                               QGIPG+ G  G   P+G+ G+PG +G PG +G +GP+G  
Sbjct: 618 GFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLP 677

Query: 188 GYPGRIGLDGR---------------DGLPGEPGLDGIPGRNGMDG---IPGKDGLPGKD 229
           G PG  G  G                 G+PGE G  GI G  G  G     G +G PGKD
Sbjct: 678 GTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKD 737

Query: 230 GIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G           G NGEKG  GP G  G +G  G PG P 
Sbjct: 738 GGRGLTGPIGPPGPAGANGEKGEAGPPGPSGSTGARGAPGEPG 780



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 80/189 (42%), Gaps = 54/189 (28%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKG 164
            PPG  G  G +G  GA GE   KGE G+ G  G+ GPPGPQG+ G  G      +RG +G
Sbjct: 892  PPGRAGDPGLEGPAGAPGE---KGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERG 948

Query: 165  DMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDG 209
              G PGP G PG +G  G  GD                G PGR G          PG DG
Sbjct: 949  FPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADG 999

Query: 210  IPGRNGMDGIPGKDG---------------------LPGKDGIPGTNGTNGEKGMTGPRG 248
             PGR+G  G+ G  G                       GK G  G  G  G  G +GP G
Sbjct: 1000 PPGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAG 1059

Query: 249  NRGKSGING 257
             RG +G  G
Sbjct: 1060 ARGIAGPQG 1068



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 75/189 (39%), Gaps = 57/189 (30%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G       +G PG+ G  GP G  G PG  GIPG +G       
Sbjct: 329 KGEAGPTGARGPEGAQGS------RGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 382

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GE    G  G PG  G 
Sbjct: 383 AGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGE 442

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 443 EGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 502

Query: 256 NGVPGTPAI 264
            G PG P +
Sbjct: 503 PGRPGEPGL 511



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 79/223 (35%), Gaps = 81/223 (36%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG---------EKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GP+G +G  G  G  GVKG RG         E GAPGV G     G PG+ G  GP 
Sbjct: 222 GLPGPMGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGE---SGSPGENGSPGPM 278

Query: 164 GDMGYPG------------------------------------------PQGIPGDEGKR 181
           G  G PG                                           +G  G  G R
Sbjct: 279 GPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGAR 338

Query: 182 GP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG----------------- 221
           GP   +G  G PG  G  G  G  G PG DGIPG  G  G PG                 
Sbjct: 339 GPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ 398

Query: 222 -------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                    G  G+ GI G  G  G KG TGP G +G  G  G
Sbjct: 399 GATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAG 441



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 83/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 239 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 298

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +G +G+ G PG  G 
Sbjct: 299 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGP 358

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 359 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGI 415

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 416 AGFKGDQGPKGETGPAGPQGAPG-PAGEEGKR 446



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 3/70 (4%)

Query: 173 GIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG  G+RG   P G  G+PG  GL G  G  G PGLDG  G  G  G+ G+ G PG++
Sbjct: 213 GKPGKSGERGLPGPMGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN 272

Query: 230 GIPGTNGTNG 239
           G PG  G  G
Sbjct: 273 GSPGPMGPRG 282


>gi|363736844|ref|XP_001231624.2| PREDICTED: collagen alpha-1(XI) chain isoform 1 [Gallus gallus]
          Length = 1819

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 79/148 (53%), Gaps = 15/148 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G         D G +G +G++G PGP+G  G E
Sbjct: 776 GVKGADGVRGLKGSKGEKGEDGFPGFKG---------DMGLKGDRGEVGQPGPRGEDGPE 826

Query: 179 G---KRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G   + GP GD G  G  G  G+    GLPG PG  G  G  G  G PG +G  G  G+ 
Sbjct: 827 GPKGRAGPSGDPGAAGPAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLH 886

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G++G TGPRG+RG  G  G PG
Sbjct: 887 GKPGPRGQRGPTGPRGSRGPRGPTGKPG 914



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 6/100 (6%)

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           + G PGPQG  G +G  GP G  G  GR G DG  G+PGEPG  G  G +G+ G+PG  G
Sbjct: 567 ESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKG 626

Query: 225 LPG------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G        G+PG +G+ GE G  GPRG  G++G  G+
Sbjct: 627 NRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGL 666



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 60/125 (48%), Gaps = 24/125 (19%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----- 176
            G  G +GE G KGE G +GAPG  GP GPQG     GK GP+G  G PGP G  G     
Sbjct: 1382 GAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGP---AGKPGPEGLRGIPGPVGEQGLPGAP 1438

Query: 177  ----------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                             +G  G KG+ G+PG IGL G  G  GE G  G+PG  G  G  
Sbjct: 1439 GQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGAK 1498

Query: 221  GKDGL 225
            G  G+
Sbjct: 1499 GDAGI 1503



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 101/287 (35%), Gaps = 108/287 (37%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEG 158
           E   PG QGP G +G  G  G+ G +G  G  GA G+ G PG +G         +PGD+G
Sbjct: 567 ESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKG 626

Query: 159 KRG---------------PKGDMGYPGPQGIPGDEGKR---------------------- 181
            RG                +G+ G  GP+G+PG+ G R                      
Sbjct: 627 NRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGLLGPRGTPGPPGQPGIAGIDG 686

Query: 182 --GPKGDM------------------------------------GYPGRIGLDGRDGLPG 203
             GPKG+M                                    G PG  GL G DG PG
Sbjct: 687 PSGPKGNMGPQGEPGPPGQQGIPGPQGLPGPQGPIGPPGEKGPQGKPGLPGLPGSDGPPG 746

Query: 204 EPGLD------------------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            PG +                        G+ G +G+ G+ G  G  G+DG PG  G  G
Sbjct: 747 HPGKEGQSGEKGALGPPGPQGPVGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMG 806

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
            KG  G  G  G  G +G  G         +  +  P  E  +L +P
Sbjct: 807 LKGDRGEVGQPGPRGEDGPEGPKGRAGPSGDPGAAGPAGEKGKLGVP 853



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 64/134 (47%), Gaps = 36/134 (26%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------- 152
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G                 
Sbjct: 785 GLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQPGPRGEDGPEGPKGRAGPSGDPGAAGPA 844

Query: 153 ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIGLD 196
                     +PG  G++GPKG  G+PG  G  G++G RG      P+G  G  G  G  
Sbjct: 845 GEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLHGKPGPRGQRGPTGPRGSR 904

Query: 197 GRDGLPGEPGLDGI 210
           G  G  G+PG  G 
Sbjct: 905 GPRGPTGKPGPKGT 918



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 58/125 (46%), Gaps = 24/125 (19%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---- 210
            G EG++G KG  G PG +G PG  G  GP+G  G PG  GL G  G  GE GL G     
Sbjct: 1382 GAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAPGQD 1441

Query: 211  -----------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                             PG  G  G PG  GL    G PG  G  G++G+ GP+G+ G  
Sbjct: 1442 GPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGL---IGPPGEQGEKGDRGLPGPQGSPGAK 1498

Query: 254  GINGV 258
            G  G+
Sbjct: 1499 GDAGI 1503



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 61/145 (42%), Gaps = 45/145 (31%)

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------- 179
            G  G  G PGPQGIPG   K GP G  G+PG +G+PG +G                    
Sbjct: 1016 GKEGAKGDPGPQGIPG---KDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPVGSP 1072

Query: 180  -KRGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
             +RG  G                     + G PG  G  G  G  G  G  G+PG  G  
Sbjct: 1073 GERGAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPS 1132

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG+DG  G+ G PG  G+ G+KG
Sbjct: 1133 GSPGEDGDKGEIGEPGQKGSKGDKG 1157



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 66/152 (43%), Gaps = 36/152 (23%)

Query: 148 PGPQGI------PGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPK----------- 184
           PGPQG+       G  G++GP+G  G P      GP G PG EG+ G K           
Sbjct: 709 PGPQGLPGPQGPIGPPGEKGPQGKPGLPGLPGSDGPPGHPGKEGQSGEKGALGPPGPQGP 768

Query: 185 -------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                        G  G  G  G  G DG PG  G  G+ G  G  G PG  G  G +G 
Sbjct: 769 VGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQPGPRGEDGPEGP 828

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G +G+ G  GP G +GK G+ G+PG P 
Sbjct: 829 KGRAGPSGDPGAAGPAGEKGKLGVPGLPGYPG 860



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
           PGL G  G++G  G+ G  G  G  GEKGA G+ G PGP+G     G  G RGP+G  G 
Sbjct: 853 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLHGKPGPRGQRGPTGPRGSRGPRGPTGK 912

Query: 169 PGPQGI 174
           PGP+G 
Sbjct: 913 PGPKGT 918



 Score = 43.1 bits (100), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 56/150 (37%), Gaps = 57/150 (38%)

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG-------------------- 197
            GK G KGD   PGPQGIP   GK GP G  G+PG  GL G                    
Sbjct: 1016 GKEGAKGD---PGPQGIP---GKDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPV 1069

Query: 198  -------------------------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                                             G PGE G  G  GR+G+ G  G  G  
Sbjct: 1070 GSPGERGAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPA 1129

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G PG +G  GE G  G +G++G  G N
Sbjct: 1130 GPSGSPGEDGDKGEIGEPGQKGSKGDKGEN 1159



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 85/194 (43%), Gaps = 36/194 (18%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------- 147
              ++GF     E   PG QGP G KG  G +G  G  G  GE+GA G  GP         
Sbjct: 1036 AGLRGFPG---ERGLPGAQGPAGLKGGEGPQGPPGPVGSPGERGAAGTAGPIGLPGRPGP 1092

Query: 148  ------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                   G +G PG++G +GP G  G  GP G+P      GP G  G PG  G  G  G 
Sbjct: 1093 QGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP------GPAGPSGSPGEDGDKGEIGE 1146

Query: 202  PGEPGLDGIPGRNGMD------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PG+ G  G  G NG              GI G DG PG  G  G  G  G++G  G  G 
Sbjct: 1147 PGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGPRGFPGP 1206

Query: 250  RGKSGINGVPGTPA 263
             G  G+ G+PG P 
Sbjct: 1207 PGPIGLQGLPGPPG 1220



 Score = 43.1 bits (100), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 77/184 (41%), Gaps = 51/184 (27%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------------ 163
            G+ GAKG+ G +G  G+ G  G+ G PG +G+PG +G  G K                  
Sbjct: 1016 GKEGAKGDPGPQGIPGKDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPVGSPGER 1075

Query: 164  GDMGYPGP------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  G  GP                  +G PG++G +GP G  G  G +GL G  G  G P
Sbjct: 1076 GAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPSGSP 1135

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKD------------GIPGTNGTNGEKGMTGPRGNRGKS 253
            G DG  G  G  G  G  G  G++            G PG  G +GE    GPRG +G  
Sbjct: 1136 GEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGE---PGPRGQQGMF 1192

Query: 254  GING 257
            G  G
Sbjct: 1193 GQKG 1196


>gi|340380057|ref|XP_003388540.1| PREDICTED: mucin-19-like [Amphimedon queenslandica]
          Length = 3041

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 94/162 (58%), Gaps = 4/162 (2%)

Query: 103  CNSTK-EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
             N TK +  PPG++G  GQ G  G KG  G  G  G  G PG  GPPG +G+ GD+G +G
Sbjct: 2684 SNGTKGDIGPPGMKGEKGQAGTDGDKGRTGKPGSNGIPGIPGRAGPPGNKGMKGDKGSKG 2743

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             +G  G  G  G+ G +G +G KGD+G  G  G++G DG  G+    G  G  GM G+PG
Sbjct: 2744 ERGLQGETGRTGLSGSDGPKGDKGDVGEMGTPGINGTDGSKGD---KGSKGDKGMKGLPG 2800

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             DG+ G  G+ G+ GT G  G TGPRG +G+ G+ G PG P 
Sbjct: 2801 LDGMKGDKGMKGSPGTVGGIGKTGPRGEKGEKGMLGDPGLPG 2842



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 97/176 (55%), Gaps = 15/176 (8%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GP G KG  G  G  GVKG  G +G+PG+ GPPGP+G+   +G+ GPKGD G  G +G+ 
Sbjct: 2407 GPPGMKGINGTMGIKGVKGYSGSRGSPGMRGPPGPKGM---KGETGPKGDQGMIGEKGMM 2463

Query: 176  GDEGKRGPK---GDMGYPGRIGLDGRDGLPGEPGL---------DGIPGRNGMDGIPGKD 223
            G +G +G     G  G PG  GL G  G+ GE G          DG+PGRNG  GIPG  
Sbjct: 2464 GTKGIKGSTGLPGARGLPGLKGLKGNKGIKGEKGAKGFHGINGTDGVPGRNGSIGIPGHR 2523

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
            GLPG+ G  G+ G  G+KG+ G +G RG  GI G  G+P +   +       P  E
Sbjct: 2524 GLPGQKGEKGSPGLKGDKGIVGDKGERGPIGIPGSRGSPGMKGDQGLKGERGPTGE 2579



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 126/278 (45%), Gaps = 42/278 (15%)

Query: 33   SNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNN-----PWVW 87
             N+  + +  DKGD  D            PP     I ER ++ +     +     P   
Sbjct: 2159 GNKGEKGIKGDKGDKGD----------IGPPGEKGGIGERGEKGEKGMKGDQGDVGPKGN 2208

Query: 88   LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG------------EMGVKGE 135
               +  +     QG C    E   PG +G  GQKGE G +G            E+G++G 
Sbjct: 2209 DGPHGPVGDPGPQGPC----EKGNPGPRGDKGQKGENGPEGRMGPKGLKGKKGEIGMRGP 2264

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
             G+KG PG  GP   +G PGD+G +GPKG+ G  G  G P   G++G KGDMG  G  GL
Sbjct: 2265 MGDKGPPGNDGP---RGFPGDKGNQGPKGNQGITGRTGKP---GRKGSKGDMGLKGEKGL 2318

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G  G  G+PGL   PG  G  G+ G  G  G+ G+ G NG+ G+ G+ GPRG  GK G+
Sbjct: 2319 KGLQGRFGKPGL---PGAKGEKGMKGSIGYKGEKGMKGCNGSIGDTGLPGPRGPTGKQGL 2375

Query: 256  NGVPGTPAICAYKRESCSLLPNSETSQL--LIPPTIVG 291
             G  G+      K           T Q+  + PP + G
Sbjct: 2376 PGDKGSMGRKGDKGPKGDKGAVGRTGQIGKIGPPGMKG 2413



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/157 (46%), Positives = 89/157 (56%), Gaps = 15/157 (9%)

Query: 110  CPPGLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKR 160
             PP L+G  G KGE G       KG +G+KGE G  GA G  GP   PG  G+PG  G  
Sbjct: 1262 SPPPLRGDPGDKGEKGFIGSPGQKGNVGLKGENGMPGANGHSGPLGDPGNDGLPGANGST 1321

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GP G  G  G +G  GD+G+RG  G++G PG+ G  G  G PGE G  GI   NG DGIP
Sbjct: 1322 GPPGKNGITGSKGDMGDQGERGEDGEVGLPGKSGATGMKGPPGEKGSFGI---NGTDGIP 1378

Query: 221  GKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSG 254
            G  G  G +G     G N T+GEKGM G  G++G++G
Sbjct: 1379 GHTGDKGTNGTTGDSGNNATDGEKGMKGSMGDKGRTG 1415



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 94/200 (47%), Gaps = 39/200 (19%)

Query: 108  EYCPPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGV------VGPPG--------- 149
            +  PPG +G  G KG+ G+KG   + G KGERGEKG PG+       GPPG         
Sbjct: 1812 DIGPPGEKGNNGTKGDKGSKGMEGDPGPKGERGEKGDPGIDGINGTRGPPGIDGMDGQNG 1871

Query: 150  ------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
                          G+PGD G+ GP G  G  GP+G+PG  G  GPKG  G  G  G  G
Sbjct: 1872 TKGNQGLQGRRGKPGLPGDVGRTGPPGINGTSGPRGLPGKTGPPGPKGMKGQQGPNGTTG 1931

Query: 198  RDGLPGEP---------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
              G+ GEP         G  G+PG  G  G PG+ G PG+ G PG  G  G  G  G +G
Sbjct: 1932 MKGMKGEPGPIGPSGPSGRKGLPGLQGETGNPGEKGNPGRQGKPGPQGMKGSHGFKGEKG 1991

Query: 249  NRGKSGINGVPGTPAICAYK 268
             +G  G+ G  G P     K
Sbjct: 1992 EKGNEGLRGRAGKPGPMGEK 2011



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/160 (44%), Positives = 89/160 (55%), Gaps = 6/160 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVK---GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG +G  G KG IG KGE G+K   G  G+ G PG  GP G QG+PGD+G  G KGD   
Sbjct: 2331 PGAKGEKGMKGSIGYKGEKGMKGCNGSIGDTGLPGPRGPTGKQGLPGDKGSMGRKGDK-- 2388

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             GP+G  G  G+ G  G +G PG  G++G  G+ G  G  G  G  GM G PG  G+ G+
Sbjct: 2389 -GPKGDKGAVGRTGQIGKIGPPGMKGINGTMGIKGVKGYSGSRGSPGMRGPPGPKGMKGE 2447

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G  G  GEKGM G +G +G +G+ G  G P +   K
Sbjct: 2448 TGPKGDQGMIGEKGMMGTKGIKGSTGLPGARGLPGLKGLK 2487



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/154 (48%), Positives = 90/154 (58%), Gaps = 12/154 (7%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GPIG KG+IG  GE G  G +G+KG+ G+ G PGP+G  G++G  G  G  G  GP GI 
Sbjct: 1805 GPIGDKGDIGPPGEKGNNGTKGDKGSKGMEGDPGPKGERGEKGDPGIDGINGTRGPPGID 1864

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIP 232
            G +G+ G KG+ G  GR    G+ GLPG+ G  G PG NG     G+PGK G PG  G+ 
Sbjct: 1865 GMDGQNGTKGNQGLQGRR---GKPGLPGDVGRTGPPGINGTSGPRGLPGKTGPPGPKGMK 1921

Query: 233  GT---NGTNGEKGMT---GPRGNRGKSGINGVPG 260
            G    NGT G KGM    GP G  G SG  G+PG
Sbjct: 1922 GQQGPNGTTGMKGMKGEPGPIGPSGPSGRKGLPG 1955



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 95/177 (53%), Gaps = 15/177 (8%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------QGI 153
           +G    T E  PPG +GP G   + G  G MG+KGE G +G  G++G  G       QG 
Sbjct: 270 EGMKGVTGEVSPPGNRGPTGDADDRGMNGTMGMKGENGSRGDNGMIGTLGDRGRKGFQGS 329

Query: 154 PGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDG---LPGEPGL 207
            G +GK G +G  G PGP   +GI G  G +G  GD+G  G +G  G  G     G PGL
Sbjct: 330 KGIDGKDGNRGRSGLPGPIGMKGIKGALGDKGENGDIGMKGELGSKGPQGPLGKGGSPGL 389

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGT 261
            GI G++G+DG  G  G  G++G PG NGT    GEKGM G +G+ G  G  G  GT
Sbjct: 390 KGIKGQSGVDGDKGDKGEKGREGGPGVNGTKGLTGEKGMKGEKGSIGLQGSKGDTGT 446



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/155 (46%), Positives = 87/155 (56%), Gaps = 9/155 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            GLQG  G+ G  GAKGE G+KG    +GEKG  G  G  G  G+P   G RGP G  G P
Sbjct: 2320 GLQGRFGKPGLPGAKGEKGMKGSIGYKGEKGMKGCNGSIGDTGLP---GPRGPTGKQGLP 2376

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G +G  G +G +GPKGD G  GR G  G+ G PG  G++G  G  G+ G  G  G PG  
Sbjct: 2377 GDKGSMGRKGDKGPKGDKGAVGRTGQIGKIGPPGMKGINGTMGIKGVKGYSGSRGSPGMR 2436

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G PG  G  GE   TGP+G++G  G  G+ GT  I
Sbjct: 2437 GPPGPKGMKGE---TGPKGDQGMIGEKGMMGTKGI 2468



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 113/237 (47%), Gaps = 52/237 (21%)

Query: 74  KEQQNSTHNNPWVW-LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKG---------- 122
           K +  S  +N  +  L    R      +G           GL GPIG KG          
Sbjct: 303 KGENGSRGDNGMIGTLGDRGRKGFQGSKGIDGKDGNRGRSGLPGPIGMKGIKGALGDKGE 362

Query: 123 --EIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP---GPQGI 174
             +IG KGE+G KG +G   + G+PG+ G  G  G+ GD+G +G KG  G P   G +G+
Sbjct: 363 NGDIGMKGELGSKGPQGPLGKGGSPGLKGIKGQSGVDGDKGDKGEKGREGGPGVNGTKGL 422

Query: 175 PGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIP-------------------- 211
            G++G +G KG +G  G     G +GR+G  G PG+DGIP                    
Sbjct: 423 TGEKGMKGEKGSIGLQGSKGDTGTNGRNGSIGLPGIDGIPRMPGSKGMLGGPGREGLSGA 482

Query: 212 -------GRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                  G +G+DG+P   GK GLPG++G  G  G  G+KG TGP+G +GK G  G+
Sbjct: 483 KGHQGQTGLSGIDGVPGVAGKRGLPGREGNIGMLGDRGQKGQTGPKGMKGKRGDRGL 539



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 90/184 (48%), Gaps = 33/184 (17%)

Query: 113  GLQGPIG---QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            G +GPIG    +G  G KG+ G+KGERG  G  G  G  G  GI G EG +G KGD G  
Sbjct: 2548 GERGPIGIPGSRGSPGMKGDQGLKGERGPTGEKGFKGQKGDTGIMGTEGMKGVKGDTGIN 2607

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G  G  G  G +G KG  G  G  G +G  G+ G+PG  G PG+   DG+PG+ G PGKD
Sbjct: 2608 GTPGARGSPGLKGIKGFKGTKGIKGANGTKGVEGDPGRRGFPGK---DGLPGRTGPPGKD 2664

Query: 230  GIP------------GTNGTNGEKGMTGP---------------RGNRGKSGINGVPGTP 262
            G P            G  G+NG KG  GP               +G  GK G NG+PG P
Sbjct: 2665 GEPCMKGQKGEKEERGEKGSNGTKGDIGPPGMKGEKGQAGTDGDKGRTGKPGSNGIPGIP 2724

Query: 263  AICA 266
                
Sbjct: 2725 GRAG 2728



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 98/186 (52%), Gaps = 24/186 (12%)

Query: 112  PGLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PG +G  GQKGE G+      KG +G KGERG  G PG  G PG +G  G +G+RGP G+
Sbjct: 2520 PGHRGLPGQKGEKGSPGLKGDKGIVGDKGERGPIGIPGSRGSPGMKGDQGLKGERGPTGE 2579

Query: 166  MGYPGPQG---IPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G+ G +G   I G EG +G KGD G    PG  G  G  G+ G  G  GI G NG  G+
Sbjct: 2580 KGFKGQKGDTGIMGTEGMKGVKGDTGINGTPGARGSPGLKGIKGFKGTKGIKGANGTKGV 2639

Query: 220  ---PGKDGLPGKDGIPGTNG---------TNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
               PG+ G PGKDG+PG  G           G+KG    RG +G +G  G  G P +   
Sbjct: 2640 EGDPGRRGFPGKDGLPGRTGPPGKDGEPCMKGQKGEKEERGEKGSNGTKGDIGPPGMKGE 2699

Query: 268  KRESCS 273
            K ++ +
Sbjct: 2700 KGQAGT 2705



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 87/163 (53%), Gaps = 18/163 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++G  G  G  GA+G  G+KG +G KG  G+ G  G +G+ GD G+RG  G  G PG  
Sbjct: 2599 GVKGDTGINGTPGARGSPGLKGIKGFKGTKGIKGANGTKGVEGDPGRRGFPGKDGLPGRT 2658

Query: 173  GIPG------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G PG                  ++G  G KGD+G PG  G  G+ G  G+ G  G PG N
Sbjct: 2659 GPPGKDGEPCMKGQKGEKEERGEKGSNGTKGDIGPPGMKGEKGQAGTDGDKGRTGKPGSN 2718

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G+ GIPG+ G PG  G+ G  G+ GE+G+ G  G  G SG +G
Sbjct: 2719 GIPGIPGRAGPPGNKGMKGDKGSKGERGLQGETGRTGLSGSDG 2761



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 104/215 (48%), Gaps = 34/215 (15%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------PP 148
             M+G   S  +   PG +GP G++G  G KG MG KG++G KG  G VG         PP
Sbjct: 2350 GMKGCNGSIGDTGLPGPRGPTGKQGLPGDKGSMGRKGDKGPKGDKGAVGRTGQIGKIGPP 2409

Query: 149  GPQGIPGD---------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---- 195
            G +GI G           G RG  G  G PGP+G+   +G+ GPKGD G  G  G+    
Sbjct: 2410 GMKGINGTMGIKGVKGYSGSRGSPGMRGPPGPKGM---KGETGPKGDQGMIGEKGMMGTK 2466

Query: 196  --DGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDGIPGTNGTNGEKGMTGPR 247
               G  GLPG  GL G+ G  G  GI G+ G      + G DG+PG NG+ G  G  G  
Sbjct: 2467 GIKGSTGLPGARGLPGLKGLKGNKGIKGEKGAKGFHGINGTDGVPGRNGSIGIPGHRGLP 2526

Query: 248  GNRGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
            G +G+ G  G+ G   I   K E   + +P S  S
Sbjct: 2527 GQKGEKGSPGLKGDKGIVGDKGERGPIGIPGSRGS 2561



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 86/163 (52%), Gaps = 15/163 (9%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------PQGIPGDEGKRGPKGDMGYP 169
            G+ G IG  G  G+ G++GEKG+PG+ G  G         P GIPG  G  G KGD G  
Sbjct: 2512 GRNGSIGIPGHRGLPGQKGEKGSPGLKGDKGIVGDKGERGPIGIPGSRGSPGMKGDQGLK 2571

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G +G  G++G +G KGD G    +G +G  G+ G+ G++G PG  G  G+ G  G  G  
Sbjct: 2572 GERGPTGEKGFKGQKGDTGI---MGTEGMKGVKGDTGINGTPGARGSPGLKGIKGFKGTK 2628

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
            GI G NGT   KG+ G  G RG  G +G+PG         E C
Sbjct: 2629 GIKGANGT---KGVEGDPGRRGFPGKDGLPGRTGPPGKDGEPC 2668



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 88/159 (55%), Gaps = 6/159 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
            G+ GP+G++G  G  G+ G +GE G KG+ G  G  G +G  G  G+ GP G  G+P P 
Sbjct: 1205 GIVGPLGKRGLQGNTGQKGCQGEPGNKGSKGDQGAFGFRGKSGLNGRIGPSGKDGHPSPP 1264

Query: 172  --QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
              +G PGD+G++G  G  G  G +GL G +G+PG  G  G  G  G DG+PG +G     
Sbjct: 1265 PLRGDPGDKGEKGFIGSPGQKGNVGLKGENGMPGANGHSGPLGDPGNDGLPGANG---ST 1321

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G PG NG  G KG  G +G RG+ G  G+PG       K
Sbjct: 1322 GPPGKNGITGSKGDMGDQGERGEDGEVGLPGKSGATGMK 1360



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 88/178 (49%), Gaps = 30/178 (16%)

Query: 113  GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDM 166
            G QG  G KGE   IG  GE GV+G+ G KG  G VG PGP+G  G     GK GP+GD 
Sbjct: 962  GAQGGPGTKGETGIIGDNGETGVQGDNGTKGDAGRVGKPGPKGTAGLIGFTGKPGPRGDT 1021

Query: 167  GYPGPQGIPG---------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G  GP G  G         D G  G KG  G  G  G++G  G  G  G+DG  G+ G+ 
Sbjct: 1022 GNTGPPGKKGLIGGVGQNGDIGDTGLKGSKGITGPKGVNGSKGDNGSTGMDGRIGKMGLQ 1081

Query: 218  GI---------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+               PG +G+PG+DG  G  G  G KG  GP GN G  GING  G
Sbjct: 1082 GMKGWAGDHGDIGNIGDPGFNGMPGRDGDKGMQGNTGSKGKKGPFGNLGSKGINGCKG 1139



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 103/212 (48%), Gaps = 14/212 (6%)

Query: 50  NSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEY 109
           + +P+ P  + +      E     K  Q  T       L+    +P VA +         
Sbjct: 459 DGIPRMPGSKGMLGGPGREGLSGAKGHQGQT------GLSGIDGVPGVAGK--------R 504

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
             PG +G IG  G+ G KG+ G KG +G++G  G+ G  G +G+ G EG +G KG++G P
Sbjct: 505 GLPGREGNIGMLGDRGQKGQTGPKGMKGKRGDRGLHGLNGTRGLNGSEGIKGVKGEVGPP 564

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G QG  GD G RG  G MG  G  G  G +G+ G PG  G  G  G  GI G +G  G+ 
Sbjct: 565 GNQGPTGDAGDRGMTGTMGMKGENGSGGDNGMIGLPGDRGRKGYQGNKGIDGSNGTDGRR 624

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G PG+ G  G  G  G  G  G  G+ G+PG+
Sbjct: 625 GKPGSVGNKGAIGNKGDNGTDGMVGMKGMPGS 656



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/160 (43%), Positives = 82/160 (51%), Gaps = 12/160 (7%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-------- 164
            GL+G  G KGE GAKG  G+ G  G  G  G +G PG +G+PG +G++G  G        
Sbjct: 2485 GLKGNKGIKGEKGAKGFHGINGTDGVPGRNGSIGIPGHRGLPGQKGEKGSPGLKGDKGIV 2544

Query: 165  -DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
             D G  GP GIPG  G  G KGD G  G  G  G  G  G+ G  GI G  GM G+ G  
Sbjct: 2545 GDKGERGPIGIPGSRGSPGMKGDQGLKGERGPTGEKGFKGQKGDTGIMGTEGMKGVKGDT 2604

Query: 224  GL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+   PG  G PG  G  G KG  G +G  G  G+ G PG
Sbjct: 2605 GINGTPGARGSPGLKGIKGFKGTKGIKGANGTKGVEGDPG 2644



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 89/171 (52%), Gaps = 15/171 (8%)

Query: 113  GLQGPIGQKG------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------GDEGKR 160
            GLQG  GQKG        G+KG+ G  G RG+ G  G +GP G  G P      GD G +
Sbjct: 1214 GLQGNTGQKGCQGEPGNKGSKGDQGAFGFRGKSGLNGRIGPSGKDGHPSPPPLRGDPGDK 1273

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G KG +G PG +G  G +G+ G  G  G+ G +G  G DGLPG  G  G PG+NG+ G  
Sbjct: 1274 GEKGFIGSPGQKGNVGLKGENGMPGANGHSGPLGDPGNDGLPGANGSTGPPGKNGITGSK 1333

Query: 221  ---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
               G  G  G+DG  G  G +G  GM GP G +G  GING  G P     K
Sbjct: 1334 GDMGDQGERGEDGEVGLPGKSGATGMKGPPGEKGSFGINGTDGIPGHTGDK 1384



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 87/183 (47%), Gaps = 18/183 (9%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           + M G      +  P G++G  G +G  G  G  G+ G  G KG  G VGPPG QG  GD
Sbjct: 513 IGMLGDRGQKGQTGPKGMKGKRGDRGLHGLNGTRGLNGSEGIKGVKGEVGPPGNQGPTGD 572

Query: 157 EGKRGPKGDMGYPGPQ---------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            G RG  G MG  G           G+PGD G++G +G+ G  G  G DGR G PG  G 
Sbjct: 573 AGDRGMTGTMGMKGENGSGGDNGMIGLPGDRGRKGYQGNKGIDGSNGTDGRRGKPGSVGN 632

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G  G  G +G    DG+ G  G+PG+      +G  GP G  G +G +G+ G       
Sbjct: 633 KGAIGNKGDNGT---DGMVGMKGMPGS------RGPMGPLGPTGSAGFHGIKGPSGGIGD 683

Query: 268 KRE 270
           K E
Sbjct: 684 KGE 686



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 92/188 (48%), Gaps = 9/188 (4%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   +G      E  PPG QGP G  G+ G  G MG+KGE G  G  G++      G+PG
Sbjct: 548 LNGSEGIKGVKGEVGPPGNQGPTGDAGDRGMTGTMGMKGENGSGGDNGMI------GLPG 601

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D G++G +G+ G  G  G    +G+RG  G +G  G IG  G +G  G  G+ G+PG  G
Sbjct: 602 DRGRKGYQGNKGIDGSNGT---DGRRGKPGSVGNKGAIGNKGDNGTDGMVGMKGMPGSRG 658

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
             G  G  G  G  GI G +G  G+KG  G +G +G +  NG+ G       K E   + 
Sbjct: 659 PMGPLGPTGSAGFHGIKGPSGGIGDKGEKGYKGGQGITRNNGITGITGDVGMKGERGPVG 718

Query: 276 PNSETSQL 283
            N +   +
Sbjct: 719 FNGDEGNI 726



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 93/178 (52%), Gaps = 35/178 (19%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEG 158
            E   PG+ G  G KG+ G+KG+ G+KG         ++G KG+PG VG  G  G  G++G
Sbjct: 2771 EMGTPGINGTDGSKGDKGSKGDKGMKGLPGLDGMKGDKGMKGSPGTVGGIGKTGPRGEKG 2830

Query: 159  KRGPKGDMGYPG----------PQGIPGDEG---KRGPKGDMGYPGRIGLDGRDGLPGEP 205
            ++G  GD G PG          P+G+ G +G   KRG KG +G PG  G+ G  G+ G+ 
Sbjct: 2831 EKGMLGDPGLPGNVTGIMGPTGPKGLVGRQGPPGKRGQKGFIGPPGLKGMKGIKGMKGDD 2890

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGI----------PGTNGT---NGEKGMTGPRGNR 250
            G  G  G  G +G PGK GLPG  G           PG  G     G++GMTGP G++
Sbjct: 2891 GSQGSQGMKGEEGDPGKRGLPGDRGGLPGPQGDIGPPGPQGHKGIKGDRGMTGPPGSK 2948



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 118/262 (45%), Gaps = 50/262 (19%)

Query: 40  VDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAM 99
            D DKG++ DN   +    E  PP       + +    N T                + M
Sbjct: 260 TDGDKGEM-DNEGMKGVTGEVSPPGNRGPTGDADDRGMNGT----------------MGM 302

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G   S  +    G  G  G+KG  G+KG  G  G RG  G PG +G  G +G  GD+G+
Sbjct: 303 KGENGSRGDNGMIGTLGDRGRKGFQGSKGIDGKDGNRGRSGLPGPIGMKGIKGALGDKGE 362

Query: 160 RGP---KGDMGYPGPQ------------------GIPGDEGKRGPKGDMGYP---GRIGL 195
            G    KG++G  GPQ                  G+ GD+G +G KG  G P   G  GL
Sbjct: 363 NGDIGMKGELGSKGPQGPLGKGGSPGLKGIKGQSGVDGDKGDKGEKGREGGPGVNGTKGL 422

Query: 196 DGRDGLPGEP---GLDGIPGRNGMDGIPGKDGLPGKDGIP------GTNGTNGEKGMTGP 246
            G  G+ GE    GL G  G  G +G  G  GLPG DGIP      G  G  G +G++G 
Sbjct: 423 TGEKGMKGEKGSIGLQGSKGDTGTNGRNGSIGLPGIDGIPRMPGSKGMLGGPGREGLSGA 482

Query: 247 RGNRGKSGINGVPGTPAICAYK 268
           +G++G++G++G+ G P +   +
Sbjct: 483 KGHQGQTGLSGIDGVPGVAGKR 504



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 74/156 (47%), Gaps = 30/156 (19%)

Query: 135  ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
            E+G+KG+PG +G  G  G PG++G  G KGD G  G +G PG +G+RG KGD        
Sbjct: 1797 EKGDKGSPGPIGDKGDIGPPGEKGNNGTKGDKGSKGMEGDPGPKGERGEKGD-------- 1848

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---------GMTG 245
                      PG+DGI   NG  G PG DG+ G++G  G  G  G +         G TG
Sbjct: 1849 ----------PGIDGI---NGTRGPPGIDGMDGQNGTKGNQGLQGRRGKPGLPGDVGRTG 1895

Query: 246  PRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
            P G  G SG  G+PG       K       PN  T 
Sbjct: 1896 PPGINGTSGPRGLPGKTGPPGPKGMKGQQGPNGTTG 1931



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 66/116 (56%), Gaps = 9/116 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGY 168
            PG  GP G KG  G +G  G  G +G KG PG +GP GP   +G+PG +G+ G  G+ G 
Sbjct: 1909 PGKTGPPGPKGMKGQQGPNGTTGMKGMKGEPGPIGPSGPSGRKGLPGLQGETGNPGEKGN 1968

Query: 169  PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDG 218
            PG QG PG +G +G    KG+ G  G  GL GR G P   GE G  G+PG NG  G
Sbjct: 1969 PGRQGKPGPQGMKGSHGFKGEKGEKGNEGLRGRAGKPGPMGEKGNTGLPGLNGTTG 2024



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 101/223 (45%), Gaps = 5/223 (2%)

Query: 35  RFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRI 94
           + +  VD DKGD  +      P V        E+  + EK       +      N   R 
Sbjct: 393 KGQSGVDGDKGDKGEKGREGGPGVNGTKGLTGEKGMKGEKGSIGLQGSKGDTGTNG--RN 450

Query: 95  PLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
             + + G     +     G+ G  G++G  GAKG  G  G  G  G PGV G    +G+P
Sbjct: 451 GSIGLPGIDGIPRMPGSKGMLGGPGREGLSGAKGHQGQTGLSGIDGVPGVAGK---RGLP 507

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G EG  G  GD G  G  G  G +GKRG +G  G  G  GL+G +G+ G  G  G PG  
Sbjct: 508 GREGNIGMLGDRGQKGQTGPKGMKGKRGDRGLHGLNGTRGLNGSEGIKGVKGEVGPPGNQ 567

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G+ G  G+ G NG+ G+ GM G  G+RG+ G  G
Sbjct: 568 GPTGDAGDRGMTGTMGMKGENGSGGDNGMIGLPGDRGRKGYQG 610



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 96/225 (42%), Gaps = 48/225 (21%)

Query: 97  VAMQGFCNSTKEYCP------PGLQGPIGQKGEIGAKGEMGVKGERG------------E 138
           + M+G   S     P      PGL+G  GQ G  G KG+ G KG  G            E
Sbjct: 366 IGMKGELGSKGPQGPLGKGGSPGLKGIKGQSGVDGDKGDKGEKGREGGPGVNGTKGLTGE 425

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP---------GDEGKRGPKGDMGY 189
           KG  G  G  G QG  GD G  G  G +G PG  GIP         G  G+ G  G  G+
Sbjct: 426 KGMKGEKGSIGLQGSKGDTGTNGRNGSIGLPGIDGIPRMPGSKGMLGGPGREGLSGAKGH 485

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGR------------------NGMDGIPGKDGLPGKDGI 231
            G+ GL G DG+PG  G  G+PGR                   GM G  G  GL G +G 
Sbjct: 486 QGQTGLSGIDGVPGVAGKRGLPGREGNIGMLGDRGQKGQTGPKGMKGKRGDRGLHGLNGT 545

Query: 232 PGTNGTNGEKGM---TGPRGNRGKSGINGVPGTPAICAYKRESCS 273
            G NG+ G KG+    GP GN+G +G  G  G       K E+ S
Sbjct: 546 RGLNGSEGIKGVKGEVGPPGNQGPTGDAGDRGMTGTMGMKGENGS 590



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +GP+G  G    KG  G  GE+G+KG+PG +G  G  G PG++G  G KGD G  G +
Sbjct: 2060 GDEGPLGPPGR---KGLPGPPGEKGDKGSPGPIGDKGDIGPPGEKGNNGTKGDKGNKGME 2116

Query: 173  GIPGDEGK---------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G  G +G+               RGPKGD G  G  G  G  G  GE G+ G  G  G  
Sbjct: 2117 GDRGPKGEKADKGGPGPDGDKGERGPKGDPGAKGNKGDRGPKGNKGEKGIKGDKGDKGDI 2176

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G PG+ G  G+ G  G  G  G++G  GP+GN G  G  G PG    C
Sbjct: 2177 GPPGEKGGIGERGEKGEKGMKGDQGDVGPKGNDGPHGPVGDPGPQGPC 2224



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 77/144 (53%), Gaps = 8/144 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ GP G KG +G     G  G+RG+K   G +GPPG +G+ G +G +G  G  G  G +
Sbjct: 2846 GIMGPTGPKGLVG---RQGPPGKRGQK---GFIGPPGLKGMKGIKGMKGDDGSQGSQGMK 2899

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G  GD GKRG  GD G  G  G  G  G PG  G  GI G  GM G PG    PG  G  
Sbjct: 2900 GEEGDPGKRGLPGDRG--GLPGPQGDIGPPGPQGHKGIKGDRGMTGPPGSKCPPGPSGDT 2957

Query: 233  GTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G  G+KG  G +G+RG  G+N
Sbjct: 2958 GPKGYKGDKGSIGNKGDRGPPGMN 2981



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 101/249 (40%), Gaps = 79/249 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG-----------AP---GVVGPPGPQGIPGDE 157
           PGL+G +G  G IG  G+ G+ G RG+KG            P   G VGP G +G  GD+
Sbjct: 735 PGLKGQMGNTGHIGGTGDKGIVGSRGDKGMMGDKGDMGDIGPTVNGSVGPKGFKGEKGDK 794

Query: 158 GKRGPKGDMGYPGPQGI------PGD-----EGKRGPKGD-------------------- 186
           G RGPKG +G+ GP+G       PGD     +G+ GP GD                    
Sbjct: 795 GNRGPKGGIGFEGPKGTKGMNGPPGDGVIGSKGEMGPFGDPGSRGDDGEIGMTGDDGDDG 854

Query: 187 -------------------MGYPGRIGLDGR---------------DGLPGEPGLDGIPG 212
                               G+PG IG DG                 G  G PG  GI G
Sbjct: 855 ETGFKGFKGMTGDRDARGLKGFPGMIGDDGNVGSHGAIGPAGSIGSKGNTGPPGGKGIRG 914

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
             G  GI G  G+ G +G  G  G +GE G  G  GN+G  G+ G+ G       K E+ 
Sbjct: 915 SIGSTGIIGNKGMQGVNGDLGMRGDDGEPGEKGFMGNKGYRGLRGITGAQGGPGTKGETG 974

Query: 273 SLLPNSETS 281
            +  N ET 
Sbjct: 975 IIGDNGETG 983



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 83/164 (50%), Gaps = 20/164 (12%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              + GF          G  GP G+KG IG  G+ G  G+ G KG+ G+ GP G  G  GD
Sbjct: 1006 AGLIGFTGKPGPRGDTGNTGPPGKKGLIGGVGQNGDIGDTGLKGSKGITGPKGVNGSKGD 1065

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G  G  G +G  G QG+      +G  GD G  G I         G+PG +G+PGR+G 
Sbjct: 1066 NGSTGMDGRIGKMGLQGM------KGWAGDHGDIGNI---------GDPGFNGMPGRDGD 1110

Query: 217  DGIPGKDGLPGKDGIP----GTNGTNGEKGMTGPRGNRGKSGIN 256
             G+ G  G  GK G P    G+ G NG KG TG  G+RG++G+N
Sbjct: 1111 KGMQGNTGSKGKKG-PFGNLGSKGINGCKGNTGNPGDRGRTGLN 1153



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 73/150 (48%), Gaps = 12/150 (8%)

Query: 126 AKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           A G  G KGE    G KG  G V PPG +G  GD   RG  G MG          +G+ G
Sbjct: 257 AAGTDGDKGEMDNEGMKGVTGEVSPPGNRGPTGDADDRGMNGTMGM---------KGENG 307

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            +GD G  G +G  GR G  G  G+DG  G  G  G+PG  G+ G  G  G  G NG+ G
Sbjct: 308 SRGDNGMIGTLGDRGRKGFQGSKGIDGKDGNRGRSGLPGPIGMKGIKGALGDKGENGDIG 367

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESC 272
           M G  G++G  G  G  G+P +   K +S 
Sbjct: 368 MKGELGSKGPQGPLGKGGSPGLKGIKGQSG 397



 Score = 47.4 bits (111), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 77/152 (50%), Gaps = 6/152 (3%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G  G IG  G +G KG  G  G  G+ G  G  GI G++G +G  GD+G  G  G PG+
Sbjct: 886  VGSHGAIGPAGSIGSKGNTGPPGGKGIRGSIGSTGIIGNKGMQGVNGDLGMRGDDGEPGE 945

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGT 234
            +G  G K   GY G  G+ G  G PG  G  GI G NG  G+ G +G     G+ G PG 
Sbjct: 946  KGFMGNK---GYRGLRGITGAQGGPGTKGETGIIGDNGETGVQGDNGTKGDAGRVGKPGP 1002

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             GT G  G TG  G RG +G  G PG   +  
Sbjct: 1003 KGTAGLIGFTGKPGPRGDTGNTGPPGKKGLIG 1034



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 85/205 (41%), Gaps = 48/205 (23%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQG 152
            +   QG   +T      G  GPIG  G  G KG  G++GE G   EKG PG  G PGPQG
Sbjct: 1920 MKGQQGPNGTTGMKGMKGEPGPIGPSGPSGRKGLPGLQGETGNPGEKGNPGRQGKPGPQG 1979

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-------------------- 192
            + G  G +G KG+ G  G +G  G  G  G KG+ G PG                     
Sbjct: 1980 MKGSHGFKGEKGEKGNEGLRGRAGKPGPMGEKGNTGLPGLNGTTGPIGRPGKMGPPGPPG 2039

Query: 193  -------------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
                                     +G  GR GLPG PG  G  G  G  G  G  G PG
Sbjct: 2040 PPGMKGMKGMKGMKGMNGSRGDEGPLGPPGRKGLPGPPGEKGDKGSPGPIGDKGDIGPPG 2099

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGK 252
            + G  GT G  G KGM G RG +G+
Sbjct: 2100 EKGNNGTKGDKGNKGMEGDRGPKGE 2124



 Score = 46.6 bits (109), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 89/206 (43%), Gaps = 55/206 (26%)

Query: 123  EIGAKGEMGVKGE---------------RGEKGAPGVVGPP------------GPQGIPG 155
            E G KG+ G KG                +G+KG  G +GPP            G +G+ G
Sbjct: 2139 ERGPKGDPGAKGNKGDRGPKGNKGEKGIKGDKGDKGDIGPPGEKGGIGERGEKGEKGMKG 2198

Query: 156  DEGKRGPKGD------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR----------- 198
            D+G  GPKG+      +G PGPQG P ++G  GP+GD G  G  G +GR           
Sbjct: 2199 DQGDVGPKGNDGPHGPVGDPGPQG-PCEKGNPGPRGDKGQKGENGPEGRMGPKGLKGKKG 2257

Query: 199  ----------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
                       G PG  G  G PG  G  G  G  G+ G+ G PG  G+ G+ G+ G +G
Sbjct: 2258 EIGMRGPMGDKGPPGNDGPRGFPGDKGNQGPKGNQGITGRTGKPGRKGSKGDMGLKGEKG 2317

Query: 249  NRGKSGINGVPGTPAICAYKRESCSL 274
             +G  G  G PG P     K    S+
Sbjct: 2318 LKGLQGRFGKPGLPGAKGEKGMKGSI 2343



 Score = 45.8 bits (107), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 97/203 (47%), Gaps = 41/203 (20%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---ERGEKGA---PGVVGPPGPQGI 153
            +G    T      G  GP G KG++G  G  G+ G    +G+KG+    G+ G PG  G+
Sbjct: 2745 RGLQGETGRTGLSGSDGPKGDKGDVGEMGTPGINGTDGSKGDKGSKGDKGMKGLPGLDGM 2804

Query: 154  PGDE------------GKRGPKGD-------------------MGYPGPQGIPGDE---G 179
             GD+            GK GP+G+                   MG  GP+G+ G +   G
Sbjct: 2805 KGDKGMKGSPGTVGGIGKTGPRGEKGEKGMLGDPGLPGNVTGIMGPTGPKGLVGRQGPPG 2864

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG-KDGIPGTNGTN 238
            KRG KG +G PG  G+ G  G+ G+ G  G  G  G +G PGK GLPG + G+PG  G  
Sbjct: 2865 KRGQKGFIGPPGLKGMKGIKGMKGDDGSQGSQGMKGEEGDPGKRGLPGDRGGLPGPQGDI 2924

Query: 239  GEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G +G +G  G+ G PG+
Sbjct: 2925 GPPGPQGHKGIKGDRGMTGPPGS 2947



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 15/157 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G +G KG  G +G  G +G  G KG  G++G  G  G+ GD G +G  G +G PGP
Sbjct: 943  PGEKGFMGNKGYRGLRGITGAQGGPGTKGETGIIGDNGETGVQGDNGTKGDAGRVGKPGP 1002

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            +G  G                IG  G+ G  G+ G  G PG+ G+ G  G++G  G  G+
Sbjct: 1003 KGTAG---------------LIGFTGKPGPRGDTGNTGPPGKKGLIGGVGQNGDIGDTGL 1047

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G+ G  G KG+ G +G+ G +G++G  G   +   K
Sbjct: 1048 KGSKGITGPKGVNGSKGDNGSTGMDGRIGKMGLQGMK 1084



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 85/177 (48%), Gaps = 15/177 (8%)

Query: 96   LVAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPG 149
             +   G   S     PPG   ++G IG  G IG KG  GV G+   RG+ G PG  G  G
Sbjct: 891  AIGPAGSIGSKGNTGPPGGKGIRGSIGSTGIIGNKGMQGVNGDLGMRGDDGEPGEKGFMG 950

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             +G  G  G  G +G  G  G  GI GD G+ G +GD G  G  G  G+ G  G  GL G
Sbjct: 951  NKGYRGLRGITGAQGGPGTKGETGIIGDNGETGVQGDNGTKGDAGRVGKPGPKGTAGLIG 1010

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGING 257
              G+ G  G  G  G PGK G+ G  G NG+         KG+TGP+G  G  G NG
Sbjct: 1011 FTGKPGPRGDTGNTGPPGKKGLIGGVGQNGDIGDTGLKGSKGITGPKGVNGSKGDNG 1067



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 88/229 (38%), Gaps = 72/229 (31%)

Query: 92   SRIPLVAMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGE---RGEKGAPGVV 145
             R  L  +QG   +  E   PG QG   P G KG  G KGE G KG    RG  G PG +
Sbjct: 1949 GRKGLPGLQGETGNPGEKGNPGRQGKPGPQGMKGSHGFKGEKGEKGNEGLRGRAGKPGPM 2008

Query: 146  GPPGPQGIPG------------------------------------------DEGKRGPK 163
            G  G  G+PG                                          DEG  GP 
Sbjct: 2009 GEKGNTGLPGLNGTTGPIGRPGKMGPPGPPGPPGMKGMKGMKGMKGMNGSRGDEGPLGPP 2068

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G  G PGP   PG+      KGD G PG IG  G  G PGE G +G  G  G  G+ G  
Sbjct: 2069 GRKGLPGP---PGE------KGDKGSPGPIGDKGDIGPPGEKGNNGTKGDKGNKGMEGDR 2119

Query: 224  GLPGKD---------------GIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G+                G  G  G  G KG  GP+GN+G+ GI G
Sbjct: 2120 GPKGEKADKGGPGPDGDKGERGPKGDPGAKGNKGDRGPKGNKGEKGIKG 2168



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 85/212 (40%), Gaps = 69/212 (32%)

Query: 113  GLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG-------------- 155
            G+ GP+G KG    +G KGE G +G RG  G PG +G  G  G PG              
Sbjct: 1697 GIPGPVGMKGFPGSMGQKGEKGNQGARGRSGKPGPIGEKGDTGPPGLNGTTGSIGRPGKM 1756

Query: 156  ----------------------DEGKRG------------PKGDMGYPGPQGIPGDEGKR 181
                                    G RG             KGD G PGP G        
Sbjct: 1757 GPPGHPGPPGMKGMKGMKGMKGMNGSRGDEGPLGPPGTPGEKGDKGSPGPIGD------- 1809

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---------GMDGIPGKDGLPGKDGIP 232
              KGD+G PG  G +G  G  G  G++G PG           G+DGI G  G PG DG+ 
Sbjct: 1810 --KGDIGPPGEKGNNGTKGDKGSKGMEGDPGPKGERGEKGDPGIDGINGTRGPPGIDGMD 1867

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G NGT G +G+ G RG  G  G  G  G P I
Sbjct: 1868 GQNGTKGNQGLQGRRGKPGLPGDVGRTGPPGI 1899



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 118/313 (37%), Gaps = 57/313 (18%)

Query: 12   IPTLNCQ-------AYTLDKPIISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPD 64
            +P L  Q         T DK I     V +R  + +  DKGD+ D           + P 
Sbjct: 734  LPGLKGQMGNTGHIGGTGDKGI-----VGSRGDKGMMGDKGDMGD-----------IGPT 777

Query: 65   LYEEIRER--EKEQQNSTHNNPWVWLNAYSRIPLVAMQG-----FCNSTKEYCPPGLQGP 117
            +   +  +  + E+ +  +  P   +          M G        S  E  P G  G 
Sbjct: 778  VNGSVGPKGFKGEKGDKGNRGPKGGIGFEGPKGTKGMNGPPGDGVIGSKGEMGPFGDPGS 837

Query: 118  IGQKGEIGA---------------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
             G  GEIG                KG  G +  RG KG PG++G     G  G  G  GP
Sbjct: 838  RGDDGEIGMTGDDGDDGETGFKGFKGMTGDRDARGLKGFPGMIGD---DGNVGSHGAIGP 894

Query: 163  KGDMGYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G +G  G  G PG +G RG          KG  G  G +G+ G DG PGE G  G  G 
Sbjct: 895  AGSIGSKGNTGPPGGKGIRGSIGSTGIIGNKGMQGVNGDLGMRGDDGEPGEKGFMGNKGY 954

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
             G+ GI G  G PG  G  G  G NGE G+ G  G +G +G  G PG          +  
Sbjct: 955  RGLRGITGAQGGPGTKGETGIIGDNGETGVQGDNGTKGDAGRVGKPGPKGTAGLIGFTGK 1014

Query: 274  LLPNSETSQLLIP 286
              P  +T     P
Sbjct: 1015 PGPRGDTGNTGPP 1027



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 85/188 (45%), Gaps = 19/188 (10%)

Query: 74  KEQQNSTHNNPWVWL-NAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV 132
           K +  S  +N  + L     R      +G   S       G  G +G KG IG KG+ G 
Sbjct: 585 KGENGSGGDNGMIGLPGDRGRKGYQGNKGIDGSNGTDGRRGKPGSVGNKGAIGNKGDNGT 644

Query: 133 KGERGEKGAPGVVGPPGP---------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
            G  G KG PG  GP GP          GI G  G  G KG+ GY G QGI  + G  G 
Sbjct: 645 DGMVGMKGMPGSRGPMGPLGPTGSAGFHGIKGPSGGIGDKGEKGYKGGQGITRNNGITGI 704

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            GD      +G+ G  G  G  G +G  G  GM G+P   GL G+ G  G  G  G+KG+
Sbjct: 705 TGD------VGMKGERGPVGFNGDEGNIGDKGMKGLP---GLKGQMGNTGHIGGTGDKGI 755

Query: 244 TGPRGNRG 251
            G RG++G
Sbjct: 756 VGSRGDKG 763



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 88/182 (48%), Gaps = 14/182 (7%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +V M+G   S     P G  G  G  G  G  G +G KGE+G KG  G+    G  GI G
Sbjct: 647 MVGMKGMPGSRGPMGPLGPTGSAGFHGIKGPSGGIGDKGEKGYKGGQGITRNNGITGITG 706

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRG-P--KGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           D G +G +G +G+ G +G  GD+G +G P  KG MG  G IG  G  G+ G  G  G+ G
Sbjct: 707 DVGMKGERGPVGFNGDEGNIGDKGMKGLPGLKGQMGNTGHIGGTGDKGIVGSRGDKGMMG 766

Query: 213 RNG--------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G        ++G  G  G  G+ G  G  G  G  G  GP+G +   G+NG PG   I
Sbjct: 767 DKGDMGDIGPTVNGSVGPKGFKGEKGDKGNRGPKGGIGFEGPKGTK---GMNGPPGDGVI 823

Query: 265 CA 266
            +
Sbjct: 824 GS 825



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 64/132 (48%), Gaps = 15/132 (11%)

Query: 142  PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM------------GY 189
            PG  G PG +G+ G  G +G KG  G PG +G P   G RG  G M            G 
Sbjct: 1621 PGPPGSPGERGLRGKPGSKGDKGASGLPGLKGEP---GPRGRPGKMGPQGPTGPGGMKGE 1677

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             G  G+ G  GL G  G  GIPG  GM G PG  G  G+ G  G  G +G+ G  G +G+
Sbjct: 1678 KGNEGMKGDQGLKGAAGKKGIPGPVGMKGFPGSMGQKGEKGNQGARGRSGKPGPIGEKGD 1737

Query: 250  RGKSGINGVPGT 261
             G  G+NG  G+
Sbjct: 1738 TGPPGLNGTTGS 1749


>gi|360043237|emb|CCD78650.1| hypothetical protein Smp_197370 [Schistosoma mansoni]
          Length = 1308

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/192 (40%), Positives = 102/192 (53%), Gaps = 48/192 (25%)

Query: 114 LQGPIG---QKGEIGAKGEMGVKGERGEKGAPGV---------VGPPGPQGIPGDEGKRG 161
           L+GP+G   +KGE G  G  GV+G RG+ GAPG+         VGP GP G P   G+ G
Sbjct: 138 LKGPVGLKGKKGERGDPGRDGVEGIRGDIGAPGLMGRTGARGGVGPAGPSGTP---GQVG 194

Query: 162 PKGDMGYP------------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           P G  G P                  GP G  G+ G+ G +G +G PG+ GLDG+ G PG
Sbjct: 195 PAGADGLPGAQGPPGPQGLPGEPGAIGPTGDQGEVGEVGIRGGVGEPGKPGLDGKPGRPG 254

Query: 204 EPGLDGIPGRNGMD---------GIPGKDGLPGKDGIPGTNGTNGEK------GMTGPRG 248
           E G+ G PG++G+          G PG +G+PG  G PGT+G+ GE+      G++GP G
Sbjct: 255 EQGIQGPPGKDGIQGQKGDIGFRGAPGPEGMPGPRGAPGTSGSPGEQGTKGSIGVSGPSG 314

Query: 249 NRGKSGINGVPG 260
           NRG  G  G PG
Sbjct: 315 NRGPQGNAGPPG 326



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 81/152 (53%), Gaps = 12/152 (7%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI--- 193
           G  G PG  G  GP G+ GD G++GP+G+ G PG  G+PG +G++G KG +G  G +   
Sbjct: 440 GSSGIPGTTGASGPPGLQGDIGQQGPQGERGLPGSVGLPGPKGEKGEKGPLGEAGAVGDA 499

Query: 194 ---GLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
              G  G+ G  GE G  G+      PG  G  G PG  G PGKDG PG +  +GE G T
Sbjct: 500 GPPGPQGKQGPIGEKGFQGLIGNVGSPGLRGPRGDPGPSGDPGKDGTPGVDAPDGEVGAT 559

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           GP G +G  G  G PG   +   K E  S+ P
Sbjct: 560 GPEGPQGPVGPAGQPGPRGLPGTKGEPGSIGP 591



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 100/249 (40%), Gaps = 85/249 (34%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGE------------IGAKGEMGVKGERGEKGAPGV 144
               G   +T    PPGLQG IGQ+G              G KGE G KG  GE GA G 
Sbjct: 439 AGSSGIPGTTGASGPPGLQGDIGQQGPQGERGLPGSVGLPGPKGEKGEKGPLGEAGAVGD 498

Query: 145 VGPPGPQGIPG---------------DEGKRGPKGDMGYPGPQGIPGD------------ 177
            GPPGPQG  G                 G RGP+GD   PGP G PG             
Sbjct: 499 AGPPGPQGKQGPIGEKGFQGLIGNVGSPGLRGPRGD---PGPSGDPGKDGTPGVDAPDGE 555

Query: 178 ------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM--------------- 216
                 EG +GP G  G PG  GL G  G PG  G  GIPGR G+               
Sbjct: 556 VGATGPEGPQGPVGPAGQPGPRGLPGTKGEPGSIGPIGIPGRMGVMGIPGAPGPSGPNGP 615

Query: 217 ------DGIPGKDGLPGKDGIPGTNGTNGEK-------------GMTGPRGNRGKSGIN- 256
                  GI G  G+PGKDG PG+ G  G +             G+ GP G  G +G+  
Sbjct: 616 PGFKGDRGISGAHGIPGKDGQPGSPGPIGARGPPGAIHVGGRSLGIMGPPGPVGDNGVQG 675

Query: 257 --GVPGTPA 263
             GVPG P 
Sbjct: 676 DVGVPGMPG 684



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 97/236 (41%), Gaps = 63/236 (26%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPKG 164
           PPG  G  GQKG+IG +G  G +G  G +GAPG  G PG Q      G+ G  G RGP+G
Sbjct: 261 PPGKDGIQGQKGDIGFRGAPGPEGMPGPRGAPGTSGSPGEQGTKGSIGVSGPSGNRGPQG 320

Query: 165 DM---------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           +                      G PG QG PG +G  G  G  G PGR G+DGR G+PG
Sbjct: 321 NAGPPGVIGPRGLPGPPGEVGKPGIPGSQGPPGAKGSAGVAGSPGAPGRPGIDGRPGVPG 380

Query: 204 EPGLDGIPGRNGMDGIPGKDGL------------------------------------PG 227
             G  G  G+ G  G PG+ G                                      G
Sbjct: 381 PAGKSGPMGKTGPRGEPGQAGQDGKPGRIGPPGPPGENGRDGIPGASGPPGPPGQPGKAG 440

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
             GIPGT G +G  G+ G  G +G  G  G+PG+  +   K E     P  E   +
Sbjct: 441 SSGIPGTTGASGPPGLQGDIGQQGPQGERGLPGSVGLPGPKGEKGEKGPLGEAGAV 496



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 89/187 (47%), Gaps = 54/187 (28%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------QGIPGDEGKRGPKGDMGYP 169
           GP G +GE+G   E+G++G  GE G PG+ G PG       QG PG +G +G KGD+G+ 
Sbjct: 221 GPTGDQGEVG---EVGIRGGVGEPGKPGLDGKPGRPGEQGIQGPPGKDGIQGQKGDIGF- 276

Query: 170 GPQGIPGDEGKRGPK---------GDMGYPGRIGLDGRD--------------------- 199
             +G PG EG  GP+         G+ G  G IG+ G                       
Sbjct: 277 --RGAPGPEGMPGPRGAPGTSGSPGEQGTKGSIGVSGPSGNRGPQGNAGPPGVIGPRGLP 334

Query: 200 ------GLPGEPGLDGIPGRNGMDGI------PGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                 G PG PG  G PG  G  G+      PG+ G+ G+ G+PG  G +G  G TGPR
Sbjct: 335 GPPGEVGKPGIPGSQGPPGAKGSAGVAGSPGAPGRPGIDGRPGVPGPAGKSGPMGKTGPR 394

Query: 248 GNRGKSG 254
           G  G++G
Sbjct: 395 GEPGQAG 401



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 62/122 (50%), Gaps = 15/122 (12%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
            G  G  G +G RG KGA G  G  GP+G PG++G++GP+G  G PG  G+ G  G+RG 
Sbjct: 860 AGPTGPQGPQGPRGSKGAKGPPGSEGPEGPPGEDGEQGPEGLAGPPGEPGLDGPRGQRGI 919

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGI---------------PGRNGMDGIPGKDGLPGK 228
            G +G  G +G  G+DG PG  G  G+                G  G DG  G  GLPG 
Sbjct: 920 PGPLGPVGEVGQPGQDGRPGPQGERGVSGKPGLPGPPGVKGAAGETGPDGQDGSSGLPGS 979

Query: 229 DG 230
            G
Sbjct: 980 PG 981



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 55/110 (50%), Gaps = 21/110 (19%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             GP GPQG  G  G +G KG  G  GP+G PG++G++GP+G                  
Sbjct: 859 AAGPTGPQGPQGPRGSKGAKGPPGSEGPEGPPGEDGEQGPEG------------------ 900

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
              L G PG  G+DG  G+ G+PG  G  G  G  G+ G  GP+G RG S
Sbjct: 901 ---LAGPPGEPGLDGPRGQRGIPGPLGPVGEVGQPGQDGRPGPQGERGVS 947



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 74/179 (41%), Gaps = 57/179 (31%)

Query: 130 MGVKGERGEKGAPG---------------------------------VVGPPGPQGIPGD 156
           +G  G+ G  GAPG                                   GP GPQG  G 
Sbjct: 812 VGEPGDVGSPGAPGRDGPIGMIGMRGSSGGPGPRGPPGPPGLSGPQGAAGPTGPQGPQGP 871

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G +G KG  G  GP+G PG++G++GP+G  G PG  GLDG        G  GIPG  G 
Sbjct: 872 RGSKGAKGPPGSEGPEGPPGEDGEQGPEGLAGPPGEPGLDGPR------GQRGIPGPLGP 925

Query: 217 DGIPGKDGLPGKDGIPGTNGTNG---------------EKGMTGPRGNRGKSGINGVPG 260
               G+ G PG+DG PG  G  G                 G TGP G  G SG+ G PG
Sbjct: 926 V---GEVGQPGQDGRPGPQGERGVSGKPGLPGPPGVKGAAGETGPDGQDGSSGLPGSPG 981



 Score = 45.8 bits (107), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 78/166 (46%), Gaps = 33/166 (19%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +G  GAKG  GV G  G  G PG+ G PG   +PG  GK GP   MG  GP+G PG  
Sbjct: 347 GSQGPPGAKGSAGVAGSPGAPGRPGIDGRPG---VPGPAGKSGP---MGKTGPRGEPGQA 400

Query: 179 GKRGPKGDMGYPGRIGLDGRD---------------------GLPGEPGLDGIPGRN--- 214
           G+ G  G +G PG  G +GRD                     G+PG  G  G PG     
Sbjct: 401 GQDGKPGRIGPPGPPGENGRDGIPGASGPPGPPGQPGKAGSSGIPGTTGASGPPGLQGDI 460

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G+ GLPG  G+PG  G  GEK   GP G  G  G  G PG
Sbjct: 461 GQQGPQGERGLPGSVGLPGPKGEKGEK---GPLGEAGAVGDAGPPG 503



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 73/194 (37%), Gaps = 67/194 (34%)

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---------------------PGRIGLDGR 198
           +GP G  G  G +G PG +G  G +GD+G                      PG++G  G 
Sbjct: 139 KGPVGLKGKKGERGDPGRDGVEGIRGDIGAPGLMGRTGARGGVGPAGPSGTPGQVGPAGA 198

Query: 199 DGL---------------------------------------PGEPGLDGIPGRNGMDGI 219
           DGL                                       PG+PGLDG PGR G  GI
Sbjct: 199 DGLPGAQGPPGPQGLPGEPGAIGPTGDQGEVGEVGIRGGVGEPGKPGLDGKPGRPGEQGI 258

Query: 220 ---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
              PGKDG+ G+ G  G  G  G +GM GPRG  G SG  G  GT         S +  P
Sbjct: 259 QGPPGKDGIQGQKGDIGFRGAPGPEGMPGPRGAPGTSGSPGEQGTKGSIGVSGPSGNRGP 318

Query: 277 NSETSQLLIPPTIV 290
                    PP ++
Sbjct: 319 QGNAG----PPGVI 328



 Score = 40.0 bits (92), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 28/41 (68%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           GIPG  G +GP+G  G  GPQGIPG  G  GP+G+ G PG+
Sbjct: 744 GIPGVRGPQGPRGLPGRQGPQGIPGKAGLSGPQGETGLPGK 784


>gi|317419754|emb|CBN81790.1| Collagen alpha-1(XI) chain [Dicentrarchus labrax]
          Length = 1827

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 77/149 (51%), Gaps = 12/149 (8%)

Query: 129 EMGVKGERGEKGAPGVVGPP------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           E G +G  G  G PG  GPP      GP G  G +G  GP+G +GYPGP+G+ G +G RG
Sbjct: 735 EKGPQGRSGLPGLPGADGPPGHPGKEGPAGEKGAQGPSGPQGPIGYPGPRGVKGADGVRG 794

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            KG  G        G DG PG  G  GI G  G  GI G  G  G +G  G +G NGE G
Sbjct: 795 LKGSKGE------KGEDGFPGFKGDMGIKGDRGELGIIGPRGEDGPEGPKGRSGPNGESG 848

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRES 271
             GP G +GK G+ G+PG P     K  S
Sbjct: 849 PLGPAGEKGKLGVPGLPGYPGRQGPKGSS 877



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 74/146 (50%), Gaps = 3/146 (2%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G         P G QGPIG  G  G KG  GV+G +G KG  G  G P   G  GD G 
Sbjct: 760 EGPAGEKGAQGPSGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFP---GFKGDMGI 816

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G +G++G  GP+G  G EG +G  G  G  G +G  G  G  G PGL G PGR G  G 
Sbjct: 817 KGDRGELGIIGPRGEDGPEGPKGRSGPNGESGPLGPAGEKGKLGVPGLPGYPGRQGPKGS 876

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G  G PG +G  G  G  G+ G+ G
Sbjct: 877 SGFPGFPGANGEKGARGVAGKPGLRG 902



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 63/134 (47%), Gaps = 9/134 (6%)

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPG 212
           ++G +G  G  G PG  G PG  GK GP G+ G  G  G  G  G PG  G+   DG+ G
Sbjct: 735 EKGPQGRSGLPGLPGADGPPGHPGKEGPAGEKGAQGPSGPQGPIGYPGPRGVKGADGVRG 794

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
             G  G  G+DG PG  G  G  G  GE G+ GPRG  G  G  G  G         ES 
Sbjct: 795 LKGSKGEKGEDGFPGFKGDMGIKGDRGELGIIGPRGEDGPEGPKGRSGP------NGESG 848

Query: 273 SLLPNSETSQLLIP 286
            L P  E  +L +P
Sbjct: 849 PLGPAGEKGKLGVP 862



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 98/237 (41%), Gaps = 81/237 (34%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAK------------GEMGVKGERGEKGAPGV 144
             ++G         P G+QGP GQ G+ G +            GE G KG+RG  G PG+
Sbjct: 571 AGLKGESGDPGPQGPRGVQGPPGQSGKAGKRGRAGADGGRGMPGEPGSKGDRGFDGLPGL 630

Query: 145 VGPPGPQG---------IPGDEGKRGPKGDMGYPGPQGIPGD------------------ 177
            G  G +G          PG++G+RG  G++   GP+G+ G+                  
Sbjct: 631 PGEKGHRGELGPMGPPGAPGEDGQRGEDGEI---GPRGLAGESGPRGLLGPRGPPGPPGS 687

Query: 178 ------EGKRGPKGDM------------GYPG---------------RIGLDGRDGLPGE 204
                 +G  GPKG+M            G PG                 G  GR GLPG 
Sbjct: 688 PGVAGVDGPSGPKGNMGPQGEPGPPGQQGIPGTQGLPGPQGPIGPPGEKGPQGRSGLPGL 747

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG DG PG       PGK+G  G+ G  G +G  G  G  GPRG +G  G+ G+ G+
Sbjct: 748 PGADGPPGH------PGKEGPAGEKGAQGPSGPQGPIGYPGPRGVKGADGVRGLKGS 798



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 78/184 (42%), Gaps = 51/184 (27%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---------------------KR 160
            G+ GAKG+ G +G  G+ G PG+ G PG +G+PG  G                     +R
Sbjct: 1025 GKEGAKGDPGPQGSTGKDGPPGLRGFPGERGLPGATGPAGLKGGEGPQGPPGPVGSPGER 1084

Query: 161  GPKGDMGYPG---------------PQGIPGDEGKRGPKGDMGYPGRIGL---------- 195
            GP G  G  G                +G PG++G +GP G  G  G +GL          
Sbjct: 1085 GPAGAAGPIGLSGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPQGPP 1144

Query: 196  --DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
              DG  G  GEPG  G     G  G PG  GL G  G PG  G +GE    GPRG +G  
Sbjct: 1145 GEDGDKGEVGEPGQKGSKADKGEQGPPGPAGLQGPIGAPGPAGADGE---PGPRGQQGMF 1201

Query: 254  GING 257
            G  G
Sbjct: 1202 GQKG 1205



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 74/175 (42%), Gaps = 60/175 (34%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERG----------- 137
             ST +  PPGL+G  G++G  GA G  G+KG               ERG           
Sbjct: 1037 GSTGKDGPPGLRGFPGERGLPGATGPAGLKGGEGPQGPPGPVGSPGERGPAGAAGPIGLS 1096

Query: 138  -------------EKGAPGVVGPPGPQGIPGDEG---------------KRGPKGDMGYP 169
                         EKGAPG  GP GP G  G +G               + G KG++G P
Sbjct: 1097 GRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPQGPPGEDGDKGEVGEP 1156

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            G +G   D+G++GP      PG  GL G  G PG  G DG PG  G  G+ G+ G
Sbjct: 1157 GQKGSKADKGEQGP------PGPAGLQGPIGAPGPAGADGEPGPRGQQGMFGQKG 1205



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 64/123 (52%), Gaps = 18/123 (14%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----- 200
           GPPGP G+    G+ GP G  G  G +G  GD G +GP+G  G PG+ G  G+ G     
Sbjct: 551 GPPGPMGL---TGRSGPVGLPGSAGLKGESGDPGPQGPRGVQGPPGQSGKAGKRGRAGAD 607

Query: 201 ----LPGEPG------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
               +PGEPG       DG+PG  G  G  G+ G  G  G PG +G  GE G  GPRG  
Sbjct: 608 GGRGMPGEPGSKGDRGFDGLPGLPGEKGHRGELGPMGPPGAPGEDGQRGEDGEIGPRGLA 667

Query: 251 GKS 253
           G+S
Sbjct: 668 GES 670



 Score = 46.6 bits (109), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 69/130 (53%), Gaps = 12/130 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  G+ G +G  G  G+KGE G+   PG  GP G QG PG  GK G +G  G  G
Sbjct: 552 PPGPMGLTGRSGPVGLPGSAGLKGESGD---PGPQGPRGVQGPPGQSGKAGKRGRAGADG 608

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            +G+PG+ G +G +         G DG  GLPGE G  G  G  G  G PG+DG  G+DG
Sbjct: 609 GRGMPGEPGSKGDR---------GFDGLPGLPGEKGHRGELGPMGPPGAPGEDGQRGEDG 659

Query: 231 IPGTNGTNGE 240
             G  G  GE
Sbjct: 660 EIGPRGLAGE 669



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 67/139 (48%), Gaps = 24/139 (17%)

Query: 146 GPPGPQGIPGDEGKRGPKGDM-------GYPGPQG--IPGDEGK------------RGPK 184
           GPPG  G+PG +G  GP G M       G  G +G  +   E +            RGP 
Sbjct: 494 GPPGRAGLPGADGLAGPPGTMLMLPFRFGGDGEKGPVVSAQEAQAQAILSQARLAMRGPP 553

Query: 185 GDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G MG  GR   +GL G  GL GE G  G  G  G+ G PG+ G  GK G  G +G  G  
Sbjct: 554 GPMGLTGRSGPVGLPGSAGLKGESGDPGPQGPRGVQGPPGQSGKAGKRGRAGADGGRGMP 613

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G  G +G+RG  G+ G+PG
Sbjct: 614 GEPGSKGDRGFDGLPGLPG 632



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 67/163 (41%), Gaps = 45/163 (27%)

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK--------------- 184
            G  G  G PGPQG     GK GP G  G+PG +G+PG  G  G K               
Sbjct: 1025 GKEGAKGDPGPQGS---TGKDGPPGLRGFPGERGLPGATGPAGLKGGEGPQGPPGPVGSP 1081

Query: 185  ---GDMGYPGRIGLD------------GRDGLPGEPGLDGIPGRNGMDG----------- 218
               G  G  G IGL             G  G PGE G  G  GR+G+ G           
Sbjct: 1082 GERGPAGAAGPIGLSGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPQ 1141

Query: 219  -IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              PG+DG  G+ G PG  G+  +KG  GP G  G  G  G PG
Sbjct: 1142 GPPGEDGDKGEVGEPGQKGSKADKGEQGPPGPAGLQGPIGAPG 1184


>gi|312377591|gb|EFR24391.1| hypothetical protein AND_11046 [Anopheles darlingi]
          Length = 1923

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 94/187 (50%), Gaps = 34/187 (18%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP- 169
           P G +GP G KG  G  GE+G +G+ G KG  GV G PGP+G PG +G++G  G +G P 
Sbjct: 282 PRGYEGPPGPKGMDGFHGEVGERGQTGPKGGQGVPGRPGPEGFPGAKGEKGEPGSLGMPG 341

Query: 170 --GPQGIPGDEGKRGPKGDMGYPGR--IGLDGRDGLPGEPGLDGIPGRNGMDGI------ 219
             GP+G PG  G  GP+G+ G PG    G  G  G+PG PG  G  G  G  G+      
Sbjct: 342 TQGPRGYPGQPGPEGPRGEPGQPGFGIAGPKGNAGIPGFPGGKGQKGERGFKGVMGTPGD 401

Query: 220 -----PGKDGLPGKD---------GIPGTNGTNGEKGMTGPR---------GNRGKSGIN 256
                PG  G+ G+D         GIPGT G  G KG  G R         G++G+ G  
Sbjct: 402 AKEGRPGAPGVAGRDGEKGDAGRPGIPGTKGDRGAKGDIGGRCTDCRPGLKGDKGERGYA 461

Query: 257 GVPGTPA 263
           G PG P 
Sbjct: 462 GEPGRPG 468



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/186 (42%), Positives = 91/186 (48%), Gaps = 20/186 (10%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            +G        C PGL G  G KG IG +G   E G   E+G+KG PG  G  G  G+PG 
Sbjct: 903  KGLAGLPGPVCLPGLSGEKGDKGSIGLQGLPGEPGAASEKGQKGEPGSPGLRGNDGLPGL 962

Query: 157  EGKRGPKGDMGY-----PGPQGIPGD---------EGKRGPKGDMGYPGRIGLDGRDGLP 202
            EG  GPKGD G      PGPQG  GD          G  G KGDMG  G  G+ G  G  
Sbjct: 963  EGAPGPKGDQGASAYGRPGPQGEKGDIGISGMDGLPGANGLKGDMGVQGFPGIKGDKGTT 1022

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            G PG   IPG   MDG+PG +G  G  G  G  G  GE G  G RG+RG+ G  G+ G  
Sbjct: 1023 GHPG---IPGAPCMDGLPGAEGPIGPRGYDGEKGFKGEPGRIGDRGDRGEKGDQGLIGPV 1079

Query: 263  AICAYK 268
             +   K
Sbjct: 1080 GLMGLK 1085



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 6/154 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+GP G +G  G +G+ G+ G     GEKG  G+ GPPG  G  G +G+ GPKG  G+P
Sbjct: 742 GLRGPKGDRGSPGDRGDAGLPGSVGYPGEKGDQGLSGPPGYPGEVGPKGEPGPKGPAGHP 801

Query: 170 GPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  GIPG +G +G    +GD+G  G IGL G+ G  G+ G DG+ G  G  G+ G  G P
Sbjct: 802 GAPGIPGLDGVKGMPGLRGDVGEQGMIGLPGQKGDKGQAGNDGLKGFQGRKGMMGSTGYP 861

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  GT G +GEKG  G  G +G  G++G PG
Sbjct: 862 GARGPQGTKGESGEKGDRGDVGPKGLQGMSGPPG 895



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 20/166 (12%)

Query: 112 PGLQGPIGQKGEIG-----------AKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDE 157
           PG  G IGQKG  G            KG MG++G +G++G+PG     G PG  G PG++
Sbjct: 712 PGAPGLIGQKGGKGDPGLSMVGPPGPKGNMGLRGPKGDRGSPGDRGDAGLPGSVGYPGEK 771

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIP 211
           G +G  G  GYPG  G  G+ G +GP G  G PG  GLDG  G+P      GE G+ G+P
Sbjct: 772 GDQGLSGPPGYPGEVGPKGEPGPKGPAGHPGAPGIPGLDGVKGMPGLRGDVGEQGMIGLP 831

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G+ G  G  G DGL G  G  G  G+ G  G  GP+G +G+SG  G
Sbjct: 832 GQKGDKGQAGNDGLKGFQGRKGMMGSTGYPGARGPQGTKGESGEKG 877



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/143 (46%), Positives = 81/143 (56%), Gaps = 10/143 (6%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK---GDMGYP 169
            GL G  G KG++G +G  G+KG++G  G PG+ G P   G+PG EG  GP+   G+ G+ 
Sbjct: 996  GLPGANGLKGDMGVQGFPGIKGDKGTTGHPGIPGAPCMDGLPGAEGPIGPRGYDGEKGFK 1055

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGL----DGIPGRNGMDGIPGK 222
            G  G  GD G RG KGD G  G +   GL G  G+PGEPGL    D I G  G  G PG 
Sbjct: 1056 GEPGRIGDRGDRGEKGDQGLIGPVGLMGLKGDRGIPGEPGLPATVDAIKGDKGEPGFPGP 1115

Query: 223  DGLPGKDGIPGTNGTNGEKGMTG 245
             G PGK G+PG  G  G KG  G
Sbjct: 1116 IGRPGKVGLPGAPGEPGNKGEAG 1138



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 94/203 (46%), Gaps = 35/203 (17%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
                GF  +  +  PPG   P G+KG+ G  G +G KG++GE+G  G+ G  GPQG+   
Sbjct: 1238 AGKDGFPGAPGQRGPPG---PQGEKGDQGPPGFLGPKGDKGERGRDGLNGLNGPQGL--- 1291

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL--------- 207
                  KGD G PG +G+ G  G +G KG+ G  G  GLDG  G  G+ G          
Sbjct: 1292 ------KGDRGLPGVEGVAGLPGLQGEKGEQGLRGLSGLDGARGDKGQKGETPQLPPQRK 1345

Query: 208  --------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                           G+PG  G  GIPG  G PG+ G+ G  G  G +G+ G  G  G+ 
Sbjct: 1346 GPPGPPGYDGPKGDKGLPGLAGPSGIPGAPGAPGEVGLRGFEGARGLQGLRGDVGPEGRP 1405

Query: 254  GINGVPGTPAICAYKRESCSLLP 276
            G +G PG P I       C+  P
Sbjct: 1406 GRDGAPGLPGIKGEAGRDCAAAP 1428



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 96/189 (50%), Gaps = 32/189 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPP---GPQGIPGDEGK 159
            PGL+G +G++G IG  G+ G KG+         +G KG  G  G P   GPQG  G+ G+
Sbjct: 816  PGLRGDVGEQGMIGLPGQKGDKGQAGNDGLKGFQGRKGMMGSTGYPGARGPQGTKGESGE 875

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRI---GLDGRDGLPGEPGLDGIPG- 212
            +G +GD+G  G QG+ G  G  GPKGD    G PG +   GL G  G  G  GL G+PG 
Sbjct: 876  KGDRGDVGPKGLQGMSGPPGMLGPKGDKGLAGLPGPVCLPGLSGEKGDKGSIGLQGLPGE 935

Query: 213  -----RNGMDGIPGKDGLPGKDGIPGTNGTNGEK--------GMTGPRGNRGKSGINGVP 259
                   G  G PG  GL G DG+PG  G  G K        G  GP+G +G  GI+G+ 
Sbjct: 936  PGAASEKGQKGEPGSPGLRGNDGLPGLEGAPGPKGDQGASAYGRPGPQGEKGDIGISGMD 995

Query: 260  GTPAICAYK 268
            G P     K
Sbjct: 996  GLPGANGLK 1004



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 92/190 (48%), Gaps = 40/190 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG--KRGPKGDMGYP 169
           PG +G  G KGE G  G +G+ G +G +G PG  GP GP+G PG  G    GPKG+ G P
Sbjct: 319 PGPEGFPGAKGEKGEPGSLGMPGTQGPRGYPGQPGPEGPRGEPGQPGFGIAGPKGNAGIP 378

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRI--------GLDGRDGLPGEPGLDGIPGRNGMDGI-- 219
           G  G  G +G+RG KG MG PG          G+ GRDG  G+ G  GIPG  G  G   
Sbjct: 379 GFPGGKGQKGERGFKGVMGTPGDAKEGRPGAPGVAGRDGEKGDAGRPGIPGTKGDRGAKG 438

Query: 220 ----------------------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                                       PGK G PG+ G PG  G +G+ G+ G  G +G
Sbjct: 439 DIGGRCTDCRPGLKGDKGERGYAGEPGRPGKPGEPGERGFPGIPGEDGQVGLQGEWGQKG 498

Query: 252 KSGINGVPGT 261
           + GI+G PG 
Sbjct: 499 EPGIDGPPGV 508



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 103/214 (48%), Gaps = 50/214 (23%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------- 147
            A++G   +  E   PG+QG  G KG++G +G  G+ G  G  GAPG VGP         
Sbjct: 634 AAIRGPQGNPGEKGAPGIQGIRGDKGDMGEQGRTGMPGNAGPTGAPGPVGPRGLTGQRGE 693

Query: 148 ------------------PGPQGIPGDEGKR-----------GPKGDMGYPGPQ---GIP 175
                             PG  G+ G +G +           GPKG+MG  GP+   G P
Sbjct: 694 KGNSGPMGPPGAPGRDGLPGAPGLIGQKGGKGDPGLSMVGPPGPKGNMGLRGPKGDRGSP 753

Query: 176 GDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI- 231
           GD G  G  G +GYPG     GL G  G PGE G  G PG  G  G PG  G+PG DG+ 
Sbjct: 754 GDRGDAGLPGSVGYPGEKGDQGLSGPPGYPGEVGPKGEPGPKGPAGHPGAPGIPGLDGVK 813

Query: 232 --PGTNGTNGEKGMT---GPRGNRGKSGINGVPG 260
             PG  G  GE+GM    G +G++G++G +G+ G
Sbjct: 814 GMPGLRGDVGEQGMIGLPGQKGDKGQAGNDGLKG 847



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 92/180 (51%), Gaps = 15/180 (8%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            M GF     E    G +G  G  G  G +G  G KGE+GE G+ G+ G  GP+G PG  
Sbjct: 293 GMDGFHGEVGERGQTGPKGGQGVPGRPGPEGFPGAKGEKGEPGSLGMPGTQGPRGYPGQP 352

Query: 158 GKRGPKGDMGYP-----GPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
           G  GP+G+ G P     GP+   GIPG  G +G KG+ G+ G +G  G D   G PG  G
Sbjct: 353 GPEGPRGEPGQPGFGIAGPKGNAGIPGFPGGKGQKGERGFKGVMGTPG-DAKEGRPGAPG 411

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------GMTGPRGNRGKSGINGVPGTPA 263
           + GR+G  G  G+ G+PG  G  G  G  G +      G+ G +G RG +G  G PG P 
Sbjct: 412 VAGRDGEKGDAGRPGIPGTKGDRGAKGDIGGRCTDCRPGLKGDKGERGYAGEPGRPGKPG 471



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 89/167 (53%), Gaps = 17/167 (10%)

Query: 111  PPGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            PPG+ GP G KG  G  G +   G+ GE+G+KG+ G+ G PG  G   ++G++G  G  G
Sbjct: 893  PPGMLGPKGDKGLAGLPGPVCLPGLSGEKGDKGSIGLQGLPGEPGAASEKGQKGEPGSPG 952

Query: 168  YPGPQGIPGDEGKRGPKGDMGYP--GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
              G  G+PG EG  GPKGD G    GR G  G  G  G  G+DG+PG NG+ G  G  G 
Sbjct: 953  LRGNDGLPGLEGAPGPKGDQGASAYGRPGPQGEKGDIGISGMDGLPGANGLKGDMGVQGF 1012

Query: 226  P---------GKDGIPGT---NGTNGEKGMTGPRGNRGKSGINGVPG 260
            P         G  GIPG    +G  G +G  GPRG  G+ G  G PG
Sbjct: 1013 PGIKGDKGTTGHPGIPGAPCMDGLPGAEGPIGPRGYDGEKGFKGEPG 1059



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 106/239 (44%), Gaps = 38/239 (15%)

Query: 61  VPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQ 120
           +PP+L   IR     Q N                  +  QG         P G  GP+G 
Sbjct: 628 IPPNLEAAIR---GPQGNPGEKGAPGIQGIRGDKGDMGEQGRTGMPGNAGPTGAPGPVGP 684

Query: 121 KGEIGAKGEMG---------------------VKGERGEKGAPGV--VGPPGPQG----- 152
           +G  G +GE G                     + G++G KG PG+  VGPPGP+G     
Sbjct: 685 RGLTGQRGEKGNSGPMGPPGAPGRDGLPGAPGLIGQKGGKGDPGLSMVGPPGPKGNMGLR 744

Query: 153 -IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLD 208
              GD G  G +GD G PG  G PG++G +G  G  GYPG +G  G     G  G PG  
Sbjct: 745 GPKGDRGSPGDRGDAGLPGSVGYPGEKGDQGLSGPPGYPGEVGPKGEPGPKGPAGHPGAP 804

Query: 209 GIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           GIPG +G+ G+PG  G  G+    G+PG  G  G+ G  G +G +G+ G+ G  G P  
Sbjct: 805 GIPGLDGVKGMPGLRGDVGEQGMIGLPGQKGDKGQAGNDGLKGFQGRKGMMGSTGYPGA 863



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 104/233 (44%), Gaps = 51/233 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQ--------KGEIGAKGEMGVK-----------GERGE 138
             +GF  +  E  P G+ G  G+        KG  G KG MGV+           G +GE
Sbjct: 111 GQRGFSGTPGEKGPAGIDGQKGERGDKGECIKGAKGEKGAMGVEVYEFRPIDETTGPQGE 170

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------------PKGD 186
           KG PG  G PG  G  G  G RG  GD G+ G +G+PG  G RG             KGD
Sbjct: 171 KGEPGAPGVPGRAGEKGQAGDRGQIGDRGHKGEKGLPGQPGPRGRDGNFGPIGLPGQKGD 230

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGM-------------------DGIPGKDGLPG 227
            G  G  GL G  G  G+PG DGIPG+ G+                    G  G +G PG
Sbjct: 231 RGSEGLHGLKGNVGPKGDPGRDGIPGQPGIAGPPGAPGGGEGRPGAPGPKGPRGYEGPPG 290

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL-LPNSE 279
             G+ G +G  GE+G TGP+G +G  G  G  G P     K E  SL +P ++
Sbjct: 291 PKGMDGFHGEVGERGQTGPKGGQGVPGRPGPEGFPGAKGEKGEPGSLGMPGTQ 343



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 102/242 (42%), Gaps = 60/242 (24%)

Query: 86  VWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV 145
           + +  Y   P+    G      E   PG+ G  G+KG+ G +G++G +G +GEKG PG  
Sbjct: 151 MGVEVYEFRPIDETTGPQGEKGEPGAPGVPGRAGEKGQAGDRGQIGDRGHKGEKGLPGQP 210

Query: 146 GPPG------PQGIPGDEGKRG------------PKGDMGYPGPQGIPGD---------- 177
           GP G      P G+PG +G RG            PKGD   PG  GIPG           
Sbjct: 211 GPRGRDGNFGPIGLPGQKGDRGSEGLHGLKGNVGPKGD---PGRDGIPGQPGIAGPPGAP 267

Query: 178 ------------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                             EG  GPKG  G+ G +G  G+ G  G  G+ G PG  G  G 
Sbjct: 268 GGGEGRPGAPGPKGPRGYEGPPGPKGMDGFHGEVGERGQTGPKGGQGVPGRPGPEGFPGA 327

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI-----------NGVPGTPAICAYK 268
            G+ G PG  G+PGT G  G  G  GP G RG+ G             G+PG P     K
Sbjct: 328 KGEKGEPGSLGMPGTQGPRGYPGQPGPEGPRGEPGQPGFGIAGPKGNAGIPGFPGGKGQK 387

Query: 269 RE 270
            E
Sbjct: 388 GE 389



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 89/170 (52%), Gaps = 12/170 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G  GE+G KGE G KG  G  GAPG+ G  G +G+PG  G  G +G +G PG +
Sbjct: 775 GLSGPPGYPGEVGPKGEPGPKGPAGHPGAPGIPGLDGVKGMPGLRGDVGEQGMIGLPGQK 834

Query: 173 G---------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G         + G +G++G  G  GYPG  G  G  G  GE G  G  G  G+ G+ G  
Sbjct: 835 GDKGQAGNDGLKGFQGRKGMMGSTGYPGARGPQGTKGESGEKGDRGDVGPKGLQGMSGPP 894

Query: 224 GLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G+ G  G  G  G  G     G++G +G++G  G+ G+PG P   + K +
Sbjct: 895 GMLGPKGDKGLAGLPGPVCLPGLSGEKGDKGSIGLQGLPGEPGAASEKGQ 944



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 93/190 (48%), Gaps = 43/190 (22%)

Query: 110 CPPGLQGPIGQKGEIGAKGE------------------------MGVKGERGEKGAPGVV 145
           C PGL+G    KGE G  GE                        +G++GE G+KG PG+ 
Sbjct: 447 CRPGLKG---DKGERGYAGEPGRPGKPGEPGERGFPGIPGEDGQVGLQGEWGQKGEPGID 503

Query: 146 GPPGPQGIPGDE---------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GPPG  G PG +           +G KG  G PG QG+ G++G  G  G  G  G  GL 
Sbjct: 504 GPPGVAGEPGADYIVTENQVKVIKGDKGQPGLPGIQGVKGEKGYMGLTGPEGKMGPRGLK 563

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G PGEPG DG PG +G DG+PG+ G      I G  G  G  G +G +G++G +G+ 
Sbjct: 564 GDKGRPGEPGFDGAPGASGKDGLPGRHGQT----IKGEPGLKGNVGYSGQKGDKGYTGLK 619

Query: 257 GVPGTPAICA 266
           G PG    CA
Sbjct: 620 GEPGK---CA 626



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 90/177 (50%), Gaps = 11/177 (6%)

Query: 98  AMQGFCNSTKEYCP--PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------APGVVG 146
            + G     KE  P  PG+ G  G+KG+ G  G  G KG+RG KG          PG+ G
Sbjct: 394 GVMGTPGDAKEGRPGAPGVAGRDGEKGDAGRPGIPGTKGDRGAKGDIGGRCTDCRPGLKG 453

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             G +G  G+ G+ G  G+ G  G  GIPG++G+ G +G+ G  G  G+DG  G+ GEPG
Sbjct: 454 DKGERGYAGEPGRPGKPGEPGERGFPGIPGEDGQVGLQGEWGQKGEPGIDGPPGVAGEPG 513

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            D I   N +  I G  G PG  GI G  G  G  G+TGP G  G  G+ G  G P 
Sbjct: 514 ADYIVTENQVKVIKGDKGQPGLPGIQGVKGEKGYMGLTGPEGKMGPRGLKGDKGRPG 570



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 91/165 (55%), Gaps = 8/165 (4%)

Query: 114  LQGPIGQKGEIGAKGEMG-----VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            + G +GQKG+IG +GE G     VKGE+G  G PG  G  GP G+ G++G +G  G  G 
Sbjct: 1151 MNGLVGQKGDIGLQGEKGDTCPAVKGEKGLPGRPGKTGRDGPPGLVGEKGDKGLAGLPGP 1210

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
             GP G PG  G++G KGD G  G +G  G+DG PG PG  G PG  G  G  G  G  G 
Sbjct: 1211 TGPPGPPGPLGRQGEKGDRGDTGLVGRAGKDGFPGAPGQRGPPGPQGEKGDQGPPGFLGP 1270

Query: 229  DGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGTPAICAYKRE 270
             G  G  G +G  G+ GP   +G+RG  G+ GV G P +   K E
Sbjct: 1271 KGDKGERGRDGLNGLNGPQGLKGDRGLPGVEGVAGLPGLQGEKGE 1315



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 82/177 (46%), Gaps = 46/177 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PGL+GP G +G  G  G+ G  G  GEKG         P GI G +G+R           
Sbjct: 95  PGLEGPQGHRGPAGEPGQRGFSGTPGEKG---------PAGIDGQKGERGDKGECIKGAK 145

Query: 161 --------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                               GP+G+ G PG  G+PG  G++G  GD G  G  G  G  G
Sbjct: 146 GEKGAMGVEVYEFRPIDETTGPQGEKGEPGAPGVPGRAGEKGQAGDRGQIGDRGHKGEKG 205

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           LPG+PG        G DG  G  GLPG+ G  G+ G +G KG  GP+G+ G+ GI G
Sbjct: 206 LPGQPGP------RGRDGNFGPIGLPGQKGDRGSEGLHGLKGNVGPKGDPGRDGIPG 256



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 88/209 (42%), Gaps = 56/209 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---------------RGEKGAPGVVGPPGPQGIPGD 156
           PGL+G +G  G+ G KG  G+KGE               RG +G PG  G PG QGI GD
Sbjct: 598 PGLKGNVGYSGQKGDKGYTGLKGEPGKCADIPPNLEAAIRGPQGNPGEKGAPGIQGIRGD 657

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG---------LDGRDGLPGEPGL 207
           +G  G +G  G PG  G  G  G  GP+G  G  G  G           GRDGLPG PGL
Sbjct: 658 KGDMGEQGRTGMPGNAGPTGAPGPVGPRGLTGQRGEKGNSGPMGPPGAPGRDGLPGAPGL 717

Query: 208 --------------------------------DGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                                            G PG  G  G+PG  G PG+ G  G +
Sbjct: 718 IGQKGGKGDPGLSMVGPPGPKGNMGLRGPKGDRGSPGDRGDAGLPGSVGYPGEKGDQGLS 777

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G  G  GP+G  G  G  G PG P I
Sbjct: 778 GPPGYPGEVGPKGEPGPKGPAGHPGAPGI 806



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 9/119 (7%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
            +GE+G++G  G+VG  G  G PG  G+RGP      PGPQG  GD+G     GPKGD G 
Sbjct: 1223 QGEKGDRGDTGLVGRAGKDGFPGAPGQRGP------PGPQGEKGDQGPPGFLGPKGDKGE 1276

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             GR GL+G +G  G  G  G+PG  G+ G+PG  G  G+ G+ G +G +G +G  G +G
Sbjct: 1277 RGRDGLNGLNGPQGLKGDRGLPGVEGVAGLPGLQGEKGEQGLRGLSGLDGARGDKGQKG 1335



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 91/198 (45%), Gaps = 53/198 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------------GIP 154
           G  G  G+ G++G +GE G KGE G  G PGV G PG                    G+P
Sbjct: 477 GFPGIPGEDGQVGLQGEWGQKGEPGIDGPPGVAGEPGADYIVTENQVKVIKGDKGQPGLP 536

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG------RDGLP------ 202
           G +G +G KG MG  GP+G     G RG KGD G PG  G DG      +DGLP      
Sbjct: 537 GIQGVKGEKGYMGLTGPEG---KMGPRGLKGDKGRPGEPGFDGAPGASGKDGLPGRHGQT 593

Query: 203 --GEPGLDGIPGRNGMDGIPGKDGL---PGK---------------DGIPGTNGTNGEKG 242
             GEPGL G  G +G  G  G  GL   PGK                G PG  G  G +G
Sbjct: 594 IKGEPGLKGNVGYSGQKGDKGYTGLKGEPGKCADIPPNLEAAIRGPQGNPGEKGAPGIQG 653

Query: 243 MTGPRGNRGKSGINGVPG 260
           + G +G+ G+ G  G+PG
Sbjct: 654 IRGDKGDMGEQGRTGMPG 671



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 100/213 (46%), Gaps = 62/213 (29%)

Query: 112  PGLQGPIGQKG---EIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEGK------ 159
            PG +GPIG +G   E G KGE   +G +G+RGEKG  G++GP G  G+ GD G       
Sbjct: 1037 PGAEGPIGPRGYDGEKGFKGEPGRIGDRGDRGEKGDQGLIGPVGLMGLKGDRGIPGEPGL 1096

Query: 160  -------RGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYP------------GRIG 194
                   +G KG+ G+PGP       G+PG  G+ G KG+ G              G +G
Sbjct: 1097 PATVDAIKGDKGEPGFPGPIGRPGKVGLPGAPGEPGNKGEAGLQGLPGFPGPPGMNGLVG 1156

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---------- 244
              G  GL GE G D  P   G  G+PG+ G  G+DG PG  G  G+KG+           
Sbjct: 1157 QKGDIGLQGEKG-DTCPAVKGEKGLPGRPGKTGRDGPPGLVGEKGDKGLAGLPGPTGPPG 1215

Query: 245  --------GPRGNRGKSGI------NGVPGTPA 263
                    G +G+RG +G+      +G PG P 
Sbjct: 1216 PPGPLGRQGEKGDRGDTGLVGRAGKDGFPGAPG 1248



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 91/197 (46%), Gaps = 50/197 (25%)

Query: 113 GLQGPIGQ--KGEIGAKGEMGVKGERGEKGAPGVVGPPG-----PQGIPGDEGKRGPKGD 165
           GL G  GQ  KGE G KG +G  G++G+KG  G+ G PG     P  +  +   RGP+G+
Sbjct: 585 GLPGRHGQTIKGEPGLKGNVGYSGQKGDKGYTGLKGEPGKCADIPPNL--EAAIRGPQGN 642

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
              PG +G PG +G RG KGDMG        GR G+PG  G  G PG  G  G+ G+ G 
Sbjct: 643 ---PGEKGAPGIQGIRGDKGDMGE------QGRTGMPGNAGPTGAPGPVGPRGLTGQRGE 693

Query: 226 PG------------KDGIPGTNGTNGEK--------------------GMTGPRGNRGKS 253
            G            +DG+PG  G  G+K                    G+ GP+G+RG  
Sbjct: 694 KGNSGPMGPPGAPGRDGLPGAPGLIGQKGGKGDPGLSMVGPPGPKGNMGLRGPKGDRGSP 753

Query: 254 GINGVPGTPAICAYKRE 270
           G  G  G P    Y  E
Sbjct: 754 GDRGDAGLPGSVGYPGE 770



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 84/176 (47%), Gaps = 23/176 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-----------PGPQGIPGDEGKRG 161
           GL GP G+ G  G KG+ G  GE G  GAPG  G             G  G+ G+ G  G
Sbjct: 549 GLTGPEGKMGPRGLKGDKGRPGEPGFDGAPGASGKDGLPGRHGQTIKGEPGLKGNVGYSG 608

Query: 162 PKGDMGYPGPQGIPG---------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            KGD GY G +G PG         +   RGP+G+   PG  G  G  G+ G+ G  G  G
Sbjct: 609 QKGDKGYTGLKGEPGKCADIPPNLEAAIRGPQGN---PGEKGAPGIQGIRGDKGDMGEQG 665

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           R GM G  G  G PG  G  G  G  GEKG +GP G  G  G +G+PG P +   K
Sbjct: 666 RTGMPGNAGPTGAPGPVGPRGLTGQRGEKGNSGPMGPPGAPGRDGLPGAPGLIGQK 721



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 94/229 (41%), Gaps = 80/229 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG------------------------------------- 134
           PG +G  G+KG  G  G +G++G                                     
Sbjct: 13  PGAEGLPGEKGTKGEAGPLGLQGPKGDRGRDGSARLPWHPRNERCPRCSRCPRIVGTGRL 72

Query: 135 ---------------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
                           +G+KG PG+ GP G +G  G+ G+RG  G  G  GP GI G +G
Sbjct: 73  QRGDKGEPARQPENYNKGQKGEPGLEGPQGHRGPAGEPGQRGFSGTPGEKGPAGIDGQKG 132

Query: 180 KRGPKGDM-----GYPGRIGLD-----------GRDGLPGEPGLDGIPGRNGMDGIP--- 220
           +RG KG+      G  G +G++           G  G  GEPG  G+PGR G  G     
Sbjct: 133 ERGDKGECIKGAKGEKGAMGVEVYEFRPIDETTGPQGEKGEPGAPGVPGRAGEKGQAGDR 192

Query: 221 ---------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                    G+ GLPG+ G  G +G  G  G+ G +G+RG  G++G+ G
Sbjct: 193 GQIGDRGHKGEKGLPGQPGPRGRDGNFGPIGLPGQKGDRGSEGLHGLKG 241



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 78/181 (43%), Gaps = 50/181 (27%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGYPGPQGIP----------- 175
           MG+KG +G +G PG  G PG +G  G+ G    +GPKGD G  G   +P           
Sbjct: 1   MGLKGVKGVRGFPGAEGLPGEKGTKGEAGPLGLQGPKGDRGRDGSARLPWHPRNERCPRC 60

Query: 176 --------------GDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                         GD+G+         +G KG+ G  G  G  G  G PG+ G  G PG
Sbjct: 61  SRCPRIVGTGRLQRGDKGEPARQPENYNKGQKGEPGLEGPQGHRGPAGEPGQRGFSGTPG 120

Query: 213 RNGMDGIPGKDGLPGKDG--IPGTNGTNGEKGM-----------TGPRGNRGKSGINGVP 259
             G  GI G+ G  G  G  I G  G  G  G+           TGP+G +G+ G  GVP
Sbjct: 121 EKGPAGIDGQKGERGDKGECIKGAKGEKGAMGVEVYEFRPIDETTGPQGEKGEPGAPGVP 180

Query: 260 G 260
           G
Sbjct: 181 G 181


>gi|440911158|gb|ELR60869.1| Collagen alpha-2(V) chain [Bos grunniens mutus]
          Length = 1498

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGVQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 90/182 (49%), Gaps = 9/182 (4%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKG 164
           PPG++G  G  G  G KGE G KGE G  G  G +GPPG      P+G PG  G  GP G
Sbjct: 460 PPGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPVG 519

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           + G PG +G PG +G  GPKG  G  G +G  G  G  G+PG  G PG  G  G+ G  G
Sbjct: 520 ERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPG 579

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLL 284
           + G +G  G  G  GE G  GP G+    GI G PG+  +   K  S       E     
Sbjct: 580 VQGPEGKLGPLGAPGEDGRPGPPGS---IGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAG 636

Query: 285 IP 286
           +P
Sbjct: 637 VP 638



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 89/207 (42%), Gaps = 54/207 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQG---------PIGQKGEIGAKGEMGVKGERGEKGAPGV---- 144
            M+G    T    P G QG         P+G +G  GA G  G  G +G  G+PG     
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGPTGSPGTSGPP 443

Query: 145 --------------VGPPGPQGIPGDEGKRGPKGDMG---YPGPQGI------PGDEGKR 181
                          GPPG +G PGD G  G KG+ G    PGP G+      PG+EGKR
Sbjct: 444 GLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKR 503

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP+GD                  PG  G PG  G  G PG  G PG DG+PG  G  GE+
Sbjct: 504 GPRGD------------------PGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGER 545

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G +G  G  G PG P +   +
Sbjct: 546 GPVGSSGPKGGQGDPGRPGEPGLPGAR 572



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 77/169 (45%), Gaps = 21/169 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G  GE G  G  G  G+RG  G PG  GP GP GIPG  G  G  G  G  GP 
Sbjct: 333 GPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGPT 392

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG----------- 221
           G  G EG +G +G+ G PG +   G  GLPG  G DG PG  G  G PG           
Sbjct: 393 GARGPEGPQGQRGETGPPGPV---GSQGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPP 449

Query: 222 -------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                    G PG  G PG  G  G KG  GP+G  G  G+ G  G P 
Sbjct: 450 GSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPG 498



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 78/145 (53%), Gaps = 6/145 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G  G +G  G  
Sbjct: 267 GEPGRNGKPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPT 326

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G +G  GP+G RG++G  G
Sbjct: 387 GEAGPTGARGPEGPQGQRGETGPPG 411



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 70/145 (48%), Gaps = 27/145 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------------------ERGEKGAPGVVGPPGPQ 151
           G  GP G +G IG KG  G  G                     E+GE G  G+VGPPG +
Sbjct: 771 GTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPSGPTGEKGEPGPRGLVGPPGSR 830

Query: 152 GIPGDEGKRGPKGDMGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G PG  G+ GP G +G+ GPQ      G+ G+ G+ G KGD G PG  GL G  G  G  
Sbjct: 831 GNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPN 890

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDG 230
           G+ G+ G  G  G PG  G PG  G
Sbjct: 891 GVPGLKGGRGTQGPPGATGFPGSAG 915



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 86/160 (53%), Gaps = 18/160 (11%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------GIPGDEGKRG 161
           LQG  G++G  G  G  G +G  GEKGA G  G  G +            G  G++G+ G
Sbjct: 760 LQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPSGPTGEKGEPG 819

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           P+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG    PG+ G  G PG
Sbjct: 820 PRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE---PGQKGDAGSPG 876

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 877 PQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 86/198 (43%), Gaps = 33/198 (16%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGP--- 147
           V   G         P G  GP+G +G  G +G +G +G  G++GA      PG +GP   
Sbjct: 314 VGATGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGI 373

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G +G  G  G  GP+G  G  G+ GP G +G  G  G  G DG PG  G 
Sbjct: 374 PGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGP 433

Query: 208 DGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR----- 247
            G PG                 G  G PG  G PG  G+PG  G  G KG  GP      
Sbjct: 434 TGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGP 493

Query: 248 ----GNRGKSGINGVPGT 261
               G  GK G  G PGT
Sbjct: 494 IGPPGEEGKRGPRGDPGT 511



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 79/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------------KGD 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP                   G 
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGAPGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+ G  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLLGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           PG+PG  G  G  G  G PG+ G PG  G+P      GEKGM G
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLP------GEKGMAG 735



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 69/150 (46%), Gaps = 2/150 (1%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G  G  G  G+PG  G+PG +G RG KG  G  G +G  G  G  G  G 
Sbjct: 269 PGRNGKPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGP 328

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G  G  G  G+PG+ G  G  G PG  G +G  G  GP G  G  G  G PG P +   
Sbjct: 329 MGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMKGE 388

Query: 268 KRESCSLLPNSETSQL--LIPPTIVGSEHI 295
              + +  P     Q     PP  VGS+ +
Sbjct: 389 AGPTGARGPEGPQGQRGETGPPGPVGSQGL 418



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 80/200 (40%), Gaps = 48/200 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGVGPAGPPGEPGDPGPMGPVGARGPEGPPGKPGEDGEPGR 271

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G  G +G+ GP G MG 
Sbjct: 272 NGKPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGA 331

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 332 MGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGP 391

Query: 244 TGPRGNRGKSGINGVPGTPA 263
           TG RG  G  G  G  G P 
Sbjct: 392 TGARGPEGPQGQRGETGPPG 411



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 89/233 (38%), Gaps = 84/233 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP    G+PG +G R   GP G  
Sbjct: 849  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 908

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 909  GFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 968

Query: 194  ---------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
                                 G  G  G+PG+ G  G+PG  G  G PGK G        
Sbjct: 969  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGAPGDK 1028

Query: 226  -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                             PG +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 1029 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1081



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 49/90 (54%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+ G +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLLGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 46.6 bits (109), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 86/205 (41%), Gaps = 66/205 (32%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 601 PPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 660

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PGD G     GP+G+ G PG   
Sbjct: 661 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGER- 719

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDG---------------------IPGKDGLPGKDGIPG 233
                   GEPG+ G+PG  GM G                      PG  G+PG+ GI G
Sbjct: 720 --------GEPGITGLPGEKGMAGGHGPDGPKGSPGPPGTPGDTGPPGLQGMPGERGIAG 771

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGV 258
           T G  G++G  G +G  G +G +G 
Sbjct: 772 TPGPKGDRGGIGEKGAEGTAGNDGA 796



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 80/197 (40%), Gaps = 63/197 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 886  PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 946  DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1005

Query: 228  KDGIPGTNGTNGEKGMT 244
              G+PG  GT G+ G T
Sbjct: 1006 MPGLPGPAGTPGKVGPT 1022


>gi|340730046|ref|XP_003403300.1| PREDICTED: collagen alpha-2(IV) chain-like isoform 2 [Bombus
           terrestris]
          Length = 892

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 96/194 (49%), Gaps = 48/194 (24%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDMGYPGPQG 173
           QKG  G +GE G +G++G+KG PG  G PG  G PG EG+ G      PKG++G+P   G
Sbjct: 396 QKGSKGEQGERGDEGKQGQKGEPGERGFPGQDGSPGSEGRSGLPGFPGPKGEIGFP---G 452

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------------------NG 215
           +PG +G +G +G+ G  G  G+ G+ G  GEPG DG+PG                    G
Sbjct: 453 VPGPQGLQGLRGEAGALGPPGIQGQKGEAGEPGRDGLPGSMVGSILPGPPGPEGPRGSPG 512

Query: 216 MDGIP------------------GKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSG 254
            DG+P                  GKDG PG  G PG+ G+    GE G+ GPRG  G  G
Sbjct: 513 EDGLPGVKGEPGPVGPPGLPGLQGKDGAPGSLGPPGSQGSPGLPGEPGVPGPRGIEGAIG 572

Query: 255 INGVPGTPAICAYK 268
             G+PG     A K
Sbjct: 573 KPGLPGLDGRSAEK 586



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 94/219 (42%), Gaps = 40/219 (18%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
           +QG   +     PPG QG  G  GE G  G  G++G  G+ G PG+ G    +G  G +G
Sbjct: 534 LQGKDGAPGSLGPPGSQGSPGLPGEPGVPGPRGIEGAIGKPGLPGLDGRSAEKGDRGHQG 593

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKG------------------------DM------- 187
           ++GP G  G PG  G PG  G  G  G                        DM       
Sbjct: 594 EQGPVGPRGLPGSVGAPGLPGVAGIPGLEGRPGPPGAPGPPGPAGPPGTISDMLNTNNIL 653

Query: 188 ---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
              G PG  G  G  G PG PG  G PG  G +G  G  G+PGKDG PG  G  G +G T
Sbjct: 654 ETIGSPGVSGPRGASGAPGLPGERGPPGERGPEGQMGLPGIPGKDGAPGLQGPPGIRGQT 713

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
                 G  G+ G PG   I +  RE C+ +   + +++
Sbjct: 714 ------GMPGVQGPPGRSIIESEIREICTSVLREQMTEM 746



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 101/222 (45%), Gaps = 62/222 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL+G  G++G++G +G     G RG  G PG  G  GP G+PG +G+ G +GDMG+PG 
Sbjct: 296 PGLRGSPGEQGKVGPQG---FTGARGFPGNPGPKGSIGPIGLPGAKGENGERGDMGFPGL 352

Query: 172 QG--------------------------IP---------------GDEGKRGPKGDMGYP 190
           +G                          IP               G +G++G +GD    
Sbjct: 353 KGDQGLPGPQGYPGPPGPPGKISDYRDAIPKFVGPPGSPGYPGQKGSKGEQGERGD---- 408

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                +G+ G  GEPG  G PG+   DG PG +G  G  G PG  G  G  G+ GP+G +
Sbjct: 409 -----EGKQGQKGEPGERGFPGQ---DGSPGSEGRSGLPGFPGPKGEIGFPGVPGPQGLQ 460

Query: 251 GKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGS 292
           G  G  G  G P I   K E+       E  +  +P ++VGS
Sbjct: 461 GLRGEAGALGPPGIQGQKGEA------GEPGRDGLPGSMVGS 496



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 103/259 (39%), Gaps = 95/259 (36%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------ 144
           V  QGF  +      PG +G IG  G  GAKGE    GERG+ G PG+            
Sbjct: 308 VGPQGFTGARGFPGNPGPKGSIGPIGLPGAKGEN---GERGDMGFPGLKGDQGLPGPQGY 364

Query: 145 --------------------------------VGPPGPQGIPGDEGKRGPK---GDMGYP 169
                                            G  G QG  GDEGK+G K   G+ G+P
Sbjct: 365 PGPPGPPGKISDYRDAIPKFVGPPGSPGYPGQKGSKGEQGERGDEGKQGQKGEPGERGFP 424

Query: 170 GPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIP 220
           G  G PG EG+       GPKG++G+PG  G  G  GL GE G     GI G+ G  G P
Sbjct: 425 GQDGSPGSEGRSGLPGFPGPKGEIGFPGVPGPQGLQGLRGEAGALGPPGIQGQKGEAGEP 484

Query: 221 GKDGLPG---------------------KDGIPGT---------------NGTNGEKGMT 244
           G+DGLPG                     +DG+PG                 G +G  G  
Sbjct: 485 GRDGLPGSMVGSILPGPPGPEGPRGSPGEDGLPGVKGEPGPVGPPGLPGLQGKDGAPGSL 544

Query: 245 GPRGNRGKSGINGVPGTPA 263
           GP G++G  G+ G PG P 
Sbjct: 545 GPPGSQGSPGLPGEPGVPG 563



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 91/245 (37%), Gaps = 79/245 (32%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGP---- 150
            + GF     E   PG+ GP G    +GE GA G  G++G++GE G PG  G PG     
Sbjct: 437 GLPGFPGPKGEIGFPGVPGPQGLQGLRGEAGALGPPGIQGQKGEAGEPGRDGLPGSMVGS 496

Query: 151 --------------------------------------QGIPGDEGKRGPKGDMGYPGPQ 172
                                                 QG  G  G  GP G  G PG  
Sbjct: 497 ILPGPPGPEGPRGSPGEDGLPGVKGEPGPVGPPGLPGLQGKDGAPGSLGPPGSQGSPGLP 556

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLPGKD 229
           G PG  G RG +G +G PG  GLDGR    G+ G  G  G  G  G+PG     GLPG  
Sbjct: 557 GEPGVPGPRGIEGAIGKPGLPGLDGRSAEKGDRGHQGEQGPVGPRGLPGSVGAPGLPGVA 616

Query: 230 GIPGTNG-------------------------------TNGEKGMTGPRGNRGKSGINGV 258
           GIPG  G                               T G  G++GPRG  G  G+ G 
Sbjct: 617 GIPGLEGRPGPPGAPGPPGPAGPPGTISDMLNTNNILETIGSPGVSGPRGASGAPGLPGE 676

Query: 259 PGTPA 263
            G P 
Sbjct: 677 RGPPG 681



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 65/164 (39%), Gaps = 49/164 (29%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GV G RG  GAPG+   PG +G PG+ G  G  G  G PG  G PG +G  G +G  
Sbjct: 657 GSPGVSGPRGASGAPGL---PGERGPPGERGPEGQMGLPGIPGKDGAPGLQGPPGIRGQT 713

Query: 188 GYPGRIGLDGRDGL---------------------------------------------- 201
           G PG  G  GR  +                                              
Sbjct: 714 GMPGVQGPPGRSIIESEIREICTSVLREQMTEMAAQMQGPPGPPGRGRPGRPGSPGPQGR 773

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           PG+PGL G+PG  G  G+PG  G  G  G PG  G  G+KG  G
Sbjct: 774 PGDPGLPGLPGERGFVGLPGPQGAIGPQGSPGERGEKGDKGQEG 817



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 86/242 (35%), Gaps = 95/242 (39%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------ 159
           PGL G   +KG+ G +GE G  G RG  G+ G  G PG  GIPG EG+            
Sbjct: 577 PGLDGRSAEKGDRGHQGEQGPVGPRGLPGSVGAPGLPGVAGIPGLEGRPGPPGAPGPPGP 636

Query: 160 -------------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
                                     GP+G  G PG  G  G  G+RGP+G MG PG  G
Sbjct: 637 AGPPGTISDMLNTNNILETIGSPGVSGPRGASGAPGLPGERGPPGERGPEGQMGLPGIPG 696

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGK-------------------------------- 222
            DG  GL G PG+ G  G  G+ G PG+                                
Sbjct: 697 KDGAPGLQGPPGIRGQTGMPGVQGPPGRSIIESEIREICTSVLREQMTEMAAQMQGPPGP 756

Query: 223 --------------------DGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                                GLPG        G+PG  G  G +G  G RG +G  G  
Sbjct: 757 PGRGRPGRPGSPGPQGRPGDPGLPGLPGERGFVGLPGPQGAIGPQGSPGERGEKGDKGQE 816

Query: 257 GV 258
           GV
Sbjct: 817 GV 818


>gi|281351912|gb|EFB27496.1| hypothetical protein PANDA_007211 [Ailuropoda melanoleuca]
          Length = 1499

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPAGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+ G       +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 90/170 (52%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G  G+EGKRGP+GD G  GP   P
Sbjct: 459 GPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPAGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 97/221 (43%), Gaps = 32/221 (14%)

Query: 77  QNSTHNNPW-------VWLNAYSRIPL-VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG 128
           Q  TH  P        + +   S  P    M+G    T    P   +GP GQ+GE G  G
Sbjct: 355 QRGTHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGP---EGPQGQRGETGPPG 411

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPKGDMGYPGPQG 173
            +G +G  G  G  G  G  GP G PG  G                 GP G  G PG  G
Sbjct: 412 PVGSQGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPG 471

Query: 174 IPGDEGKRGPKGD------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           +PG +G+ GPKG+       G  G  G +G+ G  G+PG  G PG  G  G PG  G PG
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPAGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPG 531

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            DG+PG  G  GE+G  G  G +G  G  G PG P +   +
Sbjct: 532 SDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGAR 572



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 89/179 (49%), Gaps = 30/179 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---K 222
            G  G+PG  G  GP    G  G+PG  G+ G  G  G  G +G  G+ G  G PG    
Sbjct: 356 RGTHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGS 415

Query: 223 DGLPGK---DGIPGTNGTNGEKGM------------------TGPRGNRGKSGINGVPG 260
            GLPG    DG PG  G  G  G                   TGP G RG+ G  GVPG
Sbjct: 416 QGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPG 474



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 76/145 (52%), Gaps = 12/145 (8%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G +G  GA G  G+KG RG KG  G  G  G  G  G+ G  GP G MG  GP+
Sbjct: 279 GFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPLGPR 338

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG+ G+ GP+G    PG+ G  G         + G PG  G  GIPG  G PG  G+ 
Sbjct: 339 GMPGERGRLGPQG---APGQRGTHG---------MPGKPGPMGPLGIPGSSGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G +G  GP+G RG++G  G
Sbjct: 387 GEAGPTGARGPEGPQGQRGETGPPG 411



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 75/151 (49%), Gaps = 12/151 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G        G +
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVG------ATGSK 320

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIP 232
           G+ GP G MG  G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G P
Sbjct: 321 GEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGTHGMPGKPGPMGPLGIPGSSGFP 380

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  GE G TG RG  G  G  G  G P 
Sbjct: 381 GNPGMKGEAGPTGARGPEGPQGQRGETGPPG 411



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP         E
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGP---------E 584

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK GP G  G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    
Sbjct: 585 GKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR--- 641

Query: 218 GIPGKDG 224
           G PGKDG
Sbjct: 642 GAPGKDG 648



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 79/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------------KGD 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP                   G 
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGAPGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+ G  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRTGKRGLLGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------------ 217
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPPGAPGPA 929

Query: 218 ---GIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 71/150 (47%), Gaps = 2/150 (1%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G  G  G  G+PG  G+PG +G RG KG  G  G +G  G  G  G  G 
Sbjct: 269 PGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGP 328

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G  G  G  G+PG+ G  G  G PG  GT+G  G  GP G  G  G +G PG P +   
Sbjct: 329 MGAMGPLGPRGMPGERGRLGPQGAPGQRGTHGMPGKPGPMGPLGIPGSSGFPGNPGMKGE 388

Query: 268 KRESCSLLPNSETSQL--LIPPTIVGSEHI 295
              + +  P     Q     PP  VGS+ +
Sbjct: 389 AGPTGARGPEGPQGQRGETGPPGPVGSQGL 418



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 89/233 (38%), Gaps = 84/233 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP    G+PG +G R   GP G  
Sbjct: 849  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 908

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 909  GFPGSAGRVGPPGPPGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 968

Query: 194  ---------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
                                 G  G  G+PG+ G  G+PG  G  G PGK G        
Sbjct: 969  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGAPGDK 1028

Query: 226  -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                             PG +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 1029 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1081



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 49/90 (54%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRTGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+ G +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLLGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 79/197 (40%), Gaps = 63/197 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGLD---------------GRDGLPGEPGLDG 209
            P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886  PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPPGAPGPAGPLGEPGKEGPPGLRG 945

Query: 210  IPG------------------------------------------RNGMDGIPGKDGLPG 227
             PG                                          + G+ G+PG+ G  G
Sbjct: 946  DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1005

Query: 228  KDGIPGTNGTNGEKGMT 244
              G+PG  GT G+ G T
Sbjct: 1006 MPGLPGPAGTPGKVGPT 1022



 Score = 39.3 bits (90), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 208 DGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           DG PGRN      G  G PG  G PG  G+PG  G  G KG+ GP+G  G +G  G
Sbjct: 266 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKG 321


>gi|149046234|gb|EDL99127.1| procollagen, type V, alpha 2 [Rattus norvegicus]
          Length = 1498

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 471 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 521

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 522 APGNRGFPGSDGLPGPKGAQGERGPIGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 581

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 582 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPG 638



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 92/170 (54%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G++G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 458 GPQGIRGQLGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 514

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 515 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPIGSSGPKGGQGDPGR---PGEPGLPGAR 571

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 572 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 621



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 77/161 (47%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  GA G  GP GP G  G  G R
Sbjct: 278 GFSGSPGARGFPGAPGLPGLKGHRGNKGLEGPKGEVGAPGAKGEAGPTGPMGAMGPLGPR 337

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G+ G  GPQG PG  G  G  G  G  G +G+ G  G PG PG+ G  G  G  G  
Sbjct: 338 GMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGVKGEAGPTGARGPE 397

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G+ G PG  G++G  G  G  G  G  G  G PGT
Sbjct: 398 GPQGQRGETGPPGPAGSHGLPGAVGTDGTPGAKGPTGSPGT 438



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G++G  GPKG++G PG +G  G  
Sbjct: 266 GEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGNKGLEGPKGEVGAPGAKGEAGPT 325

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 326 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGVK 385

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G  GP+G RG++G  G  G+
Sbjct: 386 GEAGPTGARGPEGPQGQRGETGPPGPAGS 414



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 86/164 (52%), Gaps = 9/164 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 278 GFSGSPGARGFPGAPGLPGLKGHRGNKG---LEGPKGEVGAPGAKGEAGPTGPMGAMGPL 334

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G  G  G PG  G  GIPG +G  G PG  G  G  
Sbjct: 335 GPRGMPGERGRLGPQ---GAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGVKGEAGPT 391

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           G  G  G  G++G TGP G  G  G+ G  GT      K  + S
Sbjct: 392 GARGPEGPQGQRGETGPPGPAGSHGLPGAVGTDGTPGAKGPTGS 435



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 94/173 (54%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------ 154
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +G+P      
Sbjct: 746 GPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGSLGPP 805

Query: 155 ------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                 G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 806 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 864

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G +G  G+ G RG +G  G  G PG+
Sbjct: 865 --PGQKGDAGSPGPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGS 912



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 87/210 (41%), Gaps = 60/210 (28%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-------- 149
            ++G    T    P G QG  G+ G  G  G  G+ G  G  G PG  GP G        
Sbjct: 383 GVKGEAGPTGARGPEGPQGQRGETGPPGPAGSHGLPGAVGTDGTPGAKGPTGSPGTSGPP 442

Query: 150 ----------------PQGI---------PGDEGKRGPKGDMGYPGPQGI------PGDE 178
                           PQGI         PG +G+ GPKG+   PGP GI      PG+E
Sbjct: 443 GLAGPPGSPGPQGSTGPQGIRGQLGDPGVPGFKGEAGPKGE---PGPHGIQGPIGPPGEE 499

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           GKRGP+GD                  PG  G PG  G  G PG  G PG DG+PG  G  
Sbjct: 500 GKRGPRGD------------------PGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQ 541

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           GE+G  G  G +G  G  G PG P +   +
Sbjct: 542 GERGPIGSSGPKGGQGDPGRPGEPGLPGAR 571



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 988  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1041

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1042 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGE 1101

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1102 PGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1145



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 91/189 (48%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 577 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGV 636

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 637 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 696

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PGEPG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+GN G +G  G  G 
Sbjct: 697 PGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGP 756

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 757 PGLQGMPGE 765



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 87/172 (50%), Gaps = 27/172 (15%)

Query: 113 GLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEG------KR 160
           GL+GP G+ G  GAKGE      MG  G  G +G PG  G  GPQG PG  G      K 
Sbjct: 305 GLEGPKGEVGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKP 364

Query: 161 GPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GP G +G PG  G PG+   +G+ GP G  G  G  G  G  G PG  G  G+PG  G D
Sbjct: 365 GPMGPLGIPGSSGFPGNPGVKGEAGPTGARGPEGPQGQRGETGPPGPAGSHGLPGAVGTD 424

Query: 218 GIPGKDGLPGKDGIPGT---------NGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG     G  G PGT          G+ G +G TGP+G RG+ G  GVPG
Sbjct: 425 GTPGAK---GPTGSPGTSGPPGLAGPPGSPGPQGSTGPQGIRGQLGDPGVPG 473



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 75/156 (48%), Gaps = 21/156 (13%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK---------------GERGEKG 140
           L  M G         P G +G +G+KG  G  G  G +               GE+GE G
Sbjct: 759 LQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGSLGPPGPAGPTGEKGEPG 818

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------GIPGDEGKRGPKGDMGYPGRIG 194
             G+VGPPG +G PG  G+ GP G +G+ GPQ      G+ G+ G+ G KGD G PG  G
Sbjct: 819 PRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQG 878

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           L G  G  G  G+ G+ G  G  G PG  G PG  G
Sbjct: 879 LAGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGSAG 914



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 82/172 (47%), Gaps = 33/172 (19%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPK---------GDMGYP 169
           GE GA G +G +GERG   E+G PG+ G PG +G+ G  G  GPK         GD G P
Sbjct: 698 GEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPP 757

Query: 170 GPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGE---------------PGLDGIP 211
           G QG+PG+    G  GPKGD G  G  G +G  G  G                 G  G P
Sbjct: 758 GLQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGSLGPPGPAGPTGEKGEP 817

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 818 GPRGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 866



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 84/191 (43%), Gaps = 30/191 (15%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGI 153
           V   G         P G  GP+G +G  G +G +G +G  G++GA   PG  GP GP GI
Sbjct: 313 VGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGI 372

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG  G  G  G  G  GP G  G EG +G +G+ G PG  G     GLPG  G DG PG 
Sbjct: 373 PGSSGFPGNPGVKGEAGPTGARGPEGPQGQRGETGPPGPAG---SHGLPGAVGTDGTPGA 429

Query: 214 NGMDGIP---------------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G P                     G  G+ G+ G PG  G  GE    GP+G  G 
Sbjct: 430 KGPTGSPGTSGPPGLAGPPGSPGPQGSTGPQGIRGQLGDPGVPGFKGE---AGPKGEPGP 486

Query: 253 SGINGVPGTPA 263
            GI G  G P 
Sbjct: 487 HGIQGPIGPPG 497



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 88/190 (46%), Gaps = 39/190 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 600 PPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 659

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PG+ G     GP+G+ G PG  G
Sbjct: 660 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGEPGAVGPLGPRGERGNPGERG 719

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
             G  GLPGE G+ G  G +G  G PG  G  G  G PG  G  GE+G+    GP+G+RG
Sbjct: 720 EPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRG 779

Query: 252 KSGINGVPGT 261
             G  G  GT
Sbjct: 780 GVGEKGAEGT 789



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 70/148 (47%), Gaps = 27/148 (18%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           ++G  G PG VGP GP+G  G+ G+RG  G  G PG +G+ G  G  GPKG+ G  G IG
Sbjct: 693 DQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIG 752

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT----------------- 237
                   G PGL G+PG  G+ G PG  G  G  G  G  GT                 
Sbjct: 753 DT------GPPGLQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGSLGPPG 806

Query: 238 ----NGEKGMTGPRGNRGKSGINGVPGT 261
                GEKG  GPRG  G  G  G PG+
Sbjct: 807 PAGPTGEKGEPGPRGLVGPPGSRGNPGS 834



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 65/140 (46%), Gaps = 39/140 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G  G  G  G +G +G+RG+         PGP G+PG +G        G PGP
Sbjct: 1045 PGPEGPAGNDGTPGRDGAVGERGDRGD---------PGPAGLPGSQGA------PGTPGP 1089

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PGD G+R                  G PG  G  G PGR       GK GLPG  G 
Sbjct: 1090 VGAPGDAGQR------------------GEPGSRGPVGPPGRA------GKRGLPGPQGP 1125

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G NG++G  G +G+RG
Sbjct: 1126 RGDKGDNGDRGDRGQKGHRG 1145



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  G+ G RGP G  G  G 
Sbjct: 1057 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGEPGSRGPVGPPGRAGK 1116

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1117 RGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1146



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 90/233 (38%), Gaps = 84/233 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G P   GP G+PG +G R   GP G  
Sbjct: 848  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHGVPGLKGGRGTQGPPGAT 907

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 908  GFPGSAGRVGPPGPAGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGSPGDK 967

Query: 194  GLDGRD---------------------GLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
            G  G D                     G+PG+ G  G+PG  G  G PGK G        
Sbjct: 968  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 1027

Query: 226  -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                             PG +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 1028 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1080



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 81/198 (40%), Gaps = 63/198 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 825  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 884

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 885  PHGPHGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPIGEPGKEGPPGLRG 944

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 945  DPGSHGRVGDRGPAGPPGSPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1004

Query: 228  KDGIPGTNGTNGEKGMTG 245
              G+PG  GT G+ G TG
Sbjct: 1005 MPGLPGPAGTPGKVGPTG 1022


>gi|624871|dbj|BAA07368.1| a1(XIX) collagen chain precursor [Homo sapiens]
          Length = 1142

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 91/200 (45%), Gaps = 58/200 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  GP GQKGE    GE   KGE+G++G PGV+G                       G 
Sbjct: 470 PGSVGPKGQKGE---PGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQ 526

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK----------------GDMGYPGRIG 194
           QG  G  G RGP GD+G PG  GIPG +G +G K                G+ G PG+  
Sbjct: 527 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKS- 585

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGM 243
                 LPGEPGLDG PG  G  G  G+ GLPG             GIPG  G  G  G 
Sbjct: 586 ------LPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGE 639

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            G +G RG  G+ G PGTP 
Sbjct: 640 PGIQGPRGLPGLPGTPGTPG 659



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 70/147 (47%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG----------------EK 139
           L   QG   S     PPG    +G  GE G  G+ G+KGE+G                E 
Sbjct: 523 LKGQQGSAGSMGPRGPPG---DVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEA 579

Query: 140 GAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPG---------PQGI--PGDEGKRGPKGD 186
           G PG  + G PG  G PG  G RGPKG+ G PG         PQGI  PG  G +GP G+
Sbjct: 580 GPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGE 639

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG+PGR
Sbjct: 640 PGIQGPRGLPGLPGTPGTPGNDGVPGR 666



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 82/196 (41%), Gaps = 62/196 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  G +G KG+ G  GE   KGE+G++G PGV+G                       G 
Sbjct: 467 PGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQ 526

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK-------------------GDMG--Y 189
           QG  G  G RGP GD+G PG  GIPG +G +G K                   G  G   
Sbjct: 527 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKSL 586

Query: 190 PGRIGLDGRDGLPGE---------PGLDG-----------IPGRNGMDGIPGKDGLPGKD 229
           PG  GLDG  G PG          PG+ G           IPGR G  G  G+ G+ G  
Sbjct: 587 PGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGEPGIQGPR 646

Query: 230 GIPGTNGTNGEKGMTG 245
           G+PG  GT G  G  G
Sbjct: 647 GLPGLPGTPGTPGNDG 662



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 70/145 (48%), Gaps = 24/145 (16%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPG---------------DEGKRGPKGDMGYPGPQ 172
           G MG+ G  G  G  G  GP GP GI G               + G+RGP GD+G+PGP+
Sbjct: 860 GAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGPE 919

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                    GP G  G  G+ G+ G +G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 920 ---------GPSGKPGINGKDGIPGAEGIMGKPGDRGPKGERGDQGIPGDRGSQGERGKP 970

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G  GP GN+G  G  G
Sbjct: 971 GLTGMKGAIGPMGPPGNKGSMGSPG 995



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 78/168 (46%), Gaps = 33/168 (19%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A G  G KGE G  G PG VGP G +G PG+   +G KGD G PG  G  G +G+ G  G
Sbjct: 454 AGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPG 513

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI-------------- 231
             G  G  GL G+ G  G  G  G PG  G+   PG+ G+PGK GI              
Sbjct: 514 PPGLIGSPGLKGQQGSAGSMGPRGPPGDVGL---PGEHGIPGKQGIKGEKGDPGGIIGPP 570

Query: 232 ----------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                           PG  G +G  G  GPRG +G+ G+ GV G+P 
Sbjct: 571 GLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPG 618



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 62/131 (47%), Gaps = 36/131 (27%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
           PG  G+PG EG  G KGD G  GP GI G               + G+RGP GD+G+PG 
Sbjct: 859 PGAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGP 918

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGN 249
            G  G+ G                  I GKDG+PG +GI   PG  G  GE+G  G  G+
Sbjct: 919 EGPSGKPG------------------INGKDGIPGAEGIMGKPGDRGPKGERGDQGIPGD 960

Query: 250 RGKSGINGVPG 260
           RG  G  G PG
Sbjct: 961 RGSQGERGKPG 971



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 92/240 (38%), Gaps = 83/240 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------DEGKRGPKGD 165
           PG  G  G++G  G+KGE G KGE+GEKG P + G  G  G+ G        G +G KGD
Sbjct: 321 PGFPGQKGEQGFEGSKGETGEKGEQGEKGDPALAGLNGENGLKGVLGPHGPPGPKGEKGD 380

Query: 166 ------------MGYPGPQGIPGDEGKRGP------------------------------ 183
                       +G  GPQG PG EG+RG                               
Sbjct: 381 TGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLGG 440

Query: 184 -----------------KGDM------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                            KGD       G+PG +G  G+ G PGEP   G  G  G  G+ 
Sbjct: 441 DDNKDNKGNDEHEAGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVI 500

Query: 221 GKDG------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G            L G  G+ G  G+ G  G  GP G+ G  G +G+PG   I   K
Sbjct: 501 GSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEK 560



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 9/83 (10%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KGE G  G  G  G++G KG PG  G  G  G PG       KG+ G+ G +G  G++G+
Sbjct: 291 KGEAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQ------KGEQGFEGSKGETGEKGE 344

Query: 181 RGPKGDMGYPGRIGLDGRDGLPG 203
           +G KGD   P   GL+G +GL G
Sbjct: 345 QGEKGD---PALAGLNGENGLKG 364



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G PG    PG  G++G KG+   PG  GL G  G PG+ G  G  G  G  G  G+
Sbjct: 291 KGEAGLPG---APGSPGQKGHKGE---PGENGLHGAPGFPGQKGEQGFEGSKGETGEKGE 344

Query: 223 DGLPGKDGIPGTNGTNGEKGM 243
            G  G   + G NG NG KG+
Sbjct: 345 QGEKGDPALAGLNGENGLKGV 365



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G++G+ G  G+ G +GERG+ G  G+ G  GP G PG+      KG MG PG 
Sbjct: 943 PGDRGPKGERGDQGIPGDRGSQGERGKPGLTGMKGAIGPMGPPGN------KGSMGSPGH 996

Query: 172 Q 172
           Q
Sbjct: 997 Q 997



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 34/69 (49%)

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE GL G PG  G  G  G+ G  G  G PG  G  GE+G  G +G  G+ G  G  G P
Sbjct: 292 GEAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQKGEQGFEGSKGETGEKGEQGEKGDP 351

Query: 263 AICAYKRES 271
           A+     E+
Sbjct: 352 ALAGLNGEN 360


>gi|395534434|ref|XP_003769246.1| PREDICTED: collagen alpha-1(XIX) chain [Sarcophilus harrisii]
          Length = 1169

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/159 (45%), Positives = 90/159 (56%), Gaps = 19/159 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------P 162
           PG  G  GQKGE G +G +G++G +G+KG PG  GPPG  G  G +G++G         P
Sbjct: 611 PGSVGLKGQKGETGKQGNIGLQGIKGDKGEPGDAGPPGLIGNSGIKGQQGQAGPMGPRGP 670

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            G++G PG  GI G  G  G KG+ G PG         LPGEPGLDGIPG  G  G  G+
Sbjct: 671 PGNIGDPG--GIIGPPGHPGTKGEAGPPGIS-------LPGEPGLDGIPGTPGPRGPKGE 721

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            GLPG  G+PG  G  G  G+ G  G RG  G+ G PG+
Sbjct: 722 RGLPGVHGLPGDIGPPG-MGIPGQPGPRGLPGLPGAPGS 759



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 79/182 (43%), Gaps = 51/182 (28%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            +G  G+KGERG  G PG  G  G QG+PG  G  GP G  G  G  G PG  G +G KG+
Sbjct: 824  EGPKGIKGERGYSGLPGEKGEEGLQGMPGTPGAPGPVGPAGSLGRIGHPGPPGAKGEKGN 883

Query: 187  ------------------------MGYPGRIGLDGRDGLPGEPGLDGIPGRN-------- 214
                                     G+P   G+ G  G  G PG+ GIPG++        
Sbjct: 884  EGSPGKPGPPGPPGEPGPMGLPGLEGFP---GVKGDRGPVGSPGIAGIPGKSGAPGPPGV 940

Query: 215  ----------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                            G +G  GK G+ GKDG PG  G  G  G  GP+G RGK G+ GV
Sbjct: 941  PGEPGERGPIGDIGFPGPEGPTGKPGINGKDGSPGLQGDQGIPGDRGPQGERGKPGLPGV 1000

Query: 259  PG 260
             G
Sbjct: 1001 KG 1002



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 87/170 (51%), Gaps = 30/170 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------------QGIPGDEGK 159
            PG  GP G  G IG  G  G KGE+G +G+PG  GPPGP            +G PG +G 
Sbjct: 857  PGPVGPAGSLGRIGHPGPPGAKGEKGNEGSPGKPGPPGPPGEPGPMGLPGLEGFPGVKGD 916

Query: 160  RGPKGDMGYPGPQGIPGDE------------GKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            RGP   +G PG  GIPG              G+RGP GD+G+PG  G  G+ G+ G+   
Sbjct: 917  RGP---VGSPGIAGIPGKSGAPGPPGVPGEPGERGPIGDIGFPGPEGPTGKPGINGK--- 970

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            DG PG  G  GIPG  G  G+ G PG  G  G  G  GP GN+G  G  G
Sbjct: 971  DGSPGLQGDQGIPGDRGPQGERGKPGLPGVKGIIGPMGPPGNKGSPGTPG 1020



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 125/337 (37%), Gaps = 130/337 (38%)

Query: 60  FVPPDLYEEIREREKEQQNSTHNNPWVWLNAY-SRI-------PLVAMQGFC--NSTKEY 109
           FV  ++  EI + +  QQ+S      +   A+ S+I       P +A +  C  N  +  
Sbjct: 389 FVAQEMCCEISDAKCPQQDSFGTAASLMATAHASKISAHLLAKPELAERCQCIPNKGESG 448

Query: 110 CP--PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD-------- 156
            P   GL GP G KGE   IG+KGE G  G  GEKG  G +GPPGP+G  G+        
Sbjct: 449 LPGAAGLPGPKGDKGEQGTIGSKGEYGDPGIPGEKGLKGDLGPPGPRGQKGEKGHPLSLL 508

Query: 157 -------------------------EGKRGP----------KGDMGYP------------ 169
                                    EG+ GP           G +G P            
Sbjct: 509 DSSSCYIITLGETSQGNCGNSASSNEGEIGPPGPPTLILWFAGAIGLPPLRSKQIFKIGS 568

Query: 170 ----GPQGIPGDEGKR---------------------------------GPKGDMGYPGR 192
               GPQG PG EG+R                                 G KG+ G  G 
Sbjct: 569 LGLEGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGETGQPGFPGSVGLKGQKGETGKQGN 628

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------------------GLPGKDGIPG 233
           IGL G  G  GEPG  G PG  G  GI G+                    G+ G  G PG
Sbjct: 629 IGLQGIKGDKGEPGDAGPPGLIGNSGIKGQQGQAGPMGPRGPPGNIGDPGGIIGPPGHPG 688

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           T G  G  G++ P    G+ G++G+PGTP     K E
Sbjct: 689 TKGEAGPPGISLP----GEPGLDGIPGTPGPRGPKGE 721



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 73/177 (41%), Gaps = 56/177 (31%)

Query: 112  PGLQGPIGQKG------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PG +GP G+ G        G +G+ G+ G+RG +G  G  G PG +GI G  G  G KG 
Sbjct: 956  PGPEGPTGKPGINGKDGSPGLQGDQGIPGDRGPQGERGKPGLPGVKGIIGPMGPPGNKGS 1015

Query: 166  MGYPGPQ---------GIPGDE------------------------------------GK 180
             G PG Q         GIP D                                       
Sbjct: 1016 PGTPGYQGPPGTPGTPGIPADAVSFEEIKNYINQEVLRIFEERMALFLSQMKLPAAMLSA 1075

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            +G  G  G PG+   DG  GLPG+PG  G  G+ G  G PG  GLPG  G+PG + T
Sbjct: 1076 QG-HGKPGAPGK---DGLPGLPGDPGPRGYRGQKGERGEPG-IGLPGNPGLPGPSAT 1127


>gi|200214|gb|AAA68099.1| pro-alpha-1 type II collagen [Mus musculus]
          Length = 1442

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/181 (42%), Positives = 90/181 (49%), Gaps = 30/181 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           P G  GP G  G+ GAKG+ G  G++G+ GAPG  GP   PGPQG  G  G +G +G  G
Sbjct: 787 PAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQG 846

Query: 168 YPGPQGIPGDEG---------------------KRGPKG---DMGYPGRI---GLDGRDG 200
            PG  G PG  G                     K GPKG   D G PGR    GL+G  G
Sbjct: 847 PPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLEGPAG 906

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGE G  G  G +G+DG PG  GL G+ GI G  G  GE+G  G  G  G+ G  G PG
Sbjct: 907 APGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 966

Query: 261 T 261
            
Sbjct: 967 A 967



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 88/189 (46%), Gaps = 39/189 (20%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 643 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPG 702

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G R               G KG+ G
Sbjct: 703 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEAG 762

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG  G  G  G PGEPG  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G
Sbjct: 763 PPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 822

Query: 249 NRGKSGING 257
             G  G  G
Sbjct: 823 PSGAPGPQG 831



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 85/199 (42%), Gaps = 57/199 (28%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE G  G  G  G RG  G PG  GPPGP G              GD+G+ G KGD 
Sbjct: 756 GEKGEAGPPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDA 815

Query: 167 GYPGPQ---GIPGDE------------GKRGPKGDMGYPGRIGL---------------- 195
           G PGPQ   G PG +            G +GP G  G+PG  G                 
Sbjct: 816 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPP 875

Query: 196 --------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                          G  G  G+PGL+G  G  G  G PG DG  G DG PG  G  G++
Sbjct: 876 GPAGKDGPKGVRGDSGPPGRAGDPGLEGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQR 935

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G+ G  G RG+ G  G+PG
Sbjct: 936 GIVGLPGQRGERGFPGLPG 954



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 88/190 (46%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPK--------- 163
           GP+G KG+ G  G  G KG++G KG     GP GPQG P   G+EGKRG +         
Sbjct: 402 GPLGPKGQAGEPGIAGFKGDQGPKG---ETGPAGPQGAPGPAGEEGKRGARGEPGGAGPI 458

Query: 164 ---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMD 217
              G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ 
Sbjct: 459 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLT 518

Query: 218 GIPG---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG                             G PG  G PG  G NGE G  G +G  
Sbjct: 519 GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLA 578

Query: 251 GKSGINGVPG 260
           G  G+ G+PG
Sbjct: 579 GAPGLRGLPG 588



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 87/209 (41%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGK------------- 159
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG +G              
Sbjct: 330 GEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 389

Query: 160 --------------------------------RGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                           +GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 390 GPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGEEGKRGAR 449

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 450 GEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 506

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 507 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 535



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 88/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 806  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGA 865

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G+ GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 866  NGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLEGPAGAPGEKGEPGDDGPSGLDGP 925

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 926  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 985

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 986  AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1016



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 97/240 (40%), Gaps = 75/240 (31%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 703 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEAG 762

Query: 141 APGV---------------VGPPGPQGIP------------GDEGKRGPKGDMGYPGPQG 173
            PG                 GPPGP G              GD+G+ G KGD G PGPQG
Sbjct: 763 PPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 822

Query: 174 IPGDEGKRGP---------KGDMGYPGRIGLDG------------------------RDG 200
             G  G +GP         +G  G PG  G  G                        +DG
Sbjct: 823 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDG 882

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ GI G+PG
Sbjct: 883 PKGVRGDSGPPGRAGDPGLEGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPG 942



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 88/209 (42%), Gaps = 60/209 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 477 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 536

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM- 216
                         +G PG  G  GPKG  G PG+ G     GL G PGL G+PG++G  
Sbjct: 537 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAG---EKGLAGAPGLRGLPGKDGET 593

Query: 217 -----------------DGIPGK---------------------DGLPGKDGIPGTNGTN 238
                             G PG                       G+PG+ G PG  G  
Sbjct: 594 GAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPR 653

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAI 264
           GE+G  G RG+ G  G+    G+PGTP  
Sbjct: 654 GERGFPGERGSPGAQGLQGPRGLPGTPGT 682



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 75/169 (44%), Gaps = 36/169 (21%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 705 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 758

Query: 164 GDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G+ G PGP      +G PG+ G+ GP G  G+ G  G DG+ G  G+          G  
Sbjct: 759 GEAGPPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGD---------QGEA 809

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G  G  G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 810 GQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 858



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 89/223 (39%), Gaps = 72/223 (32%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------------VGPPGP- 150
           G  GP G  GE G  GE G+ G  G +G PG                       G PGP 
Sbjct: 558 GFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQGAPGPS 617

Query: 151 --------------------QGIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDM 187
                               QGIPG+ G  G   P+G+ G+PG +G PG +G +GP+G  
Sbjct: 618 GFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLP 677

Query: 188 GYPGRIGLDGR---------------DGLPGEPGLDGIPGRNGMDG---IPGKDGLPGKD 229
           G PG  G  G                 G+PGE G  GI G  G  G     G +G PGKD
Sbjct: 678 GTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKD 737

Query: 230 GIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G           G NGEKG  GP G  G +G  G PG P 
Sbjct: 738 GGRGLTGPIGPPGPAGANGEKGEAGPPGPSGSTGARGAPGEPG 780



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 80/189 (42%), Gaps = 54/189 (28%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKG 164
            PPG  G  G +G  GA GE   KGE G+ G  G+ GPPGPQG+ G  G      +RG +G
Sbjct: 892  PPGRAGDPGLEGPAGAPGE---KGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERG 948

Query: 165  DMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDG 209
              G PGP G PG +G  G  GD                G PGR G          PG DG
Sbjct: 949  FPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADG 999

Query: 210  IPGRNGMDGIPGKDG---------------------LPGKDGIPGTNGTNGEKGMTGPRG 248
             PGR+G  G+ G  G                       GK G  G  G  G  G +GP G
Sbjct: 1000 PPGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAG 1059

Query: 249  NRGKSGING 257
             RG +G  G
Sbjct: 1060 ARGIAGPQG 1068



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 76/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G       +G PG+ G  GP G  G PG  GIPG +G       
Sbjct: 329 KGEAGPTGARGPEGAQGS------RGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 382

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GE    G  G PG  G 
Sbjct: 383 AGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGE 442

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 443 EGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 502

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 503 PGRPGEPGLPGAR 515



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 79/223 (35%), Gaps = 81/223 (36%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG---------EKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GP+G +G  G  G  GVKG RG         E GAPGV G     G PG+ G  GP 
Sbjct: 222 GLPGPMGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGE---SGSPGENGSPGPM 278

Query: 164 GDMGYPG------------------------------------------PQGIPGDEGKR 181
           G  G PG                                           +G  G  G R
Sbjct: 279 GPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGAR 338

Query: 182 GP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG----------------- 221
           GP   +G  G PG  G  G  G  G PG DGIPG  G  G PG                 
Sbjct: 339 GPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ 398

Query: 222 -------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                    G  G+ GI G  G  G KG TGP G +G  G  G
Sbjct: 399 GATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAG 441



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 83/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 239 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 298

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +G +G+ G PG  G 
Sbjct: 299 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGP 358

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 359 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGI 415

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 416 AGFKGDQGPKGETGPAGPQGAPG-PAGEEGKR 446



 Score = 43.5 bits (101), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 3/70 (4%)

Query: 173 GIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG  G+RG   P G  G+PG  GL G  G  G PGLDG  G  G  G+ G+ G PG++
Sbjct: 213 GKPGKSGERGLPGPMGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN 272

Query: 230 GIPGTNGTNG 239
           G PG  G  G
Sbjct: 273 GSPGPMGPRG 282


>gi|308501333|ref|XP_003112851.1| CRE-EMB-9 protein [Caenorhabditis remanei]
 gi|308265152|gb|EFP09105.1| CRE-EMB-9 protein [Caenorhabditis remanei]
          Length = 1804

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 90/174 (51%), Gaps = 17/174 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+ G  GQ G  G +G  G+ G+RG  G PG  G PG  G+PG EG     GD GYPG 
Sbjct: 1340 PGVPGEPGQTGYPGERGLTGIDGKRGHDGLPGQPGAPGLDGVPGTEGD---CGDDGYPGA 1396

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------ 225
             G PG  G  G +G  G PG+ G  G +G PG+PG+ G+ G  G DG PG+DGL      
Sbjct: 1397 PGQPGSNGYPGERGLPGVPGQQGRSGENGFPGQPGIPGLKGSRGDDGFPGRDGLDGVPGR 1456

Query: 226  PGKDGIPG--------TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            PG  G+PG          G  G+ G  G +G  G  G NG+PG P    Y   S
Sbjct: 1457 PGFAGMPGPMAMLVRNPTGAPGDNGYPGEKGYPGLPGDNGLPGPPGKAGYPGAS 1510



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 92/171 (53%), Gaps = 18/171 (10%)

Query: 112  PGLQGPIGQKGEIGAKGE------------MGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            PG+ GP GQ G+ G  G              G+ G +GE G PG+ G  G  GIPG  G 
Sbjct: 1104 PGIPGPNGQPGDAGYDGLDGVPGPPGYPGITGMPGLKGESGQPGLPGRQGNDGIPGAPGL 1163

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
             G  GD G+PG  G PG  G++G +G+ GYPG  G +G  GL G+ GL G+ G NG+DG 
Sbjct: 1164 EGECGDEGFPGAPGQPGYPGQQGREGEKGYPGMPGENGLPGLRGQDGLPGLKGENGLDGQ 1223

Query: 220  PGKDGLPGK------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PG  G PG+       G PG+ G NG+ G+ G  G  G  G NG PG P +
Sbjct: 1224 PGYPGSPGQLGSPGDVGYPGSPGENGDNGLPGRDGQPGLRGENGQPGMPGL 1274



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 92/187 (49%), Gaps = 22/187 (11%)

Query: 112 PGLQGPIG----------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
           PG QGP G            GE G  G  G+ G+RG  G PG+ GP GP G PG  G+RG
Sbjct: 739 PGAQGPRGIPAPLRIINQVAGEPGIDGLPGLPGDRGADGLPGLPGPVGPDGYPGTPGERG 798

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
             G  G+PG  G PG  G++         G +G +G DG  GEPGLDG PG  G  G PG
Sbjct: 799 MDGLPGFPGLHGEPGMRGQQ---------GEVGYNGVDGDCGEPGLDGYPGVPGAPGAPG 849

Query: 222 KD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY-KRESCSLLPNS 278
           +   G PG+ G PG NG  G  G+ G  G  G+ G+ G PG P       ++    LP +
Sbjct: 850 ETGYGFPGQVGYPGPNGEPGAAGLPGSDGYPGRDGLPGTPGYPGEAGMNGQDGMPGLPGT 909

Query: 279 ETSQLLI 285
                L+
Sbjct: 910 RGESGLV 916



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 93/170 (54%), Gaps = 11/170 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP+G  G  G  GE G+ G     G PG+ G PG +G  G+ G  G  GD G PG 
Sbjct: 779 PGLPGPVGPDGYPGTPGERGMDGL---PGFPGLHGEPGMRGQQGEVGYNGVDGDCGEPGL 835

Query: 172 QGIPGDEGKRGPKGDMGY--PGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPG---KD 223
            G PG  G  G  G+ GY  PG++G  G +G PG    PG DG PGR+G+ G PG   + 
Sbjct: 836 DGYPGVPGAPGAPGETGYGFPGQVGYPGPNGEPGAAGLPGSDGYPGRDGLPGTPGYPGEA 895

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           G+ G+DG+PG  GT GE G+ G  G +G+ G  G  G   +  Y+ E  +
Sbjct: 896 GMNGQDGMPGLPGTRGESGLVGIDGKKGRDGPQGPRGNDGVPGYRGEGGA 945



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 88/173 (50%), Gaps = 15/173 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ G  G  G  G +GE G+ G  G+KG  G  GP G  G+PG  G+ G  G  G  G  
Sbjct: 896  GMNGQDGMPGLPGTRGESGLVGIDGKKGRDGPQGPRGNDGVPGYRGEGGAPGQYGMDGYP 955

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---------------D 217
            G PGD+G  G  G  GYPG  GL+G DGL G PGL G  G NG+               D
Sbjct: 956  GAPGDQGYPGAPGQDGYPGAPGLNGEDGLVGFPGLRGEHGENGLPGLEGECGEEGSRGQD 1015

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+PG  G  G+DG+PG  G +G  G+ G  G+ G  G  G PG P   AY  +
Sbjct: 1016 GLPGYPGEQGQDGLPGLPGADGLPGLNGEPGDSGSPGFRGQPGEPGNLAYPGQ 1068



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 89/178 (50%), Gaps = 21/178 (11%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             M G   +  E    G+ G  G+ G  G +G  GV G RGE GAPG  G  G  G PGD+
Sbjct: 902  GMPGLPGTRGESGLVGIDGKKGRDGPQGPRGNDGVPGYRGEGGAPGQYGMDGYPGAPGDQ 961

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------------GEP 205
            G  G  G  GYPG  G+ G++G       +G+PG  G  G +GLP            G+ 
Sbjct: 962  GYPGAPGQDGYPGAPGLNGEDGL------VGFPGLRGEHGENGLPGLEGECGEEGSRGQD 1015

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            GL G PG  G DG+PG   LPG DG+PG NG  G+ G  G RG  G+ G    PG P 
Sbjct: 1016 GLPGYPGEQGQDGLPG---LPGADGLPGLNGEPGDSGSPGFRGQPGEPGNLAYPGQPG 1070



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 82/155 (52%), Gaps = 9/155 (5%)

Query: 123  EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
            E G  G+ G+ G  G  G PG  G PG +G+ G +GKRG  G  G PG  G+ G  G  G
Sbjct: 1327 EPGTPGQYGMPGLPGVPGEPGQTGYPGERGLTGIDGKRGHDGLPGQPGAPGLDGVPGTEG 1386

Query: 183  PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
              GD GYPG  G  G +G PGE GL G+PG+ G     G++G PG+ GIPG  G+ G+ G
Sbjct: 1387 DCGDDGYPGAPGQPGSNGYPGERGLPGVPGQQGRS---GENGFPGQPGIPGLKGSRGDDG 1443

Query: 243  MTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
                    G+ G++GVPG P           L+ N
Sbjct: 1444 FP------GRDGLDGVPGRPGFAGMPGPMAMLVRN 1472



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 91/196 (46%), Gaps = 49/196 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G +G+ G  G  GV G+ GE G  G  G PG  G PG+ G   P G +GYPGP
Sbjct: 806  PGLHGEPGMRGQQGEVGYNGVDGDCGEPGLDGYPGVPGAPGAPGETGYGFP-GQVGYPGP 864

Query: 172  QGIPGDEG---------KRGPKGDMGYPGRIGLDGRDGLPGEPGL--------------- 207
             G PG  G         + G  G  GYPG  G++G+DG+PG PG                
Sbjct: 865  NGEPGAAGLPGSDGYPGRDGLPGTPGYPGEAGMNGQDGMPGLPGTRGESGLVGIDGKKGR 924

Query: 208  ------------------DGIPGRNGMDGIPGKDG------LPGKDGIPGTNGTNGEKGM 243
                               G PG+ GMDG PG  G       PG+DG PG  G NGE G+
Sbjct: 925  DGPQGPRGNDGVPGYRGEGGAPGQYGMDGYPGAPGDQGYPGAPGQDGYPGAPGLNGEDGL 984

Query: 244  TGPRGNRGKSGINGVP 259
             G  G RG+ G NG+P
Sbjct: 985  VGFPGLRGEHGENGLP 1000



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 114/278 (41%), Gaps = 58/278 (20%)

Query: 44   KGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFC 103
            +G+  D   P  P     P    ++ RE EK        N    L     +P +  +   
Sbjct: 1164 EGECGDEGFPGAPGQPGYP---GQQGREGEKGYPGMPGENGLPGLRGQDGLPGLKGENGL 1220

Query: 104  NSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            +    Y  PG  G +G  G++G   + GE G  G  G  G PG+ G  G  G+PG +G+ 
Sbjct: 1221 DGQPGY--PGSPGQLGSPGDVGYPGSPGENGDNGLPGRDGQPGLRGENGQPGMPGLQGRD 1278

Query: 161  -----------------------GPKG---------------------DMGYPGPQGIPG 176
                                   GP G                     + G PG  G+PG
Sbjct: 1279 GQPGPIGPPGDDGYPGAPGQDTYGPPGQSGQDGYPGLDGLPGGPGLNGEPGTPGQYGMPG 1338

Query: 177  DEGKRGPKGDMGYPGRIGLDG------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              G  G  G  GYPG  GL G       DGLPG+PG  G+ G  G +G  G DG PG  G
Sbjct: 1339 LPGVPGEPGQTGYPGERGLTGIDGKRGHDGLPGQPGAPGLDGVPGTEGDCGDDGYPGAPG 1398

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             PG+NG  GE+G+ G  G +G+SG NG PG P I   K
Sbjct: 1399 QPGSNGYPGERGLPGVPGQQGRSGENGFPGQPGIPGLK 1436



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 91/178 (51%), Gaps = 32/178 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ G  G +GE G+ G  G++G  G +G PG QG PGD           YPG 
Sbjct: 671 PGLPGSPGQDGFPGLRGEPGLSGIDGKRGRQGSLGVPGFQGPPGDS----------YPGV 720

Query: 172 QGIPGDEGKRGPKGDMGYPG-----------RI--------GLDGRDGLPGEPGLDGIPG 212
            G PG +G+RG  G  G PG           RI        G+DG  GLPG+ G DG+PG
Sbjct: 721 PGTPGFKGERGQDGLPGLPGAQGPRGIPAPLRIINQVAGEPGIDGLPGLPGDRGADGLPG 780

Query: 213 RNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             G    DG PG  G  G DG+PG  G +GE GM G +G  G +G++G  G P +  Y
Sbjct: 781 LPGPVGPDGYPGTPGERGMDGLPGFPGLHGEPGMRGQQGEVGYNGVDGDCGEPGLDGY 838



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 91/183 (49%), Gaps = 26/183 (14%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            +   +G C        PG  G  G  GE G  G  G +G  GE G PG        GIPG
Sbjct: 1381 VPGTEGDCGDDGYPGAPGQPGSNGYPGERGLPGVPGQQGRSGENGFPGQP------GIPG 1434

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI--------GLDGRDGLPGEPGL 207
             +G R   GD G+PG  G+ G  G+    G  G PG +        G  G +G PGE G 
Sbjct: 1435 LKGSR---GDDGFPGRDGLDGVPGR---PGFAGMPGPMAMLVRNPTGAPGDNGYPGEKGY 1488

Query: 208  DGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGT 261
             G+PG NG+ G PGK G P   G+DG PG  G NG+ G +G    +G RG++G+ G+PGT
Sbjct: 1489 PGLPGDNGLPGPPGKAGYPGASGQDGYPGPPGLNGQPGPSGDSGFQGERGRAGLPGLPGT 1548

Query: 262  PAI 264
            P  
Sbjct: 1549 PGF 1551



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 76/156 (48%), Gaps = 16/156 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP+G  G +G  G  G  G +G+KG             PGD G+RG +G  G PG  
Sbjct: 270 GRDGPVGPPGMLGLDGPPGYPGLKGQKG------------DPGDAGQRGKRGKDGVPGSY 317

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----MDGIPGKDGLPGK 228
           G  G +G++G  G  GYPG  G  G  G PG PG +G  G  G      G PG  G  G 
Sbjct: 318 GEKGTQGEQGVPGTPGYPGTKGEAGESGYPGRPGFEGDCGPEGPLGEGTGEPGPRGAQGF 377

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           DG+ G  G  G  G+ GP G RG  G  G+PG P I
Sbjct: 378 DGVQGAKGLPGHNGLPGPVGPRGPVGAPGMPGMPGI 413



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 86/170 (50%), Gaps = 14/170 (8%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  GQKG+ G  G+ G +G+ G  G+ G  G  G QG+PG  G  G KG+ G  G
Sbjct: 286 PPGYPGLKGQKGDPGDAGQRGKRGKDGVPGSYGEKGTQGEQGVPGTPGYPGTKGEAGESG 345

Query: 171 PQGIPGDEGKRGPKGDM----GYPGRIGLDGRD------GLPGEPGLDGIPGRNGMDGIP 220
             G PG EG  GP+G +    G PG  G  G D      GLPG  GL G  G  G  G P
Sbjct: 346 YPGRPGFEGDCGPEGPLGEGTGEPGPRGAQGFDGVQGAKGLPGHNGLPGPVGPRGPVGAP 405

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G+PG DG+PG      EKG  G  G  G +G  G+PG    C Y  E
Sbjct: 406 GMPGMPGIDGMPGYT----EKGDRGEDGYPGFAGEPGLPGESGDCGYPGE 451



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 75/145 (51%), Gaps = 17/145 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PG QG  G+ G  G  G  G+KG RG+ G PG  G  G  G PG  G  GP         
Sbjct: 1415 PGQQGRSGENGFPGQPGIPGLKGSRGDDGFPGRDGLDGVPGRPGFAGMPGPMAMLVRNPT 1474

Query: 163  --KGDMGYPGPQG---IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
               GD GYPG +G   +PGD G  GP G  GYPG     G+DG PG PGL+G PG +G  
Sbjct: 1475 GAPGDNGYPGEKGYPGLPGDNGLPGPPGKAGYPG---ASGQDGYPGPPGLNGQPGPSGDS 1531

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G  G+ G  G  G+PGT G  G  G
Sbjct: 1532 GFQGERGRAGLPGLPGTPGFPGAPG 1556



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 93/208 (44%), Gaps = 56/208 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------------------- 149
            PG QG  G  G  GA G  G+ GE G+ G+PG  G PG                      
Sbjct: 1021 PGEQGQDGLPGLPGADGLPGLNGEPGDSGSPGFRGQPGEPGNLAYPGQPGDVGYPGPDGP 1080

Query: 150  -----PQGIPGDEGKRGPKGDM--GYPGPQGIPGDE------------------GKRGPK 184
                 P G+PG  G+RG  GD   G PGP G PGD                   G  G K
Sbjct: 1081 PGLAGPDGLPGLNGERGENGDSYPGIPGPNGQPGDAGYDGLDGVPGPPGYPGITGMPGLK 1140

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---------GIPGTN 235
            G+ G PG  G  G DG+PG PGL+G  G  G  G PG+ G PG+          G+PG N
Sbjct: 1141 GESGQPGLPGRQGNDGIPGAPGLEGECGDEGFPGAPGQPGYPGQQGREGEKGYPGMPGEN 1200

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G +G  G  G +G++G++G PG P 
Sbjct: 1201 GLPGLRGQDGLPGLKGENGLDGQPGYPG 1228



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 94/235 (40%), Gaps = 86/235 (36%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGV----VGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           G+ G  G  G++G  G  GEKG PG     VGPPG  G+PG+ G  G  G  GYPGP   
Sbjct: 498 GRDGYPGIPGDIGDPGYSGEKGFPGTGVNKVGPPGMTGLPGEPGMPGRIGIDGYPGP--- 554

Query: 175 PGDEGKRGP------------KGDMGY------------------------PGRIGLDGR 198
           PG+ G+RG             KGD GY                        PG+ G  G 
Sbjct: 555 PGNNGERGDDCGYCPDGLPGNKGDAGYPGMNGYPGPPGPNGEHGDCGMPGLPGKPGTAGA 614

Query: 199 DGLPGEPGLDGIPG-----------------------------------RNGMDGIPGKD 223
           DGL G PGL GIPG                                   R G DG+PG  
Sbjct: 615 DGLNGSPGLPGIPGYPGMKGEAGEIIGPMENPAGIPGLKGDRGLPGLPGRQGNDGLPGLP 674

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV--------PGTPAICAYKRE 270
           G PG+DG PG  G  G  G+ G RG +G  G+ G         PG P    +K E
Sbjct: 675 GSPGQDGFPGLRGEPGLSGIDGKRGRQGSLGVPGFQGPPGDSYPGVPGTPGFKGE 729



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 88/178 (49%), Gaps = 28/178 (15%)

Query: 109 YCPPGLQGPIGQKG---------------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           YCP GL G  G  G               E G  G  G+ G+ G  GA G+ G PG  GI
Sbjct: 567 YCPDGLPGNKGDAGYPGMNGYPGPPGPNGEHGDCGMPGLPGKPGTAGADGLNGSPGLPGI 626

Query: 154 PGDEGKRGPKGDMGYP--GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           PG  G +G  G++  P   P GIPG +G RG     G PGR G DG  GLPG PG DG P
Sbjct: 627 PGYPGMKGEAGEIIGPMENPAGIPGLKGDRG---LPGLPGRQGNDGLPGLPGSPGQDGFP 683

Query: 212 ---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK-----GMTGPRGNRGKSGINGVPGT 261
              G  G+ GI GK G  G  G+PG  G  G+      G  G +G RG+ G+ G+PG 
Sbjct: 684 GLRGEPGLSGIDGKRGRQGSLGVPGFQGPPGDSYPGVPGTPGFKGERGQDGLPGLPGA 741



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 76/164 (46%), Gaps = 37/164 (22%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G KGE G  G  GE G PG  G  GP+G+ G  G  G +GD G         D G +G +
Sbjct: 43  GTKGERGNPGFGGEPGHPGAPGLDGPEGVSGAPGMYGAEGDFG---------DGGAKGAR 93

Query: 185 GDMGYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPG------------------KD 223
           GD G PG     GL G DGLPG  G +G PG NG DG PG                  + 
Sbjct: 94  GDRGLPGAPGHSGLQGLDGLPGLKGEEGPPGCNGTDGFPGIPGLAGPPGQPGPNGMPGRH 153

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           GL    G PG  G N      G +G +G+SG +GVPG P    Y
Sbjct: 154 GL---SGPPGEGGVN----SQGRKGEKGESGRSGVPGLPGNSGY 190



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/156 (41%), Positives = 80/156 (51%), Gaps = 26/156 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDE-GKRGPKGDMGY 168
           G +G  G++G  G  G  G KGE GE G    PG  G  GP+G  G+  G+ GP+G  G+
Sbjct: 318 GEKGTQGEQGVPGTPGYPGTKGEAGESGYPGRPGFEGDCGPEGPLGEGTGEPGPRGAQGF 377

Query: 169 ---------PGPQGIPGDEGKRGPKGDMGYPGRIGLD-----------GRDGLPGEPGLD 208
                    PG  G+PG  G RGP G  G PG  G+D           G DG PG  G  
Sbjct: 378 DGVQGAKGLPGHNGLPGPVGPRGPVGAPGMPGMPGIDGMPGYTEKGDRGEDGYPGFAGEP 437

Query: 209 GIPGRNGMDGIPGKDGLPGKD--GIPGTNGTNGEKG 242
           G+PG +G  G PG+DGLPG D  G PG +G +G  G
Sbjct: 438 GLPGESGDCGYPGEDGLPGYDIQGPPGLDGQSGRDG 473



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 39/213 (18%)

Query: 102 FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG--K 159
               T E  P G QG  G +G  G  G  G+ G  G +G  G  G PG  GI G  G  +
Sbjct: 362 LGEGTGEPGPRGAQGFDGVQGAKGLPGHNGLPGPVGPRGPVGAPGMPGMPGIDGMPGYTE 421

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD-----GLPGEPGLDGIP--- 211
           +G +G+ GYPG  G PG  G+    GD GYPG  GL G D     GL G+ G DG P   
Sbjct: 422 KGDRGEDGYPGFAGEPGLPGE---SGDCGYPGEDGLPGYDIQGPPGLDGQSGRDGYPRNS 478

Query: 212 -------------------GRNGMDGIPGKDGLP---GKDGIPGTN----GTNGEKGMTG 245
                              GR+G  GIPG  G P   G+ G PGT     G  G  G+ G
Sbjct: 479 RRYRRSGLFRREGFPGTGSGRDGYPGIPGDIGDPGYSGEKGFPGTGVNKVGPPGMTGLPG 538

Query: 246 PRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
             G  G+ GI+G PG P     + + C   P+ 
Sbjct: 539 EPGMPGRIGIDGYPGPPGNNGERGDDCGYCPDG 571



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 97/245 (39%), Gaps = 96/245 (39%)

Query: 113 GLQGPIGQKGEIGAKGEMGV-----------KGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
           GL GP+G +G +GA G  G+           KG+RGE G PG  G PG   +PG+ G  G
Sbjct: 391 GLPGPVGPRGPVGAPGMPGMPGIDGMPGYTEKGDRGEDGYPGFAGEPG---LPGESGDCG 447

Query: 162 PKGDMGYPG------------------PQ---------------------------GIPG 176
             G+ G PG                  P+                           GIPG
Sbjct: 448 YPGEDGLPGYDIQGPPGLDGQSGRDGYPRNSRRYRRSGLFRREGFPGTGSGRDGYPGIPG 507

Query: 177 DEGKRGPKGDMGYPG----RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---------- 222
           D G  G  G+ G+PG    ++G  G  GLPGEPG+   PGR G+DG PG           
Sbjct: 508 DIGDPGYSGEKGFPGTGVNKVGPPGMTGLPGEPGM---PGRIGIDGYPGPPGNNGERGDD 564

Query: 223 -----DGLPGKDGIPG---------------TNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                DGLPG  G  G                +G  G  G+ G  G  G  G+NG PG P
Sbjct: 565 CGYCPDGLPGNKGDAGYPGMNGYPGPPGPNGEHGDCGMPGLPGKPGTAGADGLNGSPGLP 624

Query: 263 AICAY 267
            I  Y
Sbjct: 625 GIPGY 629



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 79/162 (48%), Gaps = 35/162 (21%)

Query: 131  GVKGERGEKGA--PGVVGPPGPQGIPGDEG------------------KRGPKGDMGYPG 170
            G+ GERGE G   PG+   PGP G PGD G                    G KG+ G PG
Sbjct: 1091 GLNGERGENGDSYPGI---PGPNGQPGDAGYDGLDGVPGPPGYPGITGMPGLKGESGQPG 1147

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLP- 226
               +PG +G  G  G  G  G  G +G  G PG+PG  G  GR    G  G+PG++GLP 
Sbjct: 1148 ---LPGRQGNDGIPGAPGLEGECGDEGFPGAPGQPGYPGQQGREGEKGYPGMPGENGLPG 1204

Query: 227  --GKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G+DG+P   G NG +G+ G  G  G  G  G  G PG+P 
Sbjct: 1205 LRGQDGLPGLKGENGLDGQPGYPGSPGQLGSPGDVGYPGSPG 1246



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 82/187 (43%), Gaps = 38/187 (20%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           QG  G+KGE G  G  G+ G  G  G  G  G PGP G+PG  G  G KG MG     G+
Sbjct: 167 QGRKGEKGESGRSGVPGLPGNSGYPGLKGAKGDPGPYGLPGFPGVSGLKGRMGMR-TSGV 225

Query: 175 PGDEG-------------------------------------KRGPKGDMGYPGRIGLDG 197
            G++G                                     ++G  G +G PG +GLDG
Sbjct: 226 KGEKGLPGPPGPPGPPGSYPWASKPIEMEVLQGPVGPGGVKGEKGRDGPVGPPGMLGLDG 285

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G PG  G  G PG  G  G  GKDG+PG  G  GT G  G  G  G  G +G++G +G
Sbjct: 286 PPGYPGLKGQKGDPGDAGQRGKRGKDGVPGSYGEKGTQGEQGVPGTPGYPGTKGEAGESG 345

Query: 258 VPGTPAI 264
            PG P  
Sbjct: 346 YPGRPGF 352



 Score = 46.2 bits (108), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 86/200 (43%), Gaps = 53/200 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G+ G + ++G  G KGE G  G PG         +PG+ G  G KG  G PGP 
Sbjct: 154 GLSGPPGEGG-VNSQGRKGEKGESGRSGVPG---------LPGNSGYPGLKGAKGDPGPY 203

Query: 173 GIPGDEGKRGPKGDMGYPGRI-GLDGRDGLP----------------------------- 202
           G+PG  G  G KG MG   R  G+ G  GLP                             
Sbjct: 204 GLPGFPGVSGLKGRMGM--RTSGVKGEKGLPGPPGPPGPPGSYPWASKPIEMEVLQGPVG 261

Query: 203 --------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRG 251
                   G  G  G PG  G+DG PG  GL G+ G PG  G  G++   G+ G  G +G
Sbjct: 262 PGGVKGEKGRDGPVGPPGMLGLDGPPGYPGLKGQKGDPGDAGQRGKRGKDGVPGSYGEKG 321

Query: 252 KSGINGVPGTPAICAYKRES 271
             G  GVPGTP     K E+
Sbjct: 322 TQGEQGVPGTPGYPGTKGEA 341



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 77/183 (42%), Gaps = 43/183 (23%)

Query: 101 GFCNSTKEYCPPGLQGP---------IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
           GF         PGL GP          G +G+ G  G  G +G+RG  GAPG  G  G  
Sbjct: 52  GFGGEPGHPGAPGLDGPEGVSGAPGMYGAEGDFGDGGAKGARGDRGLPGAPGHSGLQGLD 111

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPG------------------DEGKRGPKGD-----MG 188
           G+PG +G+ GP G  G     G PG                    G  GP G+      G
Sbjct: 112 GLPGLKGEEGPPGCNGT---DGFPGIPGLAGPPGQPGPNGMPGRHGLSGPPGEGGVNSQG 168

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG--------TNGTNGE 240
             G  G  GR G+PG PG  G PG  G  G PG  GLPG  G+ G        T+G  GE
Sbjct: 169 RKGEKGESGRSGVPGLPGNSGYPGLKGAKGDPGPYGLPGFPGVSGLKGRMGMRTSGVKGE 228

Query: 241 KGM 243
           KG+
Sbjct: 229 KGL 231



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 77/176 (43%), Gaps = 41/176 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
            PG QG  G  G+ G  G  G+ GE G  G PG+ G  G  G+PG EG       RG  G 
Sbjct: 958  PGDQGYPGAPGQDGYPGAPGLNGEDGLVGFPGLRGEHGENGLPGLEGECGEEGSRGQDGL 1017

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             GYPG Q            G  G PG  G DG  GL GEPG  G PG  G  G PG    
Sbjct: 1018 PGYPGEQ------------GQDGLPGLPGADGLPGLNGEPGDSGSPGFRGQPGEPGNLAY 1065

Query: 226  PGK------------------DGIPGTNGTNGEK-----GMTGPRGNRGKSGINGV 258
            PG+                  DG+PG NG  GE      G+ GP G  G +G +G+
Sbjct: 1066 PGQPGDVGYPGPDGPPGLAGPDGLPGLNGERGENGDSYPGIPGPNGQPGDAGYDGL 1121



 Score = 39.3 bits (90), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 82/196 (41%), Gaps = 44/196 (22%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG------------ERGEKGAPGVVGPPGPQGIPGDEGK 159
            PGL G  G  G  G +GE G  G             RG+ G PG  G  G  G+PG  G 
Sbjct: 976  PGLNGEDGLVGFPGLRGEHGENGLPGLEGECGEEGSRGQDGLPGYPGEQGQDGLPGLPGA 1035

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG------------LDGRDGLPGEPGL 207
             G  G  G PG  G PG  G+ G  G++ YPG+ G            L G DGLPG   L
Sbjct: 1036 DGLPGLNGEPGDSGSPGFRGQPGEPGNLAYPGQPGDVGYPGPDGPPGLAGPDGLPG---L 1092

Query: 208  DGIPGRNG--MDGIPGKDGLPGKDG---------------IPGTNGTNGEKGMTGPRGNR 250
            +G  G NG    GIPG +G PG  G               I G  G  GE G  G  G +
Sbjct: 1093 NGERGENGDSYPGIPGPNGQPGDAGYDGLDGVPGPPGYPGITGMPGLKGESGQPGLPGRQ 1152

Query: 251  GKSGINGVPGTPAICA 266
            G  GI G PG    C 
Sbjct: 1153 GNDGIPGAPGLEGECG 1168


>gi|3510536|gb|AAC33528.1| collagen type IX alpha I chain, short form [Homo sapiens]
          Length = 678

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/195 (43%), Positives = 107/195 (54%), Gaps = 36/195 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKG---------ERGEKG 140
           L  M+G   +  E   PG QG  G++G      E+GA+G  G +G         ++GEKG
Sbjct: 182 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 241

Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+RGP      KGD G  G +GIPG  G   PKGD G PG
Sbjct: 242 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG---PKGDTGLPG 298

Query: 192 RIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              +DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  G
Sbjct: 299 ---VDGRDGIPGMPGTKGEPGKPGPPGDAGLHGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 246 PRGNRGKSGINGVPG 260
             GN GK G  G PG
Sbjct: 356 QMGNSGKPGQQGPPG 370



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA G+ G P            GPKGD G
Sbjct: 248 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP------------GPKGDTG 295

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 296 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLHGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 356 QMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPG 397



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 234

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 235 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 289



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 71/134 (52%), Gaps = 6/134 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  GD G  
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEK 240

Query: 191 GRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ G+    
Sbjct: 241 GARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLP--- 297

Query: 248 GNRGKSGINGVPGT 261
           G  G+ GI G+PGT
Sbjct: 298 GVDGRDGIPGMPGT 311



 Score = 40.0 bits (92), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 39/62 (62%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G KG  GEKG+ G  G PG  G  G  G++GP G++G  GP+G+PG  G+ GP G  G P
Sbjct: 337 GAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLP 396

Query: 191 GR 192
           G+
Sbjct: 397 GK 398


>gi|200215|gb|AAA68100.1| pro-alpha-1 type II collagen [Mus musculus]
          Length = 1459

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/181 (42%), Positives = 90/181 (49%), Gaps = 30/181 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           P G  GP G  G+ GAKG+ G  G++G+ GAPG  GP   PGPQG  G  G +G +G  G
Sbjct: 804 PAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQG 863

Query: 168 YPGPQGIPGDEG---------------------KRGPKG---DMGYPGRI---GLDGRDG 200
            PG  G PG  G                     K GPKG   D G PGR    GL+G  G
Sbjct: 864 PPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLEGPAG 923

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGE G  G  G +G+DG PG  GL G+ GI G  G  GE+G  G  G  G+ G  G PG
Sbjct: 924 APGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 983

Query: 261 T 261
            
Sbjct: 984 A 984



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 88/189 (46%), Gaps = 39/189 (20%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 660 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPG 719

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G R               G KG+ G
Sbjct: 720 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEAG 779

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG  G  G  G PGEPG  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G
Sbjct: 780 PPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 839

Query: 249 NRGKSGING 257
             G  G  G
Sbjct: 840 PSGAPGPQG 848



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 86/196 (43%), Gaps = 48/196 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  GA+G  G  GE G  G  G  GPPG  G PG   D+G+ G KGD G P
Sbjct: 776 GEAGPPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAP 835

Query: 170 GPQG---IPGDEG------------KRGPKGDMGYPGRIGL------------------- 195
           GPQG    PG +G             +GP G  G+PG  G                    
Sbjct: 836 GPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPA 895

Query: 196 -----------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                       G  G  G+PGL+G  G  G  G PG DG  G DG PG  G  G++G+ 
Sbjct: 896 GKDGPKGVRGDSGPPGRAGDPGLEGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIV 955

Query: 245 GPRGNRGKSGINGVPG 260
           G  G RG+ G  G+PG
Sbjct: 956 GLPGQRGERGFPGLPG 971



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 88/190 (46%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPK--------- 163
           GP+G KG+ G  G  G KG++G KG     GP GPQG P   G+EGKRG +         
Sbjct: 419 GPLGPKGQAGEPGIAGFKGDQGPKG---ETGPAGPQGAPGPAGEEGKRGARGEPGGAGPI 475

Query: 164 ---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMD 217
              G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ 
Sbjct: 476 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLT 535

Query: 218 GIPG---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG                             G PG  G PG  G NGE G  G +G  
Sbjct: 536 GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLA 595

Query: 251 GKSGINGVPG 260
           G  G+ G+PG
Sbjct: 596 GAPGLRGLPG 605



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 87/209 (41%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGK------------- 159
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG +G              
Sbjct: 347 GEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 406

Query: 160 --------------------------------RGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                           +GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 407 GPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGEEGKRGAR 466

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 467 GEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 523

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 524 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 552



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 88/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 823  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGA 882

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G+ GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 883  NGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLEGPAGAPGEKGEPGDDGPSGLDGP 942

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 943  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1002

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1003 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1033



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 97/240 (40%), Gaps = 75/240 (31%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 720 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEAG 779

Query: 141 APGV---------------VGPPGPQGIP------------GDEGKRGPKGDMGYPGPQG 173
            PG                 GPPGP G              GD+G+ G KGD G PGPQG
Sbjct: 780 PPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 839

Query: 174 IPGDEGKRGP---------KGDMGYPGRIGLDG------------------------RDG 200
             G  G +GP         +G  G PG  G  G                        +DG
Sbjct: 840 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDG 899

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ GI G+PG
Sbjct: 900 PKGVRGDSGPPGRAGDPGLEGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPG 959



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 88/209 (42%), Gaps = 60/209 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 494 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 553

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM- 216
                         +G PG  G  GPKG  G PG+ G     GL G PGL G+PG++G  
Sbjct: 554 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAG---EKGLAGAPGLRGLPGKDGET 610

Query: 217 -----------------DGIPGKD---------------------GLPGKDGIPGTNGTN 238
                             G PG                       G+PG+ G PG  G  
Sbjct: 611 GAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPR 670

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAI 264
           GE+G  G RG+ G  G+    G+PGTP  
Sbjct: 671 GERGFPGERGSPGAQGLQGPRGLPGTPGT 699



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 75/169 (44%), Gaps = 36/169 (21%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 722 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 775

Query: 164 GDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G+ G PGP      +G PG+ G+ GP G  G+ G  G DG+ G  G+          G  
Sbjct: 776 GEAGPPGPSGSTGARGAPGEPGETGPPGPAGFAGPPGADGQPGAKGD---------QGEA 826

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G  G  G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 827 GQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 875



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 89/223 (39%), Gaps = 72/223 (32%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------------VGPPGP- 150
           G  GP G  GE G  GE G+ G  G +G PG                       G PGP 
Sbjct: 575 GFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQGAPGPS 634

Query: 151 --------------------QGIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDM 187
                               QGIPG+ G  G   P+G+ G+PG +G PG +G +GP+G  
Sbjct: 635 GFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLP 694

Query: 188 GYPGRIGLDGR---------------DGLPGEPGLDGIPGRNGMDG---IPGKDGLPGKD 229
           G PG  G  G                 G+PGE G  GI G  G  G     G +G PGKD
Sbjct: 695 GTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKD 754

Query: 230 GIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G           G NGEKG  GP G  G +G  G PG P 
Sbjct: 755 GGRGLTGPIGPPGPAGANGEKGEAGPPGPSGSTGARGAPGEPG 797



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 80/189 (42%), Gaps = 54/189 (28%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKG 164
            PPG  G  G +G  GA GE   KGE G+ G  G+ GPPGPQG+ G  G      +RG +G
Sbjct: 909  PPGRAGDPGLEGPAGAPGE---KGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERG 965

Query: 165  DMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDG 209
              G PGP G PG +G  G  GD                G PGR G          PG DG
Sbjct: 966  FPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADG 1016

Query: 210  IPGRNGMDGIPGKDG---------------------LPGKDGIPGTNGTNGEKGMTGPRG 248
             PGR+G  G+ G  G                       GK G  G  G  G  G +GP G
Sbjct: 1017 PPGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAG 1076

Query: 249  NRGKSGING 257
             RG +G  G
Sbjct: 1077 ARGIAGPQG 1085



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 75/189 (39%), Gaps = 57/189 (30%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G       +G PG+ G  GP G  G PG  GIPG +G       
Sbjct: 346 KGEAGPTGARGPEGAQGS------RGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 399

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GE    G  G PG  G 
Sbjct: 400 AGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGE 459

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 460 EGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 519

Query: 256 NGVPGTPAI 264
            G PG P +
Sbjct: 520 PGRPGEPGL 528



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 79/223 (35%), Gaps = 81/223 (36%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG---------EKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GP+G +G  G  G  GVKG RG         E GAPGV G     G PG+ G  GP 
Sbjct: 239 GLPGPMGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGE---SGSPGENGSPGPM 295

Query: 164 GDMGYPG------------------------------------------PQGIPGDEGKR 181
           G  G PG                                           +G  G  G R
Sbjct: 296 GPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGAR 355

Query: 182 GP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG----------------- 221
           GP   +G  G PG  G  G  G  G PG DGIPG  G  G PG                 
Sbjct: 356 GPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ 415

Query: 222 -------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                    G  G+ GI G  G  G KG TGP G +G  G  G
Sbjct: 416 GATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAG 458



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 83/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 256 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 315

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +G +G+ G PG  G 
Sbjct: 316 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGP 375

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 376 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGI 432

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 433 AGFKGDQGPKGETGPAGPQGAPG-PAGEEGKR 463



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 3/70 (4%)

Query: 173 GIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG  G+RG   P G  G+PG  GL G  G  G PGLDG  G  G  G+ G+ G PG++
Sbjct: 230 GKPGKSGERGLPGPMGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN 289

Query: 230 GIPGTNGTNG 239
           G PG  G  G
Sbjct: 290 GSPGPMGPRG 299


>gi|345786504|ref|XP_542078.3| PREDICTED: collagen alpha-3(V) chain [Canis lupus familiaris]
          Length = 1749

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 86/155 (55%), Gaps = 12/155 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGP---QGIPGDEGKRGPKGD 165
            PG +GP+G  G IG  G+ G +G     GEKG+PG  GPPGP    GIPG  G RGP G 
Sbjct: 1011 PGERGPVGPAGGIGLPGQSGGQGPVGPAGEKGSPGERGPPGPTGKDGIPGPLGLRGPPGA 1070

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G  G        G PG++G +G KGD G PG  G+ G  G PG PG DG  GR G  G+
Sbjct: 1071 VGPSGEDGDKGEVGAPGNKGSKGDKGDAGPPGPTGVRGPVGHPGSPGADGAQGRRGPPGL 1130

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G+ G  G  G  G  G  G +G+ GP G +G+ G
Sbjct: 1131 FGQKGDDGVRGFAGVIGPPGLQGLPGPPGEKGEVG 1165



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 21/188 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVGPPGPQGIPGD 156
            PG  GPIG KG+ G  G +G  G  GE+G                 G VGP G +G PG+
Sbjct: 987  PGDPGPIGLKGDKGPLGPVGANGSPGERGPVGPAGGIGLPGQSGGQGPVGPAGEKGSPGE 1046

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G  GP G  G PGP G+ G  G  GP      KG++G PG  G  G  G  G PG  G+
Sbjct: 1047 RGPPGPTGKDGIPGPLGLRGPPGAVGPSGEDGDKGEVGAPGNKGSKGDKGDAGPPGPTGV 1106

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G  G  G PG DG  G+ G PG  G  G+ G+ G  G  G  G+ G+PG P       +
Sbjct: 1107 RGPVGHPGSPGADGAQGRRGPPGLFGQKGDDGVRGFAGVIGPPGLQGLPGPPGEKGEVGD 1166

Query: 271  SCSLLPNS 278
              S+ P+ 
Sbjct: 1167 VGSMGPHG 1174



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 77/145 (53%), Gaps = 15/145 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------GPQGIPGDEGKR 160
           G  GP+G  G  G KGEMG  G +G +G  G +GPP            G +G+PGD    
Sbjct: 490 GRPGPVGLPGYPGQKGEMGDIGPQGPRGLQGPLGPPGREGKMGRSGADGARGLPGDT--- 546

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GPKGD G+ G  G+PG++G+RG  G +G PG  G DG+ G  G PG  G  G  G  G+ 
Sbjct: 547 GPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGKKGAEGPPGPTGQAGEPGPRGLI 606

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTG 245
           G  G PG  G PG  G +G  G  G
Sbjct: 607 GPRGSPGPLGRPGVVGIDGAPGAKG 631



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 74/158 (46%), Gaps = 15/158 (9%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V   G   S  E  PPG  G  G  G +G +G  G  G  GE G  G VG PG +G  GD
Sbjct: 1035 VGPAGEKGSPGERGPPGPTGKDGIPGPLGLRGPPGAVGPSGEDGDKGEVGAPGNKGSKGD 1094

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
                  KGD G PGP G+         +G +G+PG  G DG  G  G PGL G  G +G+
Sbjct: 1095 ------KGDAGPPGPTGV---------RGPVGHPGSPGADGAQGRRGPPGLFGQKGDDGV 1139

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  G PG  G+PG  G  GE G  G  G  G  G
Sbjct: 1140 RGFAGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPG 1177



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 81/166 (48%), Gaps = 33/166 (19%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG+ G  GE G  G  GEKG  GV       G+PG  G+ GPKG  G+PGP G  G++
Sbjct: 766 GLKGQEGLAGEEGPPGSAGEKGKLGV------PGLPGYPGRPGPKGSTGFPGPLGPLGEK 819

Query: 179 GKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP------ 226
           GKRG       +G+ G PG  G  G+ G  G+PG  G  G++G  GIPG+ GLP      
Sbjct: 820 GKRGKAGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAAGIPGEKGLPGLQGPP 879

Query: 227 ---------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                          G+ G PG  G  G +G TGP G  G  G  G
Sbjct: 880 GFPGPKGPPGPQGKDGRPGHPGQRGELGFQGQTGPPGPAGVVGPQG 925



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 73/153 (47%), Gaps = 21/153 (13%)

Query: 137  GEKGAPGVVGPPGPQG---------------IPGDEGKRGPKGDMGYPGP---QGIPGDE 178
            G +G  G +GPPGP G                PGD G  G KGD G  GP    G PG+ 
Sbjct: 955  GREGIKGDLGPPGPLGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPLGPVGANGSPGER 1014

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            G  GP G +G PG+ G  G  G  GE   PG  G PG  G DGIPG  GL G  G  G +
Sbjct: 1015 GPVGPAGGIGLPGQSGGQGPVGPAGEKGSPGERGPPGPTGKDGIPGPLGLRGPPGAVGPS 1074

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G +G+KG  G  GN+G  G  G  G P     +
Sbjct: 1075 GEDGDKGEVGAPGNKGSKGDKGDAGPPGPTGVR 1107



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 80/155 (51%), Gaps = 18/155 (11%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------GIPGDEGKRGPKGDMGY 168
           KG  G +G  G KGE+GE G PG  G  GP+            G  G EG +G +G  G 
Sbjct: 717 KGTSGNRGLQGEKGEQGEDGFPGFKGDGGPKGDRGHPGPPGPRGEDGPEGLKGQEGLAGE 776

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            GP G  G++GK G  G  GYPGR G  G  G PG  G  G  G+ G  G P   GL G+
Sbjct: 777 EGPPGSAGEKGKLGVPGLPGYPGRPGPKGSTGFPGPLGPLGEKGKRGKAGQP---GLEGE 833

Query: 229 DGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPG 260
            G PG+ G  G+ G T   GP+G+ G+ G  G+PG
Sbjct: 834 RGPPGSRGERGQPGATGQPGPKGDVGQDGAAGIPG 868



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 83/196 (42%), Gaps = 57/196 (29%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------------------- 156
            G+ G  G +GE+G +G+ G  G  GVVGP   QG  G+                      
Sbjct: 895  GRPGHPGQRGELGFQGQTGPPGPAGVVGP---QGKTGEAGPLGERGPPGPPGPPGEQGLP 951

Query: 157  --EGKRGPKGDMGYPGPQG---------------IPGDEGKRGPKGDMGYPGRIGLDGRD 199
              EG+ G KGD+G PGP G                PGD G  G KGD G  G +G +G  
Sbjct: 952  GLEGREGIKGDLGPPGPLGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPLGPVGANGSP 1011

Query: 200  ------------GLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMT 244
                        GLPG+ G  G  G  G  G PG+ G P   GKDGIPG  G  G  G  
Sbjct: 1012 GERGPVGPAGGIGLPGQSGGQGPVGPAGEKGSPGERGPPGPTGKDGIPGPLGLRGPPGAV 1071

Query: 245  GPRGNRGKSGINGVPG 260
            GP G  G  G  G PG
Sbjct: 1072 GPSGEDGDKGEVGAPG 1087



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 77/166 (46%), Gaps = 30/166 (18%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAK---GEMGVKGERGEKGAPGVVGPPGPQGI 153
           +  QG         PPG +G +G+ G  GA+   G+ G KG+RG  G P         G+
Sbjct: 510 IGPQGPRGLQGPLGPPGREGKMGRSGADGARGLPGDTGPKGDRGFDGLP---------GL 560

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG++G+RG  G +G PGP G  G +G  GP G  G  G  G  G  G  G PG  G PG 
Sbjct: 561 PGEKGQRGDFGHVGQPGPPGEDGKKGAEGPPGPTGQAGEPGPRGLIGPRGSPGPLGRPGV 620

Query: 214 NGMDGIPGKDG---------------LPGKDGIPGTN---GTNGEK 241
            G+DG PG  G                PG  G+PG     GT GEK
Sbjct: 621 VGIDGAPGAKGNVGPPGEPGPPGQQGNPGSQGLPGPQGPIGTPGEK 666



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 73/162 (45%), Gaps = 36/162 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G +G  G  G  G KG+RG+ G  G  GPPG  G  G EG  GP G  G PGP
Sbjct: 543 PGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGKKGAEGPPGPTGQAGEPGP 602

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------------EPGLDGIPGRNGM 216
           +G+ G  G  GP   +G PG +G+DG  G  G                PG  G+PG  G 
Sbjct: 603 RGLIGPRGSPGP---LGRPGVVGIDGAPGAKGNVGPPGEPGPPGQQGNPGSQGLPGPQGP 659

Query: 217 DGIPGK---------------DGLPGKDGIPGTNGTNGEKGM 243
            G PG+               DG PG    PG  G  GEKG 
Sbjct: 660 IGTPGEKGPPGNPGIPGVPGSDGPPGH---PGHEGPTGEKGA 698



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 18/159 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
           GL G  G  G  G KG++GV G  G  G PG  G    PGP G  G++GKRG  G  G  
Sbjct: 772 GLAGEEGPPGSAGEKGKLGVPGLPGYPGRPGPKGSTGFPGPLGPLGEKGKRGKAGQPGLE 831

Query: 170 GPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGL------------DGIPGRN 214
           G +G PG  G+RG  G  G PG    +G DG  G+PGE GL             G PG  
Sbjct: 832 GERGPPGSRGERGQPGATGQPGPKGDVGQDGAAGIPGEKGLPGLQGPPGFPGPKGPPGPQ 891

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G DG PG  G  G+ G  G  G  G  G+ GP+G  G++
Sbjct: 892 GKDGRPGHPGQRGELGFQGQTGPPGPAGVVGPQGKTGEA 930



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 83/179 (46%), Gaps = 42/179 (23%)

Query: 112 PGLQGPIGQKGEI------------------GAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           PG +GP G+KG                    G  G  G++GE+GE+G           G 
Sbjct: 687 PGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEQGE---------DGF 737

Query: 154 PGDEGKRGPKGDMGYPGP---------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           PG +G  GPKGD G+PGP         +G+ G EG     G+ G PG  G  G+ G+PG 
Sbjct: 738 PGFKGDGGPKGDRGHPGPPGPRGEDGPEGLKGQEGL---AGEEGPPGSAGEKGKLGVPGL 794

Query: 205 PGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G PG  G  G PG  G     GK G  G  G  GE+G  G RG RG+ G  G PG
Sbjct: 795 PGYPGRPGPKGSTGFPGPLGPLGEKGKRGKAGQPGLEGERGPPGSRGERGQPGATGQPG 853



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 6/68 (8%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP+G+KG+ G  G+ G++GERG  G+ G       +G PG  G+ GPKGD+G  G 
Sbjct: 810 PGPLGPLGEKGKRGKAGQPGLEGERGPPGSRGE------RGQPGATGQPGPKGDVGQDGA 863

Query: 172 QGIPGDEG 179
            GIPG++G
Sbjct: 864 AGIPGEKG 871



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 89/244 (36%), Gaps = 99/244 (40%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG----P--------------------P 148
           G  GP GQ GE G +G +G +G  G  G PGVVG    P                    P
Sbjct: 589 GPPGPTGQAGEPGPRGLIGPRGSPGPLGRPGVVGIDGAPGAKGNVGPPGEPGPPGQQGNP 648

Query: 149 GPQGIPGDEG---------------------KRGPKGDMGYPGPQGIPGD---------- 177
           G QG+PG +G                       GP G  G+ GP G  G           
Sbjct: 649 GSQGLPGPQGPIGTPGEKGPPGNPGIPGVPGSDGPPGHPGHEGPTGEKGAQGPPGSAGPP 708

Query: 178 -----------------EGKRGPKGDMGYPG------------------------RIGLD 196
                            +G++G +G+ G+PG                          GL 
Sbjct: 709 GYPGPRGVKGTSGNRGLQGEKGEQGEDGFPGFKGDGGPKGDRGHPGPPGPRGEDGPEGLK 768

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G++GL GE G  G  G  G  G+P   GLPG  G PG  G+ G  G  GP G +GK G  
Sbjct: 769 GQEGLAGEEGPPGSAGEKGKLGVP---GLPGYPGRPGPKGSTGFPGPLGPLGEKGKRGKA 825

Query: 257 GVPG 260
           G PG
Sbjct: 826 GQPG 829


>gi|344270374|ref|XP_003407020.1| PREDICTED: collagen alpha-2(I) chain-like [Loxodonta africana]
          Length = 1679

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/191 (40%), Positives = 93/191 (48%), Gaps = 30/191 (15%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
             + G   S     P G++GP G  G     GE GV G RG  G+PG VGP G   P G+
Sbjct: 727 AGVMGPPGSRGASGPAGVRGPSGDSGR---PGEPGVMGPRGLPGSPGNVGPAGKEGPAGL 783

Query: 154 PGDEGKRGP---------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGL 201
           PG +G+ GP          G++G+PGP+G  GD GK G KG  G  G  G    DG +G 
Sbjct: 784 PGIDGRPGPIGPAGARGEPGNIGFPGPKGPAGDPGKNGDKGHAGLAGPRGAPGPDGNNGA 843

Query: 202 PGEPGLDGI---PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRGN 249
            G PGL G+    G  G  G PG  GLPG  G  G  G  GE+G+          GPRG 
Sbjct: 844 QGPPGLQGVQGGKGEQGPAGPPGFQGLPGPSGTAGEAGKPGERGIPGEFGLPGPAGPRGE 903

Query: 250 RGKSGINGVPG 260
           RG  G +G  G
Sbjct: 904 RGPPGQSGAAG 914



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 91/190 (47%), Gaps = 27/190 (14%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           ++  +G   S     P G +GP G  G  G  G +G  G RGE G  G  GP GP    G
Sbjct: 759 VMGPRGLPGSPGNVGPAGKEGPAGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPA---G 815

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D GK G KG  G  GP+G PG +G  G +G  G  G  G  G  G  G PG  G+PG +G
Sbjct: 816 DPGKNGDKGHAGLAGPRGAPGPDGNNGAQGPPGLQGVQGGKGEQGPAGPPGFQGLPGPSG 875

Query: 216 M---DGIPGKDGLPGKDGIPGTNGTNGEK---------GMTGP------------RGNRG 251
                G PG+ G+PG+ G+PG  G  GE+         G TGP             GN+G
Sbjct: 876 TAGEAGKPGERGIPGEFGLPGPAGPRGERGPPGQSGAAGPTGPIGSRGPSGPPGPDGNKG 935

Query: 252 KSGINGVPGT 261
           + G+ G PGT
Sbjct: 936 EPGVVGAPGT 945



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 76/152 (50%), Gaps = 6/152 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ GP G +G  G  G  G  G+ G  G PGV+GP   +G+PG  G  GP G  G  G  
Sbjct: 728 GVMGPPGSRGASGPAGVRGPSGDSGRPGEPGVMGP---RGLPGSPGNVGPAGKEGPAGLP 784

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKD 229
           GI G  G  GP G  G PG IG  G  G  G+PG +G  G  G+    G PG DG  G  
Sbjct: 785 GIDGRPGPIGPAGARGEPGNIGFPGPKGPAGDPGKNGDKGHAGLAGPRGAPGPDGNNGAQ 844

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G PG  G  G KG  GP G  G  G+ G  GT
Sbjct: 845 GPPGLQGVQGGKGEQGPAGPPGFQGLPGPSGT 876



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 84/197 (42%), Gaps = 51/197 (25%)

Query: 113 GLQGPIGQKGEIGAKGEM---------------GVKGERGEKGAP--------------- 142
           G  GP G KGE G+KGE                G +G  GE G+                
Sbjct: 659 GEPGPAGSKGESGSKGEPGSAGPQGPPGPSGEEGKRGSSGEAGSAGPAGPPGLRGGPGSR 718

Query: 143 ---------GVVGPPGPQGIPGDEGKRGPKGDMGYPG------PQGIPGDEGKRGPKGDM 187
                    GV+GPPG +G  G  G RGP GD G PG      P+G+PG  G  GP G  
Sbjct: 719 GLPGADGRAGVMGPPGSRGASGPAGVRGPSGDSGRPGEPGVMGPRGLPGSPGNVGPAGKE 778

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  G  G+DGR G  G  G  G PG  G  G  G  G PGK      NG  G  G+ GPR
Sbjct: 779 GPAGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPAGDPGK------NGDKGHAGLAGPR 832

Query: 248 GNRGKSGINGVPGTPAI 264
           G  G  G NG  G P +
Sbjct: 833 GAPGPDGNNGAQGPPGL 849



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 88/165 (53%), Gaps = 18/165 (10%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGVVGPPGPQGIPGDEG 158
            P G QGP+G+ GE GA G  G  GE+G  G              G++GPPG  G+PG  G
Sbjct: 1134 PRGDQGPVGRTGETGASGPPGFAGEKGSSGEPGTAGPPGTPGPQGILGPPGILGLPGSRG 1193

Query: 159  KRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            +RG     G +G PGP GI G  G RGP G +G PG  G  G  G  G PG DG PGR+G
Sbjct: 1194 ERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDG 1253

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGING 257
            + G  G+ G PG  G  GT G  G +G  GP    GNRG+ G  G
Sbjct: 1254 LPGHKGERGYPGNAGPVGTAGAPGPQGPLGPAGKHGNRGEPGPAG 1298



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 74/149 (49%), Gaps = 3/149 (2%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG---DMGY 168
            PG  G  G  G  G  G  G+ G +GE+G PG  GP G  G PG +G  GP G   + G 
Sbjct: 1234 PGEAGRDGNPGSDGPPGRDGLPGHKGERGYPGNAGPVGTAGAPGPQGPLGPAGKHGNRGE 1293

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PGP G  G  G  GP+G  G  G  G  G  G  G  GL G  G NG+ G+PG  G  G 
Sbjct: 1294 PGPAGSVGPVGAVGPRGPSGPQGARGDKGEAGDKGPRGLPGFKGHNGLQGLPGLAGQHGD 1353

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G PG+ G  G +G  GP G  GK G  G
Sbjct: 1354 QGSPGSVGPAGPRGPAGPSGPVGKDGRPG 1382



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 84/193 (43%), Gaps = 33/193 (17%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGE---------------IGAKGEMGVKGERGEKGAPGV- 144
            G    T    PPG  G  G  GE               +G  G +G+ G RGE+G PGV 
Sbjct: 1142 GRTGETGASGPPGFAGEKGSSGEPGTAGPPGTPGPQGILGPPGILGLPGSRGERGLPGVA 1201

Query: 145  --VGPPGPQGI---------------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
              VG PGP GI               PG  G  G  G  G PG  G PG +G  G KG+ 
Sbjct: 1202 GAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGLPGHKGER 1261

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            GYPG  G  G  G PG  G  G  G++G  G PG  G  G  G  G  G +G +G  G +
Sbjct: 1262 GYPGNAGPVGTAGAPGPQGPLGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGARGDK 1321

Query: 248  GNRGKSGINGVPG 260
            G  G  G  G+PG
Sbjct: 1322 GEAGDKGPRGLPG 1334



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 81/183 (44%), Gaps = 36/183 (19%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPGLQG  G KGE G  G  G +G  G  G  G  G PG +GIPG+ G  GP G  G  G
Sbjct: 846  PPGLQGVQGGKGEQGPAGPPGFQGLPGPSGTAGEAGKPGERGIPGEFGLPGPAGPRGERG 905

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------------RNGMDG 218
            P   PG  G  GP G +G  G  G  G DG  GEPG+ G PG              G  G
Sbjct: 906  P---PGQSGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAPGTAGPSGPGGLPGERGAAG 962

Query: 219  IP---------------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            IP                     G  G PG  G PG  G  G++G  GP G+ G +G  G
Sbjct: 963  IPGGKGEKGETGLRGDTGNTGRDGARGAPGAVGAPGPAGATGDRGEAGPAGSAGPAGPRG 1022

Query: 258  VPG 260
             PG
Sbjct: 1023 SPG 1025



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 56/106 (52%), Gaps = 9/106 (8%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GP G  G  G  G  G+ G+PG  G PG+ G  GP+G  G+PG  GL         PG  
Sbjct: 440 GPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGL---------PGFK 490

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           GI G NG+DG+ G+ G PG  G PG  G NG  G  G RG  G+ G
Sbjct: 491 GIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQIGARGLPGERG 536



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 67/139 (48%), Gaps = 9/139 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP+G  G  G +G +G  G+ G +G PG  G  GP G     G RGP       GP
Sbjct: 1264 PGNAGPVGTAGAPGPQGPLGPAGKHGNRGEPGPAGSVGPVGA---VGPRGPS------GP 1314

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            QG  GD+G+ G KG  G PG  G +G  GLPG  G  G  G  G  G  G  G  G  G 
Sbjct: 1315 QGARGDKGEAGDKGPRGLPGFKGHNGLQGLPGLAGQHGDQGSPGSVGPAGPRGPAGPSGP 1374

Query: 232  PGTNGTNGEKGMTGPRGNR 250
             G +G  G  G  GP G R
Sbjct: 1375 VGKDGRPGHAGAVGPAGVR 1393



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 6/105 (5%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           Q G  G++G  G  G+ GE G PG        G PG+ G  GP+G  G+PG  G+PG +G
Sbjct: 438 QTGPAGSRGPAGPPGKAGEDGHPGK------PGRPGERGVVGPQGARGFPGTPGLPGFKG 491

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            RG  G  G  G+ G  G  G PG PG +G PG+ G  G+PG+ G
Sbjct: 492 IRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQIGARGLPGERG 536



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 46/85 (54%)

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G  G +G  G PG+ G DG  G PG PG  G+ G  G  G PG  GLPG  GI G NG +
Sbjct: 440 GPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLD 499

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPA 263
           G KG  G  G +G+ G  G  GTP 
Sbjct: 500 GLKGQPGAPGVKGEPGAPGENGTPG 524



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 37/59 (62%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
            +G+ G  G  G +GAPG VG PGP G  GD G+ GP G  G  GP+G PG+ G+ GP G
Sbjct: 976  RGDTGNTGRDGARGAPGAVGAPGPAGATGDRGEAGPAGSAGPAGPRGSPGERGEVGPAG 1034



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 48/91 (52%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G  G  GA+G+ G  G++G +G PG  G  G QG+PG  G+ G +G  G  G
Sbjct: 1302 PVGAVGPRGPSGPQGARGDKGEAGDKGPRGLPGFKGHNGLQGLPGLAGQHGDQGSPGSVG 1361

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            P G  G  G  GP G  G PG  G  G  G+
Sbjct: 1362 PAGPRGPAGPSGPVGKDGRPGHAGAVGPAGV 1392



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 52/104 (50%), Gaps = 9/104 (8%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G   S     PPG  G  G  G+ G  GE GV G +G +G PG  G PG +GI G  G  
Sbjct: 440 GPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLD 499

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           G KG  G PG +G PG        G+ G PG+IG     GLPGE
Sbjct: 500 GLKGQPGAPGVKGEPGA------PGENGTPGQIGA---RGLPGE 534



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 30/52 (57%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            G  G  G  G +GA G  G  G+RGE G  G  GP GP+G PG+ G+ GP G
Sbjct: 983  GRDGARGAPGAVGAPGPAGATGDRGEAGPAGSAGPAGPRGSPGERGEVGPAG 1034



 Score = 40.0 bits (92), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 84/269 (31%), Gaps = 117/269 (43%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------------------QGI 153
            PG  G  G +GE G  G  G  G RG  G  G VGP GP                  +G 
Sbjct: 997  PGPAGATGDRGEAGPAGSAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQAGAKGERGT 1056

Query: 154  PGDEGKRGP------------------------KGDMGYPGPQGIPG------------- 176
             G +G+ GP                        +GD G PG  G PG             
Sbjct: 1057 KGPKGENGPVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGATGFPGAAGRTGPPGPAGI 1116

Query: 177  -----------DEGKRGPKGDMGYPGRIGLDGRDGLPG---------------------- 203
                        EG RGP+GD G  GR G  G  G PG                      
Sbjct: 1117 TGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGASGPPGFAGEKGSSGEPGTAGPPGTPGP 1176

Query: 204  -----EPGLDGIPGRNGMDGIPGKDGL------------------------PGKDGIPGT 234
                  PG+ G+PG  G  G+PG  G                         PG +G PG 
Sbjct: 1177 QGILGPPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGE 1236

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G +G  G  GP G  G  G  G  G P 
Sbjct: 1237 AGRDGNPGSDGPPGRDGLPGHKGERGYPG 1265



 Score = 39.7 bits (91), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 83/238 (34%), Gaps = 90/238 (37%)

Query: 116 GPIGQKGEIGAK---------------------GEMGVKGERGEKGAPGVV--------- 145
           GP+G  G IG+                      G  G  G RGE G PGV          
Sbjct: 554 GPVGPAGPIGSAGPPGFPGAPGPKGEIGPVGNPGPSGPAGPRGEAGLPGVSGPVGPPGNP 613

Query: 146 ---------------------GPPGPQGIPGD------------EGKRGPKGDMGYPGPQ 172
                                G PGP+GIPG              G+ GP G  G  G +
Sbjct: 614 GANGLAGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGSK 673

Query: 173 G------------IPGDEGKRGPKGDMGYP---------------GRIGLDGRDGLPGEP 205
           G              G+EGKRG  G+ G                 G  G DGR G+ G P
Sbjct: 674 GEPGSAGPQGPPGPSGEEGKRGSSGEAGSAGPAGPPGLRGGPGSRGLPGADGRAGVMGPP 733

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G+ G  G  G PG+ G+ G  G  G  G  GP G  G +G+ G+ G P 
Sbjct: 734 GSRGASGPAGVRGPSGDSGRPGEPGVMGPRGLPGSPGNVGPAGKEGPAGLPGIDGRPG 791


>gi|296205055|ref|XP_002749598.1| PREDICTED: collagen alpha-2(V) chain [Callithrix jacchus]
          Length = 1499

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDAGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDAGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 79/144 (54%), Gaps = 18/144 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G +G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 279 GFAGSLGARGFPGAPGLPGLKGHRGHKG---LEGPKGEVGAPGSKGEAGPTGPMGAMGPL 335

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G           G+ G PG  G  GIPG  G PG  
Sbjct: 336 GPRGMPGERGRLGPQ---GAPGQRGAH---------GMPGKPGPMGPLGIPGSSGFPGNP 383

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKS 253
           G+ G  G  G +G  GP+G RG++
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGET 407



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDAGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 88/219 (40%), Gaps = 72/219 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
            G  G+PG   K GP G +G PG  G  G  G+ GE G                      
Sbjct: 356 RGAHGMPG---KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412

Query: 207 -----------LDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
                       DG PG  G  G PG                          G PG  G+
Sbjct: 413 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 472

Query: 232 PGTNGTNGEKGMTGPR---------GNRGKSGINGVPGT 261
           PG  G  G KG  GP          G  GK G  G PGT
Sbjct: 473 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT 511



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 70/164 (42%), Gaps = 51/164 (31%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ GA G +G +GERG   E+G PG+ G PG +G+ G  G  GPKG    PGP G PGD 
Sbjct: 699 GDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKG---SPGPSGTPGDA 755

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G                         PGL G+PG  G+ G PG  G  G  G  G  GT 
Sbjct: 756 GP------------------------PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTA 791

Query: 239 G---------------------EKGMTGPRGNRGKSGINGVPGT 261
           G                     EKG  GPRG  G  G  G PG+
Sbjct: 792 GNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGS 835



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 210 IPGRNG 215
            PG +G
Sbjct: 946 DPGSHG 951



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 71/157 (45%), Gaps = 36/157 (22%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G       PG +
Sbjct: 267 GEPGRNGNPGEVGFAGSLGARGFPGAPGLPGLKGHRGHKGLEGPKGEVG------APGSK 320

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP------------GRNGMDGIPGKD--- 223
           G+ GP G MG  G +G  G            +P            G+ G  G+PGK    
Sbjct: 321 GEAGPTGPMGAMGPLGPRG------------MPGERGRLGPQGAPGQRGAHGMPGKPGPM 368

Query: 224 ---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G+PG  G PG  G  GE G TG RG  G  G  G
Sbjct: 369 GPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRG 405


>gi|426222633|ref|XP_004005491.1| PREDICTED: collagen alpha-4(IV) chain [Ovis aries]
          Length = 1613

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/158 (47%), Positives = 89/158 (56%), Gaps = 6/158 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
           PGLQGP G++G  G  G  G  G   E+GAPG+ G PG  G PG  G    +G +GDMG 
Sbjct: 799 PGLQGPKGREGNAGFPGIPGPPGHSCERGAPGIPGQPGLPGAPGSPGAPGWKGQRGDMGP 858

Query: 169 PGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            GP   +G+PG  G+ G  G  G PG  G  G DGLPG PG  G  G  G  G PG+ G 
Sbjct: 859 LGPAGMKGLPGVPGRPGADGTPGLPGVPGPTGDDGLPGLPGPKGPQGLPGFLGFPGERGK 918

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG+DG PG  G +GEKG  G  G+RG  G+ G  G P 
Sbjct: 919 PGQDGHPGRKGEHGEKGWPGSLGDRGLKGVKGARGPPG 956



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 83/170 (48%), Gaps = 21/170 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGY 168
            PG  G  G  G  G +G+MG  G  G KG PGV G PG  G PG  G  GP GD    G 
Sbjct: 838  PGAPGSPGAPGWKGQRGDMGPLGPAGMKGLPGVPGRPGADGTPGLPGVPGPTGDDGLPGL 897

Query: 169  PGP---QGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-- 220
            PGP   QG+P   G  G+RG  G  G+PGR G  G  G PG  G  G+ G  G  G P  
Sbjct: 898  PGPKGPQGLPGFLGFPGERGKPGQDGHPGRKGEHGEKGWPGSLGDRGLKGVKGARGPPGY 957

Query: 221  ----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      G+ G PG  G  G  G NG+KG  G +G RG+ G  G PG
Sbjct: 958  EGEMDIISKKGETGEPGPSGDGGFPGENGDKGHPGMQGRRGEPGSYGPPG 1007



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 86/197 (43%), Gaps = 45/197 (22%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG----- 152
             + GF     E   PG  G  G+KGE G KG  G  G+RG KG  G  GPPG +G     
Sbjct: 905  GLPGFLGFPGERGKPGQDGHPGRKGEHGEKGWPGSLGDRGLKGVKGARGPPGYEGEMDII 964

Query: 153  -IPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
               G+ G+ GP GD G+PG    +G PG +G+RG  G  G PG          PGEPG +
Sbjct: 965  SKKGETGEPGPSGDGGFPGENGDKGHPGMQGRRGEPGSYGPPGF--------HPGEPGRN 1016

Query: 209  ---------------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------ 241
                                 G PG  G  G PG  G PG  GI GT G  G K      
Sbjct: 1017 GQPGLPGPPGPPGSPGLRGIIGFPGFPGDQGEPGSPGCPGPSGIDGTRGPKGYKGESASQ 1076

Query: 242  -GMTGPRGNRGKSGING 257
             G+ GP+G  G  G  G
Sbjct: 1077 FGLPGPKGEPGSPGYPG 1093



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 76/155 (49%), Gaps = 10/155 (6%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G+ G  G  G  GV G  G+ G PG+ GP GPQG+PG  G     G+ G PG  
Sbjct: 866  GLPGVPGRPGADGTPGLPGVPGPTGDDGLPGLPGPKGPQGLPGFLGF---PGERGKPGQD 922

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---IPGRNGMDGIPGKDGLPGKD 229
            G PG +G+ G KG  G  G  GL G  G  G PG +G   I  + G  G PG     G  
Sbjct: 923  GHPGRKGEHGEKGWPGSLGDRGLKGVKGARGPPGYEGEMDIISKKGETGEPGPS---GDG 979

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGV-PGTPA 263
            G PG NG  G  GM G RG  G  G  G  PG P 
Sbjct: 980  GFPGENGDKGHPGMQGRRGEPGSYGPPGFHPGEPG 1014



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 88/196 (44%), Gaps = 56/196 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G++G+ G  G  G KGE GEKG PG +G         D G +G KG  G PG 
Sbjct: 907  PGFLGFPGERGKPGQDGHPGRKGEHGEKGWPGSLG---------DRGLKGVKGARGPPGY 957

Query: 172  QG------IPGDEGKRGPKGDMGYP------GRIGLDGRDGLPGE---PGLD-GIPGRN- 214
            +G        G+ G+ GP GD G+P      G  G+ GR G PG    PG   G PGRN 
Sbjct: 958  EGEMDIISKKGETGEPGPSGDGGFPGENGDKGHPGMQGRRGEPGSYGPPGFHPGEPGRNG 1017

Query: 215  --------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS- 253
                                G  G PG  G PG  G PG +G +G +   GP+G +G+S 
Sbjct: 1018 QPGLPGPPGPPGSPGLRGIIGFPGFPGDQGEPGSPGCPGPSGIDGTR---GPKGYKGESA 1074

Query: 254  ------GINGVPGTPA 263
                  G  G PG+P 
Sbjct: 1075 SQFGLPGPKGEPGSPG 1090



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 73/164 (44%), Gaps = 55/164 (33%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-------DMGYPGPQGIPGDEGKRGP 183
            G  G++GE G+PG    PGP GI   +G RGPKG         G PGP+G PG       
Sbjct: 1041 GFPGDQGEPGSPGC---PGPSGI---DGTRGPKGYKGESASQFGLPGPKGEPGSP----- 1089

Query: 184  KGDMGYPGRIGLDGRD---------------------------GLPGEPGLDGIPGR--- 213
                GYPG++G  G                             G PGEPGL G PG    
Sbjct: 1090 ----GYPGQLGASGEQGLPGAQGPGGPPGRPGPPGFSGPTGCPGNPGEPGLQGPPGEVGD 1145

Query: 214  ---NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                G+ G PG  GLPG  G  G+ G NG  G+ G +G++G SG
Sbjct: 1146 PGPRGIVGDPGAPGLPGIKGPSGSPGLNGLHGLKGQKGSKGASG 1189



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 39/76 (51%), Gaps = 14/76 (18%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQ----------GIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            G PG  G  GP G  G PGP           G+PG  G RGP+G MG PG  GL G  G 
Sbjct: 1297 GPPGRRGPLGPPGSRGEPGPPADLDACPRIPGLPGVPGPRGPEGTMGLPGMRGLPG-PGC 1355

Query: 202  PGEPGLDGIPGRNGMD 217
             GEPGLDG   R G D
Sbjct: 1356 KGEPGLDG---RRGED 1368



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 65/157 (41%), Gaps = 31/157 (19%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK-GAPGVVGPPGPQGIP 154
            ++   GF     E   PG  GP G  G  G KG    KGE   + G PG  G PG  G P
Sbjct: 1036 IIGFPGFPGDQGEPGSPGCPGPSGIDGTRGPKG---YKGESASQFGLPGPKGEPGSPGYP 1092

Query: 155  GDEGKRGPK---------------------------GDMGYPGPQGIPGDEGKRGPKGDM 187
            G  G  G +                           G+ G PG QG PG+ G  GP+G +
Sbjct: 1093 GQLGASGEQGLPGAQGPGGPPGRPGPPGFSGPTGCPGNPGEPGLQGPPGEVGDPGPRGIV 1152

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            G PG  GL G  G  G PGL+G+ G  G  G  G  G
Sbjct: 1153 GDPGAPGLPGIKGPSGSPGLNGLHGLKGQKGSKGASG 1189


>gi|355754806|gb|EHH58707.1| hypothetical protein EGM_08620 [Macaca fascicularis]
          Length = 1712

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 94/169 (55%), Gaps = 15/169 (8%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     +  PPG +G  G  G  G KG+ G+ G  G+   PG+ GPPG  G PG  G+ 
Sbjct: 794 GFKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGASGQ---PGLSGPPGQHGFPGAPGQE 850

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGRN 214
           GP G  G PG +G+PGD   RG  GD+G PG +G+ G        GL GE G  G PG  
Sbjct: 851 GPLGLPGIPGLEGLPGD---RGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGHPGSPGFK 907

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
           G+DG+PG  GL G+ G PG +G  G    KG  G  G++G++G  G+PG
Sbjct: 908 GIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPG 956



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 85/149 (57%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ G  G  G+ G  G  G++G  G+ G PG +G+PGD   RG  GD+G PGP
Sbjct: 823 PGLPGASGQPGLSGPPGQHGFPGAPGQEGPLGLPGIPGLEGLPGD---RGDPGDIGAPGP 879

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
              +G+ GD G  G  G+ G+PG  G  G DG+PG PGL G  G  GMDG  G  GL G+
Sbjct: 880 VGMKGVSGDRGDAGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGR 939

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG+ G  G  G+ G +G  G+ G  G
Sbjct: 940 PGFPGSKGEAGFFGIPGLKGLAGEPGFKG 968



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 81/151 (53%), Gaps = 6/151 (3%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           + G +G+ GV G+ G KG PG  GPPG +G  G  G  G KG  G PG  G PG     G
Sbjct: 780 QPGPRGDAGVPGQPGFKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGASGQPG---LSG 836

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           P G  G+PG  G +G  GLPG PGL+G+PG     G PG  G PG  G+ G +G  G+ G
Sbjct: 837 PPGQHGFPGAPGQEGPLGLPGIPGLEGLPGDR---GDPGDIGAPGPVGMKGVSGDRGDAG 893

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           + G RG+ G  G  G+ G P     K E  S
Sbjct: 894 LAGERGHPGSPGFKGIDGMPGTPGLKGERGS 924



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 86/158 (54%), Gaps = 14/158 (8%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK----RGPKGDMGYPGPQGIPG 176
            KGE G +G MG+KG  G KG  G+ G PG  GIPG  G+    +G KGD+G PG  G+PG
Sbjct: 990  KGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGAPGIPGLPG 1049

Query: 177  DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-------IPGKDGLPGKD 229
              G  GP G  G+PG IG  G  G PG  GL G  G  G  G       +PG+ GL G+ 
Sbjct: 1050 FPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGPTGDFGDIGDTINLPGRPGLKGEQ 1109

Query: 230  ---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
               GIPG  G  GEKG  G  G  G +G+ GV G P +
Sbjct: 1110 GTAGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGL 1147



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 106/224 (47%), Gaps = 37/224 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G  G  G  G  G  G  G+ G +G PGV G      +PG++G RG +G MG  GP
Sbjct: 1307 PGSKGDAGNPGAPGTPGTKGWAGDSGPQGRPGVFG------LPGEKGPRGEQGFMGNTGP 1360

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-------EPGLDGIPGRNGMDGIPGK-- 222
             G  GD G +GPKGD G+PG  G+ G  G+ G        PG  G  GR G  G PG+  
Sbjct: 1361 AGAVGDRGPKGPKGDPGFPGAPGIVGAPGIAGIPQKIAIPPGTVGPQGRRGPPGAPGEMG 1420

Query: 223  ----------DGLPGKDGIPGTNGTN------GEKGMTGPRGNRGKSGINGVPGTPAICA 266
                       G PGK G  G  G +      G++G  G +G  G+ G  G PG+P +  
Sbjct: 1421 PQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPVGHQGPIGQEGAPGRPGSPGLPG 1480

Query: 267  YKRESCS----LLPNSETSQLLIPPTIVGSEHIFSSSPIVVREG 306
                S S    L+ +S+T Q  + P  VG   ++S   ++  EG
Sbjct: 1481 MPGRSVSIGYLLVKHSQTEQEPMCP--VGMNKLWSGYSLLYFEG 1522



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 81/168 (48%), Gaps = 21/168 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+G  G  G  G KG  G KG  G+ G PG+ G  G QG PG +G+ G  G  G PG 
Sbjct: 1103 PGLKGEQGTAGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGS 1162

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
            QG PG  G  G KGD G+PG  GL G  GL G  GL G+PG  G  G PG D        
Sbjct: 1163 QGEPGRIGLPGGKGDDGWPGIAGLPGFPGLRGIRGLHGLPGTKGFPGSPGADIHGDPGFP 1222

Query: 224  -------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                          LPG  G+PG  G  G  G  GP G+ G  G  G+
Sbjct: 1223 GPPGDRGDPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGLQGFPGI 1270



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 85/175 (48%), Gaps = 20/175 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP+G  G  G +G  G +G+ G+ GAPG VG  G  G  GD G  G +G  G PG 
Sbjct: 847  PGQEGPLGLPGIPGLEGLPGDRGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGHPGSPGF 906

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            +GI G  G  G KG+ G PG  G  G  GL G PG  G  G  G  GIPG  GL G+ G 
Sbjct: 907  KGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGF 966

Query: 232  PGTNG-----------------TNGEKGMTGP---RGNRGKSGINGVPGTPAICA 266
             G+ G                   GEKG  GP   +G  G  GI G+PG P +  
Sbjct: 967  KGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSG 1021



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 96/207 (46%), Gaps = 52/207 (25%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE-------------KGAPGVVGPPGPQGIPGDEG- 158
            G  G IG +G+ GA G  G+ GE G               G PG+ G  G  GIPG +G 
Sbjct: 1061 GFPGFIGSRGDKGAPGRAGLYGEIGPTGDFGDIGDTINLPGRPGLKGEQGTAGIPGLKGF 1120

Query: 159  --KRGPKGDMGYP------GPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGE 204
              ++G +GD+G+P      G QG PG +G+       GP G  G PGRIGL G  G  G 
Sbjct: 1121 FGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQGEPGRIGLPGGKGDDGW 1180

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------------------------GE 240
            PG+ G+PG  G+ GI G  GLPG  G PG+ G +                        G 
Sbjct: 1181 PGIAGLPGFPGLRGIRGLHGLPGTKGFPGSPGADIHGDPGFPGPPGDRGDPGDANTLPGP 1240

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAY 267
             G+ G +G +G  G  G PG+P +  +
Sbjct: 1241 VGVPGQKGEQGAPGERGPPGSPGLQGF 1267



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 86/161 (53%), Gaps = 27/161 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMG----VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           PGL G  G +G  G KG+ G     +G+   +G PG+ GP G  GI G+ G++G KGD G
Sbjct: 462 PGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGINGEPGRKGDKGDPG 521

Query: 168 ------YPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGL---DGIPGRNG 215
                 +PG +G+PG+ G  GPKG  G    I   G  G+ G+PG PG+   DG PGRNG
Sbjct: 522 QHGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRNG 581

Query: 216 M-----------DGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           +           DGI G  G  G  GIPGT GT GE G  G
Sbjct: 582 LDGFPGLPGPPGDGIKGPSGDAGYPGIPGTKGTPGEMGPPG 622



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 90/202 (44%), Gaps = 54/202 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERG---------------------EKGAPGV---VGPP 148
            G  GP+G KG  G +G+ G+ GERG                     E+G+PG+    G P
Sbjct: 875  GAPGPVGMKGVSGDRGDAGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMP 934

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------------- 186
            G +G PG  G +G  G  G PG +G+ G+ G +G +GD                      
Sbjct: 935  GLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPIILPGMKDIKGEKG 994

Query: 187  ----MGYPGRIGLDGRDGLPGEPGLDGIPGRNG----MDGIPGKDGLPGKDGIPGTNGTN 238
                MG  G +G  G  G+PG PGL GIPG  G    + G+ G  G PG  G+PG  G  
Sbjct: 995  DEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGAPGIPGLPGFPGVA 1054

Query: 239  GEKGMTGPRGNRGKSGINGVPG 260
            G  G+TG  G  G  G  G PG
Sbjct: 1055 GPPGITGFPGFIGSRGDKGAPG 1076



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 63/129 (48%), Gaps = 16/129 (12%)

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG----YPGRIGLDGRDGLPGEPGLDGI--- 210
           G++G KG  G+PG  G PG  G +G KGD G      G   + G  GLPG  G  GI   
Sbjct: 451 GRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGINGE 510

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGTPAI 264
           PGR G  G PG+ GLP   G PG  G  G  G  GP+G +G S      G  G PG P +
Sbjct: 511 PGRKGDKGDPGQHGLP---GFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPGVPGV 567

Query: 265 CAYKRESCS 273
              K +  S
Sbjct: 568 PGMKGDDGS 576



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 87/187 (46%), Gaps = 36/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G +GE    G +G+ G +G+ G PG+ G      +PG  G RG +G  G PG 
Sbjct: 1154 PGLTGPPGSQGE---PGRIGLPGGKGDDGWPGIAG------LPGFPGLRGIRGLHGLPGT 1204

Query: 172  QGIPGDEGK--------------RGPKGDMG-YPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G PG  G               RG  GD    PG +G+ G+ G  G PG  G PG  G+
Sbjct: 1205 KGFPGSPGADIHGDPGFPGPPGDRGDPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGL 1264

Query: 217  DGIPG------KDGLPGKDGIPGTNGTNGEKGMTGPR------GNRGKSGINGVPGTPAI 264
             G PG        G PG  G PG  G  G +G  GP       G++G +G  G PGTP  
Sbjct: 1265 QGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDAGNPGAPGTPGT 1324

Query: 265  CAYKRES 271
              +  +S
Sbjct: 1325 KGWAGDS 1331



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 76/173 (43%), Gaps = 39/173 (22%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD----EGKRGPKGDMGYPGPQGIPGDEG 179
            G KG  G  G  G  G+PG  GP G +G  GD    EG    +G  G PGP+G  G  G
Sbjct: 450 FGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGING 509

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------------------GRNGMDG 218
           + G KGD G PG+       GLPG PGL G+P                     G  G  G
Sbjct: 510 EPGRKGDKGDPGQ------HGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPG 563

Query: 219 IPGKDGLPGKDGIPGTNG--------TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           +PG  G+ G DG PG NG             G+ GP G+ G  GI G  GTP 
Sbjct: 564 VPGVPGMKGDDGSPGRNGLDGFPGLPGPPGDGIKGPSGDAGYPGIPGTKGTPG 616



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 66/132 (50%), Gaps = 24/132 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           G+ G  G+KG+ G  G+ G+ G  G KG PG VG PGP+G  GD      +G+RG  G  
Sbjct: 506 GINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPGVP 565

Query: 167 GYPGPQG---IPGDEGK--------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
           G PG +G    PG  G               +GP GD GYPG  G  G  G  G PGL G
Sbjct: 566 GVPGMKGDDGSPGRNGLDGFPGLPGPPGDGIKGPSGDAGYPGIPGTKGTPGEMGPPGL-G 624

Query: 210 IPGRNGMDGIPG 221
           +PG  G  G PG
Sbjct: 625 LPGFKGQRGFPG 636



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 64/134 (47%), Gaps = 19/134 (14%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQG 152
            QGF  +T      G +GP G KG+ G  G  G+ G  G  G        PG VGP G +G
Sbjct: 1352 QGFMGNTGPAGAVGDRGPKGPKGDPGFPGAPGIVGAPGIAGIPQKIAIPPGTVGPQGRRG 1411

Query: 153  IPGDEGK------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
             PG  G+            RG  G  G  G  G+    G RG +G +G+ G IG +G  G
Sbjct: 1412 PPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPVGHQGPIGQEGAPG 1471

Query: 201  LPGEPGLDGIPGRN 214
             PG PGL G+PGR+
Sbjct: 1472 RPGSPGLPGMPGRS 1485



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 9/76 (11%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G +G+ G  G  G  GPPG QG PG +G++G KG+ G P         G  GPKGD+G
Sbjct: 56  EKGGRGQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAP---------GITGPKGDVG 106

Query: 189 YPGRIGLDGRDGLPGE 204
             G  G  G DG+PG 
Sbjct: 107 ARGVSGFPGADGIPGH 122



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 91/255 (35%), Gaps = 81/255 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-PQGIPGDEGKRGPKGDMGYPGP 171
           G +G  GQKG  G  G  G  G RG KG  G +GPPG P   P     +G +GD G+PG 
Sbjct: 311 GEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDLGPPGLPAYSPHPSLAKGARGDPGFPGA 370

Query: 172 QGIPGDE--------------------------GKRGPKGDMGYPG-------------- 191
           QG PG +                          G+ GPKG +G PG              
Sbjct: 371 QGEPGSQGEPGDPGPRGPPGLSIGDEDQRRGLPGEMGPKGFIGDPGIPALYPGPPGPDGK 430

Query: 192 ------------------RIGLDGRDGLPGEPGLDGIPGRNG------------------ 215
                               G  G  G PG PGL G PG  G                  
Sbjct: 431 PGPPGPPGLPGPPGPDGFLFGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDE 490

Query: 216 ----MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               + G+PG  G  G +G PG  G  G+ G  G  G  G  G+ G  G P     K +S
Sbjct: 491 AVRGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGAPGPKGAKGDS 550

Query: 272 CSLLPNSETSQLLIP 286
            ++    E  Q  +P
Sbjct: 551 RTITTKGERGQPGVP 565



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 21/121 (17%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           E+G +G PG VGP         +G  GP G  G+PG QG  GD+G+RG  G  G  G +G
Sbjct: 56  EKGGRGQPGPVGP---------QGYNGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVG 106

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG             DGIPG  G  G  G PG +G NG +G +GP+G  G  G
Sbjct: 107 ARGVSGFPG------------ADGIPGHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEG 154

Query: 255 I 255
            
Sbjct: 155 F 155



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 81/207 (39%), Gaps = 65/207 (31%)

Query: 119 GQKGEIGAKGEMG-----------------VKGERGEKGAPGVVGPPGPQGIPGDE---- 157
           G  G  GA+GE G                 +  E   +G PG +GP G  G PG      
Sbjct: 363 GDPGFPGAQGEPGSQGEPGDPGPRGPPGLSIGDEDQRRGLPGEMGPKGFIGDPGIPALYP 422

Query: 158 ----------------------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM-- 187
                                       G++G KG  G+PG  G PG  G +G KGD   
Sbjct: 423 GPPGPDGKPGPPGPPGLPGPPGPDGFLFGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGD 482

Query: 188 --------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                         G PG  G  G +G PG  G  G PG++G+ G PG  G+PG  G PG
Sbjct: 483 CRCAEGDEAVRGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGAPG 542

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+      +G RG+ G+ GVPG
Sbjct: 543 PKGAKGDSRTITTKGERGQPGVPGVPG 569


>gi|181331962|ref|NP_001116702.1| collagen alpha-5(IV) chain precursor [Danio rerio]
          Length = 1659

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 80/144 (55%), Gaps = 24/144 (16%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           VKG +G++G PG+ G PG  G PG EG  GP+G+ G  GPQG  G +G RGP        
Sbjct: 42  VKGVKGDRGLPGLKGQPGVPGFPGPEGPMGPRGEKGDDGPQGSIGPKGIRGP-------- 93

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                     PG PG  G P   G+ G+PG+DG PG  GIPG NGT GE+G     GN G
Sbjct: 94  ----------PGLPGFSGTP---GIPGLPGQDGAPGPRGIPGCNGTKGERGFP---GNPG 137

Query: 252 KSGINGVPGTPAICAYKRESCSLL 275
           +SG++G PG P +   K +   ++
Sbjct: 138 RSGLDGQPGPPGLIGQKAKPGEVI 161



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/149 (46%), Positives = 80/149 (53%), Gaps = 12/149 (8%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G  G KGE G  G  G  G  G  G PGPQG+    G  GPKGD G PG QG PG+ 
Sbjct: 1068 GLPGNPGPKGEPGTPGFPGPAGLKGQPGFPGPQGL---TGSPGPKGDPGLPGFQGAPGNP 1124

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G   PKG  G PG  GL+G  G PG+PG      R+G+ GIPG  GL G+DGIPG  G  
Sbjct: 1125 G---PKGLDGAPGPAGLNGAPGRPGDPG------RSGLPGIPGDKGLAGRDGIPGPAGQK 1175

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            GE G+ G  G +G  G  G PG      +
Sbjct: 1176 GEPGLPGQPGLKGAKGDPGFPGPAGSAGF 1204



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 84/171 (49%), Gaps = 18/171 (10%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            +P   + G      E   PG  GP G KG+ G  G  G+ G  G KG PG+   PG QG 
Sbjct: 1064 VPGYGLPGNPGPKGEPGTPGFPGPAGLKGQPGFPGPQGLTGSPGPKGDPGL---PGFQGA 1120

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            PG+    GPKG  G PGP G+             G PGR G  GR GLPG PG  G+ GR
Sbjct: 1121 PGNP---GPKGLDGAPGPAGL------------NGAPGRPGDPGRSGLPGIPGDKGLAGR 1165

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            +G+ G  G+ G PG  G PG  G  G+ G  GP G+ G  G  G  G P +
Sbjct: 1166 DGIPGPAGQKGEPGLPGQPGLKGAKGDPGFPGPAGSAGFPGPKGDAGFPGL 1216



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 90/230 (39%), Gaps = 78/230 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV-------KGERGEKGAPGVVGPPGPQGI----------- 153
            PG  G  G KGE G +G  G+       KG++GE G PG  GPPGP+GI           
Sbjct: 929  PGFPGLKGDKGETGIQGPPGITTSTSVLKGQKGESGVPGFSGPPGPKGITGISGDPGLPG 988

Query: 154  -------------------------PGDEGKRGPKGDMGYPGPQGI-------------- 174
                                     PG  G +G  G+MG PG  G+              
Sbjct: 989  QDGRPGLPGPPGPKGDAGLPGIPGSPGATGLKGAMGEMGLPGVPGVKGNSGQPGQPGQPG 1048

Query: 175  ---------------------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                                 PG+ G +G  G  G+PG  GL G+ G PG  GL G PG 
Sbjct: 1049 SPGGPGFPGPKGEAGVPGYGLPGNPGPKGEPGTPGFPGPAGLKGQPGFPGPQGLTGSPGP 1108

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G+PG  G PG  G  G +G  G  G+ G  G  G  G +G+PG P 
Sbjct: 1109 KGDPGLPGFQGAPGNPGPKGLDGAPGPAGLNGAPGRPGDPGRSGLPGIPG 1158



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 84/194 (43%), Gaps = 61/194 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG---------------------------EKGAPGV 144
            PG+ G  G  G  GA GEMG+ G  G                           E G PG 
Sbjct: 1008 PGIPGSPGATGLKGAMGEMGLPGVPGVKGNSGQPGQPGQPGSPGGPGFPGPKGEAGVPGY 1067

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                   G+PG+ G +G  G  G+PGP G+         KG  G+PG  GL G  G  G+
Sbjct: 1068 -------GLPGNPGPKGEPGTPGFPGPAGL---------KGQPGFPGPQGLTGSPGPKGD 1111

Query: 205  PGL---------------DGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGP 246
            PGL               DG PG  G++G PG+ G PG+    GIPG  G  G  G+ GP
Sbjct: 1112 PGLPGFQGAPGNPGPKGLDGAPGPAGLNGAPGRPGDPGRSGLPGIPGDKGLAGRDGIPGP 1171

Query: 247  RGNRGKSGINGVPG 260
             G +G+ G+ G PG
Sbjct: 1172 AGQKGEPGLPGQPG 1185



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 55/93 (59%), Gaps = 9/93 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G+KG+ G +G +G KG RG  G PG  G PG  G+PG +G          PG
Sbjct: 66  PEGPMGPRGEKGDDGPQGSIGPKGIRGPPGLPGFSGTPGIPGLPGQDG---------APG 116

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           P+GIPG  G +G +G  G PGR GLDG+ G PG
Sbjct: 117 PRGIPGCNGTKGERGFPGNPGRSGLDGQPGPPG 149



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 88/220 (40%), Gaps = 53/220 (24%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            QG   S      PGL G  G  G  G KG  G  G  G  GAPG  G PG  G+PG  G 
Sbjct: 1100 QGLTGSPGPKGDPGLPGFQGAPGNPGPKGLDGAPGPAGLNGAPGRPGDPGRSGLPGIPGD 1159

Query: 160  RGPKGDMGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            +G  G  G PGP       G+PG  G +G KGD G+PG  G  G  G  G+ G  G+PG+
Sbjct: 1160 KGLAGRDGIPGPAGQKGEPGLPGQPGLKGAKGDPGFPGPAGSAGFPGPKGDAGFPGLPGQ 1219

Query: 214  --------------------------------------NGMDGIPGKD---------GLP 226
                                                   G+ G+PG           G P
Sbjct: 1220 IGSVGPPGPPGLPLQGPKGIQGPPGPPGRAGSGGVKGEKGLPGVPGTPGEAGQKGDYGSP 1279

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            G  G PG+ G NG KG  GP+G  G  G  GV G P I  
Sbjct: 1280 GFPGSPGSPGPNGLKGDPGPQGVPGFPGSKGVSGPPGISG 1319



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 76/168 (45%), Gaps = 37/168 (22%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGE+G+ G  G KG  G  GAPG  GP               KGD G PG  
Sbjct: 882  GLPGLPGSKGEMGSMGPPGSKGNPGNPGAPGFPGP---------------KGDDGVPGQS 926

Query: 173  GIPGDEGKRGPKGDMGYPGRIG-------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G PG  G +G KG+ G  G  G       L G+ G  G PG  G PG  G+ GI G  GL
Sbjct: 927  GNPGFPGLKGDKGETGIQGPPGITTSTSVLKGQKGESGVPGFSGPPGPKGITGISGDPGL 986

Query: 226  PGKD---------------GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            PG+D               G+PG  G+ G  G+ G  G  G  G+ GV
Sbjct: 987  PGQDGRPGLPGPPGPKGDAGLPGIPGSPGATGLKGAMGEMGLPGVPGV 1034



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 50/173 (28%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ GP GQKGE G  G+ G+KG +G+   PG  GP G  G P      GPKGD G+P   
Sbjct: 1167 GIPGPAGQKGEPGLPGQPGLKGAKGD---PGFPGPAGSAGFP------GPKGDAGFP--- 1214

Query: 173  GIPGD-----------------------------------EGKRGPKGDMGYPGRIGLDG 197
            G+PG                                    +G++G  G  G PG  G  G
Sbjct: 1215 GLPGQIGSVGPPGPPGLPLQGPKGIQGPPGPPGRAGSGGVKGEKGLPGVPGTPGEAGQKG 1274

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
              G PG PG  G PG NG+ G PG  G+P   G PG+ G +G  G++G  G R
Sbjct: 1275 DYGSPGFPGSPGSPGPNGLKGDPGPQGVP---GFPGSKGVSGPPGISGLPGAR 1324



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 10/88 (11%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRGPKGDMGYPGPQG 173
           QKGE G  GE G +G+ G+ G PG++G PG      P G+PG +G RG KGD G PGP  
Sbjct: 283 QKGEKGEPGEAGKRGKPGKDGEPGLLGYPGDKGDQGPPGLPGRDGFRGEKGDQGPPGPPS 342

Query: 174 IPGDE----GKRGPKGDMGYPGRIGLDG 197
             GD+    G  GPKGD G PG  G+ G
Sbjct: 343 YRGDQFTGVGGIGPKGDRGDPGPSGIKG 370



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 50/101 (49%), Gaps = 19/101 (18%)

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG  G +G  G MG PG        G PG PG  G PG  G DG+PG+ G P   G P
Sbjct: 882 GLPGLPGSKGEMGSMGPPGS------KGNPGNPGAPGFPGPKGDDGVPGQSGNP---GFP 932

Query: 233 GTNGTNGEKGMTGP----------RGNRGKSGINGVPGTPA 263
           G  G  GE G+ GP          +G +G+SG+ G  G P 
Sbjct: 933 GLKGDKGETGIQGPPGITTSTSVLKGQKGESGVPGFSGPPG 973


>gi|410897369|ref|XP_003962171.1| PREDICTED: collagen alpha-2(V) chain-like [Takifugu rubripes]
          Length = 1478

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/157 (45%), Positives = 86/157 (54%), Gaps = 15/157 (9%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG- 179
           +G IG +GE   +G+RG++G PG VGPPGP G  G  G RG  G  G PGP+G  GD G 
Sbjct: 465 QGVIGPQGE---EGKRGQRGDPGSVGPPGPVGERGASGNRGFPGADGLPGPKGAQGDRGI 521

Query: 180 --KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
               GPKG +G PGR G     GLPG  GL G PG  G +G PG  G  G+DG PG  G 
Sbjct: 522 SGPPGPKGSLGDPGRTG---EPGLPGARGLTGTPGVQGAEGKPGPLGAAGEDGRPGPAGP 578

Query: 238 NGEKG------MTGPRGNRGKSGINGVPGTPAICAYK 268
            G +G       TGP+G  G  G  G  G+P +   +
Sbjct: 579 IGNRGPSGIMGSTGPKGFSGDPGKTGEQGSPGVAGQR 615



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 87/175 (49%), Gaps = 30/175 (17%)

Query: 113 GLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGK------- 159
           G+ GP G KG +G     GE G+ G RG  G PGV G    PGP G  G++G+       
Sbjct: 520 GISGPPGPKGSLGDPGRTGEPGLPGARGLTGTPGVQGAEGKPGPLGAAGEDGRPGPAGPI 579

Query: 160 --RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------------LPGEP 205
             RGP G MG  GP+G  GD GK G +G  G  G+ G  G+DG            + GE 
Sbjct: 580 GNRGPSGIMGSTGPKGFSGDPGKTGEQGSPGVAGQRGPPGKDGEVGPAGPPGPSGVAGER 639

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGING 257
           G  G PG NG  G+PG  G PG+ G PG  G  GE G     GPRG RG  G  G
Sbjct: 640 GEQGPPGVNGFQGLPGNQGPPGESGKPGDVGIPGELGAVGQIGPRGERGNPGERG 694



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 84/164 (51%), Gaps = 27/164 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG++G +G  G  G KGE G KGE G  G+ GV+GP G      +EGKRG +GD G  GP
Sbjct: 435 PGIKGQLGDVGLPGFKGEAGPKGEPGPPGSQGVIGPQG------EEGKRGQRGDPGSVGP 488

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------------PGEPGLDGIPGR 213
              PG  G+RG  G+ G+PG  GL G  G                   PG  G  G+PG 
Sbjct: 489 ---PGPVGERGASGNRGFPGADGLPGPKGAQGDRGISGPPGPKGSLGDPGRTGEPGLPGA 545

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G+ G PG  G  GK G  G  G +G  G  GP GNRG SGI G
Sbjct: 546 RGLTGTPGVQGAEGKPGPLGAAGEDGRPGPAGPIGNRGPSGIMG 589



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 84/168 (50%), Gaps = 15/168 (8%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            QG  GQ GE G  G +GV G +G +G PG  GP G  G PG +G  G +GD G PGP+G+
Sbjct: 993  QGSAGQSGEKGPPGPVGVPGAKGPRGDPGPDGPAGSDGPPGKDGVLGQRGDRGDPGPEGL 1052

Query: 175  PGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G +   G  GP G  G PGR G  G  G  G PG              GK GL G  G 
Sbjct: 1053 IGSQGLPGPAGPVGSQGGPGRRGDIGSRGPVGPPGAA------------GKRGLVGPQGP 1100

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
             G  G  G+ G  G +G+RG +G+ G+PG P     +  +  L P+ +
Sbjct: 1101 RGDKGDLGDHGERGQKGHRGFTGLQGLPGPPGTTGEQGATGILGPSGQ 1148



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 92/192 (47%), Gaps = 45/192 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG------ERGEKGAPGVVG---PPGPQG---------- 152
           PG  GPIG +G  G  G  G KG      + GE+G+PGV G   PPG  G          
Sbjct: 573 PGPAGPIGNRGPSGIMGSTGPKGFSGDPGKTGEQGSPGVAGQRGPPGKDGEVGPAGPPGP 632

Query: 153 --IPGDEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
             + G+ G++GP G  G+   PG QG PG+ GK    GD+G PG +G  G+ G  GE G 
Sbjct: 633 SGVAGERGEQGPPGVNGFQGLPGNQGPPGESGK---PGDVGIPGELGAVGQIGPRGERGN 689

Query: 208 DGIPGRNGMDGIPGKDGLPGKD------------------GIPGTNGTNGEKGMTGPRGN 249
            G  G  G +G+ G  G+PG                    G PG  G  GE+G++GP G 
Sbjct: 690 PGERGELGPNGLQGPKGIPGAPGPDGPKGSPGPPGAIGDAGPPGLQGMPGERGISGPPGP 749

Query: 250 RGKSGINGVPGT 261
           +G+ G  G  G+
Sbjct: 750 KGERGTLGEKGS 761



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 63/125 (50%), Gaps = 15/125 (12%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KG  G  G +G KGE G  G+ G  GP GP G PG              GP G+PG+ G+
Sbjct: 273 KGHKGHLGILGQKGENGAVGSKGATGPHGPMGAPGPM------------GPAGMPGERGR 320

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            GP    G PG+ G+ G  G PG  G  G+ G +G  G PG  G PG  G+ G  G  G+
Sbjct: 321 SGPS---GTPGKRGVPGSVGKPGSLGPLGLSGPSGYPGTPGMKGQPGPTGVRGPQGPQGQ 377

Query: 241 KGMTG 245
           +G TG
Sbjct: 378 RGETG 382



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 69/151 (45%), Gaps = 33/151 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE---------KGAPGVVGPPGPQGIPG---DEGK 159
            PG  GP G  G  G  G +G +G+RG+         +G PG  GP G QG PG   D G 
Sbjct: 1020 PGPDGPAGSDGPPGKDGVLGQRGDRGDPGPEGLIGSQGLPGPAGPVGSQGGPGRRGDIGS 1079

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            RGP G  G  G +G+ G +G RG KGD+G  G  G  G  G              G+ G+
Sbjct: 1080 RGPVGPPGAAGKRGLVGPQGPRGDKGDLGDHGERGQKGHRGF------------TGLQGL 1127

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            PG          PGT G  G  G+ GP G R
Sbjct: 1128 PGP---------PGTTGEQGATGILGPSGQR 1149



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 75/179 (41%), Gaps = 36/179 (20%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGA---KGEMGVKGE---------------RGE 138
           V   G   S+ +  P GL G  G+ GE G     GEMG  G                +G 
Sbjct: 216 VGDPGHMGSSGQRGPEGLMGKPGEDGEPGKPGNNGEMGFSGSPGARGFPGMPGPPGLKGH 275

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
           KG  G++G  G  G  G +G  GP G MG PGP G  G  G+RG               R
Sbjct: 276 KGHLGILGQKGENGAVGSKGATGPHGPMGAPGPMGPAGMPGERG---------------R 320

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G PG  G+PG  G  G  G  GL G  G PGT G    KG  GP G RG  G  G
Sbjct: 321 SGPSGTPGKRGVPGSVGKPGSLGPLGLSGPSGYPGTPGM---KGQPGPTGVRGPQGPQG 376



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 69/162 (42%), Gaps = 39/162 (24%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP----------------- 150
           +  PPGLQG  G++G  G  G  G +G  GEKG+ G  G  G                  
Sbjct: 728 DAGPPGLQGMPGERGISGPPGPKGERGTLGEKGSEGTAGNDGARGSPGPVGPPGSAGPSG 787

Query: 151 ----------------QGIPGDEGKRGPKGDMGY---PGPQGIP---GDEGKRGPKGDMG 188
                           +G PG  G  GP G  G+   PGP G P   G+ G+ G KGD G
Sbjct: 788 EKGEPGPKGPHGPPGSRGTPGSRGDPGPIGPTGFSGAPGPDGQPGVKGEVGEPGQKGDAG 847

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            PG  GL G  G PG  G+ G+ G  G  G PG  G PG  G
Sbjct: 848 SPGPQGLAGAHGPPGPVGVAGLKGGRGTQGAPGPTGFPGSAG 889



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 91/228 (39%), Gaps = 60/228 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ 151
            + GF        PPG  G    +G  GE+GA G++G +GERG  G  G +GP    GP+
Sbjct: 646 GVNGFQGLPGNQGPPGESGKPGDVGIPGELGAVGQIGPRGERGNPGERGELGPNGLQGPK 705

Query: 152 GIPGDE---------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GIPG                 G  GP G  G PG +GI G  G +G +G +G  G  G  
Sbjct: 706 GIPGAPGPDGPKGSPGPPGAIGDAGPPGLQGMPGERGISGPPGPKGERGTLGEKGSEGTA 765

Query: 197 GRDGLP---------------------------------GEPGLDGIPGR---NGMDGIP 220
           G DG                                   G PG  G PG     G  G P
Sbjct: 766 GNDGARGSPGPVGPPGSAGPSGEKGEPGPKGPHGPPGSRGTPGSRGDPGPIGPTGFSGAP 825

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G DG P   G+ G  G  G+KG  G  G +G +G +G PG   +   K
Sbjct: 826 GPDGQP---GVKGEVGEPGQKGDAGSPGPQGLAGAHGPPGPVGVAGLK 870



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 77/164 (46%), Gaps = 24/164 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP    GE+G  G MG  G+RG +G   ++G PG  G PG   K G  G+MG+    
Sbjct: 208 GAQGP---PGEVGDPGHMGSSGQRGPEG---LMGKPGEDGEPG---KPGNNGEMGF---S 255

Query: 173 GIPGD------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G PG             +G +G  G +G  G  G  G  G  G  G  G PG  G  G+P
Sbjct: 256 GSPGARGFPGMPGPPGLKGHKGHLGILGQKGENGAVGSKGATGPHGPMGAPGPMGPAGMP 315

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G+ G  G  G PG  G  G  G  G  G  G SG +G PGTP +
Sbjct: 316 GERGRSGPSGTPGKRGVPGSVGKPGSLGPLGLSGPSGYPGTPGM 359



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 50/116 (43%), Gaps = 33/116 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
           PG  GP G  G  G  G+ GVKGE GE G  G  G PGPQG+ G  G  GP         
Sbjct: 813 PGPIGPTGFSGAPGPDGQPGVKGEVGEPGQKGDAGSPGPQGLAGAHGPPGPVGVAGLKGG 872

Query: 163 KGDMGYPGPQGIPGD------------------------EGKRGPKGDMGYPGRIG 194
           +G  G PGP G PG                         EG RG +GD G PG+ G
Sbjct: 873 RGTQGAPGPTGFPGSAGRVGPPGPPGPLGEPGPLGAPGKEGPRGLRGDYGAPGKQG 928



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 87/209 (41%), Gaps = 66/209 (31%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------V---GPPGPQGIPGDE 157
           GP G++G  G +GE+G  G +G KG PG                +   GPPG QG+PG+ 
Sbjct: 682 GPRGERGNPGERGELGPNGLQGPKGIPGAPGPDGPKGSPGPPGAIGDAGPPGLQGMPGER 741

Query: 158 GKRGP------KGDMGYPGPQGIPGDEG-------------------------------- 179
           G  GP      +G +G  G +G  G++G                                
Sbjct: 742 GISGPPGPKGERGTLGEKGSEGTAGNDGARGSPGPVGPPGSAGPSGEKGEPGPKGPHGPP 801

Query: 180 -KRGPKGDMGYPGRIGLDGRDGLP---GEPGLD---GIPGRNGMDGIPGKDGLPGKDGIP 232
             RG  G  G PG IG  G  G P   G+PG+    G PG+ G  G PG  GL G  G P
Sbjct: 802 GSRGTPGSRGDPGPIGPTGFSGAPGPDGQPGVKGEVGEPGQKGDAGSPGPQGLAGAHGPP 861

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G KG    RG +G  G  G PG+
Sbjct: 862 GPVGVAGLKGG---RGTQGAPGPTGFPGS 887



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 96/249 (38%), Gaps = 63/249 (25%)

Query: 83  NPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP 142
            P   + A   +    M G    +     PG +G  G  G+ G+ G +G+ G  G  G P
Sbjct: 298 GPHGPMGAPGPMGPAGMPGERGRSGPSGTPGKRGVPGSVGKPGSLGPLGLSGPSGYPGTP 357

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDM------------------GYPGPQG----------- 173
           G+ G PGP G+ G +G +G +G+                   G PG +G           
Sbjct: 358 GMKGQPGPTGVRGPQGPQGQRGETGHLGRSGPLGLGGPIGTDGGPGAKGPVGNLGPQGPS 417

Query: 174 -------------IPGDEGKRGPKGDMGYPG---------------------RIGLDGRD 199
                          G  G +G  GD+G PG                       G +G+ 
Sbjct: 418 GHLGPPGPPGPQGSTGQPGIKGQLGDVGLPGFKGEAGPKGEPGPPGSQGVIGPQGEEGKR 477

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G  G+PG  G PG  G  G  G  G PG DG+PG  G  G++G++GP G +G  G  G  
Sbjct: 478 GQRGDPGSVGPPGPVGERGASGNRGFPGADGLPGPKGAQGDRGISGPPGPKGSLGDPGRT 537

Query: 260 GTPAICAYK 268
           G P +   +
Sbjct: 538 GEPGLPGAR 546



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 72/146 (49%), Gaps = 24/146 (16%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYPGPQGI 174
            G++GE G  G  G +G  G +G PG  G PG  GIPG+    G+ GP+G+ G PG +G 
Sbjct: 636 AGERGEQGPPGVNGFQGLPGNQGPPGESGKPGDVGIPGELGAVGQIGPRGERGNPGERGE 695

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRD---------GLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G +GPK   G PG  G DG           G  G PGL G+PG  G+ G PG    
Sbjct: 696 LGPNGLQGPK---GIPGAPGPDGPKGSPGPPGAIGDAGPPGLQGMPGERGISGPPGPK-- 750

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRG 251
                  G  GT GEKG  G  GN G
Sbjct: 751 -------GERGTLGEKGSEGTAGNDG 769



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 97/240 (40%), Gaps = 90/240 (37%)

Query: 106 TKEYCPPGLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGPQGIPGD 156
           T E   PG+    GQ+G  G  GE+G         V GERGE+G PGV G    QG+PG+
Sbjct: 603 TGEQGSPGV---AGQRGPPGKDGEVGPAGPPGPSGVAGERGEQGPPGVNGF---QGLPGN 656

Query: 157 EGKRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIG------LDGRDGLPGE--- 204
           +G   P G+ G PG  GIPG+    G+ GP+G+ G PG  G      L G  G+PG    
Sbjct: 657 QG---PPGESGKPGDVGIPGELGAVGQIGPRGERGNPGERGELGPNGLQGPKGIPGAPGP 713

Query: 205 ------------------PGLDGIPGRNGMDGIPG------------KDGLPGKDGI--- 231
                             PGL G+PG  G+ G PG             +G  G DG    
Sbjct: 714 DGPKGSPGPPGAIGDAGPPGLQGMPGERGISGPPGPKGERGTLGEKGSEGTAGNDGARGS 773

Query: 232 ---------------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                                      PG+ GT G +G  GP G  G SG  G  G P +
Sbjct: 774 PGPVGPPGSAGPSGEKGEPGPKGPHGPPGSRGTPGSRGDPGPIGPTGFSGAPGPDGQPGV 833



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 6/96 (6%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+  QG         P G QG  G++G+IG++G +G  G  G++G  G  GP G +G  G
Sbjct: 1052 LIGSQGLPGPAG---PVGSQGGPGRRGDIGSRGPVGPPGAAGKRGLVGPQGPRGDKGDLG 1108

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMG 188
            D G+RG KG  G+ G QG+PG  G   ++G  G +G
Sbjct: 1109 DHGERGQKGHRGFTGLQGLPGPPGTTGEQGATGILG 1144


>gi|395840104|ref|XP_003792905.1| PREDICTED: collagen alpha-1(XXII) chain [Otolemur garnettii]
          Length = 1604

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/138 (45%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G +G  G KG  G  G  G +G PG +GPPG +G  G +G  GP G  G  G 
Sbjct: 1241 PGLPGPEGARGPPGFKGHTGDAGAPGPRGEPGAMGPPGREGSAGKDGDTGPAGPQGPQGQ 1300

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGL 225
            +G PG  G  G  GD+G PG +G  G  G  G PGL G       PG  G  G+PGK+G 
Sbjct: 1301 RGPPGKNGSPGSPGDVGPPGTVGQKGSKGESGSPGLPGFLGPRGPPGEPGEKGVPGKEGT 1360

Query: 226  PGKDGIPGTNGTNGEKGM 243
            PGK G PG+ G  G+ G+
Sbjct: 1361 PGKPGEPGSKGEQGDPGI 1378



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 79/155 (50%), Gaps = 28/155 (18%)

Query: 117 PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD-------EGKRGPKGDMGYP 169
           P G+KGE G  G +G+ G +G+ GA G VG PGP+G  GD       +G++G KG +G P
Sbjct: 477 PAGEKGEKGLHGPVGLPGPKGDTGATGPVGAPGPKGEKGDVGRGPFIQGEKGEKGSLGPP 536

Query: 170 GPQGIPGDEGKRGPKGDMG---YPGRIGLD------------------GRDGLPGEPGLD 208
           GP G  G +G RG  G++G    PG +G+                   G  G  GE G  
Sbjct: 537 GPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGHVGAPGLQGERGEKGTH 596

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           G  G  G+DG PGK G  G+ G PG  GT G +G 
Sbjct: 597 GEKGERGLDGFPGKPGQTGEQGRPGPPGTAGPQGQ 631



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 87/196 (44%), Gaps = 57/196 (29%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGV---------------------VGPPGPQ------ 151
            G KGE GA GE+G KG++G    PGV                      GPPG Q      
Sbjct: 1146 GSKGEPGADGEVGQKGDQGH---PGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGLPGKE 1202

Query: 152  ------------GIPGDEGKRG------------PKGDMGYPGPQGIPGDEGKRGPKGDM 187
                        GIPG+EGK G              G+ G PGP+G  G  G +G  GD 
Sbjct: 1203 GPPGPEGPSGIPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDA 1262

Query: 188  GYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G PG  G  G  G PG     G DG  G  G  G  G+ G PGK+G PG+ G  G  G  
Sbjct: 1263 GAPGPRGEPGAMGPPGREGSAGKDGDTGPAGPQGPQGQRGPPGKNGSPGSPGDVGPPGTV 1322

Query: 245  GPRGNRGKSGINGVPG 260
            G +G++G+SG  G+PG
Sbjct: 1323 GQKGSKGESGSPGLPG 1338



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 62/133 (46%), Gaps = 31/133 (23%)

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEP---GLDGIPGRNGMDGIPGKD 223
           GP G+PG +G+ G +G+ G PG+ GL G     GL G P   G  G+PG  G  G+ G+ 
Sbjct: 757 GPPGLPGSKGEPGGRGEDGLPGKPGLRGEVGEQGLAGRPGEKGAAGLPGAPGFPGLRGEK 816

Query: 224 GLPGKD---GIPGTNGTNGEKG----------------------MTGPRGNRGKSGINGV 258
           G PG+    G+PG  G  GEKG                      M G +G RG+ G  GV
Sbjct: 817 GDPGEKGELGLPGLKGDQGEKGEAGPAGPPGLPGTIPLFTPHPRMPGEQGPRGEKGDPGV 876

Query: 259 PGTPAICAYKRES 271
           PG P       ES
Sbjct: 877 PGEPGPQGRPGES 889



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 76/152 (50%), Gaps = 25/152 (16%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD-------EGKRGPKGDMGY 189
           GEKG  G+    GP G+PG +G  G  G +G PGP+G  GD       +G++G KG +G 
Sbjct: 479 GEKGEKGLH---GPVGLPGPKGDTGATGPVGAPGPKGEKGDVGRGPFIQGEKGEKGSLGP 535

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------PGKDGLPGKDGIPGT 234
           PG  G DG  G+ GEPG  G PG  G  G+                G  GL G+ G  GT
Sbjct: 536 PGPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGHVGAPGLQGERGEKGT 595

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           +G  GE+G+ G  G  G++G  G PG P    
Sbjct: 596 HGEKGERGLDGFPGKPGQTGEQGRPGPPGTAG 627



 Score = 42.7 bits (99), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 84/206 (40%), Gaps = 63/206 (30%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPP---------GPQGIPGDEGKRGPKGDMGYPG- 170
            KG+ G  G+ G +G  G+KG  G  GPP         G +G PG +G+ G KGD G+PG 
Sbjct: 1109 KGDKGLPGKPGREGAEGKKGDAGPPGPPGHPGVAGPQGSKGEPGADGEVGQKGDQGHPGV 1168

Query: 171  -----------------------PQG---------------------IPGDEGKRG---- 182
                                   P G                     IPG+EGK G    
Sbjct: 1169 PGFMGPPGNPGPPGADGIAGAAGPPGIQGLPGKEGPPGPEGPSGIPGIPGEEGKEGRDGK 1228

Query: 183  -----PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
                   G  G PG  G +G  G PG  G  G  G  G  G PG  G PG++G  G +G 
Sbjct: 1229 PGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDAGAPGPRGEPGAMGPPGREGSAGKDGD 1288

Query: 238  NGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  GP+G RG  G NG PG+P 
Sbjct: 1289 TGPAGPQGPQGQRGPPGKNGSPGSPG 1314



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 57/136 (41%), Gaps = 46/136 (33%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGI--------------------PG----------- 155
            +G  G  GERGEKGA G  G PGP G                     PG           
Sbjct: 940  RGPPGKDGERGEKGATGEEGRPGPSGPRGDPGAPGIPGPPGKGRDGEPGLRGSPGLPGPP 999

Query: 156  -DEGKRGPKGDMGYPGPQGIPG--------------DEGKRGPKGDMGYPGRIGLDGRDG 200
              +G RG  G  G PG +G PG              ++G +G +G  G+PG  G  G+DG
Sbjct: 1000 GTKGDRGTPGIPGSPGSRGDPGVGVAGPPGPSGPPGEKGSQGSRGLPGFPGPQGPAGQDG 1059

Query: 201  LPGEPGLDGIPGRNGM 216
             PG PG  G PG+ G+
Sbjct: 1060 APGNPGERGPPGKPGL 1075


>gi|301768032|ref|XP_002919440.1| PREDICTED: collagen alpha-1(XXIV) chain-like [Ailuropoda
           melanoleuca]
          Length = 528

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 93/202 (46%), Gaps = 46/202 (22%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEG---KRGPKGDMGY 168
           +GP+G  GE+G  G +G KG +G  G+ G   + G PGP+G+ GD G   + G +G++G 
Sbjct: 37  EGPVGLPGEVGITGSVGEKGLQGPPGSAGDRGLEGEPGPRGLQGDAGPPGEMGAEGNVGP 96

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------PGL 207
            G  G+ G+ G RG  G  G PG  G  G  GLPG                      PG 
Sbjct: 97  AGNVGVAGEPGLRGNPGGRGLPGEDGEKGETGLPGASGPLGGPGLMGPPGPEGIVGTPGQ 156

Query: 208 DGIPGRNGMDG-------------------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            G PG+ G  G                   +PG  G  G+ G PGT G+ G  G+ G  G
Sbjct: 157 RGRPGKKGYPGEDSTVLGPPGPRGEPGHVGLPGPRGATGQQGPPGTRGSPGRTGLAGSPG 216

Query: 249 NRGKSGINGVPGTPAICAYKRE 270
            RG  G +G+PG+P +   K E
Sbjct: 217 PRGAKGSSGLPGSPGVPGPKGE 238



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 91/211 (43%), Gaps = 52/211 (24%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG--- 164
           E  P GLQG  G  GE+GA+G +G  G  G  G PG+ G PG +G+PG++G++G  G   
Sbjct: 72  EPGPRGLQGDAGPPGEMGAEGNVGPAGNVGVAGEPGLRGNPGGRGLPGEDGEKGETGLPG 131

Query: 165 ------------------------DMGYPGPQGIPGDE---------------------- 178
                                     G PG +G PG++                      
Sbjct: 132 ASGPLGGPGLMGPPGPEGIVGTPGQRGRPGKKGYPGEDSTVLGPPGPRGEPGHVGLPGPR 191

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
              G++GP G  G PGR GL G  G  G  G  G+PG  G+ G  G+ GLPG+ GI G  
Sbjct: 192 GATGQQGPPGTRGSPGRTGLAGSPGPRGAKGSSGLPGSPGVPGPKGEQGLPGQPGIQGKR 251

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G  G +G  GP G  G  G  G  G   I  
Sbjct: 252 GHQGAQGDQGPCGEPGLKGQPGPEGDAGIVG 282



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 85/198 (42%), Gaps = 45/198 (22%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           +G +G  GE+G+ G  GEKG   + GPPG  G  G EG+ GP+G  G  GP G  G EG 
Sbjct: 37  EGPVGLPGEVGITGSVGEKG---LQGPPGSAGDRGLEGEPGPRGLQGDAGPPGEMGAEGN 93

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI--------------------- 219
            GP G++G  G  GL G  G  G PG DG  G  G+ G                      
Sbjct: 94  VGPAGNVGVAGEPGLRGNPGGRGLPGEDGEKGETGLPGASGPLGGPGLMGPPGPEGIVGT 153

Query: 220 PGKDGLPGKDGIPGTN-------------------GTNGEKGMTGPRGNRGKSGINGVPG 260
           PG+ G PGK G PG +                   G  G  G  GP G RG  G  G+ G
Sbjct: 154 PGQRGRPGKKGYPGEDSTVLGPPGPRGEPGHVGLPGPRGATGQQGPPGTRGSPGRTGLAG 213

Query: 261 TPAICAYKRESCSLLPNS 278
           +P     K    S LP S
Sbjct: 214 SPGPRGAK--GSSGLPGS 229



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 72/148 (48%), Gaps = 25/148 (16%)

Query: 124 IGAKGEMGVKGERGEKGAPGV----------------VGPPGPQGIPGDEGKRGPKGDMG 167
           +G  G+   +G  G+KG PG                 VG PGP+G     G++GP G  G
Sbjct: 151 VGTPGQ---RGRPGKKGYPGEDSTVLGPPGPRGEPGHVGLPGPRGA---TGQQGPPGTRG 204

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            PG  G+ G  G RG KG  G PG  G+    G  GLPG+PG+ G  G  G  G  G  G
Sbjct: 205 SPGRTGLAGSPGPRGAKGSSGLPGSPGVPGPKGEQGLPGQPGIQGKRGHQGAQGDQGPCG 264

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            PG  G PG  G  G  G++GP+G  G+
Sbjct: 265 EPGLKGQPGPEGDAGIVGISGPKGPIGQ 292



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 6/107 (5%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           V + G   +T +  PPG +G  G+ G  G+ G  G KG  G  G+PGV GP G QG+PG 
Sbjct: 185 VGLPGPRGATGQQGPPGTRGSPGRTGLAGSPGPRGAKGSSGLPGSPGVPGPKGEQGLPGQ 244

Query: 157 ---EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
              +GKRG +G  G  GP G PG +G+ GP+GD G    +G+ G  G
Sbjct: 245 PGIQGKRGHQGAQGDQGPCGEPGLKGQPGPEGDAGI---VGISGPKG 288



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 56/104 (53%), Gaps = 6/104 (5%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPKGDMGYPGP 171
           +G  G  GA G+ G  G RG  G  G+ G PGP+      G+PG  G  GPKG+ G PG 
Sbjct: 185 VGLPGPRGATGQQGPPGTRGSPGRTGLAGSPGPRGAKGSSGLPGSPGVPGPKGEQGLPGQ 244

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            GI G  G +G +GD G  G  GL G+ G  G+ G+ GI G  G
Sbjct: 245 PGIQGKRGHQGAQGDQGPCGEPGLKGQPGPEGDAGIVGISGPKG 288


>gi|47778921|ref|NP_001849.2| collagen alpha-1(XIX) chain precursor [Homo sapiens]
 gi|68840003|sp|Q14993.3|COJA1_HUMAN RecName: Full=Collagen alpha-1(XIX) chain; AltName: Full=Collagen
           alpha-1(Y) chain; Flags: Precursor
 gi|109731009|gb|AAI13363.1| Collagen, type XIX, alpha 1 [Homo sapiens]
 gi|109731011|gb|AAI13365.1| Collagen, type XIX, alpha 1 [Homo sapiens]
 gi|119569215|gb|EAW48830.1| collagen, type XIX, alpha 1, isoform CRA_c [Homo sapiens]
          Length = 1142

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 91/200 (45%), Gaps = 58/200 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  GP GQKGE    GE   KGE+G++G PGV+G                       G 
Sbjct: 470 PGSVGPKGQKGE---PGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQ 526

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK----------------GDMGYPGRIG 194
           QG  G  G RGP GD+G PG  GIPG +G +G K                G+ G PG+  
Sbjct: 527 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKS- 585

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGM 243
                 LPGEPGLDG PG  G  G  G+ GLPG             GIPG  G  G  G 
Sbjct: 586 ------LPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGE 639

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            G +G RG  G+ G PGTP 
Sbjct: 640 PGIQGPRGLPGLPGTPGTPG 659



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 70/147 (47%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG----------------EK 139
           L   QG   S     PPG    +G  GE G  G+ G+KGE+G                E 
Sbjct: 523 LKGQQGSAGSMGPRGPPG---DVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEA 579

Query: 140 GAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPG---------PQGI--PGDEGKRGPKGD 186
           G PG  + G PG  G PG  G RGPKG+ G PG         PQGI  PG  G +GP G+
Sbjct: 580 GPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGE 639

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG+PGR
Sbjct: 640 PGIQGPRGLPGLPGTPGTPGNDGVPGR 666



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 82/196 (41%), Gaps = 62/196 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  G +G KG+ G  GE   KGE+G++G PGV+G                       G 
Sbjct: 467 PGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQ 526

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK-------------------GDMG--Y 189
           QG  G  G RGP GD+G PG  GIPG +G +G K                   G  G   
Sbjct: 527 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKSL 586

Query: 190 PGRIGLDGRDGLPGE---------PGLDG-----------IPGRNGMDGIPGKDGLPGKD 229
           PG  GLDG  G PG          PG+ G           IPGR G  G  G+ G+ G  
Sbjct: 587 PGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGEPGIQGPR 646

Query: 230 GIPGTNGTNGEKGMTG 245
           G+PG  GT G  G  G
Sbjct: 647 GLPGLPGTPGTPGNDG 662



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 78/145 (53%), Gaps = 15/145 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G +G  GVKG+RG  G PG+ G       PGP G+PG+ G+RGP GD+G+PGP+
Sbjct: 860 GAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGPE 919

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                    GP G  G  G+ G+ G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 920 ---------GPSGKPGINGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGDRGSQGERGKP 970

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G  GP GN+G  G  G
Sbjct: 971 GLTGMKGAIGPMGPPGNKGSMGSPG 995



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 78/168 (46%), Gaps = 33/168 (19%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A G  G KGE G  G PG VGP G +G PG+   +G KGD G PG  G  G +G+ G  G
Sbjct: 454 AGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPG 513

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI-------------- 231
             G  G  GL G+ G  G  G  G PG  G+   PG+ G+PGK GI              
Sbjct: 514 PPGLIGSPGLKGQQGSAGSMGPRGPPGDVGL---PGEHGIPGKQGIKGEKGDPGGIIGPP 570

Query: 232 ----------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                           PG  G +G  G  GPRG +G+ G+ GV G+P 
Sbjct: 571 GLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPG 618



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 61/131 (46%), Gaps = 36/131 (27%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
           PG  G+PG EG  G KGD G  GP GI G               + G+RGP GD+G+PG 
Sbjct: 859 PGAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGP 918

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGN 249
            G  G+ G                  I GKDG+PG  GI   PG  G  GE+G  G  G+
Sbjct: 919 EGPSGKPG------------------INGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGD 960

Query: 250 RGKSGINGVPG 260
           RG  G  G PG
Sbjct: 961 RGSQGERGKPG 971



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 92/239 (38%), Gaps = 80/239 (33%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGD 165
           PG  G  G++G  G+KGE G KGE+GEKG P + G  G  G+ GD       G +G KGD
Sbjct: 321 PGFPGQKGEQGFEGSKGETGEKGEQGEKGDPALAGLNGENGLKGDLGPHGPPGPKGEKGD 380

Query: 166 ------------MGYPGPQGIPGDEGKRGP------------------------------ 183
                       +G  GPQG PG EG+RG                               
Sbjct: 381 TGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLGG 440

Query: 184 -----------------KGDMG------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                            KGD G      +PG +G  G+ G PGEP   G  G  G  G+ 
Sbjct: 441 YYNKDNKGNDEHEAGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVI 500

Query: 221 GKDGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G+ G+          G PG  G  G  G  GPRG  G  G+ G  G P     K E
Sbjct: 501 GSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGE 559



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 25/142 (17%)

Query: 68  EIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEY-----CPPGLQGPIGQKG 122
           EI + +  +Q+   N    W+ A++      M  +  + +E      C P        KG
Sbjct: 244 EISDTKCPEQDGFGNIASSWVTAHAS----KMSSYLPAKQELKDQCQCIP-------NKG 292

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           E G  G  G  G++G KG PG  G  G  G PG       KG+ G+ G +G  G++G++G
Sbjct: 293 EAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQ------KGEQGFEGSKGETGEKGEQG 346

Query: 183 PKGDMGYPGRIGLDGRDGLPGE 204
            KGD   P   GL+G +GL G+
Sbjct: 347 EKGD---PALAGLNGENGLKGD 365



 Score = 42.7 bits (99), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G PG    PG  G++G KG+   PG  GL G  G PG+ G  G  G  G  G  G+
Sbjct: 291 KGEAGLPG---APGSPGQKGHKGE---PGENGLHGAPGFPGQKGEQGFEGSKGETGEKGE 344

Query: 223 DGLPGKDGIPGTNGTNGEKG 242
            G  G   + G NG NG KG
Sbjct: 345 QGEKGDPALAGLNGENGLKG 364



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G++G+ G  G+ G +GERG+ G  G+ G  GP G PG+      KG MG PG 
Sbjct: 943 PGDRGPKGERGDQGIPGDRGSQGERGKPGLTGMKGAIGPMGPPGN------KGSMGSPGH 996

Query: 172 Q 172
           Q
Sbjct: 997 Q 997



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 34/69 (49%)

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE GL G PG  G  G  G+ G  G  G PG  G  GE+G  G +G  G+ G  G  G P
Sbjct: 292 GEAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQKGEQGFEGSKGETGEKGEQGEKGDP 351

Query: 263 AICAYKRES 271
           A+     E+
Sbjct: 352 ALAGLNGEN 360


>gi|56711254|ref|NP_114474.1| collagen alpha-1(III) chain precursor [Rattus norvegicus]
 gi|83301602|sp|P13941.3|CO3A1_RAT RecName: Full=Collagen alpha-1(III) chain; Flags: Precursor
 gi|56268836|gb|AAH87039.1| Collagen, type III, alpha 1 [Rattus norvegicus]
 gi|149046235|gb|EDL99128.1| procollagen, type III, alpha 1 [Rattus norvegicus]
          Length = 1463

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/152 (44%), Positives = 77/152 (50%), Gaps = 27/152 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---------------KGERGEKGAPGVVG------PPGP 150
           PG  G  GQ+GE G +G  G                KGE G  G PG  G      PPGP
Sbjct: 358 PGSNGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLLGARGPPGP 417

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G  G  G+RGP G+ G  G +G PG  G+RG  G  G PG  G DG+DG PGEPG +G+
Sbjct: 418 AGANGAPGQRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGV 477

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           PG       PG+ G PG  G  G NG  GEKG
Sbjct: 478 PGN------PGERGAPGFRGPAGPNGAPGEKG 503



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 77/154 (50%), Gaps = 18/154 (11%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGDMGYPGPQ 172
           GAKGE+G  G  G  G+PG  G PGPQG  G +G             +G  G  G PG  
Sbjct: 347 GAKGEVGPAGSPGSNGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAP 406

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDG---RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G+ G  G  GP G  G PG+ G  G   ++G  GEPG  G  G  G  GIPG  G  GKD
Sbjct: 407 GLLGARGPPGPAGANGAPGQRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKD 466

Query: 230 GIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
           G PG  G NG  G  G RG    RG +G NG PG
Sbjct: 467 GSPGEPGANGVPGNPGERGAPGFRGPAGPNGAPG 500



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 89/206 (43%), Gaps = 57/206 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
           PGL+G  G  G+ GA G MG +G  GE+G PG+   PG  G  G++G RG          
Sbjct: 280 PGLKGENGLPGDNGAPGPMGPRGAPGERGRPGL---PGAAGARGNDGARGSDGQPGPPGP 336

Query: 164 ----------------GDMGYPGPQGIPGDEGKRGP---------------------KGD 186
                           G  G PG  G PG  G+ GP                     KG+
Sbjct: 337 PGTAGFPGSPGAKGEVGPAGSPGSNGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGE 396

Query: 187 MG---YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           MG    PG  GL G  G PG  G +G PG+ G  G PGK+G  G+ G  G  G  G  G+
Sbjct: 397 MGPAGIPGAPGLLGARGPPGPAGANGAPGQRGPSGEPGKNGAKGEPGARGERGEAGSPGI 456

Query: 244 TGPRGNRGKS------GINGVPGTPA 263
            GP+G  GK       G NGVPG P 
Sbjct: 457 PGPKGEDGKDGSPGEPGANGVPGNPG 482



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 82/199 (41%), Gaps = 48/199 (24%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PGD G  GP G  G PG
Sbjct: 246 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGDNGAPGPMGPRGAPG 305

Query: 171 PQ---GIPGDEGKR---------------------------GPKGDMGYPGRIGLDGRDG 200
            +   G+PG  G R                           G KG++G  G  G +G  G
Sbjct: 306 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGSPG 365

Query: 201 LPGEPGLDGIPGRN------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             GEPG  G  G                    G  GIPG  GL G  G PG  G NG  G
Sbjct: 366 QRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLLGARGPPGPAGANGAPG 425

Query: 243 MTGPRGNRGKSGINGVPGT 261
             GP G  GK+G  G PG 
Sbjct: 426 QRGPSGEPGKNGAKGEPGA 444



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 82/186 (44%), Gaps = 39/186 (20%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 227 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 286

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  GD G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 287 GLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 346

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG+NG+ G++G  GP+G+                  +G+ G  G+PG P
Sbjct: 347 GAKGEVGPAGSPGSNGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAP 406

Query: 263 AICAYK 268
            +   +
Sbjct: 407 GLLGAR 412



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 88/173 (50%), Gaps = 30/173 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G+ G+ GAKGE G +GERGE G+PG+ GP G  G  G  G+ G  G  G PG 
Sbjct: 424 PGQRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGVPGNPGE 483

Query: 172 QGIPGDEGKRGPKGDMGYPGRIG---------LDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           +G PG    RGP G  G PG  G           G  G+ GEPG DG PG  G+ G+PG 
Sbjct: 484 RGAPG---FRGPAGPNGAPGEKGPAGERGGPGPAGPRGVAGEPGRDGTPGGPGIRGMPGS 540

Query: 223 DGLPGKDGIPGTNGTNGEK------------------GMTGPRGNRGKSGING 257
            G PG DG PG  G+ GE                   G  GP+GN G  G NG
Sbjct: 541 PGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNG 593



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 89/236 (37%), Gaps = 81/236 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--- 165
           PG+ GP G+ G+ G+ GE G   V G  GE+GAPG  GP GP G PG++G  G +G    
Sbjct: 454 PGIPGPKGEDGKDGSPGEPGANGVPGNPGERGAPGFRGPAGPNGAPGEKGPAGERGGPGP 513

Query: 166 ------MGYPGPQGIPGDEG---------------KRGPKGD------------------ 186
                  G PG  G PG  G               K GP G                   
Sbjct: 514 AGPRGVAGEPGRDGTPGGPGIRGMPGSPGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQ 573

Query: 187 ---MGYPGRIGLDGRDGLPGE---------------------------------PGLDGI 210
              MG+PG  G DG  G  GE                                  G  G 
Sbjct: 574 PGVMGFPGPKGNDGAPGKNGERGGPGGPGLPGPAGKNGETGPQGPPGPTGAPGDKGDAGP 633

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           PG  G+ GIPG  G PG++G PG  G  GE G  G  G +G SG  G  G P    
Sbjct: 634 PGPQGLQGIPGTSGPPGENGKPGEPGPKGEAGAPGVPGGKGDSGAPGERGPPGTAG 689



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 226 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 285

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 286 NGLPGDNGAPG 296



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 38/75 (50%), Gaps = 12/75 (16%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KGD G PGPQG+             G PG  G  G +G PGEPG  G  G  G+ G  G 
Sbjct: 628 KGDAGPPGPQGL------------QGIPGTSGPPGENGKPGEPGPKGEAGAPGVPGGKGD 675

Query: 223 DGLPGKDGIPGTNGT 237
            G PG+ G PGT GT
Sbjct: 676 SGAPGERGPPGTAGT 690



 Score = 39.3 bits (90), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 71/187 (37%), Gaps = 72/187 (38%)

Query: 146  GPPGP---QGIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRGP---- 183
            GPPGP    G PG+ G  GPKGD G PG +G               I G  G RG     
Sbjct: 902  GPPGPAGNSGSPGNPGVAGPKGDAGQPGEKGPPGAQGPPGSPGPLGIAGLTGARGLAGPP 961

Query: 184  --------------KGDMGYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMD 217
                          KG+ G PG  G +G              G  GEPG DG PG    D
Sbjct: 962  GMPGPRGSPGPQGIKGESGKPGASGHNGERGPPGPQGLPGQPGTAGEPGRDGNPG---SD 1018

Query: 218  GIPGKDGLPGKDGIPGTNGT---------------------NGEKGMTGPRGNRGKSGIN 256
            G PG+DG PG  G  G NG+                     NG++G TGP G  G  G  
Sbjct: 1019 GQPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKNGDRGETGPAGPSGAPGPA 1078

Query: 257  GVPGTPA 263
            G  G P 
Sbjct: 1079 GARGAPG 1085


>gi|355786042|gb|EHH66225.1| Alpha-1 type II collagen [Macaca fascicularis]
          Length = 1488

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 92/198 (46%), Gaps = 33/198 (16%)

Query: 97   VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
               +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 816  AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 875

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
            QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 876  QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 935

Query: 187  MGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G PGR    GL G  G PGE G  G  G +G DG PG  GL G+ GI G  G  GE+G 
Sbjct: 936  SGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 995

Query: 244  TGPRGNRGKSGINGVPGT 261
             G  G  G+ G  G PG 
Sbjct: 996  PGLPGPSGEPGKQGAPGA 1013



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 448 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 507

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 508 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 567

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 568 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 627

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 628 GLRGLPG 634



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 84/187 (44%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 802 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 861

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 862 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 921

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ 
Sbjct: 922 GPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQR 981

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 982 GIVGLPG 988



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 376 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 435

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 436 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 495

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 496 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 552

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 553 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 581



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 689 EAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGASGPAGPPGAQGPPG 748

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 749 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 808

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 809 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 859

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 860 DAGAPGPQGPSGAPG 874



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 751 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 804

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 805 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 861

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 862 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 904



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 88/213 (41%), Gaps = 57/213 (26%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 852  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 911

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 912  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGP 971

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 972  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1031

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                 ++G PG +G  G  G  G +G+RG++G 
Sbjct: 1032 AGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 1064



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 523 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 582

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 583 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 639

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 640 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 699

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 700 GERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGAS 735



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 67/141 (47%), Gaps = 27/141 (19%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------- 181
           ++G  GE+GA G+ GP            +G +GD+G  GP+G PG +G R          
Sbjct: 749 LQGMPGERGAAGIAGP------------KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPG 796

Query: 182 -----GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                G KG++G PG  G  G  G PGE G  G PG  G  G PG DG PG  G  G  G
Sbjct: 797 PAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAG 856

Query: 237 TNGEKGMTGPRGNRGKSGING 257
             G+ G  GP+G  G  G  G
Sbjct: 857 QKGDAGAPGPQGPSGAPGPQG 877



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 85/199 (42%), Gaps = 30/199 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 749 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 808

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            PG  G  G +G PG+ G+ GP G  G+ GP G  G  G +G +G+ G  G  G  G  G
Sbjct: 809 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 868

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------------TNGEKGMTG 245
             G PG  G  G  G  G  G  G PG  G PG  G                 G  G  G
Sbjct: 869 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDG 928

Query: 246 PRGNRGKSGINGVPGTPAI 264
           P+G RG SG  G  G P +
Sbjct: 929 PKGARGDSGPPGRAGDPGL 947



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 74/183 (40%), Gaps = 51/183 (27%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----------- 181
           KGE G  GA G  G  GP+G PG  G  GP G  G PG  GIPG +G             
Sbjct: 375 KGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGF 434

Query: 182 ----------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGMD----- 217
                           GPKG  G PG  G  G  G  GEP   G  G PG  G +     
Sbjct: 435 PGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGA 494

Query: 218 ----------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                           G PG  G PG+DG+ G  G  GE+G +G  G +G +G  G PG 
Sbjct: 495 RGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGE 554

Query: 262 PAI 264
           P +
Sbjct: 555 PGL 557



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 83/208 (39%), Gaps = 69/208 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
            PGLQGP G  GE         KGE G+ G  G  GPPGPQG+ G  G      +RG +G 
Sbjct: 945  PGLQGPAGPPGE---------KGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 995

Query: 166  MGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGI 210
             G PGP G PG +G  G  GD                G PGR G          PG DG 
Sbjct: 996  PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADGP 1046

Query: 211  PGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTNGE 240
            PGR+G  G+                               G  G  G  G  G +G  G 
Sbjct: 1047 PGRDGAAGVKGDRGETGAVGAPGSPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGA 1106

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1107 RGIQGPQGPRGDKGEAGEPGERGLKGHR 1134



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 83/168 (49%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  G +G+PG  G  GPKG              
Sbjct: 688 GEAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGASGPAGPPGAQGPP 747

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 748 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 807

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 808 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 855



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 90/226 (39%), Gaps = 84/226 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------KGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+ G             +G+ 
Sbjct: 598 GQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQ 657

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QG+PG+ G  G   P+G+ G+PG        GL 
Sbjct: 658 GAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGSQGLQ 717

Query: 197 GRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GKD 223
           G  GLPG PG D                     G+PG  G  GI             G +
Sbjct: 718 GARGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 777

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 778 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 823



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 285 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 344

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 345 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 404

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 405 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 461

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 462 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 492



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 80/216 (37%), Gaps = 69/216 (31%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            G+ G+ G +G  G +G RG  G PG+ G  G +G PG +G +G  G  G  G  G PG+
Sbjct: 258 AGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGE 317

Query: 178 EGKRGPKGDMGYPGR--------------------------------------------- 192
            G  GP G  G PG                                              
Sbjct: 318 NGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGE 377

Query: 193 ------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------- 236
                  G +G  G  GEPG  G PG  G  G PG DG+PG  G  G  G          
Sbjct: 378 AGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGP 437

Query: 237 --TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
               G +G TGP G +G++      G P I  +K E
Sbjct: 438 RGPPGPQGATGPLGPKGQT------GEPGIAGFKGE 467


>gi|355564168|gb|EHH20668.1| Alpha-1 type II collagen [Macaca mulatta]
          Length = 1488

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 92/198 (46%), Gaps = 33/198 (16%)

Query: 97   VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
               +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 816  AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 875

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
            QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 876  QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 935

Query: 187  MGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G PGR    GL G  G PGE G  G  G +G DG PG  GL G+ GI G  G  GE+G 
Sbjct: 936  SGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 995

Query: 244  TGPRGNRGKSGINGVPGT 261
             G  G  G+ G  G PG 
Sbjct: 996  PGLPGPSGEPGKQGAPGA 1013



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 448 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 507

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 508 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 567

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 568 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 627

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 628 GLRGLPG 634



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 84/187 (44%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 802 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 861

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 862 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 921

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ 
Sbjct: 922 GPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQR 981

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 982 GIVGLPG 988



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 376 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 435

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 436 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 495

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 496 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 552

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 553 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 581



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 689 EAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGASGPAGPPGAQGPPG 748

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 749 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 808

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 809 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 859

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 860 DAGAPGPQGPSGAPG 874



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 751 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 804

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 805 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 861

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 862 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 904



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 88/213 (41%), Gaps = 57/213 (26%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 852  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 911

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 912  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGP 971

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 972  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1031

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                 ++G PG +G  G  G  G +G+RG++G 
Sbjct: 1032 AGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 1064



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 523 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 582

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 583 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 639

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 640 GAAGPPGPAGPAGERGKQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 699

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 700 GERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGAS 735



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 67/141 (47%), Gaps = 27/141 (19%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------- 181
           ++G  GE+GA G+ GP            +G +GD+G  GP+G PG +G R          
Sbjct: 749 LQGMPGERGAAGIAGP------------KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPG 796

Query: 182 -----GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                G KG++G PG  G  G  G PGE G  G PG  G  G PG DG PG  G  G  G
Sbjct: 797 PAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAG 856

Query: 237 TNGEKGMTGPRGNRGKSGING 257
             G+ G  GP+G  G  G  G
Sbjct: 857 QKGDAGAPGPQGPSGAPGPQG 877



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 85/199 (42%), Gaps = 30/199 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 749 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 808

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            PG  G  G +G PG+ G+ GP G  G+ GP G  G  G +G +G+ G  G  G  G  G
Sbjct: 809 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 868

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------------TNGEKGMTG 245
             G PG  G  G  G  G  G  G PG  G PG  G                 G  G  G
Sbjct: 869 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDG 928

Query: 246 PRGNRGKSGINGVPGTPAI 264
           P+G RG SG  G  G P +
Sbjct: 929 PKGARGDSGPPGRAGDPGL 947



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 74/183 (40%), Gaps = 51/183 (27%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----------- 181
           KGE G  GA G  G  GP+G PG  G  GP G  G PG  GIPG +G             
Sbjct: 375 KGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGF 434

Query: 182 ----------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGMD----- 217
                           GPKG  G PG  G  G  G  GEP   G  G PG  G +     
Sbjct: 435 PGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGA 494

Query: 218 ----------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                           G PG  G PG+DG+ G  G  GE+G +G  G +G +G  G PG 
Sbjct: 495 RGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGE 554

Query: 262 PAI 264
           P +
Sbjct: 555 PGL 557



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 83/208 (39%), Gaps = 69/208 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
            PGLQGP G  GE         KGE G+ G  G  GPPGPQG+ G  G      +RG +G 
Sbjct: 945  PGLQGPAGPPGE---------KGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 995

Query: 166  MGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGI 210
             G PGP G PG +G  G  GD                G PGR G          PG DG 
Sbjct: 996  PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADGP 1046

Query: 211  PGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTNGE 240
            PGR+G  G+                               G  G  G  G  G +G  G 
Sbjct: 1047 PGRDGAAGVKGDRGETGAVGAPGSPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGA 1106

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1107 RGIQGPQGPRGDKGEAGEPGERGLKGHR 1134



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 83/168 (49%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  G +G+PG  G  GPKG              
Sbjct: 688 GEAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGASGPAGPPGAQGPP 747

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 748 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 807

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 808 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 855



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 89/226 (39%), Gaps = 84/226 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------KGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+ G             +G  
Sbjct: 598 GQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGKQ 657

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QG+PG+ G  G   P+G+ G+PG        GL 
Sbjct: 658 GAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGSQGLQ 717

Query: 197 GRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GKD 223
           G  GLPG PG D                     G+PG  G  GI             G +
Sbjct: 718 GARGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 777

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 778 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 823



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 285 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 344

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 345 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 404

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 405 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 461

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 462 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 492



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 71/173 (41%), Gaps = 39/173 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPG------------ 155
            P G  GP G +G  G +G +G+ G+RGE+G PG+ GP   PG QG PG            
Sbjct: 965  PSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVG 1024

Query: 156  ---DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------------------- 193
                 G  G  G  G PG  G PG +G  G KGD G  G +                   
Sbjct: 1025 PPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGSPGPPGSPGPAGPTG 1084

Query: 194  --GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
              G  G  G  G  G  G  G  G+ G  G  G  G+ G PG  G  G +G T
Sbjct: 1085 KQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFT 1137



 Score = 39.7 bits (91), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 80/216 (37%), Gaps = 69/216 (31%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            G+ G+ G +G  G +G RG  G PG+ G  G +G PG +G +G  G  G  G  G PG+
Sbjct: 258 AGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGE 317

Query: 178 EGKRGPKGDMGYPGR--------------------------------------------- 192
            G  GP G  G PG                                              
Sbjct: 318 NGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGE 377

Query: 193 ------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------- 236
                  G +G  G  GEPG  G PG  G  G PG DG+PG  G  G  G          
Sbjct: 378 AGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGP 437

Query: 237 --TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
               G +G TGP G +G++      G P I  +K E
Sbjct: 438 RGPPGPQGATGPLGPKGQT------GEPGIAGFKGE 467


>gi|355701099|gb|EHH29120.1| hypothetical protein EGK_09458 [Macaca mulatta]
          Length = 1712

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 94/169 (55%), Gaps = 15/169 (8%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     +  PPG +G  G  G  G KG+ G+ G  G+   PG+ GPPG  G PG  G+ 
Sbjct: 794 GFKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGASGQ---PGLSGPPGQHGFPGAPGQE 850

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------LPGEPGLDGIPGRN 214
           GP G  G PG +G+PGD   RG  GD+G PG +G+ G  G      L GE G  G PG  
Sbjct: 851 GPLGLPGIPGLEGLPGD---RGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGHPGSPGFK 907

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
           G+DG+PG  GL G+ G PG +G  G    KG  G  G++G++G  G+PG
Sbjct: 908 GIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPG 956



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 85/149 (57%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ G  G  G+ G  G  G++G  G+ G PG +G+PGD   RG  GD+G PGP
Sbjct: 823 PGLPGASGQPGLSGPPGQHGFPGAPGQEGPLGLPGIPGLEGLPGD---RGDPGDIGAPGP 879

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
              +G+ GD G  G  G+ G+PG  G  G DG+PG PGL G  G  GMDG  G  GL G+
Sbjct: 880 VGMKGVSGDRGDAGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGR 939

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG+ G  G  G+ G +G  G+ G  G
Sbjct: 940 PGFPGSKGEAGFFGIPGLKGLAGEPGFKG 968



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 81/151 (53%), Gaps = 6/151 (3%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           + G +G+ GV G+ G KG PG  GPPG +G  G  G  G KG  G PG  G PG     G
Sbjct: 780 QPGPRGDAGVPGQPGFKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGASGQPG---LSG 836

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           P G  G+PG  G +G  GLPG PGL+G+PG     G PG  G PG  G+ G +G  G+ G
Sbjct: 837 PPGQHGFPGAPGQEGPLGLPGIPGLEGLPGDR---GDPGDIGAPGPVGMKGVSGDRGDAG 893

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           + G RG+ G  G  G+ G P     K E  S
Sbjct: 894 LAGERGHPGSPGFKGIDGMPGTPGLKGERGS 924



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 86/158 (54%), Gaps = 14/158 (8%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK----RGPKGDMGYPGPQGIPG 176
            KGE G +G MG+KG  G KG  G+ G PG  GIPG  G+    +G KGD+G PG  G+PG
Sbjct: 990  KGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGAPGIPGLPG 1049

Query: 177  DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-------IPGKDGLPGKD 229
              G  GP G  G+PG IG  G  G PG  GL G  G  G  G       +PG+ GL G+ 
Sbjct: 1050 FPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGPTGDFGDIGDTINLPGRPGLKGEQ 1109

Query: 230  ---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
               GIPG  G  GEKG  G  G  G +G+ GV G P +
Sbjct: 1110 GTAGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGL 1147



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 106/224 (47%), Gaps = 37/224 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G  G  G  G  G  G  G+ G +G PGV G      +PG++G RG +G MG  GP
Sbjct: 1307 PGSKGDAGNPGAPGTPGTKGWAGDSGPQGRPGVFG------LPGEKGPRGEQGFMGNTGP 1360

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-------EPGLDGIPGRNGMDGIPGK-- 222
             G  GD G +GPKGD G+PG  G+ G  G+ G        PG  G  GR G  G PG+  
Sbjct: 1361 AGAVGDRGPKGPKGDPGFPGAPGIVGAPGIAGIPQKIAIPPGTVGPQGRRGPPGAPGEMG 1420

Query: 223  ----------DGLPGKDGIPGTNGTN------GEKGMTGPRGNRGKSGINGVPGTPAICA 266
                       G PGK G  G  G +      G++G  G +G  G+ G  G PG+P +  
Sbjct: 1421 PQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPVGHQGPIGQEGAPGRPGSPGLPG 1480

Query: 267  YKRESCS----LLPNSETSQLLIPPTIVGSEHIFSSSPIVVREG 306
                S S    L+ +S+T Q  + P  VG   ++S   ++  EG
Sbjct: 1481 MPGRSVSIGYLLVKHSQTEQEPMCP--VGMNKLWSGYSLLYFEG 1522



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 81/168 (48%), Gaps = 21/168 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+G  G  G  G KG  G KG  G+ G PG+ G  G QG PG +G+ G  G  G PG 
Sbjct: 1103 PGLKGEQGTAGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGS 1162

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
            QG PG  G  G KGD G+PG  GL G  GL G  GL G+PG  G  G PG D        
Sbjct: 1163 QGEPGRIGLPGGKGDDGWPGIAGLPGFPGLRGIRGLHGLPGTKGFPGSPGADIHGDPGFP 1222

Query: 224  -------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                          LPG  G+PG  G  G  G  GP G+ G  G  G+
Sbjct: 1223 GPPGDRGDPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGLQGFPGI 1270



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 85/175 (48%), Gaps = 20/175 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP+G  G  G +G  G +G+ G+ GAPG VG  G  G  GD G  G +G  G PG 
Sbjct: 847  PGQEGPLGLPGIPGLEGLPGDRGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGHPGSPGF 906

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            +GI G  G  G KG+ G PG  G  G  GL G PG  G  G  G  GIPG  GL G+ G 
Sbjct: 907  KGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGF 966

Query: 232  PGTNG-----------------TNGEKGMTGP---RGNRGKSGINGVPGTPAICA 266
             G+ G                   GEKG  GP   +G  G  GI G+PG P +  
Sbjct: 967  KGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSG 1021



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 96/207 (46%), Gaps = 52/207 (25%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE-------------KGAPGVVGPPGPQGIPGDEG- 158
            G  G IG +G+ GA G  G+ GE G               G PG+ G  G  GIPG +G 
Sbjct: 1061 GFPGFIGSRGDKGAPGRAGLYGEIGPTGDFGDIGDTINLPGRPGLKGEQGTAGIPGLKGF 1120

Query: 159  --KRGPKGDMGYP------GPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGE 204
              ++G +GD+G+P      G QG PG +G+       GP G  G PGRIGL G  G  G 
Sbjct: 1121 FGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQGEPGRIGLPGGKGDDGW 1180

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------------------------GE 240
            PG+ G+PG  G+ GI G  GLPG  G PG+ G +                        G 
Sbjct: 1181 PGIAGLPGFPGLRGIRGLHGLPGTKGFPGSPGADIHGDPGFPGPPGDRGDPGDANTLPGP 1240

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAY 267
             G+ G +G +G  G  G PG+P +  +
Sbjct: 1241 VGVPGQKGEQGAPGERGPPGSPGLQGF 1267



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 85/164 (51%), Gaps = 33/164 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMG----VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           PGL G  G +G  G KG+ G     +G+   +G PG+ GP G  GI G+ G++G KGD G
Sbjct: 462 PGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGINGEPGRKGDKGDPG 521

Query: 168 ------YPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGL---DGIPGRNG 215
                 +PG +G+PG+ G  GPKG  G    I   G  G+ G+PG PG+   DG PGRNG
Sbjct: 522 QHGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRNG 581

Query: 216 M--------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           +               G PG  G P   GIPGT GT GE G  G
Sbjct: 582 LDGFPGLPGPPGDGIKGPPGDAGYP---GIPGTKGTPGEMGPPG 622



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 90/202 (44%), Gaps = 54/202 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERG---------------------EKGAPGV---VGPP 148
            G  GP+G KG  G +G+ G+ GERG                     E+G+PG+    G P
Sbjct: 875  GAPGPVGMKGVSGDRGDAGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMP 934

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------------- 186
            G +G PG  G +G  G  G PG +G+ G+ G +G +GD                      
Sbjct: 935  GLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPIILPGMKDIKGEKG 994

Query: 187  ----MGYPGRIGLDGRDGLPGEPGLDGIPGRNG----MDGIPGKDGLPGKDGIPGTNGTN 238
                MG  G +G  G  G+PG PGL GIPG  G    + G+ G  G PG  G+PG  G  
Sbjct: 995  DEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGAPGIPGLPGFPGVA 1054

Query: 239  GEKGMTGPRGNRGKSGINGVPG 260
            G  G+TG  G  G  G  G PG
Sbjct: 1055 GPPGITGFPGFIGSRGDKGAPG 1076



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 63/129 (48%), Gaps = 16/129 (12%)

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG----YPGRIGLDGRDGLPGEPGLDGI--- 210
           G++G KG  G+PG  G PG  G +G KGD G      G   + G  GLPG  G  GI   
Sbjct: 451 GRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGINGE 510

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGTPAI 264
           PGR G  G PG+ GLP   G PG  G  G  G  GP+G +G S      G  G PG P +
Sbjct: 511 PGRKGDKGDPGQHGLP---GFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPGVPGV 567

Query: 265 CAYKRESCS 273
              K +  S
Sbjct: 568 PGMKGDDGS 576



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 87/187 (46%), Gaps = 36/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G +GE    G +G+ G +G+ G PG+ G      +PG  G RG +G  G PG 
Sbjct: 1154 PGLTGPPGSQGE---PGRIGLPGGKGDDGWPGIAG------LPGFPGLRGIRGLHGLPGT 1204

Query: 172  QGIPGDEGK--------------RGPKGDMG-YPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G PG  G               RG  GD    PG +G+ G+ G  G PG  G PG  G+
Sbjct: 1205 KGFPGSPGADIHGDPGFPGPPGDRGDPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGL 1264

Query: 217  DGIPG------KDGLPGKDGIPGTNGTNGEKGMTGPR------GNRGKSGINGVPGTPAI 264
             G PG        G PG  G PG  G  G +G  GP       G++G +G  G PGTP  
Sbjct: 1265 QGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDAGNPGAPGTPGT 1324

Query: 265  CAYKRES 271
              +  +S
Sbjct: 1325 KGWAGDS 1331



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 76/173 (43%), Gaps = 39/173 (22%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD----EGKRGPKGDMGYPGPQGIPGDEG 179
            G KG  G  G  G  G+PG  GP G +G  GD    EG    +G  G PGP+G  G  G
Sbjct: 450 FGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGING 509

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------------------GRNGMDG 218
           + G KGD G PG+       GLPG PGL G+P                     G  G  G
Sbjct: 510 EPGRKGDKGDPGQ------HGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPG 563

Query: 219 IPGKDGLPGKDGIPGTNG--------TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           +PG  G+ G DG PG NG             G+ GP G+ G  GI G  GTP 
Sbjct: 564 VPGVPGMKGDDGSPGRNGLDGFPGLPGPPGDGIKGPPGDAGYPGIPGTKGTPG 616



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 72/153 (47%), Gaps = 31/153 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G  G  G  G  G KG+ G+ G PG    PG +G+P         G++G PGP
Sbjct: 496 PGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGF---PGLKGVP---------GNVGAPGP 543

Query: 172 QGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGL--------------DGIPGRN 214
           +G  GD      +G +G  G PG  G+ G DG PG  GL               G PG  
Sbjct: 544 KGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRNGLDGFPGLPGPPGDGIKGPPGDA 603

Query: 215 GMDGIPGKDGLPGKDGIPGTN--GTNGEKGMTG 245
           G  GIPG  G PG+ G PG    G  G++G  G
Sbjct: 604 GYPGIPGTKGTPGEMGPPGLGLPGFKGQRGFPG 636



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 64/134 (47%), Gaps = 19/134 (14%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQG 152
            QGF  +T      G +GP G KG+ G  G  G+ G  G  G        PG VGP G +G
Sbjct: 1352 QGFMGNTGPAGAVGDRGPKGPKGDPGFPGAPGIVGAPGIAGIPQKIAIPPGTVGPQGRRG 1411

Query: 153  IPGDEGK------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
             PG  G+            RG  G  G  G  G+    G RG +G +G+ G IG +G  G
Sbjct: 1412 PPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPVGHQGPIGQEGAPG 1471

Query: 201  LPGEPGLDGIPGRN 214
             PG PGL G+PGR+
Sbjct: 1472 RPGSPGLPGMPGRS 1485



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 9/76 (11%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G +G+ G  G  G  GPPG QG PG +G++G KG+ G P         G  GPKGD+G
Sbjct: 56  EKGGRGQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAP---------GITGPKGDVG 106

Query: 189 YPGRIGLDGRDGLPGE 204
             G  G  G DG+PG 
Sbjct: 107 ARGVSGFPGADGIPGH 122



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 91/255 (35%), Gaps = 81/255 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-PQGIPGDEGKRGPKGDMGYPGP 171
           G +G  GQKG  G  G  G  G RG KG  G +GPPG P   P     +G +GD G+PG 
Sbjct: 311 GEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDLGPPGLPAYSPHPSLAKGARGDPGFPGA 370

Query: 172 QGIPGDE--------------------------GKRGPKGDMGYPG-------------- 191
           QG PG +                          G+ GPKG +G PG              
Sbjct: 371 QGEPGSQGEPGDPGPRGPPGLSIGDEDQRRGLPGEMGPKGFIGDPGIPALYPGPPGPDGK 430

Query: 192 ------------------RIGLDGRDGLPGEPGLDGIPGRNG------------------ 215
                               G  G  G PG PGL G PG  G                  
Sbjct: 431 PGPPGPPGLPGPPGPDGFLFGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDE 490

Query: 216 ----MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               + G+PG  G  G +G PG  G  G+ G  G  G  G  G+ G  G P     K +S
Sbjct: 491 AVRGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGAPGPKGAKGDS 550

Query: 272 CSLLPNSETSQLLIP 286
            ++    E  Q  +P
Sbjct: 551 RTITTKGERGQPGVP 565



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 21/121 (17%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           E+G +G PG VGP         +G  GP G  G+PG QG  GD+G+RG  G  G  G +G
Sbjct: 56  EKGGRGQPGPVGP---------QGYNGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVG 106

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG             DGIPG  G  G  G PG +G NG +G +GP+G  G  G
Sbjct: 107 ARGVSGFPG------------ADGIPGHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEG 154

Query: 255 I 255
            
Sbjct: 155 F 155



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 81/207 (39%), Gaps = 65/207 (31%)

Query: 119 GQKGEIGAKGEMG-----------------VKGERGEKGAPGVVGPPGPQGIPGDE---- 157
           G  G  GA+GE G                 +  E   +G PG +GP G  G PG      
Sbjct: 363 GDPGFPGAQGEPGSQGEPGDPGPRGPPGLSIGDEDQRRGLPGEMGPKGFIGDPGIPALYP 422

Query: 158 ----------------------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM-- 187
                                       G++G KG  G+PG  G PG  G +G KGD   
Sbjct: 423 GPPGPDGKPGPPGPPGLPGPPGPDGFLFGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGD 482

Query: 188 --------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                         G PG  G  G +G PG  G  G PG++G+ G PG  G+PG  G PG
Sbjct: 483 CRCAEGDEAVRGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGAPG 542

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+      +G RG+ G+ GVPG
Sbjct: 543 PKGAKGDSRTITTKGERGQPGVPGVPG 569


>gi|74213487|dbj|BAE35556.1| unnamed protein product [Mus musculus]
          Length = 1477

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 450 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 500

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 501 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 560

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 561 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPG 617



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 87/210 (41%), Gaps = 60/210 (28%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-------- 149
            M+G    T    P G QG  G+ G  G  G  G+ G  G  G PG  GP G        
Sbjct: 362 GMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPP 421

Query: 150 ----------------PQGI---------PGDEGKRGPKGDMGYPGPQGI------PGDE 178
                           PQGI         PG +G+ GPKG+   PGP GI      PG+E
Sbjct: 422 GLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGE---PGPHGIQGPIGPPGEE 478

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           GKRGP+GD                  PG  G PG  G  G PG  G PG DG+PG  G  
Sbjct: 479 GKRGPRGD------------------PGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQ 520

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           GE+G  G  G +G  G  G PG P +   +
Sbjct: 521 GERGPVGSSGPKGGQGDPGRPGEPGLPGAR 550



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 88/170 (51%), Gaps = 22/170 (12%)

Query: 128 GEMGVKGERGEKGAPGV---VGP---PGPQGI------PGDEGKRGPKGDMGYPGPQGIP 175
           G  G++G+ G+ G PG     GP   PGP GI      PG+EGKRGP+GD G  GP   P
Sbjct: 437 GPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 493

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 494 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 550

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 551 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 600



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 86/165 (52%), Gaps = 9/165 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 257 GFSGSPGARGFPGAPGLPGLKGHRGHKG---LEGPKGEIGAPGAKGEAGPTGPMGAMGPL 313

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G  G  G PG  G  GIPG +G  G PG  G  G  
Sbjct: 314 GPRGMPGERGRLGPQ---GAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPT 370

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G  G  G++G TGP G  G  G+ G  GT      K  + S 
Sbjct: 371 GARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSA 415



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 245 GEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPT 304

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 305 GPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 364

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G  GP+G RG++G  G  G+
Sbjct: 365 GEAGPTGARGPEGPQGQRGETGPPGPAGS 393



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 967  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1020

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1021 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGE 1080

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1081 PGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1124



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 77/160 (48%), Gaps = 9/160 (5%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  GA G  GP GP G  G  G R
Sbjct: 257 GFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPR 316

Query: 161 GPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G+ G  GPQG PG        GK GP G +G PG  G  G  G+ GE G  G  G  
Sbjct: 317 GMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPE 376

Query: 215 GMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRG 251
           G  G  G+ G P   G  G+PG  GT+G  G  GP G+ G
Sbjct: 377 GPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAG 416



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 89/163 (54%), Gaps = 18/163 (11%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------GIPGDEG 158
           PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +            G  G++G
Sbjct: 735 PPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKG 794

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           + GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG    PG+ G  G
Sbjct: 795 EPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE---PGQKGDAG 851

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG  GL    G PG +G +G  G+ G RG +G  G  G PG+
Sbjct: 852 SPGPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGS 891



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 91/189 (48%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 556 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGV 615

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 616 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGV 675

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PGEPG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+GN G +G  G  G 
Sbjct: 676 PGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGP 735

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 736 PGLQGMPGE 744



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 100/238 (42%), Gaps = 69/238 (28%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP G   P G P
Sbjct: 512 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 571

Query: 155 GDEGKRGPKGD---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----- 200
           G++G+ GP G          MG PGP+G  GD GK G  G+ G PG+ G  G+DG     
Sbjct: 572 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPS 631

Query: 201 -------------------------------------------LPGEPGLDGIPGRNGMD 217
                                                      +PGEPG  G  G  G  
Sbjct: 632 GPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGER 691

Query: 218 GIPGK------DGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPAICA 266
           G PG+       GLPG+ G+ G +G +G KG  GP    G+ G  G+ G+PG   I  
Sbjct: 692 GNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAG 749



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 91/179 (50%), Gaps = 30/179 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 274 PGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGK 333

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGL------------------PGEPGL 207
            G  G+PG  G  GP    G  G+PG  G+ G  G                   PG  G 
Sbjct: 334 RGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGS 393

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G DG PG  G  G  G        G  G+ G +G TGP+G RG+SG  GVPG
Sbjct: 394 QGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPG 452



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 79/179 (44%), Gaps = 36/179 (20%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------EGKRGPKGDM 166
           GP G  GE G  G  G  G+RG  G PG  GP GP GIPG          +G+ GP G  
Sbjct: 314 GPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGAR 373

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG----------------------- 203
           G  GPQG  G+ G  GP G  G PG +G DG  G  G                       
Sbjct: 374 GPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQ 433

Query: 204 -EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  GI G++G  G+PG  G  G  G PG +G    +G  GP G  GK G  G PGT
Sbjct: 434 GSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGI---QGPIGPPGEEGKRGPRGDPGT 489



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 88/190 (46%), Gaps = 39/190 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 579 PPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 638

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PG+ G     GP+G+ G PG  G
Sbjct: 639 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERG 698

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
             G  GLPGE G+ G  G +G  G PG  G  G  G PG  G  GE+G+    GP+G+RG
Sbjct: 699 EPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRG 758

Query: 252 KSGINGVPGT 261
             G  G  GT
Sbjct: 759 GIGEKGAEGT 768



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 679 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGL 738

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 739 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 798

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 799 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 845



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 85/197 (43%), Gaps = 54/197 (27%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKG---------DMGYP 169
           GE GA G +G +GERG   E+G PG+ G PG +G+ G  G  GPKG         D G P
Sbjct: 677 GEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPP 736

Query: 170 GPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDG-------------------------- 200
           G QG+PG+ G     GPKGD G  G  G +G  G                          
Sbjct: 737 GLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEP 796

Query: 201 ----LPGEPGLDGIPGRNGMDGIPGK---------DGLPGKDGIPGTNGTNGEKGMTGPR 247
               L G PG  G PG  G +G  G          DG PG  G PG  G  G+ G  GP+
Sbjct: 797 GPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQ 856

Query: 248 GNRGKSGINGVPGTPAI 264
           G  G  G +G  G P +
Sbjct: 857 GLAGSPGPHGPHGVPGL 873



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 70/148 (47%), Gaps = 27/148 (18%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           ++G  G PG VGP GP+G  G+ G+RG  G  G PG +G+ G  G  GPKG+ G  G IG
Sbjct: 672 DQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIG 731

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG--------------- 239
                   G PGL G+PG  G+ G PG  G  G  G  G  GT G               
Sbjct: 732 DT------GPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPG 785

Query: 240 ------EKGMTGPRGNRGKSGINGVPGT 261
                 EKG  GPRG  G  G  G PG+
Sbjct: 786 PAGPTGEKGEPGPRGLVGPPGSRGNPGS 813



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 54/104 (51%), Gaps = 6/104 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 794 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 853

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           GPQG+    G  GP G  G PG  G  G  G PG  G  G  GR
Sbjct: 854 GPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGSAGR 894



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 82/205 (40%), Gaps = 48/205 (23%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 190 PGSVGPVGPRGPQGLQGQQGGVGPAGPPGEPGEPGPMGPIGSRGPEGPPGKPGEDGEPGR 249

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 250 NGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGA 309

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 310 MGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 369

Query: 244 TGPRGNRGKSGINGVPGTPAICAYK 268
           TG RG  G  G  G  G P     +
Sbjct: 370 TGARGPEGPQGQRGETGPPGPAGSQ 394



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 65/140 (46%), Gaps = 39/140 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G  G  G  G +G +G+RG+         PGP G+PG +G        G PGP
Sbjct: 1024 PGPEGPAGNDGTPGRDGAVGERGDRGD---------PGPAGLPGSQGA------PGTPGP 1068

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PGD G+R                  G PG  G  G PGR       GK GLPG  G 
Sbjct: 1069 VGAPGDAGQR------------------GEPGSRGPVGPPGRA------GKRGLPGPQGP 1104

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G NG++G  G +G+RG
Sbjct: 1105 RGDKGDNGDRGDRGQKGHRG 1124



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  G+ G RGP G  G  G 
Sbjct: 1036 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGEPGSRGPVGPPGRAGK 1095

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1096 RGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1125



 Score = 46.2 bits (108), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 81/198 (40%), Gaps = 63/198 (31%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 804  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 863

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 864  PHGPHGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPAGEPGKEGPPGLRG 923

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 924  DPGSHGRVGDRGPAGPPGSPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 983

Query: 228  KDGIPGTNGTNGEKGMTG 245
              G+PG  GT G+ G TG
Sbjct: 984  MPGLPGPAGTPGKVGPTG 1001



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 87/233 (37%), Gaps = 84/233 (36%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP G  G  G +G +G  G PG  
Sbjct: 827  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHGVPGLKGGRGTQGPPGAT 886

Query: 173  GIPGDEG---------------------KRGP---KGDMGYPGRI--------------- 193
            G PG  G                     K GP   +GD G  GR+               
Sbjct: 887  GFPGSAGRVGPPGPAGAPGPAGPAGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGSPGDK 946

Query: 194  GLDGRD---------------------GLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
            G  G D                     G+PG+ G  G+PG  G  G PGK G        
Sbjct: 947  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 1006

Query: 226  -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                             PG +G  G +GT G  G  G RG+RG  G  G+PG+
Sbjct: 1007 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1059


>gi|384939862|gb|AFI33536.1| collagen alpha-2(IV) chain preproprotein [Macaca mulatta]
          Length = 1712

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 94/169 (55%), Gaps = 15/169 (8%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     +  PPG +G  G  G  G KG+ G+ G  G+   PG+ GPPG  G PG  G+ 
Sbjct: 794 GFKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGASGQ---PGLSGPPGQHGFPGAPGQE 850

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------LPGEPGLDGIPGRN 214
           GP G  G PG +G+PGD   RG  GD+G PG +G+ G  G      L GE G  G PG  
Sbjct: 851 GPLGLPGIPGLEGLPGD---RGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGHPGSPGFK 907

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
           G+DG+PG  GL G+ G PG +G  G    KG  G  G++G++G  G+PG
Sbjct: 908 GIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPG 956



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 85/149 (57%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ G  G  G+ G  G  G++G  G+ G PG +G+PGD   RG  GD+G PGP
Sbjct: 823 PGLPGASGQPGLSGPPGQHGFPGAPGQEGPLGLPGIPGLEGLPGD---RGDPGDIGAPGP 879

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
              +G+ GD G  G  G+ G+PG  G  G DG+PG PGL G  G  GMDG  G  GL G+
Sbjct: 880 VGMKGVSGDRGDAGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGR 939

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG+ G  G  G+ G +G  G+ G  G
Sbjct: 940 PGFPGSKGEAGFFGIPGLKGLAGEPGFKG 968



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 81/151 (53%), Gaps = 6/151 (3%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           + G +G+ GV G+ G KG PG  GPPG +G  G  G  G KG  G PG  G PG     G
Sbjct: 780 QPGPRGDAGVPGQPGFKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGASGQPG---LSG 836

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           P G  G+PG  G +G  GLPG PGL+G+PG     G PG  G PG  G+ G +G  G+ G
Sbjct: 837 PPGQHGFPGAPGQEGPLGLPGIPGLEGLPGDR---GDPGDIGAPGPVGMKGVSGDRGDAG 893

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           + G RG+ G  G  G+ G P     K E  S
Sbjct: 894 LAGERGHPGSPGFKGIDGMPGTPGLKGERGS 924



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 86/158 (54%), Gaps = 14/158 (8%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK----RGPKGDMGYPGPQGIPG 176
            KGE G +G MG+KG  G KG  G+ G PG  GIPG  G+    +G KGD+G PG  G+PG
Sbjct: 990  KGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGAPGIPGLPG 1049

Query: 177  DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-------IPGKDGLPGKD 229
              G  GP G  G+PG IG  G  G PG  GL G  G  G  G       +PG+ GL G+ 
Sbjct: 1050 FPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGPTGDFGDIGDTINLPGRPGLKGEQ 1109

Query: 230  ---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
               GIPG  G  GEKG  G  G  G +G+ GV G P +
Sbjct: 1110 GTAGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGL 1147



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 106/224 (47%), Gaps = 37/224 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G  G  G  G  G  G  G+ G +G PGV G      +PG++G RG +G MG  GP
Sbjct: 1307 PGSKGDAGNPGAPGTPGTKGWAGDSGPQGRPGVFG------LPGEKGPRGEQGFMGNTGP 1360

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-------EPGLDGIPGRNGMDGIPGK-- 222
             G  GD G +GPKGD G+PG  G+ G  G+ G        PG  G  GR G  G PG+  
Sbjct: 1361 AGAVGDRGPKGPKGDPGFPGAPGIVGAPGIAGIPQKIAIPPGTVGPQGRRGPPGAPGEMG 1420

Query: 223  ----------DGLPGKDGIPGTNGTN------GEKGMTGPRGNRGKSGINGVPGTPAICA 266
                       G PGK G  G  G +      G++G  G +G  G+ G  G PG+P +  
Sbjct: 1421 PQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPVGHQGPIGQEGAPGRPGSPGLPG 1480

Query: 267  YKRESCS----LLPNSETSQLLIPPTIVGSEHIFSSSPIVVREG 306
                S S    L+ +S+T Q  + P  VG   ++S   ++  EG
Sbjct: 1481 MPGRSVSIGYLLVKHSQTEQEPMCP--VGMNKLWSGYSLLYFEG 1522



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 81/168 (48%), Gaps = 21/168 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+G  G  G  G KG  G KG  G+ G PG+ G  G QG PG +G+ G  G  G PG 
Sbjct: 1103 PGLKGEQGTAGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGS 1162

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
            QG PG  G  G KGD G+PG  GL G  GL G  GL G+PG  G  G PG D        
Sbjct: 1163 QGEPGRIGLPGGKGDDGWPGIPGLPGFPGLRGIRGLHGLPGTKGFPGSPGADIHGDPGFP 1222

Query: 224  -------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                          LPG  G+PG  G  G  G  GP G+ G  G  G+
Sbjct: 1223 GPPGDRGDPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGLQGFPGI 1270



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 85/175 (48%), Gaps = 20/175 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP+G  G  G +G  G +G+ G+ GAPG VG  G  G  GD G  G +G  G PG 
Sbjct: 847  PGQEGPLGLPGIPGLEGLPGDRGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGHPGSPGF 906

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            +GI G  G  G KG+ G PG  G  G  GL G PG  G  G  G  GIPG  GL G+ G 
Sbjct: 907  KGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGF 966

Query: 232  PGTNG-----------------TNGEKGMTGP---RGNRGKSGINGVPGTPAICA 266
             G+ G                   GEKG  GP   +G  G  GI G+PG P +  
Sbjct: 967  KGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSG 1021



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 97/218 (44%), Gaps = 55/218 (25%)

Query: 96   LVAMQGFCNSTKEYCPPGLQG------PIGQKGEIG----AKGEMGVKGERGEKGAPGVV 145
            +    GF  S  +   PG  G      P G  G+IG      G  G+KGE+G  G PG+ 
Sbjct: 1059 ITGFPGFIGSRGDKGAPGRAGLYGEIGPTGDFGDIGDTINLPGRPGLKGEQGTAGIPGLK 1118

Query: 146  GPPGPQGIPGDEGKRGPKGDMGYP------GPQGIPGDEGK------RGPKGDMGYPGRI 193
            G           G++G +GD+G+P      G QG PG +G+       GP G  G PGRI
Sbjct: 1119 G---------FFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQGEPGRI 1169

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN--------------- 238
            GL G  G  G PG+ G+PG  G+ GI G  GLPG  G PG+ G +               
Sbjct: 1170 GLPGGKGDDGWPGIPGLPGFPGLRGIRGLHGLPGTKGFPGSPGADIHGDPGFPGPPGDRG 1229

Query: 239  ---------GEKGMTGPRGNRGKSGINGVPGTPAICAY 267
                     G  G+ G +G +G  G  G PG+P +  +
Sbjct: 1230 DPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGLQGF 1267



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 85/164 (51%), Gaps = 33/164 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMG----VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           PGL G  G +G  G KG+ G     +G+   +G PG+ GP G  GI G+ G++G KGD G
Sbjct: 462 PGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGINGEPGRKGDKGDPG 521

Query: 168 ------YPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGL---DGIPGRNG 215
                 +PG +G+PG+ G  GPKG  G    I   G  G+ G+PG PG+   DG PGRNG
Sbjct: 522 QHGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRNG 581

Query: 216 M--------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           +               G PG  G P   GIPGT GT GE G  G
Sbjct: 582 LDGFPGLPGPPGDGIKGPPGDAGYP---GIPGTKGTPGEMGPPG 622



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 90/202 (44%), Gaps = 54/202 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERG---------------------EKGAPGV---VGPP 148
            G  GP+G KG  G +G+ G+ GERG                     E+G+PG+    G P
Sbjct: 875  GAPGPVGMKGVSGDRGDAGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMP 934

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------------- 186
            G +G PG  G +G  G  G PG +G+ G+ G +G +GD                      
Sbjct: 935  GLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPIILPGMKDIKGEKG 994

Query: 187  ----MGYPGRIGLDGRDGLPGEPGLDGIPGRNG----MDGIPGKDGLPGKDGIPGTNGTN 238
                MG  G +G  G  G+PG PGL GIPG  G    + G+ G  G PG  G+PG  G  
Sbjct: 995  DEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGAPGIPGLPGFPGVA 1054

Query: 239  GEKGMTGPRGNRGKSGINGVPG 260
            G  G+TG  G  G  G  G PG
Sbjct: 1055 GPPGITGFPGFIGSRGDKGAPG 1076



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 63/129 (48%), Gaps = 16/129 (12%)

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG----YPGRIGLDGRDGLPGEPGLDGI--- 210
           G++G KG  G+PG  G PG  G +G KGD G      G   + G  GLPG  G  GI   
Sbjct: 451 GRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGINGE 510

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGTPAI 264
           PGR G  G PG+ GLP   G PG  G  G  G  GP+G +G S      G  G PG P +
Sbjct: 511 PGRKGDKGDPGQHGLP---GFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPGVPGV 567

Query: 265 CAYKRESCS 273
              K +  S
Sbjct: 568 PGMKGDDGS 576



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 87/187 (46%), Gaps = 36/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G +GE    G +G+ G +G+ G PG+       G+PG  G RG +G  G PG 
Sbjct: 1154 PGLTGPPGSQGE---PGRIGLPGGKGDDGWPGI------PGLPGFPGLRGIRGLHGLPGT 1204

Query: 172  QGIPGDEGK--------------RGPKGDMG-YPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G PG  G               RG  GD    PG +G+ G+ G  G PG  G PG  G+
Sbjct: 1205 KGFPGSPGADIHGDPGFPGPPGDRGDPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGL 1264

Query: 217  DGIPG------KDGLPGKDGIPGTNGTNGEKGMTGPR------GNRGKSGINGVPGTPAI 264
             G PG        G PG  G PG  G  G +G  GP       G++G +G  G PGTP  
Sbjct: 1265 QGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDAGNPGAPGTPGT 1324

Query: 265  CAYKRES 271
              +  +S
Sbjct: 1325 KGWAGDS 1331



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 76/173 (43%), Gaps = 39/173 (22%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD----EGKRGPKGDMGYPGPQGIPGDEG 179
            G KG  G  G  G  G+PG  GP G +G  GD    EG    +G  G PGP+G  G  G
Sbjct: 450 FGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGING 509

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------------------GRNGMDG 218
           + G KGD G PG+       GLPG PGL G+P                     G  G  G
Sbjct: 510 EPGRKGDKGDPGQ------HGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPG 563

Query: 219 IPGKDGLPGKDGIPGTNG--------TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           +PG  G+ G DG PG NG             G+ GP G+ G  GI G  GTP 
Sbjct: 564 VPGVPGMKGDDGSPGRNGLDGFPGLPGPPGDGIKGPPGDAGYPGIPGTKGTPG 616



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 72/153 (47%), Gaps = 31/153 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G  G  G  G  G KG+ G+ G PG    PG +G+P         G++G PGP
Sbjct: 496 PGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGF---PGLKGVP---------GNVGAPGP 543

Query: 172 QGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGL--------------DGIPGRN 214
           +G  GD      +G +G  G PG  G+ G DG PG  GL               G PG  
Sbjct: 544 KGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRNGLDGFPGLPGPPGDGIKGPPGDA 603

Query: 215 GMDGIPGKDGLPGKDGIPGTN--GTNGEKGMTG 245
           G  GIPG  G PG+ G PG    G  G++G  G
Sbjct: 604 GYPGIPGTKGTPGEMGPPGLGLPGFKGQRGFPG 636



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 64/134 (47%), Gaps = 19/134 (14%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQG 152
            QGF  +T      G +GP G KG+ G  G  G+ G  G  G        PG VGP G +G
Sbjct: 1352 QGFMGNTGPAGAVGDRGPKGPKGDPGFPGAPGIVGAPGIAGIPQKIAIPPGTVGPQGRRG 1411

Query: 153  IPGDEGK------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
             PG  G+            RG  G  G  G  G+    G RG +G +G+ G IG +G  G
Sbjct: 1412 PPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPVGHQGPIGQEGAPG 1471

Query: 201  LPGEPGLDGIPGRN 214
             PG PGL G+PGR+
Sbjct: 1472 RPGSPGLPGMPGRS 1485



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 9/76 (11%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G +G+ G  G  G  GPPG QG PG +G++G KG+ G P         G  GPKGD+G
Sbjct: 56  EKGGRGQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAP---------GITGPKGDVG 106

Query: 189 YPGRIGLDGRDGLPGE 204
             G  G  G DG+PG 
Sbjct: 107 ARGVSGFPGADGIPGH 122



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 91/255 (35%), Gaps = 81/255 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-PQGIPGDEGKRGPKGDMGYPGP 171
           G +G  GQKG  G  G  G  G RG KG  G +GPPG P   P     +G +GD G+PG 
Sbjct: 311 GEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDLGPPGLPAYSPHPSLAKGARGDPGFPGA 370

Query: 172 QGIPGDE--------------------------GKRGPKGDMGYPG-------------- 191
           QG PG +                          G+ GPKG +G PG              
Sbjct: 371 QGEPGSQGEPGDPGPRGPPGLSIGDEDQRRGLPGEMGPKGFIGDPGIPALYPGPPGPDGK 430

Query: 192 ------------------RIGLDGRDGLPGEPGLDGIPGRNG------------------ 215
                               G  G  G PG PGL G PG  G                  
Sbjct: 431 PGPPGPPGLPGPPGPDGFLFGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDE 490

Query: 216 ----MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               + G+PG  G  G +G PG  G  G+ G  G  G  G  G+ G  G P     K +S
Sbjct: 491 AVRGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGAPGPKGAKGDS 550

Query: 272 CSLLPNSETSQLLIP 286
            ++    E  Q  +P
Sbjct: 551 RTITTKGERGQPGVP 565



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 21/121 (17%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           E+G +G PG VGP         +G  GP G  G+PG QG  GD+G+RG  G  G  G +G
Sbjct: 56  EKGGRGQPGPVGP---------QGYNGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVG 106

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG             DGIPG  G  G  G PG +G NG +G +GP+G  G  G
Sbjct: 107 ARGVSGFPG------------ADGIPGHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEG 154

Query: 255 I 255
            
Sbjct: 155 F 155



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 81/207 (39%), Gaps = 65/207 (31%)

Query: 119 GQKGEIGAKGEMG-----------------VKGERGEKGAPGVVGPPGPQGIPGDE---- 157
           G  G  GA+GE G                 +  E   +G PG +GP G  G PG      
Sbjct: 363 GDPGFPGAQGEPGSQGEPGDPGPRGPPGLSIGDEDQRRGLPGEMGPKGFIGDPGIPALYP 422

Query: 158 ----------------------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM-- 187
                                       G++G KG  G+PG  G PG  G +G KGD   
Sbjct: 423 GPPGPDGKPGPPGPPGLPGPPGPDGFLFGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGD 482

Query: 188 --------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                         G PG  G  G +G PG  G  G PG++G+ G PG  G+PG  G PG
Sbjct: 483 CRCAEGDEAVRGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGAPG 542

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+      +G RG+ G+ GVPG
Sbjct: 543 PKGAKGDSRTITTKGERGQPGVPGVPG 569


>gi|363736840|ref|XP_001231651.2| PREDICTED: collagen alpha-1(XI) chain isoform 2 [Gallus gallus]
          Length = 1768

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 79/148 (53%), Gaps = 15/148 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G         D G +G +G++G PGP+G  G E
Sbjct: 725 GVKGADGVRGLKGSKGEKGEDGFPGFKG---------DMGLKGDRGEVGQPGPRGEDGPE 775

Query: 179 G---KRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G   + GP GD G  G  G  G+    GLPG PG  G  G  G  G PG +G  G  G+ 
Sbjct: 776 GPKGRAGPSGDPGAAGPAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLH 835

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G++G TGPRG+RG  G  G PG
Sbjct: 836 GKPGPRGQRGPTGPRGSRGPRGPTGKPG 863



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 6/100 (6%)

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           + G PGPQG  G +G  GP G  G  GR G DG  G+PGEPG  G  G +G+ G+PG  G
Sbjct: 516 ESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKG 575

Query: 225 LPG------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G        G+PG +G+ GE G  GPRG  G++G  G+
Sbjct: 576 NRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGL 615



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 60/125 (48%), Gaps = 24/125 (19%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----- 176
            G  G +GE G KGE G +GAPG  GP GPQG     GK GP+G  G PGP G  G     
Sbjct: 1331 GAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGP---AGKPGPEGLRGIPGPVGEQGLPGAP 1387

Query: 177  ----------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                             +G  G KG+ G+PG IGL G  G  GE G  G+PG  G  G  
Sbjct: 1388 GQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGAK 1447

Query: 221  GKDGL 225
            G  G+
Sbjct: 1448 GDAGI 1452



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 101/287 (35%), Gaps = 108/287 (37%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEG 158
           E   PG QGP G +G  G  G+ G +G  G  GA G+ G PG +G         +PGD+G
Sbjct: 516 ESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKG 575

Query: 159 KRG---------------PKGDMGYPGPQGIPGDEGKR---------------------- 181
            RG                +G+ G  GP+G+PG+ G R                      
Sbjct: 576 NRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGLLGPRGTPGPPGQPGIAGIDG 635

Query: 182 --GPKGDM------------------------------------GYPGRIGLDGRDGLPG 203
             GPKG+M                                    G PG  GL G DG PG
Sbjct: 636 PSGPKGNMGPQGEPGPPGQQGIPGPQGLPGPQGPIGPPGEKGPQGKPGLPGLPGSDGPPG 695

Query: 204 EPGLD------------------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            PG +                        G+ G +G+ G+ G  G  G+DG PG  G  G
Sbjct: 696 HPGKEGQSGEKGALGPPGPQGPVGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMG 755

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
            KG  G  G  G  G +G  G         +  +  P  E  +L +P
Sbjct: 756 LKGDRGEVGQPGPRGEDGPEGPKGRAGPSGDPGAAGPAGEKGKLGVP 802



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 64/134 (47%), Gaps = 36/134 (26%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------- 152
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G                 
Sbjct: 734 GLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQPGPRGEDGPEGPKGRAGPSGDPGAAGPA 793

Query: 153 ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIGLD 196
                     +PG  G++GPKG  G+PG  G  G++G RG      P+G  G  G  G  
Sbjct: 794 GEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLHGKPGPRGQRGPTGPRGSR 853

Query: 197 GRDGLPGEPGLDGI 210
           G  G  G+PG  G 
Sbjct: 854 GPRGPTGKPGPKGT 867



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 58/125 (46%), Gaps = 24/125 (19%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---- 210
            G EG++G KG  G PG +G PG  G  GP+G  G PG  GL G  G  GE GL G     
Sbjct: 1331 GAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAPGQD 1390

Query: 211  -----------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                             PG  G  G PG  GL    G PG  G  G++G+ GP+G+ G  
Sbjct: 1391 GPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGL---IGPPGEQGEKGDRGLPGPQGSPGAK 1447

Query: 254  GINGV 258
            G  G+
Sbjct: 1448 GDAGI 1452



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 61/145 (42%), Gaps = 45/145 (31%)

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------- 179
            G  G  G PGPQGIPG   K GP G  G+PG +G+PG +G                    
Sbjct: 965  GKEGAKGDPGPQGIPG---KDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPVGSP 1021

Query: 180  -KRGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
             +RG  G                     + G PG  G  G  G  G  G  G+PG  G  
Sbjct: 1022 GERGAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPS 1081

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG+DG  G+ G PG  G+ G+KG
Sbjct: 1082 GSPGEDGDKGEIGEPGQKGSKGDKG 1106



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 66/152 (43%), Gaps = 36/152 (23%)

Query: 148 PGPQGI------PGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPK----------- 184
           PGPQG+       G  G++GP+G  G P      GP G PG EG+ G K           
Sbjct: 658 PGPQGLPGPQGPIGPPGEKGPQGKPGLPGLPGSDGPPGHPGKEGQSGEKGALGPPGPQGP 717

Query: 185 -------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                        G  G  G  G  G DG PG  G  G+ G  G  G PG  G  G +G 
Sbjct: 718 VGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQPGPRGEDGPEGP 777

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G +G+ G  GP G +GK G+ G+PG P 
Sbjct: 778 KGRAGPSGDPGAAGPAGEKGKLGVPGLPGYPG 809



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
           PGL G  G++G  G+ G  G  G  GEKGA G+ G PGP+G     G  G RGP+G  G 
Sbjct: 802 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLHGKPGPRGQRGPTGPRGSRGPRGPTGK 861

Query: 169 PGPQGI 174
           PGP+G 
Sbjct: 862 PGPKGT 867



 Score = 42.7 bits (99), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 56/150 (37%), Gaps = 57/150 (38%)

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG-------------------- 197
            GK G KGD   PGPQGIP   GK GP G  G+PG  GL G                    
Sbjct: 965  GKEGAKGD---PGPQGIP---GKDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPV 1018

Query: 198  -------------------------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                                             G PGE G  G  GR+G+ G  G  G  
Sbjct: 1019 GSPGERGAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPA 1078

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G PG +G  GE G  G +G++G  G N
Sbjct: 1079 GPSGSPGEDGDKGEIGEPGQKGSKGDKGEN 1108



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 85/194 (43%), Gaps = 36/194 (18%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------- 147
              ++GF     E   PG QGP G KG  G +G  G  G  GE+GA G  GP         
Sbjct: 985  AGLRGFPG---ERGLPGAQGPAGLKGGEGPQGPPGPVGSPGERGAAGTAGPIGLPGRPGP 1041

Query: 148  ------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                   G +G PG++G +GP G  G  GP G+P      GP G  G PG  G  G  G 
Sbjct: 1042 QGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP------GPAGPSGSPGEDGDKGEIGE 1095

Query: 202  PGEPGLDGIPGRN------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PG+ G  G  G N            G  GI G DG PG  G  G  G  G++G  G  G 
Sbjct: 1096 PGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGPRGFPGP 1155

Query: 250  RGKSGINGVPGTPA 263
             G  G+ G+PG P 
Sbjct: 1156 PGPIGLQGLPGPPG 1169



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 77/184 (41%), Gaps = 51/184 (27%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------------ 163
            G+ GAKG+ G +G  G+ G  G+ G PG +G+PG +G  G K                  
Sbjct: 965  GKEGAKGDPGPQGIPGKDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPVGSPGER 1024

Query: 164  GDMGYPGP------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  G  GP                  +G PG++G +GP G  G  G +GL G  G  G P
Sbjct: 1025 GAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPSGSP 1084

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKD------------GIPGTNGTNGEKGMTGPRGNRGKS 253
            G DG  G  G  G  G  G  G++            G PG  G +GE    GPRG +G  
Sbjct: 1085 GEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGE---PGPRGQQGMF 1141

Query: 254  GING 257
            G  G
Sbjct: 1142 GQKG 1145


>gi|37543675|gb|AAM21933.1| type IV collagen [Bombyx mori]
          Length = 887

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 100/211 (47%), Gaps = 38/211 (18%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKG--APGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PPGL GP G  G  G  GE G +GE+G  G  APG  G  GP GIPG  G++G KGD G 
Sbjct: 474 PPGLVGPTGLPGTPGITGEKGDRGEKGATGFGAPGQKGDQGPSGIPGLPGEKGDKGDRGL 533

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGR--------------------------- 198
               G+PG  G  GP   KGD GYPGR GL G                            
Sbjct: 534 ---DGLPGRTGPIGPPGQKGDRGYPGRPGLQGEQGMKGNKGQAAELVYGAKGEPGPRGLP 590

Query: 199 --DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             DGLPG  G+ G PG NG  G  G  G  G  G PG  G  G +GM G RG  G +G +
Sbjct: 591 GNDGLPGVNGVPGRPGNNGPPGEKGDRGFTGARGFPGPRGLPGIQGMEGERGEIGMTGQS 650

Query: 257 GVPGTP-AICAYKRESCSLLPNSETSQLLIP 286
           G+PG P A C  +     +L    + + ++P
Sbjct: 651 GLPGAPGAPCVSQDFLTGILLVRHSQREVVP 681



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 99/195 (50%), Gaps = 45/195 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-------GPPGPQGIPGDEGKRGPKGD 165
           GL+G  GQ G  G  G +G +G +G+ G PGV        G  GP GIPG+ G+   KGD
Sbjct: 305 GLKGDRGQPGAEGPIGPIGYRGHKGDTGLPGVSIDIKGDKGEVGPSGIPGEPGQ---KGD 361

Query: 166 MGYPGPQGIPGDEGKRGP---KGDMGYPGRIG-----------------LDGRDGLPG-- 203
            G PG QG+ G++G RG    KGD G+ GR+G                 + G  GLPG  
Sbjct: 362 RGLPGLQGLQGEKGDRGSLGEKGDQGFTGRMGEKGDTGPIGPTGLPGLTIKGEKGLPGTH 421

Query: 204 ----EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI---- 255
                PGL G PG+ G  G+PG   LPG+ G PG  G  GEKG  G +GN G +G     
Sbjct: 422 GKHGRPGLPGAPGQKGDQGLPG---LPGQLGRPGIPGLPGEKGQKGDQGNEGLAGPPGLV 478

Query: 256 --NGVPGTPAICAYK 268
              G+PGTP I   K
Sbjct: 479 GPTGLPGTPGITGEK 493



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/194 (43%), Positives = 101/194 (52%), Gaps = 43/194 (22%)

Query: 113 GLQGPIGQKGEIG------------AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G+QGP GQKG  G            A G  G KG++GE G PG+ G PG  G PG  G +
Sbjct: 75  GIQGPDGQKGFPGSRGRPGPPGHPGALGSQGEKGDKGELGYPGLPGSPGQSGRPGPVGPQ 134

Query: 161 GPKGDMGYPGPQGIP---------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---D 208
           GPKGD G+ GP G+P         GD G  GPKGD G  G     G  G PG PGL   D
Sbjct: 135 GPKGDQGFEGPPGLPGLPGLLGQTGDRGYTGPKGDKGDAGLAAEKGSKGEPGPPGLLGID 194

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------TGP---RGNRGKS------ 253
           G+PGR+G  G  G+ G+PG+ GIPG  G  GE GM      +GP   +GNRG        
Sbjct: 195 GLPGRDGEKGDTGEPGIPGQ-GIPGYPGQKGEMGMRGFDGLSGPIGEKGNRGPQGYHGSK 253

Query: 254 ---GINGVPGTPAI 264
              GI+G PG P +
Sbjct: 254 GNLGISGEPGRPGV 267



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 87/160 (54%), Gaps = 12/160 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGLQG  G+KG+ G+ GE G +G  G  G  G  GP GP G+PG    +G KG  G  G 
Sbjct: 365 PGLQGLQGEKGDRGSLGEKGDQGFTGRMGEKGDTGPIGPTGLPGLT-IKGEKGLPGTHGK 423

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G PG  G  G KGD G PG  G  GR G+PG PG  G  G  G +G+ G  GL G  G+
Sbjct: 424 HGRPGLPGAPGQKGDQGLPGLPGQLGRPGIPGLPGEKGQKGDQGNEGLAGPPGLVGPTGL 483

Query: 232 PGTNGTNGEK-----------GMTGPRGNRGKSGINGVPG 260
           PGT G  GEK           G  G +G++G SGI G+PG
Sbjct: 484 PGTPGITGEKGDRGEKGATGFGAPGQKGDQGPSGIPGLPG 523



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 25/167 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           GL    G KGE G  G +G+ G      E+G+ G PG+ G    QGIPG  G++G  G  
Sbjct: 174 GLAAEKGSKGEPGPPGLLGIDGLPGRDGEKGDTGEPGIPG----QGIPGYPGQKGEMGMR 229

Query: 167 GYPGPQGIPGDEGKRGP------KGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G+ G  G  G++G RGP      KG++G    PGR G+ G DG PG+PG  G+PG  G  
Sbjct: 230 GFDGLSGPIGEKGNRGPQGYHGSKGNLGISGEPGRPGVPGIDGAPGQPGDVGLPGITGEK 289

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGP------RGNRGKSGINGV 258
           G  G+ G PG+DG+ G  G  G+ G  GP      RG++G +G+ GV
Sbjct: 290 GDKGELGFPGRDGLGGLKGDRGQPGAEGPIGPIGYRGHKGDTGLPGV 336



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 85/158 (53%), Gaps = 13/158 (8%)

Query: 113 GLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPK 163
           GL GPIG+KG  G      +KG +G+ GE G  G PG+ G PG  G   +PG  G++G K
Sbjct: 233 GLSGPIGEKGNRGPQGYHGSKGNLGISGEPGRPGVPGIDGAPGQPGDVGLPGITGEKGDK 292

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG----LDGIPGRNGMDGI 219
           G++G+PG  G+ G +G RG  G  G  G IG  G  G  G PG    + G  G  G  GI
Sbjct: 293 GELGFPGRDGLGGLKGDRGQPGAEGPIGPIGYRGHKGDTGLPGVSIDIKGDKGEVGPSGI 352

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PG+ G  G  G+PG  G  GEKG  G  G +G  G  G
Sbjct: 353 PGEPGQKGDRGLPGLQGLQGEKGDRGSLGEKGDQGFTG 390



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 91/191 (47%), Gaps = 40/191 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL G  G+ G  G  G  G KG++G  G PG +G PG  G+PG++G++G +G+ G  GP 
Sbjct: 416 GLPGTHGKHGRPGLPGAPGQKGDQGLPGLPGQLGRPGIPGLPGEKGQKGDQGNEGLAGPP 475

Query: 172 -----QGIPGDEGKRGPKGDMGYPGRIGLD--GRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                 G+PG  G  G KGD G  G  G    G+ G  G  G+ G+PG  G  G  G DG
Sbjct: 476 GLVGPTGLPGTPGITGEKGDRGEKGATGFGAPGQKGDQGPSGIPGLPGEKGDKGDRGLDG 535

Query: 225 LPGKD------------GIPGTNGTNGEKGMT-----------------GPR---GNRGK 252
           LPG+             G PG  G  GE+GM                  GPR   GN G 
Sbjct: 536 LPGRTGPIGPPGQKGDRGYPGRPGLQGEQGMKGNKGQAAELVYGAKGEPGPRGLPGNDGL 595

Query: 253 SGINGVPGTPA 263
            G+NGVPG P 
Sbjct: 596 PGVNGVPGRPG 606



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP--GVVGPPGPQGIPG 155
            + G    T    PPG +G  G  G  G +GE G+KG +G+      G  G PGP+G+PG
Sbjct: 532 GLDGLPGRTGPIGPPGQKGDRGYPGRPGLQGEQGMKGNKGQAAELVYGAKGEPGPRGLPG 591

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           ++G  G  G  G PG  G PG++G RG  G  G+PG  GL G  G+ GE G  G+ G++G
Sbjct: 592 NDGLPGVNGVPGRPGNNGPPGEKGDRGFTGARGFPGPRGLPGIQGMEGERGEIGMTGQSG 651

Query: 216 MDGIPG 221
           + G PG
Sbjct: 652 LPGAPG 657



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 88/191 (46%), Gaps = 39/191 (20%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           QG  G+KG+ G  G  G+ G+ G+KG  G VGP G  GIPG  GK G +G  G+PG  G 
Sbjct: 2   QGLHGEKGDQGLVGRPGLPGQPGQKGDAGPVGPAGVPGIPGLPGKVGAQGRQGFPGEPGR 61

Query: 175 P---------GDEGKRGPKGDMGYPGR------------IGLDGRDGLPGEPGLDGIPGR 213
           P         GD G +GP G  G+PG             +G  G  G  GE G  G+PG 
Sbjct: 62  PGVIGLPGQKGDMGIQGPDGQKGFPGSRGRPGPPGHPGALGSQGEKGDKGELGYPGLPGS 121

Query: 214 NGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGI------ 255
            G  G PG  G  G  G  G              G  G++G TGP+G++G +G+      
Sbjct: 122 PGQSGRPGPVGPQGPKGDQGFEGPPGLPGLPGLLGQTGDRGYTGPKGDKGDAGLAAEKGS 181

Query: 256 NGVPGTPAICA 266
            G PG P +  
Sbjct: 182 KGEPGPPGLLG 192


>gi|224046761|ref|XP_002188607.1| PREDICTED: uncharacterized protein LOC100224581 [Taeniopygia
           guttata]
          Length = 1598

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 81/158 (51%), Gaps = 27/158 (17%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPKGDM 166
           CPPG      QKGE G  G  G KG++GE+G PG+ G  G +G  G     G++G KG +
Sbjct: 477 CPPG------QKGERGPLGFEGPKGQKGERGIPGLPGLRGEKGESGKAYGIGEKGEKGSL 530

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PGP                  PGR G  G  G PG+PG  G+PG  G  G  G+ G P
Sbjct: 531 GSPGP------------------PGREGAKGEAGEPGQPGAFGLPGPAGPKGSEGRPGPP 572

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G  G  G  GE+G  G RG++G  G++G PG P +
Sbjct: 573 GIKGYVGAPGLQGERGEKGTRGDKGDRGLDGFPGKPGV 610



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 90/166 (54%), Gaps = 18/166 (10%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGE---------KGAPGVVGPPGPQGIPGDEG 158
           E  P G +GP GQKGE G  G  G++GE+GE         KG  G +G PGP   PG EG
Sbjct: 484 ERGPLGFEGPKGQKGERGIPGLPGLRGEKGESGKAYGIGEKGEKGSLGSPGP---PGREG 540

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            +G  G+ G PG  G+PG  G   PKG  G PG  G+ G  G PG  G  G  G  G  G
Sbjct: 541 AKGEAGEPGQPGAFGLPGPAG---PKGSEGRPGPPGIKGYVGAPGLQGERGEKGTRGDKG 597

Query: 219 IPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGNRGKSGINGVPGT 261
             G DG PGK G+ G     G+ G  G +G +G++G+ G+ G+PGT
Sbjct: 598 DRGLDGFPGKPGVEGKQGPPGSPGLPGASGTKGDKGEPGLPGLPGT 643



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 73/158 (46%), Gaps = 34/158 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGDM 166
           GL G  GQKGE G KGE G  G+ G KG PG  G PG QG      + G  G RG KGD 
Sbjct: 754 GLPGLPGQKGERGEKGEDGFPGKAGPKGEPGSRGQPGEQGEAGFPGLRGLPGPRGEKGDR 813

Query: 167 GYPGPQGIPGDEGKRGPKGDM----------------------------GYPGRIGLDGR 198
           G  G  G+P  +G+RG KGD                             G  G  G+ G 
Sbjct: 814 GEKGRDGLPAMKGERGEKGDTGSPGPPGLPGTTAFFTPHPRIPGEPGPKGDKGDRGMSGE 873

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
            GLPG PG  G+PG  G+ G  G+ G  G+ G PG  G
Sbjct: 874 RGLPGVPGEQGVPGPPGVQGAKGEKGARGEAGAPGETG 911



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 79/153 (51%), Gaps = 12/153 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEK------------GAPGVVGPPGPQGIPGDEGK 159
            PG  G  G  G  GA+G  G KG+RG+             G  G  GPPG  G PG  G 
Sbjct: 1229 PGKPGEQGLPGREGARGLPGFKGQRGDTGPPGPRGEPGVTGPAGREGPPGKDGDPGPIGP 1288

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +GP+G  G PG  G+PG  G+ GP G  G  G  G  G  GLPG  G  G PG  G  G 
Sbjct: 1289 QGPRGLRGQPGKNGVPGSAGEPGPAGIPGPKGNKGEAGSPGLPGFIGPRGPPGEPGEKGP 1348

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            PGK+G PGK G  G+ G  GE G+ G +G +G+
Sbjct: 1349 PGKEGTPGKQGAIGSKGERGEPGIKGEKGLQGE 1381



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 70/150 (46%), Gaps = 34/150 (22%)

Query: 152 GIPGDEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G+PG +G+RG KG+ G+PG   P+G PG  G+ G +G+ G+PG        GLPG  G  
Sbjct: 757 GLPGQKGERGEKGEDGFPGKAGPKGEPGSRGQPGEQGEAGFPGL------RGLPGPRGEK 810

Query: 209 GIPGRNGMDGIPGKDGLPGKD-------------------------GIPGTNGTNGEKGM 243
           G  G  G DG+P   G  G+                          G PG  G  G++GM
Sbjct: 811 GDRGEKGRDGLPAMKGERGEKGDTGSPGPPGLPGTTAFFTPHPRIPGEPGPKGDKGDRGM 870

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           +G RG  G  G  GVPG P +   K E  +
Sbjct: 871 SGERGLPGVPGEQGVPGPPGVQGAKGEKGA 900



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 80/170 (47%), Gaps = 33/170 (19%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------P 162
             G  G+ G  G +G  G+ GE+G PG  G    +G+PG +G+RG               P
Sbjct: 1214 AGNDGKDGKPGSLGEPGKPGEQGLPGREGA---RGLPGFKGQRGDTGPPGPRGEPGVTGP 1270

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGI 219
             G  G PG  G PG  G +GP+G  G PG+ G+ G  G PG    PG  G  G  G  G+
Sbjct: 1271 AGREGPPGKDGDPGPIGPQGPRGLRGQPGKNGVPGSAGEPGPAGIPGPKGNKGEAGSPGL 1330

Query: 220  PG------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG            + G PGK+G PG  G  G KG  G  G +G+ G+ G
Sbjct: 1331 PGFIGPRGPPGEPGEKGPPGKEGTPGKQGAIGSKGERGEPGIKGEKGLQG 1380



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 86/174 (49%), Gaps = 42/174 (24%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPG---------------VVGPPGPQGIPGDEGK---RGP 162
            KG+ G  GE+G KGE+G  G PG                 GP GP G PGD GK    GP
Sbjct: 1142 KGDRGMTGEVGEKGEQGHPGMPGFSGAPGNPGPPGSDGAPGPIGPAGNPGDVGKDGPPGP 1201

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------- 215
            +G  G PG  GI G++GK G  G +G PG+    G  GLPG  G  G+PG  G       
Sbjct: 1202 QGPPGLPGLPGIAGNDGKDGKPGSLGEPGK---PGEQGLPGREGARGLPGFKGQRGDTGP 1258

Query: 216  --------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                    + G  G++G PGKDG PG  G  G      PRG RG+ G NGVPG+
Sbjct: 1259 PGPRGEPGVTGPAGREGPPGKDGDPGPIGPQG------PRGLRGQPGKNGVPGS 1306



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 63/117 (53%), Gaps = 18/117 (15%)

Query: 111  PPGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            P G +GP G+ G+   IG +G  G++G+ G+ G PG  G PGP GIPG      PKG+ G
Sbjct: 1270 PAGREGPPGKDGDPGPIGPQGPRGLRGQPGKNGVPGSAGEPGPAGIPG------PKGNKG 1323

Query: 168  YPGPQGIPG---------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
              G  G+PG         + G++GP G  G PG+ G  G  G  GEPG+ G  G  G
Sbjct: 1324 EAGSPGLPGFIGPRGPPGEPGEKGPPGKEGTPGKQGAIGSKGERGEPGIKGEKGLQG 1380



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 56/111 (50%), Gaps = 22/111 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKG-------------------APGVVGPPGP 150
           GL GP G+KG+ G KG  G+   KGERGEKG                    P + G PGP
Sbjct: 802 GLPGPRGEKGDRGEKGRDGLPAMKGERGEKGDTGSPGPPGLPGTTAFFTPHPRIPGEPGP 861

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
           +G  GD G  G +G  G PG QG+PG  G +G KG+ G  G  G  G  GL
Sbjct: 862 KGDKGDRGMSGERGLPGVPGEQGVPGPPGVQGAKGEKGARGEAGAPGETGL 912



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 99/253 (39%), Gaps = 97/253 (38%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---------------------------KGERGEKGAPGV 144
           PGLQG  G+KG  G KG+ G+                           KG++GE G PG+
Sbjct: 581 PGLQGERGEKGTRGDKGDRGLDGFPGKPGVEGKQGPPGSPGLPGASGTKGDKGEPGLPGL 640

Query: 145 VGPPG----PQGIPGDEGKRGPKGDMGYPGPQ------------GIPGDEGKRGPKGDMG 188
              PG     +G+ G+EGK GP+G  G PG              G+PG  G+RG KG+ G
Sbjct: 641 ---PGTLVHTEGLKGEEGKPGPRGPQGQPGLPGPPGEPGLEGKPGVPGLPGQRGKKGEPG 697

Query: 189 YPG---------------------------------------------RIGLDGRDGLPG 203
           +PG                                               G DG  GLPG
Sbjct: 698 FPGINGLIGPQGPPGPPGIAGPPGPPGPPGLPGEIGVSGKTGPPGPAGLPGKDGLSGLPG 757

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE------KGMTGPRGNRGKSGING 257
            PG  G  G  G DG PGK G  G+ G  G  G  GE      +G+ GPRG +G  G  G
Sbjct: 758 LPGQKGERGEKGEDGFPGKAGPKGEPGSRGQPGEQGEAGFPGLRGLPGPRGEKGDRGEKG 817

Query: 258 VPGTPAICAYKRE 270
             G PA+   + E
Sbjct: 818 RDGLPAMKGERGE 830



 Score = 40.0 bits (92), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 15/85 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------VGPPGPQGIPGD 156
            PG  G  G  GE G  G  G KG +GE G+PG+                GPPG +G PG 
Sbjct: 1298 PGKNGVPGSAGEPGPAGIPGPKGNKGEAGSPGLPGFIGPRGPPGEPGEKGPPGKEGTPGK 1357

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKR 181
            +G  G KG+ G PG +G  G +G++
Sbjct: 1358 QGAIGSKGERGEPGIKGEKGLQGEK 1382


>gi|442619460|ref|NP_001262640.1| CG42342, isoform R [Drosophila melanogaster]
 gi|440217504|gb|AGB96020.1| CG42342, isoform R [Drosophila melanogaster]
          Length = 596

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 87/193 (45%), Gaps = 45/193 (23%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE--- 178
           GE G  GE+G +G +GE G PGV GPPG  G PG +G +G +GD G      I GDE   
Sbjct: 345 GERGPPGEIGAQGPQGEAGQPGVAGPPGVAGAPGTKGDKGDRGDRGLT--TTIKGDEFPT 402

Query: 179 ----------------------------------GKRGPKGDMGYPGRIGLDGRDGLPGE 204
                                             G++GP+G  G  G  GLDG  G  GE
Sbjct: 403 GIIEGPPGPAGPPGPPGEPGARGEPGPIGPAGPPGEKGPRGKRGKRGPPGLDGMKGAQGE 462

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGT 261
            G  G     G  G+PG DG+PG++G  G  G+ G+ G  G R   G+RG  G  GVPG 
Sbjct: 463 TGHKG---ERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPGL 519

Query: 262 PAICAYKRESCSL 274
            A C    +   L
Sbjct: 520 DAPCPLGADGLPL 532



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 12/104 (11%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G +G+RG++G PG+ G  G QG   + G +G +GD G PG  GIPG EG RG +G  G
Sbjct: 438 EKGPRGKRGKRGPPGLDGMKGAQG---ETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRG 494

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRN-----GMDGIPGKDGLPG 227
             G  G  GR G  G+ G  G+PG +     G DG+P    LPG
Sbjct: 495 DAGPPGKRGRKGDRGDKGEQGVPGLDAPCPLGADGLP----LPG 534



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 76/229 (33%), Gaps = 92/229 (40%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---------------------------- 168
           GEKG PG+ G  G +G  G  G +G KGD+G+                            
Sbjct: 264 GEKGDPGLNGISGEKGAAGKPGDKGQKGDVGHPGMDVFQTVKDLQEAGVNVSASTVIKLK 323

Query: 169 --------------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                               PG +G PG+ G +GP+G+ G PG  G  G  G PG  G  
Sbjct: 324 GEPGEPGPPGPPGEAGQPGAPGERGPPGEIGAQGPQGEAGQPGVAGPPGVAGAPGTKGDK 383

Query: 209 GIPGRNGM------DGIP--------------------------------------GKDG 224
           G  G  G+      D  P                                      G  G
Sbjct: 384 GDRGDRGLTTTIKGDEFPTGIIEGPPGPAGPPGPPGEPGARGEPGPIGPAGPPGEKGPRG 443

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
             GK G PG +G  G +G TG +G RG  G+ G  G P     + E  S
Sbjct: 444 KRGKRGPPGLDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGS 492


>gi|410969050|ref|XP_003991010.1| PREDICTED: collagen alpha-1(III) chain [Felis catus]
          Length = 1466

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 66/114 (57%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGEMG  G  G  G  G  GPPGP G  G  G+RG  G+ G  G +G PG  G+RG  G 
Sbjct: 395 KGEMGPAGIPGAPGLIGARGPPGPSGTNGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGS 454

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +G+PG  G  GE
Sbjct: 455 PGIPGPKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGANGLPGEKGPAGE 508



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 93/189 (49%), Gaps = 30/189 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G    +     PG +G  G+ G+ GAKGE G +GERGE G+PG+   PGP+G  G
Sbjct: 409 LIGARGPPGPSGTNGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGSPGI---PGPKGEDG 465

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------EPG 206
            +G  G  G  G PG  G  G  G RGP G  G PG  G  G  G PG         EPG
Sbjct: 466 KDGSPGEPGANGLPGAAGERGAPGFRGPAGANGLPGEKGPAGERGGPGPAGPRGAPGEPG 525

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------------------GMTGPRG 248
            DG+PG  G+ G+PG  G PG DG PG  G+ GE                   G  GP+G
Sbjct: 526 RDGVPGGPGIRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKG 585

Query: 249 NRGKSGING 257
           N G  G NG
Sbjct: 586 NDGAPGKNG 594



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 54/100 (54%)

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK G  G  G PG +G+PG  G +GP G  G+PG  G  G DG  GE G  G PG  G +
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G+PG++G PG  G  G  G  G  G+ G  G RG  G  G
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARG 327



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 9/109 (8%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
           G+ GE G PG    PG +G+PG  G +GP G  G+PG +G  G +G+ G KG+ G P   
Sbjct: 228 GKDGESGRPGR---PGERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAP--- 281

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           GL G +GLPGE   +G PG  G  G PG+ G PG  G  G  G +G +G
Sbjct: 282 GLKGENGLPGE---NGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARG 327



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 87/201 (43%), Gaps = 54/201 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------- 161
           PGL+G  G  GE GA G MG +G  GE+G PG+   PG  G  G++G RG          
Sbjct: 281 PGLKGENGLPGENGAPGPMGPRGAPGERGRPGL---PGAAGARGNDGARGSDGQPGPPGP 337

Query: 162 -----------PKGDM---------------GYPGPQGIPGDEGK------------RGP 183
                       KG++               G PGPQG  G  G             +G 
Sbjct: 338 PGTAGFPGSPGAKGEVGPAGSPGSSGSPGQRGEPGPQGHAGAPGPPGPPGTNGSPGGKGE 397

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G  G PG  GL G  G PG  G +G PG+ G  G PGK+G  G+   PG  G  GE G 
Sbjct: 398 MGPAGIPGAPGLIGARGPPGPSGTNGAPGQRGAAGEPGKNGAKGE---PGPRGERGEAGS 454

Query: 244 TGPRGNRGKSGINGVPGTPAI 264
            G  G +G+ G +G PG P  
Sbjct: 455 PGIPGPKGEDGKDGSPGEPGA 475



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 53/102 (51%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G+ G PG +G  G  G  G PGL G  G  G DG  G D
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSD 329



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 184  KGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            KG+ G PG  G +G  G PG    PGL G  G  G DG PG DGLPG+DG PG  G  GE
Sbjct: 977  KGESGKPGSPGHNGERGAPGPQGLPGLAGAAGEPGRDGNPGSDGLPGRDGAPGGKGDRGE 1036



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 90/241 (37%), Gaps = 87/241 (36%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           E   PG+ GP G+ G+ G+ GE G  G     GE+GAPG  GP G  G+PG+   +GP G
Sbjct: 451 EAGSPGIPGPKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGANGLPGE---KGPAG 507

Query: 165 DMGY------------PGPQGIPGDEGKR---------------GPKGD----------- 186
           + G             PG  G+PG  G R               GP G            
Sbjct: 508 ERGGPGPAGPRGAPGEPGRDGVPGGPGIRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPG 567

Query: 187 ----------MGYPGRIGLDGRDGLPGE-------------------------------- 204
                     MG+PG  G DG  G  GE                                
Sbjct: 568 PSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPAGKNGETGPQGPPGPTGPAG 627

Query: 205 -PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G PG  G+ G+PG  G PG++G PG  G  GE G  G  G +G SG  G  G P 
Sbjct: 628 DKGDIGPPGPQGLQGLPGTSGPPGENGKPGEPGPKGEAGSPGTPGGKGDSGAPGERGPPG 687

Query: 264 I 264
            
Sbjct: 688 A 688



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 43/78 (55%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 247 PPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306

Query: 171 PQGIPGDEGKRGPKGDMG 188
            +G PG  G  G +G+ G
Sbjct: 307 ERGRPGLPGAAGARGNDG 324



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  GM G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 61/135 (45%), Gaps = 21/135 (15%)

Query: 132  VKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
            VKGE G+ G+PG     G PGPQG+PG  G  G  G  G PG  G+PG +G  G KGD G
Sbjct: 976  VKGESGKPGSPGHNGERGAPGPQGLPGLAGAAGEPGRDGNPGSDGLPGRDGAPGGKGDRG 1035

Query: 189  ------------------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
                                G  G +G  G  G  G  G PG  G  G PG  G  G  G
Sbjct: 1036 ENGSPGPPGAPGHPGPPGPVGPAGKNGDRGETGPAGPSGAPGPAGSRGAPGPQGPRGDKG 1095

Query: 231  IPGTNGTNGEKGMTG 245
              G  G+NG KG  G
Sbjct: 1096 ETGERGSNGIKGHRG 1110



 Score = 39.7 bits (91), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 6/67 (8%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KG+IG  G  G+      +G PG  GPPG  G PG+ G +G  G  G PG +G  G  G+
Sbjct: 629 KGDIGPPGPQGL------QGLPGTSGPPGENGKPGEPGPKGEAGSPGTPGGKGDSGAPGE 682

Query: 181 RGPKGDM 187
           RGP G +
Sbjct: 683 RGPPGAL 689


>gi|146345400|sp|Q07563.3|COHA1_MOUSE RecName: Full=Collagen alpha-1(XVII) chain; AltName: Full=180 kDa
           bullous pemphigoid antigen 2; AltName: Full=Bullous
           pemphigoid antigen 2; Contains: RecName: Full=120 kDa
           linear IgA disease antigen homolog
          Length = 1470

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 86/200 (43%), Gaps = 59/200 (29%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG- 179
           +G  G KG+MG +G +G++G PG  G PGP G PG EG +G KG +G PG +G  G  G 
Sbjct: 573 RGSPGPKGDMGSQGPKGDRGLPGTPGIPGPLGHPGPEGPKGQKGSIGDPGMEGPIGQRGL 632

Query: 180 -------------KRGPKGDMGYPGR---------------------------------I 193
                          G KGD G  G                                   
Sbjct: 633 AGPMGPRGEPGPPGSGEKGDRGIAGEQGPQGLPGVPGPPGLRGHSGSPGPQGPPGAVGPQ 692

Query: 194 GLDGRDGLP---GEPGLDGIPGRN---------GMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GL G  GLP   G+ GL G PG           G+ G PG  GLPG  G PG  G  G  
Sbjct: 693 GLRGDVGLPGVKGDKGLMGPPGPKGDQGEKGPRGLTGEPGIRGLPGAVGEPGAKGAMGPA 752

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G  G +G+RG+ G+ G+PGT
Sbjct: 753 GADGQQGSRGEQGLTGMPGT 772



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 86/199 (43%), Gaps = 74/199 (37%)

Query: 112 PGLQGPIGQKG--------------EIGAKGEMGVKGE---------------------- 135
           PG++GPIGQ+G                G KG+ G+ GE                      
Sbjct: 621 PGMEGPIGQRGLAGPMGPRGEPGPPGSGEKGDRGIAGEQGPQGLPGVPGPPGLRGHSGSP 680

Query: 136 --------------RGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
                         RG+ G PGV      +GPPGP+   GD+G++GP+G  G PG +G+P
Sbjct: 681 GPQGPPGAVGPQGLRGDVGLPGVKGDKGLMGPPGPK---GDQGEKGPRGLTGEPGIRGLP 737

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------------GMDGIPGKD 223
           G  G+ G KG M   G  G DG+ G  GE GL G+PG              G+ G  G  
Sbjct: 738 GAVGEPGAKGAM---GPAGADGQQGSRGEQGLTGMPGTRGPPGPAGDPGKPGLTGPQGPQ 794

Query: 224 GLPGKDGIPGTNGTNGEKG 242
           GLPG  G PGT G  G  G
Sbjct: 795 GLPGSPGRPGTKGEPGAPG 813


>gi|390457532|ref|XP_003731958.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(IV) chain-like
            [Callithrix jacchus]
          Length = 1669

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 101/202 (50%), Gaps = 34/202 (16%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQ 151
            V   G   +  E   PG+ GP   +G  G  GE G KGE+G+ G PG+      G  G Q
Sbjct: 1013 VGGMGLPGTPGEKGVPGIPGP---QGSPGLPGEKGAKGEKGQAGPPGIGIPGLPGDKGDQ 1069

Query: 152  GI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            GI   PG  G++G KG +G PG   +PG  G +G  G +GYPG  GL G  G  G PGLD
Sbjct: 1070 GIAGFPGSPGEKGEKGSVGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLD 1126

Query: 209  GIPGRNGMDGI---------PGKDGLPGKDGIPGTNGTNGEKGM-----------TGPRG 248
            GIPG  G  G+          G+ G PG DGIPG+ G  GE G+            G +G
Sbjct: 1127 GIPGVKGEAGLLGTPGPTGPAGQKGXPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKG 1186

Query: 249  NRGKSGINGVPGTPAICAYKRE 270
             +G+ G  G+ G+P I   K E
Sbjct: 1187 AKGEVGFPGLAGSPGIPGAKGE 1208



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 82/153 (53%), Gaps = 29/153 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G KG++G  GE+G +G PG  G PG  G  G  G+ GPKGD   PG  G PG  
Sbjct: 948  GQKGDQGEKGQIGPIGEKGSRGDPGSPGVPGKDGQAGQPGQPGPKGD---PGISGTPGSP 1004

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G  GPKG +G     G+    GLPG PG  G+PG      IPG  G PG   +PG  G  
Sbjct: 1005 GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGSPG---LPGEKGAK 1046

Query: 239  GEKGMTGP--------RGNRGKSGINGVPGTPA 263
            GEKG  GP         G++G  GI G PG+P 
Sbjct: 1047 GEKGQAGPPGIGIPGLPGDKGDQGIAGFPGSPG 1079



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 88/171 (51%), Gaps = 26/171 (15%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GPIG+KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 960  GPIGEKGSRGDPGSPGVPGKDGQAGQPGQPGPKGDPGISGTPGSPGLPGPKGSVGGMGLP 1019

Query: 167  ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
                     G PGPQG PG  G++G KG+        +G PG  G  G  G+ G PG  G
Sbjct: 1020 GTPGEKGVPGIPGPQGSPGLPGEKGAKGEKGQAGPPGIGIPGLPGDKGDQGIAGFPGSPG 1079

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  GIPG  G PG  G PG+ G  G  G+ G +G++G  G++G+PG
Sbjct: 1080 EKGEKGSVGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 1130



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 91/187 (48%), Gaps = 33/187 (17%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
              QG    T +   PGL G   Q+G  G  G  G KGE G  G PG  G PGP G PG  
Sbjct: 846  GAQGLPGVTGQSGLPGLPG---QQGTPGLPGFPGSKGEMGVMGTPGQPGSPGPVGSPGIP 902

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP------------------------GRI 193
            G    KGD G+PG  G  GD G +G KGD+G P                        G+I
Sbjct: 903  GV---KGDHGFPGSSGPRGDPGLKGDKGDVGLPGQPGSMDKVDMGTMKGQKGDQGEKGQI 959

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G  G  G  G+PG  G+PG++G  G PG+   PG  G PG +GT G  G+ GP+G+ G  
Sbjct: 960  GPIGEKGSRGDPGSPGVPGKDGQAGQPGQ---PGPKGDPGISGTPGSPGLPGPKGSVGGM 1016

Query: 254  GINGVPG 260
            G+ G PG
Sbjct: 1017 GLPGTPG 1023



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 91/185 (49%), Gaps = 35/185 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVG-P--PGPQGI 153
            PG  G  GQ G+ G KG+ G+ G  G  G                PG  G P  PGPQG 
Sbjct: 977  PGKDGQAGQPGQPGPKGDPGISGTPGSPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGS 1036

Query: 154  PGDEGKRGPKGDMGYPGPQ--GIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEP 205
            PG  G++G KG+ G  GP   GIPG  G +G +G  G+PG  G  G        G+PG P
Sbjct: 1037 PGLPGEKGAKGEKGQAGPPGIGIPGLPGDKGDQGIAGFPGSPGEKGEKGSVGIPGMPGSP 1096

Query: 206  GLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGIN 256
            GL G PG  G  G P      G  GLPG DGIPG  G     G  G TGP G +G  G +
Sbjct: 1097 GLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLLGTPGPTGPAGQKGXPGSD 1156

Query: 257  GVPGT 261
            G+PG+
Sbjct: 1157 GIPGS 1161



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/181 (41%), Positives = 92/181 (50%), Gaps = 24/181 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGY 168
            PG QG  G  G  G+KGEMGV G  G+ G+PG VG PG  G+ GD G     GP+GD G 
Sbjct: 863  PGQQGTPGLPGFPGSKGEMGVMGTPGQPGSPGPVGSPGIPGVKGDHGFPGSSGPRGDPGL 922

Query: 169  PGPQG---IPGDEGK---------RGPKGDMGYPGRIGLDGRDGL------PGEPGLD-- 208
             G +G   +PG  G          +G KGD G  G+IG  G  G       PG PG D  
Sbjct: 923  KGDKGDVGLPGQPGSMDKVDMGTMKGQKGDQGEKGQIGPIGEKGSRGDPGSPGVPGKDGQ 982

Query: 209  -GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             G PG+ G  G PG  G PG  G+PG  G+ G  G+ G  G +G  GI G  G+P +   
Sbjct: 983  AGQPGQPGPKGDPGISGTPGSPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGE 1042

Query: 268  K 268
            K
Sbjct: 1043 K 1043



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 86/176 (48%), Gaps = 25/176 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL  P G KG+ GA+G  GV G+ G  G PG  G PG  G PG +G+ G  G  G PG 
Sbjct: 834  PGLDMP-GPKGDKGAQGLPGVTGQSGLPGLPGQQGTPGLPGFPGSKGEMGVMGTPGQPGS 892

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD------------- 217
             G  G  G  G KGD G+PG  G  G  GL G+ G  G+PG+ G MD             
Sbjct: 893  PGPVGSPGIPGVKGDHGFPGSSGPRGDPGLKGDKGDVGLPGQPGSMDKVDMGTMKGQKGD 952

Query: 218  ----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                      G  G  G PG  G+PG +G  G+ G  GP+G+ G SG  G PG P 
Sbjct: 953  QGEKGQIGPIGEKGSRGDPGSPGVPGKDGQAGQPGQPGPKGDPGISGTPGSPGLPG 1008



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 94/220 (42%), Gaps = 38/220 (17%)

Query: 44   KGDIFDNSVPQTPHVEFVP--------PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIP 95
            KG +    +P TP  + VP        P L  E   + ++ Q                 P
Sbjct: 1010 KGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGEKGAKGEKGQAGP--------------P 1055

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
             + + G      +    G  G  G+KGE G+ G  G+ G  G KG+PG VG PG  G+PG
Sbjct: 1056 GIGIPGLPGDKGDQGIAGFPGSPGEKGEKGSVGIPGMPGSPGLKGSPGSVGYPGSPGLPG 1115

Query: 156  DEGKRG------------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            ++G +G              G +G PGP G     G++G  G  G PG  G  G  GLPG
Sbjct: 1116 EKGDKGLPGLDGIPGVKGEAGLLGTPGPTGP---AGQKGXPGSDGIPGSAGEKGEPGLPG 1172

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
              G  G PG  G  G  G+ G PG  G PG  G  GE+G 
Sbjct: 1173 R-GFPGFPGAKGDKGAKGEVGFPGLAGSPGIPGAKGEQGF 1211



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 68/128 (53%), Gaps = 19/128 (14%)

Query: 111 PPGL--QGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQGIPGDEGKRGPK 163
           PPG+  Q  + +KG+   KGE G KGE G +G PGV      G PGP+G PG +G +G K
Sbjct: 239 PPGVPGQAQVQEKGDYATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEK 298

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGEPGLDGIP 211
           G  G+PG  G PG  G++GP+GD G              G +G  G  G PG PG  G P
Sbjct: 299 GSPGFPGDPGYPGLVGRQGPQGDKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEP 358

Query: 212 GRNGMDGI 219
           G  G  GI
Sbjct: 359 GPKGFPGI 366



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 61/123 (49%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----DE 178
           EIG  G+ G KG+RG  G  GV G PGPQG PG          MG PG +G PG    D 
Sbjct: 487 EIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGL---------MGQPGAKGEPGEIYFDL 537

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
             +G KGD G+PG+                G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 538 RLKGDKGDPGFPGQ---------------PGVPGRAGSPGRDGHPGLPGPKGSPGSVGLK 582

Query: 239 GEK 241
           GE+
Sbjct: 583 GER 585



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 64/136 (47%), Gaps = 34/136 (25%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
           + GPPG +G+PG  G  GP+GD G+PG  G PG  G++G                     
Sbjct: 644 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 703

Query: 184 KGDM------------GYPGRIGLDGRDGLPGE--PGLDGIPGRNGMDGIPGKDGLPGKD 229
            GDM            G PG  G+ G+ G PG   PGL G+PG  G  G PG+ G  G  
Sbjct: 704 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGIPGTPGTPGEKGSVGAP 763

Query: 230 GIPGTNGTNGEKGMTG 245
           G+PG +G  G  G+ G
Sbjct: 764 GVPGEHGAIGPPGLQG 779



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 86/218 (39%), Gaps = 61/218 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PGL G  G KG  G  G  GVKGE G  G PG  GP G +G PG +G  G  G+ G PG 
Sbjct: 1111 PGLPGEKGDKGLPGLDGIPGVKGEAGLLGTPGPTGPAGQKGXPGSDGIPGSAGEKGEPGL 1170

Query: 171  PQ----GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG-------------------- 206
            P     G PG +G +G KG++G+PG  G  G  G  GE G                    
Sbjct: 1171 PGRGFPGFPGAKGDKGAKGEVGFPGLAGSPGIPGAKGEQGFMGPPGPQGQPGLPGSPGHA 1230

Query: 207  ------------------------------LDGI------PGRNGMDGIPGKDGLPGKDG 230
                                          +DGI      PG  G  G+PG  G PG  G
Sbjct: 1231 REGPKGDRGPQGQPGQPGLPGPMGPPGFPGIDGIKGDKGQPGWPGAPGVPGPKGDPGFQG 1290

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +PG  G+ G  G  G  G  G  G  G  G P +   K
Sbjct: 1291 MPGIGGSPGITGSKGDMGLPGVQGFQGAKGLPGLQGIK 1328



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 63/130 (48%), Gaps = 27/130 (20%)

Query: 157 EGKRGPKGDMGYPGPQGIPGD-----------EGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           +G +G KGD G  GP G+PG            +G++G KG+ G+ G  G+ G  G PG+P
Sbjct: 225 QGPKGDKGDQGVSGPPGVPGQAQVQEKGDYATKGEKGQKGEPGFQGMPGV-GEKGEPGKP 283

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG---------------MTGPRGNR 250
           G  G PG++G  G  G  G PG  G PG  G  G +G                TGP G +
Sbjct: 284 GPRGKPGKDGDKGEKGSPGFPGDPGYPGLVGRQGPQGDKGEAGPPGPPGIVIGTGPLGEK 343

Query: 251 GKSGINGVPG 260
           G+ G  G PG
Sbjct: 344 GERGYPGTPG 353



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 80/196 (40%), Gaps = 62/196 (31%)

Query: 125 GAKGEMGVKGERGEKGA--PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           G  G  GV+G++GE G   PG+ G PG   IPG  G  G KG +G PG   +PG+ G  G
Sbjct: 720 GLPGNPGVQGQKGEPGVGLPGLKGLPG---IPGTPGTPGEKGSVGAPG---VPGEHGAIG 773

Query: 183 P--------------------------------------------------KGDMGYPGR 192
           P                                                  KG+ G+PG 
Sbjct: 774 PPGLQGIRGDPGPPGLPGPMGSPGVPGIGPPGARGPPGGQGPPGLAGPPGIKGEKGFPGF 833

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            GLD   G  G+ G  G+PG  G  G+PG   LPG+ G PG  G  G KG  G  G  G+
Sbjct: 834 PGLD-MPGPKGDKGAQGLPGVTGQSGLPG---LPGQQGTPGLPGFPGSKGEMGVMGTPGQ 889

Query: 253 SGINGVPGTPAICAYK 268
            G  G  G+P I   K
Sbjct: 890 PGSPGPVGSPGIPGVK 905



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 88/198 (44%), Gaps = 54/198 (27%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGK------------- 159
           G KG  G  G  G  GE+G  GAPGV      +GPPG QGI GD G              
Sbjct: 740 GLKGLPGIPGTPGTPGEKGSVGAPGVPGEHGAIGPPGLQGIRGDPGPPGLPGPMGSPGVP 799

Query: 160 -------------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
                                    +G KG  G+PG   +PG +G +G +G  G  G+ G
Sbjct: 800 GIGPPGARGPPGGQGPPGLAGPPGIKGEKGFPGFPGLD-MPGPKGDKGAQGLPGVTGQSG 858

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLP---GKDGIPGTNGTNGEKGMTGPRG 248
           L G  G  G PGL G PG  G  G+   PG+ G P   G  GIPG  G +G  G +GPRG
Sbjct: 859 LPGLPGQQGTPGLPGFPGSKGEMGVMGTPGQPGSPGPVGSPGIPGVKGDHGFPGSSGPRG 918

Query: 249 N---RGKSGINGVPGTPA 263
           +   +G  G  G+PG P 
Sbjct: 919 DPGLKGDKGDVGLPGQPG 936


>gi|397509822|ref|XP_003825311.1| PREDICTED: collagen alpha-2(V) chain [Pan paniscus]
          Length = 1499

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/151 (45%), Positives = 79/151 (52%), Gaps = 6/151 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G+ GE G  G  G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  
Sbjct: 255 GPEGPAGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEV 314

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLP 226
           G PG +G+ GP G MG  G +G  G  G  G  G  G PG+ G  G+PGK       G+P
Sbjct: 315 GAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIP 374

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G PG  G  GE G TG RG  G  G  G
Sbjct: 375 GSSGFPGNPGMKGEAGPTGARGPEGPQGQRG 405



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 78/144 (54%), Gaps = 18/144 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 279 GFAGSPGARGFPGAPGLPGLKGHRGHKG---LEGPKGEVGAPGSKGEAGPTGPMGAMGPL 335

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G           G+ G PG  G  GIPG  G PG  
Sbjct: 336 GPRGMPGERGRLGPQ---GAPGQRGAH---------GMPGKPGPMGPLGIPGSSGFPGNP 383

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKS 253
           G+ G  G  G +G  GP+G RG++
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGET 407



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP         E
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGP---------E 584

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK GP G  G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    
Sbjct: 585 GKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR--- 641

Query: 218 GIPGKDG 224
           G PGKDG
Sbjct: 642 GAPGKDG 648



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 88/219 (40%), Gaps = 72/219 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
            G  G+PG   K GP G +G PG  G  G  G+ GE G                      
Sbjct: 356 RGAHGMPG---KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412

Query: 207 -----------LDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
                       DG PG  G  G PG                          G PG  G+
Sbjct: 413 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 472

Query: 232 PGTNGTNGEKGMTGPR---------GNRGKSGINGVPGT 261
           PG  G  G KG  GP          G  GK G  G PGT
Sbjct: 473 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT 511



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 210 IPGRNG 215
            PG +G
Sbjct: 946 DPGSHG 951



 Score = 42.7 bits (99), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 53/107 (49%), Gaps = 12/107 (11%)

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGM 216
           RGP+G  G PG  G PG  G     G++G+    G  G  G PG PGL G+    G  G+
Sbjct: 254 RGPEGPAGKPGEDGEPGRNGN---PGEVGF---AGSPGARGFPGAPGLPGLKGHRGHKGL 307

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPG 260
           +G  G+ G PG  G  G  G  G  G  GPR   G RG+ G  G PG
Sbjct: 308 EGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPG 354


>gi|114582200|ref|XP_001164152.1| PREDICTED: collagen alpha-2(V) chain isoform 4 [Pan troglodytes]
 gi|410355341|gb|JAA44274.1| collagen, type V, alpha 2 [Pan troglodytes]
          Length = 1499

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/151 (45%), Positives = 79/151 (52%), Gaps = 6/151 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G+ GE G  G  G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  
Sbjct: 255 GPEGPAGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEV 314

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLP 226
           G PG +G+ GP G MG  G +G  G  G  G  G  G PG+ G  G+PGK       G+P
Sbjct: 315 GAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIP 374

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G PG  G  GE G TG RG  G  G  G
Sbjct: 375 GSSGFPGNPGMKGEAGPTGARGPEGPQGQRG 405



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 78/144 (54%), Gaps = 18/144 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
           G  G  G +G  GA G  G+KG RG KG   + GP G  G PG +G+ GP G MG   P 
Sbjct: 279 GFAGSPGARGFPGAPGLPGLKGHRGHKG---LEGPKGEVGAPGSKGEAGPTGPMGAMGPL 335

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP+G+PG+ G+ GP+   G PG+ G           G+ G PG  G  GIPG  G PG  
Sbjct: 336 GPRGMPGERGRLGPQ---GAPGQRGAH---------GMPGKPGPMGPLGIPGSSGFPGNP 383

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKS 253
           G+ G  G  G +G  GP+G RG++
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGET 407



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP         E
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGP---------E 584

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK GP G  G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    
Sbjct: 585 GKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR--- 641

Query: 218 GIPGKDG 224
           G PGKDG
Sbjct: 642 GAPGKDG 648



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 88/219 (40%), Gaps = 72/219 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
            G  G+PG   K GP G +G PG  G  G  G+ GE G                      
Sbjct: 356 RGAHGMPG---KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412

Query: 207 -----------LDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
                       DG PG  G  G PG                          G PG  G+
Sbjct: 413 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 472

Query: 232 PGTNGTNGEKGMTGPR---------GNRGKSGINGVPGT 261
           PG  G  G KG  GP          G  GK G  G PGT
Sbjct: 473 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT 511



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945

Query: 210 IPGRNG 215
            PG +G
Sbjct: 946 DPGSHG 951



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 53/107 (49%), Gaps = 12/107 (11%)

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGM 216
           RGP+G  G PG  G PG  G     G++G+    G  G  G PG PGL G+    G  G+
Sbjct: 254 RGPEGPAGKPGEDGEPGRNGN---PGEVGF---AGSPGARGFPGAPGLPGLKGHRGHKGL 307

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPG 260
           +G  G+ G PG  G  G  G  G  G  GPR   G RG+ G  G PG
Sbjct: 308 EGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPG 354


>gi|297301234|ref|XP_001108092.2| PREDICTED: collagen alpha-1(XIII) chain-like [Macaca mulatta]
          Length = 816

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/153 (46%), Positives = 84/153 (54%), Gaps = 9/153 (5%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY---PGPQ 172
           G+ G  G+ GE G KGE G+ G+PG  G  G +G PG EG +   GPKG+ G     G +
Sbjct: 652 GENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGDPGAEGLQGVPGPKGEAGLDGAKGEK 711

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           GI G++G RGP G  G PG IG+ G  G  GE G  G P   GM G  G  GLPG  G P
Sbjct: 712 GIQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDP---GMTGPTGAAGLPGLHGPP 768

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
           G  G  GE+G  G RG +G  G  G PG  A C
Sbjct: 769 GDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 801



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 91/214 (42%), Gaps = 70/214 (32%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------------VV 145
           +  PPG QG    KGE GA GE G  G +G KG PG                      ++
Sbjct: 532 QVGPPGRQG---DKGEPGAAGEQGPAGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALM 588

Query: 146 GPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGP---------------- 183
           GPPG   +PG  G  G       KG++G PGP   PG +G++GP                
Sbjct: 589 GPPG---LPGQIGPPGAPGIPGQKGEIGLPGP---PGHDGEKGPRGKPGDMGPPGPQGPP 642

Query: 184 --------KGDMGYPGRIGLDG------RDGLP---GEPGLDGIPGRNGMDGIPGKDGLP 226
                   KG+ G+PG  G  G      + G P   GE G  G PG  G+ G+PG  G  
Sbjct: 643 GKDGPPGMKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGDPGAEGLQGVPGPKGEA 702

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G DG  G  G  GEKG  GP G  G  G  GVPG
Sbjct: 703 GLDGAKGEKGIQGEKGDRGPLGLPGTPGPIGVPG 736



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 84/203 (41%), Gaps = 73/203 (35%)

Query: 128 GEMGVKGERGEKGAPGVV---GPPGPQGIPGDEGK----------------------RGP 162
           G++G  G +G+KG PG     GP GP+G  G+ GK                       GP
Sbjct: 531 GQVGPPGRQGDKGEPGAAGEQGPAGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGP 590

Query: 163 ------------------KGDMGYPGPQGIPGDEGKRGP--------------------- 183
                             KG++G PGP   PG +G++GP                     
Sbjct: 591 PGLPGQIGPPGAPGIPGQKGEIGLPGP---PGHDGEKGPRGKPGDMGPPGPQGPPGKDGP 647

Query: 184 ---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGT 237
              KG+ G+PG  G  G  G  G+ G  G  G  G  G PG +GL   PG  G  G +G 
Sbjct: 648 PGMKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGDPGAEGLQGVPGPKGEAGLDGA 707

Query: 238 NGEKGMTGPRGNRGKSGINGVPG 260
            GEKG+ G +G+RG  G+ G PG
Sbjct: 708 KGEKGIQGEKGDRGPLGLPGTPG 730


>gi|149025957|gb|EDL82200.1| rCG28740, isoform CRA_e [Rattus norvegicus]
          Length = 465

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 95/184 (51%), Gaps = 21/184 (11%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GP GQKG IGA G  G+ G++GE G PG  G    PGP+G PG+EG+   KGD G  GP+
Sbjct: 240 GPPGQKGSIGAPGTPGMDGQKGEPGLPGAAGQSGLPGPKGEPGNEGE---KGDAGENGPK 296

Query: 173 GIPGDEGKRG--PKGDMGYPGRIGLDGRDG------------LPGEPGLDGIPGRNGMDG 218
           G  G++G  G    G  G PG  G  G+ G            + GEPG  G  G  G+ G
Sbjct: 297 GDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPG 356

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
           +PG  G  G+ G PG  G  G+ G  GP+G +G+SG  G  G+      K +S +L P  
Sbjct: 357 LPGTKGERGEAGPPG-RGERGDPGAPGPKGKQGESGARGPKGSKGDRGDKGDSGALGPRG 415

Query: 279 ETSQ 282
              Q
Sbjct: 416 PPGQ 419



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 47/91 (51%), Gaps = 10/91 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     E   PGL G  G++GE G  G       RGE+G PG    PGP+G  G+ G R
Sbjct: 344 GFIGPQGEPGLPGLPGTKGERGEAGPPG-------RGERGDPGA---PGPKGKQGESGAR 393

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           GPKG  G  G +G  G  G RGP G  G PG
Sbjct: 394 GPKGSKGDRGDKGDSGALGPRGPPGQKGDPG 424



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 61/134 (45%), Gaps = 34/134 (25%)

Query: 113 GLQGPIGQKGEIGAKGE--MGVKGERGE---------------------KGAPGVVGP-- 147
           G  GP G  GE G  G    G+KGE GE                     KG PG +GP  
Sbjct: 291 GENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQG 350

Query: 148 -PGPQGIPGDEGK--------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            PG  G+PG +G+        RG +GD G PGP+G  G+ G RGPKG  G  G  G  G 
Sbjct: 351 EPGLPGLPGTKGERGEAGPPGRGERGDPGAPGPKGKQGESGARGPKGSKGDRGDKGDSGA 410

Query: 199 DGLPGEPGLDGIPG 212
            G  G PG  G PG
Sbjct: 411 LGPRGPPGQKGDPG 424



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 45/90 (50%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G+PG PG  G PG  G+ G  G  G  G  G PGT G +G+KG  G  G  G+
Sbjct: 212 TGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGTPGMDGQKGEPGLPGAAGQ 271

Query: 253 SGINGVPGTPAICAYKRESCSLLPNSETSQ 282
           SG+ G  G P     K ++    P  +T +
Sbjct: 272 SGLPGPKGEPGNEGEKGDAGENGPKGDTGE 301



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 43/84 (51%), Gaps = 9/84 (10%)

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKDGLPGKDGIPG 233
           D GK GP+G  G PG  G       PGE GL    G PG+ G  G PG  G+ G+ G PG
Sbjct: 211 DTGKDGPRGMPGVPGEPGK------PGEQGLMGPLGPPGQKGSIGAPGTPGMDGQKGEPG 264

Query: 234 TNGTNGEKGMTGPRGNRGKSGING 257
             G  G+ G+ GP+G  G  G  G
Sbjct: 265 LPGAAGQSGLPGPKGEPGNEGEKG 288


>gi|380795065|gb|AFE69408.1| collagen alpha-2(IV) chain preproprotein, partial [Macaca mulatta]
          Length = 1688

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 94/169 (55%), Gaps = 15/169 (8%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     +  PPG +G  G  G  G KG+ G+ G  G+   PG+ GPPG  G PG  G+ 
Sbjct: 770 GFKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGASGQ---PGLSGPPGQHGFPGAPGQE 826

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------LPGEPGLDGIPGRN 214
           GP G  G PG +G+PGD   RG  GD+G PG +G+ G  G      L GE G  G PG  
Sbjct: 827 GPLGLPGIPGLEGLPGD---RGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGHPGSPGFK 883

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
           G+DG+PG  GL G+ G PG +G  G    KG  G  G++G++G  G+PG
Sbjct: 884 GIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPG 932



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 85/149 (57%), Gaps = 6/149 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ G  G  G+ G  G  G++G  G+ G PG +G+PGD   RG  GD+G PGP
Sbjct: 799 PGLPGASGQPGLSGPPGQHGFPGAPGQEGPLGLPGIPGLEGLPGD---RGDPGDIGAPGP 855

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
              +G+ GD G  G  G+ G+PG  G  G DG+PG PGL G  G  GMDG  G  GL G+
Sbjct: 856 VGMKGVSGDRGDAGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGR 915

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG+ G  G  G+ G +G  G+ G  G
Sbjct: 916 PGFPGSKGEAGFFGIPGLKGLAGEPGFKG 944



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 81/151 (53%), Gaps = 6/151 (3%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           + G +G+ GV G+ G KG PG  GPPG +G  G  G  G KG  G PG  G PG     G
Sbjct: 756 QPGPRGDAGVPGQPGFKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGASGQPG---LSG 812

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           P G  G+PG  G +G  GLPG PGL+G+PG     G PG  G PG  G+ G +G  G+ G
Sbjct: 813 PPGQHGFPGAPGQEGPLGLPGIPGLEGLPGDR---GDPGDIGAPGPVGMKGVSGDRGDAG 869

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           + G RG+ G  G  G+ G P     K E  S
Sbjct: 870 LAGERGHPGSPGFKGIDGMPGTPGLKGERGS 900



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 86/158 (54%), Gaps = 14/158 (8%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK----RGPKGDMGYPGPQGIPG 176
            KGE G +G MG+KG  G KG  G+ G PG  GIPG  G+    +G KGD+G PG  G+PG
Sbjct: 966  KGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGAPGIPGLPG 1025

Query: 177  DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-------IPGKDGLPGKD 229
              G  GP G  G+PG IG  G  G PG  GL G  G  G  G       +PG+ GL G+ 
Sbjct: 1026 FPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGPTGDFGDIGDTINLPGRPGLKGEQ 1085

Query: 230  ---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
               GIPG  G  GEKG  G  G  G +G+ GV G P +
Sbjct: 1086 GTAGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGL 1123



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 106/224 (47%), Gaps = 37/224 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G  G  G  G  G  G  G+ G +G PGV G      +PG++G RG +G MG  GP
Sbjct: 1283 PGSKGDAGNPGAPGTPGTKGWAGDSGPQGRPGVFG------LPGEKGPRGEQGFMGNTGP 1336

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-------EPGLDGIPGRNGMDGIPGK-- 222
             G  GD G +GPKGD G+PG  G+ G  G+ G        PG  G  GR G  G PG+  
Sbjct: 1337 AGAVGDRGPKGPKGDPGFPGAPGIVGAPGIAGIPQKIAIPPGTVGPQGRRGPPGAPGEMG 1396

Query: 223  ----------DGLPGKDGIPGTNGTN------GEKGMTGPRGNRGKSGINGVPGTPAICA 266
                       G PGK G  G  G +      G++G  G +G  G+ G  G PG+P +  
Sbjct: 1397 PQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPVGHQGPIGQEGAPGRPGSPGLPG 1456

Query: 267  YKRESCS----LLPNSETSQLLIPPTIVGSEHIFSSSPIVVREG 306
                S S    L+ +S+T Q  + P  VG   ++S   ++  EG
Sbjct: 1457 MPGRSVSIGYLLVKHSQTEQEPMCP--VGMNKLWSGYSLLYFEG 1498



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 81/168 (48%), Gaps = 21/168 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL+G  G  G  G KG  G KG  G+ G PG+ G  G QG PG +G+ G  G  G PG 
Sbjct: 1079 PGLKGEQGTAGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGS 1138

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
            QG PG  G  G KGD G+PG  GL G  GL G  GL G+PG  G  G PG D        
Sbjct: 1139 QGEPGRIGLPGGKGDDGWPGIAGLPGFPGLRGIRGLHGLPGTKGFPGSPGADIHGDPGFP 1198

Query: 224  -------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                          LPG  G+PG  G  G  G  GP G+ G  G  G+
Sbjct: 1199 GPPGDRGDPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGLQGFPGI 1246



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 85/175 (48%), Gaps = 20/175 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP+G  G  G +G  G +G+ G+ GAPG VG  G  G  GD G  G +G  G PG 
Sbjct: 823 PGQEGPLGLPGIPGLEGLPGDRGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGHPGSPGF 882

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +GI G  G  G KG+ G PG  G  G  GL G PG  G  G  G  GIPG  GL G+ G 
Sbjct: 883 KGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGF 942

Query: 232 PGTNG-----------------TNGEKGMTGPRGNR---GKSGINGVPGTPAICA 266
            G+ G                   GEKG  GP G +   G  GI G+PG P +  
Sbjct: 943 KGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSG 997



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 97/218 (44%), Gaps = 55/218 (25%)

Query: 96   LVAMQGFCNSTKEYCPPGLQG------PIGQKGEIG----AKGEMGVKGERGEKGAPGVV 145
            +    GF  S  +   PG  G      P G  G+IG      G  G+KGE+G  G PG+ 
Sbjct: 1035 ITGFPGFIGSRGDKGAPGRAGLYGEIGPTGDFGDIGDTINLPGRPGLKGEQGTAGIPGLK 1094

Query: 146  GPPGPQGIPGDEGKRGPKGDMGYP------GPQGIPGDEGK------RGPKGDMGYPGRI 193
            G           G++G +GD+G+P      G QG PG +G+       GP G  G PGRI
Sbjct: 1095 G---------FFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQGEPGRI 1145

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN--------------- 238
            GL G  G  G PG+ G+PG  G+ GI G  GLPG  G PG+ G +               
Sbjct: 1146 GLPGGKGDDGWPGIAGLPGFPGLRGIRGLHGLPGTKGFPGSPGADIHGDPGFPGPPGDRG 1205

Query: 239  ---------GEKGMTGPRGNRGKSGINGVPGTPAICAY 267
                     G  G+ G +G +G  G  G PG+P +  +
Sbjct: 1206 DPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGLQGF 1243



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 85/164 (51%), Gaps = 33/164 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMG----VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           PGL G  G +G  G KG+ G     +G+   +G PG+ GP G  GI G+ G++G KGD G
Sbjct: 438 PGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGINGEPGRKGDKGDPG 497

Query: 168 ------YPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGL---DGIPGRNG 215
                 +PG +G+PG+ G  GPKG  G    I   G  G+ G+PG PG+   DG PGRNG
Sbjct: 498 QHGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRNG 557

Query: 216 M--------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           +               G PG  G P   GIPGT GT GE G  G
Sbjct: 558 LDGFPGLPGPPGDGIKGPPGDAGYP---GIPGTKGTPGEMGPPG 598



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 90/202 (44%), Gaps = 54/202 (26%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERG---------------------EKGAPGV---VGPP 148
            G  GP+G KG  G +G+ G+ GERG                     E+G+PG+    G P
Sbjct: 851  GAPGPVGMKGVSGDRGDAGLAGERGHPGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMP 910

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------------- 186
            G +G PG  G +G  G  G PG +G+ G+ G +G +GD                      
Sbjct: 911  GLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPIILPGMKDIKGEKG 970

Query: 187  ----MGYPGRIGLDGRDGLPGEPGLDGIPGRNG----MDGIPGKDGLPGKDGIPGTNGTN 238
                MG  G +G  G  G+PG PGL GIPG  G    + G+ G  G PG  G+PG  G  
Sbjct: 971  DEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGAPGIPGLPGFPGVA 1030

Query: 239  GEKGMTGPRGNRGKSGINGVPG 260
            G  G+TG  G  G  G  G PG
Sbjct: 1031 GPPGITGFPGFIGSRGDKGAPG 1052



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 63/129 (48%), Gaps = 16/129 (12%)

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG----YPGRIGLDGRDGLPGEPGLDGI--- 210
           G++G KG  G+PG  G PG  G +G KGD G      G   + G  GLPG  G  GI   
Sbjct: 427 GRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGINGE 486

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS------GINGVPGTPAI 264
           PGR G  G PG+ GLP   G PG  G  G  G  GP+G +G S      G  G PG P +
Sbjct: 487 PGRKGDKGDPGQHGLP---GFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPGVPGV 543

Query: 265 CAYKRESCS 273
              K +  S
Sbjct: 544 PGMKGDDGS 552



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 87/187 (46%), Gaps = 36/187 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL GP G +GE    G +G+ G +G+ G PG+ G      +PG  G RG +G  G PG 
Sbjct: 1130 PGLTGPPGSQGE---PGRIGLPGGKGDDGWPGIAG------LPGFPGLRGIRGLHGLPGT 1180

Query: 172  QGIPGDEGK--------------RGPKGDMG-YPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G PG  G               RG  GD    PG +G+ G+ G  G PG  G PG  G+
Sbjct: 1181 KGFPGSPGADIHGDPGFPGPPGDRGDPGDANTLPGPVGVPGQKGEQGAPGERGPPGSPGL 1240

Query: 217  DGIPG------KDGLPGKDGIPGTNGTNGEKGMTGPR------GNRGKSGINGVPGTPAI 264
             G PG        G PG  G PG  G  G +G  GP       G++G +G  G PGTP  
Sbjct: 1241 QGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDAGNPGAPGTPGT 1300

Query: 265  CAYKRES 271
              +  +S
Sbjct: 1301 KGWAGDS 1307



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 76/173 (43%), Gaps = 39/173 (22%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD----EGKRGPKGDMGYPGPQGIPGDEG 179
            G KG  G  G  G  G+PG  GP G +G  GD    EG    +G  G PGP+G  G  G
Sbjct: 426 FGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDEAVRGLPGLPGPKGFAGING 485

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------------------GRNGMDG 218
           + G KGD G PG+       GLPG PGL G+P                     G  G  G
Sbjct: 486 EPGRKGDKGDPGQ------HGLPGFPGLKGVPGNVGAPGPKGAKGDSRTITTKGERGQPG 539

Query: 219 IPGKDGLPGKDGIPGTNG--------TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           +PG  G+ G DG PG NG             G+ GP G+ G  GI G  GTP 
Sbjct: 540 VPGVPGMKGDDGSPGRNGLDGFPGLPGPPGDGIKGPPGDAGYPGIPGTKGTPG 592



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 72/153 (47%), Gaps = 31/153 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G  G  G  G  G KG+ G+ G PG    PG +G+P         G++G PGP
Sbjct: 472 PGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGF---PGLKGVP---------GNVGAPGP 519

Query: 172 QGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGL--------------DGIPGRN 214
           +G  GD      +G +G  G PG  G+ G DG PG  GL               G PG  
Sbjct: 520 KGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRNGLDGFPGLPGPPGDGIKGPPGDA 579

Query: 215 GMDGIPGKDGLPGKDGIPGTN--GTNGEKGMTG 245
           G  GIPG  G PG+ G PG    G  G++G  G
Sbjct: 580 GYPGIPGTKGTPGEMGPPGLGLPGFKGQRGFPG 612



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 64/134 (47%), Gaps = 19/134 (14%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQG 152
            QGF  +T      G +GP G KG+ G  G  G+ G  G  G        PG VGP G +G
Sbjct: 1328 QGFMGNTGPAGAVGDRGPKGPKGDPGFPGAPGIVGAPGIAGIPQKIAIPPGTVGPQGRRG 1387

Query: 153  IPGDEGK------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
             PG  G+            RG  G  G  G  G+    G RG +G +G+ G IG +G  G
Sbjct: 1388 PPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPVGHQGPIGQEGAPG 1447

Query: 201  LPGEPGLDGIPGRN 214
             PG PGL G+PGR+
Sbjct: 1448 RPGSPGLPGMPGRS 1461



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 9/76 (11%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G +G+ G  G  G  GPPG QG PG +G++G KG+ G P         G  GPKGD+G
Sbjct: 32  EKGGRGQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAP---------GITGPKGDVG 82

Query: 189 YPGRIGLDGRDGLPGE 204
             G  G  G DG+PG 
Sbjct: 83  ARGVSGFPGADGIPGH 98



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 91/255 (35%), Gaps = 81/255 (31%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-PQGIPGDEGKRGPKGDMGYPGP 171
           G +G  GQKG  G  G  G  G RG KG  G +GPPG P   P     +G +GD G+PG 
Sbjct: 287 GEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDLGPPGLPAYSPHPSLAKGARGDPGFPGA 346

Query: 172 QGIPGDE--------------------------GKRGPKGDMGYPG-------------- 191
           QG PG +                          G+ GPKG +G PG              
Sbjct: 347 QGEPGSQGEPGDPGPRGPPGLSIGDEDQRRGLPGEMGPKGFIGDPGIPALYPGPPGPDGK 406

Query: 192 ------------------RIGLDGRDGLPGEPGLDGIPGRNG------------------ 215
                               G  G  G PG PGL G PG  G                  
Sbjct: 407 PGPPGPPGLPGPPGPDGFLFGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGDCRCAEGDE 466

Query: 216 ----MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               + G+PG  G  G +G PG  G  G+ G  G  G  G  G+ G  G P     K +S
Sbjct: 467 AVRGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGAPGPKGAKGDS 526

Query: 272 CSLLPNSETSQLLIP 286
            ++    E  Q  +P
Sbjct: 527 RTITTKGERGQPGVP 541



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 21/121 (17%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           E+G +G PG VGP         +G  GP G  G+PG QG  GD+G+RG  G  G  G +G
Sbjct: 32  EKGGRGQPGPVGP---------QGYNGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVG 82

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG             DGIPG  G  G  G PG +G NG +G +GP+G  G  G
Sbjct: 83  ARGVSGFPG------------ADGIPGHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEG 130

Query: 255 I 255
            
Sbjct: 131 F 131



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 81/207 (39%), Gaps = 65/207 (31%)

Query: 119 GQKGEIGAKGEMG-----------------VKGERGEKGAPGVVGPPGPQGIPGDE---- 157
           G  G  GA+GE G                 +  E   +G PG +GP G  G PG      
Sbjct: 339 GDPGFPGAQGEPGSQGEPGDPGPRGPPGLSIGDEDQRRGLPGEMGPKGFIGDPGIPALYP 398

Query: 158 ----------------------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM-- 187
                                       G++G KG  G+PG  G PG  G +G KGD   
Sbjct: 399 GPPGPDGKPGPPGPPGLPGPPGPDGFLFGRKGAKGTPGFPGLSGSPGARGPKGWKGDAGD 458

Query: 188 --------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                         G PG  G  G +G PG  G  G PG++G+ G PG  G+PG  G PG
Sbjct: 459 CRCAEGDEAVRGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGAPG 518

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G+      +G RG+ G+ GVPG
Sbjct: 519 PKGAKGDSRTITTKGERGQPGVPGVPG 545


>gi|119569211|gb|EAW48826.1| collagen, type IX, alpha 1, isoform CRA_e [Homo sapiens]
          Length = 670

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/195 (43%), Positives = 107/195 (54%), Gaps = 36/195 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKG---------ERGEKG 140
           L  M+G   +  E   PG QG  G++G      E+GA+G  G +G         ++GEKG
Sbjct: 174 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 233

Query: 141 APGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKR------GPKGDMGYPG 191
           A G+ G PGPQG+   PGD+G+RGP G+    GP+G  G EG R      GPKGD G P 
Sbjct: 234 ARGLDGEPGPQGLPGAPGDQGQRGPPGEA---GPKGDRGAEGARGIPGLPGPKGDTGLP- 289

Query: 192 RIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G+DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  G
Sbjct: 290 --GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 347

Query: 246 PRGNRGKSGINGVPG 260
             GN GK G  G PG
Sbjct: 348 QMGNSGKPGQQGPPG 362



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 94/206 (45%), Gaps = 62/206 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------ 166
           GL GP G  G IG+KG+   KGE G  G+ G  GPPG  G+PG+ G+ GP GD       
Sbjct: 83  GLTGPDGSPGSIGSKGQ---KGEPGVPGSRGFPGPPGTAGLPGELGRVGPVGDPGRRGPP 139

Query: 167 ------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                                         GYPG   +PG  G +G KG++G PGR G  
Sbjct: 140 GPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPG---LPGMRGHKGAKGEIGEPGRQGHK 196

Query: 197 GRDG----LPGEPGLDGIPGRNGMDGIPG------------KDGLPGKDGIPGTNGTNGE 240
           G +G    L GE G  G PG  G+ GI G             DG PG  G+PG  G  G+
Sbjct: 197 GEEGDQGEL-GEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGAPGDQGQ 255

Query: 241 K---GMTGPRGNRGKSGINGVPGTPA 263
           +   G  GP+G+RG  G  G+PG P 
Sbjct: 256 RGPPGEAGPKGDRGAEGARGIPGLPG 281



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 84/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA         +GIP   G  GPKGD G
Sbjct: 240 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGA---------RGIP---GLPGPKGDTG 287

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 288 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 347

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GP+   G+RG+ G  G PG P 
Sbjct: 348 QMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 389



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 71/134 (52%), Gaps = 6/134 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  GD G  
Sbjct: 173 GLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEK 232

Query: 191 GRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G  G+ G+    
Sbjct: 233 GARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLP--- 289

Query: 248 GNRGKSGINGVPGT 261
           G  G+ GI G+PGT
Sbjct: 290 GVDGRDGIPGMPGT 303



 Score = 42.7 bits (99), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GPQ
Sbjct: 317 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 370

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PG+
Sbjct: 371 GLPGSRGELGPVGSPGLPGK 390


>gi|327275855|ref|XP_003222687.1| PREDICTED: collagen alpha-1(I) chain-like [Anolis carolinensis]
          Length = 1450

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 85/171 (49%), Gaps = 30/171 (17%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGYPGPQGIPG 176
           ++GE G  G  G +G  G  GAPG  G PG QG+PGD G  GP   +G+ G+PG +G+ G
Sbjct: 616 ERGEQGPAGAPGFQGLPGPAGAPGESGKPGEQGVPGDVGAPGPSGARGERGFPGERGVQG 675

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGK-------- 222
             G  GP+G  G PG  G  G  G PG       PGL G+PG  G  G+PG         
Sbjct: 676 PAGPAGPRGANGAPGNDGAKGDAGAPGAPGNQGPPGLQGMPGERGAAGLPGAKGDRGDPG 735

Query: 223 ----DGLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
               DG PGKDG+ G           G  G+KG  GP G  G +G  G PG
Sbjct: 736 PKGVDGAPGKDGVRGLTGPIGPPGPAGATGDKGEAGPSGPAGPTGARGAPG 786



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 82/172 (47%), Gaps = 21/172 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGDMGYP 169
           G  GP G +G  GA G  G KG+ G  GAPG  GPPG QG+PG+ G  G    KGD G P
Sbjct: 675 GPAGPAGPRGANGAPGNDGAKGDAGAPGAPGNQGPPGLQGMPGERGAAGLPGAKGDRGDP 734

Query: 170 GPQGI---PGDEGKR---------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           GP+G+   PG +G R               G KG+ G  G  G  G  G PG+ G  G  
Sbjct: 735 GPKGVDGAPGKDGVRGLTGPIGPPGPAGATGDKGEAGPSGPAGPTGARGAPGDRGEPGPA 794

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G PG DG PG  G  G  G  G+ G  GP G  G  G  G  G P 
Sbjct: 795 GPAGFAGPPGADGQPGAKGESGDAGAKGDAGAPGPAGATGPPGPAGAVGAPG 846



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/153 (47%), Positives = 82/153 (53%), Gaps = 6/153 (3%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G+ GAKG  G  G  G  G PG  GP GPQG     G  GPKG+ G PG QG  GD 
Sbjct: 375 GSDGQPGAKGATGAPGISGAPGFPGARGPAGPQGP---SGAPGPKGNSGEPGAQGNKGDA 431

Query: 179 GKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G +G   P G  G PG  G +G+ G  GEPG  G+PG  G  G PG  G PG DGI G  
Sbjct: 432 GAKGEPGPAGIQGPPGPPGEEGKRGSRGEPGPAGLPGPAGERGAPGSRGFPGSDGIAGPK 491

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  GE+G  GP G +G  G +G PG P +   K
Sbjct: 492 GPPGERGSPGPAGAKGSPGESGRPGEPGLPGVK 524



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 85/179 (47%), Gaps = 33/179 (18%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------------------GPQGI 153
           +G  G  GA GE G  GERG  GA G VG P                        GP G 
Sbjct: 566 MGFPGPKGAAGEPGKPGERGAPGAVGAVGAPGKDGETGAQGPPGPTGPAGERGEQGPAGA 625

Query: 154 PGDEGKRGPK---GDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGL 207
           PG +G  GP    G+ G PG QG+PGD G  GP   +G+ G+PG  G+ G  G  G  G 
Sbjct: 626 PGFQGLPGPAGAPGESGKPGEQGVPGDVGAPGPSGARGERGFPGERGVQGPAGPAGPRGA 685

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           +G PG +G  G  G  G PG  G PG  G  GE+   G+ G +G+RG  G  GV G P 
Sbjct: 686 NGAPGNDGAKGDAGAPGAPGNQGPPGLQGMPGERGAAGLPGAKGDRGDPGPKGVDGAPG 744



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 79/176 (44%), Gaps = 33/176 (18%)

Query: 112 PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG  G  G KG  GA    G  G  G RG  G  G  G PGP+G  G+ G +G KGD G 
Sbjct: 374 PGSDGQPGAKGATGAPGISGAPGFPGARGPAGPQGPSGAPGPKGNSGEPGAQGNKGDAGA 433

Query: 169 ---------------------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                                      PGP G+PG  G+RG  G  G+PG  G+ G  G 
Sbjct: 434 KGEPGPAGIQGPPGPPGEEGKRGSRGEPGPAGLPGPAGERGAPGSRGFPGSDGIAGPKGP 493

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PGE    G PG  G  G PG+ G PG+ G+PG  G  G  G  GP G  G +G  G
Sbjct: 494 PGE---RGSPGPAGAKGSPGESGRPGEPGLPGVKGLTGSPGSPGPDGKTGPTGPAG 546



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 90/205 (43%), Gaps = 57/205 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD- 165
           G+ GP G  GE G+ G  G KG  GE G PG  G PG +G+      PG +GK GP G  
Sbjct: 486 GIAGPKGPPGERGSPGPAGAKGSPGESGRPGEPGLPGVKGLTGSPGSPGPDGKTGPTGPA 545

Query: 166 --------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------ 199
                               MG+PGP+G  G+ GK G +G  G  G +G  G+D      
Sbjct: 546 GQDGRPGPAGPPGARGQAGVMGFPGPKGAAGEPGKPGERGAPGAVGAVGAPGKDGETGAQ 605

Query: 200 ---------------GLPGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTN--- 238
                          G  G PG  G+PG  G     G PG+ G+PG  G PG +G     
Sbjct: 606 GPPGPTGPAGERGEQGPAGAPGFQGLPGPAGAPGESGKPGEQGVPGDVGAPGPSGARGER 665

Query: 239 ---GEKGMTGPRGNRGKSGINGVPG 260
              GE+G+ GP G  G  G NG PG
Sbjct: 666 GFPGERGVQGPAGPAGPRGANGAPG 690



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 79/168 (47%), Gaps = 18/168 (10%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---------------PG 155
           PPGLQG     GE GA G  G KG+RG+ G  GV G PG  G+                G
Sbjct: 709 PPGLQG---MPGERGAAGLPGAKGDRGDPGPKGVDGAPGKDGVRGLTGPIGPPGPAGATG 765

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D+G+ GP G  G  G +G PGD G+ GP G  G+ G  G DG+ G  GE G  G  G  G
Sbjct: 766 DKGEAGPSGPAGPTGARGAPGDRGEPGPAGPAGFAGPPGADGQPGAKGESGDAGAKGDAG 825

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G PG  G  G  G  G +G  GP G  G  G  G  G P 
Sbjct: 826 APGPAGATGPPGPAGAVGAPGPKGSRGSAGPPGATGFPGAAGRVGPPG 873



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 81/188 (43%), Gaps = 51/188 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---------------KGERGEKGAPGVVGPPGPQGIPGD 156
           PG QG    KG+ GAKGE G                +G RGE         PGP G+PG 
Sbjct: 422 PGAQG---NKGDAGAKGEPGPAGIQGPPGPPGEEGKRGSRGE---------PGPAGLPGP 469

Query: 157 EGKRGPKGDMGYP------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+RG  G  G+P      GP+G PG+ G  GP G  G PG  G  G  GLPG  GL G 
Sbjct: 470 AGERGAPGSRGFPGSDGIAGPKGPPGERGSPGPAGAKGSPGESGRPGEPGLPGVKGLTGS 529

Query: 211 PGRNGMDGIPGKDGLPGKD------------------GIPGTNGTNGEKGMTGPRGNRGK 252
           PG  G DG  G  G  G+D                  G PG  G  GE G  G RG  G 
Sbjct: 530 PGSPGPDGKTGPTGPAGQDGRPGPAGPPGARGQAGVMGFPGPKGAAGEPGKPGERGAPGA 589

Query: 253 SGINGVPG 260
            G  G PG
Sbjct: 590 VGAVGAPG 597



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 77/164 (46%), Gaps = 15/164 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ G +G  G  GA+GE G  GERG +G  G  GP G  G PG++G +G  G  G PG Q
Sbjct: 648 GVPGDVGAPGPSGARGERGFPGERGVQGPAGPAGPRGANGAPGNDGAKGDAGAPGAPGNQ 707

Query: 173 GIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPG------------RNGMD 217
           G PG +G  G +G  G PG  G     G  G+ G PG DG+ G              G  
Sbjct: 708 GPPGLQGMPGERGAAGLPGAKGDRGDPGPKGVDGAPGKDGVRGLTGPIGPPGPAGATGDK 767

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G  G  G  G  G  GE G  GP G  G  G +G PG 
Sbjct: 768 GEAGPSGPAGPTGARGAPGDRGEPGPAGPAGFAGPPGADGQPGA 811



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 85/230 (36%), Gaps = 87/230 (37%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMG 167
            P G  GP G  G+ GAKGE G  G +G+ GAPG     GPPGP G  G  G +G +G  G
Sbjct: 796  PAGFAGPPGADGQPGAKGESGDAGAKGDAGAPGPAGATGPPGPAGAVGAPGPKGSRGSAG 855

Query: 168  YPGPQGIPGDEGK------------------------RGPKGDMGYPGRI---------- 193
             PG  G PG  G+                        +GP+G+ G  GR           
Sbjct: 856  PPGATGFPGAAGRVGPPGPSGNIGLPGPPGPSGKEGAKGPRGETGPAGRAGEAGPVGPPG 915

Query: 194  --------------------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL-- 225
                                      G  G  GLPG+ G  G PG  G  G PGK G   
Sbjct: 916  PPGEKGSPGGDGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSG 975

Query: 226  ----------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                                   G++G PG  G  G  G  GP+G+RG++
Sbjct: 976  PNGERGPPGPMGPPGLAGPPGEAGREGSPGAEGAPGRDGAAGPKGDRGET 1025



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 80/199 (40%), Gaps = 57/199 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G  GP G +G  G  G  G+KG RG  G   A G  GP GP+G PG  G+ G  G +   
Sbjct: 231 GAPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQV--- 287

Query: 170 GPQGIPGDEGKRGP------------------------------------KGDMGYPGRI 193
           GP+G+PG+ G+ GP                                    KG+ G  G  
Sbjct: 288 GPRGLPGERGRPGPAGPAGARGNDGAAGAAGPPGPTGPAGPPGFPGAAGPKGETGAQGSR 347

Query: 194 GLDGRDGLPGE---------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G +G  G  GE               PG DG PG  G  G PG  G PG  G  G  G  
Sbjct: 348 GSEGPQGARGEPGPPGPAGSAGPSGNPGSDGQPGAKGATGAPGISGAPGFPGARGPAGPQ 407

Query: 239 GEKGMTGPRGNRGKSGING 257
           G  G  GP+GN G+ G  G
Sbjct: 408 GPSGAPGPKGNSGEPGAQG 426



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 64/126 (50%), Gaps = 18/126 (14%)

Query: 114 LQGPIGQKGEIGAKGEMGVK---------GERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            QGP G+ GE GA G MG +         G+ GE G PG          PG+ G  GP+G
Sbjct: 187 FQGPPGEPGEAGASGPMGPRGPAGPPGKNGDDGEAGKPGR---------PGERGAPGPQG 237

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G PG  G+PG +G RG  G  G  G  G  G  G PG PG +G PG+ G  G+PG+ G
Sbjct: 238 ARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQVGPRGLPGERG 297

Query: 225 LPGKDG 230
            PG  G
Sbjct: 298 RPGPAG 303



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNR 250
           G DG  G PG PG  G PG  G  G+PG  GLP   G  G  G +G  G+ G  GP+G  
Sbjct: 216 GDDGEAGKPGRPGERGAPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEP 275

Query: 251 GKSGINGVPG 260
           G  G NG PG
Sbjct: 276 GSPGENGAPG 285



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 48/97 (49%), Gaps = 12/97 (12%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           GD G  G  G PG+ G  GP+G  G PG  GL         PG+ G  G +G+DG  G  
Sbjct: 216 GDDGEAGKPGRPGERGAPGPQGARGLPGTAGL---------PGMKGHRGFSGLDGAKGDA 266

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGING 257
           G  G  G PG+ G NG  G  GPR   G RG+ G  G
Sbjct: 267 GPAGPKGEPGSPGENGAPGQVGPRGLPGERGRPGPAG 303


>gi|299782471|ref|NP_001177687.1| collagen, type V, alpha 3b precursor [Danio rerio]
 gi|295815595|gb|ADG36305.1| collagen type V alpha-3b [Danio rerio]
          Length = 1723

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 89/177 (50%), Gaps = 21/177 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG------------ERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GL GP GQ+G  G  G  G KG            ++G  G  G  GP GP G+PG++G +
Sbjct: 565 GLPGPPGQQGIRGIDGVQGSKGNLGPPGEPGAPGQQGNPGFQGFPGPQGPVGVPGEKGPQ 624

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMD 217
           G KG  G PG  G PG  G+ GP G+ G PG  G+ G  G PG  G+   DG+ G  G  
Sbjct: 625 GKKGMKGLPGVDGPPGHPGREGPPGEKGLPGAAGVQGPVGYPGARGVKGADGLRGLKGSK 684

Query: 218 GIPGKDGLPGKDGIPGTNGTNGE------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G+DG PG  G  G  G NG+      +G  GP G +G+SG  G PG   I   K
Sbjct: 685 GEKGEDGFPGAKGEMGAKGDNGDAGAQGMRGEDGPEGPKGQSGPLGEPGPAGIAGEK 741



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 91/162 (56%), Gaps = 15/162 (9%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP------Q 172
           GQ G  G  GE G+ G  G++G PG   PPG QGI G +G +G KG++G PG       Q
Sbjct: 544 GQPGPRGQSGEPGLAGLTGQRGLPG---PPGQQGIRGIDGVQGSKGNLGPPGEPGAPGQQ 600

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI- 231
           G PG +G  GP+G +G PG  G  G+ G+ G PG+DG PG  G +G PG+ GLPG  G+ 
Sbjct: 601 GNPGFQGFPGPQGPVGVPGEKGPQGKKGMKGLPGVDGPPGHPGREGPPGEKGLPGAAGVQ 660

Query: 232 -----PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                PG  G  G  G+ G +G++G+ G +G PG       K
Sbjct: 661 GPVGYPGARGVKGADGLRGLKGSKGEKGEDGFPGAKGEMGAK 702



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 89/168 (52%), Gaps = 18/168 (10%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP----- 162
            E  PPGL G IGQ G  G  G  G  GE+GE G  G++GP G       +G++GP     
Sbjct: 968  ERGPPGLAGAIGQPGRPGTSGGPGPMGEKGEPGDKGLIGPAG------QDGEQGPVGLPG 1021

Query: 163  -------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
                    G+ G  G  G PG +G +G KG+ G PG +G  G +G PG PG+DG  G  G
Sbjct: 1022 AAGPPGPPGEDGDKGETGAPGQKGSKGDKGESGPPGPVGSQGPEGQPGAPGVDGEVGPTG 1081

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G+ G+ G  G  G  G+ G  G +GM GP G +G+SG +G+ G P 
Sbjct: 1082 QQGMYGQKGDEGARGFKGSRGPGGLQGMPGPPGEKGESGNSGLLGPPG 1129



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 89/184 (48%), Gaps = 39/184 (21%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    GAKGEMG KG+ G+ GA G+ G  GP      EG +G  G +G P
Sbjct: 679 GLKGSKGEKGEDGFPGAKGEMGAKGDNGDAGAQGMRGEDGP------EGPKGQSGPLGEP 732

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP------------------ 211
           GP GI G++GK G  G  GYPGR G  G DG PG  G+ G                    
Sbjct: 733 GPAGIAGEKGKLGVPGLPGYPGRQGQKGGDGFPGAVGVPGEKGKKGPPGPAGAAGQRGPN 792

Query: 212 ------------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                       G++G  G  G DG PG  G  G  G  G  G  GP+G  G +G +G+P
Sbjct: 793 GARGARGARGPTGKSGDKGTSGHDGPPGSTGDRGPQGPQGRVGEMGPKGPNGPAGKDGLP 852

Query: 260 GTPA 263
           G P 
Sbjct: 853 GHPG 856



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 69/124 (55%), Gaps = 12/124 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+QGP+G  G  G KG  G++G +G KG  G        G PG +G+ G KGD G  G Q
Sbjct: 658 GVQGPVGYPGARGVKGADGLRGLKGSKGEKGE------DGFPGAKGEMGAKGDNGDAGAQ 711

Query: 173 GIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G+ G++G  GPKG    +G PG  G+ G  G  G PGL G PGR G     G DG PG  
Sbjct: 712 GMRGEDGPEGPKGQSGPLGEPGPAGIAGEKGKLGVPGLPGYPGRQGQK---GGDGFPGAV 768

Query: 230 GIPG 233
           G+PG
Sbjct: 769 GVPG 772



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 92/207 (44%), Gaps = 57/207 (27%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PG--------------- 155
           L+GP G  G  G  G +G  G RG KG  G+ GPPGP+G+   PG               
Sbjct: 434 LKGPPGPLGLTGRPGPLGSPGPRGLKGDHGLTGPPGPRGVLGAPGQNGKPGKRGRGGMDG 493

Query: 156 ---DEGKRGPKGDMGYPGPQGIPGDEGKRG------------------------PKGDMG 188
              + G+ G KGD G+ G  G+PG++G RG                        P+G  G
Sbjct: 494 GRGEPGETGVKGDRGFDGLPGLPGNKGHRGDTGKKGPVGPPGAPGEKGSDGQPGPRGQSG 553

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG------------KDGLPGKDGIPGTNG 236
            PG  GL G+ GLPG PG  GI G +G+ G  G            + G PG  G PG  G
Sbjct: 554 EPGLAGLTGQRGLPGPPGQQGIRGIDGVQGSKGNLGPPGEPGAPGQQGNPGFQGFPGPQG 613

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  GP+G +G  G+ GV G P 
Sbjct: 614 PVGVPGEKGPQGKKGMKGLPGVDGPPG 640



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 84/193 (43%), Gaps = 39/193 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG-------------- 158
           G +GP GQ G +G  G  G+ GE+G+ G PG+ G PG QG  G +G              
Sbjct: 718 GPEGPKGQSGPLGEPGPAGIAGEKGKLGVPGLPGYPGRQGQKGGDGFPGAVGVPGEKGKK 777

Query: 159 ----------KRGP---------------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
                     +RGP                GD G  G  G PG  G RGP+G  G  G +
Sbjct: 778 GPPGPAGAAGQRGPNGARGARGARGPTGKSGDKGTSGHDGPPGSTGDRGPQGPQGRVGEM 837

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G +G  G+ GL G PG+ G  G  GK G PG  G+ G  G  GE G  G RG+ G  
Sbjct: 838 GPKGPNGPAGKDGLPGHPGQRGEPGFQGKTGPPGPTGVVGPQGNTGETGPMGERGHPGSP 897

Query: 254 GINGVPGTPAICA 266
           G  G  G P    
Sbjct: 898 GPAGEQGLPGAAG 910



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 75/147 (51%), Gaps = 18/147 (12%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  G +G  G  GEMG KG  G  G  G+ G PG +G PG +GK GP G  G  G
Sbjct: 818 PPGSTGDRGPQGPQGRVGEMGPKGPNGPAGKDGLPGHPGQRGEPGFQGKTGPPGPTGVVG 877

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           PQ   G+ G+ GP G+ G+PG  G  G  GLP               G  GK+G  G  G
Sbjct: 878 PQ---GNTGETGPMGERGHPGSPGPAGEQGLP---------------GAAGKEGSKGDPG 919

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
             GT+G NG  G+ G RG+RG  G  G
Sbjct: 920 GQGTSGKNGPTGLKGFRGSRGAPGAMG 946



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 80/165 (48%), Gaps = 36/165 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG------------------ERGEKGAPGVVGP---PGP 150
           PG QGP+G  GE G +G+ G+KG                  E+G  GA GV GP   PG 
Sbjct: 609 PGPQGPVGVPGEKGPQGKKGMKGLPGVDGPPGHPGREGPPGEKGLPGAAGVQGPVGYPGA 668

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------- 203
           +G+ G +G RG KG  G  G  G PG +G+ G KGD G  G  G+ G DG  G       
Sbjct: 669 RGVKGADGLRGLKGSKGEKGEDGFPGAKGEMGAKGDNGDAGAQGMRGEDGPEGPKGQSGP 728

Query: 204 --EPGLDGIPGRNGMDGIPGKDGLPGK------DGIPGTNGTNGE 240
             EPG  GI G  G  G+PG  G PG+      DG PG  G  GE
Sbjct: 729 LGEPGPAGIAGEKGKLGVPGLPGYPGRQGQKGGDGFPGAVGVPGE 773



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 86/213 (40%), Gaps = 60/213 (28%)

Query: 112  PGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG QG   P G  G +G +G  G  G  GE+G PG  GP G QG+PG  GK G KGD G 
Sbjct: 861  PGFQGKTGPPGPTGVVGPQGNTGETGPMGERGHPGSPGPAGEQGLPGAAGKEGSKGDPGG 920

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIG---------------------------LDGRDGL 201
             G  G  G  G +G +G  G PG +G                           L G  G 
Sbjct: 921  QGTSGKNGPTGLKGFRGSRGAPGAMGPVGLKGGTGPIGPPGPAGPTGERGPPGLAGAIGQ 980

Query: 202  PGEPGLDGIPGRNGMDGIPG------------------------------KDGLPGKDGI 231
            PG PG  G PG  G  G PG                              +DG  G+ G 
Sbjct: 981  PGRPGTSGGPGPMGEKGEPGDKGLIGPAGQDGEQGPVGLPGAAGPPGPPGEDGDKGETGA 1040

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            PG  G+ G+KG +GP G  G  G  G PG P +
Sbjct: 1041 PGQKGSKGDKGESGPPGPVGSQGPEGQPGAPGV 1073



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 85/190 (44%), Gaps = 48/190 (25%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGI---PGDEGKR 160
            G QGP G+ GE+G KG  G  G         +RGE G  G  GPPGP G+    G+ G+ 
Sbjct: 826  GPQGPQGRVGEMGPKGPNGPAGKDGLPGHPGQRGEPGFQGKTGPPGPTGVVGPQGNTGET 885

Query: 161  GPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR- 213
            GP G+ G+PG       QG+PG  GK G KGD G  G  G +G  GL G  G  G PG  
Sbjct: 886  GPMGERGHPGSPGPAGEQGLPGAAGKEGSKGDPGGQGTSGKNGPTGLKGFRGSRGAPGAM 945

Query: 214  --------------------------NGMDGIPGKDGLPGKDGIPGTNGTNGE---KGMT 244
                                       G+ G  G+ G PG  G PG  G  GE   KG+ 
Sbjct: 946  GPVGLKGGTGPIGPPGPAGPTGERGPPGLAGAIGQPGRPGTSGGPGPMGEKGEPGDKGLI 1005

Query: 245  GPRGNRGKSG 254
            GP G  G+ G
Sbjct: 1006 GPAGQDGEQG 1015



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 78/154 (50%), Gaps = 18/154 (11%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G KGE GA G+ G KG++GE G PG VG  GP+G PG  G  G  G  G  G  G  GDE
Sbjct: 1033 GDKGETGAPGQKGSKGDKGESGPPGPVGSQGPEGQPGAPGVDGEVGPTGQQGMYGQKGDE 1092

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--------- 229
            G RG KG  G PG     G  G+PG PG  G  G +G+ G PG+ G  G           
Sbjct: 1093 GARGFKGSRG-PG-----GLQGMPGPPGEKGESGNSGLLGPPGQFGPRGAQGPSGGQGPP 1146

Query: 230  ---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G+ G  G  GEKG  G  G+ G  G++G  G
Sbjct: 1147 GRPGVRGQPGGVGEKGEDGESGDPGAVGVSGSAG 1180



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 77/171 (45%), Gaps = 39/171 (22%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E  P G QG  GQKG+ GA+G    KG RG  G  G+ GPPG +G  G+ G  GP G  G
Sbjct: 1076 EVGPTGQQGMYGQKGDEGARG---FKGSRGPGGLQGMPGPPGEKGESGNSGLLGPPGQFG 1132

Query: 168  YPGPQ---------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL----- 207
              G Q               G PG  G++G  G+ G PG +G+ G  G  GE G      
Sbjct: 1133 PRGAQGPSGGQGPPGRPGVRGQPGGVGEKGEDGESGDPGAVGVSGSAGEKGEQGEKGDTG 1192

Query: 208  ----------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                            DG  G  G  G+PG  G PG+ G+ G +GT G KG
Sbjct: 1193 PPGAAGSAGARGASGEDGAKGNGGPIGLPGDMGAPGEPGVNGIDGTAGSKG 1243



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 69/143 (48%), Gaps = 21/143 (14%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------------------GYPGPQGIP 175
           G+ G+KG  G  GPPG  G   D G +GP+G +                  G+PG +G P
Sbjct: 805 GKSGDKGTSGHDGPPGSTG---DRGPQGPQGRVGEMGPKGPNGPAGKDGLPGHPGQRGEP 861

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G +GK GP G  G  G  G  G  G  GE G  G PG  G  G+PG  G  G  G PG  
Sbjct: 862 GFQGKTGPPGPTGVVGPQGNTGETGPMGERGHPGSPGPAGEQGLPGAAGKEGSKGDPGGQ 921

Query: 236 GTNGEKGMTGPRGNRGKSGINGV 258
           GT+G+ G TG +G RG  G  G 
Sbjct: 922 GTSGKNGPTGLKGFRGSRGAPGA 944



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 75/163 (46%), Gaps = 52/163 (31%)

Query: 135 ERGEKGAPGVVG-------PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           E+GEKG P VVG       PPG  G+ G +G+RGP       GP G  GD G  GP+   
Sbjct: 331 EKGEKGEPAVVGEGTMVTGPPGLPGVEGPQGERGPT------GPPGRIGDPGDPGPE--- 381

Query: 188 GYPGRIGLDGRDGLPGEPG-LDGIPGRNGMD--------------------------GIP 220
              GR GL G DG+PG PG L  +P ++G D                          G P
Sbjct: 382 ---GRQGLAGADGIPGPPGNLLMLPFQSGGDARLGPVISAQEAQAQAILQHTKLSLKGPP 438

Query: 221 GKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  GL   PG  G PG  G  G+ G+TGP G R   G+ G PG
Sbjct: 439 GPLGLTGRPGPLGSPGPRGLKGDHGLTGPPGPR---GVLGAPG 478



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 87/226 (38%), Gaps = 75/226 (33%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP-------------------- 150
           P G +GP G  G IG  G+ G +G +G  GA G+ GPPG                     
Sbjct: 359 PQGERGPTGPPGRIGDPGDPGPEGRQGLAGADGIPGPPGNLLMLPFQSGGDARLGPVISA 418

Query: 151 ----------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY----- 189
                           +G PG  G  G  G +G PGP+G+ GD G  GP G  G      
Sbjct: 419 QEAQAQAILQHTKLSLKGPPGPLGLTGRPGPLGSPGPRGLKGDHGLTGPPGPRGVLGAPG 478

Query: 190 -------------------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI----------- 219
                              PG  G+ G  G  G PGL G  G  G  G            
Sbjct: 479 QNGKPGKRGRGGMDGGRGEPGETGVKGDRGFDGLPGLPGNKGHRGDTGKKGPVGPPGAPG 538

Query: 220 -PGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G DG P   G+ G PG  G  G++G+ GP G +G  GI+GV G+
Sbjct: 539 EKGSDGQPGPRGQSGEPGLAGLTGQRGLPGPPGQQGIRGIDGVQGS 584



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 70/176 (39%), Gaps = 54/176 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG------------------APGVVGPPGPQGIP 154
            G  G  G  G +G  G  G KGE+GEKG                    G  G  GP G+P
Sbjct: 1162 GEDGESGDPGAVGVSGSAGEKGEQGEKGDTGPPGAAGSAGARGASGEDGAKGNGGPIGLP 1221

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------------------M 187
                     GDMG PG  G+ G +G  G KGD                           +
Sbjct: 1222 ---------GDMGAPGEPGVNGIDGTAGSKGDAGDPGKPGPPGPFGEPGPPGRPGRRGHL 1272

Query: 188  GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G PG+ G  G  G  G PG +GI G+ G  G  G  G PG  G+PG  G  GE+G+
Sbjct: 1273 GPPGKEGRPGLKGDKGAPGYEGIIGKPGPVGGQGTSGKPGPQGLPGIPGPAGEQGL 1328



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 84/172 (48%), Gaps = 36/172 (20%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG----IP-- 175
           G  G  G  G +GERG  G PG +G P   G PG EG++G  G  G PGP G    +P  
Sbjct: 349 GPPGLPGVEGPQGERGPTGPPGRIGDP---GDPGPEGRQGLAGADGIPGPPGNLLMLPFQ 405

Query: 176 --GD-------------------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
             GD                         +G  GP G  G PG +G  G  GL G+ GL 
Sbjct: 406 SGGDARLGPVISAQEAQAQAILQHTKLSLKGPPGPLGLTGRPGPLGSPGPRGLKGDHGLT 465

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G+ G PG++G PGK G  G +G  GE G TG +G+RG  G+ G+PG
Sbjct: 466 GPPGPRGVLGAPGQNGKPGKRGRGGMDGGRGEPGETGVKGDRGFDGLPGLPG 517


>gi|291244784|ref|XP_002742276.1| PREDICTED: type IV collagen alpha 5-like [Saccoglossus kowalevskii]
          Length = 1682

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 96/180 (53%), Gaps = 18/180 (10%)

Query: 96  LVAMQGFCNSTKEYCPPGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
           L    G      E  PPGL   QG  G  G +G KG+MG  G  G+ G+PG+   PG +G
Sbjct: 806 LPGQPGLPGRDGERGPPGLPGMQGRDGFPGLVGEKGDMGPIGPAGQPGSPGL---PGDRG 862

Query: 153 IPGDEG---KRGPKG------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            PG +G   ++GP G      D G  GP+G PGD  + GPKGD   PG  G  G  GLPG
Sbjct: 863 FPGRDGLPGRQGPPGSPGVIGDKGNTGPRGEPGDSSEVGPKGD---PGLSGTPGDPGLPG 919

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G PG NG  G+PG  G  G  G+PG +G  G+ G+ G  G +G  G++GVPG P 
Sbjct: 920 AAGPPGTPGLNGAPGLPGFKGDIGPIGLPGASGPPGQPGLNGAPGEKGMDGVDGVPGRPG 979



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 96/204 (47%), Gaps = 52/204 (25%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G IG KG +G+KG  G KG  G+KG  G +GPPG +G  G  G+ G  G+ G PG  
Sbjct: 265 GFPGMIGMKGSMGSKGSPGFKGSIGKKGEQGPIGPPGKRGKDGPAGRFGSPGEKGQPGIP 324

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------------EPGLDGIPGRN 214
           G+PG  G  GPKGD G  GR GL G  G PG                  EPG  G+PG  
Sbjct: 325 GLPGSPGLSGPKGDTGPRGRNGLQGPPGDPGNGDGIGDPGPPGPQGRDGEPGRPGLPGMK 384

Query: 215 GMDGIPGKD--------------------------GLPGKDGIPGTNGTNGEKGMTGPRG 248
           G  G  G+D                          G PG  GIPG +G  GE G +GP+G
Sbjct: 385 GFQGERGRDGFPGPPGQPGPIGPAGSPGSGDKGESGEPGMPGIPGQSGVPGESGRSGPKG 444

Query: 249 NRGKSGI--------NGVPGTPAI 264
           +RG  GI        +G+PG+P +
Sbjct: 445 DRGMPGITRVGPPGMDGLPGSPGL 468



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/131 (50%), Positives = 75/131 (57%), Gaps = 9/131 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP G  G IG KG  G +GE G+    G  G PG  G PGD G  G  G  G PG 
Sbjct: 870 PGRQGPPGSPGVIGDKGNTGPRGEPGDSSEVGPKGDPGLSGTPGDPGLPGAAGPPGTPGL 929

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G PG  G    KGD+G    IGL G  G PG+PGL+G PG  GMDG+   DG+PG+ G 
Sbjct: 930 NGAPGLPGF---KGDIGP---IGLPGASGPPGQPGLNGAPGEKGMDGV---DGVPGRPGQ 980

Query: 232 PGTNGTNGEKG 242
           PG +G NG KG
Sbjct: 981 PGRDGFNGGKG 991



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 84/169 (49%), Gaps = 22/169 (13%)

Query: 112 PGLQGPIGQKGEIGAK----------------GEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           PGL GP GQ G+ G                  G+ G+ G  GE+G PG+   PG QG  G
Sbjct: 776 PGLNGPAGQPGQKGESGFGGGDPGEPGDRGLPGQPGLPGRDGERGPPGL---PGMQGRDG 832

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G  G KGDMG  GP G PG  G     GD G+PGR GL GR G PG PG+ G  G  G
Sbjct: 833 FPGLVGEKGDMGPIGPAGQPGSPGL---PGDRGFPGRDGLPGRQGPPGSPGVIGDKGNTG 889

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G PG     G  G PG +GT G+ G+ G  G  G  G+NG PG P  
Sbjct: 890 PRGEPGDSSEVGPKGDPGLSGTPGDPGLPGAAGPPGTPGLNGAPGLPGF 938



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 89/175 (50%), Gaps = 43/175 (24%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM-------GYPGPQG 173
           KG  G  G+ G+KG+ G  G PG+ GP    G PG +G+ G  G         G PG  G
Sbjct: 755 KGFPGLPGDPGIKGDSGTPGVPGLNGP---AGQPGQKGESGFGGGDPGEPGDRGLPGQPG 811

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------------EPGLDGIPGRNGMDG 218
           +PG +G+RGP      PG  G+ GRDG PG               +PG  G+PG  G   
Sbjct: 812 LPGRDGERGP------PGLPGMQGRDGFPGLVGEKGDMGPIGPAGQPGSPGLPGDRG--- 862

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS---------GINGVPGTPAI 264
            PG+DGLPG+ G PG+ G  G+KG TGPRG  G S         G++G PG P +
Sbjct: 863 FPGRDGLPGRQGPPGSPGVIGDKGNTGPRGEPGDSSEVGPKGDPGLSGTPGDPGL 917



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 86/200 (43%), Gaps = 41/200 (20%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KG MG  G++G+KG PG++G  G  G  G  G +G  G  G  GP G PG  GK GP G 
Sbjct: 252 KGAMGEPGDKGDKGFPGMIGMKGSMGSKGSPGFKGSIGKKGEQGPIGPPGKRGKDGPAGR 311

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIP------GRNGMDGIPGKDG---------------- 224
            G PG  G  G  GLPG PGL G        GRNG+ G PG  G                
Sbjct: 312 FGSPGEKGQPGIPGLPGSPGLSGPKGDTGPRGRNGLQGPPGDPGNGDGIGDPGPPGPQGR 371

Query: 225 --LPGKDGIPGTNGTNGEKG-----------------MTGPRGNRGKSGINGVPGTPAIC 265
              PG+ G+PG  G  GE+G                  +   G++G+SG  G+PG P   
Sbjct: 372 DGEPGRPGLPGMKGFQGERGRDGFPGPPGQPGPIGPAGSPGSGDKGESGEPGMPGIPGQS 431

Query: 266 AYKRESCSLLPNSETSQLLI 285
               ES    P  +     I
Sbjct: 432 GVPGESGRSGPKGDRGMPGI 451



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 81/173 (46%), Gaps = 33/173 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
           GL GP G KG+ G KGE G  G+ G KG  G+      QG PG +G+RG           
Sbjct: 186 GLNGPKGDKGDDGMKGENGFPGQPGTKGEMGIDF----QGPPGAKGERGPPGPPGDSRQP 241

Query: 162 ---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
              P       G  G PGD      KGD G+PG IG+ G  G  G PG  G  G+ G  G
Sbjct: 242 HIEPNSTYNVKGAMGEPGD------KGDKGFPGMIGMKGSMGSKGSPGFKGSIGKKGEQG 295

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             G  G  GKDG  G  G+ GEKG         + GI G+PG+P +   K ++
Sbjct: 296 PIGPPGKRGKDGPAGRFGSPGEKG---------QPGIPGLPGSPGLSGPKGDT 339



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 65/125 (52%), Gaps = 32/125 (25%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           KG +GEK  P ++GPPG      D+G  GP+G  G PG   +PG  G  GP         
Sbjct: 524 KGLKGEKCGPCLIGPPG------DKGDPGPQGTSGTPG---LPGPTGVAGP--------- 565

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG--------IPGTNGTNGEKGMT 244
           +G  G +G PG PG DGI GR      PG+ GLPG+DG        +PG  G +G  G +
Sbjct: 566 VGGKGSEGFPGPPGQDGINGR------PGQPGLPGRDGSKGEAGPILPGGAGPSGPIGPS 619

Query: 245 GPRGN 249
           G +G+
Sbjct: 620 GAKGD 624



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 16/81 (19%)

Query: 119  GQKGEIG----------AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            GQKGE G           KGE G+ G +G  G  G  GPPG +G PG++G  GP+G  G+
Sbjct: 1356 GQKGEPGPLPDMSTMKGTKGEPGLPGRQGSPGEIGPAGPPGIRGFPGEKGNLGPRGGQGF 1415

Query: 169  PGPQGIPGDEGKRGPKGDMGY 189
                G+PGD    GPKG+ G+
Sbjct: 1416 ---NGLPGDP---GPKGNQGF 1430


>gi|340730044|ref|XP_003403299.1| PREDICTED: collagen alpha-2(IV) chain-like isoform 1 [Bombus
           terrestris]
          Length = 894

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 96/194 (49%), Gaps = 48/194 (24%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDMGYPGPQG 173
           QKG  G +GE G +G++G+KG PG  G PG  G PG EG+ G      PKG++G+P   G
Sbjct: 398 QKGSKGEQGERGDEGKQGQKGEPGERGFPGQDGSPGSEGRSGLPGFPGPKGEIGFP---G 454

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR------------------NG 215
           +PG +G +G +G+ G  G  G+ G+ G  GEPG DG+PG                    G
Sbjct: 455 VPGPQGLQGLRGEAGALGPPGIQGQKGEAGEPGRDGLPGSMVGSILPGPPGPEGPRGSPG 514

Query: 216 MDGIP------------------GKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRGKSG 254
            DG+P                  GKDG PG  G PG+ G+    GE G+ GPRG  G  G
Sbjct: 515 EDGLPGVKGEPGPVGPPGLPGLQGKDGAPGSLGPPGSQGSPGLPGEPGVPGPRGIEGAIG 574

Query: 255 INGVPGTPAICAYK 268
             G+PG     A K
Sbjct: 575 KPGLPGLDGRSAEK 588



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 77/162 (47%), Gaps = 31/162 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G  G  G  GE G  GERG +G  G+ G PG  G PG +G  G +G  G PG 
Sbjct: 661 PGVSGPRGASGAPGLPGERGPPGERGPEGQMGLPGIPGKDGAPGLQGPPGIRGQTGMPGV 720

Query: 172 QGIPG-----------------------DEGKRGPKG-----DMGYPGRIGLDGRDGLPG 203
           QG PG                        EG RGP G       G PGRIG  G   +PG
Sbjct: 721 QGPPGRSIIESEIREICTSVLREKLKTLTEGLRGPPGLPGLARQGRPGRIGTQG---IPG 777

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           +PGL G+PG  G  G+PG  G  G  G PG  G  G+KG  G
Sbjct: 778 DPGLPGLPGERGFVGLPGPQGAIGPQGSPGERGEKGDKGQEG 819



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 89/206 (43%), Gaps = 57/206 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEGKRGP------ 162
           PG +G  GQ G  G++G  G+ G    +GE G PGV GP G QG+ G+ G  GP      
Sbjct: 420 PGERGFPGQDGSPGSEGRSGLPGFPGPKGEIGFPGVPGPQGLQGLRGEAGALGPPGIQGQ 479

Query: 163 KGDMGYPGPQGIPGD------------------------------------------EGK 180
           KG+ G PG  G+PG                                           +GK
Sbjct: 480 KGEAGEPGRDGLPGSMVGSILPGPPGPEGPRGSPGEDGLPGVKGEPGPVGPPGLPGLQGK 539

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            G  G +G PG     G  GLPGEP   G+PG  G++G  GK GLPG DG     G  G 
Sbjct: 540 DGAPGSLGPPGS---QGSPGLPGEP---GVPGPRGIEGAIGKPGLPGLDGRSAEKGDRGH 593

Query: 241 KGMTGPRGNRGKSGINGVPGTPAICA 266
           +G  GP G RG  G  G PG P +  
Sbjct: 594 QGEQGPVGPRGLPGSVGAPGLPGVAG 619



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 89/209 (42%), Gaps = 40/209 (19%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
           +QG   +     PPG QG  G  GE G  G  G++G  G+ G PG+ G    +G  G +G
Sbjct: 536 LQGKDGAPGSLGPPGSQGSPGLPGEPGVPGPRGIEGAIGKPGLPGLDGRSAEKGDRGHQG 595

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKG------------------------DM------- 187
           ++GP G  G PG  G PG  G  G  G                        DM       
Sbjct: 596 EQGPVGPRGLPGSVGAPGLPGVAGIPGLEGRPGPPGAPGPPGPAGPPGTISDMLNTNNIL 655

Query: 188 ---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
              G PG  G  G  G PG PG  G PG  G +G  G  G+PGKDG PG  G  G +G T
Sbjct: 656 ETIGSPGVSGPRGASGAPGLPGERGPPGERGPEGQMGLPGIPGKDGAPGLQGPPGIRGQT 715

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRESCS 273
                 G  G+ G PG   I +  RE C+
Sbjct: 716 ------GMPGVQGPPGRSIIESEIREICT 738



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 75/165 (45%), Gaps = 37/165 (22%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  GV G RG  GAPG+   PG +G PG+ G  G  G  G PG  G PG +G  G +G  
Sbjct: 659 GSPGVSGPRGASGAPGL---PGERGPPGERGPEGQMGLPGIPGKDGAPGLQGPPGIRGQT 715

Query: 188 GYPGRIGLDGR-----------------------DGLPGEPGLDGI-----PGRNGMDGI 219
           G PG  G  GR                       +GL G PGL G+     PGR G  GI
Sbjct: 716 GMPGVQGPPGRSIIESEIREICTSVLREKLKTLTEGLRGPPGLPGLARQGRPGRIGTQGI 775

Query: 220 PGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           PG  GLPG        G+PG  G  G +G  G RG +G  G  GV
Sbjct: 776 PGDPGLPGLPGERGFVGLPGPQGAIGPQGSPGERGEKGDKGQEGV 820



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 101/222 (45%), Gaps = 62/222 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL+G  G++G++G +G     G RG  G PG  G  GP G+PG +G+ G +GDMG+PG 
Sbjct: 298 PGLRGSPGEQGKVGPQG---FTGARGFPGNPGPKGSIGPIGLPGAKGENGERGDMGFPGL 354

Query: 172 QG--------------------------IP---------------GDEGKRGPKGDMGYP 190
           +G                          IP               G +G++G +GD    
Sbjct: 355 KGDQGLPGPQGYPGPPGPPGKISDYRDAIPKFVGPPGSPGYPGQKGSKGEQGERGD---- 410

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                +G+ G  GEPG  G PG+   DG PG +G  G  G PG  G  G  G+ GP+G +
Sbjct: 411 -----EGKQGQKGEPGERGFPGQ---DGSPGSEGRSGLPGFPGPKGEIGFPGVPGPQGLQ 462

Query: 251 GKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGS 292
           G  G  G  G P I   K E+       E  +  +P ++VGS
Sbjct: 463 GLRGEAGALGPPGIQGQKGEA------GEPGRDGLPGSMVGS 498



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 103/259 (39%), Gaps = 95/259 (36%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------ 144
           V  QGF  +      PG +G IG  G  GAKGE    GERG+ G PG+            
Sbjct: 310 VGPQGFTGARGFPGNPGPKGSIGPIGLPGAKGEN---GERGDMGFPGLKGDQGLPGPQGY 366

Query: 145 --------------------------------VGPPGPQGIPGDEGKRGPK---GDMGYP 169
                                            G  G QG  GDEGK+G K   G+ G+P
Sbjct: 367 PGPPGPPGKISDYRDAIPKFVGPPGSPGYPGQKGSKGEQGERGDEGKQGQKGEPGERGFP 426

Query: 170 GPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIP 220
           G  G PG EG+       GPKG++G+PG  G  G  GL GE G     GI G+ G  G P
Sbjct: 427 GQDGSPGSEGRSGLPGFPGPKGEIGFPGVPGPQGLQGLRGEAGALGPPGIQGQKGEAGEP 486

Query: 221 GKDGLPG---------------------KDGIPGT---------------NGTNGEKGMT 244
           G+DGLPG                     +DG+PG                 G +G  G  
Sbjct: 487 GRDGLPGSMVGSILPGPPGPEGPRGSPGEDGLPGVKGEPGPVGPPGLPGLQGKDGAPGSL 546

Query: 245 GPRGNRGKSGINGVPGTPA 263
           GP G++G  G+ G PG P 
Sbjct: 547 GPPGSQGSPGLPGEPGVPG 565



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 91/245 (37%), Gaps = 79/245 (32%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGP---- 150
            + GF     E   PG+ GP G    +GE GA G  G++G++GE G PG  G PG     
Sbjct: 439 GLPGFPGPKGEIGFPGVPGPQGLQGLRGEAGALGPPGIQGQKGEAGEPGRDGLPGSMVGS 498

Query: 151 --------------------------------------QGIPGDEGKRGPKGDMGYPGPQ 172
                                                 QG  G  G  GP G  G PG  
Sbjct: 499 ILPGPPGPEGPRGSPGEDGLPGVKGEPGPVGPPGLPGLQGKDGAPGSLGPPGSQGSPGLP 558

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLPGKD 229
           G PG  G RG +G +G PG  GLDGR    G+ G  G  G  G  G+PG     GLPG  
Sbjct: 559 GEPGVPGPRGIEGAIGKPGLPGLDGRSAEKGDRGHQGEQGPVGPRGLPGSVGAPGLPGVA 618

Query: 230 GIPGTNG-------------------------------TNGEKGMTGPRGNRGKSGINGV 258
           GIPG  G                               T G  G++GPRG  G  G+ G 
Sbjct: 619 GIPGLEGRPGPPGAPGPPGPAGPPGTISDMLNTNNILETIGSPGVSGPRGASGAPGLPGE 678

Query: 259 PGTPA 263
            G P 
Sbjct: 679 RGPPG 683


>gi|148672266|gb|EDL04213.1| procollagen, type II, alpha 1, isoform CRA_b [Mus musculus]
          Length = 1439

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/181 (42%), Positives = 89/181 (49%), Gaps = 30/181 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           P G  GP G  G+ GAKG+ G  G++G+ GAPG  GP   PGPQG  G  G +G +G  G
Sbjct: 784 PAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQG 843

Query: 168 YPGPQGIPGDEG---------------------KRGPK---GDMGYPGRI---GLDGRDG 200
            PG  G PG  G                     K GPK   GD G PGR    GL G  G
Sbjct: 844 PPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLQGPAG 903

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PGE G  G  G +G+DG PG  GL G+ GI G  G  GE+G  G  G  G+ G  G PG
Sbjct: 904 APGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 963

Query: 261 T 261
            
Sbjct: 964 A 964



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 85/193 (44%), Gaps = 48/193 (24%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQ 172
           GP G  G  GA+G  G +GE G  G  G  GPPG  G PG   D+G+ G KGD G PGPQ
Sbjct: 759 GPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQ 818

Query: 173 G---IPGDE------------GKRGPKGDMGYPGRIGL---------------------- 195
           G    PG +            G +GP G  G+PG  G                       
Sbjct: 819 GPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKD 878

Query: 196 --------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                    G  G  G+PGL G  G  G  G PG DG  G DG PG  G  G++G+ G  
Sbjct: 879 GPKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLP 938

Query: 248 GNRGKSGINGVPG 260
           G RG+ G  G+PG
Sbjct: 939 GQRGERGFPGLPG 951



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 88/190 (46%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPK--------- 163
           GP+G KG+ G  G  G KG++G KG     GP GPQG P   G+EGKRG +         
Sbjct: 399 GPLGPKGQAGEPGIAGFKGDQGPKG---ETGPAGPQGAPGPAGEEGKRGARGEPGGAGPI 455

Query: 164 ---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMD 217
              G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ 
Sbjct: 456 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTGPKGANGDPGRPGEPGLPGARGLT 515

Query: 218 GIPG---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG                             G PG  G PG  G NGE G  G +G  
Sbjct: 516 GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLA 575

Query: 251 GKSGINGVPG 260
           G  G+ G+PG
Sbjct: 576 GAPGLRGLPG 585



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 87/209 (41%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGK------------- 159
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG +G              
Sbjct: 327 GEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 386

Query: 160 --------------------------------RGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                           +GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 387 GPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGEEGKRGAR 446

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 447 GEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTGPKGANGDPGR---P 503

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 504 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 532



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 640 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPG 699

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 700 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 759

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 760 PPGPSGSTGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKG 810

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 811 DAGAPGPQGPSGAPG 825



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 702 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 755

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 756 GEVGPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQK---GDA 812

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 813 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 855



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 88/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 803  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGA 862

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G+ GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 863  NGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGP 922

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 923  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 982

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 983  AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1013



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 666 GLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGP---------- 715

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 716 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGARGAP 773

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 774 GERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQG 828



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 88/209 (42%), Gaps = 60/209 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 474 GLAGPKGAPGERGPSGLTGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 533

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM- 216
                         +G PG  G  GPKG  G PG+ G     GL G PGL G+PG++G  
Sbjct: 534 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAG---EKGLAGAPGLRGLPGKDGET 590

Query: 217 -----------------DGIPGK---------------------DGLPGKDGIPGTNGTN 238
                             G PG                       G+PG+ G PG  G  
Sbjct: 591 GAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPR 650

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAI 264
           GE+G  G RG+ G  G+    G+PGTP  
Sbjct: 651 GERGFPGERGSPGAQGLQGPRGLPGTPGT 679



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 99/240 (41%), Gaps = 75/240 (31%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGE-- 138
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE  
Sbjct: 700 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 759

Query: 139 ----------KGAP---GVVGPPGPQGIP------------GDEGKRGPKGDMGYPGPQG 173
                     +GAP   G  GPPGP G              GD+G+ G KGD G PGPQG
Sbjct: 760 PPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 819

Query: 174 IPGDEGKRGP---------KGDMGYPGRIGLDG------------------------RDG 200
             G  G +GP         +G  G PG  G  G                        +DG
Sbjct: 820 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDG 879

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ GI G+PG
Sbjct: 880 PKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPG 939



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 639 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPP 698

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 699 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 758

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 759 GPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEA 806



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 78/188 (41%), Gaps = 60/188 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
            PGLQGP G  GE         KGE G+ G  G+ GPPGPQG+ G  G      +RG +G 
Sbjct: 896  PGLQGPAGAPGE---------KGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGF 946

Query: 166  MGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGI 210
             G PGP G PG +G  G  GD                G PGR G          PG DG 
Sbjct: 947  PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADGP 997

Query: 211  PGRNGMDGIPGKDG---------------------LPGKDGIPGTNGTNGEKGMTGPRGN 249
            PGR+G  G+ G  G                       GK G  G  G  G  G +GP G 
Sbjct: 998  PGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGA 1057

Query: 250  RGKSGING 257
            RG +G  G
Sbjct: 1058 RGIAGPQG 1065



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 75/192 (39%), Gaps = 60/192 (31%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G       +G PG+ G  GP G  G PG  GIPG +G       
Sbjct: 326 KGEAGPTGARGPEGAQGS------RGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 379

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GE    G  G PG  G 
Sbjct: 380 AGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGE 439

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGK 252
           +                     G PG  G PG+DG+ G  G  GE+   G+TGP+G  G 
Sbjct: 440 EGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTGPKGANGD 499

Query: 253 SGINGVPGTPAI 264
            G  G PG P  
Sbjct: 500 PGRPGEPGLPGA 511



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 90/226 (39%), Gaps = 84/226 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+             G +G+ 
Sbjct: 549 GQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQ 608

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QGIPG+ G  G   P+G+ G+PG        GL 
Sbjct: 609 GAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 668

Query: 197 GRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GKD 223
           G  GLPG PG D                     G+PG  G  GI             G +
Sbjct: 669 GPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 728

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 729 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGARGAPG 774



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 83/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 236 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 295

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +G +G+ G PG  G 
Sbjct: 296 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGP 355

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 356 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGI 412

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 413 AGFKGDQGPKGETGPAGPQGAPG-PAGEEGKR 443



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 54/114 (47%), Gaps = 24/114 (21%)

Query: 133 KGERGEKGAPGVVGPP---------------GPQGIPGDEGKR---GPKGDMGYPGPQGI 174
           +G  GE G PGV GP                G  G PG  G+R   GP+G  G+PG  G+
Sbjct: 176 QGNPGEPGEPGVSGPMGPRGPPGPAGKPGDDGEAGKPGKSGERGLPGPQGARGFPGTPGL 235

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG +G R      GYPG  G  G  G PG  G  G PG NG  G  G  GLPG+
Sbjct: 236 PGVKGHR------GYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGE 283


>gi|348550178|ref|XP_003460909.1| PREDICTED: collagen alpha-3(V) chain-like [Cavia porcellus]
          Length = 1477

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 88/169 (52%), Gaps = 12/169 (7%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIP--- 154
            G   +  E  P GL+GP G  GE G+ G  G KG  G  G PG  G PGP+   G P   
Sbjct: 938  GPPGARGEDGPEGLKGPEGLPGEEGSPGAAGEKGNLGVPGLPGYPGRPGPKGSTGFPGAL 997

Query: 155  ---GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
               G++G+RG  G  G  G +G PG  G+RG  G  G PG  G  G+DG PG PG  G+P
Sbjct: 998  GPLGEKGRRGKAGQQGQDGERGPPGARGERGQPGATGQPGPKGDVGQDGSPGVPGEKGLP 1057

Query: 212  GRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G PG  G P   GKDG+PG  G  GE G  G  G  G +G+ G
Sbjct: 1058 GLQGPPGFPGSKGPPGPQGKDGVPGHPGQRGELGFQGQTGPPGPAGVLG 1106



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/152 (44%), Positives = 84/152 (55%), Gaps = 5/152 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG----PQGIPGDEGKRGPKGDMGY 168
            G  GP G +GE G +G  G +G  GE+G+PG  G  G    P G+PG  G+ GPKG  G+
Sbjct: 935  GQPGPPGARGEDGPEGLKGPEGLPGEEGSPGAAGEKGNLGVP-GLPGYPGRPGPKGSTGF 993

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG  G  G++G+RG  G  G  G  G  G  G  G+PG  G PG  G  G  G  G+PG+
Sbjct: 994  PGALGPLGEKGRRGKAGQQGQDGERGPPGARGERGQPGATGQPGPKGDVGQDGSPGVPGE 1053

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+PG  G  G  G  GP G +GK G+ G PG
Sbjct: 1054 KGLPGLQGPPGFPGSKGPPGPQGKDGVPGHPG 1085



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 84/176 (47%), Gaps = 36/176 (20%)

Query: 112  PGLQGPIGQKGEI------------------GAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            PG +GP G+KG                    G  G  G++GE+GE G           G 
Sbjct: 871  PGPEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGHRGLQGEKGETGV---------DGF 921

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGD---EGKRGPK---GDMGYPGRIGLDGRDGLPGEPGL 207
            PG +G  GPKGD G PGP G  G+   EG +GP+   G+ G PG  G  G  G+PG PG 
Sbjct: 922  PGFKGDMGPKGDWGQPGPPGARGEDGPEGLKGPEGLPGEEGSPGAAGEKGNLGVPGLPGY 981

Query: 208  DGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG  G  G PG  G     G+ G  G  G +GE+G  G RG RG+ G  G PG
Sbjct: 982  PGRPGPKGSTGFPGALGPLGEKGRRGKAGQQGQDGERGPPGARGERGQPGATGQPG 1037



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 73/144 (50%), Gaps = 6/144 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G KG  G  G +G  GE+G +G  G  G  G +G PG  G+RG  G  G PGP
Sbjct: 979  PGYPGRPGPKGSTGFPGALGPLGEKGRRGKAGQQGQDGERGPPGARGERGQPGATGQPGP 1038

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            +G  G +G        G PG  GL G  G PG PG  G PG  G DG+PG  G  G+ G 
Sbjct: 1039 KGDVGQDGS------PGVPGEKGLPGLQGPPGFPGSKGPPGPQGKDGVPGHPGQRGELGF 1092

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGI 255
             G  G  G  G+ GP+G  G SG 
Sbjct: 1093 QGQTGPPGPAGVLGPQGKIGDSGA 1116



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 86/200 (43%), Gaps = 51/200 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGP---KGD 165
            PG +G +GQ G  G  GE G+ G +G  G PG  GPPGPQ   G+PG  G+RG    +G 
Sbjct: 1036 PGPKGDVGQDGSPGVPGEKGLPGLQGPPGFPGSKGPPGPQGKDGVPGHPGQRGELGFQGQ 1095

Query: 166  MGYPGPQGIPGDEGKRGPKGDM---------------------------GYPGRIGLDGR 198
             G PGP G+ G +GK G  G                             G PG +G  G+
Sbjct: 1096 TGPPGPAGVLGPQGKIGDSGAPGERGHPGPPGPPGEHGLPGPEGGEGAKGEPGPLGPAGK 1155

Query: 199  DGLPGEPGL------------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            +G  G  GL                   G PG  G +G PG+ G  G  G  G  G +G 
Sbjct: 1156 EGPLGLRGLPGPKGAPGDPGPPGLKGDKGPPGPVGANGSPGEPGPLGPSGGIGLPGQSGG 1215

Query: 241  KGMTGPRGNRGKSGINGVPG 260
            +G  GP G +G  G  G PG
Sbjct: 1216 QGPVGPAGEKGAPGERGAPG 1235



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 92/243 (37%), Gaps = 78/243 (32%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-------- 147
            L  +QG         PPG QG  G  G  G +GE+G +G+ G  G  GV+GP        
Sbjct: 1056 LPGLQGPPGFPGSKGPPGPQGKDGVPGHPGQRGELGFQGQTGPPGPAGVLGPQGKIGDSG 1115

Query: 148  -------------------------------PGPQGIPGDEGKRGPKG------------ 164
                                           PGP G  G EG  G +G            
Sbjct: 1116 APGERGHPGPPGPPGEHGLPGPEGGEGAKGEPGPLGPAGKEGPLGLRGLPGPKGAPGDPG 1175

Query: 165  ------DMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPG 212
                  D G PGP    G PG+ G  GP G +G PG+ G  G  G  GE   PG  G PG
Sbjct: 1176 PPGLKGDKGPPGPVGANGSPGEPGPLGPSGGIGLPGQSGGQGPVGPAGEKGAPGERGAPG 1235

Query: 213  RNGMD---------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G D               G  G+DG  G+ G PG  G+ G+KG  GP G  G  G+ G
Sbjct: 1236 PTGKDGVPGPLGPQGPPGAAGPVGEDGDKGEVGHPGHKGSKGDKGDAGPPGPTGLRGLAG 1295

Query: 258  VPG 260
             PG
Sbjct: 1296 HPG 1298



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 74/163 (45%), Gaps = 45/163 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQG---------------I 153
            PG  GP+G  G IG  G+ G +G     GEKGAPG  G PGP G                
Sbjct: 1195 PGEPGPLGPSGGIGLPGQSGGQGPVGPAGEKGAPGERGAPGPTGKDGVPGPLGPQGPPGA 1254

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G  G+ G KG++G+PG       +G +G KGD G PG  GL G  G PG  G DG  GR
Sbjct: 1255 AGPVGEDGDKGEVGHPG------HKGSKGDKGDAGPPGPTGLRGLAGHPGPAGADGAQGR 1308

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
             G  G+ G+ G    DG+                  RG +G+N
Sbjct: 1309 RGPPGLFGQKG---DDGV------------------RGFTGVN 1330



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 79/181 (43%), Gaps = 42/181 (23%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGA---------------PGVVGPPGPQG----------- 152
            G +G  G +G +G  GE+G  G                PG  GP G +G           
Sbjct: 833  GAQGIPGPQGPIGTPGEKGPPGNPGIPGPPGADGPLGHPGPEGPTGEKGAQGPPGSAGPP 892

Query: 153  -------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---------GLD 196
                   + G  G RG +G+ G  G  G PG +G  GPKGD G PG           GL 
Sbjct: 893  GYPGPRGVKGTSGHRGLQGEKGETGVDGFPGFKGDMGPKGDWGQPGPPGARGEDGPEGLK 952

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G +GLPGE G  G  G  G  G+PG  G PG+ G  G+ G  G  G  G +G RGK+G  
Sbjct: 953  GPEGLPGEEGSPGAAGEKGNLGVPGLPGYPGRPGPKGSTGFPGALGPLGEKGRRGKAGQQ 1012

Query: 257  G 257
            G
Sbjct: 1013 G 1013



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 82/204 (40%), Gaps = 57/204 (27%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIG---QKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGP 150
            V   G      E   PGLQGP G    KG  G +G+ GV G   +RGE G  G  GPPGP
Sbjct: 1042 VGQDGSPGVPGEKGLPGLQGPPGFPGSKGPPGPQGKDGVPGHPGQRGELGFQGQTGPPGP 1101

Query: 151  QGIPGDEGKRGPKGDM---------------------------GYPGPQGIPGDEGKRGP 183
             G+ G +GK G  G                             G PGP G  G EG  G 
Sbjct: 1102 AGVLGPQGKIGDSGAPGERGHPGPPGPPGEHGLPGPEGGEGAKGEPGPLGPAGKEGPLGL 1161

Query: 184  KG------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            +G                  D G PG +G +G    PGEPG  G    +G  G+PG+ G 
Sbjct: 1162 RGLPGPKGAPGDPGPPGLKGDKGPPGPVGANGS---PGEPGPLGP---SGGIGLPGQSGG 1215

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGN 249
             G  G  G  G  GE+G  GP G 
Sbjct: 1216 QGPVGPAGEKGAPGERGAPGPTGK 1239



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 72/149 (48%), Gaps = 39/149 (26%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM------------GYPGRI 193
           GPPGP G+    G+ GP+G  GYPG   + G+ G+ GP+G              G  GR 
Sbjct: 665 GPPGPVGL---TGRPGPEGLPGYPG---LKGEAGEMGPQGPRGLQGPPGPPGREGKRGRS 718

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTN 235
           G DG  GLPG+ G  G  G +G+ G+PG                  +DG  G +G PG  
Sbjct: 719 GADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGPVGQPGPPGEDGGKGAEGPPGPT 778

Query: 236 GTNGE---KGMTGPRGNRGKSGINGVPGT 261
           G  GE   +G+ GPRG+ G  G  GV G+
Sbjct: 779 GQAGEPGPRGLIGPRGSPGPLGRPGVTGS 807



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 64/140 (45%), Gaps = 27/140 (19%)

Query: 146  GPPGP---QGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLD--- 196
            GPPGP    G PG+ G  GP G +G PG    QG  G  G++G  G+ G PG  G D   
Sbjct: 1184 GPPGPVGANGSPGEPGPLGPSGGIGLPGQSGGQGPVGPAGEKGAPGERGAPGPTGKDGVP 1243

Query: 197  ---------------GRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                           G DG  GE   PG  G  G  G  G PG  GL G  G PG  G +
Sbjct: 1244 GPLGPQGPPGAAGPVGEDGDKGEVGHPGHKGSKGDKGDAGPPGPTGLRGLAGHPGPAGAD 1303

Query: 239  GEKGMTGPRGNRGKSGINGV 258
            G +G  GP G  G+ G +GV
Sbjct: 1304 GAQGRRGPPGLFGQKGDDGV 1323



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 75/155 (48%), Gaps = 27/155 (17%)

Query: 106 TKEYCPPGLQGPIGQKGEIGAKGEMGVK---------------GERGEKGAPGVVGPPGP 150
           T    P GL G  G KGE G   EMG +               G+RG  GA G       
Sbjct: 673 TGRPGPEGLPGYPGLKGEAG---EMGPQGPRGLQGPPGPPGREGKRGRSGADGA------ 723

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           +G+PGD G   PKGD G+ G  G+PG++G+RG  G +G PG  G DG  G  G PG  G 
Sbjct: 724 RGLPGDTG---PKGDRGFDGLPGLPGEKGQRGDFGPVGQPGPPGEDGGKGAEGPPGPTGQ 780

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G  G  G+ G  G PG  G PG  G++G  G  G
Sbjct: 781 AGEPGPRGLIGPRGSPGPLGRPGVTGSDGAPGAKG 815



 Score = 40.0 bits (92), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 68/153 (44%), Gaps = 30/153 (19%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP------------GDEGKRGP 183
           +G  G  G+ G PGP+G+PG  G +G  G+MG   PQG              G  G+ G 
Sbjct: 664 KGPPGPVGLTGRPGPEGLPGYPGLKGEAGEMG---PQGPRGLQGPPGPPGREGKRGRSGA 720

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------------MDGIPGKDGLP---GK 228
            G  G PG  G  G  G  G PGL G  G+ G             DG  G +G P   G+
Sbjct: 721 DGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGPVGQPGPPGEDGGKGAEGPPGPTGQ 780

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG  G  G +G  GP G  G +G +G PG 
Sbjct: 781 AGEPGPRGLIGPRGSPGPLGRPGVTGSDGAPGA 813


>gi|157822195|ref|NP_001102145.1| collagen alpha-2(IX) chain precursor [Rattus norvegicus]
 gi|149023857|gb|EDL80354.1| procollagen, type IX, alpha 2 (predicted) [Rattus norvegicus]
          Length = 688

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 98/186 (52%), Gaps = 21/186 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +  M+G          PG QG  G  G+ G KG  G KGE G++G PG+ GPPG +G PG
Sbjct: 313 IPGMKGSAGQVGRPGSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGFPGISGPPGKEGEPG 372

Query: 156 DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G+ GP      KGD G  GP G PG +G++GPKG+ G P   G+ G  GLPG  G  G
Sbjct: 373 PRGETGPQGIMGEKGDQGERGPVGQPGPQGRQGPKGEQGSP---GIPGPQGLPGIKGDKG 429

Query: 210 IPGRN---------GMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG+          G+ G+P   G+ GL G+ G+ G  G  GE G  GP G+ G  G+ G
Sbjct: 430 SPGKTGPRGGVGDPGVAGLPGEKGEKGLSGEPGLKGQQGVRGEPGYPGPSGDAGAPGVQG 489

Query: 258 VPGTPA 263
            PG P 
Sbjct: 490 YPGLPG 495



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 90/158 (56%), Gaps = 15/158 (9%)

Query: 112 PGLQGPIGQKGEIGAKGE---MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+ GP G++GE G +GE    G+ GE+G++G  G VG PGPQG    +G +G +G  G 
Sbjct: 359 PGISGPPGKEGEPGPRGETGPQGIMGEKGDQGERGPVGQPGPQG---RQGPKGEQGSPGI 415

Query: 169 PGPQGIP------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           PGPQG+P      G  GK GP+G +G PG  GL G     GE GL G PG  G  G+ G+
Sbjct: 416 PGPQGLPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEK---GEKGLSGEPGLKGQQGVRGE 472

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG  G  G  G  G  G+ GPRG  G  G+ G PG
Sbjct: 473 PGYPGPSGDAGAPGVQGYPGLPGPRGLVGDRGVPGQPG 510



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/188 (40%), Positives = 92/188 (48%), Gaps = 48/188 (25%)

Query: 112 PGLQGPIGQKGEIGAKGE------------------MGVKGERGEKGAPGVVGPPGPQGI 153
           PG QG  G KG++GA GE                   G KGE G +G  G+VG  G  G 
Sbjct: 203 PGRQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGEMGPRGYKGMVGSIGAAGP 262

Query: 154 PGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP-- 205
           PG+EG RGP      KGD+G    QG  G +G  GPKG  G P   G+DG+DG PG P  
Sbjct: 263 PGEEGPRGPPGRAGEKGDVGS---QGARGPQGITGPKGTTGPP---GIDGKDGTPGIPGM 316

Query: 206 ----------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
                           GL G+PG+ G  G PG  G PG+ G PG +G  G++G  GPRG 
Sbjct: 317 KGSAGQVGRPGSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGFPGISGPPGKEGEPGPRGE 376

Query: 250 RGKSGING 257
            G  GI G
Sbjct: 377 TGPQGIMG 384



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 87/177 (49%), Gaps = 18/177 (10%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G   S     PPG +GP G  G  G KG++G +G R            GPQGI G +G 
Sbjct: 251 KGMVGSIGAAGPPGEEGPRGPPGRAGEKGDVGSQGAR------------GPQGITGPKGT 298

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGM 216
            GP G  G  G  GIPG +G     G +G PG  G  G  G+PG+PG  G P   G  G 
Sbjct: 299 TGPPGIDGKDGTPGIPGMKGS---AGQVGRPGSPGHQGLAGVPGQPGTKGGPGDKGEPGQ 355

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
            G PG  G PGK+G PG  G  G +G+ G +G++G+ G  G PG       K E  S
Sbjct: 356 QGFPGISGPPGKEGEPGPRGETGPQGIMGEKGDQGERGPVGQPGPQGRQGPKGEQGS 412



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 86/163 (52%), Gaps = 24/163 (14%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------- 147
             QGF   +    PPG +G  G +GE G +G MG KG++GE+G  G  GP          
Sbjct: 354 GQQGFPGIS---GPPGKEGEPGPRGETGPQGIMGEKGDQGERGPVGQPGPQGRQGPKGEQ 410

Query: 148 -----PGPQGIP------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                PGPQG+P      G  GK GP+G +G PG  G+PG++G++G  G+ G  G+ G+ 
Sbjct: 411 GSPGIPGPQGLPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGLSGEPGLKGQQGVR 470

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           G  G PG  G  G PG  G  G+PG  GL G  G+PG  G  G
Sbjct: 471 GEPGYPGPSGDAGAPGVQGYPGLPGPRGLVGDRGVPGQPGRQG 513



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 85/164 (51%), Gaps = 6/164 (3%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           QG         PPG+ G  G  G  G KG   ++G  G  G +G  GV G PG +G PGD
Sbjct: 290 QGITGPKGTTGPPGIDGKDGTPGIPGMKGSAGQVGRPGSPGHQGLAGVPGQPGTKGGPGD 349

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
           +G+    G  G+PG  G PG EG+ GP+G+ G  G +G  G  G  G  G  G  GR G 
Sbjct: 350 KGE---PGQQGFPGISGPPGKEGEPGPRGETGPQGIMGEKGDQGERGPVGQPGPQGRQGP 406

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G+PG  G+PG  G  G  G TGPRG  G  G+ G+PG
Sbjct: 407 KGEQGSPGIPGPQGLPGIKGDKGSPGKTGPRGGVGDPGVAGLPG 450



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 81/175 (46%), Gaps = 31/175 (17%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG------------P 171
            G KG  G++G +G  G  G++G       PG +GK GPKGD+G  G             
Sbjct: 179 AGVKGPQGLQGVKGHPGKRGILG------DPGRQGKPGPKGDVGASGEQGIPGPPGPQGI 232

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G PG  G +G  G  GY G +G  G  G PGE G  G PGR             G+ G 
Sbjct: 233 RGYPGMAGPKGEMGPRGYKGMVGSIGAAGPPGEEGPRGPPGRA------------GEKGD 280

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL-LPNSETSQLLI 285
            G+ G  G +G+TGP+G  G  GI+G  GTP I   K  +  +  P S   Q L 
Sbjct: 281 VGSQGARGPQGITGPKGTTGPPGIDGKDGTPGIPGMKGSAGQVGRPGSPGHQGLA 335


>gi|198416097|ref|XP_002120982.1| PREDICTED: similar to collagen, type IV, alpha 1 [Ciona intestinalis]
          Length = 1831

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 109/219 (49%), Gaps = 56/219 (25%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEI----------GAKGEMGVKGERGEKGAPGVVGP 147
             + G   S  E   PG +GP+GQKGE           G KGE G KGE G  G  G+ G 
Sbjct: 1032 GLPGAEGSPGEDGAPGFRGPLGQKGEPAEVAAHLLQPGEKGEQGDKGETGPAGLAGLYGY 1091

Query: 148  P---GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM----------------- 187
            P   G QG+ G++G RGP+G  G  G  G  G++G  G  GD+                 
Sbjct: 1092 PGKKGEQGLVGEKGARGPRGLTGLDGLPGTQGEQGTPGSPGDLGLPGPEGPPGPQGEQGT 1151

Query: 188  -------GYPGRIGLDG-RDGLPGEPGLDGIPGRNGMD---GIPGKD---GLPGKDGIPG 233
                   GYPG  G  G +  LPG PG+DG+PG++G+D   G+PGKD   GLPG++G+PG
Sbjct: 1152 IGLPGSRGYPGLPGQKGAKSTLPGLPGVDGLPGKDGLDGEPGMPGKDGQVGLPGRNGLPG 1211

Query: 234  TNGT------------NGEKGMTGPRGNRGKSGINGVPG 260
              G             +GEKG TGP G RG  G  G+PG
Sbjct: 1212 PKGGRGNSGLMGFPGESGEKGNTGPAGERGFPGQQGLPG 1250



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/193 (42%), Positives = 100/193 (51%), Gaps = 22/193 (11%)

Query: 90  AYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG-----V 144
           A SR+ +   QG   +T     PG  G  G+KGE G +G  G  G +GEKG+ G     V
Sbjct: 750 ARSRV-IPGEQGEVGNTGLPGTPGRPGEAGEKGEDGLQGYPGFAGRKGEKGSQGPAGRSV 808

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD--MGYPGRIGLDGRDGLP 202
            G PG  GIPG+ G+ G KG  G PG  G+PG +G  G KG    GYPG  G  G  G P
Sbjct: 809 RGEPGAVGIPGETGQPGKKGSAGRPGFDGMPGLDGLPGEKGKDAFGYPGPRGTQGSRGSP 868

Query: 203 GEPGL---DGIPGRNGM------DGIPGKDGLPGKDGIPGTNGTNGEKGMT-----GPRG 248
           G PG+    G PG  G       DG  GKDG PG DG+ G  G  GE G       GP G
Sbjct: 869 GAPGVIGEQGPPGPAGRRGPAGPDGEDGKDGQPGFDGLTGRPGQKGEPGSARLGPIGPAG 928

Query: 249 NRGKSGINGVPGT 261
            +G++G+ G PG+
Sbjct: 929 PQGETGLPGYPGS 941



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 91/165 (55%), Gaps = 7/165 (4%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            G  G+ G+ GE G  G  G VG PG  G+PG +G RG  G MG+PG  G   ++G  GP 
Sbjct: 1181 GLPGKDGLDGEPGMPGKDGQVGLPGRNGLPGPKGGRGNSGLMGFPGESG---EKGNTGPA 1237

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G+ G+PG+ GL G  GL G PG+ G  GR G+ G  G DGLPG+ G+PG +   G  G+ 
Sbjct: 1238 GERGFPGQQGLPGIGGLEGLPGVQGEKGRTGLPGRQGLDGLPGEAGLPGDS-VPGPVGLP 1296

Query: 245  GPRGNRGKSGINGVPGTP---AICAYKRESCSLLPNSETSQLLIP 286
            G +G  G+ G+ G+PG P    +   K E   L P   + +   P
Sbjct: 1297 GRQGLPGEEGMIGLPGLPGPRGLPGLKGEMGFLGPEGPSGRQGQP 1341



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 111/270 (41%), Gaps = 85/270 (31%)

Query: 74   KEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK 133
            K +Q S  +  +  L   +  P     G         PPG +GP G +G  G  G MG  
Sbjct: 959  KGEQGSPGSEGYPGLQGVTGSP--GRTGLPGLDGSAGPPGKEGPTGPQGLQGRSGPMGFP 1016

Query: 134  GERGEKGAPGVVGP---PGPQGIPGDEGK---RGPKGDMGYP------------------ 169
            G +GE G PG+ G    PG +G PG++G    RGP G  G P                  
Sbjct: 1017 GRKGEPGNPGLPGSDGLPGAEGSPGEDGAPGFRGPLGQKGEPAEVAAHLLQPGEKGEQGD 1076

Query: 170  -------------------GPQGIPGDEGKRGPK------------GDMGYPGR------ 192
                               G QG+ G++G RGP+            G+ G PG       
Sbjct: 1077 KGETGPAGLAGLYGYPGKKGEQGLVGEKGARGPRGLTGLDGLPGTQGEQGTPGSPGDLGL 1136

Query: 193  ---------------IGLDGRDGLPGEPGLDG----IPGRNGMDGIPGKDGLPGKDGIPG 233
                           IGL G  G PG PG  G    +PG  G+DG+PGKDGL G+ G+PG
Sbjct: 1137 PGPEGPPGPQGEQGTIGLPGSRGYPGLPGQKGAKSTLPGLPGVDGLPGKDGLDGEPGMPG 1196

Query: 234  TNGT---NGEKGMTGPRGNRGKSGINGVPG 260
             +G     G  G+ GP+G RG SG+ G PG
Sbjct: 1197 KDGQVGLPGRNGLPGPKGGRGNSGLMGFPG 1226



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 79/144 (54%), Gaps = 16/144 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PGL G  G++GE G  G  G  GE G +G PG+ GPPG +G  G  G RG          
Sbjct: 1415 PGLAGFAGEQGEPGFPGMKGRPGEPGAQGLPGLEGPPGEKGERGTTGLRGEDAQPIFREG 1474

Query: 163  -KGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             KG+ G PGP   +G PG  G++G  G  G  G IG   ++G+PG PGL G  G  G  G
Sbjct: 1475 EKGESGSPGPVGPRGFPGQVGRQGTPGTRGQKGEIG---QEGIPGLPGLAGDRGEPGPQG 1531

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKG 242
            + G  GLPG+DG+PG NG  G  G
Sbjct: 1532 LVGAQGLPGEDGLPGANGLPGTPG 1555



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/181 (41%), Positives = 92/181 (50%), Gaps = 25/181 (13%)

Query: 111  PPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGV-----VGPPGPQG---IPGDEGK 159
            P G +GP G  GE G  G+ G   + G  G+KG PG      +GP GPQG   +PG  G 
Sbjct: 882  PAGRRGPAGPDGEDGKDGQPGFDGLTGRPGQKGEPGSARLGPIGPAGPQGETGLPGYPGS 941

Query: 160  RGPKGDMGYPG--------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG-- 209
            +G  G+ G PG         QG PG EG  G +G  G PGR GL G DG  G PG +G  
Sbjct: 942  QGEPGEPGLPGTDIVGMKGEQGSPGSEGYPGLQGVTGSPGRTGLPGLDGSAGPPGKEGPT 1001

Query: 210  ----IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                + GR+G  G PG+ G PG  G+PG++G  G +G  G  G  G  G  G  G PA  
Sbjct: 1002 GPQGLQGRSGPMGFPGRKGEPGNPGLPGSDGLPGAEGSPGEDGAPGFRGPLGQKGEPAEV 1061

Query: 266  A 266
            A
Sbjct: 1062 A 1062



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 85/193 (44%), Gaps = 32/193 (16%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              + G+  S  E   PGL G       +G KGE G  G  G  G  GV G PG  G+PG 
Sbjct: 933  TGLPGYPGSQGEPGEPGLPG----TDIVGMKGEQGSPGSEGYPGLQGVTGSPGRTGLPGL 988

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIP-- 211
            +G  GP G  G  GPQG+ G  G  G  G  G PG  GL G DGLP   G PG DG P  
Sbjct: 989  DGSAGPPGKEGPTGPQGLQGRSGPMGFPGRKGEPGNPGLPGSDGLPGAEGSPGEDGAPGF 1048

Query: 212  -----------------------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
                                   G  G  G  G  GL G  G PG  G  G  G  G RG
Sbjct: 1049 RGPLGQKGEPAEVAAHLLQPGEKGEQGDKGETGPAGLAGLYGYPGKKGEQGLVGEKGARG 1108

Query: 249  NRGKSGINGVPGT 261
             RG +G++G+PGT
Sbjct: 1109 PRGLTGLDGLPGT 1121



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 92/183 (50%), Gaps = 38/183 (20%)

Query: 112  PGLQGPIGQKGE--IGAKGEMGVKGERGEKGAPGVVG---PPGPQG-------------- 152
            PGL G  G+KG+   G  G  G +G RG  GAPGV+G   PPGP G              
Sbjct: 839  PGLDGLPGEKGKDAFGYPGPRGTQGSRGSPGAPGVIGEQGPPGPAGRRGPAGPDGEDGKD 898

Query: 153  -IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLP------ 202
              PG +G  G  G  G PG   + G  G  GP+G+    GYPG  G  G  GLP      
Sbjct: 899  GQPGFDGLTGRPGQKGEPGSARL-GPIGPAGPQGETGLPGYPGSQGEPGEPGLPGTDIVG 957

Query: 203  -----GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                 G PG +G PG  G+ G PG+ GLPG D   G+ G  G++G TGP+G +G+SG  G
Sbjct: 958  MKGEQGSPGSEGYPGLQGVTGSPGRTGLPGLD---GSAGPPGKEGPTGPQGLQGRSGPMG 1014

Query: 258  VPG 260
             PG
Sbjct: 1015 FPG 1017



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 78/150 (52%), Gaps = 17/150 (11%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L  + GF     E   PG++G  G+ G  G  G  G  GE+GE+G  G+ G         
Sbjct: 1414 LPGLAGFAGEQGEPGFPGMKGRPGEPGAQGLPGLEGPPGEKGERGTTGLRGE-------- 1465

Query: 156  D------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            D      EG++G  G  G  GP+G PG  G++G  G  G  G IG +G  GLPG  G  G
Sbjct: 1466 DAQPIFREGEKGESGSPGPVGPRGFPGQVGRQGTPGTRGQKGEIGQEGIPGLPGLAGDRG 1525

Query: 210  IPGRNGM---DGIPGKDGLPGKDGIPGTNG 236
             PG  G+    G+PG+DGLPG +G+PGT G
Sbjct: 1526 EPGPQGLVGAQGLPGEDGLPGANGLPGTPG 1555



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 82/168 (48%), Gaps = 22/168 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGY 168
            PG +G  G  G  G  G  G  GE+GE G PG+    G PG QG+PG EG  G KG+ G 
Sbjct: 1400 PGAKGQTGLPGSTGLPGLAGFAGEQGEPGFPGMKGRPGEPGAQGLPGLEGPPGEKGERGT 1459

Query: 169  PG----------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             G           +G  G+ G  GP G  G+PG++G  G       PG  G  G  G +G
Sbjct: 1460 TGLRGEDAQPIFREGEKGESGSPGPVGPRGFPGQVGRQGT------PGTRGQKGEIGQEG 1513

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            IPG  GL G  G PG  G  G +G+    G  G  G NG+PGTP   A
Sbjct: 1514 IPGLPGLAGDRGEPGPQGLVGAQGLP---GEDGLPGANGLPGTPGPSA 1558



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 90/207 (43%), Gaps = 37/207 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G  G  GA G  G+ GERG KG+ G +G PGP G+ G+ G  G  G  G  G 
Sbjct: 657 PGFVGPAGLPGRSGAPGRDGLNGERGAKGSKGEIGFPGPLGLSGETGNPGIPGAPGRDG- 715

Query: 172 QGIPGDEGKRGPKGDMG----------------------YPGRIGLDGRDGLPGEPGLDG 209
           Q +PG+ G+ G KGD G                       PG  G  G  GLPG PG  G
Sbjct: 716 QDLPGETGEPGAKGDRGNSGGLGFPGPPGQKGEPARSRVIPGEQGEVGNTGLPGTPGRPG 775

Query: 210 IPGRNGMDGIPGKDGLPGKDGI--------------PGTNGTNGEKGMTGPRGNRGKSGI 255
             G  G DG+ G  G  G+ G               PG  G  GE G  G +G+ G+ G 
Sbjct: 776 EAGEKGEDGLQGYPGFAGRKGEKGSQGPAGRSVRGEPGAVGIPGETGQPGKKGSAGRPGF 835

Query: 256 NGVPGTPAICAYKRESCSLLPNSETSQ 282
           +G+PG   +   K +     P    +Q
Sbjct: 836 DGMPGLDGLPGEKGKDAFGYPGPRGTQ 862



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 91/193 (47%), Gaps = 42/193 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG-----APGVVGPPGPQGIPGDEGK------RG 161
            GL G  G+KG  G  G  G+ G  GE G      PG VG PG QG+PG+EG        G
Sbjct: 1256 GLPGVQGEKGRTGLPGRQGLDGLPGEAGLPGDSVPGPVGLPGRQGLPGEEGMIGLPGLPG 1315

Query: 162  P------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE----------- 204
            P      KG+MG+ GP+G  G +G+ GP+G     G IG  G  G  GE           
Sbjct: 1316 PRGLPGLKGEMGFLGPEGPSGRQGQPGPRGAT-VKGEIGATGPSGPAGESGPTGPPGLPG 1374

Query: 205  ----------PGLDGIPGRNGMDGIPG---KDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                      PG  G PG NG +G PG   + GLPG  G+PG  G  GE+G  G  G +G
Sbjct: 1375 LPGLLGKKGEPGPTGEPGFNGFEGKPGAKGQTGLPGSTGLPGLAGFAGEQGEPGFPGMKG 1434

Query: 252  KSGINGVPGTPAI 264
            + G  G  G P +
Sbjct: 1435 RPGEPGAQGLPGL 1447



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 88/198 (44%), Gaps = 41/198 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGPQ 151
            G +GP G++G+ G +G   VKGE G  G  G  G                      PGP 
Sbjct: 1330 GPEGPSGRQGQPGPRGAT-VKGEIGATGPSGPAGESGPTGPPGLPGLPGLLGKKGEPGPT 1388

Query: 152  GIPGD---EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G PG    EGK G KG  G PG  G+PG  G  G +G+ G+PG  G  G  G  G PGL+
Sbjct: 1389 GEPGFNGFEGKPGAKGQTGLPGSTGLPGLAGFAGEQGEPGFPGMKGRPGEPGAQGLPGLE 1448

Query: 209  GIPGRNG----------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G PG  G                 +G  G+ G PG  G  G  G  G +G  G RG +G+
Sbjct: 1449 GPPGEKGERGTTGLRGEDAQPIFREGEKGESGSPGPVGPRGFPGQVGRQGTPGTRGQKGE 1508

Query: 253  SGINGVPGTPAICAYKRE 270
             G  G+PG P +   + E
Sbjct: 1509 IGQEGIPGLPGLAGDRGE 1526



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 94/244 (38%), Gaps = 65/244 (26%)

Query: 92   SRIPLVAMQGFCNSTKEYCPPG--LQGPIGQKGEIGAKGE---MGVKGERGEKGAPGV-- 144
             R  L   QG      E   PG  + GP+G  G  G  GE   +G+ G  G +G PG+  
Sbjct: 1265 GRTGLPGRQGLDGLPGEAGLPGDSVPGPVGLPGRQGLPGEEGMIGLPGLPGPRGLPGLKG 1324

Query: 145  ----VGPPGPQGIPGDEGKRGP--KGDMGY------------------------------ 168
                +GP GP G  G  G RG   KG++G                               
Sbjct: 1325 EMGFLGPEGPSGRQGQPGPRGATVKGEIGATGPSGPAGESGPTGPPGLPGLPGLLGKKGE 1384

Query: 169  PGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            PGP G P   G EGK G KG  G PG  GL G  G  GE G  G PG  G  G PG  GL
Sbjct: 1385 PGPTGEPGFNGFEGKPGAKGQTGLPGSTGLPGLAGFAGEQGEPGFPGMKGRPGEPGAQGL 1444

Query: 226  PGKDGIPGT-------------------NGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            PG +G PG                     G  GE G  GP G RG  G  G  GTP    
Sbjct: 1445 PGLEGPPGEKGERGTTGLRGEDAQPIFREGEKGESGSPGPVGPRGFPGQVGRQGTPGTRG 1504

Query: 267  YKRE 270
             K E
Sbjct: 1505 QKGE 1508



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 73/153 (47%), Gaps = 28/153 (18%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            L+   G         P G +G  GQ+G  G  G  G+ G +GEKG  G+   PG QG+  
Sbjct: 1221 LMGFPGESGEKGNTGPAGERGFPGQQGLPGIGGLEGLPGVQGEKGRTGL---PGRQGL-- 1275

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
                       G PG  G+PGD            PG +GL GR GLPGE G+ G+PG  G
Sbjct: 1276 ----------DGLPGEAGLPGDS----------VPGPVGLPGRQGLPGEEGMIGLPGLPG 1315

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
              G+P   GL G+ G  G  G +G +G  GPRG
Sbjct: 1316 PRGLP---GLKGEMGFLGPEGPSGRQGQPGPRG 1345



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 93/219 (42%), Gaps = 71/219 (32%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEK---------------GAPGVVGPPGPQ--- 151
           CP    GP G  GE G  G  G+ GE G                 G PG +G  GP+   
Sbjct: 577 CP---AGPKGSTGEAGNPGTPGIPGEMGSHGAKGGKGQKGFAGFPGLPGQLGNDGPEGEI 633

Query: 152 GIPGDEGK---------RGPKGDMGYPGPQGIP------------GDEGKRGPKGDMGYP 190
           G PG +G+         +G KG  G+ GP G+P            G+ G +G KG++G+P
Sbjct: 634 GPPGAKGEVGELNIIRVKGDKGSPGFVGPAGLPGRSGAPGRDGLNGERGAKGSKGEIGFP 693

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG----------- 239
           G +GL G     G PG+ G PGR+G D       LPG+ G PG  G  G           
Sbjct: 694 GPLGLSGET---GNPGIPGAPGRDGQD-------LPGETGEPGAKGDRGNSGGLGFPGPP 743

Query: 240 -EKG-------MTGPRGNRGKSGINGVPGTPAICAYKRE 270
            +KG       + G +G  G +G+ G PG P     K E
Sbjct: 744 GQKGEPARSRVIPGEQGEVGNTGLPGTPGRPGEAGEKGE 782



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 48/85 (56%)

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           GR G+ G  G  G  G+ G PG  G+ GIPG+ G PG +G+PG NGT GE G+ GP G  
Sbjct: 97  GREGMQGPKGSRGSQGVHGYPGNPGIPGIPGQTGAPGPEGLPGCNGTKGELGLVGPPGLD 156

Query: 251 GKSGINGVPGTPAICAYKRESCSLL 275
           G SG  G  G+  +     E  +++
Sbjct: 157 GFSGRPGPAGSKGMKGQPGEVINMV 181



 Score = 45.8 bits (107), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 90/221 (40%), Gaps = 74/221 (33%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGV----------------------------- 144
           ++GP GQ G  G+ G  G+ G  G KG+PG                              
Sbjct: 495 VEGPPGQDGRPGSNGRPGLPGPTGPKGSPGTDAVITHEIMEEMVTPGPPGQPGSPGPPGR 554

Query: 145 VGPPGPQGIPGDEGKRGPKGD---------------MGYPGPQGIPGDEGKRGPKGDM-- 187
           VG PG    PG  G  GPKG+                G PG  GIPG+ G  G KG    
Sbjct: 555 VGSPG---FPGRSGAAGPKGEECGLCPAGPKGSTGEAGNPGTPGIPGEMGSHGAKGGKGQ 611

Query: 188 -------GYPGRIGLDGRDGLPGEPGLDG---------------IPGRNGMDGIPGKDGL 225
                  G PG++G DG +G  G PG  G                PG  G  G+PG+ G 
Sbjct: 612 KGFAGFPGLPGQLGNDGPEGEIGPPGAKGEVGELNIIRVKGDKGSPGFVGPAGLPGRSGA 671

Query: 226 PGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG+DG+    G  G+ GE G  GP G  G++G  G+PG P 
Sbjct: 672 PGRDGLNGERGAKGSKGEIGFPGPLGLSGETGNPGIPGAPG 712



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 42/74 (56%)

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G+ G +G RG +G  GYPG  G+ G  G  G PG +G+PG NG  G  G  G PG DG 
Sbjct: 99  EGMQGPKGSRGSQGVHGYPGNPGIPGIPGQTGAPGPEGLPGCNGTKGELGLVGPPGLDGF 158

Query: 232 PGTNGTNGEKGMTG 245
            G  G  G KGM G
Sbjct: 159 SGRPGPAGSKGMKG 172


>gi|410906639|ref|XP_003966799.1| PREDICTED: collagen alpha-2(V) chain-like [Takifugu rubripes]
          Length = 1445

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 90/178 (50%), Gaps = 36/178 (20%)

Query: 113 GLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------ 160
           G+ GP G KG+ G      +KGE G+KGERG+ GAPG +GP G      DEGKR      
Sbjct: 397 GMTGPHGAKGQAGGVGVPGSKGETGLKGERGDHGAPGSLGPKG------DEGKRGMRGDA 450

Query: 161 ------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                 GP G+ G PG +G PG +G  GPKG  G  G  G  G  GL G+PG DG PG  
Sbjct: 451 GTTGPPGPSGETGVPGNRGFPGSDGLLGPKGGHGERGPPGSTGPKGLSGDPGRDGEPGLT 510

Query: 215 GMDGIPGKDGLPGKDGIPGTNG------------TNGEKGMTGPRGNRGKSGINGVPG 260
           G  G+ G  G  G +G PG  G            + G +G +GP G  G  G+ G PG
Sbjct: 511 GARGLSGPIGAQGAEGKPGPMGSAGDDGKPGPGGSTGSRGASGPMGLPGPKGLTGDPG 568



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 86/163 (52%), Gaps = 9/163 (5%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           +G +GE+G +G  G  G PG  G PG+ GK G +G  G  GP G  G  G+RGP G+ G 
Sbjct: 603 VGTRGEQGPQGFNGFQGLPGLSGAPGESGKPGSEGLPGEVGPGGATGPRGERGPPGERGE 662

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMD------GIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G  GL G  G PG PG DG+ G+ G+       G+PG  G+PG+ G PGT+G  G  G 
Sbjct: 663 SGPSGLLGPKGSPGAPGPDGLKGKAGLAGSVGEPGVPGLQGMPGERGTPGTSGPKGNTGS 722

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
            G +G  GK+G +GV G P          S  PN E  +   P
Sbjct: 723 VGEKGPEGKAGADGVRGLPGALG---PVGSAGPNGEKGETGPP 762



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/191 (40%), Positives = 90/191 (47%), Gaps = 33/191 (17%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQG---------IPG 155
           E  PPG  GP G  G+ G  GE G+ G RG  G   A G  G PGP G           G
Sbjct: 485 ERGPPGSTGPKGLSGDPGRDGEPGLTGARGLSGPIGAQGAEGKPGPMGSAGDDGKPGPGG 544

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------G 200
             G RG  G MG PGP+G+ GD GK G  G +G PG+ G++G+D               G
Sbjct: 545 STGSRGASGPMGLPGPKGLTGDPGKTGEAGSLGPPGQRGVNGKDGEEGAAGPPGPAGPVG 604

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGING 257
             GE G  G    NG  G+PG  G PG+ G PG+ G  GE    G TGPRG RG  G  G
Sbjct: 605 TRGEQGPQGF---NGFQGLPGLSGAPGESGKPGSEGLPGEVGPGGATGPRGERGPPGERG 661

Query: 258 VPGTPAICAYK 268
             G   +   K
Sbjct: 662 ESGPSGLLGPK 672



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 88/181 (48%), Gaps = 23/181 (12%)

Query: 87  WLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG 146
             N +  +P   + G    + +    GL G +G  G  G +GE G  GERGE G  G++G
Sbjct: 613 GFNGFQGLP--GLSGAPGESGKPGSEGLPGEVGPGGATGPRGERGPPGERGESGPSGLLG 670

Query: 147 P------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           P      PGP G+ G  G  G  G+ G PG QG+PG+ G  G  G  G  G +G  G + 
Sbjct: 671 PKGSPGAPGPDGLKGKAGLAGSVGEPGVPGLQGMPGERGTPGTSGPKGNTGSVGEKGPE- 729

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      G+ G DG+    GLPG  G  G+ G NGEKG TGP G  G+ G  G PG
Sbjct: 730 -----------GKAGADGV---RGLPGALGPVGSAGPNGEKGETGPPGPTGRRGSRGSPG 775

Query: 261 T 261
           +
Sbjct: 776 S 776



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 92/168 (54%), Gaps = 18/168 (10%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---------QGIPGDEG 158
           E  P G++G  G++G  G  G +G  G  G++G  GV+GP G          QG+ G  G
Sbjct: 344 EAGPTGVRGAPGRQGNRGDAGPVGSTGPAGKQGIAGVIGPAGIIGPSGPPGPQGMTGPHG 403

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNG 215
            +G  G +G PG +G   + G +G +GD G PG +G    +G+ G+ G+ G  G PG +G
Sbjct: 404 AKGQAGGVGVPGSKG---ETGLKGERGDHGAPGSLGPKGDEGKRGMRGDAGTTGPPGPSG 460

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPG 260
             G+PG  G PG DG+ G  G +GE+   G TGP+G  G  G +G PG
Sbjct: 461 ETGVPGNRGFPGSDGLLGPKGGHGERGPPGSTGPKGLSGDPGRDGEPG 508



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP------------GVVGPPGPQGIPGDEG 158
           P G  GP G+KGE G  G  G +G RG  G+             G  GP G  GI G+ G
Sbjct: 746 PVGSAGPNGEKGETGPPGPTGRRGSRGSPGSTGGVGPAGPAGFHGTSGPEGQPGIKGETG 805

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           + G KG+ G PGPQG  G  G +GP G  G  G  G  G+ G PG PGL G  G  G  G
Sbjct: 806 QPGQKGEAGSPGPQGTAGKTGAQGPFGVTGMKGGRGSQGQAGAPGFPGLPGGIGPVGSAG 865

Query: 219 IPGKD---GLPGKDGIPGTNGTNGEKGMTGPR 247
             G D   G PGK G PG  G  G  G  G R
Sbjct: 866 AAGPDGPIGEPGKQGPPGIQGEAGAVGHQGER 897



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 86/193 (44%), Gaps = 36/193 (18%)

Query: 108 EYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           E  P GL GP G  G  G    KG+ G+ G  GE G PG+ G PG +G PG  G +G  G
Sbjct: 662 ESGPSGLLGPKGSPGAPGPDGLKGKAGLAGSVGEPGVPGLQGMPGERGTPGTSGPKGNTG 721

Query: 165 DMGYPGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGRDGLPGEPG------ 206
            +G  GP+G  G +G R            GP G+ G  G  G  GR G  G PG      
Sbjct: 722 SVGEKGPEGKAGADGVRGLPGALGPVGSAGPNGEKGETGPPGPTGRRGSRGSPGSTGGVG 781

Query: 207 ------LDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGP------RGNRG 251
                   G  G  G  GI G+ G PG+    G PG  GT G+ G  GP      +G RG
Sbjct: 782 PAGPAGFHGTSGPEGQPGIKGETGQPGQKGEAGSPGPQGTAGKTGAQGPFGVTGMKGGRG 841

Query: 252 KSGINGVPGTPAI 264
             G  G PG P +
Sbjct: 842 SQGQAGAPGFPGL 854



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 80/155 (51%), Gaps = 27/155 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +GP G+ G +G +G+ G  G  G  GA G  GP GP G+ G  G++G  G+ G  G  
Sbjct: 994  GAEGPPGRDGLVGQRGDRGDSGPEGLAGAAGSTGPEGPVGLTGSHGEQGNNGERGPIGLT 1053

Query: 173  GIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---- 225
            G PG  GK   +GP+GD G PG+ G+ G+ G  G  GL G+PG  G +G PG  G+    
Sbjct: 1054 GAPGVRGKVGPQGPQGDKGAPGKQGVQGQKGHRGFTGLHGLPGTTGANGEPGAKGVVGPP 1113

Query: 226  -----------PGKD---------GIPGTNGTNGE 240
                       PGK+         G PGT G++G+
Sbjct: 1114 GPRGAPGVVGPPGKEGNMGHPGPMGAPGTRGSSGD 1148



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/156 (41%), Positives = 81/156 (51%), Gaps = 6/156 (3%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E   PG  GP G  G +G KG  G  G  G +G PG +GP G  G  G++G+ GP G  G
Sbjct: 707 ERGTPGTSGPKGNTGSVGEKGPEGKAGADGVRGLPGALGPVGSAGPNGEKGETGPPGPTG 766

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G +G PG  G  GP G  G+ G  G +G+ G+ GE    G PG+ G  G PG  G  G
Sbjct: 767 RRGSRGSPGSTGGVGPAGPAGFHGTSGPEGQPGIKGE---TGQPGQKGEAGSPGPQGTAG 823

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           K G  G  G     GM G RG++G++G  G PG P 
Sbjct: 824 KTGAQGPFGVT---GMKGGRGSQGQAGAPGFPGLPG 856



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 81/160 (50%), Gaps = 18/160 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEK------GAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            G QG  G +G  G  G +G +G+RG+       GA G  GP GP G+ G  G++G  G+ 
Sbjct: 988  GTQGTAGAEGPPGRDGLVGQRGDRGDSGPEGLAGAAGSTGPEGPVGLTGSHGEQGNNGER 1047

Query: 167  GYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            G  G  G PG  GK   +GP+GD G PG+ G+ G+ G  G  GL G+PG  G +G PG  
Sbjct: 1048 GPIGLTGAPGVRGKVGPQGPQGDKGAPGKQGVQGQKGHRGFTGLHGLPGTTGANGEPGAK 1107

Query: 224  GLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSG 254
            G+ G           G PG  G  G  G  G  G RG SG
Sbjct: 1108 GVVGPPGPRGAPGVVGPPGKEGNMGHPGPMGAPGTRGSSG 1147



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 70/136 (51%), Gaps = 6/136 (4%)

Query: 132  VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
            + G++G +G  G  G  G +G PG +G  G +GD G  GP+G+ G  G  GP+G +G  G
Sbjct: 977  LPGDKGSQGDAGTQGTAGAEGPPGRDGLVGQRGDRGDSGPEGLAGAAGSTGPEGPVGLTG 1036

Query: 192  RIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
              G  G +G  G  GL G P   G+ G  G  G  G PGK G+    G  G +G TG  G
Sbjct: 1037 SHGEQGNNGERGPIGLTGAPGVRGKVGPQGPQGDKGAPGKQGV---QGQKGHRGFTGLHG 1093

Query: 249  NRGKSGINGVPGTPAI 264
              G +G NG PG   +
Sbjct: 1094 LPGTTGANGEPGAKGV 1109



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 87/183 (47%), Gaps = 33/183 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL+G  G  G  G++GE G  G +G  G  GV+G PGP+G  G +G+RG       PGP
Sbjct: 252 PGLKGQKGFAGLAGSRGESGATGAKGASGTSGVLGAPGPEGPAGLQGERG------RPGP 305

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGL------------DGRDGLPGEPGLDGIPGRNG--MD 217
               G  GK+G  G +G PG +G              G  G  G  G+ G PGR G   D
Sbjct: 306 S---GPLGKQGESGHVGKPGPVGTIGIPGMPGFPGGPGLKGEAGPTGVRGAPGRQGNRGD 362

Query: 218 GIP-GKDGLPGKDGIPGTNG---------TNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             P G  G  GK GI G  G           G +GMTGP G +G++G  GVPG+      
Sbjct: 363 AGPVGSTGPAGKQGIAGVIGPAGIIGPSGPPGPQGMTGPHGAKGQAGGVGVPGSKGETGL 422

Query: 268 KRE 270
           K E
Sbjct: 423 KGE 425



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 64/124 (51%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G +G  G +G  G+ G PG +G PG +G  G  GK GP G  G+PG  G PG +G++G  
Sbjct: 202 GYRGPSGGQGIPGDAGDPGQMGEPGQRGPDGFPGKPGPDGSRGFPGLPGHPGLKGQKGFA 261

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G  G  G  G  G  G  G+ G PG  G  G+ G+ G PG  G  G  G +G  G  
Sbjct: 262 GLAGSRGESGATGAKGASGTSGVLGAPGPEGPAGLQGERGRPGPSGPLGKQGESGHVGKP 321

Query: 245 GPRG 248
           GP G
Sbjct: 322 GPVG 325



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 71/176 (40%), Gaps = 38/176 (21%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGD------------------------------------- 156
           G RG KG  G  GPPG  G PG                                      
Sbjct: 140 GPRGFKGRRGFQGPPGLDGEPGIPGNPGQPGPPGHPGPPGGNLVSQMTSGLNEKSSMASM 199

Query: 157 -EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G RGP G  G PG  G PG  G+ G +G  G+PG+ G DG  G PG PG  G+ G+ G
Sbjct: 200 VSGYRGPSGGQGIPGDAGDPGQMGEPGQRGPDGFPGKPGPDGSRGFPGLPGHPGLKGQKG 259

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             G+ G  G  G  G  G +GT+G  G  GP G  G  G  G PG       + ES
Sbjct: 260 FAGLAGSRGESGATGAKGASGTSGVLGAPGPEGPAGLQGERGRPGPSGPLGKQGES 315



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 64/128 (50%), Gaps = 6/128 (4%)

Query: 113 GLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GP G +G   + G  G+MG  G+RG  G PG  GP G +G PG  G  G KG  G+ 
Sbjct: 202 GYRGPSGGQGIPGDAGDPGQMGEPGQRGPDGFPGKPGPDGSRGFPGLPGHPGLKGQKGFA 261

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G  G+ G  G KG  G  G +G  G +   G  GL G  GR G  G  GK G  G  
Sbjct: 262 GLAGSRGESGATGAKGASGTSGVLGAPGPE---GPAGLQGERGRPGPSGPLGKQGESGHV 318

Query: 230 GIPGTNGT 237
           G PG  GT
Sbjct: 319 GKPGPVGT 326



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G   ST    P GL G  G++G  G +G +G+ G  G +G  G  GP G +G PG +
Sbjct: 1018 GLAGAAGSTGPEGPVGLTGSHGEQGNNGERGPIGLTGAPGVRGKVGPQGPQGDKGAPGKQ 1077

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLD 208
            G +G KG  G+ G  G+PG  G  G  G  G          PG +G  G++G  G PG  
Sbjct: 1078 GVQGQKGHRGFTGLHGLPGTTGANGEPGAKGVVGPPGPRGAPGVVGPPGKEGNMGHPGPM 1137

Query: 209  GIPGRNGMDG 218
            G PG  G  G
Sbjct: 1138 GAPGTRGSSG 1147


>gi|166064040|ref|NP_112440.2| collagen alpha-1(II) chain isoform 1 precursor [Mus musculus]
 gi|125987808|sp|P28481.2|CO2A1_MOUSE RecName: Full=Collagen alpha-1(II) chain; AltName: Full=Alpha-1 type
            II collagen; Contains: RecName: Full=Collagen alpha-1(II)
            chain; Contains: RecName: Full=Chondrocalcin; Flags:
            Precursor
 gi|51895991|gb|AAH82331.1| Col2a1 protein [Mus musculus]
          Length = 1487

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/181 (42%), Positives = 89/181 (49%), Gaps = 30/181 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
            P G  GP G  G+ GAKG+ G  G++G+ GAPG  GP   PGPQG  G  G +G +G  G
Sbjct: 832  PAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQG 891

Query: 168  YPGPQGIPGDEG---------------------KRGPK---GDMGYPGRI---GLDGRDG 200
             PG  G PG  G                     K GPK   GD G PGR    GL G  G
Sbjct: 892  PPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLQGPAG 951

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PGE G  G  G +G+DG PG  GL G+ GI G  G  GE+G  G  G  G+ G  G PG
Sbjct: 952  APGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 1011

Query: 261  T 261
             
Sbjct: 1012 A 1012



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 85/193 (44%), Gaps = 48/193 (24%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQ 172
           GP G  G  GA+G  G +GE G  G  G  GPPG  G PG   D+G+ G KGD G PGPQ
Sbjct: 807 GPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQ 866

Query: 173 G---IPGDEG------------KRGPKGDMGYPGRIGL---------------------- 195
           G    PG +G             +GP G  G+PG  G                       
Sbjct: 867 GPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKD 926

Query: 196 --------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                    G  G  G+PGL G  G  G  G PG DG  G DG PG  G  G++G+ G  
Sbjct: 927 GPKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLP 986

Query: 248 GNRGKSGINGVPG 260
           G RG+ G  G+PG
Sbjct: 987 GQRGERGFPGLPG 999



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 88/190 (46%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPK--------- 163
           GP+G KG+ G  G  G KG++G KG     GP GPQG P   G+EGKRG +         
Sbjct: 447 GPLGPKGQAGEPGIAGFKGDQGPKG---ETGPAGPQGAPGPAGEEGKRGARGEPGGAGPI 503

Query: 164 ---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMD 217
              G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ 
Sbjct: 504 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTGPKGANGDPGRPGEPGLPGARGLT 563

Query: 218 GIPG---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG                             G PG  G PG  G NGE G  G +G  
Sbjct: 564 GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLA 623

Query: 251 GKSGINGVPG 260
           G  G+ G+PG
Sbjct: 624 GAPGLRGLPG 633



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 87/209 (41%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGK------------- 159
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG +G              
Sbjct: 375 GEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 434

Query: 160 --------------------------------RGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                           +GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 435 GPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGEEGKRGAR 494

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 495 GEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTGPKGANGDPGR---P 551

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 552 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 580



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 750 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 804 GEVGPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQK---GDA 860

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPG 747

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 808 PPGPSGSTGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKG 858

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 859 DAGAPGPQGPSGAPG 873



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 88/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 851  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGA 910

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G+ GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 911  NGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGP 970

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 971  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1030

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1031 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1061



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 714 GLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGP---------- 763

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 764 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGARGAP 821

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 822 GERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQG 876



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 88/209 (42%), Gaps = 60/209 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 522 GLAGPKGAPGERGPSGLTGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM- 216
                         +G PG  G  GPKG  G PG+ G     GL G PGL G+PG++G  
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAG---EKGLAGAPGLRGLPGKDGET 638

Query: 217 -----------------DGIPGK---------------------DGLPGKDGIPGTNGTN 238
                             G PG                       G+PG+ G PG  G  
Sbjct: 639 GAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPR 698

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAI 264
           GE+G  G RG+ G  G+    G+PGTP  
Sbjct: 699 GERGFPGERGSPGAQGLQGPRGLPGTPGT 727



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 99/240 (41%), Gaps = 75/240 (31%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGE-- 138
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE  
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 139 ----------KGAP---GVVGPPGPQGIP------------GDEGKRGPKGDMGYPGPQG 173
                     +GAP   G  GPPGP G              GD+G+ G KGD G PGPQG
Sbjct: 808 PPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 867

Query: 174 IPGDEGKRGP---------KGDMGYPGRIGLDG------------------------RDG 200
             G  G +GP         +G  G PG  G  G                        +DG
Sbjct: 868 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDG 927

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ GI G+PG
Sbjct: 928 PKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPG 987



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 687 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPP 746

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 747 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 806

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 807 GPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEA 854



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 78/188 (41%), Gaps = 60/188 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
            PGLQGP G  GE         KGE G+ G  G+ GPPGPQG+ G  G      +RG +G 
Sbjct: 944  PGLQGPAGAPGE---------KGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGF 994

Query: 166  MGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGI 210
             G PGP G PG +G  G  GD                G PGR G          PG DG 
Sbjct: 995  PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADGP 1045

Query: 211  PGRNGMDGIPGKDG---------------------LPGKDGIPGTNGTNGEKGMTGPRGN 249
            PGR+G  G+ G  G                       GK G  G  G  G  G +GP G 
Sbjct: 1046 PGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGA 1105

Query: 250  RGKSGING 257
            RG +G  G
Sbjct: 1106 RGIAGPQG 1113



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 75/192 (39%), Gaps = 60/192 (31%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G       +G PG+ G  GP G  G PG  GIPG +G       
Sbjct: 374 KGEAGPTGARGPEGAQGS------RGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 427

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GE    G  G PG  G 
Sbjct: 428 AGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGE 487

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGK 252
           +                     G PG  G PG+DG+ G  G  GE+   G+TGP+G  G 
Sbjct: 488 EGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTGPKGANGD 547

Query: 253 SGINGVPGTPAI 264
            G  G PG P  
Sbjct: 548 PGRPGEPGLPGA 559



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 90/226 (39%), Gaps = 84/226 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+             G +G+ 
Sbjct: 597 GQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQ 656

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QGIPG+ G  G   P+G+ G+PG        GL 
Sbjct: 657 GAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 716

Query: 197 GRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GKD 223
           G  GLPG PG D                     G+PG  G  GI             G +
Sbjct: 717 GPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 776

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 777 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGARGAPG 822



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 95/259 (36%), Gaps = 96/259 (37%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG-------------------- 137
            + G   +  E  P GL GP G  G+ G  GE G+ G RG                    
Sbjct: 522 GLAGPKGAPGERGPSGLTGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 138 -------------EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---- 180
                         +G PGV+G PGP+G  G+ GK G KG  G PG +G+PG +G+    
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAA 641

Query: 181 -----------RGPKG------------------------DMGYPGR------IGLDGRD 199
                      RG +G                        D G PG       +G  G  
Sbjct: 642 GPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGER 701

Query: 200 GLPGE---PGLDGIPGRNGMDGIPGKDGLPGK---------------DGIPGTNGTNGEK 241
           G PGE   PG  G+ G  G+ G PG DG  G                 G+PG  G  G  
Sbjct: 702 GFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIA 761

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G  G RG+ G+ G  G PG
Sbjct: 762 GPKGDRGDVGEKGPEGAPG 780



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 43/85 (50%), Gaps = 12/85 (14%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ GK G  G+ G PGPQG              G+PG  GL G  G  G PGLDG  G  
Sbjct: 255 GEAGKPGKSGERGLPGPQGA------------RGFPGTPGLPGVKGHRGYPGLDGAKGEA 302

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNG 239
           G  G+ G+ G PG++G PG  G  G
Sbjct: 303 GAPGVKGESGSPGENGSPGPMGPRG 327



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 83/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 284 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 343

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +G +G+ G PG  G 
Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGP 403

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 404 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGI 460

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 461 AGFKGDQGPKGETGPAGPQGAPG-PAGEEGKR 491


>gi|326922313|ref|XP_003207394.1| PREDICTED: collagen alpha-1(XVIII) chain-like [Meleagris gallopavo]
          Length = 1531

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 80/165 (48%), Gaps = 23/165 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
           PGL GP G++G++G  G  G  G +G KG  G  GPPG  G+ G  G  GP+        
Sbjct: 733 PGLPGPKGERGDVGDLGLPGAPGPKGSKGEAGPAGPPGETGLAGLPGPVGPRGQPGPPGP 792

Query: 164 ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                       GDM   G     G  G RGP G  G PG  G+ G  G  G+PGL   P
Sbjct: 793 PGPPGPGYEAGFGDMEGSGLPLATGSPGPRGPSGPQGVPGLPGIKGEVGSLGQPGL---P 849

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G  G+PG DG PG +G PG  G  G +G  G +G RG+ G+ 
Sbjct: 850 GPKGDAGVPGVDGRPGLEGFPGPQGPKGNRGSPGEKGERGQDGVG 894



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 89/198 (44%), Gaps = 41/198 (20%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G+ G  G KGE+G+ G+ G+ G +G+ G PGV G PG +G PG +   GPKG+ G PG
Sbjct: 827  PQGVPGLPGIKGEVGSLGQPGLPGPKGDAGVPGVDGRPGLEGFPGPQ---GPKGNRGSPG 883

Query: 171  PQGIPGDEGKR----------------------------GPKGDMGYPGRIGLDGRDGLP 202
             +G  G +G                              GP+G  G  G  G  G  G P
Sbjct: 884  EKGERGQDGVGLPGPPGPPGPPGQVIYISSEDRPLAALPGPEGRPGLAGFPGPVGPKGDP 943

Query: 203  GEPGLDGIPGRNGMDGIPG----KDG------LPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G PG+ G PG  G  G PG     DG      + G+ G PG  G  G  G  G  G +G+
Sbjct: 944  GSPGIQGAPGMKGEKGEPGVIISPDGTIVAANMKGQKGEPGLQGPMGPSGPHGRAGMKGE 1003

Query: 253  SGINGVPGTPAICAYKRE 270
             G  G PG P +   K E
Sbjct: 1004 IGFPGRPGRPGMNGLKGE 1021



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 76/160 (47%), Gaps = 29/160 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGA-------------------------PGVVG 146
            PGL+G  G +G  G +G  G KGERG+ G                            + G
Sbjct: 864  PGLEGFPGPQGPKGNRGSPGEKGERGQDGVGLPGPPGPPGPPGQVIYISSEDRPLAALPG 923

Query: 147  PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP-GRIGLDGRDGLPGEP 205
            P G  G+ G  G  GPKGD G PG QG PG +G++G  G +  P G I      G  GEP
Sbjct: 924  PEGRPGLAGFPGPVGPKGDPGSPGIQGAPGMKGEKGEPGVIISPDGTIVAANMKGQKGEP 983

Query: 206  GLD---GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            GL    G  G +G  G+ G+ G PG+ G PG NG  GEKG
Sbjct: 984  GLQGPMGPSGPHGRAGMKGEIGFPGRPGRPGMNGLKGEKG 1023



 Score = 42.7 bits (99), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 16/126 (12%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           LQ   G  G  G KGE G +G +G+ G  G++GP   +G  G++G+ G KG  G+    G
Sbjct: 485 LQVSTGGTGPKGEKGEKGERGLKGDSGTIGILGPGTAKGEKGEKGELGIKGSAGF----G 540

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE-----------PGLDGIPGRNGMDGIPGK 222
            PG +G++G  G+ G PG +     DG+  E           PG DG PGR+G  G PG+
Sbjct: 541 YPGSKGQKGEPGEPGPPGPLSRH-TDGMSLEQVTGPPGPTGPPGKDGAPGRDGEPGDPGE 599

Query: 223 DGLPGK 228
           DG PG+
Sbjct: 600 DGKPGE 605


>gi|226423931|ref|NP_031758.2| collagen alpha-1(XVII) chain [Mus musculus]
          Length = 1433

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 86/200 (43%), Gaps = 59/200 (29%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG- 179
           +G  G KG+MG +G +G++G PG  G PGP G PG EG +G KG +G PG +G  G  G 
Sbjct: 573 RGSPGPKGDMGSQGPKGDRGLPGTPGIPGPLGHPGPEGPKGQKGSIGDPGMEGPIGQRGL 632

Query: 180 -------------KRGPKGDMGYPGR---------------------------------I 193
                          G KGD G  G                                   
Sbjct: 633 AGPMGPRGEPGPPGSGEKGDRGIAGEQGPQGLPGVPGPPGLRGHSGSPGPQGPPGAVGPQ 692

Query: 194 GLDGRDGLP---GEPGLDGIPGRN---------GMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GL G  GLP   G+ GL G PG           G+ G PG  GLPG  G PG  G  G  
Sbjct: 693 GLRGDVGLPGVKGDKGLMGPPGPKGDQGEKGPRGLTGEPGIRGLPGAVGEPGAKGAMGPA 752

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G  G +G+RG+ G+ G+PGT
Sbjct: 753 GADGQQGSRGEQGLTGMPGT 772



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 86/199 (43%), Gaps = 74/199 (37%)

Query: 112 PGLQGPIGQKG--------------EIGAKGEMGVKGE---------------------- 135
           PG++GPIGQ+G                G KG+ G+ GE                      
Sbjct: 621 PGMEGPIGQRGLAGPMGPRGEPGPPGSGEKGDRGIAGEQGPQGLPGVPGPPGLRGHSGSP 680

Query: 136 --------------RGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
                         RG+ G PGV      +GPPGP+   GD+G++GP+G  G PG +G+P
Sbjct: 681 GPQGPPGAVGPQGLRGDVGLPGVKGDKGLMGPPGPK---GDQGEKGPRGLTGEPGIRGLP 737

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------------GMDGIPGKD 223
           G  G+ G KG M   G  G DG+ G  GE GL G+PG              G+ G  G  
Sbjct: 738 GAVGEPGAKGAM---GPAGADGQQGSRGEQGLTGMPGTRGPPGPAGDPGKPGLTGPQGPQ 794

Query: 224 GLPGKDGIPGTNGTNGEKG 242
           GLPG  G PGT G  G  G
Sbjct: 795 GLPGSPGRPGTKGEPGAPG 813


>gi|380798829|gb|AFE71290.1| collagen alpha-2(V) chain preproprotein, partial [Macaca mulatta]
          Length = 1469

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 92/170 (54%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G++G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 429 GPQGIRGQLGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 485

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 486 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 542

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 543 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 592



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 442 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 492

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 493 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 552

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 553 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 609



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 717 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 776

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 777 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 835

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 836 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 883



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 548 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 607

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 608 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 667

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 668 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 727

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 728 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 760



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 959  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1012

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1013 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1072

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1073 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1116



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 237 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 296

Query: 179 GK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
           G     GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 297 GSMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 356

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 357 GEAGPTGARGPEGPQGQRGET 377



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 88/182 (48%), Gaps = 36/182 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G    KGE G  G+ G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 266 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGSMGAMGPLGPRGMPGERGRLGPQGAPGQ 325

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP-- 226
            G  G+P   GK GP G +G PG  G  G  G+ GE G  G  G  G  G  G+ G P  
Sbjct: 326 RGAHGMP---GKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 382

Query: 227 ----------GKDGIPGTNGTNGEKGM------------------TGPRGNRGKSGINGV 258
                     G DG PG  G  G  G                   TGP+G RG+ G  GV
Sbjct: 383 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQLGDPGV 442

Query: 259 PG 260
           PG
Sbjct: 443 PG 444



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 504 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 563

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 564 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 618



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 671 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 730

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 731 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 790

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 791 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 837



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 786 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 845

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 846 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 899

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 900 GPLGEPGKEGPPGLRGDPGSHG 921



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1028 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1087

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1088 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1117



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 182 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGTRGPEGPPGKPGEDGEPGR 241

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 242 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGSMGA 301

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 302 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 361

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 362 TGARGPEGPQGQRG 375



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 83/206 (40%), Gaps = 57/206 (27%)

Query: 113 GLQGPIGQ------KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKR 160
           GL+GP G+      KGE G  G MG  G  G +G PG  G  GPQG PG        GK 
Sbjct: 276 GLEGPKGEVGAPGSKGEAGPTGSMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKP 335

Query: 161 GPKGDMGYPGPQGIPGDE---------GKRGPKGDMGYPGRIGLD------------GRD 199
           GP G +G PG  G PG+          G RGP+G  G  G  G              G D
Sbjct: 336 GPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTD 395

Query: 200 GLPGEPGLDGIPG------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGE- 240
           G PG  G  G PG                    G  GI G+ G PG  G  G  G  GE 
Sbjct: 396 GTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQLGDPGVPGFKGEAGPKGEP 455

Query: 241 -----KGMTGPRGNRGKSGINGVPGT 261
                +G  GP G  GK G  G PGT
Sbjct: 456 GPHGIQGPIGPPGEEGKRGPRGDPGT 481



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 87/241 (36%), Gaps = 90/241 (37%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP    G+PG +G R   GP G  
Sbjct: 819  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 878

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 879  GFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 938

Query: 194  ------------------------------GLDGRDGLPGEPGLDGIPGRNGMDGI---- 219
                                          G  G  G+PG PG  G PG+ G  G     
Sbjct: 939  GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 998

Query: 220  -----------------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                             PG +G  G DG PG +G  GE+G  G  G  G  G  G PGTP
Sbjct: 999  GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTP 1058

Query: 263  A 263
             
Sbjct: 1059 G 1059



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 81/198 (40%), Gaps = 63/198 (31%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 796 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 855

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
           P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 856 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 915

Query: 204 EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
           +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 916 DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 975

Query: 228 KDGIPGTNGTNGEKGMTG 245
             G+PG  GT G+ G TG
Sbjct: 976 MPGLPGPAGTPGKVGPTG 993


>gi|326670523|ref|XP_687811.5| PREDICTED: collagen alpha-2(IV) chain, partial [Danio rerio]
          Length = 1621

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 88/178 (49%), Gaps = 36/178 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
            PG  G  G KG  G KGE+G+ G +G KGAPG  G        GD G  GP GD      
Sbjct: 838  PGKTGERGLKGFSGTKGEIGLPGHQGAKGAPGSPG------QKGDRGLTGPPGDKPVIHI 891

Query: 167  ---------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP-------GLDGI 210
                     G  G  G  GD G  GP+G  G+PG  G +G+DG PGEP       GL G 
Sbjct: 892  TPHMKEVMKGSKGDHGNMGDPGFTGPRGTKGFPGIPGGEGKDGHPGEPSVVKGVKGLPGE 951

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            PG  G  G+PG  GLPG +G PG         M+GP+GN+G SG  G PG   I  +K
Sbjct: 952  PGLEGPKGMPGPTGLPGIEGFPG---------MSGPKGNKGSSGAYGRPGDSGIKGFK 1000



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 89/169 (52%), Gaps = 27/169 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE------------KGAPGVVGPPGP---QGIPGDE 157
            GL+G  G  G  GAKG  G+ GERG             +G PG VGPPG    QG PG +
Sbjct: 1014 GLRGETGHPGSTGAKGLYGMPGERGSSGLDGIEGMKGYQGEPGTVGPPGSDGLQGFPGSQ 1073

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--G 215
            G +G  GD G  G  GI G  G++      G+PG  G+ G DGL G+ G  G+PG +  G
Sbjct: 1074 GHKGRSGDPGQTGTTGIQGQPGQK------GFPGLKGIFGLDGLKGQKGNQGVPGTDNWG 1127

Query: 216  MDGIPGKDGLPGKDGIP----GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G PG  G  G+ GIP    G  G+ G KG TG  GN+G+ G  GVPG
Sbjct: 1128 QPGNPGTKGELGETGIPSTTTGVPGSLGHKGTTGDSGNKGEIGQRGVPG 1176



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/194 (40%), Positives = 91/194 (46%), Gaps = 41/194 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMG----------VKGERGEKGAPGVVGP---PGPQGIPGDEG 158
            PG  GP G KG  G  G  G          VKG +G  G PG+ GP   PGP G+PG EG
Sbjct: 912  PGFTGPRGTKGFPGIPGGEGKDGHPGEPSVVKGVKGLPGEPGLEGPKGMPGPTGLPGIEG 971

Query: 159  ---KRGPKGDMGYPGPQGIPGDEGKRGPKGDMG----------------YPGRIGLDGRD 199
                 GPKG+ G  G  G PGD G +G KGD+G                +PG  G  G  
Sbjct: 972  FPGMSGPKGNKGSSGAYGRPGDSGIKGFKGDLGPTISLPGSTGLRGETGHPGSTGAKGLY 1031

Query: 200  GLPGE---PGLDGIPGRNGMDG------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G+PGE    GLDGI G  G  G       PG DGL G  G  G  G +G+ G TG  G +
Sbjct: 1032 GMPGERGSSGLDGIEGMKGYQGEPGTVGPPGSDGLQGFPGSQGHKGRSGDPGQTGTTGIQ 1091

Query: 251  GKSGINGVPGTPAI 264
            G+ G  G PG   I
Sbjct: 1092 GQPGQKGFPGLKGI 1105



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 82/173 (47%), Gaps = 19/173 (10%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QGP G KG  G  G  G KG +GE G  G VGP G  G+ G  G  G  G  G+PG
Sbjct: 32  PLGPQGPTGPKGRQGEPGLQGPKGMKGEHGEAGFVGPKGSVGMEGVPGFNGADGVPGHPG 91

Query: 171 PQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR-----------NGM 216
           P G     G +G  G +GD G PG  GL+G  G PG PG+ G  G             G 
Sbjct: 92  PSGARGKAGPDGCNGTRGDSGMPGFPGLEGGQGTPGWPGMKGEKGDPLEVWVYMERFRGP 151

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR-----GNRGKSGINGVPGTPAI 264
            G PG  GLPG  G  G  G  G KG  G R     G +G+ G  G PG P +
Sbjct: 152 TGDPGYRGLPGFQGPWGPQGLKGAKGQKGERTKILKGVKGELGEIGEPGPPGV 204



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 79/163 (48%), Gaps = 16/163 (9%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGYPGPQG-- 173
            G KG  G  G  G KG  G  G PG+ G PG   P+G  G  G  G  GD G  G +G  
Sbjct: 944  GVKGLPGEPGLEGPKGMPGPTGLPGIEGFPGMSGPKGNKGSSGAYGRPGDSGIKGFKGDL 1003

Query: 174  -----IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGL 225
                 +PG  G R   G+ G+PG  G  G  G+PGE    GLDGI G  G  G PG  G 
Sbjct: 1004 GPTISLPGSTGLR---GETGHPGSTGAKGLYGMPGERGSSGLDGIEGMKGYQGEPGTVGP 1060

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            PG DG+ G  G+ G KG +G  G  G +GI G PG       K
Sbjct: 1061 PGSDGLQGFPGSQGHKGRSGDPGQTGTTGIQGQPGQKGFPGLK 1103



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 75/143 (52%), Gaps = 23/143 (16%)

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG---PKGDMGYPGRIG 194
           EKGA G+ GP GPQG  G +G++G   + G  GP+G+ G+ G+ G   PKG +G  G  G
Sbjct: 23  EKGARGLPGPLGPQGPTGPKGRQG---EPGLQGPKGMKGEHGEAGFVGPKGSVGMEGVPG 79

Query: 195 LDGRDGLPGEPGLDGIPGRNGMD---------GIPGKDGLPGKDGIPGTNGTNGEKG--- 242
            +G DG+PG PG  G  G+ G D         G+PG  GL G  G PG  G  GEKG   
Sbjct: 80  FNGADGVPGHPGPSGARGKAGPDGCNGTRGDSGMPGFPGLEGGQGTPGWPGMKGEKGDPL 139

Query: 243 -----MTGPRGNRGKSGINGVPG 260
                M   RG  G  G  G+PG
Sbjct: 140 EVWVYMERFRGPTGDPGYRGLPG 162



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 77/145 (53%), Gaps = 3/145 (2%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G+ G +G+ G KGA G+ G PG +G+PG +G++G   +    G  G PGD G  G  G+ 
Sbjct: 425 GQQGDQGDPGTKGANGLPGFPGTEGLPGPKGRKGELMEAVQKGSAGDPGDPGHSGFPGEQ 484

Query: 188 GYPGRIGLDGRDGLPGEPGLD--GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           G PG  G DG  G  G PG    G PG  G  G PG+ GL G  G PG       KG++G
Sbjct: 485 GRPGIDGRDGEPGFRGPPGEGPVGEPGAKGYSGPPGRSGLIGPKGNPGQV-LGATKGLSG 543

Query: 246 PRGNRGKSGINGVPGTPAICAYKRE 270
             G+ G++G +G  G P   A + E
Sbjct: 544 LPGDDGQTGPDGRTGPPGPPAQEEE 568



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 102/214 (47%), Gaps = 47/214 (21%)

Query: 112  PGLQGPIGQKGE------IGAKGEMGVKGERGEK---------------GAPGVVGPPGP 150
            PG+  P G KG+       G  GE GV+G+RGEK               G PG++G PG 
Sbjct: 1211 PGIPSPFGAKGDRGNVGDFGLFGEKGVQGDRGEKGSSGESGVSGRKGDKGEPGMMGFPGR 1270

Query: 151  QGIPGDEGKRGPKGDM------------GYPG-PQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            +G  GD G  GPKGD             GYP  PQ +PG++G          PG++G+ G
Sbjct: 1271 RGFQGDRGPFGPKGDTGPPGFPGLPGAKGYPPVPQKLPGEQGP---------PGQMGIQG 1321

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G  G PG  G PG +G  G  G  G+PG  GIPG+ G  GE G  G  G +G+ G  G
Sbjct: 1322 PSGRNGNPGPAGPPGDSGFVGPSGHKGMPGLPGIPGSPGFRGEPGSMGHSGLQGEQGTRG 1381

Query: 258  VPGTPAICAYKRESCS----LLPNSETSQLLIPP 287
             PG P        S +    L+ +S++ ++ + P
Sbjct: 1382 RPGMPGPLGMAGRSVNVGYLLVKHSQSEEIPMCP 1415



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 86/226 (38%), Gaps = 69/226 (30%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGV-------------VGPPGPQGI--------------P 154
           G  G +G  G  GE GE G P               VGPPGP+G               P
Sbjct: 324 GPEGPRGPKGASGETGEPGNPATQPGPPGPDGSPGSVGPPGPKGSLEEYFKGSPGHRGRP 383

Query: 155 GDEGKRGPKGDMGYP--------------------------GPQGIPGDEGKRGPKGDMG 188
           G  GK+GPKGD G                            G QG  GD G +G  G  G
Sbjct: 384 GSAGKKGPKGDHGLCECSVKPPPGPPGPPGDSGDPGMAGEWGQQGDQGDPGTKGANGLPG 443

Query: 189 YPGRIGLDGRDGL---------------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
           +PG  GL G  G                PG+PG  G PG  G  GI G+DG PG  G PG
Sbjct: 444 FPGTEGLPGPKGRKGELMEAVQKGSAGDPGDPGHSGFPGEQGRPGIDGRDGEPGFRGPPG 503

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
             G  GE G  G  G  G+SG+ G  G P       +  S LP  +
Sbjct: 504 -EGPVGEPGAKGYSGPPGRSGLIGPKGNPGQVLGATKGLSGLPGDD 548



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 86/194 (44%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQGIPGDEGKRGPKGDMGY 168
           PG  G  G +G+ G  G+ G+ G  G +G PG+ G     GP G+ G++G+ GP G  G+
Sbjct: 691 PGDPGLPGHRGDTGLTGDPGLPGYFGMEGMPGMTGLKGESGPPGLQGEQGRPGPPGTFGF 750

Query: 169 PGP------------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           PG                         QG PG  G RG KG +G PG IG+ G  G PG+
Sbjct: 751 PGQTGYTGPPGPPGNIGEPGPSGRRGDQGEPGLIGARGVKGAIGDPGNIGVTGNIGPPGD 810

Query: 205 ---------------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
                                 G+ G PG+ G  G+ G  G  G+ G+PG  G  G  G 
Sbjct: 811 QGETGGPGFFGLPGLKGSKGGQGMTGFPGKTGERGLKGFSGTKGEIGLPGHQGAKGAPGS 870

Query: 244 TGPRGNRGKSGING 257
            G +G+RG +G  G
Sbjct: 871 PGQKGDRGLTGPPG 884



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 81/161 (50%), Gaps = 9/161 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--GIPGDEGKRGPKGDMGYPG 170
            G+QG  GQKG  G KG  G+ G +G+KG  GV   PG    G PG+ G +G  G+ G P 
Sbjct: 1089 GIQGQPGQKGFPGLKGIFGLDGLKGQKGNQGV---PGTDNWGQPGNPGTKGELGETGIPS 1145

Query: 171  PQ-GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
               G+PG  G +G  GD G  G IG  G  G  G+ G   I G  G  G PG  G+PG  
Sbjct: 1146 TTTGVPGSLGHKGTTGDSGNKGEIGQRGVPGPQGQQGFSDIKGTQGDYGFPGIKGIPG-- 1203

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
              PGT GT G     G +G+RG  G  G+ G   +   + E
Sbjct: 1204 -FPGTRGTPGIPSPFGAKGDRGNVGDFGLFGEKGVQGDRGE 1243



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 58/106 (54%), Gaps = 8/106 (7%)

Query: 161 GPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIG--LDGRDGLPGEPGLDGIPGRNG 215
           GP+GD+GYPG +G+   PG  GK G  G  G  G  G       G PG+PGL   PG  G
Sbjct: 645 GPRGDLGYPGTKGVKGPPGLSGKPGLDGASGGKGEHGEVFGASSGAPGDPGL---PGHRG 701

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G+ G  GLPG  G+ G  G  G KG +GP G +G+ G  G PGT
Sbjct: 702 DTGLTGDPGLPGYFGMEGMPGMTGLKGESGPPGLQGEQGRPGPPGT 747



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 68/145 (46%), Gaps = 13/145 (8%)

Query: 132 VKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG------YPGPQGIPGDEGKRG 182
           + GE   +G++G PG  G  G  G PG EG  GPKG  G        G  G PGD G  G
Sbjct: 420 MAGEWGQQGDQGDPGTKGANGLPGFPGTEGLPGPKGRKGELMEAVQKGSAGDPGDPGHSG 479

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLD--GIPGRNGMDGIPGKDGLPGKDGIPGT--NGTN 238
             G+ G PG  G DG  G  G PG    G PG  G  G PG+ GL G  G PG     T 
Sbjct: 480 FPGEQGRPGIDGRDGEPGFRGPPGEGPVGEPGAKGYSGPPGRSGLIGPKGNPGQVLGATK 539

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G+ G  G  G  G  G PG PA
Sbjct: 540 GLSGLPGDDGQTGPDGRTGPPGPPA 564



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 98/237 (41%), Gaps = 44/237 (18%)

Query: 69  IREREKEQQNSTHNNPWVWLNAYSRIPLVAMQG---FCNSTKEYCPPGLQGPIGQKGEIG 125
           I+E E  Q+   H +  +    +  I     +G   +  +     PPGL G  G  G  G
Sbjct: 616 IKESEVNQEEEAHLDQRILSFDFDYIGFTGPRGDLGYPGTKGVKGPPGLSGKPGLDGASG 675

Query: 126 AKGEMG-----VKGERGEKGAPG------VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            KGE G       G  G+ G PG      + G PG  G  G EG  G  G  G  GP G+
Sbjct: 676 GKGEHGEVFGASSGAPGDPGLPGHRGDTGLTGDPGLPGYFGMEGMPGMTGLKGESGPPGL 735

Query: 175 PGDEGKRGPKGDMGYPGRI---------------GLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G++G+ GP G  G+PG+                G  GR G  GEPGL G  G  G  G 
Sbjct: 736 QGEQGRPGPPGTFGFPGQTGYTGPPGPPGNIGEPGPSGRRGDQGEPGLIGARGVKGAIGD 795

Query: 220 PGKDGLPGKDGIPG---------------TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG  G+ G  G PG                 G+ G +GMTG  G  G+ G+ G  GT
Sbjct: 796 PGNIGVTGNIGPPGDQGETGGPGFFGLPGLKGSKGGQGMTGFPGKTGERGLKGFSGT 852



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 86/213 (40%), Gaps = 73/213 (34%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G +G KG  G  G +GE G  GV GP G QG       +G +GD G+PG +GIPG  G R
Sbjct: 1152 GSLGHKGTTGDSGNKGEIGQRGVPGPQGQQGF---SDIKGTQGDYGFPGIKGIPGFPGTR 1208

Query: 182  ---------GPKGDMGYPGRIGLDG---------------------RDGLPGEPGLDGIP 211
                     G KGD G  G  GL G                     R G  GEPG+ G P
Sbjct: 1209 GTPGIPSPFGAKGDRGNVGDFGLFGEKGVQGDRGEKGSSGESGVSGRKGDKGEPGMMGFP 1268

Query: 212  GRNGMDG-------------------------------IPGKDGLPGKDGIPGTNG---- 236
            GR G  G                               +PG+ G PG+ GI G +G    
Sbjct: 1269 GRRGFQGDRGPFGPKGDTGPPGFPGLPGAKGYPPVPQKLPGEQGPPGQMGIQGPSGRNGN 1328

Query: 237  -----TNGEKGMTGPRGNRGKSGINGVPGTPAI 264
                   G+ G  GP G++G  G+ G+PG+P  
Sbjct: 1329 PGPAGPPGDSGFVGPSGHKGMPGLPGIPGSPGF 1361



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 54/105 (51%), Gaps = 12/105 (11%)

Query: 163 KGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           KG  G PGP   QG        GPKG  G PG  G  G  G  GE G  G  G  GM+G+
Sbjct: 24  KGARGLPGPLGPQGPT------GPKGRQGEPGLQGPKGMKGEHGEAGFVGPKGSVGMEGV 77

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PG +G    DG+PG  G +G +G  GP G  G  G +G+PG P +
Sbjct: 78  PGFNGA---DGVPGHPGPSGARGKAGPDGCNGTRGDSGMPGFPGL 119



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 84/182 (46%), Gaps = 42/182 (23%)

Query: 112 PGLQGPIGQKGE------IGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGP 162
           PGLQGP G KGE      +G KG +G++G  G  GA GV G PGP G     G +G  G 
Sbjct: 48  PGLQGPKGMKGEHGEAGFVGPKGSVGMEGVPGFNGADGVPGHPGPSGARGKAGPDGCNGT 107

Query: 163 KGDMGYPG------PQGIPGDEGKRGPKGD--------------MGYPGRIGLDGRDGLP 202
           +GD G PG       QG PG  G +G KGD               G PG  GL G  G  
Sbjct: 108 RGDSGMPGFPGLEGGQGTPGWPGMKGEKGDPLEVWVYMERFRGPTGDPGYRGLPGFQGPW 167

Query: 203 GEPGLDGIPGRNG-----MDGIPGKDGLPGKDGIPGTNGT--------NGEKGMTGPRGN 249
           G  GL G  G+ G     + G+ G+ G  G+ G PG             GEKG  G +G+
Sbjct: 168 GPQGLKGAKGQKGERTKILKGVKGELGEIGEPGPPGVFSQTSPIPSDWQGEKGKMGSKGD 227

Query: 250 RG 251
           +G
Sbjct: 228 KG 229



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 72/157 (45%), Gaps = 30/157 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV--------------KGERGEKGAP----GVVGPPGPQGI 153
            PGL+G  G  G  G KG  GV              KGE GE G P    GV G  G +G 
Sbjct: 1100 PGLKGIFGLDGLKGQKGNQGVPGTDNWGQPGNPGTKGELGETGIPSTTTGVPGSLGHKGT 1159

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             GD G +G  G  G PGPQG  G    +G +GD G+P      G  G+PG PG  G P  
Sbjct: 1160 TGDSGNKGEIGQRGVPGPQGQQGFSDIKGTQGDYGFP------GIKGIPGFPGTRGTP-- 1211

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                GIP   G  G  G  G  G  GEKG+ G RG +
Sbjct: 1212 ----GIPSPFGAKGDRGNVGDFGLFGEKGVQGDRGEK 1244



 Score = 46.2 bits (108), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 91/237 (38%), Gaps = 80/237 (33%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------------------VKGERG 137
           +  M G      E  PPGLQG  G+ G  G  G  G                    G RG
Sbjct: 717 MEGMPGMTGLKGESGPPGLQGEQGRPGPPGTFGFPGQTGYTGPPGPPGNIGEPGPSGRRG 776

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGK----------- 180
           ++G PG++G             RG KG +G PG  G+      PGD+G+           
Sbjct: 777 DQGEPGLIG------------ARGVKGAIGDPGNIGVTGNIGPPGDQGETGGPGFFGLPG 824

Query: 181 ----RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI----- 231
               +G +G  G+PG+ G  G  G  G  G  G+PG  G  G PG  G  G  G+     
Sbjct: 825 LKGSKGGQGMTGFPGKTGERGLKGFSGTKGEIGLPGHQGAKGAPGSPGQKGDRGLTGPPG 884

Query: 232 ------------------PGTNGTNGEKGMTGPRGNRGKSGI------NGVPGTPAI 264
                              G +G  G+ G TGPRG +G  GI      +G PG P++
Sbjct: 885 DKPVIHITPHMKEVMKGSKGDHGNMGDPGFTGPRGTKGFPGIPGGEGKDGHPGEPSV 941



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 73/162 (45%), Gaps = 46/162 (28%)

Query: 103 CNSTK--EYCP--PGLQGPIGQKGEIGAKGE--------------MGVKGERGEKGAPGV 144
           CN T+     P  PGL+G  G  G  G KGE               G  G+ G +G PG 
Sbjct: 104 CNGTRGDSGMPGFPGLEGGQGTPGWPGMKGEKGDPLEVWVYMERFRGPTGDPGYRGLPGF 163

Query: 145 VGPPGPQGIPGDEGKRGPK-----------GDMGYPGPQGI-----------PGDEGKRG 182
            GP GPQG+ G +G++G +           G++G PGP G+            G++GK G
Sbjct: 164 QGPWGPQGLKGAKGQKGERTKILKGVKGELGEIGEPGPPGVFSQTSPIPSDWQGEKGKMG 223

Query: 183 PKGDMGYPGRI------GLDGRDGLPGEPGLDGIPGRNGMDG 218
            KGD G  G +      G+ G  G  G+ GL G PG NG  G
Sbjct: 224 SKGDKGDLGYLSTKAESGVSGFAGARGDTGLPGFPGNNGRKG 265


>gi|119569214|gb|EAW48829.1| collagen, type XIX, alpha 1, isoform CRA_b [Homo sapiens]
          Length = 719

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 91/200 (45%), Gaps = 58/200 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  GP GQKGE    GE   KGE+G++G PGV+G                       G 
Sbjct: 366 PGSVGPKGQKGE---PGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQ 422

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK----------------GDMGYPGRIG 194
           QG  G  G RGP GD+G PG  GIPG +G +G K                G+ G PG+  
Sbjct: 423 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKS- 481

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGM 243
                 LPGEPGLDG PG  G  G  G+ GLPG             GIPG  G  G  G 
Sbjct: 482 ------LPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGE 535

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            G +G RG  G+ G PGTP 
Sbjct: 536 PGIQGPRGLPGLPGTPGTPG 555



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 70/147 (47%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG----------------EK 139
           L   QG   S     PPG    +G  GE G  G+ G+KGE+G                E 
Sbjct: 419 LKGQQGSAGSMGPRGPPG---DVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEA 475

Query: 140 GAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPG---------PQGI--PGDEGKRGPKGD 186
           G PG  + G PG  G PG  G RGPKG+ G PG         PQGI  PG  G +GP G+
Sbjct: 476 GPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGE 535

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG+PGR
Sbjct: 536 PGIQGPRGLPGLPGTPGTPGNDGVPGR 562



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 80/196 (40%), Gaps = 62/196 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  G +G KG+ G  GE   KGE+G++G PGV+G                       G 
Sbjct: 363 PGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQ 422

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK-------------------------- 184
           QG  G  G RGP GD+G PG  GIPG +G +G K                          
Sbjct: 423 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKSL 482

Query: 185 -------GDMGYPGRIGLDGRDGLPG--------EPGLDGIPGRNGMDGIPGKDGLPGKD 229
                  G+ G PG  G  G  GLPG         P   GIPGR G  G  G+ G+ G  
Sbjct: 483 PGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGEPGIQGPR 542

Query: 230 GIPGTNGTNGEKGMTG 245
           G+PG  GT G  G  G
Sbjct: 543 GLPGLPGTPGTPGNDG 558



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 78/168 (46%), Gaps = 33/168 (19%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A G  G KGE G  G PG VGP G +G PG+   +G KGD G PG  G  G +G+ G  G
Sbjct: 350 AGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPG 409

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI-------------- 231
             G  G  GL G+ G  G  G  G PG  G+   PG+ G+PGK GI              
Sbjct: 410 PPGLIGSPGLKGQQGSAGSMGPRGPPGDVGL---PGEHGIPGKQGIKGEKGDPGGIIGPP 466

Query: 232 ----------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                           PG  G +G  G  GPRG +G+ G+ GV G+P 
Sbjct: 467 GLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPG 514



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 93/242 (38%), Gaps = 80/242 (33%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGP 162
           +  PG  G  G++G  G+KGE G KGE+GEKG P + G  G  G+ GD       G +G 
Sbjct: 214 HGAPGFPGQKGEQGFEGSKGETGEKGEQGEKGDPALAGLNGENGLKGDLGPHGPPGPKGE 273

Query: 163 KGD------------MGYPGPQGIPGDEGKRGP--------------------------- 183
           KGD            +G  GPQG PG EG+RG                            
Sbjct: 274 KGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQT 333

Query: 184 --------------------KGDMG------YPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
                               KGD G      +PG +G  G+ G PGEP   G  G  G  
Sbjct: 334 LGGYYNKDNKGNDEHEAGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEP 393

Query: 218 GIPGKDGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+ G  G+ G+          G PG  G  G  G  GPRG  G  G+ G  G P     K
Sbjct: 394 GVIGSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIK 453

Query: 269 RE 270
            E
Sbjct: 454 GE 455



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 9/84 (10%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KGE G  G  G  G++G KG PG  G  G  G PG       KG+ G+ G +G  G++G+
Sbjct: 187 KGEAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQ------KGEQGFEGSKGETGEKGE 240

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGE 204
           +G KGD   P   GL+G +GL G+
Sbjct: 241 QGEKGD---PALAGLNGENGLKGD 261



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G PG    PG  G++G KG+   PG  GL G  G PG+ G  G  G  G  G  G+
Sbjct: 187 KGEAGLPG---APGSPGQKGHKGE---PGENGLHGAPGFPGQKGEQGFEGSKGETGEKGE 240

Query: 223 DGLPGKDGIPGTNGTNGEKG 242
            G  G   + G NG NG KG
Sbjct: 241 QGEKGDPALAGLNGENGLKG 260



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 34/69 (49%)

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE GL G PG  G  G  G+ G  G  G PG  G  GE+G  G +G  G+ G  G  G P
Sbjct: 188 GEAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQKGEQGFEGSKGETGEKGEQGEKGDP 247

Query: 263 AICAYKRES 271
           A+     E+
Sbjct: 248 ALAGLNGEN 256



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 58/127 (45%), Gaps = 11/127 (8%)

Query: 68  EIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEY-----CPP--GLQGPIGQ 120
           EI + +  +Q+   N    W+ A++      M  +  + +E      C P  G  G  G 
Sbjct: 140 EISDTKCPEQDGFGNIASSWVTAHAS----KMSSYLPAKQELKDQCQCIPNKGEAGLPGA 195

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            G  G KG  G  GE G  GAPG  G  G QG  G +G+ G KG+ G  G   + G  G+
Sbjct: 196 PGSPGQKGHKGEPGENGLHGAPGFPGQKGEQGFEGSKGETGEKGEQGEKGDPALAGLNGE 255

Query: 181 RGPKGDM 187
            G KGD+
Sbjct: 256 NGLKGDL 262


>gi|358342177|dbj|GAA49702.1| collagen alpha-2(V) chain [Clonorchis sinensis]
          Length = 1673

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/138 (45%), Positives = 75/138 (54%), Gaps = 15/138 (10%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-------- 147
           L  ++G    T    P G+QG  G KGE GA GE G +G RG  G PG  GP        
Sbjct: 363 LKGVRGARGMTGNPGPDGMQGERGIKGEPGAPGETGFQGPRGPLGMPGRPGPAGRPGLDG 422

Query: 148 ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
               PG  G PG++G+    GD GY GP+G+ G+ G RGPKGD+G PG  G  G  G PG
Sbjct: 423 SRGDPGANGAPGEDGR---PGDSGYMGPKGLKGEVGPRGPKGDVGLPGGEGPRGPVGEPG 479

Query: 204 EPGLDGIPGRNGMDGIPG 221
           E G  G+PG  G  GIPG
Sbjct: 480 EQGDVGLPGLQGPVGIPG 497



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 89/179 (49%), Gaps = 35/179 (19%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG----IP-----GD-------- 156
           L+GP+G  G +G  G+ G  G  G  G PG  G PGP G    IP     GD        
Sbjct: 292 LRGPMGATGAMGPPGDKGEMGHNGSTGLPGEPGQPGPAGSLFVIPLNLGVGDANYARAAV 351

Query: 157 ------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---GL 201
                       +G RG +G  G PGP G+   +G+RG KG+ G PG  G  G     G+
Sbjct: 352 FRDLLQKHLLSLKGVRGARGMTGNPGPDGM---QGERGIKGEPGAPGETGFQGPRGPLGM 408

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG PG  G PG +G  G PG +G PG+DG PG +G  G KG+ G  G RG  G  G+PG
Sbjct: 409 PGRPGPAGRPGLDGSRGDPGANGAPGEDGRPGDSGYMGPKGLKGEVGPRGPKGDVGLPG 467



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 93/220 (42%), Gaps = 60/220 (27%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPG 143
            +  +QG   S  E  PPGL+GP+G  GE G +G  G            VKG +G KGAPG
Sbjct: 1107 ISGLQGPVGSPGEEGPPGLEGPLGDMGEQGIQGPKGETGPPGLPGPAGVKGPQGAKGAPG 1166

Query: 144  VVGP------------------------------PGPQGIPGDEGKRGPKGDMGYPGPQG 173
             VG                                GPQG  G  G++G KG+ G  GP  
Sbjct: 1167 GVGEDGSLGPRGKPGEPGSRGPPGPPGPEGSPGMTGPQGPDGPRGQKGVKGETGEVGP-- 1224

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             PG+ G+RGP G  G  G  G  G+ G PG  GL G  G  G DG+ G  G PG+ G PG
Sbjct: 1225 -PGEPGRRGPIGASGPRGPPGAMGQRGQPGSIGLPGSQGDRGPDGVTGPHGDPGEAGKPG 1283

Query: 234  TNGTNG---------------EKGMTGPRGNRGKSGINGV 258
              G  G               EKG+ G  G RG  G  G 
Sbjct: 1284 PKGIKGADGPIGPMGPPGPKGEKGIPGLSGERGPPGPKGA 1323



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 83/180 (46%), Gaps = 51/180 (28%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E  P GL GP G +G  G+ G++G++G      APG+ GPPG             KGD G
Sbjct: 1011 EEGPQGLSGPEGTRGIAGSPGQVGMRG------APGISGPPGE------------KGDAG 1052

Query: 168  YPGPQ---------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
             PGP+               G+PGD G  GP    G  G  G  G+ G PG PG +GI G
Sbjct: 1053 TPGPRGRTGSPGLPGPPGQAGVPGDIGSLGPP---GMAGEKGDAGQQGPPGSPGFEGISG 1109

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------RGKSGINGVPG 260
              G  G PG++G P   G+ G  G  GE+G+ GP+G             +G  G  G PG
Sbjct: 1110 LQGPVGSPGEEGPP---GLEGPLGDMGEQGIQGPKGETGPPGLPGPAGVKGPQGAKGAPG 1166



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 74/144 (51%), Gaps = 9/144 (6%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G +G  G  G  G++GERG KG PG    PG  G    +G RGP G  G PGP G
Sbjct: 363 LKGVRGARGMTGNPGPDGMQGERGIKGEPGA---PGETGF---QGPRGPLGMPGRPGPAG 416

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            PG +G RG  G  G PG    DGR G  G  G  G+ G  G  G  G  GLPG +G  G
Sbjct: 417 RPGLDGSRGDPGANGAPGE---DGRPGDSGYMGPKGLKGEVGPRGPKGDVGLPGGEGPRG 473

Query: 234 TNGTNGEKGMTGPRGNRGKSGING 257
             G  GE+G  G  G +G  GI G
Sbjct: 474 PVGEPGEQGDVGLPGLQGPVGIPG 497



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/163 (42%), Positives = 79/163 (48%), Gaps = 21/163 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------ 160
           G  GP+G  G IG  G  G  G  G  G  G VG PGP G PG  G+             
Sbjct: 743 GAVGPVGPAGPIGEPGVQGPMGPVGPPGQQGAVGRPGPAGFPGPRGEPGERGPPGQPGPL 802

Query: 161 ---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---IPGRN 214
              GP G  G PGP G  G  G RGP GD G   + GL GRDG PG+ G+ G   +PG  
Sbjct: 803 GATGPTGATGDPGPDGERGPVGPRGPTGDTG---KDGLPGRDGSPGQKGVRGPQGLPGGR 859

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G DGLPG+ G PG  G  G  G  GP G++G  G  G
Sbjct: 860 GPRGFSGFDGLPGRSGPPGAKGETGPDGEVGPIGSKGYQGDQG 902



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 86/186 (46%), Gaps = 36/186 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G  G  G KG+ G +G  G  G  G+ G  GP G PG+EG  G +G +G  G 
Sbjct: 1075 PGDIGSLGPPGMAGEKGDAGQQGPPGSPGFEGISGLQGPVGSPGEEGPPGLEGPLGDMGE 1134

Query: 172  QGIPGDEGK------------RGPKGDMGYPGRIGLDGRDG------------------- 200
            QGI G +G+            +GP+G  G PG +G DG  G                   
Sbjct: 1135 QGIQGPKGETGPPGLPGPAGVKGPQGAKGAPGGVGEDGSLGPRGKPGEPGSRGPPGPPGP 1194

Query: 201  -----LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                 + G  G DG  G+ G+ G  G+ G PG+ G  G  G +G +G  G  G RG+ G 
Sbjct: 1195 EGSPGMTGPQGPDGPRGQKGVKGETGEVGPPGEPGRRGPIGASGPRGPPGAMGQRGQPGS 1254

Query: 256  NGVPGT 261
             G+PG+
Sbjct: 1255 IGLPGS 1260



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 84/187 (44%), Gaps = 45/187 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
            PG +GP G+ G +G  G  G +GE+G KGA G        G+ GD+G  G +G  G    
Sbjct: 940  PGPRGPQGRPGPVGQIGPQGFEGEKGSKGASGS------PGVKGDKGANGIRGPPGPVGS 993

Query: 170  -------------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
                               GPQG+ G EG R   G  G PG++G+       G PG+ G 
Sbjct: 994  PGLPGIQGPPGIPGQPGEEGPQGLSGPEGTR---GIAGSPGQVGMR------GAPGISGP 1044

Query: 211  PGRNGMDGIPGKDG---------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            PG  G  G PG  G          PG+ G+PG  G+ G  GM G +G+ G+ G  G PG 
Sbjct: 1045 PGEKGDAGTPGPRGRTGSPGLPGPPGQAGVPGDIGSLGPPGMAGEKGDAGQQGPPGSPGF 1104

Query: 262  PAICAYK 268
              I   +
Sbjct: 1105 EGISGLQ 1111



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMG 167
           P G  G  GQKGE G +G  G KGERG  GA G+    G PGP G+ G+ G +G KGD+G
Sbjct: 579 PKGESGDPGQKGEAGVQGPRGYKGERGRMGAVGIKGDTGKPGPIGVAGEIGPKGLKGDIG 638

Query: 168 YPGPQGIPG 176
             GP G PG
Sbjct: 639 LIGPVGRPG 647



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 71/181 (39%), Gaps = 48/181 (26%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------------KGDM 166
            G  G  G  G +GE G  G VGP G +G  GD+G  GP                  KG  
Sbjct: 869  GLPGRSGPPGAKGETGPDGEVGPIGSKGYQGDQGPMGPIGSPGSMGPRGPPGPAGEKGTT 928

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL- 225
            G  GP G+ G  G RGP+   G PG +G  G  G  GE G  G  G  G+ G  G +G+ 
Sbjct: 929  GLDGPYGLVGSPGPRGPQ---GRPGPVGQIGPQGFEGEKGSKGASGSPGVKGDKGANGIR 985

Query: 226  --------------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
                                       G  G+ G  GT G  G  G  G RG  GI+G P
Sbjct: 986  GPPGPVGSPGLPGIQGPPGIPGQPGEEGPQGLSGPEGTRGIAGSPGQVGMRGAPGISGPP 1045

Query: 260  G 260
            G
Sbjct: 1046 G 1046



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 82/180 (45%), Gaps = 24/180 (13%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV---------KGERGEK------------ 139
           G   +T +  P G +GP+G +G  G  G+ G+         KG RG +            
Sbjct: 806 GPTGATGDPGPDGERGPVGPRGPTGDTGKDGLPGRDGSPGQKGVRGPQGLPGGRGPRGFS 865

Query: 140 ---GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
              G PG  GPPG +G  G +G+ GP G  GY G QG  G  G  G  G  G PG  G  
Sbjct: 866 GFDGLPGRSGPPGAKGETGPDGEVGPIGSKGYQGDQGPMGPIGSPGSMGPRGPPGPAGEK 925

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  GL G  GL G PG  G  G PG  G  G  G  G  G+ G  G  G +G++G +GI 
Sbjct: 926 GTTGLDGPYGLVGSPGPRGPQGRPGPVGQIGPQGFEGEKGSKGASGSPGVKGDKGANGIR 985



 Score = 46.6 bits (109), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 55/140 (39%), Gaps = 50/140 (35%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------- 206
           +G MG  G  G PGD      KG+MG+      +G  GLPGEPG                
Sbjct: 293 RGPMGATGAMGPPGD------KGEMGH------NGSTGLPGEPGQPGPAGSLFVIPLNLG 340

Query: 207 ----------------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                                 L G+ G  GM G PG DG+ G+ GI G  G  GE G  
Sbjct: 341 VGDANYARAAVFRDLLQKHLLSLKGVRGARGMTGNPGPDGMQGERGIKGEPGAPGETGFQ 400

Query: 245 GPRGNRGKSGINGVPGTPAI 264
           GPRG  G  G  G  G P +
Sbjct: 401 GPRGPLGMPGRPGPAGRPGL 420



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 3/72 (4%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKG 185
           ++G KGE G+ G  G  G  GP+G  G+ G+ G    KGD G PGP G+ G+ G +G KG
Sbjct: 576 DIGPKGESGDPGQKGEAGVQGPRGYKGERGRMGAVGIKGDTGKPGPIGVAGEIGPKGLKG 635

Query: 186 DMGYPGRIGLDG 197
           D+G  G +G  G
Sbjct: 636 DIGLIGPVGRPG 647



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 87/229 (37%), Gaps = 81/229 (35%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---------------PGDE 157
           G++G  G+ G IG  GE+G KG +G+ G  G VG PGP G                PG +
Sbjct: 611 GIKGDTGKPGPIGVAGEIGPKGLKGDIGLIGPVGRPGPMGEKGNPGPPGPIGARGDPGGK 670

Query: 158 ------------------------GKRGPKGDMGYPGPQGIPGDEGKRG----------- 182
                                   G RG  GD G  G QG PGD G++G           
Sbjct: 671 GFAGAVGPPGPPGPDGERGPIGPTGPRGRDGDKGEVGGQGPPGDSGEQGQRGLPGPRGPP 730

Query: 183 -------PKGDMGYPGRIGLDGRDGLPG---------EPGLDGIPGRNGMDGIPGKDG-- 224
                   KGD G  G +G  G  G PG          PG  G  GR G  G PG  G  
Sbjct: 731 GRPGPIGIKGDAGAVGPVGPAGPIGEPGVQGPMGPVGPPGQQGAVGRPGPAGFPGPRGEP 790

Query: 225 -------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                          G  G  G  G +GE+G  GPRG  G +G +G+PG
Sbjct: 791 GERGPPGQPGPLGATGPTGATGDPGPDGERGPVGPRGPTGDTGKDGLPG 839


>gi|281351911|gb|EFB27495.1| hypothetical protein PANDA_007210 [Ailuropoda melanoleuca]
          Length = 1440

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 67/114 (58%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KGEMG  G  G  G  G  GPPGP G  G  G+RG  G+ G  G +G PG  G+RG  G 
Sbjct: 369 KGEMGPAGIPGAPGLIGARGPPGPAGTNGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGS 428

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
            G PG  G DG+DG PGEPG +G+PG  G  G PG  G  G +G+PG  G +GE
Sbjct: 429 PGIPGPKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGANGLPGEKGPSGE 482



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 9/109 (8%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
           G+ GE G PG    PG +G+PG  G +GP G  G+PG +G  G +G+ G KGD G P   
Sbjct: 202 GKDGESGRPGR---PGERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGDTGAP--- 255

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           GL G +GLPGE   +G PG  G  G PG+ G PG  G  G  G +G +G
Sbjct: 256 GLKGENGLPGE---NGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARG 301



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 54/100 (54%)

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK G  G  G PG +G+PG  G +GP G  G+PG  G  G DG  GE G  G PG  G +
Sbjct: 202 GKDGESGRPGRPGERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGDTGAPGLKGEN 261

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G+PG++G PG  G  G  G  G  G+ G  G RG  G  G
Sbjct: 262 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARG 301



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/107 (45%), Positives = 56/107 (52%), Gaps = 6/107 (5%)

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGM 216
           +G  G  G PG  G+ G  G  GP G  G PG+    G  G++G  GEPG  G  G  G 
Sbjct: 369 KGEMGPAGIPGAPGLIGARGPPGPAGTNGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGS 428

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
            GIPG  G  GKDG PG  G NG  G  G RG    RG +G NG+PG
Sbjct: 429 PGIPGPKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGANGLPG 475



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 63/124 (50%), Gaps = 12/124 (9%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G          PG +G  G+ G+ GAKGE G +GERGE G+PG+   PGP+G  G
Sbjct: 383 LIGARGPPGPAGTNGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGSPGI---PGPKGEDG 439

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------EPG 206
            +G  G  G  G PG  G  G  G RGP G  G PG  G  G  G PG         EPG
Sbjct: 440 KDGSPGEPGANGLPGAAGERGAPGFRGPAGANGLPGEKGPSGERGGPGPAGPRGAPGEPG 499

Query: 207 LDGI 210
            DG+
Sbjct: 500 RDGV 503



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 87/201 (43%), Gaps = 54/201 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------- 161
           PGL+G  G  GE GA G MG +G  GE+G PG+   PG  G  G++G RG          
Sbjct: 255 PGLKGENGLPGENGAPGPMGPRGAPGERGRPGL---PGAAGARGNDGARGSDGQPGPPGP 311

Query: 162 -----------PKGDM---------------GYPGPQGIPGDEGK------------RGP 183
                       KG++               G PGPQG  G  G             +G 
Sbjct: 312 PGTAGFPGSPGAKGEVGPAGSPGSSGSPGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGE 371

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G  G PG  GL G  G PG  G +G PG+ G  G PGK+G  G+   PG  G  GE G 
Sbjct: 372 MGPAGIPGAPGLIGARGPPGPAGTNGAPGQRGAAGEPGKNGAKGE---PGPRGERGEAGS 428

Query: 244 TGPRGNRGKSGINGVPGTPAI 264
            G  G +G+ G +G PG P  
Sbjct: 429 PGIPGPKGEDGKDGSPGEPGA 449



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 53/102 (51%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 202 GKDGESGRPGRPGERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGDTGAPGLKGEN 261

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G+ G PG +G  G  G  G PGL G  G  G DG  G D
Sbjct: 262 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSD 303



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  GM G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 201 AGKDGESGRPGRPGERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGDTGAPGLKGE 260

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 261 NGLPGENGAPG 271



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 43/78 (55%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 221 PPGMKGPAGMPGFPGMKGHRGFDGRNGEKGDTGAPGLKGENGLPGENGAPGPMGPRGAPG 280

Query: 171 PQGIPGDEGKRGPKGDMG 188
            +G PG  G  G +G+ G
Sbjct: 281 ERGRPGLPGAAGARGNDG 298



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 63/155 (40%), Gaps = 30/155 (19%)

Query: 121  KGEIGAKGEMGVKGER------------GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            KGE G  G  G  GER            G  G PG  G PG  G+PG +G  G KGD G 
Sbjct: 951  KGESGKPGPAGHNGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGAPGGKGDRGE 1010

Query: 169  PGPQGIP------------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G  G P                  GD G+ GP G  G PG  G  G  G  G  G  G 
Sbjct: 1011 NGSPGAPGAPGHPGPPGPVGPAGKNGDRGETGPAGPSGAPGPAGSRGPAGPQGPRGDKGE 1070

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G  G  GI G  G PG  G PG+ G  G +G  G
Sbjct: 1071 TGERGSTGIKGHRGFPGNPGAPGSPGPAGHQGAVG 1105



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 30/52 (57%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            P G QGP G KGE G +G  G+KG RG  G PG  G PGP G  G  G  GP
Sbjct: 1058 PAGPQGPRGDKGETGERGSTGIKGHRGFPGNPGAPGSPGPAGHQGAVGSPGP 1109



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 50/131 (38%), Gaps = 36/131 (27%)

Query: 130  MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------------------------- 162
             G  GE G  G PG  G PG  G PG +G RG                            
Sbjct: 978  AGTAGEPGRDGNPGSDGLPGRDGAPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKNGD 1037

Query: 163  KGDMGYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            +G+ G  GP G PG  G RGP         KG+ G  G  G+ G  G PG PG  G PG 
Sbjct: 1038 RGETGPAGPSGAPGPAGSRGPAGPQGPRGDKGETGERGSTGIKGHRGFPGNPGAPGSPGP 1097

Query: 214  NGMDGIPGKDG 224
             G  G  G  G
Sbjct: 1098 AGHQGAVGSPG 1108



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 35/59 (59%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           KG+ G  G +G +G PG  GPPG  G PG+ G +G  G  G PG +G  G  G+RGP G
Sbjct: 603 KGDSGPPGPQGLQGLPGTSGPPGENGKPGEPGPKGESGSPGTPGGKGDSGAPGERGPPG 661



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 34/72 (47%), Gaps = 12/72 (16%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KGD G PGPQG+             G PG  G  G +G PGEPG  G  G  G  G  G 
Sbjct: 603 KGDSGPPGPQGL------------QGLPGTSGPPGENGKPGEPGPKGESGSPGTPGGKGD 650

Query: 223 DGLPGKDGIPGT 234
            G PG+ G PG 
Sbjct: 651 SGAPGERGPPGA 662



 Score = 39.7 bits (91), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 31/59 (52%)

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G PG  G+ G+PG  G PG++G PG  G  GE G  G  G +G SG  G  G P  
Sbjct: 604 GDSGPPGPQGLQGLPGTSGPPGENGKPGEPGPKGESGSPGTPGGKGDSGAPGERGPPGA 662


>gi|410046786|ref|XP_003952259.1| PREDICTED: collagen alpha-1(II) chain [Pan troglodytes]
          Length = 1459

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 787 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 846

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 847 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 906

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 907 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 957

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 958 PGQRGERGFPGLPG 971



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 419 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 478

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 479 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 538

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 539 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 598

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 599 GLRGLPG 605



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 773 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 832

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 833 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 892

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 893 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 952

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 953 GIVGLPG 959



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 347 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 406

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 407 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 466

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 467 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 523

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 524 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 552



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 660 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 719

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 720 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 779

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 780 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 830

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 831 DAGAPGPQGPSGAPG 845



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 722 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 775

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 776 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 832

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 833 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 875



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 686 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 735

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 736 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 793

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 794 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 848



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 494 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 553

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 554 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 610

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 611 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 670

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 671 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 706



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 81/178 (45%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 899  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 951

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 952  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 1009

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG  G  G  GE                   G TG +G+RG++G  G
Sbjct: 1010 GSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1067



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 823  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 882

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 883  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 942

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 943  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1002

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1003 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1033



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 346 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 399

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 400 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 459

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 460 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 519

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 520 PGRPGEPGLPGAR 532



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 659 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 718

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 719 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 778

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 779 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 826



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 655 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 714

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 715 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 774

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 775 KGEVGPPGPAGSAGARGAPG 794



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 256 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 315

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 316 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 375

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 376 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 432

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 433 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 463



 Score = 40.0 bits (92), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 77/188 (40%), Gaps = 48/188 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G +GP G +G  G +G +G+ G+RGE+G PG+   PGP G PG               
Sbjct: 936  PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL---PGPSGEPGK-------------- 978

Query: 171  PQGIPG---------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------ 215
             QG PG           G  G  G  G PGR G  G DG PG  G  G+ G  G      
Sbjct: 979  -QGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVG 1037

Query: 216  ---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                             G  G  G  G  G  G +G  G +G+ GP+G RG  G  G PG
Sbjct: 1038 APGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPG 1097

Query: 261  TPAICAYK 268
               +  ++
Sbjct: 1098 ERGLKGHR 1105



 Score = 39.7 bits (91), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 80/216 (37%), Gaps = 69/216 (31%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            G+ G+ G +G  G +G RG  G PG+ G  G +G PG +G +G  G  G  G  G PG+
Sbjct: 229 AGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGE 288

Query: 178 EGKRGPKGDMGYPGR--------------------------------------------- 192
            G  GP G  G PG                                              
Sbjct: 289 NGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGE 348

Query: 193 ------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------- 236
                  G +G  G  GEPG  G PG  G  G PG DG+PG  G  G  G          
Sbjct: 349 AGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGP 408

Query: 237 --TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
               G +G TGP G +G++      G P I  +K E
Sbjct: 409 RGPPGPQGATGPLGPKGQT------GEPGIAGFKGE 438


>gi|348563737|ref|XP_003467663.1| PREDICTED: collagen alpha-5(IV) chain-like [Cavia porcellus]
          Length = 1605

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 89/170 (52%), Gaps = 20/170 (11%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G+KGE G  G  GV G +G +G PG  G PG  G PG  G  GPKGD G PG  G+ G  
Sbjct: 878  GEKGEPGLPGVPGVSGPKGYQGLPGDPGQPGLSGQPGLPGLPGPKGDPGLPGQPGLIGPT 937

Query: 179  GKRGPKGDMGYPGRIG------------------LDGRDGLPGEPGLDGI--PGRNGMDG 218
            G +G  GDMG+PG  G                  L G+ G  G+PG+ GI  PG  G  G
Sbjct: 938  GLKGNIGDMGFPGPQGVEGLPGPPGVPGQPGSPGLPGQKGDKGDPGISGIGLPGVAGPKG 997

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             PG+ G+PG  GI G+ G  G  G+ G  G +G+ G+ G PGTP +   K
Sbjct: 998  EPGQPGIPGNPGIKGSMGVTGLPGLPGTPGAKGQPGLPGFPGTPGLPGPK 1047



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 83/198 (41%), Gaps = 67/198 (33%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD----EGKRGPKGDMGYPGPQGI 174
           GQKGE G  GE G KG  G  GAPG  G PG +G PGD     G +G KG++G PG  G+
Sbjct: 426 GQKGEKGETGETGSKGLPGIPGAPGAPGLPGTKGEPGDVFTFPGMKGEKGELGAPGAPGL 485

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------------------------- 203
           P            G PG  G DG  GLPG                               
Sbjct: 486 P------------GLPGTPGQDGLPGLPGPKGEPGGIVFKGERGPPGNPGLPGLPGNMGP 533

Query: 204 -------------EPGLDGIPGRNGMDGIPGKDG-------LPGKDGIPGTNGTNGEKGM 243
                        E G+ G+ G  G  G+PG  G        PGK G+PG  G +GE G+
Sbjct: 534 MGPVGFGPPGPVGEKGIQGVAGNPGQPGMPGPKGDPGQTITQPGKPGLPGNRGRDGEVGL 593

Query: 244 TGPRGNRGKSGINGVPGT 261
            G  G  G+ G+ G+PG+
Sbjct: 594 PGDPGLPGQPGVPGIPGS 611



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 74/151 (49%), Gaps = 37/151 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKR--------------- 160
           G+KGE+GA G  G+ G  G  G  G+ G PGP+G PG    +G+R               
Sbjct: 472 GEKGELGAPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIVFKGERGPPGNPGLPGLPGNM 531

Query: 161 -----------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
                      GP G+ G  G  G PG  G  GPKGD   PG+         PG+PGL G
Sbjct: 532 GPMGPVGFGPPGPVGEKGIQGVAGNPGQPGMPGPKGD---PGQTITQ-----PGKPGLPG 583

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
             GR+G  G+PG  GLPG+ G+PG  G+ GE
Sbjct: 584 NRGRDGEVGLPGDPGLPGQPGVPGIPGSKGE 614



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 85/208 (40%), Gaps = 66/208 (31%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDM--------- 166
           G+KGE G  G+ G  G+ GE G PG+ G PG  G PG+ GK   +G KGD+         
Sbjct: 286 GEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDTGYPGEPGKDGEKGQKGDIGPPGPPGFV 345

Query: 167 ----------GYPGPQGIPGDEGKRGPKGDMGYPG----------------------RIG 194
                     G  G  G+PG  G+   KG+ G+PG                        G
Sbjct: 346 IPRPGTGITIGEKGNIGLPGLPGE---KGERGFPGIQGPPGLPGLPGDKGDTCFNCIGTG 402

Query: 195 LDGR---------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           + G                 G PG+ G  G  G  G  G+PG  G PG  G+PGT G  G
Sbjct: 403 ISGHPGRPGLPGVPGPPGSLGFPGQKGEKGETGETGSKGLPGIPGAPGAPGLPGTKGEPG 462

Query: 240 E----KGMTGPRGNRGKSGINGVPGTPA 263
           +     GM G +G  G  G  G+PG P 
Sbjct: 463 DVFTFPGMKGEKGELGAPGAPGLPGLPG 490



 Score = 39.7 bits (91), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 59/131 (45%), Gaps = 42/131 (32%)

Query: 112 PGLQGPIGQKGEIGAKGE-----------------------MGVKGERGEKGAPGVVGPP 148
           PGL GP G+ G I  KGE                        G  G  GEKG  GV G P
Sbjct: 498 PGLPGPKGEPGGIVFKGERGPPGNPGLPGLPGNMGPMGPVGFGPPGPVGEKGIQGVAGNP 557

Query: 149 GPQGIPGDEGKRGPKGDMG----YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           G  G+P      GPKGD G     PG  G+PG+ G+          G +GL G  GLPG+
Sbjct: 558 GQPGMP------GPKGDPGQTITQPGKPGLPGNRGRD---------GEVGLPGDPGLPGQ 602

Query: 205 PGLDGIPGRNG 215
           PG+ GIPG  G
Sbjct: 603 PGVPGIPGSKG 613



 Score = 39.7 bits (91), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 81/202 (40%), Gaps = 85/202 (42%)

Query: 113  GLQGPIGQKGE--------IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            G+ GP GQKGE         G  G  G+ G++G+ G P         GIPG+ G  GPKG
Sbjct: 1087 GIPGPAGQKGEPGHPGFGIPGPPGLPGLSGQKGDGGLP---------GIPGNPGLPGPKG 1137

Query: 165  DMGY-----------------------------------------------PGPQGIPGD 177
            + G+                                                GP+G+PG+
Sbjct: 1138 EPGFQGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGPPGYQGLPGPEGPRGLPGN 1197

Query: 178  EGKRGP---------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G +G                KGD G PG +      G PG PGL+G+ G  G+ G+PG 
Sbjct: 1198 GGIKGERGNPGPPGPPGFPGSKGDQGSPGLL------GNPGRPGLNGMKGDPGLPGVPGF 1251

Query: 223  DGLPGKDGIPGTNGTNGEKGMT 244
             GL G  G+PG+ G  GE G+T
Sbjct: 1252 PGLKGPIGVPGSTGPEGEPGLT 1273


>gi|306922621|gb|ADN07500.1| collagen, type VII, alpha 1 [Microtus ochrogaster]
          Length = 2189

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 92/183 (50%), Gaps = 33/183 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEM-----------GVKGERGEKGAPGVVGPPGPQ---GIPGDE 157
            PG QGP G+ GE G KG+            G  GE G +GAPGV GP G +   G PG+ 
Sbjct: 1430 PGPQGPAGRTGEKGEKGDCEDGSPGLPGQPGAPGEPGLRGAPGVTGPKGDRGQTGTPGEP 1489

Query: 158  GKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPG--RIGLDGRDG 200
            G++G +G  G  GPQG+PG  G               +RG KG+ G PG   +G DG  G
Sbjct: 1490 GEKGERGPPGAVGPQGLPGVAGHPGVEGPEGPPGPAGRRGEKGEPGRPGDPAVGPDG-PG 1548

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            + GE G  G+PG  G  G  G+ G PG   +PG  G  G+ G  GP G  G++G  G  G
Sbjct: 1549 VKGEKGDAGLPGPRGASGTKGEQGPPGL-ALPGDPGPKGDPGDRGPIGLTGRAGPTGDSG 1607

Query: 261  TPA 263
             P 
Sbjct: 1608 PPG 1610



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 93/208 (44%), Gaps = 62/208 (29%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGP------ 162
            PGL G  G++G  GA G  G  GE+GE+G PG     G PGP G  GD G+ GP      
Sbjct: 1645 PGLPGKAGERGPRGAPGARGPVGEKGEQGDPGEDGRNGSPGPSGPKGDRGEPGPPGPPGR 1704

Query: 163  -----KGDMGYPGPQ---------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                  GD G PG +               G  GD G RGP GD G  G  GLDGR+GL 
Sbjct: 1705 PVGIGSGDKGEPGQEGPRGPKGDPGPPGASGERGDPGVRGPAGDKGDRGPPGLDGRNGLD 1764

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGI------------------------------P 232
            G+PG  G PG +G  G   K G PG+DG+                              P
Sbjct: 1765 GKPGALGPPGPHGASG---KAGDPGRDGLPGLRGEHGPTGQPGPPGPPGVPGKAGEDGKP 1821

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G NG NGE G  G  G +G+ G +G PG
Sbjct: 1822 GLNGKNGEPGDPGEDGRKGEKGDSGAPG 1849



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 91/223 (40%), Gaps = 84/223 (37%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG---------------------------------E 138
            PG+ GP G +G+ G  GE G KGERG                                 E
Sbjct: 1471 PGVTGPKGDRGQTGTPGEPGEKGERGPPGAVGPQGLPGVAGHPGVEGPEGPPGPAGRRGE 1530

Query: 139  KGAPG-----VVGP--------------PGPQGIPGDEGKRGPKGDM--GYPGPQGIPGD 177
            KG PG      VGP              PGP+G  G +G++GP G    G PGP+G PGD
Sbjct: 1531 KGEPGRPGDPAVGPDGPGVKGEKGDAGLPGPRGASGTKGEQGPPGLALPGDPGPKGDPGD 1590

Query: 178  EG------KRGPKGDMGYPGR---------------------IGLDGRDGLPGEPGLDGI 210
             G      + GP GD G PG                       G  G +G PG+PGL G 
Sbjct: 1591 RGPIGLTGRAGPTGDSGPPGEKGDPGRPGPPGPVGPRGRDGEAGEKGDEGTPGDPGLPGK 1650

Query: 211  PGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNR 250
             G  G  G PG     G  G+ G PG +G NG  G +GP+G+R
Sbjct: 1651 AGERGPRGAPGARGPVGEKGEQGDPGEDGRNGSPGPSGPKGDR 1693



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 93/232 (40%), Gaps = 71/232 (30%)

Query: 101  GFCNSTKEYCP---PGLQGPIGQKGEIGAKGE---------MGVKGER------------ 136
            G      E  P   PG +GP+G+KGE G  GE          G KG+R            
Sbjct: 1646 GLPGKAGERGPRGAPGARGPVGEKGEQGDPGEDGRNGSPGPSGPKGDRGEPGPPGPPGRP 1705

Query: 137  -----GEKGAPGV------------------VGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
                 G+KG PG                    G PG +G  GD+G RGP G  G     G
Sbjct: 1706 VGIGSGDKGEPGQEGPRGPKGDPGPPGASGERGDPGVRGPAGDKGDRGPPGLDGR---NG 1762

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------LDGIPG 212
            + G  G  GP G  G  G+ G  GRDGLPG  G                      DG PG
Sbjct: 1763 LDGKPGALGPPGPHGASGKAGDPGRDGLPGLRGEHGPTGQPGPPGPPGVPGKAGEDGKPG 1822

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             NG +G PG  G  G+ G  G +G  G +G  GP+G RG  G  G+ G P +
Sbjct: 1823 LNGKNGEPGDPGEDGRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGL 1874



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 66/146 (45%), Gaps = 38/146 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----------------------VGPP 148
            PGL GP G  GE G  GE G +GE+G++G  G                         GP 
Sbjct: 2025 PGLPGPAGGVGEAGRPGERGERGEKGDRGEQGRDGLPGLPGPPGPPGPKVAVEDPGTGPS 2084

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              QG PG +G +G             PG +G RGPKGD G P   G+ G  G PG+ G D
Sbjct: 2085 REQGPPGLKGAKG------------EPGSDGDRGPKGDRGVP---GIKGDQGEPGKRGHD 2129

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGT 234
            G PG  G  G+ G +G PG  G  GT
Sbjct: 2130 GSPGLPGERGVAGPEGKPGLQGPRGT 2155



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 86/236 (36%), Gaps = 83/236 (35%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G      E   PG  G  G+KG+ GA G  G  G +GE+GAPG  G  GP G+PG  G  
Sbjct: 1822 GLNGKNGEPGDPGEDGRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQVGPP 1881

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG----------------------- 197
            G +G  G PG  G  GD G+ G KG+ G PG  GL G                       
Sbjct: 1882 G-QGFPGVPGSVGPKGDRGETGSKGEQGLPGERGLRGEPGSLPNAERLLETAGIKVSALR 1940

Query: 198  -------------------RDGLPGEPGLDGIPGRNGMDGIPG----------------- 221
                               R G  G+PG  G PG+ G  G PG                 
Sbjct: 1941 DIVETWDESSGGFLSVPERRPGPKGDPGERGPPGKEGSIGFPGERGLKGDRGDPGPQGPP 2000

Query: 222  --------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                                K G+P   G+PG  G  GE G  G RG RG+ G  G
Sbjct: 2001 GLALGERGPPGPPGLAGEPGKPGIP---GLPGPAGGVGEAGRPGERGERGEKGDRG 2053



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 92/216 (42%), Gaps = 72/216 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGY 168
            PGL G   + GE G  GE G KGE+G+ GAPG  GP GP+G    PG+ G +GP G  G 
Sbjct: 1821 PGLNG---KNGEPGDPGEDGRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQ 1877

Query: 169  PGP--QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG-------------- 212
             GP  QG PG  G  GPKGD G     G  G  GLPGE GL G PG              
Sbjct: 1878 VGPPGQGFPGVPGSVGPKGDRG---ETGSKGEQGLPGERGLRGEPGSLPNAERLLETAGI 1934

Query: 213  -------------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                                     R G  G PG+ G PGK+G   + G  GE+G+ G R
Sbjct: 1935 KVSALRDIVETWDESSGGFLSVPERRPGPKGDPGERGPPGKEG---SIGFPGERGLKGDR 1991

Query: 248  GNRGKSGINGV-------------------PGTPAI 264
            G+ G  G  G+                   PG P +
Sbjct: 1992 GDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGL 2027



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 56/119 (47%), Gaps = 25/119 (21%)

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G PGPQG  G  G++G KGD    G  GL G+ G PGEPGL G PG  G  G  G+ G P
Sbjct: 1428 GSPGPQGPAGRTGEKGEKGDC-EDGSPGLPGQPGAPGEPGLRGAPGVTGPKGDRGQTGTP 1486

Query: 227  GKDGIPGTNGTNGEKGMTGPRG---------------------NRGKSGINGVPGTPAI 264
            G+   PG  G  G  G  GP+G                      RG+ G  G PG PA+
Sbjct: 1487 GE---PGEKGERGPPGAVGPQGLPGVAGHPGVEGPEGPPGPAGRRGEKGEPGRPGDPAV 1542



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 92/268 (34%), Gaps = 122/268 (45%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------------ 147
            PG  GP G +GE G+KGE G+ GERG +G PG + P                        
Sbjct: 1889 PGSVGPKGDRGETGSKGEQGLPGERGLRGEPGSL-PNAERLLETAGIKVSALRDIVETWD 1947

Query: 148  -------------PGPQGIPGDEGKRGPKGDMGYPGPQGI-------------------- 174
                         PGP+G PG+ G  G +G +G+PG +G+                    
Sbjct: 1948 ESSGGFLSVPERRPGPKGDPGERGPPGKEGSIGFPGERGLKGDRGDPGPQGPPGLALGER 2007

Query: 175  --------------------------------PGDEGKRGPKGDMGYPGR---------- 192
                                            PG+ G+RG KGD G  GR          
Sbjct: 2008 GPPGPPGLAGEPGKPGIPGLPGPAGGVGEAGRPGERGERGEKGDRGEQGRDGLPGLPGPP 2067

Query: 193  -------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDG 230
                                G  G  G  GEPG DG  G  G  G+P   G  G PGK G
Sbjct: 2068 GPPGPKVAVEDPGTGPSREQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDQGEPGKRG 2127

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGV 258
              G+ G  GE+G+ GP G  G  G  G 
Sbjct: 2128 HDGSPGLPGERGVAGPEGKPGLQGPRGT 2155



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG  G+PG  G +GP G  G  G  G D  DG PG      +PG+ G  G PG  G PG 
Sbjct: 1421 PGLPGLPGSPGPQGPAGRTGEKGEKG-DCEDGSPG------LPGQPGAPGEPGLRGAPGV 1473

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             G  G  G  G  G  G +G RG  G  G  G P +  +
Sbjct: 1474 TGPKGDRGQTGTPGEPGEKGERGPPGAVGPQGLPGVAGH 1512



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 12/83 (14%)

Query: 106  TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            ++E  PPGL+         GAKGE G  G+RG KG  GV   PG +G  G+ GKRG  G 
Sbjct: 2084 SREQGPPGLK---------GAKGEPGSDGDRGPKGDRGV---PGIKGDQGEPGKRGHDGS 2131

Query: 166  MGYPGPQGIPGDEGKRGPKGDMG 188
             G PG +G+ G EGK G +G  G
Sbjct: 2132 PGLPGERGVAGPEGKPGLQGPRG 2154


>gi|115528857|gb|AAI25032.1| Col17a1 protein [Mus musculus]
 gi|115528995|gb|AAI25033.1| Col17a1 protein [Mus musculus]
          Length = 1470

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 86/200 (43%), Gaps = 59/200 (29%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG- 179
           +G  G KG+MG +G +G++G PG  G PGP G PG EG +G KG +G PG +G  G  G 
Sbjct: 573 RGSPGPKGDMGSQGPKGDRGLPGTPGIPGPLGHPGPEGPKGQKGSIGDPGMEGPIGQRGL 632

Query: 180 -------------KRGPKGDMGYPGR---------------------------------I 193
                          G KGD G  G                                   
Sbjct: 633 AGPMGPRGEPGPPGSGEKGDRGIAGEQGPQGLPGVPGPPGLRGHSGSPGPQGPPGAVGPQ 692

Query: 194 GLDGRDGLP---GEPGLDGIPGRN---------GMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GL G  GLP   G+ GL G PG           G+ G PG  GLPG  G PG  G  G  
Sbjct: 693 GLRGDVGLPGVKGDKGLMGPPGPKGDQGEKGPRGLTGEPGIRGLPGAVGEPGAKGAMGPA 752

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G  G +G+RG+ G+ G+PGT
Sbjct: 753 GADGQQGSRGEQGLTGMPGT 772



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 86/199 (43%), Gaps = 74/199 (37%)

Query: 112 PGLQGPIGQKG--------------EIGAKGEMGVKGE---------------------- 135
           PG++GPIGQ+G                G KG+ G+ GE                      
Sbjct: 621 PGMEGPIGQRGLAGPMGPRGEPGPPGSGEKGDRGIAGEQGPQGLPGVPGPPGLRGHSGSP 680

Query: 136 --------------RGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
                         RG+ G PGV      +GPPGP+   GD+G++GP+G  G PG +G+P
Sbjct: 681 GPQGPPGAVGPQGLRGDVGLPGVKGDKGLMGPPGPK---GDQGEKGPRGLTGEPGIRGLP 737

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------------GMDGIPGKD 223
           G  G+ G KG M   G  G DG+ G  GE GL G+PG              G+ G  G  
Sbjct: 738 GAVGEPGAKGAM---GPAGADGQQGSRGEQGLTGMPGTRGPPGPAGDPGKPGLTGPQGPQ 794

Query: 224 GLPGKDGIPGTNGTNGEKG 242
           GLPG  G PGT G  G  G
Sbjct: 795 GLPGSPGRPGTKGEPGAPG 813


>gi|449507446|ref|XP_002191994.2| PREDICTED: collagen alpha-2(V) chain [Taeniopygia guttata]
          Length = 1496

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 91/167 (54%), Gaps = 18/167 (10%)

Query: 112 PGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG +G  G KGE G +G       +G +G+RG +G PG VGPPGP G  G  G RG  G 
Sbjct: 475 PGFKGEAGPKGEPGPQGPQGPIGPIGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGS 534

Query: 166 MGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G  G+ G  G 
Sbjct: 535 DGLPGPKGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGA 594

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
           PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 595 PGEDGRPGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 641



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 89/196 (45%), Gaps = 39/196 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------- 158
           PG  G  G KGE G  G  G +G +G++G  G  GP G QG+PG EG             
Sbjct: 379 PGFPGIPGIKGEAGPTGPRGPEGPQGQRGETGPQGPAGSQGLPGAEGTDGSPGAKGPTGS 438

Query: 159 --------------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------ 192
                                 GP G  G PG  G+PG +G+ GPKG+ G  G       
Sbjct: 439 PGTGGPPGLSGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPQGPQGPIGP 498

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
           IG +G+ G  G+PG  G PG  G  G PG  G PG DG+PG  G  GE+G  G  G +G 
Sbjct: 499 IGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPAGSSGPKGG 558

Query: 253 SGINGVPGTPAICAYK 268
            G  G PG P +   +
Sbjct: 559 QGDPGRPGEPGLPGAR 574



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 85/177 (48%), Gaps = 30/177 (16%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG------EMGVKGERGEKGAPGVVGPPG 149
           +   +G      E  P G QGPIG  GE G +G       +G  G  GE+GAPG  G PG
Sbjct: 474 VPGFKGEAGPKGEPGPQGPQGPIGPIGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPG 533

Query: 150 PQGIPGD---EGKRGP---------KGDMGYPGPQGIPG------------DEGKRGPKG 185
             G+PG    +G+RGP         +GD G PG  G+PG             EGK GP G
Sbjct: 534 SDGLPGPKGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLG 593

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             G  GR G  G  G+ G+PG  G+PG  G  G PGK G  G  G+PG  G  G+ G
Sbjct: 594 APGEDGRPGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDG 650



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 89/199 (44%), Gaps = 42/199 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP G   P G P
Sbjct: 536 GLPGPKGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 595

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDG-- 209
           G++G+ GP G +G    +G PG  G  GPKG  G PG+ G  G  G+PG+   PG DG  
Sbjct: 596 GEDGRPGPAGSIGI---RGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEV 652

Query: 210 ----------IPGRNGMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                     + G  G  G PG                       G+PG  G  G  G  
Sbjct: 653 GPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPR 712

Query: 239 GEKGMTGPRGNRGKSGING 257
           GE+G  G RG  G SGI G
Sbjct: 713 GERGNPGERGEPGASGIQG 731



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 75/150 (50%), Gaps = 21/150 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL+G  G KG  G KGE+G  G +GE G  G +GP GP G                  P
Sbjct: 298 PGLKGHRGLKGLDGPKGEIGAAGAKGESGPTGAMGPTGPLG------------------P 339

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G+PG+ G+ GP+   G PG  G  G  G PG  G  GI G  G  GIPG  G  G  G 
Sbjct: 340 RGMPGERGRIGPQ---GAPGGRGQHGMPGKPGPMGPLGITGSPGFPGIPGIKGEAGPTGP 396

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G++G TGP+G  G  G+ G  GT
Sbjct: 397 RGPEGPQGQRGETGPQGPAGSQGLPGAEGT 426



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 70/139 (50%), Gaps = 9/139 (6%)

Query: 128 GEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           GE G  G+ GE G PG  GP   PG  G+PG +G RG KG  G  G  G  G +G+ GP 
Sbjct: 269 GEPGRPGQSGEPGFPGSPGPRGFPGAPGLPGLKGHRGLKGLDGPKGEIGAAGAKGESGPT 328

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDGIPGTNGTN 238
           G MG  G +G  G  G  G  G  G PG  G  G+PGK G      + G  G PG  G  
Sbjct: 329 GAMGPTGPLGPRGMPGERGRIGPQGAPGGRGQHGMPGKPGPMGPLGITGSPGFPGIPGIK 388

Query: 239 GEKGMTGPRGNRGKSGING 257
           GE G TGPRG  G  G  G
Sbjct: 389 GEAGPTGPRGPEGPQGQRG 407



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 82/193 (42%), Gaps = 57/193 (29%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----- 167
           GL+G  G KGEIGA    G KGE G  GA G  GP GP+G+PG+ G+ GP+G  G     
Sbjct: 305 GLKGLDGPKGEIGA---AGAKGESGPTGAMGPTGPLGPRGMPGERGRIGPQGAPGGRGQH 361

Query: 168 ----YPGPQG------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                PGP G            IPG +G+ GP G  G  G  G  G  G  G  G  G+P
Sbjct: 362 GMPGKPGPMGPLGITGSPGFPGIPGIKGEAGPTGPRGPEGPQGQRGETGPQGPAGSQGLP 421

Query: 212 GRNGMDGIPGKD---------------------------------GLPGKDGIPGTNGTN 238
           G  G DG PG                                   G PG  G+PG  G  
Sbjct: 422 GAEGTDGSPGAKGPTGSPGTGGPPGLSGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEA 481

Query: 239 GEKGMTGPRGNRG 251
           G KG  GP+G +G
Sbjct: 482 GPKGEPGPQGPQG 494



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 73/149 (48%), Gaps = 18/149 (12%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGD------------EGKRGPKGDMGYP------GPQ 172
           G  G  G+ G PG  G PGP+G PG             +G  GPKG++G        GP 
Sbjct: 269 GEPGRPGQSGEPGFPGSPGPRGFPGAPGLPGLKGHRGLKGLDGPKGEIGAAGAKGESGPT 328

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G  G  GP+G  G  GRIG  G  G  G+ G+ G PG  G  GI G  G PG  GI 
Sbjct: 329 GAMGPTGPLGPRGMPGERGRIGPQGAPGGRGQHGMPGKPGPMGPLGITGSPGFPGIPGIK 388

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G  GP+G RG++G  G  G+
Sbjct: 389 GEAGPTGPRGPEGPQGQRGETGPQGPAGS 417



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 94/224 (41%), Gaps = 72/224 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 580 PGVQGPEGKLGPLGAPGEDGRPGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 639

Query: 169 PGPQGIPG------------------DEGKRGPKG---------------------DMGY 189
           PG +G PG                  + G++GP G                     D G 
Sbjct: 640 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 699

Query: 190 PG------RIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDG---------------- 224
           PG       +G  G  G PGE   PG  GI G  GM G  G DG                
Sbjct: 700 PGDPGAVGPLGPRGERGNPGERGEPGASGIQGEKGMAGGHGPDGPKGSPGPSGTPGDPGP 759

Query: 225 -----LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                +PG+ GI GT G  G++G  G +G  G +G +G  G P 
Sbjct: 760 PGLQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPG 803



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 3/113 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G +G +G KG  G  G  G +G PG +GP GP G  G++G+ GP+G +G PG +
Sbjct: 773 GTPGPKGDRGGVGEKGAEGTAGNDGARGLPGPIGPMGPAGPTGEKGEPGPRGLVGPPGSR 832

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           G PG  G+ GP G +G+ G  G DG+ G+ GEPG    PG+ G  G PG  GL
Sbjct: 833 GNPGSRGENGPTGAVGFAGPPGPDGQPGVKGEPGE---PGQKGDAGSPGPQGL 882



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 73/154 (47%), Gaps = 24/154 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----- 167
           G+ G  G  G +G +GE G  GERGE GA G+ G    +G+ G  G  GPKG  G     
Sbjct: 698 GVPGDPGAVGPLGPRGERGNPGERGEPGASGIQGE---KGMAGGHGPDGPKGSPGPSGTP 754

Query: 168 ----------YPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                      PG +GI   PG +G RG  G+ G  G  G DG  GLPG  G  G  G  
Sbjct: 755 GDPGPPGLQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGPIGPMGPAGPT 814

Query: 215 GMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
           G  G PG  GL   PG  G PG+ G NG  G  G
Sbjct: 815 GEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVG 848



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 65/142 (45%), Gaps = 12/142 (8%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GE G PG  G PG    PG  G RG      +PG  G+PG +G RG KG  G  G IG  
Sbjct: 269 GEPGRPGQSGEPG---FPGSPGPRG------FPGAPGLPGLKGHRGLKGLDGPKGEIGAA 319

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G  G  G  G  G  G  G+PG+ G  G  G PG  G +G  G  GP    G  GI 
Sbjct: 320 GAKGESGPTGAMGPTGPLGPRGMPGERGRIGPQGAPGGRGQHGMPGKPGP---MGPLGIT 376

Query: 257 GVPGTPAICAYKRESCSLLPNS 278
           G PG P I   K E+    P  
Sbjct: 377 GSPGFPGIPGIKGEAGPTGPRG 398



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 67/142 (47%), Gaps = 15/142 (10%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD-------- 186
           ++G  G PG VGP GP+G  G+ G+RG  G  G  G +G+ G  G  GPKG         
Sbjct: 696 DQGVPGDPGAVGPLGPRGERGNPGERGEPGASGIQGEKGMAGGHGPDGPKGSPGPSGTPG 755

Query: 187 -------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
                   G PG  G+ G  G  G+ G  G  G  G  G  G  GLPG  G  G  G  G
Sbjct: 756 DPGPPGLQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGPIGPMGPAGPTG 815

Query: 240 EKGMTGPRGNRGKSGINGVPGT 261
           EKG  GPRG  G  G  G PG+
Sbjct: 816 EKGEPGPRGLVGPPGSRGNPGS 837



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 87/214 (40%), Gaps = 72/214 (33%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP------GPQ 172
            G  G IG  G  G  GE+GE G  G+VGPPG +G PG  G+ GP G +G+       G  
Sbjct: 800  GLPGPIGPMGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPPGPDGQP 859

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRD---------------GLPGEPGLDGIPGRNGMD 217
            G+ G+ G+ G KGD G PG  GL G                 G  G PG  G PG  G  
Sbjct: 860  GVKGEPGEPGQKGDAGSPGPQGLAGSHGPPGPPGVPGLKGGRGTQGPPGATGFPGSAGRV 919

Query: 218  ---------------GIPGKDGLPGKDGIPGTN--------------------------- 235
                           G PGK+G PG  G PG++                           
Sbjct: 920  GPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPTGPPGGPGDKGDPGDDGQP 979

Query: 236  ---------GTNGEKGMTGPRGNRGKSGINGVPG 260
                     GT G++G+ G  G RG+ G+ G+PG
Sbjct: 980  GPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPG 1013



 Score = 39.7 bits (91), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 32/51 (62%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
             GQ+GE G++G MG  G  G++G PG  GP G +G  GD G RG KG  G+
Sbjct: 1099 AGQRGETGSRGPMGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1149


>gi|402885768|ref|XP_003906318.1| PREDICTED: collagen alpha-1(II) chain isoform 1 [Papio anubis]
          Length = 1487

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 92/198 (46%), Gaps = 33/198 (16%)

Query: 97   VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
               +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 815  AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 874

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
            QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 875  QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 934

Query: 187  MGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G PGR    GL G  G PGE G  G  G +G DG PG  GL G+ GI G  G  GE+G 
Sbjct: 935  SGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 994

Query: 244  TGPRGNRGKSGINGVPGT 261
             G  G  G+ G  G PG 
Sbjct: 995  PGLPGPSGEPGKQGAPGA 1012



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 447 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 506

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 507 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 566

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 567 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 626

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 627 GLRGLPG 633



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 84/187 (44%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 860

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 920

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ 
Sbjct: 921 GPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQR 980

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 981 GIVGLPG 987



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 434

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 435 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 494

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 495 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 551

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 552 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 580



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGASGPAGPPGAQGPPG 747

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 808 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 858

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 859 DAGAPGPQGPSGAPG 873



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 750 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 804 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 860

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 88/213 (41%), Gaps = 57/213 (26%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 851  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 910

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 911  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGP 970

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 971  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1030

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                 ++G PG +G  G  G  G +G+RG++G 
Sbjct: 1031 AGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 1063



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 638

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 698

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 699 GERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGAS 734



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 67/141 (47%), Gaps = 27/141 (19%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------- 181
           ++G  GE+GA G+ GP            +G +GD+G  GP+G PG +G R          
Sbjct: 748 LQGMPGERGAAGIAGP------------KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPG 795

Query: 182 -----GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                G KG++G PG  G  G  G PGE G  G PG  G  G PG DG PG  G  G  G
Sbjct: 796 PAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAG 855

Query: 237 TNGEKGMTGPRGNRGKSGING 257
             G+ G  GP+G  G  G  G
Sbjct: 856 QKGDAGAPGPQGPSGAPGPQG 876



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 85/199 (42%), Gaps = 30/199 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            PG  G  G +G PG+ G+ GP G  G+ GP G  G  G +G +G+ G  G  G  G  G
Sbjct: 808 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 867

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------------TNGEKGMTG 245
             G PG  G  G  G  G  G  G PG  G PG  G                 G  G  G
Sbjct: 868 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDG 927

Query: 246 PRGNRGKSGINGVPGTPAI 264
           P+G RG SG  G  G P +
Sbjct: 928 PKGARGDSGPPGRAGDPGL 946



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 374 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 427

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 428 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 487

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 488 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 547

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 548 PGRPGEPGLPGAR 560



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 83/208 (39%), Gaps = 69/208 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
            PGLQGP G  GE         KGE G+ G  G  GPPGPQG+ G  G      +RG +G 
Sbjct: 944  PGLQGPAGPPGE---------KGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 994

Query: 166  MGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGI 210
             G PGP G PG +G  G  GD                G PGR G          PG DG 
Sbjct: 995  PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADGP 1045

Query: 211  PGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTNGE 240
            PGR+G  G+                               G  G  G  G  G +G  G 
Sbjct: 1046 PGRDGAAGVKGDRGETGAVGAPGSPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGA 1105

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1106 RGIQGPQGPRGDKGEAGEPGERGLKGHR 1133



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 83/168 (49%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  G +G+PG  G  GPKG              
Sbjct: 687 GEAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGASGPAGPPGAQGPP 746

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 747 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 806

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 807 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 854



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 90/226 (39%), Gaps = 84/226 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+             G +G+ 
Sbjct: 597 GQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQ 656

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QG+PG+ G  G   P+G+ G+PG        GL 
Sbjct: 657 GAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGSQGLQ 716

Query: 197 GRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GKD 223
           G  GLPG PG D                     G+PG  G  GI             G +
Sbjct: 717 GARGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 776

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 777 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 822



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 284 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 343

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 403

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 404 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 460

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 461 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 491



 Score = 39.3 bits (90), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 71/173 (41%), Gaps = 39/173 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPG------------ 155
            P G  GP G +G  G +G +G+ G+RGE+G PG+ GP   PG QG PG            
Sbjct: 964  PSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVG 1023

Query: 156  ---DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------------------- 193
                 G  G  G  G PG  G PG +G  G KGD G  G +                   
Sbjct: 1024 PPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGSPGPPGSPGPAGPTG 1083

Query: 194  --GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
              G  G  G  G  G  G  G  G+ G  G  G  G+ G PG  G  G +G T
Sbjct: 1084 KQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFT 1136


>gi|306922629|gb|ADN07507.1| collagen, type VII, alpha 1 [Microtus ochrogaster]
          Length = 2189

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 92/183 (50%), Gaps = 33/183 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEM-----------GVKGERGEKGAPGVVGPPGPQ---GIPGDE 157
            PG QGP G+ GE G KG+            G  GE G +GAPGV GP G +   G PG+ 
Sbjct: 1430 PGPQGPAGRTGEKGEKGDCEDGSPGLPGQPGAPGEPGLRGAPGVTGPKGDRGQTGTPGEP 1489

Query: 158  GKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPG--RIGLDGRDG 200
            G++G +G  G  GPQG+PG  G               +RG KG+ G PG   +G DG  G
Sbjct: 1490 GEKGERGPPGAVGPQGLPGVAGHPGVEGPEGPPGPAGRRGEKGEPGRPGDPAVGPDG-PG 1548

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            + GE G  G+PG  G  G  G+ G PG   +PG  G  G+ G  GP G  G++G  G  G
Sbjct: 1549 VKGEKGDAGLPGPRGASGTKGEQGPPGL-ALPGDPGPKGDPGDRGPIGLTGRAGPTGDSG 1607

Query: 261  TPA 263
             P 
Sbjct: 1608 PPG 1610



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 93/208 (44%), Gaps = 62/208 (29%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGP------ 162
            PGL G  G++G  GA G  G  GE+GE+G PG     G PGP G  GD G+ GP      
Sbjct: 1645 PGLPGKAGERGPRGAPGARGPVGEKGEQGDPGEDGRNGSPGPSGPKGDRGEPGPPGPPGR 1704

Query: 163  -----KGDMGYPGPQ---------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                  GD G PG +               G  GD G RGP GD G  G  GLDGR+GL 
Sbjct: 1705 PVGIGSGDKGEPGQEGPRGPKGDPGPPGASGERGDPGVRGPAGDKGDRGPPGLDGRNGLD 1764

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGI------------------------------P 232
            G+PG  G PG +G  G   K G PG+DG+                              P
Sbjct: 1765 GKPGALGPPGPHGASG---KAGDPGRDGLPGLRGEHGPTGQPGPPGPPGVPGKAGEDGKP 1821

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G NG NGE G  G  G +G+ G +G PG
Sbjct: 1822 GLNGKNGEPGDPGEDGRKGEKGDSGAPG 1849



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 91/223 (40%), Gaps = 84/223 (37%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG---------------------------------E 138
            PG+ GP G +G+ G  GE G KGERG                                 E
Sbjct: 1471 PGVTGPKGDRGQTGTPGEPGEKGERGPPGAVGPQGLPGVAGHPGVEGPEGPPGPAGRRGE 1530

Query: 139  KGAPG-----VVGP--------------PGPQGIPGDEGKRGPKGDM--GYPGPQGIPGD 177
            KG PG      VGP              PGP+G  G +G++GP G    G PGP+G PGD
Sbjct: 1531 KGEPGRPGDPAVGPDGPGVKGEKGDAGLPGPRGASGTKGEQGPPGLALPGDPGPKGDPGD 1590

Query: 178  EG------KRGPKGDMGYPGR---------------------IGLDGRDGLPGEPGLDGI 210
             G      + GP GD G PG                       G  G +G PG+PGL G 
Sbjct: 1591 RGPIGLTGRAGPTGDSGPPGEKGDPGRPGPPGPVGPRGRDGEAGEKGDEGTPGDPGLPGK 1650

Query: 211  PGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNR 250
             G  G  G PG     G  G+ G PG +G NG  G +GP+G+R
Sbjct: 1651 AGERGPRGAPGARGPVGEKGEQGDPGEDGRNGSPGPSGPKGDR 1693



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 93/232 (40%), Gaps = 71/232 (30%)

Query: 101  GFCNSTKEYCP---PGLQGPIGQKGEIGAKGE---------MGVKGER------------ 136
            G      E  P   PG +GP+G+KGE G  GE          G KG+R            
Sbjct: 1646 GLPGKAGERGPRGAPGARGPVGEKGEQGDPGEDGRNGSPGPSGPKGDRGEPGPPGPPGRP 1705

Query: 137  -----GEKGAPGV------------------VGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
                 G+KG PG                    G PG +G  GD+G RGP G  G     G
Sbjct: 1706 VGIGSGDKGEPGQEGPRGPKGDPGPPGASGERGDPGVRGPAGDKGDRGPPGLDGR---NG 1762

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------LDGIPG 212
            + G  G  GP G  G  G+ G  GRDGLPG  G                      DG PG
Sbjct: 1763 LDGKPGALGPPGPHGASGKAGDPGRDGLPGLRGEHGPTGQPGPPGPPGVPGKAGEDGKPG 1822

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             NG +G PG  G  G+ G  G +G  G +G  GP+G RG  G  G+ G P +
Sbjct: 1823 LNGKNGEPGDPGEDGRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGL 1874



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 66/146 (45%), Gaps = 38/146 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----------------------VGPP 148
            PGL GP G  GE G  GE G +GE+G++G  G                         GP 
Sbjct: 2025 PGLPGPAGGVGEAGRPGERGERGEKGDRGEQGRDGLPGLPGPPGPPGPKVAVEDPGTGPS 2084

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              QG PG +G +G             PG +G RGPKGD G P   G+ G  G PG+ G D
Sbjct: 2085 REQGPPGLKGAKG------------EPGSDGDRGPKGDRGVP---GIKGDQGEPGKRGHD 2129

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGT 234
            G PG  G  G+ G +G PG  G  GT
Sbjct: 2130 GSPGLPGERGVAGPEGKPGLQGPRGT 2155



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 86/236 (36%), Gaps = 83/236 (35%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G      E   PG  G  G+KG+ GA G  G  G +GE+GAPG  G  GP G+PG  G  
Sbjct: 1822 GLNGKNGEPGDPGEDGRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQVGPP 1881

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG----------------------- 197
            G +G  G PG  G  GD G+ G KG+ G PG  GL G                       
Sbjct: 1882 G-QGFPGVPGSVGPKGDRGETGSKGEQGLPGERGLRGEPGSLPNAERLLETAGIKVSALR 1940

Query: 198  -------------------RDGLPGEPGLDGIPGRNGMDGIPG----------------- 221
                               R G  G+PG  G PG+ G  G PG                 
Sbjct: 1941 DIVETWDESSGGFLSVPERRPGPKGDPGERGPPGKEGSIGFPGERGLKGDRGDPGPQGPP 2000

Query: 222  --------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                                K G+P   G+PG  G  GE G  G RG RG+ G  G
Sbjct: 2001 GLALGERGPPGPPGLAGEPGKPGIP---GLPGPAGGVGEAGRPGERGERGEKGDRG 2053



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 92/216 (42%), Gaps = 72/216 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGY 168
            PGL G   + GE G  GE G KGE+G+ GAPG  GP GP+G    PG+ G +GP G  G 
Sbjct: 1821 PGLNG---KNGEPGDPGEDGRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQ 1877

Query: 169  PGP--QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG-------------- 212
             GP  QG PG  G  GPKGD G     G  G  GLPGE GL G PG              
Sbjct: 1878 VGPPGQGFPGVPGSVGPKGDRG---ETGSKGEQGLPGERGLRGEPGSLPNAERLLETAGI 1934

Query: 213  -------------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                                     R G  G PG+ G PGK+G   + G  GE+G+ G R
Sbjct: 1935 KVSALRDIVETWDESSGGFLSVPERRPGPKGDPGERGPPGKEG---SIGFPGERGLKGDR 1991

Query: 248  GNRGKSGINGV-------------------PGTPAI 264
            G+ G  G  G+                   PG P +
Sbjct: 1992 GDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGL 2027



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 56/119 (47%), Gaps = 25/119 (21%)

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G PGPQG  G  G++G KGD    G  GL G+ G PGEPGL G PG  G  G  G+ G P
Sbjct: 1428 GSPGPQGPAGRTGEKGEKGDC-EDGSPGLPGQPGAPGEPGLRGAPGVTGPKGDRGQTGTP 1486

Query: 227  GKDGIPGTNGTNGEKGMTGPRG---------------------NRGKSGINGVPGTPAI 264
            G+   PG  G  G  G  GP+G                      RG+ G  G PG PA+
Sbjct: 1487 GE---PGEKGERGPPGAVGPQGLPGVAGHPGVEGPEGPPGPAGRRGEKGEPGRPGDPAV 1542



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 92/268 (34%), Gaps = 122/268 (45%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------------ 147
            PG  GP G +GE G+KGE G+ GERG +G PG + P                        
Sbjct: 1889 PGSVGPKGDRGETGSKGEQGLPGERGLRGEPGSL-PNAERLLETAGIKVSALRDIVETWD 1947

Query: 148  -------------PGPQGIPGDEGKRGPKGDMGYPGPQGI-------------------- 174
                         PGP+G PG+ G  G +G +G+PG +G+                    
Sbjct: 1948 ESSGGFLSVPERRPGPKGDPGERGPPGKEGSIGFPGERGLKGDRGDPGPQGPPGLALGER 2007

Query: 175  --------------------------------PGDEGKRGPKGDMGYPGR---------- 192
                                            PG+ G+RG KGD G  GR          
Sbjct: 2008 GPPGPPGLAGEPGKPGIPGLPGPAGGVGEAGRPGERGERGEKGDRGEQGRDGLPGLPGPP 2067

Query: 193  -------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDG 230
                                G  G  G  GEPG DG  G  G  G+P   G  G PGK G
Sbjct: 2068 GPPGPKVAVEDPGTGPSREQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDQGEPGKRG 2127

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGV 258
              G+ G  GE+G+ GP G  G  G  G 
Sbjct: 2128 HDGSPGLPGERGVAGPEGKPGLQGPRGT 2155



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG  G+PG  G +GP G  G  G  G D  DG PG      +PG+ G  G PG  G PG 
Sbjct: 1421 PGLPGLPGSPGPQGPAGRTGEKGEKG-DCEDGSPG------LPGQPGAPGEPGLRGAPGV 1473

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
             G  G  G  G  G  G +G RG  G  G  G P +  +
Sbjct: 1474 TGPKGDRGQTGTPGEPGEKGERGPPGAVGPQGLPGVAGH 1512



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 12/83 (14%)

Query: 106  TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            ++E  PPGL+         GAKGE G  G+RG KG  GV   PG +G  G+ GKRG  G 
Sbjct: 2084 SREQGPPGLK---------GAKGEPGSDGDRGPKGDRGV---PGIKGDQGEPGKRGHDGS 2131

Query: 166  MGYPGPQGIPGDEGKRGPKGDMG 188
             G PG +G+ G EGK G +G  G
Sbjct: 2132 PGLPGERGVAGPEGKPGLQGPRG 2154


>gi|109096329|ref|XP_001100739.1| PREDICTED: collagen alpha-1(II) chain-like isoform 5 [Macaca mulatta]
          Length = 1487

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 92/198 (46%), Gaps = 33/198 (16%)

Query: 97   VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
               +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 815  AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 874

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
            QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 875  QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 934

Query: 187  MGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G PGR    GL G  G PGE G  G  G +G DG PG  GL G+ GI G  G  GE+G 
Sbjct: 935  SGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 994

Query: 244  TGPRGNRGKSGINGVPGT 261
             G  G  G+ G  G PG 
Sbjct: 995  PGLPGPSGEPGKQGAPGA 1012



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 447 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 506

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 507 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 566

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 567 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 626

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 627 GLRGLPG 633



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 84/187 (44%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 860

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 920

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ 
Sbjct: 921 GPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQR 980

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 981 GIVGLPG 987



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 434

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 435 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 494

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 495 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 551

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 552 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 580



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGASGPAGPPGAQGPPG 747

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 808 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 858

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 859 DAGAPGPQGPSGAPG 873



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 750 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 804 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 860

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 88/213 (41%), Gaps = 57/213 (26%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 851  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 910

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 911  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGP 970

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 971  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1030

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                 ++G PG +G  G  G  G +G+RG++G 
Sbjct: 1031 AGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 1063



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 638

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 698

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 699 GERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGAS 734



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 67/141 (47%), Gaps = 27/141 (19%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------- 181
           ++G  GE+GA G+ GP            +G +GD+G  GP+G PG +G R          
Sbjct: 748 LQGMPGERGAAGIAGP------------KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPG 795

Query: 182 -----GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                G KG++G PG  G  G  G PGE G  G PG  G  G PG DG PG  G  G  G
Sbjct: 796 PAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAG 855

Query: 237 TNGEKGMTGPRGNRGKSGING 257
             G+ G  GP+G  G  G  G
Sbjct: 856 QKGDAGAPGPQGPSGAPGPQG 876



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 85/199 (42%), Gaps = 30/199 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            PG  G  G +G PG+ G+ GP G  G+ GP G  G  G +G +G+ G  G  G  G  G
Sbjct: 808 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 867

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------------TNGEKGMTG 245
             G PG  G  G  G  G  G  G PG  G PG  G                 G  G  G
Sbjct: 868 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDG 927

Query: 246 PRGNRGKSGINGVPGTPAI 264
           P+G RG SG  G  G P +
Sbjct: 928 PKGARGDSGPPGRAGDPGL 946



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 374 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 427

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 428 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 487

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 488 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 547

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 548 PGRPGEPGLPGAR 560



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 83/208 (39%), Gaps = 69/208 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
            PGLQGP G  GE         KGE G+ G  G  GPPGPQG+ G  G      +RG +G 
Sbjct: 944  PGLQGPAGPPGE---------KGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 994

Query: 166  MGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGI 210
             G PGP G PG +G  G  GD                G PGR G          PG DG 
Sbjct: 995  PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADGP 1045

Query: 211  PGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTNGE 240
            PGR+G  G+                               G  G  G  G  G +G  G 
Sbjct: 1046 PGRDGAAGVKGDRGETGAVGAPGSPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGA 1105

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1106 RGIQGPQGPRGDKGEAGEPGERGLKGHR 1133



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 83/168 (49%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  G +G+PG  G  GPKG              
Sbjct: 687 GEAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGASGPAGPPGAQGPP 746

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 747 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 806

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 807 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 854



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 90/226 (39%), Gaps = 84/226 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------KGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+ G             +G+ 
Sbjct: 597 GQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQ 656

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QG+PG+ G  G   P+G+ G+PG        GL 
Sbjct: 657 GAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGSQGLQ 716

Query: 197 GRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GKD 223
           G  GLPG PG D                     G+PG  G  GI             G +
Sbjct: 717 GARGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 776

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 777 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 822



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 284 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 343

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 403

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 404 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 460

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 461 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 491


>gi|392347136|ref|XP_003749739.1| PREDICTED: collagen alpha-2(I) chain-like isoform 2 [Rattus
           norvegicus]
          Length = 1395

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 90/178 (50%), Gaps = 21/178 (11%)

Query: 112 PGLQGPIGQKGEIGAKG------------EMGVKGERGEKGAPGVVGPPG---PQGIPGD 156
           PG  GP G +GE G  G              G+ G +G  G PGV G PG   P+GIPG 
Sbjct: 279 PGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGP 338

Query: 157 ---EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGI 210
               G  GP+G +G PGP G  G+ G +G  G  G    PG  G +G+ G PGEPG  G 
Sbjct: 339 VGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGP 398

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G+ G PG  GLPG DG  G  G  G +G TGP G RG +G  G PG P +   +
Sbjct: 399 AGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGPR 456



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 92/209 (44%), Gaps = 36/209 (17%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGE------IGAKGEMGVKGERGEKGAPGVVGPPG 149
              + G   +     P G+ GP+G  G       +G  G  G KGE G KG PG  G  G
Sbjct: 317 ATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQG 376

Query: 150 PQGIPGDEGKR------------GPKGDMGYPGPQGIPGDEGK----------------- 180
           P G  G+EGKR            GP G  G PG +G+PG +G+                 
Sbjct: 377 PPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAG 436

Query: 181 -RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            RGP GD G PG  GL G  GLPG PG  G  G+ G  G+PG DG PG  G  G  G  G
Sbjct: 437 VRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAG 496

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  GP+G  G  G  G  G P +   +
Sbjct: 497 NIGFPGPKGPSGDPGKPGEKGHPGLAGAR 525



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 80/148 (54%), Gaps = 15/148 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G  G +GA G  G +G  GE G PG  GP G +G  G  GK    G+ G+PG  
Sbjct: 100 GLMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGK---AGEDGHPGKP 156

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKD 229
           G PG+ G  GP+G  G+PG  GL         PG  GI G NG+DG+   PG  G+ G+ 
Sbjct: 157 GRPGERGVVGPQGARGFPGTPGL---------PGFKGIRGHNGLDGLKGQPGAQGVKGEP 207

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G PG NGT G+ G  G  G RG+ G  G
Sbjct: 208 GAPGENGTPGQAGARGLPGERGRVGAPG 235



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 82/160 (51%), Gaps = 15/160 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G  GE G +G  G  G  G  G PG+ G PG +G+PG +G+    G MG PG +
Sbjct: 373 GAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGR---AGVMGPPGNR 429

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------LDGIPGRNGMDGIP 220
           G  G  G RGP GD G PG  GL G  GLPG PG            L GI GR G  G  
Sbjct: 430 GSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPA 489

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G PG  G +G+ G  G +G+ G +G  G PG
Sbjct: 490 GPRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPG 529



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 88/174 (50%), Gaps = 12/174 (6%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G   S     P G +GP+G  G  G  G +G  G RGE G    +G PGP+G  G
Sbjct: 452 LMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAG---NIGFPGPKGPSG 508

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D GK G KG  G  G +G PG +G  G +G  G  G  G  G  G  G PG  G+PG +G
Sbjct: 509 DPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSG 568

Query: 216 MDG---IPGKDGLPGKDGIPGTNGTNGEK------GMTGPRGNRGKSGINGVPG 260
             G    PG+ GLPG+ G+PG  G  GE+      G  GP G  G  G +G PG
Sbjct: 569 TAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGSRGPSGAPG 622



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 80/153 (52%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G   +     P G QGP G+ GE G  G  G +G  G  G  G  G PG  G PG
Sbjct: 101 LMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKPGRPG 160

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           + G  GP+G  G+PG  G+PG +G RG  G  G  G+ G  G  G PG PG +G PG+ G
Sbjct: 161 ERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGENGTPGQAG 220

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+PG+ G  G  G  G  G++G  G  GP G
Sbjct: 221 ARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG 253



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 78/149 (52%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ GP G +G  G  G  G  G+ G  G PG++GP G  G PG+ G  G +G +G PG  
Sbjct: 421 GVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGID 480

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG  G  GP+G+ G  G  G  G  G PG+PG  G PG  G  G PG DG  G  G P
Sbjct: 481 GRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPP 540

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G KG  GP G  G  G+ G  GT
Sbjct: 541 GPQGVQGGKGEQGPAGPPGFQGLPGPSGT 569



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 85/172 (49%), Gaps = 36/172 (20%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QGP+G+ GEIGA G  G  GE+G  G PG  GPPG           GP+G +G PG  
Sbjct: 852  GDQGPVGRTGEIGASGPPGFAGEKGPSGEPGTTGPPG---------TAGPQGLLGAPGIL 902

Query: 173  GIPGDEGKRG-P--KGDMGYPGRIGLD---------------GRDGLPGE------PGLD 208
            G+PG  G+RG P   G +G PG +G+                G +G PGE      PG D
Sbjct: 903  GLPGSRGERGLPGIAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSD 962

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGING 257
            G PGR+G  G  G+ G PG  G  G  G  G  G  GP    GNRG+ G  G
Sbjct: 963  GPPGRDGQPGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAG 1014



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 72/135 (53%), Gaps = 12/135 (8%)

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGP---KGDMGYPGRI 193
           GV   PGP G+    G RGP G +G PGPQG       PG+ G+ GP   +G  G PG+ 
Sbjct: 91  GVSAGPGPMGL---MGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKA 147

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G DG  G PG PG  G+ G  G  G PG  GLPG  GI G NG +G KG  G +G +G+ 
Sbjct: 148 GEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEP 207

Query: 254 GINGVPGTPAICAYK 268
           G  G  GTP     +
Sbjct: 208 GAPGENGTPGQAGAR 222



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 96/200 (48%), Gaps = 30/200 (15%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGP----- 162
           P G++GP    G+ G  GE G+ G RG  G+PG VGP G   P G+PG +G+ GP     
Sbjct: 434 PAGVRGP---NGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAG 490

Query: 163 ----KGDMGYPGPQGIPGDEGKRGPKGD------MGYPGRIGLDGRDGLPGEPGLDGIPG 212
                G++G+PGP+G  GD GK G KG        G PG  G +G  G PG  G+ G  G
Sbjct: 491 PRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKG 550

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRGNRGKSGINGVPGTPA 263
             G  G PG  GLPG  G  G  G  GE+G+          GPRG RG  G +G  G   
Sbjct: 551 EQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSG 610

Query: 264 ICAYKRESCSLLPNSETSQL 283
               +  S +  P+    + 
Sbjct: 611 PIGSRGPSGAPGPDGNKGEA 630



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 76/147 (51%), Gaps = 18/147 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +GP G  G+ G KG  G+ G RG  G  G     GPPGPQG+ G +G++GP G  G+
Sbjct: 501 PGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGF 560

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
              QG+PG  G           G +G  G  GLPGE GL G  G  G  G PG+ G  G 
Sbjct: 561 ---QGLPGPSGTA---------GEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGP 608

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGI 255
               G  G+ G  G  GP GN+G++G 
Sbjct: 609 S---GPIGSRGPSGAPGPDGNKGEAGA 632



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/152 (44%), Positives = 77/152 (50%), Gaps = 3/152 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG---DMGY 168
            PG  G  G  G  G  G  G  G +GE+G PG +GP G  G PG  G  GP G   + G 
Sbjct: 950  PGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGE 1009

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PGP G  G  G  GP+G  G  G  G  G  G  G  GL G+ G NG+ G+PG  GL G 
Sbjct: 1010 PGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDKGARGLPGLKGHNGLQGLPGLAGLHGD 1069

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG  G  G +G  GP G  GK G +G PG
Sbjct: 1070 QGAPGPVGPAGPRGPAGPSGPIGKDGRSGHPG 1101



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 81/186 (43%), Gaps = 41/186 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG QG    KGE GA GE G  G+ G +G PG    VG PGP G  G +G  GP G  G 
Sbjct: 198 PGAQG---VKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG- 253

Query: 169 P-------------------GPQGIPGDEGKRGPKGDMGYPGR---------------IG 194
           P                   GP G PG  G  GP+G+ G PG                 G
Sbjct: 254 PIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTG 313

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  GLPG  G  G+PG  G+ G  G  G  G  G+ G  G  G KG TG +G  G +G
Sbjct: 314 AKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAG 373

Query: 255 INGVPG 260
             G PG
Sbjct: 374 AQGPPG 379



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 89/201 (44%), Gaps = 41/201 (20%)

Query: 98  AMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            +QG         PPG QG   P G  GE+G  GE G+ GE G    PG  GP G +G P
Sbjct: 544 GVQGGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFG---LPGPAGPRGERGPP 600

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR- 213
           G+ G  GP G +G  GP G PG +G +G  G +G PG  G  G  GLPGE G  GIPG  
Sbjct: 601 GESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGK 660

Query: 214 --------NGMDGIPGKD--------------------------GLPGKDGIPGTNGTNG 239
                    G  G PG+D                          G PG  G PG  G +G
Sbjct: 661 GEKGETGLRGEIGNPGRDGARVSQMTPQGSLMTFLSCLHSGASLGAPGAIGAPGPAGASG 720

Query: 240 EKGMTGPRGNRGKSGINGVPG 260
           ++G  G  G  G +G  G PG
Sbjct: 721 DRGEAGAAGPSGPAGPRGSPG 741



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 80/179 (44%), Gaps = 36/179 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGDEGKR 160
           G  GP G  G+ GAKGE G KG +GE    G+VGP GP G              G  G  
Sbjct: 753 GFAGPAGSAGQPGAKGEKGTKGPKGEN---GIVGPTGPVGAAGPSGPNGPPGPAGSRGDG 809

Query: 161 GPKGDMGYPGPQG------------------IPGDEGKRGPKGDMGYPGR---IGLDGRD 199
           GP G  G+PG  G                    G EG RGP+GD G  GR   IG  G  
Sbjct: 810 GPPGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGEIGASGPP 869

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  GE G  G PG  G  G  G  GL G  GI G  G+ GE+G+ G  G  G+ G  G+
Sbjct: 870 GFAGEKGPSGEPGTTGPPGTAGPQGLLGAPGILGLPGSRGERGLPGIAGALGEPGPLGI 928



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 84/182 (46%), Gaps = 40/182 (21%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ----- 172
           +G  G IGA G  G  G+RGE GA G  GP GP+G PG+ G+ GP G  G+ GP      
Sbjct: 704 LGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGSAGQ 763

Query: 173 -GIPGDEGKRGPKGDMGYPGRIGLDGR-----------------DGLPGEPGLDGIPGRN 214
            G  G++G +GPKG+ G  G  G  G                  DG P  PG+ G PG  
Sbjct: 764 PGAKGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSRGDGGP--PGMTGFPGAA 821

Query: 215 G---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G                 G  GK+G+ G  G  G  G  GE G +GP G  G+ G +G P
Sbjct: 822 GRTGPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGEIGASGPPGFAGEKGPSGEP 881

Query: 260 GT 261
           GT
Sbjct: 882 GT 883



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 60/122 (49%), Gaps = 18/122 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG  G +G  G+ G +GE G  G  G  GA G  GP GPQGI GD+G+ G KG  G PG 
Sbjct: 992  PGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDKGARGLPGL 1051

Query: 171  ---------P--------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                     P        QG PG  G  GP+G  G  G IG DGR G PG  G  G+ G 
Sbjct: 1052 KGHNGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAGPSGPIGKDGRSGHPGPVGPAGVRGS 1111

Query: 214  NG 215
             G
Sbjct: 1112 QG 1113



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 83/198 (41%), Gaps = 54/198 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
           PG +G  G  G  G KG+ G +G +GE GAPG        G PG  G R   G +G +G 
Sbjct: 180 PGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGE------NGTPGQAGARGLPGERGRVGA 233

Query: 169 PGPQGI---------------------------------------PGDEGKRGPKGDMGY 189
           PGP G                                        PG  G  GP+G+ G 
Sbjct: 234 PGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGL 293

Query: 190 PG------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           PG        G  G +GL G  G  G+PG  G  G+PG  G+PG  G  G  G  G  G 
Sbjct: 294 PGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGE 353

Query: 244 TGPRGNRGKSGINGVPGT 261
            GP G++G++G  G PG+
Sbjct: 354 PGPAGSKGETGNKGEPGS 371


>gi|218506039|gb|ACK77661.1| RE33133p [Drosophila melanogaster]
          Length = 1779

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 98/273 (35%), Positives = 123/273 (45%), Gaps = 64/273 (23%)

Query: 86  VWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---------- 135
              + Y  IP  +++G          PG  G  G KG+ G+ G  G KGE          
Sbjct: 707 AGRDGYPGIPGQSIKGE---------PGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIK 757

Query: 136 ---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG---PKGDMGY 189
              +G KG PG  G PGPQG  G  G+RG  G  G  GPQG PG EG RG   P+G+ G 
Sbjct: 758 MPAKGNKGEPGQTGMPGPQGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGN 817

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL--PGKDGIPGTNGTNGEKGMTGPR 247
            G +G+ G    PG+ GL GIPGRNG  G  G+ G+  PG  G PG NG  GEKG  GP 
Sbjct: 818 QGAVGVPGN---PGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPT 874

Query: 248 ---------------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGS 292
                          G+RG +G+ GV G P I   K +   + P    + +  PP + G 
Sbjct: 875 GPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGP----AGVAGPPGVPGI 930

Query: 293 EHIFSSSPIVVREGDNVRLRCVATGHP-KPSII 324
                         D VR R  A G P  P ++
Sbjct: 931 --------------DGVRGRDGAKGEPGSPGLV 949



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 98/181 (54%), Gaps = 17/181 (9%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQ-------KGEIGAKGEMGVKGERGEKGAPGVVGPPG 149
            V +QGF  +       G++G  G        +G+ G++GE G  GE+GE+G  G+ GP G
Sbjct: 1194 VGLQGFTGAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAG 1253

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---- 205
              G  GD G +GP G  G     GIPG +G  GP+G++GYPG + + G  GLPG P    
Sbjct: 1254 VAGAKGDRGLQGPPGASGL---NGIPGAKGDIGPRGEIGYPG-VTIKGEKGLPGRPGRNG 1309

Query: 206  --GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              GL G PG  G  G+PG  G PG  G+PG  G  G KG  G  G+ G+ G +G PG P 
Sbjct: 1310 RQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGIAGSPGQPGQDGFPGAPG 1369

Query: 264  I 264
            +
Sbjct: 1370 L 1370



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 93/176 (52%), Gaps = 24/176 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
           PG +G  G+ G  G KG+MG+KG+ G K +    GP G +G      IPG +G RGP G+
Sbjct: 542 PGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGE 601

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------------GLDGI 210
            GYPG +G  G  G+ GP G+ G  GR GL G  G PG+P               G  G 
Sbjct: 602 RGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGA 661

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR---GKSGINGVPGTPA 263
           PG  G+ G  G +GLPG  G  G  G  GEKG++G  GN    G++G +G PG P 
Sbjct: 662 PGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPG 717



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 86/164 (52%), Gaps = 24/164 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGD 165
            PG  GP G KGE G  G  G  G+ G  GAPG+ G  GPQG  G+      EG++G KGD
Sbjct: 1338 PGPIGPAGSKGERGIAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGD 1397

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G  GP G+PG  G+   KGD GYPG  G DG  G PGE G  G  GR+G DG P   GL
Sbjct: 1398 RGLQGPSGLPGLVGQ---KGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTP---GL 1451

Query: 226  PGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGING 257
            PG+ G PG              G NG KG  G  G RG  GI G
Sbjct: 1452 PGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQG 1495



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 92/180 (51%), Gaps = 26/180 (14%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPG---- 170
             G+KGE G +G  G  G  G KG  G+ GPPG  G   IPG +G  GP+G++GYPG    
Sbjct: 1237 TGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIK 1296

Query: 171  -PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG----------------- 212
              +G+PG  G+ G +G +G PG IG  G  GL GEPGL G+PG                 
Sbjct: 1297 GEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGIAGSP 1356

Query: 213  -RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             + G DG PG  GL G  G  G  G  G  G  G +G++G  G+ G  G P +   K ++
Sbjct: 1357 GQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDT 1416



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 87/169 (51%), Gaps = 30/169 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++G  G KGE G+ G +G+ G +G++GAPG  GP G  G+ G  GKRGP G        
Sbjct: 932  GVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAG-------- 983

Query: 173  GIPGDEGKRGPKGDMGYPGR---------------IGLDGRDGL---PGEPGLDGIPGRN 214
             IPG  G +G KG  G  G                +G+ G  GL   PG+ GLDG+PG  
Sbjct: 984  -IPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEK 1042

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G PG DG P   G+PG     G+KG  GP G RG +G  G PG P 
Sbjct: 1043 GNQGFPGLDGPP---GLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPG 1088



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 81/148 (54%), Gaps = 12/148 (8%)

Query: 111  PPGLQGPIGQKGE---------IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            PPGL G  G+KG+          GA G +G  G+RG+ G PGV G PG  G  GD G  G
Sbjct: 858  PPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIG 917

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            P G  G PG  GI G  G+ G KG+ G PG +G+ G  G  G PG DG  G  G+ G PG
Sbjct: 918  PAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPG 977

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            K    G  GIPG +G  G+KG TG  GN
Sbjct: 978  KR---GPAGIPGVSGAKGDKGATGLTGN 1002



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/219 (36%), Positives = 102/219 (46%), Gaps = 53/219 (24%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP----- 150
           +   QG   S  E    GL+G  G +G  G +G  G+ G RGEKG  G VG PG      
Sbjct: 772 MPGPQGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDG 831

Query: 151 -QGIPGDEGKRGPKGD--------MGYPGPQGIPGDEGKRGPKGDMGYPGR--------- 192
            +GIPG  G+ GP+G+        MG PG  G+ G++G RGP G +G+PG          
Sbjct: 832 LRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGD 891

Query: 193 ------IGLDGRDGL------------------PGEPGLDGIPGRNGMDGIPGKDGL--- 225
                  G+ GR G+                  PG PG+DG+ GR+G  G PG  GL   
Sbjct: 892 RGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGM 951

Query: 226 ---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
               G  G PG +G  G  G+TG  G RG +GI GV G 
Sbjct: 952 PGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGA 990



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G++G IGA G +G +G  G  G PG+VG PGP G  G +G+RG  G  G PG 
Sbjct: 1302 PGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGIAGSPGQPGQ 1361

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGK 228
             G PG  G +G  G  G+ G  GL+G +G  G+ G  G+ G +G+ G+ G+    G PG 
Sbjct: 1362 DGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGL 1421

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +G  G  G  GE+G TGP+G  G+ G  G+PG
Sbjct: 1422 NGNDGPVGAPGERGFTGPKGRDGRDGTPGLPG 1453



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 89/188 (47%), Gaps = 13/188 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGY 168
           PG++GP G KG+ G  G  G +G++GE+G+PG+    G PG QG  G+ G  G  G  G 
Sbjct: 109 PGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGC 168

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G  GIPG EG  G  G  GY G++G  G  G P +   D   G  G  G  G  GL G 
Sbjct: 169 DGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGP 228

Query: 229 DGIPGTNGTNGEKG---MTGPRGNRGKSGINGV-------PGTPAICAYKRESCSLLPNS 278
            G PG  G  G+ G     GPRG  G  G  G        PG P I   K E  S  P  
Sbjct: 229 QGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPIK 288

Query: 279 ETSQLLIP 286
            T  ++ P
Sbjct: 289 PTHTVMGP 296



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 95/190 (50%), Gaps = 40/190 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           G+ GP G  G++G+KGE G          KGE+GE G  G  G  GPQG PG++G+RG  
Sbjct: 182 GMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDS 241

Query: 164 GDMGYPGPQGIPGDEGKRGPK--GDMGYPGRIGLDGRDGLP------------------- 202
           G  G  GP+G  G +G++G    G M  PG  G+ G  G P                   
Sbjct: 242 GPYGAKGPRGEHGLKGEKGASCYGPM-KPGAPGIKGEKGEPASSFPIKPTHTVMGPRGDM 300

Query: 203 ---GEPGL---DGIP---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
              GEPGL    G P   G  G+DG  G+ GLPG  G  G  G  G  G TG +G+RG+ 
Sbjct: 301 GQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEP 360

Query: 254 GINGVPGTPA 263
           G+NG+PG P 
Sbjct: 361 GLNGLPGNPG 370



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 82/169 (48%), Gaps = 30/169 (17%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPKGDMGYPGPQGIP 175
           G  G  G  G  G++G+ G PG  G  G  GI GD G +      GPKGD G  G  GIP
Sbjct: 531 GRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIP 590

Query: 176 GDEGKRGPKGDMGYPGRIGLD---GRDGLPGEPGLDGIPGRNGMDGIPGK---------- 222
           G +G RGP G+ GYPG  G D   G+ G PGE G DG  G  G  G PGK          
Sbjct: 591 GKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIE 650

Query: 223 --------DGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
                    G PG  G+ G  G  G  G+ GP+G    +G+ G++G PG
Sbjct: 651 PLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPG 699



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 88/182 (48%), Gaps = 17/182 (9%)

Query: 95  PLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--- 151
           PL   +G+  +       G +G  G  G  G KGE G KGE+G  GAPG  G PG     
Sbjct: 651 PLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRD 710

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG----RDGLPGE 204
              GIPG       KG+ G+ G  G  GD+G  G  G+ G PG   LD       G  GE
Sbjct: 711 GYPGIPGQS----IKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGE 766

Query: 205 PGLDGIPGRNGMDGIPGK---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG  G+PG  G DG PG+    GL G  G  G  G  G +G+ GPRG +G  G  GVPG 
Sbjct: 767 PGQTGMPGPQGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGN 826

Query: 262 PA 263
           P 
Sbjct: 827 PG 828



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 82/165 (49%), Gaps = 37/165 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL   +G+KGE G +G+ G+ G++GEKG PG  G  G QG  G  G  G KGD G PG 
Sbjct: 306 PGL---VGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGL 362

Query: 172 QGIPGDEGKRGPKGD----------------------------------MGYPGRIGLDG 197
            G+PG+ G++G  G                                   +G PG  GL+G
Sbjct: 363 NGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPGPQGLNG 422

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            DGLPG  G +G  G  G+ G PG +G PGK G  GT G NG KG
Sbjct: 423 VDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKG 467



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 96/202 (47%), Gaps = 50/202 (24%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------PQGIPGDEGKRG-- 161
            G++G  G  G  G +G  G+ GE+G +G PG+ GPPG          +G PG  G RG  
Sbjct: 1019 GIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDT 1078

Query: 162  -PKGDMGYPGPQGIPG--DEGKRGPKGDMGYPGRIGLDGRDGLPGEP------------- 205
             P G  G+PG +G+PG    G+ GP G+ G  GR G+DGRDG+ GE              
Sbjct: 1079 GPAGTPGWPGEKGLPGLAVHGRAGPPGEKGDQGRSGIDGRDGINGEKGEQGLQGVWGQPD 1138

Query: 206  -----GLDGIPGRNGMD------------GIP---GKDGLPGKDGIPGTNGTNGE---KG 242
                 G  GIPG  GMD            G P   G  G PG  G+PG  G  G    +G
Sbjct: 1139 EKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQG 1198

Query: 243  MTGPRGNRGKSGINGVPGTPAI 264
             TG  G +G+ GI G PG PA 
Sbjct: 1199 FTGAPGPKGERGIRGQPGLPAT 1220



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 93/198 (46%), Gaps = 50/198 (25%)

Query: 119 GQKGEIGAKGEMGVK---------GERGEKGAPGVVG------PPGPQGIPGDE------ 157
           GQKG++G KG++G K         G++G  G PG+ G      PPG +G PG+       
Sbjct: 555 GQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGIN 614

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGP------------KGDMGYPGRIGLDGRDGLPGEP 205
           G+ GP G+ G  G  G+PG  G+ G             KGD GYPG  G  G  G  G  
Sbjct: 615 GQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAE 674

Query: 206 GLDGIP---------GRNGMDGIPGKDGLP---GKDGIPGTNGTN-----GEKGMTGPRG 248
           GL GIP         G  G+ G PG DG P   G+DG PG  G +     G  G  G +G
Sbjct: 675 GLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKG 734

Query: 249 NRGKSGINGVPGTPAICA 266
           ++G  G +G  G P  CA
Sbjct: 735 DKGSFGRSGEKGEPGSCA 752



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 93/196 (47%), Gaps = 18/196 (9%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            GF  +      PG +G  G  G  G  G +G KG+ G  G  GV GPPG  GI G  G+ 
Sbjct: 878  GFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRD 937

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G KG+ G PG  G+PG++G RG  G+    G+ G  G  G+ G  G PG+ G  G  G  
Sbjct: 938  GAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGAT 997

Query: 218  GIPGKD---------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            G+ G D               G+ G  G+ G  G  G  GM G +GN+G  G++G PG P
Sbjct: 998  GLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLP 1057

Query: 263  AICAYKRESCSLLPNS 278
               + K +     P+ 
Sbjct: 1058 GDASEKGQKGEPGPSG 1073



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 12/119 (10%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGE 204
           +G+PG  G  G KG+MG+PG +G  GD+G++      G +GD G  G  GL G+ G+   
Sbjct: 91  RGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGV--- 147

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG+ G  G  G  GI GKDG  G+DGIPG  G +   GM GPRG  G+ G  G  G PA
Sbjct: 148 PGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLS---GMPGPRGYAGQLGSKGEKGEPA 203



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 77/173 (44%), Gaps = 34/173 (19%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           MG +G+ G+KG PG+VG  G  G  GD G  G KG+ G PG  G  G +G  GP G  G 
Sbjct: 294 MGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQ 353

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMD-------------------------------G 218
            G  G  G +GLPG PG  G PGR G                                 G
Sbjct: 354 KGDRGEPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVG 413

Query: 219 IPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAICAYK 268
            PG  GL G DG+PG  G NG+K   G+ G  GN G  G  G  GT  +   K
Sbjct: 414 APGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPK 466



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 94/196 (47%), Gaps = 38/196 (19%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGPPG 149
           + G C+S    C  G +G  G  G  G  G+ G +G  GE+G P         G  GPPG
Sbjct: 566 VGGKCSS----CRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPG 621

Query: 150 PQ------GIPGDEGKRGP------------KGDMGYPGPQGIPGDEGKRGPKGDMGYP- 190
            +      G+PG  G+ G             KGD GYPG  G  G +G +G +G  G P 
Sbjct: 622 EKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPG 681

Query: 191 --GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G  G  G  GL G PG DG PGR G DG P   G+PG+  I G  G +G  G  G +G
Sbjct: 682 PKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYP---GIPGQS-IKGEPGFHGRDGAKGDKG 737

Query: 249 NRGKSGINGVPGTPAI 264
           + G+SG  G PG+ A+
Sbjct: 738 SFGRSGEKGEPGSCAL 753



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 98/223 (43%), Gaps = 56/223 (25%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-P------ 150
             ++G   +  E   PGL G  G KG+ GA G  G KG  G  GAPG  GP G P      
Sbjct: 932  GVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAK 991

Query: 151  --------------------------QGIPGDEGKRGP------------KGDMGYP--- 169
                                       GI GD+G  G             KG+ G+P   
Sbjct: 992  GDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLD 1051

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR--NGMDGIPGKDGLPG 227
            GP G+PGD  ++G KG+ G  G  G  G  G PG PG  G+PG   +G  G PG+ G  G
Sbjct: 1052 GPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKGDQG 1111

Query: 228  KDGIPGTNGTNGEKGMTGPRG------NRGKSGINGVPGTPAI 264
            + GI G +G NGEKG  G +G       +G  G  G+PG P +
Sbjct: 1112 RSGIDGRDGINGEKGEQGLQGVWGQPDEKGSVGAPGIPGAPGM 1154



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 103/243 (42%), Gaps = 58/243 (23%)

Query: 113  GLQGPIGQKGEI------------GAKGEMGVKG------ERGEKGAPGVVGPPG----- 149
            G  GP G+KG+             G KGE G++G      E+G  GAPG+ G PG     
Sbjct: 1099 GRAGPPGEKGDQGRSGIDGRDGINGEKGEQGLQGVWGQPDEKGSVGAPGIPGAPGMDGLP 1158

Query: 150  -------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                     G PGD      +GD G PG  G+PG +G+ GP G  G+ G  G  G  G+ 
Sbjct: 1159 GAAGAPGAVGYPGD------RGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGIR 1212

Query: 203  GEPGLD-------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G+PGL        G  G  G  G  G+ G  G+ G+ G  G  G KG  G +G  G SG+
Sbjct: 1213 GQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGL 1272

Query: 256  NGVPGT------------PAICAYKRESCSLLPNSETSQLLI-PPTIVGSEHI--FSSSP 300
            NG+PG             P +     +     P     Q LI  P ++G   +   +  P
Sbjct: 1273 NGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEP 1332

Query: 301  IVV 303
             +V
Sbjct: 1333 GLV 1335



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 73/186 (39%), Gaps = 54/186 (29%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + GF     +    GLQGP G  G +G KG+ G          PG+ G  GP G PG+ 
Sbjct: 1384 GLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGY---------PGLNGNDGPVGAPGER 1434

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG----- 212
            G  GPK                              G DGRDG PG PG  G PG     
Sbjct: 1435 GFTGPK------------------------------GRDGRDGTPGLPGQKGEPGMLPPP 1464

Query: 213  ----------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                      RNG  G PG+ G  G  GI G  G  GE+G+ G  GN G+ G  G  G P
Sbjct: 1465 GPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGERGLIGETGNVGRPGPKGDRGEP 1524

Query: 263  AICAYK 268
                Y+
Sbjct: 1525 GERGYE 1530



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 83/180 (46%), Gaps = 42/180 (23%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------ 172
           G +G  G  G  G +G  G+KG  G+ G PG +G PG   K+G KG  G  GP+      
Sbjct: 416 GPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPG---KKGEKGTAGLNGPKGSIGPI 472

Query: 173 ---------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--G 215
                          G+PG  G +G KGD G PG  GL G  G  G  G  G PG +  G
Sbjct: 473 GHPGPPGPEGQKGDAGLPG-YGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLG 531

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKG---------------MTGPRGNRGKSGINGVPG 260
             G PG  G PG+ G  G  GT G+KG                 GP+G++G SG+ G+PG
Sbjct: 532 RPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPG 591


>gi|426372315|ref|XP_004053071.1| PREDICTED: collagen alpha-1(II) chain isoform 3 [Gorilla gorilla
           gorilla]
          Length = 1443

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 771 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 830

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 831 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 890

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 891 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 941

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 942 PGQRGERGFPGLPG 955



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 403 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 462

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 463 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 522

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 523 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 582

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 583 GLRGLPG 589



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 757 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 816

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 817 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 876

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 877 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 936

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 937 GIVGLPG 943



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 331 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 390

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 391 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 450

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 451 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 507

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 508 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 536



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 644 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 703

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 704 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 763

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 764 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 814

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 815 DAGAPGPQGPSGAPG 829



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 706 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 759

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 760 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 816

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 817 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 859



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 670 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 719

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 720 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 777

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 778 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 832



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 478 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 537

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 538 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 594

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 595 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 654

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 655 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 690



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 88/213 (41%), Gaps = 57/213 (26%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 807  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 866

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 867  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 926

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 927  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 986

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                 ++G PG +G  G  G  G +G+RG++G 
Sbjct: 987  AGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 1019



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 330 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 383

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 384 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 443

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 444 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 503

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 504 PGRPGEPGLPGAR 516



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 643 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 702

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 703 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 762

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 763 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 810



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 83/210 (39%), Gaps = 66/210 (31%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-- 179
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G  G  
Sbjct: 883  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQRGIV 939

Query: 180  ----KRGPKGDMGYPGRIGLDGRDGLPG---------------------------EPGLD 208
                +RG +G  G PG  G  G+ G PG                            PG D
Sbjct: 940  GLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGAD 999

Query: 209  GIPGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTN 238
            G PGR+G  G+                               G  G  G  G  G +G  
Sbjct: 1000 GPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPTGPTGKQGDRGEAGAQGPMGPSGPA 1059

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1060 GARGIQGPQGPRGDKGEAGEPGERGLKGHR 1089



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 240 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 299

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 300 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 359

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 360 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 416

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 417 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 447



 Score = 39.3 bits (90), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 80/216 (37%), Gaps = 69/216 (31%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            G+ G+ G +G  G +G RG  G PG+ G  G +G PG +G +G  G  G  G  G PG+
Sbjct: 213 AGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGE 272

Query: 178 EGKRGPKGDMGYPGR--------------------------------------------- 192
            G  GP G  G PG                                              
Sbjct: 273 NGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGE 332

Query: 193 ------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------- 236
                  G +G  G  GEPG  G PG  G  G PG DG+PG  G  G  G          
Sbjct: 333 AGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGP 392

Query: 237 --TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
               G +G TGP G +G++      G P I  +K E
Sbjct: 393 RGPPGPQGATGPLGPKGQT------GEPGIAGFKGE 422


>gi|426372317|ref|XP_004053072.1| PREDICTED: collagen alpha-1(II) chain isoform 4 [Gorilla gorilla
           gorilla]
          Length = 1459

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 787 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 846

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 847 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 906

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 907 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 957

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 958 PGQRGERGFPGLPG 971



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 419 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 478

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 479 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 538

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 539 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 598

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 599 GLRGLPG 605



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 773 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 832

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 833 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 892

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 893 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 952

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 953 GIVGLPG 959



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 347 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 406

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 407 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 466

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 467 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 523

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 524 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 552



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 660 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 719

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 720 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 779

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 780 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 830

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 831 DAGAPGPQGPSGAPG 845



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 722 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 775

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 776 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 832

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 833 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 875



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 686 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 735

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 736 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 793

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 794 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 848



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 494 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 553

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 554 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 610

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 611 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 670

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 671 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 706



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 88/213 (41%), Gaps = 57/213 (26%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 823  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 882

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 883  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 942

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 943  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1002

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                 ++G PG +G  G  G  G +G+RG++G 
Sbjct: 1003 AGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 1035



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 346 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 399

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 400 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 459

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 460 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 519

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 520 PGRPGEPGLPGAR 532



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 659 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 718

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 719 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 778

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 779 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 826



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 83/210 (39%), Gaps = 66/210 (31%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-- 179
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G  G  
Sbjct: 899  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQRGIV 955

Query: 180  ----KRGPKGDMGYPGRIGLDGRDGLPG---------------------------EPGLD 208
                +RG +G  G PG  G  G+ G PG                            PG D
Sbjct: 956  GLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGAD 1015

Query: 209  GIPGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTN 238
            G PGR+G  G+                               G  G  G  G  G +G  
Sbjct: 1016 GPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPTGPTGKQGDRGEAGAQGPMGPSGPA 1075

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1076 GARGIQGPQGPRGDKGEAGEPGERGLKGHR 1105



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 655 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 714

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 715 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 774

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 775 KGEVGPPGPAGSAGARGAPG 794



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 256 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 315

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 316 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 375

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 376 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 432

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 433 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 463



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 173 GIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG  G+RGP   +G  G+PG  GL G  G  G PGLDG  G  G  G+ G+ G PG++
Sbjct: 230 GKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN 289

Query: 230 GIPGTNGTNG 239
           G PG  G  G
Sbjct: 290 GSPGPMGPRG 299



 Score = 39.3 bits (90), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 80/216 (37%), Gaps = 69/216 (31%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            G+ G+ G +G  G +G RG  G PG+ G  G +G PG +G +G  G  G  G  G PG+
Sbjct: 229 AGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGE 288

Query: 178 EGKRGPKGDMGYPGR--------------------------------------------- 192
            G  GP G  G PG                                              
Sbjct: 289 NGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGE 348

Query: 193 ------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------- 236
                  G +G  G  GEPG  G PG  G  G PG DG+PG  G  G  G          
Sbjct: 349 AGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGP 408

Query: 237 --TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
               G +G TGP G +G++      G P I  +K E
Sbjct: 409 RGPPGPQGATGPLGPKGQT------GEPGIAGFKGE 438


>gi|119585301|gb|EAW64897.1| collagen, type VII, alpha 1 (epidermolysis bullosa, dystrophic,
            dominant and recessive), isoform CRA_e [Homo sapiens]
          Length = 2597

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 94/209 (44%), Gaps = 61/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                    PG   
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGARE 1717

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGL 195
            +G PGD G+ GP+G  G PG  G PG+ G                RGP G+ G  G  GL
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------KDGI 231
            DGR GL G+PG  G  G NG  G    PG+DGLPG                     +DG 
Sbjct: 1778 DGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGK 1837

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG NG NGE G  G  G +G+ G +G  G
Sbjct: 1838 PGLNGKNGEPGDPGEDGRKGEKGDSGASG 1866



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 88/190 (46%), Gaps = 46/190 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++G+P         G VGP   PGP G PG    
Sbjct: 2244 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2303

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLD---GI 210
            G  G KG+ G PG  G+ GD  G+ G KGD G P   G  G  GR G PG+PG D   G 
Sbjct: 2304 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGA 2361

Query: 211  PGRNGMD-----------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            PG  G                         G+PG  G PG  G PG  G  GE G  GP 
Sbjct: 2362 PGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPS 2421

Query: 248  GNRGKSGING 257
            G RG +G  G
Sbjct: 2422 GERGLAGPPG 2431



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 78/141 (55%), Gaps = 12/141 (8%)

Query: 133  KGERG--EKGAPGVVGPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPK 184
            KGE+G  E GAPG+   PG  G PG++G RGP      KGD G+PGP G  G++G+RGP 
Sbjct: 1444 KGEKGDSEDGAPGL---PGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP 1500

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  
Sbjct: 1501 GPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDV 1559

Query: 245  GPRGNRGKSGINGVPGTPAIC 265
            GP G RG +G+ G  G P + 
Sbjct: 1560 GPAGPRGATGVQGERGPPGLV 1580



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 89/199 (44%), Gaps = 60/199 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------------------- 143
            GL GP G+KGE G  GE G  GE G+KGAPG                             
Sbjct: 2333 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLG 2392

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKR------------------- 181
            + G PG  G+ G  G+ GP+G+MG PGP   +G+ G  G+                    
Sbjct: 2393 LPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPG 2452

Query: 182  --GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
              G KGD G PG +GL G  G  GEPG+       G DG PG++G  G  G PG+ G  G
Sbjct: 2453 ASGLKGDKGDPG-VGLPGPRGERGEPGI------RGEDGRPGQEGPRGLTGPPGSRGERG 2505

Query: 240  EKGMTGPRGNRGKSGINGV 258
            EKG  G  G +G  G + V
Sbjct: 2506 EKGDVGSAGLKGDKGDSAV 2524



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 93/255 (36%), Gaps = 106/255 (41%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G+ G  G +GE G KGERGE+G                           PG+ 
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG  G +GPKGD G PG +G  G+ G RG  G+ G PG  G+ G +
Sbjct: 2105 GEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2164

Query: 200  ---------------------------------------GLPGEPGLDGIPGRN------ 214
                                                   GL GEPG  G PGR       
Sbjct: 2165 GKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTG 2224

Query: 215  -----------------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                                         G  G PG+DG  GKDG  G+ G  G  G+ G
Sbjct: 2225 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPG 2284

Query: 246  PRGNRGKSGINGVPG 260
            P G +G+ G  G PG
Sbjct: 2285 PVGPKGEPGPTGAPG 2299



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 103/234 (44%), Gaps = 58/234 (24%)

Query: 95   PLVAMQGFCNSTKEY-CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            P  A+ G   +  E   P GL G +   GE GAKG+ G+ G RGEKG  G  G PG  G 
Sbjct: 2298 PGQAVVGLPGAKGEKGAPGGLAGDL--VGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGE 2355

Query: 154  PGDEGKRGPKG-----------------------DMGYPGPQGIPGD---EGKRGPKGDM 187
             G +G  GPKG                       D+G PG  G PG     G+ GP+G+M
Sbjct: 2356 DGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEM 2415

Query: 188  GYPGRIGLDGRDGLPGEPGLD---------------------GIPGRNGMDGI--PGKDG 224
            G PG     G  GL G PG +                     G+ G  G  G+  PG  G
Sbjct: 2416 GQPG---PSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRG 2472

Query: 225  LPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              G+ GI G +G  G+   +G+TGP G+RG+ G  G  G+  +   K +S  +L
Sbjct: 2473 ERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVIL 2526



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 83/182 (45%), Gaps = 45/182 (24%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRG-PK- 163
            G QGP G++G IG  GE G+KG+RG+ G       A G  GPPGP G+ G+ GK G P  
Sbjct: 1985 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGL 2044

Query: 164  -GDMGYPGPQGIPGDEGKRGPKGDMGYPGR--------------------------IGLD 196
             G  G  G  G PG+ G+RG KG+ G  GR                           GL 
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104

Query: 197  GRDGLPGEPGLDGIPGRN---------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G  G PG  G  G PG N         G+ GI G  G PG  G  G  G  GE+GM GP 
Sbjct: 2105 GEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2164

Query: 248  GN 249
            G 
Sbjct: 2165 GK 2166



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD 156
             ++G      +  P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD
Sbjct: 2478 GIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGD 2537

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
             G+RGP+G  G  GP+G  GD G +G KG+ G
Sbjct: 2538 MGERGPRGLDGDKGPRGDNGDPGDKGSKGEPG 2569



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 84/186 (45%), Gaps = 39/186 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            +G  G+ G+ GE G PG    PG  G  G +G R   G  G PG  G+PG  G +G  G 
Sbjct: 2241 QGSPGLPGQVGETGKPGA---PGRDGASGKDGDR---GSPGVPGSPGLPGPVGPKGEPGP 2294

Query: 187  MGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGKDGIPGTNG 236
             G PG+  +GL G  G  G PG     L G PG  G  G+P   G+ G  G+ G PG  G
Sbjct: 2295 TGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2354

Query: 237  TNGEKGMTGPRGNRGKS--------------------GINGVPGTPAICAYKRESCSLLP 276
             +G+KG  GP+G +G                      G+ G+PG P +  +  ++    P
Sbjct: 2355 EDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTG---P 2411

Query: 277  NSETSQ 282
              E  Q
Sbjct: 2412 RGEMGQ 2417



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 94/238 (39%), Gaps = 87/238 (36%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------ 148
            G      E   PG  G  G+KG+ GA G  G  G +GE+GAPG++GP             
Sbjct: 1839 GLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPP 1898

Query: 149  -----------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG------------------ 179
                       GP+G   D G+ G KG+ G PG +G+ G+ G                  
Sbjct: 1899 GQGFPGVPGGTGPKG---DRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASA 1955

Query: 180  ---------------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------- 208
                                 +RGPKGD G  G  G +G  G PGE GL           
Sbjct: 1956 LREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQG 2015

Query: 209  ---------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                     G PG +G+ G PGK G+P   G+PG  G  GE G  G RG RG+ G  G
Sbjct: 2016 PPGLALGERGPPGPSGLAGEPGKPGIP---GLPGRAGGVGEAGRPGERGERGEKGERG 2070



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE------ 178
            G +GE G  G RGE G PG  GP G  G PG  G+RG KGD+G  G +G  GD       
Sbjct: 2469 GPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGP 2528

Query: 179  -GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
             G RG KGDMG  G  GLDG  G  G+   +G PG  G  G PG  G
Sbjct: 2529 PGPRGAKGDMGERGPRGLDGDKGPRGD---NGDPGDKGSKGEPGDKG 2572



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 101  GFCNSTKEYCPPG--LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            G      E  PPG  L GP G  G  G  G  G+ G +G  G PG VG  G  G PG +G
Sbjct: 2204 GLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDG 2263

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIPGRNGM 216
              G  GD G PG   +PG  G  GP G  G PG  G  G+   GLPG  G  G PG    
Sbjct: 2264 ASGKDGDRGSPG---VPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAG 2320

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            D +    G PG  G  G  G  GEKG  G  G  G  G +G  G P    +K
Sbjct: 2321 DLV----GEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFK 2368



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 75/162 (46%), Gaps = 38/162 (23%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGP 183
            +G  G KG PG  GPPG        G  GP G +         G  GPQG PG  G+ G 
Sbjct: 2200 QGPSGLKGEPGETGPPG-------RGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGE 2252

Query: 184  KGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTN--- 235
             G  G PGR G  G+D   G PG PG  G+PG  G  G PG  G PG+   G+PG     
Sbjct: 2253 TGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEK 2312

Query: 236  --------------GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                          G  G++G+ GPRG +G++G  G PG P 
Sbjct: 2313 GAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2354



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 62/120 (51%), Gaps = 29/120 (24%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1250 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGR 1306

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-IGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG+ G RGPKG+ G PG+ IG +G  GLPG
Sbjct: 1307 PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEG-PGLPG 1365



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 93/246 (37%), Gaps = 99/246 (40%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
            P + GP G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD             
Sbjct: 1547 PAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1606

Query: 157  --------------------------EGKRGPKGD------------MGYPGPQGIPGDE 178
                                      +G+ G KGD             G  G +G PG  
Sbjct: 1607 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGL 207
            G  G KGD G PG    DGR+G P                               GEPG 
Sbjct: 1667 GPVGEKGDQGDPGE---DGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGD 1723

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGI 255
             G  G  G  G PG  G PG+ GI G              G  GEKG  GP G  G+SG+
Sbjct: 1724 RGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGL 1783

Query: 256  NGVPGT 261
            +G PG 
Sbjct: 1784 DGKPGA 1789



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 76/168 (45%), Gaps = 35/168 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---------------------------RGEKGAPGV 144
            PG  GP G+ G+ G  GE G+ G                            +G+KG PGV
Sbjct: 2406 PGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGV 2465

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRD-- 199
             G PGP+G  G+ G RG  G  G  GP+G+   PG  G+RG KGD+G  G  G  G    
Sbjct: 2466 -GLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAV 2524

Query: 200  --GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              G PG  G  G  G  G  G+ G  G  G +G PG  G+ GE G  G
Sbjct: 2525 ILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKG 2572



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 70/151 (46%), Gaps = 30/151 (19%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G   S  E  P G  G IG KG+ G  G +G  GE+GE+G P   GP G +G+PG  
Sbjct: 1456 GLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP---GPAGSRGLPGVA 1512

Query: 158  G---------------KRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYPG 191
            G               ++G KG+ G P           GP+G  GD G  GP+G  G  G
Sbjct: 1513 GRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQG 1572

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
              G  G   LPG+PG  G PG  G  G+ G+
Sbjct: 1573 ERGPPGLV-LPGDPGPKGDPGDRGPIGLTGR 1602



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 87/239 (36%), Gaps = 95/239 (39%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------------------- 144
            GP G +GE G+KGE G+ GERG +G PG                                
Sbjct: 1910 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 1969

Query: 145  -----------------VGPP---GPQGIPGDEGKRGPK-------------GDMGYPGP 171
                              GPP   GP G PG+ G +G +             G+ G PGP
Sbjct: 1970 FLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2029

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------ 219
             G+ G+ GK    G  G PGR G  G  G PGE G  G  G  G  G             
Sbjct: 2030 SGLAGEPGK---PGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGP 2086

Query: 220  ------------PGKDGLPGKDGIPGTNGTNGEKGM---TGPRGNRGKSGINGVPGTPA 263
                        PG  GL G+ G PG  G  GE G     GP+G+RG  GI G  G P 
Sbjct: 2087 PGPPGPKVSVDEPGP-GLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPG 2144



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 91/209 (43%), Gaps = 47/209 (22%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++GF         PG++GP G+KG+   +G  G+ G  G  G PG  GP GP G     
Sbjct: 1746 GIEGFRGPPGPQGDPGVRGPAGEKGD---RGPPGLDGRSGLDGKPGAAGPSGPNGA---- 1798

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLD 208
                  G  G PG  G+PG  G++G  G  G P         G+ GL+G++G PG+PG D
Sbjct: 1799 -----AGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGED 1853

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG-----------------------EKGMTG 245
               GR G  G  G  G  G+DG  G  G  G                         G TG
Sbjct: 1854 ---GRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTG 1910

Query: 246  PRGNRGKSGINGVPGTPAICAYKRESCSL 274
            P+G+RG++G  G  G P     + E  S+
Sbjct: 1911 PKGDRGETGSKGEQGLPGERGLRGEPGSV 1939



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 75/175 (42%), Gaps = 47/175 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI----------------- 153
            P G +G  G KGE G  GE G++GE G    P V       GI                 
Sbjct: 1911 PKGDRGETGSKGEQGLPGERGLRGEPGS--VPNVDRLLETAGIKASALREIVETWDESSG 1968

Query: 154  ---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD-------------- 196
               P  E +RGPKGD G    QG PG EG       +G+PG  GL               
Sbjct: 1969 SFLPVPERRRGPKGDSGE---QGPPGKEGP------IGFPGERGLKGDRGDPGPQGPPGL 2019

Query: 197  --GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
              G  G PG  GL G PG+ G+ G+PG+ G  G+ G PG  G  GEKG  G +G 
Sbjct: 2020 ALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGR 2074



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 73/168 (43%), Gaps = 45/168 (26%)

Query: 112  PGLQGPIGQKGEIGAK------GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL G  G++G  G +      G+ GV+G  GEK                  G RGP G 
Sbjct: 1736 PGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEK------------------GDRGPPGL 1777

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------L 207
             G  G  G PG  G  GP G     G+ G  GRDGLPG  G                   
Sbjct: 1778 DGRSGLDGKPGAAGPSGPNGAA---GKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGE 1834

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            DG PG NG +G PG  G  G+ G  G +G +G +G  GP+G RG  GI
Sbjct: 1835 DGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGI 1882



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 72/189 (38%), Gaps = 66/189 (34%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPG 149
            +G    + E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG
Sbjct: 1978 RGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPG 2037

Query: 150  PQGIPGDEGKRGPKGDMGYPG--------------------------------------- 170
              GIPG  G+ G  G+ G PG                                       
Sbjct: 2038 KPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVD 2097

Query: 171  -----------PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                       P G+ G +G+      +GPKGD G PG  G  G  G  G+ G  G+PG 
Sbjct: 2098 EPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGE 2157

Query: 214  NGMDGIPGK 222
             GM G  GK
Sbjct: 2158 RGMAGPEGK 2166



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 36/71 (50%), Gaps = 12/71 (16%)

Query: 184  KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            KG+ G+PG       DG PG       PGR G  G PG  GL G  G+PG  G  GE+G 
Sbjct: 1295 KGERGFPGA------DGRPGS------PGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGP 1342

Query: 244  TGPRGNRGKSG 254
             GP+G  G  G
Sbjct: 1343 RGPKGEPGAPG 1353



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 42/102 (41%), Gaps = 27/102 (26%)

Query: 183  PKGDMGYPGRIGLDGR---------------------------DGLPGEPGLDGIPGRNG 215
            PKG  G PG +GL G+                            G  G PG DG PG  G
Sbjct: 1252 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPG 1311

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G PG  G PG  G PG  G  G+ G  GPRG +G+ G  G
Sbjct: 1312 RAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPG 1353



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 13/79 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGE----------RGEKGAPGVVGPPGPQGIPGDEGKR 160
            PPG +G  G+KG++G+ G  G KG+          RG KG    +G  GP+G+ GD+G R
Sbjct: 2497 PPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGD---MGERGPRGLDGDKGPR 2553

Query: 161  GPKGDMGYPGPQGIPGDEG 179
            G  GD G  G +G PGD+G
Sbjct: 2554 GDNGDPGDKGSKGEPGDKG 2572


>gi|432921052|ref|XP_004080029.1| PREDICTED: uncharacterized protein LOC101168818 [Oryzias latipes]
          Length = 1760

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 78/143 (54%), Gaps = 10/143 (6%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G KG+ G  G  G  G++G  G PG  G PG  G PG  G +GPKGD G+PG  G PG  
Sbjct: 1053 GIKGDPGPPGLAGFPGQKGIAGLPGDPGLPGTDGRPGTPGPQGPKGDSGFPGSPGSPGFP 1112

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            G +G  GDMG PG  GL          GL GI GR G+ G PG  G PG  G PG+ G  
Sbjct: 1113 GPKGNMGDMGIPGPSGLK---------GLPGISGRPGLPGQPGAPGFPGSKGEPGSAGV- 1162

Query: 239  GEKGMTGPRGNRGKSGINGVPGT 261
            G  GM G +G+ G+ G  G PG+
Sbjct: 1163 GPAGMKGQKGDPGQPGFPGNPGS 1185



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 94/213 (44%), Gaps = 62/213 (29%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKG 164
            PPGL G  GQKG  G  G+ G+ G  G  G PG  GP      PG  G PG  G +G  G
Sbjct: 1060 PPGLAGFPGQKGIAGLPGDPGLPGTDGRPGTPGPQGPKGDSGFPGSPGSPGFPGPKGNMG 1119

Query: 165  DMGYPGPQGI---------------------PGDEGK-----------RGPKGDMGYPGR 192
            DMG PGP G+                     PG +G+           +G KGD G PG 
Sbjct: 1120 DMGIPGPSGLKGLPGISGRPGLPGQPGAPGFPGSKGEPGSAGVGPAGMKGQKGDPGQPGF 1179

Query: 193  IGLDGRD------------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
             G  G                    G PG PG  G PG  G  G+ G+ G+PG  G P  
Sbjct: 1180 PGNPGSKGSSGLPGLPGGPGGPGAKGEPGLPGFIGSPGPTGPKGLDGEPGIPGPLGSP-- 1237

Query: 235  NGTNGEKGMTGP---RGNRGKSGINGVPGTPAI 264
             G  GE G+TGP   RG +G++G +G+PG P I
Sbjct: 1238 -GRPGEPGLTGPPGLRGEKGQAGRDGIPGPPGI 1269



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 70/134 (52%), Gaps = 20/134 (14%)

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGI---------------PGDEGKRGPKGDMGYPGRIG 194
            P+ I G +G  GP G  G+PG +GI               PG  G +GPKGD G+PG  G
Sbjct: 1048 PENIKGIKGDPGPPGLAGFPGQKGIAGLPGDPGLPGTDGRPGTPGPQGPKGDSGFPGSPG 1107

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMT--GPRGN 249
              G  G  G  G  GIPG +G+ G+P   G+ GLPG+ G PG  G+ GE G    GP G 
Sbjct: 1108 SPGFPGPKGNMGDMGIPGPSGLKGLPGISGRPGLPGQPGAPGFPGSKGEPGSAGVGPAGM 1167

Query: 250  RGKSGINGVPGTPA 263
            +G+ G  G PG P 
Sbjct: 1168 KGQKGDPGQPGFPG 1181



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 68/154 (44%), Gaps = 22/154 (14%)

Query: 136  RGEKGAPGVVGPPGPQGIPGD----------------EGKRGPKGDMGYPGPQGIPGDEG 179
            +G+ G PG  GP GP G  GD                E  +G KGD G PG  G PG   
Sbjct: 1012 KGDPGFPGRDGPQGPIGPKGDRGDPGIPGPPGIARPPENIKGIKGDPGPPGLAGFPGQ-- 1069

Query: 180  KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
                KG  G PG  GL G DG PG PG  G  G +G  G PG  G PG  G  G  G  G
Sbjct: 1070 ----KGIAGLPGDPGLPGTDGRPGTPGPQGPKGDSGFPGSPGSPGFPGPKGNMGDMGIPG 1125

Query: 240  EKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
              G+ G  G  G+ G+ G PG P     K E  S
Sbjct: 1126 PSGLKGLPGISGRPGLPGQPGAPGFPGSKGEPGS 1159



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 68/136 (50%), Gaps = 12/136 (8%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           VA +G      +   PG  GP GQ G+ G  G  GVKG+ G  G+ G+ G PGP+G PG 
Sbjct: 752 VAEKGLPGPRGQDGDPGRPGPSGQPGQPGFPGLPGVKGDPGVPGS-GLPGLPGPKGFPGI 810

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI-----------GLDGRDGLPGEP 205
            G+ G   + G PG  G PG  G  GPKG+ G+               G  G  G PG P
Sbjct: 811 AGQPGAPAEPGRPGVDGFPGQPGLPGPKGEPGFGLPGPPGQPGLQGQKGFPGPKGDPGFP 870

Query: 206 GLDGIPGRNGMDGIPG 221
           G  G PGR+G DG PG
Sbjct: 871 GSPGQPGRSGFDGTPG 886



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 55/118 (46%), Gaps = 33/118 (27%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR--------- 181
           GVKG +GE+G PG+ G PG  G PG EG  GP+G+ G  G  G+PG +G R         
Sbjct: 39  GVKGAKGERGLPGLTGQPGVPGFPGPEGPIGPRGETGSDGLPGLPGLKGIRGPPGLPGFP 98

Query: 182 ------------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
                                   G KGD G+PG  G+ G +G PG PGL G  G  G
Sbjct: 99  GTPGVAGIPGHDGPPGPRGIPGCNGTKGDRGFPGSPGIPGFEGRPGPPGLSGQKGEPG 156



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 7/92 (7%)

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           ++G  GP+G  G PGR G  G+   PG+PG  G+PG  G  G+PG  GLPG   +PG  G
Sbjct: 754 EKGLPGPRGQDGDPGRPGPSGQ---PGQPGFPGLPGVKGDPGVPG-SGLPG---LPGPKG 806

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G  G     G+ G++G PG P +   K
Sbjct: 807 FPGIAGQPGAPAEPGRPGVDGFPGQPGLPGPK 838



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 50/106 (47%), Positives = 60/106 (56%), Gaps = 1/106 (0%)

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            GAPGV G PG  G PG    +GPKG  G PG  G  G  G +G KG  G PG+ G  G+ 
Sbjct: 1318 GAPGVPGNPGNPGSPGRS-MQGPKGLQGLPGLPGREGGGGVKGEKGFPGSPGQPGFPGQK 1376

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G PG PG  G PG +G+ G+ G  G+PG  G PG  G  G +G +G
Sbjct: 1377 GDPGTPGFPGSPGSSGLPGLKGDSGVPGVPGFPGPKGDQGPQGPSG 1422



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP--GKDGIPGTNGTNGEKGMTGPR 247
           PGR+G  G  G+PG PGL G  G  G  G PG+ G P  G  G+PGT G  GEKG  G  
Sbjct: 448 PGRVGPKGEPGIPGSPGLKGERGPQGFTGPPGEPGRPATGGRGVPGTPGYPGEKGQKGRP 507

Query: 248 GNRGKS 253
           G+ G S
Sbjct: 508 GDPGIS 513



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           KGE+GE G PG  G PG  G PG +G  G KG+ G PG   +PG +G  G KGD G+PG 
Sbjct: 282 KGEKGEPGEPGKRGKPGKDGDPGPQGNPGFKGEPGLPG---LPGRDGSAGQKGDRGFPGP 338

Query: 193 IG 194
            G
Sbjct: 339 PG 340



 Score = 43.1 bits (100), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 78/200 (39%), Gaps = 83/200 (41%)

Query: 136  RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------------------PGD 177
            +G KG PG+ G    + +PG  G+R   G  G+PG QG                   PG 
Sbjct: 932  KGAKGDPGIPG----RDMPGQPGER---GSPGFPGSQGPVGSPGPPGGPGRDGFPGSPGQ 984

Query: 178  EGKRGP---------------------KGDMGYPGRIG---------------------- 194
            +G  GP                     KGD G+PGR G                      
Sbjct: 985  KGDLGPMGPPGPPGGPGGPGIPGAPGFKGDPGFPGRDGPQGPIGPKGDRGDPGIPGPPGI 1044

Query: 195  ------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
                  + G  G PG PGL G PG+ G+ G+PG  GLPG DG PGT          GP+G
Sbjct: 1045 ARPPENIKGIKGDPGPPGLAGFPGQKGIAGLPGDPGLPGTDGRPGT---------PGPQG 1095

Query: 249  NRGKSGINGVPGTPAICAYK 268
             +G SG  G PG+P     K
Sbjct: 1096 PKGDSGFPGSPGSPGFPGPK 1115



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           G+ GE G +G+ G  G+ G +G PG  G PG  G+PG +G  G KGD G+PGP G
Sbjct: 286 GEPGEPGKRGKPGKDGDPGPQGNPGFKGEPGLPGLPGRDGSAGQKGDRGFPGPPG 340



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 6/65 (9%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
            G+ G+ G  G++G+ G PG  G PG  G+PG       KGD G PG  G PG +G +GP+
Sbjct: 1365 GSPGQPGFPGQKGDPGTPGFPGSPGSSGLPGL------KGDSGVPGVPGFPGPKGDQGPQ 1418

Query: 185  GDMGY 189
            G  G+
Sbjct: 1419 GPSGF 1423


>gi|296205053|ref|XP_002749597.1| PREDICTED: collagen alpha-1(III) chain [Callithrix jacchus]
          Length = 1465

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 80/175 (45%), Gaps = 45/175 (25%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG---------------------------IPGDE 157
           GAKGE+G  G  G  GAPG  G PGPQG                           IPG  
Sbjct: 348 GAKGEVGPAGSPGSSGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407

Query: 158 GK------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G                   RG  G+ G  G +G PG  G+RG  G  G PG  G DG+D
Sbjct: 408 GLIGARGPPGPPGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGTPGIPGAKGEDGKD 467

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G PGEPG +G+PG  G  G PG  G  G +G+PG  G  GE+G  GP G RG +G
Sbjct: 468 GSPGEPGANGLPGAAGERGAPGFRGPAGPNGVPGEKGPAGERGAPGPAGPRGAAG 522



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 61/112 (54%), Gaps = 9/112 (8%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G+ G+ GAKGE G +GERGE G P         GIPG +G+ G  G  G PG  G
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGTP---------GIPGAKGEDGKDGSPGEPGANG 477

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +PG  G+RG  G  G  G  G+ G  G  GE G  G  G  G  G PG+DGL
Sbjct: 478 LPGAAGERGAPGFRGPAGPNGVPGEKGPAGERGAPGPAGPRGAAGEPGRDGL 529



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 89/224 (39%), Gaps = 78/224 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
           PGL+G  G  GE GA G MG +G  GE+G PG+   PG  G  G++G RG          
Sbjct: 281 PGLKGENGLPGENGAPGPMGPRGAPGERGRPGL---PGAAGARGNDGARGSDGQPGPPGP 337

Query: 164 ----------------GDMGYPGPQGIPGDEGKRGP---------------------KGD 186
                           G  G PG  G PG  G+ GP                     KG+
Sbjct: 338 PGTAGFPGSPGAKGEVGPAGSPGSSGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGE 397

Query: 187 M---GYPGRIGL------------------------DGRDGLPGEPGLDGIPGRNGMDGI 219
           M   G PG  GL                         G++G  GEPG  G  G  G  GI
Sbjct: 398 MGPAGIPGAPGLIGARGPPGPPGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGTPGI 457

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
           PG  G  GKDG PG  G NG  G  G RG    RG +G NGVPG
Sbjct: 458 PGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGVPG 501



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 80/182 (43%), Gaps = 39/182 (21%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  G+ G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG++G  G++G  GP+G+                  +G+ G  G+PG P
Sbjct: 348 GAKGEVGPAGSPGSSGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407

Query: 263 AI 264
            +
Sbjct: 408 GL 409



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 82/214 (38%), Gaps = 63/214 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306

Query: 171 PQGIPGDEGKRGPKGDMGYPG------------------RIGLDGRDGLPGEPGLDGIPG 212
            +G PG  G  G +G+ G  G                    G  G  G  G PG  G PG
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSSGAPG 366

Query: 213 RNGMDGIPGK------------------------DGLPGKDGI----------------- 231
           + G  G  G                          G+PG  G+                 
Sbjct: 367 QRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLIGARGPPGPPGANGAPG 426

Query: 232 ----PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                G  G NG KG  GPRG RG++G  G+PG 
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGTPGIPGA 460



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 9/72 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------P 162
           PG +G  G+ G  G  G  G+ G  GE+GAPG  GP GP G+PG++G  G         P
Sbjct: 458 PGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGVPGEKGPAGERGAPGPAGP 517

Query: 163 KGDMGYPGPQGI 174
           +G  G PG  G+
Sbjct: 518 RGAAGEPGRDGL 529



 Score = 40.4 bits (93), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 51/136 (37%), Gaps = 54/136 (39%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRG-------------- 182
            G PG  G  GPKGD G PG +G               I G  G RG              
Sbjct: 912  GAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSP 971

Query: 183  ----PKGDMGYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                 KG+ G PG  GL G              G  GEPG          DG PG DGLP
Sbjct: 972  GPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPG---------RDGNPGSDGLP 1022

Query: 227  GKDGIPGTNGTNGEKG 242
            G+DG PG  G  GE G
Sbjct: 1023 GRDGSPGGKGDRGENG 1038


>gi|292352|gb|AAA36358.1| collagen, partial [Homo sapiens]
          Length = 718

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 91/200 (45%), Gaps = 58/200 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  GP GQKGE    GE   KGE+G++G PGV+G                       G 
Sbjct: 365 PGSVGPKGQKGE---PGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQ 421

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK----------------GDMGYPGRIG 194
           QG  G  G RGP GD+G PG  GIPG +G +G K                G+ G PG+  
Sbjct: 422 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKS- 480

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGM 243
                 LPGEPGLDG PG  G  G  G+ GLPG             GIPG  G  G  G 
Sbjct: 481 ------LPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGE 534

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            G +G RG  G+ G PGTP 
Sbjct: 535 PGIQGPRGLPGLPGTPGTPG 554



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 70/147 (47%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG----------------EK 139
           L   QG   S     PPG    +G  GE G  G+ G+KGE+G                E 
Sbjct: 418 LKGQQGSAGSMGPRGPPG---DVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEA 474

Query: 140 GAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPG---------PQGI--PGDEGKRGPKGD 186
           G PG  + G PG  G PG  G RGPKG+ G PG         PQGI  PG  G +GP G+
Sbjct: 475 GPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGE 534

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG+PGR
Sbjct: 535 PGIQGPRGLPGLPGTPGTPGNDGVPGR 561



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 82/196 (41%), Gaps = 62/196 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  G +G KG+ G  GE   KGE+G++G PGV+G                       G 
Sbjct: 362 PGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQ 421

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK-------------------GDMG--Y 189
           QG  G  G RGP GD+G PG  GIPG +G +G K                   G  G   
Sbjct: 422 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKSL 481

Query: 190 PGRIGLDGRDGLPGE---------PGLDG-----------IPGRNGMDGIPGKDGLPGKD 229
           PG  GLDG  G PG          PG+ G           IPGR G  G  G+ G+ G  
Sbjct: 482 PGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGEPGIQGPR 541

Query: 230 GIPGTNGTNGEKGMTG 245
           G+PG  GT G  G  G
Sbjct: 542 GLPGLPGTPGTPGNDG 557



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 78/168 (46%), Gaps = 33/168 (19%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A G  G KGE G  G PG VGP G +G PG+   +G KGD G PG  G  G +G+ G  G
Sbjct: 349 AGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPG 408

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI-------------- 231
             G  G  GL G+ G  G  G  G PG  G+   PG+ G+PGK GI              
Sbjct: 409 PPGLIGSPGLKGQQGSAGSMGPRGPPGDVGL---PGEHGIPGKQGIKGEKGDPGGIIGPP 465

Query: 232 ----------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                           PG  G +G  G  GPRG +G+ G+ GV G+P 
Sbjct: 466 GLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPG 513



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 92/239 (38%), Gaps = 80/239 (33%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGD 165
           PG  G  G++G  G+KGE G KGE+GEKG P + G  G  G+ GD       G +G KGD
Sbjct: 216 PGFPGQKGEQGFEGSKGETGEKGEQGEKGDPALAGLNGENGLKGDLGPHGPPGPKGEKGD 275

Query: 166 ------------MGYPGPQGIPGDEGKRGP------------------------------ 183
                       +G  GPQG PG EG+RG                               
Sbjct: 276 TGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLGG 335

Query: 184 -----------------KGDMG------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                            KGD G      +PG +G  G+ G PGEP   G  G  G  G+ 
Sbjct: 336 YYNKDNKGNDEHEAGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVI 395

Query: 221 GKDGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G+ G+          G PG  G  G  G  GPRG  G  G+ G  G P     K E
Sbjct: 396 GSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGE 454



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 9/84 (10%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KGE G  G  G  G++G KG PG  G  G  G PG       KG+ G+ G +G  G++G+
Sbjct: 186 KGEAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQ------KGEQGFEGSKGETGEKGE 239

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGE 204
           +G KGD   P   GL+G +GL G+
Sbjct: 240 QGEKGD---PALAGLNGENGLKGD 260



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G PG    PG  G++G KG+   PG  GL G  G PG+ G  G  G  G  G  G+
Sbjct: 186 KGEAGLPG---APGSPGQKGHKGE---PGENGLHGAPGFPGQKGEQGFEGSKGETGEKGE 239

Query: 223 DGLPGKDGIPGTNGTNGEKG 242
            G  G   + G NG NG KG
Sbjct: 240 QGEKGDPALAGLNGENGLKG 259



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 58/127 (45%), Gaps = 11/127 (8%)

Query: 68  EIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEY-----CPP--GLQGPIGQ 120
           EI + +  +Q+   N    W+ A++      M  +  + +E      C P  G  G  G 
Sbjct: 139 EISDTKCPEQDGFGNIASSWVTAHAS----KMSSYLPAKQELKDQCQCIPNKGEAGLPGA 194

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            G  G KG  G  GE G  GAPG  G  G QG  G +G+ G KG+ G  G   + G  G+
Sbjct: 195 PGSPGQKGHKGEPGENGLHGAPGFPGQKGEQGFEGSKGETGEKGEQGEKGDPALAGLNGE 254

Query: 181 RGPKGDM 187
            G KGD+
Sbjct: 255 NGLKGDL 261



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 34/69 (49%)

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE GL G PG  G  G  G+ G  G  G PG  G  GE+G  G +G  G+ G  G  G P
Sbjct: 187 GEAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQKGEQGFEGSKGETGEKGEQGEKGDP 246

Query: 263 AICAYKRES 271
           A+     E+
Sbjct: 247 ALAGLNGEN 255


>gi|211700|gb|AAA48736.1| type X collagen, partial [Gallus gallus]
          Length = 608

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/115 (50%), Positives = 69/115 (60%), Gaps = 3/115 (2%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GP G+PG+ G  GP+G+MG  G +G+PG+ G  GPKGDMG  G  G  G  G  G PGLD
Sbjct: 245 GPAGVPGELGPAGPQGNMGPQGLKGLPGENGLPGPKGDMGPVGPAGFPGAKGERGLPGLD 304

Query: 209 GIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G  G+PG     GLPG+ G  G  G  G  G  GP+G +G  GING PG
Sbjct: 305 GKPGYPGEQGLPGPKGHPGLPGQKGDTGHAGHPGLPGPVGPQGVKGVPGINGEPG 359



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 82/157 (52%), Gaps = 18/157 (11%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG-PK- 184
           +G  GV GE G  G  G +GP G +G+PG+ G  GPKGDMG  GP G PG +G+RG P  
Sbjct: 244 QGPAGVPGELGPAGPQGNMGPQGLKGLPGENGLPGPKGDMGPVGPAGFPGAKGERGLPGL 303

Query: 185 -GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G  GYPG  GL G  G PG PG  G  G  G  G+PG  G  G  G+PG NG  G +G 
Sbjct: 304 DGKPGYPGEQGLPGPKGHPGLPGQKGDTGHAGHPGLPGPVGPQGVKGVPGINGEPGPRGP 363

Query: 244 TGPRGNR---------------GKSGINGVPGTPAIC 265
           +G  G R               G++G  G+PG   I 
Sbjct: 364 SGIPGVRGPIGPPGMPGAPGAKGEAGAPGLPGPAGIV 400



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 89/219 (40%), Gaps = 68/219 (31%)

Query: 112 PGLQGP--------IGQKGEIGAKGEMGVKGERGEKGAPGVV------------------ 145
           PG QGP        IG+ GE G  G+ G+KG+RG  GA G                    
Sbjct: 124 PGPQGPQGLPGSAGIGKPGENGLPGQPGMKGDRGLPGARGEAGIPGPQGPPGEPGEVGIG 183

Query: 146 -----------------GPPGPQGIPGDEGKRGPKGDMGYPG------------------ 170
                            G PGP G+PG  G  G  G  G PG                  
Sbjct: 184 KPGPMGPPGPAGIPGAKGLPGPAGLPGSPGLPG-FGKPGLPGMKGHRGPEGPPGFPGPKG 242

Query: 171 ---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
              P G+PG+ G  GP+G+MG  G  GL G +GLPG  G  G  G  G  G  G+ GLPG
Sbjct: 243 DQGPAGVPGELGPAGPQGNMGPQGLKGLPGENGLPGPKGDMGPVGPAGFPGAKGERGLPG 302

Query: 228 KD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            D   G PG  G  G KG  G  G +G +G  G PG P 
Sbjct: 303 LDGKPGYPGEQGLPGPKGHPGLPGQKGDTGHAGHPGLPG 341



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 74/184 (40%), Gaps = 70/184 (38%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR--IGLDGRDGLPG 203
           GPPG +G PG  G  G KG+MG+ G  G PG+ G  GP+G  G PG   IG  G +GLPG
Sbjct: 90  GPPGEKGEPGVPGINGQKGEMGF-GVPGRPGNRGLPGPQGPQGLPGSAGIGKPGENGLPG 148

Query: 204 EPGLDG---IPGRNG-----------------------------------MDGIPGKDGL 225
           +PG+ G   +PG  G                                     G+PG  GL
Sbjct: 149 QPGMKGDRGLPGARGEAGIPGPQGPPGEPGEVGIGKPGPMGPPGPAGIPGAKGLPGPAGL 208

Query: 226 PGKDGIPGTN-----------------------------GTNGEKGMTGPRGNRGKSGIN 256
           PG  G+PG                               G  GE G  GP+GN G  G+ 
Sbjct: 209 PGSPGLPGFGKPGLPGMKGHRGPEGPPGFPGPKGDQGPAGVPGELGPAGPQGNMGPQGLK 268

Query: 257 GVPG 260
           G+PG
Sbjct: 269 GLPG 272



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 85/201 (42%), Gaps = 66/201 (32%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--MGYPGPQ 172
           +GP G+KGE G  G   + G++GE G  GV G PG +G+PG +G +G  G   +G PG  
Sbjct: 89  RGPPGEKGEPGVPG---INGQKGEMGF-GVPGRPGNRGLPGPQGPQGLPGSAGIGKPGEN 144

Query: 173 GIPGDEGKRGPKGDMGYPGR--------------------------------------IG 194
           G+PG  G    KGD G PG                                        G
Sbjct: 145 GLPGQPGM---KGDRGLPGARGEAGIPGPQGPPGEPGEVGIGKPGPMGPPGPAGIPGAKG 201

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---------------PGKDGIPGTNGTNG 239
           L G  GLPG PGL G     G  G+PG  G                 G  G+PG  G  G
Sbjct: 202 LPGPAGLPGSPGLPGF----GKPGLPGMKGHRGPEGPPGFPGPKGDQGPAGVPGELGPAG 257

Query: 240 EKGMTGPRGNRGKSGINGVPG 260
            +G  GP+G +G  G NG+PG
Sbjct: 258 PQGNMGPQGLKGLPGENGLPG 278



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 42/136 (30%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGK-----------------------------RG 182
           G+PG  G+RG  G+ G  GP G+PG  G                              RG
Sbjct: 31  GLPGKPGERGLNGEKGEAGPVGLPGARGPQGPPGIPGPAGLSVLGKPGPQGPPGAQGPRG 90

Query: 183 PKGDMGYPGRIGLDGRDG-----LPGEPGLDGIPGRNGMDGIPGKDGL--PGKDGIPG-- 233
           P G+ G PG  G++G+ G     +PG PG  G+PG  G  G+PG  G+  PG++G+PG  
Sbjct: 91  PPGEKGEPGVPGINGQKGEMGFGVPGRPGNRGLPGPQGPQGLPGSAGIGKPGENGLPGQP 150

Query: 234 -TNGTNGEKGMTGPRG 248
                 G++G+ G RG
Sbjct: 151 GM---KGDRGLPGARG 163


>gi|449483545|ref|XP_002190448.2| PREDICTED: collagen alpha-1(IV) chain [Taeniopygia guttata]
          Length = 1653

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 85/163 (52%), Gaps = 16/163 (9%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
            QKG +G   EMG+ G  GEKG PGV G PG  G PG +G++G KG  G+PG  G PG  G
Sbjct: 993  QKGSVG---EMGLPGTPGEKGLPGVPGSPGTPGFPGQKGEKGDKGAPGFPG-IGFPGAPG 1048

Query: 180  KRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGRNGMDGIPGK------DGLPG 227
            ++G  G  G PG  G  G        G+PG PG  G PG  G  G PG+       GLPG
Sbjct: 1049 EKGEPGRTGSPGVSGDKGEKGSAGIPGMPGAPGPKGSPGMAGFPGNPGRHGEKGEKGLPG 1108

Query: 228  KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
              GIPG  G  GE G+ GP G  G+ G  G  G P     K E
Sbjct: 1109 LSGIPGLKGEPGEPGVPGPAGTIGQKGEPGYDGIPGAAGAKGE 1151



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 94/186 (50%), Gaps = 20/186 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  G  G+KGE G  G  GV G++GEKG+          GIPG  G  GPKG    PG  
Sbjct: 1042 GFPGAPGEKGEPGRTGSPGVSGDKGEKGS---------AGIPGMPGAPGPKGS---PGMA 1089

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G PG+ G+ G KG+ G PG  G+ G  G PGEPG+ G  G  G  G PG DG+PG  G  
Sbjct: 1090 GFPGNPGRHGEKGEKGLPGLSGIPGLKGEPGEPGVPGPAGTIGQKGEPGYDGIPGAAGAK 1149

Query: 233  GTNGTNGEK-----GMTGPRGNRGKSGINGVPGTPAICAYKRESC-SLLPNSETSQLLIP 286
            G  G  G       G  G +G +G+ G  G PG+P I   K E   +  P  + SQ L  
Sbjct: 1150 GEQGLPGRGLPGFPGAKGDKGAKGEVGFPGSPGSPGIPGLKGEPGYAGPPGPKGSQGL-- 1207

Query: 287  PTIVGS 292
            P + GS
Sbjct: 1208 PGLPGS 1213



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 86/183 (46%), Gaps = 52/183 (28%)

Query: 113 GLQGPIGQKGEIGA---------------------KGEMGVKGERGEKGAPGVVGPPGPQ 151
           G QGP G+KGE G                      KGE G  GE+GE+G+PG+ G     
Sbjct: 198 GFQGPKGEKGEQGVRGPPGPPGPAPHMKEKGSEIIKGEKGDPGEKGERGSPGMPG----- 252

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                 G +G KGD G PGP+G PG +G+ G KG+ G PG  G+ GR   PGEPGL G  
Sbjct: 253 -----SGFKGDKGDPGQPGPRGKPGKDGEPGLKGEPGLPGGFGIPGR---PGEPGLKGDK 304

Query: 212 GRNGMDGIPGK------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G  G  G PG+             G PG  G+PG  G  GEKG        G  GI G P
Sbjct: 305 GERGYPGPPGRMIDTGPVDTFGEKGDPGVSGLPGLKGQKGEKGFP------GAQGIPGPP 358

Query: 260 GTP 262
           G P
Sbjct: 359 GRP 361



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 93/188 (49%), Gaps = 35/188 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG QG +G KG  G KGEMGV G  G  G PG V   G +G PG++G +G KG +   GP
Sbjct: 848  PGPQGAVGLKGSTGPKGEMGVMGTPGLPGTPGPV---GDRGFPGEKGSQGFKGVI---GP 901

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLD-----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            QG PG +G +G  G  G PG + +D     G+ G  GE G  G  G  G+ G  G+ G+P
Sbjct: 902  QGEPGVKGDKGEAGLPGKPGEMDMDMVSLKGQKGDQGEKGDHGAAGEKGIRGDYGEPGIP 961

Query: 227  GKDGIPGT------------------------NGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            G+DG PGT                         G+ GE G+ G  G +G  G+ G PGTP
Sbjct: 962  GRDGEPGTPGQPGPKGDQGPPGYPGDPGVPGQKGSVGEMGLPGTPGEKGLPGVPGSPGTP 1021

Query: 263  AICAYKRE 270
                 K E
Sbjct: 1022 GFPGQKGE 1029



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 89/172 (51%), Gaps = 20/172 (11%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G KG+ G  GE+G +G  G  G PG  G PG  G+ GPKGD G PG  G PG  
Sbjct: 932  GQKGDQGEKGDHGAAGEKGIRGDYGEPGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGVP 991

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--------------GMDGIPGKDG 224
            G++G  G+MG PG  G  G  G+PG PG  G PG+               G  G PG+ G
Sbjct: 992  GQKGSVGEMGLPGTPGEKGLPGVPGSPGTPGFPGQKGEKGDKGAPGFPGIGFPGAPGEKG 1051

Query: 225  LPGKDGIPGTNGTNGEK------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             PG+ G PG +G  GEK      GM G  G +G  G+ G PG P     K E
Sbjct: 1052 EPGRTGSPGVSGDKGEKGSAGIPGMPGAPGPKGSPGMAGFPGNPGRHGEKGE 1103



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/127 (46%), Positives = 69/127 (54%), Gaps = 17/127 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDEGKRGP 162
            PG  G  G+KGE G  G  G+ G +GE G PGV GP         PG  GIPG  G    
Sbjct: 1092 PGNPGRHGEKGEKGLPGLSGIPGLKGEPGEPGVPGPAGTIGQKGEPGYDGIPGAAGA--- 1148

Query: 163  KGDMGYPGPQ--GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            KG+ G PG    G PG +G +G KG++G+PG  G  G  GL GEPG  G PG  G  G+P
Sbjct: 1149 KGEQGLPGRGLPGFPGAKGDKGAKGEVGFPGSPGSPGIPGLKGEPGYAGPPGPKGSQGLP 1208

Query: 221  GKDGLPG 227
               GLPG
Sbjct: 1209 ---GLPG 1212



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 78/150 (52%), Gaps = 14/150 (9%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G KG+ G  G+ G  G+ G+ G PGPQG  G +G  GPKG+MG     G PG  G  GP 
Sbjct: 825 GPKGDKGSPGQPGVPGSVGLPGLPGPQGAVGLKGSTGPKGEMGV---MGTPGLPGTPGPV 881

Query: 185 GDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGK--------DGLPGKDGIPG 233
           GD G+PG  G  G  G+    GEPG+ G  G  G+ G PG+         G  G  G  G
Sbjct: 882 GDRGFPGEKGSQGFKGVIGPQGEPGVKGDKGEAGLPGKPGEMDMDMVSLKGQKGDQGEKG 941

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            +G  GEKG+ G  G  G  G +G PGTP 
Sbjct: 942 DHGAAGEKGIRGDYGEPGIPGRDGEPGTPG 971



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 84/158 (53%), Gaps = 31/158 (19%)

Query: 119 GQKGEIGAKGEMG--------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           G+KG+ G KGE G         KG++G+ G       PGP+G PG +G+ G KG+ G PG
Sbjct: 234 GEKGDPGEKGERGSPGMPGSGFKGDKGDPGQ------PGPRGKPGKDGEPGLKGEPGLPG 287

Query: 171 PQGIPGDEGK---RGPKGDMGYPGRIG--LD-------GRDGLPGEPGLDGIPGRNGMDG 218
             GIPG  G+   +G KG+ GYPG  G  +D       G  G PG  GL G+ G+ G  G
Sbjct: 288 GFGIPGRPGEPGLKGDKGERGYPGPPGRMIDTGPVDTFGEKGDPGVSGLPGLKGQKGEKG 347

Query: 219 IPGKDGLPGKDGIP-----GTNGTNGEKGMTGPRGNRG 251
            PG  G+PG  G P     G+ G  GE+G  G +G+ G
Sbjct: 348 FPGAQGIPGPPGRPVPDRVGSPGVPGERGEKGEKGSPG 385



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 4/109 (3%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G+PG   +PG +   GPKGD G PG+ G+ G  GLPG PG  G  G  G  G  G+
Sbjct: 810 KGERGFPG---VPGLD-MPGPKGDKGSPGQPGVPGSVGLPGLPGPQGAVGLKGSTGPKGE 865

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G+ G  G+PGT G  G++G  G +G++G  G+ G  G P +   K E+
Sbjct: 866 MGVMGTPGLPGTPGPVGDRGFPGEKGSQGFKGVIGPQGEPGVKGDKGEA 914



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/138 (42%), Positives = 75/138 (54%), Gaps = 26/138 (18%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            G+KG+ G  G  G+KG++GEKG PG       QGIPG  G+  P   +G P   G+PG+
Sbjct: 325 FGEKGDPGVSGLPGLKGQKGEKGFPGA------QGIPGPPGRPVPD-RVGSP---GVPGE 374

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEP-------------GLDGIPGRNGMDGIPGKDG 224
            G++G KG  G+P   G+ GRDG PG P             G+D    + G  G PG  G
Sbjct: 375 RGEKGEKGSPGFP-SPGIPGRDGFPGPPGLPGPPGPPGKTDGIDQC--QQGEPGAPGSPG 431

Query: 225 LPGKDGIPGTNGTNGEKG 242
           LPG+DG PG  G  GEKG
Sbjct: 432 LPGRDGFPGEMGEKGEKG 449



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 63/128 (49%), Gaps = 23/128 (17%)

Query: 166 MGYPGPQGIPGD----EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           MG PGP+G PGD       +G KGD G+PG+ G+ GR+G PG+   DG PG  G  G  G
Sbjct: 506 MGSPGPKGEPGDFTYDSILKGEKGDPGFPGQPGIPGREGRPGK---DGFPGPQGPKGAAG 562

Query: 222 KDGLP---------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
             GL                G+ G PG  G  G  G+ G +G+RG +G  G+PG P    
Sbjct: 563 TAGLKGERGPPGQPGFPGVRGERGFPGPPGI-GTAGLPGEKGDRGFAGTPGLPGLPGAKG 621

Query: 267 YKRESCSL 274
               + SL
Sbjct: 622 EAGRTISL 629



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 84/208 (40%), Gaps = 71/208 (34%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------GDM 166
           G+KG+ G  G+ G+ G  G  G  G  GP GP+G  G  G +G +            G+ 
Sbjct: 526 GEKGDPGFPGQPGIPGREGRPGKDGFPGPQGPKGAAGTAGLKGERGPPGQPGFPGVRGER 585

Query: 167 GYPGPQGI-----PGDEGKRGPKGDMGYPGRIGLDGRDG----LPGEPGLD--------- 208
           G+PGP GI     PG++G RG  G  G PG  G  G  G    LPG PG D         
Sbjct: 586 GFPGPPGIGTAGLPGEKGDRGFAGTPGLPGLPGAKGEAGRTISLPGPPGADGLPGPPGFP 645

Query: 209 ------GIPGRNGMDGIPGKDGL--------------------PGKDGIPGTNGTNGEKG 242
                 G PG  G  G+PG+ G                     PG  G+PGT GT     
Sbjct: 646 GPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFQGQPGSPGLPGTPGT----- 700

Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRE 270
                      G++G+PG P +   K E
Sbjct: 701 ----------PGLDGLPGVPGLQGQKGE 718



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 90/230 (39%), Gaps = 88/230 (38%)

Query: 121 KGEIGAKGEMGVKGERG--------------------EKGAPGVVGPPGP------QGIP 154
           KG  G  G  G+ GE+G                    + G+PG+ G PG        G+P
Sbjct: 651 KGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFQGQPGSPGLPGTPGTPGLDGLPGVP 710

Query: 155 GDEGKRG-----------------------PKGDMGYP---GPQGIPGDEGKRGPKGDMG 188
           G +G++G                        KG  G P   G QG PG  G++G +GD G
Sbjct: 711 GLQGQKGEPGVGLPGPKGLPGPPGPAGIPGEKGSPGLPGLRGEQGFPGIPGQQGFRGDPG 770

Query: 189 YPGRIGLD--------------------------------GRDGLPGEPGLDGIPGRNGM 216
            PG  GL                                 G  G PG PGLD +PG  G 
Sbjct: 771 LPGLQGLQGPPGAPGLGPPGLPGPAGQPGPQGPPGFPGVKGERGFPGVPGLD-MPGPKGD 829

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPA 263
            G PG+ G+PG  G+PG  G  G    KG TGP+G  G  G  G+PGTP 
Sbjct: 830 KGSPGQPGVPGSVGLPGLPGPQGAVGLKGSTGPKGEMGVMGTPGLPGTPG 879


>gi|149025956|gb|EDL82199.1| rCG28740, isoform CRA_d [Rattus norvegicus]
          Length = 461

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 95/184 (51%), Gaps = 21/184 (11%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GP GQKG IGA G  G+ G++GE G PG  G    PGP+G PG+EG+   KGD G  GP+
Sbjct: 236 GPPGQKGSIGAPGTPGMDGQKGEPGLPGAAGQSGLPGPKGEPGNEGE---KGDAGENGPK 292

Query: 173 GIPGDEGKRG--PKGDMGYPGRIGLDGRDG------------LPGEPGLDGIPGRNGMDG 218
           G  G++G  G    G  G PG  G  G+ G            + GEPG  G  G  G+ G
Sbjct: 293 GDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPG 352

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
           +PG  G  G+ G PG  G  G+ G  GP+G +G+SG  G  G+      K +S +L P  
Sbjct: 353 LPGTKGERGEAGPPG-RGERGDPGAPGPKGKQGESGARGPKGSKGDRGDKGDSGALGPRG 411

Query: 279 ETSQ 282
              Q
Sbjct: 412 PPGQ 415



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 79/169 (46%), Gaps = 25/169 (14%)

Query: 127 KGEMGVKGERGEKGAPGVVG--------PPGPQG---------------IPGDEGKRGPK 163
           KGE G +G RG  G P V            G QG                PGD GK GP+
Sbjct: 155 KGEQGDQGPRGLPGFPTVAALHSNQILTVKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPR 214

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG  G PG++G  GP G  G  G IG  G  G+ G+ G  G+PG  G  G+PG  
Sbjct: 215 GMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGTPGMDGQKGEPGLPGAAGQSGLPGPK 274

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKS--GINGVPGTPAICAYKRE 270
           G PG +G  G  G NG KG TG +G+ G S  GI G PG       K E
Sbjct: 275 GEPGNEGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGE 323



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 47/91 (51%), Gaps = 10/91 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     E   PGL G  G++GE G  G       RGE+G PG    PGP+G  G+ G R
Sbjct: 340 GFIGPQGEPGLPGLPGTKGERGEAGPPG-------RGERGDPGA---PGPKGKQGESGAR 389

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           GPKG  G  G +G  G  G RGP G  G PG
Sbjct: 390 GPKGSKGDRGDKGDSGALGPRGPPGQKGDPG 420



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 61/134 (45%), Gaps = 34/134 (25%)

Query: 113 GLQGPIGQKGEIGAKGE--MGVKGERGE---------------------KGAPGVVGP-- 147
           G  GP G  GE G  G    G+KGE GE                     KG PG +GP  
Sbjct: 287 GENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQG 346

Query: 148 -PGPQGIPGDEGK--------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            PG  G+PG +G+        RG +GD G PGP+G  G+ G RGPKG  G  G  G  G 
Sbjct: 347 EPGLPGLPGTKGERGEAGPPGRGERGDPGAPGPKGKQGESGARGPKGSKGDRGDKGDSGA 406

Query: 199 DGLPGEPGLDGIPG 212
            G  G PG  G PG
Sbjct: 407 LGPRGPPGQKGDPG 420



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 45/90 (50%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G+PG PG  G PG  G+ G  G  G  G  G PGT G +G+KG  G  G  G+
Sbjct: 208 TGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGTPGMDGQKGEPGLPGAAGQ 267

Query: 253 SGINGVPGTPAICAYKRESCSLLPNSETSQ 282
           SG+ G  G P     K ++    P  +T +
Sbjct: 268 SGLPGPKGEPGNEGEKGDAGENGPKGDTGE 297


>gi|11875612|gb|AAG40729.1| type IV collagen alpha 1 chain precursor [Hydra vulgaris]
          Length = 1723

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 91/165 (55%), Gaps = 12/165 (7%)

Query: 108 EYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           + CP G QG     GQ G  GA GE G KG+ G+ G  G VG PG  G+ G +G  G KG
Sbjct: 523 KSCPSGPQGEKGVAGQDGLPGANGEKGDKGDEGKPGLEGSVGDPGESGLTGPQGPIGEKG 582

Query: 165 DMGYPGPQG-------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           D G  G +G       + G+ G++G  G  G PG IG  G  G+PG+PG DG  G  G+ 
Sbjct: 583 DTGAKGNKGERGSDRIVQGERGEKGTDGMPGSPGSIGFKGEQGVPGDPGTDGPQGPQGLQ 642

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGP--RGNRGKSGINGVPG 260
           G  G  G PGK GIPG NG  GEKG  G   RG +G+ G +G PG
Sbjct: 643 GPQGDRGAPGKSGIPGNNGEKGEKGNKGDGLRGFKGERGRDGEPG 687



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 110/227 (48%), Gaps = 48/227 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   +G      E  P G QGP+G+ G  G      +KG++G+KG  G  GPPGPQG   
Sbjct: 673 LRGFKGERGRDGEPGPKGSQGPMGKPGPKGEPFSTALKGQQGDKGDVGSEGPPGPQGA-- 730

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP------GRIGLDGRDG--------- 200
            EG+ G +G  G PG +G PG  G++G KGD G P      G  G DG+DG         
Sbjct: 731 -EGQVGNQGFKGEPGLRGAPGS-GEKGEKGDAGTPGIAGKNGENGKDGQDGPKGDKGEKG 788

Query: 201 ----------LPGEPGLDGIPGRNGMDGIPGKD---GLPGKD------------GIPGTN 235
                     + GEPGL G PG+ G+DG PGK    G PG+D            G PG +
Sbjct: 789 LQGPIGISGPIKGEPGLKGDPGKPGLDGAPGKSVPKGEPGRDGKDGDPGAKGEPGTPGES 848

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
           G +GEKG  GP+G +G  G  G     ++   K E+ ++    ET Q
Sbjct: 849 GRDGEKGEIGPQGPQGDKGDQGQ----SVIGPKGETGAIGKKGETGQ 891



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 102/200 (51%), Gaps = 42/200 (21%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   +  +  P G  G  G+ G+ GAKGE G  GE G  G  G +GP GPQG  GD+G+ 
Sbjct: 813  GLDGAPGKSVPKGEPGRDGKDGDPGAKGEPGTPGESGRDGEKGEIGPQGPQGDKGDQGQS 872

Query: 161  --GPKGDMGYPGPQGIPGDEG--------KRGPKGDMGYPGR--IGLDG---RDGLPGEP 205
              GPKG+ G  G +G  G +G        K+G  G+ G  G   +GL G     G PGE 
Sbjct: 873  VIGPKGETGAIGKKGETGQDGLKGRDGIGKQGANGEKGEKGNSVVGLPGDPGEKGSPGEK 932

Query: 206  GLDGI---------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---------- 246
            G DGI         PG++G+DG PGKDGLPG    PG  G  GEKG+TGP          
Sbjct: 933  GKDGISGKQGKPGPPGKDGVDGTPGKDGLPGN---PGPEGPKGEKGVTGPTGLDGEKGEP 989

Query: 247  -----RGNRGKSGINGVPGT 261
                 +G +G++G+ G PG 
Sbjct: 990  GYSGQKGAKGETGVRGKPGA 1009



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 89/203 (43%), Gaps = 56/203 (27%)

Query: 111  PPGLQGPIGQKGEIGAKG--------EMGVKGERGEKGAP--GVVGPPGPQGIPGDEGKR 160
            P G  G IG+KGE G  G        + G  GE+GEKG    G+ G PG +G PG++GK 
Sbjct: 876  PKGETGAIGKKGETGQDGLKGRDGIGKQGANGEKGEKGNSVVGLPGDPGEKGSPGEKGKD 935

Query: 161  GPKGDMGYPGP------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  G  G PGP             G+PG+ G  GPKG+ G  G  GLDG  G PG  G  
Sbjct: 936  GISGKQGKPGPPGKDGVDGTPGKDGLPGNPGPEGPKGEKGVTGPTGLDGEKGEPGYSGQK 995

Query: 209  GIPGRNGMDGIP----------------GKDGLPGKDGIPGTNGTNGEK----------- 241
            G  G  G+ G P                G  G PGK G PG  G  GEK           
Sbjct: 996  GAKGETGVRGKPGATSNVMGPKGNRGESGAKGEPGKQGPPGAEGPQGEKGERGIGTDKGT 1055

Query: 242  -------GMTGPRGNRGKSGING 257
                   G+ GP+G RG+ G  G
Sbjct: 1056 KGDTGDIGLQGPKGERGERGEQG 1078



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 91/183 (49%), Gaps = 41/183 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMG-------VKGERGEKG------APGVVGPPGPQGIPGD--- 156
           G QGPIG+KG+ GAKG  G       V+GERGEKG      +PG +G  G QG+PGD   
Sbjct: 573 GPQGPIGEKGDTGAKGNKGERGSDRIVQGERGEKGTDGMPGSPGSIGFKGEQGVPGDPGT 632

Query: 157 ------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
                 +G +GP+GD G PG  GIPG+ G++G KG+ G          DGL G  G  G 
Sbjct: 633 DGPQGPQGLQGPQGDRGAPGKSGIPGNNGEKGEKGNKG----------DGLRGFKGERGR 682

Query: 211 PGRNGMDGIPGKDGLPGKDGIP---------GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G  G  G PG  G P         G  G  G +G  GP+G  G+ G  G  G 
Sbjct: 683 DGEPGPKGSQGPMGKPGPKGEPFSTALKGQQGDKGDVGSEGPPGPQGAEGQVGNQGFKGE 742

Query: 262 PAI 264
           P +
Sbjct: 743 PGL 745



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 87/167 (52%), Gaps = 22/167 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVK--GERGEKGAPGVVGPPGP---------------QGIPG 155
           G  GP G +GE GA+G+  +   GERG+KG  G+ GPPG                QG  G
Sbjct: 197 GRMGPQGLRGEKGARGDSNITIFGERGDKGDIGLPGPPGRDCNGSSVTGELITNIQGPKG 256

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           ++GK+G +G  G PG  G  G+ G+ G KG+ G  G IG  G  G+ GE G  G  G  G
Sbjct: 257 EQGKKGDQGQKGEPGQPGQAGEAGQDGQKGEKGDKGEIGSAGPSGIQGEKGDIGATGAAG 316

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG--INGVPG 260
             G PG D   G  G PG  G +G KG  GP G+RGK G  I G PG
Sbjct: 317 TKGEPGSD---GSLGSPGQKGDHGTKGSEGPVGDRGKQGESITGPPG 360



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 98/230 (42%), Gaps = 58/230 (25%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--VVGPPGPQG- 152
           L  ++G    T     PG  G  G KG IG  G+ G  G +GE G PG  V G PG  G 
Sbjct: 397 LKGLKGEIGMTGPSGEPGKTGAEGMKGPIGPAGQRGETGSKGESGRPGQSVQGSPGMDGN 456

Query: 153 ---------------------------------IPGDEGKRGPKGDMGYPGPQGIPGDEG 179
                                            +PG  G +GP+G  G  GPQG PG   
Sbjct: 457 PGQIGPPGEPGIPGFPGPPGNPGQVVNDLGETVLPGPPGDQGPQGIQGVAGPQGSPG--- 513

Query: 180 KRGPKGDM------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            RG KGD       G  G  G+ G+DGLPG  G  G  G  G  G+ G  G PG+ G+ G
Sbjct: 514 IRGDKGDACKSCPSGPQGEKGVAGQDGLPGANGEKGDKGDEGKPGLEGSVGDPGESGLTG 573

Query: 234 TNGTNGEKGMTGPRGN-------------RGKSGINGVPGTPAICAYKRE 270
             G  GEKG TG +GN             RG+ G +G+PG+P    +K E
Sbjct: 574 PQGPIGEKGDTGAKGNKGERGSDRIVQGERGEKGTDGMPGSPGSIGFKGE 623



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 86/175 (49%), Gaps = 40/175 (22%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGE-------MGVKGERGEKGA---PGVVGPPGPQGIPGDE 157
            E   PG  G  G KGE G +G+       MG KG RGE GA   PG  GPPG +G  G++
Sbjct: 985  EKGEPGYSGQKGAKGETGVRGKPGATSNVMGPKGNRGESGAKGEPGKQGPPGAEGPQGEK 1044

Query: 158  GKRG------------------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G+RG                  PKG+ G  G QG  GD+G  GPKGD+G PG  G  G  
Sbjct: 1045 GERGIGTDKGTKGDTGDIGLQGPKGERGERGEQGRKGDQGPIGPKGDVGEPGPAGSIGNT 1104

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G+            +G DG  G+ G PG  G PG+ G+ G KG  G +G +G+ G
Sbjct: 1105 GI------------SGNDGPKGESGPPGIKGEPGSVGSIGPKGSKGEQGEKGERG 1147



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 84/162 (51%), Gaps = 17/162 (10%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GP+G+K   G  GE G KG++G+ G  G  G  G +G+PG +G+   KG+ G  GP+G+ 
Sbjct: 1180 GPLGEKPTKGEPGEDGPKGDKGDIGETGSQGTKGEKGVPGSKGE---KGEQGLEGPKGLE 1236

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            G  G  G KGD G  G IG  G  G  GE GL G  G  G  GI GK+G PG++G  G  
Sbjct: 1237 GRVGLAGSKGDKGIKGVIGKPGPTGDKGEKGLQGFKGDTGPQGIQGKEGEPGREGAKGLK 1296

Query: 236  GTNGEKGMTGP--------------RGNRGKSGINGVPGTPA 263
            G  G +G  GP              RG +G++G  G  G P 
Sbjct: 1297 GEVGAEGKMGPPCDAGATIIGEKGDRGEKGEAGQRGYKGEPG 1338



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 78/149 (52%), Gaps = 5/149 (3%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
            E  P G +G IG+ G  G KGE GV G +GEKG  G+    GP+G+ G  G  G KGD G
Sbjct: 1193 EDGPKGDKGDIGETGSQGTKGEKGVPGSKGEKGEQGLE---GPKGLEGRVGLAGSKGDKG 1249

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
              G  G PG  G +G KG  G+ G  G  G  G  GEPG +G  G  G  G  GK G P 
Sbjct: 1250 IKGVIGKPGPTGDKGEKGLQGFKGDTGPQGIQGKEGEPGREGAKGLKGEVGAEGKMGPPC 1309

Query: 228  KDG--IPGTNGTNGEKGMTGPRGNRGKSG 254
              G  I G  G  GEKG  G RG +G+ G
Sbjct: 1310 DAGATIIGEKGDRGEKGEAGQRGYKGEPG 1338



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 88/169 (52%), Gaps = 18/169 (10%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
              +G   S  E    GL+GP G +G +      G+ G +G+KG  GV+G PGP G  G++
Sbjct: 1213 GEKGVPGSKGEKGEQGLEGPKGLEGRV------GLAGSKGDKGIKGVIGKPGPTGDKGEK 1266

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--GIPGRNG 215
            G +G KGD    GPQGI G EG+ G +G  G  G +G +G+ G P + G    G  G  G
Sbjct: 1267 GLQGFKGDT---GPQGIQGKEGEPGREGAKGLKGEVGAEGKMGPPCDAGATIIGEKGDRG 1323

Query: 216  MDGIPGKDGLPGKDGI-------PGTNGTNGEKGMTGPRGNRGKSGING 257
              G  G+ G  G+ G        PG  G  G++G+ G +GN G  GING
Sbjct: 1324 EKGEAGQRGYKGEPGPSSQLTINPGAKGEQGDRGIKGEKGNIGPKGING 1372



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 80/163 (49%), Gaps = 13/163 (7%)

Query: 112  PGLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGVVGPPGP-QGIPGDEGKRGPKG 164
            PG +GP G+KG  G       KGE G  G++G KG  GV G PG    + G +G RG  G
Sbjct: 965  PGPEGPKGEKGVTGPTGLDGEKGEPGYSGQKGAKGETGVRGKPGATSNVMGPKGNRGESG 1024

Query: 165  DMGYPGPQGIPGDEGKRGPKG------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
              G PG QG PG EG +G KG      D G  G  G  G  G  GE G  G  GR G  G
Sbjct: 1025 AKGEPGKQGPPGAEGPQGEKGERGIGTDKGTKGDTGDIGLQGPKGERGERGEQGRKGDQG 1084

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  G  G+ G  G+ G  G  G  GP+G  G  GI G PG+
Sbjct: 1085 PIGPKGDVGEPGPAGSIGNTGISGNDGPKGESGPPGIKGEPGS 1127



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 99/232 (42%), Gaps = 57/232 (24%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV---------KGERGEKGAPGV 144
            I L   +G      E    G QGPIG KG++G  G  G           G +GE G PG+
Sbjct: 1062 IGLQGPKGERGERGEQGRKGDQGPIGPKGDVGEPGPAGSIGNTGISGNDGPKGESGPPGI 1121

Query: 145  VGPPG------PQGIPGDEGKRGPKGD--------------------------------- 165
             G PG      P+G  G++G++G +G                                  
Sbjct: 1122 KGEPGSVGSIGPKGSKGEQGEKGERGSTLKGNPGPEGPRGPTGPPGPAGKDYILDLEVGP 1181

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLD---GIPGRNGM 216
            +G    +G PG++G +G KGD+G  G  G  G  G+P      GE GL+   G+ GR G+
Sbjct: 1182 LGEKPTKGEPGEDGPKGDKGDIGETGSQGTKGEKGVPGSKGEKGEQGLEGPKGLEGRVGL 1241

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  G  G+ G  G PG  G  GEKG+ G +G+ G  GI G  G P     K
Sbjct: 1242 AGSKGDKGIKGVIGKPGPTGDKGEKGLQGFKGDTGPQGIQGKEGEPGREGAK 1293



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 85/177 (48%), Gaps = 44/177 (24%)

Query: 119 GQKGEIGAK------GEMGVKGERGEKGAPGVVGPPGPQGIPGDEG-----------KRG 161
           GQKGE G K      G+ G KG++GE G  G +GP   QG+ G++G           +RG
Sbjct: 167 GQKGEPGPKSQDGPAGDPGTKGDKGESGKAGRMGP---QGLRGEKGARGDSNITIFGERG 223

Query: 162 PKGDMGYPGPQG---------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            KGD+G PGP G               I G +G++G KGD G         + G PG+PG
Sbjct: 224 DKGDIGLPGPPGRDCNGSSVTGELITNIQGPKGEQGKKGDQG---------QKGEPGQPG 274

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G++G  G  G  G  G  G  G  G  G+ G TG  G +G+ G +G  G+P 
Sbjct: 275 QAGEAGQDGQKGEKGDKGEIGSAGPSGIQGEKGDIGATGAAGTKGEPGSDGSLGSPG 331



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 88/188 (46%), Gaps = 40/188 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------EGKRGPK 163
           G +G  GQ G+ G  G+ G KGE+G+KG  G  GP G QG  GD         +G+ G  
Sbjct: 265 GQKGEPGQPGQAGEAGQDGQKGEKGDKGEIGSAGPSGIQGEKGDIGATGAAGTKGEPGSD 324

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGY--------PGRIGLDGRD---------------- 199
           G +G PG +G  G +G  GP GD G         PG+IG  G+                 
Sbjct: 325 GSLGSPGQKGDHGTKGSEGPVGDRGKQGESITGPPGQIGEKGQRGPEGKKGEPGPEGPPG 384

Query: 200 -----GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                G  G PGL G+ G  GM G  G+ G  G +G+ G  G  G++G TG +G  G+ G
Sbjct: 385 PNGEVGDTGPPGLKGLKGEIGMTGPSGEPGKTGAEGMKGPIGPAGQRGETGSKGESGRPG 444

Query: 255 --INGVPG 260
             + G PG
Sbjct: 445 QSVQGSPG 452



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 94/221 (42%), Gaps = 58/221 (26%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG---EMGV--------------------KG 134
             +QGF   T    P G+QG  G+ G  GAKG   E+G                     +G
Sbjct: 1267 GLQGFKGDT---GPQGIQGKEGEPGREGAKGLKGEVGAEGKMGPPCDAGATIIGEKGDRG 1323

Query: 135  ERGEKGAPGVVGPPGPQ-------GIPGDEGKRGPKGDMGYPGPQGIPGDEGK------R 181
            E+GE G  G  G PGP        G  G++G RG KG+ G  GP+GI G  GK       
Sbjct: 1324 EKGEAGQRGYKGEPGPSSQLTINPGAKGEQGDRGIKGEKGNIGPKGINGPFGKDGSIGPE 1383

Query: 182  GPKGDMGYPGRIGLDGRDGLPGEPGLDGIP-------------------GRNGMDGIPGK 222
            GPKGD G  G  GLDG  G  G+P +   P                   G  G  G PG+
Sbjct: 1384 GPKGDSGQKGETGLDGPKGEKGQPAIGTGPKGEKGDQGPPGPQGPQGDIGEKGDIGPPGE 1443

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  GI G  G  G KG TGP G +G  G+ G  G P 
Sbjct: 1444 TGDIGPQGIKGEFGIAGIKGETGPPGLQGPIGLKGDQGPPG 1484



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 64/116 (55%), Gaps = 16/116 (13%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGV-VGPPGPQGIP------------GDEGKRGP 162
            GP G KG+ G KGE G+ G +GEKG P +  GP G +G              G++G  GP
Sbjct: 1381 GPEGPKGDSGQKGETGLDGPKGEKGQPAIGTGPKGEKGDQGPPGPQGPQGDIGEKGDIGP 1440

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNG 215
             G+ G  GPQGI G+ G  G KG+ G P   G IGL G  G PG+ G  G PGR+G
Sbjct: 1441 PGETGDIGPQGIKGEFGIAGIKGETGPPGLQGPIGLKGDQGPPGDAGKVGPPGRSG 1496



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 92/213 (43%), Gaps = 65/213 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------------------QGIP 154
            GLQGP G++GE   +GE G KG++G  G  G VG PGP                   G P
Sbjct: 1063 GLQGPKGERGE---RGEQGRKGDQGPIGPKGDVGEPGPAGSIGNTGISGNDGPKGESGPP 1119

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG----------------------------D 186
            G +G+    G +G  GP+G  G++G++G +G                            D
Sbjct: 1120 GIKGE---PGSVGSIGPKGSKGEQGEKGERGSTLKGNPGPEGPRGPTGPPGPAGKDYILD 1176

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            +     +G  G     GEPG DG  G  G  G  G  G  G+ G+PG+ G  GE+G+ GP
Sbjct: 1177 L----EVGPLGEKPTKGEPGEDGPKGDKGDIGETGSQGTKGEKGVPGSKGEKGEQGLEGP 1232

Query: 247  R---------GNRGKSGINGVPGTPAICAYKRE 270
            +         G++G  GI GV G P     K E
Sbjct: 1233 KGLEGRVGLAGSKGDKGIKGVIGKPGPTGDKGE 1265



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 77/150 (51%), Gaps = 16/150 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
            PG +G  G +G  G KG +G KG  G  G  G +GP GP+G  G +G+    GPKG+ G 
Sbjct: 1347 PGAKGEQGDRGIKGEKGNIGPKGINGPFGKDGSIGPEGPKGDSGQKGETGLDGPKGEKGQ 1406

Query: 169  P----GPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            P    GP+G  GD+G           G KGD+G PG  G  G  G+ GE G+ GI G  G
Sbjct: 1407 PAIGTGPKGEKGDQGPPGPQGPQGDIGEKGDIGPPGETGDIGPQGIKGEFGIAGIKGETG 1466

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              G+ G  GL G  G PG  G  G  G +G
Sbjct: 1467 PPGLQGPIGLKGDQGPPGDAGKVGPPGRSG 1496


>gi|441629015|ref|XP_004089405.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-3(V) chain [Nomascus
            leucogenys]
          Length = 1706

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 86/172 (50%), Gaps = 27/172 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G QGP+G  GE G+ GE G  G  G+ G PG +GP GP G  G  G+ G KGD+G     
Sbjct: 1007 GSQGPVGPAGEKGSPGERGPPGPTGKDGIPGPLGPLGPSGAAGPSGEEGDKGDVG----- 1061

Query: 173  GIPGDEGKRGPKGDMGYPGRIGL------------DGRDGLPGEPGLDGIPGRNGMDGIP 220
              PG +G +G KGD G PG+ G+            DG  G  G PGL G  G +G+ G  
Sbjct: 1062 -APGHKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFV 1120

Query: 221  GKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPGTPA 263
            G  G PG  G+PG  G  GE          G  GPRG +G SG  G PG P 
Sbjct: 1121 GVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPSGSEGTPGLPG 1172



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 82/157 (52%), Gaps = 12/157 (7%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           ++GP G  G  G  G +G+ G  G KG  G  GP GP+G+ G  G  G  G MG PG  G
Sbjct: 478 MKGPPGPVGLTGRPGPVGLPGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGKMGRPGADG 537

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             G  G  GPKGD G+      DG  GLPGE G  G  G  G  G PG+DG  G +G PG
Sbjct: 538 ARGLPGDTGPKGDRGF------DGLPGLPGEKGQRGDFGHVGQPGPPGEDGERGAEGPPG 591

Query: 234 TNGTNGE---KGMTGPRGN---RGKSGINGVPGTPAI 264
             G  GE   +G+ GPRG+    G+ G+ G+ G P  
Sbjct: 592 PTGQAGEPGPRGLIGPRGSPGPTGRPGVTGIDGAPGA 628



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 79/152 (51%), Gaps = 9/152 (5%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KG  G +G  G KGE+GE G PG  G  G +G  G  G  GP+G+ G  GP+G  G  G+
Sbjct: 716 KGTSGNRGLQGEKGEKGEDGFPGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGQ 775

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLD---GIP------GRNGMDGIPGKDGLPGKDGI 231
            GP G  G  G++G+ G  G PG PG     G P      G  G  G  G+ GL G+ G 
Sbjct: 776 EGPPGSAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPIGEKGKLGKAGQPGLEGERGP 835

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG+ G  G+ G TG  G +G  G +G PG P 
Sbjct: 836 PGSRGERGQPGATGQPGPKGDVGQDGAPGIPG 867



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 100/229 (43%), Gaps = 80/229 (34%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQ---------GIPGD 156
            PG  GPIG+KG++G  G+ G++GERG      E+G PG  G PGP+         GIPG+
Sbjct: 809  PGPLGPIGEKGKLGKAGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGIPGE 868

Query: 157  EG------------------KRGPKGDMGYPG-----------------------PQGIP 175
            +G                   +G  G  G+PG                        QG+P
Sbjct: 869  KGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGELVMGPLGERGPPGPPGXPGEQGLP 928

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGL------------------------PGEPGLDGIP 211
            G EG+ G KGD+G PG +G +G  GL                        PG  G +G P
Sbjct: 929  GLEGREGAKGDLGPPGPLGKEGPAGLRGFPGPKGGPGDPGSTGLKGDKGPPGPVGANGSP 988

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G  GLPG+ G  G  G  GEKG  G RG  G +G +G+PG
Sbjct: 989  GERGPLGPAGGIGLPGQSGSQGPVGPAGEKGSPGERGPPGPTGKDGIPG 1037



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 78/160 (48%), Gaps = 24/160 (15%)

Query: 129  EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPKGDMGYPGP-- 171
            E G+ G  G +GA G +GPPGP G  G  G R               G KGD G PGP  
Sbjct: 924  EQGLPGLEGREGAKGDLGPPGPLGKEGPAGLRGFPGPKGGPGDPGSTGLKGDKGPPGPVG 983

Query: 172  -QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPG 227
              G PG+ G  GP G +G PG+ G  G  G  GE   PG  G PG  G DGIPG  G  G
Sbjct: 984  ANGSPGERGPLGPAGGIGLPGQSGSQGPVGPAGEKGSPGERGPPGPTGKDGIPGPLGPLG 1043

Query: 228  KDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAI 264
              G  G +G  G+K   G  G +G++G  G  G PG P I
Sbjct: 1044 PSGAAGPSGEEGDKGDVGAPGHKGSKGDKGDAGPPGQPGI 1083



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 83/169 (49%), Gaps = 33/169 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRG------PK 163
           G  GP+G  G  G KGE G +G +G +G  G  GPPG     G PG +G RG      PK
Sbjct: 489 GRPGPVGLPGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGKMGRPGADGARGLPGDTGPK 548

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---------PGEPGLDGIPGRN 214
           GD G+ G  G+PG++G+RG  G +G PG  G DG  G           GEPG  G+ G  
Sbjct: 549 GDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPRGLIGPR 608

Query: 215 GMDGIPGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRG 248
           G  G  G+ G+ G DG PG  G                +G +G+ GP+G
Sbjct: 609 GSPGPTGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQG 657



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 72/135 (53%), Gaps = 12/135 (8%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           V ++G         P G  GP G KG+ G  G+ G  G  GEKG  GV       G+PG 
Sbjct: 743 VGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGQEGPPGSAGEKGKLGV------PGLPGY 796

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G+ GPKG +G+PGP G  G++GK G       +G+ G PG  G  G+ G  G+PG  G 
Sbjct: 797 PGRPGPKGSIGFPGPLGPIGEKGKLGKAGQPGLEGERGPPGSRGERGQPGATGQPGPKGD 856

Query: 211 PGRNGMDGIPGKDGL 225
            G++G  GIPG+ GL
Sbjct: 857 VGQDGAPGIPGEKGL 871



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 77/181 (42%), Gaps = 45/181 (24%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G +G  G  G  G KG+ G +G  GV+GPPG QG+PG  G++G  GD+G  GP G PG  
Sbjct: 1097 GAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPR 1156

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPG-------------------------------- 206
            G +GP G  G PG  G  G+ G  GE G                                
Sbjct: 1157 GPQGPSGSEGTPGLPGGVGQPGAVGEKGEPGDAGDPGPPGAPGIPGPKGDIGEKGDSGPS 1216

Query: 207  -------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                          DG  G  G  G+PG  G PG  G+ G  G +GE    GP G RG S
Sbjct: 1217 GAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGPPGDPGVSGPPGASGEPVSPGPPGKRGPS 1276

Query: 254  G 254
            G
Sbjct: 1277 G 1277



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 84/174 (48%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V   G   S  E  PPG  G  G  G +G  G  G  G  GE+G  G VG PG +G  GD
Sbjct: 1012 VGPAGEKGSPGERGPPGPTGKDGIPGPLGPLGPSGAAGPSGEEGDKGDVGAPGHKGSKGD 1071

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            +G  GP G  G  GP G PG  G  G +G  G PG  G  G DG+ G  G+ G PG  G+
Sbjct: 1072 KGDAGPPGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGL 1131

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G PG+ G  G  G  G +G  G +G  GP G+ G  G+ G  G P     K E
Sbjct: 1132 PGPPGEKGEVGDVGSMGPHGAPGPRGPQGPSGSEGTPGLPGGVGQPGAVGEKGE 1185



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 88/228 (38%), Gaps = 81/228 (35%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ+G+ G  G+ G  GE GE+GA    GPPGP G  G+ G RG  G  G PGP
Sbjct: 557 PGLPGEKGQRGDFGHVGQPGPPGEDGERGA---EGPPGPTGQAGEPGPRGLIGPRGSPGP 613

Query: 172 QGIPGD---EGKRGPKGDM------------------GYPGRIGLDG------------- 197
            G PG    +G  G KG++                  G PG  GL G             
Sbjct: 614 TGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGI 673

Query: 198 -----RDGLPGEPG------------------------------------LDGIPGRNGM 216
                 DG PG PG                                    L G  G  G 
Sbjct: 674 PGLPGSDGPPGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGE 733

Query: 217 DGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           DG PG     GL G  G PG  G  GE G  GP+G  G++G  G PG+
Sbjct: 734 DGFPGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGQEGPPGS 781



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 72/171 (42%), Gaps = 45/171 (26%)

Query: 112 PGLQGPIGQKGEI------------------GAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           PG +GP G+KG                    G  G  G++GE+GEKG           G 
Sbjct: 686 PGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGE---------DGF 736

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG +G  G KGD G PG  G  G++G  GPKG  G  G+               +G PG 
Sbjct: 737 PGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGQ---------------EGPPGS 781

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G   K G+PG  G PG  G  G  G  GP G  G+ G  G  G P +
Sbjct: 782 AGEKG---KLGVPGLPGYPGRPGPKGSIGFPGPLGPIGEKGKLGKAGQPGL 829



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 66/148 (44%), Gaps = 24/148 (16%)

Query: 137 GEKGAPGVVGPPGPQG------------------IPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G PG  GP G +G                  + G  G RG +G+ G  G  G PG +
Sbjct: 681 GPPGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFK 740

Query: 179 GKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G KGD G PG  G  G D      G  G+ G +G PG  G  G  G  GLPG  G P
Sbjct: 741 GDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGQEGPPGSAGEKGKLGVPGLPGYPGRP 800

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G+ G  G  GP G +GK G  G PG
Sbjct: 801 GPKGSIGFPGPLGPIGEKGKLGKAGQPG 828



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 53/110 (48%), Gaps = 27/110 (24%)

Query: 120  QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPGPQGIPG 176
            + G  G+ G  G+ G+ G  G PGV GPPG  G    PG  GKRGP G MG  G      
Sbjct: 1230 EDGAKGSVGPTGLPGDLGPPGDPGVSGPPGASGEPVSPGPPGKRGPSGHMGREG------ 1283

Query: 177  DEGKRGPK---------------GDMGYPGRIGLDGRDGLPG---EPGLD 208
             EG++G K               G  G PGR+G +G  G+PG   EPGL 
Sbjct: 1284 REGEKGAKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGIPGPVGEPGLL 1333



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 87/220 (39%), Gaps = 69/220 (31%)

Query: 112  PGLQGPIGQKGEIGAKGE---------------------MGVKGERG------------- 137
            PGL G +GQ G +G KGE                     +G KG+ G             
Sbjct: 1168 PGLPGGVGQPGAVGEKGEPGDAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGP 1227

Query: 138  --EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGY 189
              E GA G V   GP G+PGD    GP GD G  GP G       PG  GKRGP G MG 
Sbjct: 1228 PGEDGAKGSV---GPTGLPGD---LGPPGDPGVSGPPGASGEPVSPGPPGKRGPSGHMGR 1281

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG---------- 239
             GR G  G  G PG  G  G  G  G  G PG+ G  G  GIPG  G  G          
Sbjct: 1282 EGREGEKGAKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGIPGPVGEPGLLGAPGQMGP 1341

Query: 240  -----------EKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                        KG  GP+G +G  G+ G+ G P     K
Sbjct: 1342 PGPLGPSGLPGLKGDAGPKGEKGHIGLIGLIGPPGEAGEK 1381


>gi|300810921|gb|ADK35755.1| collagen type I alpha 1 [Ctenopharyngodon idella]
          Length = 1448

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 76/154 (49%), Gaps = 21/154 (13%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDMGYPGPQGIPGDE 178
           G+ G  G KG+ G  GAPG  GPPG QG+PG+ G       +G +GD G  G  G PG +
Sbjct: 686 GSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAAGLPGLKGDRGDQGAKGTDGAPGKD 745

Query: 179 GKRG---------------PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G RG                KG+ G PG +G  G  G PGE G  G PG  G  G PG D
Sbjct: 746 GIRGMTGPIGPPGPAGAPGDKGETGAPGLVGPTGARGPPGERGETGAPGPAGFAGPPGAD 805

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GLPG  G  G NG  G+ G  GP G  G  G  G
Sbjct: 806 GLPGAKGEAGDNGAKGDAGSPGPAGATGAPGPQG 839



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 81/188 (43%), Gaps = 42/188 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGV------------------------------KGERGEKGAP 142
           G  GP G  GE G  GE GV                              +GE+G  G P
Sbjct: 566 GFPGPKGAAGEAGKPGERGVMGAVGATGAPGKDGDVGAPGAPGPAGPAGERGEQGPAGPP 625

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL- 201
           G  G PGPQG  G+ GK    G+ G PG  G PG  G R   GD G+PG  G  G  G  
Sbjct: 626 GFQGLPGPQGATGEPGK---SGEQGVPGEAGAPGPAGSR---GDRGFPGERGAPGPAGPA 679

Query: 202 -----PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                PG  G DG  G  G  G PG  G PG  G+PG  G  G  G+ G RG++G  G +
Sbjct: 680 GARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAAGLPGLKGDRGDQGAKGTD 739

Query: 257 GVPGTPAI 264
           G PG   I
Sbjct: 740 GAPGKDGI 747



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 82/184 (44%), Gaps = 36/184 (19%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGYPG------ 170
           ++GE G  G  G +G  G +GA G  G  G QG+PG+ G  GP   +GD G+PG      
Sbjct: 615 ERGEQGPAGPPGFQGLPGPQGATGEPGKSGEQGVPGEAGAPGPAGSRGDRGFPGERGAPG 674

Query: 171 ------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIP---GRNGMDG 218
                  +G PG  G  G KGD G PG  G  G  GL   PGE G  G+P   G  G  G
Sbjct: 675 PAGPAGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAAGLPGLKGDRGDQG 734

Query: 219 IPGKDGLPGKDGIPGT---------------NGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G DG PGKDGI G                 G  G  G+ GP G RG  G  G  G P 
Sbjct: 735 AKGTDGAPGKDGIRGMTGPIGPPGPAGAPGDKGETGAPGLVGPTGARGPPGERGETGAPG 794

Query: 264 ICAY 267
              +
Sbjct: 795 PAGF 798



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  GE GE GAPG +GP G  G PG  G+ G  G  G PG +G PG +G R      G+P
Sbjct: 188 GPPGEPGEAGAPGPMGPRGAAGPPGKNGEDGESGKPGRPGERGPPGPQGAR------GFP 241

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---GEKGMTGP 246
           G  GL G  G  G  GLDG  G  G  G  G+ G PG++G PG  G     GE+G  GP
Sbjct: 242 GTPGLPGIKGHRGFSGLDGAKGDTGPSGPKGEAGAPGENGTPGAMGPRGLPGERGRAGP 300



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 84/197 (42%), Gaps = 51/197 (25%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGK---RGPKGDMGY 168
           +G  G  G +G  G  G  GERGE GAPG     GPPG  G+PG +G+    G KGD G 
Sbjct: 766 KGETGAPGLVGPTGARGPPGERGETGAPGPAGFAGPPGADGLPGAKGEAGDNGAKGDAGS 825

Query: 169 PGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG---------------------- 197
           PGP G  G  G +GP         +G  G PG  G  G                      
Sbjct: 826 PGPAGATGAPGPQGPVGATGPKGARGAAGPPGATGFPGAAGRVGPPGPAGNAGPPGPPGP 885

Query: 198 --RDGLPGEPGLDGIPGRNG------------MDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             ++G  G  G  G  GR G              G PG +G  G  GIPG  G  G++G+
Sbjct: 886 GGKEGQKGNRGETGPAGRTGEVGAPGPPGAPGEKGTPGAEGPTGPAGIPGPQGIAGQRGI 945

Query: 244 TGPRGNRGKSGINGVPG 260
            G  G RG+ G  G+PG
Sbjct: 946 VGLPGQRGERGFPGLPG 962



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 82/181 (45%), Gaps = 45/181 (24%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMG 167
           P G  GP G  G  GAKGE G  G +G+ G+PG     G PGPQG  G  G +G +G  G
Sbjct: 795 PAGFAGPPGADGLPGAKGEAGDNGAKGDAGSPGPAGATGAPGPQGPVGATGPKGARGAAG 854

Query: 168 YPGPQGIPG------------------------DEGKRGPKGDMGYPGRI---------- 193
            PG  G PG                         EG++G +G+ G  GR           
Sbjct: 855 PPGATGFPGAAGRVGPPGPAGNAGPPGPPGPGGKEGQKGNRGETGPAGRTGEVGAPGPPG 914

Query: 194 --------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                   G +G  G  G PG  GI G+ G+ G+PG+ G  G  G+PG +G  G++G +G
Sbjct: 915 APGEKGTPGAEGPTGPAGIPGPQGIAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGPSG 974

Query: 246 P 246
           P
Sbjct: 975 P 975



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 60/114 (52%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
             GP G+ GE GA G MG +G  G  G  G  G  G  G PG+ G  GP+G  G+PG  G
Sbjct: 186 FTGPPGEPGEAGAPGPMGPRGAAGPPGKNGEDGESGKPGRPGERGPPGPQGARGFPGTPG 245

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
           +PG +G RG  G  G  G  G  G  G  G PG +G PG  G  G+PG+ G  G
Sbjct: 246 LPGIKGHRGFSGLDGAKGDTGPSGPKGEAGAPGENGTPGAMGPRGLPGERGRAG 299



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 81/200 (40%), Gaps = 60/200 (30%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---------------KRGPKGDM 166
           GE G  GE G+ G +G  G+PG    PGP G  G  G                RG  G M
Sbjct: 509 GEPGRNGEPGMPGSKGMTGSPGS---PGPDGKTGPSGTPGQDGRPGPPGPVGARGQPGVM 565

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG---------------------LPGEP 205
           G+PGP+G  G+ GK G +G MG  G  G  G+DG                       G P
Sbjct: 566 GFPGPKGAAGEAGKPGERGVMGAVGATGAPGKDGDVGAPGAPGPAGPAGERGEQGPAGPP 625

Query: 206 GLDGIPGRNGMDGIPGKDG---LPGKDGIPGTNGTNGEKGM------------------T 244
           G  G+PG  G  G PGK G   +PG+ G PG  G+ G++G                    
Sbjct: 626 GFQGLPGPQGATGEPGKSGEQGVPGEAGAPGPAGSRGDRGFPGERGAPGPAGPAGARGSP 685

Query: 245 GPRGNRGKSGINGVPGTPAI 264
           G  GN G  G  G PG P  
Sbjct: 686 GSAGNDGAKGDAGAPGAPGA 705



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 72/157 (45%), Gaps = 18/157 (11%)

Query: 98  AMQGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGVKG---------------ERGEK 139
            +QG          PGL+G     G KG  GA G+ G++G               ++GE 
Sbjct: 710 GLQGMPGERGAAGLPGLKGDRGDQGAKGTDGAPGKDGIRGMTGPIGPPGPAGAPGDKGET 769

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           GAPG+VGP G +G PG+ G+ G  G  G+ GP G  G  G +G  GD G  G  G  G  
Sbjct: 770 GAPGLVGPTGARGPPGERGETGAPGPAGFAGPPGADGLPGAKGEAGDNGAKGDAGSPGPA 829

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G PG  G  G  G  G  G  G PG  G PG  G
Sbjct: 830 GATGAPGPQGPVGATGPKGARGAAGPPGATGFPGAAG 866



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 83/224 (37%), Gaps = 81/224 (36%)

Query: 111  PPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPG---------------VVGPPGPQG 152
            PPG  G  G KGE G   AKG+ G  G  G  GAPG                 GPPG  G
Sbjct: 801  PPGADGLPGAKGEAGDNGAKGDAGSPGPAGATGAPGPQGPVGATGPKGARGAAGPPGATG 860

Query: 153  IPGDEG---------------------KRGPKGDMGYPGP------------------QG 173
             PG  G                     K G KG+ G  GP                  +G
Sbjct: 861  FPGAAGRVGPPGPAGNAGPPGPPGPGGKEGQKGNRGETGPAGRTGEVGAPGPPGAPGEKG 920

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG------ 227
             PG EG  GP G  G  G  G  G  GLPG+ G  G PG  G  G PGK G  G      
Sbjct: 921  TPGAEGPTGPAGIPGPQGIAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGPSGPSGERG 980

Query: 228  ------------------KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                              ++G PG  G+ G  G  GP+G+RG++
Sbjct: 981  PPGPMGPPGLAGPPGEPGREGTPGNEGSAGRDGAPGPKGDRGET 1024



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 70/158 (44%), Gaps = 36/158 (22%)

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGP 183
           +G PGV+G PGP+G  G+ GK G +G MG  G  G PG +G               +RG 
Sbjct: 559 RGQPGVMGFPGPKGAAGEAGKPGERGVMGAVGATGAPGKDGDVGAPGAPGPAGPAGERGE 618

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKD-------- 229
           +G  G PG  GL G  G  GEPG  G  G  G  G PG  G       PG+         
Sbjct: 619 QGPAGPPGFQGLPGPQGATGEPGKSGEQGVPGEAGAPGPAGSRGDRGFPGERGAPGPAGP 678

Query: 230 -------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                  G  G +G  G+ G  G  G +G  G+ G+PG
Sbjct: 679 AGARGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPG 716



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 53/105 (50%), Gaps = 15/105 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRG-- 161
           G  GP+G +G  G  G+ G  GE G+ G PG  GPPGPQG         +PG +G RG  
Sbjct: 197 GAPGPMGPRGAAGPPGKNGEDGESGKPGRPGERGPPGPQGARGFPGTPGLPGIKGHRGFS 256

Query: 162 ----PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                KGD G  GP+G  G  G+ G  G MG  G  G  GR G P
Sbjct: 257 GLDGAKGDTGPSGPKGEAGAPGENGTPGAMGPRGLPGERGRAGPP 301



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 72/190 (37%), Positives = 82/190 (43%), Gaps = 45/190 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
           G  GP G  GE+GA G  G  G +GE GA GV GP    G PG+EGKRG +G+       
Sbjct: 410 GAPGPKGNTGEVGAPGAKGEAGAKGEAGAQGVQGP---PGPPGEEGKRGARGEPGAAGGR 466

Query: 166 -----MGYPGPQGIPGDEGKRGPKGDMG------------YPGRIGLDGRDGLPGEPGLD 208
                 G PG +G PG +G  GPKG  G              G  G +G  G+PG  G+ 
Sbjct: 467 GPPGERGAPGARGFPGADGSAGPKGAPGERGGPGVVGPKGATGEPGRNGEPGMPGSKGMT 526

Query: 209 GIPGRNGMDGIPGKDGL------------------PGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG  G DG  G  G                   PG  G PG  G  GE G  G RG  
Sbjct: 527 GSPGSPGPDGKTGPSGTPGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVM 586

Query: 251 GKSGINGVPG 260
           G  G  G PG
Sbjct: 587 GAVGATGAPG 596



 Score = 39.7 bits (91), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 3/54 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGP 162
           PG++G  G  G  GAKG+ G  G +GE GAPG  G PG   P+G+PG+ G+ GP
Sbjct: 247 PGIKGHRGFSGLDGAKGDTGPSGPKGEAGAPGENGTPGAMGPRGLPGERGRAGP 300



 Score = 39.3 bits (90), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G PGEPG  G PG  G  G     G PGK+G  G +G  G  G  GP G +G  G  G P
Sbjct: 188 GPPGEPGEAGAPGPMGPRGA---AGPPGKNGEDGESGKPGRPGERGPPGPQGARGFPGTP 244

Query: 260 GTPAICAYK 268
           G P I  ++
Sbjct: 245 GLPGIKGHR 253


>gi|119585298|gb|EAW64894.1| collagen, type VII, alpha 1 (epidermolysis bullosa, dystrophic,
            dominant and recessive), isoform CRA_b [Homo sapiens]
          Length = 2609

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 94/209 (44%), Gaps = 61/209 (29%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
            GL+G  G +G +G KG+ G  GE G  G+PG  GP                    PG   
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGARE 1717

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGL 195
            +G PGD G+ GP+G  G PG  G PG+ G                RGP G+ G  G  GL
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------KDGI 231
            DGR GL G+PG  G  G NG  G    PG+DGLPG                     +DG 
Sbjct: 1778 DGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGK 1837

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG NG NGE G  G  G +G+ G +G  G
Sbjct: 1838 PGLNGKNGEPGDPGEDGRKGEKGDSGASG 1866



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 88/190 (46%), Gaps = 46/190 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
            PGL G +G+ G+ GA G  G  G+ G++G+P         G VGP   PGP G PG    
Sbjct: 2244 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2303

Query: 158  GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLD---GI 210
            G  G KG+ G PG  G+ GD  G+ G KGD G P   G  G  GR G PG+PG D   G 
Sbjct: 2304 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGA 2361

Query: 211  PGRNGMD-----------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            PG  G                         G+PG  G PG  G PG  G  GE G  GP 
Sbjct: 2362 PGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPS 2421

Query: 248  GNRGKSGING 257
            G RG +G  G
Sbjct: 2422 GERGLAGPPG 2431



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 78/141 (55%), Gaps = 12/141 (8%)

Query: 133  KGERG--EKGAPGVVGPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPK 184
            KGE+G  E GAPG+   PG  G PG++G RGP      KGD G+PGP G  G++G+RGP 
Sbjct: 1444 KGEKGDSEDGAPGL---PGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP 1500

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  G  G+ GR G  G  G  G  GR G  G PG+ G P   G P   G  GEKG  
Sbjct: 1501 GPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDV 1559

Query: 245  GPRGNRGKSGINGVPGTPAIC 265
            GP G RG +G+ G  G P + 
Sbjct: 1560 GPAGPRGATGVQGERGPPGLV 1580



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 89/199 (44%), Gaps = 60/199 (30%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------------------- 143
            GL GP G+KGE G  GE G  GE G+KGAPG                             
Sbjct: 2333 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLG 2392

Query: 144  VVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKR------------------- 181
            + G PG  G+ G  G+ GP+G+MG PGP   +G+ G  G+                    
Sbjct: 2393 LPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPG 2452

Query: 182  --GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
              G KGD G PG +GL G  G  GEPG+       G DG PG++G  G  G PG+ G  G
Sbjct: 2453 ASGLKGDKGDPG-VGLPGPRGERGEPGI------RGEDGRPGQEGPRGLTGPPGSRGERG 2505

Query: 240  EKGMTGPRGNRGKSGINGV 258
            EKG  G  G +G  G + V
Sbjct: 2506 EKGDVGSAGLKGDKGDSAV 2524



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 93/255 (36%), Gaps = 106/255 (41%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
            PG  G +G+ G  G +GE G KGERGE+G                           PG+ 
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104

Query: 146  GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
            G  GP G+      PG  G +GPKGD G PG +G  G+ G RG  G+ G PG  G+ G +
Sbjct: 2105 GEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2164

Query: 200  ---------------------------------------GLPGEPGLDGIPGRN------ 214
                                                   GL GEPG  G PGR       
Sbjct: 2165 GKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTG 2224

Query: 215  -----------------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                                         G  G PG+DG  GKDG  G+ G  G  G+ G
Sbjct: 2225 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPG 2284

Query: 246  PRGNRGKSGINGVPG 260
            P G +G+ G  G PG
Sbjct: 2285 PVGPKGEPGPTGAPG 2299



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 72/122 (59%), Gaps = 4/122 (3%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD 156
             ++G      +  P GL GP G +GE G KG++G  G +G+KG   V+ GPPGP+G  GD
Sbjct: 2478 GIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGD 2537

Query: 157  EGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
             G+RGP+G  G  GP+   G PGD+G +G  GD G  G  GL G  G  G+PG  GIPG 
Sbjct: 2538 MGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGD 2597

Query: 214  NG 215
             G
Sbjct: 2598 PG 2599



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 103/234 (44%), Gaps = 58/234 (24%)

Query: 95   PLVAMQGFCNSTKEY-CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
            P  A+ G   +  E   P GL G +   GE GAKG+ G+ G RGEKG  G  G PG  G 
Sbjct: 2298 PGQAVVGLPGAKGEKGAPGGLAGDL--VGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGE 2355

Query: 154  PGDEGKRGPKG-----------------------DMGYPGPQGIPGD---EGKRGPKGDM 187
             G +G  GPKG                       D+G PG  G PG     G+ GP+G+M
Sbjct: 2356 DGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEM 2415

Query: 188  GYPGRIGLDGRDGLPGEPGLD---------------------GIPGRNGMDGI--PGKDG 224
            G PG     G  GL G PG +                     G+ G  G  G+  PG  G
Sbjct: 2416 GQPG---PSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRG 2472

Query: 225  LPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
              G+ GI G +G  G+   +G+TGP G+RG+ G  G  G+  +   K +S  +L
Sbjct: 2473 ERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVIL 2526



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 83/182 (45%), Gaps = 45/182 (24%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRG-PK- 163
            G QGP G++G IG  GE G+KG+RG+ G       A G  GPPGP G+ G+ GK G P  
Sbjct: 1985 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGL 2044

Query: 164  -GDMGYPGPQGIPGDEGKRGPKGDMGYPGR--------------------------IGLD 196
             G  G  G  G PG+ G+RG KG+ G  GR                           GL 
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104

Query: 197  GRDGLPGEPGLDGIPGRN---------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G  G PG  G  G PG N         G+ GI G  G PG  G  G  G  GE+GM GP 
Sbjct: 2105 GEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2164

Query: 248  GN 249
            G 
Sbjct: 2165 GK 2166



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 84/186 (45%), Gaps = 39/186 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            +G  G+ G+ GE G PG    PG  G  G +G R   G  G PG  G+PG  G +G  G 
Sbjct: 2241 QGSPGLPGQVGETGKPGA---PGRDGASGKDGDR---GSPGVPGSPGLPGPVGPKGEPGP 2294

Query: 187  MGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGKDGIPGTNG 236
             G PG+  +GL G  G  G PG     L G PG  G  G+P   G+ G  G+ G PG  G
Sbjct: 2295 TGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2354

Query: 237  TNGEKGMTGPRGNRGKS--------------------GINGVPGTPAICAYKRESCSLLP 276
             +G+KG  GP+G +G                      G+ G+PG P +  +  ++    P
Sbjct: 2355 EDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTG---P 2411

Query: 277  NSETSQ 282
              E  Q
Sbjct: 2412 RGEMGQ 2417



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 94/238 (39%), Gaps = 87/238 (36%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------ 148
            G      E   PG  G  G+KG+ GA G  G  G +GE+GAPG++GP             
Sbjct: 1839 GLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPP 1898

Query: 149  -----------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG------------------ 179
                       GP+G   D G+ G KG+ G PG +G+ G+ G                  
Sbjct: 1899 GQGFPGVPGGTGPKG---DRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASA 1955

Query: 180  ---------------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------- 208
                                 +RGPKGD G  G  G +G  G PGE GL           
Sbjct: 1956 LREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQG 2015

Query: 209  ---------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                     G PG +G+ G PGK G+P   G+PG  G  GE G  G RG RG+ G  G
Sbjct: 2016 PPGLALGERGPPGPSGLAGEPGKPGIP---GLPGRAGGVGEAGRPGERGERGEKGERG 2070



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 64/134 (47%), Gaps = 25/134 (18%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE------ 178
            G +GE G  G RGE G PG  GP G  G PG  G+RG KGD+G  G +G  GD       
Sbjct: 2469 GPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGP 2528

Query: 179  -GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---------------K 222
             G RG KGDMG  G  GLDG  G  G+   +G PG  G  G PG                
Sbjct: 2529 PGPRGAKGDMGERGPRGLDGDKGPRGD---NGDPGDKGSKGEPGDKGSAGLPGLRGLLGP 2585

Query: 223  DGLPGKDGIPGTNG 236
             G PG  GIPG  G
Sbjct: 2586 QGQPGAAGIPGDPG 2599



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 101  GFCNSTKEYCPPG--LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            G      E  PPG  L GP G  G  G  G  G+ G +G  G PG VG  G  G PG +G
Sbjct: 2204 GLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDG 2263

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIPGRNGM 216
              G  GD G PG   +PG  G  GP G  G PG  G  G+   GLPG  G  G PG    
Sbjct: 2264 ASGKDGDRGSPG---VPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAG 2320

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            D +    G PG  G  G  G  GEKG  G  G  G  G +G  G P    +K
Sbjct: 2321 DLV----GEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFK 2368



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 75/162 (46%), Gaps = 38/162 (23%)

Query: 133  KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGP 183
            +G  G KG PG  GPPG        G  GP G +         G  GPQG PG  G+ G 
Sbjct: 2200 QGPSGLKGEPGETGPPG-------RGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGE 2252

Query: 184  KGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTN--- 235
             G  G PGR G  G+D   G PG PG  G+PG  G  G PG  G PG+   G+PG     
Sbjct: 2253 TGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEK 2312

Query: 236  --------------GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                          G  G++G+ GPRG +G++G  G PG P 
Sbjct: 2313 GAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2354



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 62/120 (51%), Gaps = 29/120 (24%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
            YCP G +G   + GE+G +G++G                         KGERG  GA G 
Sbjct: 1250 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGR 1306

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-IGLDGRDGLPG 203
             G PG  G PG  G  G KG  G PGP+G PG+ G RGPKG+ G PG+ IG +G  GLPG
Sbjct: 1307 PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEG-PGLPG 1365



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 93/246 (37%), Gaps = 99/246 (40%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
            P + GP G+KG++G  G  G  G +GE+G PG+V  G PGP+G PGD             
Sbjct: 1547 PAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1606

Query: 157  --------------------------EGKRGPKGD------------MGYPGPQGIPGDE 178
                                      +G+ G KGD             G  G +G PG  
Sbjct: 1607 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGL 207
            G  G KGD G PG    DGR+G P                               GEPG 
Sbjct: 1667 GPVGEKGDQGDPGE---DGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGD 1723

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGI 255
             G  G  G  G PG  G PG+ GI G              G  GEKG  GP G  G+SG+
Sbjct: 1724 RGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGL 1783

Query: 256  NGVPGT 261
            +G PG 
Sbjct: 1784 DGKPGA 1789



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 86/195 (44%), Gaps = 47/195 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE---------------------------RGEKGAPGV 144
            PG  GP G+ G+ G  GE G+ G                            +G+KG PGV
Sbjct: 2406 PGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGV 2465

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRD-- 199
             G PGP+G  G+ G RG  G  G  GP+G+   PG  G+RG KGD+G  G  G  G    
Sbjct: 2466 -GLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAV 2524

Query: 200  --GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG------------ 245
              G PG  G  G  G  G  G+ G  G  G +G PG  G+ GE G  G            
Sbjct: 2525 ILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLG 2584

Query: 246  PRGNRGKSGINGVPG 260
            P+G  G +GI G PG
Sbjct: 2585 PQGQPGAAGIPGDPG 2599



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 70/151 (46%), Gaps = 30/151 (19%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + G   S  E  P G  G IG KG+ G  G +G  GE+GE+G P   GP G +G+PG  
Sbjct: 1456 GLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP---GPAGSRGLPGVA 1512

Query: 158  G---------------KRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYPG 191
            G               ++G KG+ G P           GP+G  GD G  GP+G  G  G
Sbjct: 1513 GRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQG 1572

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
              G  G   LPG+PG  G PG  G  G+ G+
Sbjct: 1573 ERGPPGLV-LPGDPGPKGDPGDRGPIGLTGR 1602



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 87/239 (36%), Gaps = 95/239 (39%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------------------- 144
            GP G +GE G+KGE G+ GERG +G PG                                
Sbjct: 1910 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 1969

Query: 145  -----------------VGPP---GPQGIPGDEGKRGPK-------------GDMGYPGP 171
                              GPP   GP G PG+ G +G +             G+ G PGP
Sbjct: 1970 FLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2029

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------ 219
             G+ G+ GK    G  G PGR G  G  G PGE G  G  G  G  G             
Sbjct: 2030 SGLAGEPGK---PGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGP 2086

Query: 220  ------------PGKDGLPGKDGIPGTNGTNGEKGM---TGPRGNRGKSGINGVPGTPA 263
                        PG  GL G+ G PG  G  GE G     GP+G+RG  GI G  G P 
Sbjct: 2087 PGPPGPKVSVDEPGP-GLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPG 2144



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 91/209 (43%), Gaps = 47/209 (22%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             ++GF         PG++GP G+KG+   +G  G+ G  G  G PG  GP GP G     
Sbjct: 1746 GIEGFRGPPGPQGDPGVRGPAGEKGD---RGPPGLDGRSGLDGKPGAAGPSGPNGA---- 1798

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLD 208
                  G  G PG  G+PG  G++G  G  G P         G+ GL+G++G PG+PG D
Sbjct: 1799 -----AGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGED 1853

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG-----------------------EKGMTG 245
               GR G  G  G  G  G+DG  G  G  G                         G TG
Sbjct: 1854 ---GRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTG 1910

Query: 246  PRGNRGKSGINGVPGTPAICAYKRESCSL 274
            P+G+RG++G  G  G P     + E  S+
Sbjct: 1911 PKGDRGETGSKGEQGLPGERGLRGEPGSV 1939



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 75/175 (42%), Gaps = 47/175 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI----------------- 153
            P G +G  G KGE G  GE G++GE G    P V       GI                 
Sbjct: 1911 PKGDRGETGSKGEQGLPGERGLRGEPGS--VPNVDRLLETAGIKASALREIVETWDESSG 1968

Query: 154  ---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD-------------- 196
               P  E +RGPKGD G    QG PG EG       +G+PG  GL               
Sbjct: 1969 SFLPVPERRRGPKGDSGE---QGPPGKEGP------IGFPGERGLKGDRGDPGPQGPPGL 2019

Query: 197  --GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
              G  G PG  GL G PG+ G+ G+PG+ G  G+ G PG  G  GEKG  G +G 
Sbjct: 2020 ALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGR 2074



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 73/168 (43%), Gaps = 45/168 (26%)

Query: 112  PGLQGPIGQKGEIGAK------GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PGL G  G++G  G +      G+ GV+G  GEK                  G RGP G 
Sbjct: 1736 PGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEK------------------GDRGPPGL 1777

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------L 207
             G  G  G PG  G  GP G     G+ G  GRDGLPG  G                   
Sbjct: 1778 DGRSGLDGKPGAAGPSGPNGAA---GKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGE 1834

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            DG PG NG +G PG  G  G+ G  G +G +G +G  GP+G RG  GI
Sbjct: 1835 DGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGI 1882



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 72/189 (38%), Gaps = 66/189 (34%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPG 149
            +G    + E  PPG +GPIG  GE G KG+ G            GERG  G  G+ G PG
Sbjct: 1978 RGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPG 2037

Query: 150  PQGIPGDEGKRGPKGDMGYPG--------------------------------------- 170
              GIPG  G+ G  G+ G PG                                       
Sbjct: 2038 KPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVD 2097

Query: 171  -----------PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                       P G+ G +G+      +GPKGD G PG  G  G  G  G+ G  G+PG 
Sbjct: 2098 EPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGE 2157

Query: 214  NGMDGIPGK 222
             GM G  GK
Sbjct: 2158 RGMAGPEGK 2166



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 36/71 (50%), Gaps = 12/71 (16%)

Query: 184  KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            KG+ G+PG       DG PG       PGR G  G PG  GL G  G+PG  G  GE+G 
Sbjct: 1295 KGERGFPGA------DGRPGS------PGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGP 1342

Query: 244  TGPRGNRGKSG 254
             GP+G  G  G
Sbjct: 1343 RGPKGEPGAPG 1353



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 42/102 (41%), Gaps = 27/102 (26%)

Query: 183  PKGDMGYPGRIGLDGR---------------------------DGLPGEPGLDGIPGRNG 215
            PKG  G PG +GL G+                            G  G PG DG PG  G
Sbjct: 1252 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPG 1311

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G PG  G PG  G PG  G  G+ G  GPRG +G+ G  G
Sbjct: 1312 RAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPG 1353


>gi|351711760|gb|EHB14679.1| Collagen alpha-2(V) chain [Heterocephalus glaber]
          Length = 1499

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGP---P 515

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 516 GPLGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 572

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGS 622



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 85/207 (41%), Gaps = 54/207 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------- 147
            M+G    T    P G QG  G+ G  G  G  G+ G  G  G PG  GP          
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPP 443

Query: 148 -----------------------PGPQGIPGDEGKRGPKGD---MGYPGPQGIPGDEGKR 181
                                  PG  G+PG +G+ GPKG+    G  GP G PG+EGKR
Sbjct: 444 GLLGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKR 503

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP+GD                  PG  G PG  G  G PG  G PG DG+PG  G  GE+
Sbjct: 504 GPRGD------------------PGTVGPPGPLGERGAPGNRGFPGSDGLPGPKGAQGER 545

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G +G  G  G PG P +   +
Sbjct: 546 GPVGSSGPKGGQGDPGRPGEPGLPGAR 572



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 42/189 (22%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 472 VPGFKGEAGPKGEPGPHGVQGPIGPPGE---------EGKRGPRGDPGTVGPPGPLGERG 522

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEG---KRGPKGDMGYPGR-------------------- 192
             G RG  G  G PGP+G  G+ G     GPKG  G PGR                    
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 582

Query: 193 -------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                  +G  G DG PG PG  GI G+ G  G+PG     G  G PG  G  G  G+ G
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPK---GSSGDPGKPGEAGNAGVPG 639

Query: 246 PRGNRGKSG 254
            RG  GK G
Sbjct: 640 QRGAPGKDG 648



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 85/201 (42%), Gaps = 30/201 (14%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  GA G  GP GP G  G  G R
Sbjct: 279 GFSGSPGARGFPGAPGLPGLKGHRGHKGLDGPKGEIGAPGAKGEAGPTGPMGAMGPLGPR 338

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G+ G  GPQG PG  G  G  G  G  G +G+ G  G PG PG+ G  G  G  G  
Sbjct: 339 GMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGISGSPGFPGNPGMKGEAGPTGARGPE 398

Query: 221 GKDGL---------PGKDGIPGTNGTNGEKGMTGPRGNR--------------------- 250
           G  G           G  G+PG  GT+G  G  GP G+                      
Sbjct: 399 GPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLLGPPGSPGPQGST 458

Query: 251 GKSGINGVPGTPAICAYKRES 271
           G  GI G PG P +  +K E+
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEA 479



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 91/173 (52%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G  G  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 80/149 (53%), Gaps = 6/149 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEAGRNGNSGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLDGPKGEIGAPGAKGEAGPT 326

Query: 179 G---KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
           G     GP G  G PG  G  G  G PG+ G  G+PG+ G M   GI G  G PG  G+ 
Sbjct: 327 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGISGSPGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G  GP+G RG++G  G  G+
Sbjct: 387 GEAGPTGARGPEGPQGQRGETGPPGPAGS 415



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 91/189 (48%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG+PG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+G+ G +G  G  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGP 757

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 758 PGLQGMPGE 766



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 88/190 (46%), Gaps = 39/190 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 601 PPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 660

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PGD G     GP+G+ G PG  G
Sbjct: 661 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERG 720

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
             G  GLPGE G+ G  G +G  G PG  G  G  G PG  G  GE+G+    GP+G+RG
Sbjct: 721 EPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRG 780

Query: 252 KSGINGVPGT 261
             G  G  GT
Sbjct: 781 GIGEKGAEGT 790



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 82/204 (40%), Gaps = 51/204 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---------PGDEGKRGPKGDM 166
           GP G  GE G  G  G  G+RG  G PG  GP GP GI         PG +G+ GP G  
Sbjct: 336 GPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGISGSPGFPGNPGMKGEAGPTGAR 395

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------------------- 201
           G  GPQG  G+ G  GP G  G PG +G DG  G                          
Sbjct: 396 GPEGPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLLGPPGSPGPQ 455

Query: 202 -----------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------GMT 244
                      PG+PG+ G  G  G  G PG  G+ G  G PG  G  G +      G  
Sbjct: 456 GSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPP 515

Query: 245 GPRGNRGKSGINGVPGTPAICAYK 268
           GP G RG  G  G PG+  +   K
Sbjct: 516 GPLGERGAPGNRGFPGSDGLPGPK 539



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 77/170 (45%), Gaps = 42/170 (24%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------- 164
             GQ+G +G  G+   +GERG  G PG  G P         GK GP G             
Sbjct: 989  TGQRGVVGMPGQ---RGERGMPGLPGQAGTP---------GKVGPTGATGDKGPPGPVGP 1036

Query: 165  -----DMGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                  +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG 
Sbjct: 1037 PGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSSGAPGTPGPVGAPGD 1096

Query: 214  NGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1097 AGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1146



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 69/148 (46%), Gaps = 27/148 (18%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           ++G  G PG VGP GP+G  G+ G+RG  G  G PG +G+ G  G  GPKG  G  G +G
Sbjct: 694 DQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVG 753

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG--------------- 239
                   G PGL G+PG  G+ G PG  G  G  G  G  GT G               
Sbjct: 754 DT------GPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPG 807

Query: 240 ------EKGMTGPRGNRGKSGINGVPGT 261
                 EKG  GPRG  G  G  G PG+
Sbjct: 808 PAGPTGEKGEPGPRGLVGPPGSRGNPGS 835



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 69/144 (47%), Gaps = 33/144 (22%)

Query: 120 QKGEIGAKGEM---------GVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPKGDMG 167
           +KGE G +G +         G +GE G  GA G  GP GP G P   G+ G+ G KGD G
Sbjct: 814 EKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAG 873

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------------ 215
            PGPQG+    G  GP G MG P   GL G  G  G PG  G PG  G            
Sbjct: 874 SPGPQGL---AGSPGPHGPMGVP---GLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPG 927

Query: 216 ---MDGIPGKDGLPGKDGIPGTNG 236
                G PGK+G PG  G PG++G
Sbjct: 928 PAGPIGEPGKEGPPGLRGDPGSHG 951



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 49/90 (54%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G  G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSSGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1147



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 64/140 (45%), Gaps = 39/140 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G  G  G  G +G +G+RG+         PGP G+PG  G        G PGP
Sbjct: 1046 PGPEGPAGNDGTPGRDGAVGERGDRGD---------PGPAGLPGSSGA------PGTPGP 1090

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PGD G+R   GD G  G IG  GR                      GK GLPG  G 
Sbjct: 1091 VGAPGDAGQR---GDPGSRGPIGPPGRA---------------------GKRGLPGPQGP 1126

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G NG++G  G +G+RG
Sbjct: 1127 RGDKGDNGDRGDRGQKGHRG 1146



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886 PHGPMGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPIGEPGKEGPPGLRG 945

Query: 210 IPGRNG 215
            PG +G
Sbjct: 946 DPGSHG 951



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 65/143 (45%), Gaps = 2/143 (1%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ G  G  G  G+PG  G+PG +G RG KG  G  G IG  G  G  G  G  G  G  
Sbjct: 276 GEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLDGPKGEIGAPGAKGEAGPTGPMGAMGPL 335

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G+PG+ G  G  G PG  G +G  G  GP G  G SG  G PG P +      + + 
Sbjct: 336 GPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGISGSPGFPGNPGMKGEAGPTGAR 395

Query: 275 LPNSETSQL--LIPPTIVGSEHI 295
            P     Q     PP   GS+ +
Sbjct: 396 GPEGPQGQRGETGPPGPAGSQGL 418



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 85/214 (39%), Gaps = 58/214 (27%)

Query: 113 GLQ----------GPIG---------------------------QKGEIGAK-------- 127
           GL           GP+G                           Q G IGA+        
Sbjct: 203 GLGSQVGFMPGSVGPVGPRGPQGLQGQQGGVGPAGPPGEPGEPGQMGPIGARGPEGPPGK 262

Query: 128 ----GEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
               GE G  G  GE    G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+
Sbjct: 263 PGEDGEAGRNGNSGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLDGPKGEIGAPGAKGE 322

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGT 234
            GP G MG  G +G  G  G  G  G  G PG+ G  G+PGK       G+ G  G PG 
Sbjct: 323 AGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGISGSPGFPGN 382

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  GE G TG RG  G  G  G  G P     +
Sbjct: 383 PGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQ 416



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 66/155 (42%), Gaps = 48/155 (30%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PG  G PG   K GP G                   
Sbjct: 989  TGQRGVVGMPGQRGERGMPGL---PGQAGTPG---KVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            +G PGP+G         P G+ G PGR               DG  G  G  G PG  GL
Sbjct: 1043 VGEPGPEG---------PAGNDGTPGR---------------DGAVGERGDRGDPGPAGL 1078

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG  G PGT G  G  G  G RG+ G  G  G PG
Sbjct: 1079 PGSSGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPG 1113


>gi|442619458|ref|NP_001163631.2| CG42342, isoform Q [Drosophila melanogaster]
 gi|440217503|gb|ACZ94927.2| CG42342, isoform Q [Drosophila melanogaster]
          Length = 601

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 87/193 (45%), Gaps = 45/193 (23%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE--- 178
           GE G  GE+G +G +GE G PGV GPPG  G PG +G +G +GD G      I GDE   
Sbjct: 350 GERGPPGEIGAQGPQGEAGQPGVAGPPGVAGAPGTKGDKGDRGDRGLT--TTIKGDEFPT 407

Query: 179 ----------------------------------GKRGPKGDMGYPGRIGLDGRDGLPGE 204
                                             G++GP+G  G  G  GLDG  G  GE
Sbjct: 408 GIIEGPPGPAGPPGPPGEPGARGEPGPIGPAGPPGEKGPRGKRGKRGPPGLDGMKGAQGE 467

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGT 261
            G  G     G  G+PG DG+PG++G  G  G+ G+ G  G R   G+RG  G  GVPG 
Sbjct: 468 TGHKG---ERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPGL 524

Query: 262 PAICAYKRESCSL 274
            A C    +   L
Sbjct: 525 DAPCPLGADGLPL 537



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 12/104 (11%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           E G +G+RG++G PG+ G  G QG   + G +G +GD G PG  GIPG EG RG +G  G
Sbjct: 443 EKGPRGKRGKRGPPGLDGMKGAQG---ETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRG 499

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRN-----GMDGIPGKDGLPG 227
             G  G  GR G  G+ G  G+PG +     G DG+P    LPG
Sbjct: 500 DAGPPGKRGRKGDRGDKGEQGVPGLDAPCPLGADGLP----LPG 539



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 62/132 (46%), Gaps = 17/132 (12%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-KRG----PKGDMGYPG 191
           GEKG PG+ G  G +G  G  G +G KGD+G+PG       +G KR       G +GY  
Sbjct: 264 GEKGDPGLNGISGEKGAAGKPGDKGQKGDVGHPGMDVFQTVKGLKRSVTTLHGGTLGYAE 323

Query: 192 RIGLD------------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            + +             G  G PG PG  G PG  G  G  G+ G PG  G PG  G  G
Sbjct: 324 IVAVKGEPGEPGPPGPPGEAGQPGAPGERGPPGEIGAQGPQGEAGQPGVAGPPGVAGAPG 383

Query: 240 EKGMTGPRGNRG 251
            KG  G RG+RG
Sbjct: 384 TKGDKGDRGDRG 395


>gi|326925846|ref|XP_003209119.1| PREDICTED: hypothetical protein LOC100539562 [Meleagris gallopavo]
          Length = 1522

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 87/159 (54%), Gaps = 29/159 (18%)

Query: 122 GEIGAKGEMGVKGERGEKGAPG-------VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           GE G KG++G+ G +GEKG  G         GPPGP+GI G  G +G KG MGYPG  G 
Sbjct: 363 GEPGVKGQIGLPGRKGEKGEKGNQGLCSCTAGPPGPRGIQGPPGTQGKKGQMGYPGRHGE 422

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRD---GLPGEPGLDG-----IPGRNGMDGIPGKDGLP 226
            G +G+RGP G  G+PG+ G DGRD   GLPGE G +G     IPG  G  G+PG  G+ 
Sbjct: 423 KGIKGERGPTGVPGFPGQKGNDGRDGDLGLPGEKGAEGDSGVPIPGDKGFPGVPGLPGVK 482

Query: 227 GK--------------DGIPGTNGTNGEKGMTGPRGNRG 251
           G                G PG  G +G  G+ GP+G +G
Sbjct: 483 GPMGLPGLGFPGPPGVRGTPGDFGDDGNIGLPGPKGQKG 521



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 119 GQKGEIGAKGEMGVKGERGEKG------APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GQKGE G  GE G +GERGEKG      APG  G  G  G+PGD G     G MG+PG +
Sbjct: 829 GQKGEPGFPGENGFRGERGEKGNTGFRGAPGFPGNSGAPGLPGDHGD---IGLMGFPGSR 885

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG +G  G  G  G PG  G  G  G+PG PGL G  G  G  G PG+ G PG  G P
Sbjct: 886 GFPGPKGSTGITGFKGLPGDQGDVGLPGMPGNPGLTGPKGPKGFCGFPGEKGSPGIQGQP 945

Query: 233 GTNGTNGEKGMTG 245
           G  G+ GE G  G
Sbjct: 946 GRPGSKGEPGYPG 958



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/147 (43%), Positives = 77/147 (52%), Gaps = 26/147 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+QGP G KG  G  G  G  G +G++G PG        GIPG EG RG  GD       
Sbjct: 541 GVQGPKGLKGLPGLPGRSGFDGPKGQQGRPGA-------GIPGPEGFRGTAGD------- 586

Query: 173 GIPGDEGKRGPK--GDMGYPGRIGLDGRDGLPGE--------PGLDGIPGRNGMDGIPGK 222
             PG+EG+RGP   G  G PG  G+DG+ G+PG+        PG  G+PG  G  G  G 
Sbjct: 587 --PGEEGERGPTIDGKNGAPGPPGIDGQKGVPGDATYGPPGIPGNRGLPGPPGAQGARGD 644

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G+PG  G PGT G  G KG  GP G+
Sbjct: 645 PGIPGLQGHPGTPGFPGAKGFRGPEGD 671



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 90/176 (51%), Gaps = 24/176 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGV------VGPPGPQGIPGDEG----- 158
           G+QGP G  G  G +G MG   VKGE G  G PG       +G  G +G+PGD G     
Sbjct: 766 GIQGPQGFPGLPGTQGPMGISGVKGEEGNAGPPGPNGECGDMGVKGERGLPGDGGSINIR 825

Query: 159 -KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------PGLD 208
            ++G KG+ G+PG  G  G+ G++G  G  G PG  G  G  GLPG+         PG  
Sbjct: 826 LEKGQKGEPGFPGENGFRGERGEKGNTGFRGAPGFPGNSGAPGLPGDHGDIGLMGFPGSR 885

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG  G  GI G  GLPG  G  G  G  G  G+TGP+G +G  G  G  G+P I
Sbjct: 886 GFPGPKGSTGITGFKGLPGDQGDVGLPGMPGNPGLTGPKGPKGFCGFPGEKGSPGI 941



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 81/160 (50%), Gaps = 15/160 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           G  GP G+ G++G KGE G+ G         E+G+KG PG    PG  G     G+RG K
Sbjct: 796 GPPGPNGECGDMGVKGERGLPGDGGSINIRLEKGQKGEPGF---PGENGF---RGERGEK 849

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G+ G  G PG+ G  G  GD G  G +G  G  G PG  G  GI G  G+ G  G  
Sbjct: 850 GNTGFRGAPGFPGNSGAPGLPGDHGDIGLMGFPGSRGFPGPKGSTGITGFKGLPGDQGDV 909

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           GLPG  G PG  G  G KG  G  G +G  GI G PG P 
Sbjct: 910 GLPGMPGNPGLTGPKGPKGFCGFPGEKGSPGIQGQPGRPG 949



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 85/171 (49%), Gaps = 21/171 (12%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------GDMGYPGPQ 172
           GQ G  G  G  G++G +G  G PG  GP G  G+ G+EG  GP       GDMG  G +
Sbjct: 754 GQPGFPGQTGSKGIQGPQGFPGLPGTQGPMGISGVKGEEGNAGPPGPNGECGDMGVKGER 813

Query: 173 GIPGDEG------KRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKD 223
           G+PGD G      ++G KG+ G+PG  G  G  G  G  G     G PG +G  G+PG  
Sbjct: 814 GLPGDGGSINIRLEKGQKGEPGFPGENGFRGERGEKGNTGFRGAPGFPGNSGAPGLPGDH 873

Query: 224 ------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                 G PG  G PG  G+ G  G  G  G++G  G+ G+PG P +   K
Sbjct: 874 GDIGLMGFPGSRGFPGPKGSTGITGFKGLPGDQGDVGLPGMPGNPGLTGPK 924



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 97/231 (41%), Gaps = 65/231 (28%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG C+ T    PPG +G  G  G  G KG+MG  G  GEKG  G  GP G  G PG +G 
Sbjct: 386 QGLCSCTAG--PPGPRGIQGPPGTQGKKGQMGYPGRHGEKGIKGERGPTGVPGFPGQKGN 443

Query: 160 RGPKGDMGYPGPQG--------IPGDE------GKRGPKGDM--------------GYPG 191
            G  GD+G PG +G        IPGD+      G  G KG M              G PG
Sbjct: 444 DGRDGDLGLPGEKGAEGDSGVPIPGDKGFPGVPGLPGVKGPMGLPGLGFPGPPGVRGTPG 503

Query: 192 RIGLDGRDGLPGEPG--------------------------------LDGIPGRNGMDGI 219
             G DG  GLPG  G                                L G+PGR+G DG 
Sbjct: 504 DFGDDGNIGLPGPKGQKGDTVCITSPYPGNPGPPGFKGVQGPKGLKGLPGLPGRSGFDGP 563

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS--GINGVPGTPAICAYK 268
            G+ G PG  GIPG  G  G  G  G  G RG +  G NG PG P I   K
Sbjct: 564 KGQQGRPGA-GIPGPEGFRGTAGDPGEEGERGPTIDGKNGAPGPPGIDGQK 613



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 63/107 (58%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           +G PG+ G +GP G +G  GP G+PG++G+RG  G  G  G  G  G  G+PG PGLDG+
Sbjct: 58  RGQPGELGAQGPIGSLGSTGPAGLPGEKGQRGENGQPGPAGEKGDKGPTGVPGFPGLDGV 117

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PG  G +G  GK G+ G +G  G  G  GE G  GPRG  G  G  G
Sbjct: 118 PGLPGSEGPRGKHGVDGCNGSRGDPGFPGENGYIGPRGPYGNPGQKG 164



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 91/182 (50%), Gaps = 31/182 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G +G  G KG  G+ G +G  G  G VG PG  G PG  G +GPKG  G+PG +
Sbjct: 877  GLMGFPGSRGFPGPKGSTGITGFKGLPGDQGDVGLPGMPGNPGLTGPKGPKGFCGFPGEK 936

Query: 173  GIP---GDEGKRGPKGDMGYPGRIGL---------------DGRDGLPGEPGLDGI---P 211
            G P   G  G+ G KG+ GYPG  G                 G+ G+ G PGL G+    
Sbjct: 937  GSPGIQGQPGRPGSKGEPGYPGIPGFPGATGPPGLPGEPGEKGKHGILGPPGLQGLTGSQ 996

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGE--------KGMTGPRGNRGKSGING--VPGT 261
            GR G+ G+PG DGL G  G  G+ G  G+         G  GP+G RG+ G  G  +PGT
Sbjct: 997  GRKGLPGLPGLDGLHGLKGQKGSAGAPGQSETGRPGYSGEPGPKGERGEPGWPGISIPGT 1056

Query: 262  PA 263
            P 
Sbjct: 1057 PG 1058



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 91/206 (44%), Gaps = 44/206 (21%)

Query: 113  GLQGPIGQKGEIGA-----------KGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGK 159
            GL G  GQKG  GA            GE G KGERGE G PG+   G PG +G PG  G+
Sbjct: 1009 GLHGLKGQKGSAGAPGQSETGRPGYSGEPGPKGERGEPGWPGISIPGTPGERGFPGFPGR 1068

Query: 160  RGPKGDMGYPGPQ------GIPGDEGK----------------------RGPKGDMGYPG 191
            RGP G  G  GP       G+PGD+G                       RG  GD+G  G
Sbjct: 1069 RGPVGPSGPRGPSPSSAPPGLPGDQGPPGLDGIRGQPGNPGPPGETVFVRGDPGDIGIQG 1128

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
              G+ G  GL    G  G+PG  G +G  G  G+ G  G PG  G  G++G  G  G +G
Sbjct: 1129 APGIPGHRGL---QGARGLPGNQGREGPKGPMGIHGSRGPPGAVGQPGDQGFQGKPGPKG 1185

Query: 252  KSGINGVPGTPAICAYKRESCSLLPN 277
             +G +   G P       +SC  +P 
Sbjct: 1186 PTGTSSPTGDPGEPGKTDDSCPAIPG 1211



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/159 (45%), Positives = 85/159 (53%), Gaps = 17/159 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GLQG  G  G  G +G  G  G  G +G PG VG PG QG    +GK GPKG  G   P 
Sbjct: 1137 GLQGARGLPGNQGREGPKGPMGIHGSRGPPGAVGQPGDQGF---QGKPGPKGPTGTSSPT 1193

Query: 173  GIPGDEGKR--------GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPG 221
            G PG+ GK         GP G+ G+    G DG  GLPG    PG  G  G  G  G+PG
Sbjct: 1194 GDPGEPGKTDDSCPAIPGPPGEAGH---RGDDGSIGLPGPIGHPGPQGRKGEEGSCGLPG 1250

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +DGLPG  G PG  G  GE+G  GP+G  G++GI G PG
Sbjct: 1251 QDGLPGAPGPPGDQGHVGEQGYAGPQGPPGQTGIPGPPG 1289



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 66/123 (53%), Gaps = 9/123 (7%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KG  G  GE G +G  G +G  GP G+PG++G+RG   + G PGP G  GD      KG 
Sbjct: 55  KGSRGQPGELGAQGPIGSLGSTGPAGLPGEKGQRG---ENGQPGPAGEKGD------KGP 105

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG  GLDG  GLPG  G  G  G +G +G  G  G PG++G  G  G  G  G  G 
Sbjct: 106 TGVPGFPGLDGVPGLPGSEGPRGKHGVDGCNGSRGDPGFPGENGYIGPRGPYGNPGQKGE 165

Query: 247 RGN 249
           +GN
Sbjct: 166 KGN 168



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 80/181 (44%), Gaps = 42/181 (23%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG-------- 167
           GP G  G  G  G  G +G RG+ G PG+ G PG  G PG +G RGP+GD+G        
Sbjct: 622 GPPGIPGNRGLPGPPGAQGARGDPGIPGLQGHPGTPGFPGAKGFRGPEGDIGAPGCPGTP 681

Query: 168 -------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---------- 210
                   PGP G+    G  G  G  G PG  G  G  GL G PG+ G+          
Sbjct: 682 GPPCDTRLPGPAGL---RGVIGLPGSQGLPGYKGQKGDRGLAGPPGIKGLKGSPGSQGPP 738

Query: 211 -----------PGRNGMDGIPGK---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                      PG NG  G PG+    G+ G  G PG  GT G  G++G +G  G +G  
Sbjct: 739 GPPGSRGLPGLPGNNGQPGFPGQTGSKGIQGPQGFPGLPGTQGPMGISGVKGEEGNAGPP 798

Query: 257 G 257
           G
Sbjct: 799 G 799



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 80/178 (44%), Gaps = 34/178 (19%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           +  QG   S     P GL G  GQ+GE G  G  G KG++G  G PG  G  G  G+PG 
Sbjct: 64  LGAQGPIGSLGSTGPAGLPGEKGQRGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGLPGS 123

Query: 157 EGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRD--------GLPGE- 204
           EG RG  G  G  G +   G PG+ G  GP+G  G PG+ G  G          GLPG+ 
Sbjct: 124 EGPRGKHGVDGCNGSRGDPGFPGENGYIGPRGPYGNPGQKGEKGNSVYVSYFGKGLPGDR 183

Query: 205 -----------------PGLDGIPGRN--GMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
                            PG  G PG+   G  GIP   G PG  G PG++G  G  GM
Sbjct: 184 GDPGPPGMPGIPGYPGLPGEQGEPGKGEKGEKGIP---GFPGLRGSPGSDGPAGFPGM 238



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 84/181 (46%), Gaps = 33/181 (18%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---------------EKGAPGV 144
            +GFC    E   PG+QG   Q G  G+KGE G  G  G               EKG  G+
Sbjct: 927  KGFCGFPGEKGSPGIQG---QPGRPGSKGEPGYPGIPGFPGATGPPGLPGEPGEKGKHGI 983

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
            +GPPG QG+ G +G++G       PG  G+ G  G +G KG  G PG+    GR G  GE
Sbjct: 984  LGPPGLQGLTGSQGRKG------LPGLPGLDGLHGLKGQKGSAGAPGQS-ETGRPGYSGE 1036

Query: 205  PGLDGIPGRNGMDGI--PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            PG  G  G  G  GI  PG  G  G  G P      G +G  GP G RG S  +  PG P
Sbjct: 1037 PGPKGERGEPGWPGISIPGTPGERGFPGFP------GRRGPVGPSGPRGPSPSSAPPGLP 1090

Query: 263  A 263
             
Sbjct: 1091 G 1091



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 84/189 (44%), Gaps = 32/189 (16%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP------------- 142
            L  M G    T    P G  G  G+KG  G +G+ G  G +GE G P             
Sbjct: 911  LPGMPGNPGLTGPKGPKGFCGFPGEKGSPGIQGQPGRPGSKGEPGYPGIPGFPGATGPPG 970

Query: 143  -----------GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
                       G++GPPG QG+ G +G++      G PG  G+ G  G +G KG  G PG
Sbjct: 971  LPGEPGEKGKHGILGPPGLQGLTGSQGRK------GLPGLPGLDGLHGLKGQKGSAGAPG 1024

Query: 192  RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            +    GR G  GEPG  G  G  G  GI    G PG+ G PG  G  G  G +GPRG   
Sbjct: 1025 QS-ETGRPGYSGEPGPKGERGEPGWPGI-SIPGTPGERGFPGFPGRRGPVGPSGPRGPSP 1082

Query: 252  KSGINGVPG 260
             S   G+PG
Sbjct: 1083 SSAPPGLPG 1091


>gi|326433438|gb|EGD79008.1| hypothetical protein PTSG_11817 [Salpingoeca sp. ATCC 50818]
          Length = 1084

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/157 (45%), Positives = 86/157 (54%), Gaps = 18/157 (11%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ GE G +G  G  G +G +GA G+ G PGP GIPG  G +G  GD G   P+G PGD+
Sbjct: 454 GRNGEDGLRGPKGDTGAQGPQGASGLDGAPGPDGIPGSPGDKGALGDTG---PRGAPGDQ 510

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---------------GMDGIPGKD 223
           G  GP+G  G PGR GL G  G  G PG DG+ G +               G  GIPG D
Sbjct: 511 GPAGPQGPAGEPGRDGLKGEHGDAGAPGEDGVQGPDGDAGFTGSDGPRGTTGDAGIPGTD 570

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG+ G  G+ G  G +G TG  G RG  G +GVPG
Sbjct: 571 GTPGRKGQRGSQGARGPQGFTGANGPRGFDGTDGVPG 607



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 103/224 (45%), Gaps = 57/224 (25%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGD 156
           +G    T     PG QGP G +G  G  G  G+KGE G+ GAPG   V GP G  G  G 
Sbjct: 495 KGALGDTGPRGAPGDQGPAGPQGPAGEPGRDGLKGEHGDAGAPGEDGVQGPDGDAGFTGS 554

Query: 157 EGKRGPKGDMGYPGPQGIPG------DEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGL 207
           +G RG  GD G PG  G PG       +G RGP+G  G  G  G DG DG+P   G+ G 
Sbjct: 555 DGPRGTTGDAGIPGTDGTPGRKGQRGSQGARGPQGFTGANGPRGFDGTDGVPGRKGQRGT 614

Query: 208 DGIP---------GRNGMDGIPGKDGLPGKDGIP---------------GTNGTNGEK-- 241
            G P         GR+G DG PG+DGL G DG P               GT+GT G+K  
Sbjct: 615 SGAPGVKGERGPAGRDGTDGRPGEDGLDGADGAPGPRGFPGPSGPKGFRGTDGTQGDKGF 674

Query: 242 -------------------GMTGPRGNRGKSGINGVPGTPAICA 266
                              G++GPRG +G  G+ G  GTP   A
Sbjct: 675 RGDAGRDGTPGTPGTPGEDGLSGPRGPQGPRGLKGRAGTPGTIA 718



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 90/168 (53%), Gaps = 18/168 (10%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDMGYPGPQGIPGDE 178
           GA G  G KG+RGE G PG+ G  G QG PG +G       RGP+G  G PG  G  G  
Sbjct: 331 GAPGPRGDKGQRGEPGPPGITGDKGFQGEPGFDGTDGAKGLRGPRGAPGNPGVDGTNGVP 390

Query: 179 GKRGPKGDMGYPGRIGLDGRDGL-----PGEP-GLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G RG KG+ G PG  G DG  GL     P  P G  G+ G +G DG PG  G PG +G P
Sbjct: 391 GPRGVKGEAGVPGTPGRDGEQGLKGVTGPAGPKGFRGVSGADGADGAPGDVGEPGLNGTP 450

Query: 233 GTNGTNGEKGMTGPRGN------RGKSGINGVPGTPAICAYKRESCSL 274
           GT G NGE G+ GP+G+      +G SG++G PG   I     +  +L
Sbjct: 451 GTPGRNGEDGLRGPKGDTGAQGPQGASGLDGAPGPDGIPGSPGDKGAL 498



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/190 (43%), Positives = 98/190 (51%), Gaps = 30/190 (15%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  PPG+ G  G +GE G  G  G KG RG +GAPG  G  G  G+PG    RG KG+ G
Sbjct: 344 EPGPPGITGDKGFQGEPGFDGTDGAKGLRGPRGAPGNPGVDGTNGVPG---PRGVKGEAG 400

Query: 168 YPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLP---GEPGLD---GIPGRNGMDG 218
            PG  G  G++G +   GP G  G+ G  G DG DG P   GEPGL+   G PGRNG DG
Sbjct: 401 VPGTPGRDGEQGLKGVTGPAGPKGFRGVSGADGADGAPGDVGEPGLNGTPGTPGRNGEDG 460

Query: 219 IPGK---------------DGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPG 260
           + G                DG PG DGIPG+ G  G  G TGPR   G++G +G  G  G
Sbjct: 461 LRGPKGDTGAQGPQGASGLDGAPGPDGIPGSPGDKGALGDTGPRGAPGDQGPAGPQGPAG 520

Query: 261 TPAICAYKRE 270
            P     K E
Sbjct: 521 EPGRDGLKGE 530



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 99/218 (45%), Gaps = 39/218 (17%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             QG   +  E    G  GP G +G  G  G  G KG RGE G PG  G PG  G+PGD+
Sbjct: 78  GAQGAPGTPGEPGDQGPAGPRGPQGNPGTDGADGDKGFRGESGLPGTDGRPGEDGLPGDK 137

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGR- 213
           G RG  G  G  G  G PGD+G +G KG+ G PG     G  G DG PGE GL+G  G+ 
Sbjct: 138 GFRGADGFDGTVGVNGRPGDDGAKGAKGEQGTPGSRGATGPAGSDGRPGEDGLNGAKGQA 197

Query: 214 -----------NGMDGIPGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNR--- 250
                       G  G  G  G PG+DG PGT G  G++         G+ GP+G R   
Sbjct: 198 GDAGSRGPQGDKGRRGAEGPRGTPGRDGTPGTPGRKGQRGPEGPAGPSGLAGPKGFRGTD 257

Query: 251 ------------GKSGINGVPGTPAICAYKRESCSLLP 276
                       G+ G+NG PGTP     + +     P
Sbjct: 258 GVDGSRGDPGPAGEDGLNGTPGTPGSPGTRGDPGDAGP 295



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 97/202 (48%), Gaps = 31/202 (15%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG---------DMGY 168
            G+ GE GA+G  G  GE G++G     GP GPQG PG +G  G KG           G 
Sbjct: 71  AGRDGEKGAQGAPGTPGEPGDQG---PAGPRGPQGNPGTDGADGDKGFRGESGLPGTDGR 127

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           PG  G+PGD+G RG     G+ G +G++GR   DG  G  G  G PG  G  G  G DG 
Sbjct: 128 PGEDGLPGDKGFRGAD---GFDGTVGVNGRPGDDGAKGAKGEQGTPGSRGATGPAGSDGR 184

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGI---------NGVPGTPAICAYKRESCSLLP 276
           PG+DG+ G  G  G+ G  GP+G++G+ G          +G PGTP     +       P
Sbjct: 185 PGEDGLNGAKGQAGDAGSRGPQGDKGRRGAEGPRGTPGRDGTPGTPGRKGQRGPEGPAGP 244

Query: 277 NSETSQLLIPPTIVGSEHIFSS 298
               S L  P    G++ +  S
Sbjct: 245 ----SGLAGPKGFRGTDGVDGS 262



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 96/205 (46%), Gaps = 49/205 (23%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGE---------KGAPGVVGPPGPQGIPGDEG 158
           +  P G  GP G  G  G +G  GV G RG+          G PG  G PG +G PGD G
Sbjct: 235 QRGPEGPAGPSGLAGPKGFRGTDGVDGSRGDPGPAGEDGLNGTPGTPGSPGTRGDPGDAG 294

Query: 159 KR---------GPKGDMGYPGPQGIP----------GDEGKRGPKGDMGYPGRIGLDGRD 199
            R         G +GD G PGP+G+           G  G RG KG  G PG  G+ G  
Sbjct: 295 PRGSPGLDGTDGARGDAGTPGPKGLKGLRGVDAAARGAPGPRGDKGQRGEPGPPGITGDK 354

Query: 200 GLPGEPGLDGI---------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM- 243
           G  GEPG DG                PG +G +G+PG  G+ G+ G+PGT G +GE+G+ 
Sbjct: 355 GFQGEPGFDGTDGAKGLRGPRGAPGNPGVDGTNGVPGPRGVKGEAGVPGTPGRDGEQGLK 414

Query: 244 -----TGPRGNRGKSGINGVPGTPA 263
                 GP+G RG SG +G  G P 
Sbjct: 415 GVTGPAGPKGFRGVSGADGADGAPG 439



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 88/172 (51%), Gaps = 18/172 (10%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGV------------KGERGEKGAPGVVGPPGPQGIPG 155
           +  P GLQGP G  GE   KG +G+            KG+RG+ G+PG  G PG  G+ G
Sbjct: 740 DAGPKGLQGPRGLPGE---KGRVGIPGTPGTPGTPGDKGQRGDAGSPGTPGSPGEDGLDG 796

Query: 156 DEGKRG-PK--GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
             G RG P   GD G PGP+G  G  G  G +GD G  G  G D  DGLPG  G +G  G
Sbjct: 797 SPGPRGIPGVDGDDGVPGPKGRAGTPGLDGARGDPGPQGPAGADAEDGLPGPGGENGDAG 856

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  G  G  G D   G  G++G  G+ G +GN G +G+ G PGT  +
Sbjct: 857 DRGFKGFRGDPGPRGADAGDGARGSDGHHGLKGDKGNTGPTGVKGQPGTDGV 908



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------QGIPGDEGKRGPKGD 165
           PG +G  G +G  G  G  G KG RG  G  G  G PGP       G PG  G  G +GD
Sbjct: 230 PGRKGQRGPEGPAGPSGLAGPKGFRGTDGVDGSRGDPGPAGEDGLNGTPGTPGSPGTRGD 289

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP----GEPGLDGIPGRNGMDGIPG 221
            G  GP+G PG +G  G +GD G PG  GL G  G+     G PG  G  G+ G  G PG
Sbjct: 290 PGDAGPRGSPGLDGTDGARGDAGTPGPKGLKGLRGVDAAARGAPGPRGDKGQRGEPGPPG 349

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC-SLLPNSET 280
             G  G  G PG +GT+G KG+ GPRG  G  G++G  G P     K E+     P  + 
Sbjct: 350 ITGDKGFQGEPGFDGTDGAKGLRGPRGAPGNPGVDGTNGVPGPRGVKGEAGVPGTPGRDG 409

Query: 281 SQLL 284
            Q L
Sbjct: 410 EQGL 413



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 81/179 (45%), Gaps = 36/179 (20%)

Query: 132 VKGERGEKGAPGVV------------------------GPPGPQGIPGDEGKRGPKGDMG 167
           +KGERG+ G PGV                         G PG +G  G  G+ G KG  G
Sbjct: 22  LKGERGDPGEPGVPGWDGAQGDGGDGGDGGLNGINGADGRPGDRGDKGFAGRDGEKGAQG 81

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            PG  G PGD+G  GP+G  G PG  G DG  G  GE GL G  GR G DG+PG  G  G
Sbjct: 82  APGTPGEPGDQGPAGPRGPQGNPGTDGADGDKGFRGESGLPGTDGRPGEDGLPGDKGFRG 141

Query: 228 KDGIPGTNGTN------------GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
            DG  GT G N            GE+G  G RG  G +G +G PG   +   K ++   
Sbjct: 142 ADGFDGTVGVNGRPGDDGAKGAKGEQGTPGSRGATGPAGSDGRPGEDGLNGAKGQAGDA 200



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 91/204 (44%), Gaps = 13/204 (6%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   S     P G  G  G+ G  GAKG+ G  G RG +G  G  G  GP+G PG +G 
Sbjct: 167 QGTPGSRGATGPAGSDGRPGEDGLNGAKGQAGDAGSRGPQGDKGRRGAEGPRGTPGRDGT 226

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G  G  G  GP+G  G  G  GPKG   + G  G+DG  G PG  G DG+      +G 
Sbjct: 227 PGTPGRKGQRGPEGPAGPSGLAGPKG---FRGTDGVDGSRGDPGPAGEDGL------NGT 277

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI---NGVPGTPAICAYKRESCSLLP 276
           PG  G PG  G PG  G  G  G+ G  G RG +G     G+ G   + A  R +     
Sbjct: 278 PGTPGSPGTRGDPGDAGPRGSPGLDGTDGARGDAGTPGPKGLKGLRGVDAAARGAPGPRG 337

Query: 277 NSETSQLLIPPTIVGSEHIFSSSP 300
           +        PP I G +  F   P
Sbjct: 338 DKGQRGEPGPPGITG-DKGFQGEP 360



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/133 (44%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ GP G+ G  G  G  G  G +G  GA    G PGP G  GD G RG KG  G PGP+
Sbjct: 811 GVPGPKGRAGTPGLDGARGDPGPQGPAGADAEDGLPGPGGENGDAGDRGFKGFRGDPGPR 870

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G    +G RG  G  G  G  G  G  G+ G+PG DG+      DG    DG PG  G P
Sbjct: 871 GADAGDGARGSDGHHGLKGDKGNTGPTGVKGQPGTDGV------DGA---DGSPGAKGQP 921

Query: 233 GTNGTNGEKGMTG 245
           G +GT+G KGM G
Sbjct: 922 GFDGTDGLKGMRG 934



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 83/163 (50%), Gaps = 24/163 (14%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +G  G KG  G  G   E G PG  G  GP G  G  G  GPKG     GP+
Sbjct: 694 GLSGPRGPQGPRGLKGRAGTPGTIAEDGNPGNPGTQGPAGPQGPGGDAGPKG---LQGPR 750

Query: 173 GIPGDEGK---------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G+PG++G+               +G +GD G PG  G       PGE GLDG PG  G+ 
Sbjct: 751 GLPGEKGRVGIPGTPGTPGTPGDKGQRGDAGSPGTPGS------PGEDGLDGSPGPRGIP 804

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G DG+PG  G  GT G +G +G  GP+G  G    +G+PG
Sbjct: 805 GVDGDDGVPGPKGRAGTPGLDGARGDPGPQGPAGADAEDGLPG 847



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 87/177 (49%), Gaps = 21/177 (11%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QGF  +       G  G  G+KG+ G  G  GVKGERG  G  G  G PG  G+ G +G 
Sbjct: 588 QGFTGANGPRGFDGTDGVPGRKGQRGTSGAPGVKGERGPAGRDGTDGRPGEDGLDGADGA 647

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---GRDGLPGEPGLDGIPGRNGM 216
            GP+   G+PGP G  G  G  G +GD G+ G  G D   G  G PGE GL G  G  G 
Sbjct: 648 PGPR---GFPGPSGPKGFRGTDGTQGDKGFRGDAGRDGTPGTPGTPGEDGLSGPRGPQGP 704

Query: 217 DGIPGKDGLPG---KDGIPGTNGTN------------GEKGMTGPRGNRGKSGINGV 258
            G+ G+ G PG   +DG PG  GT             G KG+ GPRG  G+ G  G+
Sbjct: 705 RGLKGRAGTPGTIAEDGNPGNPGTQGPAGPQGPGGDAGPKGLQGPRGLPGEKGRVGI 761


>gi|7441219|pir||S18803 collagen alpha 1(V) chain - hamster
          Length = 1843

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 80/157 (50%), Gaps = 36/157 (22%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------DEGKRGPK 163
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G  G      D G  GP 
Sbjct: 807 GLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPT 866

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G  G  G+PG  G++GPKG +G+P                           G PG +
Sbjct: 867 GEKGKLGVPGLPGYPGRQGPKGSIGFP---------------------------GFPGAN 899

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G PG  G  G++G TGPRG RG  GI G PG
Sbjct: 900 GEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPG 936



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 61/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1409 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 1465

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1466 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGI 1525



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 881 PGRQGP---KGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 937

Query: 172 QG 173
           +G
Sbjct: 938 KG 939



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 12/94 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
           G +GP G+ G  G  G +G  GE+G+ G PG+ G PG QG          PG  G++G +
Sbjct: 846 GPEGPKGRGGPNGDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGR 905

Query: 164 GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIG 194
           G  G PGP+G     G  G+RGP+G  G PG  G
Sbjct: 906 GTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 939



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG                   
Sbjct: 1409 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1468

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                     +G  GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1469 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1521



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 98/267 (36%), Gaps = 108/267 (40%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPGVVGPP 148
           G+ G  G KG+ G  G  G+ GE+G +                        G  G+ G P
Sbjct: 624 GMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGLPGDDGERGDDGEVGPRGLPGEP 683

Query: 149 GPQG---------------IPGDEGKRGPKGDMGY------------PGPQGIPGDEGKR 181
           GP+G               + G +G+ GPKG++G             PG QG+PG +G  
Sbjct: 684 GPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAI 743

Query: 182 GPKGDMGYPGRIGLDGR------DGLPGEP------------------------------ 205
           GP G+ G  G+ GL         DG PG P                              
Sbjct: 744 GPPGEKGPLGKPGL---PGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVK 800

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------RGKSGINGVP 259
           G DGI G  G  G  G+DG PG  G  G  G  GE G  GPRG       +G+ G NG P
Sbjct: 801 GADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDP 860

Query: 260 GTPAICAYKRESCSLLPNSETSQLLIP 286
           G             L P  E  +L +P
Sbjct: 861 GP------------LGPTGEKGKLGVP 875



 Score = 40.0 bits (92), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 69/185 (37%), Gaps = 78/185 (42%)

Query: 139 KGAPGVVGPPGPQGI---------------PGDEGKRG------PKGDMGYPGPQGIPGD 177
           KG PG +GP GP+G+                G +G RG      PKGD G+ G  G+PG+
Sbjct: 587 KGEPGDMGPQGPRGVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGE 646

Query: 178 EGKR------------------------GPKGDMGYPGR------------------IGL 195
           +G R                        GP+G  G PG                    G+
Sbjct: 647 KGHRGDPGPSGPPGLPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGM 706

Query: 196 DGRDGLPG---------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           DG+ G  G                PG  G+PG  G  G PG+ G  GK G+PG  G +G 
Sbjct: 707 DGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGP 766

Query: 241 KGMTG 245
            G  G
Sbjct: 767 PGHPG 771


>gi|119578374|gb|EAW57970.1| collagen, type II, alpha 1 (primary osteoarthritis,
           spondyloepiphyseal dysplasia, congenital), isoform CRA_e
           [Homo sapiens]
          Length = 1487

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 815 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 874

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 875 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 934

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 935 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 985

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 986 PGQRGERGFPGLPG 999



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 447 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 506

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 507 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 566

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 567 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 626

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 627 GLRGLPG 633



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 860

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 920

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 921 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 980

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 981 GIVGLPG 987



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 434

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 435 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 494

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 495 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 551

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 552 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 580



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 747

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 808 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 858

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 859 DAGAPGPQGPSGAPG 873



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 750 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 804 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 860

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 714 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 763

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 764 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 821

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 822 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 876



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 638

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 698

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 699 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 734



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 81/178 (45%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 927  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 979

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 980  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 1037

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG  G  G  GE                   G TG +G+RG++G  G
Sbjct: 1038 GSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1095



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 851  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 910

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 911  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 970

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 971  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1030

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1031 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1061



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 76/189 (40%), Gaps = 57/189 (30%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 374 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 427

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 428 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 487

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 488 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 547

Query: 256 NGVPGTPAI 264
            G PG P +
Sbjct: 548 PGRPGEPGL 556



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 687 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 746

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 747 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 806

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 807 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 854



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 683 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 742

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 743 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 802

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 803 KGEVGPPGPAGSAGARGAPG 822



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 284 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 343

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 403

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 404 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 460

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 461 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 491



 Score = 39.7 bits (91), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 77/188 (40%), Gaps = 48/188 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G +GP G +G  G +G +G+ G+RGE+G PG+   PGP G PG               
Sbjct: 964  PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL---PGPSGEPGK-------------- 1006

Query: 171  PQGIPG---------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------ 215
             QG PG           G  G  G  G PGR G  G DG PG  G  G+ G  G      
Sbjct: 1007 -QGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVG 1065

Query: 216  ---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                             G  G  G  G  G  G +G  G +G+ GP+G RG  G  G PG
Sbjct: 1066 APGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPG 1125

Query: 261  TPAICAYK 268
               +  ++
Sbjct: 1126 ERGLKGHR 1133


>gi|332023475|gb|EGI63718.1| Collagen alpha-1(XXI) chain [Acromyrmex echinatior]
          Length = 876

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/133 (42%), Positives = 78/133 (58%), Gaps = 4/133 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G++G IGA G +GV+G  G +G+ G +GP GP G+ G  G++G +GDMG+P  
Sbjct: 290 PGQSGPPGEQGRIGAPGNIGVRGFPGLQGSKGSIGPAGPPGLLGSPGRKGERGDMGFP-- 347

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G+ GD+G RG  G  G PG    +  +   GE G  G  G NG+ G PG+ G  G  G 
Sbjct: 348 -GLKGDQGPRGFPGSSGNPGDFSHESSE-YKGEKGAKGERGDNGIQGQPGEKGESGDRGY 405

Query: 232 PGTNGTNGEKGMT 244
           PG +G+ G  G +
Sbjct: 406 PGLDGSRGRDGAS 418



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 81/157 (51%), Gaps = 30/157 (19%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           +IG KG++G   ERG  G PG+       G+PG EG            P G+PGD+G  G
Sbjct: 483 QIGPKGDIG---ERGRDGTPGLTDNNVISGLPGPEG------------PIGLPGDDGLPG 527

Query: 183 PKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRN---------GMDGIPGKDGLPGKDG 230
            KG+   MG  G  G  G+DG PG PG  G+PG +         G+DG+ GK G PG DG
Sbjct: 528 EKGEIGPMGPSGPSGNPGKDGYPGLPGPQGLPGPHGEPGSSGPRGLDGLAGKPGPPGSDG 587

Query: 231 IPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAI 264
             G  G  G+K   G+ GPRG  G SG  G PG P +
Sbjct: 588 KSGQKGNKGQKGEQGLAGPRGLPGNSGSMGSPGAPGV 624



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/129 (46%), Positives = 69/129 (53%), Gaps = 18/129 (13%)

Query: 112 PGLQGPIG---------QKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGK 159
           PG +GPIG         +KGEIG  G  G  G  G+ G PG+ GP   PGP G PG  G 
Sbjct: 511 PGPEGPIGLPGDDGLPGEKGEIGPMGPSGPSGNPGKDGYPGLPGPQGLPGPHGEPGSSGP 570

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           RG  G  G PGP   PG +GK G KG+ G  G  GL G  GLPG  G  G P   G  G+
Sbjct: 571 RGLDGLAGKPGP---PGSDGKSGQKGNKGQKGEQGLAGPRGLPGNSGSMGSP---GAPGV 624

Query: 220 PGKDGLPGK 228
           PG +G PG+
Sbjct: 625 PGLEGRPGQ 633



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 73/142 (51%), Gaps = 18/142 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP   +G IG  G+ G+ GE+GE G    +GP GP G PG +G  G  G  G PGP 
Sbjct: 509 GLPGP---EGPIGLPGDDGLPGEKGEIGP---MGPSGPSGNPGKDGYPGLPGPQGLPGPH 562

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG  G R            GLDG  G PG PG DG  G+ G  G  G+ GL G  G+P
Sbjct: 563 GEPGSSGPR------------GLDGLAGKPGPPGSDGKSGQKGNKGQKGEQGLAGPRGLP 610

Query: 233 GTNGTNGEKGMTGPRGNRGKSG 254
           G +G+ G  G  G  G  G+ G
Sbjct: 611 GNSGSMGSPGAPGVPGLEGRPG 632



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 59/123 (47%), Gaps = 11/123 (8%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G  G PG  G  G +G +G PG    +G PG +G +G  G  G PG +G  GR G  G+ 
Sbjct: 285 GSTGFPGQSGPPGEQGRIGAPGNIGVRGFPGLQGSKGSIGPAGPPGLLGSPGRKGERGDM 344

Query: 206 GLDGIPGRNGMDGIPGKDGLPGK--------DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G+ G  G  G PG  G PG          G  G  G  G+ G+ G  G +G+SG  G
Sbjct: 345 GFPGLKGDQGPRGFPGSSGNPGDFSHESSEYKGEKGAKGERGDNGIQGQPGEKGESGDRG 404

Query: 258 VPG 260
            PG
Sbjct: 405 YPG 407



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 5/73 (6%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G PG  GP GPQG+PG+ G++G +G  G  G +G PG  G  GP G+ G    +GL GR 
Sbjct: 775 GLPGPQGPIGPQGLPGERGEKGDRGPEGI-GLEGPPGLTGLPGPPGNDG----VGLPGRQ 829

Query: 200 GLPGEPGLDGIPG 212
           G  GEPG  G+PG
Sbjct: 830 GDRGEPGRPGVPG 842



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 20/102 (19%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------- 150
            +QG   S     PPGL G  G+KGE G  G  G+KG++G +G PG  G PG        
Sbjct: 315 GLQGSKGSIGPAGPPGLLGSPGRKGERGDMGFPGLKGDQGPRGFPGSSGNPGDFSHESSE 374

Query: 151 -------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
                         GI G  G++G  GD GYPG  G  G +G
Sbjct: 375 YKGEKGAKGERGDNGIQGQPGEKGESGDRGYPGLDGSRGRDG 416



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 31/51 (60%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
           PPG  G  GQKG  G KGE G+ G RG  G  G +G PG  G+PG EG+ G
Sbjct: 582 PPGSDGKSGQKGNKGQKGEQGLAGPRGLPGNSGSMGSPGAPGVPGLEGRPG 632



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 9/72 (12%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P GL G  G+ G  G+ G+ G KG +G+KG  G+    GP+G+PG+       G MG PG
Sbjct: 570 PRGLDGLAGKPGPPGSDGKSGQKGNKGQKGEQGLA---GPRGLPGNS------GSMGSPG 620

Query: 171 PQGIPGDEGKRG 182
             G+PG EG+ G
Sbjct: 621 APGVPGLEGRPG 632



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 18/79 (22%)

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI- 219
           GP+G +G   PQG+PG+ G++G +G  G           GL G PGL G+PG  G DG+ 
Sbjct: 778 GPQGPIG---PQGLPGERGEKGDRGPEGI----------GLEGPPGLTGLPGPPGNDGVG 824

Query: 220 -PGKD---GLPGKDGIPGT 234
            PG+    G PG+ G+PG 
Sbjct: 825 LPGRQGDRGEPGRPGVPGA 843


>gi|19745166|ref|NP_604447.1| collagen alpha-1(V) chain precursor [Rattus norvegicus]
 gi|81917473|sp|Q9JI03.1|CO5A1_RAT RecName: Full=Collagen alpha-1(V) chain; Flags: Precursor
 gi|8568096|gb|AAF76433.1|AF272662_1 alpha 1 type V collagen [Rattus norvegicus]
          Length = 1840

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 80/157 (50%), Gaps = 36/157 (22%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------DEGKRGPK 163
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G  G      D G  GP 
Sbjct: 804 GLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPT 863

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G  G  G+PG  G++GPKG +G+P                           G PG +
Sbjct: 864 GEKGKLGVPGLPGYPGRQGPKGSIGFP---------------------------GFPGAN 896

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G PG  G  G++G TGPRG RG  GI G PG
Sbjct: 897 GEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPG 933



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 61/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1406 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 1462

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1463 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGI 1522



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 12/106 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G+ G  G  G +G  GE+G+ G P         G+PG  G++GPKG +G+P   
Sbjct: 843 GPEGPKGRGGPNGDPGPLGPTGEKGKLGVP---------GLPGYPGRQGPKGSIGFP--- 890

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           G PG  G++G +G  G PG  G  G  G  GE G  GI G+ G  G
Sbjct: 891 GFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 936



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 878 PGRQGP---KGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 934

Query: 172 QG 173
           +G
Sbjct: 935 KG 936



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG                   
Sbjct: 1406 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1465

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                     +G  GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1466 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1518



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G+KG++G  G  G  G +G KG+ G        G PG  G++G +G  G PGP
Sbjct: 857 PGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFP------GFPGANGEKGGRGTPGKPGP 910

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIG 194
              +G  G  G+RGP+G  G PG  G
Sbjct: 911 RGQRGPTGPRGERGPRGITGKPGPKG 936



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 61/160 (38%), Gaps = 57/160 (35%)

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGR------DGLPGEP----------------- 205
           PG QG+PG +G  GP G+ G  G+ GL         DG PG P                 
Sbjct: 728 PGAQGLPGPQGAIGPPGEKGPLGKPGL---PGMPGADGPPGHPGKEGPPGEKGGQGPPGP 784

Query: 206 -------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN--- 249
                        G DGI G  G  G  G+DG PG  G  G  G  GE G  GPRG    
Sbjct: 785 QGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGP 844

Query: 250 ---RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
              +G+ G NG PG             L P  E  +L +P
Sbjct: 845 EGPKGRGGPNGDPGP------------LGPTGEKGKLGVP 872



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 69/185 (37%), Gaps = 78/185 (42%)

Query: 139 KGAPGVVGPPGPQGI---------------PGDEGKRG------PKGDMGYPGPQGIPGD 177
           KG PG +GP GP+G+                G +G RG      PKGD G+ G  G+PG+
Sbjct: 584 KGEPGDMGPQGPRGVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGE 643

Query: 178 EGKR------------------------GPKGDMGYPGR------------------IGL 195
           +G R                        GP+G  G PG                    G+
Sbjct: 644 KGHRGDPGPSGPPGLPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGM 703

Query: 196 DGRDGLPG---------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           DG+ G  G                PG  G+PG  G  G PG+ G  GK G+PG  G +G 
Sbjct: 704 DGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGP 763

Query: 241 KGMTG 245
            G  G
Sbjct: 764 PGHPG 768


>gi|309183|gb|AAA37443.1| collagen type XVII [Mus musculus]
          Length = 1433

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 86/200 (43%), Gaps = 59/200 (29%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG- 179
           +G  G KG+MG +G +G++G PG  G PGP G PG EG +G KG +G PG +G  G  G 
Sbjct: 573 RGSPGPKGDMGSQGPKGDRGLPGTPGIPGPLGHPGPEGPKGQKGSIGDPGMEGPIGQRGL 632

Query: 180 -------------KRGPKGDMGYPGR---------------------------------I 193
                          G KGD G  G                                   
Sbjct: 633 AGPMGPRGEPGPPGSGEKGDRGIAGEQGPQGLPGVPGPPGLRGHSGSPGPQGPPGAVGPQ 692

Query: 194 GLDGRDGLP---GEPGLDGIPGRN---------GMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GL G  GLP   G+ GL G PG           G+ G PG  GLPG  G PG  G  G  
Sbjct: 693 GLRGDVGLPGVKGDKGLMGPPGPKGDQGEKGPRGLTGEPGIRGLPGAVGEPGAKGAMGPA 752

Query: 242 GMTGPRGNRGKSGINGVPGT 261
           G  G +G+RG+ G+ G+PGT
Sbjct: 753 GADGQQGSRGEQGLTGMPGT 772



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 86/199 (43%), Gaps = 74/199 (37%)

Query: 112 PGLQGPIGQKG--------------EIGAKGEMGVKGE---------------------- 135
           PG++GPIGQ+G                G KG+ G+ GE                      
Sbjct: 621 PGMEGPIGQRGLAGPMGPRGEPGPPGSGEKGDRGIAGEQGPQGLPGVPGPPGLRGHSGSP 680

Query: 136 --------------RGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
                         RG+ G PGV      +GPPGP+   GD+G++GP+G  G PG +G+P
Sbjct: 681 GPQGPPGAVGPQGLRGDVGLPGVKGDKGLMGPPGPK---GDQGEKGPRGLTGEPGIRGLP 737

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------------GMDGIPGKD 223
           G  G+ G KG M   G  G DG+ G  GE GL G+PG              G+ G  G  
Sbjct: 738 GAVGEPGAKGAM---GPAGADGQQGSRGEQGLTGMPGTRGPPGPAGDPGKPGLTGPQGPQ 794

Query: 224 GLPGKDGIPGTNGTNGEKG 242
           GLPG  G PGT G  G  G
Sbjct: 795 GLPGSPGRPGTKGEPGAPG 813


>gi|380789793|gb|AFE66772.1| collagen alpha-2(IX) chain precursor [Macaca mulatta]
          Length = 689

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 92/167 (55%), Gaps = 21/167 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPG------DEGKRGP 162
           PG++G  GQ G  G+ G  G   V G+ G KG PG  G PGPQG+PG       EG+ GP
Sbjct: 315 PGMKGSAGQAGRPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGP 374

Query: 163 KGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G++   GPQGI    GD+G+RGP G  G  GR G  G  G PG PG  G+PG  G  G 
Sbjct: 375 RGEI---GPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGSPGIPGPQGLPGIKGNKGS 431

Query: 220 PGKDGL------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PGK G       PG  G+PG  G  GE G  GP+G +G  G  G PG
Sbjct: 432 PGKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPG 478



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 88/159 (55%), Gaps = 21/159 (13%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY-- 168
           PPG +G  G +GEIG +G MG KG++GE+         GP G PG +G++GPKG+ G   
Sbjct: 365 PPGKEGEPGPRGEIGPQGIMGQKGDQGER---------GPVGQPGPQGRQGPKGEQGSPG 415

Query: 169 -PGPQGIP------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            PGPQG+P      G  GK GP+G +G PG  GL G     GE G  G PG  G  G+ G
Sbjct: 416 IPGPQGLPGIKGNKGSPGKTGPRGGVGDPGVAGLPGEK---GEKGESGEPGPKGQQGVRG 472

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G PG  G  G  G  G  G+ GPRG  G  G+ G PG
Sbjct: 473 EPGYPGPSGDAGAPGVQGYPGLPGPRGLVGNRGVPGQPG 511



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 93/179 (51%), Gaps = 12/179 (6%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            M+G          PG QG  G  G+ G KG  G +GE G +G PG  GPPG +G PG  
Sbjct: 316 GMKGSAGQAGRPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPR 375

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ GP      KGD G  GP G PG +G++GPKG+ G P   G+ G  GLPG  G  G P
Sbjct: 376 GEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGSP---GIPGPQGLPGIKGNKGSP 432

Query: 212 GRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           G+ G  G    PG  GLPG+ G  G +G  G KG  G RG  G  G +G  G P +  Y
Sbjct: 433 GKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGY 491



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/156 (44%), Positives = 84/156 (53%), Gaps = 6/156 (3%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G  GP G  G+ G  G  G+KG  G+ G PG  G  G  G+PG  G +G  GD G PG
Sbjct: 296 PKGATGPPGINGKDGTPGTPGMKGSAGQAGRPGSPGHQGLAGVPGQPGTKGGPGDQGEPG 355

Query: 171 PQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           PQG+      PG EG+ GP+G++G  G +G  G  G  G  G  G  GR G  G  G  G
Sbjct: 356 PQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGSPG 415

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +PG  G+PG  G  G  G TGPRG  G  G+ G+PG
Sbjct: 416 IPGPQGLPGIKGNKGSPGKTGPRGGVGDPGVAGLPG 451



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/182 (43%), Positives = 92/182 (50%), Gaps = 36/182 (19%)

Query: 112 PGLQGPIGQKGEIGAKGE------------------MGVKGERGEKGAPGVVGPPGPQGI 153
           PG QG  G KG++GA GE                   G KGE G  G  G+VG  G  G 
Sbjct: 204 PGRQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGETGPHGYKGMVGAIGATGP 263

Query: 154 PGDEGKRGP------KGDMGYP---GPQGIPGDEGKRGPK------GDMGYPGRIGLDGR 198
           PG+EG RGP      KGD+G P   GPQGI G +G  GP       G  G PG  G  G+
Sbjct: 264 PGEEGPRGPPGRAGEKGDVGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQ 323

Query: 199 DGLPGEP---GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G PG P   GL G+PG+ G  G PG  G PG  G+PG +G  G++G  GPRG  G  GI
Sbjct: 324 AGRPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGI 383

Query: 256 NG 257
            G
Sbjct: 384 MG 385



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/139 (43%), Positives = 81/139 (58%), Gaps = 15/139 (10%)

Query: 113 GLQGPIGQKGE------IGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------GDEGKR 160
           G QG +GQKG+      +G  G  G +G +GE+G+PG+   PGPQG+P      G  GK 
Sbjct: 379 GPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGSPGI---PGPQGLPGIKGNKGSPGKT 435

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GP+G +G PG  G+PG++G++G  G+ G  G+ G+ G  G PG  G  G PG  G  G+P
Sbjct: 436 GPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGLP 495

Query: 221 GKDGLPGKDGIPGTNGTNG 239
           G  GL G  G+PG  G  G
Sbjct: 496 GPRGLVGNRGVPGQPGRQG 514



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 12/133 (9%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGI 153
           QG      +  P G QGP G++G  G  G  G+ G +G KG+PG  GP      PG  G+
Sbjct: 390 QGERGPVGQPGPQGRQGPKGEQGSPGIPGPQGLPGIKGNKGSPGKTGPRGGVGDPGVAGL 449

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGI 210
           PG++G++G  G+ G  G QG+ G+ G  GP GD G P   G+ G  GLPG  GL    G+
Sbjct: 450 PGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAP---GVQGYPGLPGPRGLVGNRGV 506

Query: 211 PGRNGMDGIPGKD 223
           PG+ G  G+ G+D
Sbjct: 507 PGQPGRQGVAGRD 519



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 65/124 (52%), Gaps = 9/124 (7%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG      E   PG+ GP G  G  G KG  G  G RG  G PGV G PG +G  G+ G+
Sbjct: 402 QGRQGPKGEQGSPGIPGPQGLPGIKGNKGSPGKTGPRGGVGDPGVAGLPGEKGEKGESGE 461

Query: 160 RGPK------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            GPK      G+ GYPGP    GD G  G +G  G PG  GL G  G+PG+PG  G+ GR
Sbjct: 462 PGPKGQQGVRGEPGYPGPS---GDAGAPGVQGYPGLPGPRGLVGNRGVPGQPGRQGVAGR 518

Query: 214 NGMD 217
           +  D
Sbjct: 519 DATD 522



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 75/169 (44%), Gaps = 37/169 (21%)

Query: 142 PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM-------------- 187
           PG+ GPPG QG+ G  GKRG  GD         PG +GK GPKGD+              
Sbjct: 180 PGMKGPPGLQGVKGHAGKRGVLGD---------PGRQGKPGPKGDVGASGEQGIPGPPGP 230

Query: 188 ----GYPGRIGLDGR------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
               GYPG  G  G        G+ G  G  G PG  G  G PG+ G  G  G PG  G 
Sbjct: 231 QGIRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDVGSPGIRGP 290

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC-SLLPNSETSQLLI 285
              +G+TGP+G  G  GING  GTP     K  +  +  P S   Q L 
Sbjct: 291 ---QGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGRPGSPGHQGLA 336


>gi|326925848|ref|XP_003209120.1| PREDICTED: collagen alpha-3(IV) chain-like [Meleagris gallopavo]
          Length = 1627

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 95/171 (55%), Gaps = 10/171 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP GQ G  G +G  G KG  G  GAPG  G  GP G  GD+G++G KG+ GY  P
Sbjct: 434 PGTPGPRGQDGIPGREGTPGPKGSPGSPGAPGFPGAQGPPGFKGDQGRKGSKGEPGYVYP 493

Query: 172 QGIPGDEGKRGPKGDM------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G  G++G+ GP+GD       G+ GR G  G  G  GE GL G  G  G  G+PG  G 
Sbjct: 494 EGPKGEQGEPGPRGDKGRKGSSGFLGRPGSKGHKGSKGEEGLAGSKGDRGQPGLPGNPGS 553

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           PG+ G+PG  G  G +G+ G +G++G  G +G+PG       K E+  + P
Sbjct: 554 PGEMGLPGLPGY-GPQGIRGVKGSKGLPGPHGLPGE---AGLKGETSRIAP 600



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 90/170 (52%), Gaps = 17/170 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEK--GAPGVV--GPPGPQGIPGDEGKRGPKGDMG 167
           PG +G  G +G+IG  G  G  G+ GEK  G PG++  G PG  G PG  G  GPKGD G
Sbjct: 665 PGSRGAPGCEGKIGEPGRAGNLGQPGEKVRGDPGMIIPGEPGKLGSPGGRGIPGPKGDTG 724

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP-----GLDGIPGRNGMDGIPGK 222
           +PG  G+PG  G+ G  G  G PG  G+ G  G PG+P     GL G+PG  G  G PG+
Sbjct: 725 FPGLPGLPGHAGRDGNSGLRGDPGSSGVPGDPGFPGKPAECLTGLPGLPGAQGATGPPGR 784

Query: 223 DGLPGKD--------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G          GIPG +G  GE G+ G  GN G  G+ G  G P +
Sbjct: 785 RGSLGSKGKLGPPGLGIPGIDGKPGEPGLIGLLGNTGLPGLKGQSGRPGV 834



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 106/210 (50%), Gaps = 27/210 (12%)

Query: 79   STHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGP------IGQKGEIGAKG---E 129
             +  NP +   ++    L   +GF  +  E    G  GP      IG KGE G+KG    
Sbjct: 860  GSPGNPGIR-GSFGSPGLKGRKGFIGAQGEPGDKGFPGPSETLVVIGNKGEQGSKGVQGR 918

Query: 130  MGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            MG+KGE+G+   +G PG++G  G +G+PG +G     G  G PG QG PG  G    KG+
Sbjct: 919  MGLKGEKGDAGVQGPPGLIGSEGVRGVPGVKGFM---GLPGIPGGQGFPGVPGN---KGN 972

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG--KDGIPGTNGTNGEKGMT 244
            MG PG+    G+ G PG PG  G PG  G  G PG+ G PG    G+PG  G  G+ G  
Sbjct: 973  MGIPGQ---KGQKGSPGFPGTSGDPGPTGYGGFPGEKGDPGHPSPGLPGEPGPKGDPGAP 1029

Query: 245  GPRGNRGKSGINGVP---GTPAICAYKRES 271
            G  G +G+ G  G P   G P +  ++ E+
Sbjct: 1030 GVLGRKGEKGSQGQPGHKGAPGLPGFRGET 1059



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/133 (43%), Positives = 72/133 (54%), Gaps = 12/133 (9%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGD------MGYPGPQGIPGDEGKRGPKGDMGYP 190
           G  G PG  GP G  GIPG EG  GPKG        G+PG QG PG +G +G KG  G P
Sbjct: 429 GAAGLPGTPGPRGQDGIPGREGTPGPKGSPGSPGAPGFPGAQGPPGFKGDQGRKGSKGEP 488

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G +  +G  G  GEPG  G  GR       G  G  G+ G  G  G+ GE+G+ G +G+R
Sbjct: 489 GYVYPEGPKGEQGEPGPRGDKGRK------GSSGFLGRPGSKGHKGSKGEEGLAGSKGDR 542

Query: 251 GKSGINGVPGTPA 263
           G+ G+ G PG+P 
Sbjct: 543 GQPGLPGNPGSPG 555



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 85/186 (45%), Gaps = 46/186 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G  G  G +G KGE G +G+ G KGAPG+             G RG  G  G PG 
Sbjct: 1020 PGPKGDPGAPGVLGRKGEKGSQGQPGHKGAPGL------------PGFRGETGVAGNPGK 1067

Query: 172  QGIPGDEGKR------------GPKGDMGYPGRIGL------DGRDGLPGEPGLDGIPG- 212
             G+PGD G +            GP G  GYPG  GL       G+DG+PG PG+ G PG 
Sbjct: 1068 LGLPGDVGVKGQQGHPGQQGVTGPPGAAGYPGENGLAGERGNQGQDGMPGAPGVKGEPGV 1127

Query: 213  --------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                            G  G  G  G PG  G+PG  G  G   +TGP+GNRG  G +G 
Sbjct: 1128 KGDMGLPGFPGPPGMKGHQGDQGPIGPPGLMGLPGFQGATGMA-ITGPKGNRGIPGADGR 1186

Query: 259  PGTPAI 264
            PG P  
Sbjct: 1187 PGIPGF 1192



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 103/261 (39%), Gaps = 74/261 (28%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIG-----AKGEMGVKGERGEKGAPGVVGPPGPQGI- 153
           +G   S  +   PGL G  G  GE+G       G  G++G +G KG PG  G PG  G+ 
Sbjct: 533 EGLAGSKGDRGQPGLPGNPGSPGEMGLPGLPGYGPQGIRGVKGSKGLPGPHGLPGEAGLK 592

Query: 154 ------------------------------------PGDEGKRGPKGDMGYPG------- 170
                                               PGD G  GP GD G+PG       
Sbjct: 593 GETSRIAPLPAMPGPQGPDGLPGPPGVPGRVGTSGQPGDVGHPGPTGDTGFPGLGFPGNX 652

Query: 171 --------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----------LPGEPGLDGIPG 212
                    +G+PG  G  G +G +G PGR G  G+ G          +PGEPG  G PG
Sbjct: 653 XXXXXXXXDKGLPGSRGAPGCEGKIGEPGRAGNLGQPGEKVRGDPGMIIPGEPGKLGSPG 712

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
             G+ G  G  G PG  G+PG  G +G  G+      RG  G +GVPG P       E  
Sbjct: 713 GRGIPGPKGDTGFPGLPGLPGHAGRDGNSGL------RGDPGSSGVPGDPGFPGKPAECL 766

Query: 273 SLLPNSETSQLLI-PPTIVGS 292
           + LP    +Q    PP   GS
Sbjct: 767 TGLPGLPGAQGATGPPGRRGS 787



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 83/175 (47%), Gaps = 41/175 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGI--------------P 154
            PG+ G  G  G  G KG MG+ G++G+KG+PG     G PGP G               P
Sbjct: 955  PGIPGGQGFPGVPGNKGNMGIPGQKGQKGSPGFPGTSGDPGPTGYGGFPGEKGDPGHPSP 1014

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G  G+ GPKGD G PG  G  G++G +G  G  G PG  G  G  G+ G PG  G+PG  
Sbjct: 1015 GLPGEPGPKGDPGAPGVLGRKGEKGSQGQPGHKGAPGLPGFRGETGVAGNPGKLGLPGDV 1074

Query: 215  GMD------------------GIPGKDGLP------GKDGIPGTNGTNGEKGMTG 245
            G+                   G PG++GL       G+DG+PG  G  GE G+ G
Sbjct: 1075 GVKGQQGHPGQQGVTGPPGAAGYPGENGLAGERGNQGQDGMPGAPGVKGEPGVKG 1129



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 84/182 (46%), Gaps = 26/182 (14%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---------GDEGKRGPKGDMGY 168
            IG  G  G +G  G  G +G KG  G  G PG +G P         G++G++G KG  G 
Sbjct: 859  IGSPGNPGIRGSFGSPGLKGRKGFIGAQGEPGDKGFPGPSETLVVIGNKGEQGSKGVQGR 918

Query: 169  PGPQGIPGDEGKRGPKGDM------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G +G  GD G +GP G +      G PG  G  G  G+PG  G  G+PG  G  GIPG+
Sbjct: 919  MGLKGEKGDAGVQGPPGLIGSEGVRGVPGVKGFMGLPGIPGGQGFPGVPGNKGNMGIPGQ 978

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNR-----------GKSGINGVPGTPAICAYKRES 271
             G  G  G PGT+G  G  G  G  G +           G+ G  G PG P +   K E 
Sbjct: 979  KGQKGSPGFPGTSGDPGPTGYGGFPGEKGDPGHPSPGLPGEPGPKGDPGAPGVLGRKGEK 1038

Query: 272  CS 273
             S
Sbjct: 1039 GS 1040



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 88/183 (48%), Gaps = 19/183 (10%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L  + G   +     PPG +G +G KG++G  G +G+ G  G+ G PG++G  G  G+PG
Sbjct: 766 LTGLPGLPGAQGATGPPGRRGSLGSKGKLGPPG-LGIPGIDGKPGEPGLIGLLGNTGLPG 824

Query: 156 DEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGRIGLDGRDG 200
            +G+ G  G  G PGP+G PG                 G  G +G  G PG  G  G  G
Sbjct: 825 LKGQSGRPGVFGVPGPRGEPGIMGPLGIPGPPGRIGSPGNPGIRGSFGSPGLKGRKGFIG 884

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGING 257
             GEPG  G PG +    + G  G  G  G+ G  G  GEK   G+ GP G  G  G+ G
Sbjct: 885 AQGEPGDKGFPGPSETLVVIGNKGEQGSKGVQGRMGLKGEKGDAGVQGPPGLIGSEGVRG 944

Query: 258 VPG 260
           VPG
Sbjct: 945 VPG 947



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 102/215 (47%), Gaps = 32/215 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--------VVGPPGPQGIPGDEGKRGP- 162
           PGL G  G+ G  G +G+ G  G  G+ G PG        + G PG QG  G  G+RG  
Sbjct: 729 PGLPGHAGRDGNSGLRGDPGSSGVPGDPGFPGKPAECLTGLPGLPGAQGATGPPGRRGSL 788

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI- 219
             KG +G PG  GIPG +GK G  G +G  G  GL G  G  G PG+ G+PG  G  GI 
Sbjct: 789 GSKGKLGPPG-LGIPGIDGKPGEPGLIGLLGNTGLPGLKGQSGRPGVFGVPGPRGEPGIM 847

Query: 220 --------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG---TPAICAYK 268
                   PG+ G PG  GI G+ G+ G KG  G  G +G+ G  G PG   T  +   K
Sbjct: 848 GPLGIPGPPGRIGSPGNPGIRGSFGSPGLKGRKGFIGAQGEPGDKGFPGPSETLVVIGNK 907

Query: 269 RESCS--------LLPNSETSQLLIPPTIVGSEHI 295
            E  S        L      + +  PP ++GSE +
Sbjct: 908 GEQGSKGVQGRMGLKGEKGDAGVQGPPGLIGSEGV 942



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 93/234 (39%), Gaps = 76/234 (32%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G KG+ GA G +G KGE+G +G PG       +G PG  G RG  G  G PG 
Sbjct: 1014 PGLPGEPGPKGDPGAPGVLGRKGEKGSQGQPGH------KGAPGLPGFRGETGVAGNPGK 1067

Query: 172  QGIPGDEGKR------------GPKGDMGYPGRIGL------DGRDGLPGEPGLDGIPG- 212
             G+PGD G +            GP G  GYPG  GL       G+DG+PG PG+ G PG 
Sbjct: 1068 LGLPGDVGVKGQQGHPGQQGVTGPPGAAGYPGENGLAGERGNQGQDGMPGAPGVKGEPGV 1127

Query: 213  ----------------------------------------------RNGMDGIPGKDG-- 224
                                                            G  GIPG DG  
Sbjct: 1128 KGDMGLPGFPGPPGMKGHQGDQGPIGPPGLMGLPGFQGATGMAITGPKGNRGIPGADGRP 1187

Query: 225  -LPGKDGIPG--TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
             +PG  G+PG  T    G KG+ G  G +G  G  G  G P     +R++    
Sbjct: 1188 GIPGFQGLPGLPTMSIKGSKGVRGADGIQGPMGPAGDSGPPGPKVSERDAMCFF 1241



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 62/120 (51%), Gaps = 19/120 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP----PGP---------------QG 152
            PG++G  G +G  G +G  G +G +G+ G PGV G     PG                QG
Sbjct: 1273 PGVKGEKGNQGPPGPRGAEGPRGLKGQPGPPGVSGRIFSVPGTKGPPGLPGIPGTPGDQG 1332

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            I G  G +GPKG  G PG  G PG  G+ GPKGD G+PG+ G  G  G PG  GL G PG
Sbjct: 1333 IQGIPGLQGPKGVKGLPGSFGRPGQPGQPGPKGDRGFPGQRGQPGLIGFPGLQGLPGSPG 1392



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 82/182 (45%), Gaps = 33/182 (18%)

Query: 112  PGLQGPIGQKG------------------------EIGAKGEMGVKGERGEKGAPGVVGP 147
            PGL+G  G+ G                         IG+ G  G++G  G  G  G  G 
Sbjct: 823  PGLKGQSGRPGVFGVPGPRGEPGIMGPLGIPGPPGRIGSPGNPGIRGSFGSPGLKGRKGF 882

Query: 148  PGPQGIPGDEGKRGP---------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
             G QG PGD+G  GP         KG+ G  G QG  G +G++G  G  G PG IG +G 
Sbjct: 883  IGAQGEPGDKGFPGPSETLVVIGNKGEQGSKGVQGRMGLKGEKGDAGVQGPPGLIGSEGV 942

Query: 199  DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G+PG  G  G+PG  G  G PG  G  G  GIPG  G  G  G  G  G+ G +G  G 
Sbjct: 943  RGVPGVKGFMGLPGIPGGQGFPGVPGNKGNMGIPGQKGQKGSPGFPGTSGDPGPTGYGGF 1002

Query: 259  PG 260
            PG
Sbjct: 1003 PG 1004



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 67/150 (44%), Gaps = 35/150 (23%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP------------- 171
            G  G  G +G+ G  G PGV G  G QG PG  G  GP+G  G PGP             
Sbjct: 1256 GRPGYPGARGDPGFLGFPGVKGEKGNQGPPGPRGAEGPRGLKGQPGPPGVSGRIFSVPGT 1315

Query: 172  ---------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
                           QGI G  G +GPKG  G PG  G  G+ G PG  G  G PG+ G 
Sbjct: 1316 KGPPGLPGIPGTPGDQGIQGIPGLQGPKGVKGLPGSFGRPGQPGQPGPKGDRGFPGQRGQ 1375

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
               PG  G PG  G+PG+ G+     +TGP
Sbjct: 1376 ---PGLIGFPGLQGLPGSPGST----ITGP 1398



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 80/179 (44%), Gaps = 39/179 (21%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            ++G  G +G IG  G MG+ G +G  G   + GP G +GIPG +G+       G PG QG
Sbjct: 1142 MKGHQGDQGPIGPPGLMGLPGFQGATGM-AITGPKGNRGIPGADGR------PGIPGFQG 1194

Query: 174  IPG-----DEGKRGPKGDMGYPGRIGLDGRDGLPG---------------------EPGL 207
            +PG      +G +G +G  G  G +G  G  G PG                       G+
Sbjct: 1195 LPGLPTMSIKGSKGVRGADGIQGPMGPAGDSGPPGPKVSERDAMCFFYIENIENSVSTGV 1254

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
            +G P      G PG  G PG  G PG  G  G +G  GPRG  G  G+ G PG P +  
Sbjct: 1255 EGRP------GYPGARGDPGFLGFPGVKGEKGNQGPPGPRGAEGPRGLKGQPGPPGVSG 1307



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 42/81 (51%), Gaps = 11/81 (13%)

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP-----------GEPGLDGIPGRN 214
            G+PG  G+PG  G +G +G  G PGR G  G  G P           G+PGL G+PG  
Sbjct: 121 AGHPGRSGVPGCNGTKGDRGFPGPPGRRGAPGNPGCPADGYDQGYGAKGDPGLPGMPGPQ 180

Query: 215 GMDGIPGKDGLPGKDGIPGTN 235
           G  G+ G  G  G  G+PGT+
Sbjct: 181 GAQGVQGHPGETGLRGLPGTS 201



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 4/66 (6%)

Query: 157 EGKRGPKGDMGYPGPQGIPGDEG-KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           +G++G KG  G PGP G  G  G  +  KGD G PG  G  G++G PG PGL   PG NG
Sbjct: 245 KGEKGEKGSRGLPGPMGFTGPTGDSQSEKGDQGEPGAQGKPGKEGAPGLPGL---PGENG 301

Query: 216 MDGIPG 221
             G PG
Sbjct: 302 EQGKPG 307


>gi|281346765|gb|EFB22349.1| hypothetical protein PANDA_014033 [Ailuropoda melanoleuca]
          Length = 1513

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 100/202 (49%), Gaps = 34/202 (16%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--VVGPPGPQG-- 152
            V   G   +  E   PG+ GP   +G  G +GE G KGE+G+ G PG  + G PG +G  
Sbjct: 857  VGGMGLPGTPGEKGVPGIPGP---QGIPGLQGEKGAKGEKGQAGLPGTGIPGRPGDKGDQ 913

Query: 153  ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                 PG  G++G KG  G PG   +PG  G +G  G +GYPG  GL G  G  G PG D
Sbjct: 914  GIAGFPGSPGEKGEKGSAGIPG---VPGSPGPKGSPGTVGYPGSPGLPGEKGDKGLPGSD 970

Query: 209  GIPGRNGMDGIPGKDGL---------PGKDGIPGTNGTNGEKGMT-----------GPRG 248
            GIPG  G  G+PGK G          PG DGIPG+ G  GE G+            G +G
Sbjct: 971  GIPGIKGEAGLPGKPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGEKG 1030

Query: 249  NRGKSGINGVPGTPAICAYKRE 270
            ++G  G  G  G+P I   K E
Sbjct: 1031 SKGDVGFPGQAGSPGIPGSKGE 1052



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 107/226 (47%), Gaps = 38/226 (16%)

Query: 44   KGDIFDNSVPQTPHVEFVP--------PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIP 95
            KG +    +P TP  + VP        P L  E   + ++ Q              + +P
Sbjct: 854  KGSVGGMGLPGTPGEKGVPGIPGPQGIPGLQGEKGAKGEKGQ--------------AGLP 899

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
               + G      +    G  G  G+KGE G+ G  GV G  G KG+PG VG PG  G+PG
Sbjct: 900  GTGIPGRPGDKGDQGIAGFPGSPGEKGEKGSAGIPGVPGSPGPKGSPGTVGYPGSPGLPG 959

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            +      KGD G PG  GIPG       KG+ G PG+ G  G  G  GEPG DGIPG  G
Sbjct: 960  E------KGDKGLPGSDGIPGI------KGEAGLPGKPGPTGPAGQKGEPGSDGIPGSAG 1007

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G P   GLPG+ G PG  G  GEKG  G  G  G++G  G+PG+
Sbjct: 1008 EKGEP---GLPGR-GFPGFPGAKGEKGSKGDVGFPGQAGSPGIPGS 1049



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 92/185 (49%), Gaps = 33/185 (17%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG    T +   PGL G   Q+G  G  G  G KGE G  G PG  G PGP G+PG  G+
Sbjct: 692 QGLPGLTGQSGHPGLPG---QQGTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPGLPGE 748

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------------------------IGL 195
              KGD G+PG  G  GD G +G KGD+G PG+                        IG 
Sbjct: 749 ---KGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGP 805

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G+PG  G+PG++G  G PG+   PG  G PG  GT G  G+ GP+G+ G  G+
Sbjct: 806 TGDKGSRGDPGTPGVPGKDGQAGHPGQ---PGPKGDPGIGGTPGAPGLPGPKGSVGGMGL 862

Query: 256 NGVPG 260
            G PG
Sbjct: 863 PGTPG 867



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 87/171 (50%), Gaps = 26/171 (15%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
           GP G KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 804 GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLP 863

Query: 167 ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
                    G PGPQGIPG +G++G KG+         G PGR G  G  G+ G PG  G
Sbjct: 864 GTPGEKGVPGIPGPQGIPGLQGEKGAKGEKGQAGLPGTGIPGRPGDKGDQGIAGFPGSPG 923

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GIPG  G PG  G PGT G  G  G+ G +G++G  G +G+PG
Sbjct: 924 EKGEKGSAGIPGVPGSPGPKGSPGTVGYPGSPGLPGEKGDKGLPGSDGIPG 974



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 91/177 (51%), Gaps = 28/177 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVG-P--PGPQGIP---GDEGK 159
            PG  GP G  G  G  G  G+ G +G        G PG  G P  PGPQGIP   G++G 
Sbjct: 830  PGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGIPGLQGEKGA 889

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGR 213
            +G KG  G PG  GIPG  G +G +G  G+PG  G  G        G+PG PG  G PG 
Sbjct: 890  KGEKGQAGLPG-TGIPGRPGDKGDQGIAGFPGSPGEKGEKGSAGIPGVPGSPGPKGSPGT 948

Query: 214  NGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGT 261
             G  G P      G  GLPG DGIPG  G     G+ G TGP G +G+ G +G+PG+
Sbjct: 949  VGYPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGKPGPTGPAGQKGEPGSDGIPGS 1005



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 90/181 (49%), Gaps = 26/181 (14%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGP 150
            GF  S+     PG +G    KG++G  G+ G         +KG++G++G  G +GP G 
Sbjct: 752 HGFPGSSGPRGDPGFKG---DKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPTG- 807

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGL 207
                D+G RG  G  G PG  G  G  G+ GPKGD    G PG  GL G  G  G  GL
Sbjct: 808 -----DKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGL 862

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR-----GNRGKSGINGVPGTP 262
            G PG  G+ GIPG  G+PG  G  G  G  G+ G+ G       G++G  GI G PG+P
Sbjct: 863 PGTPGEKGVPGIPGPQGIPGLQGEKGAKGEKGQAGLPGTGIPGRPGDKGDQGIAGFPGSP 922

Query: 263 A 263
            
Sbjct: 923 G 923



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 83/171 (48%), Gaps = 24/171 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGP 162
           PG  GP G  G  G KG+ G  G  G +G PG  G  G  G+PG  G          +G 
Sbjct: 734 PGSPGPAGLPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQ 793

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-- 220
           KGD G  G  G  GD+G R   GD G PG  G DG+ G PG+PG  G PG  G  G P  
Sbjct: 794 KGDQGEKGQIGPTGDKGSR---GDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGL 850

Query: 221 ----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                     G  G PG+ G+PG  G  G  G+ G +G +G+ G  G+PGT
Sbjct: 851 PGPKGSVGGMGLPGTPGEKGVPGIPGPQGIPGLQGEKGAKGEKGQAGLPGT 901



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 76/155 (49%), Gaps = 23/155 (14%)

Query: 132 VKGERGEKGAPGV--VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG- 188
           VKGE+G  G PG+   GP G +G  G  G  G  G  G PG QG PG  G  GPKG+MG 
Sbjct: 668 VKGEKGFPGFPGLDMPGPKGDKGSQGLPGLTGQSGHPGLPGQQGTPGVPGFPGPKGEMGV 727

Query: 189 -----YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDG------- 230
                 PG  G  G  GLPGE G  G PG +G  G PG  G      LPGK G       
Sbjct: 728 MGTPGQPGSPGPAGLPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDM 787

Query: 231 --IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             + G  G  GEKG  GP G++G  G  G PG P 
Sbjct: 788 GSMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGVPG 822



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 86/200 (43%), Gaps = 60/200 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP GQKGE G+ G  G  GE+GE G PG   P    G PG +G++G KGD+G+PG 
Sbjct: 985  PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFP----GFPGAKGEKGSKGDVGFPGQ 1040

Query: 172  QG---IPGDEGKRG-----------------------PKGDM------------------ 187
             G   IPG +G++G                       PKGD                   
Sbjct: 1041 AGSPGIPGSKGEQGFMGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPMGPP 1100

Query: 188  ------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                        G PG  G  G  G  GEPG  G+PG  G  GI G  G  G  G+PG  
Sbjct: 1101 GLPGLDGLKGDKGNPGWPGAPGAPGPKGEPGFQGLPGIGGSPGITGSKGDMGPPGVPGFQ 1160

Query: 236  GTNGEKGMTGPRGNRGKSGI 255
            G  G  G+ G +G++G  G 
Sbjct: 1161 GQKGLPGLQGTKGDQGDQGF 1180



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 84/175 (48%), Gaps = 39/175 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----DE 178
           EIG  G+ G KG+RG  G  G+ G PGPQG PG          MG PG +G PG    D 
Sbjct: 331 EIGFPGQPGAKGDRGLPGRDGLEGLPGPQGSPGL---------MGQPGAKGEPGEIYFDA 381

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
             +G KGD G+PG+ G+ GR G          PGR+G  G+PG  G PG  G+ G  G  
Sbjct: 382 QLKGDKGDPGFPGQPGMPGRAG---------SPGRDGHPGLPGPKGSPGSVGLKGERGPP 432

Query: 239 GEKGMTGPRGN-----------------RGKSGINGVPGTPAICAYKRESCSLLP 276
           G  G  G RG+                 +G++G  G PG+P     K E+  ++P
Sbjct: 433 GGVGFPGSRGDIGPPGPPGFGPIGPVGDKGQAGFPGTPGSPGQPGPKGEAGKVVP 487



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 85/204 (41%), Gaps = 55/204 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PGL G  G KG  G+ G  G+KGE G  G PG  GP G +G PG +G  G  G+ G PG 
Sbjct: 955  PGLPGEKGDKGLPGSDGIPGIKGEAGLPGKPGPTGPAGQKGEPGSDGIPGSAGEKGEPGL 1014

Query: 171  PQ----GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------------- 207
            P     G PG +G++G KGD+G+PG+ G  G  G  GE G                    
Sbjct: 1015 PGRGFPGFPGAKGEKGSKGDVGFPGQAGSPGIPGSKGEQGFMGPPGPQGQPGLPGAPGHA 1074

Query: 208  -------------------------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                                           DG+ G  G  G PG  G PG  G PG  G
Sbjct: 1075 VEGPKGDRGPQGQPGLPGLPGPMGPPGLPGLDGLKGDKGNPGWPGAPGAPGPKGEPGFQG 1134

Query: 237  TNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G  G++G  G  GVPG
Sbjct: 1135 LPGIGGSPGITGSKGDMGPPGVPG 1158



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 84/168 (50%), Gaps = 28/168 (16%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVV----GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG 176
           KG+ G  G  G  G+ G KG  G V    GPPG QG+PG  G  GP+GD G+PG  G PG
Sbjct: 461 KGQAGFPGTPGSPGQPGPKGEAGKVVPLPGPPGTQGLPGSPGFPGPQGDRGFPGTPGRPG 520

Query: 177 DEGKRGP--------------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G++G                      GD+G PG  G  G +GLPG PG+ G  G  G+
Sbjct: 521 LPGEKGTIGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNGLPGNPGVPGQKGEPGV 580

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G+PG  GLPG  G PGT    GEKG  G  G  G+ G  G PG   I
Sbjct: 581 -GLPGLKGLPGLTGAPGT---PGEKGNIGGPGVPGEHGAIGPPGLQGI 624



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/138 (40%), Positives = 67/138 (48%), Gaps = 25/138 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
            PG  GP G  G +G  G  G+ GE+G+KG PG  G PG +G       PG  G  G KG+
Sbjct: 937  PGSPGPKGSPGTVGYPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGKPGPTGPAGQKGE 996

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
               PG  GIPG  G+   KG+ G PGR             G  G PG  G  G  G  G 
Sbjct: 997  ---PGSDGIPGSAGE---KGEPGLPGR-------------GFPGFPGAKGEKGSKGDVGF 1037

Query: 226  PGKDGIPGTNGTNGEKGM 243
            PG+ G PG  G+ GE+G 
Sbjct: 1038 PGQAGSPGIPGSKGEQGF 1055



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 57/119 (47%), Gaps = 36/119 (30%)

Query: 114 LQGPIGQKGEIGAKGEMGV--------------KGERGEKGAPGVVGPPGPQGIPGDEGK 159
            QGP G KG+ G  G  GV              KGE+G+KG PG       QG+PG    
Sbjct: 68  FQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGF------QGMPG---- 117

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            G KG+ G PGP+G PG +G++G KG  G+PG  G              G+PGR G  G
Sbjct: 118 LGEKGEPGKPGPRGKPGKDGEKGEKGSPGFPGDAGY------------PGLPGREGFKG 164



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 85/181 (46%), Gaps = 42/181 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMG-------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           PG QG  G  G+ GAKGE G       +KG++G+ G PG  G PG  G PG +G      
Sbjct: 356 PGPQGSPGLMGQPGAKGEPGEIYFDAQLKGDKGDPGFPGQPGMPGRAGSPGRDGH----- 410

Query: 165 DMGYPGPQGIPGDEGKRG------------PKGDMGYPGRIGL--------DGRDGLPGE 204
             G PGP+G PG  G +G             +GD+G PG  G          G+ G PG 
Sbjct: 411 -PGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDIGPPGPPGFGPIGPVGDKGQAGFPGT 469

Query: 205 PGLDGIPGRNGMDG--IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           PG  G PG  G  G  +P    LPG    PGT G  G  G  GP+G+RG  G  G PG P
Sbjct: 470 PGSPGQPGPKGEAGKVVP----LPGP---PGTQGLPGSPGFPGPQGDRGFPGTPGRPGLP 522

Query: 263 A 263
            
Sbjct: 523 G 523


>gi|81910407|sp|Q60467.1|CO5A1_CRILO RecName: Full=Collagen alpha-1(V) chain; Flags: Precursor
 gi|191151|gb|AAA37002.1| pro-alpha-1 type V collagen [Cricetulus longicaudatus]
          Length = 1840

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 80/157 (50%), Gaps = 36/157 (22%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------DEGKRGPK 163
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G  G      D G  GP 
Sbjct: 804 GLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPT 863

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G  G  G+PG  G++GPKG +G+P                           G PG +
Sbjct: 864 GEKGKLGVPGLPGYPGRQGPKGSIGFP---------------------------GFPGAN 896

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G PG  G  G++G TGPRG RG  GI G PG
Sbjct: 897 GEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPG 933



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 61/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1406 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 1462

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1463 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGI 1522



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 12/106 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G+ G  G  G +G  GE+G+ G P         G+PG  G++GPKG +G+P   
Sbjct: 843 GPEGPKGRGGPNGDPGPLGPTGEKGKLGVP---------GLPGYPGRQGPKGSIGFP--- 890

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           G PG  G++G +G  G PG  G  G  G  GE G  GI G+ G  G
Sbjct: 891 GFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 936



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 878 PGRQGP---KGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 934

Query: 172 QG 173
           +G
Sbjct: 935 KG 936



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG                   
Sbjct: 1406 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1465

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                     +G  GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1466 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1518



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G+KG++G  G  G  G +G KG+ G        G PG  G++G +G  G PGP
Sbjct: 857 PGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFP------GFPGANGEKGGRGTPGKPGP 910

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIG 194
              +G  G  G+RGP+G  G PG  G
Sbjct: 911 RGQRGPTGPRGERGPRGITGKPGPKG 936



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 98/267 (36%), Gaps = 108/267 (40%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPGVVGPP 148
           G+ G  G KG+ G  G  G+ GE+G +                        G  G+ G P
Sbjct: 621 GMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGLPGDDGERGDDGEVGPRGLPGEP 680

Query: 149 GPQG---------------IPGDEGKRGPKGDMGY------------PGPQGIPGDEGKR 181
           GP+G               + G +G+ GPKG++G             PG QG+PG +G  
Sbjct: 681 GPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAI 740

Query: 182 GPKGDMGYPGRIGLDGR------DGLPGEP------------------------------ 205
           GP G+ G  G+ GL         DG PG P                              
Sbjct: 741 GPPGEKGPLGKPGL---PGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVK 797

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------RGKSGINGVP 259
           G DGI G  G  G  G+DG PG  G  G  G  GE G  GPRG       +G+ G NG P
Sbjct: 798 GADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDP 857

Query: 260 GTPAICAYKRESCSLLPNSETSQLLIP 286
           G             L P  E  +L +P
Sbjct: 858 GP------------LGPTGEKGKLGVP 872



 Score = 39.7 bits (91), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 69/185 (37%), Gaps = 78/185 (42%)

Query: 139 KGAPGVVGPPGPQGI---------------PGDEGKRG------PKGDMGYPGPQGIPGD 177
           KG PG +GP GP+G+                G +G RG      PKGD G+ G  G+PG+
Sbjct: 584 KGEPGDMGPQGPRGVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGE 643

Query: 178 EGKR------------------------GPKGDMGYPGR------------------IGL 195
           +G R                        GP+G  G PG                    G+
Sbjct: 644 KGHRGDPGPSGPPGLPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGM 703

Query: 196 DGRDGLPG---------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           DG+ G  G                PG  G+PG  G  G PG+ G  GK G+PG  G +G 
Sbjct: 704 DGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGP 763

Query: 241 KGMTG 245
            G  G
Sbjct: 764 PGHPG 768


>gi|460246|gb|AAC46611.1| a2 (IV) basement membrane collagen [Brugia malayi]
          Length = 1802

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/157 (46%), Positives = 86/157 (54%), Gaps = 5/157 (3%)

Query: 119  GQKGEIGAKGEMGVKGER--GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG---PQG 173
            GQKGE G  G  G  G    G KG+PG  G PG  G+PG  G +G  G  GYPG    +G
Sbjct: 1289 GQKGEAGLPGLPGSPGASIAGLKGSPGAPGLPGKDGLPGLPGMKGEPGIPGYPGIPGAKG 1348

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             PG  G  G KG+ G PG  GL G+DGLPG PG+ G+PG  G  G  G  G PG  G+PG
Sbjct: 1349 EPGLPGIPGAKGEPGLPGLPGLRGKDGLPGSPGVAGLPGLPGAKGDVGLSGAPGAPGLPG 1408

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
              G  GE G+ G  G +G+ GI G PG P     K +
Sbjct: 1409 LPGLKGEPGLPGFPGPKGEPGIPGKPGFPGSQGVKGD 1445



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 96/193 (49%), Gaps = 30/193 (15%)

Query: 99   MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPG 155
            + GF        PPG+ G  GQKG+ G  G  G +G  G  G  G+ G PG +G   +PG
Sbjct: 895  IGGFKGDAGLPGPPGVDGLPGQKGDAGFPGLPGAEGPAGPPGVAGLPGFPGQKGEDGLPG 954

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDG 200
              G  G KGD G PG  G+PG +GK G                KGD G PG   L G  G
Sbjct: 955  LPGVAGLKGDAGLPGAPGLPGADGKPGFPELKGQGGPPGPPGSKGDAGLPG---LPGAPG 1011

Query: 201  LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---------NGTNGEKGMTGPRGNRG 251
            + GE G+ G+PG  G++G+PG  G PGKDGIPG          NG  GEKG  GP    G
Sbjct: 1012 VKGERGIAGLPGLPGVEGVPGYPGAPGKDGIPGIPGEKGERGFNGLPGEKGEPGPAARDG 1071

Query: 252  KSGINGVPGTPAI 264
              G  G+PG P +
Sbjct: 1072 AKGEAGLPGAPGL 1084



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 86/159 (54%), Gaps = 10/159 (6%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG++G  G +G  G  G  G+ G++GE G PG+ G PG        G +G  G  G PG 
Sbjct: 1267 PGIKGDAGIQGPPGKDGFPGLPGQKGEAGLPGLPGSPGAS----IAGLKGSPGAPGLPGK 1322

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+PG  G +G  G  GYPG  G  G      EPGL GIPG  G  G+PG  GL GKDG+
Sbjct: 1323 DGLPGLPGMKGEPGIPGYPGIPGAKG------EPGLPGIPGAKGEPGLPGLPGLRGKDGL 1376

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG+ G  G  G+ G +G+ G SG  G PG P +   K E
Sbjct: 1377 PGSPGVAGLPGLPGAKGDVGLSGAPGAPGLPGLPGLKGE 1415



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/133 (49%), Positives = 73/133 (54%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G KGE G  G  G+ G +GE G PG+ G  G  G+PG  G RG  G  G PG  
Sbjct: 1324 GLPGLPGMKGEPGIPGYPGIPGAKGEPGLPGIPGAKGEPGLPGLPGLRGKDGLPGSPGVA 1383

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+PG  G +G  G  G PG  GL G  GL GEPGL G PG  G  GIPGK G PG  G+ 
Sbjct: 1384 GLPGLPGAKGDVGLSGAPGAPGLPGLPGLKGEPGLPGFPGPKGEPGIPGKPGFPGSQGVK 1443

Query: 233  GTNGTNGEKGMTG 245
            G  GT G  G  G
Sbjct: 1444 GDCGTPGAPGRDG 1456



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 90/186 (48%), Gaps = 33/186 (17%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G+ G  G KG  G  G  G KG PG+ G PG  G  G  G  GPKGD G+PG 
Sbjct: 1120 PGLPGKQGRPGAPGPKGLDGAPGFPGLKGEPGLAGLPGLPGQIGAPGLPGPKGDAGFPGQ 1179

Query: 172  QGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPG---EPG------------- 206
             G+PG  G          RG KG  G PG  G  G DGLPG   EPG             
Sbjct: 1180 AGLPGAPGLPGKMGVPGIRGDKGSPGIPGAYGERGLDGLPGQKGEPGYPGLQGPIGPPGP 1239

Query: 207  -----LDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGV 258
                   G PG  G+ G PGKDGLPG  GI    G  G  G+ G  G  G +G++G+ G+
Sbjct: 1240 KGNVGAPGYPGVKGLPGFPGKDGLPGLPGIKGDAGIQGPPGKDGFPGLPGQKGEAGLPGL 1299

Query: 259  PGTPAI 264
            PG+P  
Sbjct: 1300 PGSPGA 1305



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 89/178 (50%), Gaps = 34/178 (19%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-------------------- 149
           C PG++   GQKG  G  G  G +GERG  G PG  GPPG                    
Sbjct: 575 CLPGMK---GQKGSAGYPGLPGPQGERGLPGVPGAQGPPGDDGMPGAPGRPGPPGPPGKD 631

Query: 150 -PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G+PG +G+  P   +  PGP   PG  G++G  G  G PG++GL G+ G PG  GL 
Sbjct: 632 GIPGLPGQKGE--PTHMLLRPGP---PGYRGQKGEAGFPGLPGQVGLPGKSGPPGLTGLP 686

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR-----GNRGKSGINGVPGT 261
           GIPG  G  G PG  G PGKDG+PG  G  G  G   P      G +G++G+ G+PG 
Sbjct: 687 GIPGPKGEPGFPGLTGKPGKDGLPGFPGFKGAPGYGAPGLPGLPGQKGEAGLPGLPGA 744



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 98/194 (50%), Gaps = 39/194 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL G +G  G+ G  G  G   + G +GE G PG+ G PG  G+PG  G +G  G  G 
Sbjct: 665 PGLPGQVGLPGKSGPPGLTGLPGIPGPKGEPGFPGLTGKPGKDGLPGFPGFKGAPG-YGA 723

Query: 169 PGPQGIPGDEGK---------RGPKGDMGYPG-----RIGLDGRDGLPGEPGLDGIPGRN 214
           PG  G+PG +G+         +GP G MG P      + G  G+DGLPG PG     G  
Sbjct: 724 PGLPGLPGQKGEAGLPGLPGAQGPVGPMGPPVAESQLKPGPPGKDGLPGLPGPK---GDA 780

Query: 215 GMDGIPGKD------GLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV------- 258
           G  G+PGK+      GLP   G +G+PG  G  G+ G+ GP+GN GK G+ G+       
Sbjct: 781 GYPGLPGKEVSLGFQGLPGPKGAEGLPGPPGAAGQPGLPGPKGNAGKPGLPGLQGQKGET 840

Query: 259 --PGTPAICAYKRE 270
             PG P +   K E
Sbjct: 841 GYPGLPGLPGAKGE 854



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 77/156 (49%), Gaps = 26/156 (16%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------GPPG 149
           L    GF      Y  PGL G  GQKGE G  G  G +G  G  G P V       GPPG
Sbjct: 709 LPGFPGF-KGAPGYGAPGLPGLPGQKGEAGLPGLPGAQGPVGPMGPP-VAESQLKPGPPG 766

Query: 150 PQGIPGDEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLP- 202
             G+P   G  GPKGD GYP   G+PG E      G  GPKG  G PG  G  G+ GLP 
Sbjct: 767 KDGLP---GLPGPKGDAGYP---GLPGKEVSLGFQGLPGPKGAEGLPGPPGAAGQPGLPG 820

Query: 203 -----GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
                G+PGL G+ G+ G  G PG  GLPG  G PG
Sbjct: 821 PKGNAGKPGLPGLQGQKGETGYPGLPGLPGAKGEPG 856



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 83/166 (50%), Gaps = 28/166 (16%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVV------------------GPPGPQGIPGDEGKR 160
            G+KGE G     G KGE G  GAPG+                   G PG  G PG  G+ 
Sbjct: 1059 GEKGEPGPAARDGAKGEAGLPGAPGLRGPQGPPGLPGLPGIKGEDGKPG-YGAPGLPGE- 1116

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMD 217
              KG  G PG QG PG  G +G  G  G+P   G  GL G  GLPG+ G  G+PG  G  
Sbjct: 1117 --KGIPGLPGKQGRPGAPGPKGLDGAPGFPGLKGEPGLAGLPGLPGQIGAPGLPGPKGDA 1174

Query: 218  GIPGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG+ GLPG  G+P   G  G  G+KG  G  G  G+ G++G+PG
Sbjct: 1175 GFPGQAGLPGAPGLPGKMGVPGIRGDKGSPGIPGAYGERGLDGLPG 1220



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 77/135 (57%), Gaps = 13/135 (9%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGP-P---------GPQGIPGDEGKRGPKGD---MGY 168
           G  G  GE G KG++G +G PG+ GP P         GPQG PG +G++G  G+    GY
Sbjct: 254 GPRGTPGEKGTKGDQGPRGLPGLPGPVPSTGAKGTIIGPQGSPGMKGEKGEPGEPGARGY 313

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG  G PG  G  G KG+ G  G  G  G++G PG PG  G  G  G+DG+PG  GLPG+
Sbjct: 314 PGNAGAPGQPGFPGMKGEKGLSGPAGPRGKEGRPGLPGPPGFKGDRGLDGLPGVPGLPGQ 373

Query: 229 DGIPGTNGTNGEKGM 243
            G PG  G +G KG+
Sbjct: 374 KGEPGFPGRDGSKGV 388



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 88/227 (38%), Gaps = 71/227 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRG---- 161
            PG +GP G  G  G  G  G KGE G  G PGV G       PG  G+PG +GK G    
Sbjct: 926  PGAEGPAGPPGVAGLPGFPGQKGEDGLPGLPGVAGLKGDAGLPGAPGLPGADGKPGFPEL 985

Query: 162  -----------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
                        KGD G PG   +PG  G +G +G  G PG  G++G  G PG PG DGI
Sbjct: 986  KGQGGPPGPPGSKGDAGLPG---LPGAPGVKGERGIAGLPGLPGVEGVPGYPGAPGKDGI 1042

Query: 211  PG------RNGMDGIPGKDGLPGKD----------------------------------- 229
            PG        G +G+PG+ G PG                                     
Sbjct: 1043 PGIPGEKGERGFNGLPGEKGEPGPAARDGAKGEAGLPGAPGLRGPQGPPGLPGLPGIKGE 1102

Query: 230  ------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
                  G PG  G  G  G+ G +G  G  G  G+ G P     K E
Sbjct: 1103 DGKPGYGAPGLPGEKGIPGLPGKQGRPGAPGPKGLDGAPGFPGLKGE 1149



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 90/212 (42%), Gaps = 54/212 (25%)

Query: 113 GLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---- 165
           GL G  GQKG+ G        G+KG++G  G PG+ GP G +G+PG  G +GP GD    
Sbjct: 557 GLPGLPGQKGDRGGSCLACLPGMKGQKGSAGYPGLPGPQGERGLPGVPGAQGPPGDDGMP 616

Query: 166 -----------------MGYPGPQG-------IPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                             G PG +G        PG  G RG KG+ G+PG         L
Sbjct: 617 GAPGRPGPPGPPGKDGIPGLPGQKGEPTHMLLRPGPPGYRGQKGEAGFPG---------L 667

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG+             G+PGK G PG  G+PG  G  GE G  G  G  GK G+ G PG 
Sbjct: 668 PGQ------------VGLPGKSGPPGLTGLPGIPGPKGEPGFPGLTGKPGKDGLPGFPGF 715

Query: 262 PAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
                Y       LP  +    L  P + G++
Sbjct: 716 KGAPGYGAPGLPGLPGQKGEAGL--PGLPGAQ 745



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 67/137 (48%), Gaps = 29/137 (21%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           GP+G PG++G +G +G  G PG   +PG     G KG +     IG  G  G+ GE    
Sbjct: 254 GPRGTPGEKGTKGDQGPRGLPG---LPGPVPSTGAKGTI-----IGPQGSPGMKGE---K 302

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS--------------- 253
           G PG  G  G PG  G PG+ G PG  G   EKG++GP G RGK                
Sbjct: 303 GEPGEPGARGYPGNAGAPGQPGFPGMKG---EKGLSGPAGPRGKEGRPGLPGPPGFKGDR 359

Query: 254 GINGVPGTPAICAYKRE 270
           G++G+PG P +   K E
Sbjct: 360 GLDGLPGVPGLPGQKGE 376



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 53/117 (45%), Positives = 62/117 (52%), Gaps = 12/117 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PGL G  G KGE G  G  G++G+ G  G+PGV G PG  G  GD G  G  G  G PG 
Sbjct: 1350 PGLPGIPGAKGEPGLPGLPGLRGKDGLPGSPGVAGLPGLPGAKGDVGLSGAPGAPGLPGL 1409

Query: 171  -----PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
                   G+PG     GPKG+ G PG+ G  G  G+ G+ G  G PGR   DG PGK
Sbjct: 1410 PGLKGEPGLPGFP---GPKGEPGIPGKPGFPGSQGVKGDCGTPGAPGR---DGAPGK 1460


>gi|363736842|ref|XP_003641762.1| PREDICTED: collagen alpha-1(XI) chain [Gallus gallus]
          Length = 1693

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 79/148 (53%), Gaps = 15/148 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G KG  G +G  G KGE+GE G PG  G         D G +G +G++G PGP+G  G E
Sbjct: 650 GVKGADGVRGLKGSKGEKGEDGFPGFKG---------DMGLKGDRGEVGQPGPRGEDGPE 700

Query: 179 G---KRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G   + GP GD G  G  G  G+    GLPG PG  G  G  G  G PG +G  G  G+ 
Sbjct: 701 GPKGRAGPSGDPGAAGPAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLH 760

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G++G TGPRG+RG  G  G PG
Sbjct: 761 GKPGPRGQRGPTGPRGSRGPRGPTGKPG 788



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 6/100 (6%)

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           + G PGPQG  G +G  GP G  G  GR G DG  G+PGEPG  G  G +G+ G+PG  G
Sbjct: 441 ESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKG 500

Query: 225 LPG------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G        G+PG +G+ GE G  GPRG  G++G  G+
Sbjct: 501 NRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGL 540



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 60/125 (48%), Gaps = 24/125 (19%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----- 176
            G  G +GE G KGE G +GAPG  GP GPQG     GK GP+G  G PGP G  G     
Sbjct: 1256 GAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGP---AGKPGPEGLRGIPGPVGEQGLPGAP 1312

Query: 177  ----------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                             +G  G KG+ G+PG IGL G  G  GE G  G+PG  G  G  
Sbjct: 1313 GQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGAK 1372

Query: 221  GKDGL 225
            G  G+
Sbjct: 1373 GDAGI 1377



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 101/287 (35%), Gaps = 108/287 (37%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEG 158
           E   PG QGP G +G  G  G+ G +G  G  GA G+ G PG +G         +PGD+G
Sbjct: 441 ESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKG 500

Query: 159 KRG---------------PKGDMGYPGPQGIPGDEGKR---------------------- 181
            RG                +G+ G  GP+G+PG+ G R                      
Sbjct: 501 NRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGLLGPRGTPGPPGQPGIAGIDG 560

Query: 182 --GPKGDM------------------------------------GYPGRIGLDGRDGLPG 203
             GPKG+M                                    G PG  GL G DG PG
Sbjct: 561 PSGPKGNMGPQGEPGPPGQQGIPGPQGLPGPQGPIGPPGEKGPQGKPGLPGLPGSDGPPG 620

Query: 204 EPGLD------------------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            PG +                        G+ G +G+ G+ G  G  G+DG PG  G  G
Sbjct: 621 HPGKEGQSGEKGALGPPGPQGPVGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMG 680

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
            KG  G  G  G  G +G  G         +  +  P  E  +L +P
Sbjct: 681 LKGDRGEVGQPGPRGEDGPEGPKGRAGPSGDPGAAGPAGEKGKLGVP 727



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 64/133 (48%), Gaps = 36/133 (27%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------- 152
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G                 
Sbjct: 659 GLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQPGPRGEDGPEGPKGRAGPSGDPGAAGPA 718

Query: 153 ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIGLD 196
                     +PG  G++GPKG  G+PG  G  G++G RG      P+G  G  G  G  
Sbjct: 719 GEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLHGKPGPRGQRGPTGPRGSR 778

Query: 197 GRDGLPGEPGLDG 209
           G  G  G+PG  G
Sbjct: 779 GPRGPTGKPGPKG 791



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 58/125 (46%), Gaps = 24/125 (19%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---- 210
            G EG++G KG  G PG +G PG  G  GP+G  G PG  GL G  G  GE GL G     
Sbjct: 1256 GAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAPGQD 1315

Query: 211  -----------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                             PG  G  G PG  GL    G PG  G  G++G+ GP+G+ G  
Sbjct: 1316 GPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGL---IGPPGEQGEKGDRGLPGPQGSPGAK 1372

Query: 254  GINGV 258
            G  G+
Sbjct: 1373 GDAGI 1377



 Score = 46.2 bits (108), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 61/145 (42%), Gaps = 45/145 (31%)

Query: 140  GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-------------------- 179
            G  G  G PGPQGIPG   K GP G  G+PG +G+PG +G                    
Sbjct: 890  GKEGAKGDPGPQGIPG---KDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPVGSP 946

Query: 180  -KRGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
             +RG  G                     + G PG  G  G  G  G  G  G+PG  G  
Sbjct: 947  GERGAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPS 1006

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G PG+DG  G+ G PG  G+ G+KG
Sbjct: 1007 GSPGEDGDKGEIGEPGQKGSKGDKG 1031



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 66/152 (43%), Gaps = 36/152 (23%)

Query: 148 PGPQGI------PGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPK----------- 184
           PGPQG+       G  G++GP+G  G P      GP G PG EG+ G K           
Sbjct: 583 PGPQGLPGPQGPIGPPGEKGPQGKPGLPGLPGSDGPPGHPGKEGQSGEKGALGPPGPQGP 642

Query: 185 -------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                        G  G  G  G  G DG PG  G  G+ G  G  G PG  G  G +G 
Sbjct: 643 VGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQPGPRGEDGPEGP 702

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G +G+ G  GP G +GK G+ G+PG P 
Sbjct: 703 KGRAGPSGDPGAAGPAGEKGKLGVPGLPGYPG 734



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
           PGL G  G++G  G+ G  G  G  GEKGA G+ G PGP+G     G  G RGP+G  G 
Sbjct: 727 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLHGKPGPRGQRGPTGPRGSRGPRGPTGK 786

Query: 169 PGPQG 173
           PGP+G
Sbjct: 787 PGPKG 791



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 56/150 (37%), Gaps = 57/150 (38%)

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG-------------------- 197
            GK G KGD   PGPQGIP   GK GP G  G+PG  GL G                    
Sbjct: 890  GKEGAKGD---PGPQGIP---GKDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPV 943

Query: 198  -------------------------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                                             G PGE G  G  GR+G+ G  G  G  
Sbjct: 944  GSPGERGAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPA 1003

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G PG +G  GE G  G +G++G  G N
Sbjct: 1004 GPSGSPGEDGDKGEIGEPGQKGSKGDKGEN 1033



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 85/194 (43%), Gaps = 36/194 (18%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------- 147
              ++GF     E   PG QGP G KG  G +G  G  G  GE+GA G  GP         
Sbjct: 910  AGLRGFPG---ERGLPGAQGPAGLKGGEGPQGPPGPVGSPGERGAAGTAGPIGLPGRPGP 966

Query: 148  ------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                   G +G PG++G +GP G  G  GP G+P      GP G  G PG  G  G  G 
Sbjct: 967  QGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP------GPAGPSGSPGEDGDKGEIGE 1020

Query: 202  PGEPGLDGIPGRN------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PG+ G  G  G N            G  GI G DG PG  G  G  G  G++G  G  G 
Sbjct: 1021 PGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGPRGFPGP 1080

Query: 250  RGKSGINGVPGTPA 263
             G  G+ G+PG P 
Sbjct: 1081 PGPIGLQGLPGPPG 1094


>gi|341877801|gb|EGT33736.1| CBN-EMB-9 protein [Caenorhabditis brenneri]
          Length = 1759

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 93/187 (49%), Gaps = 38/187 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G  G  G +G+ G  G  G  GAPG  G PG +G+PG  G++G  GD G+PG 
Sbjct: 1342 PGAPGNPGLDGVPGLEGDCGDDGYPGAPGAPGSNGYPGERGLPGVPGQQGRSGDNGFPG- 1400

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDG---------------------------------- 197
               PG  G +GP+GD G+PGR GLDG                                  
Sbjct: 1401 --QPGQPGIKGPRGDDGFPGRDGLDGLPGRPGFQGLPGPLAMEIRNPPGLPGDNGYPGEK 1458

Query: 198  -RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
               GLPG+ GL G PG+ G  G PG+DG PG+ G+PGT G  G++G  G RG  G  G+ 
Sbjct: 1459 GYPGLPGDNGLPGPPGKAGYPGSPGQDGYPGQPGLPGTPGNGGDQGFQGERGRTGHPGLP 1518

Query: 257  GVPGTPA 263
            G PG P 
Sbjct: 1519 GTPGYPG 1525



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 99/207 (47%), Gaps = 22/207 (10%)

Query: 78   NSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---VKG 134
                 N +  L+  S  P   + G   +  +Y  PGL G  G+ G  G  GE G   + G
Sbjct: 1277 GQAGQNGYPGLDGLSGGP--GLNGEPGTPGQYGMPGLPGVPGEPGVTGYPGERGLPGIDG 1334

Query: 135  ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
            +RG  G PG  G PG  G+PG EG     GD GYPG  G PG  G  G +G  G PG+ G
Sbjct: 1335 KRGHDGIPGAPGNPGLDGVPGLEGD---CGDDGYPGAPGAPGSNGYPGERGLPGVPGQQG 1391

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------PGKDGIPG--------TNGTNGE 240
              G +G PG+PG  GI G  G DG PG+DGL      PG  G+PG          G  G+
Sbjct: 1392 RSGDNGFPGQPGQPGIKGPRGDDGFPGRDGLDGLPGRPGFQGLPGPLAMEIRNPPGLPGD 1451

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAY 267
             G  G +G  G  G NG+PG P    Y
Sbjct: 1452 NGYPGEKGYPGLPGDNGLPGPPGKAGY 1478



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/188 (42%), Positives = 90/188 (47%), Gaps = 50/188 (26%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-----IPGDEGKRGPKGDMG---YPG 170
           GQ+GE+G  G  G  GE G+ G PG  G PG QG      PG  G  GPKGD G    PG
Sbjct: 788 GQQGEVGFNGIDGDCGEPGQDGYPGQPGLPGAQGETGYGFPGQVGYPGPKGDAGAAGLPG 847

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL----------------------- 207
           P G PG +G     G  GYPG  GL G+DGLPG PG                        
Sbjct: 848 PDGYPGRDGL---PGTPGYPGEAGLPGQDGLPGLPGTRGESGLVGIDGKRGRDGPVGPRG 904

Query: 208 ----------DGIPGRNGMDGIPGKDG------LPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                      G PG+NGMDG PG  G       PG+DG PG NGT GE G+ G  G RG
Sbjct: 905 NDGAPGYRGEAGAPGQNGMDGYPGAPGDQGYPGAPGQDGYPGPNGTPGEDGLVGFPGLRG 964

Query: 252 KSGINGVP 259
           + G NG+P
Sbjct: 965 EHGDNGLP 972



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 99/207 (47%), Gaps = 45/207 (21%)

Query: 112 PGLQGPIG----------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
           PG QGP G            G+ G  G  G+ G+RG  G PG+ GP GP G PG  G+RG
Sbjct: 711 PGAQGPRGIPAPLRIINQVAGQPGVDGLPGLPGDRGADGLPGLPGPVGPDGYPGTPGERG 770

Query: 162 PKGDMGYPGPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGE----------- 204
             G  G+PG  G PG  G++G        GD G PG+ G  G+ GLPG            
Sbjct: 771 MDGVPGFPGLHGEPGMRGQQGEVGFNGIDGDCGEPGQDGYPGQPGLPGAQGETGYGFPGQ 830

Query: 205 ---------------PGLDGIPGRNGMDGIPG---KDGLPGKDGIPGTNGTNGEKGMTGP 246
                          PG DG PGR+G+ G PG   + GLPG+DG+PG  GT GE G+ G 
Sbjct: 831 VGYPGPKGDAGAAGLPGPDGYPGRDGLPGTPGYPGEAGLPGQDGLPGLPGTRGESGLVGI 890

Query: 247 RGNRGKSGINGVPGTPAICAYKRESCS 273
            G RG+ G  G  G      Y+ E+ +
Sbjct: 891 DGKRGRDGPVGPRGNDGAPGYRGEAGA 917



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 87/158 (55%), Gaps = 6/158 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ G  G+ G +G +G  G  G RGE GAPG  G  G  G PGD+G  G  G  GYPGP 
Sbjct: 889  GIDGKRGRDGPVGPRGNDGAPGYRGEAGAPGQNGMDGYPGAPGDQGYPGAPGQDGYPGPN 948

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G PG++G       +G+PG  G  G +GLPG  G  G  G  G DG+PG +G PG DG+P
Sbjct: 949  GTPGEDGL------VGFPGLRGEHGDNGLPGLEGECGEEGSRGQDGLPGYNGEPGADGLP 1002

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G  G +G  G+ G  G  G+ G  G PG P   AY  +
Sbjct: 1003 GLPGADGLPGLAGEPGEPGQPGFRGQPGEPGNLAYPGQ 1040



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 91/179 (50%), Gaps = 17/179 (9%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G  GE G  G+ G+ G  G  G PGV G PG +G+PG +GKRG  G  G PG  
Sbjct: 1289 GLSGGPGLNGEPGTPGQYGMPGLPGVPGEPGVTGYPGERGLPGIDGKRGHDGIPGAPGNP 1348

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+ G  G  G  GD GYPG  G  G +G PGE GL G+PG+ G     G +G PG+ G P
Sbjct: 1349 GLDGVPGLEGDCGDDGYPGAPGAPGSNGYPGERGLPGVPGQQGRS---GDNGFPGQPGQP 1405

Query: 233  GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVG 291
            G  G  G+ G        G+ G++G+PG P            LP     ++  PP + G
Sbjct: 1406 GIKGPRGDDGFP------GRDGLDGLPGRPGFQG--------LPGPLAMEIRNPPGLPG 1450



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/163 (42%), Positives = 84/163 (51%), Gaps = 30/163 (18%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            Y PPG     GQ G  G  G  G  G  GE G PG  G PG  G+PG+ G        GY
Sbjct: 1273 YGPPGQ---AGQNGYPGLDGLSGGPGLNGEPGTPGQYGMPGLPGVPGEPGV------TGY 1323

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGL 225
            PG +G+PG +GKRG                DG+PG    PGLDG+P   G++G  G DG 
Sbjct: 1324 PGERGLPGIDGKRG---------------HDGIPGAPGNPGLDGVP---GLEGDCGDDGY 1365

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            PG  G PG+NG  GE+G+ G  G +G+SG NG PG P     K
Sbjct: 1366 PGAPGAPGSNGYPGERGLPGVPGQQGRSGDNGFPGQPGQPGIK 1408



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 89/164 (54%), Gaps = 11/164 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK--GDMGYP 169
           PG  G  G+ G  G +GE+G  G  G+ G PG  G PG  G+PG +G+ G    G +GYP
Sbjct: 775 PGFPGLHGEPGMRGQQGEVGFNGIDGDCGEPGQDGYPGQPGLPGAQGETGYGFPGQVGYP 834

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDG------RDGLPGEPGLDGIPGRNGMDGIPGKD 223
           GP+G   D G  G  G  GYPGR GL G        GLPG+ GL G+PG  G  G+ G D
Sbjct: 835 GPKG---DAGAAGLPGPDGYPGRDGLPGTPGYPGEAGLPGQDGLPGLPGTRGESGLVGID 891

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           G  G+DG  G  G +G  G  G  G  G++G++G PG P    Y
Sbjct: 892 GKRGRDGPVGPRGNDGAPGYRGEAGAPGQNGMDGYPGAPGDQGY 935



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 97/197 (49%), Gaps = 44/197 (22%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY 168
            PG  G  G+KG  G  GE G+ G RG+ G PG+ G     G  G PG  G+ G  GD+GY
Sbjct: 1154 PGQMGREGEKGYPGVPGENGLPGLRGQDGLPGLKGENGVDGQPGYPGSPGQLGTPGDVGY 1213

Query: 169  PGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------GLPGE--- 204
            PG        G+PG +G+ G +G+ G PG  GL GRD               G PG+   
Sbjct: 1214 PGAPGENGDNGLPGRDGQPGLRGENGQPGMPGLQGRDGQPGPVGPPGDDGYPGAPGQDTY 1273

Query: 205  -----------PGLDGI---PGRNGMDGIPGKDGLPGKDGIPGTNGTN---GEKGMTGPR 247
                       PGLDG+   PG NG  G PG+ G+PG  G+PG  G     GE+G+ G  
Sbjct: 1274 GPPGQAGQNGYPGLDGLSGGPGLNGEPGTPGQYGMPGLPGVPGEPGVTGYPGERGLPGID 1333

Query: 248  GNRGKSGINGVPGTPAI 264
            G RG  GI G PG P +
Sbjct: 1334 GKRGHDGIPGAPGNPGL 1350



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 77/162 (47%), Gaps = 28/162 (17%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G KGE G  G  GE G PG  G  GP+G PG  G  G +GD G         D G +G +
Sbjct: 43  GTKGERGNPGFGGEPGHPGAPGQDGPEGAPGAPGMFGAEGDFG---------DVGAKGAR 93

Query: 185 GDMGYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---------------KDGLP 226
           GD G PG     GL G DGLPG  G +GIPG NG DG PG                 G P
Sbjct: 94  GDRGLPGSPGHPGLQGLDGLPGLKGEEGIPGCNGTDGFPGIPGLAGPPGHPGPNGNPGRP 153

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G PG  G N  +G  G +G  G+ G+ G+PG P     K
Sbjct: 154 GLSGPPGEGGVN-SQGRKGEKGESGRPGVPGLPGNPGYPGLK 194



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 94/183 (51%), Gaps = 29/183 (15%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE--GKRGPKGDMGYPGPQGIPGD 177
           Q G  G +GE G+ G  G++G  G +G PG QG PGD   G+ GP G  G  G  G+PG 
Sbjct: 651 QDGFPGLRGEPGLSGIDGKRGRQGSLGLPGLQGPPGDSYPGQPGPPGFKGEAGANGLPGL 710

Query: 178 EGKRGPKGDMGYPGRI--------GLDGRDGLPGEPGLDGIPGRNGM---DGIPGKDGLP 226
            G +GP+G +  P RI        G+DG  GLPG+ G DG+PG  G    DG PG  G  
Sbjct: 711 PGAQGPRG-IPAPLRIINQVAGQPGVDGLPGLPGDRGADGLPGLPGPVGPDGYPGTPGER 769

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV------------PGTPAICAYKRESCSL 274
           G DG+PG  G +GE GM   RG +G+ G NG+            PG P +   + E+   
Sbjct: 770 GMDGVPGFPGLHGEPGM---RGQQGEVGFNGIDGDCGEPGQDGYPGQPGLPGAQGETGYG 826

Query: 275 LPN 277
            P 
Sbjct: 827 FPG 829



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 75/145 (51%), Gaps = 17/145 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PG QG  G  G  G  G+ G+KG RG+ G PG  G  G  G PG +G  GP         
Sbjct: 1387 PGQQGRSGDNGFPGQPGQPGIKGPRGDDGFPGRDGLDGLPGRPGFQGLPGPLAMEIRNPP 1446

Query: 163  --KGDMGYPGPQG---IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
               GD GYPG +G   +PGD G  GP G  GYPG  G   +DG PG+PGL G PG  G  
Sbjct: 1447 GLPGDNGYPGEKGYPGLPGDNGLPGPPGKAGYPGSPG---QDGYPGQPGLPGTPGNGGDQ 1503

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKG 242
            G  G+ G  G  G+PGT G  G  G
Sbjct: 1504 GFQGERGRTGHPGLPGTPGYPGSPG 1528



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 78/159 (49%), Gaps = 34/159 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G  G  G KG+ G  G+RG++G           G+PG  G++G KG+ G PG  
Sbjct: 282 GLDGPPGYPGLKGQKGDPGDAGQRGKRGK---------DGVPGSYGEKGTKGEQGVPGTP 332

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG-------EPGLDGIPGRNGMDGIPGKDGL 225
           G PG +G+    G+ GYPGR G +G  G  G       EPG  G     G DG+ G  GL
Sbjct: 333 GYPGVKGE---AGEPGYPGRPGFEGDCGPEGPLGEGTGEPGPRGA---QGFDGVQGAKGL 386

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           PG DG+PG            P G RG  G  G PG P I
Sbjct: 387 PGHDGLPG------------PVGPRGPVGAPGAPGMPGI 413



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 87/176 (49%), Gaps = 26/176 (14%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  GQKG+ G  G+ G +G+ G  G+ G  G  G QG+PG  G  G KG+ G PG
Sbjct: 286 PPGYPGLKGQKGDPGDAGQRGKRGKDGVPGSYGEKGTKGEQGVPGTPGYPGVKGEAGEPG 345

Query: 171 PQGIPGDEGKRGPKGDMGY----PGRIGLDGRDGLPGE---PGLDGIPG---------RN 214
             G PG EG  GP+G +G     PG  G  G DG+ G    PG DG+PG           
Sbjct: 346 YPGRPGFEGDCGPEGPLGEGTGEPGPRGAQGFDGVQGAKGLPGHDGLPGPVGPRGPVGAP 405

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G+PG DGLPG            EKG  G  G  G +G  G+PG P  C Y  E
Sbjct: 406 GAPGMPGIDGLPGYT----------EKGDRGEDGYPGFAGEPGLPGEPGDCGYPGE 451



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 86/190 (45%), Gaps = 47/190 (24%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G+ G  G+MG +GE+G  G PG  G PG   + G +G  G KG+ G  G  G PG  
Sbjct: 1146 GAPGQPGYPGQMGREGEKGYPGVPGENGLPG---LRGQDGLPGLKGENGVDGQPGYPGSP 1202

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIP--------------- 220
            G+ G  GD+GYPG  G +G +GLPG    DG P   G NG  G+P               
Sbjct: 1203 GQLGTPGDVGYPGAPGENGDNGLPGR---DGQPGLRGENGQPGMPGLQGRDGQPGPVGPP 1259

Query: 221  --------------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                                G++G PG DG+ G  G NGE G     G  G  G+ GVPG
Sbjct: 1260 GDDGYPGAPGQDTYGPPGQAGQNGYPGLDGLSGGPGLNGEPGTP---GQYGMPGLPGVPG 1316

Query: 261  TPAICAYKRE 270
             P +  Y  E
Sbjct: 1317 EPGVTGYPGE 1326



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/140 (44%), Positives = 78/140 (55%), Gaps = 6/140 (4%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G+ G +GE G PG+ G  G  G PG  G  G  G+ G+PG  G PG  G+ G +G+ GYP
Sbjct: 1107 GMPGLKGESGLPGLPGRQGNDGFPGQPGLEGECGEEGFPGAPGQPGYPGQMGREGEKGYP 1166

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMT 244
            G  G +G  GL G+ GL G+ G NG+DG PG  G PG+ G       PG  G NG+ G+ 
Sbjct: 1167 GVPGENGLPGLRGQDGLPGLKGENGVDGQPGYPGSPGQLGTPGDVGYPGAPGENGDNGLP 1226

Query: 245  GPRGNRGKSGINGVPGTPAI 264
            G  G  G  G NG PG P +
Sbjct: 1227 GRDGQPGLRGENGQPGMPGL 1246



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 73/139 (52%), Gaps = 9/139 (6%)

Query: 102 FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG--K 159
               T E  P G QG  G +G  G  G  G+ G  G +G  G  G PG  GI G  G  +
Sbjct: 362 LGEGTGEPGPRGAQGFDGVQGAKGLPGHDGLPGPVGPRGPVGAPGAPGMPGIDGLPGYTE 421

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G +G+ GYPG  G PG  G+    GD GYPG  GL G D + G PGLDG  GR+G  GI
Sbjct: 422 KGDRGEDGYPGFAGEPGLPGE---PGDCGYPGEDGLPGYD-IQGPPGLDGQSGRDGYPGI 477

Query: 220 P---GKDGLPGKDGIPGTN 235
           P   G  G PG+ G PGT 
Sbjct: 478 PGDIGDPGYPGEKGFPGTG 496



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 95/249 (38%), Gaps = 98/249 (39%)

Query: 113 GLQGPIGQK-GEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGIPGDEG------- 158
           G +GP+G+  GE G +G  G  G +G KG PG       VGP GP G PG  G       
Sbjct: 357 GPEGPLGEGTGEPGPRGAQGFDGVQGAKGLPGHDGLPGPVGPRGPVGAPGAPGMPGIDGL 416

Query: 159 ----KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
               ++G +G+ GYPG  G PG  G+    GD GYPG  GL G D + G PGLDG  GR+
Sbjct: 417 PGYTEKGDRGEDGYPGFAGEPGLPGE---PGDCGYPGEDGLPGYD-IQGPPGLDGQSGRD 472

Query: 215 GMDGIPGKDGLPG----------------------------------KDGIPGTNGTNGE 240
           G  GIPG  G PG                                  KDG PG  G NGE
Sbjct: 473 GYPGIPGDIGDPGYPGEKGFPGTGVNKVGPPGMPGLPGEPGMPGRIGKDGYPGPPGNNGE 532

Query: 241 KG------------------------------------------MTGPRGNRGKSGINGV 258
           +G                                            G  G  G  GI+G 
Sbjct: 533 RGDDCGYCPDGLPGNVGDAGFPGMNGYPGPPGPNGDHGDCGMPGAPGKPGAPGADGIDGS 592

Query: 259 PGTPAICAY 267
           PG P I  Y
Sbjct: 593 PGLPGIPGY 601



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 81/175 (46%), Gaps = 19/175 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G  G  G  G  G  G+ G +GAPG  G  G +G  GD G +G +GD G PG 
Sbjct: 42  PGTKGERGNPGFGGEPGHPGAPGQDGPEGAPGAPGMFGAEGDFGDVGAKGARGDRGLPGS 101

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------------EPGLDGIPGR 213
            G PG +G  G  G  G  G  G +G DG PG                   PGL G PG 
Sbjct: 102 PGHPGLQGLDGLPGLKGEEGIPGCNGTDGFPGIPGLAGPPGHPGPNGNPGRPGLSGPPGE 161

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G++   G+ G  G+ G PG  G  G  G  G +G +G  G  G+PG P +   K
Sbjct: 162 GGVNSQ-GRKGEKGESGRPGVPGLPGNPGYPGLKGAKGDPGPYGLPGFPGVSGLK 215



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 85/201 (42%), Gaps = 49/201 (24%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G+ G + ++G  G KGE G  G PG+ G PG  G+ G +G  GP G  G+PG 
Sbjct: 153 PGLSGPPGEGG-VNSQGRKGEKGESGRPGVPGLPGNPGYPGLKGAKGDPGPYGLPGFPGV 211

Query: 172 QGIPGDEGKR------------------------------------------------GP 183
            G+ G  G R                                                G 
Sbjct: 212 SGLKGRMGVRTSGVKGEKGLPGPPGPPGPPGSYPWASKPIEMEVLQGPVGPGGVKGEKGR 271

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G +G PG +GLDG  G PG  G  G PG  G  G  GKDG+PG  G  GT G  G  G 
Sbjct: 272 DGPVGPPGMLGLDGPPGYPGLKGQKGDPGDAGQRGKRGKDGVPGSYGEKGTKGEQGVPGT 331

Query: 244 TGPRGNRGKSGINGVPGTPAI 264
            G  G +G++G  G PG P  
Sbjct: 332 PGYPGVKGEAGEPGYPGRPGF 352



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 82/195 (42%), Gaps = 52/195 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------------PQGI 153
            PGL G  G  G  G  GE G  G RG+ G PG +  PG                  P G+
Sbjct: 1002 PGLPGADGLPGLAGEPGEPGQPGFRGQPGEPGNLAYPGQPGDIGYPGPDGPPGLAGPDGL 1061

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD------------GRDGL 201
            PG  G+RG  GD         PG+ G  G  GD GY    GLD            G  GL
Sbjct: 1062 PGLNGERGENGDS-------YPGNPGLNGQPGDAGY---DGLDGVPGPPGYPGITGMPGL 1111

Query: 202  PGEPGLDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             GE GL G+PGR G DG PG+             G PG+ G PG  G  GEKG  G  G 
Sbjct: 1112 KGESGLPGLPGRQGNDGFPGQPGLEGECGEEGFPGAPGQPGYPGQMGREGEKGYPGVPGE 1171

Query: 250  RGKSGINGVPGTPAI 264
             G  G+ G  G P +
Sbjct: 1172 NGLPGLRGQDGLPGL 1186



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 90/178 (50%), Gaps = 25/178 (14%)

Query: 109 YCPPGLQGPIGQKG---------------EIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           YCP GL G +G  G               + G  G  G  G+ G  GA G+ G PG  GI
Sbjct: 539 YCPDGLPGNVGDAGFPGMNGYPGPPGPNGDHGDCGMPGAPGKPGAPGADGIDGSPGLPGI 598

Query: 154 PGDEGKRGPKGDMGYP--GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           PG  G +G  G++  P   P GIPG +G RG     G PGR G DG  GLPG PG DG P
Sbjct: 599 PGYPGMKGEAGEIIGPMENPAGIPGLKGDRG---LPGLPGRQGNDGLPGLPGGPGQDGFP 655

Query: 212 ---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK--GMTGPRGNRGKSGINGVPGTPAI 264
              G  G+ GI GK G  G  G+PG  G  G+   G  GP G +G++G NG+PG P  
Sbjct: 656 GLRGEPGLSGIDGKRGRQGSLGLPGLQGPPGDSYPGQPGPPGFKGEAGANGLPGLPGA 713



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 81/181 (44%), Gaps = 39/181 (21%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGE---IGAKGE---MGVKGERGEKGAPGVVGPPGPQGIP 154
           GF         PG  GP G  G     GA+G+   +G KG RG++G PG  G PG QG+ 
Sbjct: 52  GFGGEPGHPGAPGQDGPEGAPGAPGMFGAEGDFGDVGAKGARGDRGLPGSPGHPGLQGLD 111

Query: 155 GDEGKRGPKGDMGYPGPQGIPG--------------------------------DEGKRG 182
           G  G +G +G  G  G  G PG                                 +G++G
Sbjct: 112 GLPGLKGEEGIPGCNGTDGFPGIPGLAGPPGHPGPNGNPGRPGLSGPPGEGGVNSQGRKG 171

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            KG+ G PG  GL G  G PG  G  G PG  G+ G PG  GL G+ G+  T+G  GEKG
Sbjct: 172 EKGESGRPGVPGLPGNPGYPGLKGAKGDPGPYGLPGFPGVSGLKGRMGVR-TSGVKGEKG 230

Query: 243 M 243
           +
Sbjct: 231 L 231



 Score = 42.7 bits (99), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 89/248 (35%), Gaps = 100/248 (40%)

Query: 113 GLQGPIGQKGEIGAKGEMGV-----------KGERGEKGAPGVVGPPGPQGIPGD----- 156
           GL GP+G +G +GA G  G+           KG+RGE G PG  G PG  G PGD     
Sbjct: 391 GLPGPVGPRGPVGAPGAPGMPGIDGLPGYTEKGDRGEDGYPGFAGEPGLPGEPGDCGYPG 450

Query: 157 ------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG------------- 191
                        G  G  G  GYPG   IPGD G  G  G+ G+PG             
Sbjct: 451 EDGLPGYDIQGPPGLDGQSGRDGYPG---IPGDIGDPGYPGEKGFPGTGVNKVGPPGMPG 507

Query: 192 ---------RIGLDG------------------RDGLPGE-------------------- 204
                    RIG DG                   DGLPG                     
Sbjct: 508 LPGEPGMPGRIGKDGYPGPPGNNGERGDDCGYCPDGLPGNVGDAGFPGMNGYPGPPGPNG 567

Query: 205 -------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE--KGMTGPRGNRGKSGI 255
                  PG  G PG  G DGI G  GLPG  G PG  G  GE    M  P G  G  G 
Sbjct: 568 DHGDCGMPGAPGKPGAPGADGIDGSPGLPGIPGYPGMKGEAGEIIGPMENPAGIPGLKGD 627

Query: 256 NGVPGTPA 263
            G+PG P 
Sbjct: 628 RGLPGLPG 635



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 66/150 (44%), Gaps = 56/150 (37%)

Query: 174 IPGDEGKRG-P--KGDMGYPGRIGLDGRDGLPGEPGL------------------DGIPG 212
            PG +G+RG P   G+ G+PG  G DG +G PG PG+                   G+PG
Sbjct: 41  CPGTKGERGNPGFGGEPGHPGAPGQDGPEGAPGAPGMFGAEGDFGDVGAKGARGDRGLPG 100

Query: 213 RNGMDGIPGKDGLP---GKDGIPGTNGTNG---------------------EKGMTGP-- 246
             G  G+ G DGLP   G++GIPG NGT+G                       G++GP  
Sbjct: 101 SPGHPGLQGLDGLPGLKGEEGIPGCNGTDGFPGIPGLAGPPGHPGPNGNPGRPGLSGPPG 160

Query: 247 ---------RGNRGKSGINGVPGTPAICAY 267
                    +G +G+SG  GVPG P    Y
Sbjct: 161 EGGVNSQGRKGEKGESGRPGVPGLPGNPGY 190


>gi|399164|sp|P32017.1|CO9A3_CHICK RecName: Full=Collagen alpha-3(IX) chain; Flags: Precursor
 gi|211041|gb|AAB59960.1| alpha-3 type IX collagen [Gallus gallus]
          Length = 675

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/205 (41%), Positives = 107/205 (52%), Gaps = 15/205 (7%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQG 152
           L    G   S  E   PG  G  G  GE G  G++G+ G+RG    +GA G VG PGP G
Sbjct: 334 LPGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDVGIPGDRGLPGPRGATGPVGLPGPIG 393

Query: 153 IPGDEGKRGPKG---DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            PG  G +GPKG   + G PGP GI G+ G RGP G +G  G  G+ G DGLPG+ G  G
Sbjct: 394 APGVRGFQGPKGSSGEPGLPGPTGIRGESGDRGPAGVIGAKGSQGIAGADGLPGDKGELG 453

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---TGPRGNRGKSGINGV---PGTPA 263
             G  G  G PGK G  G  G  G NGT G  G+    GP G++G+ G+ G+   PG P 
Sbjct: 454 PFGPPGQKGEPGKRGELGPKGAQGPNGTAGAPGIPGHPGPMGHQGEQGVPGITGKPGPPG 513

Query: 264 ICAYK---RESCSLLPNSETSQLLI 285
             A +   RE C  + N + +QL  
Sbjct: 514 KEASEQHIRELCGEMINDQIAQLAA 538



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 85/155 (54%), Gaps = 9/155 (5%)

Query: 112 PGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG+ G  G+ G  G  GE      MGV GE+G  G PG+   PG  GI G +G+ G  G+
Sbjct: 296 PGIPGKDGRDGAPGLDGEKGDAARMGVPGEKGPNGLPGL---PGRAGIKGSKGEPGSPGE 352

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           MG  GP G PG  G  G  GD G PG  G  G  GLPG  G  G+ G  G  G  G+ GL
Sbjct: 353 MGEAGPSGEPGIPGDVGIPGDRGLPGPRGATGPVGLPGPIGAPGVRGFQGPKGSSGEPGL 412

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  GI G +G  G  G+ G +G++G +G +G+PG
Sbjct: 413 PGPTGIRGESGDRGPAGVIGAKGSQGIAGADGLPG 447



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 86/162 (53%), Gaps = 18/162 (11%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G +GP G  G  G KG  G +G  GE   PG+ G  G  G PG +G++G    MG PG
Sbjct: 268 PQGFRGPKGDTGRPGPKGNPGARGLIGE---PGIPGKDGRDGAPGLDGEKGDAARMGVPG 324

Query: 171 ---PQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG------ 218
              P G+PG  G+   +G KG+ G PG +G  G  G PG PG  GIPG  G+ G      
Sbjct: 325 EKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDVGIPGDRGLPGPRGATG 384

Query: 219 ---IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              +PG  G PG  G  G  G++GE G+ GP G RG+SG  G
Sbjct: 385 PVGLPGPIGAPGVRGFQGPKGSSGEPGLPGPTGIRGESGDRG 426



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 70/139 (50%), Gaps = 9/139 (6%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           QG  G +G RGPKGD G PGP+G PG       +G +G PG  G DGRDG    PGLDG 
Sbjct: 263 QGNKGPQGFRGPKGDTGRPGPKGNPGA------RGLIGEPGIPGKDGRDGA---PGLDGE 313

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G     G+PG+ G  G  G+PG  G  G KG  G  G  G++G +G PG P       +
Sbjct: 314 KGDAARMGVPGEKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDVGIPGD 373

Query: 271 SCSLLPNSETSQLLIPPTI 289
                P   T  + +P  I
Sbjct: 374 RGLPGPRGATGPVGLPGPI 392



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 93/239 (38%), Gaps = 77/239 (32%)

Query: 79  STHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE 138
           S    P   + A     +    G      E  P    GP GQKGE G +GE+G KG +G 
Sbjct: 422 SGDRGPAGVIGAKGSQGIAGADGLPGDKGELGP---FGPPGQKGEPGKRGELGPKGAQGP 478

Query: 139 ---KGAPGVVGPPGP------QGIPGDEGKRGPKG------------------------- 164
               GAPG+ G PGP      QG+PG  GK GP G                         
Sbjct: 479 NGTAGAPGIPGHPGPMGHQGEQGVPGITGKPGPPGKEASEQHIRELCGEMINDQIAQLAA 538

Query: 165 ---------------------------DMGYPGPQGIP------GDEGKRGPKGDMGY-- 189
                                       +G+PG +G P      G+ G  GP+GD G   
Sbjct: 539 NLRKPLSPGMTGRPGPAGPPGPPGATGSVGHPGARGPPGYRGPTGELGDPGPRGDTGEKG 598

Query: 190 ---PGRIGLDGRDGLPGEPGLDGIPG--RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
              P   G+DG DG  G  GL G+PG  +NG DG  G+ GLPG  G PG  G  G  G+
Sbjct: 599 DKGPAGQGIDGPDGDQGPQGLPGVPGISKNGRDGAQGEPGLPGDPGTPGAVGAQGTPGI 657



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 60/128 (46%), Gaps = 39/128 (30%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G PG  GPPG          RGP G++G PGP+G  G++G +GP G        G+DG D
Sbjct: 568 GHPGARGPPG---------YRGPTGELGDPGPRGDTGEKGDKGPAGQ-------GIDGPD 611

Query: 200 GLPGEPGLDGIPG--RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  GL G+PG  +NG DG  G+ GLPG  G PG  G  G                  
Sbjct: 612 GDQGPQGLPGVPGISKNGRDGAQGEPGLPGDPGTPGAVGAQG------------------ 653

Query: 258 VPGTPAIC 265
              TP IC
Sbjct: 654 ---TPGIC 658


>gi|45384282|ref|NP_990636.1| collagen alpha-3(IX) chain precursor [Gallus gallus]
 gi|63317|emb|CAA45967.1| collagen-alpha-3 type IX [Gallus gallus]
          Length = 675

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/205 (41%), Positives = 107/205 (52%), Gaps = 15/205 (7%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQG 152
           L    G   S  E   PG  G  G  GE G  G++G+ G+RG    +GA G VG PGP G
Sbjct: 334 LPGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDVGIPGDRGLPGPRGATGPVGLPGPIG 393

Query: 153 IPGDEGKRGPKG---DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            PG  G +GPKG   + G PGP GI G+ G RGP G +G  G  G+ G DGLPG+ G  G
Sbjct: 394 APGVRGFQGPKGASGEPGLPGPTGIRGESGDRGPAGVIGAKGSQGIAGADGLPGDKGELG 453

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---TGPRGNRGKSGINGV---PGTPA 263
             G  G  G PGK G  G  G  G NGT G  G+    GP G++G+ G+ G+   PG P 
Sbjct: 454 PFGPPGQKGEPGKRGELGPKGAQGPNGTAGAPGIPGHPGPMGHQGEQGVPGITGKPGPPG 513

Query: 264 ICAYK---RESCSLLPNSETSQLLI 285
             A +   RE C  + N + +QL  
Sbjct: 514 KEASEQHIRELCGEMINDQIAQLAA 538



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 78/139 (56%), Gaps = 3/139 (2%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           GE G    MGV GE+G  G PG+   PG  GI G +G+ G  G+MG  GP G PG  G  
Sbjct: 312 GEKGDAARMGVPGEKGPNGLPGL---PGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDV 368

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G  GD G PG  G  G  GLPG  G  G+ G  G  G  G+ GLPG  GI G +G  G  
Sbjct: 369 GIPGDRGLPGPRGATGPVGLPGPIGAPGVRGFQGPKGASGEPGLPGPTGIRGESGDRGPA 428

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G+ G +G++G +G +G+PG
Sbjct: 429 GVIGAKGSQGIAGADGLPG 447



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 85/162 (52%), Gaps = 18/162 (11%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G +GP G  G  G KG  G +G  GE   PG+ G  G  G PG +G++G    MG PG
Sbjct: 268 PQGFRGPKGDTGRPGPKGNPGARGLIGE---PGIPGKDGRDGAPGLDGEKGDAARMGVPG 324

Query: 171 ---PQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG------ 218
              P G+PG  G+   +G KG+ G PG +G  G  G PG PG  GIPG  G+ G      
Sbjct: 325 EKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDVGIPGDRGLPGPRGATG 384

Query: 219 ---IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              +PG  G PG  G  G  G +GE G+ GP G RG+SG  G
Sbjct: 385 PVGLPGPIGAPGVRGFQGPKGASGEPGLPGPTGIRGESGDRG 426



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 70/139 (50%), Gaps = 9/139 (6%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           QG  G +G RGPKGD G PGP+G PG       +G +G PG  G DGRDG    PGLDG 
Sbjct: 263 QGNKGPQGFRGPKGDTGRPGPKGNPGA------RGLIGEPGIPGKDGRDGA---PGLDGE 313

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G     G+PG+ G  G  G+PG  G  G KG  G  G  G++G +G PG P       +
Sbjct: 314 KGDAARMGVPGEKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDVGIPGD 373

Query: 271 SCSLLPNSETSQLLIPPTI 289
                P   T  + +P  I
Sbjct: 374 RGLPGPRGATGPVGLPGPI 392



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 93/239 (38%), Gaps = 77/239 (32%)

Query: 79  STHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE 138
           S    P   + A     +    G      E  P    GP GQKGE G +GE+G KG +G 
Sbjct: 422 SGDRGPAGVIGAKGSQGIAGADGLPGDKGELGP---FGPPGQKGEPGKRGELGPKGAQGP 478

Query: 139 ---KGAPGVVGPPGP------QGIPGDEGKRGPKG------------------------- 164
               GAPG+ G PGP      QG+PG  GK GP G                         
Sbjct: 479 NGTAGAPGIPGHPGPMGHQGEQGVPGITGKPGPPGKEASEQHIRELCGEMINDQIAQLAA 538

Query: 165 ---------------------------DMGYPGPQGIP------GDEGKRGPKGDMGY-- 189
                                       +G+PG +G P      G+ G  GP+GD G   
Sbjct: 539 NLRKPLSPGMTGRPGPAGPPGPPGATGSVGHPGARGPPGYRGPTGELGDPGPRGDTGEKG 598

Query: 190 ---PGRIGLDGRDGLPGEPGLDGIPG--RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
              P   G+DG DG  G  GL G+PG  +NG DG  G+ GLPG  G PG  G  G  G+
Sbjct: 599 DKGPAGQGIDGPDGDQGPQGLPGVPGISKNGRDGAQGEPGLPGDPGTPGAVGAQGTPGI 657



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 60/128 (46%), Gaps = 39/128 (30%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G PG  GPPG          RGP G++G PGP+G  G++G +GP G        G+DG D
Sbjct: 568 GHPGARGPPG---------YRGPTGELGDPGPRGDTGEKGDKGPAGQ-------GIDGPD 611

Query: 200 GLPGEPGLDGIPG--RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  GL G+PG  +NG DG  G+ GLPG  G PG  G  G                  
Sbjct: 612 GDQGPQGLPGVPGISKNGRDGAQGEPGLPGDPGTPGAVGAQG------------------ 653

Query: 258 VPGTPAIC 265
              TP IC
Sbjct: 654 ---TPGIC 658


>gi|149039207|gb|EDL93427.1| procollagen, type V, alpha 1 [Rattus norvegicus]
          Length = 1840

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 80/157 (50%), Gaps = 36/157 (22%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------DEGKRGPK 163
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G  G      D G  GP 
Sbjct: 804 GLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPT 863

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G  G  G+PG  G++GPKG +G+P                           G PG +
Sbjct: 864 GEKGKLGVPGLPGYPGRQGPKGSIGFP---------------------------GFPGAN 896

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G PG  G  G++G TGPRG RG  GI G PG
Sbjct: 897 GEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPG 933



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 61/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1406 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 1462

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1463 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGI 1522



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 12/106 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G+ G  G  G +G  GE+G+ G P         G+PG  G++GPKG +G+P   
Sbjct: 843 GPEGPKGRGGPNGDPGPLGPTGEKGKLGVP---------GLPGYPGRQGPKGSIGFP--- 890

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           G PG  G++G +G  G PG  G  G  G  GE G  GI G+ G  G
Sbjct: 891 GFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 936



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 878 PGRQGP---KGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 934

Query: 172 QG 173
           +G
Sbjct: 935 KG 936



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG                   
Sbjct: 1406 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1465

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                     +G  GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1466 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1518



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G+KG++G  G  G  G +G KG+ G        G PG  G++G +G  G PGP
Sbjct: 857 PGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFP------GFPGANGEKGGRGTPGKPGP 910

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIG 194
              +G  G  G+RGP+G  G PG  G
Sbjct: 911 RGQRGPTGPRGERGPRGITGKPGPKG 936



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 61/160 (38%), Gaps = 57/160 (35%)

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGR------DGLPGEP----------------- 205
           PG QG+PG +G  GP G+ G  G+ GL         DG PG P                 
Sbjct: 728 PGAQGLPGPQGAIGPPGEKGPLGKPGL---PGMPGADGPPGHPGKEGPPGEKGGQGPPGP 784

Query: 206 -------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN--- 249
                        G DGI G  G  G  G+DG PG  G  G  G  GE G  GPRG    
Sbjct: 785 QGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGP 844

Query: 250 ---RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
              +G+ G NG PG             L P  E  +L +P
Sbjct: 845 EGPKGRGGPNGDPGP------------LGPTGEKGKLGVP 872



 Score = 39.7 bits (91), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 69/185 (37%), Gaps = 78/185 (42%)

Query: 139 KGAPGVVGPPGPQGI---------------PGDEGKRG------PKGDMGYPGPQGIPGD 177
           KG PG +GP GP+G+                G +G RG      PKGD G+ G  G+PG+
Sbjct: 584 KGEPGDMGPQGPRGVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGE 643

Query: 178 EGKR------------------------GPKGDMGYPGR------------------IGL 195
           +G R                        GP+G  G PG                    G+
Sbjct: 644 KGHRGDPGPSGPPGLPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGM 703

Query: 196 DGRDGLPG---------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           DG+ G  G                PG  G+PG  G  G PG+ G  GK G+PG  G +G 
Sbjct: 704 DGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGP 763

Query: 241 KGMTG 245
            G  G
Sbjct: 764 PGHPG 768


>gi|395851085|ref|XP_003798097.1| PREDICTED: collagen alpha-3(V) chain [Otolemur garnettii]
          Length = 1696

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 93/201 (46%), Gaps = 33/201 (16%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEI---------------------------GAKGEMGVK 133
            GF   T    P G+ GP G+ GE+                           GAKGE+G  
Sbjct: 884  GFQGQTGPPGPAGILGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPS 943

Query: 134  GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYP 190
            G  G++G  G  G PGPQG PGD G  G KGD G PGP G    PG+ G  GP G +G P
Sbjct: 944  GPLGKEGPAGPRGFPGPQGHPGDLGPPGLKGDKGPPGPTGANGPPGERGPVGPAGGIGLP 1003

Query: 191  GRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
            G+ G  G  G  GE   PG  G PG  G DGIPG  G  G  G  G +G  G+KG  G  
Sbjct: 1004 GQSGGQGPVGPAGEKGSPGERGPPGPTGKDGIPGPLGPLGPSGPAGPSGEEGDKGEVGAP 1063

Query: 248  GNRGKSGINGVPGTPAICAYK 268
            G++G  G  G  G P     +
Sbjct: 1064 GHKGSKGDKGDVGPPGPTGIR 1084



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 85/174 (48%), Gaps = 24/174 (13%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGP-- 150
            L   +G    T    PPG +GP+G  G IG  G+ G +G     GEKG+PG  GPPGP  
Sbjct: 972  LKGDKGPPGPTGANGPPGERGPVGPAGGIGLPGQSGGQGPVGPAGEKGSPGERGPPGPTG 1031

Query: 151  -QGIPGDEGKRGPKGDMGYPGPQG------IPGDEGKRGPKGDMGYPGRIGL-------- 195
              GIPG  G  GP G  G  G +G       PG +G +G KGD+G PG  G+        
Sbjct: 1032 KDGIPGPLGPLGPSGPAGPSGEEGDKGEVGAPGHKGSKGDKGDVGPPGPTGIRGPVGHPG 1091

Query: 196  ----DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                DG  G  G PGL G  G +G+ G  G  G PG  G+PG  G  GE G  G
Sbjct: 1092 PPGADGAQGRRGLPGLFGHKGDDGVRGFVGMIGPPGLQGLPGPPGEKGEVGDVG 1145



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 80/176 (45%), Gaps = 27/176 (15%)

Query: 112  PGLQGPIGQKGEIGAK------------------------GEMGVKGERGEKGAPGVVGP 147
            PGL G +GQ G +G K                        GE G  G  G  G PG  GP
Sbjct: 1168 PGLPGGVGQPGAVGEKGEPGEPGDPGPPGTPGIPGPKGEVGEKGDTGPSGAAGPPGKKGP 1227

Query: 148  PGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             G  G  G+ G  G  GD+G PG     GI G  G++G  GD+G PG  G  G  G PG 
Sbjct: 1228 SGEDGAKGNVGPTGLPGDLGPPGDPGVSGIDGPSGEKGDPGDVGAPGPPGASGEAGTPGP 1287

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG  G PGR G +G  G+ G  G+ G  G  G  G  G  GP G  G  G+ G+PG
Sbjct: 1288 PGKRGTPGREGREGKEGEKGAKGEPGPDGPLGRTGPVGARGPPGRVGPEGLQGIPG 1343



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 88/170 (51%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G+ G  G KG+ G+ GE G  G  G  G  G  G+PG  G+ GPKG +G+PGP
Sbjct: 730 PGPSGPRGEDGPEGLKGQEGLAGEEGPSGLAGEKGKLGVPGLPGYPGRPGPKGSIGFPGP 789

Query: 172 QGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G++GKRG       +G+ G PG  G  G+ G  G+PG  G  G++G  GIPG+ GL
Sbjct: 790 LGPIGEKGKRGKMGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGPPGIPGEKGL 849

Query: 226 ------------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                              GKDG PG +G  GE G  G  G  G +GI G
Sbjct: 850 LGLQGPPGFPGPKGPPGPQGKDGRPGHSGQRGELGFQGQTGPPGPAGILG 899



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 87/194 (44%), Gaps = 36/194 (18%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ GP G+KG+ G  G  G  G  GE G PG   PPG +G PG EG+ G +G+ G  G  
Sbjct: 1256 GIDGPSGEKGDPGDVGAPGPPGASGEAGTPG---PPGKRGTPGREGREGKEGEKGAKGEP 1312

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGLD--------------------- 208
            G  G  G+ GP G  G PGR+G +G  G+PG   EPGL                      
Sbjct: 1313 GPDGPLGRTGPVGARGPPGRVGPEGLQGIPGPVGEPGLLGPPGQIGPPGPLGPSGLPGLK 1372

Query: 209  ---GIPGRNGMDGI------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
               G+ G  G  G+      PG+ G  G  G+PG  G  G KG TGP G  G  G  G P
Sbjct: 1373 GDAGLKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDTGPPGPIGSLGPPGSP 1432

Query: 260  GTPAICAYKRESCS 273
            G       K    S
Sbjct: 1433 GVAGPLGQKGSKGS 1446



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 79/157 (50%), Gaps = 15/157 (9%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           ++GP G  G  G  G +G+ G+ G KG  GV+GP GP+G+ G  G  G  G MG PG  G
Sbjct: 483 MKGPPGPVGLTGRPGPVGLPGQPGSKGEGGVMGPQGPRGLQGPHGPPGQVGKMGRPGADG 542

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG--------- 224
             G  G  GPKGD G+      DG  GLPGE G  G  G  G  G PG+DG         
Sbjct: 543 ARGLPGDTGPKGDRGF------DGLPGLPGEKGQKGNFGHVGQPGPPGEDGKRGPEGPPG 596

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G+ G PG  G  G +G  G  G  G  GI+G PG 
Sbjct: 597 PTGQAGEPGPRGLIGSRGSPGSPGRPGVVGIDGAPGA 633



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 78/142 (54%), Gaps = 18/142 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKR------GPK 163
           G  GP+G  G+ G+KGE GV G +G +G  G  GPPG     G PG +G R      GPK
Sbjct: 494 GRPGPVGLPGQPGSKGEGGVMGPQGPRGLQGPHGPPGQVGKMGRPGADGARGLPGDTGPK 553

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR---------DGLPGEPGLDGIPGRN 214
           GD G+ G  G+PG++G++G  G +G PG  G DG+          G  GEPG  G+ G  
Sbjct: 554 GDRGFDGLPGLPGEKGQKGNFGHVGQPGPPGEDGKRGPEGPPGPTGQAGEPGPRGLIGSR 613

Query: 215 GMDGIPGKDGLPGKDGIPGTNG 236
           G  G PG+ G+ G DG PG  G
Sbjct: 614 GSPGSPGRPGVVGIDGAPGAKG 635



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 81/165 (49%), Gaps = 21/165 (12%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G++G +G  G +G+ G+ G +G    VGP G +G PG+ G  GP G  G PG
Sbjct: 981  PTGANGPPGERGPVGPAGGIGLPGQSGGQGP---VGPAGEKGSPGERGPPGPTGKDGIPG 1037

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM------------DG 218
            P G  G  G  GP G+ G  G +G  G  G  G+ G  G PG  G+            DG
Sbjct: 1038 PLGPLGPSGPAGPSGEEGDKGEVGAPGHKGSKGDKGDVGPPGPTGIRGPVGHPGPPGADG 1097

Query: 219  IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              G+ GLPG  G  G +G  G  GM GP       G+ G+PG P 
Sbjct: 1098 AQGRRGLPGLFGHKGDDGVRGFVGMIGP------PGLQGLPGPPG 1136



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 82/169 (48%), Gaps = 30/169 (17%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------------------- 156
            G+ G  G +GE+G +G+ G  G  G++GP   QG  G+                      
Sbjct: 872  GRPGHSGQRGELGFQGQTGPPGPAGILGP---QGKTGEVGPLGERGPPGPPGPPGEQGLP 928

Query: 157  --EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDGIP 211
              EG+ G KG++G  GP G  G  G RG  G  G+PG +   GL G  G PG  G +G P
Sbjct: 929  GLEGREGAKGELGPSGPLGKEGPAGPRGFPGPQGHPGDLGPPGLKGDKGPPGPTGANGPP 988

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G  G  GLPG+ G  G  G  GEKG  G RG  G +G +G+PG
Sbjct: 989  GERGPVGPAGGIGLPGQSGGQGPVGPAGEKGSPGERGPPGPTGKDGIPG 1037



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 88/236 (37%), Gaps = 87/236 (36%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV---------------------------KGERGEKGAPGV 144
            PG +G +GQ G  G  GE G+                            G+RGE G  G 
Sbjct: 829  PGPKGDVGQDGPPGIPGEKGLLGLQGPPGFPGPKGPPGPQGKDGRPGHSGQRGELGFQGQ 888

Query: 145  VGPPGPQGIPGDE---------------------------------------------GK 159
             GPPGP GI G +                                             GK
Sbjct: 889  TGPPGPAGILGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPSGPLGK 948

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------------GLPGEPGL 207
             GP G  G+PGPQG PGD G  G KGD G PG  G +G              GLPG+ G 
Sbjct: 949  EGPAGPRGFPGPQGHPGDLGPPGLKGDKGPPGPTGANGPPGERGPVGPAGGIGLPGQSGG 1008

Query: 208  DGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  G PG+ G P   GKDGIPG  G  G  G  GP G  G  G  G PG
Sbjct: 1009 QGPVGPAGEKGSPGERGPPGPTGKDGIPGPLGPLGPSGPAGPSGEEGDKGEVGAPG 1064



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 96/242 (39%), Gaps = 65/242 (26%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------------ 166
            G +G  G  G  G KG+ G +G  G++GPPG QG+PG  G++G  GD+            
Sbjct: 1097 GAQGRRGLPGLFGHKGDDGVRGFVGMIGPPGLQGLPGPPGEKGEVGDVGSMGPPGAPGPR 1156

Query: 167  ------------GYPGPQGIPG------------------------------DEGKRGPK 184
                        G PG  G PG                              ++G  GP 
Sbjct: 1157 GPLGPSGSEGSPGLPGGVGQPGAVGEKGEPGEPGDPGPPGTPGIPGPKGEVGEKGDTGPS 1216

Query: 185  GDMGYPGRIGLDGRD---------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            G  G PG+ G  G D         GLPG+ G  G PG +G+DG  G+ G PG  G PG  
Sbjct: 1217 GAAGPPGKKGPSGEDGAKGNVGPTGLPGDLGPPGDPGVSGIDGPSGEKGDPGDVGAPGPP 1276

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI--PPTIVGSE 293
            G +GE G  GP G RG  G  G  G       K E     P   T  +    PP  VG E
Sbjct: 1277 GASGEAGTPGPPGKRGTPGREGREGKEGEKGAKGEPGPDGPLGRTGPVGARGPPGRVGPE 1336

Query: 294  HI 295
             +
Sbjct: 1337 GL 1338



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/118 (44%), Positives = 65/118 (55%), Gaps = 3/118 (2%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GP GP+G  G EG +G +G  G  GP G+ G++GK G  G  GYPGR G  G  G PG  
Sbjct: 731 GPSGPRGEDGPEGLKGQEGLAGEEGPSGLAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPL 790

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  G+ G  G P   GL G+ G PG+ G  G+ G TG  G +G  G +G PG P 
Sbjct: 791 GPIGEKGKRGKMGQP---GLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGPPGIPG 845



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 80/168 (47%), Gaps = 27/168 (16%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G++G  G +GE G KGE G  G  G  GP G +G P   G+ GP+G  G PG
Sbjct: 1287 PPGKRGTPGREGREGKEGEKGAKGEPGPDGPLGRTGPVGARGPP---GRVGPEGLQGIPG 1343

Query: 171  PQGIPG---------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            P G PG                      +G  G KG+ G+ G IGL G  G  GE G  G
Sbjct: 1344 PVGEPGLLGPPGQIGPPGPLGPSGLPGLKGDAGLKGEKGHIGLIGLIGPPGEAGEKGDQG 1403

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            +P   G+ G PG  G  G  G  G+ G  G  G+ GP G +G  G  G
Sbjct: 1404 LP---GVQGPPGPKGDTGPPGPIGSLGPPGSPGVAGPLGQKGSKGSPG 1448



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 86/217 (39%), Gaps = 72/217 (33%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------------- 153
            G  GP G  GE G KGE+G  G +G KG  G VGPPGP GI                   
Sbjct: 1043 GPSGPAGPSGEEGDKGEVGAPGHKGSKGDKGDVGPPGPTGIRGPVGHPGPPGADGAQGRR 1102

Query: 154  --------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG----------------- 188
                     GD+G RG  G +G PG QG+PG  G++G  GD+G                 
Sbjct: 1103 GLPGLFGHKGDDGVRGFVGMIGPPGLQGLPGPPGEKGEVGDVGSMGPPGAPGPRGPLGPS 1162

Query: 189  -YPGRIGLDGRDGLPG---------------------------EPGLDGIPGRNGMDGIP 220
               G  GL G  G PG                           E G  G  G +G  G P
Sbjct: 1163 GSEGSPGLPGGVGQPGAVGEKGEPGEPGDPGPPGTPGIPGPKGEVGEKGDTGPSGAAGPP 1222

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GK G  G+DG  G  G  G  G  GP G+ G SGI+G
Sbjct: 1223 GKKGPSGEDGAKGNVGPTGLPGDLGPPGDPGVSGIDG 1259



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 85/185 (45%), Gaps = 42/185 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GPIG+KG+ G  G+ G++GERG  G+ G       +G PG  G+ GPKGD+G  GP
Sbjct: 787 PGPLGPIGEKGKRGKMGQPGLEGERGPPGSRGE------RGQPGATGQPGPKGDVGQDGP 840

Query: 172 QGIPGDEG---------------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            GIPG++G                     K G  G  G  G +G  G+ G PG  G+ G 
Sbjct: 841 PGIPGEKGLLGLQGPPGFPGPKGPPGPQGKDGRPGHSGQRGELGFQGQTGPPGPAGILGP 900

Query: 211 PGRNG---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G+ G                 G  G  GL G++G  G  G +G  G  GP G RG  G 
Sbjct: 901 QGKTGEVGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPSGPLGKEGPAGPRGFPGP 960

Query: 256 NGVPG 260
            G PG
Sbjct: 961 QGHPG 965



 Score = 42.7 bits (99), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 30/117 (25%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMG 167
           P GLQGP G  G++G   +MG  G  G +G PG  GP G +G   +PG  G++G KG+ G
Sbjct: 519 PRGLQGPHGPPGQVG---KMGRPGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQKGNFG 575

Query: 168 YPGPQGIPGDEGKR---------------GPKG---------DMGYPGRIGLDGRDG 200
           + G  G PG++GKR               GP+G           G PG +G+DG  G
Sbjct: 576 HVGQPGPPGEDGKRGPEGPPGPTGQAGEPGPRGLIGSRGSPGSPGRPGVVGIDGAPG 632


>gi|403301638|ref|XP_003941493.1| PREDICTED: collagen alpha-1(II) chain isoform 1 [Saimiri boliviensis
            boliviensis]
          Length = 1487

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 92/198 (46%), Gaps = 33/198 (16%)

Query: 97   VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
               +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 815  AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 874

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
            QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 875  QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 934

Query: 187  MGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G PGR    GL G  G PGE G  G  G +G DG PG  GL G+ GI G  G  GE+G 
Sbjct: 935  SGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 994

Query: 244  TGPRGNRGKSGINGVPGT 261
             G  G  G+ G  G PG 
Sbjct: 995  PGLPGPSGEPGKQGAPGA 1012



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 447 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 506

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 507 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 566

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 567 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 626

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 627 GLRGLPG 633



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 84/187 (44%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 860

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 920

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ 
Sbjct: 921 GPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQR 980

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 981 GIVGLPG 987



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 434

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 435 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 494

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 495 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 551

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 552 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 580



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 638

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 698

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RGN G  G+    G+PGTP     K  S
Sbjct: 699 GERGFPGERGNPGAQGLQGPRGLPGTPGTDGPKGAS 734



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 750 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 804 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 860

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 714 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 763

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 764 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 821

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 822 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 876



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 85/195 (43%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G  G  G++G RG  G PG  GP G               
Sbjct: 688 EAGAPGLVGPRGERGFPGERGNPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 747

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 808 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 858

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 859 DAGAPGPQGPSGAPG 873



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 851  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 910

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 911  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGP 970

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 971  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1030

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1031 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1061



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 85/199 (42%), Gaps = 30/199 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            PG  G  G +G PG+ G+ GP G  G+ GP G  G  G +G +G+ G  G  G  G  G
Sbjct: 808 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 867

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------------TNGEKGMTG 245
             G PG  G  G  G  G  G  G PG  G PG  G                 G  G  G
Sbjct: 868 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDG 927

Query: 246 PRGNRGKSGINGVPGTPAI 264
           P+G RG SG  G  G P +
Sbjct: 928 PKGARGDSGPPGRAGDPGL 946



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 374 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 427

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 428 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 487

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 488 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 547

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 548 PGRPGEPGLPGAR 560



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 683 QGVPGEAGAPGLVGPRGERGFPGERGNPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 742

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 743 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 802

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 803 KGEVGPPGPAGSAGARGAPG 822



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 284 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 343

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 403

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 404 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 460

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 461 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 491



 Score = 39.7 bits (91), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 76/165 (46%), Gaps = 33/165 (20%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP G +G  G +G +G+ G+RGE+G PG+ GP                   G PG
Sbjct: 964  PSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGP------------------SGEPG 1005

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------ 224
             QG PG  G RGP G +G PG  G  G  G  G PG DG PGR+G  G+ G  G      
Sbjct: 1006 KQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAAG 1065

Query: 225  ---------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      PG  G  G  G  GE G  GP G  G +G  G+PG
Sbjct: 1066 APGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIPG 1110



 Score = 39.7 bits (91), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 27/95 (28%)

Query: 112  PGLQGPIGQKGEIGAKGE------------------------MGVKGERGEKGAPGVVGP 147
            PG  GP G+ G  G KG+                         G +G+RGE GA G +GP
Sbjct: 1040 PGADGPPGRDGAAGVKGDRGETGAAGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGP 1099

Query: 148  PGP---QGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
             GP   +GIPG +G RG KG+ G PG +G+ G  G
Sbjct: 1100 SGPAGARGIPGPQGPRGDKGEAGEPGERGLKGHRG 1134


>gi|410046782|ref|XP_003952257.1| PREDICTED: collagen alpha-1(II) chain [Pan troglodytes]
          Length = 1443

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 771 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 830

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 831 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 890

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 891 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 941

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 942 PGQRGERGFPGLPG 955



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 403 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 462

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 463 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 522

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 523 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 582

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 583 GLRGLPG 589



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 757 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 816

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 817 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 876

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 877 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 936

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 937 GIVGLPG 943



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 331 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 390

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 391 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 450

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 451 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 507

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 508 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 536



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 644 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 703

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 704 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 763

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 764 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 814

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 815 DAGAPGPQGPSGAPG 829



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 706 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 759

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 760 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 816

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 817 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 859



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 670 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 719

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 720 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 777

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 778 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 832



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 478 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 537

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 538 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 594

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 595 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 654

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 655 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 690



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 81/178 (45%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 883  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 935

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 936  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 993

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG  G  G  GE                   G TG +G+RG++G  G
Sbjct: 994  GSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1051



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 807  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 866

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 867  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 926

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 927  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 986

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 987  AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1017



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 330 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 383

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 384 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 443

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 444 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 503

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 504 PGRPGEPGLPGAR 516



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 643 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 702

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 703 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 762

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 763 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 810



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 639 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 698

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 699 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 758

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 759 KGEVGPPGPAGSAGARGAPG 778



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 240 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 299

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 300 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 359

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 360 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 416

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 417 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 447



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 173 GIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG  G+RGP   +G  G+PG  GL G  G  G PGLDG  G  G  G+ G+ G PG++
Sbjct: 214 GKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN 273

Query: 230 GIPGTNGTNG 239
           G PG  G  G
Sbjct: 274 GSPGPMGPRG 283



 Score = 39.3 bits (90), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 77/188 (40%), Gaps = 48/188 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G +GP G +G  G +G +G+ G+RGE+G PG+   PGP G PG               
Sbjct: 920  PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL---PGPSGEPGK-------------- 962

Query: 171  PQGIPG---------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------ 215
             QG PG           G  G  G  G PGR G  G DG PG  G  G+ G  G      
Sbjct: 963  -QGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVG 1021

Query: 216  ---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                             G  G  G  G  G  G +G  G +G+ GP+G RG  G  G PG
Sbjct: 1022 APGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPG 1081

Query: 261  TPAICAYK 268
               +  ++
Sbjct: 1082 ERGLKGHR 1089


>gi|327281188|ref|XP_003225331.1| PREDICTED: collagen alpha-1(III) chain-like [Anolis carolinensis]
          Length = 1461

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/162 (43%), Positives = 88/162 (54%), Gaps = 30/162 (18%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G  GP+G  G  G KGE GV GE+G  GA G  G PGP GI G  G+RG    +G PG
Sbjct: 907  PAGSTGPVGSPGAAGPKGEPGVPGEKGPSGARGEPGSPGPSGILGPPGQRG---IVGLPG 963

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------PGLDGIPGRNGMDGIPG 221
             +G+PG  G  GP+G+ G P      G +G PGE         PG+ G PG  G DG  G
Sbjct: 964  MRGLPGPSGLSGPRGEDGKP------GSNGSPGERGPPGAQGPPGISGTPGEPGRDGNAG 1017

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             DGLPG+D            G +GP+G+RG++G  G+PG P 
Sbjct: 1018 SDGLPGRD------------GSSGPKGDRGENGSPGLPGAPG 1047



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 90/192 (46%), Gaps = 21/192 (10%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------- 153
            G   ST     PG  GP G+ G  G KG  G +GE G  G  G++GPPG +GI       
Sbjct: 906  GPAGSTGPVGSPGAAGPKGEPGVPGEKGPSGARGEPGSPGPSGILGPPGQRGIVGLPGMR 965

Query: 154  --PGDEGKRGPKGDMGYPGPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEP 205
              PG  G  GP+G+ G PG  G PG+ G  G        G  G PGR G  G DGLPG  
Sbjct: 966  GLPGPSGLSGPRGEDGKPGSNGSPGERGPPGAQGPPGISGTPGEPGRDGNAGSDGLPGRD 1025

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE------KGMTGPRGNRGKSGINGVP 259
            G  G  G  G +G PG  G PG  G PG +G  G+       G  GP G  G +GI G P
Sbjct: 1026 GSSGPKGDRGENGSPGLPGAPGHVGPPGNSGPAGKPGDRGHPGPAGPVGPSGPAGIRGAP 1085

Query: 260  GTPAICAYKRES 271
            G       K E+
Sbjct: 1086 GPAGARGDKGEA 1097



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 96/250 (38%), Gaps = 78/250 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G+ G+ GAKGE G +GERGE G PG  GPPG +G  G  G+ G  G  G PG 
Sbjct: 425 PGQRGPSGEPGKNGAKGEPGQRGERGENGTPGAAGPPGEEGKAGAAGQPGTNGIPGSPGE 484

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGL------------------DGRDGLPGEPGLDGI--- 210
           +G P   G RGP G  G PG  G                    GRDG PG PG+ G+   
Sbjct: 485 RGSP---GFRGPAGSNGPPGEKGAPGERGGPGAPGPRGVQGESGRDGSPGLPGMRGLTGS 541

Query: 211 ---------------------------------------PGRNGMDGIPGKDGLPGKDGI 231
                                                  PG  G +G PGK+G  G  G 
Sbjct: 542 PGAPGSDGKPGPGGPPGESGRSGPPGPAGPRGQPGVMGFPGPKGSEGAPGKNGERGSSGP 601

Query: 232 PGTNGTNGEKGMTGP---------------RGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           PGT G  G+ G  G                +G  G  G  G+PG+P       +     P
Sbjct: 602 PGTQGPAGKDGEAGAQGPPGPGGPPGEKGDQGAPGTPGFQGLPGSPGPAGENGKPGEAGP 661

Query: 277 NSETSQLLIP 286
             E     +P
Sbjct: 662 RGENGGPGLP 671



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 78/148 (52%), Gaps = 15/148 (10%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           AKG  G  G  G  G  G  GPPGP G  G  G+RGP G+ G  G +G PG  G+RG  G
Sbjct: 394 AKGLPGSAGMTGPPGLSGARGPPGPAGTNGIPGQRGPSGEPGKNGAKGEPGQRGERGENG 453

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G  G  G +G+ G  G+PG +GIPG       PG+ G PG  G  G+NG  GEKG  G
Sbjct: 454 TPGAAGPPGEEGKAGAAGQPGTNGIPGS------PGERGSPGFRGPAGSNGPPGEKGAPG 507

Query: 246 PRGN---------RGKSGINGVPGTPAI 264
            RG          +G+SG +G PG P +
Sbjct: 508 ERGGPGAPGPRGVQGESGRDGSPGLPGM 535



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 57/108 (52%)

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G+PG  G  GP G  G  G  G  G +G+PG+ G  G PG+NG  G PG+ G  G++G 
Sbjct: 395 KGLPGSAGMTGPPGLSGARGPPGPAGTNGIPGQRGPSGEPGKNGAKGEPGQRGERGENGT 454

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
           PG  G  GE+G  G  G  G +GI G PG      ++  + S  P  E
Sbjct: 455 PGAAGPPGEEGKAGAAGQPGTNGIPGSPGERGSPGFRGPAGSNGPPGE 502



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/99 (47%), Positives = 53/99 (53%), Gaps = 3/99 (3%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G  G  G  G  G KG+RGE G+PG+ G PG  G PG+ G  G  GD G+PGP
Sbjct: 1010 PGRDGNAGSDGLPGRDGSSGPKGDRGENGSPGLPGAPGHVGPPGNSGPAGKPGDRGHPGP 1069

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G     G  GP G  G PG  G  G  G  GE GL+GI
Sbjct: 1070 AGP---VGPSGPAGIRGAPGPAGARGDKGEAGERGLNGI 1105



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 65/128 (50%), Gaps = 12/128 (9%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------KGDMGYPGP 171
           +G  G  G++G  G  GERG  G PG  GP G  G  G +G  GP      KGD G PG 
Sbjct: 578 MGFPGPKGSEGAPGKNGERGSSGPPGTQGPAGKDGEAGAQGPPGPGGPPGEKGDQGAPGT 637

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G  G  G  GP G+ G PG  G  G +G P      G+PG  G +GIPG+ G  G  G 
Sbjct: 638 PGFQGLPGSPGPAGENGKPGEAGPRGENGGP------GLPGSKGENGIPGERGAQGPPGS 691

Query: 232 PGTNGTNG 239
           PGT G+ G
Sbjct: 692 PGTRGSPG 699



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 73/165 (44%), Gaps = 36/165 (21%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------------VVGPPGPQG 152
            PPG +G +G  G  G  G  G+ G RGE G PG                  +       G
Sbjct: 952  PPGQRGIVGLPGMRGLPGPSGLSGPRGEDGKPGSNGSPGERGPPGAQGPPGI------SG 1005

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
             PG+ G+ G  G        G+PG +G  GPKGD G       +G  GLPG PG  G PG
Sbjct: 1006 TPGEPGRDGNAGS------DGLPGRDGSSGPKGDRGE------NGSPGLPGAPGHVGPPG 1053

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             +G  G PG  G PG  G  G +G  G +G  GP G RG  G  G
Sbjct: 1054 NSGPAGKPGDRGHPGPAGPVGPSGPAGIRGAPGPAGARGDKGEAG 1098



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 92/226 (40%), Gaps = 66/226 (29%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPGVVGPP 148
           G   S  E   PG +GP G  G  G KG  G            V+GE G  G+PG+   P
Sbjct: 477 GIPGSPGERGSPGFRGPAGSNGPPGEKGAPGERGGPGAPGPRGVQGESGRDGSPGL---P 533

Query: 149 GPQGIPGDEGKRGPKGD---------------------------MGYPGPQGIPGDEGKR 181
           G +G+ G  G  G  G                            MG+PGP+G  G  GK 
Sbjct: 534 GMRGLTGSPGAPGSDGKPGPGGPPGESGRSGPPGPAGPRGQPGVMGFPGPKGSEGAPGKN 593

Query: 182 GPKGDMGYPGRIGLDGRD---------------------GLPGEPGLDGIPGR---NGMD 217
           G +G  G PG  G  G+D                     G PG PG  G+PG     G +
Sbjct: 594 GERGSSGPPGTQGPAGKDGEAGAQGPPGPGGPPGEKGDQGAPGTPGFQGLPGSPGPAGEN 653

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G PG+ G  G++G PG  G+ GE G+ G RG +G  G  G  G+P 
Sbjct: 654 GKPGEAGPRGENGGPGLPGSKGENGIPGERGAQGPPGSPGTRGSPG 699



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 52/100 (52%), Gaps = 6/100 (6%)

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG---RIGLDGRDGLPGEPGLDGIPGRNG 215
           K G  G  G PG +G+PG  G +GP G  G PG     G DGRDG  G+    G PG  G
Sbjct: 229 KDGESGRPGRPGERGLPGPPGHKGPSGMPGLPGMKGHRGFDGRDGAKGD---SGAPGLKG 285

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            +G+PG++G PG  G  G  G  G  G+ G  G RG  G 
Sbjct: 286 ENGLPGENGSPGPMGPRGQPGERGRAGLPGTAGARGNDGT 325



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 59/136 (43%), Positives = 70/136 (51%), Gaps = 15/136 (11%)

Query: 111 PPGLQGPIGQ---------KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
           P G QGP G+          G  G  G  G  G+ GE G PG    PG +G+PG  G +G
Sbjct: 196 PHGYQGPPGENGQPGSPGPVGPPGMIGPPGPAGKDGESGRPGR---PGERGLPGPPGHKG 252

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           P G  G PG +G  G +G+ G KGD G P   GL G +GLPGE G  G  G  G  G  G
Sbjct: 253 PSGMPGLPGMKGHRGFDGRDGAKGDSGAP---GLKGENGLPGENGSPGPMGPRGQPGERG 309

Query: 222 KDGLPGKDGIPGTNGT 237
           + GLPG  G  G +GT
Sbjct: 310 RAGLPGTAGARGNDGT 325



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 84/211 (39%), Gaps = 63/211 (29%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
           G  GP G  G  GA+G  G +GE G  G  G  G PG  G PG +G +GP G+       
Sbjct: 780 GEPGPAGPHGPTGARGGPGDRGESGPPGPAGFPGAPGQNGEPGGKGDKGPAGERGEPGPP 839

Query: 166 --------------------------------MGYPGPQGI---------------PGDE 178
                                            G+PG +G+                G  
Sbjct: 840 GAAGPSGGPGAPGPSGPQGGKGERGSPGPAGQAGFPGARGLPGPPGNNGNPGQPGNAGPA 899

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGI- 231
           GK GP G  G  G +G  G  G  GEPG+ G  G +G  G PG        G PG+ GI 
Sbjct: 900 GKDGPPGPAGSTGPVGSPGAAGPKGEPGVPGEKGPSGARGEPGSPGPSGILGPPGQRGIV 959

Query: 232 --PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG  G  G  G++GPRG  GK G NG PG
Sbjct: 960 GLPGMRGLPGPSGLSGPRGEDGKPGSNGSPG 990



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 41/91 (45%), Gaps = 18/91 (19%)

Query: 196 DGRDGLPGEPGLDGIP------GRNGMDGIP---------GKDGLPGKDGIPGTNGTN-- 238
           DG  G PG PG  G+P      G +GM G+P         G+DG  G  G PG  G N  
Sbjct: 230 DGESGRPGRPGERGLPGPPGHKGPSGMPGLPGMKGHRGFDGRDGAKGDSGAPGLKGENGL 289

Query: 239 -GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            GE G  GP G RG+ G  G  G P     +
Sbjct: 290 PGENGSPGPMGPRGQPGERGRAGLPGTAGAR 320


>gi|119569207|gb|EAW48822.1| collagen, type IX, alpha 1, isoform CRA_a [Homo sapiens]
          Length = 477

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/155 (47%), Positives = 92/155 (59%), Gaps = 21/155 (13%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGP 171
           +G  G +G  G+ G++GEKGA G+ G PGPQG+PG   D+G+RGP      KGD G  G 
Sbjct: 21  QGAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGA 80

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGL 225
           +GIPG  G   PKGD G P   G+DGRDG+PG PG  G PG+       G+ G+PG  G+
Sbjct: 81  RGIPGLPG---PKGDTGLP---GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGI 134

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G+ G  G+ G  G  G  GN GK G  G PG
Sbjct: 135 PGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPG 169



 Score = 46.6 bits (109), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA    G+MG  G+ G++G PG VGP GPQG+PG  G+ GP G  G 
Sbjct: 135 PGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGL 194

Query: 169 PG 170
           PG
Sbjct: 195 PG 196



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GPQ
Sbjct: 124 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 177

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PG+
Sbjct: 178 GLPGSRGELGPVGSPGLPGK 197



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G      +  PPG  GP G +G  GA+G  G+ G +G+ G PGV G  G  G+PG +
Sbjct: 52  GLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 111

Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+ G        G  G PG  GIPG +G  G KG  G PG+ G  G  G PG+ G  G  
Sbjct: 112 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEV 171

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG 236
           G  G  G+PG  G  G  G PG  G
Sbjct: 172 GPRGPQGLPGSRGELGPVGSPGLPG 196


>gi|410046784|ref|XP_003952258.1| PREDICTED: collagen alpha-1(II) chain [Pan troglodytes]
          Length = 1443

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 771 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 830

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 831 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 890

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 891 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 941

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 942 PGQRGERGFPGLPG 955



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 403 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 462

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 463 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 522

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 523 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 582

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 583 GLRGLPG 589



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 757 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 816

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 817 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 876

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 877 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 936

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 937 GIVGLPG 943



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 331 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 390

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 391 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 450

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 451 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 507

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 508 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 536



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 644 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 703

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 704 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 763

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 764 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 814

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 815 DAGAPGPQGPSGAPG 829



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 706 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 759

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 760 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 816

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 817 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 859



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 670 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 719

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 720 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 777

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 778 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 832



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 478 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 537

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 538 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 594

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 595 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 654

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 655 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 690



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 81/178 (45%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 883  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 935

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 936  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 993

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG  G  G  GE                   G TG +G+RG++G  G
Sbjct: 994  GSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1051



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 807  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 866

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 867  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 926

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 927  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 986

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 987  AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1017



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 330 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 383

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 384 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 443

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 444 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 503

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 504 PGRPGEPGLPGAR 516



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 643 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 702

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 703 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 762

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 763 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 810



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 89/226 (39%), Gaps = 84/226 (37%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------------------------ERGEKGAPGVV 145
           G  GP G  GE G  GE G+ G                           ERGE+GA    
Sbjct: 559 GFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGA---- 614

Query: 146 GPPGP---------------------QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKR 181
             PGP                     QG+PG+ G     GP+G+ G+PG +G PG +G +
Sbjct: 615 --PGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 672

Query: 182 GPKGDMGYPGRIGLDGR---------------DGLPGEPGLDGIPGRNGMD---GIPGKD 223
           GP+G  G PG  G  G                 G+PGE G  GI G  G     G  G +
Sbjct: 673 GPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 732

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 733 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 778



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 240 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 299

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 300 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 359

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 360 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 416

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 417 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 447



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 173 GIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG  G+RGP   +G  G+PG  GL G  G  G PGLDG  G  G  G+ G+ G PG++
Sbjct: 214 GKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN 273

Query: 230 GIPGTNGTNG 239
           G PG  G  G
Sbjct: 274 GSPGPMGPRG 283



 Score = 39.3 bits (90), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 77/188 (40%), Gaps = 48/188 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G +GP G +G  G +G +G+ G+RGE+G PG+   PGP G PG               
Sbjct: 920  PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL---PGPSGEPGK-------------- 962

Query: 171  PQGIPG---------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------ 215
             QG PG           G  G  G  G PGR G  G DG PG  G  G+ G  G      
Sbjct: 963  -QGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVG 1021

Query: 216  ---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                             G  G  G  G  G  G +G  G +G+ GP+G RG  G  G PG
Sbjct: 1022 APGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPG 1081

Query: 261  TPAICAYK 268
               +  ++
Sbjct: 1082 ERGLKGHR 1089


>gi|345797100|ref|XP_535998.3| PREDICTED: collagen alpha-2(V) chain [Canis lupus familiaris]
          Length = 1478

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 438 GPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 494

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 495 GSMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 551

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 552 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 601



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 91/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPG  G  G
Sbjct: 451 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGSMGERG 501

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 502 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 561

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
             G+ G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 562 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 618



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 83/188 (44%), Gaps = 48/188 (25%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------------------PGVVG 146
           E  PPG  G  G  G +G  G  G KG  G  G                      PG+ G
Sbjct: 385 ETGPPGPVGSQGLPGTVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRG 444

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGRIGLDGRDG 200
            PG  G+PG +G+ GPKG+   PGP GI      PG+EGKRGP+GD              
Sbjct: 445 QPGDPGVPGFKGEAGPKGE---PGPHGIQGPIGPPGEEGKRGPRGD-------------- 487

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               PG  G PG  G  G PG  G PG DG+PG  G  GE+G  G  G +G  G  G PG
Sbjct: 488 ----PGTVGPPGSMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPG 543

Query: 261 TPAICAYK 268
            P +   +
Sbjct: 544 EPGLPGAR 551



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 91/193 (47%), Gaps = 42/193 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP      
Sbjct: 275 PGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGP------ 328

Query: 169 PGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
              QG PG        GK GP G +G PG  G  G  G+ GE G  G  G  G  G  G+
Sbjct: 329 ---QGAPGQRGTHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGE 385

Query: 223 DGLP---GKDGIPGTNGTNGEKGMTGPRGN---------------------RGKSGINGV 258
            G P   G  G+PGT GT+G  G  GP G+                      G  GI G 
Sbjct: 386 TGPPGPVGSQGLPGTVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQ 445

Query: 259 PGTPAICAYKRES 271
           PG P +  +K E+
Sbjct: 446 PGDPGVPGFKGEA 458



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 726 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 785

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 786 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 844

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 845 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 892



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 557 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 616

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 617 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 676

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 677 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 736

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 737 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 769



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/169 (42%), Positives = 77/169 (45%), Gaps = 21/169 (12%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G  GE G  G  G  G+RG  G PG  GP GP GIPG  G  G  G  G  GP 
Sbjct: 312 GPMGPRGMPGERGRLGPQGAPGQRGTHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPT 371

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG----------- 221
           G  G EG +G +G+ G PG +   G  GLPG  G DG PG  G  G PG           
Sbjct: 372 GARGPEGPQGQRGETGPPGPV---GSQGLPGTVGTDGTPGAKGPTGSPGTSGPPGLAGPP 428

Query: 222 -------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                    G PG  G PG  G  G KG  GP+G  G  GI G  G P 
Sbjct: 429 GSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPG 477



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 80/155 (51%), Gaps = 18/155 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G +G  GA G  G+KG RG KG  G  G  G  G  G+ G  GP G MG  GP+
Sbjct: 258 GFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPMGPR 317

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G+PG+ G+ GP+G    PG+ G  G         + G PG  G  GIPG  G PG  G+ 
Sbjct: 318 GMPGERGRLGPQG---APGQRGTHG---------MPGKPGPMGPLGIPGSSGFPGNPGMK 365

Query: 233 GTNGTNGEKGMTGPRGNRGKS------GINGVPGT 261
           G  G  G +G  GP+G RG++      G  G+PGT
Sbjct: 366 GEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGT 400



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 75/151 (49%), Gaps = 12/151 (7%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G        G +
Sbjct: 246 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVG------ATGSK 299

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDGIP 232
           G+ GP G MG  G +G  G  G  G  G  G PG+ G  G+PGK G      +PG  G P
Sbjct: 300 GEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQRGTHGMPGKPGPMGPLGIPGSSGFP 359

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  GE G TG RG  G  G  G  G P 
Sbjct: 360 GNPGMKGEAGPTGARGPEGPQGQRGETGPPG 390



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+      EGK GP G  
Sbjct: 513 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 572

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    G PGKDG
Sbjct: 573 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 627



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 680 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 739

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 740 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 799

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 800 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 846



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 71/150 (47%), Gaps = 2/150 (1%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G  G  G  G+PG  G+PG +G RG KG  G  G +G  G  G  G  G 
Sbjct: 248 PGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGP 307

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G  G  G  G+PG+ G  G  G PG  GT+G  G  GP G  G  G +G PG P +   
Sbjct: 308 MGAMGPMGPRGMPGERGRLGPQGAPGQRGTHGMPGKPGPMGPLGIPGSSGFPGNPGMKGE 367

Query: 268 KRESCSLLPNSETSQL--LIPPTIVGSEHI 295
              + +  P     Q     PP  VGS+ +
Sbjct: 368 AGPTGARGPEGPQGQRGETGPPGPVGSQGL 397



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 21/117 (17%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------G 173
           +KGE G +               G+VGPPG +G PG  G+ GP G +G+ GPQ      G
Sbjct: 793 EKGEPGPR---------------GLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPG 837

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           + G+ G+ G KGD G PG  GL G  G  G  G+ G+ G  G  G PG  G PG  G
Sbjct: 838 VKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAG 894



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 805 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 864

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIGLD---------------GRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 865 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPPGAPGPAGPLGEPGKEGPPGLRG 924

Query: 210 IPGRNG 215
            PG +G
Sbjct: 925 DPGSHG 930



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 89/213 (41%), Gaps = 72/213 (33%)

Query: 111  PPGLQGPIGQKGEI------------------------------------GAKGEMGVKG 134
            PPGL+G  G  G +                                    G +G +G+ G
Sbjct: 919  PPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPG 978

Query: 135  ERGEKGAPGVVGPPGPQGIPGDEGKRGP------------------KGDMGYPGPQ---- 172
            +RGE+G PG+   PGP G P   GK GP                   G +G PGP+    
Sbjct: 979  QRGERGMPGL---PGPAGTP---GKVGPTGAPGDKGPPGPVGPPGSNGPVGEPGPEGPAG 1032

Query: 173  --GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL--P-- 226
              G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G PG  G   P  
Sbjct: 1033 NDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPVGPPG 1092

Query: 227  --GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GK G+ G  G  G+KG  G RG+RG+ G  G
Sbjct: 1093 RIGKRGLLGPQGPRGDKGDHGDRGDRGQKGHRG 1125



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 49/90 (54%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1037 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPVGPPGRIGK 1096

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+ G +G RG KGD G  G  G  G  G 
Sbjct: 1097 RGLLGPQGPRGDKGDHGDRGDRGQKGHRGF 1126


>gi|410908793|ref|XP_003967875.1| PREDICTED: collagen alpha-1(XI) chain-like isoform 1 [Takifugu
           rubripes]
          Length = 1806

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/141 (44%), Positives = 79/141 (56%), Gaps = 12/141 (8%)

Query: 129 EMGVKGERGEKGAPGVVGPP------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           E G +G  G  G PG  GPP      GP G  G +G+ GP+G +GYPGP+G+ G +G RG
Sbjct: 716 EKGPQGRSGLLGLPGADGPPGHPGKEGPAGEKGAQGQSGPQGPIGYPGPRGVKGADGVRG 775

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            KG     G  G DG  G  G+ GL G  G +GM G  G+D   G +G  G +G NGE G
Sbjct: 776 LKGSK---GEKGEDGFPGFKGDMGLKGDRGESGMLGSRGED---GPEGPKGRSGPNGESG 829

Query: 243 MTGPRGNRGKSGINGVPGTPA 263
             GP G +GK G+ G+PG P 
Sbjct: 830 PIGPAGEKGKLGVPGLPGYPG 850



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/129 (44%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           RG  G  G+ G  GP G+PG  G +G  GD   PGPQG  G +G  GP G  G  GR G 
Sbjct: 531 RGPSGPMGLTGRSGPVGMPGPAGLKGESGD---PGPQGPRGVQGPLGPPGKSGKRGRPGA 587

Query: 196 DGRDGLPGEPG------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           DG  G+PGE G       DG+PG  G  G  G+ G  G  G  G +G  GE G  GPRG 
Sbjct: 588 DGARGMPGESGSKGDRGFDGLPGLPGEKGHRGEPGPIGPTGAVGEDGQRGEDGEIGPRGL 647

Query: 250 RGKSGINGV 258
            G+SG  G+
Sbjct: 648 PGESGPRGL 656



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 85/179 (47%), Gaps = 18/179 (10%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              +G    +    P G  GP G KG  G +G  G KGE+GE G PG  G  G +G  G+
Sbjct: 744 AGEKGAQGQSGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGE 803

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G +G+ G  GP+G  G  G+ GP G  G  G++G+    GLPG PG  G  G  G 
Sbjct: 804 SGMLGSRGEDGPEGPKGRSGPNGESGPIGPAGEKGKLGV---PGLPGYPGRQGPKGSRGF 860

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMT---------------GPRGNRGKSGINGVPG 260
            G PG +G  G  G+ G  G  G++G T               GP+G  G  G +G PG
Sbjct: 861 PGFPGANGEKGARGVAGKAGPRGQRGPTGPRGGRGARGPTGKPGPKGTSGSDGPSGPPG 919



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 66/116 (56%), Gaps = 9/116 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRG------PK 163
           G  GP+G  G  G KGE G  G +G +G  G +GPPG    +G PG +G RG       K
Sbjct: 541 GRSGPVGMPGPAGLKGESGDPGPQGPRGVQGPLGPPGKSGKRGRPGADGARGMPGESGSK 600

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           GD G+ G  G+PG++G RG  G +G  G +G DG+ G  GE G  G+PG +G  G+
Sbjct: 601 GDRGFDGLPGLPGEKGHRGEPGPIGPTGAVGEDGQRGEDGEIGPRGLPGESGPRGL 656



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 85/154 (55%), Gaps = 15/154 (9%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGP---- 162
           GL+G  G+KGE    G KG+MG+KG+RGE G   + G  GP GP+G  G  G+ GP    
Sbjct: 775 GLKGSKGEKGEDGFPGFKGDMGLKGDRGESGMLGSRGEDGPEGPKGRSGPNGESGPIGPA 834

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
             KG +G PG   +PG  G++GPKG  G+PG  G +G  G  G  G  G  G+ G  G  
Sbjct: 835 GEKGKLGVPG---LPGYPGRQGPKGSRGFPGFPGANGEKGARGVAGKAGPRGQRGPTGPR 891

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G  G  G PG  GT+G  G +GP G RG  G
Sbjct: 892 GGRGARGPTGKPGPKGTSGSDGPSGPPGERGPQG 925



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 112/295 (37%), Gaps = 108/295 (36%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG------------EMGVKGERG------- 137
             ++G         P G+QGP+G  G+ G +G            E G KG+RG       
Sbjct: 552 AGLKGESGDPGPQGPRGVQGPLGPPGKSGKRGRPGADGARGMPGESGSKGDRGFDGLPGL 611

Query: 138 --EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------------- 182
             EKG  G  GP GP G  G++G+RG  G++G   P+G+PG+ G RG             
Sbjct: 612 PGEKGHRGEPGPIGPTGAVGEDGQRGEDGEIG---PRGLPGESGPRGLLGPRGPPGSPGA 668

Query: 183 -----------PKGDM------------------------------------GYPGRIGL 195
                      PKG+M                                    G  G +GL
Sbjct: 669 PGVAGVDGPQGPKGNMGPQGEPGPPGQQGIPGTQGLPGPQGPIGPPGEKGPQGRSGLLGL 728

Query: 196 DGRDGLPGEPGLDGIPGRNGMD---------GIPGKDGLPGKDGIPGTNGTNGEKGM--- 243
            G DG PG PG +G  G  G           G PG  G+ G DG+ G  G+ GEKG    
Sbjct: 729 PGADGPPGHPGKEGPAGEKGAQGQSGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGF 788

Query: 244 ------TGPRGNRGKSGI------NGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
                  G +G+RG+SG+      +G  G         ES  + P  E  +L +P
Sbjct: 789 PGFKGDMGLKGDRGESGMLGSRGEDGPEGPKGRSGPNGESGPIGPAGEKGKLGVP 843



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 72/177 (40%), Gaps = 63/177 (35%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDE 178
            G  G +GE G KGE G +G PG  GP GPQG+    GK GP+G  G PGP   QG+PG  
Sbjct: 1372 GAEGRQGEKGAKGESGTEGPPGKTGPVGPQGL---AGKPGPEGLRGIPGPVGEQGLPGSS 1428

Query: 179  GKR------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+                   G KG+ G+PG IGL G  G  GE G              
Sbjct: 1429 GQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKG-------------- 1474

Query: 221  GKDGLPGKDGIPGTNGTNG------------------------EKGMTGPRGNRGKS 253
               GLPG  G PG  G  G                         KG TGP G +G S
Sbjct: 1475 -DRGLPGPQGTPGNKGDGGVSGAAGPLGPPGPPGLPGPQGPKGAKGSTGPAGAKGDS 1530



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 71/158 (44%), Gaps = 21/158 (13%)

Query: 146 GPPGPQGIPGDEGKRGPKGDM-------GYPGPQG--IPGDEGK------------RGPK 184
           GPPG  G+PG +G  GP G M       G  G +G  +   E +            RGP 
Sbjct: 475 GPPGRAGLPGADGVPGPPGTMLMLPFRFGGDGEKGPVVSAQEAQAQAILSQARLAMRGPS 534

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G MG  GR G  G  G  G  G  G PG  G  G+ G  G PGK G  G  G +G +GM 
Sbjct: 535 GPMGLTGRSGPVGMPGPAGLKGESGDPGPQGPRGVQGPLGPPGKSGKRGRPGADGARGMP 594

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
           G  G++G  G +G+PG P    ++ E   + P     +
Sbjct: 595 GESGSKGDRGFDGLPGLPGEKGHRGEPGPIGPTGAVGE 632



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 55/109 (50%), Gaps = 18/109 (16%)

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---LDGIPGRNGMDGIPGKDG-- 224
            G +G  G++G +G  G  G PG+ G  G  GL G+PG   L GIPG  G  G+PG  G  
Sbjct: 1372 GAEGRQGEKGAKGESGTEGPPGKTGPVGPQGLAGKPGPEGLRGIPGPVGEQGLPGSSGQD 1431

Query: 225  ----------LPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPG 260
                      LPG  G PG+ G  G     G+ GP G +G+ G  G+PG
Sbjct: 1432 GPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPG 1480


>gi|198418418|ref|XP_002119477.1| PREDICTED: similar to Collagen alpha-2(IV) chain precursor
           (Canstatin) [Ciona intestinalis]
          Length = 1754

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 96/179 (53%), Gaps = 26/179 (14%)

Query: 111 PPGLQGPIGQKGEIGAKGE------------MGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
           PPG  G  G KG +G +GE             G KGE+G +G  G  GP G  G+PG +G
Sbjct: 272 PPGNNGSKGMKGNVGMQGEPGYPGFEGERGRFGEKGEKGVRGLAGGRGPTGAAGVPGYDG 331

Query: 159 KRGPKGDMGYPGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------G 206
           ++G +G  G  G  G P   G++G++GP G  G PG  GL G  G PG P         G
Sbjct: 332 RQGERGMPGRSGIDGAPGMKGEQGEQGPVGAAGLPGLQGLQGPIGSPGSPGNVGKPGTAG 391

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN--GEKGMTGPRGNRGKSGINGVPGTPA 263
             G PG NG DG PG+DGLPG+ G+PG  G    GEKG  G +G  GK G +GVPG P 
Sbjct: 392 PHGQPGINGFDGPPGEDGLPGQIGLPGNPGVPGVGEKGEPGQKGRNGKHGQDGVPGLPG 450



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 90/165 (54%), Gaps = 20/165 (12%)

Query: 101 GFCNSTK-EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           GFC S K    PPG QGP G +GEIG  G  GV G +G  G PG  G        G++G 
Sbjct: 51  GFCVSEKGRRGPPGAQGPTGLQGEIGFPGPEGVMGPKGYGGLPGRPG------KAGEKGD 104

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           RG  G  GY G  G+PG  G+ GP+G   YPG+   DG +G  G+ G  G PG NG+DG+
Sbjct: 105 RGTIGVPGYSGINGVPGHPGESGPRG---YPGK---DGCNGTMGDMGPAGPPGYNGLDGL 158

Query: 220 PGKDGLPGKDGIPG-------TNGTNGEKGMTGPRGNRGKSGING 257
           PG DG+ G  G P        T G  GE+G TGP+G  G+ G  G
Sbjct: 159 PGPDGMKGAKGEPAYVNVEDLTKGARGERGHTGPKGPSGRPGTTG 203



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 100/196 (51%), Gaps = 31/196 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------QGIPGDEGKRGPKGDM 166
            G+ G  G+ G  G +GE G KG RG  G PGVVG PGP       G+PG  G +G KG +
Sbjct: 1084 GIPGEYGRNGLPGVEGEKGAKGARGRIGLPGVVGRPGPIGETGRTGLPGPSGFKGQKGML 1143

Query: 167  GYPGPQGIPGDEG------KRGPK---GDMGYPGRIGLDGRDGLPGE------------P 205
            G  G  G+PG EG      + GPK   G  G PG  GLDG  G  GE            P
Sbjct: 1144 GEAGQPGLPGREGSPGLHGENGPKGMQGRRGLPGLSGLDGPSGQKGERGAIGQSGPKGYP 1203

Query: 206  GLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            GL G+ G  G+ G+ G+DGL   PG+DG PG +G +G  G  G +G  G S + G PG  
Sbjct: 1204 GLVGMKGGRGLPGLDGRDGLNGEPGEDGAPGFDGLDGRPGRRGEKGKPGVSNVAGPPGAT 1263

Query: 263  AICAYKRES-CSLLPN 277
             I   K E+  S LP 
Sbjct: 1264 GITGVKGETGLSGLPG 1279



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 92/176 (52%), Gaps = 27/176 (15%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGI------------PGDE 157
            GL G  G+ G  G  G  G  G RGEKG PGV    GPPG  GI            PG+ 
Sbjct: 1222 GLNGEPGEDGAPGFDGLDGRPGRRGEKGKPGVSNVAGPPGATGITGVKGETGLSGLPGES 1281

Query: 158  GKRGPKGDMGYPGPQGI---PGDEGKRG------PKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  G KG  G PGP G    PG  G++G      PKG+ G PG +G+ GR GLPG+ G +
Sbjct: 1282 GPIGLKGKRGNPGPAGFSGRPGPVGEQGLPGFPGPKGEPGLPGGVGIPGRQGLPGKDGQE 1341

Query: 209  GIPGRNGMDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G+ GI G  GLPG+   DG+PG  G  G  G+ G  G  G+ G  G+PG+
Sbjct: 1342 GFTGHQGLPGIKGMPGLPGQNGLDGVPGIQGDTGPAGLVGLTGPSGQKGSVGLPGS 1397



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 97/204 (47%), Gaps = 46/204 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------ 159
           PG+ G  GQ G  G +G  G KGE G +G PG+ G  G QG+ G EG+            
Sbjct: 634 PGIAGIPGQDGRSGRRGAHGEKGEVGPQGLPGLPGLKGFQGLKGREGRAGQDAFGLPGQI 693

Query: 160 --RGPKGDMGYPGPQGIPGDEGK----------RGPKGDMGYPGRIGL------------ 195
             +G KGD G+ GPQG PG +G+          +G KG+ G PGR+G             
Sbjct: 694 GFKGEKGDEGFTGPQGFPGSKGEPGESLGGVAPKGEKGETGSPGRVGFPGLKGTKGEQGK 753

Query: 196 ---------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                    DG  G  GEPGL G+PG  G+ G  G+ GLPG  G+ G  G  G +G  G 
Sbjct: 754 TGVEGVTGDDGERGDTGEPGLPGVPGEQGLRGPQGESGLPGVPGLSGERGVTGIRGGNGM 813

Query: 247 RGNRGKSGINGVPGTPAICAYKRE 270
           +G +GK G++  PG       K E
Sbjct: 814 KGEKGKDGVS-YPGPAGPAGQKGE 836



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 99/189 (52%), Gaps = 30/189 (15%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM------GVKGERGEKGAPGVVGPPG 149
            L  + G      +   PG QG  G +G  G KG +       V+G+ GEKG  G VG PG
Sbjct: 998  LPGLDGMSGLYGKKGAPGKQGATGPQGFKGEKGSLPPGGLVDVRGQTGEKGDTGPVGEPG 1057

Query: 150  PQGIPGDEGKRGPKGDMGYPGP---QGIPGD---------EGKRGPKGD---------MG 188
             QG+PG +G +G +G+ G  G     GIPG+         EG++G KG          +G
Sbjct: 1058 QQGLPGPDGPKGNRGNQGIKGSTGVSGIPGEYGRNGLPGVEGEKGAKGARGRIGLPGVVG 1117

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             PG IG  GR GLPG  G     G+ GM G  G+ GLPG++G PG +G NG KGM G RG
Sbjct: 1118 RPGPIGETGRTGLPGPSGFK---GQKGMLGEAGQPGLPGREGSPGLHGENGPKGMQGRRG 1174

Query: 249  NRGKSGING 257
              G SG++G
Sbjct: 1175 LPGLSGLDG 1183



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 87/166 (52%), Gaps = 15/166 (9%)

Query: 111  PPGLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
            PPG  G  G KGE G        G +G+KG+RG  G  G  G PGP G  G  G  GPKG
Sbjct: 1259 PPGATGITGVKGETGLSGLPGESGPIGLKGKRGNPGPAGFSGRPGPVGEQGLPGFPGPKG 1318

Query: 165  DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            + G PG  GIPG +G  G  G  G+       G  GLPG  G+ G+PG+NG+DG+PG  G
Sbjct: 1319 EPGLPGGVGIPGRQGLPGKDGQEGF------TGHQGLPGIKGMPGLPGQNGLDGVPGIQG 1372

Query: 225  LPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAICAY 267
              G  G+ G  G +G+K   G+ G  G  G  G+ G PG P    +
Sbjct: 1373 DTGPAGLVGLTGPSGQKGSVGLPGSHGFSGDKGVRGFPGNPGRPGF 1418



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 104/230 (45%), Gaps = 36/230 (15%)

Query: 37  RRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWV--WLNAYSRI 94
           RR    +KG++    +P  P ++      ++ ++ RE          P    +       
Sbjct: 648 RRGAHGEKGEVGPQGLPGLPGLKG-----FQGLKGREGRAGQDAFGLPGQIGFKGEKGDE 702

Query: 95  PLVAMQGFCNSTKE-------YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
                QGF  S  E         P G +G  G  G +G  G  G KGE+G+ G  GV   
Sbjct: 703 GFTGPQGFPGSKGEPGESLGGVAPKGEKGETGSPGRVGFPGLKGTKGEQGKTGVEGVT-- 760

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                  GD+G+R   GD G PG  G+PG++G RGP+G+ G PG  GL       GE G+
Sbjct: 761 -------GDDGER---GDTGEPGLPGVPGEQGLRGPQGESGLPGVPGLS------GERGV 804

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            GI G NGM G  GKDG+      PG  G  G+KG  G  G +G+SG  G
Sbjct: 805 TGIRGGNGMKGEKGKDGVS----YPGPAGPAGQKGEVGEPGAKGESGSQG 850



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 107/230 (46%), Gaps = 45/230 (19%)

Query: 87  WLNAYSRIPLVAMQ----GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG--------VKG 134
            L   S +P ++ Q    G    + E  P G  G  G+ GEIG  G+ G        VKG
Sbjct: 561 GLPGLSGLPGISGQLGEPGEPGESGENGPRGFDGQKGRTGEIGPPGQKGEPATLVGDVKG 620

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGYPGPQGIPGDEGKRGPKG------ 185
           E GE G PG  G PG  GIPG +G+   RG  G+ G  GPQG+PG  G +G +G      
Sbjct: 621 EPGEPGLPGGQGEPGIAGIPGQDGRSGRRGAHGEKGEVGPQGLPGLPGLKGFQGLKGREG 680

Query: 186 -----DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-----MDGIP-----GKDGLPGKDG 230
                  G PG+IG  G  G  G  G  G PG  G     + G+      G+ G PG+ G
Sbjct: 681 RAGQDAFGLPGQIGFKGEKGDEGFTGPQGFPGSKGEPGESLGGVAPKGEKGETGSPGRVG 740

Query: 231 IPGTNGTNGEKGMTG---------PRGNRGKSGINGVPGTPAICAYKRES 271
            PG  GT GE+G TG          RG+ G+ G+ GVPG   +   + ES
Sbjct: 741 FPGLKGTKGEQGKTGVEGVTGDDGERGDTGEPGLPGVPGEQGLRGPQGES 790



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 87/166 (52%), Gaps = 17/166 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G+ G +G +G  G  G +GE G PG VG PG QG+PG +G+ G  G  G PG 
Sbjct: 1293 PGPAGFSGRPGPVGEQGLPGFPGPKGEPGLPGGVGIPGRQGLPGKDGQEGFTGHQGLPGI 1352

Query: 172  QGIPGDEGKRG----P--KGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGK 222
            +G+PG  G+ G    P  +GD G  G +GL G  G  G    PG  G  G  G+ G PG 
Sbjct: 1353 KGMPGLPGQNGLDGVPGIQGDTGPAGLVGLTGPSGQKGSVGLPGSHGFSGDKGVRGFPGN 1412

Query: 223  DGLPGKDGIPGTNGTNGEKG--------MTGPRGNRGKSGINGVPG 260
             G PG  G+ G  G  GE G        + GP+GN GK G+ G PG
Sbjct: 1413 PGRPGFPGLVGEPGFKGEPGRSIEPTDLVAGPKGNTGKPGLPGSPG 1458



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 92/196 (46%), Gaps = 54/196 (27%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------------ 154
            GL GP GQKGE GA G+ G       KG PG+VG  G +G+P                  
Sbjct: 1180 GLDGPSGQKGERGAIGQSG------PKGYPGLVGMKGGRGLPGLDGRDGLNGEPGEDGAP 1233

Query: 155  ------GDEGKRGPKGD------MGYPGPQGI------------PGD------EGKRGPK 184
                  G  G+RG KG        G PG  GI            PG+      +GKRG  
Sbjct: 1234 GFDGLDGRPGRRGEKGKPGVSNVAGPPGATGITGVKGETGLSGLPGESGPIGLKGKRGNP 1293

Query: 185  GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G+ GR G  G  GLPG PG  G PG  G  GIPG+ GLPGKDG  G  G  G  G+ 
Sbjct: 1294 GPAGFSGRPGPVGEQGLPGFPGPKGEPGLPGGVGIPGRQGLPGKDGQEGFTGHQGLPGIK 1353

Query: 245  GPRGNRGKSGINGVPG 260
            G  G  G++G++GVPG
Sbjct: 1354 GMPGLPGQNGLDGVPG 1369



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 91/195 (46%), Gaps = 32/195 (16%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +G  G +G  G KG  G+ G+ G  G PG+ G  GP G+ G  G  G KG +G PG  
Sbjct: 1339 GQEGFTGHQGLPGIKGMPGLPGQNGLDGVPGIQGDTGPAGLVGLTGPSGQKGSVGLPGSH 1398

Query: 173  GIPGDEGKRGPKGDMGYPGRIGL--------------------------DGRDGLPGEPG 206
            G  GD+G RG  G+ G PG  GL                           G+ GLPG PG
Sbjct: 1399 GFSGDKGVRGFPGNPGRPGFPGLVGEPGFKGEPGRSIEPTDLVAGPKGNTGKPGLPGSPG 1458

Query: 207  L---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPG 260
            L    G+PG  G  G  G+ GL G+DGIPG++G  G    +G  GP+G+ G+ G  G  G
Sbjct: 1459 LIGRTGLPGLQGFKGDQGERGLDGRDGIPGSHGQRGNPGPRGFIGPKGSPGRDGTPGRSG 1518

Query: 261  TPAICAYKRESCSLL 275
                    R    L+
Sbjct: 1519 VAGPAGRVRPPGHLI 1533



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 86/167 (51%), Gaps = 15/167 (8%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------KR 160
            G  GP G  G  G  G  G+ G  G+KGAPG  G  GPQG  G++G            + 
Sbjct: 985  GRTGPKGSDGIDGLPGLDGMSGLYGKKGAPGKQGATGPQGFKGEKGSLPPGGLVDVRGQT 1044

Query: 161  GPKGD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G KGD   +G PG QG+PG +G +G +G+ G  G  G+ G  G  G  GL G+ G  G  
Sbjct: 1045 GEKGDTGPVGEPGQQGLPGPDGPKGNRGNQGIKGSTGVSGIPGEYGRNGLPGVEGEKGAK 1104

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G+ GLPG  G PG  G  G  G+ GP G +G+ G+ G  G P +
Sbjct: 1105 GARGRIGLPGVVGRPGPIGETGRTGLPGPSGFKGQKGMLGEAGQPGL 1151



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 79/152 (51%), Gaps = 33/152 (21%)

Query: 112  PGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PGL G   P G +G  G  G  G+ G  G+KG  G +G  GP+               GY
Sbjct: 1158 PGLHGENGPKGMQGRRGLPGLSGLDGPSGQKGERGAIGQSGPK---------------GY 1202

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG  G+         KG  G P   GLDGRDGL GEPG DG PG +G+DG PG+ G  GK
Sbjct: 1203 PGLVGM---------KGGRGLP---GLDGRDGLNGEPGEDGAPGFDGLDGRPGRRGEKGK 1250

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               PG +   G  G TG  G +G++G++G+PG
Sbjct: 1251 ---PGVSNVAGPPGATGITGVKGETGLSGLPG 1279



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 88/182 (48%), Gaps = 9/182 (4%)

Query: 88   LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
            +    R  L    GF          G  G  G++G  G  GE G KG +G +G PG+ G 
Sbjct: 1122 IGETGRTGLPGPSGFKGQKGMLGEAGQPGLPGREGSPGLHGENGPKGMQGRRGLPGLSGL 1181

Query: 148  PGPQGIPGDEGKRGPKGDMGYPG------PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
             GP G  G+ G  G  G  GYPG       +G+PG +G+ G  G+ G  G  G DG DG 
Sbjct: 1182 DGPSGQKGERGAIGQSGPKGYPGLVGMKGGRGLPGLDGRDGLNGEPGEDGAPGFDGLDGR 1241

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGV 258
            PG  G  G PG + + G PG  G+ G  G  G +G  GE    G+ G RGN G +G +G 
Sbjct: 1242 PGRRGEKGKPGVSNVAGPPGATGITGVKGETGLSGLPGESGPIGLKGKRGNPGPAGFSGR 1301

Query: 259  PG 260
            PG
Sbjct: 1302 PG 1303



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 77/161 (47%), Gaps = 30/161 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGV------------KGERGEKGAPGVVGPPGPQGIPGDEGK 159
            PGL+G  G+ G  G KGE  +             G  G  G PG+ G  GP G+P     
Sbjct: 870  PGLEGLPGKDGSPGEKGESALVGRRGPPGPEGPSGVTGPPGKPGIKGNRGPPGLPSSGKL 929

Query: 160  RGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLD---------------GRDGL 201
            RGPKG +G+    G  G+ GD+G  G  G+ G PG  G D               GR G 
Sbjct: 930  RGPKGSIGFAGRDGETGLKGDKGSTGLPGETGKPGPAGADGLPGTPGPPGPRGANGRTGP 989

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             G  G+DG+PG +GM G+ GK G PGK G  G  G  GEKG
Sbjct: 990  KGSDGIDGLPGLDGMSGLYGKKGAPGKQGATGPQGFKGEKG 1030



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 90/195 (46%), Gaps = 35/195 (17%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGE------------KGAPGVVGPPGPQGIP---- 154
           PPG  G  G  G  G  G++G  GE GE            KG  G +GPPG +G P    
Sbjct: 556 PPGQNGLPGLSGLPGISGQLGEPGEPGESGENGPRGFDGQKGRTGEIGPPGQKGEPATLV 615

Query: 155 ----GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
               G+ G+ G  G  G PG  GIPG +G+ G +G  G  G +G  G  GLPG  G  G+
Sbjct: 616 GDVKGEPGEPGLPGGQGEPGIAGIPGQDGRSGRRGAHGEKGEVGPQGLPGLPGLKGFQGL 675

Query: 211 PGRNGMD-----GIPGK---------DGLPGKDGIPGTNGTNGEK-GMTGPRGNRGKSGI 255
            GR G       G+PG+         +G  G  G PG+ G  GE  G   P+G +G++G 
Sbjct: 676 KGREGRAGQDAFGLPGQIGFKGEKGDEGFTGPQGFPGSKGEPGESLGGVAPKGEKGETGS 735

Query: 256 NGVPGTPAICAYKRE 270
            G  G P +   K E
Sbjct: 736 PGRVGFPGLKGTKGE 750



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 78/158 (49%), Gaps = 25/158 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG------------EKGAPGVVGPPGPQGIP--GDEG 158
           GLQGPIG  G  G  G+ G  G  G            E G PG +G PG  G+P  G++G
Sbjct: 370 GLQGPIGSPGSPGNVGKPGTAGPHGQPGINGFDGPPGEDGLPGQIGLPGNPGVPGVGEKG 429

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI--GLDGRDGLPGEPGLDGIPGRNGM 216
           + G KG  G  G  G+PG  G+ GP+G  G  G    GL+GRDG PG  G  G PG  G+
Sbjct: 430 EPGQKGRNGKHGQDGVPGLPGEEGPRGFPGISGESIPGLNGRDGPPGLRGEPGQPGARGV 489

Query: 217 DGIPGK---------DGLPGKDGIPGTNGTNGEKGMTG 245
            G PG+          G  G  GIPG  G  G KG+ G
Sbjct: 490 AGAPGQIITPDGDHMVGPQGPTGIPGVRGLKGLKGVAG 527



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 110/272 (40%), Gaps = 67/272 (24%)

Query: 51  SVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYC 110
            +P  P V  V      E  E  ++ +N  H    V        P    +GF   + E  
Sbjct: 415 GLPGNPGVPGV-----GEKGEPGQKGRNGKHGQDGVPGLPGEEGP----RGFPGISGESI 465

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------VVGPPGPQGIPG------ 155
           P GL G   + G  G +GE G  G RG  GAPG         +VGP GP GIPG      
Sbjct: 466 P-GLNG---RDGPPGLRGEPGQPGARGVAGAPGQIITPDGDHMVGPQGPTGIPGVRGLKG 521

Query: 156 ----------------------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
                                       ++G  GP G  G PG  G+PG  G+ G  G+ 
Sbjct: 522 LKGVAGRDGGPGEKGEKGGECACQDAVGEKGSPGPPGQNGLPGLSGLPGISGQLGEPGEP 581

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNG--------MDGIPGKDGLPGKDGIPGTNGTNG 239
           G  G  G  G DG  G  G  G PG+ G        + G PG+ GLPG  G PG  G  G
Sbjct: 582 GESGENGPRGFDGQKGRTGEIGPPGQKGEPATLVGDVKGEPGEPGLPGGQGEPGIAGIPG 641

Query: 240 EKGMTGPR---GNRGKSGINGVPGTPAICAYK 268
           + G +G R   G +G+ G  G+PG P +  ++
Sbjct: 642 QDGRSGRRGAHGEKGEVGPQGLPGLPGLKGFQ 673



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 90/180 (50%), Gaps = 25/180 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPG---PQGIPGDEGKRGPKGD 165
           PG++G  G++G +GA G  G++G +G     G+PG VG PG   P G PG  G  GP G+
Sbjct: 348 PGMKGEQGEQGPVGAAGLPGLQGLQGPIGSPGSPGNVGKPGTAGPHGQPGINGFDGPPGE 407

Query: 166 MGYPGPQGIPGDEG-----KRGPKGDMGYPGRIGLDGRDGLPGE--------------PG 206
            G PG  G+PG+ G     ++G  G  G  G+ G DG  GLPGE              PG
Sbjct: 408 DGLPGQIGLPGNPGVPGVGEKGEPGQKGRNGKHGQDGVPGLPGEEGPRGFPGISGESIPG 467

Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           L+G  G  G+ G PG+ G  G  G PG   T     M GP+G  G  G+ G+ G   +  
Sbjct: 468 LNGRDGPPGLRGEPGQPGARGVAGAPGQIITPDGDHMVGPQGPTGIPGVRGLKGLKGVAG 527



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 83/171 (48%), Gaps = 27/171 (15%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGDEGKRG 161
            L+GP G  G  G  GE G+KG++G  G PG  G PGP G              G  G+ G
Sbjct: 929  LRGPKGSIGFAGRDGETGLKGDKGSTGLPGETGKPGPAGADGLPGTPGPPGPRGANGRTG 988

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------LDGIPGRNG 215
            PKG  G     G+PG +G  G  G  G PG+ G  G  G  GE G      L  + G+ G
Sbjct: 989  PKGSDGI---DGLPGLDGMSGLYGKKGAPGKQGATGPQGFKGEKGSLPPGGLVDVRGQTG 1045

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI------NGVPG 260
              G  G  G PG+ G+PG +G  G +G  G +G+ G SGI      NG+PG
Sbjct: 1046 EKGDTGPVGEPGQQGLPGPDGPKGNRGNQGIKGSTGVSGIPGEYGRNGLPG 1096


>gi|6978677|ref|NP_037061.1| collagen alpha-1(II) chain precursor [Rattus norvegicus]
 gi|83301579|sp|P05539.2|CO2A1_RAT RecName: Full=Collagen alpha-1(II) chain; AltName: Full=Alpha-1
           type II collagen; Contains: RecName: Full=Collagen
           alpha-1(II) chain; Contains: RecName:
           Full=Chondrocalcin; Flags: Precursor
 gi|1032389|gb|AAA79780.1| collagen alpha 1 type II [Rattus norvegicus]
          Length = 1419

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKG+ G  G++G+ GAPG  GP   PGP
Sbjct: 747 TGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGP 806

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP------------------------KGD 186
           QG  G  G +G +G  G PG  G PG  G+ GP                        +GD
Sbjct: 807 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPAGPPGPAGKDGPKGARGD 866

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          G+PGL G  G  G  G PG DG  G DG PG  G  G++G+ G 
Sbjct: 867 TGAPGRA---------GDPGLQGPAGAPGEKGEPGDDGPSGSDGPPGPQGLAGQRGIVGL 917

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 918 PGQRGERGFPGLPG 931



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 88/187 (47%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              GD+G+ G KGD 
Sbjct: 733 GEKGEVGPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDA 792

Query: 167 GYPGPQ---GIPGDE------------GKRGPKGDMGYP---GRIGLDG----------- 197
           G PGPQ   G PG +            G +GP G  G+P   GR+G  G           
Sbjct: 793 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPAGPP 852

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ 
Sbjct: 853 GPAGKDGPKGARGDTGAPGRAGDPGLQGPAGAPGEKGEPGDDGPSGSDGPPGPQGLAGQR 912

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 913 GIVGLPG 919



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 88/190 (46%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPK--------- 163
           GP+G KG+ G  G  G KGE+G KG     GP GPQG P   G+EGKRG +         
Sbjct: 379 GPLGPKGQTGEPGIAGFKGEQGPKG---ETGPAGPQGAPGPAGEEGKRGARGEPGGAGPI 435

Query: 164 ---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMD 217
              G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ 
Sbjct: 436 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLT 495

Query: 218 GIPG---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG                             G PG  G PG  G NGE G  G +G  
Sbjct: 496 GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLA 555

Query: 251 GKSGINGVPG 260
           G  G+ G+PG
Sbjct: 556 GAPGLRGLPG 565



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 90/215 (41%), Gaps = 75/215 (34%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------- 156
           G  G  G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG           
Sbjct: 301 GAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIA 360

Query: 157 -----------------------------------EGKRGPKGDMGYPGPQGIP---GDE 178
                                              +G++GPKG+ G  GPQG P   G+E
Sbjct: 361 GAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEE 420

Query: 179 GKRGPK------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GKRG +                  G+ G+PG+ GL G  G PGE G  G+ G  G +G P
Sbjct: 421 GKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDP 480

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+   PG+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 481 GR---PGEPGLPGARGLTGRPGDAGPQGKVGPSGA 512



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 85/190 (44%), Gaps = 48/190 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------------PQGI 153
           PG QGP G  G  GA+G  G  G  G  GA G VGPPG                  P+G 
Sbjct: 804 PGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPAGPPGPAGKDGPKGA 863

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDG---LPGEPGL 207
            GD G  G  GD G  GP G PG++G+    GP G  G PG  GL G+ G   LPG+ G 
Sbjct: 864 RGDTGAPGRAGDPGLQGPAGAPGEKGEPGDDGPSGSDGPPGPQGLAGQRGIVGLPGQRGE 923

Query: 208 DGIPGRNGMDGIPGKDGLPG------------------------KDGIPGTNGTNGEKGM 243
            G PG  G  G PGK G PG                        ++G PG +G  G  G 
Sbjct: 924 RGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGA 983

Query: 244 TGPRGNRGKS 253
            G +G+RG++
Sbjct: 984 AGVKGDRGET 993



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 620 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPG 679

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 680 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 739

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 740 PPGPSGSTGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKG 790

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 791 DAGAPGPQGPSGAPG 805



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 682 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 735

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 736 GEVGPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQK---GDA 792

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 793 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 835



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 646 GLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGP---------- 695

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 696 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGARGAP 753

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 754 GERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQG 808



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 73/163 (44%), Gaps = 27/163 (16%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG- 158
           QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG  G  G  G 
Sbjct: 783 QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 842

Query: 159 --------------KRGPK---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                         K GPK   GD G PG  G PG +G  G  G+ G PG  G  G DG 
Sbjct: 843 NGNPGPAGPPGPAGKDGPKGARGDTGAPGRAGDPGLQGPAGAPGEKGEPGDDGPSGSDGP 902

Query: 202 PGEPGLD------GIPGR---NGMDGIPGKDGLPGKDGIPGTN 235
           PG  GL       G+PG+    G  G+PG  G PGK G PG +
Sbjct: 903 PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGAS 945



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 86/188 (45%), Gaps = 36/188 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVGPPGP------Q 151
           G+ GP G +G++G KG  G  G+ G +G                 G VGPPGP      +
Sbjct: 691 GIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGAR 750

Query: 152 GIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G PG+ G+ GP G  G+ GP G        GD+G+ G KGD G PG  G  G  G  G  
Sbjct: 751 GAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPT 810

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---------GPRGNRGKSGIN 256
           G+ G  G  G  G PG  G PG  G  G  G+NG  G           GP+G RG +G  
Sbjct: 811 GVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPAGPPGPAGKDGPKGARGDTGAP 870

Query: 257 GVPGTPAI 264
           G  G P +
Sbjct: 871 GRAGDPGL 878



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 95/213 (44%), Gaps = 45/213 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P GL GP G  G+ G  GE G+ G RG  G PG  GP   QG  G  
Sbjct: 454 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGP---QGKVGPS 510

Query: 158 GK---------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG-- 200
           G                RG  G MG+PGP+G  G+ GK G KG  G PG  GL G+DG  
Sbjct: 511 GAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGET 570

Query: 201 ----------LPGEPGLDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTN 238
                       GE G  G PG +G  G+PG              G+PG+ G PG  G  
Sbjct: 571 GAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPR 630

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYK 268
           GE+G  G RG+ G  G+    G+PGTP     K
Sbjct: 631 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPK 663



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 79/198 (39%), Gaps = 57/198 (28%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  GAKGE G  G RG +GA G       +G PG+ G  GP G  G PG  GIPG +G  
Sbjct: 301 GAPGAKGEAGPTGARGPEGAQGS------RGEPGNPGSPGPAGASGNPGTDGIPGAKGSA 354

Query: 182 ---------------------------GPKGDMGYPGRIGLDGRDGLPGE---PGLDGIP 211
                                      GPKG  G PG  G  G  G  GE    G  G P
Sbjct: 355 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAP 414

Query: 212 GRNGMD---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G +                     G PG  G PG+DG+ G  G  GE+G +G  G +
Sbjct: 415 GPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPK 474

Query: 251 GKSGINGVPGTPAICAYK 268
           G +G  G PG P +   +
Sbjct: 475 GANGDPGRPGEPGLPGAR 492



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 619 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPP 678

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 679 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 738

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 739 GPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEA 786



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 83/208 (39%), Gaps = 69/208 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
            PGLQGP G  GE         KGE G+ G  G  GPPGPQG+ G  G      +RG +G 
Sbjct: 876  PGLQGPAGAPGE---------KGEPGDDGPSGSDGPPGPQGLAGQRGIVGLPGQRGERGF 926

Query: 166  MGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGI 210
             G PGP G PG +G  G  GD                G PGR G          PG DG 
Sbjct: 927  PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADGP 977

Query: 211  PGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTNGE 240
            PGR+G  G+                               G  G  G  G  G +G  G 
Sbjct: 978  PGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGA 1037

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1038 RGIAGPQGPRGDKGEAGEPGERGLKGHR 1065



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 90/226 (39%), Gaps = 84/226 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+             G +G+ 
Sbjct: 529 GQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQ 588

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QGIPG+ G  G   P+G+ G+PG        GL 
Sbjct: 589 GAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 648

Query: 197 GRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GKD 223
           G  GLPG PG D                     G+PG  G  GI             G +
Sbjct: 649 GPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 708

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 709 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGARGAPG 754



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 84/229 (36%), Gaps = 76/229 (33%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG---------EKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GP G +G  G  G  GVKG RG         E GAPGV G     G PG+ G  GP 
Sbjct: 199 GLPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGE---SGSPGENGSPGPM 255

Query: 164 GDMGYPGPQ------------------------------------GIPGDEGKRGPKGDM 187
           G  G PG +                                    G PG +G+ GP G  
Sbjct: 256 GPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFLGAPGAKGEAGPTGAR 315

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP--------------- 232
           G  G  G  G  G PG PG  G  G  G DGIPG  G  G  GI                
Sbjct: 316 GPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ 375

Query: 233 ------GTNGTNGE------KGMTGPRGNRGKSGINGVPGTPAICAYKR 269
                 G  G  GE      KG  GP+G  G +G  G PG PA    KR
Sbjct: 376 GATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPG-PAGEEGKR 423



 Score = 42.7 bits (99), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 82/206 (39%), Gaps = 60/206 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDE----------- 157
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP   +G+PG+            
Sbjct: 216 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 275

Query: 158 -------------------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
                                    G  G KG+ G  G +G  G +G RG  G+ G PG 
Sbjct: 276 RGNDGQPGPAGPPGPVGPAGGPGFLGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGP 335

Query: 193 IGLDGR---DGLPGEPGLDGIPG------------------RNGMDGIPGKDGLPGKDGI 231
            G  G    DG+PG  G  G PG                    G  G  G+ G PG  G 
Sbjct: 336 AGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGF 395

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  GE G  GP+G  G +G  G
Sbjct: 396 KGEQGPKGETGPAGPQGAPGPAGEEG 421



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 71/189 (37%), Gaps = 60/189 (31%)

Query: 133 KGERGEKGAPGVVGPP---------------GPQGIPGDEGKR---GPKGDMGYPGPQGI 174
           +G  GE G PGV GP                G  G PG  G+R   GP+G  G+PG  G+
Sbjct: 156 QGNPGEPGEPGVSGPIGPRGPPGPAGKPGDDGEAGKPGKAGERGLPGPQGARGFPGTPGL 215

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD----- 229
           PG +G R      GYPG  G  G  G PG  G  G PG NG  G  G  GLPG+      
Sbjct: 216 PGVKGHR------GYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGP 269

Query: 230 -------------------------------GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                                          G PG  G  G  G  GP G +G  G  G 
Sbjct: 270 AGAAGARGNDGQPGPAGPPGPVGPAGGPGFLGAPGAKGEAGPTGARGPEGAQGSRGEPGN 329

Query: 259 PGTPAICAY 267
           PG+P     
Sbjct: 330 PGSPGPAGA 338


>gi|301609671|ref|XP_002934400.1| PREDICTED: collagen alpha-1(XI) chain-like [Xenopus (Silurana)
            tropicalis]
          Length = 1640

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/191 (40%), Positives = 93/191 (48%), Gaps = 30/191 (15%)

Query: 111  PPGLQGPIG------QKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            P G+QGPIG      Q GE G +G+ G+   KG+ G +G PGV GP G QG+PG  G++G
Sbjct: 985  PIGIQGPIGHPGQAGQDGEPGKRGQQGMYGQKGDEGYRGFPGVAGPRGLQGMPGPPGEKG 1044

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
              G +G  GP G  G  G +GP G     G PG  G  G  G  GEPG  G PG+ G  G
Sbjct: 1045 ESGHVGLMGPPGSSGPRGPQGPSGGEGVHGMPGGTGQPGAVGEKGEPGESGDPGQTGEQG 1104

Query: 219  IPGKDG---------------LPGKDGIPGTNGTNGEKG---MTGPRGNRGKSGINGVPG 260
             PG  G                PGK G PG +G  G  G     G  G RG++GI GV G
Sbjct: 1105 PPGGKGDVGEKGESGPSGAAGAPGKKGRPGEDGPKGNMGPIGFPGDSGQRGEAGIPGVDG 1164

Query: 261  TPAICAYKRES 271
             P       ES
Sbjct: 1165 IPGEKGDAGES 1175



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 88/174 (50%), Gaps = 30/174 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE------------------RGEKGAPGVVGPPGPQ-- 151
           PG QGPIG  GE G  G  G  GE                  RG KGA GV GP G +  
Sbjct: 569 PGPQGPIGMPGEKGHPGREGPAGEKGIQGPPGAPGPIGYPGTRGVKGAFGVRGPKGSKGE 628

Query: 152 ----GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
               G PG +G  G KGD G PGP G+ G++G  GPKG  G  G I   G  G+PGE G 
Sbjct: 629 KGEDGFPGFKGDMGIKGDRGDPGPIGVRGEDGPEGPKGQAGPLGEI---GSLGVPGEKGK 685

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+P   G+ G PG+ G  G +G  G  GT G+KG  G RG RG+ G  G PG 
Sbjct: 686 LGVP---GLPGYPGRQGAKGSNGFAGPLGTIGDKGKRGIRGERGQRGPTGKPGA 736



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 85/163 (52%), Gaps = 3/163 (1%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S  E   PG  GPIG +G IG  G+ G  GE G++G  G+ G  G +G  G  G  
Sbjct: 969  GQKGSKGEKGDPGPSGPIGIQGPIGHPGQAGQDGEPGKRGQQGMYGQKGDEGYRGFPGVA 1028

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            GP+G  G PGP   PG++G+ G  G MG PG  G  G  G  G  G+ G+PG  G  G  
Sbjct: 1029 GPRGLQGMPGP---PGEKGESGHVGLMGPPGSSGPRGPQGPSGGEGVHGMPGGTGQPGAV 1085

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG+ G PG  G  G  G  G  G +G+SG +G  G P 
Sbjct: 1086 GEKGEPGESGDPGQTGEQGPPGGKGDVGEKGESGPSGAAGAPG 1128



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 91/193 (47%), Gaps = 34/193 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP GQ G +G  G +GV GE+G+ G PG+ G PG QG  G  G  GP G +G  G +
Sbjct: 660 GPEGPKGQAGPLGEIGSLGVPGEKGKLGVPGLPGYPGRQGAKGSNGFAGPLGTIGDKGKR 719

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------------LD 208
           GI G+ G+RGP    G PG  G  G DG+PG  G                         D
Sbjct: 720 GIRGERGQRGP---TGKPGAKGDSGNDGVPGTMGEKGPPGPQGPTGFAGPKGPPGPSGKD 776

Query: 209 GIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI- 264
           G+PG  G  G P   GK GLPG  G+ G  G +GE    GP G RG  G  G PG   + 
Sbjct: 777 GLPGHGGQRGEPGFQGKTGLPGPVGVVGPQGKSGE---IGPMGERGHPGAPGSPGEQGLP 833

Query: 265 CAYKRESCSLLPN 277
            A  RE     P 
Sbjct: 834 GAAGREGAKGDPG 846



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/153 (44%), Positives = 79/153 (51%), Gaps = 15/153 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGP 162
            PG+ GP G +G  G  GE G  G  G  G PG  GP GPQG         +PG  G+ G 
Sbjct: 1025 PGVAGPRGLQGMPGPPGEKGESGHVGLMGPPGSSGPRGPQGPSGGEGVHGMPGGTGQPGA 1084

Query: 163  KGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGM 216
             G+ G PG  G PG  G++GP   KGD+G  G  G  G  G PG+   PG DG  G  G 
Sbjct: 1085 VGEKGEPGESGDPGQTGEQGPPGGKGDVGEKGESGPSGAAGAPGKKGRPGEDGPKGNMGP 1144

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             G PG  G  G+ GIPG +G  GEKG  G  GN
Sbjct: 1145 IGFPGDSGQRGEAGIPGVDGIPGEKGDAGESGN 1177



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 79/157 (50%), Gaps = 24/157 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP+G  G  G  GE+G  GERG  GAPG    PG QG+PG  G+ G KGD   PGP 
Sbjct: 795 GLPGPVGVVGPQGKSGEIGPMGERGHPGAPGS---PGEQGLPGAAGREGAKGD---PGPT 848

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------------GIPGRNGMD 217
           GIP   GK GP+G  G+PG  G+ G  G  G  G +               G  G  G  
Sbjct: 849 GIP---GKNGPQGLRGFPGARGVAGEAGPAGLKGGEGPPGASGSSGPGGERGPSGPAGGI 905

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G+PG+ G  G  G  G  G  GEKG  GP G+ G  G
Sbjct: 906 GLPGRPGGQGPSGPAGEKGNPGEKGPMGPAGHDGAQG 942



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 82/160 (51%), Gaps = 9/160 (5%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGPK 163
            G  GP G  G  G  G  G  G  GEKG PG  GP GP G  G +G           GP 
Sbjct: 897  GPSGPAGGIGLPGRPGGQGPSGPAGEKGNPGEKGPMGPAGHDGAQGSIGPPGSAGPPGPA 956

Query: 164  GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
            GD G  G  G PG +G +G KGD G  G IG+ G  G PG+ G DG PG+ G  G+ G+ 
Sbjct: 957  GDDGDKGELGGPGQKGSKGEKGDPGPSGPIGIQGPIGHPGQAGQDGEPGKRGQQGMYGQK 1016

Query: 224  GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G PG  G  G +GM GP G +G+SG  G+ G P 
Sbjct: 1017 GDEGYRGFPGVAGPRGLQGMPGPPGEKGESGHVGLMGPPG 1056



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 82/172 (47%), Gaps = 24/172 (13%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ G  G  G+ GA GE G  GE G+ G  G  GPPG +G  G++G+ GP G  G PG +
Sbjct: 1071 GVHGMPGGTGQPGAVGEKGEPGESGDPGQTGEQGPPGGKGDVGEKGESGPSGAAGAPGKK 1130

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD--------- 223
            G PG++G +G  G +G+PG  G  G  G+   PG+DGIPG  G  G  G           
Sbjct: 1131 GRPGEDGPKGNMGPIGFPGDSGQRGEAGI---PGVDGIPGEKGDAGESGNAGPPGPSGEP 1187

Query: 224  ------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                        G  GK+G  G  G  GE G  G  G  G  G  G PG P 
Sbjct: 1188 GPTGPPGRRGPLGPAGKEGRQGEKGAKGEIGGEGQPGKTGPVGPQGSPGKPG 1239



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 83/178 (46%), Gaps = 33/178 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------ 160
           G  GP+G  G+ G +G  G +G+RG  G PG  G  G  G+PG  G++            
Sbjct: 705 GFAGPLGTIGDKGKRGIRGERGQRGPTGKPGAKGDSGNDGVPGTMGEKGPPGPQGPTGFA 764

Query: 161 ------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                             G +G+ G+ G  G+PG  G  GP+G  G  G +G  G  G P
Sbjct: 765 GPKGPPGPSGKDGLPGHGGQRGEPGFQGKTGLPGPVGVVGPQGKSGEIGPMGERGHPGAP 824

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G+PG  G +G     G PG  GIPG NG  G +G  G RG  G++G  G+ G
Sbjct: 825 GSPGEQGLPGAAGREGA---KGDPGPTGIPGKNGPQGLRGFPGARGVAGEAGPAGLKG 879



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 82/176 (46%), Gaps = 18/176 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGA------------------PGVVGPPGPQGIP 154
            G  GP G+KG  G KG MG  G  G +G+                   G +G PG +G  
Sbjct: 915  GPSGPAGEKGNPGEKGPMGPAGHDGAQGSIGPPGSAGPPGPAGDDGDKGELGGPGQKGSK 974

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
            G++G  GP G +G  GP G PG  G+ G  G  G  G  G  G +G  G PG+ G  G  
Sbjct: 975  GEKGDPGPSGPIGIQGPIGHPGQAGQDGEPGKRGQQGMYGQKGDEGYRGFPGVAGPRGLQ 1034

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            GM G PG+ G  G  G+ G  G++G +G  GP G  G  G+ G  G P     K E
Sbjct: 1035 GMPGPPGEKGESGHVGLMGPPGSSGPRGPQGPSGGEGVHGMPGGTGQPGAVGEKGE 1090



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 78/168 (46%), Gaps = 30/168 (17%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           GA+G  G +G +GE G  G  G PGP G+P      GP+G +G PG +G PG EG  G K
Sbjct: 540 GAQGPKGNQGIQGEAGPNGQQGTPGPHGLP------GPQGPIGMPGEKGHPGREGPAGEK 593

Query: 185 G---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G                 G  G  G+ G  G  GE G DG PG  G  GI G  G PG  
Sbjct: 594 GIQGPPGAPGPIGYPGTRGVKGAFGVRGPKGSKGEKGEDGFPGFKGDMGIKGDRGDPGPI 653

Query: 230 GIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPGTPAICAYK 268
           G+ G +G  G KG  GP          G +GK G+ G+PG P     K
Sbjct: 654 GVRGEDGPEGPKGQAGPLGEIGSLGVPGEKGKLGVPGLPGYPGRQGAK 701



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 78/211 (36%), Positives = 89/211 (42%), Gaps = 54/211 (25%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVG------PPGPQ 151
           GF   T    P G+ GP G+ GEIG  GE G     G  GE+G PG  G       PGP 
Sbjct: 789 GFQGKTGLPGPVGVVGPQGKSGEIGPMGERGHPGAPGSPGEQGLPGAAGREGAKGDPGPT 848

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPG------------------------DEGKRGPKGDM 187
           GIPG   K GP+G  G+PG +G+ G                        + G  GP G +
Sbjct: 849 GIPG---KNGPQGLRGFPGARGVAGEAGPAGLKGGEGPPGASGSSGPGGERGPSGPAGGI 905

Query: 188 GYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGK---------------DGLPGKD 229
           G PGR G  G  G  GE   PG  G  G  G DG  G                DG  G+ 
Sbjct: 906 GLPGRPGGQGPSGPAGEKGNPGEKGPMGPAGHDGAQGSIGPPGSAGPPGPAGDDGDKGEL 965

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G+ GEKG  GP G  G  G  G PG
Sbjct: 966 GGPGQKGSKGEKGDPGPSGPIGIQGPIGHPG 996



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 79/164 (48%), Gaps = 24/164 (14%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  G +GE G +G+ G  G  GVVGP G  G  G  G+RG  G  G PG QG+PG  G+ 
Sbjct: 780 GHGGQRGEPGFQGKTGLPGPVGVVGPQGKSGEIGPMGERGHPGAPGSPGEQGLPGAAGRE 839

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------------------ 223
           G KGD G  G  G +G  GL G PG  G+ G  G  G+ G +                  
Sbjct: 840 GAKGDPGPTGIPGKNGPQGLRGFPGARGVAGEAGPAGLKGGEGPPGASGSSGPGGERGPS 899

Query: 224 ------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                 GLPG+ G  G +G  GEKG  G +G  G +G +G  G+
Sbjct: 900 GPAGGIGLPGRPGGQGPSGPAGEKGNPGEKGPMGPAGHDGAQGS 943



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 84/187 (44%), Gaps = 36/187 (19%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   +  E   PG  G  GQ GE G  G  G  GE+GE G  G  G PG +G PG++   
Sbjct: 1080 GQPGAVGEKGEPGESGDPGQTGEQGPPGGKGDVGEKGESGPSGAAGAPGKKGRPGED--- 1136

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD--- 217
            GPKG+M   GP G PGD G+R         G  G+ G DG+PGE G  G  G  G     
Sbjct: 1137 GPKGNM---GPIGFPGDSGQR---------GEAGIPGVDGIPGEKGDAGESGNAGPPGPS 1184

Query: 218  ---------------GIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVP 259
                           G  GK+G  G+ G  G  G  G+ G T   GP+G+ GK G  G+ 
Sbjct: 1185 GEPGPTGPPGRRGPLGPAGKEGRQGEKGAKGEIGGEGQPGKTGPVGPQGSPGKPGSEGLR 1244

Query: 260  GTPAICA 266
            G P    
Sbjct: 1245 GIPGPAG 1251



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 91/223 (40%), Gaps = 69/223 (30%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
              T E  PPG +G +G+KGE G  G  G  G++G  G  G  G  GP G PGD G+RG  
Sbjct: 1098 GQTGEQGPPGGKGDVGEKGESGPSGAAGAPGKKGRPGEDGPKGNMGPIGFPGDSGQRG-- 1155

Query: 164  GDMGYPGPQGIPGD---------------------------------------EGKRGPK 184
             + G PG  GIPG+                                       +G++G K
Sbjct: 1156 -EAGIPGVDGIPGEKGDAGESGNAGPPGPSGEPGPTGPPGRRGPLGPAGKEGRQGEKGAK 1214

Query: 185  GDMG---YPGRIGLDGRDGLPGEP---GLDGIPGRNGMDG-------------------- 218
            G++G    PG+ G  G  G PG+P   GL GIPG  G  G                    
Sbjct: 1215 GEIGGEGQPGKTGPVGPQGSPGKPGSEGLRGIPGPAGEPGLLGPPGQTGPPGPMGPAGLP 1274

Query: 219  -IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             + G  G  G  G  G  G  G  G  G +G+RG  GI GVPG
Sbjct: 1275 GLKGDPGFKGDKGHAGLIGLIGPPGEMGEKGDRGPPGIQGVPG 1317



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 90/206 (43%), Gaps = 63/206 (30%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G +G++G  GA G  GV GE G KG  G  G PG   +PG++G +G  G  G  GP
Sbjct: 437 PGPPGKVGKRGRSGADGGRGVPGETGMKGDRGFDGLPG---LPGEKGHKGEFGGQGPAGP 493

Query: 172 ---------------------------------------QGIPGDEGKRGPKGDMGYPGR 192
                                                  QG+ G +G +GPKG+ G  G 
Sbjct: 494 HGKDGEKGSVGPPGPAGSPGEAGARGLVGPRGSPGPPGQQGVNGIDGAQGPKGNQGIQGE 553

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG------------------T 234
            G +G+ G PG     G+PG  G  G+PG+ G PG++G  G                  T
Sbjct: 554 AGPNGQQGTPGP---HGLPGPQGPIGMPGEKGHPGREGPAGEKGIQGPPGAPGPIGYPGT 610

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G  G+ GP+G++G+ G +G PG
Sbjct: 611 RGVKGAFGVRGPKGSKGEKGEDGFPG 636



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 62/128 (48%), Gaps = 27/128 (21%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG- 176
            +G  G+ G +GE G KGE G +G PG  GP GPQG P   GK G +G  G PGP G PG 
Sbjct: 1199 LGPAGKEGRQGEKGAKGEIGGEGQPGKTGPVGPQGSP---GKPGSEGLRGIPGPAGEPGL 1255

Query: 177  --------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
                                 +G  G KGD G+ G IGL G  G  GE G  G P   G+
Sbjct: 1256 LGPPGQTGPPGPMGPAGLPGLKGDPGFKGDKGHAGLIGLIGPPGEMGEKGDRGPP---GI 1312

Query: 217  DGIPGKDG 224
             G+PG  G
Sbjct: 1313 QGVPGPKG 1320



 Score = 47.4 bits (111), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 79/148 (53%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QG  G  G++G +G  G  G RG  G  G+ G  G  G+PG  G++G KG+ G  GP 
Sbjct: 432 GFQGIPGPPGKVGKRGRSGADGGRGVPGETGMKGDRGFDGLPGLPGEKGHKGEFGGQGPA 491

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G +G++G  G  G  G  G  G  GL G  G  G PG+ G++GI G  G  G  GI 
Sbjct: 492 GPHGKDGEKGSVGPPGPAGSPGEAGARGLVGPRGSPGPPGQQGVNGIDGAQGPKGNQGIQ 551

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G NG++G  GP G  G  G  G+PG
Sbjct: 552 GEAGPNGQQGTPGPHGLPGPQGPIGMPG 579



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 65/171 (38%), Gaps = 51/171 (29%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDM------------------GYPGPQGIPGDEGKRGPKG 185
           + GPPGP G+ G  G  GP G                    G PGP G  G  G+ G  G
Sbjct: 394 MKGPPGPNGMTGRSGPLGPPGSQGSKGDYGDPGPPGPRGFQGIPGPPGKVGKRGRSGADG 453

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT----------- 234
             G PG  G+ G  G  G PGL G  G  G  G  G  G  GKDG  G+           
Sbjct: 454 GRGVPGETGMKGDRGFDGLPGLPGEKGHKGEFGGQGPAGPHGKDGEKGSVGPPGPAGSPG 513

Query: 235 -------------------NGTNGEKGMTGPRGN---RGKSGINGVPGTPA 263
                               G NG  G  GP+GN   +G++G NG  GTP 
Sbjct: 514 EAGARGLVGPRGSPGPPGQQGVNGIDGAQGPKGNQGIQGEAGPNGQQGTPG 564



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 68/170 (40%), Gaps = 53/170 (31%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGD-----------------------------------EGK 159
           ERG  G PG+ G  G +G PG+                                   +G 
Sbjct: 338 ERGPPGRPGLNGADGIRGPPGNTVLLPFQFGGDSGHQTVSFQEAQAQSILQQAKLAMKGP 397

Query: 160 RGPKGDMGYPGPQGIPGDEGK------------RGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            GP G  G  GP G PG +G             RG +G  G PG++G  GR G     G 
Sbjct: 398 PGPNGMTGRSGPLGPPGSQGSKGDYGDPGPPGPRGFQGIPGPPGKVGKRGRSGA---DGG 454

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G+PG  GM G  G DGLP   G+PG  G  GE G  GP G  GK G  G
Sbjct: 455 RGVPGETGMKGDRGFDGLP---GLPGEKGHKGEFGGQGPAGPHGKDGEKG 501


>gi|3219172|dbj|BAA28786.1| collagen a1(V) [Mus musculus]
          Length = 1838

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 80/157 (50%), Gaps = 36/157 (22%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------DEGKRGPK 163
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G  G      D G  GP 
Sbjct: 802 GLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPT 861

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G  G  G+PG  G++GPKG +G+P                           G PG +
Sbjct: 862 GEKGKLGVPGLPGYPGRQGPKGSIGFP---------------------------GFPGAN 894

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G PG  G  G++G TGPRG RG  GI G PG
Sbjct: 895 GEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPG 931



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 60/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1404 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 1460

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G  G+
Sbjct: 1461 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGDQGI 1520



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 12/106 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G+ G  G  G +G  GE+G+ G P         G+PG  G++GPKG +G+P   
Sbjct: 841 GPEGPKGRGGPNGDPGPLGPTGEKGKLGVP---------GLPGYPGRQGPKGSIGFP--- 888

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           G PG  G++G +G  G PG  G  G  G  GE G  GI G+ G  G
Sbjct: 889 GFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 934



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 876 PGRQGP---KGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 932

Query: 172 QG 173
           +G
Sbjct: 933 KG 934



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG                   
Sbjct: 1404 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1463

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                     +G  GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1464 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1516



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G+KG++G  G  G  G +G KG+ G        G PG  G++G +G  G PGP
Sbjct: 855 PGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFP------GFPGANGEKGGRGTPGKPGP 908

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIG 194
              +G  G  G+RGP+G  G PG  G
Sbjct: 909 RGQRGPTGPRGERGPRGITGKPGPKG 934



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 61/160 (38%), Gaps = 57/160 (35%)

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGR------DGLPGEP----------------- 205
           PG QG+PG +G  GP G+ G  G+ GL         DG PG P                 
Sbjct: 726 PGAQGLPGPQGAIGPPGEKGPLGKPGL---PGMPGADGPPGHPGKEGPPGEKGGQGPPGP 782

Query: 206 -------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN--- 249
                        G DGI G  G  G  G+DG PG  G  G  G  GE G  GPRG    
Sbjct: 783 QGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGP 842

Query: 250 ---RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
              +G+ G NG PG             L P  E  +L +P
Sbjct: 843 EGPKGRGGPNGDPGP------------LGPTGEKGKLGVP 870



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 69/185 (37%), Gaps = 78/185 (42%)

Query: 139 KGAPGVVGPPGPQGI---------------PGDEGKRG------PKGDMGYPGPQGIPGD 177
           KG PG +GP GP+G+                G +G RG      PKGD G+ G  G+PG+
Sbjct: 582 KGEPGDMGPQGPRGVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGE 641

Query: 178 EGKR------------------------GPKGDMGYPGR------------------IGL 195
           +G R                        GP+G  G PG                    G+
Sbjct: 642 KGHRGDPGPSGPPGIPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGM 701

Query: 196 DGRDGLPG---------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           DG+ G  G                PG  G+PG  G  G PG+ G  GK G+PG  G +G 
Sbjct: 702 DGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGP 761

Query: 241 KGMTG 245
            G  G
Sbjct: 762 PGHPG 766


>gi|164565411|ref|NP_056549.2| collagen alpha-1(V) chain precursor [Mus musculus]
 gi|125987810|sp|O88207.2|CO5A1_MOUSE RecName: Full=Collagen alpha-1(V) chain; Flags: Precursor
 gi|223461040|gb|AAI38448.1| Collagen, type V, alpha 1 [Mus musculus]
 gi|223461042|gb|AAI38450.1| Collagen, type V, alpha 1 [Mus musculus]
          Length = 1838

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 80/157 (50%), Gaps = 36/157 (22%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------DEGKRGPK 163
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G  G      D G  GP 
Sbjct: 802 GLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPT 861

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G  G  G+PG  G++GPKG +G+P                           G PG +
Sbjct: 862 GEKGKLGVPGLPGYPGRQGPKGSIGFP---------------------------GFPGAN 894

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G PG  G  G++G TGPRG RG  GI G PG
Sbjct: 895 GEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPG 931



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 60/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1404 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 1460

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G  G+
Sbjct: 1461 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGDQGI 1520



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 12/106 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G+ G  G  G +G  GE+G+ G P         G+PG  G++GPKG +G+P   
Sbjct: 841 GPEGPKGRGGPNGDPGPLGPTGEKGKLGVP---------GLPGYPGRQGPKGSIGFP--- 888

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           G PG  G++G +G  G PG  G  G  G  GE G  GI G+ G  G
Sbjct: 889 GFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 934



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 876 PGRQGP---KGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 932

Query: 172 QG 173
           +G
Sbjct: 933 KG 934



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG                   
Sbjct: 1404 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1463

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                     +G  GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1464 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1516



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G+KG++G  G  G  G +G KG+ G        G PG  G++G +G  G PGP
Sbjct: 855 PGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFP------GFPGANGEKGGRGTPGKPGP 908

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIG 194
              +G  G  G+RGP+G  G PG  G
Sbjct: 909 RGQRGPTGPRGERGPRGITGKPGPKG 934



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 61/160 (38%), Gaps = 57/160 (35%)

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGR------DGLPGEP----------------- 205
           PG QG+PG +G  GP G+ G  G+ GL         DG PG P                 
Sbjct: 726 PGAQGLPGPQGAIGPPGEKGPLGKPGL---PGMPGADGPPGHPGKEGPPGEKGGQGPPGP 782

Query: 206 -------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN--- 249
                        G DGI G  G  G  G+DG PG  G  G  G  GE G  GPRG    
Sbjct: 783 QGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGP 842

Query: 250 ---RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
              +G+ G NG PG             L P  E  +L +P
Sbjct: 843 EGPKGRGGPNGDPGP------------LGPTGEKGKLGVP 870


>gi|426372321|ref|XP_004053074.1| PREDICTED: collagen alpha-1(II) chain isoform 6 [Gorilla gorilla
           gorilla]
          Length = 1443

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 771 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 830

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 831 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 890

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 891 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 941

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 942 PGQRGERGFPGLPG 955



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 403 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 462

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 463 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 522

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 523 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 582

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 583 GLRGLPG 589



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 757 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 816

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 817 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 876

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 877 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 936

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 937 GIVGLPG 943



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 331 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 390

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 391 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 450

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 451 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 507

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 508 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 536



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 644 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 703

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 704 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 763

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 764 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 814

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 815 DAGAPGPQGPSGAPG 829



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 706 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 759

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 760 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 816

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 817 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 859



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 670 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 719

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 720 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 777

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 778 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 832



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 478 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 537

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 538 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 594

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 595 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 654

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 655 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 690



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 88/213 (41%), Gaps = 57/213 (26%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 807  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 866

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 867  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 926

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 927  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 986

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                 ++G PG +G  G  G  G +G+RG++G 
Sbjct: 987  AGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 1019



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 330 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 383

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 384 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 443

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 444 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 503

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 504 PGRPGEPGLPGAR 516



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 643 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 702

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 703 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 762

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 763 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 810



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 83/210 (39%), Gaps = 66/210 (31%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-- 179
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G  G  
Sbjct: 883  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQRGIV 939

Query: 180  ----KRGPKGDMGYPGRIGLDGRDGLPG---------------------------EPGLD 208
                +RG +G  G PG  G  G+ G PG                            PG D
Sbjct: 940  GLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGAD 999

Query: 209  GIPGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTN 238
            G PGR+G  G+                               G  G  G  G  G +G  
Sbjct: 1000 GPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPTGPTGKQGDRGEAGAQGPMGPSGPA 1059

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1060 GARGIQGPQGPRGDKGEAGEPGERGLKGHR 1089



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 89/226 (39%), Gaps = 84/226 (37%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------------------------ERGEKGAPGVV 145
           G  GP G  GE G  GE G+ G                           ERGE+GA    
Sbjct: 559 GFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGA---- 614

Query: 146 GPPGP---------------------QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKR 181
             PGP                     QG+PG+ G     GP+G+ G+PG +G PG +G +
Sbjct: 615 --PGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 672

Query: 182 GPKGDMGYPGRIGLDGR---------------DGLPGEPGLDGIPGRNGMD---GIPGKD 223
           GP+G  G PG  G  G                 G+PGE G  GI G  G     G  G +
Sbjct: 673 GPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 732

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 733 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 778



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 240 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 299

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 300 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 359

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 360 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 416

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 417 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 447


>gi|301778479|ref|XP_002924660.1| PREDICTED: collagen alpha-1(IV) chain-like [Ailuropoda melanoleuca]
          Length = 1644

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 100/202 (49%), Gaps = 34/202 (16%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--VVGPPGPQG-- 152
            V   G   +  E   PG+ GP   +G  G +GE G KGE+G+ G PG  + G PG +G  
Sbjct: 988  VGGMGLPGTPGEKGVPGIPGP---QGIPGLQGEKGAKGEKGQAGLPGTGIPGRPGDKGDQ 1044

Query: 153  ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                 PG  G++G KG  G PG   +PG  G +G  G +GYPG  GL G  G  G PG D
Sbjct: 1045 GIAGFPGSPGEKGEKGSAGIPG---VPGSPGPKGSPGTVGYPGSPGLPGEKGDKGLPGSD 1101

Query: 209  GIPGRNGMDGIPGK---------DGLPGKDGIPGTNGTNGEKGMT-----------GPRG 248
            GIPG  G  G+PGK          G PG DGIPG+ G  GE G+            G +G
Sbjct: 1102 GIPGIKGEAGLPGKPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGEKG 1161

Query: 249  NRGKSGINGVPGTPAICAYKRE 270
            ++G  G  G  G+P I   K E
Sbjct: 1162 SKGDVGFPGQAGSPGIPGSKGE 1183



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 107/226 (47%), Gaps = 38/226 (16%)

Query: 44   KGDIFDNSVPQTPHVEFVP--------PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIP 95
            KG +    +P TP  + VP        P L  E   + ++ Q              + +P
Sbjct: 985  KGSVGGMGLPGTPGEKGVPGIPGPQGIPGLQGEKGAKGEKGQ--------------AGLP 1030

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
               + G      +    G  G  G+KGE G+ G  GV G  G KG+PG VG PG  G+PG
Sbjct: 1031 GTGIPGRPGDKGDQGIAGFPGSPGEKGEKGSAGIPGVPGSPGPKGSPGTVGYPGSPGLPG 1090

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            +      KGD G PG  GIPG       KG+ G PG+ G  G  G  GEPG DGIPG  G
Sbjct: 1091 E------KGDKGLPGSDGIPGI------KGEAGLPGKPGPTGPAGQKGEPGSDGIPGSAG 1138

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G P   GLPG+ G PG  G  GEKG  G  G  G++G  G+PG+
Sbjct: 1139 EKGEP---GLPGR-GFPGFPGAKGEKGSKGDVGFPGQAGSPGIPGS 1180



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 92/185 (49%), Gaps = 33/185 (17%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG    T +   PGL G   Q+G  G  G  G KGE G  G PG  G PGP G+PG  G+
Sbjct: 823 QGLPGLTGQSGHPGLPG---QQGTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPGLPGE 879

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------------------------IGL 195
              KGD G+PG  G  GD G +G KGD+G PG+                        IG 
Sbjct: 880 ---KGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGP 936

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  G  G+PG  G+PG++G  G PG+   PG  G PG  GT G  G+ GP+G+ G  G+
Sbjct: 937 TGDKGSRGDPGTPGVPGKDGQAGHPGQ---PGPKGDPGIGGTPGAPGLPGPKGSVGGMGL 993

Query: 256 NGVPG 260
            G PG
Sbjct: 994 PGTPG 998



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 87/171 (50%), Gaps = 26/171 (15%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GP G KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 935  GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLP 994

Query: 167  ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
                     G PGPQGIPG +G++G KG+         G PGR G  G  G+ G PG  G
Sbjct: 995  GTPGEKGVPGIPGPQGIPGLQGEKGAKGEKGQAGLPGTGIPGRPGDKGDQGIAGFPGSPG 1054

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  GIPG  G PG  G PGT G  G  G+ G +G++G  G +G+PG
Sbjct: 1055 EKGEKGSAGIPGVPGSPGPKGSPGTVGYPGSPGLPGEKGDKGLPGSDGIPG 1105



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 91/177 (51%), Gaps = 28/177 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVG-P--PGPQGIP---GDEGK 159
            PG  GP G  G  G  G  G+ G +G        G PG  G P  PGPQGIP   G++G 
Sbjct: 961  PGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGIPGLQGEKGA 1020

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGR 213
            +G KG  G PG  GIPG  G +G +G  G+PG  G  G        G+PG PG  G PG 
Sbjct: 1021 KGEKGQAGLPG-TGIPGRPGDKGDQGIAGFPGSPGEKGEKGSAGIPGVPGSPGPKGSPGT 1079

Query: 214  NGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGT 261
             G  G P      G  GLPG DGIPG  G     G+ G TGP G +G+ G +G+PG+
Sbjct: 1080 VGYPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGKPGPTGPAGQKGEPGSDGIPGS 1136



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 90/181 (49%), Gaps = 26/181 (14%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGP 150
             GF  S+     PG +G    KG++G  G+ G         +KG++G++G  G +GP G 
Sbjct: 883  HGFPGSSGPRGDPGFKG---DKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPTG- 938

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGL 207
                 D+G RG  G  G PG  G  G  G+ GPKGD    G PG  GL G  G  G  GL
Sbjct: 939  -----DKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGL 993

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR-----GNRGKSGINGVPGTP 262
             G PG  G+ GIPG  G+PG  G  G  G  G+ G+ G       G++G  GI G PG+P
Sbjct: 994  PGTPGEKGVPGIPGPQGIPGLQGEKGAKGEKGQAGLPGTGIPGRPGDKGDQGIAGFPGSP 1053

Query: 263  A 263
             
Sbjct: 1054 G 1054



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 83/171 (48%), Gaps = 24/171 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGP 162
            PG  GP G  G  G KG+ G  G  G +G PG  G  G  G+PG  G          +G 
Sbjct: 865  PGSPGPAGLPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQ 924

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-- 220
            KGD G  G  G  GD+G R   GD G PG  G DG+ G PG+PG  G PG  G  G P  
Sbjct: 925  KGDQGEKGQIGPTGDKGSR---GDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGL 981

Query: 221  ----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                      G  G PG+ G+PG  G  G  G+ G +G +G+ G  G+PGT
Sbjct: 982  PGPKGSVGGMGLPGTPGEKGVPGIPGPQGIPGLQGEKGAKGEKGQAGLPGT 1032



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 76/155 (49%), Gaps = 23/155 (14%)

Query: 132 VKGERGEKGAPGV--VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG- 188
           VKGE+G  G PG+   GP G +G  G  G  G  G  G PG QG PG  G  GPKG+MG 
Sbjct: 799 VKGEKGFPGFPGLDMPGPKGDKGSQGLPGLTGQSGHPGLPGQQGTPGVPGFPGPKGEMGV 858

Query: 189 -----YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDG------- 230
                 PG  G  G  GLPGE G  G PG +G  G PG  G      LPGK G       
Sbjct: 859 MGTPGQPGSPGPAGLPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDM 918

Query: 231 --IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             + G  G  GEKG  GP G++G  G  G PG P 
Sbjct: 919 GSMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGVPG 953



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 86/200 (43%), Gaps = 60/200 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP GQKGE G+ G  G  GE+GE G PG   P    G PG +G++G KGD+G+PG 
Sbjct: 1116 PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFP----GFPGAKGEKGSKGDVGFPGQ 1171

Query: 172  QG---IPGDEGKRG-----------------------PKGDM------------------ 187
             G   IPG +G++G                       PKGD                   
Sbjct: 1172 AGSPGIPGSKGEQGFMGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPMGPP 1231

Query: 188  ------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                        G PG  G  G  G  GEPG  G+PG  G  GI G  G  G  G+PG  
Sbjct: 1232 GLPGLDGLKGDKGNPGWPGAPGAPGPKGEPGFQGLPGIGGSPGITGSKGDMGPPGVPGFQ 1291

Query: 236  GTNGEKGMTGPRGNRGKSGI 255
            G  G  G+ G +G++G  G 
Sbjct: 1292 GQKGLPGLQGTKGDQGDQGF 1311



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 84/175 (48%), Gaps = 39/175 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----DE 178
           EIG  G+ G KG+RG  G  G+ G PGPQG PG          MG PG +G PG    D 
Sbjct: 462 EIGFPGQPGAKGDRGLPGRDGLEGLPGPQGSPGL---------MGQPGAKGEPGEIYFDA 512

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
             +G KGD G+PG+         PG PG  G PGR+G  G+PG  G PG  G+ G  G  
Sbjct: 513 QLKGDKGDPGFPGQ---------PGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPP 563

Query: 239 GEKGMTGPRGN-----------------RGKSGINGVPGTPAICAYKRESCSLLP 276
           G  G  G RG+                 +G++G  G PG+P     K E+  ++P
Sbjct: 564 GGVGFPGSRGDIGPPGPPGFGPIGPVGDKGQAGFPGTPGSPGQPGPKGEAGKVVP 618



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 85/204 (41%), Gaps = 55/204 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PGL G  G KG  G+ G  G+KGE G  G PG  GP G +G PG +G  G  G+ G PG 
Sbjct: 1086 PGLPGEKGDKGLPGSDGIPGIKGEAGLPGKPGPTGPAGQKGEPGSDGIPGSAGEKGEPGL 1145

Query: 171  PQ----GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------------- 207
            P     G PG +G++G KGD+G+PG+ G  G  G  GE G                    
Sbjct: 1146 PGRGFPGFPGAKGEKGSKGDVGFPGQAGSPGIPGSKGEQGFMGPPGPQGQPGLPGAPGHA 1205

Query: 208  -------------------------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                                           DG+ G  G  G PG  G PG  G PG  G
Sbjct: 1206 VEGPKGDRGPQGQPGLPGLPGPMGPPGLPGLDGLKGDKGNPGWPGAPGAPGPKGEPGFQG 1265

Query: 237  TNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G  G++G  G  GVPG
Sbjct: 1266 LPGIGGSPGITGSKGDMGPPGVPG 1289



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 84/168 (50%), Gaps = 28/168 (16%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVV----GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG 176
           KG+ G  G  G  G+ G KG  G V    GPPG QG+PG  G  GP+GD G+PG  G PG
Sbjct: 592 KGQAGFPGTPGSPGQPGPKGEAGKVVPLPGPPGTQGLPGSPGFPGPQGDRGFPGTPGRPG 651

Query: 177 DEGKRGP--------------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G++G                      GD+G PG  G  G +GLPG PG+ G  G  G+
Sbjct: 652 LPGEKGTIGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNGLPGNPGVPGQKGEPGV 711

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G+PG  GLPG  G PGT    GEKG  G  G  G+ G  G PG   I
Sbjct: 712 -GLPGLKGLPGLTGAPGT---PGEKGNIGGPGVPGEHGAIGPPGLQGI 755



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/138 (40%), Positives = 67/138 (48%), Gaps = 25/138 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
            PG  GP G  G +G  G  G+ GE+G+KG PG  G PG +G       PG  G  G KG+
Sbjct: 1068 PGSPGPKGSPGTVGYPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGKPGPTGPAGQKGE 1127

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
               PG  GIPG  G+   KG+ G PGR             G  G PG  G  G  G  G 
Sbjct: 1128 ---PGSDGIPGSAGE---KGEPGLPGR-------------GFPGFPGAKGEKGSKGDVGF 1168

Query: 226  PGKDGIPGTNGTNGEKGM 243
            PG+ G PG  G+ GE+G 
Sbjct: 1169 PGQAGSPGIPGSKGEQGF 1186



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 57/119 (47%), Gaps = 36/119 (30%)

Query: 114 LQGPIGQKGEIGAKGEMGV--------------KGERGEKGAPGVVGPPGPQGIPGDEGK 159
            QGP G KG+ G  G  GV              KGE+G+KG PG       QG+PG    
Sbjct: 199 FQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGF------QGMPG---- 248

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            G KG+ G PGP+G PG +G++G KG  G+PG  G              G+PGR G  G
Sbjct: 249 LGEKGEPGKPGPRGKPGKDGEKGEKGSPGFPGDAGY------------PGLPGREGFKG 295



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 85/181 (46%), Gaps = 42/181 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMG-------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           PG QG  G  G+ GAKGE G       +KG++G+ G PG  G PG  G PG +G      
Sbjct: 487 PGPQGSPGLMGQPGAKGEPGEIYFDAQLKGDKGDPGFPGQPGMPGRAGSPGRDGHP---- 542

Query: 165 DMGYPGPQGIPGDEGKRG------------PKGDMGYPGRIGL--------DGRDGLPGE 204
             G PGP+G PG  G +G             +GD+G PG  G          G+ G PG 
Sbjct: 543 --GLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDIGPPGPPGFGPIGPVGDKGQAGFPGT 600

Query: 205 PGLDGIPGRNGMDG--IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           PG  G PG  G  G  +P    LPG    PGT G  G  G  GP+G+RG  G  G PG P
Sbjct: 601 PGSPGQPGPKGEAGKVVP----LPGP---PGTQGLPGSPGFPGPQGDRGFPGTPGRPGLP 653

Query: 263 A 263
            
Sbjct: 654 G 654


>gi|426372319|ref|XP_004053073.1| PREDICTED: collagen alpha-1(II) chain isoform 5 [Gorilla gorilla
           gorilla]
          Length = 1459

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 787 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 846

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 847 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 906

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 907 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 957

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 958 PGQRGERGFPGLPG 971



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 419 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 478

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 479 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 538

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 539 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 598

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 599 GLRGLPG 605



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 773 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 832

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 833 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 892

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 893 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 952

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 953 GIVGLPG 959



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 347 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 406

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 407 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 466

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 467 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 523

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 524 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 552



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 660 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 719

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 720 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 779

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 780 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 830

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 831 DAGAPGPQGPSGAPG 845



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 722 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 775

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 776 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 832

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 833 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 875



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 686 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 735

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 736 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 793

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 794 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 848



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 494 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 553

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 554 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 610

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 611 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 670

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 671 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 706



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 88/213 (41%), Gaps = 57/213 (26%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 823  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 882

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 883  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 942

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 943  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1002

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                 ++G PG +G  G  G  G +G+RG++G 
Sbjct: 1003 AGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 1035



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 346 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 399

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 400 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 459

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 460 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 519

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 520 PGRPGEPGLPGAR 532



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 659 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 718

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 719 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 778

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 779 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 826



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 83/210 (39%), Gaps = 66/210 (31%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-- 179
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G  G  
Sbjct: 899  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQRGIV 955

Query: 180  ----KRGPKGDMGYPGRIGLDGRDGLPG---------------------------EPGLD 208
                +RG +G  G PG  G  G+ G PG                            PG D
Sbjct: 956  GLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGAD 1015

Query: 209  GIPGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTN 238
            G PGR+G  G+                               G  G  G  G  G +G  
Sbjct: 1016 GPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPTGPTGKQGDRGEAGAQGPMGPSGPA 1075

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1076 GARGIQGPQGPRGDKGEAGEPGERGLKGHR 1105



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 89/226 (39%), Gaps = 84/226 (37%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------------------------ERGEKGAPGVV 145
           G  GP G  GE G  GE G+ G                           ERGE+GA    
Sbjct: 575 GFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGA---- 630

Query: 146 GPPGP---------------------QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKR 181
             PGP                     QG+PG+ G     GP+G+ G+PG +G PG +G +
Sbjct: 631 --PGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 688

Query: 182 GPKGDMGYPGRIGLDGR---------------DGLPGEPGLDGIPGRNGMD---GIPGKD 223
           GP+G  G PG  G  G                 G+PGE G  GI G  G     G  G +
Sbjct: 689 GPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 748

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 749 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 794



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 256 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 315

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 316 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 375

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 376 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 432

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 433 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 463


>gi|410046788|ref|XP_003952260.1| PREDICTED: collagen alpha-1(II) chain [Pan troglodytes]
          Length = 1459

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 787 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 846

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 847 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 906

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 907 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 957

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 958 PGQRGERGFPGLPG 971



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 419 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 478

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 479 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 538

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 539 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 598

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 599 GLRGLPG 605



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 773 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 832

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 833 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 892

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 893 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 952

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 953 GIVGLPG 959



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 347 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 406

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 407 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 466

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 467 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 523

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 524 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 552



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 660 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 719

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 720 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 779

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 780 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 830

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 831 DAGAPGPQGPSGAPG 845



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 722 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 775

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 776 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 832

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 833 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 875



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 686 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 735

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 736 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 793

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 794 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 848



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 494 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 553

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 554 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 610

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 611 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 670

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 671 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 706



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 81/178 (45%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 899  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 951

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 952  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 1009

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG  G  G  GE                   G TG +G+RG++G  G
Sbjct: 1010 GSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1067



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 823  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 882

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 883  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 942

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 943  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1002

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1003 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1033



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 346 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 399

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 400 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 459

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 460 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 519

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 520 PGRPGEPGLPGAR 532



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 659 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 718

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 719 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 778

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 779 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 826



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 89/226 (39%), Gaps = 84/226 (37%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------------------------ERGEKGAPGVV 145
           G  GP G  GE G  GE G+ G                           ERGE+GA    
Sbjct: 575 GFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGA---- 630

Query: 146 GPPGP---------------------QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKR 181
             PGP                     QG+PG+ G     GP+G+ G+PG +G PG +G +
Sbjct: 631 --PGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 688

Query: 182 GPKGDMGYPGRIGLDGR---------------DGLPGEPGLDGIPGRNGMD---GIPGKD 223
           GP+G  G PG  G  G                 G+PGE G  GI G  G     G  G +
Sbjct: 689 GPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 748

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 749 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 794



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 256 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 315

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 316 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 375

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 376 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 432

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 433 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 463



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 173 GIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG  G+RGP   +G  G+PG  GL G  G  G PGLDG  G  G  G+ G+ G PG++
Sbjct: 230 GKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN 289

Query: 230 GIPGTNGTNG 239
           G PG  G  G
Sbjct: 290 GSPGPMGPRG 299



 Score = 39.3 bits (90), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 77/188 (40%), Gaps = 48/188 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G +GP G +G  G +G +G+ G+RGE+G PG+   PGP G PG               
Sbjct: 936  PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL---PGPSGEPGK-------------- 978

Query: 171  PQGIPG---------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------ 215
             QG PG           G  G  G  G PGR G  G DG PG  G  G+ G  G      
Sbjct: 979  -QGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVG 1037

Query: 216  ---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                             G  G  G  G  G  G +G  G +G+ GP+G RG  G  G PG
Sbjct: 1038 APGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPG 1097

Query: 261  TPAICAYK 268
               +  ++
Sbjct: 1098 ERGLKGHR 1105


>gi|119578372|gb|EAW57968.1| collagen, type II, alpha 1 (primary osteoarthritis,
            spondyloepiphyseal dysplasia, congenital), isoform CRA_c
            [Homo sapiens]
          Length = 1488

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97   VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
               +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 816  AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 875

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
            QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 876  QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 935

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 936  SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 986

Query: 247  RGNRGKSGINGVPG 260
             G RG+ G  G+PG
Sbjct: 987  PGQRGERGFPGLPG 1000



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 448 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 507

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 508 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 567

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 568 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 627

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 628 GLRGLPG 634



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 802 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 861

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 862 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 921

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 922 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 981

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 982 GIVGLPG 988



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 376 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 435

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 436 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 495

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 496 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 552

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 553 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 581



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 689 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 748

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 749 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 808

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 809 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 859

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 860 DAGAPGPQGPSGAPG 874



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 751 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 804

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 805 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 861

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 862 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 904



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 715 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 764

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 765 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 822

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 823 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 877



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 523 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 582

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 583 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 639

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 640 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 699

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 700 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 735



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 81/178 (45%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 928  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 980

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 981  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 1038

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG  G  G  GE                   G TG +G+RG++G  G
Sbjct: 1039 GSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1096



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 852  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 911

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 912  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 971

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 972  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1031

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1032 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1062



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 375 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 428

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 429 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 488

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 489 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 548

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 549 PGRPGEPGLPGAR 561



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 688 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 747

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 748 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 807

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 808 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 855



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 684 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 743

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 744 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 803

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 804 KGEVGPPGPAGSAGARGAPG 823



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 285 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 344

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 345 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 404

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 405 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 461

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 462 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 492


>gi|148676427|gb|EDL08374.1| procollagen, type V, alpha 1 [Mus musculus]
          Length = 1838

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 80/157 (50%), Gaps = 36/157 (22%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------DEGKRGPK 163
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G  G      D G  GP 
Sbjct: 802 GLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPT 861

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G  G  G+PG  G++GPKG +G+P                           G PG +
Sbjct: 862 GEKGKLGVPGLPGYPGRQGPKGSIGFP---------------------------GFPGAN 894

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G PG  G  G++G TGPRG RG  GI G PG
Sbjct: 895 GEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPG 931



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 60/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1404 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 1460

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G  G+
Sbjct: 1461 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGDQGI 1520



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 12/106 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G+ G  G  G +G  GE+G+ G P         G+PG  G++GPKG +G+P   
Sbjct: 841 GPEGPKGRGGPNGDPGPLGPTGEKGKLGVP---------GLPGYPGRQGPKGSIGFP--- 888

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           G PG  G++G +G  G PG  G  G  G  GE G  GI G+ G  G
Sbjct: 889 GFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 934



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 876 PGRQGP---KGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 932

Query: 172 QG 173
           +G
Sbjct: 933 KG 934



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG                   
Sbjct: 1404 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1463

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                     +G  GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1464 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1516



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G+KG++G  G  G  G +G KG+ G        G PG  G++G +G  G PGP
Sbjct: 855 PGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFP------GFPGANGEKGGRGTPGKPGP 908

Query: 172 QGI---PGDEGKRGPKGDMGYPGRIG 194
           +G     G  G+RGP+G  G PG  G
Sbjct: 909 RGQRGPTGPRGERGPRGITGKPGPKG 934



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 61/160 (38%), Gaps = 57/160 (35%)

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGR------DGLPGEP----------------- 205
           PG QG+PG +G  GP G+ G  G+ GL         DG PG P                 
Sbjct: 726 PGAQGLPGPQGAIGPPGEKGPLGKPGL---PGMPGADGPPGHPGKEGPPGEKGGQGPPGP 782

Query: 206 -------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN--- 249
                        G DGI G  G  G  G+DG PG  G  G  G  GE G  GPRG    
Sbjct: 783 QGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGP 842

Query: 250 ---RGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
              +G+ G NG PG             L P  E  +L +P
Sbjct: 843 EGPKGRGGPNGDPGP------------LGPTGEKGKLGVP 870



 Score = 39.7 bits (91), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 69/185 (37%), Gaps = 78/185 (42%)

Query: 139 KGAPGVVGPPGPQGI---------------PGDEGKRG------PKGDMGYPGPQGIPGD 177
           KG PG +GP GP+G+                G +G RG      PKGD G+ G  G+PG+
Sbjct: 582 KGEPGDMGPQGPRGVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGE 641

Query: 178 EGKR------------------------GPKGDMGYPGR------------------IGL 195
           +G R                        GP+G  G PG                    G+
Sbjct: 642 KGHRGDPGPSGPPGIPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGM 701

Query: 196 DGRDGLPG---------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           DG+ G  G                PG  G+PG  G  G PG+ G  GK G+PG  G +G 
Sbjct: 702 DGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGP 761

Query: 241 KGMTG 245
            G  G
Sbjct: 762 PGHPG 766


>gi|410952288|ref|XP_003982813.1| PREDICTED: collagen alpha-2(I) chain isoform 1 [Felis catus]
          Length = 1367

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 89/176 (50%), Gaps = 24/176 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGIPGDEGKRGPKGDM 166
           G +GP G+ G  G  G  G++G  G +G PG      V+GPPGP+G  G  G RGP GD 
Sbjct: 380 GKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGRAGVMGPPGPRGATGPAGVRGPNGDA 439

Query: 167 GYP------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGRN 214
           G P      GP+G PG  G  GP G  G  G  G+DGR       G  GEPG  G PG  
Sbjct: 440 GRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGEPGNIGFPGPK 499

Query: 215 GMDGIPGKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G PGK+      GL G  G PG +G NG +G  GP+G +G  G  G  G P  
Sbjct: 500 GPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGF 555



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 80/163 (49%), Gaps = 18/163 (11%)

Query: 113 GLQGPIGQKGEIGAKGEM---------------GVKGERGEKGAPGVVGPPGPQGIPGDE 157
           G  GP G KGE G KGE                G +G  GE G+ G  GPPG +G PG  
Sbjct: 347 GEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSR 406

Query: 158 GKRGPKGD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G  G    MG PGP+G  G  G RGP GD G PG  GL G  G PG PG  G  G+ 
Sbjct: 407 GLPGADGRAGVMGPPGPRGATGPAGVRGPNGDAGRPGEPGLMGPRGFPGAPGNVGPAGKE 466

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G+PG DG PG  G  G  G  G  G  GP+G  G  G NG
Sbjct: 467 GPMGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNG 509



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 85/162 (52%), Gaps = 6/162 (3%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +GF  +     P G +GP+G  G  G  G +G  G RGE   PG +G PGP+G  G
Sbjct: 447 LMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGE---PGNIGFPGPKGPTG 503

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D GK G KG  G  G +G PG +G  G +G  G  G  G  G  G  G PG  G+PG  G
Sbjct: 504 DPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPAG 563

Query: 216 MDG---IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G    PG+ GLPG+ G+PG  G  GE+G  G  G  G SG
Sbjct: 564 TAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSG 605



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 100/224 (44%), Gaps = 30/224 (13%)

Query: 67  EEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKG---E 123
           E  R    E  ++  + P     +     L    G         P G  GP G +G   +
Sbjct: 379 EGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGRAGVMGPPGPRGATGPAGVRGPNGD 438

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKRGP---------KGDMGYPGP 171
            G  GE G+ G RG  GAPG VGP    GP G+PG +G+ GP          G++G+PGP
Sbjct: 439 AGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGEPGNIGFPGP 498

Query: 172 QGIPGDEGKRGPKGDM------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G  GD GK G KG        G PG  G +G  G PG  G+ G  G  G  G PG  GL
Sbjct: 499 KGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGL 558

Query: 226 PGKDGIPGTNGTNGEKGM---------TGPRGNRGKSGINGVPG 260
           PG  G  G  G  GE+G+          GPRG RG  G +G  G
Sbjct: 559 PGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAG 602



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 81/159 (50%), Gaps = 15/159 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGVVGPPGPQGIPGDEG 158
           P G QGP+G+ GE GA G  G  GE+G  G              G++G PG  G+PG  G
Sbjct: 822 PRGDQGPVGRTGETGASGPPGFAGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRG 881

Query: 159 KRG-P--KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           +RG P   G +G PGP GI G  G RGP G +G PG  G  G  G  G PG DG PGR+G
Sbjct: 882 ERGLPGVSGSVGEPGPLGISGPPGARGPSGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDG 941

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G+ G PG  G  G  G  G  G  GP G  G  G
Sbjct: 942 QPGHKGERGYPGNIGPVGAVGAPGPHGPVGPTGKHGNRG 980



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 91/191 (47%), Gaps = 27/191 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
             + G   S  E  P G+ GP G +G    +GA G  G  GE G  G PG  GPPG  G P
Sbjct: 884  GLPGVSGSVGEPGPLGISGPPGARGPSGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQP 943

Query: 155  GDEGKRG------PKGDMGYPGPQGIPGDEGKRGPKGDM---------------GYPGRI 193
            G +G+RG      P G +G PGP G  G  GK G +G+                G  G  
Sbjct: 944  GHKGERGYPGNIGPVGAVGAPGPHGPVGPTGKHGNRGEPGPAGVVGPVGAVGPRGPTGPQ 1003

Query: 194  GLDGRDGLPGEPGLDGIPG---RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G+ G  G PG+ G  G+PG    NG+ G+PG  G  G  G PG+ G  G +G  GP G  
Sbjct: 1004 GIRGDKGEPGDKGPRGLPGLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPM 1063

Query: 251  GKSGINGVPGT 261
            GK G  G PG+
Sbjct: 1064 GKDGRTGHPGS 1074



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 77/152 (50%), Gaps = 6/152 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ GP G +G  G  G  G  G+ G  G PG++GP G  G PG+ G  G +G MG P   
Sbjct: 416 GVMGPPGPRGATGPAGVRGPNGDAGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLP--- 472

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKD 229
           GI G  G  GP G  G PG IG  G  G  G+PG +G  G  G+    G PG DG  G  
Sbjct: 473 GIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQ 532

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G PG  G  G KG  GP G  G  G+ G  GT
Sbjct: 533 GPPGPQGVQGGKGEQGPAGPPGFQGLPGPAGT 564



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 72/151 (47%), Gaps = 30/151 (19%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------------------GYP 169
           G MG+ G RG    PG  G PGPQG  G  G+ G  G                    G+P
Sbjct: 92  GPMGLMGPRGP---PGASGAPGPQGFQGPAGEPGEPGQTGPAGARGPPGPPGKAGEDGHP 148

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G PG+ G  GP+G  G+PG  GL         PG  GI G NG+DG+ G+ G PG  
Sbjct: 149 GKPGRPGERGVVGPQGARGFPGTPGL---------PGFKGIRGHNGLDGLKGQPGAPGVK 199

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G NG  G TG RG  G+ G  G PG
Sbjct: 200 GEPGAPGENGTPGQTGARGLPGERGRVGAPG 230



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 81/153 (52%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G   ++    P G QGP G+ GE G  G  G +G  G  G  G  G PG  G PG
Sbjct: 96  LMGPRGPPGASGAPGPQGFQGPAGEPGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPG 155

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           + G  GP+G  G+PG  G+PG +G RG  G  G  G+ G  G  G PG PG +G PG+ G
Sbjct: 156 ERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTG 215

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+PG+ G  G  G  G  G++G  G  GP G
Sbjct: 216 ARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG 248



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 80/160 (50%), Gaps = 18/160 (11%)

Query: 98  AMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            +QG         PPG QG   P G  GE+G  GE G+ GE G    PG  GP G +G P
Sbjct: 539 GVQGGKGEQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFG---LPGPAGPRGERGPP 595

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR- 213
           G+ G  GP G +G  GP G PG +G +G  G +G PG  G  G  GLPGE G  GIPG  
Sbjct: 596 GESGAAGPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGPSGPSGLPGERGAAGIPGGK 655

Query: 214 --------NGMDGIPGKD---GLPGKDGIPGTNGTNGEKG 242
                    G  G PG+D   G PG  G PG  G  G++G
Sbjct: 656 GEKGETGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRG 695



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 64/136 (47%), Gaps = 24/136 (17%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL------------ 195
           PGP G+    G RGP G  G PGPQG       +GP G+ G PG+ G             
Sbjct: 91  PGPMGL---MGPRGPPGASGAPGPQGF------QGPAGEPGEPGQTGPAGARGPPGPPGK 141

Query: 196 ---DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
              DG  G PG PG  G+ G  G  G PG  GLPG  GI G NG +G KG  G  G +G+
Sbjct: 142 AGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGE 201

Query: 253 SGINGVPGTPAICAYK 268
            G  G  GTP     +
Sbjct: 202 PGAPGENGTPGQTGAR 217



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 81/196 (41%), Gaps = 57/196 (29%)

Query: 112 PGLQGPIGQKGEIGAKG------------EMGVKGERGEKGAPGVVGPPG---PQGIPGD 156
           PG  GP G +GE+G  G              G+ G +G  G PGV G PG   P+GIPG 
Sbjct: 274 PGPAGPAGPRGEMGLPGVSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGP 333

Query: 157 E------------GKRGPKGDMGYPGPQG------------IPGDEGKRGPKGDMGYPGR 192
                        G+ GP G  G  G +G              G+EGKRGP G+ G  G 
Sbjct: 334 VGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGP 393

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G                  + G PG  GLPG DG  G  G  G +G TGP G RG 
Sbjct: 394 SGPPG------------------LRGSPGSRGLPGADGRAGVMGPPGPRGATGPAGVRGP 435

Query: 253 SGINGVPGTPAICAYK 268
           +G  G PG P +   +
Sbjct: 436 NGDAGRPGEPGLMGPR 451



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 60/128 (46%), Gaps = 24/128 (18%)

Query: 157 EGKRGPKGDM------GYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGL 195
           EG RGP+GD       G  G  G PG  G++GP G+               +G PG +GL
Sbjct: 817 EGLRGPRGDQGPVGRTGETGASGPPGFAGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGL 876

Query: 196 D---GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
               G  GLPG  G  G PG  G+ G PG  G  G  G PG NG  GE G  G  GN G 
Sbjct: 877 PGSRGERGLPGVSGSVGEPGPLGISGPPGARGPSGAVGAPGVNGAPGEAGRDGNPGNDGP 936

Query: 253 SGINGVPG 260
            G +G PG
Sbjct: 937 PGRDGQPG 944



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 61/143 (42%), Gaps = 38/143 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G  G  G KGE GA GE G  G+ G +G PG    VG PGP G  G +G  GP G  G P
Sbjct: 191 GQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG-P 249

Query: 170 -------------------GPQGIPGDEGKRGPKGDMGYPG---------------RIGL 195
                              GP G PG  G  GP+G+MG PG                 G 
Sbjct: 250 IGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEMGLPGVSGPVGPPGNPGANGLTGA 309

Query: 196 DGRDGLPGEPGLDGIPGRNGMDG 218
            G  GLPG  G  G+PG  G+ G
Sbjct: 310 KGAAGLPGVAGAPGLPGPRGIPG 332



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 65/142 (45%), Gaps = 27/142 (19%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---------------MGYPGPQGIP 175
           G++G RG++G  G  G  G  G PG  G++GP G+               +G PG  G+P
Sbjct: 818 GLRGPRGDQGPVGRTGETGASGPPGFAGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLP 877

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG            L G  G  GEPG  GI G  G  G  G  G PG +G PG  
Sbjct: 878 GSRGERG------------LPGVSGSVGEPGPLGISGPPGARGPSGAVGAPGVNGAPGEA 925

Query: 236 GTNGEKGMTGPRGNRGKSGING 257
           G +G  G  GP G  G+ G  G
Sbjct: 926 GRDGNPGNDGPPGRDGQPGHKG 947



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 58/117 (49%), Gaps = 18/117 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
            PG  GP+G  G+ G +GE G  G  G  GA G  GP GPQGI GD+G+ G KG  G P  
Sbjct: 964  PGPHGPVGPTGKHGNRGEPGPAGVVGPVGAVGPRGPTGPQGIRGDKGEPGDKGPRGLPGL 1023

Query: 170  ----------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
                            G QG PG  G  GP+G  G  G +G DGR G PG  G  G+
Sbjct: 1024 KGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPMGKDGRTGHPGSVGPAGV 1080


>gi|30316381|sp|Q64739.3|COBA2_MOUSE RecName: Full=Collagen alpha-2(XI) chain; Flags: Precursor
          Length = 1736

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 88/197 (44%), Gaps = 51/197 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE GA+G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 660 PGPQGAIGPHGEKGARGKPGLPGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 719

Query: 172 QGI---------------------------------------PGDEGKRGPKGDMGY--- 189
           +G+                                       PG  G+ GP+G  G    
Sbjct: 720 RGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGP 779

Query: 190 ---PGRIGLDGRDGLPGEPGLDGIPGRNG------MDGIPGKDGLPGKDGIPGTNGTNGE 240
              PG  GL G  G  G PGL G PGR G        G PG  G  G  G+ G +G  GE
Sbjct: 780 TGDPGPTGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGE 839

Query: 241 KGMTGPRGNRGKSGING 257
           +G TGPRG RG  G  G
Sbjct: 840 RGPTGPRGQRGPRGATG 856



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/149 (46%), Positives = 82/149 (55%), Gaps = 18/149 (12%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG++GVKG+RGE G PG  G  GP+G    +G+ GP GD   P
Sbjct: 730 GLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGP---KGRTGPTGD---P 783

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G+ G++GK G  G  GYPGR G  G  G PG PG  G  G  G+          GK 
Sbjct: 784 GPTGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLS---------GKS 834

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G  G  G +G  GPRG  GKSG  G 
Sbjct: 835 GPRGERGPTGPRGQRGPRGATGKSGAKGT 863



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 83/157 (52%), Gaps = 18/157 (11%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------GPKGDM 166
           G +G  G +G +G  GE+G +G PG+ G PG  G+PG  GK             GP+G +
Sbjct: 655 GAQGLPGPQGAIGPHGEKGARGKPGLPGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPL 714

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GYPGP+G+ G +G RG KG  G        G DG PG  G  G+ G  G  G+PG  G  
Sbjct: 715 GYPGPRGVKGVDGIRGLKGHKGE------KGEDGFPGFKGDIGVKGDRGEVGVPGSRGED 768

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G +G  G  G  G+ G TG  G +GK G+ G+PG P 
Sbjct: 769 GPEGPKGRTGPTGDPGPTGLMGEKGKLGVPGLPGYPG 805



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 97/218 (44%), Gaps = 51/218 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PGL G  GQ+G+ GA+G  G  GE GE+G  G +   GP+G+PG+ G R           
Sbjct: 564 PGLPGEKGQRGDTGAQGLPGPPGEDGERGDDGEI---GPRGLPGESGPRGLLGPKGPPGI 620

Query: 161 -------------GPKGDMGY------------PGPQGIPGDEGKRGP---KGDMGYPGR 192
                        GPKG +G             PG QG+PG +G  GP   KG  G PG 
Sbjct: 621 PGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGAQGLPGPQGAIGPHGEKGARGKPGL 680

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMD---------GIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G+ G DGLPG PG +G PG  G           G PG  G+ G DGI G  G  GEKG 
Sbjct: 681 PGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGE 740

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
            G  G +G  G+ G  G   +   + E     P   T 
Sbjct: 741 DGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTG 778



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 79/165 (47%), Gaps = 30/165 (18%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KG+RGE G PG  G PGP       G+ GP G +G  GP G PG EG++G KG  G P
Sbjct: 1288 GAKGDRGEDGEPGQPGSPGPT------GENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDP 1341

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---------------- 234
            G +G  G+ G  G  GL G PG +G+ G+PG  G  G+ G  G                 
Sbjct: 1342 GAVGAPGKTGPVGPAGLAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLR 1401

Query: 235  --NGTNGEK------GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               G  GEK      G+ GP G +G+ G  G+PG       K E+
Sbjct: 1402 GDAGAKGEKGHPGLIGLIGPTGEQGEKGDRGLPGPQGSPGQKGET 1446



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 91/203 (44%), Gaps = 54/203 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+GQ G  G KGE G  G +G +G  G+ GPPG             +G+PG+ G  
Sbjct: 496 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGM- 554

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----- 215
             KGD G+ G  G+PG++G+RG  G  G PG  G DG  G  GE G  G+PG +G     
Sbjct: 555 --KGDRGFDGLPGLPGEKGQRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLL 612

Query: 216 ----------------MDGIPGKDG---------------LPGKDGIPGTNGTNGEKGMT 244
                           MDG  G  G                PG  G+PG  G  G  G  
Sbjct: 613 GPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGAQGLPGPQGAIGPHGE- 671

Query: 245 GPRGNRGKSGINGVPGTPAICAY 267
             +G RGK G+ G+PG+  +  +
Sbjct: 672 --KGARGKPGLPGMPGSDGLPGH 692



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 79/164 (48%), Gaps = 33/164 (20%)

Query: 125  GAKGEMGVKGERGEKGAPGVVG---PP------GPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GAKG+ G  GE G+ G+PG  G   PP      GP G PG EG++G KG  G PG  G P
Sbjct: 1288 GAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAP 1347

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM------------------D 217
               GK GP G  G  G+ G DG  GLPG  G  G PG  G                    
Sbjct: 1348 ---GKTGPVGPAGLAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDA 1404

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGV 258
            G  G+ G PG  G+ G  G  GEK   G+ GP+G+ G+ G  G+
Sbjct: 1405 GAKGEKGHPGLIGLIGPTGEQGEKGDRGLPGPQGSPGQKGETGI 1448



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 97/230 (42%), Gaps = 57/230 (24%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G         P G QG  G  G+ G +G  G  G RG  G PG+ G  G  G+PG  
Sbjct: 508 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGMKGDRGFDGLPGLP 567

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIG-------------------- 194
           G++G +GD G  G  G PG++G+RG  G++   G PG  G                    
Sbjct: 568 GEKGQRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVR 627

Query: 195 -LDGRDGLPGE---------------PGLDGIP---------------GRNGMDGIPGKD 223
            +DG  G  G                PG  G+P               G+ G+ G+PG D
Sbjct: 628 GMDGPHGPKGSLGPQGEPGPPGQQGTPGAQGLPGPQGAIGPHGEKGARGKPGLPGMPGSD 687

Query: 224 GL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           GL   PGK+G PGT G  G  G  GP G  G  G+ GV G   +  +K E
Sbjct: 688 GLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 737



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 74/140 (52%), Gaps = 21/140 (15%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G MG  G  G  G PG    PG +G  GD G +GP+G  G  GP   PG  G+R   
Sbjct: 487 GPPGPMGYTGRPGPLGQPGS---PGLKGESGDLGPQGPRGPQGLTGP---PGKAGRR--- 537

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEK 241
                 GR G DG  G+PGEPG+ G  G +G+ G+PG+ G     G  G+PG  G +GE+
Sbjct: 538 ------GRAGADGARGMPGEPGMKGDRGFDGLPGLPGEKGQRGDTGAQGLPGPPGEDGER 591

Query: 242 ---GMTGPRGNRGKSGINGV 258
              G  GPRG  G+SG  G+
Sbjct: 592 GDDGEIGPRGLPGESGPRGL 611



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 71/149 (47%), Gaps = 27/149 (18%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
            G    T E  PPG   P+G++G  G  G  G +GE+G KG PG VG PG   P G  G  
Sbjct: 1303 GSPGPTGENGPPG---PLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGLA 1359

Query: 158  GKRGPKGDMGYPGP---QGIPGDEGKR------------------GPKGDMGYPGRIGLD 196
            GK GP G  G PG    QG PG  G+                   G KG+ G+PG IGL 
Sbjct: 1360 GKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLI 1419

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1420 GPTGEQGEKGDRGLPGPQGSPGQKGETGI 1448



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 79/188 (42%), Gaps = 42/188 (22%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP------ 169
            GP G  G +G  G  G KGE GE G+PGV G PG +G  G+ G++G  G  G        
Sbjct: 1195 GPQGSPGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQAGEAGPPGPK 1254

Query: 170  ------GPQGIP---------------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                  GP+G P                     G +G RG  G+ G PG  G  G +G P
Sbjct: 1255 GPTGDNGPKGNPGPVGFPGDPGPPGEAGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPP 1314

Query: 203  GE---------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G          PG +G  G  G  G PG  G PGK G  G  G  G+ G  G RG  G  
Sbjct: 1315 GPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGLAGKPGPDGLRGLPGSV 1374

Query: 254  GINGVPGT 261
            G  G PG 
Sbjct: 1375 GQQGRPGA 1382



 Score = 43.5 bits (101), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 86/227 (37%), Gaps = 84/227 (37%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKR-------------- 160
             G  GE GA+G  G  G +G++G  G  GPPGP   QG+PG  G++              
Sbjct: 1122 AGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDGGPMGPPGP 1181

Query: 161  -------------------------GPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGR 192
                                     GP G+ G PG  G PG +G+   +GP+G+ G  G 
Sbjct: 1182 PGPRGPAGPNGADGPQGSPGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGE 1241

Query: 193  IGLDG---------------------------------------RDGLPGEPGLDGIPGR 213
             G  G                                       +DG  G+ G DG PG+
Sbjct: 1242 SGQAGEAGPPGPKGPTGDNGPKGNPGPVGFPGDPGPPGEAGPRGQDGAKGDRGEDGEPGQ 1301

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G++G PG  G  G  GT G +G  G +G +G  G  G PG
Sbjct: 1302 PGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPG 1348



 Score = 43.1 bits (100), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 97/274 (35%), Gaps = 114/274 (41%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +  ++G      E   PG +G IG KG+   +GE+GV G RGE G  G  G  GP G PG
Sbjct: 728 IRGLKGHKGEKGEDGFPGFKGDIGVKGD---RGEVGVPGSRGEDGPEGPKGRTGPTGDPG 784

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG---------RIGLDGRDGLPGEPG 206
             G  G KG +G PG   +PG  G++GPKG +G+PG           GL G+ G  GE G
Sbjct: 785 PTGLMGEKGKLGVPG---LPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERG 841

Query: 207 LDGIPGRNGMDGIPGKD------------------GLPG------------------KDG 230
             G  G+ G  G  GK                   GLPG                  KDG
Sbjct: 842 PTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPAGKDG 901

Query: 231 IPGTNGTNGE---------------------KGMTGPRGNRGKS---------------- 253
           +PG  G  GE                      G +GP G RG S                
Sbjct: 902 LPGHPGQRGEVGFQGKTGPPGPPGVVGPQGTAGESGPMGERGHSGPPGPPGEQGLPGTSG 961

Query: 254 --------------------------GINGVPGT 261
                                     G  G+PGT
Sbjct: 962 KEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGT 995



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 77/163 (47%), Gaps = 27/163 (16%)

Query: 119  GQKGEIGAKGEMGVKGER---------------------GEKGAPGVVGPPGPQGIPGDE 157
            G KGE+G  G+ G KG +                     G  G PG  GP G  G  GDE
Sbjct: 1084 GDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDE 1143

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---GIPGRN 214
            G RG  G  G  G QG+PG  G++G  GD G  G  G  G  G  G  G D   G PG  
Sbjct: 1144 GTRGFNGPPGPIGLQGLPGPSGEKGETGDGGPMGPPGPPGPRGPAGPNGADGPQGSPGGV 1203

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G PG+ G PG+ G P   G  GE G+ GPRG RG+ G +G
Sbjct: 1204 GNLGPPGEKGEPGESGSP---GVQGEPGVKGPRGERGEKGESG 1243


>gi|256075208|ref|XP_002573912.1| Collagen alpha-1(I) chain precursor [Schistosoma mansoni]
          Length = 1029

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 86/152 (56%), Gaps = 9/152 (5%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGYP 169
           G QGP+G  G  GA G  G KG+RG  GA G  G  GP G PG  G   +RG +G++G+ 
Sbjct: 174 GPQGPVGNPGRPGASGPAGQKGDRGLTGAKGEKGEKGPTGTPGHPGLSKERGIQGEIGHD 233

Query: 170 GPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  G+ G+ G+RGP+G MG    PG  G  GR GL G  G  G PG  G++G  G  GL 
Sbjct: 234 GRPGVRGEPGQRGPEGSMGVAGRPGERGTMGRSGLQGPKGAQGEPGSVGVEGPTGIQGLK 293

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G+    G  G  GE+G TGPRG RG  G  G+
Sbjct: 294 GEK---GQLGRPGERGETGPRGERGPIGPIGI 322



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 74/143 (51%), Gaps = 9/143 (6%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           E G  G  GV+GP GP G PG  G  GP G  G    +G+ G +G++G KG  G PG  G
Sbjct: 163 ESGPTGRAGVMGPQGPVGNPGRPGASGPAGQKGD---RGLTGAKGEKGEKGPTGTPGHPG 219

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRG 251
           L    G+ GE G DG PG   + G PG+ G  G  G+   PG  GT G  G+ GP+G +G
Sbjct: 220 LSKERGIQGEIGHDGRPG---VRGEPGQRGPEGSMGVAGRPGERGTMGRSGLQGPKGAQG 276

Query: 252 KSGINGVPGTPAICAYKRESCSL 274
           + G  GV G   I   K E   L
Sbjct: 277 EPGSVGVEGPTGIQGLKGEKGQL 299



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 47/86 (54%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           QGP G  G  GA G  G +GE G++GAPG  G  G  G PG  G  G  G++G  GP G 
Sbjct: 586 QGPQGPSGNKGAMGMTGPRGETGQRGAPGPTGATGDVGEPGLTGPPGLNGNIGRKGPTGQ 645

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDG 200
            G  G RG +GD G PG+ G  G  G
Sbjct: 646 RGQPGVRGKQGDAGEPGKTGEAGPHG 671



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL    G +GEIG  G  GV+GE   RG +G+ GV G PG +G  G  G +GPKG  G 
Sbjct: 218 PGLSKERGIQGEIGHDGRPGVRGEPGQRGPEGSMGVAGRPGERGTMGRSGLQGPKGAQGE 277

Query: 169 PGPQGIPGD---EGKRGPKGDMGYPGRIGLDG 197
           PG  G+ G    +G +G KG +G PG  G  G
Sbjct: 278 PGSVGVEGPTGIQGLKGEKGQLGRPGERGETG 309



 Score = 46.2 bits (108), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 9/61 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP G  G +G +G MG +G RG++G PG VGP GP   PG +G+ GP      PGP
Sbjct: 844 PGDQGPRGPSGPVGERGPMGARGSRGDRGDPGEVGPLGP---PGRDGELGP------PGP 894

Query: 172 Q 172
           Q
Sbjct: 895 Q 895



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 77/186 (41%), Gaps = 48/186 (25%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------------EGKRGPKG 164
           ++G+ G  G  G  G  G  G PGV G PGPQGI G                +G+ G KG
Sbjct: 61  ERGQAGPAGTPGTPGRDGRSGVPGVQGSPGPQGIVGPPGEPGGEGSPGPQGYQGQTGDKG 120

Query: 165 DMGYPGPQGIPGDEGKRGPK---------------------------GDMGYPGRIGLDG 197
           D G+    G  G +G  GP+                           G  G  G +G  G
Sbjct: 121 DTGF---DGHKGSQGPMGPQGPQGPTGPVGPPGPMGPPGPSGPRGESGPTGRAGVMGPQG 177

Query: 198 RDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G PG PG  G  G+    G+ G  G+ G  G  G PG  G + E+G+ G  G+ G+ G
Sbjct: 178 PVGNPGRPGASGPAGQKGDRGLTGAKGEKGEKGPTGTPGHPGLSKERGIQGEIGHDGRPG 237

Query: 255 INGVPG 260
           + G PG
Sbjct: 238 VRGEPG 243



 Score = 40.0 bits (92), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 29/42 (69%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
           PPGL G IG+KG  G +G+ GV+G++G+ G PG  G  GP G
Sbjct: 630 PPGLNGNIGRKGPTGQRGQPGVRGKQGDAGEPGKTGEAGPHG 671


>gi|158298429|ref|XP_318597.4| AGAP009581-PA [Anopheles gambiae str. PEST]
 gi|157013876|gb|EAA14403.5| AGAP009581-PA [Anopheles gambiae str. PEST]
          Length = 997

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 84/163 (51%), Gaps = 30/163 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGYP 169
           G +G  GQ G  GA+GE+G++G  G +G  G+ GPPG     G PG  G+RGP G+ G P
Sbjct: 538 GPKGDTGQPGSPGAQGEIGMQGPEGPRGFIGLPGPPGNNGKDGPPGASGERGPPGENGNP 597

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG-------------------- 209
           GP G PG  G +GP G+ G  G  G+ G  GLPGEPG+ G                    
Sbjct: 598 GPIGAPGVVGPQGPTGEPGPVGEPGIPGLPGLPGEPGVPGDTGKEGQSGPPGPPGKNGPQ 657

Query: 210 -------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                   PG  GM G+PG  GL G+ G+PG  G  G+KG  G
Sbjct: 658 GGQGLPGFPGERGMMGMPGLPGLKGELGLPGLPGPIGDKGQPG 700



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 100/224 (44%), Gaps = 72/224 (32%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQG------------IPGDE 157
           G +G  G++G  G KG+MG  GERG     GAPG  GP GP+G            + GD+
Sbjct: 412 GDKGEKGEQGHDGDKGDMGTPGERGHPGVTGAPGSEGPEGPKGFEGPRGETGMMGLTGDK 471

Query: 158 GKRG------------PKGDMGYPGPQGIPGDEGKR------------------------ 181
           GK+G             KGD G  G  G+PG++G+R                        
Sbjct: 472 GKQGVQGFPGYPGPPGDKGDKGSFGMAGLPGEKGERGNTGLQGERGEVGPRGFRGPRGRR 531

Query: 182 ------GPKGDMGYP------GRIGLDGRD------GLPGEP---GLDGIPGRNGMDGIP 220
                 GPKGD G P      G IG+ G +      GLPG P   G DG PG +G  G P
Sbjct: 532 GADGATGPKGDTGQPGSPGAQGEIGMQGPEGPRGFIGLPGPPGNNGKDGPPGASGERGPP 591

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G++G PG  G PG  G  G  G  GP G  G  G+ G+PG P +
Sbjct: 592 GENGNPGPIGAPGVVGPQGPTGEPGPVGEPGIPGLPGLPGEPGV 635



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 79/158 (50%), Gaps = 15/158 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G  G  G  G  G KG+ G +G  G +G PG +G  GD+G+RG  GD G  G 
Sbjct: 360 PGLPGADGPPGRDGNPGIAGPKGDVGPQGVQGPIGFPGNRGPKGDDGERGSAGDKGEKGE 419

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           QG  GD+G  G  G+ G+PG  G  G +G  G  G +G  G  GM G+ G  G   K G+
Sbjct: 420 QGHDGDKGDMGTPGERGHPGVTGAPGSEGPEGPKGFEGPRGETGMMGLTGDKG---KQGV 476

Query: 232 ------------PGTNGTNGEKGMTGPRGNRGKSGING 257
                        G  G+ G  G+ G +G RG +G+ G
Sbjct: 477 QGFPGYPGPPGDKGDKGSFGMAGLPGEKGERGNTGLQG 514



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 90/246 (36%), Gaps = 81/246 (32%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGI 153
           + MQG          PG  G  G+ G  GA GE G  GE G  G   APGVVGP GP G 
Sbjct: 555 IGMQGPEGPRGFIGLPGPPGNNGKDGPPGASGERGPPGENGNPGPIGAPGVVGPQGPTGE 614

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKR------------------------GPKGDMGY 189
           PG  G+ G  G  G PG  G+PGD GK                         G +G MG 
Sbjct: 615 PGPVGEPGIPGLPGLPGEPGVPGDTGKEGQSGPPGPPGKNGPQGGQGLPGFPGERGMMGM 674

Query: 190 PGRIGLDGRDGLPGEPG---------------------------------LDGIPGRNGM 216
           PG  GL G  GLPG PG                                   G  G  G+
Sbjct: 675 PGLPGLKGELGLPGLPGPIGDKGQPGEPGKEGPPGAEGRPGPPGPPGPGGAKGERGEQGL 734

Query: 217 DGIPGKDGLPGKD---------------------GIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G  G+DGLPG+                      G PG  G  G +G  GP G+ G  G 
Sbjct: 735 VGPVGRDGLPGQRGLAGPPGPVGPPGEDGDKGDMGPPGEKGFKGAQGEAGPVGSPGSQGS 794

Query: 256 NGVPGT 261
            G PG 
Sbjct: 795 RGEPGA 800



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 75/162 (46%), Gaps = 39/162 (24%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------------------MGVKGERG 137
           ++ M G      E   PGL GPIG KG+ G  G+                   G KGERG
Sbjct: 671 MMGMPGLPGLKGELGLPGLPGPIGDKGQPGEPGKEGPPGAEGRPGPPGPPGPGGAKGERG 730

Query: 138 EKGAPGVVGPPGPQGIPGDEG------------KRGPKGDMGYPGPQGIPGDEGKRGP-- 183
           E+G   +VGP G  G+PG  G            + G KGDMG PG +G  G +G+ GP  
Sbjct: 731 EQG---LVGPVGRDGLPGQRGLAGPPGPVGPPGEDGDKGDMGPPGEKGFKGAQGEAGPVG 787

Query: 184 ----KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
               +G  G PG +G  G  G PGE G  G  G +G  G+PG
Sbjct: 788 SPGSQGSRGEPGAVGPQGEKGPPGEIGRTGPKGEDGPTGLPG 829



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 70/163 (42%), Gaps = 39/163 (23%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------------------R 160
           GE G  G  G+ G +GE G PG+ GP G +G PG+ GK                     +
Sbjct: 667 GERGMMGMPGLPGLKGELGLPGLPGPIGDKGQPGEPGKEGPPGAEGRPGPPGPPGPGGAK 726

Query: 161 GPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLPGEP 205
           G +G+ G  GP G  G  G+R               G KGDMG PG  G  G     GE 
Sbjct: 727 GERGEQGLVGPVGRDGLPGQRGLAGPPGPVGPPGEDGDKGDMGPPGEKGFKGAQ---GEA 783

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           G  G PG  G  G PG  G  G+ G PG  G  G KG  GP G
Sbjct: 784 GPVGSPGSQGSRGEPGAVGPQGEKGPPGEIGRTGPKGEDGPTG 826



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 90/250 (36%), Gaps = 93/250 (37%)

Query: 101 GFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
           G   ++ E  PPG  G   PIG  G +G +G  G  G  GE G PG+ G PG  G+PGD 
Sbjct: 580 GPPGASGERGPPGENGNPGPIGAPGVVGPQGPTGEPGPVGEPGIPGLPGLPGEPGVPGDT 639

Query: 158 GKR------------------------GPKGDMGYPGPQGIPGD---EGKRGPKGDMGYP 190
           GK                         G +G MG PG  G+ G+    G  GP GD G P
Sbjct: 640 GKEGQSGPPGPPGKNGPQGGQGLPGFPGERGMMGMPGLPGLKGELGLPGLPGPIGDKGQP 699

Query: 191 GRIGLD---------------------------------GRDGLPGE------------- 204
           G  G +                                 GRDGLPG+             
Sbjct: 700 GEPGKEGPPGAEGRPGPPGPPGPGGAKGERGEQGLVGPVGRDGLPGQRGLAGPPGPVGPP 759

Query: 205 -----------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------GMTGPR 247
                      PG  G  G  G  G  G  G  G  G PG  G  GEK      G TGP+
Sbjct: 760 GEDGDKGDMGPPGEKGFKGAQGEAGPVGSPGSQGSRGEPGAVGPQGEKGPPGEIGRTGPK 819

Query: 248 GNRGKSGING 257
           G  G +G+ G
Sbjct: 820 GEDGPTGLPG 829


>gi|111118976|ref|NP_001835.3| collagen alpha-1(II) chain isoform 1 precursor [Homo sapiens]
 gi|124056489|sp|P02458.3|CO2A1_HUMAN RecName: Full=Collagen alpha-1(II) chain; AltName: Full=Alpha-1
           type II collagen; Contains: RecName: Full=Collagen
           alpha-1(II) chain; Contains: RecName:
           Full=Chondrocalcin; Flags: Precursor
 gi|95132445|gb|AAI16450.1| Collagen, type II, alpha 1 [Homo sapiens]
          Length = 1487

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 815 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 874

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 875 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 934

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 935 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 985

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 986 PGQRGERGFPGLPG 999



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 447 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 506

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 507 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 566

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 567 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 626

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 627 GLRGLPG 633



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 860

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 920

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 921 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 980

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 981 GIVGLPG 987



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 434

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 435 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 494

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 495 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 551

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 552 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 580



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 747

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 808 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 858

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 859 DAGAPGPQGPSGAPG 873



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 750 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 804 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 860

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 714 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 763

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 764 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 821

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 822 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 876



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 638

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 698

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 699 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 734



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 81/178 (45%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 927  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 979

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 980  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 1037

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG  G  G  GE                   G TG +G+RG++G  G
Sbjct: 1038 GSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1095



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 851  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 910

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 911  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 970

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 971  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1030

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1031 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1061



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 374 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 427

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 428 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 487

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 488 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 547

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 548 PGRPGEPGLPGAR 560



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 687 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 746

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 747 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 806

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 807 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 854



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 683 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 742

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 743 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 802

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 803 KGEVGPPGPAGSAGARGAPG 822



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 284 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 343

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 403

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 404 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 460

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 461 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 491


>gi|440901132|gb|ELR52129.1| Collagen alpha-1(XXVII) chain, partial [Bos grunniens mutus]
          Length = 1288

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 77/145 (53%), Gaps = 12/145 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG+ G        G +G+ G PG+ G PGP G          KG  GYPGP G PG++
Sbjct: 632 GQKGDPGLSPGKAHDGAKGDMGLPGLTGNPGPLGR---------KGQKGYPGPTGHPGEQ 682

Query: 179 GKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G+ GP+G     GYPGR GL G  G PG  G  G  G  G+ G+PG DG  G  G+PG  
Sbjct: 683 GQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKR 742

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G  G RG  G++G PG
Sbjct: 743 GKMGRPGFPGDFGERGPPGLDGNPG 767



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 84/170 (49%), Gaps = 33/170 (19%)

Query: 121 KGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           K   GAKG+MG+ G          +G+KG PG  G PG QG PG EG  G KG   YPG 
Sbjct: 643 KAHDGAKGDMGLPGLTGNPGPLGRKGQKGYPGPTGHPGEQGQPGPEGSPGAKG---YPGR 699

Query: 172 QGIPGDEGKRGPKGDMGY---PGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           QG+PG  G  GPKG  GY   PG  GL   DG  GLPG PG  G  GR G  G  G+ G 
Sbjct: 700 QGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGP 759

Query: 226 PGKDGIPGTN---------------GTNGEKGMTGPRGNRGKSGINGVPG 260
           PG DG PG                 GT G  G  GP+G +G  G  G PG
Sbjct: 760 PGLDGNPGELGLPGPPGVPGLIGDMGTLGPIGYPGPKGMKGLMGNVGEPG 809



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 88/166 (53%), Gaps = 27/166 (16%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---P 169
           GP+G+KG+ G  G  G  GE+G+   +G+PG  G PG QG+PG  G  GPKG  GY   P
Sbjct: 662 GPLGRKGQKGYPGPTGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLP 721

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRN--------- 214
           G  G+PG +G+R   G  G PG+ G  GR G PG+      PGLDG PG           
Sbjct: 722 GLFGLPGSDGER---GLPGVPGKRGKMGRPGFPGDFGERGPPGLDGNPGELGLPGPPGVP 778

Query: 215 ---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G  G  G  G PG  G+ G  G  GE G+ G +G +G  G++G
Sbjct: 779 GLIGDMGTLGPIGYPGPKGMKGLMGNVGEPGLKGDKGEQGVPGVSG 824



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 82/167 (49%), Gaps = 27/167 (16%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            +G  G +G  G  G  GE+G+ G+ GPPGPQG  G  G++G  G+ G+ G +G PG  G 
Sbjct: 1018 RGAKGRRGPRGPDGPAGEQGSKGLKGPPGPQGRLGQPGQQGVAGERGHLGTRGFPGLRGP 1077

Query: 181  RGPKG---------------------DMGYPGRIGLDGRDGLPGEPGLD------GIPGR 213
             GP G                     +MG  G  G  G  GLPGE G+       GIPG 
Sbjct: 1078 SGPPGAKGLPGEPGPQGPQGPIGPPGEMGPKGPPGALGELGLPGEAGMKGDLGPLGIPGE 1137

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G  G+ GL G  G  G +G  G++G  GP G RG+ G  G+ G
Sbjct: 1138 QGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDGERGEKGQEGLKG 1184



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 84/188 (44%), Gaps = 48/188 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------GIPGDEGK 159
           PG  G  G++G+ G +G  G KG  G +G PG VG PGP+            G+PG +G+
Sbjct: 673 PGPTGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGE 732

Query: 160 R------GPKGDMGYPGPQGIPGDEGKRGPK---------------------GDM----- 187
           R      G +G MG P   G PGD G+RGP                      GDM     
Sbjct: 733 RGLPGVPGKRGKMGRP---GFPGDFGERGPPGLDGNPGELGLPGPPGVPGLIGDMGTLGP 789

Query: 188 -GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            GYPG  G+ G  G  GEPGL G  G  G+ G+ G  G  G  G  G  G  G +G  GP
Sbjct: 790 IGYPGPKGMKGLMGNVGEPGLKGDKGEQGVPGVSGDAGFQGDKGSQGLQGFPGARGKPGP 849

Query: 247 RGNRGKSG 254
            G  G  G
Sbjct: 850 VGKVGDKG 857



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 90/172 (52%), Gaps = 30/172 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGV---VGPPGPQGIPGDEGKR------ 160
            GL+GP G +G +G  G+ GV GERG    +G PG+    GPPG +G+PG+ G +      
Sbjct: 1040 GLKGPPGPQGRLGQPGQQGVAGERGHLGTRGFPGLRGPSGPPGAKGLPGEPGPQGPQGPI 1099

Query: 161  ------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                  GPKG  G  G  G+PG+ G +G  G +G PG  GL G+    GEPGL+G  G  
Sbjct: 1100 GPPGEMGPKGPPGALGELGLPGEAGMKGDLGPLGIPGEQGLIGQR---GEPGLEGDSGPA 1156

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKG---------MTGPRGNRGKSGING 257
            G DG+ G  G PG DG  G  G  G KG         +TG RG  GK G  G
Sbjct: 1157 GPDGLKGDRGDPGPDGERGEKGQEGLKGEDGPPGPPGITGVRGPEGKPGKQG 1208



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 86/196 (43%), Gaps = 48/196 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           GL GP+G  G  G++G +G+ G         ERG  G PG  G  G  G PGD G+RGP 
Sbjct: 701 GLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFGERGPP 760

Query: 164 G---------------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G                     DMG  GP G PG +G +G  G++G PG  G  G  G+P
Sbjct: 761 GLDGNPGELGLPGPPGVPGLIGDMGTLGPIGYPGPKGMKGLMGNVGEPGLKGDKGEQGVP 820

Query: 203 G---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN---------------GEKGMT 244
           G   + G  G  G  G+ G PG  G PG  G  G  G+                G  G  
Sbjct: 821 GVSGDAGFQGDKGSQGLQGFPGARGKPGPVGKVGDKGSIGFPGPPGPEGFPGDIGPPGDN 880

Query: 245 GPRGNRGKSGINGVPG 260
           GP G +GK G  G+PG
Sbjct: 881 GPEGVKGKPGARGLPG 896



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 84/181 (46%), Gaps = 39/181 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------PPGPQGIPGDEGKRGPK 163
           G  GP G KG +G  GE G+KG++GE+G PGV G           G QG PG  GK GP 
Sbjct: 791 GYPGPKGMKGLMGNVGEPGLKGDKGEQGVPGVSGDAGFQGDKGSQGLQGFPGARGKPGPV 850

Query: 164 GDMGYPGP---------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG-- 206
           G +G  G                 G PGD    GP+G  G PG  GL G  G  G  G  
Sbjct: 851 GKVGDKGSIGFPGPPGPEGFPGDIGPPGDN---GPEGVKGKPGARGLPGPRGQLGPEGDE 907

Query: 207 ----------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                     L+G PGR G  G PG DGL G+ G  G  G  GE+G+ G  G  G+ GI 
Sbjct: 908 GPMGPPGVPGLEGQPGRKGFPGRPGPDGLKGEPGDAGRPGPVGEQGLLGFIGLVGEPGIM 967

Query: 257 G 257
           G
Sbjct: 968 G 968



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 84/181 (46%), Gaps = 42/181 (23%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIP 154
            M+G   +  E   PGL+G  G++G  G  G+ G +G++G +G    PG  G PGP G  
Sbjct: 797 GMKGLMGNVGE---PGLKGDKGEQGVPGVSGDAGFQGDKGSQGLQGFPGARGKPGPVGKV 853

Query: 155 GDEGK---------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDM------ 187
           GD+G                       GP+G  G PG +G+PG  G+ GP+GD       
Sbjct: 854 GDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGVKGKPGARGLPGPRGQLGPEGDEGPMGPP 913

Query: 188 ------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                 G PGR G  GR   PG  GL G PG  G  G  G+ GL G  G+ G  G  GEK
Sbjct: 914 GVPGLEGQPGRKGFPGR---PGPDGLKGEPGDAGRPGPVGEQGLLGFIGLVGEPGIMGEK 970

Query: 242 G 242
           G
Sbjct: 971 G 971



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 82/170 (48%), Gaps = 36/170 (21%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------GKRGPKGDMGYPGP 171
            +G KG  GA GE+G+ GE G KG  G      P GIPG++      G+ G +GD G  GP
Sbjct: 1105 MGPKGPPGALGELGLPGEAGMKGDLG------PLGIPGEQGLIGQRGEPGLEGDSGPAGP 1158

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+ GD G  GP G+ G  G+ GL G DG PG PG+ G+    G +G PGK G  G+ G 
Sbjct: 1159 DGLKGDRGDPGPDGERGEKGQEGLKGEDGPPGPPGITGV---RGPEGKPGKQGEKGRMGA 1215

Query: 232  PGTNGTNGE---------------------KGMTGPRGNRGKSGINGVPG 260
             G  G  G+                     +G  GP G  G+ G  G PG
Sbjct: 1216 KGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPG 1265



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 108  EYCPPGLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVG 146
            +  PPG  GP G KG+ GA+G  G                     ++G+ G KG PG  G
Sbjct: 873  DIGPPGDNGPEGVKGKPGARGLPGPRGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPG 932

Query: 147  PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------MGYPG 191
            P G +G PGD G+ GP G+ G  G  G+ G+ G  G KGD               MG+PG
Sbjct: 933  PDGLKGEPGDAGRPGPVGEQGLLGFIGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPG 992

Query: 192  RIG---------------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
              G                     + G  G  G  G DG  G  G  G+ G  G  G+ G
Sbjct: 993  IPGVVGNPGEPGPPGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSKGLKGPPGPQGRLG 1052

Query: 231  IPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG  G  GE+G  G RG  G  G +G PG 
Sbjct: 1053 QPGQQGVAGERGHLGTRGFPGLRGPSGPPGA 1083



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 91/231 (39%), Gaps = 72/231 (31%)

Query: 101 GFCNSTKEYCPPGLQGPIGQK------------GEIGAKGEMGVKGERGEKGAPGVVGPP 148
           GF     E  PPGL G  G+             G++G  G +G  G +G KG  G VG P
Sbjct: 749 GFPGDFGERGPPGLDGNPGELGLPGPPGVPGLIGDMGTLGPIGYPGPKGMKGLMGNVGEP 808

Query: 149 GPQGIPGDEGKRGPKGDMGYPGP---------------QGIPGDEGKRGPKGDMGYPGRI 193
           G          +G KG+ G PG                QG PG  GK GP G +G  G I
Sbjct: 809 G---------LKGDKGEQGVPGVSGDAGFQGDKGSQGLQGFPGARGKPGPVGKVGDKGSI 859

Query: 194 ------------------GLDGRDGLPGEPGLDGIPGRNG------------------MD 217
                             G +G +G+ G+PG  G+PG  G                  ++
Sbjct: 860 GFPGPPGPEGFPGDIGPPGDNGPEGVKGKPGARGLPGPRGQLGPEGDEGPMGPPGVPGLE 919

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G PG+ G PG+ G  G  G  G+ G  GP G +G  G  G+ G P I   K
Sbjct: 920 GQPGRKGFPGRPGPDGLKGEPGDAGRPGPVGEQGLLGFIGLVGEPGIMGEK 970



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 80/169 (47%), Gaps = 30/169 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------KGDM 166
            G +GP G  GE+G  GE G+KG+ G  G PG  G  G +G PG EG  GP      KGD 
Sbjct: 1106 GPKGPPGALGELGLPGEAGMKGDLGPLGIPGEQGLIGQRGEPGLEGDSGPAGPDGLKGDR 1165

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
            G PGP G  G++G+ G KG+ G PG  G+ G  G  G+PG  G  GR G  G  G  G  
Sbjct: 1166 GDPGPDGERGEKGQEGLKGEDGPPGPPGITGVRGPEGKPGKQGEKGRMGAKGAKGYQGQL 1225

Query: 227  GK------------------------DGIPGTNGTNGEKGMTGPRGNRG 251
            G+                         G PG  G  GE G+ G  G++G
Sbjct: 1226 GEMGVPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKG 1274



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 95/229 (41%), Gaps = 69/229 (30%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKG---------------EIGAKGEMGVKGERGEKGAP 142
             +QGF  +  +   PG  G +G KG               +IG  G+ G +G +G+ GA 
Sbjct: 836  GLQGFPGARGK---PGPVGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGVKGKPGAR 892

Query: 143  GVVGPPGPQGIPGDE------------GKRGPKGDMGYPGPQGI---PGDEGKRGPKGDM 187
            G+ GP G  G  GDE            G+ G KG  G PGP G+   PGD G+ GP G+ 
Sbjct: 893  GLPGPRGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGPDGLKGEPGDAGRPGPVGEQ 952

Query: 188  GYPGRIGLDGRDGLPGEP------------------GLDGIPG----------------- 212
            G  G IGL G  G+ GE                   G  GIPG                 
Sbjct: 953  GLLGFIGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPGIPGVVGNPGEPGPPGPPGSR 1012

Query: 213  -RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               GM G  G+ G  G DG  G  G+ G KG  GP+G  G+ G  GV G
Sbjct: 1013 GPPGMRGAKGRRGPRGPDGPAGEQGSKGLKGPPGPQGRLGQPGQQGVAG 1061



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 74/162 (45%), Gaps = 42/162 (25%)

Query: 132  VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
            ++G +G +G  G  GP G QG  G +G  GP+G +G PG QG+    G+RG  G  G+PG
Sbjct: 1017 MRGAKGRRGPRGPDGPAGEQGSKGLKGPPGPQGRLGQPGQQGV---AGERGHLGTRGFPG 1073

Query: 192  RIGLDGRDGLPGE---------------------------PGL---DGIPGRNGMD---- 217
               L G  G PG                            PG     G+PG  GM     
Sbjct: 1074 ---LRGPSGPPGAKGLPGEPGPQGPQGPIGPPGEMGPKGPPGALGELGLPGEAGMKGDLG 1130

Query: 218  --GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GIPG+ GL G+ G PG  G +G  G  G +G+RG  G +G
Sbjct: 1131 PLGIPGEQGLIGQRGEPGLEGDSGPAGPDGLKGDRGDPGPDG 1172



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 77/169 (45%), Gaps = 42/169 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--------- 162
            PG  GP G KGE G  G  G  GE+G  G  G+VG PG   I G++G RG          
Sbjct: 928  PGRPGPDGLKGEPGDAGRPGPVGEQGLLGFIGLVGEPG---IMGEKGDRGMMGPPGAPGP 984

Query: 163  KGDMGYPGPQGI---------------------PGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            KG MG+PG  G+                      G +G+RGP+G          DG  G 
Sbjct: 985  KGSMGHPGIPGVVGNPGEPGPPGPPGSRGPPGMRGAKGRRGPRGP---------DGPAGE 1035

Query: 202  PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
             G  GL G PG  G  G PG+ G+ G+ G  GT G  G +G +GP G +
Sbjct: 1036 QGSKGLKGPPGPQGRLGQPGQQGVAGERGHLGTRGFPGLRGPSGPPGAK 1084



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 35/148 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------ 165
            PG QG IGQ+GE G +G+ G  G  G KG     G PGP G  G++G+ G KG+      
Sbjct: 1135 PGEQGLIGQRGEPGLEGDSGPAGPDGLKGD---RGDPGPDGERGEKGQEGLKGEDGPPGP 1191

Query: 166  ---MGYPGPQGIPGDEGKR---GPKGDMGYPGRIG----------------LDGRDGLPG 203
                G  GP+G PG +G++   G KG  GY G++G                   R  L  
Sbjct: 1192 PGITGVRGPEGKPGKQGEKGRMGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSL-- 1249

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
              G  G PGR G  G PG  G  G  GI
Sbjct: 1250 --GPTGAPGRMGAQGEPGLAGYDGHKGI 1275



 Score = 39.7 bits (91), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 61/144 (42%), Gaps = 39/144 (27%)

Query: 100  QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPG------------V 144
            QG      E   PGL+G   P G  G  G +G+ G  GERGEKG  G            +
Sbjct: 1138 QGLIGQRGE---PGLEGDSGPAGPDGLKGDRGDPGPDGERGEKGQEGLKGEDGPPGPPGI 1194

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------RGPKGD 186
             G  GP+G PG +G+   KG MG  G +G  G  G+                  RG  G 
Sbjct: 1195 TGVRGPEGKPGKQGE---KGRMGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGP 1251

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGI 210
             G PGR+G  G  GL G  G  GI
Sbjct: 1252 TGAPGRMGAQGEPGLAGYDGHKGI 1275


>gi|410989165|ref|XP_004000835.1| PREDICTED: collagen alpha-6(IV) chain, partial [Felis catus]
          Length = 1666

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 95/191 (49%), Gaps = 19/191 (9%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERG-----EKGAPGVVGP 147
           L  + GF     E   PG  G  G+    G+IG+ G  G KG  G     E GAPG    
Sbjct: 682 LPELPGFPGPRGEKGLPGFPGLPGKDGLPGKIGSPGLPGSKGASGDIYGAENGAPGEQ-- 739

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            G QG+PGD+G     GD G PGP+G+PG  G  GPKG+ G P   G  G  G PG PG 
Sbjct: 740 -GLQGLPGDQGF---PGDPGLPGPKGLPGKSGLLGPKGERGRP---GTPGHVGQPGSPGP 792

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
           DG  G  G  G+PG  G PG  G PG  G  GE G     G RG  G+ G+PG+P +  +
Sbjct: 793 DGRFGIKGKPGLPGAPGFPGPSGHPGKKGLRGETGPPASAGKRGLPGLKGLPGSPGLIGF 852

Query: 268 KRESCSLLPNS 278
              S   LP S
Sbjct: 853 LGNSG--LPGS 861



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 78/191 (40%), Positives = 91/191 (47%), Gaps = 32/191 (16%)

Query: 112 PGLQGPIGQKGEI-----GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           PGL G  G  G+I     GA GE G++G  G++G PG  G PGP+G+PG  G  GPKG+ 
Sbjct: 716 PGLPGSKGASGDIYGAENGAPGEQGLQGLPGDQGFPGDPGLPGPKGLPGKSGLLGPKGER 775

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------- 204
           G PG  G  G  G  GP G  G  G+ GL G  G PG                       
Sbjct: 776 GRPGTPGHVGQPGSPGPDGRFGIKGKPGLPGAPGFPGPSGHPGKKGLRGETGPPASAGKR 835

Query: 205 --PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
             PGL G+PG  G+ G  G  GLPG  G+PG  G  GEKG     G  G  GI G+PG P
Sbjct: 836 GLPGLKGLPGSPGLIGFLGNSGLPGSTGLPGLPGPKGEKGSA---GLVGFPGIPGLPGIP 892

Query: 263 AICAYKRESCS 273
                K  S S
Sbjct: 893 GASGLKGISGS 903



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 77/194 (39%), Positives = 96/194 (49%), Gaps = 36/194 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG------APGVVGPPG 149
           L+ + G   +  +  P G QGP G  G  G +G  G KGE+GE         PG  G PG
Sbjct: 480 LIGLPGLKGTRGDPGPGGTQGPSGTPGLFGPRGPAGRKGEKGEPTLSSRSRMPGERGDPG 539

Query: 150 PQGIPGDEGKRG--------------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           PQG+PG  G  G                G  G+ G +G+PG  G++G  G  G PG    
Sbjct: 540 PQGLPGKTGIPGKDGVPGLPGLPGLPGDGGQGFQGEKGLPGLPGEKGHSGPAGPPG---- 595

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------IPGT---NGTNGEKGMTGP 246
              +GLPG PG  G+PG  G+DG+PGK GLPG  G      IPG+   +G  G  G  GP
Sbjct: 596 ---NGLPGSPGPRGLPGDQGIDGLPGKQGLPGLPGVTLPCIIPGSYGPSGLPGAPGFPGP 652

Query: 247 RGNRGKSGINGVPG 260
           +G RG  GI G PG
Sbjct: 653 KGVRGLPGIAGQPG 666



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/164 (45%), Positives = 86/164 (52%), Gaps = 21/164 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---GPPGPQGIPGDEGKRGPKGDMGY 168
           PGL GP   KG  G  G +G KGERG  G PG V   G PGP G  G +GK G  G  G+
Sbjct: 754 PGLPGP---KGLPGKSGLLGPKGERGRPGTPGHVGQPGSPGPDGRFGIKGKPGLPGAPGF 810

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------DGIPGRNGMDGIPGK 222
           PGP G PG +G RG  G     G+ GL G  GLPG PGL       G+PG  G+ G+PG 
Sbjct: 811 PGPSGHPGKKGLRGETGPPASAGKRGLPGLKGLPGSPGLIGFLGNSGLPGSTGLPGLPGP 870

Query: 223 D---------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                     G PG  G+PG  G +G KG++G  G  G SG  G
Sbjct: 871 KGEKGSAGLVGFPGIPGLPGIPGASGLKGISGSAGKVGPSGRAG 914



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 99/218 (45%), Gaps = 46/218 (21%)

Query: 86   VWLNAYSRIPLVA-MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
            V L     +P +A M+G          PG  GP+G  G IG KG  G+ G  G  G PG 
Sbjct: 1098 VGLPGSPGLPGIAGMRGNPGLPGSAGHPGATGPLGAPGLIGTKGFPGLPGLHGLNGLPGT 1157

Query: 145  VGP---PGPQ--GIPGDEGKRGPKGDMGYPG----PQGIPGDEGKRGPKGDMGYPGRIGL 195
             G    PGP   G+PG  G  GPKG+ G PG      G PG +G+RG +G  G+ G  GL
Sbjct: 1158 KGTHGTPGPSITGVPGPAGLPGPKGEKGSPGIGIGAPGKPGVKGQRGGRGFPGFQGPAGL 1217

Query: 196  DGRDGL------------PGEPGLDGI---------------------PGRNGMDGIPGK 222
             G  GL            PG PGLDG                      PG  G  GIPG+
Sbjct: 1218 PGAPGLSLPSVIGGQPGEPGRPGLDGERGRPGPPGPPGPPGLSSDQGDPGDPGFPGIPGR 1277

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GIPG +G  GE G+   +G RG+ G  G+PG
Sbjct: 1278 QGPKGDQGIPGFSGLPGELGL---KGMRGEPGFMGIPG 1312



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 96/209 (45%), Gaps = 43/209 (20%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPG-------- 170
           +GE G  G  G KG  G  G PG  + G PGP+G+PGD+G  G  G  G PG        
Sbjct: 573 QGEKGLPGLPGEKGHSGPAGPPGNGLPGSPGPRGLPGDQGIDGLPGKQGLPGLPGVTLPC 632

Query: 171 -------PQGIPGDEGKRGPKGDMGYPG---RIGLDGRDG------------LPGEPGLD 208
                  P G+PG  G  GPKG  G PG   + GL G  G            LPG PG  
Sbjct: 633 IIPGSYGPSGLPGAPGFPGPKGVRGLPGIAGQPGLRGNKGKAGSPGLVHLPELPGFPGPR 692

Query: 209 GIPGRNGMDGIPGKDGLPGK---DGIPGTNGTNG-----EKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G+PGKDGLPGK    G+PG+ G +G     E G  G +G +G  G  G PG
Sbjct: 693 GEKGLPGFPGLPGKDGLPGKIGSPGLPGSKGASGDIYGAENGAPGEQGLQGLPGDQGFPG 752

Query: 261 TPAICAYK---RESCSLLPNSETSQLLIP 286
            P +   K    +S  L P  E  +   P
Sbjct: 753 DPGLPGPKGLPGKSGLLGPKGERGRPGTP 781



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 100/192 (52%), Gaps = 21/192 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G+ G +G KG+    GE G KG +G+ G  G VG PG +G   ++GK G  GD+G PG  
Sbjct: 1051 GISGSLGLKGQ---PGESGFKGVKGKDGLAGDVGFPGSKG---EDGKVGISGDVGLPGSP 1104

Query: 173  GIPGDEGKRG-PK--GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            G+PG  G RG P   G  G+PG  G  G  GL G  G  G+PG +G++G+PG  G  G  
Sbjct: 1105 GLPGIAGMRGNPGLPGSAGHPGATGPLGAPGLIGTKGFPGLPGLHGLNGLPGTKGTHGTP 1164

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGIN-GVPGTPAICAYKR-------ESCSLLPNSETS 281
            G P   G  G  G+ GP+G +G  GI  G PG P +   +        +  + LP +   
Sbjct: 1165 G-PSITGVPGPAGLPGPKGEKGSPGIGIGAPGKPGVKGQRGGRGFPGFQGPAGLPGAPGL 1223

Query: 282  QLLIPPTIVGSE 293
             L   P+++G +
Sbjct: 1224 SL---PSVIGGQ 1232



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 82/160 (51%), Gaps = 33/160 (20%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP--- 183
           KG+ G KGE G  G PG+ GPPG  G  G  GK+G KG  G PGP+G  G EG RGP   
Sbjct: 233 KGKKGSKGEPGLPGLPGISGPPGLPGF-GTAGKKGEKGIPGLPGPRGPMGLEGLRGPPGS 291

Query: 184 ---KGDMGYPGRIG------------LDGRD-----------GLPGEPGLDGIPGRNG-- 215
              KG  G+PG  G            L G D           G PG+PG+ G+PG  G  
Sbjct: 292 QGKKGSSGFPGFNGFPGIKGEKGGIGLPGPDVYIDTDGAVISGYPGDPGVPGLPGLKGDE 351

Query: 216 -MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            + G+PG  GLPG   +PG  G  G +G+ G +G++G  G
Sbjct: 352 GVQGLPGPSGLPGLPALPGVPGALGHQGVPGLKGDKGNPG 391



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 99/221 (44%), Gaps = 74/221 (33%)

Query: 111  PPGLQGPIGQKGE----IGAKGEMGVKGERGEKGAPGVVGP---PGPQGI---------P 154
            P GL GP G+KG     IGA G+ GVKG+RG +G PG  GP   PG  G+         P
Sbjct: 1174 PAGLPGPKGEKGSPGIGIGAPGKPGVKGQRGGRGFPGFQGPAGLPGAPGLSLPSVIGGQP 1233

Query: 155  GDEGKRGPKG------------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
            G+ G+ G  G                  D G PG  G PG  G++GPKGD G PG  GL 
Sbjct: 1234 GEPGRPGLDGERGRPGPPGPPGPPGLSSDQGDPGDPGFPGIPGRQGPKGDQGIPGFSGLP 1293

Query: 197  GRDGLP---GEPGLDGIPGR---------------------NGMDGIPGKD--------- 223
            G  GL    GEPG  GIPG+                     +G  G PG+          
Sbjct: 1294 GELGLKGMRGEPGFMGIPGKVGPPGDPGLPGMKGKAGPRGFSGPRGAPGQTPIAEAVQVP 1353

Query: 224  ----GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                G PG DGIP   G  G+ G+ GP G +G  G+ G+PG
Sbjct: 1354 PGPMGQPGMDGIP---GLTGDPGVQGPVGLQGSKGLPGIPG 1391



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 89/178 (50%), Gaps = 35/178 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGDM 166
            GL+G  G  G++G  G  G  G++G++G PG  G P PQ       + GD+G RG  G  
Sbjct: 896  GLKGISGSAGKVGPSGRAGSAGKKGDRGDPGPAGIPSPQPPILNLQLKGDKGSRGSAGSD 955

Query: 167  GYPGPQGIPGDEGK-------------------RGPKGDMGYPGRIGLDGRDGLPGEPGL 207
            G+PGP+G   D+G+                   +G  G  G PG IGL G  GL G PG+
Sbjct: 956  GFPGPRG---DKGEAGPPGPPGLPGVPGLPSIIKGLNGKPGPPGSIGLRGLPGLKGSPGI 1012

Query: 208  ---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE----KGMTGPRGNRGKSGINGV 258
                GIPG +G  G+ G  GLPG   +PG+ G  G+     G  G +G  G+SG  GV
Sbjct: 1013 TGFPGIPGASGSQGLNGAPGLPGASSLPGSKGDQGQTLGISGSLGLKGQPGESGFKGV 1070



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 96/205 (46%), Gaps = 37/205 (18%)

Query: 96  LVAMQGFCNSTKEYCPPG--LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PG- 149
           L  + G    +    PPG  L G  G +G  G +G  G+ G++G  G PGV  P   PG 
Sbjct: 578 LPGLPGEKGHSGPAGPPGNGLPGSPGPRGLPGDQGIDGLPGKQGLPGLPGVTLPCIIPGS 637

Query: 150 --PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG---------YPGRIGLDGR 198
             P G+PG  G  GPKG  G PG  G PG  G +G  G  G         +PG  G  G 
Sbjct: 638 YGPSGLPGAPGFPGPKGVRGLPGIAGQPGLRGNKGKAGSPGLVHLPELPGFPGPRGEKGL 697

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPG-----KDGIPGTNGTN---------GEKGMT 244
            G PG PG DG+PG+ G  G+PG  G  G     ++G PG  G           G+ G+ 
Sbjct: 698 PGFPGLPGKDGLPGKIGSPGLPGSKGASGDIYGAENGAPGEQGLQGLPGDQGFPGDPGLP 757

Query: 245 GPRGNRGKSGI------NGVPGTPA 263
           GP+G  GKSG+       G PGTP 
Sbjct: 758 GPKGLPGKSGLLGPKGERGRPGTPG 782



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 92/195 (47%), Gaps = 33/195 (16%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G  G+ G  G +G++G  G KG+PG+ G PG   IPG  G +G  G  G PG   +PG +
Sbjct: 987  GLNGKPGPPGSIGLRGLPGLKGSPGITGFPG---IPGASGSQGLNGAPGLPGASSLPGSK 1043

Query: 179  GKRGP----------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---------GI 219
            G +G           KG  G  G  G+ G+DGL G+    G PG  G D         G+
Sbjct: 1044 GDQGQTLGISGSLGLKGQPGESGFKGVKGKDGLAGD---VGFPGSKGEDGKVGISGDVGL 1100

Query: 220  PGKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            PG  GLPG  G+   PG  G+ G  G TGP G  G  G  G PG P +        + LP
Sbjct: 1101 PGSPGLPGIAGMRGNPGLPGSAGHPGATGPLGAPGLIGTKGFPGLPGL-----HGLNGLP 1155

Query: 277  NSETSQLLIPPTIVG 291
             ++ +     P+I G
Sbjct: 1156 GTKGTHGTPGPSITG 1170



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 76/173 (43%), Gaps = 45/173 (26%)

Query: 112 PGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG  GP G  G+ G +GE       G +G  G K            G+PG  G  G  G+
Sbjct: 808 PGFPGPSGHPGKKGLRGETGPPASAGKRGLPGLK------------GLPGSPGLIGFLGN 855

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G PG  G+PG  G +G KG  G           G PG PGL GIPG +G+ GI G  G 
Sbjct: 856 SGLPGSTGLPGLPGPKGEKGSAGL---------VGFPGIPGLPGIPGASGLKGISGSAGK 906

Query: 226 PGKDGIPGTNGTNGEKGMTGP------------------RGNRGKSGINGVPG 260
            G  G  G+ G  G++G  GP                  +G+RG +G +G PG
Sbjct: 907 VGPSGRAGSAGKKGDRGDPGPAGIPSPQPPILNLQLKGDKGSRGSAGSDGFPG 959



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 77/169 (45%), Gaps = 46/169 (27%)

Query: 112  PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGP------------QGIPGD 156
            PG QGP G +G     G  GE+G+KG RGE   PG +G PG             +G  G 
Sbjct: 1275 PGRQGPKGDQGIPGFSGLPGELGLKGMRGE---PGFMGIPGKVGPPGDPGLPGMKGKAGP 1331

Query: 157  EGKRGPKGDMGY----------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
             G  GP+G  G           PGP G PG +G  G  GD G  G +GL G  GLPG PG
Sbjct: 1332 RGFSGPRGAPGQTPIAEAVQVPPGPMGQPGMDGIPGLTGDPGVQGPVGLQGSKGLPGIPG 1391

Query: 207  LDGIPGRNGM---------------DGIPGKDGLPGKDGIPGTNGTNGE 240
             DG+   NG+                G PG +G PGK G  GT G  G+
Sbjct: 1392 KDGL---NGLIGPPGPLGDPGLPGLQGPPGLEGAPGKKGPFGTAGMPGQ 1437


>gi|332206393|ref|XP_003252275.1| PREDICTED: collagen alpha-1(II) chain isoform 1 [Nomascus
           leucogenys]
          Length = 1487

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 815 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 874

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 875 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 934

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 935 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 985

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 986 PGQRGERGFPGLPG 999



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 88/187 (47%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 447 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 506

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G+PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 507 GERGAPGNRGVPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 566

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G +GE G  G +G  G  
Sbjct: 567 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGASGEPGKAGEKGLPGAP 626

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 627 GLRGLPG 633



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 860

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 920

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 921 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 980

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 981 GIVGLPG 987



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 747

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 808 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 858

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 859 DAGAPGPQGPSGAPG 873



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 750 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 804 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 860

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 83/186 (44%), Gaps = 36/186 (19%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-------- 170
           G+ G  GA+G  G +G RGE G PG  GP G  G PG +G  G KG  G PG        
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 434

Query: 171 ----PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGMD------ 217
               P G  G  G  GPKG  G PG  G  G  G  GEP   G  G PG  G +      
Sbjct: 435 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 494

Query: 218 ---------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                          G PG  G+PG+DG+ G  G  GE+G +G  G +G +G  G PG P
Sbjct: 495 GEPGGVGPIGPPGERGAPGNRGVPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEP 554

Query: 263 AICAYK 268
            +   +
Sbjct: 555 GLPGAR 560



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 714 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 763

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 764 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 821

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 822 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 876



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGASGEPGKA---GEKGLPGAPGLRGLPGKDGET 638

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 698

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 699 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 734



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 81/178 (45%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 927  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 979

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 980  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 1037

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG  G  G  GE                   G TG +G+RG++G  G
Sbjct: 1038 GSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1095



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 851  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 910

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 911  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 970

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 971  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1030

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1031 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1061



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 687 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 746

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 747 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 806

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 807 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 854



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 683 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 742

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 743 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 802

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 803 KGEVGPPGPAGSAGARGAPG 822



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 284 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGESGSPGPMGPRGLPGERGRTGPAGAAGA 343

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 403

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 404 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 460

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 461 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 491


>gi|410959886|ref|XP_003986529.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(X) chain [Felis
           catus]
          Length = 674

 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/156 (42%), Positives = 80/156 (51%), Gaps = 30/156 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEK---GAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G +GPIG  G  GAKGE G  G  GE    G PG +GP GP+GIPG++G  GPKG+ G  
Sbjct: 308 GQRGPIGLPGSPGAKGEQGPAGHPGEPGLTGPPGNMGPQGPKGIPGNQGIPGPKGETGPA 367

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG----- 224
           GP G PG +G+R         G  GLDG+ G PGEPG  G+    G  G+PG  G     
Sbjct: 368 GPAGHPGAKGER---------GSSGLDGKPGYPGEPGTSGL---KGNPGLPGPKGDPGVK 415

Query: 225 ----------LPGKDGIPGTNGTNGEKGMTGPRGNR 250
                       G  G+PG NG  G +G  G  G R
Sbjct: 416 GPPGLPGPVGPAGAKGVPGHNGEAGPRGAPGIPGTR 451



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 80/165 (48%), Gaps = 30/165 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  GQ+G IG  G  G KGE+G            P G PG+ G  GP G+MG  GP
Sbjct: 301 PGLPGLKGQRGPIGLPGSPGAKGEQG------------PAGHPGEPGLTGPPGNMGPQGP 348

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +GIPG++G  GPKG+ G  G  G  G  G  G  GLDG P   G  G PG  GL G  G+
Sbjct: 349 KGIPGNQGIPGPKGETGPAGPAGHPGAKGERGSSGLDGKP---GYPGEPGTSGLKGNPGL 405

Query: 232 PGTNG---------------TNGEKGMTGPRGNRGKSGINGVPGT 261
           PG  G                 G KG+ G  G  G  G  G+PGT
Sbjct: 406 PGPKGDPGVKGPPGLPGPVGPAGAKGVPGHNGEAGPRGAPGIPGT 450



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 83/180 (46%), Gaps = 27/180 (15%)

Query: 100 QGFCNSTKEYCPPGLQGP--------IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ 151
           +GF        PPG QGP        IG+ G  GA G+ G+ G +G  GAPG+ G PG  
Sbjct: 237 RGFPGERGPAGPPGPQGPPGERGPEGIGKPGAPGAPGQPGIPGTKGHPGAPGIAGVPGAP 296

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G                 G  G+PG +G+RGP G  G PG  G  G  G PGEPGL G P
Sbjct: 297 GF----------------GKPGLPGLKGQRGPIGLPGSPGAKGEQGPAGHPGEPGLTGPP 340

Query: 212 GR---NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G     G  GIPG  G+PG  G  G  G  G  G  G RG+ G  G  G PG P     K
Sbjct: 341 GNMGPQGPKGIPGNQGIPGPKGETGPAGPAGHPGAKGERGSSGLDGKPGYPGEPGTSGLK 400



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            +G PG  G PG  G  G KG  G PG  G+ G  G  G+PGL G+ G+ G  G+PG   
Sbjct: 262 GIGKPGAPGAPGQPGIPGTKGHPGAPGIAGVPGAPGF-GKPGLPGLKGQRGPIGLPGS-- 318

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
            PG  G  G  G  GE G+TGP GN G  G  G+PG   I   K E+    P
Sbjct: 319 -PGAKGEQGPAGHPGEPGLTGPPGNMGPQGPKGIPGNQGIPGPKGETGPAGP 369


>gi|449280419|gb|EMC87737.1| Collagen alpha-2(I) chain [Columba livia]
          Length = 1363

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 82/146 (56%), Gaps = 12/146 (8%)

Query: 124  IGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            +GA G +G+ G RGE+G PG+    G PGP G+ G  G RGP G +G PGP G PG+ G+
Sbjct: 866  LGAPGILGLPGSRGERGLPGISGATGEPGPLGVAGPPGARGPSGPVGSPGPNGAPGEAGR 925

Query: 181  RGPKGDMGYPGR---IGLDGRDGLPGEPGLD---GIPGRNGM---DGIPGKDGLPGKDGI 231
             G  G+ G PGR    G  G  G PG PG     G PG +G     G PG  G PG  G+
Sbjct: 926  DGNPGNDGPPGRDGAPGFKGERGAPGSPGPSGALGAPGPHGQVGPAGKPGNRGEPGPAGV 985

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G +G+ GP+G RG+ G+ G
Sbjct: 986  VGPAGAFGPRGLAGPQGPRGEKGLPG 1011



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 86/162 (53%), Gaps = 6/162 (3%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G         P G +GP+G  G  G  G +G  G RGE   PG +G PGP+G  G
Sbjct: 445 LMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGE---PGNIGFPGPKGPTG 501

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN- 214
           + GK G +G++G  GP+G PG EG  G +G  G  G  G  G  G  G PG  G+PG + 
Sbjct: 502 EPGKPGERGNVGVAGPRGAPGPEGNNGAQGPPGVTGNQGGKGEQGPAGPPGFQGLPGPSG 561

Query: 215 --GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG+ GL G+ G+PG  G  GE+G  G  G  G +G
Sbjct: 562 PAGEAGKPGERGLHGEFGVPGPAGPRGERGPPGESGAVGPAG 603



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 80/182 (43%), Gaps = 42/182 (23%)

Query: 121 KGEIGAKGEMGVKGE------------------------RGEKGAPGVVGPPGPQGIPGD 156
           +G +G  G  G KGE                        RG  G PG  GPPGP G+ G 
Sbjct: 341 RGLVGEPGPAGAKGESGNKGEPGAAGPPGPPGPSGEEGKRGGNGEPGSAGPPGPAGLRGV 400

Query: 157 EGKRG-PKGD-----MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
            G RG P  D     MG  G +G  G  G +GP GD G PG  GL G  GLPG+PG  G 
Sbjct: 401 PGSRGLPGADGRAGVMGPAGSRGATGPAGAKGPNGDAGRPGEPGLMGPRGLPGQPGSPGP 460

Query: 211 PGRNGMDGIPGKDGL------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G+ G  G PG DG             PG  G PG  G  GE G  G RGN G +G  G 
Sbjct: 461 AGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGERGNVGVAGPRGA 520

Query: 259 PG 260
           PG
Sbjct: 521 PG 522



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 89/186 (47%), Gaps = 24/186 (12%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
             + G   S     P G +GP G  G  G  G MG +G  G+ G+PG  G  GP G PG 
Sbjct: 413 AGVMGPAGSRGATGPAGAKGPNGDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGA 472

Query: 157 EGKRGP---------KGDMGYPGPQGIPGDEGKRGPKGDM------GYPGRIGLDGRDGL 201
           +G+ GP          G++G+PGP+G  G+ GK G +G++      G PG  G +G  G 
Sbjct: 473 DGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGERGNVGVAGPRGAPGPEGNNGAQGP 532

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRGNRGK 252
           PG  G  G  G  G  G PG  GLPG  G  G  G  GE+G+          GPRG RG 
Sbjct: 533 PGVTGNQGGKGEQGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGERGP 592

Query: 253 SGINGV 258
            G +G 
Sbjct: 593 PGESGA 598



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 79/151 (52%), Gaps = 15/151 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ GP G +G  G  G  G  G+ G  G PG++   GP+G+PG  G  GP G     GP 
Sbjct: 414 GVMGPAGSRGATGPAGAKGPNGDAGRPGEPGLM---GPRGLPGQPGSPGPAGKE---GPV 467

Query: 173 GIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG +G+    GP G+ G PG IG  G  G  GEPG    PG  G  G+ G  G PG +
Sbjct: 468 GFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGK---PGERGNVGVAGPRGAPGPE 524

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G NG  G  G+TG +G +G+ G  G PG
Sbjct: 525 ---GNNGAQGPPGVTGNQGGKGEQGPAGPPG 552



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 80/167 (47%), Gaps = 30/167 (17%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEK------------------GAPGVVGPPGPQGIPGDE 157
           GP+G+ GE G  G  G  GE+G                    GAPG++G      +PG  
Sbjct: 825 GPVGRTGEQGIAGPPGFAGEKGPAGEAGAAGPPGAPGPQGILGAPGILG------LPGSR 878

Query: 158 GKRG-P--KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+RG P   G  G PGP G+ G  G RGP G +G PG  G  G  G  G PG DG PGR+
Sbjct: 879 GERGLPGISGATGEPGPLGVAGPPGARGPSGPVGSPGPNGAPGEAGRDGNPGNDGPPGRD 938

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGV 258
           G  G  G+ G PG  G  G  G  G  G  GP    GNRG+ G  GV
Sbjct: 939 GAPGFKGERGAPGSPGPSGALGAPGPHGQVGPAGKPGNRGEPGPAGV 985



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 80/170 (47%), Gaps = 6/170 (3%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G   S     P GL+G  G +G  GA G  GV G  G +GA G  G  GP G  G  G+ 
Sbjct: 384 GEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGSRGATGPAGAKGPNGDAGRPGEP 443

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G  G PG  G PG  GK GP G  G  GR+G  G  G  GEPG  G PG  G  G P
Sbjct: 444 GLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEP 503

Query: 221 GKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           GK       G+ G  G PG  G NG +G  G  GN+G  G  G  G P  
Sbjct: 504 GKPGERGNVGVAGPRGAPGPEGNNGAQGPPGVTGNQGGKGEQGPAGPPGF 553



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 82/163 (50%), Gaps = 15/163 (9%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
             + G   +T E  P G+ GP G +G    +G+ G  G  GE G  G PG  GPPG  G P
Sbjct: 882  GLPGISGATGEPGPLGVAGPPGARGPSGPVGSPGPNGAPGEAGRDGNPGNDGPPGRDGAP 941

Query: 155  GDEGKRG------PKGDMGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G +G+RG      P G +G PGP       G PG+ G+ GP G +G  G  G  G  G  
Sbjct: 942  GFKGERGAPGSPGPSGALGAPGPHGQVGPAGKPGNRGEPGPAGVVGPAGAFGPRGLAGPQ 1001

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G  G  G+PG  G  G+PG  G  G  G+PG  G +G++G  G
Sbjct: 1002 GPRGEKGLPGDKGPRGLPGLKGHNGLQGLPGLAGQHGDQGPPG 1044



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 82/169 (48%), Gaps = 9/169 (5%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   S  E   PG+ G  G+ G       +GV G  G +G  G VG PGP G PG+ G+ 
Sbjct: 873  GLPGSRGERGLPGISGATGEPGP------LGVAGPPGARGPSGPVGSPGPNGAPGEAGRD 926

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G  G+ G PG  G PG +G+RG  G  G  G +G  G  G  G  G  G  G  G  G+ 
Sbjct: 927  GNPGNDGPPGRDGAPGFKGERGAPGSPGPSGALGAPGPHGQVGPAGKPGNRGEPGPAGVV 986

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI---NGVPGTPAICA 266
            G  G  G  G+ G  G  GEKG+ G +G RG  G+   NG+ G P +  
Sbjct: 987  GPAGAFGPRGLAGPQGPRGEKGLPGDKGPRGLPGLKGHNGLQGLPGLAG 1035



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 58/101 (57%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G  GP+G  G+PG  G+PG +G RG  G  G  G+ G  G  G PG PG 
Sbjct: 146 PGKPGRPGERGVAGPQGARGFPGTPGLPGFKGIRGHNGLDGQKGQPGTPGTKGEPGAPGE 205

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           +G PG+ G  G+PG+ G  G  G  G  G++G  G TGP G
Sbjct: 206 NGTPGQPGARGLPGERGRVGAPGPAGARGSDGSAGPTGPAG 246



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 50/94 (53%), Gaps = 9/94 (9%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G+PG  G PG+ G  GP+G  G+PG  GL         PG  GI G NG+DG  G+ G P
Sbjct: 144 GHPGKPGRPGERGVAGPQGARGFPGTPGL---------PGFKGIRGHNGLDGQKGQPGTP 194

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G PG  G NG  G  G RG  G+ G  G PG
Sbjct: 195 GTKGEPGAPGENGTPGQPGARGLPGERGRVGAPG 228



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 38/66 (57%)

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GEPG  G PG  G+ G+PG  GLPG DG  G  G  G +G TGP G +G +G  G PG P
Sbjct: 384 GEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGSRGATGPAGAKGPNGDAGRPGEP 443

Query: 263 AICAYK 268
            +   +
Sbjct: 444 GLMGPR 449



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 56/121 (46%), Gaps = 18/121 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G+ G  GE GV G +G +G PG  G PG +GI G  G  G KG  G PG +G P   
Sbjct: 144 GHPGKPGRPGERGVAGPQGARGFPGTPGLPGFKGIRGHNGLDGQKGQPGTPGTKGEP--- 200

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                          G  G +G PG+PG  G+PG  G  G PG  G  G DG  G  G  
Sbjct: 201 ---------------GAPGENGTPGQPGARGLPGERGRVGAPGPAGARGSDGSAGPTGPA 245

Query: 239 G 239
           G
Sbjct: 246 G 246



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           DG  G PG PG  G+ G  G  G PG  GLPG  GI G NG +G+KG  G  G +G+ G 
Sbjct: 143 DGHPGKPGRPGERGVAGPQGARGFPGTPGLPGFKGIRGHNGLDGQKGQPGTPGTKGEPGA 202

Query: 256 ---NGVPGTPAICAYKRE 270
              NG PG P       E
Sbjct: 203 PGENGTPGQPGARGLPGE 220



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 88/249 (35%), Gaps = 105/249 (42%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP----------------------- 147
           P G  GP G  G+ GAKGE G KG +GE G  G +GP                       
Sbjct: 721 PSGFAGPPGAAGQPGAKGERGPKGPKGESGPTGAIGPIGASGPPGPAGAAGPAGPRGDAG 780

Query: 148 -PGPQGIPGDEGK------------------------RGPKGDMGYPGPQGIPGDEGKRG 182
            PG  G PG  G+                        RG +GD+   GP G  G++G  G
Sbjct: 781 PPGMTGFPGAAGRVGPPGPAGITGPPGPPGPAGKDGARGLRGDV---GPVGRTGEQGIAG 837

Query: 183 PKG------------------------DMGYPGRIGLD---GRDGLP------------- 202
           P G                         +G PG +GL    G  GLP             
Sbjct: 838 PPGFAGEKGPAGEAGAAGPPGAPGPQGILGAPGILGLPGSRGERGLPGISGATGEPGPLG 897

Query: 203 --------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
                         G PG +G PG  G DG PG DG PG+DG PG  G  G  G  GP G
Sbjct: 898 VAGPPGARGPSGPVGSPGPNGAPGEAGRDGNPGNDGPPGRDGAPGFKGERGAPGSPGPSG 957

Query: 249 NRGKSGING 257
             G  G +G
Sbjct: 958 ALGAPGPHG 966



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 83/233 (35%), Gaps = 90/233 (38%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKG------- 164
           +G  G  G  G  G  G+ GERGE G   P G  GPPG  G PG +G+RGPKG       
Sbjct: 692 RGEAGSAGPAGPAGARGIPGERGEPGPVGPSGFAGPPGAAGQPGAKGERGPKGPKGESGP 751

Query: 165 --------------------------DMGYPGPQGIPGDEGK------------------ 180
                                     D G PG  G PG  G+                  
Sbjct: 752 TGAIGPIGASGPPGPAGAAGPAGPRGDAGPPGMTGFPGAAGRVGPPGPAGITGPPGPPGP 811

Query: 181 ------RGPKGDMGYPGRIGLDGRDGLPG---------------------------EPGL 207
                 RG +GD+G  GR G  G  G PG                            PG+
Sbjct: 812 AGKDGARGLRGDVGPVGRTGEQGIAGPPGFAGEKGPAGEAGAAGPPGAPGPQGILGAPGI 871

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G  G+P   G+ G  G PG  G  G  G  GP G  G  G NG PG
Sbjct: 872 LGLPGSRGERGLP---GISGATGEPGPLGVAGPPGARGPSGPVGSPGPNGAPG 921



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 21/95 (22%)

Query: 121 KGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           +G+ GA G  G +G               +RGE G+ G  GP G +GIPG+ G+ GP G 
Sbjct: 662 RGDAGATGRDGARGLPGAIGAPGPAGGAGDRGEAGSAGPAGPAGARGIPGERGEPGPVGP 721

Query: 166 MGYPGPQGI---PGDEGKR---GPKGDMGYPGRIG 194
            G+ GP G    PG +G+R   GPKG+ G  G IG
Sbjct: 722 SGFAGPPGAAGQPGAKGERGPKGPKGESGPTGAIG 756



 Score = 40.0 bits (92), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMG 167
            P G  GP G+ G  G  G  GV G  G  G  G+ GP GP   +G+PGD+G RG  G  G
Sbjct: 964  PHGQVGPAGKPGNRGEPGPAGVVGPAGAFGPRGLAGPQGPRGEKGLPGDKGPRGLPGLKG 1023

Query: 168  YPGPQGIPGDEGKRGPKGDMGYPGRI 193
            + G QG+PG  G+    GD G PG I
Sbjct: 1024 HNGLQGLPGLAGQH---GDQGPPGNI 1046


>gi|450394|gb|AAC41772.1| alpha-1 type II collagen [Homo sapiens]
          Length = 1487

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 815 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 874

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 875 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 934

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 935 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 985

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 986 PGQRGERGFPGLPG 999



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 447 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 506

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 507 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 566

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 567 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 626

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 627 GLRGLPG 633



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 860

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 920

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 921 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 980

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 981 GIVGLPG 987



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 434

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 435 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 494

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 495 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 551

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 552 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 580



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 747

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 808 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 858

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 859 DAGAPGPQGPSGAPG 873



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 750 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 804 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 860

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 714 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 763

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 764 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 821

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 822 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 876



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 638

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 698

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 699 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 734



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 81/178 (45%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 927  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 979

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 980  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 1037

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG  G  G  GE                   G TG +G+RG++G  G
Sbjct: 1038 GSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1095



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 851  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 910

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 911  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 970

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 971  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1030

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1031 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1061



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 374 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 427

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 428 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 487

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 488 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 547

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 548 PGRPGEPGLPGAR 560



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 687 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 746

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 747 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 806

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 807 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 854



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 683 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 742

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 743 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 802

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 803 KGEVGPPGPAGSAGARGAPG 822



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 284 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 343

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 403

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 404 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 460

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 461 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 491


>gi|395506406|ref|XP_003757523.1| PREDICTED: collagen alpha-1(V) chain [Sarcophilus harrisii]
          Length = 1809

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 80/157 (50%), Gaps = 36/157 (22%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------DEGKRGPK 163
           GL+G  G+KGE    G KG+MG+KG+RGE G PG  G  GP+G  G      D G  GP 
Sbjct: 773 GLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPA 832

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G+ G  G  G+PG  G++GPKG +G+P                           G PG +
Sbjct: 833 GEKGKLGVPGLPGYPGRQGPKGSIGFP---------------------------GFPGAN 865

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G PG  G  G++G TGPRG RG  GI G PG
Sbjct: 866 GEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPG 902



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 61/120 (50%), Gaps = 24/120 (20%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------------- 173
            +GE G KGE G +G PG  GP GPQG P   GK GP G  G PGP G             
Sbjct: 1375 QGEKGAKGEAGLEGPPGKTGPIGPQGAP---GKPGPDGLRGIPGPVGEQGLPGSPGPDGP 1431

Query: 174  --------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +PG +G  GPKG+ G+PG IGL G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1432 PGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGI 1491



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 12/106 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G+ G  G  G +G  GE+G+ G P         G+PG  G++GPKG +G+P   
Sbjct: 812 GPEGPKGRGGPNGDPGPLGPAGEKGKLGVP---------GLPGYPGRQGPKGSIGFP--- 859

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           G PG  G++G +G  G PG  G  G  G  GE G  GI G+ G  G
Sbjct: 860 GFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 905



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 97/274 (35%), Gaps = 114/274 (41%)

Query: 115 QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP-------------------------- 148
           +G  G  G  G  G+ G KG+RG  G  G+ G                            
Sbjct: 580 RGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGSPGDDGERGDDGE 639

Query: 149 -GPQGIPGDEGKR------------------------GPKGDMGY------------PGP 171
            GP+G+PG+ G R                        GPKG++G             PG 
Sbjct: 640 VGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQTGPKGNVGPQGEPGPPGQQGNPGA 699

Query: 172 QGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEP----------------------- 205
           QG+PG +G  GP   KG +G PG  G+ G DG PG P                       
Sbjct: 700 QGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGY 759

Query: 206 -------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------RGK 252
                  G DGI G  G  G  G+DG PG  G  G  G  GE G  GPRG       +G+
Sbjct: 760 PGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGR 819

Query: 253 SGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
            G NG PG             L P  E  +L +P
Sbjct: 820 GGPNGDPG------------PLGPAGEKGKLGVP 841



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG IG  G  G  GE+G +G PG  GP G +G  G  G+RGP+G  G PGP
Sbjct: 847 PGRQGP---KGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 903

Query: 172 QG 173
           +G
Sbjct: 904 KG 905



 Score = 46.2 bits (108), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 27/113 (23%)

Query: 115  QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------- 155
            QG  G KGE G +G  G  G  G +GAPG  GP G +GIPG                   
Sbjct: 1375 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP 1434

Query: 156  --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                     +G  GPKG+ G+PG  G+ G  G++G KGD G PG  G  G  G
Sbjct: 1435 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1487



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G+KG++G  G  G  G +G KG+ G        G PG  G++G +G  G PGP
Sbjct: 826 PGPLGPAGEKGKLGVPGLPGYPGRQGPKGSIGFP------GFPGANGEKGGRGTPGKPGP 879

Query: 172 QGI---PGDEGKRGPKGDMGYPGRIG 194
           +G     G  G+RGP+G  G PG  G
Sbjct: 880 RGQRGPTGPRGERGPRGITGKPGPKG 905



 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 87/220 (39%), Gaps = 87/220 (39%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEK------------------------GAPGVVGPP 148
           G+ G  G KG+ G  G  G+ GE+G +                        G  G+ G P
Sbjct: 590 GMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGSPGDDGERGDDGEVGPRGLPGEP 649

Query: 149 GPQG---------------IPGDEGKRGPKGDMGY------------PGPQGIPGDEGKR 181
           GP+G               + G +G+ GPKG++G             PG QG+PG +G  
Sbjct: 650 GPRGLLGPKGPPGPPGPPGVTGMDGQTGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAI 709

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------------------ 223
           GP G+ G  G+            PGL G+PG +G  G PGK+                  
Sbjct: 710 GPPGEKGPLGK------------PGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPI 757

Query: 224 ------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                 G+ G DGI G  GT GEKG  G  G +G  GI G
Sbjct: 758 GYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKG 797


>gi|256086559|ref|XP_002579465.1| hypothetical protein [Schistosoma mansoni]
          Length = 858

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 83/157 (52%), Gaps = 15/157 (9%)

Query: 119 GQKGEIGAKGEMGVKGER------------GEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G+KG+ GA G  G KG++            GE+G  G+VGP   +G+PG  G  G  G  
Sbjct: 158 GEKGDKGASGPPGPKGDKGGVGPPGLPGQAGEEGPEGLVGPERSRGLPGAPGAPGMVGVT 217

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG  G  GD+G +GP G  G PG +G+ G  G PG  G+ G  G+ G  G  G+DG P
Sbjct: 218 GLPGIAGEKGDQGSQGPIGRRGLPGTVGVPGPAGQPGSVGVPGPVGQQGERGTQGEDGPP 277

Query: 227 GKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G+   PG  G  G KG  GPRG +G  G  G PG
Sbjct: 278 GPRGVEGSPGVQGPLGPKGQEGPRGPQGVPGDIGTPG 314



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 90/214 (42%), Gaps = 66/214 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ GP GQ G +G  G +G +GERG +G  G  GP G +G PG +G  GPKG  G  GPQ
Sbjct: 245 GVPGPAGQPGSVGVPGPVGQQGERGTQGEDGPPGPRGVEGSPGVQGPLGPKGQEGPRGPQ 304

Query: 173 GIPGD---EGKRGPKGDMG------------------YPGRIGLD--------------- 196
           G+PGD    G  GPKG++G                    G +G D               
Sbjct: 305 GVPGDIGTPGPDGPKGELGPLGIPGPQGPTGPPGPKGVQGSVGEDGPPGPQGPLGKQGLR 364

Query: 197 ------------------GRDGLPGEPGLDGIPGRNGMDGIPGKD------------GLP 226
                             GR G  G  G+ G  G  G+ G PG+             G P
Sbjct: 365 GLPGPLGPPGPPGMTGPQGRTGPQGPKGMKGETGEQGVPGEPGRTGPVGSPGPPGSLGSP 424

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G+PG  G  G+ G  G  G +GK G  G+PG
Sbjct: 425 GQQGVPGVMGKQGKTGERGSEGLQGKQGDPGIPG 458



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 88/212 (41%), Gaps = 60/212 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGK 159
           PG  GP G KGE+G  GE+G  G++G +G  G++GP            PGP G+ G  G+
Sbjct: 67  PGRPGPAGVKGELGPDGEVGPIGDKGYQGDSGIIGPIGPTGPMGARGPPGPAGVKGLTGE 126

Query: 160 RGP---------------------------------KGDMGYPGPQ-------------- 172
            GP                                 KG  G PGP+              
Sbjct: 127 DGPLGLIGSPGPRGPPGRLGPIGPLGPPGFDGEKGDKGASGPPGPKGDKGGVGPPGLPGQ 186

Query: 173 -GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G  G EG  GP+   G PG  G  G  G+ G PG+ G  G  G  G  G+ GLPG  G+
Sbjct: 187 AGEEGPEGLVGPERSRGLPGAPGAPGMVGVTGLPGIAGEKGDQGSQGPIGRRGLPGTVGV 246

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG  G  G  G+ GP G +G+ G  G  G P 
Sbjct: 247 PGPAGQPGSVGVPGPVGQQGERGTQGEDGPPG 278



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 70/137 (51%), Gaps = 18/137 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  G  G +G  G  G+ GE+G++G+ G +            G+RG  G +G PGP 
Sbjct: 203 GLPGAPGAPGMVGVTGLPGIAGEKGDQGSQGPI------------GRRGLPGTVGVPGPA 250

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG  G  GP   +G  G  G  G DG PG  G++G PG  G  G  G++G  G  G+P
Sbjct: 251 GQPGSVGVPGP---VGQQGERGTQGEDGPPGPRGVEGSPGVQGPLGPKGQEGPRGPQGVP 307

Query: 233 ---GTNGTNGEKGMTGP 246
              GT G +G KG  GP
Sbjct: 308 GDIGTPGPDGPKGELGP 324



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           GP GD   PG  G+PG +G+ GPKG  G PG +G  G  G    PG DG+PGR G  G+ 
Sbjct: 23  GPTGD---PGKDGMPGRDGQPGPKGVRGSPGVLGNQGVRGF---PGFDGMPGRPGPAGVK 76

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G+ G  G+ G  G  G  G+ G+ GP G  G  G  G PG   +     E   L
Sbjct: 77  GELGPDGEVGPIGDKGYQGDSGIIGPIGPTGPMGARGPPGPAGVKGLTGEDGPL 130



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 80/211 (37%), Gaps = 63/211 (29%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G +G  G  G  GV+G  G  G PG  GP G +G  G +G+ GP GD GY G  
Sbjct: 38  GQPGPKGVRGSPGVLGNQGVRGFPGFDGMPGRPGPAGVKGELGPDGEVGPIGDKGYQGDS 97

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGR---------------------------------D 199
           GI G  G  GP G  G PG  G+ G                                  D
Sbjct: 98  GIIGPIGPTGPMGARGPPGPAGVKGLTGEDGPLGLIGSPGPRGPPGRLGPIGPLGPPGFD 157

Query: 200 GLPGEPGLDGIPGRNG------------------------------MDGIPGKDGLPGKD 229
           G  G+ G  G PG  G                              + G PG  G+ G  
Sbjct: 158 GEKGDKGASGPPGPKGDKGGVGPPGLPGQAGEEGPEGLVGPERSRGLPGAPGAPGMVGVT 217

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+PG  G  G++G  GP G RG  G  GVPG
Sbjct: 218 GLPGIAGEKGDQGSQGPIGRRGLPGTVGVPG 248



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 70/137 (51%), Gaps = 18/137 (13%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPG---------------VVGPPGPQGIP---GDEGKRGP 162
           +G  G +G  G+KGE GE+G PG                +G PG QG+P   G +GK G 
Sbjct: 382 QGRTGPQGPKGMKGETGEQGVPGEPGRTGPVGSPGPPGSLGSPGQQGVPGVMGKQGKTGE 441

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           +G  G  G QG PG  G RGPKG  G  G +G  G  G  GE G+ G+ G  G+ G+ G+
Sbjct: 442 RGSEGLQGKQGDPGIPGDRGPKGSKGTYGPVGPLGPPGPKGEQGVPGLEGARGVVGLKGE 501

Query: 223 DGLPGKDGIPGTNGTNG 239
            G  G  G PG  G +G
Sbjct: 502 RGPVGPAGDPGQPGPSG 518



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 3/69 (4%)

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G  G PGKDG+PG+DG PG  G  G  G+ G +G RG  G +G+PG P     K E   L
Sbjct: 23  GPTGDPGKDGMPGRDGQPGPKGVRGSPGVLGNQGVRGFPGFDGMPGRPGPAGVKGE---L 79

Query: 275 LPNSETSQL 283
            P+ E   +
Sbjct: 80  GPDGEVGPI 88



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 61/136 (44%), Gaps = 33/136 (24%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGK------------------RGPKGDMGYPGRIGLD 196
           G  G +GPKG  G  G QG+PG+ G+                  +G  G MG  G+ G  
Sbjct: 383 GRTGPQGPKGMKGETGEQGVPGEPGRTGPVGSPGPPGSLGSPGQQGVPGVMGKQGKTGER 442

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPG---------------KDGLPGKDGIPGTNGTNGEK 241
           G +GL G+ G  GIPG  G  G  G               + G+PG +G  G  G  GE+
Sbjct: 443 GSEGLQGKQGDPGIPGDRGPKGSKGTYGPVGPLGPPGPKGEQGVPGLEGARGVVGLKGER 502

Query: 242 GMTGPRGNRGKSGING 257
           G  GP G+ G+ G +G
Sbjct: 503 GPVGPAGDPGQPGPSG 518



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 51/98 (52%), Gaps = 9/98 (9%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG---------DMGY 168
           +G  G+ G  G MG +G+ GE+G+ G+ G  G  GIPGD G +G KG           G 
Sbjct: 421 LGSPGQQGVPGVMGKQGKTGERGSEGLQGKQGDPGIPGDRGPKGSKGTYGPVGPLGPPGP 480

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
            G QG+PG EG RG  G  G  G +G  G  G PG  G
Sbjct: 481 KGEQGVPGLEGARGVVGLKGERGPVGPAGDPGQPGPSG 518



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 18/91 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------------------QGIP 154
           G+ G +G++G+ G +G  G++G++G+ G PG  GP G                   QG+P
Sbjct: 428 GVPGVMGKQGKTGERGSEGLQGKQGDPGIPGDRGPKGSKGTYGPVGPLGPPGPKGEQGVP 487

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           G EG RG  G  G  GP G  GD G+ GP G
Sbjct: 488 GLEGARGVVGLKGERGPVGPAGDPGQPGPSG 518


>gi|397510913|ref|XP_003825828.1| PREDICTED: collagen alpha-1(II) chain [Pan paniscus]
          Length = 1487

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 815 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 874

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 875 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 934

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 935 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 985

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 986 PGQRGERGFPGLPG 999



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 447 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 506

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 507 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 566

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 567 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 626

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 627 GLRGLPG 633



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 860

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 920

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 921 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 980

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 981 GIVGLPG 987



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 434

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 435 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 494

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 495 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 551

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 552 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 580



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 747

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 808 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 858

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 859 DAGAPGPQGPSGAPG 873



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 750 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 804 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 860

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 714 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 763

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 764 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 821

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 822 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 876



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 82/178 (46%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 927  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 979

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 980  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 1037

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG+ G  G  GE                   G TG +G+RG++G  G
Sbjct: 1038 GSPGADGPPGRDGVAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1095



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 638

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 698

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 699 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 734



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 88/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 851  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 910

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 911  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 970

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 971  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1030

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G+ G +G+RG++
Sbjct: 1031 AGEPGREGSPGADGPPGRDGVAGVKGDRGET 1061



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 374 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 427

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 428 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 487

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 488 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 547

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 548 PGRPGEPGLPGAR 560



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 687 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 746

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 747 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 806

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 807 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 854



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 683 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 742

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 743 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 802

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 803 KGEVGPPGPAGSAGARGAPG 822



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 284 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 343

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 403

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 404 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 460

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 461 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 491



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 173 GIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG  G+RGP   +G  G+PG  GL G  G  G PGLDG  G  G  G+ G+ G PG++
Sbjct: 258 GKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN 317

Query: 230 GIPGTNGTNG 239
           G PG  G  G
Sbjct: 318 GSPGPMGPRG 327



 Score = 39.7 bits (91), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 78/188 (41%), Gaps = 48/188 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P G +GP G +G  G +G +G+ G+RGE+G PG+   PGP G PG               
Sbjct: 964  PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL---PGPSGEPGK-------------- 1006

Query: 171  PQGIPG---------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------ 215
             QG PG           G  G  G  G PGR G  G DG PG  G+ G+ G  G      
Sbjct: 1007 -QGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGVAGVKGDRGETGAVG 1065

Query: 216  ---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                             G  G  G  G  G  G +G  G +G+ GP+G RG  G  G PG
Sbjct: 1066 APGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPG 1125

Query: 261  TPAICAYK 268
               +  ++
Sbjct: 1126 ERGLKGHR 1133


>gi|426372311|ref|XP_004053069.1| PREDICTED: collagen alpha-1(II) chain isoform 1 [Gorilla gorilla
           gorilla]
          Length = 1487

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 815 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 874

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 875 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 934

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 935 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 985

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 986 PGQRGERGFPGLPG 999



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 447 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 506

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 507 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 566

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 567 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 626

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 627 GLRGLPG 633



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 860

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 920

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 921 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 980

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 981 GIVGLPG 987



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 434

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 435 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 494

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 495 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 551

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 552 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 580



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 747

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 808 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 858

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 859 DAGAPGPQGPSGAPG 873



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 750 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 804 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 860

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 714 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 763

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 764 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 821

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 822 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 876



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 638

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 698

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 699 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 734



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 88/213 (41%), Gaps = 57/213 (26%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 851  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 910

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 911  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 970

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 971  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1030

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                 ++G PG +G  G  G  G +G+RG++G 
Sbjct: 1031 AGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 1063



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 374 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 427

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 428 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 487

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 488 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 547

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 548 PGRPGEPGLPGAR 560



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 687 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 746

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 747 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 806

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 807 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 854



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 83/210 (39%), Gaps = 66/210 (31%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-- 179
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G  G  
Sbjct: 927  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQRGIV 983

Query: 180  ----KRGPKGDMGYPGRIGLDGRDGLPG---------------------------EPGLD 208
                +RG +G  G PG  G  G+ G PG                            PG D
Sbjct: 984  GLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGAD 1043

Query: 209  GIPGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTN 238
            G PGR+G  G+                               G  G  G  G  G +G  
Sbjct: 1044 GPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPTGPTGKQGDRGEAGAQGPMGPSGPA 1103

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1104 GARGIQGPQGPRGDKGEAGEPGERGLKGHR 1133



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 284 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 343

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 403

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 404 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 460

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 461 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 491


>gi|402583312|gb|EJW77256.1| collagen alpha-1(IV) chain, partial [Wuchereria bancrofti]
          Length = 722

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/183 (41%), Positives = 96/183 (52%), Gaps = 18/183 (9%)

Query: 88  LNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP 147
           L     I LV   GF  +  E   PG +G +G+ G  G  G  G KG  GE G PG+   
Sbjct: 126 LRGEPGIGLVGQVGFPGAKGESGRPGYRGHVGKAGAQGKTGVAGAKGAEGENGYPGLA-- 183

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
               GIPG +G+R      G P   GIPG  G+ G  G+ G PG  GL GR+G+PG  GL
Sbjct: 184 ----GIPGKKGER------GLP---GIPGKIGRPGRAGEAGNPGIPGLKGRNGIPGRDGL 230

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            GI G  G+ G+P   GLPGK G  G  G+ GE G++G  G +G+ GI+G+PG P     
Sbjct: 231 SGIKGERGVAGLP---GLPGKVGAIGEAGSPGENGVSGYPGLKGERGIDGMPGQPGFPGM 287

Query: 268 KRE 270
             E
Sbjct: 288 SGE 290



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 94/177 (53%), Gaps = 18/177 (10%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L  M G+  +  E      QG +G+ G  G  G+ G+ G +GE G PG+ G PG QG PG
Sbjct: 409 LPGMIGYPGAKGE------QGDVGRNGGRGFDGQPGIPGVKGESGLPGLPGIPGIQGPPG 462

Query: 156 DEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            +G  G KG  G PG  G       PG++G++G  G  G PG IG  G  G+PGE GL G
Sbjct: 463 LDGMLGQKGHAGLPGKPGFDGQRGQPGEQGRKGEIGQSGSPGSIGPVGAPGVPGEVGLSG 522

Query: 210 IP------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +P      G  G+ GIPG  GL G  G  G+ G NG  G+ G RG+ G  G+ G PG
Sbjct: 523 LPGIPGDEGSAGLPGIPGIKGLRGDTGTAGSAGLNGFPGIAGARGDDGLPGLPGAPG 579



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 113/273 (41%), Gaps = 80/273 (29%)

Query: 74  KEQQNSTHNNPWVWLNAYSRIPLV----AMQGFCNSTKEYCPPGLQGPIGQKGEI----- 124
           K +Q     N     +    IP V     + G         PPGL G +GQKG       
Sbjct: 419 KGEQGDVGRNGGRGFDGQPGIPGVKGESGLPGLPGIPGIQGPPGLDGMLGQKGHAGLPGK 478

Query: 125 -------GAKGEMGVKGERGEKGAPGVVGPPGP------------QGIPGDEGK------ 159
                  G  GE G KGE G+ G+PG +GP G              GIPGDEG       
Sbjct: 479 PGFDGQRGQPGEQGRKGEIGQSGSPGSIGPVGAPGVPGEVGLSGLPGIPGDEGSAGLPGI 538

Query: 160 ------------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP---GR 192
                                    G +GD G PG  G PG  G +GP GD+GYP   G+
Sbjct: 539 PGIKGLRGDTGTAGSAGLNGFPGIAGARGDDGLPGLPGAPG-FGVQGPPGDIGYPGIDGK 597

Query: 193 IGLDG---------RDGL---PGEPGLDGIP---GRNGMDGIPGKDGLPGKDGIPGTNGT 237
           +GL G         R G+   PG PG DGIP   G  G+ GIPGK    G+DG PG  G 
Sbjct: 598 LGLPGFKGERGEEARSGVAGPPGMPGTDGIPGYRGEKGISGIPGKR---GRDGAPGLPGP 654

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+ G  G +G RG SG  G+PG   I  Y  E
Sbjct: 655 AGKDGYPGAKGERGLSGFPGIPGKDGIPGYLGE 687



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 80/219 (36%), Positives = 104/219 (47%), Gaps = 29/219 (13%)

Query: 67  EEIREREKEQQNSTHN-NPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIG 125
           E+ R+ E  Q  S  +  P         + L  + G          PG+ G  G +G+ G
Sbjct: 490 EQGRKGEIGQSGSPGSIGPVGAPGVPGEVGLSGLPGIPGDEGSAGLPGIPGIKGLRGDTG 549

Query: 126 AKGEMG------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG---PQGIPG 176
             G  G      + G RG+ G PG+ G PG        G +GP GD+GYPG     G+PG
Sbjct: 550 TAGSAGLNGFPGIAGARGDDGLPGLPGAPG-------FGVQGPPGDIGYPGIDGKLGLPG 602

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
            +G+RG +   G  G  G+ G DG+PG   E G+ GIPG+ G DG PG  G  GKDG PG
Sbjct: 603 FKGERGEEARSGVAGPPGMPGTDGIPGYRGEKGISGIPGKRGRDGAPGLPGPAGKDGYPG 662

Query: 234 TNGTN---------GEKGMTGPRGNRGKSGINGVPGTPA 263
             G           G+ G+ G  G RG SG+ GVPG P 
Sbjct: 663 AKGERGLSGFPGIPGKDGIPGYLGERGISGVPGVPGYPG 701



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/137 (48%), Positives = 78/137 (56%), Gaps = 6/137 (4%)

Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           G+QGP G  G  G  G++G+   KGERGE+   GV GPPG  G  G  G RG KG  G P
Sbjct: 581 GVQGPPGDIGYPGIDGKLGLPGFKGERGEEARSGVAGPPGMPGTDGIPGYRGEKGISGIP 640

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLP 226
           G +G  G  G  GP G  GYPG  G  G  G PG PG DGIP   G  G+ G+PG  G P
Sbjct: 641 GKRGRDGAPGLPGPAGKDGYPGAKGERGLSGFPGIPGKDGIPGYLGERGISGVPGVPGYP 700

Query: 227 GKDGIPGTNGTNGEKGM 243
           G  G+PG  G  G+KG+
Sbjct: 701 GNVGLPGLPGMPGQKGI 717



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/181 (42%), Positives = 95/181 (52%), Gaps = 13/181 (7%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +    GF   + E    GL G  G  GE G  G  G++G  G  GAPG  G PG +GI G
Sbjct: 278 MPGQPGFPGMSGERGLDGLPGLQGVDGEPGLPGVHGLEGLPGLSGAPGFAGLPGTKGIRG 337

Query: 156 DEGK---RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           + G+    GP GD+G PG QG  G  G+ G  G  G PG +G D   GLPG  G +G PG
Sbjct: 338 EPGRFAHPGPPGDVGLPGSQGSIGLPGQDGIPGTKGEPGLLG-DSHPGLPGLQGAEGEPG 396

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG---------NRGKSGINGVPGTPA 263
           R+G+DG  G  GLPG  G PG  G  G+ G  G RG          +G+SG+ G+PG P 
Sbjct: 397 RDGIDGAVGFPGLPGMIGYPGAKGEQGDVGRNGGRGFDGQPGIPGVKGESGLPGLPGIPG 456

Query: 264 I 264
           I
Sbjct: 457 I 457



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 104/212 (49%), Gaps = 27/212 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQ 151
            + G      E   PG+ G IG+ G  G  G  G+ G +G  G PG      + G  G  
Sbjct: 181 GLAGIPGKKGERGLPGIPGKIGRPGRAGEAGNPGIPGLKGRNGIPGRDGLSGIKGERGVA 240

Query: 152 GIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEP 205
           G+PG  GK G  G+ G PG  G+   PG +G+RG     G  G+PG  G  G DGLPG  
Sbjct: 241 GLPGLPGKVGAIGEAGSPGENGVSGYPGLKGERGIDGMPGQPGFPGMSGERGLDGLPGLQ 300

Query: 206 GLDG---IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------------GMTGPRGNR 250
           G+DG   +PG +G++G+PG  G PG  G+PGT G  GE             G+ G +G+ 
Sbjct: 301 GVDGEPGLPGVHGLEGLPGLSGAPGFAGLPGTKGIRGEPGRFAHPGPPGDVGLPGSQGSI 360

Query: 251 GKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
           G  G +G+PGT        +S   LP  + ++
Sbjct: 361 GLPGQDGIPGTKGEPGLLGDSHPGLPGLQGAE 392



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 94/202 (46%), Gaps = 32/202 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G IG  G  G +G++G  G RG  G PG         IPG +G+ G  G  G PG 
Sbjct: 407 PGLPGMIGYPGAKGEQGDVGRNGGRGFDGQPG---------IPGVKGESGLPGLPGIPGI 457

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------------------GLDGIPGR 213
           QG PG +G  G KG  G PG+ G DG+ G PGE                   G  G+PG 
Sbjct: 458 QGPPGLDGMLGQKGHAGLPGKPGFDGQRGQPGEQGRKGEIGQSGSPGSIGPVGAPGVPGE 517

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
            G+ G+P   G+PG +G  G  G  G KG+ G  G  G +G+NG PG     A   +   
Sbjct: 518 VGLSGLP---GIPGDEGSAGLPGIPGIKGLRGDTGTAGSAGLNGFPGI--AGARGDDGLP 572

Query: 274 LLPNSETSQLLIPPTIVGSEHI 295
            LP +    +  PP  +G   I
Sbjct: 573 GLPGAPGFGVQGPPGDIGYPGI 594



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 14/163 (8%)

Query: 110 CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-----PGPQGIPGDEGKRGPKG 164
            PPG  G  G +G IG  G+ G+ G +GE   PG++G      PG QG  G+ G+ G  G
Sbjct: 346 GPPGDVGLPGSQGSIGLPGQDGIPGTKGE---PGLLGDSHPGLPGLQGAEGEPGRDGIDG 402

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPG 221
            +G+PG  G+ G  G +G +GD+G  G  G DG+ G+P   GE GL G+PG  G+ G PG
Sbjct: 403 AVGFPGLPGMIGYPGAKGEQGDVGRNGGRGFDGQPGIPGVKGESGLPGLPGIPGIQGPPG 462

Query: 222 KDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            DG+ G+    G+PG  G +G++G  G +G +G+ G +G PG+
Sbjct: 463 LDGMLGQKGHAGLPGKPGFDGQRGQPGEQGRKGEIGQSGSPGS 505



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 97  VAMQGFCNSTKEYC------PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
           + + GF     E        PPG+ G  G  G  G KG  G+ G+RG  GAPG+ GP G 
Sbjct: 598 LGLPGFKGERGEEARSGVAGPPGMPGTDGIPGYRGEKGISGIPGKRGRDGAPGLPGPAGK 657

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK---GDMGYPGRIGLDGRDGLPGEPGL 207
            G PG +G+RG  G  G PG  GIPG  G+RG     G  GYPG +GL G  G+PG+ G+
Sbjct: 658 DGYPGAKGERGLSGFPGIPGKDGIPGYLGERGISGVPGVPGYPGNVGLPGLPGMPGQKGI 717



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 94/205 (45%), Gaps = 44/205 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV------KGERGEKGAPG------------VVGPPGPQGI 153
           PGL G +G  GE G+ GE GV      KGERG  G PG            + G PG QG+
Sbjct: 243 PGLPGKVGAIGEAGSPGENGVSGYPGLKGERGIDGMPGQPGFPGMSGERGLDGLPGLQGV 302

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDGI 210
            G+ G  G  G  G PG  G PG  G  G KG  G PGR    G  G  GLPG  G  G+
Sbjct: 303 DGEPGLPGVHGLEGLPGLSGAPGFAGLPGTKGIRGEPGRFAHPGPPGDVGLPGSQGSIGL 362

Query: 211 PGRNGMDGIPGKDGL-----------------PGKDGI------PGTNGTNGEKGMTGPR 247
           PG++G+ G  G+ GL                 PG+DGI      PG  G  G  G  G +
Sbjct: 363 PGQDGIPGTKGEPGLLGDSHPGLPGLQGAEGEPGRDGIDGAVGFPGLPGMIGYPGAKGEQ 422

Query: 248 GNRGKSGINGVPGTPAICAYKRESC 272
           G+ G++G  G  G P I   K ES 
Sbjct: 423 GDVGRNGGRGFDGQPGIPGVKGESG 447



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 39/66 (59%)

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG +G RG  G  G PG  GLDG  G  GEPG+ G PG+ G  GIPG  GL G DG P
Sbjct: 44  GAPGLKGMRGSDGLPGLPGSRGLDGLPGRIGEPGIVGYPGKPGQSGIPGLPGLLGDDGYP 103

Query: 233 GTNGTN 238
           G  G +
Sbjct: 104 GIPGES 109



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 74/159 (46%), Gaps = 26/159 (16%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G  G+KG RG  G PG+   PG +G+ G  G+ G  G +GYPG  G  G  G  G  GD 
Sbjct: 44  GAPGLKGMRGSDGLPGL---PGSRGLDGLPGRIGEPGIVGYPGKPGQSGIPGLPGLLGDD 100

Query: 188 GYPGRIG------------LDGRDGLPGEPGLD-----GIPGRNGMDGIP------GKDG 224
           GYPG  G            L G  GL GEPG+      G PG  G  G P      GK G
Sbjct: 101 GYPGIPGESGLPGAGGLPGLSGLSGLRGEPGIGLVGQVGFPGAKGESGRPGYRGHVGKAG 160

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             GK G+ G  G  GE G  G  G  GK G  G+PG P 
Sbjct: 161 AQGKTGVAGAKGAEGENGYPGLAGIPGKKGERGLPGIPG 199


>gi|114645047|ref|XP_509026.2| PREDICTED: collagen alpha-1(II) chain isoform 6 [Pan troglodytes]
          Length = 1487

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 815 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 874

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 875 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 934

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 935 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 985

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 986 PGQRGERGFPGLPG 999



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 447 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 506

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 507 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 566

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 567 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 626

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 627 GLRGLPG 633



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 860

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 920

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 921 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 980

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 981 GIVGLPG 987



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 434

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 435 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 494

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 495 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 551

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 552 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 580



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 747

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 808 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 858

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 859 DAGAPGPQGPSGAPG 873



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 750 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 804 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 860

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 714 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 763

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 764 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 821

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 822 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 876



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 638

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 698

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 699 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 734



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 81/178 (45%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 927  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 979

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 980  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 1037

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG  G  G  GE                   G TG +G+RG++G  G
Sbjct: 1038 GSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1095



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 851  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 910

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  G+ G  GP G PG++G+    GP G  G 
Sbjct: 911  NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 970

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 971  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1030

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1031 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1061



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 374 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 427

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 428 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 487

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 488 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 547

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 548 PGRPGEPGLPGAR 560



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 687 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 746

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 747 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 806

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 807 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 854



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 683 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 742

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 743 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 802

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 803 KGEVGPPGPAGSAGARGAPG 822



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 284 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 343

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 403

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 404 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 460

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 461 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 491


>gi|392347134|ref|XP_003749738.1| PREDICTED: collagen alpha-2(I) chain-like isoform 1 [Rattus
           norvegicus]
          Length = 1372

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 90/178 (50%), Gaps = 21/178 (11%)

Query: 112 PGLQGPIGQKGEIGAKG------------EMGVKGERGEKGAPGVVGPPG---PQGIPGD 156
           PG  GP G +GE G  G              G+ G +G  G PGV G PG   P+GIPG 
Sbjct: 279 PGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGP 338

Query: 157 ---EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGI 210
               G  GP+G +G PGP G  G+ G +G  G  G    PG  G +G+ G PGEPG  G 
Sbjct: 339 VGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGP 398

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G+ G PG  GLPG DG  G  G  G +G TGP G RG +G  G PG P +   +
Sbjct: 399 AGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGPR 456



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 92/209 (44%), Gaps = 36/209 (17%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG------EMGVKGERGEKGAPGVVGPPG 149
              + G   +     P G+ GP+G  G  G +G        G KGE G KG PG  G  G
Sbjct: 317 ATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQG 376

Query: 150 PQGIPGDEGKR------------GPKGDMGYPGPQGIPGDEGK----------------- 180
           P G  G+EGKR            GP G  G PG +G+PG +G+                 
Sbjct: 377 PPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAG 436

Query: 181 -RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            RGP GD G PG  GL G  GLPG PG  G  G+ G  G+PG DG PG  G  G  G  G
Sbjct: 437 VRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAG 496

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  GP+G  G  G  G  G P +   +
Sbjct: 497 NIGFPGPKGPSGDPGKPGEKGHPGLAGAR 525



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 80/148 (54%), Gaps = 15/148 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G  G +GA G  G +G  GE G PG  GP G +G  G  GK    G+ G+PG  
Sbjct: 100 GLMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGK---AGEDGHPGKP 156

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKD 229
           G PG+ G  GP+G  G+PG  GL         PG  GI G NG+DG+   PG  G+ G+ 
Sbjct: 157 GRPGERGVVGPQGARGFPGTPGL---------PGFKGIRGHNGLDGLKGQPGAQGVKGEP 207

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G PG NGT G+ G  G  G RG+ G  G
Sbjct: 208 GAPGENGTPGQAGARGLPGERGRVGAPG 235



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 82/160 (51%), Gaps = 15/160 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G  GE G +G  G  G  G  G PG+ G PG +G+PG +G+    G MG PG +
Sbjct: 373 GAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGR---AGVMGPPGNR 429

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------LDGIPGRNGMDGIP 220
           G  G  G RGP GD G PG  GL G  GLPG PG            L GI GR G  G  
Sbjct: 430 GSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPA 489

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G PG  G +G+ G  G +G+ G +G  G PG
Sbjct: 490 GPRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPG 529



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 88/174 (50%), Gaps = 12/174 (6%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G   S     P G +GP+G  G  G  G +G  G RGE G    +G PGP+G  G
Sbjct: 452 LMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAG---NIGFPGPKGPSG 508

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D GK G KG  G  G +G PG +G  G +G  G  G  G  G  G  G PG  G+PG +G
Sbjct: 509 DPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSG 568

Query: 216 MDG---IPGKDGLPGKDGIPGTNGTNGEK------GMTGPRGNRGKSGINGVPG 260
             G    PG+ GLPG+ G+PG  G  GE+      G  GP G  G  G +G PG
Sbjct: 569 TAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGSRGPSGAPG 622



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 80/153 (52%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G   +     P G QGP G+ GE G  G  G +G  G  G  G  G PG  G PG
Sbjct: 101 LMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKPGRPG 160

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           + G  GP+G  G+PG  G+PG +G RG  G  G  G+ G  G  G PG PG +G PG+ G
Sbjct: 161 ERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGENGTPGQAG 220

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+PG+ G  G  G  G  G++G  G  GP G
Sbjct: 221 ARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG 253



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 78/149 (52%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ GP G +G  G  G  G  G+ G  G PG++GP G  G PG+ G  G +G +G PG  
Sbjct: 421 GVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGID 480

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG  G  GP+G+ G  G  G  G  G PG+PG  G PG  G  G PG DG  G  G P
Sbjct: 481 GRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPP 540

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G KG  GP G  G  G+ G  GT
Sbjct: 541 GPQGVQGGKGEQGPAGPPGFQGLPGPSGT 569



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 85/172 (49%), Gaps = 36/172 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP+G+ GEIGA G  G  GE+G  G PG  GPPG           GP+G +G PG  
Sbjct: 829 GDQGPVGRTGEIGASGPPGFAGEKGPSGEPGTTGPPG---------TAGPQGLLGAPGIL 879

Query: 173 GIPGDEGKRG-P--KGDMGYPGRIGLD---------------GRDGLPGE------PGLD 208
           G+PG  G+RG P   G +G PG +G+                G +G PGE      PG D
Sbjct: 880 GLPGSRGERGLPGIAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSD 939

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGING 257
           G PGR+G  G  G+ G PG  G  G  G  G  G  GP    GNRG+ G  G
Sbjct: 940 GPPGRDGQPGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAG 991



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 72/135 (53%), Gaps = 12/135 (8%)

Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGP---KGDMGYPGRI 193
           GV   PGP G+    G RGP G +G PGPQG       PG+ G+ GP   +G  G PG+ 
Sbjct: 91  GVSAGPGPMGL---MGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKA 147

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G DG  G PG PG  G+ G  G  G PG  GLPG  GI G NG +G KG  G +G +G+ 
Sbjct: 148 GEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEP 207

Query: 254 GINGVPGTPAICAYK 268
           G  G  GTP     +
Sbjct: 208 GAPGENGTPGQAGAR 222



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 96/200 (48%), Gaps = 30/200 (15%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGP----- 162
           P G++GP    G+ G  GE G+ G RG  G+PG VGP G   P G+PG +G+ GP     
Sbjct: 434 PAGVRGP---NGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAG 490

Query: 163 ----KGDMGYPGPQGIPGDEGKRGPKGD------MGYPGRIGLDGRDGLPGEPGLDGIPG 212
                G++G+PGP+G  GD GK G KG        G PG  G +G  G PG  G+ G  G
Sbjct: 491 PRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKG 550

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRGNRGKSGINGVPGTPA 263
             G  G PG  GLPG  G  G  G  GE+G+          GPRG RG  G +G  G   
Sbjct: 551 EQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSG 610

Query: 264 ICAYKRESCSLLPNSETSQL 283
               +  S +  P+    + 
Sbjct: 611 PIGSRGPSGAPGPDGNKGEA 630



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 85/181 (46%), Gaps = 24/181 (13%)

Query: 98  AMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            +QG         PPG QG   P G  GE+G  GE G+ GE G    PG  GP G +G P
Sbjct: 544 GVQGGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFG---LPGPAGPRGERGPP 600

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---- 210
           G+ G  GP G +G  GP G PG +G +G  G +G PG  G  G  GLPGE G  GI    
Sbjct: 601 GESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGK 660

Query: 211 --------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                         PGR+G  G PG  G PG  G  G  G  G  G +GP G RG  G  
Sbjct: 661 GEKGETGLRGEIGNPGRDGARGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGER 720

Query: 257 G 257
           G
Sbjct: 721 G 721



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/152 (44%), Positives = 77/152 (50%), Gaps = 3/152 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG---DMGY 168
            PG  G  G  G  G  G  G  G +GE+G PG +GP G  G PG  G  GP G   + G 
Sbjct: 927  PGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGE 986

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PGP G  G  G  GP+G  G  G  G  G  G  G  GL G+ G NG+ G+PG  GL G 
Sbjct: 987  PGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDKGARGLPGLKGHNGLQGLPGLAGLHGD 1046

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG  G  G +G  GP G  GK G +G PG
Sbjct: 1047 QGAPGPVGPAGPRGPAGPSGPIGKDGRSGHPG 1078



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 74/143 (51%), Gaps = 9/143 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G  G+ G  GE G  G  G +GAPG  G  G QG PG +G +G KG+    GP 
Sbjct: 499 GFPGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQ---GPA 555

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG +G  GP G     G +G  G  GLPGE GL G  G  G  G PG+ G  G     
Sbjct: 556 GPPGFQGLPGPSGTA---GEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPS--- 609

Query: 233 GTNGTNGEKGMTGPRGNRGKSGI 255
           G  G+ G  G  GP GN+G++G 
Sbjct: 610 GPIGSRGPSGAPGPDGNKGEAGA 632



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 52/90 (57%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           +GE+G  G  G +GAPG +G PGP G  GD G+ G  G  G  GP+G PG+ G+ GP G 
Sbjct: 669 RGEIGNPGRDGARGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGP 728

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G+ G  G  G+ G  GE G  G  G NG+
Sbjct: 729 NGFAGPAGSAGQPGAKGEKGTKGPKGENGI 758



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 81/186 (43%), Gaps = 41/186 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG QG    KGE GA GE G  G+ G +G PG    VG PGP G  G +G  GP G  G 
Sbjct: 198 PGAQG---VKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG- 253

Query: 169 P-------------------GPQGIPGDEGKRGPKGDMGYPGR---------------IG 194
           P                   GP G PG  G  GP+G+ G PG                 G
Sbjct: 254 PIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTG 313

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  GLPG  G  G+PG  G+ G  G  G  G  G+ G  G  G KG TG +G  G +G
Sbjct: 314 AKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAG 373

Query: 255 INGVPG 260
             G PG
Sbjct: 374 AQGPPG 379



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 49/89 (55%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G IGA G  G  G+RGE GA G  GP GP+G PG+ G+ GP G  G+ GP
Sbjct: 675 PGRDGARGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGP 734

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            G  G  G +G KG  G  G  G+ G  G
Sbjct: 735 AGSAGQPGAKGEKGTKGPKGENGIVGPTG 763



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 91/244 (37%), Gaps = 99/244 (40%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG--AP----------------------GVVGPP 148
           G  GP G  G+ GAKGE G KG +GE G   P                      G  GPP
Sbjct: 730 GFAGPAGSAGQPGAKGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPP 789

Query: 149 GPQGIPG------------------------DEGKRGPKGD---------MGYPGPQGIP 175
           G  G PG                         EG RGP+GD         +G  GP G  
Sbjct: 790 GMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGEIGASGPPGFA 849

Query: 176 GDEGKR------------GPKGDMGYPGRIGLD---GRDGLP------------------ 202
           G++G              GP+G +G PG +GL    G  GLP                  
Sbjct: 850 GEKGPSGEPGTTGPPGTAGPQGLLGAPGILGLPGSRGERGLPGIAGALGEPGPLGIAGPP 909

Query: 203 ---------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                    G PG++G PG  G DG PG DG PG+DG PG  G  G  G  GP G  G  
Sbjct: 910 GARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGNIGPTGAAGAP 969

Query: 254 GING 257
           G +G
Sbjct: 970 GPHG 973



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 60/122 (49%), Gaps = 18/122 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG  G +G  G+ G +GE G  G  G  GA G  GP GPQGI GD+G+ G KG  G PG 
Sbjct: 969  PGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDKGARGLPGL 1028

Query: 171  ---------P--------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                     P        QG PG  G  GP+G  G  G IG DGR G PG  G  G+ G 
Sbjct: 1029 KGHNGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAGPSGPIGKDGRSGHPGPVGPAGVRGS 1088

Query: 214  NG 215
             G
Sbjct: 1089 QG 1090



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 83/198 (41%), Gaps = 54/198 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
           PG +G  G  G  G KG+ G +G +GE GAPG        G PG  G R   G +G +G 
Sbjct: 180 PGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGE------NGTPGQAGARGLPGERGRVGA 233

Query: 169 PGPQGI---------------------------------------PGDEGKRGPKGDMGY 189
           PGP G                                        PG  G  GP+G+ G 
Sbjct: 234 PGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGL 293

Query: 190 PG------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           PG        G  G +GL G  G  G+PG  G  G+PG  G+PG  G  G  G  G  G 
Sbjct: 294 PGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGE 353

Query: 244 TGPRGNRGKSGINGVPGT 261
            GP G++G++G  G PG+
Sbjct: 354 PGPAGSKGETGNKGEPGS 371



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 74/169 (43%), Gaps = 36/169 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAP---GVVGPPGPQGI------------PGDE 157
           G  GP G  G  G+ G+ G KGE+G KG     G+VGP GP G              G  
Sbjct: 724 GPAGPNGFAGPAGSAGQPGAKGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSR 783

Query: 158 GKRGPKGDMGYPGPQG------------------IPGDEGKRGPKGDMGYPGR---IGLD 196
           G  GP G  G+PG  G                    G EG RGP+GD G  GR   IG  
Sbjct: 784 GDGGPPGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGEIGAS 843

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           G  G  GE G  G PG  G  G  G  GL G  GI G  G+ GE+G+ G
Sbjct: 844 GPPGFAGEKGPSGEPGTTGPPGTAGPQGLLGAPGILGLPGSRGERGLPG 892



 Score = 43.1 bits (100), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 74/186 (39%), Gaps = 51/186 (27%)

Query: 108 EYCPPGLQGPIGQK---GEIGAKGEMGVKGERGEKGAPGVVGP----------------- 147
           E+  PG  GP G++   GE GA G  G  G RG  GAPG  G                  
Sbjct: 584 EFGLPGPAGPRGERGPPGESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPGSAGASG 643

Query: 148 ----PGPQGI---------------------PGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
               PG +G                      PG +G RG  G +G PGP G  GD     
Sbjct: 644 PGGLPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAIGAPGPAGASGD----- 698

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            +G+ G  G  G  G  G PGE G  G  G NG  G  G  G PG  G  GT G  GE G
Sbjct: 699 -RGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGSAGQPGAKGEKGTKGPKGENG 757

Query: 243 MTGPRG 248
           + GP G
Sbjct: 758 IVGPTG 763


>gi|440910626|gb|ELR60401.1| Collagen alpha-4(IV) chain, partial [Bos grunniens mutus]
          Length = 1652

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/177 (44%), Positives = 96/177 (54%), Gaps = 9/177 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
           PGLQGP G++G  G  G  G  G   E+GAPG+ G PG  G PG  G    +G +GDMG 
Sbjct: 764 PGLQGPKGREGNAGFPGIPGPPGHSCERGAPGIPGQPGLPGAPGSPGAPGWKGQRGDMGP 823

Query: 169 PGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            GP   +G+PG  G  G  G  G PG  G  G DGLPG PG  G  G  G  G PG+ G 
Sbjct: 824 LGPAGMKGLPGVPGWPGADGTPGLPGVPGPTGDDGLPGLPGPKGPQGLPGFLGFPGERGK 883

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
           PG+DG PG  G +GEKG  G  G+RG  G+ G  G P    Y+ E+  +    ET +
Sbjct: 884 PGQDGHPGRKGEHGEKGWPGFLGDRGLKGVKGARGPP---GYEGETDIISKKGETGE 937



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 84/170 (49%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGY 168
           PG  G  G  G  G +G+MG  G  G KG PGV G PG  G PG  G  GP GD    G 
Sbjct: 803 PGAPGSPGAPGWKGQRGDMGPLGPAGMKGLPGVPGWPGADGTPGLPGVPGPTGDDGLPGL 862

Query: 169 PGP---QGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-- 220
           PGP   QG+P   G  G+RG  G  G+PGR G  G  G PG  G  G+ G  G  G P  
Sbjct: 863 PGPKGPQGLPGFLGFPGERGKPGQDGHPGRKGEHGEKGWPGFLGDRGLKGVKGARGPPGY 922

Query: 221 ----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                     G+ G PG  G  G  G NG+KG  G +G RG+ G +G PG
Sbjct: 923 EGETDIISKKGETGEPGPSGDGGFPGENGDKGHPGMQGRRGEPGSHGPPG 972



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 82/184 (44%), Gaps = 43/184 (23%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG----- 152
             + GF     E   PG  G  G+KGE G KG  G  G+RG KG  G  GPPG +G     
Sbjct: 870  GLPGFLGFPGERGKPGQDGHPGRKGEHGEKGWPGFLGDRGLKGVKGARGPPGYEGETDII 929

Query: 153  -IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-GI 210
               G+ G+ GP GD G+PG              GD G+PG  G  G  G  G PG   G 
Sbjct: 930  SKKGETGEPGPSGDGGFPGEN------------GDKGHPGMQGRRGEPGSHGPPGFHPGE 977

Query: 211  PGRN---------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PGRN                     G  G PG  G PG  G PG +G +G +   GP+G+
Sbjct: 978  PGRNGQPGLPGPPGPPGSPGLRGNIGFPGFPGDQGEPGSPGCPGPSGMDGTR---GPKGD 1034

Query: 250  RGKS 253
            +G+S
Sbjct: 1035 KGES 1038


>gi|397476412|ref|XP_003809597.1| PREDICTED: collagen alpha-1(IX) chain isoform 2 [Pan paniscus]
          Length = 678

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 106/208 (50%), Gaps = 48/208 (23%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKG---------ERGEKG 140
           L  M+G   +  E   PG QG  G++G      E+GA+G  G +G         ++GEKG
Sbjct: 182 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEFGEVGAQGPPGAQGLRGITGIVGDKGEKG 241

Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+RGP      KGD G  G +GIPG  G    KGD G PG
Sbjct: 242 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGS---KGDTGLPG 298

Query: 192 RIGLDGRDGLPGEP------------------GLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
              +DGRDG+PG P                  GL G+PG  G  G+ G+ G  G  G PG
Sbjct: 299 ---VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSAGAPGKPG 355

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G +G+ G  GP G  G  G  G+PG+
Sbjct: 356 QMGNSGKPGQQGPPGEVGPRGPRGLPGS 383



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA         +GIPG  G    KGD G
Sbjct: 248 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGA---------RGIPGLPGS---KGDTG 295

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 296 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSAGAPGKPG 355

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 356 QMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGSPGLPG 397



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGEFGEVGAQGPPGAQGLRGITGIV 234

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 235 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 289



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 72/134 (53%), Gaps = 6/134 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  GD G  
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEFGEVGAQGPPGAQGLRGITGIVGDKGEK 240

Query: 191 GRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  GLDG     GLPG PG  G  G  G  G  G  G  G  GIPG  G+ G+ G+    
Sbjct: 241 GARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGSKGDTGLP--- 297

Query: 248 GNRGKSGINGVPGT 261
           G  G+ GI G+PGT
Sbjct: 298 GVDGRDGIPGMPGT 311



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GP+
Sbjct: 325 GLQGLPGVPGIPGAKG---VAGEKGSAGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPR 378

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PG+
Sbjct: 379 GLPGSRGELGPVGSPGLPGK 398


>gi|449498112|ref|XP_002191711.2| PREDICTED: collagen alpha-1(XIX) chain [Taeniopygia guttata]
          Length = 1050

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 76/136 (55%), Gaps = 21/136 (15%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKG---------DMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G PG +G PG +G+PG++G RGP G           G PG  G+PG+ G+RGP GD+G+P
Sbjct: 753 GDPGPMGLPGLEGLPGEKGDRGPAGAPGVSGTPGKPGSPGSPGLPGEPGERGPIGDIGFP 812

Query: 191 G------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G      + G++G+DGLPG PG  G PG        G  G  G  GIPG  G  GE+G  
Sbjct: 813 GPEGPQGKPGVNGKDGLPGPPGAVGRPGDR------GPKGERGDQGIPGDRGPQGERGKP 866

Query: 245 GPRGNRGKSGINGVPG 260
           GP G +G  G  G PG
Sbjct: 867 GPSGEKGDVGPVGPPG 882



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 83/160 (51%), Gaps = 23/160 (14%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           QKG+IG KGE+GV G +GEKG P V G  G  G  G EG +G KG+MG PGP G+ G+ G
Sbjct: 406 QKGDIGQKGELGVTGAKGEKGEPSVKGDKGDPGETGLEGSKGNKGEMGDPGPPGLIGNPG 465

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD-------------------GIP 220
            +G +G  G  G  GL G  GLPG+PG+ G PG  G                     G P
Sbjct: 466 SKGLQGPPGPVGPRGLPGEVGLPGDPGVPGNPGIKGDKGDPGGIMGPPGHPGPKGDMGPP 525

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G    P   G PG  G  G  G  GP+G RG  G+ G PG
Sbjct: 526 G----PSLPGTPGPTGVPGNPGPRGPKGERGLPGVQGAPG 561



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 48/75 (64%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KGD G  GP GIPG EG +G KG+ G+PG +G  G +GL G PGL GI G +G  G+PG+
Sbjct: 624 KGDPGTRGPPGIPGREGPKGSKGERGFPGLVGEKGDEGLQGAPGLPGISGPSGPSGVPGR 683

Query: 223 DGLPGKDGIPGTNGT 237
            G PG  G  G  G+
Sbjct: 684 PGHPGPAGAKGEKGS 698



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 97/257 (37%), Gaps = 91/257 (35%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------- 153
           G   +  E   P ++G  G  GE G +G  G KGE G+ G PG++G PG +G+       
Sbjct: 417 GVTGAKGEKGEPSVKGDKGDPGETGLEGSKGNKGEMGDPGPPGLIGNPGSKGLQGPPGPV 476

Query: 154 --------------PGDEGKRGPKGDM---------------------------GYPGPQ 172
                         PG  G  G KGD                            G PGP 
Sbjct: 477 GPRGLPGEVGLPGDPGVPGNPGIKGDKGDPGGIMGPPGHPGPKGDMGPPGPSLPGTPGPT 536

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG--------------------EPGLDGIPG 212
           G+PG+ G RGPKG+ G PG  G  G  G PG                     PG++G PG
Sbjct: 537 GVPGNPGPRGPKGERGLPGVQGAPGEMGPPGIGIQGSPGPRGPPGLPGAPGTPGINGSPG 596

Query: 213 RNG-----------------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           R+G                       + G PG  G PG  G  G  G+ GE+G  G  G 
Sbjct: 597 RDGKPGLPGPPGDPVALPLVGDMGAILKGDPGTRGPPGIPGREGPKGSKGERGFPGLVGE 656

Query: 250 RGKSGINGVPGTPAICA 266
           +G  G+ G PG P I  
Sbjct: 657 KGDEGLQGAPGLPGISG 673



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 71/173 (41%), Gaps = 40/173 (23%)

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------------------ 182
            P + G PGP G+PG+ G RGPKG+ G PG QG PG+ G  G                  
Sbjct: 526 GPSLPGTPGPTGVPGNPGPRGPKGERGLPGVQGAPGEMGPPGIGIQGSPGPRGPPGLPGA 585

Query: 183 --PKGDMGYPGR------------------IGLDGR--DGLPGEPGLDGIPGRNGMDGIP 220
               G  G PGR                  +G  G    G PG  G  GIPGR G  G  
Sbjct: 586 PGTPGINGSPGRDGKPGLPGPPGDPVALPLVGDMGAILKGDPGTRGPPGIPGREGPKGSK 645

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           G+ G PG  G  G  G  G  G+ G  G  G SG+ G PG P     K E  S
Sbjct: 646 GERGFPGLVGEKGDEGLQGAPGLPGISGPSGPSGVPGRPGHPGPAGAKGEKGS 698



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 24/130 (18%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG--DEGKRGPKGDMGYPGRIG 194
           GE G PGV G      +PG +G++G KG+MG  GP G+ G   E K G + +  + G   
Sbjct: 240 GEAGLPGVAG------LPGHKGEKGEKGEMGVKGPDGVAGLPGEKKNGEQAEKMFKGICN 293

Query: 195 LD------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG-MTGPR 247
           ++      G  G  GEPG +G+PG  G+ G PG          PG +G  GEKG + GP+
Sbjct: 294 IEELNYQLGEKGDKGEPGPEGLPGTEGLKGDPGS---------PGADGPKGEKGLLEGPQ 344

Query: 248 GNRGKSGING 257
           G  GK G  G
Sbjct: 345 GPPGKEGQRG 354



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 70/140 (50%), Gaps = 29/140 (20%)

Query: 102 FCNS---TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE- 157
           +CNS   T++ C   +   +G+ G  G  G  G KGE+GEKG  GV GP G  G+PG++ 
Sbjct: 221 YCNSQLATEDRCCE-ISADLGEAGLPGVAGLPGHKGEKGEKGEMGVKGPDGVAGLPGEKK 279

Query: 158 -GKR------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            G++                  G KGD G PGP+G+PG EG    KGD G PG  G  G 
Sbjct: 280 NGEQAEKMFKGICNIEELNYQLGEKGDKGEPGPEGLPGTEGL---KGDPGSPGADGPKGE 336

Query: 199 DGLPGEPGLDGIPGRNGMDG 218
            GL    G  G PG+ G  G
Sbjct: 337 KGL--LEGPQGPPGKEGQRG 354



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 83/225 (36%), Gaps = 93/225 (41%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-------------------------- 145
           PG+ G  G KGE G KGEMGVKG  G  G PG                            
Sbjct: 245 PGVAGLPGHKGEKGEKGEMGVKGPDGVAGLPGEKKNGEQAEKMFKGICNIEELNYQLGEK 304

Query: 146 ---GPPGPQGIPGDEGKR---------GPKGDMG-YPGPQGIPGDEGKRGPK-------- 184
              G PGP+G+PG EG +         GPKG+ G   GPQG PG EG+RG +        
Sbjct: 305 GDKGEPGPEGLPGTEGLKGDPGSPGADGPKGEKGLLEGPQGPPGKEGQRGRRGKPGLPGK 364

Query: 185 -------------------------------------------GDMGYPGRIGLDGRDGL 201
                                                      GD+G  G +G+ G  G 
Sbjct: 365 PGPPGPPGPSGLKGILDSLNKHYNESDARLLGELGTLGLKGQKGDIGQKGELGVTGAKGE 424

Query: 202 PGEP---GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            GEP   G  G PG  G++G  G  G  G  G PG  G  G KG+
Sbjct: 425 KGEPSVKGDKGDPGETGLEGSKGNKGEMGDPGPPGLIGNPGSKGL 469



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 68/178 (38%), Gaps = 65/178 (36%)

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
           KG PG  GPPG   IPG EG +G KG+ G+PG  G  GDEG +G  G  G  G  G  G 
Sbjct: 624 KGDPGTRGPPG---IPGREGPKGSKGERGFPGLVGEKGDEGLQGAPGLPGISGPSGPSGV 680

Query: 199 DGLPGEPGLDGIPG-----------------------RNGMD------------------ 217
            G PG PG  G  G                       RNGM                   
Sbjct: 681 PGRPGHPGPAGAKGEKGSEGSPGKPGPPGPPGMPYNERNGMSSLYKLQGGVSVASYPGPP 740

Query: 218 ------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                       G PG  GLPG +G+PG  G          RG  G  G++G PG P 
Sbjct: 741 GPPGPKGDPGTVGDPGPMGLPGLEGLPGEKGD---------RGPAGAPGVSGTPGKPG 789



 Score = 46.2 bits (108), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 98/274 (35%), Gaps = 109/274 (39%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP----GPQGIP 154
            +G CN  +     G +G  G+ G  G  G  G+KG+ G  GA G  G      GPQG P
Sbjct: 288 FKGICNIEELNYQLGEKGDKGEPGPEGLPGTEGLKGDPGSPGADGPKGEKGLLEGPQGPP 347

Query: 155 GDEGKRGPK--------------------------------------------------- 163
           G EG+RG +                                                   
Sbjct: 348 GKEGQRGRRGKPGLPGKPGPPGPPGPSGLKGILDSLNKHYNESDARLLGELGTLGLKGQK 407

Query: 164 GDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGL------PGEPGLDGIPGRN 214
           GD+G  G  G+ G +G++G    KGD G PG  GL+G  G       PG PGL G PG  
Sbjct: 408 GDIGQKGELGVTGAKGEKGEPSVKGDKGDPGETGLEGSKGNKGEMGDPGPPGLIGNPGSK 467

Query: 215 GMD---------------GIPGKDGLPGKDGI---------------------------- 231
           G+                G+PG  G+PG  GI                            
Sbjct: 468 GLQGPPGPVGPRGLPGEVGLPGDPGVPGNPGIKGDKGDPGGIMGPPGHPGPKGDMGPPGP 527

Query: 232 --PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             PGT G  G  G  GPRG +G+ G+ GV G P 
Sbjct: 528 SLPGTPGPTGVPGNPGPRGPKGERGLPGVQGAPG 561


>gi|403300300|ref|XP_003940885.1| PREDICTED: collagen alpha-1(III) chain [Saimiri boliviensis
           boliviensis]
          Length = 1465

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 80/175 (45%), Gaps = 45/175 (25%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG---------------------------IPGDE 157
           GAKGE+G  G  G  GAPG  G PGPQG                           IPG  
Sbjct: 348 GAKGEVGPAGAPGSSGAPGQRGEPGPQGHAGAQGPPGPPGSNGSPGGKGEMGPAGIPGAP 407

Query: 158 GK------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G                   RG  G+ G  G +G PG  G+RG  G  G PG  G DG+D
Sbjct: 408 GLIGARGPPGPPGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGTPGIPGAKGEDGKD 467

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G PGEPG +G+PG  G  G PG  G  G +G+PG  G  GE+G  GP G RG +G
Sbjct: 468 GSPGEPGANGLPGAAGERGAPGFRGPAGPNGVPGEKGPAGERGAPGPAGPRGAAG 522



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 61/112 (54%), Gaps = 9/112 (8%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L+G  G+ G+ GAKGE G +GERGE G P         GIPG +G+ G  G  G PG  G
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGTP---------GIPGAKGEDGKDGSPGEPGANG 477

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +PG  G+RG  G  G  G  G+ G  G  GE G  G  G  G  G PG+DGL
Sbjct: 478 LPGAAGERGAPGFRGPAGPNGVPGEKGPAGERGAPGPAGPRGAAGEPGRDGL 529



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 89/224 (39%), Gaps = 78/224 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
           PGL+G  G  GE GA G MG +G  GE+G PG+   PG  G  G++G RG          
Sbjct: 281 PGLKGENGLPGENGAPGPMGPRGAPGERGRPGL---PGAAGARGNDGARGSDGQPGPPGP 337

Query: 164 ----------------GDMGYPGPQGIPGDEGKRGP---------------------KGD 186
                           G  G PG  G PG  G+ GP                     KG+
Sbjct: 338 PGTAGFPGSPGAKGEVGPAGAPGSSGAPGQRGEPGPQGHAGAQGPPGPPGSNGSPGGKGE 397

Query: 187 M---GYPGRIGL------------------------DGRDGLPGEPGLDGIPGRNGMDGI 219
           M   G PG  GL                         G++G  GEPG  G  G  G  GI
Sbjct: 398 MGPAGIPGAPGLIGARGPPGPPGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGTPGI 457

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
           PG  G  GKDG PG  G NG  G  G RG    RG +G NGVPG
Sbjct: 458 PGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGVPG 501



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 80/182 (43%), Gaps = 39/182 (21%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  G+ G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG++G  G++G  GP+G+                  +G+ G  G+PG P
Sbjct: 348 GAKGEVGPAGAPGSSGAPGQRGEPGPQGHAGAQGPPGPPGSNGSPGGKGEMGPAGIPGAP 407

Query: 263 AI 264
            +
Sbjct: 408 GL 409



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 82/214 (38%), Gaps = 63/214 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306

Query: 171 PQGIPGDEGKRGPKGD------------------------MGYPGRIGLDGRDGLPGEPG 206
            +G PG  G  G +G+                         G  G +G  G  G  G PG
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGAPGSSGAPG 366

Query: 207 LDGIPGRNGMDGIP------------------GKDGLPGKDGI----------------- 231
             G PG  G  G                    G  G+PG  G+                 
Sbjct: 367 QRGEPGPQGHAGAQGPPGPPGSNGSPGGKGEMGPAGIPGAPGLIGARGPPGPPGANGAPG 426

Query: 232 ----PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                G  G NG KG  GPRG RG++G  G+PG 
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGTPGIPGA 460



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 9/72 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------P 162
           PG +G  G+ G  G  G  G+ G  GE+GAPG  GP GP G+PG++G  G         P
Sbjct: 458 PGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGVPGEKGPAGERGAPGPAGP 517

Query: 163 KGDMGYPGPQGI 174
           +G  G PG  G+
Sbjct: 518 RGAAGEPGRDGL 529


>gi|357625679|gb|EHJ76042.1| putative Collagen alpha-1(XI) chain precursor [Danaus plexippus]
          Length = 807

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 90/173 (52%), Gaps = 33/173 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGYP 169
           G +GP G +GE G +G    +GERGE G+PG  GP GPQG  G  G R   GPKGD G P
Sbjct: 280 GRRGPKGNQGEQGPRGP---EGERGEIGSPGSTGPQGPQGSEGKVGPRGYAGPKGDDGLP 336

Query: 170 GP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------------- 210
           GP      +G+PG EG +G  G  G+PG  G  G  G+ GEPG DG              
Sbjct: 337 GPPGEAGAKGLPGPEGAKGDTGPSGFPGDRGEPGPQGVKGEPGTDGPEGSPGPPGSPGPI 396

Query: 211 -----PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                PG  G+ G PG +G P   GI G  G  GEKG  GPRG +G+ G  G 
Sbjct: 397 GPIGKPGETGIPGSPGTEGQP---GIQGNPGNPGEKGNMGPRGLQGEQGPPGA 446



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/147 (45%), Positives = 78/147 (53%), Gaps = 21/147 (14%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGE---------KGAPGVVGPPGPQGIPGDEGKRG 161
           PPGL   IG+ G  G KG+ G KG+ GE          G  G VG  GP+G  G++G RG
Sbjct: 239 PPGL---IGKIGPEGPKGDQGSKGDSGEVGPIGPPGPAGPTGSVGRRGPKGNQGEQGPRG 295

Query: 162 P---KGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           P   +G++G PG   PQG  G EGK GP+G   Y G  G DG  G PGE G  G+PG  G
Sbjct: 296 PEGERGEIGSPGSTGPQGPQGSEGKVGPRG---YAGPKGDDGLPGPPGEAGAKGLPGPEG 352

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             G  G  G PG  G PG  G  GE G
Sbjct: 353 AKGDTGPSGFPGDRGEPGPQGVKGEPG 379



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 87/190 (45%), Gaps = 48/190 (25%)

Query: 119 GQKGEIGAKGEMGVKGERGE---KGAPGVVG---PPGPQGIPGD---------------E 157
           G KGE G  GE G KG  G+    GAPG+ G    PGP G+PGD               +
Sbjct: 175 GDKGESGPPGEKGFKGAMGQPGPSGAPGIQGLRGEPGPVGLPGDKGPPGDIGPPGPAGTD 234

Query: 158 GKRGPKGDMGYPGPQGIPGDEG------------------------KRGPKGDMGYPGRI 193
           G RGP G +G  GP+G  GD+G                        +RGPKG+ G  G  
Sbjct: 235 GTRGPPGLIGKIGPEGPKGDQGSKGDSGEVGPIGPPGPAGPTGSVGRRGPKGNQGEQGPR 294

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRGNR 250
           G +G  G  G PG  G  G  G +G  G  G  G    DG+PG  G  G KG+ GP G +
Sbjct: 295 GPEGERGEIGSPGSTGPQGPQGSEGKVGPRGYAGPKGDDGLPGPPGEAGAKGLPGPEGAK 354

Query: 251 GKSGINGVPG 260
           G +G +G PG
Sbjct: 355 GDTGPSGFPG 364



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 84/181 (46%), Gaps = 39/181 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G +G++G +G  G KG+ G  G PG  G    +G+PG EG    KGD    GP 
Sbjct: 310 GPQGPQGSEGKVGPRGYAGPKGDDGLPGPPGEAGA---KGLPGPEGA---KGDT---GPS 360

Query: 173 GIPGDEGKRGPKGDMGYPG------------------RIGLDGRDGLPGEPGLDGIPGRN 214
           G PGD G+ GP+G  G PG                   IG  G  G+PG PG +G PG  
Sbjct: 361 GFPGDRGEPGPQGVKGEPGTDGPEGSPGPPGSPGPIGPIGKPGETGIPGSPGTEGQPGIQ 420

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGE------------KGMTGPRGNRGKSGINGVPGTP 262
           G  G PG+ G  G  G+ G  G  G             +G+ GP G+ G  G+ G  G P
Sbjct: 421 GNPGNPGEKGNMGPRGLQGEQGPPGAIGPVGPEGPPGLRGLAGPTGDVGAPGVMGPMGVP 480

Query: 263 A 263
            
Sbjct: 481 G 481



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 91/205 (44%), Gaps = 51/205 (24%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------PQGIP 154
           G   ST    P G +G +G +G  G KG+ G+ G  GE GA G+ GP G      P G P
Sbjct: 304 GSPGSTGPQGPQGSEGKVGPRGYAGPKGDDGLPGPPGEAGAKGLPGPEGAKGDTGPSGFP 363

Query: 155 GDEGKRGPKGDMGYPGPQ---------------------------GIPGDEGKRGPKGDM 187
           GD G+ GP+G  G PG                             G PG EG+ G +G+ 
Sbjct: 364 GDRGEPGPQGVKGEPGTDGPEGSPGPPGSPGPIGPIGKPGETGIPGSPGTEGQPGIQGNP 423

Query: 188 GYPGRIGLDGRDGLPGEPG---------------LDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG  G  G  GL GE G               L G+ G  G  G P   G+ G  G+P
Sbjct: 424 GNPGEKGNMGPRGLQGEQGPPGAIGPVGPEGPPGLRGLAGPTGDVGAP---GVMGPMGVP 480

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G +G+ G++G+ G +GNRG  G  G
Sbjct: 481 GPSGSPGQQGIKGEKGNRGAKGHTG 505



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 3/102 (2%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE- 157
           ++G    T +   PG+ GP+G  G  G+ G+ G+KGE+G +GA G  G  G  GI GD+ 
Sbjct: 458 LRGLAGPTGDVGAPGVMGPMGVPGPSGSPGQQGIKGEKGNRGAKGHTGDTGNIGIKGDQG 517

Query: 158 --GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
             GK+GP G +G  GP+G  G  G  G KGD+G  G  GL+G
Sbjct: 518 EIGKQGPTGPIGPMGPKGDTGPIGPPGSKGDVGPAGLAGLEG 559



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 89/192 (46%), Gaps = 39/192 (20%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMG---------------------------VKGERGEKG 140
           E  PPGLQGP G  G  G  G  G                             GE G  G
Sbjct: 26  EPGPPGLQGPSGMSGAPGEVGPPGDSGKEGHPGPPGPEGKPGPLGPPGSPGANGEPGLPG 85

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---------RGPKGDMGYPG 191
           APG+ G  G  G PG  G RG KG+ G PG +G+ G  G+          G KG++G PG
Sbjct: 86  APGIPGSKGDMGPPGQAGVRGEKGEQGEPGREGLQGLIGRDGPRGSPGPGGQKGEVGEPG 145

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            IG  GRDGLPG  GL G+PG  G    DG  G+ G PG+ G  G  G  G  G  G +G
Sbjct: 146 PIGPVGRDGLPGPRGLSGVPGPIGPPGEDGDKGESGPPGEKGFKGAMGQPGPSGAPGIQG 205

Query: 249 NRGKSGINGVPG 260
            RG+ G  G+PG
Sbjct: 206 LRGEPGPVGLPG 217



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 82/184 (44%), Gaps = 39/184 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------------- 153
           GL GP G+ G  G  G  G KG+ G  G PG  G PGPQG+                   
Sbjct: 334 GLPGPPGEAGAKGLPGPEGAKGDTGPSGFPGDRGEPGPQGVKGEPGTDGPEGSPGPPGSP 393

Query: 154 --------PGDEGKRGPKGDMGYPGPQGIPGDEGK------RGPKGDMGYPGRIGLDGRD 199
                   PG+ G  G  G  G PG QG PG+ G+      RG +G+ G PG IG  G +
Sbjct: 394 GPIGPIGKPGETGIPGSPGTEGQPGIQGNPGNPGEKGNMGPRGLQGEQGPPGAIGPVGPE 453

Query: 200 ------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 GL G  G  G PG  G  G+PG  G PG+ GI G  G  G KG TG  GN G  
Sbjct: 454 GPPGLRGLAGPTGDVGAPGVMGPMGVPGPSGSPGQQGIKGEKGNRGAKGHTGDTGNIGIK 513

Query: 254 GING 257
           G  G
Sbjct: 514 GDQG 517



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 67/142 (47%), Gaps = 12/142 (8%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD------------EGKR 181
           GE G  G+PG  G PG QG PG+ G++G  G  G  G QG PG              G  
Sbjct: 403 GETGIPGSPGTEGQPGIQGNPGNPGEKGNMGPRGLQGEQGPPGAIGPVGPEGPPGLRGLA 462

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP GD+G PG +G  G  G  G PG  GI G  G  G  G  G  G  GI G  G  G++
Sbjct: 463 GPTGDVGAPGVMGPMGVPGPSGSPGQQGIKGEKGNRGAKGHTGDTGNIGIKGDQGEIGKQ 522

Query: 242 GMTGPRGNRGKSGINGVPGTPA 263
           G TGP G  G  G  G  G P 
Sbjct: 523 GPTGPIGPMGPKGDTGPIGPPG 544



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 73/152 (48%), Gaps = 18/152 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---------------GPPGPQGIPGD 156
           PG+QG  G  GE   KG MG +G +GE+G PG +               GP G  G PG 
Sbjct: 417 PGIQGNPGNPGE---KGNMGPRGLQGEQGPPGAIGPVGPEGPPGLRGLAGPTGDVGAPGV 473

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G  G  G PG QGI G++G RG KG  G  G IG+ G  G  G+ G  G  G  G 
Sbjct: 474 MGPMGVPGPSGSPGQQGIKGEKGNRGAKGHTGDTGNIGIKGDQGEIGKQGPTGPIGPMGP 533

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            G  G  G PG  G  G  G  G +G  GP+G
Sbjct: 534 KGDTGPIGPPGSKGDVGPAGLAGLEGPLGPKG 565



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 61/135 (45%), Gaps = 39/135 (28%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L    G   S  +  PPG  G  G+KGE G  G  G++G               ++GE G
Sbjct: 83  LPGAPGIPGSKGDMGPPGQAGVRGEKGEQGEPGREGLQGLIGRDGPRGSPGPGGQKGEVG 142

Query: 141 APGVVGP------PGPQGIP------------GDEGKRGP------KGDMGYPGPQGIPG 176
            PG +GP      PGP+G+             GD+G+ GP      KG MG PGP G PG
Sbjct: 143 EPGPIGPVGRDGLPGPRGLSGVPGPIGPPGEDGDKGESGPPGEKGFKGAMGQPGPSGAPG 202

Query: 177 DEGKRGPKGDMGYPG 191
            +G RG  G +G PG
Sbjct: 203 IQGLRGEPGPVGLPG 217



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 87/182 (47%), Gaps = 39/182 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------KGD 165
           PG  G  G KG++G  G+ GV+GE+GE+G PG  G    QG+ G +G RG       KG+
Sbjct: 84  PGAPGIPGSKGDMGPPGQAGVRGEKGEQGEPGREGL---QGLIGRDGPRGSPGPGGQKGE 140

Query: 166 MGYPGPQGIPGDEGKRGPK---------------GDMGYPGRIGLDGRDGLPGEPGLDGI 210
           +G PGP G  G +G  GP+               GD G  G  G  G  G  G+PG  G 
Sbjct: 141 VGEPGPIGPVGRDGLPGPRGLSGVPGPIGPPGEDGDKGESGPPGEKGFKGAMGQPGPSGA 200

Query: 211 PGRNGMDGIPGKDGLPG---------------KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           PG  G+ G PG  GLPG                DG  G  G  G+ G  GP+G++G  G 
Sbjct: 201 PGIQGLRGEPGPVGLPGDKGPPGDIGPPGPAGTDGTRGPPGLIGKIGPEGPKGDQGSKGD 260

Query: 256 NG 257
           +G
Sbjct: 261 SG 262



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 69/183 (37%), Gaps = 66/183 (36%)

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDE----------------------------------- 178
           PG  G +GP G  G PG  G PGD                                    
Sbjct: 27  PGPPGLQGPSGMSGAPGEVGPPGDSGKEGHPGPPGPEGKPGPLGPPGSPGANGEPGLPGA 86

Query: 179 -GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---------------GIPGK 222
            G  G KGDMG PG+ G+ G  G  GEPG +G+ G  G D               G PG 
Sbjct: 87  PGIPGSKGDMGPPGQAGVRGEKGEQGEPGREGLQGLIGRDGPRGSPGPGGQKGEVGEPGP 146

Query: 223 DGLPGKDGIPGTNG------------TNGEKGMTGPRGNRGKSGINGVP---GTPAICAY 267
            G  G+DG+PG  G             +G+KG +GP G +G  G  G P   G P I   
Sbjct: 147 IGPVGRDGLPGPRGLSGVPGPIGPPGEDGDKGESGPPGEKGFKGAMGQPGPSGAPGIQGL 206

Query: 268 KRE 270
           + E
Sbjct: 207 RGE 209


>gi|295815585|gb|ADG36300.1| collagen type XI alpha-1a [Danio rerio]
          Length = 1813

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 85/155 (54%), Gaps = 9/155 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGPPGPQGIPGDEGKRGPKGD 165
           PG QGPIG  G  G KG  GV+G +G KG       PG  G  G +G  G+ G  GP+G+
Sbjct: 758 PGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGELGLAGPRGE 817

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  GP+G  G  G+ GP+G  G  G++G+    GLPG PG  G  G  G  G PG +G 
Sbjct: 818 DGPEGPKGRAGPNGESGPQGSAGEKGKLGV---PGLPGYPGRQGPKGSTGFPGFPGANGE 874

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G  G++G TGPRG RG  G  G PG
Sbjct: 875 KGGRGVAGKAGPRGQRGPTGPRGARGARGPTGKPG 909



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 87/211 (41%), Gaps = 75/211 (35%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  G++G  GA G  G+ GE G KG  G  G PG   +PG++G R          
Sbjct: 577 PPGQIGKPGKRGRAGADGARGMPGESGSKGDRGFDGLPG---LPGEKGHRGETGPAGPPG 633

Query: 161 -----GPKGDMGYPGPQGIPGD------------------------EGKRGPKGDMGYPG 191
                GP+G+ G  GP+G+ G+                        +G +GPKG+MG  G
Sbjct: 634 PTGEDGPRGEDGEIGPRGLAGESGPRGLLGPRGPPGPPGQPGIAGVDGPQGPKGNMGPQG 693

Query: 192 ---------------------------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                                        G  GR GLPG PG DG PG       PGK+G
Sbjct: 694 EPGPPGQQGIPGGQGLPGPQGPIGPPGEKGPQGRSGLPGLPGADGPPGH------PGKEG 747

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            PG+ G  G  G  G  G  GPRG +G  G+
Sbjct: 748 PPGEKGALGQPGPQGPIGYPGPRGVKGADGV 778



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 55/103 (53%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G+ G  G KG  G  GE G +G+ G  G  G  G+PG  G++GPKG  G+PG  
Sbjct: 810 GLAGPRGEDGPEGPKGRAGPNGESGPQGSAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFP 869

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           G  G++G RG  G  G  G+ G  G  G  G  G  G PG  G
Sbjct: 870 GANGEKGGRGVAGKAGPRGQRGPTGPRGARGARGPTGKPGPKG 912



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 60/125 (48%), Gaps = 24/125 (19%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----- 176
            G  G +GE G KGE G +G PG  GP GPQG     GK GP+G  G PGP G  G     
Sbjct: 1377 GAEGRQGEKGAKGEAGLEGPPGKTGPVGPQGP---SGKPGPEGLRGIPGPVGEQGLPGAP 1433

Query: 177  ----------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                             +G  G KG+ G+PG IGL G  G  GE G  G+PG  G  G  
Sbjct: 1434 GQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGAAGSK 1493

Query: 221  GKDGL 225
            G +G+
Sbjct: 1494 GDNGI 1498



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 65/152 (42%), Gaps = 39/152 (25%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           KG +G  G PG+ G  GP G PG EG  G KG +G PGPQG             +GYP  
Sbjct: 722 KGPQGRSGLPGLPGADGPPGHPGKEGPPGEKGALGQPGPQGP------------IGYP-- 767

Query: 193 IGLDGRDGL---------------------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
               G  G+                     PG  G  G+ G  G  G+ G  G  G +G 
Sbjct: 768 ----GPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGELGLAGPRGEDGPEGP 823

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G NGE G  G  G +GK G+ G+PG P 
Sbjct: 824 KGRAGPNGESGPQGSAGEKGKLGVPGLPGYPG 855



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 57/125 (45%), Gaps = 24/125 (19%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------- 207
            G EG++G KG  G  G +G PG  G  GP+G  G PG  GL G  G  GE GL       
Sbjct: 1377 GAEGRQGEKGAKGEAGLEGPPGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAPGQD 1436

Query: 208  --------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                           G PG  G  G PG  GL    G PG  G  G++G+ GP+G  G  
Sbjct: 1437 GPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGL---IGPPGEQGEKGDRGLPGPQGAAGSK 1493

Query: 254  GINGV 258
            G NG+
Sbjct: 1494 GDNGI 1498



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 72/145 (49%), Gaps = 24/145 (16%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDM-------GYPGPQG--IPGDEGK---------- 180
           G PG  GPPG  G+PG +G  GP G M       G  G +G  +   E +          
Sbjct: 474 GDPGDRGPPGRAGLPGADGLPGPPGTMLMLPFRFGGDGEKGPVVSAQEAQAQAILSQARL 533

Query: 181 --RGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
             RGP G MG  GR   +GL G  GL GE G  G  G  G+ G PG+ G PGK G  G +
Sbjct: 534 AMRGPPGPMGLTGRSGPVGLPGPPGLKGESGDHGPQGPRGIQGPPGQIGKPGKRGRAGAD 593

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G +G +G+RG  G+ G+PG
Sbjct: 594 GARGMPGESGSKGDRGFDGLPGLPG 618



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 62/126 (49%), Gaps = 24/126 (19%)

Query: 146 GPPGPQGIPG---------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG---RI 193
           GPPGP G+ G           G +G  GD G  GP+GI      +GP G +G PG   R 
Sbjct: 537 GPPGPMGLTGRSGPVGLPGPPGLKGESGDHGPQGPRGI------QGPPGQIGKPGKRGRA 590

Query: 194 GLDGRDGLPGEPG------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G DG  G+PGE G       DG+PG  G  G  G+ G  G  G  G +G  GE G  GPR
Sbjct: 591 GADGARGMPGESGSKGDRGFDGLPGLPGEKGHRGETGPAGPPGPTGEDGPRGEDGEIGPR 650

Query: 248 GNRGKS 253
           G  G+S
Sbjct: 651 GLAGES 656



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
           KG  G  GP GP+GI      +GP G +G PG +G  G +G RG  G+ G  G  G DG 
Sbjct: 560 KGESGDHGPQGPRGI------QGPPGQIGKPGKRGRAGADGARGMPGESGSKGDRGFDGL 613

Query: 199 DGLPGEPG 206
            GLPGE G
Sbjct: 614 PGLPGEKG 621



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG  G  G  G  GE+G +G  G  GP G +G  G  G RG +G  G PGP
Sbjct: 854 PGRQGP---KGSTGFPGFPGANGEKGGRGVAGKAGPRGQRGPTGPRGARGARGPTGKPGP 910

Query: 172 QG 173
           +G
Sbjct: 911 KG 912


>gi|114608073|ref|XP_518574.2| PREDICTED: collagen alpha-1(IX) chain isoform 2 [Pan troglodytes]
          Length = 678

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 106/208 (50%), Gaps = 48/208 (23%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKG---------ERGEKG 140
           L  M+G   +  E   PG QG  G++G      E+GA+G  G +G         ++GEKG
Sbjct: 182 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEFGEVGAQGPPGAQGLRGITGIVGDKGEKG 241

Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQG+PG   D+G+RGP      KGD G  G +GIPG  G    KGD G PG
Sbjct: 242 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGVEGARGIPGLPGS---KGDTGLPG 298

Query: 192 RIGLDGRDGLPGEP------------------GLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
              +DGRDG+PG P                  GL G+PG  G  G+ G+ G  G  G PG
Sbjct: 299 ---VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSAGAPGKPG 355

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G +G+ G  GP G  G  G  G+PG+
Sbjct: 356 QMGNSGKPGQQGPPGEVGPRGPQGLPGS 383



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGEFGEVGAQGPPGAQGLRGITGIV 234

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  G+PG  G  G++   G  GP+G+RG  G  G+PG P 
Sbjct: 235 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGVEGARGIPGLPG 289



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA         +GIPG  G    KGD G
Sbjct: 248 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGVEGA---------RGIPGLPGS---KGDTG 295

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 296 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSAGAPGKPG 355

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GP+   G+RG+ G  G PG P 
Sbjct: 356 QMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 397



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 73/134 (54%), Gaps = 6/134 (4%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G+ G RG KGA G +G PG QG  G+EG +G  G++G  GP G  G  G  G  GD G  
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEFGEVGAQGPPGAQGLRGITGIVGDKGEK 240

Query: 191 GRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  GLDG     GLPG PG  G  G  G  G  G  G+ G  GIPG  G+ G+ G+    
Sbjct: 241 GARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGVEGARGIPGLPGSKGDTGLP--- 297

Query: 248 GNRGKSGINGVPGT 261
           G  G+ GI G+PGT
Sbjct: 298 GVDGRDGIPGMPGT 311



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G++G  GPQ
Sbjct: 325 GLQGLPGVPGIPGAKG---VAGEKGSAGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 378

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PG+
Sbjct: 379 GLPGSRGELGPVGSPGLPGK 398


>gi|426352697|ref|XP_004043846.1| PREDICTED: collagen alpha-2(XI) chain isoform 1 [Gorilla gorilla
           gorilla]
          Length = 1736

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 93/188 (49%), Gaps = 42/188 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE G +G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 660 PGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 719

Query: 172 QGIPG------------------------DEGKRGPKGDMGYPGRIGLDG------RDGL 201
           +G+ G                        D G +G +GD+G PG  G DG      R GL
Sbjct: 720 RGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGDVGVPGSRGEDGPEGPKGRTGL 779

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGM------TGPRGN 249
            G+PG  G+ G  G  G+PG  G PG+       G PG  G +GEKG       +GPRG 
Sbjct: 780 TGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGE 839

Query: 250 RGKSGING 257
           RG +G  G
Sbjct: 840 RGPTGPRG 847



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 82/153 (53%), Gaps = 9/153 (5%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QGP+G  G  G KG  G++G +G KG  G  G P   G  GD G +G +GD+G PG
Sbjct: 707 PSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFP---GFKGDIGVKGDRGDVGVPG 763

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDG 224
            +G  G EG +G  G  G PG  GL G  G  G PGL G PGR       G  G PG  G
Sbjct: 764 SRGEDGPEGPKGRTGLTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASG 823

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G+ G +G  GE+G TGPRG RG  G  G
Sbjct: 824 EKGARGLSGKSGPRGERGPTGPRGQRGPRGATG 856



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 79/150 (52%), Gaps = 12/150 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +G  G +G +G  GE+G +G PG+ G PG  G PG  GK GP G           G++
Sbjct: 655 GTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTK---------GNQ 705

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G  GP+G +GYPG  G+ G DG+    GL G  G  G DG PG  G  G  G  G  G  
Sbjct: 706 GPSGPQGPLGYPGPRGVKGVDGI---RGLKGHKGEKGEDGFPGFKGDIGVKGDRGDVGVP 762

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G +G  GP G +G++G+ G PG P +   K
Sbjct: 763 GSRGEDGPEGPKGRTGLTGDPGPPGLMGEK 792



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 79/149 (53%), Gaps = 18/149 (12%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG++GVKG+RG+ G PG  G  GP      EG +G  G  G P
Sbjct: 730 GLKGHKGEKGEDGFPGFKGDIGVKGDRGDVGVPGSRGEDGP------EGPKGRTGLTGDP 783

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G+ G++GK G  G  GYPGR G  G  G PG PG  G  G  G+          GK 
Sbjct: 784 GPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLS---------GKS 834

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G  G  G +G  GPRG  GKSG  G 
Sbjct: 835 GPRGERGPTGPRGQRGPRGATGKSGAKGT 863



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 95/204 (46%), Gaps = 54/204 (26%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRG 161
           PPG  G  G+ G  GA+G   E GVKG+RG  G PG+ G  G       QG+PG  G+ G
Sbjct: 530 PPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG 589

Query: 162 PKGDMGYPGPQGIPGDEGKRG------------------------PKGDM---------- 187
            +GD G  GP+G+PG+ G RG                        PKG +          
Sbjct: 590 ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPG 649

Query: 188 --------GYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   G PG    IG  G  G  G+PGL G+PG +G  G PGK+G PG  G  G +G
Sbjct: 650 QQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 709

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GPRG +G  GI G+ G
Sbjct: 710 PQGPLGYPGPRGVKGVDGIRGLKG 733



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 78/161 (48%), Gaps = 24/161 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G +GE G  G+ G  G  GE G PG +G  GP G PG EG++G KG  G PG  G PG  
Sbjct: 1291 GDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGPEGRQGGKGAKGDPGAIGAPGKT 1350

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM------------------DGIP 220
            G  GP G  G P   G DG  GLPG  G  G PG  G                    G  
Sbjct: 1351 GPVGPAGPAGKP---GPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAK 1407

Query: 221  GKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G+ G PG  G+   PG  G  G++G+ GP+G+ G+ G  G+
Sbjct: 1408 GEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGI 1448



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 87/193 (45%), Gaps = 45/193 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+GQ G  G KGE G  G +G +G  G+ GPPG             +G+PG+ G  
Sbjct: 496 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGV- 554

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI- 219
             KGD G+ G  G+PG++G RG  G  G PG  G DG  G  GE G  G+PG +G  G+ 
Sbjct: 555 --KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLL 612

Query: 220 --------------PGKDGLPGKDG---------------IPGTNGTNGEKGMTGPRGNR 250
                          G DG  G  G                PGT G  G +G  GP G +
Sbjct: 613 GPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEK 672

Query: 251 GKSGINGVPGTPA 263
           G  G  G+PG P 
Sbjct: 673 GPQGKPGLPGMPG 685



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 87/201 (43%), Gaps = 64/201 (31%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------------------- 159
           G  G +G  G  G+ GE+G PG  G PG  G PG  G                       
Sbjct: 411 GPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQ 470

Query: 160 ---------------RGPKGDMGY---PGPQGIPGD------------EGKRGPKGDMGY 189
                          RGP G MGY   PGP G PG             +G RGP+G  G 
Sbjct: 471 EAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP 530

Query: 190 P------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGE 240
           P      GR G DG  G+PGEPG+ G  G +G+ G+PG+ G     G  G+PG  G +GE
Sbjct: 531 PGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGE 590

Query: 241 K---GMTGPRGNRGKSGINGV 258
           +   G  GPRG  G+SG  G+
Sbjct: 591 RGDDGEIGPRGLPGESGPRGL 611



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 96/230 (41%), Gaps = 57/230 (24%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G         P G QG  G  G+ G +G  G  G RG  G PGV G  G  G+PG  
Sbjct: 508 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLP 567

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIG-------------------- 194
           G++G +GD G  G  G PG++G+RG  G++   G PG  G                    
Sbjct: 568 GEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVR 627

Query: 195 -LDGRDGLPGE---------------PGLDGIP---------------GRNGMDGIPGKD 223
            +DG  G  G                PG  G+P               G+ G+ G+PG D
Sbjct: 628 GMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSD 687

Query: 224 GL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G    PGK+G PGT G  G  G  GP G  G  G+ GV G   +  +K E
Sbjct: 688 GPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 737



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 58/118 (49%), Gaps = 24/118 (20%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KG+RGE G PG  G PGP G      + GP G +G  GP G PG EG++G KG  G P
Sbjct: 1288 GAKGDRGEDGEPGQPGSPGPTG------ENGPPGPLGKRGPAGSPGPEGRQGGKGAKGDP 1341

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTG 245
            G I               G PG+ G  G  G  G PG D   G+PG+ G  G  G TG
Sbjct: 1342 GAI---------------GAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATG 1384



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 71/149 (47%), Gaps = 27/149 (18%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
            G    T E  PPG   P+G++G  G+ G  G +G +G KG PG +G PG   P G  G  
Sbjct: 1303 GSPGPTGENGPPG---PLGKRGPAGSPGPEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPA 1359

Query: 158  GKRGPKGDMGYPGP---QGIPGDEGKR------------------GPKGDMGYPGRIGLD 196
            GK GP G  G PG    QG PG  G+                   G KG+ G+PG IGL 
Sbjct: 1360 GKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLI 1419

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1420 GPPGEQGEKGDRGLPGPQGSPGQKGEMGI 1448



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 56/144 (38%), Gaps = 49/144 (34%)

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG----------------------- 206
           GP GI G+ G  G  G+ G PGR GL G DG PG PG                       
Sbjct: 411 GPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQ 470

Query: 207 --------------LDGIP------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                         L G P      GR G  G PG  GL G+ G  G  G  G +G+TGP
Sbjct: 471 EAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP 530

Query: 247 ------RGNRGKSGINGVPGTPAI 264
                 RG  G  G  G+PG P +
Sbjct: 531 PGKAGRRGRAGADGARGMPGEPGV 554


>gi|344268756|ref|XP_003406222.1| PREDICTED: collagen alpha-2(V) chain-like [Loxodonta africana]
          Length = 1500

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 460 GPPGIRGQPGDPGFPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 516

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 517 GTVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 573

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 574 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 623



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 91/172 (52%), Gaps = 15/172 (8%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     E  P G  GP G +G IG  GE   +G+RG +G PG VGPPG  G  G  G R
Sbjct: 472 GFPGFKGEAGPKGEPGPHGIQGPIGPPGE---EGKRGPRGDPGTVGPPGTVGERGAPGNR 528

Query: 161 GPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G  G+ 
Sbjct: 529 GFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKL 588

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
           G  G PG+DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 589 GPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPG 640



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 80/157 (50%), Gaps = 6/157 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G +GP G+ GE G  G  G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  
Sbjct: 256 GPEGPPGKSGEDGETGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEV 315

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LP 226
           G  G +G+ GP G MG  G +G  G  G  G  G  G PG+ G  G+PGK G      +P
Sbjct: 316 GATGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIP 375

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G PG  G  GE G TG RG  G  G  G  G P 
Sbjct: 376 GSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPG 412



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 89/195 (45%), Gaps = 30/195 (15%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG-- 155
            M+G    T    P   +GP GQ+GE G  G +G +G  G  G  G  G  GP G PG  
Sbjct: 385 GMKGEAGPTGARGP---EGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGPTGSPGTS 441

Query: 156 -------------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                         +G  GP G  G PG  G PG +G+ GPKG+   PG  G+ G  G P
Sbjct: 442 GPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGFPGFKGEAGPKGE---PGPHGIQGPIGPP 498

Query: 203 GE---------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           GE         PG  G PG  G  G PG  G PG DG+PG  G  GE+G  G  G +G  
Sbjct: 499 GEEGKRGPRGDPGTVGPPGTVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQ 558

Query: 254 GINGVPGTPAICAYK 268
           G  G PG P +   +
Sbjct: 559 GDPGRPGEPGLPGAR 573



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 748 GPTGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGPLGPP 807

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 808 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 866

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 867 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 914



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 76/161 (47%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF  S      PG  G  G KG  G KG  G KGE G  G+ G  GP GP G  G  G R
Sbjct: 280 GFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPMGPR 339

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G+ G  GPQG PG  G  G  G  G  G +G+ G  G PG PG+ G  G  G  G  
Sbjct: 340 GMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPE 399

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G+ G PG  G+ G  G  G  G  G  G  G PGT
Sbjct: 400 GPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGPTGSPGT 440



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 579 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGV 638

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 639 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 698

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 699 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTPGDTGP 758

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 759 PGLQGMPGERGIAGTPGPKGDRGGVGEKGAEGT 791



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 84/175 (48%), Gaps = 30/175 (17%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQ 151
             +G      E  P G+QGPIG  GE G +G       +G  G  GE+GAPG  G PG  
Sbjct: 475 GFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGTVGERGAPGNRGFPGSD 534

Query: 152 GIPGD---EGKRGP---------KGDMGYPGPQGIPG------------DEGKRGPKGDM 187
           G+PG    +G+RGP         +GD G PG  G+PG             EGK GP G  
Sbjct: 535 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 594

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
           G  GR G  G  G+ G+PG  G+PG  G  G  GK G  G  G+PG  G  G+ G
Sbjct: 595 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDG 649



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 88/203 (43%), Gaps = 51/203 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 297 PGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQ 356

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGL------------------PGEPGL 207
            G  G+PG  G  GP    G  G+PG  G+ G  G                   PG  G 
Sbjct: 357 RGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGS 416

Query: 208 DGIPGRNGMDGIPGKD---------------------------GLPGKDGIPGTNGTNGE 240
            G+PG  G DG PG                             G PG  G PG  G  G 
Sbjct: 417 QGLPGAVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGFPGF 476

Query: 241 KGMTGPRGNRGKSGINGVPGTPA 263
           KG  GP+G  G  GI G  G P 
Sbjct: 477 KGEAGPKGEPGPHGIQGPIGPPG 499



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 86/198 (43%), Gaps = 33/198 (16%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGP--- 147
           V   G         P G  GP+G +G  G +G +G +G  G++GA      PG +GP   
Sbjct: 315 VGATGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGI 374

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G +G  G  G  GP+G  G  G+ GP G +G  G  G  G DG PG  G 
Sbjct: 375 PGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAVGTDGTPGAKGP 434

Query: 208 DGIPGRNGMD---------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR----- 247
            G PG +G                 G PG  G PG  G PG  G  G KG  GP      
Sbjct: 435 TGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGFPGFKGEAGPKGEPGPHGIQGP 494

Query: 248 ----GNRGKSGINGVPGT 261
               G  GK G  G PGT
Sbjct: 495 IGPPGEEGKRGPRGDPGT 512



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG     G  GP G 
Sbjct: 702 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTPGDTGPPGL 761

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 762 QGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 821

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 822 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 868



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 84/191 (43%), Gaps = 54/191 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------------VGPPGP- 150
           GL GP G  G++G  GE G  G  G++GAPG                       GPPGP 
Sbjct: 616 GLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPT 675

Query: 151 --------------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
                               QG+PGD G  GP G      P+G  G+ G+RG  G  G P
Sbjct: 676 GFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLG------PRGERGNPGERGEPGITGLP 729

Query: 191 GRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G  G+ G    DG  G PG  G PG  G    PG  G+PG+ GI GT G  G++G  G +
Sbjct: 730 GEKGMAGGHGPDGPKGSPGPTGTPGDTG---PPGLQGMPGERGIAGTPGPKGDRGGVGEK 786

Query: 248 GNRGKSGINGV 258
           G  G +G +G 
Sbjct: 787 GAEGTAGNDGA 797



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 76/170 (44%), Gaps = 42/170 (24%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------------------GPQGI 153
             GQ+G +G  G+   +GERG  G PG  G P                        GP G 
Sbjct: 990  TGQRGIVGMPGQ---RGERGMPGLPGPAGTPGKVGPTGGPGDKGPPGPVGPSGSNGPVGE 1046

Query: 154  PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            PG E   GP G+       G PG +G  G +GD G PG  GL G  G PG PG  G PG 
Sbjct: 1047 PGPE---GPAGN------DGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGD 1097

Query: 214  NGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1098 AGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1147



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 78/172 (45%), Gaps = 8/172 (4%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A+G  G  G+ GE G  G  G PG  G  G  G RG      +PG  G+PG +G RG KG
Sbjct: 254 ARGPEGPPGKSGEDGETGRNGNPGEVGFAGSPGARG------FPGAPGLPGLKGHRGHKG 307

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G  G +G  G  G  G  G  G  G  G  G+PG+ G  G  G PG  G +G  G  G
Sbjct: 308 LEGPKGEVGATGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHGMPGKPG 367

Query: 246 PRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL--LIPPTIVGSEHI 295
           P G  G  G +G PG P +      + +  P     Q     PP  VGS+ +
Sbjct: 368 PMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGL 419



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1059 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1118

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1119 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1148



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 21/117 (17%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------G 173
           +KGE G +               G+VGPPG +G PG  G+ GP G +G+ GPQ      G
Sbjct: 815 EKGEPGPR---------------GLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPG 859

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           + G+ G+ G KGD G PG  GL G  G  G  G+ G+ G  G  G PG  G PG  G
Sbjct: 860 VKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAG 916



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 88/241 (36%), Gaps = 90/241 (37%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKR---GPKGDM 166
            G QGP GQ G  G  GE G KG+ G  G  G+ G PGP    G+PG +G R   GP G  
Sbjct: 850  GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGAT 909

Query: 167  GYPGPQGI------------------PGDEGKRGPKGDMGYPGRI--------------- 193
            G+PG  G                   PG EG  G +GD G  GR+               
Sbjct: 910  GFPGSAGRVGPPGPTGAPGPAGPLGDPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 969

Query: 194  ------------------------------GLDGRDGLPGEPGLDGIPGR---------- 213
                                          G  G  G+PG PG  G PG+          
Sbjct: 970  GDPGEDGQSGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGGPGDK 1029

Query: 214  -----------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                       NG  G PG +G  G DG PG +G  GE+G  G  G  G  G  G PGTP
Sbjct: 1030 GPPGPVGPSGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTP 1089

Query: 263  A 263
             
Sbjct: 1090 G 1090



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 78/193 (40%), Gaps = 63/193 (32%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 827  PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 886

Query: 171  PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
            P G   +PG +G RG   P G  G+PG  G                      +G  GL G
Sbjct: 887  PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPLGDPGKEGPPGLRG 946

Query: 204  EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
            +PG  G                                      G+ G+ G+PG+ G  G
Sbjct: 947  DPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQSGPDGPPGPAGTTGQRGIVGMPGQRGERG 1006

Query: 228  KDGIPGTNGTNGE 240
              G+PG  GT G+
Sbjct: 1007 MPGLPGPAGTPGK 1019


>gi|326931925|ref|XP_003212074.1| PREDICTED: collagen alpha-3(IX) chain-like [Meleagris gallopavo]
          Length = 675

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 86/205 (41%), Positives = 107/205 (52%), Gaps = 15/205 (7%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQG 152
           L    G   S  E   PG  G  G  GE G  G++G+ G+RG    +GA G VG PGP G
Sbjct: 334 LPGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDVGIPGDRGLPGPRGATGPVGLPGPIG 393

Query: 153 IPGDEGKRGPKG---DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
            PG  G +GPKG   + G PGP GI G+ G RGP G +G  G  G+ G DGLPG+ G  G
Sbjct: 394 APGVRGFQGPKGASGEPGLPGPTGIRGESGDRGPTGVIGAKGNQGIAGADGLPGDKGELG 453

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---TGPRGNRGKSGINGV---PGTPA 263
             G  G  G PGK G  G  G  G NGT G  G+    GP G++G+ G+ G+   PG P 
Sbjct: 454 PFGPPGQKGEPGKRGELGPKGAQGPNGTAGAPGIPGHPGPMGHQGEQGVPGITGKPGPPG 513

Query: 264 ICAYK---RESCSLLPNSETSQLLI 285
             A +   RE C  + N + +QL  
Sbjct: 514 KEASEQHIRELCGEMINDQIAQLAA 538



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 74/167 (44%), Gaps = 39/167 (23%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDE-------------------------------- 178
           QGI G +G RGPKGD G PGP+G PG                                  
Sbjct: 263 QGIKGPQGFRGPKGDTGRPGPKGNPGARGLIGEPGMPGKDGRDGAPGLDGEKGDAARMGA 322

Query: 179 -GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            G++GP G  G PGR G+ G  G PG PG  G  G +G  GIPG  G+PG  G+PG  G 
Sbjct: 323 PGEKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDVGIPGDRGLPGPRGA 382

Query: 238 NGEKGMTGP------RGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
            G  G+ GP      RG +G  G +G PG P     + ES    P  
Sbjct: 383 TGPVGLPGPIGAPGVRGFQGPKGASGEPGLPGPTGIRGESGDRGPTG 429



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 77/139 (55%), Gaps = 3/139 (2%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           GE G    MG  GE+G  G PG+   PG  GI G +G+ G  G+MG  GP G PG  G  
Sbjct: 312 GEKGDAARMGAPGEKGPNGLPGL---PGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDV 368

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           G  GD G PG  G  G  GLPG  G  G+ G  G  G  G+ GLPG  GI G +G  G  
Sbjct: 369 GIPGDRGLPGPRGATGPVGLPGPIGAPGVRGFQGPKGASGEPGLPGPTGIRGESGDRGPT 428

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G+ G +GN+G +G +G+PG
Sbjct: 429 GVIGAKGNQGIAGADGLPG 447



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 93/239 (38%), Gaps = 77/239 (32%)

Query: 79  STHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE 138
           S    P   + A     +    G      E  P    GP GQKGE G +GE+G KG +G 
Sbjct: 422 SGDRGPTGVIGAKGNQGIAGADGLPGDKGELGP---FGPPGQKGEPGKRGELGPKGAQGP 478

Query: 139 ---KGAPGVVGPPGP------QGIPGDEGKRGPKG------------------------- 164
               GAPG+ G PGP      QG+PG  GK GP G                         
Sbjct: 479 NGTAGAPGIPGHPGPMGHQGEQGVPGITGKPGPPGKEASEQHIRELCGEMINDQIAQLAA 538

Query: 165 ---------------------------DMGYPGPQGIP------GDEGKRGPKGDMGY-- 189
                                       +G+PG +G P      G+ G  GP+GD G   
Sbjct: 539 NLRKPLSPGMTGRPGPAGPPGPPGATGSVGHPGARGPPGYRGPTGELGDPGPRGDTGEKG 598

Query: 190 ---PGRIGLDGRDGLPGEPGLDGIPG--RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
              P   G+DG DG  G  GL G+PG  +NG DG  G+ GLPG  G PG  G  G  G+
Sbjct: 599 DKGPAGQGIDGPDGDQGPQGLPGVPGISKNGRDGAQGEPGLPGDPGTPGAVGAQGTPGI 657



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 60/128 (46%), Gaps = 39/128 (30%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G PG  GPPG          RGP G++G PGP+G  G++G +GP G        G+DG D
Sbjct: 568 GHPGARGPPG---------YRGPTGELGDPGPRGDTGEKGDKGPAGQ-------GIDGPD 611

Query: 200 GLPGEPGLDGIPG--RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  GL G+PG  +NG DG  G+ GLPG  G PG  G  G                  
Sbjct: 612 GDQGPQGLPGVPGISKNGRDGAQGEPGLPGDPGTPGAVGAQG------------------ 653

Query: 258 VPGTPAIC 265
              TP IC
Sbjct: 654 ---TPGIC 658


>gi|195342632|ref|XP_002037904.1| GM18517 [Drosophila sechellia]
 gi|194132754|gb|EDW54322.1| GM18517 [Drosophila sechellia]
          Length = 1776

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 114/234 (48%), Gaps = 24/234 (10%)

Query: 43   DKGDIFDNSVPQTPHVEFVP-----PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLV 97
            +KG +    +P TP ++ +P     P        R  + +      P +          V
Sbjct: 1135 EKGSVGAPGIPGTPGMDGLPGAAGTPGAVGYPGHRGDKGEPGLSGLPGL----KGETGPV 1190

Query: 98   AMQGFCNSTKEYCPPGLQG--------PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG 149
             +QGF  +       G++G        P+  +G+ G++GE G  GE+G++G  G+ GP G
Sbjct: 1191 GLQGFIGAPGPKGERGIRGQPGLPATIPVDFRGDKGSQGERGYTGEKGDQGERGLSGPVG 1250

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
              G  GD G +GP G  G     GIPG +G  GP+G++GYPG   + G  GLPG PG + 
Sbjct: 1251 DAGAKGDRGLQGPPGASGL---NGIPGAKGDTGPRGEIGYPGAT-IKGEKGLPGRPGRN- 1305

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              GR G  G PG  G  G  G+PG  G  G  G+ GP G++G+ G+ G PG P 
Sbjct: 1306 --GRQGFIGAPGTIGERGLPGLPGEPGLVGLPGLIGPAGSKGERGLAGSPGQPG 1357



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 95/165 (57%), Gaps = 20/165 (12%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------VGPPGPQGIPGDEGKRGPK 163
            GL G  G++G  G  GE G +G  G  GAPG+          G PGP G+ GD G   P 
Sbjct: 1021 GLAGAPGKQGLDGMPGEKGSQGFSGLDGAPGLPGDASEKGQKGEPGPSGLRGDTG---PA 1077

Query: 164  GDMGYPGPQGIPG--DEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGI---PGRNG 215
            G  G+PG +G+PG    G+ GP+G+ G  GR G+DGRDG+    GE GL G+   PG  G
Sbjct: 1078 GQPGWPGEKGMPGLAVHGRPGPQGEKGDQGRSGIDGRDGINGDKGEQGLQGVWGQPGEKG 1137

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G PG  G PG DG+PG  GT G  G  G RG++G+ G++G+PG
Sbjct: 1138 SVGAPGIPGTPGMDGLPGAAGTPGAVGYPGHRGDKGEPGLSGLPG 1182



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 97/207 (46%), Gaps = 51/207 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGD 165
            PGL GP G KGE G  G  G  G+ G  G PG+ G  GPQG  G+      EG++G KGD
Sbjct: 1335 PGLIGPAGSKGERGLAGSPGQPGQDGFPGGPGLKGDTGPQGFKGERGLNGFEGQKGDKGD 1394

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRI------------------GLDGRDGLPGEPGL 207
             G  GP G+PG  G+   KGD GYPG +                  G DGRDG PG+PG 
Sbjct: 1395 RGLQGPSGLPGLNGQ---KGDTGYPGLVGNEGPVGAPGERGFTGPKGHDGRDGTPGQPGQ 1451

Query: 208  DGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM--------- 243
             G PG               RNG  G PG+ G  G  GI G  G  GE+G+         
Sbjct: 1452 KGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGERGLIGETGNVGR 1511

Query: 244  TGPRGNRGKSGINGVPGTPAICAYKRE 270
             GP+G+RG+ G  G  G   +   K E
Sbjct: 1512 QGPKGDRGEQGERGYEGAIGLIGQKGE 1538



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 114/234 (48%), Gaps = 31/234 (13%)

Query: 86  VWLNAYSRIPLVAMQG---FCNSTKEYCPPGLQGPIGQKGEIGAKG----EMGVKGERGE 138
              + Y  IP  +++G   F          G  GP G++GE G+      +M  KG +GE
Sbjct: 703 AGRDGYPGIPGQSIKGEPGFHGRDGAKGDKGSLGPSGERGEPGSCALDEIKMPAKGNKGE 762

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            G  G+ GPPG  G PG+ G  G KG+ G  GP G+ G  G  GP+G+ G  G +G+ G 
Sbjct: 763 PGQTGMPGPPGEYGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGN 822

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGL--PGKDGIPGTNGTNGEKGMTGPR--------- 247
              PG+ GL GIPGRNG  G  G+ G+  PG  G PG NG  GEKG  GP          
Sbjct: 823 ---PGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGLPGAD 879

Query: 248 ------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHI 295
                 G+RG +G+ GV G P I   K +   + P    + +  PP + G + +
Sbjct: 880 GSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGP----AGVAGPPGVPGIDGV 929



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 94/180 (52%), Gaps = 26/180 (14%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPGP--- 171
             G+KG+ G +G  G  G+ G KG  G+ GPPG  G   IPG +G  GP+G++GYPG    
Sbjct: 1234 TGEKGDQGERGLSGPVGDAGAKGDRGLQGPPGASGLNGIPGAKGDTGPRGEIGYPGATIK 1293

Query: 172  --QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG----------------- 212
              +G+PG  G+ G +G +G PG IG  G  GLPGEPGL G+PG                 
Sbjct: 1294 GEKGLPGRPGRNGRQGFIGAPGTIGERGLPGLPGEPGLVGLPGLIGPAGSKGERGLAGSP 1353

Query: 213  -RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             + G DG PG  GL G  G  G  G  G  G  G +G++G  G+ G  G P +   K ++
Sbjct: 1354 GQPGQDGFPGGPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLNGQKGDT 1413



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 104/212 (49%), Gaps = 55/212 (25%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQ-----------------------KGEIGAKGEMGVKG 134
             + G      E  P GLQG IG                        +G+ G++GE G  G
Sbjct: 1176 GLSGLPGLKGETGPVGLQGFIGAPGPKGERGIRGQPGLPATIPVDFRGDKGSQGERGYTG 1235

Query: 135  ERGE---------------KGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYPGP----- 171
            E+G+               KG  G+ GPPG     GIPG +G  GP+G++GYPG      
Sbjct: 1236 EKGDQGERGLSGPVGDAGAKGDRGLQGPPGASGLNGIPGAKGDTGPRGEIGYPGATIKGE 1295

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP------GRNGMDGIPGKDGL 225
            +G+PG  G+ G +G +G PG IG  G  GLPGEPGL G+P      G  G  G+ G  G 
Sbjct: 1296 KGLPGRPGRNGRQGFIGAPGTIGERGLPGLPGEPGLVGLPGLIGPAGSKGERGLAGSPGQ 1355

Query: 226  PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG+DG PG  G    KG TGP+G +G+ G+NG
Sbjct: 1356 PGQDGFPGGPGL---KGDTGPQGFKGERGLNG 1384



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 98/206 (47%), Gaps = 35/206 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEK------GAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG +G  G+ G  G KG+MG+KG+ G K      G  G  G  G  G+PG +G RGP G+
Sbjct: 538 PGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLAGVPGKDGARGPPGE 597

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------------GLDGI 210
            GYPG +G  G  G+ GP G+ G  GR GL G  G PG+P               G  G 
Sbjct: 598 RGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPVKGEKGYPGA 657

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR---GKSGINGVPGTPAIC-- 265
           PG  G+ G  G DG  G  G  G  G  G+KG++G  GN    G++G +G PG P     
Sbjct: 658 PGAKGVKGFRGSDGQSGSPGPKGEFGFKGDKGLSGAPGNDGTPGRAGRDGYPGIPGQSIK 717

Query: 266 ---------AYKRESCSLLPNSETSQ 282
                      K +  SL P+ E  +
Sbjct: 718 GEPGFHGRDGAKGDKGSLGPSGERGE 743



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 88/182 (48%), Gaps = 17/182 (9%)

Query: 95  PLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-- 152
           P+   +G+  +       G +G  GQ G  G KGE G KG++G  GAPG  G PG  G  
Sbjct: 647 PVKGEKGYPGAPGAKGVKGFRGSDGQSGSPGPKGEFGFKGDKGLSGAPGNDGTPGRAGRD 706

Query: 153 ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD-------GRDGL 201
               IPG       KG+ G+ G  G  GD+G  GP G+ G PG   LD       G  G 
Sbjct: 707 GYPGIPGQS----IKGEPGFHGRDGAKGDKGSLGPSGERGEPGSCALDEIKMPAKGNKGE 762

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG+ G+ G PG  G  G  G  GL G  G  G  G  G +G+ GPRG +G  G  GVPG 
Sbjct: 763 PGQTGMPGPPGEYGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGN 822

Query: 262 PA 263
           P 
Sbjct: 823 PG 824



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/151 (45%), Positives = 84/151 (55%), Gaps = 18/151 (11%)

Query: 111 PPGLQGPIGQKGE---------IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
           PPGL G  G+KG+          GA G +G  G+RG+ G PGV G P   GI G++G  G
Sbjct: 854 PPGLNGLQGEKGDRGPTGPIGLPGADGSVGYPGDRGDAGLPGVSGRP---GIVGEKGDVG 910

Query: 162 PKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           P G  G  GP G+PG +G R   G KG+ G PG +G+ G  G  G PG DG  G  G+ G
Sbjct: 911 PIGPAGVAGPPGVPGIDGVRGLDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTG 970

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PGK    G  GIPG +G  G+KG TG  GN
Sbjct: 971 APGKR---GPAGIPGVSGAKGDKGATGLTGN 998



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 94/194 (48%), Gaps = 25/194 (12%)

Query: 112 PGLQGPIG---QKGEIGAKGEMGVKGER------GEKGAPGVVGPPGPQGIPGDEGKRGP 162
           PG++GP G   QKG+ G  G+ G KGER      G+ G PGV GP G  G PG  GK G 
Sbjct: 105 PGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGC 164

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            GD+G  G +G+ G  G R      GY G++G  G  G P +   D   G  G  G  G 
Sbjct: 165 DGDVGLSGLEGLSGMPGPR------GYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGT 218

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING----------VPGTPAICAYKRESC 272
            GL G  G+PG  G  G+ G  G +G RG+ G+ G           PG P +   K E  
Sbjct: 219 AGLAGPQGLPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGMKGEKGEPA 278

Query: 273 SLLPNSETSQLLIP 286
           S LP+  T  ++ P
Sbjct: 279 SSLPSKPTHTVMGP 292



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 83/169 (49%), Gaps = 30/169 (17%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPKGDMGYPGPQGIP 175
           G  G  G  G  G++G+ G PG  G  G  GI GD G +      GPKGD G  G  G+P
Sbjct: 527 GRPGTPGTAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLAGVP 586

Query: 176 GDEGKRGPKGDMGYPGRIGLD---GRDGLPGEPGLDGIPGRNGMDGIPGK---------- 222
           G +G RGP G+ GYPG  G D   G+ G PGE G DG  G  G  G PGK          
Sbjct: 587 GKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIE 646

Query: 223 --------DGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
                    G PG  G+ G  G++G+ G  GP+G    +G  G++G PG
Sbjct: 647 PVKGEKGYPGAPGAKGVKGFRGSDGQSGSPGPKGEFGFKGDKGLSGAPG 695



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 96/195 (49%), Gaps = 50/195 (25%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGE------RGEKGAP---GVVGPPGPQGIPGDEGKRGPK 163
           G+ GP G  G++G+KGE G   +      +GEKG P   G  G  GPQG+PG++G+RG  
Sbjct: 178 GMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGLPGEKGERGDS 237

Query: 164 GDMGYPGPQ-------------------GIPGDEGKR----------------GPKGDMG 188
           G  G  GP+                   G PG +G++                GP+GDMG
Sbjct: 238 GPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGMKGEKGEPASSLPSKPTHTVMGPRGDMG 297

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G  GL GR    GEPG +G  G NG     G+ GLPG  G  G  G  G  G TG +G
Sbjct: 298 QKGEPGLVGRK---GEPGPEGDTGLNGQK---GEKGLPGGPGDRGRQGNFGPPGSTGQKG 351

Query: 249 NRGKSGINGVPGTPA 263
           +RG+ G+NG+PG P 
Sbjct: 352 DRGEPGLNGLPGKPG 366



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 86/169 (50%), Gaps = 30/169 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++G  G KGE G+ G +G+ G +G++GAPG  GP G  G+ G  GKRGP G        
Sbjct: 928  GVRGLDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAG-------- 979

Query: 173  GIPGDEGKRGPKGDMGYPGR---------------IGLDGRDGL---PGEPGLDGIPGRN 214
             IPG  G +G KG  G  G                +G+ G  GL   PG+ GLDG+PG  
Sbjct: 980  -IPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGKQGLDGMPGEK 1038

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G DG P   G+PG     G+KG  GP G RG +G  G PG P 
Sbjct: 1039 GSQGFSGLDGAP---GLPGDASEKGQKGEPGPSGLRGDTGPAGQPGWPG 1084



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 90/173 (52%), Gaps = 26/173 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG---------EKGAPGVV--GPPGPQGIPGDEGKR 160
            PGL G   +KG+ G  G  G++G+ G         EKG PG+   G PGPQG  GD+G+ 
Sbjct: 1050 PGLPGDASEKGQKGEPGPSGLRGDTGPAGQPGWPGEKGMPGLAVHGRPGPQGEKGDQGRS 1109

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G  G        GI GD+G++G +G  G PG  G  G  G+PG PG+DG+PG  G  G  
Sbjct: 1110 GIDGR------DGINGDKGEQGLQGVWGQPGEKGSVGAPGIPGTPGMDGLPGAAGTPGAV 1163

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGP---------RGNRGKSGINGVPGTPAI 264
            G  G  G  G PG +G  G KG TGP          G +G+ GI G PG PA 
Sbjct: 1164 GYPGHRGDKGEPGLSGLPGLKGETGPVGLQGFIGAPGPKGERGIRGQPGLPAT 1216



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 80/165 (48%), Gaps = 37/165 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL   +G+KGE G +G+ G+ G++GEKG PG  G  G QG  G  G  G KGD G PG 
Sbjct: 302 PGL---VGRKGEPGPEGDTGLNGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGL 358

Query: 172 QGIPGDEGKRGPKGD----------------------------------MGYPGRIGLDG 197
            G+PG  G+RG  G                                   +G PG  GL G
Sbjct: 359 NGLPGKPGQRGEPGRAGATGQPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGTPGPQGLSG 418

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            DGLPG  G +G  G  G+ G PG +G PGK G  GT G +G KG
Sbjct: 419 ADGLPGSQGYNGQKGGAGLPGRPGNEGPPGKKGDKGTAGLDGPKG 463



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 98/197 (49%), Gaps = 29/197 (14%)

Query: 93  RIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM------------GVKGERGEKG 140
           ++P    +G    T    PPG  G  G++G  G KG              G+ G RGEKG
Sbjct: 753 KMPAKGNKGEPGQTGMPGPPGEYGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKG 812

Query: 141 APGVVGPPGP------QGIPGDEGKRGPKGDMG--YPGPQGIPGDEGKRGPKGDMGYPGR 192
             G VG PG       +GIPG  G+ GP+G+ G   PGP G PG  G +G KGD G  G 
Sbjct: 813 NQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGP 872

Query: 193 IGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
           IGL G D   G PG+ G  G+PG +G  GI G+       G  G  G PG  G +G +G+
Sbjct: 873 IGLPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGL 932

Query: 244 TGPRGNRGKSGINGVPG 260
            G +G  G  G+ G+PG
Sbjct: 933 DGAKGEPGSPGLVGMPG 949



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 86/152 (56%), Gaps = 3/152 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G++G IGA G +G +G  G  G PG+VG PG  G  G +G+RG  G  G PG 
Sbjct: 1299 PGRPGRNGRQGFIGAPGTIGERGLPGLPGEPGLVGLPGLIGPAGSKGERGLAGSPGQPGQ 1358

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGK 228
             G PG  G +G  G  G+ G  GL+G +G  G+ G  G+ G +G+ G+ G+    G PG 
Sbjct: 1359 DGFPGGPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLNGQKGDTGYPGL 1418

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G  GE+G TGP+G+ G+ G  G PG
Sbjct: 1419 VGNEGPVGAPGERGFTGPKGHDGRDGTPGQPG 1450



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 79/173 (45%), Gaps = 34/173 (19%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           MG +G+ G+KG PG+VG  G  G  GD G  G KG+ G PG  G  G +G  GP G  G 
Sbjct: 290 MGPRGDMGQKGEPGLVGRKGEPGPEGDTGLNGQKGEKGLPGGPGDRGRQGNFGPPGSTGQ 349

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMD-------------------------------G 218
            G  G  G +GLPG+PG  G PGR G                                 G
Sbjct: 350 KGDRGEPGLNGLPGKPGQRGEPGRAGATGQPGLLGPPGPPGGGRGTPGPPGPKGPRGYVG 409

Query: 219 IPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAICAYK 268
            PG  GL G DG+PG+ G NG+K   G+ G  GN G  G  G  GT  +   K
Sbjct: 410 TPGPQGLSGADGLPGSQGYNGQKGGAGLPGRPGNEGPPGKKGDKGTAGLDGPK 462



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 82/153 (53%), Gaps = 17/153 (11%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
            L G  G +G  GA G+ G+ G  GEKG+ G  G  G  G+PGD  ++G KG+   PGP G
Sbjct: 1013 LMGIKGDQGLAGAPGKQGLDGMPGEKGSQGFSGLDGAPGLPGDASEKGQKGE---PGPSG 1069

Query: 174  IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL--DGIPGRNGMDGIPGKDGLPGKDGI 231
            + GD G   P G  G+PG  G+         PGL   G PG  G  G  G+ G+ G+DGI
Sbjct: 1070 LRGDTG---PAGQPGWPGEKGM---------PGLAVHGRPGPQGEKGDQGRSGIDGRDGI 1117

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G  G  G +G+ G  G +G  G  G+PGTP +
Sbjct: 1118 NGDKGEQGLQGVWGQPGEKGSVGAPGIPGTPGM 1150



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 90/185 (48%), Gaps = 18/185 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +G  G  G  G  G +G KG+ G  G  GV GPPG  GI G  G  G KG+ G PG 
Sbjct: 885  PGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGLDGAKGEPGSPGL 944

Query: 172  QGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD----- 223
             G+PG++G RG  G+    G+ G  G  G+ G  G PG+ G  G  G  G+ G D     
Sbjct: 945  VGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGG 1004

Query: 224  ----------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
                      G+ G  G+ G  G  G  GM G +G++G SG++G PG P   + K +   
Sbjct: 1005 RGPPGAPGLMGIKGDQGLAGAPGKQGLDGMPGEKGSQGFSGLDGAPGLPGDASEKGQKGE 1064

Query: 274  LLPNS 278
              P+ 
Sbjct: 1065 PGPSG 1069



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 95/203 (46%), Gaps = 52/203 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPG--VVGPPGPQGIP 154
           PG +GP G+KG+ G  G  G KG               ++G+ G PG  + G  G  GIP
Sbjct: 441 PGNEGPPGKKGDKGTAGLDGPKGSIGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIP 500

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDE--GKRGPKGDMGYPGRIGLDGRDGLPGEPGL----- 207
           G  G +G KG+ G+ G  G PGD   G+ G  G  G PG+ G  GR   PG PG      
Sbjct: 501 GYAGLKGSKGERGFKGNAGAPGDSKLGRPGTPGTAGAPGQKGDAGR---PGTPGQKGDMG 557

Query: 208 ----------------DGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRG 248
                            G  G +G+ G+PGKDG    PG+ G PG  G +G  G TGP G
Sbjct: 558 IKGDVGGKCSSCRAGPKGDKGTSGLAGVPGKDGARGPPGERGYPGERGHDGINGQTGPPG 617

Query: 249 NRGKSGINGVPGT------PAIC 265
            +G+ G  G+PG       PA+C
Sbjct: 618 EKGEDGRTGLPGATGEPGKPALC 640



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 88/188 (46%), Gaps = 36/188 (19%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGPPG 149
           + G C+S    C  G +G  G  G  G  G+ G +G  GE+G P         G  GPPG
Sbjct: 562 VGGKCSS----CRAGPKGDKGTSGLAGVPGKDGARGPPGERGYPGERGHDGINGQTGPPG 617

Query: 150 PQ------GIPGDEGKRGP------------KGDMGYPGPQGIPGDEGKRGPKGDMGYP- 190
            +      G+PG  G+ G             KG+ GYPG  G  G +G RG  G  G P 
Sbjct: 618 EKGEDGRTGLPGATGEPGKPALCDLSLIEPVKGEKGYPGAPGAKGVKGFRGSDGQSGSPG 677

Query: 191 --GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG--LPGKDGIPGTNGTNGEKGMTGP 246
             G  G  G  GL G PG DG PGR G DG PG  G  + G+ G  G +G  G+KG  GP
Sbjct: 678 PKGEFGFKGDKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKGDKGSLGP 737

Query: 247 RGNRGKSG 254
            G RG+ G
Sbjct: 738 SGERGEPG 745



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 76/143 (53%), Gaps = 18/143 (12%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G KGE G +G  G  GE+G  GAPG+ G PG  G+PG  G     G +GYPG        
Sbjct: 1119 GDKGEQGLQGVWGQPGEKGSVGAPGIPGTPGMDGLPGAAGT---PGAVGYPG-------- 1167

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP----GT 234
              RG KG+ G  G  GL G  G  G  G  G PG  G  GI G+ GLP    IP    G 
Sbjct: 1168 -HRGDKGEPGLSGLPGLKGETGPVGLQGFIGAPGPKGERGIRGQPGLPAT--IPVDFRGD 1224

Query: 235  NGTNGEKGMTGPRGNRGKSGING 257
             G+ GE+G TG +G++G+ G++G
Sbjct: 1225 KGSQGERGYTGEKGDQGERGLSG 1247



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 92/195 (47%), Gaps = 46/195 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---KGDMGY 168
            PG  G  G  G  G  G +G  G RG+KG PG+       G+PG +G+ GP   +G +G 
Sbjct: 1145 PGTPGMDGLPGAAGTPGAVGYPGHRGDKGEPGL------SGLPGLKGETGPVGLQGFIGA 1198

Query: 169  PGPQG-------------IP-------GDEGKR---GPKGDMGYPGRIGLDGRDGLPGEP 205
            PGP+G             IP       G +G+R   G KGD G  G  G  G  G  G+ 
Sbjct: 1199 PGPKGERGIRGQPGLPATIPVDFRGDKGSQGERGYTGEKGDQGERGLSGPVGDAGAKGDR 1258

Query: 206  GLDGIPGRNGMDGIPGKDG--------------LPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            GL G PG +G++GIPG  G              + G+ G+PG  G NG +G  G  G  G
Sbjct: 1259 GLQGPPGASGLNGIPGAKGDTGPRGEIGYPGATIKGEKGLPGRPGRNGRQGFIGAPGTIG 1318

Query: 252  KSGINGVPGTPAICA 266
            + G+ G+PG P +  
Sbjct: 1319 ERGLPGLPGEPGLVG 1333



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 64/113 (56%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           +G+PG  G  G KG+MG+PG +G  GD+G++G  G  G  G  G  G  GL G+ G+ G+
Sbjct: 87  RGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGVPGV 146

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G PG +G  G DG  G +G  G  GM GPRG  G+ G  G  G PA
Sbjct: 147 QGPAGNPGAPGINGKDGCDGDVGLSGLEGLSGMPGPRGYAGQLGSKGEKGEPA 199



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 84/180 (46%), Gaps = 42/180 (23%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------ 172
           G +G  GA G  G +G  G+KG  G+ G PG +G PG   K+G KG  G  GP+      
Sbjct: 412 GPQGLSGADGLPGSQGYNGQKGGAGLPGRPGNEGPPG---KKGDKGTAGLDGPKGSIGPI 468

Query: 173 ---------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--G 215
                          G+PG  G +G KGD G PG  GL G  G  G  G  G PG +  G
Sbjct: 469 GHPGPPGPEGQKGDAGLPG-YGIQGSKGDAGIPGYAGLKGSKGERGFKGNAGAPGDSKLG 527

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKG---------------MTGPRGNRGKSGINGVPG 260
             G PG  G PG+ G  G  GT G+KG                 GP+G++G SG+ GVPG
Sbjct: 528 RPGTPGTAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLAGVPG 587


>gi|16758080|ref|NP_445808.1| collagen alpha-2(I) chain precursor [Rattus norvegicus]
 gi|19855071|sp|P02466.3|CO1A2_RAT RecName: Full=Collagen alpha-2(I) chain; AltName: Full=Alpha-2 type
           I collagen; Flags: Precursor
 gi|5305687|gb|AAD41775.1|AF121217_1 pro-alpha-2(I) collagen [Rattus norvegicus]
          Length = 1372

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 90/178 (50%), Gaps = 21/178 (11%)

Query: 112 PGLQGPIGQKGEIGAKG------------EMGVKGERGEKGAPGVVGPPG---PQGIPGD 156
           PG  GP G +GE G  G              G+ G +G  G PGV G PG   P+GIPG 
Sbjct: 279 PGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGP 338

Query: 157 ---EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGI 210
               G  GP+G +G PGP G  G+ G +G  G  G    PG  G +G+ G PGEPG  G 
Sbjct: 339 VGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGP 398

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G+ G PG  GLPG DG  G  G  G +G TGP G RG +G  G PG P +   +
Sbjct: 399 AGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGPR 456



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 92/209 (44%), Gaps = 36/209 (17%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG------EMGVKGERGEKGAPGVVGPPG 149
              + G   +     P G+ GP+G  G  G +G        G KGE G KG PG  G  G
Sbjct: 317 ATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQG 376

Query: 150 PQGIPGDEGKR------------GPKGDMGYPGPQGIPGDEGK----------------- 180
           P G  G+EGKR            GP G  G PG +G+PG +G+                 
Sbjct: 377 PPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAG 436

Query: 181 -RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            RGP GD G PG  GL G  GLPG PG  G  G+ G  G+PG DG PG  G  G  G  G
Sbjct: 437 VRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAG 496

Query: 240 EKGMTGPRGNRGKSGINGVPGTPAICAYK 268
             G  GP+G  G  G  G  G P +   +
Sbjct: 497 NIGFPGPKGPSGDPGKPGEKGHPGLAGAR 525



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 80/148 (54%), Gaps = 15/148 (10%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G  G +GA G  G +G  GE G PG  GP G +G  G  GK    G+ G+PG  
Sbjct: 100 GLMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGK---AGEDGHPGKP 156

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKD 229
           G PG+ G  GP+G  G+PG  GL         PG  GI G NG+DG+   PG  G+ G+ 
Sbjct: 157 GRPGERGVVGPQGARGFPGTPGL---------PGFKGIRGHNGLDGLKGQPGAQGVKGEP 207

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G PG NGT G+ G  G  G RG+ G  G
Sbjct: 208 GAPGENGTPGQAGARGLPGERGRVGAPG 235



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 82/160 (51%), Gaps = 15/160 (9%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G  GE G +G  G  G  G  G PG+ G PG +G+PG +G+    G MG PG +
Sbjct: 373 GAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGR---AGVMGPPGNR 429

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------LDGIPGRNGMDGIP 220
           G  G  G RGP GD G PG  GL G  GLPG PG            L GI GR G  G  
Sbjct: 430 GSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPA 489

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G  G PG  G +G+ G  G +G+ G +G  G PG
Sbjct: 490 GPRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPG 529



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 93/185 (50%), Gaps = 9/185 (4%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G   S     P G +GP+G  G  G  G +G  G RGE G    +G PGP+G  G
Sbjct: 452 LMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAG---NIGFPGPKGPSG 508

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D GK G KG  G  G +G PG +G  G +G  G  G  G  G  G  G PG  G+PG +G
Sbjct: 509 DPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSG 568

Query: 216 MDG---IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS---GINGVPGTPAICAYKR 269
             G    PG+ GLPG+ G+PG  G  GE+G  G  G  G S   GI G  G P     K 
Sbjct: 569 TAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGIRGPSGAPGPDGNKG 628

Query: 270 ESCSL 274
           E+ ++
Sbjct: 629 EAGAV 633



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 80/153 (52%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G   +     P G QGP G+ GE G  G  G +G  G  G  G  G PG  G PG
Sbjct: 101 LMGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKPGRPG 160

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           + G  GP+G  G+PG  G+PG +G RG  G  G  G+ G  G  G PG PG +G PG+ G
Sbjct: 161 ERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGENGTPGQAG 220

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+PG+ G  G  G  G  G++G  G  GP G
Sbjct: 221 ARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG 253



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 78/149 (52%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ GP G +G  G  G  G  G+ G  G PG++GP G  G PG+ G  G +G +G PG  
Sbjct: 421 GVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGID 480

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG  G  GP+G+ G  G  G  G  G PG+PG  G PG  G  G PG DG  G  G P
Sbjct: 481 GRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPP 540

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G KG  GP G  G  G+ G  GT
Sbjct: 541 GPQGVQGGKGEQGPAGPPGFQGLPGPSGT 569



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 84/172 (48%), Gaps = 36/172 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP+G+ GEIGA G  G  GE+G  G PG  GPPG           GP+G +G PG  
Sbjct: 829 GDQGPVGRTGEIGASGPPGFAGEKGPSGEPGTTGPPG---------TAGPQGLLGAPGIL 879

Query: 173 GIPGDEGKRGP---KGDMGYPGRIGLD---------------GRDGLPGE------PGLD 208
           G+PG  G+RG     G +G PG +G+                G +G PGE      PG D
Sbjct: 880 GLPGSRGERGQPGIAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSD 939

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGING 257
           G PGR+G  G  G+ G PG  G  G  G  G  G  GP    GNRG+ G  G
Sbjct: 940 GPPGRDGQPGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAG 991



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 70/130 (53%), Gaps = 12/130 (9%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGP---KGDMGYPGRIGLDGR 198
           PGP G+    G RGP G +G PGPQG       PG+ G+ GP   +G  G PG+ G DG 
Sbjct: 96  PGPMGL---MGPRGPPGAVGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGH 152

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G PG PG  G+ G  G  G PG  GLPG  GI G NG +G KG  G +G +G+ G  G 
Sbjct: 153 PGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGE 212

Query: 259 PGTPAICAYK 268
            GTP     +
Sbjct: 213 NGTPGQAGAR 222



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 96/200 (48%), Gaps = 30/200 (15%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGP----- 162
           P G++GP    G+ G  GE G+ G RG  G+PG VGP G   P G+PG +G+ GP     
Sbjct: 434 PAGVRGP---NGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAG 490

Query: 163 ----KGDMGYPGPQGIPGDEGKRGPKGD------MGYPGRIGLDGRDGLPGEPGLDGIPG 212
                G++G+PGP+G  GD GK G KG        G PG  G +G  G PG  G+ G  G
Sbjct: 491 PRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKG 550

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRGNRGKSGINGVPGTPA 263
             G  G PG  GLPG  G  G  G  GE+G+          GPRG RG  G +G  G   
Sbjct: 551 EQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSG 610

Query: 264 ICAYKRESCSLLPNSETSQL 283
               +  S +  P+    + 
Sbjct: 611 PIGIRGPSGAPGPDGNKGEA 630



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 85/181 (46%), Gaps = 24/181 (13%)

Query: 98  AMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            +QG         PPG QG   P G  GE+G  GE G+ GE G    PG  GP G +G P
Sbjct: 544 GVQGGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFG---LPGPAGPRGERGPP 600

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---- 210
           G+ G  GP G +G  GP G PG +G +G  G +G PG  G  G  GLPGE G  GI    
Sbjct: 601 GESGAAGPSGPIGIRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGK 660

Query: 211 --------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                         PGR+G  G PG  G PG  G  G  G  G  G +GP G RG  G  
Sbjct: 661 GEKGETGLRGEIGNPGRDGARGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGER 720

Query: 257 G 257
           G
Sbjct: 721 G 721



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 90/199 (45%), Gaps = 39/199 (19%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKG---------------EIGAKGEMGVKGERGEKGAPGVV 145
            G   S  E   PG+ G +G+ G                +G+ G  G  GE G  G PG  
Sbjct: 880  GLPGSRGERGQPGIAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSD 939

Query: 146  GPPGPQGIPGDEGKRG------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG----- 194
            GPPG  G PG +G+RG      P G  G PGP G  G  GK G +G+ G  G +G     
Sbjct: 940  GPPGRDGQPGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGAV 999

Query: 195  ----------LDGRDGLPGEPGLDGIPG---RNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                      + G  G PG+ G  G+PG    NG+ G+PG  GL G  G PG  G  G +
Sbjct: 1000 GPRGPSGPQGIRGDKGEPGDKGARGLPGLKGHNGLQGLPGLAGLHGDQGAPGPVGPAGPR 1059

Query: 242  GMTGPRGNRGKSGINGVPG 260
            G  GP G  GK G +G PG
Sbjct: 1060 GPAGPSGPIGKDGRSGHPG 1078



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 52/90 (57%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           +GE+G  G  G +GAPG +G PGP G  GD G+ G  G  G  GP+G PG+ G+ GP G 
Sbjct: 669 RGEIGNPGRDGARGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGP 728

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G+ G  G  G+ G  GE G  G  G NG+
Sbjct: 729 NGFAGPAGSAGQPGAKGEKGTKGPKGENGI 758



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 81/186 (43%), Gaps = 41/186 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG QG    KGE GA GE G  G+ G +G PG    VG PGP G  G +G  GP G  G 
Sbjct: 198 PGAQG---VKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG- 253

Query: 169 P-------------------GPQGIPGDEGKRGPKGDMGYPGR---------------IG 194
           P                   GP G PG  G  GP+G+ G PG                 G
Sbjct: 254 PIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTG 313

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  GLPG  G  G+PG  G+ G  G  G  G  G+ G  G  G KG TG +G  G +G
Sbjct: 314 AKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAG 373

Query: 255 INGVPG 260
             G PG
Sbjct: 374 AQGPPG 379



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 49/89 (55%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G IGA G  G  G+RGE GA G  GP GP+G PG+ G+ GP G  G+ GP
Sbjct: 675 PGRDGARGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGP 734

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            G  G  G +G KG  G  G  G+ G  G
Sbjct: 735 AGSAGQPGAKGEKGTKGPKGENGIVGPTG 763



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 79/179 (44%), Gaps = 39/179 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGDEGKR 160
           G  GP G  G+ GAKGE G KG +GE    G+VGP GP G              G  G  
Sbjct: 730 GFAGPAGSAGQPGAKGEKGTKGPKGEN---GIVGPTGPVGAAGPSGPNGPPGPAGSRGDG 786

Query: 161 GPKGDMGYPGPQG------------------IPGDEGKRGPKGDMGYPGR---IGLDGRD 199
           GP G  G+PG  G                    G EG RGP+GD G  GR   IG  G  
Sbjct: 787 GPPGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGEIGASGPP 846

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G  GE G  G PG  G  G  G  GL   PG  G+PG+ G  G+ G+ G  G  G  GI
Sbjct: 847 GFAGEKGPSGEPGTTGPPGTAGPQGLLGAPGILGLPGSRGERGQPGIAGALGEPGPLGI 905



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 60/122 (49%), Gaps = 18/122 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG  G +G  G+ G +GE G  G  G  GA G  GP GPQGI GD+G+ G KG  G PG 
Sbjct: 969  PGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDKGARGLPGL 1028

Query: 171  ---------P--------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
                     P        QG PG  G  GP+G  G  G IG DGR G PG  G  G+ G 
Sbjct: 1029 KGHNGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAGPSGPIGKDGRSGHPGPVGPAGVRGS 1088

Query: 214  NG 215
             G
Sbjct: 1089 QG 1090



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 83/198 (41%), Gaps = 54/198 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
           PG +G  G  G  G KG+ G +G +GE GAPG        G PG  G R   G +G +G 
Sbjct: 180 PGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGE------NGTPGQAGARGLPGERGRVGA 233

Query: 169 PGPQGI---------------------------------------PGDEGKRGPKGDMGY 189
           PGP G                                        PG  G  GP+G+ G 
Sbjct: 234 PGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGL 293

Query: 190 PG------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           PG        G  G +GL G  G  G+PG  G  G+PG  G+PG  G  G  G  G  G 
Sbjct: 294 PGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGE 353

Query: 244 TGPRGNRGKSGINGVPGT 261
            GP G++G++G  G PG+
Sbjct: 354 PGPAGSKGETGNKGEPGS 371


>gi|426250995|ref|XP_004019217.1| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-2(XI) chain [Ovis
           aries]
          Length = 1648

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 89/197 (45%), Gaps = 51/197 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE G +G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 646 PGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 705

Query: 172 QGIPG------------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGE--- 204
           +GI G                        D G +G +G++G PG  G DG +G  G    
Sbjct: 706 RGIKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGP 765

Query: 205 ------------------PGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGE 240
                             PGL G PGR       G  G PG  G  G  G+ G +G  GE
Sbjct: 766 TGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGE 825

Query: 241 KGMTGPRGNRGKSGING 257
           +G TGPRG RG  G  G
Sbjct: 826 RGPTGPRGQRGPRGATG 842



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 98/215 (45%), Gaps = 42/215 (19%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            M+G         P G QG +G  G+ G +G  G  G RG  G PGV G  G  G+PG  
Sbjct: 509 GMKGESGDLGPQGPRGPQGLMGPPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLP 568

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG---------YPGRIGLDGRDGLPGE---- 204
           G++G +GD G  G  G PG++G+RGP+G +G          PG  G+DG  G  G     
Sbjct: 569 GEKGHRGDTGAQGLPGPPGEDGERGPRGLLGPKGPPGASGSPGVRGMDGPHGPKGSLGPQ 628

Query: 205 -----------PGLDGIPG---------------RNGMDGIPGKDGLPG---KDGIPGTN 235
                      PG  G+PG               + G+ G+PG DG PG   K+G PGT 
Sbjct: 629 GEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTK 688

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G  G  GP G  G  GI GV G   +  +K E
Sbjct: 689 GNQGPSGPQGPLGYPGPRGIKGVDGIRGLKGHKGE 723



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 88/176 (50%), Gaps = 30/176 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGD 165
           PGL G  G +G+ GA+G  G  GE GE+G  G++GP GP G  G  G RG      PKG 
Sbjct: 565 PGLPGEKGHRGDTGAQGLPGPPGEDGERGPRGLLGPKGPPGASGSPGVRGMDGPHGPKGS 624

Query: 166 MGY------------PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGI 210
           +G             PG QG+PG +G  GP   KG  G PG  G+ G DG PG PG +G 
Sbjct: 625 LGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGP 684

Query: 211 PGRNGMD---------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PG  G           G PG  G+ G DGI G  G  GEKG  G  G +G  G+ G
Sbjct: 685 PGTKGNQGPSGPQGPLGYPGPRGIKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKG 740



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/129 (45%), Positives = 70/129 (54%), Gaps = 3/129 (2%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           RG  G  G  G PGP G PG  G +G  GD+G   PQG  G +G  GP G  G  GR G 
Sbjct: 487 RGPPGPMGYTGRPGPLGQPGSPGMKGESGDLG---PQGPRGPQGLMGPPGKAGRRGRAGA 543

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           DG  G+PGEPG+ G  G +G+ G+PG+ G  G  G  G  G  GE G  GPRG  G  G 
Sbjct: 544 DGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGPRGLLGPKGP 603

Query: 256 NGVPGTPAI 264
            G  G+P +
Sbjct: 604 PGASGSPGV 612



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 86/178 (48%), Gaps = 30/178 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+GQ G  G KGE G  G +G +G  G++GPPG             +G+PG+ G  
Sbjct: 497 GRPGPLGQPGSPGMKGESGDLGPQGPRGPQGLMGPPGKAGRRGRAGADGARGMPGEPGV- 555

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
             KGD G+ G  G+PG++G RG  G  G PG  G DG  G  G  G  G PG +G  G+ 
Sbjct: 556 --KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGPRGLLGPKGPPGASGSPGVR 613

Query: 221 GKDGLPGKDG---------------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G DG  G  G                PGT G  G +G  GP G +G  G  G+PG P 
Sbjct: 614 GMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPG 671



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/141 (44%), Positives = 79/141 (56%), Gaps = 6/141 (4%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  G+ G +G  G  G+KGE G+ G     GP GPQG+ G  GK G +G  G  G
Sbjct: 489 PPGPMGYTGRPGPLGQPGSPGMKGESGDLGP---QGPRGPQGLMGPPGKAGRRGRAGADG 545

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            +G+PG+ G    KGD G+ G  GL G  G  G+ G  G+PG  G DG  G  GL G  G
Sbjct: 546 ARGMPGEPGV---KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGPRGLLGPKG 602

Query: 231 IPGTNGTNGEKGMTGPRGNRG 251
            PG +G+ G +GM GP G +G
Sbjct: 603 PPGASGSPGVRGMDGPHGPKG 623



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 78/174 (44%), Gaps = 45/174 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVK------------------------GERGEKGAPGVVG 146
            PPG +G  G+ G  G +GE GVK                        G+RGE G PG  G
Sbjct: 1192 PPGEKGEPGESGSPGVQGEPGVKGPVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQPG 1251

Query: 147  PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------- 199
             PGP G      + GP G +G  GP G PG EG++G KG  G  GR G  G+        
Sbjct: 1252 SPGPTG------ENGPPGPLGKRGPAGTPGPEGRQGEKGAKGQQGRPGATGQAGPPGPVG 1305

Query: 200  --------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
                    G  G  G  G PG  G+ G PG+ G  G  G+PG  G+ G+KG TG
Sbjct: 1306 PPGLPGLRGDTGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSTGQKGETG 1359



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 72/170 (42%), Gaps = 39/170 (22%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQ---------------------GIPGDEGKRGPKGDM 166
            G  G KGE GE G+PGV G PG +                     G  GD G+ G  G  
Sbjct: 1191 GPPGEKGEPGESGSPGVQGEPGVKGPVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQP 1250

Query: 167  GYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP------------ 211
            G PGP    G PG  GKRGP G  G  GR G  G  G  G PG  G              
Sbjct: 1251 GSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGQQGRPGATGQAGPPGPVGPPGLP 1310

Query: 212  ---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
               G  G  G  G  GL G  G PG  G  G++G+ GP+G+ G+ G  G+
Sbjct: 1311 GLRGDTGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSTGQKGETGI 1360



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 78/183 (42%), Gaps = 52/183 (28%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMG---YP-G 170
             G  GE GA+G  G  G +G++G  G  GPPGP   QG+PG  G++G  GD+G    P  
Sbjct: 1105 AGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMVSPLS 1164

Query: 171  PQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG--- 212
            PQG P               G  G  GP G+ G PG  G          PG+ G PG   
Sbjct: 1165 PQGNPSPLFLVLFQGPQGPPGGVGNLGPPGEKGEPGESG---------SPGVQGEPGVKG 1215

Query: 213  ------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                              ++G  G  G+DG PG+ G PG  G NG  G  G RG  G  G
Sbjct: 1216 PVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGTPG 1275

Query: 255  ING 257
              G
Sbjct: 1276 PEG 1278



 Score = 42.7 bits (99), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 89/264 (33%), Gaps = 109/264 (41%)

Query: 112  PGLQGPI---------------------------GQKGEIGAKGEMGVKGER-------- 136
            PG +GPI                           G KGE+G  G+ G KG +        
Sbjct: 1033 PGEKGPIGPTGRDGVQGPVGLPGPAGPPGGAGEDGDKGEVGDPGQKGAKGNKGEHGPPGP 1092

Query: 137  -------------GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
                         G  G PG  GP G  G  GDEG RG  G  G  G QG+PG  G++G 
Sbjct: 1093 PGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGE 1152

Query: 184  KGD----------------------------------MGYPGRIGLDGRDGLP---GEPG 206
             GD                                  +G PG  G  G  G P   GEPG
Sbjct: 1153 TGDVGPMVSPLSPQGNPSPLFLVLFQGPQGPPGGVGNLGPPGEKGEPGESGSPGVQGEPG 1212

Query: 207  L---------------------DGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKG 242
            +                     DG  G  G DG PG+ G P   G++G PG  G  G  G
Sbjct: 1213 VKGPVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAG 1272

Query: 243  MTGPRGNRGKSGINGVPGTPAICA 266
              GP G +G+ G  G  G P    
Sbjct: 1273 TPGPEGRQGEKGAKGQQGRPGATG 1296



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 70/138 (50%), Gaps = 16/138 (11%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGA---PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
           +G+KG++G  G  G  G +G KG+   PG  G  G +G  G  GK GP+G+ G  GP+  
Sbjct: 775 MGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPR-- 832

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI-------PGKDGLPG 227
               G+RGP+G  G  G  G  G DG  G PG  G+PG  G +G           D   G
Sbjct: 833 ----GQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPSSPDLXTG 888

Query: 228 KDGIPGTNGTNGEKGMTG 245
           KDG+PG  G  GE G  G
Sbjct: 889 KDGLPGHPGQRGEVGFQG 906


>gi|410952290|ref|XP_003982814.1| PREDICTED: collagen alpha-2(I) chain isoform 2 [Felis catus]
          Length = 1372

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 89/176 (50%), Gaps = 24/176 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGIPGDEGKRGPKGDM 166
           G +GP G+ G  G  G  G++G  G +G PG      V+GPPGP+G  G  G RGP GD 
Sbjct: 385 GKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGRAGVMGPPGPRGATGPAGVRGPNGDA 444

Query: 167 GYP------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGRN 214
           G P      GP+G PG  G  GP G  G  G  G+DGR       G  GEPG  G PG  
Sbjct: 445 GRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGEPGNIGFPGPK 504

Query: 215 GMDGIPGKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G PGK+      GL G  G PG +G NG +G  GP+G +G  G  G  G P  
Sbjct: 505 GPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGF 560



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 80/163 (49%), Gaps = 18/163 (11%)

Query: 113 GLQGPIGQKGEIGAKGEM---------------GVKGERGEKGAPGVVGPPGPQGIPGDE 157
           G  GP G KGE G KGE                G +G  GE G+ G  GPPG +G PG  
Sbjct: 352 GEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSR 411

Query: 158 GKRGPKGD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G  G    MG PGP+G  G  G RGP GD G PG  GL G  G PG PG  G  G+ 
Sbjct: 412 GLPGADGRAGVMGPPGPRGATGPAGVRGPNGDAGRPGEPGLMGPRGFPGAPGNVGPAGKE 471

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  G+PG DG PG  G  G  G  G  G  GP+G  G  G NG
Sbjct: 472 GPMGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNG 514



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 85/162 (52%), Gaps = 6/162 (3%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +GF  +     P G +GP+G  G  G  G +G  G RGE   PG +G PGP+G  G
Sbjct: 452 LMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGE---PGNIGFPGPKGPTG 508

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D GK G KG  G  G +G PG +G  G +G  G  G  G  G  G  G PG  G+PG  G
Sbjct: 509 DPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPAG 568

Query: 216 MDG---IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G    PG+ GLPG+ G+PG  G  GE+G  G  G  G SG
Sbjct: 569 TAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSG 610



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 90/177 (50%), Gaps = 30/177 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGP----- 162
           P G++GP    G+ G  GE G+ G RG  GAPG VGP G   P G+PG +G+ GP     
Sbjct: 434 PAGVRGP---NGDAGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAG 490

Query: 163 ----KGDMGYPGPQGIPGDEGKRGPKGDMGY------PGRIGLDGRDGLPGEPGLDGIPG 212
                G++G+PGP+G  GD GK G KG  G       PG  G +G  G PG  G+ G  G
Sbjct: 491 ARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKG 550

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRGNRGKSGINGVPG 260
             G  G PG  GLPG  G  G  G  GE+G+          GPRG RG  G +G  G
Sbjct: 551 EQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAG 607



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 81/159 (50%), Gaps = 15/159 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGVVGPPGPQGIPGDEG 158
           P G QGP+G+ GE GA G  G  GE+G  G              G++G PG  G+PG  G
Sbjct: 827 PRGDQGPVGRTGETGASGPPGFAGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRG 886

Query: 159 KRG-P--KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           +RG P   G +G PGP GI G  G RGP G +G PG  G  G  G  G PG DG PGR+G
Sbjct: 887 ERGLPGVSGSVGEPGPLGISGPPGARGPSGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDG 946

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G+ G PG  G  G  G  G  G  GP G  G  G
Sbjct: 947 QPGHKGERGYPGNIGPVGAVGAPGPHGPVGPTGKHGNRG 985



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 91/191 (47%), Gaps = 27/191 (14%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
             + G   S  E  P G+ GP G +G    +GA G  G  GE G  G PG  GPPG  G P
Sbjct: 889  GLPGVSGSVGEPGPLGISGPPGARGPSGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQP 948

Query: 155  GDEGKRG------PKGDMGYPGPQGIPGDEGKRGPKGDM---------------GYPGRI 193
            G +G+RG      P G +G PGP G  G  GK G +G+                G  G  
Sbjct: 949  GHKGERGYPGNIGPVGAVGAPGPHGPVGPTGKHGNRGEPGPAGVVGPVGAVGPRGPTGPQ 1008

Query: 194  GLDGRDGLPGEPGLDGIPG---RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G+ G  G PG+ G  G+PG    NG+ G+PG  G  G  G PG+ G  G +G  GP G  
Sbjct: 1009 GIRGDKGEPGDKGPRGLPGLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPM 1068

Query: 251  GKSGINGVPGT 261
            GK G  G PG+
Sbjct: 1069 GKDGRTGHPGS 1079



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 77/152 (50%), Gaps = 6/152 (3%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G+ GP G +G  G  G  G  G+ G  G PG++GP G  G PG+ G  G +G MG P   
Sbjct: 421 GVMGPPGPRGATGPAGVRGPNGDAGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLP--- 477

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKD 229
           GI G  G  GP G  G PG IG  G  G  G+PG +G  G  G+    G PG DG  G  
Sbjct: 478 GIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQ 537

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G PG  G  G KG  GP G  G  G+ G  GT
Sbjct: 538 GPPGPQGVQGGKGEQGPAGPPGFQGLPGPAGT 569



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 72/151 (47%), Gaps = 30/151 (19%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------------------GYP 169
           G MG+ G RG    PG  G PGPQG  G  G+ G  G                    G+P
Sbjct: 97  GPMGLMGPRGP---PGASGAPGPQGFQGPAGEPGEPGQTGPAGARGPPGPPGKAGEDGHP 153

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  G PG+ G  GP+G  G+PG  GL         PG  GI G NG+DG+ G+ G PG  
Sbjct: 154 GKPGRPGERGVVGPQGARGFPGTPGL---------PGFKGIRGHNGLDGLKGQPGAPGVK 204

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G NG  G TG RG  G+ G  G PG
Sbjct: 205 GEPGAPGENGTPGQTGARGLPGERGRVGAPG 235



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 81/153 (52%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G   ++    P G QGP G+ GE G  G  G +G  G  G  G  G PG  G PG
Sbjct: 101 LMGPRGPPGASGAPGPQGFQGPAGEPGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPG 160

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           + G  GP+G  G+PG  G+PG +G RG  G  G  G+ G  G  G PG PG +G PG+ G
Sbjct: 161 ERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTG 220

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G+PG+ G  G  G  G  G++G  G  GP G
Sbjct: 221 ARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG 253



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 80/160 (50%), Gaps = 18/160 (11%)

Query: 98  AMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            +QG         PPG QG   P G  GE+G  GE G+ GE G    PG  GP G +G P
Sbjct: 544 GVQGGKGEQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFG---LPGPAGPRGERGPP 600

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR- 213
           G+ G  GP G +G  GP G PG +G +G  G +G PG  G  G  GLPGE G  GIPG  
Sbjct: 601 GESGAAGPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGPSGPSGLPGERGAAGIPGGK 660

Query: 214 --------NGMDGIPGKD---GLPGKDGIPGTNGTNGEKG 242
                    G  G PG+D   G PG  G PG  G  G++G
Sbjct: 661 GEKGETGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRG 700



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 64/136 (47%), Gaps = 24/136 (17%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL------------ 195
           PGP G+    G RGP G  G PGPQG       +GP G+ G PG+ G             
Sbjct: 96  PGPMGL---MGPRGPPGASGAPGPQGF------QGPAGEPGEPGQTGPAGARGPPGPPGK 146

Query: 196 ---DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
              DG  G PG PG  G+ G  G  G PG  GLPG  GI G NG +G KG  G  G +G+
Sbjct: 147 AGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGE 206

Query: 253 SGINGVPGTPAICAYK 268
            G  G  GTP     +
Sbjct: 207 PGAPGENGTPGQTGAR 222



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 81/196 (41%), Gaps = 57/196 (29%)

Query: 112 PGLQGPIGQKGEIGAKG------------EMGVKGERGEKGAPGVVGPPG---PQGIPGD 156
           PG  GP G +GE+G  G              G+ G +G  G PGV G PG   P+GIPG 
Sbjct: 279 PGPAGPAGPRGEMGLPGVSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGP 338

Query: 157 E------------GKRGPKGDMGYPGPQG------------IPGDEGKRGPKGDMGYPGR 192
                        G+ GP G  G  G +G              G+EGKRGP G+ G  G 
Sbjct: 339 VGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGP 398

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G                  + G PG  GLPG DG  G  G  G +G TGP G RG 
Sbjct: 399 SGPPG------------------LRGSPGSRGLPGADGRAGVMGPPGPRGATGPAGVRGP 440

Query: 253 SGINGVPGTPAICAYK 268
           +G  G PG P +   +
Sbjct: 441 NGDAGRPGEPGLMGPR 456



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 60/128 (46%), Gaps = 24/128 (18%)

Query: 157 EGKRGPKGDM------GYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGL 195
           EG RGP+GD       G  G  G PG  G++GP G+               +G PG +GL
Sbjct: 822 EGLRGPRGDQGPVGRTGETGASGPPGFAGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGL 881

Query: 196 D---GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
               G  GLPG  G  G PG  G+ G PG  G  G  G PG NG  GE G  G  GN G 
Sbjct: 882 PGSRGERGLPGVSGSVGEPGPLGISGPPGARGPSGAVGAPGVNGAPGEAGRDGNPGNDGP 941

Query: 253 SGINGVPG 260
            G +G PG
Sbjct: 942 PGRDGQPG 949



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 60/142 (42%), Gaps = 36/142 (25%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMG-- 167
           G  G  G KGE GA GE G  G+ G +G PG    VG PGP G  G +G  GP G  G  
Sbjct: 196 GQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPI 255

Query: 168 ----------------YPGPQGIPGDEGKRGPKGDMGYPG---------------RIGLD 196
                             GP G PG  G  GP+G+MG PG                 G  
Sbjct: 256 GSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEMGLPGVSGPVGPPGNPGANGLTGAK 315

Query: 197 GRDGLPGEPGLDGIPGRNGMDG 218
           G  GLPG  G  G+PG  G+ G
Sbjct: 316 GAAGLPGVAGAPGLPGPRGIPG 337



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 65/142 (45%), Gaps = 27/142 (19%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---------------MGYPGPQGIP 175
           G++G RG++G  G  G  G  G PG  G++GP G+               +G PG  G+P
Sbjct: 823 GLRGPRGDQGPVGRTGETGASGPPGFAGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLP 882

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG            L G  G  GEPG  GI G  G  G  G  G PG +G PG  
Sbjct: 883 GSRGERG------------LPGVSGSVGEPGPLGISGPPGARGPSGAVGAPGVNGAPGEA 930

Query: 236 GTNGEKGMTGPRGNRGKSGING 257
           G +G  G  GP G  G+ G  G
Sbjct: 931 GRDGNPGNDGPPGRDGQPGHKG 952



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 58/117 (49%), Gaps = 18/117 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP-- 169
            PG  GP+G  G+ G +GE G  G  G  GA G  GP GPQGI GD+G+ G KG  G P  
Sbjct: 969  PGPHGPVGPTGKHGNRGEPGPAGVVGPVGAVGPRGPTGPQGIRGDKGEPGDKGPRGLPGL 1028

Query: 170  ----------------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
                            G QG PG  G  GP+G  G  G +G DGR G PG  G  G+
Sbjct: 1029 KGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPMGKDGRTGHPGSVGPAGV 1085


>gi|328723513|ref|XP_001947747.2| PREDICTED: collagen alpha-1(IV) chain-like [Acyrthosiphon pisum]
          Length = 1778

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/190 (41%), Positives = 99/190 (52%), Gaps = 23/190 (12%)

Query: 98   AMQGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGV------KGERGEKGAPGVVGPP 148
             +QGF     +  P G +GP    G +G  GA G+ G+      KG++G+ G PG+ GPP
Sbjct: 947  GLQGFPGPKGDTGPTGPEGPKGFSGFRGMPGAFGKPGIDGMPGEKGDKGDTGLPGISGPP 1006

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---------GYPGRIGLDGRD 199
            G  G+PG +G RG KGD+G+PGP G  G  G +GP GD          G PG +   G+ 
Sbjct: 1007 GEDGLPGPQGYRGEKGDIGFPGPPGETGLRGLQGPMGDRGPLGLQGLKGEPGPVSEKGQK 1066

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI-----PGTNGTNGEKGMTGPRGNRGKSG 254
            G PGE GL G  G  GMDG+PG  G  G  GI      G  G  G  G  G  GN G+ G
Sbjct: 1067 GEPGESGLRGPQGEPGMDGLPGMKGDIGFPGIGLQGWSGQKGEPGTPGYDGRPGNDGEKG 1126

Query: 255  INGVPGTPAI 264
            + GV G P +
Sbjct: 1127 VAGVAGVPGM 1136



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 105/193 (54%), Gaps = 31/193 (16%)

Query: 119  GQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            G KG++G  GE G    KG++GE+G PG+ G  G QG+PGD G  G  G +G PG  GI 
Sbjct: 1393 GDKGDVGFSGEPGYPGSKGDKGERGYPGLEGMQGVQGLPGDRGMTGIPGKLGMPGISGIK 1452

Query: 176  GDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GD+G+       G KG+ G PG +G  G     G+PG DG+PG +G+ G  G  GL G  
Sbjct: 1453 GDKGEPGLAPPPGSKGERGLPGPVGWPGEK---GDPGNDGLPGLDGLKGNMGVPGLNGPV 1509

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGI---NGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
            G PG+ G  GE G+ GP+G +G+ G+   +G+PG P         C   P+  T  LL+ 
Sbjct: 1510 GPPGSEGEKGEPGVEGPQGLQGQPGLRGNDGIPGKP---------CESEPHYSTGILLV- 1559

Query: 287  PTIVGSEHIFSSS 299
                  +H  SSS
Sbjct: 1560 ------KHSQSSS 1566



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 102/219 (46%), Gaps = 45/219 (20%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------- 143
            IP+V  +G      E    GLQGP G+ G  G  G  G+ GE+G +G PG          
Sbjct: 850  IPIVGPKGSEGFPGEKGERGLQGPFGRPGLSGEPGTPGLPGEKGNQGEPGLEGLTGQPGT 909

Query: 144  --------------------VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
                                + GP G  G+PG+ G++G     G+PGP+G  G  G  GP
Sbjct: 910  KGEPGPVGPSGPPGNDGLPGIDGPKGETGLPGEPGRQG---LQGFPGPKGDTGPTGPEGP 966

Query: 184  KGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---------GI 231
            KG  G+   PG  G  G DG+PGE G  G  G  G+ G PG+DGLPG           G 
Sbjct: 967  KGFSGFRGMPGAFGKPGIDGMPGEKGDKGDTGLPGISGPPGEDGLPGPQGYRGEKGDIGF 1026

Query: 232  PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G  G +G+ GP G+RG  G+ G+ G P   + K +
Sbjct: 1027 PGPPGETGLRGLQGPMGDRGPLGLQGLKGEPGPVSEKGQ 1065



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/201 (40%), Positives = 100/201 (49%), Gaps = 50/201 (24%)

Query: 112 PGLQGPIGQKGEIGAK------GEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGP 162
           PG+ G  G KGEIG +      GE G KGE G  G PG+ GP GP    G PG+ G  G 
Sbjct: 551 PGIPGRDGPKGEIGGRCQGCSPGEKGTKGEPGLYGIPGLKGPRGPPGEIGYPGEPGADGL 610

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGY---------------------PGRIGLDGRDGL 201
            G  G PG  G+ G +G+ GP G+ G                      PGR GL G DGL
Sbjct: 611 IGQTGEPGAAGVDGAQGEVGPPGEKGAAAIITANLLETLKGEPGPRGDPGRDGLRGADGL 670

Query: 202 ---PGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPGTNGTNGEKGMT----------- 244
               G+PGLDG+PG NG     G PG DG PG+   PG  G+ GEKG++           
Sbjct: 671 NGPEGKPGLDGLPGINGEKGDRGFPGSDGTPGQ---PGYLGSKGEKGISIKGEQGTLGRP 727

Query: 245 GPRGNRGKSGINGVPGTPAIC 265
           G RG++G+ G+ G  GTP  C
Sbjct: 728 GLRGDKGEPGLTGQKGTPGNC 748



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 101/219 (46%), Gaps = 59/219 (26%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKG-AP-GVVGPPGPQGI------------PGD 156
           P G  G  G+ GE G KGE G +GERG  G +P G+ GPPG +G             PG 
Sbjct: 494 PKGFDGVDGRDGEKGLKGERGYQGERGSPGDSPTGIAGPPGVKGATGEKGEDGKPGNPGI 553

Query: 157 EGKRGPKGDMG---------------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            G+ GPKG++G                PG  GIPG +G RGP G++GYPG  G DG  G 
Sbjct: 554 PGRDGPKGEIGGRCQGCSPGEKGTKGEPGLYGIPGLKGPRGPPGEIGYPGEPGADGLIGQ 613

Query: 202 PGEPGLDGI---------PGRNGMDGI------------------PGKDGLPGKDGIPGT 234
            GEPG  G+         PG  G   I                  PG+DGL G DG+ G 
Sbjct: 614 TGEPGAAGVDGAQGEVGPPGEKGAAAIITANLLETLKGEPGPRGDPGRDGLRGADGLNGP 673

Query: 235 NGT---NGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G    +G  G+ G +G+RG  G +G PG P     K E
Sbjct: 674 EGKPGLDGLPGINGEKGDRGFPGSDGTPGQPGYLGSKGE 712



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/147 (45%), Positives = 82/147 (55%), Gaps = 20/147 (13%)

Query: 135 ERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           E+G +G PG  G PGPQGI G    EG  GP GD G  GP G+ G +G RG  G  G+PG
Sbjct: 76  EKGSRGPPGSTGLPGPQGIQGYQGLEGLPGPVGDKGDTGPIGVRGPKGDRGKTGIPGFPG 135

Query: 192 RIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP-- 246
             G+ G+    G+PG PGLDG    NG DG PG  GLPG  G  G  G  GEKG+ G   
Sbjct: 136 VSGVPGQMGPQGIPGIPGLDGC---NGTDGNPGLPGLPGAIGPRGYQGITGEKGLKGEPA 192

Query: 247 ------RGNRGKSGIN---GVPGTPAI 264
                 +G +G+ G++   G+PG P I
Sbjct: 193 LISIHNKGQKGEPGLDGDRGLPGNPGI 219



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 97/200 (48%), Gaps = 41/200 (20%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            +G   S  E   PG  G  G  GE G+ G +G+ G  G +G PG+VGP G  GI G++G
Sbjct: 757 QKGEPGSQGEKGEPGTPGIDGYPGEKGSIGPIGLTGPVGPRGIPGLVGPRGQPGIRGEKG 816

Query: 159 KRGP---------KGDMGYPG---PQGIPGDEGKR--GPKGDMGYPGRIGLD------GR 198
             GP          G+ GYPG   P+G+ G+ G    GPKG  G+PG  G        GR
Sbjct: 817 NTGPMGFLGEAGRDGERGYPGLPSPKGVKGEPGIPIVGPKGSEGFPGEKGERGLQGPFGR 876

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK------------------DGIPGTNGTNGE 240
            GL GEPG  G+PG  G  G PG +GL G+                  DG+PG +G  GE
Sbjct: 877 PGLSGEPGTPGLPGEKGNQGEPGLEGLTGQPGTKGEPGPVGPSGPPGNDGLPGIDGPKGE 936

Query: 241 KGMTGPRGNRGKSGINGVPG 260
            G+    G  G+ G+ G PG
Sbjct: 937 TGLP---GEPGRQGLQGFPG 953



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 98/200 (49%), Gaps = 39/200 (19%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           I L  +QG   +  E    GL G  G +G  GA+G  G +G  GEKGA  +VGP G  G+
Sbjct: 442 IGLEGLQGEKGTKGEPGLTGLPGESGPRGFAGAQGPPGPRGFVGEKGAS-IVGPKGFDGV 500

Query: 154 PGDEGKRGPKGDMGYPGPQGIPGD-----------EGKRGPKGDMGYPGRIGLDGRD--- 199
            G +G++G KG+ GY G +G PGD           +G  G KG+ G PG  G+ GRD   
Sbjct: 501 DGRDGEKGLKGERGYQGERGSPGDSPTGIAGPPGVKGATGEKGEDGKPGNPGIPGRDGPK 560

Query: 200 ---------------GLPGEPGLDGIPGRNGMDGIPGK---------DGLPGKDGIPGTN 235
                          G  GEPGL GIPG  G  G PG+         DGL G+ G PG  
Sbjct: 561 GEIGGRCQGCSPGEKGTKGEPGLYGIPGLKGPRGPPGEIGYPGEPGADGLIGQTGEPGAA 620

Query: 236 GTNGEKGMTGPRGNRGKSGI 255
           G +G +G  GP G +G + I
Sbjct: 621 GVDGAQGEVGPPGEKGAAAI 640



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 92/173 (53%), Gaps = 26/173 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG---------EKGAPGV--VGPPGPQGIPGDEGKR 160
           PG++G  G  G +G  GE G  GERG          KG PG+  VGP G +G PG++G+R
Sbjct: 809 PGIRGEKGNTGPMGFLGEAGRDGERGYPGLPSPKGVKGEPGIPIVGPKGSEGFPGEKGER 868

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------------GLD 208
           G +G  G PG  G PG  G  G KG+ G PG  GL G+ G  GEP            GL 
Sbjct: 869 GLQGPFGRPGLSGEPGTPGLPGEKGNQGEPGLEGLTGQPGTKGEPGPVGPSGPPGNDGLP 928

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           GI G  G  G+PG+   PG+ G+ G  G  G+ G TGP G +G SG  G+PG 
Sbjct: 929 GIDGPKGETGLPGE---PGRQGLQGFPGPKGDTGPTGPEGPKGFSGFRGMPGA 978



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 83/151 (54%), Gaps = 14/151 (9%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP---GPQGIPGDEGKRGP 183
           KGE G +GE+GE G PG+ G PG +G  G  G  GP G  G P   GP+G PG  G++G 
Sbjct: 758 KGEPGSQGEKGEPGTPGIDGYPGEKGSIGPIGLTGPVGPRGIPGLVGPRGQPGIRGEKGN 817

Query: 184 KGDMGYPGRIGLDGRDGLPGEP------GLDGIP--GRNGMDGIPGKD---GLPGKDGIP 232
            G MG+ G  G DG  G PG P      G  GIP  G  G +G PG+    GL G  G P
Sbjct: 818 TGPMGFLGEAGRDGERGYPGLPSPKGVKGEPGIPIVGPKGSEGFPGEKGERGLQGPFGRP 877

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G +G  G  G+ G +GN+G+ G+ G+ G P 
Sbjct: 878 GLSGEPGTPGLPGEKGNQGEPGLEGLTGQPG 908



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 96/198 (48%), Gaps = 25/198 (12%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG- 155
              + G      E   PG QG  G+KG+IG  G  G  G RG +G  G  GP G QG+ G 
Sbjct: 997  TGLPGISGPPGEDGLPGPQGYRGEKGDIGFPGPPGETGLRGLQGPMGDRGPLGLQGLKGE 1056

Query: 156  -----DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---GRDGLPGEPGL 207
                 ++G++G  G+ G  GPQG PG +G  G KGD+G+PG IGL    G+ G PG PG 
Sbjct: 1057 PGPVSEKGQKGEPGESGLRGPQGEPGMDGLPGMKGDIGFPG-IGLQGWSGQKGEPGTPGY 1115

Query: 208  DGIPGRNGMDGIPGKDGLPGKDG---------------IPGTNGTNGEKGMTGPRGNRGK 252
            DG PG +G  G+ G  G+PG  G               +   +G  G  G  G  G  G+
Sbjct: 1116 DGRPGNDGEKGVAGVAGVPGMKGDTGPRGVPGTPGPPGMDALDGMKGSAGYPGIPGQEGE 1175

Query: 253  SGINGVPGTPAICAYKRE 270
             G  G PG P +   K E
Sbjct: 1176 KGDIGYPGIPGLDGEKGE 1193



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 106/222 (47%), Gaps = 52/222 (23%)

Query: 94  IPLVAMQGFCNSTKEYCP--PGLQGPIGQKGEIGAKGEMGVKGE--------RGEKGAPG 143
           IP +     CN T +  P  PGL G IG +G  G  GE G+KGE        +G+KG PG
Sbjct: 148 IPGIPGLDGCNGT-DGNPGLPGLPGAIGPRGYQGITGEKGLKGEPALISIHNKGQKGEPG 206

Query: 144 VVGPPGPQGIPGDEGKRGPKG---DMGYPGPQGIP--------------------GDEGK 180
           + G  G  G PG +G +GP G   +MG  G +G+P                    G++G+
Sbjct: 207 LDGDRGLPGNPGIQGIQGPVGQIGEMGIKGNRGVPGLKGEKGNMGLGYEGSRGEKGNKGE 266

Query: 181 RGP---------------KGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGK 222
           RGP                G  G PG  G  G+DG P   GEPG+ G PG  G  G  G+
Sbjct: 267 RGPPGPPYLRLDNNNTTVAGPAGEPGEKGYPGQDGEPGIKGEPGMIGDPGNPGDVGEKGE 326

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            GL G  G  G +G +G  G  G +G+RG  G+NG+PG P +
Sbjct: 327 KGLVGTAGPRGRDGNHGPAGPAGQKGDRGNDGLNGLPGRPGL 368



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 80/160 (50%), Gaps = 38/160 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGV--------------KGERGEKGAPGVVGPPGP-------- 150
           G+QGP+GQ GE+G KG  GV              +G RGEKG  G  GPPGP        
Sbjct: 221 GIQGPVGQIGEMGIKGNRGVPGLKGEKGNMGLGYEGSRGEKGNKGERGPPGPPYLRLDNN 280

Query: 151 -------------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
                        +G PG +G+ G KG+ G  G  G PGD G++G KG +G  G  G DG
Sbjct: 281 NTTVAGPAGEPGEKGYPGQDGEPGIKGEPGMIGDPGNPGDVGEKGEKGLVGTAGPRGRDG 340

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGT 234
             G  G  G  G  G +G++G+PG+ GL   PG DG PG 
Sbjct: 341 NHGPAGPAGQKGDRGNDGLNGLPGRPGLKGEPGLDGAPGA 380



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 100/252 (39%), Gaps = 96/252 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------- 161
            PG+ G  G+KG+IG  G  G+ GE+GE+G PG++GP G +G  GD+G RG          
Sbjct: 1167 PGIPGQEGEKGDIGYPGIPGLDGEKGERGLPGLIGPSGLKGPMGDKGDRGLPGPAVDIKG 1226

Query: 162  ------------------------------PKGDMGYPGPQGIPGDEGKRGPKGDMG--- 188
                                           KGDMG PG  G PG  G RG KG++G   
Sbjct: 1227 DKGEPGPPGFPGLPGPAGLVGLDGPPGVEGEKGDMGIPGATGYPGPSGPRGEKGNVGPQG 1286

Query: 189  --------------YPGRIGLDGRDGLPGEPGLD------------------GIPGRNG- 215
                           PG +G  GRDGLPG  G                    G PG  G 
Sbjct: 1287 LSGIPGTTVKGEKGLPGLLGKHGRDGLPGLSGEKGDKGLPGLPGLPGSVGPVGFPGSPGD 1346

Query: 216  --------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGV 258
                           DG P   G+PGKDG PG  G  GE G   P   +G++G  G +G 
Sbjct: 1347 VGAIGPPGFPGPPGSDGFP---GIPGKDGPPGLMGFKGEPGNPAPYGEKGDKGDVGFSGE 1403

Query: 259  PGTPAICAYKRE 270
            PG P     K E
Sbjct: 1404 PGYPGSKGDKGE 1415



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 85/175 (48%), Gaps = 29/175 (16%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMG------YPG 170
           +KG  G  G  G+ G +G +G  G+ G PGP G  GD G    RGPKGD G      +PG
Sbjct: 76  EKGSRGPPGSTGLPGPQGIQGYQGLEGLPGPVGDKGDTGPIGVRGPKGDRGKTGIPGFPG 135

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL----- 225
             G+PG   + GP+G  G PG  G +G DG PG PGL G  G  G  GI G+ GL     
Sbjct: 136 VSGVPG---QMGPQGIPGIPGLDGCNGTDGNPGLPGLPGAIGPRGYQGITGEKGLKGEPA 192

Query: 226 ------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                       PG DG  G  G  G +G+ GP G  G+ GI G  G P +   K
Sbjct: 193 LISIHNKGQKGEPGLDGDRGLPGNPGIQGIQGPVGQIGEMGIKGNRGVPGLKGEK 247



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 66/121 (54%), Gaps = 12/121 (9%)

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM------GYPGRIGLDGRDGLPGEP 205
            G PG  GK GP G MG+ G  G P   G++G KGD+      GYPG  G  G  G PG  
Sbjct: 1363 GFPGIPGKDGPPGLMGFKGEPGNPAPYGEKGDKGDVGFSGEPGYPGSKGDKGERGYPGLE 1422

Query: 206  GLDGI---PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            G+ G+   PG  GM GIPGK G+PG  GI    G  GE G+  P G++G+ G+ G  G P
Sbjct: 1423 GMQGVQGLPGDRGMTGIPGKLGMPGISGI---KGDKGEPGLAPPPGSKGERGLPGPVGWP 1479

Query: 263  A 263
             
Sbjct: 1480 G 1480



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 93/208 (44%), Gaps = 49/208 (23%)

Query: 94   IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP----------- 142
             P + +QG+     E   PG  G  G  GE G  G  GV G +G+ G             
Sbjct: 1095 FPGIGLQGWSGQKGEPGTPGYDGRPGNDGEKGVAGVAGVPGMKGDTGPRGVPGTPGPPGM 1154

Query: 143  ----GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                G+ G  G  GIPG EG+   KGD+GYP   GIPG +G+   KG+ G PG IG  G 
Sbjct: 1155 DALDGMKGSAGYPGIPGQEGE---KGDIGYP---GIPGLDGE---KGERGLPGLIGPSGL 1205

Query: 199  DGLPGEPGLDGIPGRN-------------------------GMDGIPGKDGLPGKDGIPG 233
             G  G+ G  G+PG                           G+DG PG +G  G  GIPG
Sbjct: 1206 KGPMGDKGDRGLPGPAVDIKGDKGEPGPPGFPGLPGPAGLVGLDGPPGVEGEKGDMGIPG 1265

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  G  G  G +GN G  G++G+PGT
Sbjct: 1266 ATGYPGPSGPRGEKGNVGPQGLSGIPGT 1293



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 104/244 (42%), Gaps = 59/244 (24%)

Query: 111 PPGLQGPIGQKG------------------EIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
           P G  GP G KG                    G  G +G++G +GEK   G  G PG  G
Sbjct: 405 PRGYPGPTGPKGLDGIDGEPGPPGPKGNIGGQGVPGYIGLEGLQGEK---GTKGEPGLTG 461

Query: 153 IPGDEGKRGPKGDMGYPGPQ-----------------GIPGDEGKRGPKGDMGYPGRIGL 195
           +PG+ G RG  G  G PGP+                 G+ G +G++G KG+ GY G  G 
Sbjct: 462 LPGESGPRGFAGAQGPPGPRGFVGEKGASIVGPKGFDGVDGRDGEKGLKGERGYQGERGS 521

Query: 196 DGRD--GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------------IPGTNGTNGE- 240
            G    G+ G PG+ G  G  G DG PG  G+PG+DG             PG  GT GE 
Sbjct: 522 PGDSPTGIAGPPGVKGATGEKGEDGKPGNPGIPGRDGPKGEIGGRCQGCSPGEKGTKGEP 581

Query: 241 -----KGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHI 295
                 G+ GPRG  G+ G  G PG   +     E  +   +    + + PP   G+  I
Sbjct: 582 GLYGIPGLKGPRGPPGEIGYPGEPGADGLIGQTGEPGAAGVDGAQGE-VGPPGEKGAAAI 640

Query: 296 FSSS 299
            +++
Sbjct: 641 ITAN 644



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 95/192 (49%), Gaps = 41/192 (21%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            GF     E    GLQGP+G +G +G    KGE G   E+G+KG PG  G  GPQG PG +
Sbjct: 1025 GFPGPPGETGLRGLQGPMGDRGPLGLQGLKGEPGPVSEKGQKGEPGESGLRGPQGEPGMD 1084

Query: 158  GKRGPKGDMGYPG---------------------P-----------QGIPGDEGKRGPKG 185
            G  G KGD+G+PG                     P            G+PG +G  GP+G
Sbjct: 1085 GLPGMKGDIGFPGIGLQGWSGQKGEPGTPGYDGRPGNDGEKGVAGVAGVPGMKGDTGPRG 1144

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------GIPGKDGLPGKDGIPGTNGTNG 239
              G PG  G+D  DG+ G  G  GIPG+ G        GIPG DG  G+ G+PG  G +G
Sbjct: 1145 VPGTPGPPGMDALDGMKGSAGYPGIPGQEGEKGDIGYPGIPGLDGEKGERGLPGLIGPSG 1204

Query: 240  EKGMTGPRGNRG 251
             KG  G +G+RG
Sbjct: 1205 LKGPMGDKGDRG 1216



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 67/148 (45%), Gaps = 23/148 (15%)

Query: 66  YEEIR-EREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEI 124
           YE  R E+  + +      P++ L+  +      + G      E   PG  G  G KGE 
Sbjct: 254 YEGSRGEKGNKGERGPPGPPYLRLDNNN----TTVAGPAGEPGEKGYPGQDGEPGIKGEP 309

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G+ G  G+ GEKG  G+VG  GP+G  G+ G  GP G                   K
Sbjct: 310 GMIGDPGNPGDVGEKGEKGLVGTAGPRGRDGNHGPAGPAGQ------------------K 351

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           GD G  G  GL GR GL GEPGLDG PG
Sbjct: 352 GDRGNDGLNGLPGRPGLKGEPGLDGAPG 379



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 89/195 (45%), Gaps = 39/195 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPG 170
           GL GP   +G+ G  G  G+ GE+G++G PG  G PG  G  G +G++G   KG+ G  G
Sbjct: 669 GLNGP---EGKPGLDGLPGINGEKGDRGFPGSDGTPGQPGYLGSKGEKGISIKGEQGTLG 725

Query: 171 PQGIPGDEGKRGPKGDMGYPGRI-------------GLDGRDGLPGEPGLDGIPGRNG-- 215
             G+ GD+G+ G  G  G PG               G  G  G PG PG+DG PG  G  
Sbjct: 726 RPGLRGDKGEPGLTGQKGTPGNCELMNIGKIQKGEPGSQGEKGEPGTPGIDGYPGEKGSI 785

Query: 216 ----MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG---------------IN 256
               + G  G  G+PG  G  G  G  GEKG TGP G  G++G               + 
Sbjct: 786 GPIGLTGPVGPRGIPGLVGPRGQPGIRGEKGNTGPMGFLGEAGRDGERGYPGLPSPKGVK 845

Query: 257 GVPGTPAICAYKRES 271
           G PG P +     E 
Sbjct: 846 GEPGIPIVGPKGSEG 860



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 83/174 (47%), Gaps = 36/174 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV--KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           PG  G  GQ G +G+KGE G+  KGE+G  G PG+               RG KG+ G  
Sbjct: 695 PGSDGTPGQPGYLGSKGEKGISIKGEQGTLGRPGL---------------RGDKGEPGLT 739

Query: 170 GPQGIPGD----------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           G +G PG+          +G+ G +G+ G PG  G+DG  G  G  G  G+ G  G  GI
Sbjct: 740 GQKGTPGNCELMNIGKIQKGEPGSQGEKGEPGTPGIDGYPGEKGSIGPIGLTGPVGPRGI 799

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPAICAYKRE 270
           PG  G  G+ GI       GEKG TGP    G  G+ G  G PG P+    K E
Sbjct: 800 PGLVGPRGQPGI------RGEKGNTGPMGFLGEAGRDGERGYPGLPSPKGVKGE 847



 Score = 46.2 bits (108), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 94/236 (39%), Gaps = 61/236 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  G  G++G KGE G+ G  G +G  G  GP GP G  GD G  G  G  G PG 
Sbjct: 309 PGMIGDPGNPGDVGEKGEKGLVGTAGPRGRDGNHGPAGPAGQKGDRGNDGLNGLPGRPGL 368

Query: 172 QGIPGDEGK-------------------------RGPKG--------------------- 185
           +G PG +G                          +GP+G                     
Sbjct: 369 KGEPGLDGAPGAAGLRGPPGQPGGGKGRPGLPGPQGPRGYPGPTGPKGLDGIDGEPGPPG 428

Query: 186 ------DMGYPGRIGLDG---RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   G PG IGL+G     G  GEPGL G+PG +G  G  G  G PG  G  G  G
Sbjct: 429 PKGNIGGQGVPGYIGLEGLQGEKGTKGEPGLTGLPGESGPRGFAGAQGPPGPRGFVGEKG 488

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGS 292
            +    + GP+G  G  G +G  G      Y+ E  S  P    + +  PP + G+
Sbjct: 489 AS----IVGPKGFDGVDGRDGEKGLKGERGYQGERGS--PGDSPTGIAGPPGVKGA 538



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 55/126 (43%), Positives = 71/126 (56%), Gaps = 21/126 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG-AP-----GVVGPPGPQGIPGDEGKRGPKGD 165
            PG +G  G  G++G  G  G+KG++GE G AP     G  G PGP G PG+      KGD
Sbjct: 1431 PGDRGMTGIPGKLGMPGISGIKGDKGEPGLAPPPGSKGERGLPGPVGWPGE------KGD 1484

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
               PG  G+PG +G    KG+MG P   G +G  G +G  GEPG++G  G  G  G+ G 
Sbjct: 1485 ---PGNDGLPGLDGL---KGNMGVPGLNGPVGPPGSEGEKGEPGVEGPQGLQGQPGLRGN 1538

Query: 223  DGLPGK 228
            DG+PGK
Sbjct: 1539 DGIPGK 1544



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 60/115 (52%), Gaps = 18/115 (15%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            + M G      +   PGL  P G KGE G  G +G  GE+G+         PG  G+PG 
Sbjct: 1443 LGMPGISGIKGDKGEPGLAPPPGSKGERGLPGPVGWPGEKGD---------PGNDGLPGL 1493

Query: 157  EGKRGPKGDMGYP---GPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEP 205
            +G    KG+MG P   GP G PG EG++G    +G  G  G+ GL G DG+PG+P
Sbjct: 1494 DGL---KGNMGVPGLNGPVGPPGSEGEKGEPGVEGPQGLQGQPGLRGNDGIPGKP 1545


>gi|115347|sp|P27393.1|CO4A2_ASCSU RecName: Full=Collagen alpha-2(IV) chain; Flags: Precursor
 gi|159649|gb|AAA18014.1| putative [Ascaris suum]
          Length = 1763

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/184 (42%), Positives = 94/184 (51%), Gaps = 26/184 (14%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-P 171
            GL G  G  G+ G  G  G KGE G  G PG+VGPPG  G  G  G RG KGD G PG P
Sbjct: 1115 GLPGAPGLPGQDGLPGLPGQKGESGFPGQPGLVGPPGLPGKMGAPGIRGEKGDAGLPGLP 1174

Query: 172  -----QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL- 225
                  G+PG +G+ G  G  G PG +G  G  G PG PGL G PG  G++G PG  G+ 
Sbjct: 1175 GERGLDGLPGQKGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMK 1234

Query: 226  --------PGKDGIPGTNGTNGEKGM-----------TGPRGNRGKSGINGVPGTPAICA 266
                    PG+DG+PG  G  GE G+           TGP+GN G  G+ G  G P +  
Sbjct: 1235 GEAGLPGAPGRDGLPGLPGMKGEAGLPGLPGQPGKSITGPKGNAGLPGLPGKDGLPGLPG 1294

Query: 267  YKRE 270
             K E
Sbjct: 1295 LKGE 1298



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/190 (41%), Positives = 92/190 (48%), Gaps = 23/190 (12%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            GF        PPGL G +G  G  G KG+ G+ G  GE+G  G+ G  G  G PG  G  
Sbjct: 1139 GFPGQPGLVGPPGLPGKMGAPGIRGEKGDAGLPGLPGERGLDGLPGQKGEAGFPGAPGLP 1198

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD--- 217
            GP G  G  G  G PG +G+ G  G  G PG  G+ G  GLPG PG DG+PG  GM    
Sbjct: 1199 GPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEAGLPGAPGRDGLPGLPGMKGEA 1258

Query: 218  ---GIPGK--------------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G+PG+               GLPGKDG+PG  G  GE G     G  G +GI G PG
Sbjct: 1259 GLPGLPGQPGKSITGPKGNAGLPGLPGKDGLPGLPGLKGEPGKP---GYAGAAGIKGEPG 1315

Query: 261  TPAICAYKRE 270
             P I   K E
Sbjct: 1316 LPGIPGAKGE 1325



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 93/178 (52%), Gaps = 27/178 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G KG  GA G  G+KGE G  GAPG+ G  G  G+PG +G+ G  G  G  GP
Sbjct: 1090 PGRPGAPGPKGLDGAPGFPGLKGEAGLPGAPGLPGQDGLPGLPGQKGESGFPGQPGLVGP 1149

Query: 172  QGIPGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP-- 226
             G+PG  G    RG KGD G P         GLPGE GLDG+PG+ G  G PG  GLP  
Sbjct: 1150 PGLPGKMGAPGIRGEKGDAGLP---------GLPGERGLDGLPGQKGEAGFPGAPGLPGP 1200

Query: 227  ----GKDGIPGTNGTNGEKGM------TGPRGNRGKSGINGVPGT---PAICAYKRES 271
                G  G PG  G  GE G+       GPRG +G++G+ G PG    P +   K E+
Sbjct: 1201 VGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEAGLPGAPGRDGLPGLPGMKGEA 1258



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 88/165 (53%), Gaps = 18/165 (10%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG-- 182
            GA G MG KG  G  G PG  G PGP+G+ G  G  G KG+ G PG  G+PG +G  G  
Sbjct: 1073 GAPGLMGEKGLPGLPGKPGRPGAPGPKGLDGAPGFPGLKGEAGLPGAPGLPGQDGLPGLP 1132

Query: 183  -PKGDMGYPGRIGLDGRDGLPG------------EPGLDGIPGRNGMDGIPGKD---GLP 226
              KG+ G+PG+ GL G  GLPG            + GL G+PG  G+DG+PG+    G P
Sbjct: 1133 GQKGESGFPGQPGLVGPPGLPGKMGAPGIRGEKGDAGLPGLPGERGLDGLPGQKGEAGFP 1192

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  G+PG  G  G  G  G  G +G+ G+ G+ G P     K E+
Sbjct: 1193 GAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEA 1237



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/141 (48%), Positives = 78/141 (55%), Gaps = 6/141 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G  G+ G+ G  G  G+KGE G  G PG  G PG  GIPG   KRG  G  G PGP
Sbjct: 1290 PGLPGLKGEPGKPGYAGAAGIKGEPGLPGIPGAKGEPGLSGIPG---KRGNDGIPGKPGP 1346

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G+PG  G +G  G  G  G  GL G  GL GEPGL G PG+ G  G PG+ G+P   G+
Sbjct: 1347 AGLPGLPGMKGESGLPGPQGPAGLPGLPGLKGEPGLPGFPGQKGETGFPGQPGIP---GL 1403

Query: 232  PGTNGTNGEKGMTGPRGNRGK 252
            PG  G +G  G  G  G  GK
Sbjct: 1404 PGMKGDSGYPGAPGRDGAPGK 1424



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 96/216 (44%), Gaps = 56/216 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGE------------RGEKGAPGVVGPPGPQGIPGDEGK 159
            PGL GP+G KG  GA G  G+KGE            RG KG  G+ G PG  G+PG  G 
Sbjct: 1195 PGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEAGLPGAPGRDGLPGLPGM 1254

Query: 160  RG-----------------PKGDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGR- 198
            +G                 PKG+ G PG     G+PG  G +G  G  GY G  G+ G  
Sbjct: 1255 KGEAGLPGLPGQPGKSITGPKGNAGLPGLPGKDGLPGLPGLKGEPGKPGYAGAAGIKGEP 1314

Query: 199  -----------------------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                                   DG+PG+PG  G+PG  GM G  G  G  G  G+PG  
Sbjct: 1315 GLPGIPGAKGEPGLSGIPGKRGNDGIPGKPGPAGLPGLPGMKGESGLPGPQGPAGLPGLP 1374

Query: 236  GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            G  GE G+ G  G +G++G  G PG P +   K +S
Sbjct: 1375 GLKGEPGLPGFPGQKGETGFPGQPGIPGLPGMKGDS 1410



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 90/181 (49%), Gaps = 32/181 (17%)

Query: 119  GQKGEIGAKGEMGV---------------KGERGEK--GAPGVVGPPGPQGIPGDEGKRG 161
            G+KGE G  G+ G+               KG+ G+   GAPG++G  G  G+PG  G+  
Sbjct: 1035 GEKGEPGLPGQPGLRGPQGPPGLPGLPGLKGDEGQPGYGAPGLMGEKGLPGLPGKPGRP- 1093

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
                 G PGP+G+ G  G  G KG+ G PG  GL G+DGLPG PG  G  G  G  G+ G
Sbjct: 1094 -----GAPGPKGLDGAPGFPGLKGEAGLPGAPGLPGQDGLPGLPGQKGESGFPGQPGLVG 1148

Query: 222  KDGLPGKDGIPGTNGTN---------GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC 272
              GLPGK G PG  G           GE+G+ G  G +G++G  G PG P     K  + 
Sbjct: 1149 PPGLPGKMGAPGIRGEKGDAGLPGLPGERGLDGLPGQKGEAGFPGAPGLPGPVGPKGSAG 1208

Query: 273  S 273
            +
Sbjct: 1209 A 1209



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 68/136 (50%), Gaps = 29/136 (21%)

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           GPPG  G+P   G  GPKG+ G+PG  G+         +G  G PG  G+ G  GLPG P
Sbjct: 727 GPPGKDGLP---GLPGPKGEAGFPGAPGL---------QGPAGLPGLPGMKGNPGLPGAP 774

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---------------- 249
           GL G+PG  G  GI GK GLPG  G  G  G  G+ G+ GP+G                 
Sbjct: 775 GLAGLPGIPGEKGIAGKPGLPGLTGAKGEAGYPGQPGLPGPKGEPGPSTTGPPGPPGFPG 834

Query: 250 -RGKSGINGVPGTPAI 264
            +GK GI G PG P +
Sbjct: 835 LKGKDGIPGAPGLPGL 850



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 92/201 (45%), Gaps = 48/201 (23%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE-------------- 157
            PGL+G  G  G  G KGE+G+ G  G  G PG  G PG  G+PG E              
Sbjct: 848  PGLEGQRGLPGVPGQKGEIGLPGLAGAPGFPGAKGEPGLPGLPGKEGPQGPPGQPGAPGF 907

Query: 158  -GKRGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDGL 201
             G++G +G  G PG  G+ GD G  G                KG  G+PG  G  G  GL
Sbjct: 908  PGQKGDEGLPGLPGVSGMKGDTGLPGVPGLAGPPGQPGFPGQKGQPGFPGVAGAKGEAGL 967

Query: 202  PGEP---------GLDGIPGRNGMDGIPGKDGLPGKDGIPGT---------NGTNGEKGM 243
            PG P         GL G+PG  GM G PG  G PG+DG+PG          NG  GEKG 
Sbjct: 968  PGLPGAPGQKGEQGLAGLPGIPGMKGAPGIPGAPGQDGLPGLPGVKGDRGFNGLPGEKGE 1027

Query: 244  TGPRGNRGKSGINGVPGTPAI 264
             GP    G+ G  G+PG P +
Sbjct: 1028 PGPAARDGEKGEPGLPGQPGL 1048



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 94/226 (41%), Gaps = 74/226 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGV---------------KGERGEKGAPGVVGPPGPQGIPGD 156
           PGLQGP G  G  G KG  G+               KG  G+ G PG+ G  G  G PG 
Sbjct: 750 PGLQGPAGLPGLPGMKGNPGLPGAPGLAGLPGIPGEKGIAGKPGLPGLTGAKGEAGYPGQ 809

Query: 157 EGKRGPKGDM--------------------GYPGPQGIPGDEGKR------GPKGDMGYP 190
            G  GPKG+                     G PG  G+PG EG+R      G KG++G P
Sbjct: 810 PGLPGPKGEPGPSTTGPPGPPGFPGLKGKDGIPGAPGLPGLEGQRGLPGVPGQKGEIGLP 869

Query: 191 GRIGLDGRDGLPGEPGLDGIPGR---------------------NGMDGIPGKDGLPGKD 229
           G  G  G  G  GEPGL G+PG+                      G+ G+PG  G+ G  
Sbjct: 870 GLAGAPGFPGAKGEPGLPGLPGKEGPQGPPGQPGAPGFPGQKGDEGLPGLPGVSGMKGDT 929

Query: 230 GIPGTNG------------TNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G+PG  G              G+ G  G  G +G++G+ G+PG P 
Sbjct: 930 GLPGVPGLAGPPGQPGFPGQKGQPGFPGVAGAKGEAGLPGLPGAPG 975



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 75/169 (44%), Gaps = 35/169 (20%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              + G      E   PG QGP G  G  G KGE G+ G  G+KG  G  G PG  G+PG 
Sbjct: 1347 AGLPGLPGMKGESGLPGPQGPAGLPGLPGLKGEPGLPGFPGQKGETGFPGQPGIPGLPGM 1406

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGK-----------------RGPKGDMGYPGRIGLDGRD 199
                  KGD GYPG  G  G  GK                 RG KG+MG  G  G+ G  
Sbjct: 1407 ------KGDSGYPGAPGRDGAPGKQGEPGPMGPPGAQPIVQRGEKGEMGPMGAPGIRGEK 1460

Query: 200  GLPGEPGLDG---------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            GLPG   LDG           G  G DG PG+ G+PG+ G PG  G  G
Sbjct: 1461 GLPG---LDGLPGPSGPPGFAGAKGRDGFPGQPGMPGEKGAPGLPGFPG 1506



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 79/167 (47%), Gaps = 27/167 (16%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE-- 178
            KG+ G  G  G+ G  G++G PGV G  G  G+PG  G  G  G  G PG  G+PG E  
Sbjct: 836  KGKDGIPGAPGLPGLEGQRGLPGVPGQKGEIGLPGLAGAPGFPGAKGEPGLPGLPGKEGP 895

Query: 179  -------------GKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------DGIPGR 213
                         G++G +G  G PG  G+ G  GLPG PGL             G PG 
Sbjct: 896  QGPPGQPGAPGFPGQKGDEGLPGLPGVSGMKGDTGLPGVPGLAGPPGQPGFPGQKGQPGF 955

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G  G+ GLPG  G PG  G  G  G+ G  G +G  GI G PG
Sbjct: 956  PGVAGAKGEAGLPGLPGAPGQKGEQGLAGLPGIPGMKGAPGIPGAPG 1002



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 74/169 (43%), Gaps = 44/169 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP G  G  G KGE G+ G +G  G PG+ G  G  G+PG  G++G  G  G PG 
Sbjct: 1341 PGKPGPAGLPGLPGMKGESGLPGPQGPAGLPGLPGLKGEPGLPGFPGQKGETGFPGQPGI 1400

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP-----------------------GEPGLD 208
             G+PG       KGD GYP   G  GRDG P                       GE G  
Sbjct: 1401 PGLPGM------KGDSGYP---GAPGRDGAPGKQGEPGPMGPPGAQPIVQRGEKGEMGPM 1451

Query: 209  GIPGRNGMDGIPGKD------------GLPGKDGIPGTNGTNGEKGMTG 245
            G PG  G  G+PG D            G  G+DG PG  G  GEKG  G
Sbjct: 1452 GAPGIRGEKGLPGLDGLPGPSGPPGFAGAKGRDGFPGQPGMPGEKGAPG 1500



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 42/80 (52%)

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           R G  G+DGLPG PG  G  G  G  G+ G  GLPG  G+ G  G  G  G+ G  G  G
Sbjct: 725 RPGPPGKDGLPGLPGPKGEAGFPGAPGLQGPAGLPGLPGMKGNPGLPGAPGLAGLPGIPG 784

Query: 252 KSGINGVPGTPAICAYKRES 271
           + GI G PG P +   K E+
Sbjct: 785 EKGIAGKPGLPGLTGAKGEA 804



 Score = 42.7 bits (99), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 81/201 (40%), Gaps = 71/201 (35%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G   +  E   PGL G  GQKGE   +G  G+ G  G KGAPG+ G PG  G+PG  G  
Sbjct: 957  GVAGAKGEAGLPGLPGAPGQKGE---QGLAGLPGIPGMKGAPGIPGAPGQDGLPGLPGV- 1012

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
              KGD G+    G+PG++G+ GP              RDG  GEPGL            P
Sbjct: 1013 --KGDRGF---NGLPGEKGEPGPAA------------RDGEKGEPGL------------P 1043

Query: 221  GK--------------------------------------DGLPGKDGIPGTNGTNGEKG 242
            G+                                       GLPGK G PG  G  G  G
Sbjct: 1044 GQPGLRGPQGPPGLPGLPGLKGDEGQPGYGAPGLMGEKGLPGLPGKPGRPGAPGPKGLDG 1103

Query: 243  MTGPRGNRGKSGINGVPGTPA 263
              G  G +G++G+ G PG P 
Sbjct: 1104 APGFPGLKGEAGLPGAPGLPG 1124



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 18/90 (20%)

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS--- 253
           G +G PG  G  G PG  G  G PG  G+ G+ G+PG  G   EKG++GP G RGK    
Sbjct: 255 GPEGAPGMKGEKGDPGEAGPRGFPGTPGVAGQPGLPGMKG---EKGLSGPAGPRGKEGRP 311

Query: 254 ------------GINGVPGTPAICAYKRES 271
                       G++G+PG P +   K E+
Sbjct: 312 GLPGPPGFKGDRGLDGLPGVPGLPGQKGEA 341



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 69/156 (44%), Gaps = 52/156 (33%)

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGE---PGLDGIPGRN 214
           +G KGD G PG  G+ G  G  GP G  G PG  G+DG+   GLPG+   PGLDG+PGR 
Sbjct: 420 KGEKGDSGIPGAPGVQGPPGLAGPPGAKGEPGPRGVDGQSIPGLPGKDGRPGLDGLPGRK 479

Query: 215 GMDGIP-----------------------------GKDGLPGKDGIPG------------ 233
           G  G+P                             G+DG PG  GIPG            
Sbjct: 480 GEMGLPGVRGPPGDSLNGLPGPPGPRGPQGPKGYDGRDGAPGLPGIPGPKGDRGGTCAFC 539

Query: 234 TNGTNGEK------GMTGPRGNRGKSGINGVPGTPA 263
            +G  GEK      G+ GP+G RG  GI G  G P 
Sbjct: 540 AHGAKGEKGDAGYAGLPGPQGERGLPGIPGATGAPG 575


>gi|328787787|ref|XP_393523.4| PREDICTED: fibril-forming collagen alpha chain-like [Apis
           mellifera]
          Length = 1501

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 82/175 (46%), Gaps = 39/175 (22%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGP---------------------------QGIPGDE 157
           GAKGE GV GE+G  GAPG +GP GP                            G PG  
Sbjct: 315 GAKGEQGVSGEKGSMGAPGPMGPIGPIGPAGPRGERGREGPPGPPGIRGVDGISGPPGQP 374

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------GLDGIP 211
           G  G  G  G+PG  GI GD+G +GPKG  G  G  G  GR G PGE       G DGIP
Sbjct: 375 GAVGKPGSPGFPGNPGIKGDQGAQGPKGSQGIQGPRGETGRPGQPGESGPQGPQGKDGIP 434

Query: 212 GRNGMDGIPGKDGLP------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G PG  G P      G+ GIPG  G  G KGM G  G RG  G NGV G
Sbjct: 435 GEKGSTGAPGLVGAPGFPGARGQAGIPGNPGIPGAKGMPGFPGERGFKGDNGVKG 489



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 89/172 (51%), Gaps = 24/172 (13%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           PPG  G +G+ G  G  G  G+KG++G    KG+ G+ GP G  G PG  G+ GP+G  G
Sbjct: 370 PPGQPGAVGKPGSPGFPGNPGIKGDQGAQGPKGSQGIQGPRGETGRPGQPGESGPQGPQG 429

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
                GIPG++G  G  G +G PG  G  G+ G+PG P   GIPG  GM G PG+ G  G
Sbjct: 430 K---DGIPGEKGSTGAPGLVGAPGFPGARGQAGIPGNP---GIPGAKGMPGFPGERGFKG 483

Query: 228 KDGIPG---------------TNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            +G+ G                 G  G++GM GP G  G +G  G PG P +
Sbjct: 484 DNGVKGDAGIPGPRGLPGPPGNEGKRGKRGMRGPIGTPGPTGERGAPGAPGL 535



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 92/177 (51%), Gaps = 24/177 (13%)

Query: 113 GLQGPIGQKGEIGAKGEM---------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           G+QGP G+ G  G  GE          G+ GE+G  GAPG+VG P   G PG  G+ G  
Sbjct: 405 GIQGPRGETGRPGQPGESGPQGPQGKDGIPGEKGSTGAPGLVGAP---GFPGARGQAGIP 461

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL------------DGRDGLPGEPGLDGIP 211
           G+ G PG +G+PG  G+RG KGD G  G  G+            +G+ G  G  G  G P
Sbjct: 462 GNPGIPGAKGMPGFPGERGFKGDNGVKGDAGIPGPRGLPGPPGNEGKRGKRGMRGPIGTP 521

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G PG  GLPG DG  G+ G +G++G  GP G +G  G  G PG+P +   +
Sbjct: 522 GPTGERGAPGAPGLPGPDGPMGSKGQSGDRGPIGPIGPKGVIGDPGRPGSPGLQGTR 578



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 79/163 (48%), Gaps = 33/163 (20%)

Query: 119 GQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           G++G+ G +G +G  G   ERG  GAPG+ GP GP G  G  G RGP G +   GP+G+ 
Sbjct: 507 GKRGKRGMRGPIGTPGPTGERGAPGAPGLPGPDGPMGSKGQSGDRGPIGPI---GPKGVI 563

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG-------- 227
           GD G+         PG  GL G  GL G PG  G PG  G  GI G DG PG        
Sbjct: 564 GDPGR---------PGSPGLQGTRGLMGRPGAPGKPGNPGERGIQGADGKPGEQGPPGLQ 614

Query: 228 ----------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                     + G PG  G  GE G  GP G RG +G  G PG
Sbjct: 615 GLPGPLGLPGEKGYPGEPGKAGEPGNPGPSGPRGDTGKEGAPG 657



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 87/166 (52%), Gaps = 27/166 (16%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD---E 178
           GE GA G  G+ G RGE G  G+ GPPG  G+ GD+G  GP G +G PG +G PG+   +
Sbjct: 723 GERGAAGGPGLMGPRGEPGVQGLDGPPGLPGVKGDKGISGPSGLVGLPGLRGAPGESGPK 782

Query: 179 GKRGPKGDMGY---PGRIG------------------LDGRDGLPGEPGLDGIPGRNGM- 216
           G+RGP G +G    PGRIG                    G  GLPG PG  G PG +G  
Sbjct: 783 GERGPIGPVGLEGPPGRIGERGPQGQIGPPGPPGEPAERGDPGLPGLPGEIGAPGNSGER 842

Query: 217 --DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G+ G  G PG  G+ G  G  G++G  G +G++G SG  G PG
Sbjct: 843 GPQGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGDQGNSGPPGNPG 888



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 87/207 (42%), Gaps = 57/207 (27%)

Query: 116 GPIGQKGEIG------AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
           GPIG KG IG      + G  G +G  G  GAPG  G PG +GI G +GK G        
Sbjct: 555 GPIGPKGVIGDPGRPGSPGLQGTRGLMGRPGAPGKPGNPGERGIQGADGKPGEQGPPGLQ 614

Query: 163 -----------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG-- 209
                      KG  G PG  G PG+ G  GP+GD G   + G  G  G PG  G DG  
Sbjct: 615 GLPGPLGLPGEKGYPGEPGKAGEPGNPGPSGPRGDTG---KEGAPGPQGSPGPSGTDGER 671

Query: 210 -------------IPGRNGMDGIPGKDGLP---------------GKDGIPGTNGTNGEK 241
                         PG  G  G PGKDG P               G+ G PG  G  G  
Sbjct: 672 GPPGSPGPRGFQGFPGATGNAGTPGKDGEPGVQGPPGSPGVPGNRGERGFPGERGAAGGP 731

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYK 268
           G+ GPRG  G  G++G PG P +   K
Sbjct: 732 GLMGPRGEPGVQGLDGPPGLPGVKGDK 758



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 95/213 (44%), Gaps = 54/213 (25%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------------------------EIGAKGEMG 131
           LV + G   +  E  P G +GPIG  G                        E   +G+ G
Sbjct: 766 LVGLPGLRGAPGESGPKGERGPIGPVGLEGPPGRIGERGPQGQIGPPGPPGEPAERGDPG 825

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------KGDMGYPGPQ------GIPG 176
           + G  GE GAPG  G  GPQG+ G +G  GP         KGD GYPG +      G PG
Sbjct: 826 LPGLPGEIGAPGNSGERGPQGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGDQGNSGPPG 885

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG---------------MDGIPG 221
           + G+ GP+G +G  G  G+ G  G  GEPG+ G PG  G               + G+PG
Sbjct: 886 NPGEIGPQGSIGLTGSKGIRGEPGARGEPGIIGPPGVPGNIGAPGPPGAIGPPGLSGLPG 945

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G+ G PG  G  G  G+ G  GN+G+SG
Sbjct: 946 SKGNTGEAGRPGNPGPIGNPGLPGADGNKGESG 978



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 91/187 (48%), Gaps = 30/187 (16%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G    T E   PG  G  G  G +G+KG+ G +G  G  G  GV+G PG  G PG +G R
Sbjct: 519 GTPGPTGERGAPGAPGLPGPDGPMGSKGQSGDRGPIGPIGPKGVIGDPGRPGSPGLQGTR 578

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------------IGLDGRDGLPGEPGLD 208
              G MG PG  G PG+ G+RG +G  G PG             +GL G  G PGEPG  
Sbjct: 579 ---GLMGRPGAPGKPGNPGERGIQGADGKPGEQGPPGLQGLPGPLGLPGEKGYPGEPGKA 635

Query: 209 GIPGR---NGMDGIPGKDGLPGKDGIPGTNGTNGE------------KGMTGPRGNRGKS 253
           G PG    +G  G  GK+G PG  G PG +GT+GE            +G  G  GN G  
Sbjct: 636 GEPGNPGPSGPRGDTGKEGAPGPQGSPGPSGTDGERGPPGSPGPRGFQGFPGATGNAGTP 695

Query: 254 GINGVPG 260
           G +G PG
Sbjct: 696 GKDGEPG 702



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 78/145 (53%), Gaps = 18/145 (12%)

Query: 104  NSTKEYCPPGLQGPIGQKGEIGAKGE---------------MGVKGERGEKGAPGVVGPP 148
             S+ +  PPG+ G  G KG  GA G+                G  G  GE+G+ G  GP 
Sbjct: 1056 GSSGKPGPPGIAGRPGDKGPPGAVGQTGLPGSPGLPGPPGQAGSPGSAGERGSKGETGP- 1114

Query: 149  GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              QG+ G +G RG  G +G  GP+G  G+EG++G KG  G+ G  GL G  G PGE G+ 
Sbjct: 1115 --QGVEGQQGPRGKPGPIGLQGPKGERGEEGQKGLKGHRGFTGLQGLPGPTGPPGEKGIP 1172

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPG 233
            G+PG  G DG PG  G PG+DG PG
Sbjct: 1173 GLPGLPGKDGEPGSRGSPGRDGNPG 1197



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 75/169 (44%), Gaps = 36/169 (21%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------------------QGIPGDEGKR 160
           G+ GE G  G  G +G+ G++GAPG  G PGP                  QG PG  G  
Sbjct: 633 GKAGEPGNPGPSGPRGDTGKEGAPGPQGSPGPSGTDGERGPPGSPGPRGFQGFPGATGNA 692

Query: 161 GPKGDMGYPGPQ---------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G  G  G PG Q               G PG+ G  G  G MG  G  G+ G DG    P
Sbjct: 693 GTPGKDGEPGVQGPPGSPGVPGNRGERGFPGERGAAGGPGLMGPRGEPGVQGLDG---PP 749

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           GL G+ G  G+ G  G  GLPG  G PG +G  GE+G  GP G  G  G
Sbjct: 750 GLPGVKGDKGISGPSGLVGLPGLRGAPGESGPKGERGPIGPVGLEGPPG 798



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 82/203 (40%), Gaps = 72/203 (35%)

Query: 112  PGLQGPIGQKGEIGAKGE------------------------------MGVKGERGEKGA 141
            PG  GPIG +G  GA GE                              +G +G  G+ G 
Sbjct: 1004 PGPSGPIGARGIRGAPGESGTPGKPGPEGPPGLVGQIGPIGPPGPPGEIGAEGSSGKPGP 1063

Query: 142  PGVVGPPGPQGIP---------------------GDEGKRGPKGDMGYPGPQGIPGDEGK 180
            PG+ G PG +G P                     G  G  G +G  G  GPQG+   EG+
Sbjct: 1064 PGIAGRPGDKGPPGAVGQTGLPGSPGLPGPPGQAGSPGSAGERGSKGETGPQGV---EGQ 1120

Query: 181  RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGL 225
            +GP+G    PG IGL G  G  GE G  G+ G  G                 GIPG  GL
Sbjct: 1121 QGPRGK---PGPIGLQGPKGERGEEGQKGLKGHRGFTGLQGLPGPTGPPGEKGIPGLPGL 1177

Query: 226  PGKDGIPGTNGTNGEKGMTGPRG 248
            PGKDG PG+ G+ G  G  GP G
Sbjct: 1178 PGKDGEPGSRGSPGRDGNPGPIG 1200



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 73/149 (48%), Gaps = 21/149 (14%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-P--------- 150
            G         PPG  G IG +G IG  G  G++GE G +G PG++GPPG P         
Sbjct: 873  GLKGDQGNSGPPGNPGEIGPQGSIGLTGSKGIRGEPGARGEPGIIGPPGVPGNIGAPGPP 932

Query: 151  --------QGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
                     G+PG +G  G  G  G PGP    G+PG +G +G  G  G PG  G  G  
Sbjct: 933  GAIGPPGLSGLPGSKGNTGEAGRPGNPGPIGNPGLPGADGNKGESGSQGPPGIPGPQGPQ 992

Query: 200  GLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G PGE GL G+PG +G  G  G  G PG+
Sbjct: 993  GSPGERGLPGLPGPSGPIGARGIRGAPGE 1021



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 70/161 (43%), Gaps = 36/161 (22%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD--------- 177
           KG  G  G+ GE G PG  GP       GD GK G  G  G PGP G  G+         
Sbjct: 626 KGYPGEPGKAGEPGNPGPSGP------RGDTGKEGAPGPQGSPGPSGTDGERGPPGSPGP 679

Query: 178 ---EGKRGPKGDMGYPGRIGLD---------------GRDGLPGEPGLDGIPGRNGMDGI 219
              +G  G  G+ G PG+ G                 G  G PGE G  G PG  G  G 
Sbjct: 680 RGFQGFPGATGNAGTPGKDGEPGVQGPPGSPGVPGNRGERGFPGERGAAGGPGLMGPRGE 739

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  GL   DG PG  G  G+KG++GP G  G  G+ G PG
Sbjct: 740 PGVQGL---DGPPGLPGVKGDKGISGPSGLVGLPGLRGAPG 777



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 91/194 (46%), Gaps = 38/194 (19%)

Query: 89   NAYSRIP--LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG 146
            N+  R P  L  +QGF         PG QG IG  G  G +G  G+KG++G  G PG  G
Sbjct: 838  NSGERGPQGLQGLQGF---------PGPQGLIGLPGLKGDRGYPGLKGDQGNSGPPGNPG 888

Query: 147  PPGPQ---GIPGDEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDM------GYPGRIG 194
              GPQ   G+ G +G RG  G  G P   GP G+PG+ G  GP G +      G PG  G
Sbjct: 889  EIGPQGSIGLTGSKGIRGEPGARGEPGIIGPPGVPGNIGAPGPPGAIGPPGLSGLPGSKG 948

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDG---------------LPGKDGIPGTNGTNG 239
              G  G PG PG  G PG  G DG  G+ G                PG+ G+PG  G +G
Sbjct: 949  NTGEAGRPGNPGPIGNPGLPGADGNKGESGSQGPPGIPGPQGPQGSPGERGLPGLPGPSG 1008

Query: 240  EKGMTGPRGNRGKS 253
              G  G RG  G+S
Sbjct: 1009 PIGARGIRGAPGES 1022



 Score = 46.6 bits (109), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 73/201 (36%), Gaps = 63/201 (31%)

Query: 131 GVKGERGE---KGAPGVVGP---------------------PGPQGIPGDEGKRGPKGDM 166
           G  G  GE    G PG VGP                     PG  G  G++G  G KG M
Sbjct: 270 GKDGNTGEDGEPGPPGSVGPVGPRGLPGLPGLPGMKGHRGFPGLDGAKGEQGVSGEKGSM 329

Query: 167 GYPGP---------------------------------QGIPGDEGKRGPKGDMGYPGRI 193
           G PGP                                  G PG  G  G  G  G+PG  
Sbjct: 330 GAPGPMGPIGPIGPAGPRGERGREGPPGPPGIRGVDGISGPPGQPGAVGKPGSPGFPGNP 389

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPR 247
           G+ G  G  G  G  GI G  G  G PG+       G  GKDGIPG  G+ G  G+ G  
Sbjct: 390 GIKGDQGAQGPKGSQGIQGPRGETGRPGQPGESGPQGPQGKDGIPGEKGSTGAPGLVGAP 449

Query: 248 GNRGKSGINGVPGTPAICAYK 268
           G  G  G  G+PG P I   K
Sbjct: 450 GFPGARGQAGIPGNPGIPGAK 470


>gi|195438521|ref|XP_002067185.1| GK24856 [Drosophila willistoni]
 gi|194163270|gb|EDW78171.1| GK24856 [Drosophila willistoni]
          Length = 1784

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 108/233 (46%), Gaps = 68/233 (29%)

Query: 93  RIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---------------VKGERG 137
           R+P    +G   +  +   PG  GPIGQKGEIG  GE G               + G RG
Sbjct: 760 RVPAKGNKGDRGAPGQ---PGQNGPIGQKGEIGFSGEKGFTGPQGPPGPVGPRGITGPRG 816

Query: 138 EKGAPGVVGPPGP------QGIPGDEGKRGPKGDMGY-----PGPQGIP----------- 175
           EKG PG +G PG       +G+PG  G+RG KG+ G      PGPQG+            
Sbjct: 817 EKGNPGPLGAPGNPGKDGLRGLPGRNGERGQKGEQGISVAGPPGPQGLDGLSGLKGDRGP 876

Query: 176 -GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------------LDGI 210
            G  G+ GP+G++GYPG  G  G  G PG+PG                        +DGI
Sbjct: 877 VGSPGQPGPEGNIGYPGDKGESGLPGQPGQPGSIGEKGDVGPLGPPGHPGPPGLPGMDGI 936

Query: 211 PGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G NG+ G PG     GLPG  G  G NG +G KG TG  G  GK G  GVPG
Sbjct: 937 RGLNGVKGEPGNPGLVGLPGNKGERGANGIDGPKGFTGVNGAPGKRGPPGVPG 989



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/151 (45%), Positives = 90/151 (59%), Gaps = 6/151 (3%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
            GL G  G+ G  GA G  G+KG+RG  G    PG+VG PGP G  G  G+RG  G  G+ 
Sbjct: 1305 GLPGRAGKNGREGAPGRPGIKGDRGLAGLPGTPGLVGLPGPIGPAGARGERGLTGTPGFA 1364

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLP 226
            G  G+ G +G++G +G  G  G  GL+G +G  G+ G    DG PG NG+ G+ G  GLP
Sbjct: 1365 GQDGLNGAQGQKGDRGIQGPKGERGLNGFEGQKGDKGAQGQDGPPGLNGLPGLKGDLGLP 1424

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G +G PG  G  GEKG TGP+G  G+ G++G
Sbjct: 1425 GFEGAPGAPGAIGEKGFTGPKGRDGRDGLHG 1455



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/152 (45%), Positives = 86/152 (56%), Gaps = 16/152 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
            PG +G  GQKGE G +GE G+ G  G KG  G+ GP G  G+   PG +G  GP+G+ GY
Sbjct: 1236 PGERGFTGQKGEQGERGEQGIVGYTGAKGERGLDGPRGLDGLHGAPGLKGDAGPQGEQGY 1295

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PGP            KG+ G PGR G +GR+G PG PG+ G  G  G+ G PG  GLPG 
Sbjct: 1296 PGPV----------VKGEKGLPGRAGKNGREGAPGRPGIKGDRGLAGLPGTPGLVGLPGP 1345

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                G  G  GE+G+TG  G  G+ G+NG  G
Sbjct: 1346 I---GPAGARGERGLTGTPGFAGQDGLNGAQG 1374



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 88/173 (50%), Gaps = 21/173 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  GQKG+ G  G  G KGE G KG  G      P G+ GD+G RG  G  G PG 
Sbjct: 539 PGIVGAPGQKGDAGRPGNPGDKGEMGPKGEIGGKCSSCPPGLKGDKGDRGLDGLTGNPGA 598

Query: 172 QGIPGDEGKRGPKGD------MGYPGRIGLDGRDGLPGEPGLDGIP-------------- 211
           +G PG+ G  G +GD      MG PG  G+DGR G+PG  G  G P              
Sbjct: 599 RGPPGERGFVGERGDDGINGLMGPPGEKGVDGRPGVPGAVGAPGAPAFIDLSLIAVEKGA 658

Query: 212 -GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G PG  G  G++G PG  G+ GE G+ G +G  G +G +G+PG P 
Sbjct: 659 KGERGSAGYPGVKGERGENGQPGLPGSKGEIGIKGEKGFTGPAGTDGLPGAPG 711



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 90/190 (47%), Gaps = 41/190 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++G +G  G  G  G  G+ GE+G +G PG  G    QG PGD  ++G KG+ G PGP+
Sbjct: 1022 GIKGDVGPAGAPGQNGLDGLFGEKGNQGLPGFDGA---QGEPGDASEKGQKGEPGTPGPR 1078

Query: 173  GIPGDEGKRGPKGDMGYPG-----------------RIGLDGRDGLPG---EPGLDG--- 209
            G PG  G+ G  G+ G PG                 R GLDG DG PG   EPGL G   
Sbjct: 1079 GEPGFTGEPGQPGEKGVPGVPIHGRPGAPGEKGDAGRNGLDGLDGQPGQKGEPGLSGYAG 1138

Query: 210  ------------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---TGPRGNRGKSG 254
                         PG  G+DG PG  G  G  G PG  G  GE G+   TG +GN G SG
Sbjct: 1139 LKGDKGSLGRPGAPGAPGLDGQPGLQGATGAPGYPGVQGFKGEAGVPGFTGEKGNTGPSG 1198

Query: 255  INGVPGTPAI 264
              G  G P  
Sbjct: 1199 PAGFNGPPGF 1208



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 82/155 (52%), Gaps = 30/155 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G+KG+IG  G  G+ G++G+KG PG +GP       GD+G+RG +G  G PG 
Sbjct: 97  PGPEGPTGEKGQIGYAGPEGLPGDKGQKGDPGPLGP------RGDKGERGSQGRPGLPGV 150

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------------------PGR 213
            GI   +G  G  G  G PG+ G DG DGLPG PGL G+                  P +
Sbjct: 151 GGI---QGTAGNPGAAGAPGKDGCDGLDGLPGLPGLSGMAGPRGLPGGPGVKGDKGEPAK 207

Query: 214 NGMD---GIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              D   G  G+ G  G+ G PG +G+ G+KG  G
Sbjct: 208 ENGDYAKGEKGEPGFAGRSGFPGPDGSRGDKGERG 242



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 3/94 (3%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGLDGRDGLPGEP 205
           G +G+PG EG  G KG +GY GP+G+PGD+G++   GP G  G  G  G  GR GLPG  
Sbjct: 92  GSRGMPGPEGPTGEKGQIGYAGPEGLPGDKGQKGDPGPLGPRGDKGERGSQGRPGLPGVG 151

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
           G+ G  G  G  G PGKDG  G DG+PG  G +G
Sbjct: 152 GIQGTAGNPGAAGAPGKDGCDGLDGLPGLPGLSG 185



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/191 (40%), Positives = 97/191 (50%), Gaps = 35/191 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGER--GEKGAPGVVGPPGPQGI------PGDEGKRGPK 163
           PG  G  G KGE G KG +GV G+   G  G PG+VG PG +G       PGD+G+ GPK
Sbjct: 507 PGYNGLKGAKGERGFKGNVGVPGDSKLGRPGLPGIVGAPGQKGDAGRPGNPGDKGEMGPK 566

Query: 164 GDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G++G      P G+ GD+G RG  G  G PG  G  G  G  GE G DGI   NG+ G P
Sbjct: 567 GEIGGKCSSCPPGLKGDKGDRGLDGLTGNPGARGPPGERGFVGERGDDGI---NGLMGPP 623

Query: 221 GKDGLPGKDGIPGTNGTNG------------EKGMTGPRGN---------RGKSGINGVP 259
           G+ G+ G+ G+PG  G  G            EKG  G RG+         RG++G  G+P
Sbjct: 624 GEKGVDGRPGVPGAVGAPGAPAFIDLSLIAVEKGAKGERGSAGYPGVKGERGENGQPGLP 683

Query: 260 GTPAICAYKRE 270
           G+      K E
Sbjct: 684 GSKGEIGIKGE 694



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 93/185 (50%), Gaps = 32/185 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++G  G KGE G  G +G+ G +GE+GA G+ GP G  G+ G  GKRGP G    PG  
Sbjct: 935  GIRGLNGVKGEPGNPGLVGLPGNKGERGANGIDGPKGFTGVNGAPGKRGPPG---VPGLS 991

Query: 173  GIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G+ GD+G RG  G+               MG  G +G  G    PG+ GLDG+ G  G  
Sbjct: 992  GLKGDKGARGLTGNDGPIGGRGPPGPPGFMGIKGDVGPAG---APGQNGLDGLFGEKGNQ 1048

Query: 218  GIPGKDGL---------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP--GTPAICA 266
            G+PG DG           G+ G PGT G  GE G TG  G  G+ G+ GVP  G P    
Sbjct: 1049 GLPGFDGAQGEPGDASEKGQKGEPGTPGPRGEPGFTGEPGQPGEKGVPGVPIHGRPGAPG 1108

Query: 267  YKRES 271
             K ++
Sbjct: 1109 EKGDA 1113



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 94/205 (45%), Gaps = 60/205 (29%)

Query: 95  PLVAMQGFCNSTKEYCPPGLQGPIGQKG---------EIGAKGEMGVKGERGEKGAPGVV 145
           P   + G C+S    CPPGL+G  G +G           G  GE G  GERG+ G  G++
Sbjct: 565 PKGEIGGKCSS----CPPGLKGDKGDRGLDGLTGNPGARGPPGERGFVGERGDDGINGLM 620

Query: 146 GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG------------DEGKRGPKGDMGYPGRI 193
           GPPG +G+          G  G PG  G PG            ++G +G +G  GYPG  
Sbjct: 621 GPPGEKGV---------DGRPGVPGAVGAPGAPAFIDLSLIAVEKGAKGERGSAGYPGVK 671

Query: 194 GLDGRDGLPGEP---------------------GLDGIPGRNGMDGIPGKD--GLPGKDG 230
           G  G +G PG P                     GL G PGR+G DG PG+   G PGK G
Sbjct: 672 GERGENGQPGLPGSKGEIGIKGEKGFTGPAGTDGLPGAPGRDGFDGRPGQSVKGEPGKAG 731

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGI 255
           +   +G  G+ G+TG  G +G++G 
Sbjct: 732 L---DGLKGDTGLTGETGQKGEAGT 753



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 85/170 (50%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG QG  GQKG IG  G  G +G   ++GEKG  G  GP GP G  G  G  GP+G  G 
Sbjct: 430 PGPQGYPGQKGGIGVPGRQGGEGPPGQKGEKGIAGRGGPQGPLGPVGHTGPPGPEGQKGE 489

Query: 169 P-----------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           P           G  G+PG  G +G KG+ G+ G +G+ G   L G PGL GI G  G  
Sbjct: 490 PGLPGSSIEGLKGEDGLPGYNGLKGAKGERGFKGNVGVPGDSKL-GRPGLPGIVGAPGQK 548

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEK------GMTGPRGNRGKSGINGVPGT 261
           G  G+ G PG  G  G  G  G K      G+ G +G+RG  G+ G PG 
Sbjct: 549 GDAGRPGNPGDKGEMGPKGEIGGKCSSCPPGLKGDKGDRGLDGLTGNPGA 598



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 112/228 (49%), Gaps = 27/228 (11%)

Query: 113  GLQGPIGQKGE---IGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
            GL G  GQKG+    G KGE G+   +G++G+KGA G  GPPG  G+PG       KGD+
Sbjct: 1368 GLNGAQGQKGDRGIQGPKGERGLNGFEGQKGDKGAQGQDGPPGLNGLPGL------KGDL 1421

Query: 167  GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGLDGIPGRNGMDGIP 220
            G PG +G PG  G  G KG  G  GR   DGRDGL       GEPGL   PG  G  G P
Sbjct: 1422 GLPGFEGAPGAPGAIGEKGFTGPKGR---DGRDGLHGQRGQKGEPGLLPPPGPKGEPGHP 1478

Query: 221  GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSET 280
            G+DG  G+ G PG  G  G +G  G +G RG  G+ G PG P     + E   +      
Sbjct: 1479 GRDGQKGEVGPPGERGLTGIQGERGEKGERGFIGLTGQPGRPGAKGERGEQGLIGREGAI 1538

Query: 281  SQLLI---PPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIW 325
             ++ I   P     S   + +  +V R   N ++   A GH   + +W
Sbjct: 1539 GEIGIKGEPGVPCSSAQDYLTGILVTRHSQNDQVPTCAAGH---TQLW 1583



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 88/183 (48%), Gaps = 28/183 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           G  GP G  G +G  G  G +G++GE G PG  + G  G  G+PG  G +G KG+ G+ G
Sbjct: 464 GRGGPQGPLGPVGHTGPPGPEGQKGEPGLPGSSIEGLKGEDGLPGYNGLKGAKGERGFKG 523

Query: 171 PQGIPGDE-----------GKRGPKGDMGYPGRIGLDGRDGLPGE---------PGLDGI 210
             G+PGD            G  G KGD G PG  G  G  G  GE         PGL G 
Sbjct: 524 NVGVPGDSKLGRPGLPGIVGAPGQKGDAGRPGNPGDKGEMGPKGEIGGKCSSCPPGLKGD 583

Query: 211 PGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG---KSGINGVPGTPAI 264
            G  G+DG+   PG  G PG+ G  G  G +G  G+ GP G +G   + G+ G  G P  
Sbjct: 584 KGDRGLDGLTGNPGARGPPGERGFVGERGDDGINGLMGPPGEKGVDGRPGVPGAVGAPGA 643

Query: 265 CAY 267
            A+
Sbjct: 644 PAF 646



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 88/185 (47%), Gaps = 34/185 (18%)

Query: 111 PPGLQG---------PIGQKGEIGAKGEMGVKGERGEKGAPG--VVGPPGPQGIPGDEGK 159
           PPG +G         P G  G +G  G  G +G++GE G PG  + G  G  G+PG  G 
Sbjct: 453 PPGQKGEKGIAGRGGPQGPLGPVGHTGPPGPEGQKGEPGLPGSSIEGLKGEDGLPGYNGL 512

Query: 160 RGPKGDMGYPGPQGIPGDE-----------GKRGPKGDMGYPGRIGLDGRDGLPGE---- 204
           +G KG+ G+ G  G+PGD            G  G KGD G PG  G  G  G  GE    
Sbjct: 513 KGAKGERGFKGNVGVPGDSKLGRPGLPGIVGAPGQKGDAGRPGNPGDKGEMGPKGEIGGK 572

Query: 205 -----PGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                PGL G  G  G+DG+   PG  G PG+ G  G  G +G  G+ GP G +G  G  
Sbjct: 573 CSSCPPGLKGDKGDRGLDGLTGNPGARGPPGERGFVGERGDDGINGLMGPPGEKGVDGRP 632

Query: 257 GVPGT 261
           GVPG 
Sbjct: 633 GVPGA 637



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 76/151 (50%), Gaps = 12/151 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G  GE G  G  G  G++G  G PG  G  GP   PG +G++G  G  G  GP
Sbjct: 415 PGMHGPQGLNGEDGLPGPQGYPGQKGGIGVPGRQGGEGP---PGQKGEKGIAGRGGPQGP 471

Query: 172 QGIPGDEGKRGPKGDMGYPGRI-----GLDGRDGLPGEPGLDGIPGRNGMD---GIPGKD 223
            G  G  G  GP+G  G PG       GL G DGLPG  GL G  G  G     G+PG  
Sbjct: 472 LGPVGHTGPPGPEGQKGEPGLPGSSIEGLKGEDGLPGYNGLKGAKGERGFKGNVGVPGDS 531

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            L G+ G+PG  G  G+KG  G  GN G  G
Sbjct: 532 KL-GRPGLPGIVGAPGQKGDAGRPGNPGDKG 561



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 89/192 (46%), Gaps = 48/192 (25%)

Query: 113 GLQGPIGQKGEIGAKGEMG----------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
           GL+G  G  GE G KGE G           KG +G++GAPG          PG  G  G 
Sbjct: 734 GLKGDTGLTGETGQKGEAGTCAADALRVPAKGNKGDRGAPGQ---------PGQNGPIGQ 784

Query: 163 KGDMGYPGPQGIPGDEGKR---------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           KG++G+ G +G  G +G           GP+G+ G PG +G  G    PG+ GL G+PGR
Sbjct: 785 KGEIGFSGEKGFTGPQGPPGPVGPRGITGPRGEKGNPGPLGAPGN---PGKDGLRGLPGR 841

Query: 214 NG-----------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------RGKSGIN 256
           NG           + G PG  GL G  G+ G  G  G  G  GP GN      +G+SG+ 
Sbjct: 842 NGERGQKGEQGISVAGPPGPQGLDGLSGLKGDRGPVGSPGQPGPEGNIGYPGDKGESGLP 901

Query: 257 GVPGTPAICAYK 268
           G PG P     K
Sbjct: 902 GQPGQPGSIGEK 913



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 89/208 (42%), Gaps = 59/208 (28%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  GQKGE G  G  G+KG++G  G PG  G PG  G PG +G     G  GYPG Q
Sbjct: 1120 GLDGQPGQKGEPGLSGYAGLKGDKGSLGRPGAPGAPGLDGQPGLQGA---TGAPGYPGVQ 1176

Query: 173  ------GIP---GDEGKRGP---------------------------------KGDMGYP 190
                  G+P   G++G  GP                                 +GD+G P
Sbjct: 1177 GFKGEAGVPGFTGEKGNTGPSGPAGFNGPPGFKGERGLPGPPGPAPIINPDDLRGDVGAP 1236

Query: 191  GRIGLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
            G  G  G+ G  GE G  GI       G  G+DG  G DGL G  G+ G  G  GE+G  
Sbjct: 1237 GERGFTGQKGEQGERGEQGIVGYTGAKGERGLDGPRGLDGLHGAPGLKGDAGPQGEQGYP 1296

Query: 245  GP--------RGNRGKSGINGVPGTPAI 264
            GP         G  GK+G  G PG P I
Sbjct: 1297 GPVVKGEKGLPGRAGKNGREGAPGRPGI 1324



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 85/195 (43%), Gaps = 56/195 (28%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPP----------------------GPQGIPGD 156
           G +GE G  G  G  G++GE G PG  G                        GP+G PG 
Sbjct: 358 GDRGETGLHGRPGQPGQKGEAGRPGNSGERGLLGPPGPPGGGRGQPGAPGPQGPRGYPGM 417

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G +G  G+ G PGPQG PG       KG +G PGR    G +G PG+ G  GI GR G 
Sbjct: 418 HGPQGLNGEDGLPGPQGYPGQ------KGGIGVPGR---QGGEGPPGQKGEKGIAGRGGP 468

Query: 217 D---------------------GIPGK--DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                                 G+PG   +GL G+DG+PG NG  G KG  G +GN G  
Sbjct: 469 QGPLGPVGHTGPPGPEGQKGEPGLPGSSIEGLKGEDGLPGYNGLKGAKGERGFKGNVGVP 528

Query: 254 GIN--GVPGTPAICA 266
           G +  G PG P I  
Sbjct: 529 GDSKLGRPGLPGIVG 543



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 97/225 (43%), Gaps = 56/225 (24%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGA------------------------------- 126
             + G      +   PGL G  G KG+ G+                               
Sbjct: 1117 GLDGLDGQPGQKGEPGLSGYAGLKGDKGSLGRPGAPGAPGLDGQPGLQGATGAPGYPGVQ 1176

Query: 127  --KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------------KGDMGYP 169
              KGE GV G  GEKG  G  GP G  G PG +G+RG                +GD+G P
Sbjct: 1177 GFKGEAGVPGFTGEKGNTGPSGPAGFNGPPGFKGERGLPGPPGPAPIINPDDLRGDVGAP 1236

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---PGRNGMDGIPGKDGLP 226
            G +G  G +G++G +G+ G  G  G  G  GL G  GLDG+   PG  G  G  G+ G P
Sbjct: 1237 GERGFTGQKGEQGERGEQGIVGYTGAKGERGLDGPRGLDGLHGAPGLKGDAGPQGEQGYP 1296

Query: 227  -----GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                 G+ G+PG  G NG +G  G  G +G  G+ G+PGTP +  
Sbjct: 1297 GPVVKGEKGLPGRAGKNGREGAPGRPGIKGDRGLAGLPGTPGLVG 1341



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 90/197 (45%), Gaps = 39/197 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------------- 156
            G +GP+G  G+ G +G +G  G++GE G PG  G PG  G  GD                
Sbjct: 872  GDRGPVGSPGQPGPEGNIGYPGDKGESGLPGQPGQPGSIGEKGDVGPLGPPGHPGPPGLP 931

Query: 157  -----EGKRGPKGDMGYPGPQGIPGDEGKRGPK---GDMGYPGRIGLDGRDGLPGEPGLD 208
                  G  G KG+ G PG  G+PG++G+RG     G  G+ G  G  G+ G PG PGL 
Sbjct: 932  GMDGIRGLNGVKGEPGNPGLVGLPGNKGERGANGIDGPKGFTGVNGAPGKRGPPGVPGLS 991

Query: 209  GIPGRNGMDGIPGKD---------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G+ G  G  G+ G D               G+ G  G  G  G NG  G+ G +GN+G  
Sbjct: 992  GLKGDKGARGLTGNDGPIGGRGPPGPPGFMGIKGDVGPAGAPGQNGLDGLFGEKGNQGLP 1051

Query: 254  GINGVPGTPAICAYKRE 270
            G +G  G P   + K +
Sbjct: 1052 GFDGAQGEPGDASEKGQ 1068



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 89/189 (47%), Gaps = 35/189 (18%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------------VG 146
            P G  G  G  G+ G  G  G+ G +G+KGA G+                        VG
Sbjct: 969  PKGFTGVNGAPGKRGPPGVPGLSGLKGDKGARGLTGNDGPIGGRGPPGPPGFMGIKGDVG 1028

Query: 147  PPGPQGIPGDEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
            P G  G  G +G  G KG+ G P   G QG PGD  ++G KG+ G PG  G  G  G PG
Sbjct: 1029 PAGAPGQNGLDGLFGEKGNQGLPGFDGAQGEPGDASEKGQKGEPGTPGPRGEPGFTGEPG 1088

Query: 204  EPGLDGIPGR--NGMDGIP------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            +PG  G+PG   +G  G P      G++GL G DG PG  G  G  G  G +G++G  G 
Sbjct: 1089 QPGEKGVPGVPIHGRPGAPGEKGDAGRNGLDGLDGQPGQKGEPGLSGYAGLKGDKGSLGR 1148

Query: 256  NGVPGTPAI 264
             G PG P +
Sbjct: 1149 PGAPGAPGL 1157



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 86/186 (46%), Gaps = 40/186 (21%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------PPGPQGIPGDEGKRGPK 163
           GP G+KG +G  GE G  G++GEKG PG  G            P G +G  G+ G  G  
Sbjct: 310 GPYGEKGGLGPAGEPGHDGQKGEKGLPGGAGDRGRQGGFGPPGPSGQKGDRGETGLHGRP 369

Query: 164 GDMGYPGPQGIPGDEGK----------------------RGPKGDMGYPGRIGLDGRDGL 201
           G  G  G  G PG+ G+                      +GP+G  G  G  GL+G DGL
Sbjct: 370 GQPGQKGEAGRPGNSGERGLLGPPGPPGGGRGQPGAPGPQGPRGYPGMHGPQGLNGEDGL 429

Query: 202 ------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                 PG+ G  G+PGR G +G PG+ G  G  G  G  G  G  G TGP G  G+ G 
Sbjct: 430 PGPQGYPGQKGGIGVPGRQGGEGPPGQKGEKGIAGRGGPQGPLGPVGHTGPPGPEGQKGE 489

Query: 256 NGVPGT 261
            G+PG+
Sbjct: 490 PGLPGS 495



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 80/184 (43%), Gaps = 33/184 (17%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + GF     +    G  GP G  G  G KG++G+ G  G  GAPG +            
Sbjct: 1389 GLNGFEGQKGDKGAQGQDGPPGLNGLPGLKGDLGLPGFEGAPGAPGAI------------ 1436

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG---------------YPGRIGLDGRDGLP 202
                  G+ G+ GP+G  G +G  G +G  G               +PGR G  G  G P
Sbjct: 1437 ------GEKGFTGPKGRDGRDGLHGQRGQKGEPGLLPPPGPKGEPGHPGRDGQKGEVGPP 1490

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            GE GL GI G  G  G  G  GL G+ G PG  G  GE+G+ G  G  G+ GI G PG P
Sbjct: 1491 GERGLTGIQGERGEKGERGFIGLTGQPGRPGAKGERGEQGLIGREGAIGEIGIKGEPGVP 1550

Query: 263  AICA 266
               A
Sbjct: 1551 CSSA 1554



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 89/226 (39%), Gaps = 66/226 (29%)

Query: 119 GQKGEIGAKGEM-------GVKGERGEKGAPGVVGPP-------GPQGIPGDEGKRGPKG 164
           G KGE   KGE        G +GE+GEKG P +  P        GP+G PG +G+ GP G
Sbjct: 257 GVKGE---KGESCIGISLPGQQGEKGEKGEPAIKFPSTGITSVVGPRGDPGQKGEPGPYG 313

Query: 165 DMGYPGPQGIPGDEGKRGPKG---------------------DMGYPGRIGLDGRDGLPG 203
           + G  GP G PG +G++G KG                       G  G  GL GR G PG
Sbjct: 314 EKGGLGPAGEPGHDGQKGEKGLPGGAGDRGRQGGFGPPGPSGQKGDRGETGLHGRPGQPG 373

Query: 204 EPGLDGIPGRNGMD----------------------------GIPGKDGLPGKDGIPGTN 235
           + G  G PG +G                              G+ G  GL G+DG+PG  
Sbjct: 374 QKGEAGRPGNSGERGLLGPPGPPGGGRGQPGAPGPQGPRGYPGMHGPQGLNGEDGLPGPQ 433

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
           G  G+KG  G  G +G  G  G  G   I         L P   T 
Sbjct: 434 GYPGQKGGIGVPGRQGGEGPPGQKGEKGIAGRGGPQGPLGPVGHTG 479



 Score = 42.7 bits (99), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 87/219 (39%), Gaps = 80/219 (36%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP------- 171
           G KGE G+ G  GVKGERGE G PG+ G  G  GI G++G  GP G  G PG        
Sbjct: 657 GAKGERGSAGYPGVKGERGENGQPGLPGSKGEIGIKGEKGFTGPAGTDGLPGAPGRDGFD 716

Query: 172 ----------------QGIPGDEG----------------------KRGPKGDMGYPGR- 192
                            G+ GD G                       +G KGD G PG+ 
Sbjct: 717 GRPGQSVKGEPGKAGLDGLKGDTGLTGETGQKGEAGTCAADALRVPAKGNKGDRGAPGQP 776

Query: 193 -----IGLDGRDGLPGEPGL---------------------DGIPGRNGMDGIPGKDGLP 226
                IG  G  G  GE G                       G PG  G  G PGKDGL 
Sbjct: 777 GQNGPIGQKGEIGFSGEKGFTGPQGPPGPVGPRGITGPRGEKGNPGPLGAPGNPGKDGL- 835

Query: 227 GKDGIPGTNGTNGEKG-----MTGPRGNRGKSGINGVPG 260
              G+PG NG  G+KG     + GP G +G  G++G+ G
Sbjct: 836 --RGLPGRNGERGQKGEQGISVAGPPGPQGLDGLSGLKG 872


>gi|156387626|ref|XP_001634304.1| predicted protein [Nematostella vectensis]
 gi|156221385|gb|EDO42241.1| predicted protein [Nematostella vectensis]
          Length = 1448

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 74/143 (51%), Gaps = 9/143 (6%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP---KGDM 187
           G KGE G  G  G +GP G  G PG  G  G KGD G PG  G PG  G RG    +GD 
Sbjct: 503 GQKGEAGRDGENGQIGPQGRAGAPGSPGLGGQKGDQGMPGKPGNPGAAGLRGAPGARGDY 562

Query: 188 GYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTNGEK 241
           G  G  G  GRDG PG+   PG+ GIPG  GM G PG     G  GK G PG  G  G +
Sbjct: 563 GERGEPGAPGRDGSPGQRGVPGVPGIPGLAGMQGEPGAQGPMGADGKRGAPGAQGERGPR 622

Query: 242 GMTGPRGNRGKSGINGVPGTPAI 264
           G  G +G +G +G  G  G P I
Sbjct: 623 GEQGKQGEKGHAGEGGADGAPGI 645



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 84/182 (46%), Gaps = 30/182 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G QGP G +G  G +G +G +G +G +G+ G VGP G  G+PG  G  G  G+ G  G  
Sbjct: 407 GPQGPQGAEGRTGRRGSLGERGGKGPQGSRGPVGPRGANGVPGSPGADGDTGEAGEHGAD 466

Query: 173 GIPGD------------------------------EGKRGPKGDMGYPGRIGLDGRDGLP 202
           G+ GD                              +G++G  G  G  G+IG  GR G P
Sbjct: 467 GLKGDRGADGLPGEDGIPGPRGPSGPTGPPGPDGKDGQKGEAGRDGENGQIGPQGRAGAP 526

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           G PGL G  G  GM G PG  G  G  G PG  G  GE+G  G  G  G  G  GVPG P
Sbjct: 527 GSPGLGGQKGDQGMPGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRDGSPGQRGVPGVP 586

Query: 263 AI 264
            I
Sbjct: 587 GI 588



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 80/150 (53%), Gaps = 15/150 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP G  G++G  GE G  G     GA G  GPPG +G PG  G  GPKG  G  G 
Sbjct: 175 PGTQGPRGDPGDVGEPGEAGPSGR---NGANGTAGPPGVRGQPGAIGSPGPKGQQGPQGA 231

Query: 172 QGIPGDEG---KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           +G  GD G   +RGPKG++G  G  G +G       PG  G+ G+NG DG  G  G PG 
Sbjct: 232 EGFKGDRGLIGRRGPKGNLGEKGEKGAEG-------PG--GVEGKNGTDGAAGPAGEPGA 282

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           DG  G+ G  G++G  GP G  G  G+ G 
Sbjct: 283 DGPRGSPGALGDQGERGPAGAPGPQGLPGT 312



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 95/208 (45%), Gaps = 57/208 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGDEGKRGPKGDMGYP 169
           G +G +G+KGE GA+G  GV+G+ G  GA G  G P   GP+G PG  G +G +G  G P
Sbjct: 245 GPKGNLGEKGEKGAEGPGGVEGKNGTDGAAGPAGEPGADGPRGSPGALGDQGERGPAGAP 304

Query: 170 GPQGIPGD------------------EGKRGP---------KGDMGYPGRIGLDGRDGLP 202
           GPQG+PG                   EG+ GP          GD G  G  G  G  G P
Sbjct: 305 GPQGLPGTAGPPGLPGDGGVQGDPGIEGESGPTGLAGRNGAGGDKGARGENGPAGPQGRP 364

Query: 203 GEPGLDGIPGRNGMDGIPGK------------------------DGLPGKDGIPGTNGTN 238
           G  G  G PGR+G  G PGK                         G  G +G  G  G+ 
Sbjct: 365 GAAGRQGDPGRDGAPGAPGKPVSTASNSESPDHIAKGDAGRAGPQGPQGAEGRTGRRGSL 424

Query: 239 GEKGMTGPRGNR---GKSGINGVPGTPA 263
           GE+G  GP+G+R   G  G NGVPG+P 
Sbjct: 425 GERGGKGPQGSRGPVGPRGANGVPGSPG 452



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 86/165 (52%), Gaps = 23/165 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPG-------------- 155
           GL+GP   +G+ G  G+ G +G+RGE G PG VGPPG   P+G PG              
Sbjct: 833 GLRGP---RGKPGRNGKDGSRGKRGEDGRPGAVGPPGKTGPRGKPGLQFGKELMFVCWQG 889

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D G+ G  G  G  GPQG  G +G +GP    G PG  G+ G  G PG+PG  G+ G  G
Sbjct: 890 DPGEPGRDGTPGAIGPQGPQGAQGSQGP---AGSPGTDGIPGARGTPGQPGTAGVKGNKG 946

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG  GL G  G  G  G  G++G +GP+G  G+ G  G  G
Sbjct: 947 YAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGEDGAEGAAG 991



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 72/130 (55%), Gaps = 3/130 (2%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G+ G+RG++G PG  GPPG  G PG+ G +GP+GD   PG  G PG+ G  G  G  G  
Sbjct: 149 GLPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGD---PGDVGEPGEAGPSGRNGANGTA 205

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G+ G+ G  G PG  G  G  G +G  G  GL G+ G  G  G  GEKG  GP G  
Sbjct: 206 GPPGVRGQPGAIGSPGPKGQQGPQGAEGFKGDRGLIGRRGPKGNLGEKGEKGAEGPGGVE 265

Query: 251 GKSGINGVPG 260
           GK+G +G  G
Sbjct: 266 GKNGTDGAAG 275



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 93/186 (50%), Gaps = 3/186 (1%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
            ++G   +     P G QGP G    KG+ G  G  G KG  GEKG  G  GP G +G  
Sbjct: 209 GVRGQPGAIGSPGPKGQQGPQGAEGFKGDRGLIGRRGPKGNLGEKGEKGAEGPGGVEGKN 268

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G +G  GP G+ G  GP+G PG  G +G +G  G PG  GL G  G PG PG  G+ G  
Sbjct: 269 GTDGAAGPAGEPGADGPRGSPGALGDQGERGPAGAPGPQGLPGTAGPPGLPGDGGVQGDP 328

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
           G++G  G  GL G++G  G  G  GE G  GP+G  G +G  G PG         +  S 
Sbjct: 329 GIEGESGPTGLAGRNGAGGDKGARGENGPAGPQGRPGAAGRQGDPGRDGAPGAPGKPVST 388

Query: 275 LPNSET 280
             NSE+
Sbjct: 389 ASNSES 394



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 83/192 (43%), Gaps = 45/192 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---------------------VGPPGPQ 151
           G  GP G +G  GA G  G  G  G  GAPG                       GP GPQ
Sbjct: 353 GENGPAGPQGRPGAAGRQGDPGRDGAPGAPGKPVSTASNSESPDHIAKGDAGRAGPQGPQ 412

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G  G  G+RG  G+ G  GPQG     G  GP+G  G PG  G DG  G  GE G DG+ 
Sbjct: 413 GAEGRTGRRGSLGERGGKGPQG---SRGPVGPRGANGVPGSPGADGDTGEAGEHGADGLK 469

Query: 212 GRNGMDGIPGKD---------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G DG+PG+D               G  GKDG  G  G +GE G  GP+G        
Sbjct: 470 GDRGADGLPGEDGIPGPRGPSGPTGPPGPDGKDGQKGEAGRDGENGQIGPQGR------A 523

Query: 257 GVPGTPAICAYK 268
           G PG+P +   K
Sbjct: 524 GAPGSPGLGGQK 535



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 79/161 (49%), Gaps = 18/161 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G++GE GA G  G  G+RG  G PG+ G  G QG PG +G  G  G  G PG 
Sbjct: 556 PGARGDYGERGEPGAPGRDGSPGQRGVPGVPGIPGLAGMQGEPGAQGPMGADGKRGAPGA 615

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------- 224
           QG  G  G++G +G+ G+ G  G DG  G+PGE G        G  G PG  G       
Sbjct: 616 QGERGPRGEQGKQGEKGHAGEGGADGAPGIPGEQGP------MGPVGAPGPVGNAGSPGS 669

Query: 225 -----LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                  G  G PG  G  G +G  G RG  G  GI GVPG
Sbjct: 670 PGPSGPKGDSGEPGQQGPRGTQGSDGKRGANGNPGIPGVPG 710



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 86/188 (45%), Gaps = 30/188 (15%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDE---------- 157
           P G +GP+G +G  G  G  G  G   E GE GA G+ G  G  G+PG++          
Sbjct: 432 PQGSRGPVGPRGANGVPGSPGADGDTGEAGEHGADGLKGDRGADGLPGEDGIPGPRGPSG 491

Query: 158 --------------GKRGPKGDMGYPGPQG---IPGDEGKRGPKGDMGYPGRIGLDGRDG 200
                         G+ G  G+ G  GPQG    PG  G  G KGD G PG+ G  G  G
Sbjct: 492 PTGPPGPDGKDGQKGEAGRDGENGQIGPQGRAGAPGSPGLGGQKGDQGMPGKPGNPGAAG 551

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           L G PG  G  G  G  G PG+DG PG+ G+PG  G  G  GM G  G +G  G +G  G
Sbjct: 552 LRGAPGARGDYGERGEPGAPGRDGSPGQRGVPGVPGIPGLAGMQGEPGAQGPMGADGKRG 611

Query: 261 TPAICAYK 268
            P     +
Sbjct: 612 APGAQGER 619



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 79/152 (51%), Gaps = 8/152 (5%)

Query: 111  PPGLQGPIGQKGEIGAKGEM-----GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
            PPG  GP G+ G    K  M     G  GE G  G PG +GP GPQG  G +G  G  G 
Sbjct: 864  PPGKTGPRGKPGLQFGKELMFVCWQGDPGEPGRDGTPGAIGPQGPQGAQGSQGPAGSPGT 923

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
             G PG +G PG  G  G KG+ GY   PG +GL+G  G  G  G  G  GR+G  G  G+
Sbjct: 924  DGIPGARGTPGQPGTAGVKGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGE 983

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            DG  G  G+ G +G  G +G  G +G +GK G
Sbjct: 984  DGAEGAAGLVGDSGEKGYRGAPGRQGLQGKRG 1015



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/134 (42%), Positives = 67/134 (50%), Gaps = 17/134 (12%)

Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
           VG PGP G+PG +G  GP GD G  G +G PG  G  G +G  G PGR G DG  G  GE
Sbjct: 796 VGRPGPVGLPGPQGPAGPDGDHGMDGAKGDPGAAGVNGLRGPRGKPGRNGKDGSRGKRGE 855

Query: 205 ---PGLDGIPGRNGMDGIP--------------GKDGLPGKDGIPGTNGTNGEKGMTGPR 247
              PG  G PG+ G  G P              G  G PG+DG PG  G  G +G  G +
Sbjct: 856 DGRPGAVGPPGKTGPRGKPGLQFGKELMFVCWQGDPGEPGRDGTPGAIGPQGPQGAQGSQ 915

Query: 248 GNRGKSGINGVPGT 261
           G  G  G +G+PG 
Sbjct: 916 GPAGSPGTDGIPGA 929



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 81/179 (45%), Gaps = 30/179 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G  G IG +G  G +G +G  G+PG  G PG +G PG  G  G KG+ GY G 
Sbjct: 891  PGEPGRDGTPGAIGPQGPQGAQGSQGPAGSPGTDGIPGARGTPGQPGTAGVKGNKGYAGN 950

Query: 172  ------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                  +G+ G  G +GP GD G  G  G  G DG  G  GL G  G  G  G PG+ GL
Sbjct: 951  PGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGEDGAEGAAGLVGDSGEKGYRGAPGRQGL 1010

Query: 226  PGKDGI------------PGTNGT------------NGEKGMTGPRGNRGKSGINGVPG 260
             GK G              G  G             NG +G  GP+G+ G+ G  G PG
Sbjct: 1011 QGKRGPEGDPGSPGGSGEAGDKGVDGPPGSPGPQGFNGARGPNGPKGDSGRPGPRGFPG 1069



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 72/153 (47%), Gaps = 38/153 (24%)

Query: 140 GAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYP------GPQGIPGDEGK---RGPKGDM 187
           G PG VG PGPQ   G  GD G  G KGD G        GP+G PG  GK   RG +G+ 
Sbjct: 797 GRPGPVGLPGPQGPAGPDGDHGMDGAKGDPGAAGVNGLRGPRGKPGRNGKDGSRGKRGED 856

Query: 188 GYPGRIGLDGR--------------------DGLPGEPGLDGIPGR------NGMDGIPG 221
           G PG +G  G+                     G PGEPG DG PG        G  G  G
Sbjct: 857 GRPGAVGPPGKTGPRGKPGLQFGKELMFVCWQGDPGEPGRDGTPGAIGPQGPQGAQGSQG 916

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G PG DGIPG  GT G+ G  G +GN+G +G
Sbjct: 917 PAGSPGTDGIPGARGTPGQPGTAGVKGNKGYAG 949



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/134 (42%), Positives = 72/134 (53%), Gaps = 15/134 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ G  G +GE GA+G MG  G+RG   APG  G  GP+G  G +G++G  G+ G  G 
Sbjct: 586 PGIPGLAGMQGEPGAQGPMGADGKRG---APGAQGERGPRGEQGKQGEKGHAGEGGADGA 642

Query: 172 QGIPGDEGKRGPKGDMGYPGRIG---------LDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            GIPG++G  GP   +G PG +G           G  G  GEPG  G  G  G DG  G 
Sbjct: 643 PGIPGEQGPMGP---VGAPGPVGNAGSPGSPGPSGPKGDSGEPGQQGPRGTQGSDGKRGA 699

Query: 223 DGLPGKDGIPGTNG 236
           +G PG  G+PG  G
Sbjct: 700 NGNPGIPGVPGDAG 713



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 70/133 (52%), Gaps = 27/133 (20%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIG---QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG 152
           L  MQG          PG QGP+G   ++G  GA+GE G +GE+G++G  G  G  G  G
Sbjct: 591 LAGMQGE---------PGAQGPMGADGKRGAPGAQGERGPRGEQGKQGEKGHAGEGGADG 641

Query: 153 IPGDEGKRGPKGDMGYPGP---------------QGIPGDEGKRGPKGDMGYPGRIGLDG 197
            PG  G++GP G +G PGP               +G  G+ G++GP+G  G  G+ G +G
Sbjct: 642 APGIPGEQGPMGPVGAPGPVGNAGSPGSPGPSGPKGDSGEPGQQGPRGTQGSDGKRGANG 701

Query: 198 RDGLPGEPGLDGI 210
             G+PG PG  G+
Sbjct: 702 NPGIPGVPGDAGL 714



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 49/101 (48%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
            QG   S      PG +G  GQ G  G KG  G  G  G  G  G+ G  G QG  GD G+
Sbjct: 915  QGPAGSPGTDGIPGARGTPGQPGTAGVKGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGR 974

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
             GPKG  G  G +G  G  G  G KG  G PGR GL G+ G
Sbjct: 975  SGPKGAAGEDGAEGAAGLVGDSGEKGYRGAPGRQGLQGKRG 1015


>gi|315306681|gb|ADU04085.1| collagen-like protein [Pasteuria ramosa]
          Length = 637

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 91/167 (54%), Gaps = 9/167 (5%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG         PPG QG  G  G  G KG+ G  G +G +G  G+ GPPG QG PG  G 
Sbjct: 123 QGRQGEAGLPGPPGKQGEPGLSGPKGEKGDPGEPGPQGRQGEAGLPGPPGKQGEPGLSGS 182

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLP------GEPGLDGI 210
           +G KGD G  GPQG  G+ G  GPKGD    G PG  G  G  G+P      GE G+ G 
Sbjct: 183 KGEKGDPGESGPQGRQGEAGLPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGMPGP 242

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G+PG  G  G+ GIPG  G  GE GM GP+G++G++G+ G
Sbjct: 243 KGDQGEAGMPGPKGDQGEAGIPGPKGDQGEAGMPGPKGDQGEAGMPG 289



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 91/163 (55%), Gaps = 9/163 (5%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
           G      E   PG  GP G++GE G       +GE G+ G +GEKG PG  GP G QG  
Sbjct: 142 GLSGPKGEKGDPGEPGPQGRQGEAGLPGPPGKQGEPGLSGSKGEKGDPGESGPQGRQGEA 201

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G  G +G +G+ G PGP+G  G+ G  GPKGD G     G+ G  G  GE G+ G  G  
Sbjct: 202 GLPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQG---EAGMPGPKGDQGEAGMPGPKGDQ 258

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G  GIPG  G  G+ G+PG  G  GE GM GP+G++G++GI G
Sbjct: 259 GEAGIPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGIPG 301



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 92/170 (54%), Gaps = 12/170 (7%)

Query: 120 QKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG 176
           +KG+IG  G  G  GE   +G +G  G+ GPPG QG PG  G +G KGD G PGPQG  G
Sbjct: 104 KKGDIGIPGPQGYPGEPGPQGRQGEAGLPGPPGKQGEPGLSGPKGEKGDPGEPGPQGRQG 163

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
           + G  GP G  G PG   L G  G  G+PG  G  GR G  G+PG  G  G+ G+PG  G
Sbjct: 164 EAGLPGPPGKQGEPG---LSGSKGEKGDPGESGPQGRQGEAGLPGPKGDQGEAGMPGPKG 220

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
             GE GM GP+G++G++G+      P     + E+    P  +  +  IP
Sbjct: 221 DQGEAGMPGPKGDQGEAGM------PGPKGDQGEAGMPGPKGDQGEAGIP 264



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/190 (40%), Positives = 101/190 (53%), Gaps = 15/190 (7%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG  G+ G  G +GE G+ G  G++G PG+ GP G +G PG+ G +G +G+ G PGP
Sbjct: 111 PGPQGYPGEPGPQGRQGEAGLPGPPGKQGEPGLSGPKGEKGDPGEPGPQGRQGEAGLPGP 170

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIPGK 222
              QG PG  G +G KGD G  G  G  G  GLP      GE G+ G  G  G  G+PG 
Sbjct: 171 PGKQGEPGLSGSKGEKGDPGESGPQGRQGEAGLPGPKGDQGEAGMPGPKGDQGEAGMPGP 230

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI------NGVPGTPAICAYKRESCSLLP 276
            G  G+ G+PG  G  GE GM GP+G++G++GI       G  G P     + E+    P
Sbjct: 231 KGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGIPGPKGDQGEAGMPGPKGDQGEAGMPGP 290

Query: 277 NSETSQLLIP 286
             +  +  IP
Sbjct: 291 KGDQGEAGIP 300



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 103/207 (49%), Gaps = 21/207 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
           G   S  E   PG  GP G++GE G    KG+ G  G  G KG  G  G PGP+G  G+ 
Sbjct: 178 GLSGSKGEKGDPGESGPQGRQGEAGLPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEA 237

Query: 158 GKRGPKGDMG---YPGPQGIPGDEGKRGPKGDM---GYPGRIGLDGRDGLP------GEP 205
           G  GPKGD G    PGP+G  G+ G  GPKGD    G PG  G  G  G+P      GE 
Sbjct: 238 GMPGPKGDQGEAGMPGPKGDQGEAGIPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEA 297

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI------NGVP 259
           G+ G  G  G  G+PG  G  G+ G+PG  G  GE GM GP+G++G++GI       G  
Sbjct: 298 GIPGPKGDQGEAGMPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGIPGSKGDQGEA 357

Query: 260 GTPAICAYKRESCSLLPNSETSQLLIP 286
           G P     + E+    P  +  +  IP
Sbjct: 358 GIPGPKGDQGEAGIPGPKGDQGEAGIP 384



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 99/186 (53%), Gaps = 15/186 (8%)

Query: 113 GLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G+ GP G +GE G       +GE G+ G +G++G  G+ GP G QG  G  G +G +G+ 
Sbjct: 226 GMPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGIPGPKGDQGEAGMPGPKGDQGEA 285

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PGP+G  G+ G  GPKGD G  G  GL G  G  G PGL G  G  GM   PG  G  
Sbjct: 286 GMPGPKGDQGEAGIPGPKGDQGEAGMPGLKGDQGEAGMPGLKGDQGEAGM---PGPKGDQ 342

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI------NGVPGTPAICAYKRESCSLLPNSET 280
           G+ GIPG+ G  GE G+ GP+G++G++GI       G  G P     + E+    P  + 
Sbjct: 343 GEAGIPGSKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQ 402

Query: 281 SQLLIP 286
            +  IP
Sbjct: 403 GEAGIP 408



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 99/195 (50%), Gaps = 24/195 (12%)

Query: 97  VAMQGFCNSTKEYCPPGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------ 147
             M G      E   PGL   QG  G  G  G +GE G+ G +G++G  G+ GP      
Sbjct: 309 AGMPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGIPGSKGDQGEAGIPGPKGDQGE 368

Query: 148 ---PGPQGIPGDEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMG---YPGRIGLDGR 198
              PGP+G  G+ G  GPKGD G    PGP+G  G+ G  GPKGD G    PG  G  G 
Sbjct: 369 AGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGMPGPKGDQGE 428

Query: 199 DGLPG------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G+PG      E G+ G+ G  G  G+PG  G  G+ G+PG  G  GE GM GP+G++G+
Sbjct: 429 AGIPGPKGDQGEAGMPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGMPGPKGDQGE 488

Query: 253 SGINGVPGTPAICAY 267
           +G+ G  G P     
Sbjct: 489 AGMPGPKGDPGEAGM 503



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 100/199 (50%), Gaps = 21/199 (10%)

Query: 100 QGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           QG         PPG QG     G KGE G  GE G +G +GE G       PGP+G  G+
Sbjct: 159 QGRQGEAGLPGPPGKQGEPGLSGSKGEKGDPGESGPQGRQGEAGL------PGPKGDQGE 212

Query: 157 EGKRGPKGDM---GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  GPKGD    G PGP+G  G+ G  GPKGD    G  G+ G  G  GE G+ G  G 
Sbjct: 213 AGMPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQ---GEAGMPGPKGDQGEAGIPGPKGD 269

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV------PGTPAICAY 267
            G  G+PG  G  G+ G+PG  G  GE G+ GP+G++G++G+ G+       G P +   
Sbjct: 270 QGEAGMPGPKGDQGEAGMPGPKGDQGEAGIPGPKGDQGEAGMPGLKGDQGEAGMPGLKGD 329

Query: 268 KRESCSLLPNSETSQLLIP 286
           + E+    P  +  +  IP
Sbjct: 330 QGEAGMPGPKGDQGEAGIP 348



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 15/166 (9%)

Query: 113 GLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G+ GP G +GE G       +GE G+ G +G++G  G+ GP G QG  G  G +G +G+ 
Sbjct: 358 GIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEA 417

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG-------- 218
           G PGP+G  G+ G  GPKGD G  G  GL G  G  G PGL G  G  GM G        
Sbjct: 418 GMPGPKGDQGEAGIPGPKGDQGEAGMPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEA 477

Query: 219 -IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            +PG  G  G+ G+PG  G  GE GM GP+G+RG  G  G  G+P 
Sbjct: 478 GMPGPKGDQGEAGMPGPKGDPGEAGMPGPKGDRGFVGPRGEVGSPG 523



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 15/186 (8%)

Query: 113 GLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G+ GP G +GE G       +GE G+ G +G++G  G+ GP G QG  G  G +G +G+ 
Sbjct: 298 GIPGPKGDQGEAGMPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGIPGSKGDQGEA 357

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PGP+G  G+ G  GPKGD    G  G+ G  G  GE G+ G  G  G  GIPG  G  
Sbjct: 358 GIPGPKGDQGEAGIPGPKGDQ---GEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQ 414

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV------PGTPAICAYKRESCSLLPNSET 280
           G+ G+PG  G  GE G+ GP+G++G++G+ G+       G P +   + E+    P  + 
Sbjct: 415 GEAGMPGPKGDQGEAGIPGPKGDQGEAGMPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQ 474

Query: 281 SQLLIP 286
            +  +P
Sbjct: 475 GEAGMP 480



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 102/201 (50%), Gaps = 33/201 (16%)

Query: 113 GLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDE 157
           G+ GP G +GE G       +GE G+ G +G++G  G+ GP         PGP+G  G+ 
Sbjct: 238 GMPGPKGDQGEAGMPGPKGDQGEAGIPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEA 297

Query: 158 GKRGPKGDMGYPGPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPG------EP 205
           G  GPKGD G  G  G+ GD+G+      +G +G+ G PG  G  G  G+PG      E 
Sbjct: 298 GIPGPKGDQGEAGMPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGIPGSKGDQGEA 357

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
           G+ G  G  G  GIPG  G  G+ GIPG  G  GE G+ GP+G++G++GI      P   
Sbjct: 358 GIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGI------PGPK 411

Query: 266 AYKRESCSLLPNSETSQLLIP 286
             + E+    P  +  +  IP
Sbjct: 412 GDQGEAGMPGPKGDQGEAGIP 432



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 88/167 (52%), Gaps = 21/167 (12%)

Query: 113 GLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGP---------PGPQGIPGDE 157
           G+ GP G +GE G       +GE G+ G +G++G  G+ GP         PGP+G  G+ 
Sbjct: 370 GIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGIPGPKGDQGEAGMPGPKGDQGEA 429

Query: 158 GKRGPKGDMGYPGPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G  GPKGD G  G  G+ GD+G+      +G +G+ G PG  G  G  G+PG  G  G  
Sbjct: 430 GIPGPKGDQGEAGMPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEA 489

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G  G PG+ G+PG  G  G  G  GE G  GPRG+RG  G+ G 
Sbjct: 490 GMPGPKGDPGEAGMPGPKGDRGFVGPRGEVGSPGPRGDRGLVGLRGA 536



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 85/158 (53%), Gaps = 6/158 (3%)

Query: 113 GLQGPIGQKGEIGA------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           G+ GP G +GE G       +GE G+ G +G++G  G+ GP G QG  G  G +G +G+ 
Sbjct: 394 GIPGPKGDQGEAGIPGPKGDQGEAGMPGPKGDQGEAGIPGPKGDQGEAGMPGLKGDQGEA 453

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G PG +G  G+ G  GPKGD G  G  G  G  G  G PG  G PG  GM G  G  G  
Sbjct: 454 GMPGLKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDPGEAGMPGPKGDRGFV 513

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G  G+ G  G++G+ G RG +G  G  G+PG P +
Sbjct: 514 GPRGEVGSPGPRGDRGLVGLRGAQGDIGKRGLPGVPGL 551



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 74/132 (56%), Gaps = 18/132 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGDM 166
           G+ GP G +GE G  G   +KG++GE G PG+       G PGP+G  G+ G  GPKGD 
Sbjct: 430 GIPGPKGDQGEAGMPG---LKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGMPGPKGDQ 486

Query: 167 G---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G    PGP+G PG+ G  GPKGD G+   +G  G  G PG  G  G+ G  G  G  GK 
Sbjct: 487 GEAGMPGPKGDPGEAGMPGPKGDRGF---VGPRGEVGSPGPRGDRGLVGLRGAQGDIGKR 543

Query: 224 GLPGKDGIPGTN 235
           GLP   G+PG N
Sbjct: 544 GLP---GVPGLN 552



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 62/112 (55%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
             M G      E   PGL+G  G+ G  G KG+ G  G  G KG  G  G PGP+G PG+
Sbjct: 441 AGMPGLKGDQGEAGMPGLKGDQGEAGMPGPKGDQGEAGMPGPKGDQGEAGMPGPKGDPGE 500

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  GPKGD G+ GP+G  G  G RG +G +G  G  G  G+ GLPG PGL+
Sbjct: 501 AGMPGPKGDRGFVGPRGEVGSPGPRGDRGLVGLRGAQGDIGKRGLPGVPGLN 552


>gi|402867395|ref|XP_003897838.1| PREDICTED: collagen alpha-1(XIX) chain [Papio anubis]
          Length = 1142

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 92/200 (46%), Gaps = 58/200 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  GP GQKGE    GE   KGE+G++G PG++G                       G 
Sbjct: 470 PGSVGPKGQKGE---PGEPFTKGEKGDRGEPGIIGSQGVKGEPGDPGPPGLIGSPGLKGQ 526

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK----------------GDMGYPGRIG 194
           QG  G  G RGP GD+G PG  GIPG +G +G K                G+ G PG+  
Sbjct: 527 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKS- 585

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGM 243
                 LPGEPGLDG PG  G  G  G+ GLPG             GIPG  G+ G  G 
Sbjct: 586 ------LPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPPGVGIPGRTGSQGPVGE 639

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            G +G RG  G+ G PGTP 
Sbjct: 640 PGIQGPRGLPGLPGTPGTPG 659



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 95/239 (39%), Gaps = 80/239 (33%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGD--- 165
           PGL G  G++G  G+KGE G KGE+GEKG PG+ G  G  G+ GD G RG   PKG+   
Sbjct: 321 PGLPGQKGEQGFEGSKGETGEKGEQGEKGDPGLAGLNGENGLKGDLGPRGLPGPKGEKGD 380

Query: 166 ------------MGYPGPQGIPGDEGKRGP------------------------------ 183
                       +G  GPQG PG EG+RG                               
Sbjct: 381 TGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLGG 440

Query: 184 -----------------KGDMG------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                            KGD G      +PG +G  G+ G PGEP   G  G  G  GI 
Sbjct: 441 YYNKDNKGNDEHEAGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGII 500

Query: 221 GKDGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G+ G+          G PG  G  G  G  GPRG  G  G+ G  G P     K E
Sbjct: 501 GSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGE 559



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 82/197 (41%), Gaps = 64/197 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  G +G KG+ G  GE   KGE+G++G PG++G                       G 
Sbjct: 467 PGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGIIGSQGVKGEPGDPGPPGLIGSPGLKGQ 526

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK-------------------------- 184
           QG  G  G RGP GD+G PG  GIPG +G +G K                          
Sbjct: 527 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKSL 586

Query: 185 -------GDMGYPGRIGLDGRDGLPG---------EPGLDGIPGRNGMDGIPGKDGLPGK 228
                  G+ G PG  G  G  GLPG          PG+ GIPGR G  G  G+ G+ G 
Sbjct: 587 PGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPPGV-GIPGRTGSQGPVGEPGIQGP 645

Query: 229 DGIPGTNGTNGEKGMTG 245
            G+PG  GT G  G  G
Sbjct: 646 RGLPGLPGTPGTPGNDG 662



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 68/147 (46%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG----------------EK 139
           L   QG   S     PPG    +G  GE G  G+ G+KGE+G                E 
Sbjct: 523 LKGQQGSAGSMGPRGPPG---DVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEA 579

Query: 140 GAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD-----------EGKRGPKGD 186
           G PG  + G PG  G PG  G RGPKG+ G PG  G PGD            G +GP G+
Sbjct: 580 GPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPPGVGIPGRTGSQGPVGE 639

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG+PGR
Sbjct: 640 PGIQGPRGLPGLPGTPGTPGNDGVPGR 666



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 69/145 (47%), Gaps = 24/145 (16%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPG---------------DEGKRGPKGDMGYPGPQ 172
           G MG+ G  G  G  G  GP GP GI G               + G+RGP GD+G+PGP+
Sbjct: 860 GAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGPE 919

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                    GP G  G  G+ G+ G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 920 ---------GPSGKPGINGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGERGKP 970

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G  GP GN+G  G  G
Sbjct: 971 GLTGMKGAIGPIGPPGNKGSMGSPG 995



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 50/95 (52%), Gaps = 6/95 (6%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G+PG    PG  G+   KGD G PG  GL G  GLPG+ G  G  G  G  G  G+
Sbjct: 291 KGEAGFPG---APGSPGQ---KGDKGEPGENGLHGAPGLPGQKGEQGFEGSKGETGEKGE 344

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G+ G NG NG KG  GPRG  G  G  G
Sbjct: 345 QGEKGDPGLAGLNGENGLKGDLGPRGLPGPKGEKG 379



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 78/168 (46%), Gaps = 33/168 (19%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A G  G KGE G  G PG VGP G +G PG+   +G KGD G PG  G  G +G+ G  G
Sbjct: 454 AGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGIIGSQGVKGEPGDPG 513

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI-------------- 231
             G  G  GL G+ G  G  G  G PG  G+   PG+ G+PGK GI              
Sbjct: 514 PPGLIGSPGLKGQQGSAGSMGPRGPPGDVGL---PGEHGIPGKQGIKGEKGDPGGIIGPP 570

Query: 232 ----------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                           PG  G +G  G  GPRG +G+ G+ GV G+P 
Sbjct: 571 GLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPG 618



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 65/125 (52%), Gaps = 24/125 (19%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KGE G  G  G  G++G+KG PG  G  G  G+PG       KG+ G+ G +G  G++G+
Sbjct: 291 KGEAGFPGAPGSPGQKGDKGEPGENGLHGAPGLPGQ------KGEQGFEGSKGETGEKGE 344

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---------------GIPGKDGL 225
           +G KGD   PG  GL+G +GL G+ G  G+PG  G                 GI G  G 
Sbjct: 345 QGEKGD---PGLAGLNGENGLKGDLGPRGLPGPKGEKGDTGPPGPPALPGSLGIQGPQGP 401

Query: 226 PGKDG 230
           PGK+G
Sbjct: 402 PGKEG 406



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G PG PG    PG+ G  G PG++GL G  G+PG     GE+G  G +G  G+ G  
Sbjct: 292 GEAGFPGAPG---SPGQKGDKGEPGENGLHGAPGLPGQ---KGEQGFEGSKGETGEKGEQ 345

Query: 257 GVPGTPAICAYKRES 271
           G  G P +     E+
Sbjct: 346 GEKGDPGLAGLNGEN 360



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G++G+ G  G+ G +GERG+ G  G+ G  GP G PG+      KG MG PG 
Sbjct: 943 PGDRGPKGERGDQGIPGDRGPQGERGKPGLTGMKGAIGPIGPPGN------KGSMGSPGH 996

Query: 172 Q 172
           Q
Sbjct: 997 Q 997


>gi|358413698|ref|XP_002705145.2| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(XIX) chain,
           partial [Bos taurus]
          Length = 1251

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 94/217 (43%), Gaps = 67/217 (30%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------- 143
           G      E   PG  G IG KGE G  GE   KGE+G++G PG                 
Sbjct: 633 GLKGEKGETGSPGFPGSIGPKGEKGESGERFTKGEKGDRGEPGITGSQGIKGEPGDPGPP 692

Query: 144 -VVGPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG-------------- 185
            V+G PG    QG  G  G RGP GD+G PG  GIPG   K+G KG              
Sbjct: 693 GVIGSPGLKGQQGPAGSVGPRGPPGDIGLPGEHGIPG---KQGNKGEKGDPGGITGPPGL 749

Query: 186 -----DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP-------- 232
                + G PG+        LPGEPGLDG PG  G  G  G+ GLPG  G P        
Sbjct: 750 PGPKGEAGPPGKS-------LPGEPGLDGSPGAPGPRGPKGERGLPGVQGSPGDIGPPGI 802

Query: 233 ------GTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                 G+ G  GE G+ GP   RG  G+ G PGTP 
Sbjct: 803 GIPGRTGSQGPAGEPGIQGP---RGLPGLPGTPGTPG 836



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 84/190 (44%), Gaps = 45/190 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
           GL+G  G  G+ G +G  G KGE GEKG PG  G PG  G+ G +G +G           
Sbjct: 495 GLRGTPGLPGQKGEQGFEGSKGETGEKGEPGEKGDPGLSGVNGQDGVKGDSGPRGPPGPK 554

Query: 162 -PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG-------------------------- 194
             KGDMG PGP  + G  G +GP+G  G  G+ G                          
Sbjct: 555 GDKGDMGPPGPPTLTGSLGIQGPQGPPGKEGQRGRRGKPGPPGKPGPPGPPGPPGVQGMQ 614

Query: 195 --LDG--RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
             LDG    G  GE G  G+ G  G  G P   G PG  G  G  G +GE+   G +G+R
Sbjct: 615 QTLDGYYHKGNVGEHGAGGLKGEKGETGSP---GFPGSIGPKGEKGESGERFTKGEKGDR 671

Query: 251 GKSGINGVPG 260
           G+ GI G  G
Sbjct: 672 GEPGITGSQG 681



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/138 (40%), Positives = 64/138 (46%), Gaps = 35/138 (25%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERG----------------------EKGAPG--VVG 146
           P G  GP G  G+IG  GE G+ G++G                      E G PG  + G
Sbjct: 706 PAGSVGPRGPPGDIGLPGEHGIPGKQGNKGEKGDPGGITGPPGLPGPKGEAGPPGKSLPG 765

Query: 147 PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE-----------GKRGPKGDMGYPGRIGL 195
            PG  G PG  G RGPKG+ G PG QG PGD            G +GP G+ G  G  GL
Sbjct: 766 EPGLDGSPGAPGPRGPKGERGLPGVQGSPGDIGPPGIGIPGRTGSQGPAGEPGIQGPRGL 825

Query: 196 DGRDGLPGEPGLDGIPGR 213
            G  G PG PG DG PGR
Sbjct: 826 PGLPGTPGTPGNDGAPGR 843



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 89/237 (37%), Gaps = 78/237 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------------EGK 159
           PGL G  G++G  G+KGE G KGE GEKG PG+ G  G  G+ GD            +G 
Sbjct: 500 PGLPGQKGEQGFEGSKGETGEKGEPGEKGDPGLSGVNGQDGVKGDSGPRGPPGPKGDKGD 559

Query: 160 RGP------KGDMGYPGPQGIPGDEGK--------------------------------- 180
            GP       G +G  GPQG PG EG+                                 
Sbjct: 560 MGPPGPPTLTGSLGIQGPQGPPGKEGQRGRRGKPGPPGKPGPPGPPGPPGVQGMQQTLDG 619

Query: 181 ---------------RGPKGDM---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
                          +G KG+    G+PG IG  G  G  GE    G  G  G  GI G 
Sbjct: 620 YYHKGNVGEHGAGGLKGEKGETGSPGFPGSIGPKGEKGESGERFTKGEKGDRGEPGITGS 679

Query: 223 DGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G+ G+          G PG  G  G  G  GPRG  G  G+ G  G P     K E
Sbjct: 680 QGIKGEPGDPGPPGVIGSPGLKGQQGPAGSVGPRGPPGDIGLPGEHGIPGKQGNKGE 736



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 76/145 (52%), Gaps = 15/145 (10%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGA------PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  G  G +G  GVKG+RG  G        G  G PGP GIPG+ G+RGP GD+G+PGP+
Sbjct: 1037 GAMGLXGLEGFPGVKGDRGPAGPPGAAGISGKPGAPGPPGIPGEPGERGPVGDIGFPGPE 1096

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                     GP G  G  G+ GL G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 1097 ---------GPSGKPGINGKDGLPGVQGIMGKPGERGPKGERGDQGIPGDRGPQGEQGKP 1147

Query: 233  GTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G  G  GP GN+G  G  G
Sbjct: 1148 GLQGIKGAIGPVGPPGNKGSPGSPG 1172



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 88/207 (42%), Gaps = 31/207 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G KGE G  GE G +G PG+ G  G QG  G +G+ G KG+ G  G  G+ G  
Sbjct: 477 GEAGSPGQKGEQGRPGENGLRGTPGLPGQKGEQGFEGSKGETGEKGEPGEKGDPGLSGVN 536

Query: 179 GKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK------- 228
           G+ G KGD G  G  G     G  G PG P L G  G  G  G PGK+G  G+       
Sbjct: 537 GQDGVKGDSGPRGPPGPKGDKGDMGPPGPPTLTGSLGIQGPQGPPGKEGQRGRRGKPGPP 596

Query: 229 --------------DGIPGT------NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                          G+  T       G  GE G  G +G +G++G  G PG+      K
Sbjct: 597 GKPGPPGPPGPPGVQGMQQTLDGYYHKGNVGEHGAGGLKGEKGETGSPGFPGSIGPKGEK 656

Query: 269 RESCSLLPNSETSQLLIPPTIVGSEHI 295
            ES       E       P I GS+ I
Sbjct: 657 GESGERFTKGEKGD-RGEPGITGSQGI 682



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 9/86 (10%)

Query: 112  PGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG +GP G+    G+ G  G  G+ G+ GE+G  G     G QGIPGD   RGP+G+ G 
Sbjct: 1093 PGPEGPSGKPGINGKDGLPGVQGIMGKPGERGPKGER---GDQGIPGD---RGPQGEQGK 1146

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIG 194
            PG QGI G  G  GP G+ G PG  G
Sbjct: 1147 PGLQGIKGAIGPVGPPGNKGSPGSPG 1172



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 92/255 (36%), Gaps = 96/255 (37%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------GPQGIPGDEGK--- 159
           PGL G  GQ G  G  G  G  G +G+KG  G  GPP         GPQG PG EG+   
Sbjct: 530 PGLSGVNGQDGVKGDSGPRGPPGPKGDKGDMGPPGPPTLTGSLGIQGPQGPPGKEGQRGR 589

Query: 160 ---------------------------------------------RGPKGDMGYP----- 169
                                                        +G KG+ G P     
Sbjct: 590 RGKPGPPGKPGPPGPPGPPGVQGMQQTLDGYYHKGNVGEHGAGGLKGEKGETGSPGFPGS 649

Query: 170 -GPQGIPGDEGKR---GPKGDMGYPGRIGLDGRD------------GLPGEPGLDGIPGR 213
            GP+G  G+ G+R   G KGD G PG  G  G              G PG  G  G  G 
Sbjct: 650 IGPKGEKGESGERFTKGEKGDRGEPGITGSQGIKGEPGDPGPPGVIGSPGLKGQQGPAGS 709

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGM----------------TGPRGNR--GKSGI 255
            G  G PG  GLPG+ GIPG  G  GEKG                  GP G    G+ G+
Sbjct: 710 VGPRGPPGDIGLPGEHGIPGKQGNKGEKGDPGGITGPPGLPGPKGEAGPPGKSLPGEPGL 769

Query: 256 NGVPGTPAICAYKRE 270
           +G PG P     K E
Sbjct: 770 DGSPGAPGPRGPKGE 784


>gi|403310249|emb|CCJ09599.1| Nacrein-like 2 protein [Patella vulgata]
          Length = 1324

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 92/172 (53%), Gaps = 12/172 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G +GE GA GE G+ GERGE+G PG +G PG +G PG+ G  GP G++G PGP
Sbjct: 534 PGESGNPGPQGESGAAGEPGIPGERGEQGFPGEIGQPGNRGAPGERGNSGPSGEIGMPGP 593

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G+ GD G  G  G +G PG  G +GR G  G  G  G  GR+G  G PG+ G+ G  GI
Sbjct: 594 PGLSGDRGDPGQAGLIGLPGERGPEGRAGPRGLTGNVGERGRDGEPGPPGETGVAGPPGI 653

Query: 232 PGTNGTNGEKGMTGPR------------GNRGKSGINGVPGTPAICAYKRES 271
            G +G    KG  GP             G RG +G+ G  G P +     E+
Sbjct: 654 MGPSGIAAGKGDRGPSGPAGEPGPPGNVGQRGVAGLQGAQGPPGLSGSPGET 705



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 93/192 (48%), Gaps = 45/192 (23%)

Query: 111 PPGLQGPIGQKGEIGAKGE---------MGVKGER------------------GEKGAPG 143
           PPGLQGP G KGE GA+G           G +GER                  GE+G  G
Sbjct: 458 PPGLQGPSGNKGETGAEGRSGDQGRPGPQGTRGERGPAGEPGPPGANGAPGQTGERGESG 517

Query: 144 VVGP------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
            +GP      PG  G PG+ G  GP+G+ G  G  GIPG+      +G+ G+PG IG  G
Sbjct: 518 AIGPTGFQGLPGADGAPGESGNPGPQGESGAAGEPGIPGE------RGEQGFPGEIGQPG 571

Query: 198 RDGLPGEPGLDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRG 251
             G PGE G  G  G  GM G P   G  G PG+ G+ G  G  G +G  GPR   GN G
Sbjct: 572 NRGAPGERGNSGPSGEIGMPGPPGLSGDRGDPGQAGLIGLPGERGPEGRAGPRGLTGNVG 631

Query: 252 KSGINGVPGTPA 263
           + G +G PG P 
Sbjct: 632 ERGRDGEPGPPG 643



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 84/175 (48%), Gaps = 18/175 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL G  G +G  G+ G  G  GE+G +G  G  G  GP G  G+ G  G  GD G PGP
Sbjct: 426 PGLDGATGDRGPAGSNGLDGAPGEQGPQGNAGPPGLQGPSGNKGETGAEGRSGDQGRPGP 485

Query: 172 QG------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           QG                   PG  G+RG  G +G  G  GL G DG PGE G  G  G 
Sbjct: 486 QGTRGERGPAGEPGPPGANGAPGQTGERGESGAIGPTGFQGLPGADGAPGESGNPGPQGE 545

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           +G  G PG  G  G+ G PG  G  G +G  G RGN G SG  G+PG P +   +
Sbjct: 546 SGAAGEPGIPGERGEQGFPGEIGQPGNRGAPGERGNSGPSGEIGMPGPPGLSGDR 600



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 86/198 (43%), Gaps = 39/198 (19%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           V  +G         PPGL G  G+ G  G  G  GVKG+ G +G PG VG  G QG  G 
Sbjct: 681 VGQRGVAGLQGAQGPPGLSGSPGETGPSGEPGSPGVKGDNGARGFPGEVGAMGEQGAEGV 740

Query: 157 EGKRGPKGDMGYPG------------------------PQGIPGDEGKRGPKGDMGYPGR 192
            G++G +G+ G PG                        P G  G +G+RG +G++G PGR
Sbjct: 741 AGRKGSRGEGGTPGTAGQPGQPGRIGPPGPPGAQGSLGPAGAVGQQGERGERGEVGPPGR 800

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G  G PG            +DG PG+ G  G+ G PG  G  G +G    RGN G 
Sbjct: 801 NGEAGAVGAPG------------LDGAPGERGSTGQVGPPGQAGATGPQGE---RGNPGA 845

Query: 253 SGINGVPGTPAICAYKRE 270
            G  G PG   +     E
Sbjct: 846 PGFQGEPGPQGLAGANGE 863



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 88/198 (44%), Gaps = 27/198 (13%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG   +  E   PG +G  G  GEIG  G  G  GERG  G  G +G PGP G+ GD G 
Sbjct: 543 QGESGAAGEPGIPGERGEQGFPGEIGQPGNRGAPGERGNSGPSGEIGMPGPPGLSGDRGD 602

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G  G +G PG +G    EG+ GP+G  G  G  G DG  G PGE G+ G PG  G  GI
Sbjct: 603 PGQAGLIGLPGERGP---EGRAGPRGLTGNVGERGRDGEPGPPGETGVAGPPGIMGPSGI 659

Query: 220 P------------------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                                    G  GL G  G PG +G+ GE G +G  G+ G  G 
Sbjct: 660 AAGKGDRGPSGPAGEPGPPGNVGQRGVAGLQGAQGPPGLSGSPGETGPSGEPGSPGVKGD 719

Query: 256 NGVPGTPAICAYKRESCS 273
           NG  G P       E  +
Sbjct: 720 NGARGFPGEVGAMGEQGA 737



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 72/155 (46%), Gaps = 24/155 (15%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  GA G+ G +GERGE G PG  G  G  G PG +G  G +G  G  GP   PG  G  
Sbjct: 778 GPAGAVGQQGERGERGEVGPPGRNGEAGAVGAPGLDGAPGERGSTGQVGP---PGQAGAT 834

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG----------------- 224
           GP+G+ G PG  G  G  G  G  G +G PG  G DG  G+ G                 
Sbjct: 835 GPQGERGNPGAPGFQGEPGPQGLAGANGEPGNAGRDGSDGQQGPMGPAGSTGPPGPPGEP 894

Query: 225 ----LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                 GKDG+PG  G  G KG  GP+G  G  G+
Sbjct: 895 GQPGAAGKDGLPGFPGLVGSKGSRGPQGRSGPPGL 929



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 86/180 (47%), Gaps = 30/180 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------PQGIPGDEGKRG- 161
           PG +G  G  GEIG  G  G+ G+RG+ G  G++G PG         P+G+ G+ G+RG 
Sbjct: 576 PGERGNSGPSGEIGMPGPPGLSGDRGDPGQAGLIGLPGERGPEGRAGPRGLTGNVGERGR 635

Query: 162 -----PKGDMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGE 204
                P G+ G  GP GI G  G    KGD G              G+ G+ G  G  G 
Sbjct: 636 DGEPGPPGETGVAGPPGIMGPSGIAAGKGDRGPSGPAGEPGPPGNVGQRGVAGLQGAQGP 695

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PGL G PG  G  G PG  G+ G +   G PG  G  GE+G  G  G +G  G  G PGT
Sbjct: 696 PGLSGSPGETGPSGEPGSPGVKGDNGARGFPGEVGAMGEQGAEGVAGRKGSRGEGGTPGT 755



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 72/148 (48%), Gaps = 21/148 (14%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  GAKG+ G  GERG +GA G  G  G  G PG  G+ G +G+       G PGD+G+R
Sbjct: 229 GSAGAKGDRGNAGERGPQGASGPPGNDGASGTPGSPGQPGQRGE------DGSPGDKGER 282

Query: 182 GPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  G                 G PG +G  G  G  G PG  G PG  G  G  G+ GLP
Sbjct: 283 GTVGSNGAPGFPGPQGPPGSSGAPGGMGPKGDAGRDGSPGSSGDPGPRGSPGSSGERGLP 342

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G+ G  G +G  G  GP G++G +G
Sbjct: 343 GLPGLEGKRGASGAVGPPGPSGSQGDAG 370



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 102/256 (39%), Gaps = 61/256 (23%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG---------------EIGAKGEMGVKGERGE-- 138
           L  ++G   ++    PPG  G  G  G               + G+ GE G  GERGE  
Sbjct: 344 LPGLEGKRGASGAVGPPGPSGSQGDAGSPGAPGLPGAGGAPGQRGSDGERGQTGERGEPG 403

Query: 139 ----------------KGAPGV---------VGPPGPQGIPGDEGKRGPKGDMGYP---G 170
                           +G+PG           GP G  G+ G  G++GP+G+ G P   G
Sbjct: 404 LTGQAGAPGPAGAPGARGSPGFPGLDGATGDRGPAGSNGLDGAPGEQGPQGNAGPPGLQG 463

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGR------------DGLP---GEPGLDGIPGRNG 215
           P G  G+ G  G  GD G PG  G  G             +G P   GE G  G  G  G
Sbjct: 464 PSGNKGETGAEGRSGDQGRPGPQGTRGERGPAGEPGPPGANGAPGQTGERGESGAIGPTG 523

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
             G+PG DG PG+ G PG  G +G  G  G  G RG+ G  G  G P       E  +  
Sbjct: 524 FQGLPGADGAPGESGNPGPQGESGAAGEPGIPGERGEQGFPGEIGQPGNRGAPGERGNSG 583

Query: 276 PNSETSQLLIPPTIVG 291
           P+ E   +  PP + G
Sbjct: 584 PSGEIG-MPGPPGLSG 598



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 90/249 (36%), Gaps = 87/249 (34%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------------EGKRGPKGDMGYPGPQ 172
           GA G MG KG+ G  G+PG  G PGP+G PG             EGKRG  G +G PGP 
Sbjct: 304 GAPGGMGPKGDAGRDGSPGSSGDPGPRGSPGSSGERGLPGLPGLEGKRGASGAVGPPGPS 363

Query: 173 GIPGDEG---------------KRGPKGDMGYPGRIGLDG---------------RDGLP 202
           G  GD G               +RG  G+ G  G  G  G                 G P
Sbjct: 364 GSQGDAGSPGAPGLPGAGGAPGQRGSDGERGQTGERGEPGLTGQAGAPGPAGAPGARGSP 423

Query: 203 GEPGLDGI------PGRNGMDGIPGK------------------------DGLPGKDGIP 232
           G PGLDG        G NG+DG PG+                        +G  G  G P
Sbjct: 424 GFPGLDGATGDRGPAGSNGLDGAPGEQGPQGNAGPPGLQGPSGNKGETGAEGRSGDQGRP 483

Query: 233 GTNGTNGEK---------------GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G  GT GE+               G TG RG  G  G  G  G P       ES +  P 
Sbjct: 484 GPQGTRGERGPAGEPGPPGANGAPGQTGERGESGAIGPTGFQGLPGADGAPGESGNPGPQ 543

Query: 278 SETSQLLIP 286
            E+     P
Sbjct: 544 GESGAAGEP 552



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 86/203 (42%), Gaps = 57/203 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---GVVGPP---GPQGIP---GDE----- 157
           PG +GP G+ G  G  G +G +G  GE G P   GV GPP   GP GI    GD      
Sbjct: 612 PGERGPEGRAGPRGLTGNVGERGRDGEPGPPGETGVAGPPGIMGPSGIAAGKGDRGPSGP 671

Query: 158 ----------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                     G+RG  G  G  GP G+ G  G+ GP G+ G PG  G +G  G PGE   
Sbjct: 672 AGEPGPPGNVGQRGVAGLQGAQGPPGLSGSPGETGPSGEPGSPGVKGDNGARGFPGE--- 728

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGT------------------------------NGT 237
            G  G  G +G+ G+ G  G+ G PGT                               G 
Sbjct: 729 VGAMGEQGAEGVAGRKGSRGEGGTPGTAGQPGQPGRIGPPGPPGAQGSLGPAGAVGQQGE 788

Query: 238 NGEKGMTGPRGNRGKSGINGVPG 260
            GE+G  GP G  G++G  G PG
Sbjct: 789 RGERGEVGPPGRNGEAGAVGAPG 811



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 69/157 (43%), Gaps = 36/157 (22%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            V  QG      E  PPG      + GE GA G  G+ G  GE+G+ G VGPPG  G  G
Sbjct: 782 AVGQQGERGERGEVGPPG------RNGEAGAVGAPGLDGAPGERGSTGQVGPPGQAGATG 835

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG------------------ 197
            +G+RG   + G PG QG PG +G  G  G+ G  GR G DG                  
Sbjct: 836 PQGERG---NPGAPGFQGEPGPQGLAGANGEPGNAGRDGSDGQQGPMGPAGSTGPPGPPG 892

Query: 198 ---------RDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
                    +DGLPG PGL G  G  G  G  G  GL
Sbjct: 893 EPGQPGAAGKDGLPGFPGLVGSKGSRGPQGRSGPPGL 929



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 78/179 (43%), Gaps = 39/179 (21%)

Query: 131 GVKGERGEKG---APGVVGPPGPQG---------------IPGDEGKRGPKGDMGYPGPQ 172
           G+ GERG  G   APG+ G  G  G                PG  G +G +G+ G  GPQ
Sbjct: 187 GIPGERGRDGNTGAPGLRGSDGQAGNSGSPGPIGPPGAAGFPGSAGAKGDRGNAGERGPQ 246

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN---------------GMD 217
           G  G  G  G  G  G PG+ G  G DG PG+ G  G  G N               G  
Sbjct: 247 GASGPPGNDGASGTPGSPGQPGQRGEDGSPGDKGERGTVGSNGAPGFPGPQGPPGSSGAP 306

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
           G  G  G  G+DG PG++G        GPRG+ G SG  G+PG P +   +  S ++ P
Sbjct: 307 GGMGPKGDAGRDGSPGSSGD------PGPRGSPGSSGERGLPGLPGLEGKRGASGAVGP 359



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 75/182 (41%), Gaps = 36/182 (19%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI--- 153
              +G   +  E  P G  GP G  G  G  G  G  G+RGE G+PG  G  G  G    
Sbjct: 231 AGAKGDRGNAGERGPQGASGPPGNDGASGTPGSPGQPGQRGEDGSPGDKGERGTVGSNGA 290

Query: 154 ------------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
                        G  G  GPKGD G     G PG  G  GP+G  G        G  GL
Sbjct: 291 PGFPGPQGPPGSSGAPGGMGPKGDAGR---DGSPGSSGDPGPRGSPGS------SGERGL 341

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDG------------IPGTNGTNGEKGMTGPRGN 249
           PG PGL+G  G +G  G PG  G  G  G             PG  G++GE+G TG RG 
Sbjct: 342 PGLPGLEGKRGASGAVGPPGPSGSQGDAGSPGAPGLPGAGGAPGQRGSDGERGQTGERGE 401

Query: 250 RG 251
            G
Sbjct: 402 PG 403



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 63/152 (41%), Gaps = 39/152 (25%)

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------P 205
           GP G +G  GP G PG  G  GPKG  G+PG+ G  G  G  G+                
Sbjct: 124 GPPGSIGSTGPVGRPGIPGLPGPKGHRGFPGQPGKVGETGKEGDRGASGPPGPAGGPGSV 183

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDG------------------IPGTNGTNGEKGMTGPR 247
           G  GIPG  G DG  G  GL G DG                   PG+ G  G++G  G R
Sbjct: 184 GPRGIPGERGRDGNTGAPGLRGSDGQAGNSGSPGPIGPPGAAGFPGSAGAKGDRGNAGER 243

Query: 248 GNRGKS------GINGVPGTPAICAYKRESCS 273
           G +G S      G +G PG+P     + E  S
Sbjct: 244 GPQGASGPPGNDGASGTPGSPGQPGQRGEDGS 275


>gi|348524342|ref|XP_003449682.1| PREDICTED: collagen alpha-1(V) chain-like [Oreochromis niloticus]
          Length = 2051

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 72/143 (50%), Gaps = 9/143 (6%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG------I 174
            +G  GA G  G+KG +GEKG  G  G  G  GI GD G+ GP G  G  GP+G      +
Sbjct: 1001 RGVKGADGVRGLKGHKGEKGEDGFPGFKGDMGIKGDRGELGPAGPRGEDGPEGPKGRSGL 1060

Query: 175  PGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            PGD G  GP   KG +G PG  G  GR G  G  G  G PG NG  G  G  G PG  G 
Sbjct: 1061 PGDAGPLGPSGEKGKLGVPGLPGYPGRQGPKGSQGFQGFPGANGEKGTRGTAGKPGPRGQ 1120

Query: 232  PGTNGTNGEKGMTGPRGNRGKSG 254
             G  G  GE+G  GP G  G  G
Sbjct: 1121 RGPTGPRGERGPRGPTGKAGPKG 1143



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 85/205 (41%), Gaps = 63/205 (30%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------------- 162
            G +G  G +G +G  GE+G  G PG+ G PG  G PG  GK GP                
Sbjct: 936  GAQGLPGPQGAIGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGEKGHMGPPGPQGPI 995

Query: 163  -----------------------KGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLD 196
                                   KG+ G+P   G  GI GD G+ GP G  G  G  G  
Sbjct: 996  GYPGPRGVKGADGVRGLKGHKGEKGEDGFPGFKGDMGIKGDRGELGPAGPRGEDGPEGPK 1055

Query: 197  GRDGLPGE---------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---- 237
            GR GLPG+               PGL G PGR G  G  G  G PG +G  GT GT    
Sbjct: 1056 GRSGLPGDAGPLGPSGEKGKLGVPGLPGYPGRQGPKGSQGFQGFPGANGEKGTRGTAGKP 1115

Query: 238  --NGEKGMTGPRGNRGKSGINGVPG 260
               G++G TGPRG RG  G  G  G
Sbjct: 1116 GPRGQRGPTGPRGERGPRGPTGKAG 1140



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 80/177 (45%), Gaps = 30/177 (16%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------------------- 149
            PG QG  G +G IG  GE G  G+ G  G PG  GPPG                      
Sbjct: 935  PGAQGLPGPQGAIGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGEKGHMGPPGPQGP 994

Query: 150  -----PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                 P+G+ G +G RG KG  G  G  G PG +G  G KGD G  G  G  G DG  G 
Sbjct: 995  IGYPGPRGVKGADGVRGLKGHKGEKGEDGFPGFKGDMGIKGDRGELGPAGPRGEDGPEGP 1054

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G+PG  G  G  G+ G   K G+PG  G  G +G  G +G +G  G NG  GT
Sbjct: 1055 KGRSGLPGDAGPLGPSGEKG---KLGVPGLPGYPGRQGPKGSQGFQGFPGANGEKGT 1108



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 73/151 (48%), Gaps = 12/151 (7%)

Query: 142  PGVVGPPGPQGIPGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPKGDMGYPGRIGL 195
            PG  G PGPQG  G  G++GP G  G P      GP G PG EG  G KG MG PG  G 
Sbjct: 935  PGAQGLPGPQGAIGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGEKGHMGPPGPQGP 994

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G  G  G  G DG+ G  G  G  G+DG PG  G  G  G  GE G  GPRG  G  G 
Sbjct: 995  IGYPGPRGVKGADGVRGLKGHKGEKGEDGFPGFKGDMGIKGDRGELGPAGPRGEDGPEGP 1054

Query: 256  NGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
             G  G P       ++  L P+ E  +L +P
Sbjct: 1055 KGRSGLPG------DAGPLGPSGEKGKLGVP 1079



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 12/106 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G +GP G+ G  G  G +G  GE+G+ G P         G+PG  G++GPKG  G+   Q
Sbjct: 1050 GPEGPKGRSGLPGDAGPLGPSGEKGKLGVP---------GLPGYPGRQGPKGSQGF---Q 1097

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
            G PG  G++G +G  G PG  G  G  G  GE G  G  G+ G  G
Sbjct: 1098 GFPGANGEKGTRGTAGKPGPRGQRGPTGPRGERGPRGPTGKAGPKG 1143



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 3/65 (4%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
            PGL G  G++G  G++G  G  G  GEKG  G  G PGP+G     G  G+RGP+G  G 
Sbjct: 1079 PGLPGYPGRQGPKGSQGFQGFPGANGEKGTRGTAGKPGPRGQRGPTGPRGERGPRGPTGK 1138

Query: 169  PGPQG 173
             GP+G
Sbjct: 1139 AGPKG 1143



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 30/48 (62%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            KG+ GVKGE+G  G  G++GPPG QG  GD G  GP G  G  G  GI
Sbjct: 1682 KGDSGVKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPSGSAGPKGDNGI 1729



 Score = 40.0 bits (92), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 63/161 (39%), Gaps = 60/161 (37%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR------------------------GPK 184
           G +G+PG   + GPKGD G+ G  G+PG++G R                        GP+
Sbjct: 825 GARGMPG---QTGPKGDRGFDGLAGLPGEKGHRGEPGPHGPPGGPGEDGERGDDGEIGPR 881

Query: 185 GDMGYPGRIGL---------------DGRDGLPG------------------EPGLDGIP 211
           G  G PG  GL                G DG PG                   PG  G+P
Sbjct: 882 GLPGEPGPRGLLGPKGPQGPPGPPGVTGMDGHPGPKGNIGPQGEPGPPGQQGNPGAQGLP 941

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
           G  G  G PG+ G  GK G+PG  G +G  G  G  G  G+
Sbjct: 942 GPQGAIGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGE 982



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 74/162 (45%), Gaps = 33/162 (20%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------------IPGDEGKRGPK 163
           G  GA+G  G  G +G++G  G+ G PG +G                    GD+G+ GP+
Sbjct: 822 GADGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGEPGPHGPPGGPGEDGERGDDGEIGPR 881

Query: 164 GDMGYPGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  G PGP+G+ G                +G  GPKG++G  G  G  G+ G PG  GL 
Sbjct: 882 GLPGEPGPRGLLGPKGPQGPPGPPGVTGMDGHPGPKGNIGPQGEPGPPGQQGNPGAQGLP 941

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G  G  G  G  G  G PG  G+PG +G  G  G  GP G +
Sbjct: 942 GPQGAIGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGEK 983


>gi|426253385|ref|XP_004020377.1| PREDICTED: collagen alpha-1(XVII) chain [Ovis aries]
          Length = 1442

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 86/191 (45%), Gaps = 47/191 (24%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           +G  G KG+MG++G +G++G PG  G PGP G  G EG +G KG+MG PG +G  G  G+
Sbjct: 574 RGSPGPKGDMGIQGPKGDRGFPGTPGIPGPLGHQGPEGPKGQKGNMGEPGMEGPMGQRGR 633

Query: 181 -----------------RGPKGDM------------------GYPGRIGLDGRDGLPG-- 203
                            +G +GD                   G  G  GL G  GLPG  
Sbjct: 634 EGPMGPRGEPGPPGFGEKGDRGDAGKPGIPGPPGVPGSVGPKGSIGPQGLRGEVGLPGIK 693

Query: 204 ----------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                       G  G  G  G+ G PG  GLPG  G PG  G  G  G  G +G RG+ 
Sbjct: 694 GDKGPMGPPGPKGDQGEKGPRGLTGEPGLKGLPGAVGEPGAKGAMGPAGPDGHQGPRGEQ 753

Query: 254 GINGVPGTPAI 264
           G+ G+PGT  +
Sbjct: 754 GLPGMPGTRGL 764



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 72/127 (56%), Gaps = 12/127 (9%)

Query: 116 GPIGQKGEIGAKG---------EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           GP G +GE+G  G           G KG++GEKG  G+ G PG +G+PG  G+ G KG M
Sbjct: 679 GPQGLRGEVGLPGIKGDKGPMGPPGPKGDQGEKGPRGLTGEPGLKGLPGAVGEPGAKGAM 738

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  GP    G +G RG +G  G PG  GL G  G PG+PGL G  G  G+ G PG+ G+ 
Sbjct: 739 GPAGPD---GHQGPRGEQGLPGMPGTRGLPGPSGDPGKPGLTGPQGPQGIPGTPGRPGVK 795

Query: 227 GKDGIPG 233
           G+ G PG
Sbjct: 796 GEPGAPG 802



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/128 (48%), Positives = 74/128 (57%), Gaps = 6/128 (4%)

Query: 127 KGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           KG +G +G RGE G PG+    GP GP G  GD+G++GP+G  G PG +G+PG  G+ G 
Sbjct: 675 KGSIGPQGLRGEVGLPGIKGDKGPMGPPGPKGDQGEKGPRGLTGEPGLKGLPGAVGEPGA 734

Query: 184 KGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           KG MG     G  G  G  GLPG PG  G+PG +G  G PG  G  G  GIPGT G  G 
Sbjct: 735 KGAMGPAGPDGHQGPRGEQGLPGMPGTRGLPGPSGDPGKPGLTGPQGPQGIPGTPGRPGV 794

Query: 241 KGMTGPRG 248
           KG  G  G
Sbjct: 795 KGEPGAPG 802



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 12/96 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G   +  E    G  GP G  G  G +GE G+ G  G +G PG  G PG  G+ G +
Sbjct: 721 GLKGLPGAVGEPGAKGAMGPAGPDGHQGPRGEQGLPGMPGTRGLPGPSGDPGKPGLTGPQ 780

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
                       GPQGIPG  G+ G KG+ G PG+I
Sbjct: 781 ------------GPQGIPGTPGRPGVKGEPGAPGKI 804


>gi|469548|gb|AAB60258.1| collagen type IV A5 chain, partial [Canis lupus familiaris]
          Length = 754

 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 88/175 (50%), Gaps = 20/175 (11%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L G  G+KG+ G  G  GV G +G +G PG  G PG  G PG  G  GPKG+ G PG  G
Sbjct: 35  LLGSKGEKGDPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPG 94

Query: 174 IPGDEGKRGPKGDMGYPGRIG------------------LDGRDGLPGEPGLDGI--PGR 213
           + G  G +G  GDMG+PG  G                  L G+ G  G+PG+ GI  PG 
Sbjct: 95  LTGPPGLKGSIGDMGFPGPQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGVSGIGLPGL 154

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G  G  G PG  GI G+ G  G  G+ G  G +G+ G+ G PGTP +   K
Sbjct: 155 PGPKGEAGLPGYPGNPGIKGSMGDTGLPGLPGTPGAKGQPGLPGFPGTPGLPGPK 209



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 80/158 (50%), Gaps = 23/158 (14%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QG  G  G+ G  G+ G+ G  G KG PG+ G PG  G PG +G     GDMG+PG
Sbjct: 56  PKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPGLTGPPGLKGS---IGDMGFPG 112

Query: 171 PQGI------------------PGDEGKRGPKG--DMGYPGRIGLDGRDGLPGEPGLDGI 210
           PQG+                  PG +G++G  G   +G PG  G  G  GLPG PG  GI
Sbjct: 113 PQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGVSGIGLPGLPGPKGEAGLPGYPGNPGI 172

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            G  G  G+PG  G PG  G PG  G  G  G+ GP+G
Sbjct: 173 KGSMGDTGLPGLPGTPGAKGQPGLPGFPGTPGLPGPKG 210



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 90/256 (35%), Gaps = 112/256 (43%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------------ 153
           PG++G +G  G  G  G  G KG+ G  G PG  G PGP+GI                  
Sbjct: 170 PGIKGSMGDTGLPGLPGTPGAKGQPGLPGFPGTPGLPGPKGINGPPGNPGLPGEPGPVGG 229

Query: 154 ---------------------PGDEGKRGP--------------------KGDMGYPGPQ 172
                                PG  G++G                     KGD G P   
Sbjct: 230 GGRPWPPGPPGEKGNPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGLSGQKGDGGLP--- 286

Query: 173 GIPGDEGKRGPKGDMGY------------------------------------------- 189
           GIPG+ G  GPKG+ G+                                           
Sbjct: 287 GIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEG 346

Query: 190 ----PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
               PG  G+ G  G PG+PG  G+PG  G  G PG  G PG+   PG NG  G+ G+ G
Sbjct: 347 PRGLPGNGGIKGERGNPGQPGQPGLPGLKGDQGPPGIQGNPGR---PGLNGMKGDPGLPG 403

Query: 246 PRGNRGKSGINGVPGT 261
             G  G  G +GVPG+
Sbjct: 404 VPGFPGMKGPSGVPGS 419



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G KGE G  G+ G+ G PG+    GPPG QG PG  G  G KGD G PG  G PG +
Sbjct: 352 GNGGIKGERGNPGQPGQPGLPGLKGDQGPPGIQGNPGRPGLNGMKGDPGLPGVPGFPGMK 411

Query: 179 GKRGPKGDMG 188
           G  G  G  G
Sbjct: 412 GPSGVPGSAG 421



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 59/150 (39%), Gaps = 50/150 (33%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------------------- 147
           GQKG+ G  G  G  G  G KG PG  G                                
Sbjct: 278 GQKGDGGLPGIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPG 337

Query: 148 -------------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
                        PG  GI G+       G+ G PG  G+PG +G +GP G  G PGR G
Sbjct: 338 RPGLPGPEGPRGLPGNGGIKGER------GNPGQPGQPGLPGLKGDQGPPGIQGNPGRPG 391

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           L+G  G PG PG+ G PG  G  G+PG  G
Sbjct: 392 LNGMKGDPGLPGVPGFPGMKGPSGVPGSAG 421



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP G+ G  G  G  G+KG  G+ G PG+ G PG +G PG  G     G  G PGP
Sbjct: 152 PGLPGPKGEAGLPGYPGNPGIKGSMGDTGLPGLPGTPGAKGQPGLPGF---PGTPGLPGP 208

Query: 172 QGI 174
           +GI
Sbjct: 209 KGI 211


>gi|410959520|ref|XP_003986355.1| PREDICTED: collagen alpha-1(XIX) chain-like [Felis catus]
          Length = 705

 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 93/200 (46%), Gaps = 47/200 (23%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E   PG  G IG KG+ G  GE   KGE+G++G PG++G  G +G PGD G  G  G  G
Sbjct: 26  EAGQPGFPGSIGPKGQKGESGEAFTKGEKGDRGEPGIMGSQGIKGEPGDPGAPGLIGSPG 85

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG--------------------------- 200
             G QG  G  G RGP GD+G PG  G+ G+ G                           
Sbjct: 86  LKGQQGPEGSMGPRGPPGDIGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPP 145

Query: 201 ---LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG--------------TNGTNGEKGM 243
              LPGEPGLDG PG  G  G  G+ GLPG  G PG              + G  GE G+
Sbjct: 146 GKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDRGPPGLGVPGPTGSQGPAGEPGI 205

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            GP   RG  G+ G PGTP 
Sbjct: 206 QGP---RGLPGLPGTPGTPG 222



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 67/147 (45%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG----------------EK 139
           L   QG   S     PPG    IG  GE G  G+ G+KGE+G                E 
Sbjct: 86  LKGQQGPEGSMGPRGPPGD---IGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEA 142

Query: 140 GAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-----------KRGPKGD 186
           G PG  + G PG  G PG  G RGPKG+ G PG  G PGD G            +GP G+
Sbjct: 143 GPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDRGPPGLGVPGPTGSQGPAGE 202

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG PGR
Sbjct: 203 PGIQGPRGLPGLPGTPGTPGNDGAPGR 229



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 69/145 (47%), Gaps = 27/145 (18%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGDMGYPGPQ 172
           G +G  G+KG+RG  G PG+       GI G  G             RGP GD G+PGP+
Sbjct: 429 GLEGFPGIKGDRGPAGPPGIA------GISGKPGAPGPPGVPGEPGDRGPVGDTGFPGPE 482

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                    GP G  G  G+ GL G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 483 ---------GPSGRPGINGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGEQGKP 533

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G  GP GN+G +G  G
Sbjct: 534 GLPGMKGAIGPVGPPGNKGSTGSPG 558



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 61/135 (45%), Gaps = 36/135 (26%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
           PG  G+PG EG  G KGD G  GP GI G               + G RGP GD G+PG 
Sbjct: 422 PGAMGLPGLEGFPGIKGDRGPAGPPGIAGISGKPGAPGPPGVPGEPGDRGPVGDTGFPGP 481

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGN 249
            G  GR G                  I GKDGLPG  GI   PG  G  GE+G  G  G+
Sbjct: 482 EGPSGRPG------------------INGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGD 523

Query: 250 RGKSGINGVPGTPAI 264
           RG  G  G PG P +
Sbjct: 524 RGPQGEQGKPGLPGM 538



 Score = 40.4 bits (93), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG  G  GPKG  G  G     G  G  GEPG   I G  G+ G PG  G PG  G P
Sbjct: 28  GQPGFPGSIGPKGQKGESGEAFTKGEKGDRGEPG---IMGSQGIKGEPGDPGAPGLIGSP 84

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G  G +G  GPRG  G  G+ G  G P     K E
Sbjct: 85  GLKGQQGPEGSMGPRGPPGDIGLPGEHGIPGKQGIKGE 122


>gi|8393173|ref|NP_058615.1| collagen alpha-3(V) chain precursor [Mus musculus]
 gi|7329072|gb|AAF59901.1|AF176645_1 collagen type V alpha 3 chain [Mus musculus]
 gi|148693183|gb|EDL25130.1| procollagen, type V, alpha 3, isoform CRA_b [Mus musculus]
 gi|187957580|gb|AAI38420.1| Collagen, type V, alpha 3 [Mus musculus]
 gi|223459912|gb|AAI38418.1| Collagen, type V, alpha 3 [Mus musculus]
          Length = 1739

 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 85/173 (49%), Gaps = 21/173 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVGPPGPQGIPGD 156
            PG  GPIG KG+ G  G +G  G  GE+G                 G +GP G +G PG+
Sbjct: 984  PGDPGPIGLKGDKGPPGPVGANGSPGERGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGE 1043

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G  GP G  G PGP G+ G  G  GP      KG++G PG  G  G  G  G PG  GI
Sbjct: 1044 RGTPGPTGKDGIPGPPGLQGPSGAAGPSGEEGDKGEVGMPGHKGSKGDKGDAGPPGPTGI 1103

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G  G  G+PG DG  G+ G PG  G  G+ G+ G  G  G  G+ G+PG P 
Sbjct: 1104 RGPAGHSGLPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPG 1156



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/142 (45%), Positives = 77/142 (54%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            GL G  G +G IG  GE G  GERG  G  G  G PGP G+ G  G  GP G+ G  G  
Sbjct: 1021 GLPGQSGGQGPIGPAGEKGSPGERGTPGPTGKDGIPGPPGLQGPSGAAGPSGEEGDKGEV 1080

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
            G+PG +G +G KGD G PG  G+ G  G  G PG DG  GR G  G+ G+ G  G  G  
Sbjct: 1081 GMPGHKGSKGDKGDAGPPGPTGIRGPAGHSGLPGADGAQGRRGPPGLFGQKGDDGVRGFV 1140

Query: 233  GTNGTNGEKGMTGPRGNRGKSG 254
            G  G  G +G+ GP G +G+ G
Sbjct: 1141 GVIGPPGLQGLPGPPGEKGEVG 1162



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 89/182 (48%), Gaps = 21/182 (11%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQ------KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           +G         PPG  GP G       KG  G +G  G KGERGE G PG  G  GP+G 
Sbjct: 687 EGPTGEKGAQGPPGSAGPRGYPGLRGVKGTSGNRGLQGEKGERGEDGFPGFKGDEGPKGD 746

Query: 154 PGD------------EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            G+            EG++GP G  G  GP G  G++GK G  G  GYPGR G  G  G 
Sbjct: 747 RGNPGPPGPRGEDGPEGQKGPGGLPGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGF 806

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG  G  G  G+ G  G PG++   G+ G PGT G  G+ G TG  G +G  G NG PG 
Sbjct: 807 PGPLGPLGEKGKRGKAGQPGEE---GERGTPGTRGDRGQPGATGQPGPKGDVGQNGSPGP 863

Query: 262 PA 263
           P 
Sbjct: 864 PG 865



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 79/181 (43%), Positives = 97/181 (53%), Gaps = 8/181 (4%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGD 177
            +G  GAKGE+G  G  G++G PG  G PGPQG PGD G  G KGD G PGP    G PG+
Sbjct: 951  EGREGAKGELGPLGSVGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPPGPVGANGSPGE 1010

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
             G  GP G +G PG+ G  G  G  GE   PG  G PG  G DGIPG  GL G  G  G 
Sbjct: 1011 RGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGERGTPGPTGKDGIPGPPGLQGPSGAAGP 1070

Query: 235  NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESC-SLLPNSETSQ-LLIPPTIVGS 292
            +G  G+KG  G  G++G  G  G  G P     +  +  S LP ++ +Q    PP + G 
Sbjct: 1071 SGEEGDKGEVGMPGHKGSKGDKGDAGPPGPTGIRGPAGHSGLPGADGAQGRRGPPGLFGQ 1130

Query: 293  E 293
            +
Sbjct: 1131 K 1131



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 78/153 (50%), Gaps = 21/153 (13%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPPGPQG 152
           PPG  G  G+ G +G  G  G+KGE GE                  +G  G  G  G +G
Sbjct: 479 PPGPVGLTGRPGPVGLPGYPGLKGELGEVGPQGPRGLQGPPGPPGREGKTGRAGADGARG 538

Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
           +PGD    GPKGD G+ G  G+PG++G+RG  G +G PG  G DG  GL G PG  G  G
Sbjct: 539 LPGD---TGPKGDRGFDGLPGLPGEKGQRGDFGRVGQPGPPGEDGVKGLQGPPGPTGQAG 595

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G  G+ G  GLPG  G PG  G++G  G  G
Sbjct: 596 EPGPRGLIGPRGLPGPLGRPGVTGSDGAPGAKG 628



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 86/169 (50%), Gaps = 24/169 (14%)

Query: 114  LQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDEG 158
            ++G  G KGE+G  G +G                 G+ G  G  G  GPPGP G  G  G
Sbjct: 950  IEGREGAKGELGPLGSVGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPPGPVGANGSPG 1009

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNG 215
            +RGP G  G  G  G  G +G  GP G+ G PG  G     G+DG+PG PGL G    +G
Sbjct: 1010 ERGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGERGTPGPTGKDGIPGPPGLQGP---SG 1066

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPGT 261
              G  G++G  G+ G+PG  G+ G+KG  GP G    RG +G +G+PG 
Sbjct: 1067 AAGPSGEEGDKGEVGMPGHKGSKGDKGDAGPPGPTGIRGPAGHSGLPGA 1115



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 81/166 (48%), Gaps = 33/166 (19%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GQKG  G  G+ G  G  GEKG  GV       G+PG  G+ GPKG +G+PGP G  G++
Sbjct: 763 GQKGPGGLPGDEGPPGAAGEKGKLGV------PGLPGYPGRPGPKGSIGFPGPLGPLGEK 816

Query: 179 GKR------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP------ 226
           GKR      G +G+ G PG  G  G+ G  G+PG  G  G+NG  G PG+ GLP      
Sbjct: 817 GKRGKAGQPGEEGERGTPGTRGDRGQPGATGQPGPKGDVGQNGSPGPPGEKGLPGLQGPP 876

Query: 227 ---------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                          G  G PG  G  G +G+TGP G  G  G  G
Sbjct: 877 GFPGPKGPPGPQGKDGISGHPGQRGELGFQGLTGPPGPAGVLGPQG 922



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 77/166 (46%), Gaps = 30/166 (18%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG-- 176
            G  G+ G+ G MG +G  GEKGA G  GP GP G  G  G RGP G +G  G  GIPG  
Sbjct: 1306 GLPGKRGSPGRMGPEGREGEKGAKGDAGPDGPPGRTGPIGARGPPGRIGPDGLPGIPGPV 1365

Query: 177  -------------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                                      +G  GPKG+ G+ G IGL G  G  GE G  G+P
Sbjct: 1366 GEPGLLGPPGLIGPPGPLGPPGLPGLKGDAGPKGEKGHIGLIGLIGPPGEAGEKGDQGLP 1425

Query: 212  GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G+ G  GLPG     G+ G  G  G+ GP G +G  G  G
Sbjct: 1426 GVQGPPGLQGDPGLPGPV---GSLGHPGPPGVVGPLGQKGSKGSPG 1468



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 85/186 (45%), Gaps = 36/186 (19%)

Query: 112 PGLQGPIGQKGE------------------IGAKGEMGVKGERGEKGAPGVVGP---PGP 150
           PG QGPIG  GE                   G  G  G  GE+G +G PG  GP   PG 
Sbjct: 651 PGPQGPIGTPGEKGPPGNPGIPGVPGSEGPPGHPGHEGPTGEKGAQGPPGSAGPRGYPGL 710

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---------GLDGRDGL 201
           +G+ G  G RG +G+ G  G  G PG +G  GPKGD G PG           G  G  GL
Sbjct: 711 RGVKGTSGNRGLQGEKGERGEDGFPGFKGDEGPKGDRGNPGPPGPRGEDGPEGQKGPGGL 770

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGI 255
           PG+ G  G  G  G  G+PG  G PG+       G PG  G  GEKG  G  G  G+ G 
Sbjct: 771 PGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPGEEGE 830

Query: 256 NGVPGT 261
            G PGT
Sbjct: 831 RGTPGT 836



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 78/190 (41%), Gaps = 60/190 (31%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGD------------------------------EGKR 160
            G  G+RGE G  G+ GPPGP G+ G                               EG+ 
Sbjct: 895  GHPGQRGELGFQGLTGPPGPAGVLGPQGKVGDVGPLGERGPPGPPGPPGEQGLPGIEGRE 954

Query: 161  GPKGDMGY------------------------PGPQGIPGDEGKRGPKGDMGYPGR---I 193
            G KG++G                         PGP G+ GD+G  GP G  G PG    +
Sbjct: 955  GAKGELGPLGSVGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPPGPVGANGSPGERGPV 1014

Query: 194  GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G  GLPG+ G  G  G  G  G PG+ G P   GKDGIPG  G  G  G  GP G  
Sbjct: 1015 GPSGGIGLPGQSGGQGPIGPAGEKGSPGERGTPGPTGKDGIPGPPGLQGPSGAAGPSGEE 1074

Query: 251  GKSGINGVPG 260
            G  G  G+PG
Sbjct: 1075 GDKGEVGMPG 1084



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 73/154 (47%), Gaps = 24/154 (15%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------------------GIPGD 177
           +G  G  G+ G PGP G+PG  G    KG++G  GPQ                  G  G 
Sbjct: 477 KGPPGPVGLTGRPGPVGLPGYPGL---KGELGEVGPQGPRGLQGPPGPPGREGKTGRAGA 533

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
           +G RG  GD G  G  G DG  GLPGE G  G  GR G  G PG+DG+ G  G PG  G 
Sbjct: 534 DGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGRVGQPGPPGEDGVKGLQGPPGPTGQ 593

Query: 238 NGE---KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            GE   +G+ GPRG  G  G  GV G+      K
Sbjct: 594 AGEPGPRGLIGPRGLPGPLGRPGVTGSDGAPGAK 627



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 84/185 (45%), Gaps = 36/185 (19%)

Query: 112 PGLQGPIGQKGEIG------AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PGL G  GQ+G+ G        GE GVKG +G  G  G  G PGP+G+ G  G  GP G 
Sbjct: 555 PGLPGEKGQRGDFGRVGQPGPPGEDGVKGLQGPPGPTGQAGEPGPRGLIGPRGLPGPLGR 614

Query: 166 MGYPGPQGIP---------------------GDEGKRGPKGDMGYPGR---------IGL 195
            G  G  G P                     G +G  GP+G +G PG           G+
Sbjct: 615 PGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQGPIGTPGEKGPPGNPGIPGV 674

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G +G PG PG +G  G  G  G PG  G  G  G+ G  GT+G +G+ G +G RG+ G 
Sbjct: 675 PGSEGPPGHPGHEGPTGEKGAQGPPGSAGPRGYPGLRGVKGTSGNRGLQGEKGERGEDGF 734

Query: 256 NGVPG 260
            G  G
Sbjct: 735 PGFKG 739



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 69/149 (46%), Gaps = 15/149 (10%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            +   G   S  E   PG  G  G  G  G +G  G  G  GE+G  G VG PG +G  GD
Sbjct: 1032 IGPAGEKGSPGERGTPGPTGKDGIPGPPGLQGPSGAAGPSGEEGDKGEVGMPGHKGSKGD 1091

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
                  KGD G PGP GI      RGP G  G PG  G  GR    G PGL G  G +G+
Sbjct: 1092 ------KGDAGPPGPTGI------RGPAGHSGLPGADGAQGRR---GPPGLFGQKGDDGV 1136

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G  G  G PG  G+PG  G  GE G  G
Sbjct: 1137 RGFVGVIGPPGLQGLPGPPGEKGEVGDVG 1165



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 75/155 (48%), Gaps = 15/155 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G  GE G  G  G+ G  G  G  G +G PGP G  G++GKRG  G  G  G 
Sbjct: 771 PGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPGEEGE 830

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---------------PGRNGM 216
           +G PG  G RG  G  G PG  G  G++G PG PG  G+               PG  G 
Sbjct: 831 RGTPGTRGDRGQPGATGQPGPKGDVGQNGSPGPPGEKGLPGLQGPPGFPGPKGPPGPQGK 890

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           DGI G  G  G+ G  G  G  G  G+ GP+G  G
Sbjct: 891 DGISGHPGQRGELGFQGLTGPPGPAGVLGPQGKVG 925



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 83/194 (42%), Gaps = 54/194 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G +G  G  G  G KG+RG+ G  G  GPPG  G+ G +G  GP G  G PGP
Sbjct: 540 PGDTGPKGDRGFDGLPGLPGEKGQRGDFGRVGQPGPPGEDGVKGLQGPPGPTGQAGEPGP 599

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------LDGIPGR 213
           +G+       GP+G  G  GR G+ G DG PG  G                    GIPG 
Sbjct: 600 RGL------IGPRGLPGPLGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGP 653

Query: 214 NGMDGIPGK---------------DGLPGKDGIPGTNGTNGEKGMTGP------------ 246
            G  G PG+               +G PG    PG  G  GEKG  GP            
Sbjct: 654 QGPIGTPGEKGPPGNPGIPGVPGSEGPPGH---PGHEGPTGEKGAQGPPGSAGPRGYPGL 710

Query: 247 RGNRGKSGINGVPG 260
           RG +G SG  G+ G
Sbjct: 711 RGVKGTSGNRGLQG 724



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 83/222 (37%), Gaps = 72/222 (32%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGP-------- 147
           P GL GP+G+ G  G+ G  G KG                 G +G PG  GP        
Sbjct: 605 PRGLPGPLGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQGPIGTPGEKG 664

Query: 148 -------------PGPQGIPGDEGKRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPG 191
                         GP G PG EG  G KG  G P   GP+G PG  G +G  G+ G  G
Sbjct: 665 PPGNPGIPGVPGSEGPPGHPGHEGPTGEKGAQGPPGSAGPRGYPGLRGVKGTSGNRGLQG 724

Query: 192 RIGLDGRDGLP---------------------------------GEPGLDGIPGRNGMDG 218
             G  G DG P                                 G PG +G PG  G  G
Sbjct: 725 EKGERGEDGFPGFKGDEGPKGDRGNPGPPGPRGEDGPEGQKGPGGLPGDEGPPGAAGEKG 784

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  GLPG  G PG  G+ G  G  GP G +GK G  G PG
Sbjct: 785 KLGVPGLPGYPGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPG 826



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 66/171 (38%), Gaps = 54/171 (31%)

Query: 139  KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            +G PG  G PG  G  G EG++G KGD G  GP G  G  G RGP      PGRIG DG 
Sbjct: 1305 RGLPGKRGSPGRMGPEGREGEKGAKGDAGPDGPPGRTGPIGARGP------PGRIGPDGL 1358

Query: 199  DGLP------------------------------------------------GEPGLDGI 210
             G+P                                                G PG  G 
Sbjct: 1359 PGIPGPVGEPGLLGPPGLIGPPGPLGPPGLPGLKGDAGPKGEKGHIGLIGLIGPPGEAGE 1418

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G+ G+ G  GL G  G+PG  G+ G  G  G  G  G+ G  G PG+
Sbjct: 1419 KGDQGLPGVQGPPGLQGDPGLPGPVGSLGHPGPPGVVGPLGQKGSKGSPGS 1469


>gi|363735738|ref|XP_421846.3| PREDICTED: collagen alpha-2(V) chain [Gallus gallus]
          Length = 1528

 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 90/189 (47%), Gaps = 21/189 (11%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G +G+ G  G  G KGE G KG PG  GP GP G  G+EGKRGP+GD G  GP 
Sbjct: 458 GSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPQGPQGPIGPIGEEGKRGPRGDPGSVGP- 516

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
             PG  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+P
Sbjct: 517 --PGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPAGSSGPKGGQGDPGR---PGEPGLP 571

Query: 233 GTNGTNGEKGMTGPR---------------GNRGKSGINGVPGTPAICAYKRESCSLLPN 277
           G  G  G  G+ GP                G  G  GI G PG+  +   K  S      
Sbjct: 572 GARGLTGNPGVQGPEGKLGPLGGPGEDGRPGPAGSIGIRGQPGSMGLSGPKGSSGDPGKP 631

Query: 278 SETSQLLIP 286
            E     +P
Sbjct: 632 GEAGNAGVP 640



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 89/196 (45%), Gaps = 39/196 (19%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------- 158
           PG  G  G KGE G  G  G +G +G++G  G  GP G QG+PG EG             
Sbjct: 379 PGFPGAPGMKGEAGPTGPRGPEGPQGQRGETGPQGPAGSQGLPGTEGTDGSPGAKGPTGS 438

Query: 159 --------------------KRGPKGDMGYPGPQGIPGDEGKRGPKGD------MGYPGR 192
                                 GP G  G PG  G+PG +G+ GPKG+       G  G 
Sbjct: 439 PGTGGPPGLLGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPQGPQGPIGP 498

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
           IG +G+ G  G+PG  G PG  G  G PG  G PG DG+PG  G  GE+G  G  G +G 
Sbjct: 499 IGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPAGSSGPKGG 558

Query: 253 SGINGVPGTPAICAYK 268
            G  G PG P +   +
Sbjct: 559 QGDPGRPGEPGLPGAR 574



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 88/170 (51%), Gaps = 24/170 (14%)

Query: 112 PGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           PG +G  G KGE G +G       +G +G+RG +G PG VGPPGP G  G  G RG  G 
Sbjct: 475 PGFKGEAGPKGEPGPQGPQGPIGPIGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGS 534

Query: 166 MGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------- 215
            G PGP+G  G+    G  GPKG  G PGR    G  GLPG  GL G PG  G       
Sbjct: 535 DGLPGPKGAQGERGPAGSSGPKGGQGDPGR---PGEPGLPGARGLTGNPGVQGPEGKLGP 591

Query: 216 -----MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                 DG PG  G  G  G PG+ G +G KG +G  G  G++G  GVPG
Sbjct: 592 LGGPGEDGRPGPAGSIGIRGQPGSMGLSGPKGSSGDPGKPGEAGNAGVPG 641



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 87/189 (46%), Gaps = 42/189 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL+G  G KGEIGA    G KGE G  GA G  GP GP+G+PG+ G+ GP         Q
Sbjct: 305 GLKGLDGPKGEIGA---AGAKGESGPTGAMGATGPLGPRGMPGERGRIGP---------Q 352

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------GRNGMDGIPGKD 223
           G PG  G+ G  G  G  G +G+ G  G PG PG+ G           G  G  G  G  
Sbjct: 353 GAPGGRGQHGMPGKPGPMGPLGITGSPGFPGAPGMKGEAGPTGPRGPEGPQGQRGETGPQ 412

Query: 224 GLPGKDGIPGTNGTNGEKGM---------------------TGPRGNRGKSGINGVPGTP 262
           G  G  G+PGT GT+G  G                       GP+G+ G  GI G PG P
Sbjct: 413 GPAGSQGLPGTEGTDGSPGAKGPTGSPGTGGPPGLLGPPGSPGPQGSTGPPGIRGQPGDP 472

Query: 263 AICAYKRES 271
            +  +K E+
Sbjct: 473 GVPGFKGEA 481



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 80/153 (52%), Gaps = 9/153 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G +G  GA G  G+KG RG KG   + GP G  G  G +G+ GP G MG  GP
Sbjct: 280 PGFPGSPGPRGFPGAPGLPGLKGHRGLKG---LDGPKGEIGAAGAKGESGPTGAMGATGP 336

Query: 172 ---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
              +G+PG+ G+ GP+   G PG  G  G  G PG  G  GI G  G  G PG  G  G 
Sbjct: 337 LGPRGMPGERGRIGPQ---GAPGGRGQHGMPGKPGPMGPLGITGSPGFPGAPGMKGEAGP 393

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G  G  G  G++G TGP+G  G  G+ G  GT
Sbjct: 394 TGPRGPEGPQGQRGETGPQGPAGSQGLPGTEGT 426



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 70/139 (50%), Gaps = 9/139 (6%)

Query: 128 GEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           GE G  G+ GE G PG  GP   PG  G+PG +G RG KG  G  G  G  G +G+ GP 
Sbjct: 269 GEPGRPGQSGEPGFPGSPGPRGFPGAPGLPGLKGHRGLKGLDGPKGEIGAAGAKGESGPT 328

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDGIPGTNGTN 238
           G MG  G +G  G  G  G  G  G PG  G  G+PGK G      + G  G PG  G  
Sbjct: 329 GAMGATGPLGPRGMPGERGRIGPQGAPGGRGQHGMPGKPGPMGPLGITGSPGFPGAPGMK 388

Query: 239 GEKGMTGPRGNRGKSGING 257
           GE G TGPRG  G  G  G
Sbjct: 389 GEAGPTGPRGPEGPQGQRG 407



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 80/174 (45%), Gaps = 27/174 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G IG +G  G +G+ G+ G+ G  G  G+ G PG  G PG +G+ GP G  G  GP
Sbjct: 343 PGERGRIGPQGAPGGRGQHGMPGKPGPMGPLGITGSPGFPGAPGMKGEAGPTGPRGPEGP 402

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP------------------------GL 207
           QG  G+ G +GP G  G PG    +G DG PG                          G 
Sbjct: 403 QGQRGETGPQGPAGSQGLPG---TEGTDGSPGAKGPTGSPGTGGPPGLLGPPGSPGPQGS 459

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G PG  G  G PG  G  G+ G  G  G  G +G  GP G  GK G  G PG+
Sbjct: 460 TGPPGIRGQPGDPGVPGFKGEAGPKGEPGPQGPQGPIGPIGEEGKRGPRGDPGS 513



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 3/113 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G +G +G KG  G  G  G +G PG +GP GP G  G++G+ GP+G +G PG +
Sbjct: 773 GTPGPKGDRGGMGEKGAEGTAGNDGARGLPGPIGPMGPAGSTGEKGEPGPRGLVGPPGSR 832

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           G PG  G+ GP G +G+ G  G DG+ G+ GEPG    PG+ G  G PG  GL
Sbjct: 833 GNPGSRGENGPTGAVGFAGPPGPDGQPGVKGEPGE---PGQKGDAGSPGPQGL 882



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 88/196 (44%), Gaps = 51/196 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-------- 164
           GL GP G +GE G  G  G KG +G+ G PG  G PG +G+ G+ G +GP+G        
Sbjct: 536 GLPGPKGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGGP 595

Query: 165 -DMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDG----- 209
            + G PGP      +G PG  G  GPKG  G PG+ G  G  G+PG+   PG DG     
Sbjct: 596 GEDGRPGPAGSIGIRGQPGSMGLSGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPS 655

Query: 210 -------IPGRNGMDGIPGK---------------------DGLPGKDGIPGTNGTNGEK 241
                  + G  G  G PG                       G+PG  G+ G  G  GE+
Sbjct: 656 GPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGVVGPLGPRGER 715

Query: 242 GMTGPRGNRGKSGING 257
           G  G RG  G SG+ G
Sbjct: 716 GNPGERGEPGASGLAG 731



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 82/180 (45%), Gaps = 48/180 (26%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG------EMGVKGERGEKGAPGVVGPPG 149
           +   +G      E  P G QGPIG  GE G +G       +G  G  GE+GAPG  G PG
Sbjct: 474 VPGFKGEAGPKGEPGPQGPQGPIGPIGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPG 533

Query: 150 PQGIPG---DEGKRGP---------KGDMGYPGPQGIPGD------------E------- 178
             G+PG    +G+RGP         +GD G PG  G+PG             E       
Sbjct: 534 SDGLPGPKGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLG 593

Query: 179 -----GKRGPKGDM---GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
                G+ GP G +   G PG +GL G  G  G+PG    PG  G  G+PG+ G PGKDG
Sbjct: 594 GPGEDGRPGPAGSIGIRGQPGSMGLSGPKGSSGDPGK---PGEAGNAGVPGQRGAPGKDG 650



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 73/154 (47%), Gaps = 24/154 (15%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----- 167
           G+ G  G  G +G +GE G  GERGE GA G+ G    +G+ G  G  GPKG  G     
Sbjct: 698 GVPGDPGVVGPLGPRGERGNPGERGEPGASGLAGE---KGMAGGHGPDGPKGSPGPSGTP 754

Query: 168 ----------YPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                      PG +GI   PG +G RG  G+ G  G  G DG  GLPG  G  G  G  
Sbjct: 755 GDPGPPGLQGMPGERGIAGTPGPKGDRGGMGEKGAEGTAGNDGARGLPGPIGPMGPAGST 814

Query: 215 GMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
           G  G PG  GL   PG  G PG+ G NG  G  G
Sbjct: 815 GEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVG 848



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 62/128 (48%), Gaps = 9/128 (7%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GE G PG  G PG    PG  G RG      +PG  G+PG +G RG KG  G  G IG  
Sbjct: 269 GEPGRPGQSGEPG---FPGSPGPRG------FPGAPGLPGLKGHRGLKGLDGPKGEIGAA 319

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  G  G  G  G  G  G  G+PG+ G  G  G PG  G +G  G  GP G  G +G  
Sbjct: 320 GAKGESGPTGAMGATGPLGPRGMPGERGRIGPQGAPGGRGQHGMPGKPGPMGPLGITGSP 379

Query: 257 GVPGTPAI 264
           G PG P +
Sbjct: 380 GFPGAPGM 387



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 69/142 (48%), Gaps = 15/142 (10%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD-------- 186
           ++G  G PGVVGP GP+G  G+ G+RG  G  G  G +G+ G  G  GPKG         
Sbjct: 696 DQGVPGDPGVVGPLGPRGERGNPGERGEPGASGLAGEKGMAGGHGPDGPKGSPGPSGTPG 755

Query: 187 -------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
                   G PG  G+ G  G  G+ G  G  G  G  G  G  GLPG  G  G  G+ G
Sbjct: 756 DPGPPGLQGMPGERGIAGTPGPKGDRGGMGEKGAEGTAGNDGARGLPGPIGPMGPAGSTG 815

Query: 240 EKGMTGPRGNRGKSGINGVPGT 261
           EKG  GPRG  G  G  G PG+
Sbjct: 816 EKGEPGPRGLVGPPGSRGNPGS 837



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 88/212 (41%), Gaps = 69/212 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKR-------- 160
           PG  G IG +G+ G+ G  G KG  G+ G PG  G    PG +G PG +G+         
Sbjct: 601 PGPAGSIGIRGQPGSMGLSGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGP 660

Query: 161 ----GPKGDMGYPGP---------------------QGIPGDEG---KRGPKGDMGYPGR 192
               G +G+ G PGP                     QG+PGD G     GP+G+ G PG 
Sbjct: 661 PGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGVVGPLGPRGERGNPGE 720

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG---------------------LPGKDGI 231
                     GEPG  G+ G  GM G  G DG                     +PG+ GI
Sbjct: 721 R---------GEPGASGLAGEKGMAGGHGPDGPKGSPGPSGTPGDPGPPGLQGMPGERGI 771

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            GT G  G++G  G +G  G +G +G  G P 
Sbjct: 772 AGTPGPKGDRGGMGEKGAEGTAGNDGARGLPG 803



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 59/154 (38%), Gaps = 57/154 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP---------------- 162
           G  G IG  G  G  GE+GE G  G+VGPPG +G PG  G+ GP                
Sbjct: 800 GLPGPIGPMGPAGSTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPPGPDGQP 859

Query: 163 -----------KGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIG-- 194
                      KGD G PGPQG+                G  G +GP G  G+PG  G  
Sbjct: 860 GVKGEPGEPGQKGDAGSPGPQGLAGSPGPPGPSGVPGLKGGRGTQGPPGATGFPGSAGRV 919

Query: 195 -------------LDGRDGLPGEPGLDGIPGRNG 215
                          G  G  G PGL G PG +G
Sbjct: 920 GPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHG 953



 Score = 39.3 bits (90), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 73/173 (42%), Gaps = 54/173 (31%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---------------GKRGPKGDMGY 168
             G +G +G+ G+RGE+G PG+   PGP G PG +               G+ G  G +G 
Sbjct: 991  TGQRGIVGMPGQRGERGMPGL---PGPAGTPGKQGPTGPPGDKGPPGPIGQSGATGPVGE 1047

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------------------ 204
             GP+         GP G+ G PGR G  G  G  GE                        
Sbjct: 1048 AGPE---------GPAGNDGTPGRDGAVGERGDRGEPGPAGLPGSPGGPGTPGPVGPPGD 1098

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G  G  G PG+    GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1099 AGQRGETGSRGPVGPPGRA---GKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1148


>gi|156120609|ref|NP_001095450.1| collagen alpha-1(XVII) chain [Bos taurus]
 gi|193806725|sp|A6QPB3.1|COHA1_BOVIN RecName: Full=Collagen alpha-1(XVII) chain; AltName: Full=180 kDa
           bullous pemphigoid antigen 2; AltName: Full=Bullous
           pemphigoid antigen 2; Contains: RecName: Full=120 kDa
           linear IgA disease antigen homolog
 gi|151554129|gb|AAI49237.1| COL17A1 protein [Bos taurus]
 gi|296472682|tpg|DAA14797.1| TPA: collagen alpha-1(XVII) chain [Bos taurus]
          Length = 1473

 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 86/191 (45%), Gaps = 47/191 (24%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           +G  G KG+MGV+G +G++G PG  G PGP G  G EG +G KG++G PG +G  G  G+
Sbjct: 572 RGSPGPKGDMGVQGPKGDRGFPGTPGIPGPLGHQGPEGPKGQKGNVGEPGMEGPMGQRGR 631

Query: 181 -----------------RGPKGDM------------------GYPGRIGLDGRDGLPG-- 203
                            +G +GD                   G  G  GL G  GLPG  
Sbjct: 632 EGPMGPRGEPGPPGFGEKGDRGDAGKPGIPGPPGVPGSVGPKGSIGPQGLRGEVGLPGIK 691

Query: 204 ----------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                       G  G  G  G+ G PG  GLPG  G PG  G  G  G  G +G RG+ 
Sbjct: 692 GDKGPMGPPGPKGDQGEKGPRGLTGEPGLKGLPGAVGEPGAKGAMGPAGPDGHQGPRGEQ 751

Query: 254 GINGVPGTPAI 264
           G+ G+PGT  +
Sbjct: 752 GLPGMPGTRGL 762



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 72/127 (56%), Gaps = 12/127 (9%)

Query: 116 GPIGQKGEIGAKG---------EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM 166
           GP G +GE+G  G           G KG++GEKG  G+ G PG +G+PG  G+ G KG M
Sbjct: 677 GPQGLRGEVGLPGIKGDKGPMGPPGPKGDQGEKGPRGLTGEPGLKGLPGAVGEPGAKGAM 736

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G  GP    G +G RG +G  G PG  GL G  G PG+PGL G  G  G+ G PG+ G+ 
Sbjct: 737 GPAGPD---GHQGPRGEQGLPGMPGTRGLPGPSGDPGKPGLTGPQGPQGIPGTPGRPGVK 793

Query: 227 GKDGIPG 233
           G+ G PG
Sbjct: 794 GEPGAPG 800



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/128 (48%), Positives = 74/128 (57%), Gaps = 6/128 (4%)

Query: 127 KGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP 183
           KG +G +G RGE G PG+    GP GP G  GD+G++GP+G  G PG +G+PG  G+ G 
Sbjct: 673 KGSIGPQGLRGEVGLPGIKGDKGPMGPPGPKGDQGEKGPRGLTGEPGLKGLPGAVGEPGA 732

Query: 184 KGDMGYP---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
           KG MG     G  G  G  GLPG PG  G+PG +G  G PG  G  G  GIPGT G  G 
Sbjct: 733 KGAMGPAGPDGHQGPRGEQGLPGMPGTRGLPGPSGDPGKPGLTGPQGPQGIPGTPGRPGV 792

Query: 241 KGMTGPRG 248
           KG  G  G
Sbjct: 793 KGEPGAPG 800



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 114/272 (41%), Gaps = 74/272 (27%)

Query: 58  VEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPG---L 114
           V+ V P L E + + E +     +N   VW   + ++ L+  Q   N      P G   +
Sbjct: 530 VQGVAPRLGEGLGKSELDD----YNLEDVW--QFMKVRLMTEQENGNLRGSPGPKGDMGV 583

Query: 115 QGPIGQK---GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------ 159
           QGP G +   G  G  G +G +G  G KG  G VG PG +G  G  G+            
Sbjct: 584 QGPKGDRGFPGTPGIPGPLGHQGPEGPKGQKGNVGEPGMEGPMGQRGREGPMGPRGEPGP 643

Query: 160 -----RGPKGDM------------------GYPGPQGIPGD------------------- 177
                +G +GD                   G  GPQG+ G+                   
Sbjct: 644 PGFGEKGDRGDAGKPGIPGPPGVPGSVGPKGSIGPQGLRGEVGLPGIKGDKGPMGPPGPK 703

Query: 178 --EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIP 232
             +G++GP+G  G PG  GL G  G PG  G  G  G +G  G  G+ GL   PG  G+P
Sbjct: 704 GDQGEKGPRGLTGEPGLKGLPGAVGEPGAKGAMGPAGPDGHQGPRGEQGLPGMPGTRGLP 763

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G +G  G+ G+TGP+G +   GI G PG P +
Sbjct: 764 GPSGDPGKPGLTGPQGPQ---GIPGTPGRPGV 792



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 12/96 (12%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G   +  E    G  GP G  G  G +GE G+ G  G +G PG  G PG  G+ G +
Sbjct: 719 GLKGLPGAVGEPGAKGAMGPAGPDGHQGPRGEQGLPGMPGTRGLPGPSGDPGKPGLTGPQ 778

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
                       GPQGIPG  G+ G KG+ G PG+I
Sbjct: 779 ------------GPQGIPGTPGRPGVKGEPGAPGKI 802


>gi|263810|gb|AAB24972.1| collagen alpha chain [Riftia pachyptila=tube worms, Peptide, 1027
           aa]
          Length = 1027

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 75/159 (47%), Positives = 89/159 (55%), Gaps = 6/159 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEG---KRGPKGD 165
           PG+ G  G  G++GA G  G  G+RG  G+PG  G PGPQG   +PG  G     G  G 
Sbjct: 276 PGVXGSSGPPGDVGAPGHAGEAGKRGSPGSPGPAGSPGPQGDRGLPGSRGLPGMTGASGA 335

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           MG PG +G  G+ G +GP GD G  G  G  G  GLPG PG DG PG++G  GI GKDG 
Sbjct: 336 MGIPGEKGPSGEPGAKGPTGDTGRQGNQGTPGIAGLPGNPGSDGRPGKDGRPGIRGKDGK 395

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G+ G  G  G  G +G  GP G RG+ G NG PG P  
Sbjct: 396 QGEQGPQGPQGLAGLQGRAGPPGARGEPGKNGAPGEPGA 434



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 87/184 (47%), Gaps = 36/184 (19%)

Query: 113 GLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-- 164
           GLQGP+G  G+ G  GE       G  G  GE GA G  G PGP G PG  G  G  G  
Sbjct: 196 GLQGPVGLSGQPGVAGENGHPGMPGNDGANGEPGASGESGLPGPSGFPGPRGMPGTAGSP 255

Query: 165 -------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                        + G PG    PG  G  GP GD+G PG  G  G+ G PG PG  G P
Sbjct: 256 GQAGAXGDGGPTGEQGRPG---APGVXGSSGPPGDVGAPGHAGEAGKRGSPGSPGPAGSP 312

Query: 212 GRNGMDGIPGKDGLPGKDG------IPGTNGTNGEKGMTGP------RGNRGKSGINGVP 259
           G  G  G+PG  GLPG  G      IPG  G +GE G  GP      +GN+G  GI G+P
Sbjct: 313 GPQGDRGLPGSRGLPGMTGASGAMGIPGEKGPSGEPGAKGPTGDTGRQGNQGTPGIAGLP 372

Query: 260 GTPA 263
           G P 
Sbjct: 373 GNPG 376



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 89/174 (51%), Gaps = 21/174 (12%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGV------------VGPPGPQGIPGDEGKRGPKGDMGY 168
           +G+ G +G+ G +GERGE G PG             +G PG +G PG  G+RGP G  G 
Sbjct: 582 RGKAGERGKDGERGERGENGLPGPSGLAASXGERGDMGSPGERGSPGPAGERGPAGSQGI 641

Query: 169 PGPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G  G PGD G  G  GD+G+P         G+ G  G  GL G+ GL G  G  G  G 
Sbjct: 642 QGQPGPPGDAGPAGTXGDIGFPGERGTRGATGKQGARGPRGLAGKRGLRGAGGSRGETGA 701

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
            G+ GLPG  G PG  G +G+ G +GP G  GK G+ G  G+P +   + +  S
Sbjct: 702 QGEIGLPGSPGQPGLPGPSGQPGPSGPAGTAGKQGVXGARGSPGLVGKQGDRGS 755



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 97/226 (42%), Gaps = 38/226 (16%)

Query: 38  RHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLV 97
           R  D ++G+  +N +P        P  L     ER          +P     A  R P  
Sbjct: 588 RGKDGERGERGENGLP-------GPSGLAASXGERGDMGSPGERGSPGP---AGERGP-A 636

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             QG      +  PPG  GP G  G+IG        GERG +GA G  G  GP+G+ G  
Sbjct: 637 GSQGIQG---QPGPPGDAGPAGTXGDIG------FPGERGTRGATGKQGARGPRGLAGKR 687

Query: 158 GKRGPKGDM------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
           G RG  G              G PG  G+PG  G+ GP G  G  G+ G+ G  G P   
Sbjct: 688 GLRGAGGSRGETGAQGEIGLPGSPGQPGLPGPSGQPGPSGPAGTAGKQGVXGARGSPGLV 747

Query: 203 ---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              G+ G DG PGR+G  G  G+DG PG  G  G  G  GE+GM G
Sbjct: 748 GKQGDRGSDGEPGRDGTXGERGEDGPPGVSGPTGAPGQQGERGMPG 793



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 73/143 (51%), Gaps = 9/143 (6%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +G         P GL G  G +G  G++GE G +GE G  G+PG  G PGP G PG  
Sbjct: 667 GTRGATGKQGARGPRGLAGKRGLRGAGGSRGETGAQGEIGLPGSPGQPGLPGPSGQPGPS 726

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  G  G  G  G +G PG  GK+G +G  G P      GRDG  GE G DG PG +G  
Sbjct: 727 GPAGTAGKQGVXGARGSPGLVGKQGDRGSDGEP------GRDGTXGERGEDGPPGVSGPT 780

Query: 218 GIPGKDGLPGKDGIPGTNGTNGE 240
           G PG+    G+ G+PG  G  GE
Sbjct: 781 GAPGQQ---GERGMPGMVGLRGE 800



 Score = 46.2 bits (108), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 83/168 (49%), Gaps = 21/168 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP GQ G  G  G  G +G  G +G+PG+VG  G +G  G+ G+ G  G+ G  GP
Sbjct: 714 PGLPGPSGQPGPSGPAGTAGKQGVXGARGSPGLVGKQGDRGSDGEPGRDGTXGERGEDGP 773

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---------------------GEPGLDGI 210
            G+ G  G  G +G+ G PG +GL G  G                       G  G  G 
Sbjct: 774 PGVSGPTGAPGQQGERGMPGMVGLRGETGPMGGQGMXGDGGPPGPSGDRGERGNAGPQGP 833

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G +G  G PG++G PGKDG+PG  G  GE+G  G  G  G  G+ G+
Sbjct: 834 TGPSGQAGAPGQEGAPGKDGLPGLAGRPGERGEPGVAGRAGSQGLAGL 881



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 3/86 (3%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G PG  G  G KGD G     GI G +G +GP G  G PG  G +G  G+PG  G +G P
Sbjct: 172 GSPGFPGTPGSKGDRGQ---SGIXGAQGLQGPVGLSGQPGVAGENGHPGMPGNDGANGEP 228

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGT 237
           G +G  G+PG  G PG  G+PGT G+
Sbjct: 229 GASGESGLPGPSGFPGPRGMPGTAGS 254


>gi|301604360|ref|XP_002931864.1| PREDICTED: collagen alpha-6(IV) chain-like [Xenopus (Silurana)
           tropicalis]
          Length = 1643

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 92/172 (53%), Gaps = 21/172 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G+ G  G+ G+ G+RG  G PG++G  G +G  G  G  GPKG  G+ G 
Sbjct: 732 PGEPGLPGINGDKGLPGDAGLSGQRGFDGRPGLMGAKGERGNSGFPGSPGPKGQPGFGGS 791

Query: 172 QGIPGDEGKRGPKGDMGYPGRIG---LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG- 227
            GI   +GK+GP GD+GYPG  G     G  G+PG+ G+ GI G  G  G PG  G PG 
Sbjct: 792 MGI---KGKQGPPGDIGYPGSPGCQGFPGNKGVPGDRGIPGIAGMKGRPGAPGDAGRPGE 848

Query: 228 -----------KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
                      ++G+PG  G  GEKG     G RG +G+ G+PG P +  YK
Sbjct: 849 LGLPGLPGTGGREGLPGFQGLKGEKGFP---GVRGFAGMPGIPGLPGVSGYK 897



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 87/176 (49%), Gaps = 24/176 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY 168
           PG  G  GQ+G  G  G MG KGERG  G PG  GP   PG  G  G +GK+GP GD+GY
Sbjct: 747 PGDAGLSGQRGFDGRPGLMGAKGERGNSGFPGSPGPKGQPGFGGSMGIKGKQGPPGDIGY 806

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------PGL 207
           PG  G  G  G +G  GD G PG  G+ GR G PG+                     PG 
Sbjct: 807 PGSPGCQGFPGNKGVPGDRGIPGIAGMKGRPGAPGDAGRPGELGLPGLPGTGGREGLPGF 866

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G  G  G+ G  G+PG  G+PG +G  G  G  G  G +G  GI GV G P 
Sbjct: 867 QGLKGEKGFPGVRGFAGMPGIPGLPGVSGYKGICGSPGQDGQKGNDGIKGVKGLPG 922



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 93/191 (48%), Gaps = 39/191 (20%)

Query: 112 PGLQGP--IGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQGIPGDEGKRGPKGDMG 167
           PGL+G    G  GE G  G +G KG RGE G PG+   G PGP+G+PGD G+ G  G  G
Sbjct: 558 PGLKGAPGTGGSGEKGYPGLLGPKGSRGETGPPGIGYPGSPGPRGLPGDPGQAGLPGQPG 617

Query: 168 YPGPQG------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------- 214
             GP G      I G+ G  G +G  G+PGR G  G  G+PG+ G DG  G+        
Sbjct: 618 LAGPPGTTLPCVIAGEPGPPGIRGTPGFPGRKGNMGFPGVPGQQGFDGAKGQPGNPGFGG 677

Query: 215 -----------------GMDGIPGKDGLPGKDGIPGTNGTNGEKG-----MTGPRGNRGK 252
                            G +G+PG +GLPGK GIPG+ G  G +G       G  G  G 
Sbjct: 678 IPGPPGFPGPRGEEGAPGFNGLPGSEGLPGKFGIPGSPGLKGLRGEVLGATPGAPGEPGL 737

Query: 253 SGINGVPGTPA 263
            GING  G P 
Sbjct: 738 PGINGDKGLPG 748



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 92/203 (45%), Gaps = 49/203 (24%)

Query: 104 NSTKEYCPPGLQ--GPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGIPG 155
            S  E  PPG+   G  G +G  G  G+ G+ G+ G  G PG      + G PGP GI G
Sbjct: 582 GSRGETGPPGIGYPGSPGPRGLPGDPGQAGLPGQPGLAGPPGTTLPCVIAGEPGPPGIRG 641

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---------------------------G 188
             G  G KG+MG+PG   +PG +G  G KG                             G
Sbjct: 642 TPGFPGRKGNMGFPG---VPGQQGFDGAKGQPGNPGFGGIPGPPGFPGPRGEEGAPGFNG 698

Query: 189 YPGRIGLDGRDGLPGEPGLDGI-----------PGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            PG  GL G+ G+PG PGL G+           PG  G+ GI G  GLPG  G+ G  G 
Sbjct: 699 LPGSEGLPGKFGIPGSPGLKGLRGEVLGATPGAPGEPGLPGINGDKGLPGDAGLSGQRGF 758

Query: 238 NGEKGMTGPRGNRGKSGINGVPG 260
           +G  G+ G +G RG SG  G PG
Sbjct: 759 DGRPGLMGAKGERGNSGFPGSPG 781



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 96/201 (47%), Gaps = 37/201 (18%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDE 157
           GF  S      PG  G +G KG+ G  G++G  G  G +G PG  G PG +GIP   G +
Sbjct: 775 GFPGSPGPKGQPGFGGSMGIKGKQGPPGDIGYPGSPGCQGFPGNKGVPGDRGIPGIAGMK 834

Query: 158 GKRGPKGDMGYPGP------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G+ G  GD G PG             +G+PG +G +G KG  G  G  G+ G  GLPG  
Sbjct: 835 GRPGAPGDAGRPGELGLPGLPGTGGREGLPGFQGLKGEKGFPGVRGFAGMPGIPGLPGVS 894

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPG----------------TNGTNGEK------GM 243
           G  GI G  G DG  G DG+ G  G+PG                + G  GE+      G 
Sbjct: 895 GYKGICGSPGQDGQKGNDGIKGVKGLPGDRGPPGAVMPPPPGLLSKGAQGEQGPSGPPGF 954

Query: 244 TGPRGNRGKSGINGVPGTPAI 264
           TGPRG++G  G+ G+PG P  
Sbjct: 955 TGPRGDKGFPGLPGIPGNPGF 975



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 77/161 (47%), Gaps = 26/161 (16%)

Query: 136 RGEKGAPGVVGPPGPQGIPGD---------EGKRGP--KGDMGYPGPQGIPGDEGKRGPK 184
           RGE+GAPG  G PG +G+PG          +G RG       G PG  G+PG  G +G  
Sbjct: 688 RGEEGAPGFNGLPGSEGLPGKFGIPGSPGLKGLRGEVLGATPGAPGEPGLPGINGDKGLP 747

Query: 185 GDMGYPGRIGLDGRDGL------------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           GD G  G+ G DGR GL            PG PG  G PG  G  GI GK G PG  G P
Sbjct: 748 GDAGLSGQRGFDGRPGLMGAKGERGNSGFPGSPGPKGQPGFGGSMGIKGKQGPPGDIGYP 807

Query: 233 GTNGTN---GEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G+ G     G KG+ G RG  G +G+ G PG P       E
Sbjct: 808 GSPGCQGFPGNKGVPGDRGIPGIAGMKGRPGAPGDAGRPGE 848



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 82/174 (47%), Gaps = 29/174 (16%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G  G +G  G  G  G  G KGAPG  G  G +G PG  G +G +G+ G PG 
Sbjct: 534 PGSVGPRGAFGAVGKPGRYGYPGLPGLKGAPGTGGS-GEKGYPGLLGPKGSRGETGPPG- 591

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL---------DGIPGRNGMDGIPGK 222
            G PG  G RG  GD   PG+ GL G+ GL G PG           G PG  G  G PG+
Sbjct: 592 IGYPGSPGPRGLPGD---PGQAGLPGQPGLAGPPGTTLPCVIAGEPGPPGIRGTPGFPGR 648

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGP---------------RGNRGKSGINGVPGT 261
            G  G  G+PG  G +G KG  G                RG  G  G NG+PG+
Sbjct: 649 KGNMGFPGVPGQQGFDGAKGQPGNPGFGGIPGPPGFPGPRGEEGAPGFNGLPGS 702



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 21/103 (20%)

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---- 204
           GP+G+ G +G+RG   D G+         +G+ GPKGD+G+ G  G DG DG PG     
Sbjct: 81  GPEGVAGQKGERG---DYGF---------QGEAGPKGDLGHRGVTGFDGNDGTPGHVGQA 128

Query: 205 -----PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                PGLDG  G  G  G PG +G PG+ G+PG  G  G+KG
Sbjct: 129 GHRGLPGLDGCNGTIGDSGFPGSNGFPGQSGLPGPIGPKGQKG 171



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 88/194 (45%), Gaps = 35/194 (18%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKG----------ERGEK-GAPGVVGPPGPQGIPGDEGKR 160
            PG  G  G+ G  G KGE G+ G          ERGE  G PG  G  G  GIPG  G R
Sbjct: 989  PGFPGAFGRPGFPGPKGEPGIIGFPGMPGPNVRERGETLGQPGRPGVKGETGIPGISGLR 1048

Query: 161  GPKGDMGYPGPQGIP------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  G  G  G  GI             G  G+ G  G  GY G  GL G  GLPG PG  
Sbjct: 1049 GFDGMPGDVGSIGISGNPGPKGPPGEFGRIGQPGNPGQQGYRGNPGLVGSSGLPGSPGSP 1108

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT-----------GPRGNRGK-SGIN 256
            G PG  G+ G PG  G+ G +G+ G+ G+ G  G++           GP+G RG  S I+
Sbjct: 1109 GYPGAPGLKGFPGSQGIGGLNGLAGSKGSPGTPGLSEAGRPGTPGFPGPKGERGSPSTIS 1168

Query: 257  GVPGTPAICAYKRE 270
            G PG P    +  E
Sbjct: 1169 GQPGFPGSKGFPGE 1182



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 93/240 (38%), Gaps = 64/240 (26%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPG----------PQGIPGDEGKRGPKGDMGY 168
            G +GE G  G  G  G RG+KG PG+ G PG           +G PGD G  G  G  G+
Sbjct: 941  GAQGEQGPSGPPGFTGPRGDKGFPGLPGIPGNPGFPGNPGRDKGFPGDPGFPGAFGRPGF 1000

Query: 169  PGPQGIPG--------------------DEGKRGPKGDMGYPGRIGLDGRDGLP------ 202
            PGP+G PG                      G+ G KG+ G PG  GL G DG+P      
Sbjct: 1001 PGPKGEPGIIGFPGMPGPNVRERGETLGQPGRPGVKGETGIPGISGLRGFDGMPGDVGSI 1060

Query: 203  ---------------------GEPGLDGI---PGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                                 G PG  G    PG  G  G+PG  G PG  G PG  G  
Sbjct: 1061 GISGNPGPKGPPGEFGRIGQPGNPGQQGYRGNPGLVGSSGLPGSPGSPGYPGAPGLKGFP 1120

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSS 298
            G +G+    G  G +G  G PGTP +    R      P  +  +   P TI G      S
Sbjct: 1121 GSQGIG---GLNGLAGSKGSPGTPGLSEAGRPGTPGFPGPK-GERGSPSTISGQPGFPGS 1176



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 85/199 (42%), Gaps = 48/199 (24%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG QG  G  G +G+ G  G  G  G  GAPG+ G PG QGI G  G  G KG  G PG 
Sbjct: 1084 PGQQGYRGNPGLVGSSGLPGSPGSPGYPGAPGLKGFPGSQGIGGLNGLAGSKGSPGTPGL 1143

Query: 171  -PQGIPGDEGKRGPKGDMGYP----GRIGLDGRDGLPGEPGLDG---------------- 209
               G PG  G  GPKG+ G P    G+ G  G  G PGE GL G                
Sbjct: 1144 SEAGRPGTPGFPGPKGERGSPSTISGQPGFPGSKGFPGERGLPGAVGLPGLPGPPGFSFP 1203

Query: 210  --IPGRNGMDGIPGKDGLPGKDGIP------------------GTNGTNGEKGMTGPRGN 249
              IPGR      PG  G PG+DG                    G  G +G  G+ G  G 
Sbjct: 1204 SAIPGR------PGDPGFPGRDGEAGLPGLPGPRGPPGPGSNQGDTGDSGYPGIPGRPGI 1257

Query: 250  RGKSGINGVPGTPAICAYK 268
            +G+ GI G PG+P     K
Sbjct: 1258 KGEPGIPGNPGSPGAPGLK 1276



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 82/207 (39%), Gaps = 42/207 (20%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQGI 153
            LV   G   S      PG  G  G  G  G  G  G+ G +G  G PG+   G PG  G 
Sbjct: 1095 LVGSSGLPGSPGSPGYPGAPGLKGFPGSQGIGGLNGLAGSKGSPGTPGLSEAGRPGTPGF 1154

Query: 154  PGDEGKRGP----KGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIG 194
            PG +G+RG      G  G+PG +G PG+ G  G               P    G PG  G
Sbjct: 1155 PGPKGERGSPSTISGQPGFPGSKGFPGERGLPGAVGLPGLPGPPGFSFPSAIPGRPGDPG 1214

Query: 195  LDGRDGLP---------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
              GRDG                       G+ G  GIPGR G+ G PG  G PG  G PG
Sbjct: 1215 FPGRDGEAGLPGLPGPRGPPGPGSNQGDTGDSGYPGIPGRPGIKGEPGIPGNPGSPGAPG 1274

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G+ G  G  G  G  G  G PG
Sbjct: 1275 LKGLRGDPGFIGSPGKEGSVGDPGFPG 1301



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 78/186 (41%), Gaps = 50/186 (26%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP------------QGIPGDE 178
            G +G +GEKG PGV G  G  GIPG  G  G KG  G PG             +G+PGD 
Sbjct: 865  GFQGLKGEKGFPGVRGFAGMPGIPGLPGVSGYKGICGSPGQDGQKGNDGIKGVKGLPGDR 924

Query: 179  ----------------------------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-- 208
                                        G  GP+GD G+PG  G+ G  G PG PG D  
Sbjct: 925  GPPGAVMPPPPGLLSKGAQGEQGPSGPPGFTGPRGDKGFPGLPGIPGNPGFPGNPGRDKG 984

Query: 209  -----GIPGRNGMDGIPGKDGLPGKDGIPGTNGTN-GEKGMTGPRGNRGKSGINGVPGTP 262
                 G PG  G  G PG  G PG  G PG  G N  E+G T   G  G+ G+ G  G P
Sbjct: 985  FPGDPGFPGAFGRPGFPGPKGEPGIIGFPGMPGPNVRERGET--LGQPGRPGVKGETGIP 1042

Query: 263  AICAYK 268
             I   +
Sbjct: 1043 GISGLR 1048



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 79/190 (41%), Gaps = 50/190 (26%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP----GVVGPPGPQ 151
            +  + G   S      PGL        E G  G  G  G +GE+G+P    G  G PG +
Sbjct: 1125 IGGLNGLAGSKGSPGTPGLS-------EAGRPGTPGFPGPKGERGSPSTISGQPGFPGSK 1177

Query: 152  GIPGDEGKRG---------------PKGDMGYPGPQGIPGDEGK---------------- 180
            G PG+ G  G               P    G PG  G PG +G+                
Sbjct: 1178 GFPGERGLPGAVGLPGLPGPPGFSFPSAIPGRPGDPGFPGRDGEAGLPGLPGPRGPPGPG 1237

Query: 181  --RGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---P 232
              +G  GD GY   PGR G+ G  G+PG PG  G PG  G+ G PG  G PGK+G    P
Sbjct: 1238 SNQGDTGDSGYPGIPGRPGIKGEPGIPGNPGSPGAPGLKGLRGDPGFIGSPGKEGSVGDP 1297

Query: 233  GTNGTNGEKG 242
            G  G  GE+G
Sbjct: 1298 GFPGLKGERG 1307



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 88/216 (40%), Gaps = 66/216 (30%)

Query: 0   ----------------------                                      
                                                                       
Sbjct: 410 PGEDGPSGEIAGHQTALGEPGL                                       431

Query: 0                                                               
                                                                       
Sbjct: 431                                                              431

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG----ERGE--KGAPGVVGPPGPQ-----          151
           PG+ G  G  G+IG KG  G  G    E G+  KG+PG  G PG +              
Sbjct: 432 PGVPGNRGPPGQIGPKGYKGADGDCACEGGDLSKGSPGSPGLPGQRGSPGF          482

Query: 152 ----GIPGDEGKR------------------GPKGDMGYP------GPQGIPGDEGKRGP 183
               GIPGD G+R                  GPKG+ G P      GP+G PG  G RG 
Sbjct: 483 SGLNGIPGDPGRRGSDGLPGPPGSPGLPWFPGPKGEKGDPVYSTGKGPRGDPGSVGPRGA 542

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G +G PGR G  G  GL G PG  G  G  G  G+ G  G  G+ G PG     G  G 
Sbjct: 543 FGAVGKPGRYGYPGLPGLKGAPGTGGS-GEKGYPGLLGPKGSRGETGPPGI----GYPGS 597

Query: 244 TGPRGNRGKSGINGVPGTPAICA 266
            GPRG  G  G  G+PG P +  
Sbjct: 598 PGPRGLPGDPGQAGLPGQPGLAG 620



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 94/237 (39%), Gaps = 70/237 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGA---------PGVVGPPGPQGIPGDEGKRG 161
           P G+ G  G++G+ G +GE G KG+ G +G          PG VG  G +G+PG +G  G
Sbjct: 82  PEGVAGQKGERGDYGFQGEAGPKGDLGHRGVTGFDGNDGTPGHVGQAGHRGLPGLDGCNG 141

Query: 162 PKGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLD-----------------GRDGL 201
             GD G+PG  G PG     G  GPKG  G P  I  D                 G  G 
Sbjct: 142 TIGDSGFPGSNGFPGQSGLPGPIGPKGQKGEPSFISSDIRGLKGPRGPPGPEGMSGTAGF 201

Query: 202 PGEP---------------------------------------GLDGIPGRNGMDGIPGK 222
           PG P                                       G+ G  G  G+ G  G+
Sbjct: 202 PGVPGNRGVGYYGENGDKGDVGPPGPPGPRASTGPVEFTESAKGIQGDKGDRGLPGFRGE 261

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL-LPNS 278
            G PG +G  G +G  GEKG+ G  G RG+ G+ G  G       K E  ++ LP +
Sbjct: 262 QGFPGLEGF-GFSGEKGEKGILGLPGPRGQPGLPGFDGLHGFTGMKGEQGNIGLPGT 317



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 100/226 (44%), Gaps = 53/226 (23%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
            +G+ G  G  G+ G  G KG PG+ G PG  G PG +G RG  G +G PG +G  GD G 
Sbjct: 1240 QGDTGDSGYPGIPGRPGIKGEPGIPGNPGSPGAPGLKGLRGDPGFIGSPGKEGSVGDPGF 1299

Query: 181  RGPKGD-------------------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
             G KG+                         +G PG  G++G DG+ GE G  G  G  G
Sbjct: 1300 PGLKGERGNPGLPGPQGRPGPPPSIEDYQIPIGLPGLPGINGFDGVLGEIGSPGPNGPPG 1359

Query: 216  MDGIPGKDGLPGKD---------------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G PG+ G  G++               GIPGT+G  G        G +G  G+ G+PG
Sbjct: 1360 AKGFPGRSGQMGRNGPPGAPGPIGDPGEIGIPGTSGLEGSP------GKQGAVGLPGMPG 1413

Query: 261  TPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREG 306
                  Y     +L+ +S++ Q  IPP  +G   ++    ++  EG
Sbjct: 1414 RSVGVGY-----TLVKHSQSEQ--IPPCPLGMARLWDGYSLLFVEG 1452



 Score = 40.0 bits (92), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 6/90 (6%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
             GP G  G+ G +G+ G +GE G KG  G       +G+ G +G  G  G +G  G +G
Sbjct: 79  FSGPEGVAGQKGERGDYGFQGEAGPKGDLGH------RGVTGFDGNDGTPGHVGQAGHRG 132

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
           +PG +G  G  GD G+PG  G  G+ GLPG
Sbjct: 133 LPGLDGCNGTIGDSGFPGSNGFPGQSGLPG 162


>gi|51338769|sp|P30754.2|CAFF_RIFPA RecName: Full=Fibril-forming collagen alpha chain
          Length = 1027

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 75/159 (47%), Positives = 90/159 (56%), Gaps = 6/159 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDE---GKRGPKGD 165
           PG++G  G  G++GA G  G  G+RG  G+PG  G PGPQ   G+PG     G  G  G 
Sbjct: 276 PGVKGSSGPPGDVGAPGHAGEAGKRGSPGSPGPAGSPGPQGDRGLPGSRGLPGMTGASGA 335

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           MG PG +G  G+ G +GP GD G  G  G  G  GLPG PG DG PG++G  GI GKDG 
Sbjct: 336 MGIPGEKGPSGEPGAKGPTGDTGRQGNQGTPGIAGLPGNPGSDGRPGKDGRPGIRGKDGK 395

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G+ G  G  G  G +G  GP G RG+ G NG PG P  
Sbjct: 396 QGEQGPQGPQGLAGLQGRAGPPGARGEPGKNGAPGEPGA 434



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/181 (44%), Positives = 93/181 (51%), Gaps = 30/181 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMG------------VKGERGEKGAPGVVGPPGPQGIPG---DE 157
           GLQGP+G  G+ G  GE G              G  GE G PG  G PGP+G+PG     
Sbjct: 196 GLQGPVGLSGQPGVAGENGHPGMPGMDGANGEPGASGESGLPGPSGFPGPRGMPGTAGSP 255

Query: 158 GKRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ G KGD G  G QG PG    +G  GP GD+G PG  G  G+ G PG PG  G PG  
Sbjct: 256 GQAGAKGDGGPTGEQGRPGAPGVKGSSGPPGDVGAPGHAGEAGKRGSPGSPGPAGSPGPQ 315

Query: 215 GMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGP------RGNRGKSGINGVPGTP 262
           G  G+PG  GLPG        GIPG  G +GE G  GP      +GN+G  GI G+PG P
Sbjct: 316 GDRGLPGSRGLPGMTGASGAMGIPGEKGPSGEPGAKGPTGDTGRQGNQGTPGIAGLPGNP 375

Query: 263 A 263
            
Sbjct: 376 G 376



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGV------------VGPPGPQGIPGDEGKRGPKGD 165
           IG +G+ G +G+ G +GERGE G PG             +G PG +G PG  G+RGP G 
Sbjct: 579 IGPRGKAGERGKDGERGERGENGLPGPSGLAASKGERGDMGSPGERGSPGPAGERGPAGS 638

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G  G PGD G  G KGD+G+P         G+ G  G  GL G+ GL G  G  G 
Sbjct: 639 QGIQGQPGPPGDAGPAGTKGDIGFPGERGTRGATGKQGARGPRGLAGKRGLRGAGGSRGE 698

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
            G  G+ GLPG  G PG  G +G+ G +GP G  GK G+ G  G+P +   + +  S
Sbjct: 699 TGAQGEIGLPGSPGQPGLPGPSGQPGPSGPAGTAGKQGVKGARGSPGLVGKQGDRGS 755



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 106/242 (43%), Gaps = 38/242 (15%)

Query: 28  SKHNVSNRFR---RHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNP 84
           S+ ++  R +   R  D ++G+  +N +P        P  L     ER          +P
Sbjct: 575 SRGDIGPRGKAGERGKDGERGERGENGLP-------GPSGLAASKGERGDMGSPGERGSP 627

Query: 85  WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIG---------------AKGE 129
                A  R P    QG      +  PPG  GP G KG+IG               A+G 
Sbjct: 628 GP---AGERGP-AGSQGIQG---QPGPPGDAGPAGTKGDIGFPGERGTRGATGKQGARGP 680

Query: 130 MGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
            G+ G+RG +GA G  G  G QG   +PG  G+ G  G  G PGP G  G  GK+G KG 
Sbjct: 681 RGLAGKRGLRGAGGSRGETGAQGEIGLPGSPGQPGLPGPSGQPGPSGPAGTAGKQGVKGA 740

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG +G  G  G  GEPG DG  G  G DG P   G+ G  G PG  G  G  GM G 
Sbjct: 741 RGSPGLVGKQGDRGSDGEPGRDGTKGERGEDGPP---GVSGPTGAPGQQGERGMPGMVGL 797

Query: 247 RG 248
           RG
Sbjct: 798 RG 799



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 86/169 (50%), Gaps = 23/169 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL GP GQ G  G  G  G +G +G +G+PG+VG  G +G  G+ G+ G KG+ G  GP
Sbjct: 714 PGLPGPSGQPGPSGPAGTAGKQGVKGARGSPGLVGKQGDRGSDGEPGRDGTKGERGEDGP 773

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP----------------------GEPGLDG 209
            G+ G  G  G +G+ G PG +GL G  G P                      G  G  G
Sbjct: 774 PGVSGPTGAPGQQGERGMPGMVGLRGETG-PMGGQGMKGDGGPPGPSGDRGERGNAGPQG 832

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
             G +G  G PG++G PGKDG+PG  G  GE+G  G  G  G  G+ G+
Sbjct: 833 PTGPSGQAGAPGQEGAPGKDGLPGLAGRPGERGEPGVAGRAGSQGLAGL 881



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 77/162 (47%), Gaps = 36/162 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-PK--GDMGY 168
           PGL G  G +G  G  G  G KGERGE G PGV    GP G PG +G+RG P   G  G 
Sbjct: 744 PGLVGKQGDRGSDGEPGRDGTKGERGEDGPPGVS---GPTGAPGQQGERGMPGMVGLRGE 800

Query: 169 PGP---------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP----- 202
            GP                     +G  G +G  GP G  G PG+ G  G+DGLP     
Sbjct: 801 TGPMGGQGMKGDGGPPGPSGDRGERGNAGPQGPTGPSGQAGAPGQEGAPGKDGLPGLAGR 860

Query: 203 ----GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
               GEPG+ G  G  G+ G+ G+ GLPG  G PG  G  GE
Sbjct: 861 PGERGEPGVAGRAGSQGLAGLMGQRGLPGAAGPPGDRGERGE 902



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 12/110 (10%)

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGLDGI---PGRN 214
           G  G+PG  G  GD G+ G KG  G  G +GL G+ G+      PG PG+DG    PG +
Sbjct: 172 GSPGFPGTPGSKGDRGQSGIKGAQGLQGPVGLSGQPGVAGENGHPGMPGMDGANGEPGAS 231

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G+PG  G PG  G+PGT G+ G+ G    +G+ G +G  G PG P +
Sbjct: 232 GESGLPGPSGFPGPRGMPGTAGSPGQAGA---KGDGGPTGEQGRPGAPGV 278



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 87/181 (48%), Gaps = 18/181 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             QGF         PG  G  G++G +GA G  G  G  GE+GAPG  G  GP+G+PG+ 
Sbjct: 469 GQQGFQGLAGAQGTPGEAGKTGERGAVGATGPSGPAGPGGERGAPGDRGNVGPRGMPGER 528

Query: 158 GKRGPKGDMGYPGPQ---------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
           G  GP G  G PG                 G+PG+   RGPKG  G  G  G  G  G  
Sbjct: 529 GATGPAGPTGSPGVAGAKGQGGPPGPAGLVGLPGE---RGPKGVGGSKGSRGDIGPRGKA 585

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE G DG  G  G +G+PG  GL    G  G  G+ GE+G  GP G RG +G  G+ G P
Sbjct: 586 GERGKDGERGERGENGLPGPSGLAASKGERGDMGSPGERGSPGPAGERGPAGSQGIQGQP 645

Query: 263 A 263
            
Sbjct: 646 G 646


>gi|380808422|gb|AFE76086.1| collagen alpha-1(IX) chain isoform 2 precursor [Macaca mulatta]
 gi|380809618|gb|AFE76684.1| collagen alpha-1(IX) chain isoform 2 precursor [Macaca mulatta]
 gi|384945332|gb|AFI36271.1| collagen alpha-1(IX) chain isoform 2 precursor [Macaca mulatta]
          Length = 678

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 107/195 (54%), Gaps = 36/195 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKG---------ERGEKG 140
           L  M+G   +  E   PG QG  G++G      E+GA+G  G +G         ++GEKG
Sbjct: 182 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 241

Query: 141 APGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPG 191
           A G+ G  GPQG+PG   D+G+RGP G+ G   P+G  G +G RG      PKGD G PG
Sbjct: 242 ARGLDGELGPQGLPGAPGDQGQRGPPGEAG---PKGERGAQGARGIPGLPGPKGDTGLPG 298

Query: 192 RIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
              +DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  G
Sbjct: 299 ---VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 246 PRGNRGKSGINGVPG 260
           P GN GK G  G PG
Sbjct: 356 PMGNSGKPGQQGPPG 370



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 80/174 (45%), Positives = 98/174 (56%), Gaps = 21/174 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 183 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 242

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G  GPQG+PG   D+G+RGP G+ G  G  G  G  G+PG      +PG  G  G+
Sbjct: 243 RGLDGELGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPG------LPGPKGDTGL 296

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
           PG DG   +DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  S
Sbjct: 297 PGVDG---RDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGS 347



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PGP G  G  G++GP G++G  GP+
Sbjct: 325 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGPMGNSGKPGQQGPPGEVGPRGPR 378

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PG+
Sbjct: 379 GLPGSRGELGPVGSPGLPGK 398



 Score = 42.7 bits (99), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 64/119 (53%), Gaps = 6/119 (5%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGL---PGEP 205
           G+PG  G +G KG++G PG QG  G+EG +G  G++G    PG  GL G  G+    GE 
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEK 240

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G  G+ G  G  G+PG  G  G+ G PG  G  GE+G  G RG  G  G  G  G P +
Sbjct: 241 GARGLDGELGPQGLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPGPKGDTGLPGV 299



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 39/146 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE------------------- 138
            + G      +  PPG  GP G++G  GA+G  G+ G +G+                   
Sbjct: 253 GLPGAPGDQGQRGPPGEAGPKGERGAQGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 312

Query: 139 --------------KGAPGVVGPPGPQGIPGDEG------KRGPKGDMGYPGPQGIPGDE 178
                         +G PGV G PG +G+ G++G      K GP G+ G PG QG PG+ 
Sbjct: 313 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEV 372

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGE 204
           G RGP+G  G  G +G  G  GLPG+
Sbjct: 373 GPRGPRGLPGSRGELGPVGSPGLPGK 398


>gi|109071783|ref|XP_001108025.1| PREDICTED: collagen alpha-1(XIX) chain-like [Macaca mulatta]
          Length = 1167

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 92/200 (46%), Gaps = 58/200 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  GP GQKGE    GE   KGE+G++G PG++G                       G 
Sbjct: 496 PGSVGPKGQKGE---PGEPFTKGEKGDRGEPGIIGSQGVKGEPGDPGPPGLIGSPGLKGQ 552

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK----------------GDMGYPGRIG 194
           QG  G  G RGP GD+G PG  GIPG +G +G K                G+ G PG+  
Sbjct: 553 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKS- 611

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGM 243
                 LPGEPGLDG PG  G  G  G+ GLPG             GIPG  G+ G  G 
Sbjct: 612 ------LPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPPGVGIPGRTGSQGPVGE 665

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            G +G RG  G+ G PGTP 
Sbjct: 666 PGIQGPRGLPGLPGTPGTPG 685



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 95/239 (39%), Gaps = 80/239 (33%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGD--- 165
           PGL G  G++G  G+KGE G KGE+GEKG PG+ G  G  G+ GD G RG   PKG+   
Sbjct: 347 PGLPGQKGEQGFEGSKGETGEKGEQGEKGDPGLAGLNGENGLKGDLGPRGLPGPKGEKGD 406

Query: 166 ------------MGYPGPQGIPGDEGKRGP------------------------------ 183
                       +G  GPQG PG EG+RG                               
Sbjct: 407 TGPPGPPVLPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLGG 466

Query: 184 -----------------KGDMG------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                            KGD G      +PG +G  G+ G PGEP   G  G  G  GI 
Sbjct: 467 YYNKDNKGNDEHEAGGLKGDKGENGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGII 526

Query: 221 GKDGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G+ G+          G PG  G  G  G  GPRG  G  G+ G  G P     K E
Sbjct: 527 GSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGE 585



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 82/197 (41%), Gaps = 64/197 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  G +G KG+ G  GE   KGE+G++G PG++G                       G 
Sbjct: 493 PGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGIIGSQGVKGEPGDPGPPGLIGSPGLKGQ 552

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK-------------------------- 184
           QG  G  G RGP GD+G PG  GIPG +G +G K                          
Sbjct: 553 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKSL 612

Query: 185 -------GDMGYPGRIGLDGRDGLPG---------EPGLDGIPGRNGMDGIPGKDGLPGK 228
                  G+ G PG  G  G  GLPG          PG+ GIPGR G  G  G+ G+ G 
Sbjct: 613 PGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPPGV-GIPGRTGSQGPVGEPGIQGP 671

Query: 229 DGIPGTNGTNGEKGMTG 245
            G+PG  GT G  G  G
Sbjct: 672 RGLPGLPGTPGTPGNDG 688



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 68/147 (46%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG----------------EK 139
           L   QG   S     PPG    +G  GE G  G+ G+KGE+G                E 
Sbjct: 549 LKGQQGSAGSMGPRGPPG---DVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEA 605

Query: 140 GAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD-----------EGKRGPKGD 186
           G PG  + G PG  G PG  G RGPKG+ G PG  G PGD            G +GP G+
Sbjct: 606 GPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPPGVGIPGRTGSQGPVGE 665

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG+PGR
Sbjct: 666 PGIQGPRGLPGLPGTPGTPGNDGVPGR 692



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 78/145 (53%), Gaps = 15/145 (10%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  G  G +G  GVKG+RG  G PG+ G       PGP G+PG+ G+RGP GD+G+PGP+
Sbjct: 885  GAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGPE 944

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                     GP G  G  G+ G+ G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 945  ---------GPSGKPGINGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGERGKP 995

Query: 233  GTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G  G  GP GN+G  G  G
Sbjct: 996  GLTGMKGAIGPIGPPGNKGSMGSPG 1020



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 78/168 (46%), Gaps = 33/168 (19%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A G  G KGE G  G PG VGP G +G PG+   +G KGD G PG  G  G +G+ G  G
Sbjct: 480 AGGLKGDKGENGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGIIGSQGVKGEPGDPG 539

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI-------------- 231
             G  G  GL G+ G  G  G  G PG  G+   PG+ G+PGK GI              
Sbjct: 540 PPGLIGSPGLKGQQGSAGSMGPRGPPGDVGL---PGEHGIPGKQGIKGEKGDPGGIIGPP 596

Query: 232 ----------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                           PG  G +G  G  GPRG +G+ G+ GV G+P 
Sbjct: 597 GLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPG 644



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 49/95 (51%), Gaps = 6/95 (6%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G PG    PG  G+   KGD G PG  GL G  GLPG+ G  G  G  G  G  G+
Sbjct: 317 KGEAGLPG---APGSPGQ---KGDKGEPGENGLHGAPGLPGQKGEQGFEGSKGETGEKGE 370

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G+ G NG NG KG  GPRG  G  G  G
Sbjct: 371 QGEKGDPGLAGLNGENGLKGDLGPRGLPGPKGEKG 405



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 65/125 (52%), Gaps = 24/125 (19%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KGE G  G  G  G++G+KG PG  G  G  G+PG       KG+ G+ G +G  G++G+
Sbjct: 317 KGEAGLPGAPGSPGQKGDKGEPGENGLHGAPGLPGQ------KGEQGFEGSKGETGEKGE 370

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---------------GIPGKDGL 225
           +G KGD   PG  GL+G +GL G+ G  G+PG  G                 GI G  G 
Sbjct: 371 QGEKGD---PGLAGLNGENGLKGDLGPRGLPGPKGEKGDTGPPGPPVLPGSLGIQGPQGP 427

Query: 226 PGKDG 230
           PGK+G
Sbjct: 428 PGKEG 432



 Score = 39.3 bits (90), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G++G+ G  G+ G +GERG+ G  G+ G  GP G PG+      KG MG PG 
Sbjct: 968  PGDRGPKGERGDQGIPGDRGPQGERGKPGLTGMKGAIGPIGPPGN------KGSMGSPGH 1021

Query: 172  Q 172
            Q
Sbjct: 1022 Q 1022


>gi|348585983|ref|XP_003478750.1| PREDICTED: collagen alpha-2(V) chain [Cavia porcellus]
          Length = 1499

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 90/165 (54%), Gaps = 15/165 (9%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G QGP G +G IG  GE   +G+RG +G PG VGP GP G  G  G RG  G  G
Sbjct: 478 EAGPKGEQGPHGVQGPIGPPGE---EGKRGPRGDPGTVGPQGPVGERGAPGNRGFPGSDG 534

Query: 168 YPGPQGIPGDEG---KRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            PGP+G  G+ G     GPKG  G PGR    GL G  GL G PG+ G  G+ G  G PG
Sbjct: 535 LPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPG 594

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
           +DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 595 EDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 92/175 (52%), Gaps = 16/175 (9%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G++G  G  G  G KGE G KGE+G  G  G +GPPG      +EGKRGP+GD G  G
Sbjct: 460 PQGIRGQPGDPGVPGFKGEAGPKGEQGPHGVQGPIGPPG------EEGKRGPRGDPGTVG 513

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           PQ   G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G
Sbjct: 514 PQ---GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPG 567

Query: 231 IPGTNGTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           +PG  G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 568 LPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 87/177 (49%), Gaps = 30/177 (16%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPG 149
           +   +G      E  P G+QGPIG  GE G +G       +G +G  GE+GAPG  G PG
Sbjct: 472 VPGFKGEAGPKGEQGPHGVQGPIGPPGEEGKRGPRGDPGTVGPQGPVGERGAPGNRGFPG 531

Query: 150 PQGIPGD---EGKRGP---------KGDMGYPGPQGIPG------------DEGKRGPKG 185
             G+PG    +G+RGP         +GD G PG  G+PG             EGK GP G
Sbjct: 532 SDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLG 591

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             G  GR G  G  G+ G+PG  G+PG  G  G PGK G  G  G+PG  G  G+ G
Sbjct: 592 APGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDG 648



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 84/207 (40%), Gaps = 54/207 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------- 147
            M+G    T    P G QG  G+ G  G  G  G+ G  G  G PG  GP          
Sbjct: 384 GMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSVGTSGPP 443

Query: 148 -----------------------PGPQGIPGDEGKRGPKGDMG---YPGPQGIPGDEGKR 181
                                  PG  G+PG +G+ GPKG+ G     GP G PG+EGKR
Sbjct: 444 GSIGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEQGPHGVQGPIGPPGEEGKR 503

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
           GP+GD                  PG  G  G  G  G PG  G PG DG+PG  G  GE+
Sbjct: 504 GPRGD------------------PGTVGPQGPVGERGAPGNRGFPGSDGLPGPKGAQGER 545

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYK 268
           G  G  G +G  G  G PG P +   +
Sbjct: 546 GPVGSSGPKGGQGDPGRPGEPGLPGAR 572



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 267 GEPGRNGNTGEVGFTGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPT 326

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 327 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSPGFPGNPGMK 386

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G  GP+G RG++G  G  G+
Sbjct: 387 GEAGPTGARGPEGPQGQRGETGPPGPAGS 415



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 91/189 (48%), Gaps = 30/189 (15%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGTPGPPGEGGKPGDQGV 697

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           PG+PG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+G+ G +G  G  G 
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGP 757

Query: 262 PAICAYKRE 270
           P +     E
Sbjct: 758 PGLQGMPGE 766



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124  IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
             G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 989  TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042

Query: 166  MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSTGAPGTPGPVGAPGDAGQRGD 1102

Query: 220  PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1146



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 91/173 (52%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 747 GPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 807 GPAGPAGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G  G  G+ G RG +G  G  G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPVGVPGLKGGRGTQGPPGATGFPGS 913



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 93/184 (50%), Gaps = 24/184 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 296 PGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355

Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGL------------------PGEPGL 207
            G  G+PG  G  GP    G  G+PG  G+ G  G                   PG  G 
Sbjct: 356 RGAHGMPGKPGPMGPLGIPGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGS 415

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            G+PG  G DG PG  G  G  G  G  G+ G  G  GP+G+ G  GI G PG P +  +
Sbjct: 416 QGLPGAMGTDGTPGAKGPTGSVGTSGPPGSIGPPGSPGPQGSTGPQGIRGQPGDPGVPGF 475

Query: 268 KRES 271
           K E+
Sbjct: 476 KGEA 479



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 79/176 (44%), Gaps = 30/176 (17%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------EGKRGPKGDM 166
           GP G  GE G  G  G  G+RG  G PG  GP GP GIPG          +G+ GP G  
Sbjct: 336 GPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSPGFPGNPGMKGEAGPTGAR 395

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP--------------- 211
           G  GPQG  G+ G  GP G  G PG +G DG  G  G  G  G                 
Sbjct: 396 GPEGPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSVGTSGPPGSIGPPGSPGPQ 455

Query: 212 ---GRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  G+ G PG  G+P   G+ G  G  G +G +G  GP G  GK G  G PGT
Sbjct: 456 GSTGPQGIRGQPGDPGVPGFKGEAGPKGEQGPHGVQGPIGPPGEEGKRGPRGDPGT 511



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 88/190 (46%), Gaps = 39/190 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  GQ G +G  G  G  G+ G+ G  G  G PG +G PG +G+           
Sbjct: 601 PPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 660

Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
             G +G+ G PGP                     QG+PGD G     GP+G+ G PG  G
Sbjct: 661 LAGERGEQGPPGPTGFQGLPGTPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERG 720

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
             G  GLPGE G+ G  G +G  G PG  G  G  G PG  G  GE+G+    GP+G+RG
Sbjct: 721 EPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRG 780

Query: 252 KSGINGVPGT 261
             G  G  GT
Sbjct: 781 GIGEKGAEGT 790



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGL 760

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPAGEKGEPGP 820

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 69/148 (46%), Gaps = 27/148 (18%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
           ++G  G PG VGP GP+G  G+ G+RG  G  G PG +G+ G  G  GPKG  G  G +G
Sbjct: 694 DQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVG 753

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG--------------- 239
                   G PGL G+PG  G+ G PG  G  G  G  G  GT G               
Sbjct: 754 DT------GPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPG 807

Query: 240 ------EKGMTGPRGNRGKSGINGVPGT 261
                 EKG  GPRG  G  G  G PG+
Sbjct: 808 PAGPAGEKGEPGPRGLVGPPGSRGNPGS 835



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 21/117 (17%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------G 173
           +KGE G +               G+VGPPG +G PG  G+ GP G +G+ GPQ      G
Sbjct: 814 EKGEPGPR---------------GLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPG 858

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           + G+ G+ G KGD G PG  GL G  G  G  G+ G+ G  G  G PG  G PG  G
Sbjct: 859 VKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPVGVPGLKGGRGTQGPPGATGFPGSAG 915



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 49/90 (54%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G +G++G+ G  G  G+ G  G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSTGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
            +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 1118 RGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1147



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 826 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 886 PHGPVGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRG 945

Query: 210 IPGRNG 215
            PG +G
Sbjct: 946 DPGSHG 951



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 64/140 (45%), Gaps = 39/140 (27%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG +GP G  G  G  G +G +G+RG+         PGP G+PG  G        G PGP
Sbjct: 1046 PGPEGPAGNDGTPGRDGAVGERGDRGD---------PGPAGLPGSTGA------PGTPGP 1090

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
             G PGD G+R   GD G  G IG  GR                      GK GLPG  G 
Sbjct: 1091 VGAPGDAGQR---GDPGSRGPIGPPGRA---------------------GKRGLPGPQGP 1126

Query: 232  PGTNGTNGEKGMTGPRGNRG 251
             G  G NG++G  G +G+RG
Sbjct: 1127 RGDKGDNGDRGDRGQKGHRG 1146



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 91/257 (35%), Gaps = 99/257 (38%)

Query: 100  QGFCNSTKEYCP---PGLQGPIGQKGEIGAKGEMGVKGERGEK------------GAPGV 144
            QG   S   + P   PGL+G  G +G  GA G  G  G  G              G PG 
Sbjct: 878  QGLAGSPGPHGPVGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGK 937

Query: 145  VGPPGPQGIPGDEGK--------------------------------------------- 159
             GPPG +G PG  G+                                             
Sbjct: 938  EGPPGLRGDPGSHGRVGDQGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGM 997

Query: 160  ---RGPKGDMGYPGPQGIP---------------------------GDEGKRGPKGDMGY 189
               RG +G  G PGP G P                           G+ G  GP G+ G 
Sbjct: 998  PGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGT 1057

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGT------NGE 240
            PGR G  G  G  G+PG  G+PG  G  G PG  G P   G+ G PG+ G        G+
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSTGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117

Query: 241  KGMTGPRGNRGKSGING 257
            +G+ GP+G RG  G NG
Sbjct: 1118 RGLPGPQGPRGDKGDNG 1134


>gi|444518524|gb|ELV12210.1| Collagen alpha-1(V) chain [Tupaia chinensis]
          Length = 1127

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 69/130 (53%), Gaps = 3/130 (2%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           +KGE G+ G  G  G  G +G+PG   + GPKGD G+ G  G+PG++G RG  G  G  G
Sbjct: 487 LKGEPGDMGPQGRAGSDGARGMPG---QTGPKGDRGFDGLAGLPGEKGHRGADGIRGLKG 543

Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
             G  G DG PG  G  GI G  G  G PG  G  G +G  G  G NG+ G  GP G +G
Sbjct: 544 TKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPTGEKG 603

Query: 252 KSGINGVPGT 261
             G  G PG 
Sbjct: 604 SLGFPGFPGA 613



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 85/199 (42%), Gaps = 72/199 (36%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG+MG+KG+RGE      +GPPGP+G      + GP+G  G  
Sbjct: 540 GLKGTKGEKGEDGFPGFKGDMGIKGDRGE------IGPPGPRG------EDGPEGPKGRG 587

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------GLPGEPGLDG----- 209
           GP G PG  G  G KG +G+PG  G +G                 G PG  G +G     
Sbjct: 588 GPNGDPGPLGPTGEKGSLGFPGFPGANGEKGGRGPRGERGPRGITGKPGPKGPNGAQGPT 647

Query: 210 -------------------------------------IPGRNGMDGIPGKDGLPGKDGIP 232
                                                + G+ G  G PG  GLPGKDG P
Sbjct: 648 GFPGPKGPPGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPP 707

Query: 233 GTNGTNGEKGMTGPRGNRG 251
           G  G  G++G+ GP G  G
Sbjct: 708 GLRGFPGDRGLPGPVGALG 726



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/152 (44%), Positives = 83/152 (54%), Gaps = 9/152 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  GP G+ G  GA+G  G  G +G++G  G+ G      +PG++G RG  G  G  G 
Sbjct: 491 PGDMGPQGRAGSDGARGMPGQTGPKGDRGFDGLAG------LPGEKGHRGADGIRGLKGT 544

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-- 229
           +G  G++G  G KGDMG  G  G  G  G  GE G +G  GR G +G PG  G  G+   
Sbjct: 545 KGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPTGEKGS 604

Query: 230 -GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG  G NGEKG  GPRG RG  GI G PG
Sbjct: 605 LGFPGFPGANGEKGGRGPRGERGPRGITGKPG 636



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 3/86 (3%)

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGT 237
           +G  GDMG  GR G DG  G+PG+ G  G  G +G+ G+PG+ G  G DGI    GT G 
Sbjct: 488 KGEPGDMGPQGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGADGIRGLKGTKGE 547

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPA 263
            GE G  G +G+ G  G  G  G P 
Sbjct: 548 KGEDGFPGFKGDMGIKGDRGEIGPPG 573



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 70/184 (38%), Gaps = 60/184 (32%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---------------PGPQ 172
           G+ G KG+ G  G PG  GPPG +G PGD G  GP G +G                 GPQ
Sbjct: 687 GKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGSEGPPGPPGPAGEKGPQ 746

Query: 173 GIPGDEGKRGP------------------KGDMGYPGRIGLDGRD--------------- 199
           G  G +G +GP                  KG++G PG  G  G                 
Sbjct: 747 GPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEVGEPGHKGSKGDKGEQGPVGFPGDPGPP 806

Query: 200 ------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                       GL G PG  G  G  G+ G  G  G  G+ G PG  G  G  G TGP+
Sbjct: 807 GEPGPAGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGPPGPKGAKGSSGPTGPK 866

Query: 248 GNRG 251
           G  G
Sbjct: 867 GEAG 870



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 68/178 (38%), Gaps = 63/178 (35%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------- 180
           G  G  G PGP G+P   GK GP G  G+PG +G+PG  G                    
Sbjct: 687 GKEGTKGDPGPAGLP---GKDGPPGLRGFPGDRGLPGPVGALGLKGSEGPPGPPGPAGEK 743

Query: 181 --RGPKGDMGYPGRIGL------------DGRDGLPGEPGLDGIPGRN------------ 214
             +GP G  G  G +GL            DG  G  GEPG  G  G              
Sbjct: 744 GPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEVGEPGHKGSKGDKGEQGPVGFPGDP 803

Query: 215 ---------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
                          G+ G PG+ G  G  G+PG  G++G KG  GP G +G  G +G
Sbjct: 804 GPPGEPGPAGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGPPGPKGAKGSSG 861


>gi|402888874|ref|XP_003907767.1| PREDICTED: collagen alpha-1(III) chain [Papio anubis]
          Length = 1466

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 80/175 (45%), Gaps = 45/175 (25%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG---------------------------IPGDE 157
           GAKGE+G  G  G  GAPG  G PGPQG                           IPG  
Sbjct: 348 GAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGSSGSPGGKGEMGPAGIPGAP 407

Query: 158 GK------------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
           G                   RG  G+ G  G +G PG  G+RG  G  G PG  G DG+D
Sbjct: 408 GLMGARGPPGPPGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKD 467

Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G PGEPG +G+PG  G  G PG  G  G +GIPG  G  GE+G  GP G RG +G
Sbjct: 468 GSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAG 522



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 60/109 (55%), Gaps = 18/109 (16%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGKRG 161
           L+G  G+ G+ GAKGE G +GERGE G PGV G             PG  G+PG  G+RG
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERG 486

Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G  G  GP GIPG+   +GP G+ G PG  G  G     GEPG DG+
Sbjct: 487 APGFRGPAGPNGIPGE---KGPAGERGAPGPAGPRG---AAGEPGRDGV 529



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 80/182 (43%), Gaps = 39/182 (21%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G+ G  G  G  GERG  G PG+ GP G  G PG +G RG  G  G  G  G PG +G+ 
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
           G  G+ G PG +G  G  G  G PGL G  G  G DG                      P
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
           G  G  G  G PG+NG  G++G  GP+G+                  +G+ G  G+PG P
Sbjct: 348 GAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGSSGSPGGKGEMGPAGIPGAP 407

Query: 263 AI 264
            +
Sbjct: 408 GL 409



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 90/224 (40%), Gaps = 78/224 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
           PGL+G  G  GE GA G MG +G  GE+G PG+   PG  G  G++G RG          
Sbjct: 281 PGLKGENGLPGENGAPGPMGPRGAPGERGRPGL---PGAAGARGNDGARGSDGQPGPPGP 337

Query: 164 ----------------GDMGYPGPQGIPGDEGKRGP---------------------KGD 186
                           G  G PG  G PG  G+ GP                     KG+
Sbjct: 338 PGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGSSGSPGGKGE 397

Query: 187 M---GYPGRIGL------------------------DGRDGLPGEPGLDGIPGRNGMDGI 219
           M   G PG  GL                         G++G  GEPG  G  G  G+ G+
Sbjct: 398 MGPAGIPGAPGLMGARGPPGPPGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGV 457

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
           PG  G  GKDG PG  G NG  G  G RG    RG +G NG+PG
Sbjct: 458 PGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPG 501



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 84/214 (39%), Gaps = 63/214 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG++GP G  G  G KG  G  G  GEKG  G  G  G  G+PG+ G  GP G  G PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306

Query: 171 PQGIPGDEGKRGPKGDMGYPG------------------RIGLDGRDGLPGEPGLDGIPG 212
            +G PG  G  G +G+ G  G                    G  G  G  G PG +G PG
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG 366

Query: 213 RNGMDGIPGK------------------------DGLPGKDGI----------------- 231
           + G  G  G                          G+PG  G+                 
Sbjct: 367 QRGEPGPQGHAGAQGPPGPPGSSGSPGGKGEMGPAGIPGAPGLMGARGPPGPPGANGAPG 426

Query: 232 ----PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                G  G NG KG  GPRG RG++GI GVPG 
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGA 460



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 12/84 (14%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +G  G+ G  G  G  G+ G  GE+GAPG  GP GP GIPG+   +GP G+ G PGP
Sbjct: 458 PGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGE---KGPAGERGAPGP 514

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGL 195
                     GP+G  G PGR G+
Sbjct: 515 A---------GPRGAAGEPGRDGV 529



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G PG PG  G+PG  G+ G  G  G PG  G  G +G NGEKG TG  G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286

Query: 253 SGI---NGVPG 260
           +G+   NG PG
Sbjct: 287 NGLPGENGAPG 297


>gi|194387934|dbj|BAG61380.1| unnamed protein product [Homo sapiens]
          Length = 589

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 97/213 (45%), Gaps = 63/213 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPGL+G  G +GE   +G+ G+ GE+GE G PG  G  GP G  G +G++G +G+ G  G
Sbjct: 258 PPGLRGDPGFEGE---RGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRG 314

Query: 171 PQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGL---------------------PG 203
           P+G  G++GKR      G KG+MGYPG  G  G  G                       G
Sbjct: 315 PKGYKGEKGKRGIDGVDGVKGEMGYPGLPGCKGSPGFDGIQGPPGPKGDPGAFGLKGEKG 374

Query: 204 EPGLDGIPGRNGMDG------------------IPGKDGLPGKDGI-------------- 231
           EPG DG  GR G  G                    G +G PG DG               
Sbjct: 375 EPGADGEAGRPGSSGPSGDEGQPGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGERGPRG 434

Query: 232 -PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            PGT G  G+ G  GP+G++G+ G  GVPG P 
Sbjct: 435 TPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPG 467



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 65/122 (53%), Gaps = 19/122 (15%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------- 200
           PG +G  GD G+ GP+GD G  GP G+PGD G+ GP G  GY G  G  G +G       
Sbjct: 436 PGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGSEGARGAPGP 495

Query: 201 --------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                   L GE G DG P  NG +G PG  G PG  G PG NGT   KG  G +G+ G+
Sbjct: 496 AGPPGDPGLMGERGEDG-PAGNGTEGFPGFPGYPGNRGAPGINGT---KGYPGLKGDEGE 551

Query: 253 SG 254
           +G
Sbjct: 552 AG 553



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 79/187 (42%), Gaps = 52/187 (27%)

Query: 119 GQKGEIGAKGEMGVKGERGEKG---------------APGVVGPPGPQGIPGDE------ 157
           G+KGE GA GE G  G  G  G                 G  G PGP G PG+       
Sbjct: 371 GEKGEPGADGEAGRPGSSGPSGDEGQPGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGER 430

Query: 158 ------GKRGPKGDMGYPGPQ---------GIPGDEGKRGPKGDMGYPGRIGLDGRD--- 199
                 G RGP+GD G  GPQ         G+PGD G+ GP G  GY G  G  G +   
Sbjct: 431 GPRGTPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGSEGAR 490

Query: 200 ------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                       GL GE G DG P  NG +G PG  G PG  G PG NGT G  G+ G  
Sbjct: 491 GAPGPAGPPGDPGLMGERGEDG-PAGNGTEGFPGFPGYPGNRGAPGINGTKGYPGLKGDE 549

Query: 248 GNRGKSG 254
           G  G  G
Sbjct: 550 GEAGDPG 556



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 68/130 (52%), Gaps = 13/130 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD 165
           PG +GP G  GE G +G+ G +G  G  G PG  GP GP+G       PG EG RG  G 
Sbjct: 436 PGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGSEGARGAPGP 495

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G PG  G+ G+ G+ GP G+       G +G  G PG PG  G PG NG  G PG  G 
Sbjct: 496 AGPPGDPGLMGERGEDGPAGN-------GTEGFPGFPGYPGNRGAPGINGTKGYPGLKGD 548

Query: 226 PGKDGIPGTN 235
            G+ G PG +
Sbjct: 549 EGEAGDPGDD 558


>gi|169658375|ref|NP_001106987.2| collagen alpha-1(II) chain isoform 2 precursor [Mus musculus]
 gi|30353888|gb|AAH52326.1| Col2a1 protein [Mus musculus]
          Length = 1419

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 80/198 (40%), Positives = 93/198 (46%), Gaps = 33/198 (16%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKG+ G  G++G+ GAPG  GP   PGP
Sbjct: 747 TGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGP 806

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKG---D 186
           QG  G  G +G +G  G PG  G PG  G                     K GPKG   D
Sbjct: 807 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDGPKGVRGD 866

Query: 187 MGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G PGR    GL G  G PGE G  G  G +G+DG PG  GL G+ GI G  G  GE+G 
Sbjct: 867 SGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGF 926

Query: 244 TGPRGNRGKSGINGVPGT 261
            G  G  G+ G  G PG 
Sbjct: 927 PGLPGPSGEPGKQGAPGA 944



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 88/189 (46%), Gaps = 39/189 (20%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 620 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPG 679

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G R               G KG++G
Sbjct: 680 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 739

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG  G  G  G PGE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G
Sbjct: 740 PPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 799

Query: 249 NRGKSGING 257
             G  G  G
Sbjct: 800 PSGAPGPQG 808



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 85/193 (44%), Gaps = 48/193 (24%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQ 172
           GP G  G  GA+G  G +GE G  G  G  GPPG  G PG   D+G+ G KGD G PGPQ
Sbjct: 739 GPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQ 798

Query: 173 G---IPGDEG------------KRGPKGDMGYPGRIGL---------------------- 195
           G    PG +G             +GP G  G+PG  G                       
Sbjct: 799 GPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKD 858

Query: 196 --------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                    G  G  G+PGL G  G  G  G PG DG  G DG PG  G  G++G+ G  
Sbjct: 859 GPKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLP 918

Query: 248 GNRGKSGINGVPG 260
           G RG+ G  G+PG
Sbjct: 919 GQRGERGFPGLPG 931



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 88/190 (46%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPK--------- 163
           GP+G KG+ G  G  G KG++G KG     GP GPQG P   G+EGKRG +         
Sbjct: 379 GPLGPKGQAGEPGIAGFKGDQGPKG---ETGPAGPQGAPGPAGEEGKRGARGEPGGAGPI 435

Query: 164 ---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMD 217
              G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ 
Sbjct: 436 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTGPKGANGDPGRPGEPGLPGARGLT 495

Query: 218 GIPG---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG                             G PG  G PG  G NGE G  G +G  
Sbjct: 496 GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLA 555

Query: 251 GKSGINGVPG 260
           G  G+ G+PG
Sbjct: 556 GAPGLRGLPG 565



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 87/209 (41%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGK------------- 159
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG +G              
Sbjct: 307 GEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 366

Query: 160 --------------------------------RGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                           +GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 367 GPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGEEGKRGAR 426

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 427 GEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTGPKGANGDPGR---P 483

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 484 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 512



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 682 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 735

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 736 GEVGPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQK---GDA 792

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 793 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 835



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 88/211 (41%), Gaps = 57/211 (27%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
           QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 783 QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGA 842

Query: 150 -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                            P+G+ GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 843 NGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGP 902

Query: 190 PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
           PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 903 PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 962

Query: 228 -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                ++G PG +G  G  G  G +G+RG++
Sbjct: 963 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 993



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 99/240 (41%), Gaps = 75/240 (31%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGE-- 138
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE  
Sbjct: 680 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 739

Query: 139 ----------KGAP---GVVGPPGPQGIP------------GDEGKRGPKGDMGYPGPQG 173
                     +GAP   G  GPPGP G              GD+G+ G KGD G PGPQG
Sbjct: 740 PPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 799

Query: 174 IPGDEGKRGP---------KGDMGYPGRIGLDG------------------------RDG 200
             G  G +GP         +G  G PG  G  G                        +DG
Sbjct: 800 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDG 859

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ GI G+PG
Sbjct: 860 PKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPG 919



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 95/213 (44%), Gaps = 45/213 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P GL GP G  G+ G  GE G+ G RG  G PG  GP   QG  G  
Sbjct: 454 GLAGPKGAPGERGPSGLTGPKGANGDPGRPGEPGLPGARGLTGRPGDAGP---QGKVGPS 510

Query: 158 GK---------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG-- 200
           G                RG  G MG+PGP+G  G+ GK G KG  G PG  GL G+DG  
Sbjct: 511 GAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGET 570

Query: 201 ----------LPGEPGLDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTN 238
                       GE G  G PG +G  G+PG              G+PG+ G PG  G  
Sbjct: 571 GAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPR 630

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYK 268
           GE+G  G RG+ G  G+    G+PGTP     K
Sbjct: 631 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPK 663



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 619 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPP 678

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 679 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 738

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 739 GPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEA 786



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 78/188 (41%), Gaps = 60/188 (31%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
            PGLQGP G  GE         KGE G+ G  G+ GPPGPQG+ G  G      +RG +G 
Sbjct: 876  PGLQGPAGAPGE---------KGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGF 926

Query: 166  MGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGI 210
             G PGP G PG +G  G  GD                G PGR G          PG DG 
Sbjct: 927  PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADGP 977

Query: 211  PGRNGMDGIPGKDG---------------------LPGKDGIPGTNGTNGEKGMTGPRGN 249
            PGR+G  G+ G  G                       GK G  G  G  G  G +GP G 
Sbjct: 978  PGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGA 1037

Query: 250  RGKSGING 257
            RG +G  G
Sbjct: 1038 RGIAGPQG 1045



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 75/192 (39%), Gaps = 60/192 (31%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G       +G PG+ G  GP G  G PG  GIPG +G       
Sbjct: 306 KGEAGPTGARGPEGAQGS------RGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 359

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GE    G  G PG  G 
Sbjct: 360 AGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGE 419

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGK 252
           +                     G PG  G PG+DG+ G  G  GE+   G+TGP+G  G 
Sbjct: 420 EGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTGPKGANGD 479

Query: 253 SGINGVPGTPAI 264
            G  G PG P  
Sbjct: 480 PGRPGEPGLPGA 491



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 90/226 (39%), Gaps = 84/226 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+             G +G+ 
Sbjct: 529 GQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQ 588

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QGIPG+ G  G   P+G+ G+PG        GL 
Sbjct: 589 GAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 648

Query: 197 GRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GKD 223
           G  GLPG PG D                     G+PG  G  GI             G +
Sbjct: 649 GPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 708

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 709 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGARGAPG 754



 Score = 42.7 bits (99), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 83/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 216 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 275

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +G +G+ G PG  G 
Sbjct: 276 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGP 335

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 336 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGI 392

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 393 AGFKGDQGPKGETGPAGPQGAPG-PAGEEGKR 423



 Score = 39.7 bits (91), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 54/114 (47%), Gaps = 24/114 (21%)

Query: 133 KGERGEKGAPGVVGPP---------------GPQGIPGDEGKR---GPKGDMGYPGPQGI 174
           +G  GE G PGV GP                G  G PG  G+R   GP+G  G+PG  G+
Sbjct: 156 QGNPGEPGEPGVSGPMGPRGPPGPAGKPGDDGEAGKPGKSGERGLPGPQGARGFPGTPGL 215

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           PG +G R      GYPG  G  G  G PG  G  G PG NG  G  G  GLPG+
Sbjct: 216 PGVKGHR------GYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGE 263


>gi|410900019|ref|XP_003963494.1| PREDICTED: collagen alpha-1(II) chain-like isoform 2 [Takifugu
           rubripes]
          Length = 1488

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 87/168 (51%), Gaps = 15/168 (8%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPKG 164
           E  P G  GP+G +G  G  GE G +G RGE GA G +GPPG +G PG+    G+ G  G
Sbjct: 467 ETGPKGELGPLGPQGAPGPAGEEGKRGARGEPGAAGPIGPPGERGAPGNRGFPGQDGLAG 526

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG------ 218
             G PG +G+PG  G +G  GD G PG  GL G  GL G PG  G  G+ G  G      
Sbjct: 527 GKGAPGDRGVPGAAGPKGTGGDPGRPGESGLPGARGLTGRPGDAGPQGKVGASGPAGDDG 586

Query: 219 ------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   G  G PG  G PG  G NGE G  G +G  G+ G+ G+PG
Sbjct: 587 RPGPPGPLGARGQPGVMGFPGPKGANGEPGKPGEKGLLGRQGLRGLPG 634



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/142 (46%), Positives = 83/142 (58%), Gaps = 12/142 (8%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPKGDMGYPGPQ 172
           G +G KG+ G  G  G+KGE G KG    +GP GPQG P   G+EGKRG +G+ G  GP 
Sbjct: 448 GSLGPKGQSGDPGLPGLKGETGPKG---ELGPLGPQGAPGPAGEEGKRGARGEPGAAGPI 504

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG+   RG  G+ G+PG+ GL G  G PG+ G+ G  G  G  G PG+   PG+ G+P
Sbjct: 505 GPPGE---RGAPGNRGFPGQDGLAGGKGAPGDRGVPGAAGPKGTGGDPGR---PGESGLP 558

Query: 233 GTNGTNGEKGMTGPRGNRGKSG 254
           G  G  G  G  GP+G  G SG
Sbjct: 559 GARGLTGRPGDAGPQGKVGASG 580



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 86/177 (48%), Gaps = 36/177 (20%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
            P G  GP G  G+ G KGE+G  G++G+ G+PG  GP   PGP G  G  G +G +G  G
Sbjct: 833  PAGFAGPPGADGQPGVKGELGESGQKGDSGSPGPQGPSGAPGPVGPTGVSGPKGARGAQG 892

Query: 168  YPGPQGIPGDEGK------------------------RGPKGDMGYPGRIGLDGRDGLPG 203
             PG  G PG  G+                        +G +GD G PGR          G
Sbjct: 893  APGSTGFPGSAGRVGPPGPNGNPGAAGPAGPAGKDGPKGTRGDAGPPGRH---------G 943

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            + GL G PG+ G  G PG+DG PG +G  G  G  G +G+ G  G RG+ G  G+PG
Sbjct: 944  DAGLRGPPGQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGIVGLPGQRGERGFPGLPG 1000



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 88/185 (47%), Gaps = 39/185 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKR-------- 160
           PG +G  G  G  GA+G+ G +GE G  G+PG  G    PG  GIPG +G          
Sbjct: 372 PGAKGEAGPTGNRGAEGQQGPRGEAGTPGSPGPAGASGNPGTDGIPGAKGSTGGPGIAGA 431

Query: 161 -------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMG------YPGRIGL 195
                              GPKG  G PG   +PG +G+ GPKG++G       PG  G 
Sbjct: 432 PGFPGPRGPPGPQGATGSLGPKGQSGDPG---LPGLKGETGPKGELGPLGPQGAPGPAGE 488

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +G+ G  GEPG  G  G  G  G PG  G PG+DG+ G  G  G++G+ G  G +G  G 
Sbjct: 489 EGKRGARGEPGAAGPIGPPGERGAPGNRGFPGQDGLAGGKGAPGDRGVPGAAGPKGTGGD 548

Query: 256 NGVPG 260
            G PG
Sbjct: 549 PGRPG 553



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 86/191 (45%), Gaps = 36/191 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------------ 147
           PG  GP G  G+ G  GE G+ G RG  G PG  GP                        
Sbjct: 537 PGAAGPKGTGGDPGRPGESGLPGARGLTGRPGDAGPQGKVGASGPAGDDGRPGPPGPLGA 596

Query: 148 ---------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                    PGP+G  G+ GK G KG +G  G +G+PG +G+ G  G  G  G +G  G 
Sbjct: 597 RGQPGVMGFPGPKGANGEPGKPGEKGLLGRQGLRGLPGKDGETGSAGPPGPAGPVGERGE 656

Query: 199 DGLPGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G PG  G  G+PG +G     G PG  GLPG+ G+PG  G  GE+G  G RG  G  G+
Sbjct: 657 QGQPGPSGFQGLPGPSGSPGEAGKPGDQGLPGEGGVPGAAGPRGERGFPGERGGAGPQGL 716

Query: 256 NGVPGTPAICA 266
            G  G P    
Sbjct: 717 QGPRGLPGTAG 727



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 79/166 (47%), Gaps = 24/166 (14%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG--------- 161
           PPGLQG  G++G  G  G  G +G+ GEK         GP+G PG +G RG         
Sbjct: 746 PPGLQGMPGERGAGGIPGAKGDRGDLGEK---------GPEGAPGKDGSRGLTGPIGPPG 796

Query: 162 ------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
                  KG+ G  GP G PG  G  G +G++G PG  G  G  G  G+PG+ G  G +G
Sbjct: 797 PSGPNGAKGESGPVGPNGAPGSRGTPGDRGEIGPPGPAGFAGPPGADGQPGVKGELGESG 856

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G  G  G PG  G  G  G  G RG +G  G  G PG+
Sbjct: 857 QKGDSGSPGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGSTGFPGS 902



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 92/208 (44%), Gaps = 57/208 (27%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYPGPQGI 174
           +G++GE G  G  G +G  G  G+PG  G PG QG+PG+    G  GP+G+ G+PG +G 
Sbjct: 651 VGERGEQGQPGPSGFQGLPGPSGSPGEAGKPGDQGLPGEGGVPGAAGPRGERGFPGERGG 710

Query: 175 PGDEGKRGPKGDMGYPGRIGLDG---------RDGLPGEPGLDGIPGRNGMDGIPGK--- 222
            G +G +GP+   G PG  G DG           G  G PGL G+PG  G  GIPG    
Sbjct: 711 AGPQGLQGPR---GLPGTAGSDGPKGAIGPAGAAGPQGPPGLQGMPGERGAGGIPGAKGD 767

Query: 223 ---------DGLPGKD------------------------------GIPGTNGTNGEKGM 243
                    +G PGKD                              G PG+ GT G++G 
Sbjct: 768 RGDLGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGAKGESGPVGPNGAPGSRGTPGDRGE 827

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRES 271
            GP G  G +G  G  G P +     ES
Sbjct: 828 IGPPGPAGFAGPPGADGQPGVKGELGES 855



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 74/149 (49%), Gaps = 15/149 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IPGD 156
            PG QGP G  G +G  G  G KG RG +GAPG  G PG  G                 G 
Sbjct: 864  PGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGSTGFPGSAGRVGPPGPNGNPGAAGPAGP 923

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             GK GPKG  G  GP G  GD G RGP G  G  G  G DG  G  G  G  G+ G  G+
Sbjct: 924  AGKDGPKGTRGDAGPPGRHGDAGLRGPPGQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGI 983

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G+PG+ G  G  G+PG +G  G++G +G
Sbjct: 984  VGLPGQRGERGFPGLPGPSGEPGKQGASG 1012



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 83/185 (44%), Gaps = 39/185 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---------GIPGDEGKRGPK 163
           G  GP G  GE G  GE G+ G +G +G PG  G  G           G  G++G+ GP 
Sbjct: 604 GFPGPKGANGEPGKPGEKGLLGRQGLRGLPGKDGETGSAGPPGPAGPVGERGEQGQPGPS 663

Query: 164 GDMGYPGPQGIPGDEGK---------------RGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  G PGP G PG+ GK                GP+G+ G+PG  G  G  GL G  GL 
Sbjct: 664 GFQGLPGPSGSPGEAGKPGDQGLPGEGGVPGAAGPRGERGFPGERGGAGPQGLQGPRGLP 723

Query: 209 GIPGRNG------------MDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G +G              G PG  G+PG+    GIPG  G  G+ G  GP G  GK 
Sbjct: 724 GTAGSDGPKGAIGPAGAAGPQGPPGLQGMPGERGAGGIPGAKGDRGDLGEKGPEGAPGKD 783

Query: 254 GINGV 258
           G  G+
Sbjct: 784 GSRGL 788



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 88/208 (42%), Gaps = 45/208 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   S  E   PG QG  G+ G  GA G  G +G  GE+G  G  G  GP+G+PG  
Sbjct: 667 GLPGPSGSPGEAGKPGDQGLPGEGGVPGAAGPRGERGFPGERGGAGPQGLQGPRGLPGTA 726

Query: 158 GKRGPK---------GDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLP 202
           G  GPK         G  G PG QG+PG+       G +G +GD+G  G  G  G+DG  
Sbjct: 727 GSDGPKGAIGPAGAAGPQGPPGLQGMPGERGAGGIPGAKGDRGDLGEKGPEGAPGKDGSR 786

Query: 203 ---------------------------GEPGLDGIPGRNGMDGIPGKDGL---PGKDGIP 232
                                      G PG  G PG  G  G PG  G    PG DG P
Sbjct: 787 GLTGPIGPPGPSGPNGAKGESGPVGPNGAPGSRGTPGDRGEIGPPGPAGFAGPPGADGQP 846

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  GE G  G  G+ G  G +G PG
Sbjct: 847 GVKGELGESGQKGDSGSPGPQGPSGAPG 874



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 64/151 (42%), Gaps = 39/151 (25%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GP G +G+ G  G  G  G RG  G  G  G PG  G PG EG  GP+G  G  G  G+P
Sbjct: 928  GPKGTRGDAGPPGRHGDAGLRGPPGQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGIVGLP 987

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------- 219
            G  G+R                  G PG PG  G PG+ G  G                 
Sbjct: 988  GQRGER------------------GFPGLPGPSGEPGKQGASGSAGDRGPPGPVGPPGLT 1029

Query: 220  -----PGKDGLPGKDGIPGTNGTNGEKGMTG 245
                 PG++G PG DG PG +G +G KG  G
Sbjct: 1030 GPAGDPGREGAPGSDGPPGRDGASGVKGERG 1060



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 81/198 (40%), Gaps = 51/198 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------GPQGIPGDE------G 158
            P G +G  G  G  G  G  G  G++GEKG PG  GPP      GPQG+ G        G
Sbjct: 929  PKGTRGDAGPPGRHGDAGLRGPPGQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGIVGLPG 988

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDGLPG 203
            +RG +G  G PGP G PG +G  G                 G  G PGR G  G DG PG
Sbjct: 989  QRGERGFPGLPGPSGEPGKQGASGSAGDRGPPGPVGPPGLTGPAGDPGREGAPGSDGPPG 1048

Query: 204  EPGLDGIPGRN------------------------GMDGIPGKDGLPGKDGIPGTNGTNG 239
              G  G+ G                          G  G  G+ G  G  G PG  G  G
Sbjct: 1049 RDGASGVKGERGNSGPAGAPGAPGAPGAPGSVGPLGKQGDRGEAGAQGPAGPPGLAGARG 1108

Query: 240  EKGMTGPRGNRGKSGING 257
              G  GPRG++G++G  G
Sbjct: 1109 MAGPQGPRGDKGEAGEAG 1126



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 80/216 (37%), Gaps = 75/216 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PGL G  G+ G  GAKGE G  GE G        GP GP+G+PG+ G+            
Sbjct: 294 PGLDGAKGESGAAGAKGETGSAGENG------APGPMGPRGLPGERGRPGAAGAAGARGN 347

Query: 161 ----------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                                 G  G  G  GP G  G EG++GP+G+ G PG  G  G 
Sbjct: 348 DGLPGPAGPPGPVGPAGAPGFPGSPGAKGEAGPTGNRGAEGQQGPRGEAGTPGSPGPAGA 407

Query: 199 DGLPGEPGLDGIPGR---------------------------------NGMDGIPGKDGL 225
               G PG DGIPG                                   G  G PG  GL
Sbjct: 408 S---GNPGTDGIPGAKGSTGGPGIAGAPGFPGPRGPPGPQGATGSLGPKGQSGDPGLPGL 464

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+ G  G  G  G +G  GP G  GK G  G PG 
Sbjct: 465 KGETGPKGELGPLGPQGAPGPAGEEGKRGARGEPGA 500



 Score = 47.4 bits (111), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 82/196 (41%), Gaps = 48/196 (24%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
              QG      E  PPG +GP G +G  G++G +G+ G+RGE+G PG+   PGP G PG +
Sbjct: 952  GQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGIVGLPGQRGERGFPGL---PGPSGEPGKQ 1008

Query: 158  GKRGPK---------------------GDMGYPGPQGIPGDEGKRGPKGDMG-------- 188
            G  G                       G  G PG  G PG +G  G KG+ G        
Sbjct: 1009 GASGSAGDRGPPGPVGPPGLTGPAGDPGREGAPGSDGPPGRDGASGVKGERGNSGPAGAP 1068

Query: 189  -------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                    PG +G  G+ G  GE          G  G  G  GL G  G+ G  G  G+K
Sbjct: 1069 GAPGAPGAPGSVGPLGKQGDRGE---------AGAQGPAGPPGLAGARGMAGPQGPRGDK 1119

Query: 242  GMTGPRGNRGKSGING 257
            G  G  G RG+ G  G
Sbjct: 1120 GEAGEAGERGQKGHRG 1135



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 56/104 (53%), Gaps = 3/104 (2%)

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGL 195
           +GAPG  G PGP G  G  G  GP G  G  G  G PG  G+R   GP+G  G+PG  GL
Sbjct: 225 QGAPGEAGEPGPAGPMGPRGPAGPPGKAGSDGEAGKPGKAGERGPAGPQGARGFPGTPGL 284

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            G  G  G PGLDG  G +G  G  G+ G  G++G PG  G  G
Sbjct: 285 PGIKGHRGHPGLDGAKGESGAAGAKGETGSAGENGAPGPMGPRG 328


>gi|351710670|gb|EHB13589.1| Collagen alpha-1(II) chain [Heterocephalus glaber]
          Length = 1488

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 93/198 (46%), Gaps = 33/198 (16%)

Query: 97   VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
               +G      E  PPG     GP G  G+ GAKGE G  G++G+ G+PG  GP   PGP
Sbjct: 816  AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGSPGPQGPSGAPGP 875

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
            QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 876  QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 935

Query: 187  MGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G PGR    GL G  G PGE G  G  G +G DG PG  GL G+ GI G  G  GE+G 
Sbjct: 936  GGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 995

Query: 244  TGPRGNRGKSGINGVPGT 261
             G  G  G+ G  G PG+
Sbjct: 996  PGLPGPSGEPGKQGAPGS 1013



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 90/187 (48%), Gaps = 39/187 (20%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPG---DEGKRGPKGDM 166
           G +G +G  G  G+ G  G  GERGE G PG     GPPG  G PG   ++G+ G KGD 
Sbjct: 802 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 861

Query: 167 GYPGPQG---IPGDE------------GKRGPKGDMGYPGRIG----------------- 194
           G PGPQG    PG +            G +GP G  G+PG  G                 
Sbjct: 862 GSPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 921

Query: 195 -LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
              G+DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ 
Sbjct: 922 GPSGKDGPKGARGDGGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQR 981

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 982 GIVGLPG 988



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 88/190 (46%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPK--------- 163
           GP+G KG+ G  G  G KGE+G KG     GP GPQG P   G+EGKRG +         
Sbjct: 448 GPLGPKGQAGEPGIAGFKGEQGPKG---ETGPAGPQGAPGPAGEEGKRGARGEPGGAGPI 504

Query: 164 ---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMD 217
              G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ 
Sbjct: 505 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLT 564

Query: 218 GIPG---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG                             G PG  G PG  G NGE G  G +G  
Sbjct: 565 GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLA 624

Query: 251 GKSGINGVPG 260
           G  G+ G+PG
Sbjct: 625 GAPGLRGLPG 634



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 87/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 689 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 748

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 749 LQGMPGERGAAGITGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 808

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 809 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 859

Query: 246 PRGNRGKSGINGVPG 260
             G+ G  G +G PG
Sbjct: 860 DAGSPGPQGPSGAPG 874



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 376 GEAGPTGARGPEGGQGPRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 435

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 436 GPRGPPGPQGATGPLGPKGQAGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGAR 495

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 496 GEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 552

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 553 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 581



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 72/158 (45%), Gaps = 21/158 (13%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 751 GMPGERGAAGITGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 804

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G  G  G  
Sbjct: 805 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGSP 864

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G PG  G  G  G  G RG +G  G  G PG 
Sbjct: 865 GPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGA 902



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 715 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGITGP---------- 764

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 765 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 822

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 823 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGSPGPQGPSGAPGPQG 877



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 80/216 (37%), Positives = 96/216 (44%), Gaps = 45/216 (20%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P GL GP G  G+ G  GE G+ G RG  G PG  GP   QG  G  
Sbjct: 523 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGP---QGKVGPS 579

Query: 158 GK---------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG-- 200
           G                RG  G MG+PGP+G  G+ GK G KG  G PG  GL G+DG  
Sbjct: 580 GAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGET 639

Query: 201 ----------LPGEPGLDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTN 238
                       GE G  G PG +G  G+PG              G+PG+ G PG  G  
Sbjct: 640 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGAPGEGGKPGDQGVPGEAGAPGLVGPR 699

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 700 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 735



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 85/209 (40%), Gaps = 57/209 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 852  QGEAGQKGDAGSPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 911

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                             P+G  GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 912  NGNPGPPGPPGPSGKDGPKGARGDGGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGP 971

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 972  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSSGDRGPPGPVGPPGLTGP 1031

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRG 251
                 ++G PG +G  G  G  G +G+RG
Sbjct: 1032 AGEPGREGSPGADGPPGRDGAAGVKGDRG 1060



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 87/207 (42%), Gaps = 39/207 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 749 LQGMPGERGAAGITGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 808

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGRIG 194
            PG  G  G +G PG+ G+ GP G  G+ GP G        G++G+ G KGD G PG  G
Sbjct: 809 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGSPGPQG 868

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------------------IPGTNG 236
             G  G  G  G+ G  G  G  G PG  G PG  G                    G +G
Sbjct: 869 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDG 928

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G +G  GP G  G  G+ G  G P 
Sbjct: 929 PKGARGDGGPPGRAGDPGLQGPAGPPG 955



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 75/187 (40%), Gaps = 51/187 (27%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----------- 181
           KGE G  GA G  G  GP+G PG+ G  GP G  G PG  GIPG +G             
Sbjct: 375 KGEAGPTGARGPEGGQGPRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGF 434

Query: 182 ----------------GPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMD----- 217
                           GPKG  G PG  G  G  G  GE    G  G PG  G +     
Sbjct: 435 PGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGA 494

Query: 218 ----------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                           G PG  G PG+DG+ G  G  GE+G +G  G +G +G  G PG 
Sbjct: 495 RGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGE 554

Query: 262 PAICAYK 268
           P +   +
Sbjct: 555 PGLPGAR 561



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 91/220 (41%), Gaps = 72/220 (32%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------------------------ERGEKGAPGVV 145
           G  GP G  GE G  GE G+ G                           ERGE+GAPG  
Sbjct: 604 GFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPS 663

Query: 146 G---------------PPGPQGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           G                PG QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  
Sbjct: 664 GFQGLPGPPGAPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLP 723

Query: 188 GYPGRIGLDGR---------------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKD 229
           G PG  G  G                 G+PGE G  GI G  G     G  G +G PGKD
Sbjct: 724 GTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGITGPKGDRGDVGEKGPEGAPGKD 783

Query: 230 GIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G           G NGEKG  GP G  G +G  G PG
Sbjct: 784 GGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 823



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 82/208 (39%), Gaps = 69/208 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
            PGLQGP G  GE         KGE G+ G  G  GPPGPQG+ G  G      +RG +G 
Sbjct: 945  PGLQGPAGPPGE---------KGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 995

Query: 166  MGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
             G PGP G PG +G  G                 G  G PGR G          PG DG 
Sbjct: 996  PGLPGPSGEPGKQGAPGSSGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADGP 1046

Query: 211  PGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTNGE 240
            PGR+G  G+                               G  G  G  G  G  G  G 
Sbjct: 1047 PGRDGAAGVKGDRGDTGAVGGPGAPGPPGSPGPSGPTGKQGDRGEAGAQGPMGPAGPAGA 1106

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +G+ GP+G RG  G +G PG   +  ++
Sbjct: 1107 RGIPGPQGPRGDKGESGEPGERGVKGHR 1134



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 285 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 344

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 345 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGGQGPRGEPGNPGSPGP 404

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 405 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGI 461

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 462 AGFKGEQGPKGETGPAGPQGAPG-PAGEEGKR 492



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 46/95 (48%), Gaps = 18/95 (18%)

Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
           GE G+ G  G  GPPGPQG              G+PG  G+PG +G R      GYPG  
Sbjct: 256 GEAGKPGKSGERGPPGPQGA------------RGFPGTPGLPGVKGHR------GYPGLD 297

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           G  G  G PG  G  G PG NG  G  G  GLPG+
Sbjct: 298 GAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGE 332



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 43/85 (50%), Gaps = 12/85 (14%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ GK G  G+ G PGPQG              G+PG  GL G  G  G PGLDG  G  
Sbjct: 256 GEAGKPGKSGERGPPGPQGA------------RGFPGTPGLPGVKGHRGYPGLDGAKGEA 303

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNG 239
           G  G+ G+ G PG++G PG  G  G
Sbjct: 304 GAPGVKGESGSPGENGSPGPMGPRG 328



 Score = 40.0 bits (92), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 27/95 (28%)

Query: 112  PGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGVVGP 147
            PG  GP G+ G  G KG+ G                         +G+RGE GA G +GP
Sbjct: 1041 PGADGPPGRDGAAGVKGDRGDTGAVGGPGAPGPPGSPGPSGPTGKQGDRGEAGAQGPMGP 1100

Query: 148  PGP---QGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
             GP   +GIPG +G RG KG+ G PG +G+ G  G
Sbjct: 1101 AGPAGARGIPGPQGPRGDKGESGEPGERGVKGHRG 1135


>gi|49117309|gb|AAH72650.1| Col4a1 protein [Mus musculus]
          Length = 1562

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 105/202 (51%), Gaps = 34/202 (16%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQG-- 152
            V   G   S  E   PG+    G +G  G+ GE G KGE+G+ G PG+   G PG +G  
Sbjct: 1013 VGGMGLPGSPGEKGVPGI---PGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQ 1069

Query: 153  ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                 PG  G++G KG  G PG   +PG  G RG  G++G+PG  GL G  G  G PGLD
Sbjct: 1070 GLAGFPGSPGEKGEKGSAGTPG---MPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLD 1126

Query: 209  GIPGRNGMDGIPG---------KDGLPGKDGIPGTNGTNGEKGMTG---P--------RG 248
            G+PG  G  G+PG         + G PG DGIPG+ G  GE+G+ G   P        +G
Sbjct: 1127 GVPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFPGFPGSKGDKG 1186

Query: 249  NRGKSGINGVPGTPAICAYKRE 270
            ++G+ G  G+ G+P I   K E
Sbjct: 1187 SKGEVGFPGLAGSPGIPGVKGE 1208



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 86/154 (55%), Gaps = 13/154 (8%)

Query: 119  GQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GQKG+ G KG++G    KG RG+ G PGV   PG  G  G  G+ GPKGD G  G  G P
Sbjct: 948  GQKGDQGEKGQIGPTGDKGSRGDPGTPGV---PGKDGQAGHPGQPGPKGDPGLSGTPGSP 1004

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
            G  G +G  G MG PG  G  G  G+PG  G+ G PG  G  G  G+ GLPG  GIPG  
Sbjct: 1005 GLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGI-GIPGRP 1063

Query: 236  GTNGEKGMT------GPRGNRGKSGINGVPGTPA 263
            G  G++G+       G +G +G +G  G+PG+P 
Sbjct: 1064 GDKGDQGLAGFPGSPGEKGEKGSAGTPGMPGSPG 1097



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 91/164 (55%), Gaps = 18/164 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGY 168
            PG QG  G  G  G+KGEMGV G  G+ G+PG  G PG  G  GD G     GP+GD G+
Sbjct: 863  PGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGF 922

Query: 169  PGPQG---IPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             G +G   +PG  G          +G KGD G  G+IG  G  G  G+PG  G+PG++G 
Sbjct: 923  KGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQ 982

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G PG+   PG  G PG +GT G  G+ GP+G+ G  G+ G PG
Sbjct: 983  AGHPGQ---PGPKGDPGLSGTPGSPGLPGPKGSVGGMGLPGSPG 1023



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 75/137 (54%), Gaps = 16/137 (11%)

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD--MGYPGRIGLDGRDGL 201
           + GPPG  G+PG  G  GP+GD G+PG  G PG  G++G  G   +G+PG  G  G DGL
Sbjct: 644 LPGPPGAAGLPGSPGFPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGL 703

Query: 202 PGEPGLDGIPGRNGMDGIPGK--------------DGLPGKDGIPGTNGTNGEKGMTGPR 247
           PGE G  G PGR G +G+PG                GL G+ G+PG  GT GEKG  G  
Sbjct: 704 PGEIGRPGSPGRPGFNGLPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGP 763

Query: 248 GNRGKSGINGVPGTPAI 264
           G  G+ G+ G PG   I
Sbjct: 764 GVPGEQGLTGPPGLQGI 780



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 85/171 (49%), Gaps = 26/171 (15%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GP G KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 960  GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGPKGSVGGMGLP 1019

Query: 167  ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
                     G PG QG+PG  G++G KG+        +G PGR G  G  GL G PG  G
Sbjct: 1020 GSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPG 1079

Query: 210  IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G PG  G PG  G PG  G  G  G+ G +G++G  G++GVPG
Sbjct: 1080 EKGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLDGVPG 1130



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 84/175 (48%), Gaps = 23/175 (13%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------- 155
            PG  GP G  G  G KG+ G+ G  G +G PG  G  G  G+PG                
Sbjct: 890  PGSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQ 949

Query: 156  --DEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
              D+G++G   P GD G  G  G PG  GK G  G  G PG  G  G  G PG PGL G 
Sbjct: 950  KGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGP 1009

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN--GVPGTPA 263
             G  G  G+PG  G  G  GIPG+ G  G  G  G +G +G+SG+   G+PG P 
Sbjct: 1010 KGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPG 1064



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 72/148 (48%), Gaps = 24/148 (16%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G KG++G +G PG+ G  G  G+PG +G          PG  G PG +G+ G  G  G P
Sbjct: 840 GPKGDKGSQGLPGLTGQSGLPGLPGQQG---------TPGVPGFPGSKGEMGVMGTPGQP 890

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT------------- 237
           G  G  G  GLPGE G  G+PG +G  G PG  G  G  G+PG  G+             
Sbjct: 891 GSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQK 950

Query: 238 --NGEKGMTGPRGNRGKSGINGVPGTPA 263
              GEKG  GP G++G  G  G PG P 
Sbjct: 951 GDQGEKGQIGPTGDKGSRGDPGTPGVPG 978



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 87/207 (42%), Gaps = 65/207 (31%)

Query: 112 PGLQGPIGQKGEIG-----AKGEMGVKG------ERGEKGAPGV------VGPPGPQGIP 154
           PG  GP GQKGE G      KG+ G+ G      E+G  G PGV       GPPG QGI 
Sbjct: 722 PGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGIR 781

Query: 155 GDEGKRGP-----------------------------------KGDMGYPGPQGIPGDEG 179
           GD G  G                                    KG+ G+P   G PG + 
Sbjct: 782 GDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFP---GFPGLD- 837

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------GRNGMDGIPGKDGLPGKDG 230
             GPKGD G  G  GL G+ GLPG PG  G P         G  G+ G PG+ G PG  G
Sbjct: 838 MPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAG 897

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
            PG  G  G+ G+ G  G RG  G  G
Sbjct: 898 TPGLPGEKGDHGLPGSSGPRGDPGFKG 924



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 93/225 (41%), Gaps = 67/225 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--PGPQGIPGDEGKRGPKGDMGYP 169
           PG  GP G +G  G  G  G+ GE+G  G PG+  P  PGP+G+ G  G+ G  G  G P
Sbjct: 657 PGFPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGLPGEIGRPGSPGRP 716

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------IPGRNGMDGIP 220
           G  G+PG+ G +G KG+ G  G  GL G+ GLPG PG  G         +PG  G+ G P
Sbjct: 717 GFNGLPGNPGPQGQKGEPGI-GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPP 775

Query: 221 GKDGLPGKDGIPGTNGT--------------------------------NGEKG------ 242
           G  G+ G  G PG  G                                  GEKG      
Sbjct: 776 GLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFPGFPG 835

Query: 243 --MTGPRGNRGKSGI---------------NGVPGTPAICAYKRE 270
             M GP+G++G  G+                G PG P     K E
Sbjct: 836 LDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGE 880



 Score = 45.8 bits (107), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 10/87 (11%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG----- 173
           G+ G+ G +G+ G  GE+GE+G+PG+ G  G  G+PG +G +G KG+ G PGP G     
Sbjct: 278 GEPGKQGPRGKPGKDGEKGERGSPGIPGDSGYPGLPGRQGPQGEKGEAGLPGPPGTVIGT 337

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDG 200
           +P  E     KGD GYPG  GL G  G
Sbjct: 338 MPLGE-----KGDRGYPGAPGLRGEPG 359



 Score = 45.8 bits (107), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 75/157 (47%), Gaps = 38/157 (24%)

Query: 127 KGEMG--VKGERGEKGAPGVVGPPGPQGIPGDE-----------GKRGPKGDMGYPGPQG 173
           KG+MG   +G +G+KG  GV GPPG   +PG             G++G KG+ G+PG   
Sbjct: 217 KGQMGSSFQGPKGDKGEQGVSGPPG---VPGQAQVKEKGDFAPTGEKGQKGEPGFPG--- 270

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
           +PG        G+ G PG+ G  G+      PG DG  G  G  GIPG  G PG  G  G
Sbjct: 271 VPG-------YGEKGEPGKQGPRGK------PGKDGEKGERGSPGIPGDSGYPGLPGRQG 317

Query: 234 TNGTNGEKGMTGPRGN------RGKSGINGVPGTPAI 264
             G  GE G+ GP G        G+ G  G PG P +
Sbjct: 318 PQGEKGEAGLPGPPGTVIGTMPLGEKGDRGYPGAPGL 354



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 60/123 (48%), Gaps = 28/123 (22%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           EIG  G+ G KG+RG               +PG +G  G       PGPQG PG  G+ G
Sbjct: 487 EIGFPGQPGAKGDRG---------------LPGRDGLEG------LPGPQGSPGLIGQPG 525

Query: 183 PKGDMGYPGRIGLD----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
            KG+   PG I  D    G  G PG PG  G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 526 AKGE---PGEIFFDMRLKGDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGLK 582

Query: 239 GEK 241
           GE+
Sbjct: 583 GER 585



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 85/196 (43%), Gaps = 69/196 (35%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PG  GP GQKGE G+ G  G  GE+GE+G PG   P    G PG +G +G KG++G+PG 
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFP----GFPGSKGDKGSKGEVGFPGL 1196

Query: 171  --PQGIPGDEGKRG-----------------------PKGDMGYP--------------- 190
                GIPG +G++G                       PKGD G                 
Sbjct: 1197 AGSPGIPGVKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPP 1256

Query: 191  ------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                  G  G  G  G PG PG            +PG  G PG  G+PG  G+    G+T
Sbjct: 1257 GFPGINGPKGDKGNQGWPGAPG------------VPGPKGDPGFQGMPGIGGS---PGIT 1301

Query: 245  GPRGNRGKSGINGVPG 260
               G++G  G+ GVPG
Sbjct: 1302 ---GSKGDMGLPGVPG 1314



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 102/274 (37%), Gaps = 94/274 (34%)

Query: 111  PPGLQGPIGQKGEIGA-----------------------------------KGEMGV--- 132
            PPGLQG  G  G  G                                    KGE G    
Sbjct: 774  PPGLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFPGF 833

Query: 133  --------KGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
                    KG++G +G PG+ G       PG QG PG  G  G KG+MG     G PG  
Sbjct: 834  PGLDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGV---MGTPGQP 890

Query: 179  GKRGPKGDMGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIP--------------- 220
            G  GP G  G PG     GL G  G  G+PG  G  G  G+ G+P               
Sbjct: 891  GSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQK 950

Query: 221  ---------------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
                           G  G PG  G+PG +G  G  G  GP+G+    G++G PG+P + 
Sbjct: 951  GDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGD---PGLSGTPGSPGLP 1007

Query: 266  AYKRESCSL-LPNSETSQLLIPPTIVGSEHIFSS 298
              K     + LP S   + +  P I GS+ +  S
Sbjct: 1008 GPKGSVGGMGLPGSPGEKGV--PGIPGSQGVPGS 1039


>gi|149025955|gb|EDL82198.1| rCG28740, isoform CRA_c [Rattus norvegicus]
          Length = 402

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 96/188 (51%), Gaps = 21/188 (11%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GP GQKG IGA G  G+ G++GE G PG  G    PGP+G PG+EG+   KGD G  GP+
Sbjct: 177 GPPGQKGSIGAPGTPGMDGQKGEPGLPGAAGQSGLPGPKGEPGNEGE---KGDAGENGPK 233

Query: 173 GIPGDEGKRG--PKGDMGYPGRIGLDGRDG------------LPGEPGLDGIPGRNGMDG 218
           G  G++G  G    G  G PG  G  G+ G            + GEPG  G  G  G+ G
Sbjct: 234 GDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPG 293

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
           +PG  G  G+ G PG  G  G+ G  GP+G +G+SG  G  G+      K +S +L P  
Sbjct: 294 LPGTKGERGEAGPPG-RGERGDPGAPGPKGKQGESGARGPKGSKGDRGDKGDSGALGPRG 352

Query: 279 ETSQLLIP 286
              Q   P
Sbjct: 353 PPGQKGDP 360



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 47/91 (51%), Gaps = 10/91 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     E   PGL G  G++GE G  G       RGE+G PG    PGP+G  G+ G R
Sbjct: 281 GFIGPQGEPGLPGLPGTKGERGEAGPPG-------RGERGDPGA---PGPKGKQGESGAR 330

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           GPKG  G  G +G  G  G RGP G  G PG
Sbjct: 331 GPKGSKGDRGDKGDSGALGPRGPPGQKGDPG 361



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 61/134 (45%), Gaps = 34/134 (25%)

Query: 113 GLQGPIGQKGEIGAKGE--MGVKGERGE---------------------KGAPGVVGP-- 147
           G  GP G  GE G  G    G+KGE GE                     KG PG +GP  
Sbjct: 228 GENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQG 287

Query: 148 -PGPQGIPGDEGK--------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            PG  G+PG +G+        RG +GD G PGP+G  G+ G RGPKG  G  G  G  G 
Sbjct: 288 EPGLPGLPGTKGERGEAGPPGRGERGDPGAPGPKGKQGESGARGPKGSKGDRGDKGDSGA 347

Query: 199 DGLPGEPGLDGIPG 212
            G  G PG  G PG
Sbjct: 348 LGPRGPPGQKGDPG 361



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 46/94 (48%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G+PG PG  G PG  G+ G  G  G  G  G PGT G +G+KG  G  G  G+
Sbjct: 149 TGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGTPGMDGQKGEPGLPGAAGQ 208

Query: 253 SGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           SG+ G  G P     K ++    P  +T +   P
Sbjct: 209 SGLPGPKGEPGNEGEKGDAGENGPKGDTGEKGDP 242



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 46/95 (48%), Gaps = 20/95 (21%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVV-----GPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           IG +GE G  G  G KGERGE G PG       G PGP+G  G+ G RGPKG        
Sbjct: 283 IGPQGEPGLPGLPGTKGERGEAGPPGRGERGDPGAPGPKGKQGESGARGPKGS------- 335

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                   +G +GD G  G +G  G  G  G+PG 
Sbjct: 336 --------KGDRGDKGDSGALGPRGPPGQKGDPGA 362



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 43/84 (51%), Gaps = 9/84 (10%)

Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKDGLPGKDGIPG 233
           D GK GP+G  G PG  G       PGE GL    G PG+ G  G PG  G+ G+ G PG
Sbjct: 148 DTGKDGPRGMPGVPGEPGK------PGEQGLMGPLGPPGQKGSIGAPGTPGMDGQKGEPG 201

Query: 234 TNGTNGEKGMTGPRGNRGKSGING 257
             G  G+ G+ GP+G  G  G  G
Sbjct: 202 LPGAAGQSGLPGPKGEPGNEGEKG 225


>gi|307548928|ref|NP_001182600.1| collagen alpha-1(II) chain precursor [Oryctolagus cuniculus]
          Length = 1487

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 80/198 (40%), Positives = 91/198 (45%), Gaps = 33/198 (16%)

Query: 97   VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
               +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 815  AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 874

Query: 151  QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPK---GD 186
            QG  G  G +G +G  G PG  G PG  G                     K GPK   GD
Sbjct: 875  QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKEGPKGARGD 934

Query: 187  MGYPGRIGLDGRDGLPGEPGLDGIPGR---NGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
             G  GR G  G  G  G PGL G PG    +G DG PG  GL G+ GI G  G  GE+G 
Sbjct: 935  SGPAGRAGDPGLQGPAGPPGLKGEPGDSGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 994

Query: 244  TGPRGNRGKSGINGVPGT 261
             G  G  G+ G  G PG 
Sbjct: 995  PGLPGPSGEPGKQGAPGA 1012



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 86/187 (45%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG P   GP G  G  G+EGKRG +            
Sbjct: 447 GPLGPKGQTGEPGIAGFKGEQGPKGEPDPAGPQGAPGPAGEEGKRGARGEPGGAGPAGPP 506

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 507 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 566

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 567 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 626

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 627 GLRGLPG 633



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 84/199 (42%), Gaps = 57/199 (28%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 860

Query: 167 GYPGPQ---GIPGDE------------GKRGPKGDMGYPGRIGL---------------- 195
           G PGPQ   G PG +            G +GP G  G+PG  G                 
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 920

Query: 196 --------------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                          G  G  G+PGL G  G  G+ G PG  G  G DG PG  G  G++
Sbjct: 921 GPSGKEGPKGARGDSGPAGRAGDPGLQGPAGPPGLKGEPGDSGPSGADGPPGPQGLAGQR 980

Query: 242 GMTGPRGNRGKSGINGVPG 260
           G+ G  G RG+ G  G+PG
Sbjct: 981 GIVGLPGQRGERGFPGLPG 999



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 750 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 804 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 860

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 861 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 903



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 82/186 (44%), Gaps = 36/186 (19%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-------- 170
           G+ G  GA+G  G +G RGE G PG  GP G  G PG +G  G KG  G PG        
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 434

Query: 171 ----PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGMD------ 217
               P G  G  G  GPKG  G PG  G  G  G  GEP   G  G PG  G +      
Sbjct: 435 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPDPAGPQGAPGPAGEEGKRGAR 494

Query: 218 ---------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                          G PG  G PG+DG+ G  G  GE+G +G  G +G +G  G PG P
Sbjct: 495 GEPGGAGPAGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEP 554

Query: 263 AICAYK 268
            +   +
Sbjct: 555 GLPGAR 560



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 89/209 (42%), Gaps = 60/209 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 522 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 581

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 582 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 638

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 698

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAI 264
           GE+G  G RG+ G  G+    G+PGTP  
Sbjct: 699 GERGFPGERGSPGAQGLQGARGLPGTPGT 727



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 67/141 (47%), Gaps = 27/141 (19%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------- 181
           ++G  GE+GA G+ GP            +G +GD+G  GP+G PG +G R          
Sbjct: 748 LQGMPGERGAAGIAGP------------KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPG 795

Query: 182 -----GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                G KG++G PG  G  G  G PGE G  G PG  G  G PG DG PG  G  G  G
Sbjct: 796 PAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAG 855

Query: 237 TNGEKGMTGPRGNRGKSGING 257
             G+ G  GP+G  G  G  G
Sbjct: 856 QKGDAGAPGPQGPSGAPGPQG 876



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 85/211 (40%), Gaps = 57/211 (27%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
            QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 851  QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 910

Query: 150  -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPG---DEGKRGPKGDMGY 189
                             P+G  GD G  G  GD G  GP G PG   + G  GP G  G 
Sbjct: 911  NGNPGPPGPPGPSGKEGPKGARGDSGPAGRAGDPGLQGPAGPPGLKGEPGDSGPSGADGP 970

Query: 190  PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
            PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 971  PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 1030

Query: 228  -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                 ++G PG +G  G  G  G +G+RG++
Sbjct: 1031 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 1061



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 85/208 (40%), Gaps = 39/208 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            PG  G  G +G PG+ G+ GP G  G+ GP G  G  G +G +G+ G  G  G  G  G
Sbjct: 808 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 867

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT------------------------NG 236
             G PG  G  G  G  G  G  G PG  G PG                          G
Sbjct: 868 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKEG 927

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G +G +GP G  G  G+ G  G P +
Sbjct: 928 PKGARGDSGPAGRAGDPGLQGPAGPPGL 955



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 84/195 (43%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPG--------------------- 143
           E   PGL GP G++G   E G+ G  G++G RG  G PG                     
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGAQGLQGARGLPGTPGTDGPKGAPGPAGPPGAQGPPG 747

Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
           + G PG +G  G  G +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 748 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 807

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 808 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 858

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 859 DAGAPGPQGPSGAPG 873



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 90/226 (39%), Gaps = 84/226 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP------------KGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+ G             +G+ 
Sbjct: 597 GQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQ 656

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QG+PG+ G  G   P+G+ G+PG        GL 
Sbjct: 657 GAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 716

Query: 197 GRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GKD 223
           G  GLPG PG D                     G+PG  G  GI             G +
Sbjct: 717 GARGLPGTPGTDGPKGAPGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 776

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 777 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 822



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 39/67 (58%)

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG+ G  GP+G  G+PG  GL G  G  G PGLDG  G  G  G+ G+ G PG++G P
Sbjct: 261 GKPGERGLPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSP 320

Query: 233 GTNGTNG 239
           G  G  G
Sbjct: 321 GPMGPRG 327



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G PG+ G  GP+G  G+PG  G+PG +G R      GYPG  G  G  G PG  G  G P
Sbjct: 261 GKPGERGLPGPQGARGFPGTPGLPGVKGHR------GYPGLDGAKGEAGAPGVKGESGSP 314

Query: 212 GRNGMDGIPGKDGLPGK 228
           G NG  G  G  GLPG+
Sbjct: 315 GENGSPGPMGPRGLPGE 331



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 83/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 284 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 343

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 403

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 404 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 460

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G    +G  G PG PA    KR
Sbjct: 461 AGFKGEQGPKGEPDPAGPQGAPG-PAGEEGKR 491



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 79/171 (46%), Gaps = 39/171 (22%)

Query: 137 GEKGAPGVVGP------PGPQGIPGDEGKRGPKGDMGYPGP------------------- 171
           GE GAPG+VGP      PG +G PG +G +G +G  G PG                    
Sbjct: 687 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGARGLPGTPGTDGPKGAPGPAGPPGAQGPP 746

Query: 172 --QGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGI------PGRNGMDGIP 220
             QG+PG+ G  G   PKGD G    +G  G +G PG+ G  G+      PG  G +G  
Sbjct: 747 GLQGMPGERGAAGIAGPKGDRGD---VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G+ G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 804 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 854



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 84/209 (40%), Gaps = 60/209 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G +G  G  G  GVKG RG    PG+ G  G  G PG +G+ G  G+ G PGP 
Sbjct: 267 GLPGPQGARGFPGTPGLPGVKGHRGY---PGLDGAKGEAGAPGVKGESGSPGENGSPGPM 323

Query: 173 GIPGDEGKR---------------------------------------GPKGDMGYPGRI 193
           G  G  G+R                                       G KG+ G  G  
Sbjct: 324 GPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGAR 383

Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG------------TNGEK 241
           G +G  G  GEPG  G PG  G  G PG DG+PG  G  G  G              G +
Sbjct: 384 GPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ 443

Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G TGP G +G++      G P I  +K E
Sbjct: 444 GATGPLGPKGQT------GEPGIAGFKGE 466



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 82/186 (44%), Gaps = 33/186 (17%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G      +  P G  GP G +G  G +G +G+ G+RGE+G PG+   PGP G PG     
Sbjct: 954  GLKGEPGDSGPSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGL---PGPSGEPGK---- 1006

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                       QG PG  G RGP G +G PG  G  G  G  G PG DG PGR+G  G+ 
Sbjct: 1007 -----------QGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVK 1055

Query: 221  GKDG---------------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
            G  G                PG  G  G  G  GE G  GP G  G +G  G+PG     
Sbjct: 1056 GDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIPGPQGPR 1115

Query: 266  AYKRES 271
              K ES
Sbjct: 1116 GDKGES 1121



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 27/95 (28%)

Query: 112  PGLQGPIGQKGEIGAKGE------------------------MGVKGERGEKGAPGVVGP 147
            PG  GP G+ G  G KG+                         G +G+RGE GA G +GP
Sbjct: 1040 PGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGP 1099

Query: 148  PGP---QGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
             GP   +GIPG +G RG KG+ G PG +G+ G  G
Sbjct: 1100 SGPAGARGIPGPQGPRGDKGESGEPGERGLKGHRG 1134


>gi|410900017|ref|XP_003963493.1| PREDICTED: collagen alpha-1(II) chain-like isoform 1 [Takifugu
           rubripes]
          Length = 1487

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 87/168 (51%), Gaps = 15/168 (8%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPKG 164
           E  P G  GP+G +G  G  GE G +G RGE GA G +GPPG +G PG+    G+ G  G
Sbjct: 466 ETGPKGELGPLGPQGAPGPAGEEGKRGARGEPGAAGPIGPPGERGAPGNRGFPGQDGLAG 525

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG------ 218
             G PG +G+PG  G +G  GD G PG  GL G  GL G PG  G  G+ G  G      
Sbjct: 526 GKGAPGDRGVPGAAGPKGTGGDPGRPGESGLPGARGLTGRPGDAGPQGKVGASGPAGDDG 585

Query: 219 ------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   G  G PG  G PG  G NGE G  G +G  G+ G+ G+PG
Sbjct: 586 RPGPPGPLGARGQPGVMGFPGPKGANGEPGKPGEKGLLGRQGLRGLPG 633



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/142 (46%), Positives = 83/142 (58%), Gaps = 12/142 (8%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPKGDMGYPGPQ 172
           G +G KG+ G  G  G+KGE G KG    +GP GPQG P   G+EGKRG +G+ G  GP 
Sbjct: 447 GSLGPKGQSGDPGLPGLKGETGPKGE---LGPLGPQGAPGPAGEEGKRGARGEPGAAGPI 503

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG+   RG  G+ G+PG+ GL G  G PG+ G+ G  G  G  G PG+   PG+ G+P
Sbjct: 504 GPPGE---RGAPGNRGFPGQDGLAGGKGAPGDRGVPGAAGPKGTGGDPGR---PGESGLP 557

Query: 233 GTNGTNGEKGMTGPRGNRGKSG 254
           G  G  G  G  GP+G  G SG
Sbjct: 558 GARGLTGRPGDAGPQGKVGASG 579



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 86/177 (48%), Gaps = 36/177 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           P G  GP G  G+ G KGE+G  G++G+ G+PG  GP   PGP G  G  G +G +G  G
Sbjct: 832 PAGFAGPPGADGQPGVKGELGESGQKGDSGSPGPQGPSGAPGPVGPTGVSGPKGARGAQG 891

Query: 168 YPGPQGIPGDEGK------------------------RGPKGDMGYPGRIGLDGRDGLPG 203
            PG  G PG  G+                        +G +GD G PGR          G
Sbjct: 892 APGSTGFPGSAGRVGPPGPNGNPGAAGPAGPAGKDGPKGTRGDAGPPGRH---------G 942

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + GL G PG+ G  G PG+DG PG +G  G  G  G +G+ G  G RG+ G  G+PG
Sbjct: 943 DAGLRGPPGQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGIVGLPGQRGERGFPGLPG 999



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 88/185 (47%), Gaps = 39/185 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKR-------- 160
           PG +G  G  G  GA+G+ G +GE G  G+PG  G    PG  GIPG +G          
Sbjct: 371 PGAKGEAGPTGNRGAEGQQGPRGEAGTPGSPGPAGASGNPGTDGIPGAKGSTGGPGIAGA 430

Query: 161 -------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMG------YPGRIGL 195
                              GPKG  G PG   +PG +G+ GPKG++G       PG  G 
Sbjct: 431 PGFPGPRGPPGPQGATGSLGPKGQSGDPG---LPGLKGETGPKGELGPLGPQGAPGPAGE 487

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +G+ G  GEPG  G  G  G  G PG  G PG+DG+ G  G  G++G+ G  G +G  G 
Sbjct: 488 EGKRGARGEPGAAGPIGPPGERGAPGNRGFPGQDGLAGGKGAPGDRGVPGAAGPKGTGGD 547

Query: 256 NGVPG 260
            G PG
Sbjct: 548 PGRPG 552



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 86/191 (45%), Gaps = 36/191 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------------ 147
           PG  GP G  G+ G  GE G+ G RG  G PG  GP                        
Sbjct: 536 PGAAGPKGTGGDPGRPGESGLPGARGLTGRPGDAGPQGKVGASGPAGDDGRPGPPGPLGA 595

Query: 148 ---------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                    PGP+G  G+ GK G KG +G  G +G+PG +G+ G  G  G  G +G  G 
Sbjct: 596 RGQPGVMGFPGPKGANGEPGKPGEKGLLGRQGLRGLPGKDGETGSAGPPGPAGPVGERGE 655

Query: 199 DGLPGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G PG  G  G+PG +G     G PG  GLPG+ G+PG  G  GE+G  G RG  G  G+
Sbjct: 656 QGQPGPSGFQGLPGPSGSPGEAGKPGDQGLPGEGGVPGAAGPRGERGFPGERGGAGPQGL 715

Query: 256 NGVPGTPAICA 266
            G  G P    
Sbjct: 716 QGPRGLPGTAG 726



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 79/166 (47%), Gaps = 24/166 (14%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG--------- 161
           PPGLQG  G++G  G  G  G +G+ GEK         GP+G PG +G RG         
Sbjct: 745 PPGLQGMPGERGAGGIPGAKGDRGDLGEK---------GPEGAPGKDGSRGLTGPIGPPG 795

Query: 162 ------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
                  KG+ G  GP G PG  G  G +G++G PG  G  G  G  G+PG+ G  G +G
Sbjct: 796 PSGPNGAKGESGPVGPNGAPGSRGTPGDRGEIGPPGPAGFAGPPGADGQPGVKGELGESG 855

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G  G  G PG  G  G  G  G RG +G  G  G PG+
Sbjct: 856 QKGDSGSPGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGSTGFPGS 901



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 92/208 (44%), Gaps = 57/208 (27%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYPGPQGI 174
           +G++GE G  G  G +G  G  G+PG  G PG QG+PG+    G  GP+G+ G+PG +G 
Sbjct: 650 VGERGEQGQPGPSGFQGLPGPSGSPGEAGKPGDQGLPGEGGVPGAAGPRGERGFPGERGG 709

Query: 175 PGDEGKRGPKGDMGYPGRIGLDG---------RDGLPGEPGLDGIPGRNGMDGIPGK--- 222
            G +G +GP+   G PG  G DG           G  G PGL G+PG  G  GIPG    
Sbjct: 710 AGPQGLQGPR---GLPGTAGSDGPKGAIGPAGAAGPQGPPGLQGMPGERGAGGIPGAKGD 766

Query: 223 ---------DGLPGKD------------------------------GIPGTNGTNGEKGM 243
                    +G PGKD                              G PG+ GT G++G 
Sbjct: 767 RGDLGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGAKGESGPVGPNGAPGSRGTPGDRGE 826

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRES 271
            GP G  G +G  G  G P +     ES
Sbjct: 827 IGPPGPAGFAGPPGADGQPGVKGELGES 854



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 74/149 (49%), Gaps = 15/149 (10%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IPGD 156
            PG QGP G  G +G  G  G KG RG +GAPG  G PG  G                 G 
Sbjct: 863  PGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGSTGFPGSAGRVGPPGPNGNPGAAGPAGP 922

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
             GK GPKG  G  GP G  GD G RGP G  G  G  G DG  G  G  G  G+ G  G+
Sbjct: 923  AGKDGPKGTRGDAGPPGRHGDAGLRGPPGQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGI 982

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
             G+PG+ G  G  G+PG +G  G++G +G
Sbjct: 983  VGLPGQRGERGFPGLPGPSGEPGKQGASG 1011



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 83/185 (44%), Gaps = 39/185 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---------GIPGDEGKRGPK 163
           G  GP G  GE G  GE G+ G +G +G PG  G  G           G  G++G+ GP 
Sbjct: 603 GFPGPKGANGEPGKPGEKGLLGRQGLRGLPGKDGETGSAGPPGPAGPVGERGEQGQPGPS 662

Query: 164 GDMGYPGPQGIPGDEGK---------------RGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  G PGP G PG+ GK                GP+G+ G+PG  G  G  GL G  GL 
Sbjct: 663 GFQGLPGPSGSPGEAGKPGDQGLPGEGGVPGAAGPRGERGFPGERGGAGPQGLQGPRGLP 722

Query: 209 GIPGRNG------------MDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G +G              G PG  G+PG+    GIPG  G  G+ G  GP G  GK 
Sbjct: 723 GTAGSDGPKGAIGPAGAAGPQGPPGLQGMPGERGAGGIPGAKGDRGDLGEKGPEGAPGKD 782

Query: 254 GINGV 258
           G  G+
Sbjct: 783 GSRGL 787



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 88/208 (42%), Gaps = 45/208 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   S  E   PG QG  G+ G  GA G  G +G  GE+G  G  G  GP+G+PG  
Sbjct: 666 GLPGPSGSPGEAGKPGDQGLPGEGGVPGAAGPRGERGFPGERGGAGPQGLQGPRGLPGTA 725

Query: 158 GKRGPK---------GDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLP 202
           G  GPK         G  G PG QG+PG+       G +G +GD+G  G  G  G+DG  
Sbjct: 726 GSDGPKGAIGPAGAAGPQGPPGLQGMPGERGAGGIPGAKGDRGDLGEKGPEGAPGKDGSR 785

Query: 203 ---------------------------GEPGLDGIPGRNGMDGIPGKDGL---PGKDGIP 232
                                      G PG  G PG  G  G PG  G    PG DG P
Sbjct: 786 GLTGPIGPPGPSGPNGAKGESGPVGPNGAPGSRGTPGDRGEIGPPGPAGFAGPPGADGQP 845

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  GE G  G  G+ G  G +G PG
Sbjct: 846 GVKGELGESGQKGDSGSPGPQGPSGAPG 873



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 64/151 (42%), Gaps = 39/151 (25%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GP G +G+ G  G  G  G RG  G  G  G PG  G PG EG  GP+G  G  G  G+P
Sbjct: 927  GPKGTRGDAGPPGRHGDAGLRGPPGQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGIVGLP 986

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------- 219
            G  G+R                  G PG PG  G PG+ G  G                 
Sbjct: 987  GQRGER------------------GFPGLPGPSGEPGKQGASGSAGDRGPPGPVGPPGLT 1028

Query: 220  -----PGKDGLPGKDGIPGTNGTNGEKGMTG 245
                 PG++G PG DG PG +G +G KG  G
Sbjct: 1029 GPAGDPGREGAPGSDGPPGRDGASGVKGERG 1059



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 81/198 (40%), Gaps = 51/198 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------GPQGIPGDE------G 158
            P G +G  G  G  G  G  G  G++GEKG PG  GPP      GPQG+ G        G
Sbjct: 928  PKGTRGDAGPPGRHGDAGLRGPPGQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGIVGLPG 987

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDGLPG 203
            +RG +G  G PGP G PG +G  G                 G  G PGR G  G DG PG
Sbjct: 988  QRGERGFPGLPGPSGEPGKQGASGSAGDRGPPGPVGPPGLTGPAGDPGREGAPGSDGPPG 1047

Query: 204  EPGLDGIPGRN------------------------GMDGIPGKDGLPGKDGIPGTNGTNG 239
              G  G+ G                          G  G  G+ G  G  G PG  G  G
Sbjct: 1048 RDGASGVKGERGNSGPAGAPGAPGAPGAPGSVGPLGKQGDRGEAGAQGPAGPPGLAGARG 1107

Query: 240  EKGMTGPRGNRGKSGING 257
              G  GPRG++G++G  G
Sbjct: 1108 MAGPQGPRGDKGEAGEAG 1125



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 80/216 (37%), Gaps = 75/216 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PGL G  G+ G  GAKGE G  GE G        GP GP+G+PG+ G+            
Sbjct: 293 PGLDGAKGESGAAGAKGETGSAGENG------APGPMGPRGLPGERGRPGAAGAAGARGN 346

Query: 161 ----------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                                 G  G  G  GP G  G EG++GP+G+ G PG  G  G 
Sbjct: 347 DGLPGPAGPPGPVGPAGAPGFPGSPGAKGEAGPTGNRGAEGQQGPRGEAGTPGSPGPAGA 406

Query: 199 DGLPGEPGLDGIPGR---------------------------------NGMDGIPGKDGL 225
               G PG DGIPG                                   G  G PG  GL
Sbjct: 407 S---GNPGTDGIPGAKGSTGGPGIAGAPGFPGPRGPPGPQGATGSLGPKGQSGDPGLPGL 463

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+ G  G  G  G +G  GP G  GK G  G PG 
Sbjct: 464 KGETGPKGELGPLGPQGAPGPAGEEGKRGARGEPGA 499



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 82/196 (41%), Gaps = 48/196 (24%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
              QG      E  PPG +GP G +G  G++G +G+ G+RGE+G PG+   PGP G PG +
Sbjct: 951  GQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGIVGLPGQRGERGFPGL---PGPSGEPGKQ 1007

Query: 158  GKRGPK---------------------GDMGYPGPQGIPGDEGKRGPKGDMG-------- 188
            G  G                       G  G PG  G PG +G  G KG+ G        
Sbjct: 1008 GASGSAGDRGPPGPVGPPGLTGPAGDPGREGAPGSDGPPGRDGASGVKGERGNSGPAGAP 1067

Query: 189  -------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                    PG +G  G+ G  GE          G  G  G  GL G  G+ G  G  G+K
Sbjct: 1068 GAPGAPGAPGSVGPLGKQGDRGE---------AGAQGPAGPPGLAGARGMAGPQGPRGDK 1118

Query: 242  GMTGPRGNRGKSGING 257
            G  G  G RG+ G  G
Sbjct: 1119 GEAGEAGERGQKGHRG 1134



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 56/104 (53%), Gaps = 3/104 (2%)

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGL 195
           +GAPG  G PGP G  G  G  GP G  G  G  G PG  G+R   GP+G  G+PG  GL
Sbjct: 224 QGAPGEAGEPGPAGPMGPRGPAGPPGKAGSDGEAGKPGKAGERGPAGPQGARGFPGTPGL 283

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            G  G  G PGLDG  G +G  G  G+ G  G++G PG  G  G
Sbjct: 284 PGIKGHRGHPGLDGAKGESGAAGAKGETGSAGENGAPGPMGPRG 327


>gi|348509451|ref|XP_003442262.1| PREDICTED: collagen alpha-1(V) chain [Oreochromis niloticus]
          Length = 1873

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 90/178 (50%), Gaps = 14/178 (7%)

Query: 86   VWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV 145
              L     +P VA  G   ST E  P G  G IGQ G  G  G  G  GE+GE   PG  
Sbjct: 1090 AGLKGGEGLPGVA--GPIGSTGERGPAGPAGAIGQPGRPGGVGPAGPMGEKGE---PGEK 1144

Query: 146  GPPGPQGIPGDEGKR---------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
            GPPGP G  G+ G R         GP G+ G  G  G+PG +G +G KG+ G PG +G+ 
Sbjct: 1145 GPPGPAGRDGELGPRGLPGTAGPPGPPGEDGDKGETGVPGQKGSKGDKGEAGPPGPVGIQ 1204

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G  G PG  G DG  G  G  G+ G  G  G  G  G +G +G +GM GP G +G+SG
Sbjct: 1205 GPVGQPGLLGADGESGPRGQQGMNGAKGDEGPRGFKGGSGPSGLQGMPGPPGEKGESG 1262



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 82/152 (53%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+QG  G +G IG  GE G +G++G +G PG+ GPPG  G  G  G++G +G  G  GP
Sbjct: 745 PGVQGLPGPQGLIGLPGEKGPQGKQGMQGLPGIDGPPGHPGREGHPGEKGIQGLPGAQGP 804

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G PG  G +G  G  G  G  G  G DG PG  G  G+ G  G +G PG  G  G +G 
Sbjct: 805 VGYPGIRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGVKGDMGDNGAPGPRGEDGPEGS 864

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G  G+ G  G  G +G  G+ G+PG P 
Sbjct: 865 KGQAGPMGDTGALGIAGEKGNLGVPGLPGYPG 896



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 93/194 (47%), Gaps = 27/194 (13%)

Query: 116 GPIGQKGEIGAKGEM------------------GVKGERGEKGAPGVVGPPGPQGIPGDE 157
           GP GQ GE G +G +                  GV G +G  G  G +GPPG QG PG +
Sbjct: 689 GPRGQPGEPGPRGLVGPRGPPGPPGQPGIQGTDGVPGSKGNPGPIGEMGPPGQQGNPGVQ 748

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           G  GP+G +G PG +G  G +G +G  G  G PG     GR+G PGE G+ G+PG  G  
Sbjct: 749 GLPGPQGLIGLPGEKGPQGKQGMQGLPGIDGPPGH---PGREGHPGEKGIQGLPGAQGPV 805

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI------NGVPGTPAICAYKRES 271
           G PG  G+ G DG+ G  G+ GEKG  G  G +G  G+      NG PG       +   
Sbjct: 806 GYPGIRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGVKGDMGDNGAPGPRGEDGPEGSK 865

Query: 272 CSLLPNSETSQLLI 285
               P  +T  L I
Sbjct: 866 GQAGPMGDTGALGI 879



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 88/196 (44%), Gaps = 27/196 (13%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
            V ++GF  S      PG  GP G KG  G  G  G  G  GE+G  G  G  G  G PG 
Sbjct: 1072 VGLKGFRGSRGT---PGQTGPAGLKGGEGLPGVAGPIGSTGERGPAGPAGAIGQPGRPGG 1128

Query: 157  EGKRGPKGDMGYPGPQGIPGDEGKRGP---------------------KGDMGYPGRIGL 195
             G  GP G+ G PG +G PG  G+ G                      KG+ G PG+ G 
Sbjct: 1129 VGPAGPMGEKGEPGEKGPPGPAGRDGELGPRGLPGTAGPPGPPGEDGDKGETGVPGQKGS 1188

Query: 196  DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
             G  G  G PG  GI G  G  G+ G D   G+ G  G  G NG KG  GPRG +G SG 
Sbjct: 1189 KGDKGEAGPPGPVGIQGPVGQPGLLGAD---GESGPRGQQGMNGAKGDEGPRGFKGGSGP 1245

Query: 256  NGVPGTPAICAYKRES 271
            +G+ G P     K ES
Sbjct: 1246 SGLQGMPGPPGEKGES 1261



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/125 (47%), Positives = 68/125 (54%), Gaps = 6/125 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP+G  G  G KG  GV+G +G KG  G  G P   G  GD G +G  GD G PGP
Sbjct: 799 PGAQGPVGYPGIRGVKGADGVRGLKGSKGEKGEDGFP---GFKGDMGVKGDMGDNGAPGP 855

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G  G EG +G  G MG  G +G+ G  G  G PGL G PGR G     G  G PG  G+
Sbjct: 856 RGEDGPEGSKGQAGPMGDTGALGIAGEKGNLGVPGLPGYPGRQGPK---GSLGFPGVAGV 912

Query: 232 PGTNG 236
           PG  G
Sbjct: 913 PGEKG 917



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 100/245 (40%), Gaps = 87/245 (35%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQG--------------- 152
           PPG  G  G+ G +G  G  G+KGERGE G+ G   ++GPPG  G               
Sbjct: 579 PPGPLGLTGRPGPLGDPGPSGLKGERGESGSAGPRGLLGPPGINGRPGKRGRAGADGGRG 638

Query: 153 ------------------IPGDEGKRG------------------------PKGDMGYPG 170
                             +PG++G RG                        P+G  G PG
Sbjct: 639 APGETGTKGDRGFDGLPGLPGNKGHRGDRGKPGPQGPGGEPGERGSNGPVGPRGQPGEPG 698

Query: 171 PQG---------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
           P+G                     +PG +G  GP G+MG PG+ G  G  GLPG  GL G
Sbjct: 699 PRGLVGPRGPPGPPGQPGIQGTDGVPGSKGNPGPIGEMGPPGQQGNPGVQGLPGPQGLIG 758

Query: 210 IPG------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           +PG      + GM G+PG DG PG  G  G  G  G +G+ G +G  G  GI GV G   
Sbjct: 759 LPGEKGPQGKQGMQGLPGIDGPPGHPGREGHPGEKGIQGLPGAQGPVGYPGIRGVKGADG 818

Query: 264 ICAYK 268
           +   K
Sbjct: 819 VRGLK 823



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 75/151 (49%), Gaps = 36/151 (23%)

Query: 146 GPPGPQGIPGDEGKR------------------------------GPKGDMGYPGPQGIP 175
           GP GP+G PG+ G R                              GP G+MG PG QG P
Sbjct: 686 GPVGPRGQPGEPGPRGLVGPRGPPGPPGQPGIQGTDGVPGSKGNPGPIGEMGPPGQQGNP 745

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLPGKD--- 229
           G +G  GP+G +G PG  G  G+ G+ G PG+DG PG  G +G PG+    GLPG     
Sbjct: 746 GVQGLPGPQGLIGLPGEKGPQGKQGMQGLPGIDGPPGHPGREGHPGEKGIQGLPGAQGPV 805

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PG  G  G  G+ G +G++G+ G +G PG
Sbjct: 806 GYPGIRGVKGADGVRGLKGSKGEKGEDGFPG 836



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 81/192 (42%), Gaps = 45/192 (23%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            LV  +G      +  P G  G  G KG++         GE+G+ G PG  GP GP+G PG
Sbjct: 1299 LVGEKGDDGEAGDPGPAGEPGIAGPKGDV---------GEKGDSGPPGAAGPTGPRGTPG 1349

Query: 156  DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN- 214
            ++G +G  G +G+P               GD G PG  G+ G DG PG  G  G PG+  
Sbjct: 1350 EDGPKGNLGPIGFP---------------GDAGPPGEPGVKGVDGAPGSKGDSGEPGKAG 1394

Query: 215  --------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
                                G  G  GK G+ G  G  G  G+ G+ G  GP+G  G+SG
Sbjct: 1395 PPGASGEPGPPGPPGRRGHVGAAGKEGKQGMKGAKGTSGAQGSVGKTGPVGPQGRPGRSG 1454

Query: 255  INGVPGTPAICA 266
              G  G P    
Sbjct: 1455 PEGFRGIPGPAG 1466



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 80/174 (45%), Gaps = 30/174 (17%)

Query: 125  GAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGKRGPKGDMGYPG---PQGIP 175
            G  G+ G KG+ G  GAPG  GP       G +G PG  G  G KG  G PG   P G  
Sbjct: 1049 GTAGKEGAKGDPGPSGAPGKSGPVGLKGFRGSRGTPGQTGPAGLKGGEGLPGVAGPIGST 1108

Query: 176  GDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPG----------- 221
            G+ G  GP G +G PGR   +G  G  G  GEPG  G PG  G DG  G           
Sbjct: 1109 GERGPAGPAGAIGQPGRPGGVGPAGPMGEKGEPGEKGPPGPAGRDGELGPRGLPGTAGPP 1168

Query: 222  ----KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
                +DG  G+ G+PG  G+ G+KG  GP    G  GI G  G P +     ES
Sbjct: 1169 GPPGEDGDKGETGVPGQKGSKGDKGEAGP---PGPVGIQGPVGQPGLLGADGES 1219



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 85/204 (41%), Gaps = 45/204 (22%)

Query: 98   AMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
              +G      E  PPG   +QGP+GQ G +GA GE G +G++G  GA             
Sbjct: 1184 GQKGSKGDKGEAGPPGPVGIQGPVGQPGLLGADGESGPRGQQGMNGA------------K 1231

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG-------------------------- 188
            GDEG RG KG  G  G QG+PG  G++G  G +G                          
Sbjct: 1232 GDEGPRGFKGGSGPSGLQGMPGPPGEKGESGHVGSMGPPGQPGPRGPQGPIGGEGPPGMP 1291

Query: 189  ----YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
                 PG +G  G DG  G+PG  G PG  G  G  G+ G  G  G  G  G  G  G  
Sbjct: 1292 GGVGQPGLVGEKGDDGEAGDPGPAGEPGIAGPKGDVGEKGDSGPPGAAGPTGPRGTPGED 1351

Query: 245  GPRGNRGKSGINGVPGTPAICAYK 268
            GP+GN G  G  G  G P     K
Sbjct: 1352 GPKGNLGPIGFPGDAGPPGEPGVK 1375



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 89/187 (47%), Gaps = 54/187 (28%)

Query: 113  GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQG----------------- 152
            GL+G  G+KGE    G KG+MGVKG+ G+ GAPG  G  GP+G                 
Sbjct: 821  GLKGSKGEKGEDGFPGFKGDMGVKGDMGDNGAPGPRGEDGPEGSKGQAGPMGDTGALGIA 880

Query: 153  ----------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP------------ 190
                      +PG  G++GPKG +G+PG  G+PG++G+RGP G  G              
Sbjct: 881  GEKGNLGVPGLPGYPGRQGPKGSLGFPGVAGVPGEKGRRGPAGQQGTGGQRGPTGARGGR 940

Query: 191  ------------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                        G  G DG  G PGE G  G  GR+G  G  G +G PGKDGIPG  G  
Sbjct: 941  GGKGPTGKPGEKGAAGQDGPPGSPGEQGPRGPQGRHGEPGPKGPNGPPGKDGIPGHPGQR 1000

Query: 239  GEKGMTG 245
            GE G  G
Sbjct: 1001 GEPGFQG 1007



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 72/166 (43%), Gaps = 30/166 (18%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
            +   +G      +  PPG  GP G +   G  GE G KG  G  G PG  GPPG  G+ G
Sbjct: 1320 IAGPKGDVGEKGDSGPPGAAGPTGPR---GTPGEDGPKGNLGPIGFPGDAGPPGEPGVKG 1376

Query: 156  DEGKRGPKGDMGYPGPQ---------------------GIPGDEGKRGPKGDMGYPGRIG 194
             +G  G KGD G PG                       G  G EGK+G KG  G  G  G
Sbjct: 1377 VDGAPGSKGDSGEPGKAGPPGASGEPGPPGPPGRRGHVGAAGKEGKQGMKGAKGTSGAQG 1436

Query: 195  LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
              G+    G  G  G PGR+G +G     G+PG  G PG NG  G+
Sbjct: 1437 SVGKT---GPVGPQGRPGRSGPEGF---RGIPGPAGEPGLNGPLGQ 1476



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 55/111 (49%), Gaps = 9/111 (8%)

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPG 206
            +PG  GK G KGD   PGP G PG  G       RG +G  G  G  GL G +GLPG  G
Sbjct: 1047 LPGTAGKEGAKGD---PGPSGAPGKSGPVGLKGFRGSRGTPGQTGPAGLKGGEGLPGVAG 1103

Query: 207  LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              G  G  G  G  G  G PG+ G  G  G  GEKG  G +G  G +G +G
Sbjct: 1104 PIGSTGERGPAGPAGAIGQPGRPGGVGPAGPMGEKGEPGEKGPPGPAGRDG 1154



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 89/226 (39%), Gaps = 87/226 (38%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GP G+ G  G KG++G   E+G+ G PG  GP GP+G PG++G +G  G +G+PG  G P
Sbjct: 1313 GPAGEPGIAGPKGDVG---EKGDSGPPGAAGPTGPRGTPGEDGPKGNLGPIGFPGDAGPP 1369

Query: 176  GD------EGKRGPKGDMGYPGRI------------------------GLDGRDGLPGEP 205
            G+      +G  G KGD G PG+                         G +G+ G+ G  
Sbjct: 1370 GEPGVKGVDGAPGSKGDSGEPGKAGPPGASGEPGPPGPPGRRGHVGAAGKEGKQGMKGAK 1429

Query: 206  GLDGI---------------PGRNGMDG---IPGKDGLPG-------------------- 227
            G  G                PGR+G +G   IPG  G PG                    
Sbjct: 1430 GTSGAQGSVGKTGPVGPQGRPGRSGPEGFRGIPGPAGEPGLNGPLGQTGPPGPIGPPGLP 1489

Query: 228  -KDGIPGTNGTN---------------GEKGMTGPRGNRGKSGING 257
               G PG+ G                 GEKG  G  GN+G  G  G
Sbjct: 1490 GLKGDPGSKGDKGHGGLIGLIGPPGEPGEKGDRGLPGNQGTQGSKG 1535



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 75/193 (38%), Gaps = 54/193 (27%)

Query: 129  EMGVKGERGEKGAPGVVGPPGPQ------------------GIPGDEGKRGPKG------ 164
            E G  G+ G  G+PG  GP GPQ                  GIPG  G+RG  G      
Sbjct: 951  EKGAAGQDGPPGSPGEQGPRGPQGRHGEPGPKGPNGPPGKDGIPGHPGQRGEPGFQGKNG 1010

Query: 165  ------------DMGYPGPQG---------------IPGDEGKRGPKGDMGYPGRIGLDG 197
                          G  GP G               +PG  GK G KGD G  G  G  G
Sbjct: 1011 PPGPPGVVGPQGKSGETGPTGDRGHPGAPGPPGEHGLPGTAGKEGAKGDPGPSGAPGKSG 1070

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
              GL G  G  G PG+ G  G+ G +GLP   G+ G  G+ GE+G  GP G  G+ G  G
Sbjct: 1071 PVGLKGFRGSRGTPGQTGPAGLKGGEGLP---GVAGPIGSTGERGPAGPAGAIGQPGRPG 1127

Query: 258  VPGTPAICAYKRE 270
              G       K E
Sbjct: 1128 GVGPAGPMGEKGE 1140



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 90/244 (36%), Gaps = 96/244 (39%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGKR 160
            G +G  GQ G +G  G +G+ GE+G  G PG+ G PG QG            +PG++G+R
Sbjct: 860  GPEGSKGQAGPMGDTGALGIAGEKGNLGVPGLPGYPGRQGPKGSLGFPGVAGVPGEKGRR 919

Query: 161  GP------------------------------KGDMGYPGPQGIPGDEGKRGPKGDM--- 187
            GP                              KG  G  GP G PG++G RGP+G     
Sbjct: 920  GPAGQQGTGGQRGPTGARGGRGGKGPTGKPGEKGAAGQDGPPGSPGEQGPRGPQGRHGEP 979

Query: 188  ------------GYPGRIGLDGRDGL------------------PGEPG----------- 206
                        G PG  G  G  G                    GE G           
Sbjct: 980  GPKGPNGPPGKDGIPGHPGQRGEPGFQGKNGPPGPPGVVGPQGKSGETGPTGDRGHPGAP 1039

Query: 207  -------LDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGIN 256
                   L G  G+ G  G PG  G PGK    G+ G  G+ G  G TGP G +G  G+ 
Sbjct: 1040 GPPGEHGLPGTAGKEGAKGDPGPSGAPGKSGPVGLKGFRGSRGTPGQTGPAGLKGGEGLP 1099

Query: 257  GVPG 260
            GV G
Sbjct: 1100 GVAG 1103



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 87/239 (36%), Gaps = 93/239 (38%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG---------------------------------E 138
            PG QGP   KG +G  G  GV GE+G                                 E
Sbjct: 895  PGRQGP---KGSLGFPGVAGVPGEKGRRGPAGQQGTGGQRGPTGARGGRGGKGPTGKPGE 951

Query: 139  KGAPGVVGPPGPQGIPGDEGKRGPKGDM------------------GYPGPQGIPGDEGK 180
            KGA G  GPPG    PG++G RGP+G                    G+PG +G PG +GK
Sbjct: 952  KGAAGQDGPPG---SPGEQGPRGPQGRHGEPGPKGPNGPPGKDGIPGHPGQRGEPGFQGK 1008

Query: 181  R------------------GPKGD------------MGYPGRIGLDGRDGLPGEPGLDGI 210
                               GP GD             G PG  G +G  G PG  G  G 
Sbjct: 1009 NGPPGPPGVVGPQGKSGETGPTGDRGHPGAPGPPGEHGLPGTAGKEGAKGDPGPSGAPGK 1068

Query: 211  PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------RGNRGKSGINGVPGTPA 263
             G  G+ G  G  G PG+ G  G  G  G  G+ GP      RG  G +G  G PG P 
Sbjct: 1069 SGPVGLKGFRGSRGTPGQTGPAGLKGGEGLPGVAGPIGSTGERGPAGPAGAIGQPGRPG 1127



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 57/128 (44%), Positives = 67/128 (52%), Gaps = 3/128 (2%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G  G+ G +G  G KG  G +G+ G  GP GPQG P   G+ GP+G  G PGP G PG 
Sbjct: 1414 VGAAGKEGKQGMKGAKGTSGAQGSVGKTGPVGPQGRP---GRSGPEGFRGIPGPAGEPGL 1470

Query: 178  EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
             G  G  G  G  G  GL G  G PG  G  G  G  G+ G PG+ G  G  G+PG  GT
Sbjct: 1471 NGPLGQTGPPGPIGPPGLPGLKGDPGSKGDKGHGGLIGLIGPPGEPGEKGDRGLPGNQGT 1530

Query: 238  NGEKGMTG 245
             G KG  G
Sbjct: 1531 QGSKGDLG 1538



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 45/111 (40%), Gaps = 39/111 (35%)

Query: 186 DMGYPGRIGLDGRDGLPGEPG------------------------------------LDG 209
           D+G PGR GL G DG+PG PG                                    L G
Sbjct: 519 DLGPPGRPGLSGADGIPGPPGTLLMLPFQFGGDSQKGPVVSPQQAQAQAILQQAKMSLRG 578

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG  G+ G PG  G PG  G+    G  GE G  GPRG  G  GING PG
Sbjct: 579 PPGPLGLTGRPGPLGDPGPSGL---KGERGESGSAGPRGLLGPPGINGRPG 626



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 73/191 (38%), Gaps = 57/191 (29%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR--------- 181
           G  G  G  G PG +G PGP G+ G+ G+ G  G  G  GP GI G  GKR         
Sbjct: 578 GPPGPLGLTGRPGPLGDPGPSGLKGERGESGSAGPRGLLGPPGINGRPGKRGRAGADGGR 637

Query: 182 ------GPKGDMGYPGRIGLDGRDGLPGEPG---------------------LDGIPGRN 214
                 G KGD G+      DG  GLPG  G                      +G  G  
Sbjct: 638 GAPGETGTKGDRGF------DGLPGLPGNKGHRGDRGKPGPQGPGGEPGERGSNGPVGPR 691

Query: 215 GMDGIPGKDGL---------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           G  G PG  GL                G DG+PG+ G  G  G  GP G +G  G+ G+P
Sbjct: 692 GQPGEPGPRGLVGPRGPPGPPGQPGIQGTDGVPGSKGNPGPIGEMGPPGQQGNPGVQGLP 751

Query: 260 GTPAICAYKRE 270
           G   +     E
Sbjct: 752 GPQGLIGLPGE 762


>gi|403268670|ref|XP_003926392.1| PREDICTED: collagen alpha-1(IX) chain isoform 2 [Saimiri
           boliviensis boliviensis]
          Length = 678

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 104/208 (50%), Gaps = 48/208 (23%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M+G   +  E   PG QG  G++G+ G  GE+G +G               ++GEKG
Sbjct: 182 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 241

Query: 141 APGVVGPPGPQGIPG---DEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           A G+ G PGPQGIPG   D+G+R      GPKGD G  G +GIP   G  GPKGD G   
Sbjct: 242 ARGLDGEPGPQGIPGAPGDQGQRGPPGEAGPKGDRGAQGVRGIP---GLPGPKGDTGL-- 296

Query: 192 RIGLDGRDGLPGEP------------------GLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
             G+DG DG+PG P                  GL G+PG  G  G+ G+ G  G  G PG
Sbjct: 297 -AGVDGHDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 355

Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G +G+ G  GP G  G  G  G+PG+
Sbjct: 356 QMGNSGKPGQQGPPGEAGPRGPRGLPGS 383



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 82/184 (44%), Positives = 99/184 (53%), Gaps = 21/184 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG---PPGPQG------IPGDEGKRGP 162
           PG++G  G KGEIG  G  G KGE G++G  G VG   PPG QG      I GD+G++G 
Sbjct: 183 PGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGA 242

Query: 163 KGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G  G PGPQGIPG   D+G+RGP G+ G  G  G  G  G+PG PG  G  G  G+DG 
Sbjct: 243 RGLDGEPGPQGIPGAPGDQGQRGPPGEAGPKGDRGAQGVRGIPGLPGPKGDTGLAGVDG- 301

Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
                    DGIPG  GT GE G  GP G+ G  G+ GVPG P       E  S     +
Sbjct: 302 --------HDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGK 353

Query: 280 TSQL 283
             Q+
Sbjct: 354 PGQM 357



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 63/115 (54%), Gaps = 9/115 (7%)

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G+PG  G +G KG++G PG QG  G+EG      D G  G +G  G  G  G  G+ GI 
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 234

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
           G  G  G  G DG PG  GIPG  G  G++   G  GP+G+RG  G+ G+PG P 
Sbjct: 235 GDKGEKGARGLDGEPGPQGIPGAPGDQGQRGPPGEAGPKGDRGAQGVRGIPGLPG 289



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 81/159 (50%), Gaps = 12/159 (7%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G+ G  G +G+ G  GE G KG+RG +G          +GIPG  G +G  G  G
Sbjct: 248 EPGPQGIPGAPGDQGQRGPPGEAGPKGDRGAQGV---------RGIPGLPGPKGDTGLAG 298

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
             G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G  G
Sbjct: 299 VDGHDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMG 358

Query: 228 KDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G PG  G  GE G  GPR   G+RG+ G  G PG P 
Sbjct: 359 NSGKPGQQGPPGEAGPRGPRGLPGSRGEMGPVGSPGLPG 397



 Score = 46.2 bits (108), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 74/145 (51%), Gaps = 27/145 (18%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
           G+ G RG KGA G +G PG QG  G+EG +G  G++G    QG PG +G RG  G +G  
Sbjct: 181 GLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGA---QGPPGAQGLRGITGIVGDK 237

Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK--------- 241
           G  G  G DG PG              GIPG  G  G+ G PG  G  G++         
Sbjct: 238 GEKGARGLDGEPGP------------QGIPGAPGDQGQRGPPGEAGPKGDRGAQGVRGIP 285

Query: 242 GMTGPRGNRGKSGI---NGVPGTPA 263
           G+ GP+G+ G +G+   +G+PG P 
Sbjct: 286 GLPGPKGDTGLAGVDGHDGIPGMPG 310



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 47/80 (58%), Gaps = 6/80 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GLQG  G  G  GAKG   V GE+G  GAPG    PG  G  G  G++GP G+ G  GP+
Sbjct: 325 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEAGPRGPR 378

Query: 173 GIPGDEGKRGPKGDMGYPGR 192
           G+PG  G+ GP G  G PG+
Sbjct: 379 GLPGSRGEMGPVGSPGLPGK 398


>gi|193785087|dbj|BAG54240.1| unnamed protein product [Homo sapiens]
          Length = 470

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 83/192 (43%), Positives = 106/192 (55%), Gaps = 36/192 (18%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKG------EIGAKGEMGVKG---------ERGEKGAPG 143
           M+G   +  E   PG QG  G++G      E+GA+G  G +G         ++GEKGA G
Sbjct: 1   MRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARG 60

Query: 144 VVGPPGPQGIPG---DEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIG 194
           + G PGPQG+PG   D+G+RGP G+ G   P+G  G EG RG      PKGD G P   G
Sbjct: 61  LDGEPGPQGLPGAPGDQGQRGPPGEAG---PKGDRGAEGARGIPGLPGPKGDTGLP---G 114

Query: 195 LDGRDGLPGEPGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           +DGRDG+PG PG  G PG+       G+ G+PG  G+PG  G+ G  G+ G  G  G  G
Sbjct: 115 VDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMG 174

Query: 249 NRGKSGINGVPG 260
           N GK G  G PG
Sbjct: 175 NSGKPGQQGPPG 186



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 83/162 (51%), Gaps = 18/162 (11%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P GL G  G +G+ G  GE G KG+RG +GA G+ G P            GPKGD G
Sbjct: 64  EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP------------GPKGDTG 111

Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
            P   G  GIPG  G +G  G  G PG  GL G  G+PG PG  G+ G  G  G PGK G
Sbjct: 112 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 171

Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
             G  G PG  G  GE G  GP+   G+RG+ G  G PG P 
Sbjct: 172 QMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 213



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 66/123 (53%), Gaps = 21/123 (17%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG +G  G+KG  GA G   +MG  G+ G++G PG VGP GPQG+PG  G+ GP G  G 
Sbjct: 152 PGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGL 211

Query: 169 PGPQGIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
           PG  G+ G+ G +G +G               D+G P   G  G  G PGEPGL G  G 
Sbjct: 212 PGKLGVVGEPGPKGEQGASGEEGEAGERGELGDIGLP---GPKGSAGNPGEPGLRGPEGS 268

Query: 214 NGM 216
            G+
Sbjct: 269 RGL 271



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 63/128 (49%), Gaps = 24/128 (18%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           RG KGA G +G PG QG  G+EG +G  G++G    QG PG +G RG  G +G  G  G 
Sbjct: 2   RGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGA---QGPPGAQGLRGITGIVGDKGEKGA 58

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G DG   EPG  G+P                  G PG  G  G  G  GP+G+RG  G 
Sbjct: 59  RGLDG---EPGPQGLP------------------GAPGDQGQRGPPGEAGPKGDRGAEGA 97

Query: 256 NGVPGTPA 263
            G+PG P 
Sbjct: 98  RGIPGLPG 105



 Score = 42.7 bits (99), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 91/205 (44%), Gaps = 54/205 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGE------------------- 138
            + G      +  PPG  GP G +G  GA+G  G+ G +G+                   
Sbjct: 69  GLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 128

Query: 139 --------------KGAPGVVGPPGPQGIPGDEG------KRGPKGDMGYPGPQGIPGDE 178
                         +G PGV G PG +G+ G++G      K G  G+ G PG QG PG+ 
Sbjct: 129 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEV 188

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------------GLP 226
           G RGP+G  G  G +G  G  GLPG+ G+ G PG  G  G  G++            GLP
Sbjct: 189 GPRGPQGLPGSRGELGPVGSPGLPGKLGVVGEPGPKGEQGASGEEGEAGERGELGDIGLP 248

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRG 251
           G     G+ G  GE G+ GP G+RG
Sbjct: 249 GPK---GSAGNPGEPGLRGPEGSRG 270


>gi|30410850|gb|AAH51383.1| Col2a1 protein [Mus musculus]
          Length = 1419

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 80/198 (40%), Positives = 93/198 (46%), Gaps = 33/198 (16%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKG+ G  G++G+ GAPG  GP   PGP
Sbjct: 747 TGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGP 806

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKG---D 186
           QG  G  G +G +G  G PG  G PG  G                     K GPKG   D
Sbjct: 807 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDGPKGVRGD 866

Query: 187 MGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G PGR    GL G  G PGE G  G  G +G+DG PG  GL G+ GI G  G  GE+G 
Sbjct: 867 SGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGF 926

Query: 244 TGPRGNRGKSGINGVPGT 261
            G  G  G+ G  G PG 
Sbjct: 927 PGLPGPSGEPGKQGAPGA 944



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 88/189 (46%), Gaps = 39/189 (20%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 620 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPG 679

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G R               G KG++G
Sbjct: 680 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 739

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
            PG  G  G  G PGE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G
Sbjct: 740 PPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 799

Query: 249 NRGKSGING 257
             G  G  G
Sbjct: 800 PSGAPGPQG 808



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 85/193 (44%), Gaps = 48/193 (24%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYPGPQ 172
           GP G  G  GA+G  G +GE G  G  G  GPPG  G PG   D+G+ G KGD G PGPQ
Sbjct: 739 GPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQ 798

Query: 173 G---IPGDE------------GKRGPKGDMGYPGRIGL---------------------- 195
           G    PG +            G +GP G  G+PG  G                       
Sbjct: 799 GPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKD 858

Query: 196 --------DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                    G  G  G+PGL G  G  G  G PG DG  G DG PG  G  G++G+ G  
Sbjct: 859 GPKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLP 918

Query: 248 GNRGKSGINGVPG 260
           G RG+ G  G+PG
Sbjct: 919 GQRGERGFPGLPG 931



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 88/190 (46%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPK--------- 163
           GP+G KG+ G  G  G KG++G KG     GP GPQG P   G+EGKRG +         
Sbjct: 379 GPLGPKGQAGEPGIAGFKGDQGPKG---ETGPAGPQGAPGPAGEEGKRGARGEPGGAGPI 435

Query: 164 ---GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMD 217
              G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ 
Sbjct: 436 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTGPKGANGDPGRPGEPGLPGARGLT 495

Query: 218 GIPG---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG                             G PG  G PG  G NGE G  G +G  
Sbjct: 496 GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLA 555

Query: 251 GKSGINGVPG 260
           G  G+ G+PG
Sbjct: 556 GAPGLRGLPG 565



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 87/209 (41%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGDEGK------------- 159
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG +G              
Sbjct: 307 GEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 366

Query: 160 --------------------------------RGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                           +GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 367 GPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGEEGKRGAR 426

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 427 GEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTGPKGANGDPGR---P 483

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 484 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 512



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 682 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 735

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 736 GEVGPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQK---GDA 792

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 793 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 835



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 88/211 (41%), Gaps = 57/211 (27%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
           QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 783 QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGA 842

Query: 150 -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK---RGPKGDMGY 189
                            P+G+ GD G  G  GD G  GP G PG++G+    GP G  G 
Sbjct: 843 NGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGP 902

Query: 190 PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
           PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 903 PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 962

Query: 228 -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                ++G PG +G  G  G  G +G+RG++
Sbjct: 963 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 993



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 99/240 (41%), Gaps = 75/240 (31%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGE-- 138
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE  
Sbjct: 680 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 739

Query: 139 ----------KGAP---GVVGPPGPQGIP------------GDEGKRGPKGDMGYPGPQG 173
                     +GAP   G  GPPGP G              GD+G+ G KGD G PGPQG
Sbjct: 740 PPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQG 799

Query: 174 IPGDEGKRGP---------KGDMGYPGRIGLDG------------------------RDG 200
             G  G +GP         +G  G PG  G  G                        +DG
Sbjct: 800 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGANGNPGPAGPPGPAGKDG 859

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ GI G+PG
Sbjct: 860 PKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGLDGPPGPQGLAGQRGIVGLPG 919



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 95/213 (44%), Gaps = 45/213 (21%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P GL GP G  G+ G  GE G+ G RG  G PG  GP   QG  G  
Sbjct: 454 GLAGPKGAPGERGPSGLTGPKGANGDPGRPGEPGLPGARGLTGRPGDAGP---QGKVGPS 510

Query: 158 GK---------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG-- 200
           G                RG  G MG+PGP+G  G+ GK G KG  G PG  GL G+DG  
Sbjct: 511 GAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGET 570

Query: 201 ----------LPGEPGLDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTN 238
                       GE G  G PG +G  G+PG              G+PG+ G PG  G  
Sbjct: 571 GAAGPPGPSGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPR 630

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYK 268
           GE+G  G RG+ G  G+    G+PGTP     K
Sbjct: 631 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPK 663



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 619 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPP 678

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 679 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 738

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 739 GPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEA 786



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 75/192 (39%), Gaps = 60/192 (31%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G       +G PG+ G  GP G  G PG  GIPG +G       
Sbjct: 306 KGEAGPTGARGPEGAQGS------RGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 359

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GE    G  G PG  G 
Sbjct: 360 AGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGE 419

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGK 252
           +                     G PG  G PG+DG+ G  G  GE+   G+TGP+G  G 
Sbjct: 420 EGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTGPKGANGD 479

Query: 253 SGINGVPGTPAI 264
            G  G PG P  
Sbjct: 480 PGRPGEPGLPGA 491



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 90/226 (39%), Gaps = 84/226 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+             G +G+ 
Sbjct: 529 GQPGVMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQ 588

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QGIPG+ G  G   P+G+ G+PG        GL 
Sbjct: 589 GAPGPSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 648

Query: 197 GRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GKD 223
           G  GLPG PG D                     G+PG  G  GI             G +
Sbjct: 649 GPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 708

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 709 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGARGAPG 754



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 43/85 (50%), Gaps = 12/85 (14%)

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ GK G  G+ G PGPQG              G+PG  GL G  G  G PGLDG  G  
Sbjct: 187 GEAGKPGKSGERGLPGPQGA------------RGFPGTPGLPGVKGHRGYPGLDGAKGEA 234

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNG 239
           G  G+ G+ G PG++G PG  G  G
Sbjct: 235 GAPGVKGESGSPGENGSPGPMGPRG 259



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 83/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 216 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 275

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +G +G+ G PG  G 
Sbjct: 276 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGP 335

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 336 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGI 392

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 393 AGFKGDQGPKGETGPAGPQGAPG-PAGEEGKR 423



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 81/176 (46%), Gaps = 33/176 (18%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
            P GL GP G +G  G +G +G+ G+RGE+G PG+   PGP G PG               
Sbjct: 896  PSGLDGPPGPQGLAGQRGIVGLPGQRGERGFPGL---PGPSGEPGK-------------- 938

Query: 171  PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------ 224
             QG PG  G RGP G +G PG  G  G  G  G PG DG PGR+G  G+ G  G      
Sbjct: 939  -QGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGALG 997

Query: 225  ---------LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
                      PG  G  G  G  GE G  GP G  G +G  G+ G       KRES
Sbjct: 998  APGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIAGPQGPRGDKRES 1053


>gi|242007447|ref|XP_002424551.1| collagen alpha-1, IV, chain precursor, putative [Pediculus humanus
            corporis]
 gi|212507994|gb|EEB11813.1| collagen alpha-1, IV, chain precursor, putative [Pediculus humanus
            corporis]
          Length = 2525

 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/163 (42%), Positives = 91/163 (55%), Gaps = 17/163 (10%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  G  G  G  G KG  G+ G++G+ G+PG+VGPPGP    G  G +G  G  G PG +
Sbjct: 1754 GFAGAPGLPGMDGEKGFPGLPGQKGDTGSPGLVGPPGPV---GQVGPKGEPGRPGLPGSK 1810

Query: 173  GIPGDEGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLDGIP--------GRNGMDGIPG 221
            G PG   ++G KG+ G+P   G  GL G DG PG+ G  G+P        G  G DGIP 
Sbjct: 1811 GEPGLTSEKGQKGEPGFPGLRGAPGLKGADGFPGQKGDAGLPGIGRPGPKGDKGADGIP- 1869

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              GLPG DG+PG  G  G  G+ G +G++G +G  G+PG P  
Sbjct: 1870 --GLPGMDGLPGQKGDTGFPGLLGQKGDKGLAGAPGLPGLPGA 1910



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 122/264 (46%), Gaps = 66/264 (25%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIG------AKGEMGV---KGERGEKGAPGVVG 146
            L   +G   S     PPG  G +G KGE G      +KGE G+   KG++GE G PG+ G
Sbjct: 1773 LPGQKGDTGSPGLVGPPGPVGQVGPKGEPGRPGLPGSKGEPGLTSEKGQKGEPGFPGLRG 1832

Query: 147  PPG---PQGIPGDEG--------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
             PG     G PG +G        + GPKGD G  G  G+PG +G  G KGD G+PG +G 
Sbjct: 1833 APGLKGADGFPGQKGDAGLPGIGRPGPKGDKGADGIPGLPGMDGLPGQKGDTGFPGLLGQ 1892

Query: 196  DGRDGLPGEPGLDGIPGRN---------------GMDGIPGKDGLPGKDGI--------- 231
             G  GL G PGL G+PG +               G+ G+ G  G PG++G+         
Sbjct: 1893 KGDKGLAGAPGLPGLPGADGRPGEPGPPGLSGAPGLPGLKGDRGFPGREGLNGLKGERGP 1952

Query: 232  ---------PGTNGTNGEKGMTGP----RGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
                     PGT G  G++G  GP    +G++G+ G+ G+PG  A+     +  + LP +
Sbjct: 1953 GGAPGVVGFPGTPGEKGDRGPPGPVIDVKGDKGEPGLPGLPG--AVGEPGNQGIAGLPGA 2010

Query: 279  ETSQ-------LLIPPTIVGSEHI 295
            +  +       L  PP  VG    
Sbjct: 2011 KGERGSPGPAGLRGPPGFVGERGF 2034



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 108/223 (48%), Gaps = 31/223 (13%)

Query: 100  QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE-- 157
            +GF     +   PGL G  G  G  GAKG+ GV G  G KG PG  G PGPQG PG +  
Sbjct: 1684 RGFDGPKGDKGKPGLGGRPGAPGFPGAKGDRGVPGIDGPKGFPGPRGLPGPQGRPGVDGF 1743

Query: 158  -GKRGPKGDMGYPGPQGIPGDEGKR------GPKGDMGYPGRI------------GLDGR 198
             G +G KG+ G+ G  G+PG +G++      G KGD G PG +            G  GR
Sbjct: 1744 NGMKGDKGEAGFAGAPGLPGMDGEKGFPGLPGQKGDTGSPGLVGPPGPVGQVGPKGEPGR 1803

Query: 199  DGLP---GEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMT--GPRGNR 250
             GLP   GEPGL    G+ G  G PG  G P   G DG PG  G  G  G+   GP+G++
Sbjct: 1804 PGLPGSKGEPGLTSEKGQKGEPGFPGLRGAPGLKGADGFPGQKGDAGLPGIGRPGPKGDK 1863

Query: 251  GKSGINGVPGTPAICAYKRESC--SLLPNSETSQLLIPPTIVG 291
            G  GI G+PG   +   K ++    LL       L   P + G
Sbjct: 1864 GADGIPGLPGMDGLPGQKGDTGFPGLLGQKGDKGLAGAPGLPG 1906



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 102/226 (45%), Gaps = 53/226 (23%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERG-----------------EKGAPGVVGPPGPQGI 153
            P G  G  G+ G+ G  G +  KG++G                 EKG  G +GPPG  G+
Sbjct: 1576 PMGFPGEPGRDGQPGPPGPIAPKGQKGEPGIPGIGPPGPIGAPGEKGDRGPMGPPGKYGV 1635

Query: 154  ---PGDEGKRGPKGDMGYPGPQGIPG---------------------DEGKRGPKGDMGY 189
               PG  G +G KGD+G PG +G+PG                       G  GPKGD G 
Sbjct: 1636 NGAPGLPGAQGEKGDIGAPGLEGLPGMKGEPGEPGPIGPPGLPGQPGTRGFDGPKGDKGK 1695

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            PG  G  G  G PG  G  G+PG +G  G PG  GLPG  G PG +G NG K      G+
Sbjct: 1696 PGLGGRPGAPGFPGAKGDRGVPGIDGPKGFPGPRGLPGPQGRPGVDGFNGMK------GD 1749

Query: 250  RGKSGINGVPGTPAICAYKRESCSLLPNSE----TSQLLIPPTIVG 291
            +G++G  G PG P +   K      LP  +    +  L+ PP  VG
Sbjct: 1750 KGEAGFAGAPGLPGMDGEK--GFPGLPGQKGDTGSPGLVGPPGPVG 1793



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 103/236 (43%), Gaps = 50/236 (21%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG----------------- 155
            G +GP+G  G+ G  G  G+ G +GEKG    +G PG +G+PG                 
Sbjct: 1622 GDRGPMGPPGKYGVNGAPGLPGAQGEKGD---IGAPGLEGLPGMKGEPGEPGPIGPPGLP 1678

Query: 156  ----DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
                  G  GPKGD G PG  G PG  G  G KGD G P   G+DG  G PG  GL G  
Sbjct: 1679 GQPGTRGFDGPKGDKGKPGLGGRPGAPGFPGAKGDRGVP---GIDGPKGFPGPRGLPGPQ 1735

Query: 212  GRNGMD------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            GR G+D                  G+PG DG  G  G+PG  G  G  G+ GP G  G+ 
Sbjct: 1736 GRPGVDGFNGMKGDKGEAGFAGAPGLPGMDGEKGFPGLPGQKGDTGSPGLVGPPGPVGQV 1795

Query: 254  GINGVPGTPAICAYKRESCSLLPNSETSQLLIP--PTIVGSEHIFSSSPIVVREGD 307
            G  G PG P +   K E       SE  Q   P  P + G+  +  +     ++GD
Sbjct: 1796 GPKGEPGRPGLPGSKGEPGLT---SEKGQKGEPGFPGLRGAPGLKGADGFPGQKGD 1848



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 85/162 (52%), Gaps = 23/162 (14%)

Query: 119  GQKGEIGAKGEM----GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI 174
            G+KG+ G  G +    G KGE G  G PG VG PG QGI G  G +G +G  G  G +G 
Sbjct: 1966 GEKGDRGPPGPVIDVKGDKGEPGLPGLPGAVGEPGNQGIAGLPGAKGERGSPGPAGLRGP 2025

Query: 175  PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
            PG  G+RG KG+ G PG  GL G   + GE GL G+ G+NG DG  G  G  G+ G+PG 
Sbjct: 2026 PGFVGERGFKGEAGAPGVPGLPGLT-VKGEKGLPGLMGKNGRDGARGAPGEKGEPGLPGL 2084

Query: 235  NGT------------NGEKGMTGPRGNRGKSGINGVPGTPAI 264
             G              GEKG +GP       G NG+PG P +
Sbjct: 2085 QGVTGPPGPVGRPGLQGEKGDSGP------PGFNGLPGPPGL 2120



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 81/160 (50%), Gaps = 31/160 (19%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PGL G +G+ G  G  G  G KGERG  G  G+ GPPG        G+RG KG+ G PG 
Sbjct: 1990 PGLPGAVGEPGNQGIAGLPGAKGERGSPGPAGLRGPPG------FVGERGFKGEAGAPGV 2043

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------ 219
             G+PG       KG+ G PG +G +GRDG  G PG  G PG  G+ G+            
Sbjct: 2044 PGLPGLT----VKGEKGLPGLMGKNGRDGARGAPGEKGEPGLPGLQGVTGPPGPVGRPGL 2099

Query: 220  ---------PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                     PG +GLPG  G+ G  G +G  G+TG +G++
Sbjct: 2100 QGEKGDSGPPGFNGLPGPPGLKGERGADGYPGLTGEKGDQ 2139



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 89/174 (51%), Gaps = 30/174 (17%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDE 178
            +G++G  GE   KG+ GEKG+PG+ G PG  GIPG +G++G   KG+ G PG QG  GD+
Sbjct: 1433 QGDVGFPGE---KGDSGEKGSPGLDGAPGAYGIPGPKGEKGTSVKGEPGIPGRQGDKGDK 1489

Query: 179  GKRGPKGDMGYPGRI-------GLDGRDGLPGEP---------------GLDGIPGRNGM 216
            G+ G  G  G PG         GL G  G PGE                GL G+ G  G 
Sbjct: 1490 GEPGRYGPKGEPGLCPVQNITEGLKGNRGFPGEKGEPGPPGRPGWPGEKGLQGLRGEAGP 1549

Query: 217  DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
             G PG   +PG  G  G  G  G+KG TGP G  G+ G +G PG P   A K +
Sbjct: 1550 IGAPG---IPGPVGPRGLPGPRGDKGNTGPMGFPGEPGRDGQPGPPGPIAPKGQ 1600



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 86/206 (41%), Gaps = 65/206 (31%)

Query: 127  KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP--- 183
            KG  G++GE G  GAPG+ GP GP+G+PG  G +G  G MG+PG  G  G  G  GP   
Sbjct: 1538 KGLQGLRGEAGPIGAPGIPGPVGPRGLPGPRGDKGNTGPMGFPGEPGRDGQPGPPGPIAP 1597

Query: 184  ---KGD-----------------------MGYPGRIGLDGRDGLP---------GEPGLD 208
               KG+                       MG PG+ G++G  GLP         G PGL+
Sbjct: 1598 KGQKGEPGIPGIGPPGPIGAPGEKGDRGPMGPPGKYGVNGAPGLPGAQGEKGDIGAPGLE 1657

Query: 209  GIPGR---------------------------NGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
            G+PG                             G  G PG  G PG  G PG  G  G  
Sbjct: 1658 GLPGMKGEPGEPGPIGPPGLPGQPGTRGFDGPKGDKGKPGLGGRPGAPGFPGAKGDRGVP 1717

Query: 242  GMTGPRGNRGKSGINGVPGTPAICAY 267
            G+ GP+G  G  G+ G  G P +  +
Sbjct: 1718 GIDGPKGFPGPRGLPGPQGRPGVDGF 1743



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 83/186 (44%), Gaps = 61/186 (32%)

Query: 112  PGLQGPIGQKG------------EIGAKGEMGVKGERGEKGAPG---------------- 143
            PG QGP G +G              GA GE G KGE G +G PG                
Sbjct: 1177 PGEQGPRGPQGLTGGPGVPGRPGPEGAPGEKGAKGEPGLQGFPGGIGPRGYTGPPGPPGP 1236

Query: 144  ----------VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD--EGKRGPKGDMGYPG 191
                      +VGP G  G PG +G++G KG+ GY G +G+PGD  +G  GP G +G PG
Sbjct: 1237 KGVRGETGISIVGPKGMDGSPGADGEKGAKGEKGYAGLRGLPGDSLQGIPGPPGRVGAPG 1296

Query: 192  RIGLDGRDGLPG------------------EPGLDGIPGRNGMDGIPGK---DGLPGKDG 230
              G DGR G+PG                   PG+ G  G  G+DG+PG     G PG+ G
Sbjct: 1297 EKGTDGRPGVPGMPGERGQKGEMGGRCQNCAPGVRGEKGDRGVDGLPGAIGPRGPPGERG 1356

Query: 231  IPGTNG 236
             PG  G
Sbjct: 1357 FPGEPG 1362



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 79/168 (47%), Gaps = 30/168 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------GPPGPQGIP 154
            GL G +G+ G  GA+G  G KGE G  G  GV                   GPPG  G+P
Sbjct: 2056 GLPGLMGKNGRDGARGAPGEKGEPGLPGLQGVTGPPGPVGRPGLQGEKGDSGPPGFNGLP 2115

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDE------------GKRGPKGDMGYPGRIGLDGRDGLP 202
            G  G +G +G  GYPG  G  GD+            G +G +G  G+PG  G  G +G+P
Sbjct: 2116 GPPGLKGERGADGYPGLTGEKGDQGLPGVGGLPGEKGDQGEQGPPGFPGAKGDQGFNGIP 2175

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G  G  G+ G  G  G+PG DG  G+ G  G  G  G     GP+G+R
Sbjct: 2176 GAAGAPGMKGDKGSSGLPGIDGFVGQMGFKGDKGEPGLPPQQGPKGDR 2223



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 83/188 (44%), Gaps = 41/188 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPG-----PQGIPGDEGKRGPK 163
            PG +G  G  G  G +G  G  GERG   E GAPGV G PG      +G+PG  GK G  
Sbjct: 2008 PGAKGERGSPGPAGLRGPPGFVGERGFKGEAGAPGVPGLPGLTVKGEKGLPGLMGKNGRD 2067

Query: 164  GDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDGLPGEPGLD 208
            G  G PG +G PG  G +G                KGD G PG  GL G  GL GE G D
Sbjct: 2068 GARGAPGEKGEPGLPGLQGVTGPPGPVGRPGLQGEKGDSGPPGFNGLPGPPGLKGERGAD 2127

Query: 209  GIPG------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
            G PG                    G  G  G  G PG  G  G NG  G  G  G +G++
Sbjct: 2128 GYPGLTGEKGDQGLPGVGGLPGEKGDQGEQGPPGFPGAKGDQGFNGIPGAAGAPGMKGDK 2187

Query: 251  GKSGINGV 258
            G SG+ G+
Sbjct: 2188 GSSGLPGI 2195



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 93/247 (37%), Gaps = 98/247 (39%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------------- 153
            G  GP+GQKG+ G  G  G+ G  G+KG PGV G PGP G+                   
Sbjct: 1099 GPPGPVGQKGDRGFDGLNGLVGRPGQKGEPGVDGLPGPPGLRGIQGPPGGGKGRPGPPGP 1158

Query: 154  ------------------PGDEGKRGP---------------------KGDMGYPGPQGI 174
                              PG++G RGP                     KG  G PG QG 
Sbjct: 1159 AGPRGYPGPPGPKGLDGYPGEQGPRGPQGLTGGPGVPGRPGPEGAPGEKGAKGEPGLQGF 1218

Query: 175  PGD--------------------------------------EGKRGPKGDMGYPGRIGLD 196
            PG                                       +G++G KG+ GY G  GL 
Sbjct: 1219 PGGIGPRGYTGPPGPPGPKGVRGETGISIVGPKGMDGSPGADGEKGAKGEKGYAGLRGLP 1278

Query: 197  GR--DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G    G+PG PG  G PG  G DG PG  G+PG+ G  G  G   +    G RG +G  G
Sbjct: 1279 GDSLQGIPGPPGRVGAPGEKGTDGRPGVPGMPGERGQKGEMGGRCQNCAPGVRGEKGDRG 1338

Query: 255  INGVPGT 261
            ++G+PG 
Sbjct: 1339 VDGLPGA 1345



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 75/154 (48%), Gaps = 29/154 (18%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP--GVVGPPGPQGIPGDEGKRGPKGDMGY 168
            P G+ G  G  GE GAKGE G  G RG  G    G+ GPPG  G PG+      KG  G 
Sbjct: 1250 PKGMDGSPGADGEKGAKGEKGYAGLRGLPGDSLQGIPGPPGRVGAPGE------KGTDGR 1303

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            P   G+PG  G+RG KG+MG   +    G  G  G+ G+DG+PG  G  G PG+ G PG+
Sbjct: 1304 P---GVPGMPGERGQKGEMGGRCQNCAPGVRGEKGDRGVDGLPGAIGPRGPPGERGFPGE 1360

Query: 229  DG------------------IPGTNGTNGEKGMT 244
             G                  IPG  G  GEKG +
Sbjct: 1361 PGVDGIPGLPGPPGKPGKDGIPGAPGLQGEKGAS 1394



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 85/206 (41%), Gaps = 71/206 (34%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG+ G  GQKGE+G + +    G RGEKG  GV       G+PG  G RGP G+ G+PG 
Sbjct: 1307 PGMPGERGQKGEMGGRCQNCAPGVRGEKGDRGV------DGLPGAIGPRGPPGERGFPGE 1360

Query: 172  QG------------------IPGDEGKRGPKG---------------------------- 185
             G                  IPG  G +G KG                            
Sbjct: 1361 PGVDGIPGLPGPPGKPGKDGIPGAPGLQGEKGASYFVAENLVKGAKGEPGPRGPPGRQGS 1420

Query: 186  --------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG--LPGKD 229
                          D+G+PG  G  G     G PGLDG PG  G+ G  G+ G  + G+ 
Sbjct: 1421 PGPPGPPGFQGRQGDVGFPGEKGDSGEK---GSPGLDGAPGAYGIPGPKGEKGTSVKGEP 1477

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGI 255
            GIPG  G  G+KG  G  G +G+ G+
Sbjct: 1478 GIPGRQGDKGDKGEPGRYGPKGEPGL 1503



 Score = 46.2 bits (108), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 76/184 (41%), Gaps = 63/184 (34%)

Query: 113  GLQGPIGQKGEIGAKGEMGV------------------KGERGEKGAPGVVGPPGPQ--- 151
            GL GP G KGE GA G  G+                  KG++GE+G PG  G  G Q   
Sbjct: 2113 GLPGPPGLKGERGADGYPGLTGEKGDQGLPGVGGLPGEKGDQGEQGPPGFPGAKGDQGFN 2172

Query: 152  GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG---RIGLDGR---------- 198
            GIPG  G  G KGD G  G  GI G  G+ G KGD G PG   + G  G           
Sbjct: 2173 GIPGAAGAPGMKGDKGSSGLPGIDGFVGQMGFKGDKGEPGLPPQQGPKGDRGAPGFPGPP 2232

Query: 199  --------DGLPGEPGLDGIPGRNGMDGI---------------------PGKDGLPGKD 229
                    DG PG PG  G PGR G+DG+                     PG  GLPG  
Sbjct: 2233 GPPGLKGLDGAPGAPGPKGEPGRRGLDGLVGPIGPPGEPGVPGPPGYAGAPGAPGLPGDK 2292

Query: 230  GIPG 233
            G PG
Sbjct: 2293 GEPG 2296



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 100/232 (43%), Gaps = 42/232 (18%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQG 152
            L  +QG          PGLQG  G  G  G     G  G+KGERG  G PG+ G  G QG
Sbjct: 2081 LPGLQGVTGPPGPVGRPGLQGEKGDSGPPGFNGLPGPPGLKGERGADGYPGLTGEKGDQG 2140

Query: 153  IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
            +PG  G  G KGD G  GP G PG +G +G  G  G  G  G+ G  G  G PG+DG  G
Sbjct: 2141 LPGVGGLPGEKGDQGEQGPPGFPGAKGDQGFNGIPGAAGAPGMKGDKGSSGLPGIDGFVG 2200

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKSGING 257
            + G  G  G+ GLP + G  G  G                +G  G  GP+G  G+ G++G
Sbjct: 2201 QMGFKGDKGEPGLPPQQGPKGDRGAPGFPGPPGPPGLKGLDGAPGAPGPKGEPGRRGLDG 2260

Query: 258  V---------------------PGTPAICAYKRE---SCSLLPNSETSQLLI 285
            +                     PG P +   K E    C+  P+  +  LL+
Sbjct: 2261 LVGPIGPPGEPGVPGPPGYAGAPGAPGLPGDKGEPGQPCTRAPDYPSGILLV 2312


>gi|355748688|gb|EHH53171.1| hypothetical protein EGM_13752, partial [Macaca fascicularis]
          Length = 1140

 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 92/200 (46%), Gaps = 58/200 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  GP GQKGE    GE   KGE+G++G PG++G                       G 
Sbjct: 470 PGSVGPKGQKGE---PGEPFTKGEKGDRGEPGIIGSQGVKGEPGDPGPPGLIGSPGLKGQ 526

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK----------------GDMGYPGRIG 194
           QG  G  G RGP GD+G PG  GIPG +G +G K                G+ G PG+  
Sbjct: 527 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKS- 585

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGM 243
                 LPGEPGLDG PG  G  G  G+ GLPG             GIPG  G+ G  G 
Sbjct: 586 ------LPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPPGVGIPGRTGSQGPVGE 639

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            G +G RG  G+ G PGTP 
Sbjct: 640 PGIQGPRGLPGLPGTPGTPG 659



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 95/239 (39%), Gaps = 80/239 (33%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---PKGD--- 165
           PGL G  G++G  G+KGE G KGE+GEKG PG+ G  G  G+ GD G RG   PKG+   
Sbjct: 321 PGLPGQKGEQGFEGSKGETGEKGEQGEKGDPGLAGLNGENGLKGDLGPRGLPGPKGEKGD 380

Query: 166 ------------MGYPGPQGIPGDEGKRGP------------------------------ 183
                       +G  GPQG PG EG+RG                               
Sbjct: 381 TGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLGG 440

Query: 184 -----------------KGDMG------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                            KGD G      +PG +G  G+ G PGEP   G  G  G  GI 
Sbjct: 441 YYNKDNKGNDEHEAGGLKGDKGENGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGII 500

Query: 221 GKDGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G+ G+          G PG  G  G  G  GPRG  G  G+ G  G P     K E
Sbjct: 501 GSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGE 559



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 82/197 (41%), Gaps = 64/197 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  G +G KG+ G  GE   KGE+G++G PG++G                       G 
Sbjct: 467 PGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGIIGSQGVKGEPGDPGPPGLIGSPGLKGQ 526

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK-------------------------- 184
           QG  G  G RGP GD+G PG  GIPG +G +G K                          
Sbjct: 527 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKSL 586

Query: 185 -------GDMGYPGRIGLDGRDGLPG---------EPGLDGIPGRNGMDGIPGKDGLPGK 228
                  G+ G PG  G  G  GLPG          PG+ GIPGR G  G  G+ G+ G 
Sbjct: 587 PGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPPGV-GIPGRTGSQGPVGEPGIQGP 645

Query: 229 DGIPGTNGTNGEKGMTG 245
            G+PG  GT G  G  G
Sbjct: 646 RGLPGLPGTPGTPGNDG 662



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 68/147 (46%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG----------------EK 139
           L   QG   S     PPG    +G  GE G  G+ G+KGE+G                E 
Sbjct: 523 LKGQQGSAGSMGPRGPPG---DVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEA 579

Query: 140 GAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD-----------EGKRGPKGD 186
           G PG  + G PG  G PG  G RGPKG+ G PG  G PGD            G +GP G+
Sbjct: 580 GPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPPGVGIPGRTGSQGPVGE 639

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG+PGR
Sbjct: 640 PGIQGPRGLPGLPGTPGTPGNDGVPGR 666



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 69/145 (47%), Gaps = 24/145 (16%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPG---------------DEGKRGPKGDMGYPGPQ 172
           G MG+ G  G  G  G  GP GP GI G               + G+RGP GD+G+PGP+
Sbjct: 859 GAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGPE 918

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                    GP G  G  G+ G+ G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 919 ---------GPSGKPGINGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGERGKP 969

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G  GP GN+G  G  G
Sbjct: 970 GLTGMKGAIGPIGPPGNKGSMGSPG 994



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 78/168 (46%), Gaps = 33/168 (19%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A G  G KGE G  G PG VGP G +G PG+   +G KGD G PG  G  G +G+ G  G
Sbjct: 454 AGGLKGDKGENGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGIIGSQGVKGEPGDPG 513

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI-------------- 231
             G  G  GL G+ G  G  G  G PG  G+   PG+ G+PGK GI              
Sbjct: 514 PPGLIGSPGLKGQQGSAGSMGPRGPPGDVGL---PGEHGIPGKQGIKGEKGDPGGIIGPP 570

Query: 232 ----------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                           PG  G +G  G  GPRG +G+ G+ GV G+P 
Sbjct: 571 GLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPG 618



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 49/95 (51%), Gaps = 6/95 (6%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G PG    PG  G+   KGD G PG  GL G  GLPG+ G  G  G  G  G  G+
Sbjct: 291 KGEAGLPG---APGSPGQ---KGDKGEPGENGLHGAPGLPGQKGEQGFEGSKGETGEKGE 344

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G  G  G+ G NG NG KG  GPRG  G  G  G
Sbjct: 345 QGEKGDPGLAGLNGENGLKGDLGPRGLPGPKGEKG 379



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 65/125 (52%), Gaps = 24/125 (19%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KGE G  G  G  G++G+KG PG  G  G  G+PG       KG+ G+ G +G  G++G+
Sbjct: 291 KGEAGLPGAPGSPGQKGDKGEPGENGLHGAPGLPGQ------KGEQGFEGSKGETGEKGE 344

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---------------GIPGKDGL 225
           +G KGD   PG  GL+G +GL G+ G  G+PG  G                 GI G  G 
Sbjct: 345 QGEKGD---PGLAGLNGENGLKGDLGPRGLPGPKGEKGDTGPPGPPALPGSLGIQGPQGP 401

Query: 226 PGKDG 230
           PGK+G
Sbjct: 402 PGKEG 406



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 105/299 (35%), Gaps = 109/299 (36%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---------------- 143
           QGF  S  E    G QG  G  G  G  GE G+KG+ G +G PG                
Sbjct: 330 QGFEGSKGETGEKGEQGEKGDPGLAGLNGENGLKGDLGPRGLPGPKGEKGDTGPPGPPAL 389

Query: 144 --VVGPPGPQGIPGDEGKR----------------------------------------- 160
              +G  GPQG PG EG+R                                         
Sbjct: 390 PGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLGGYYNKDNKGN 449

Query: 161 ---------GPKGDMGYP------GPQGIPGDEGK---RGPKGDMGYPGRIGLDGRD--- 199
                    G KG+ G P      GP+G  G+ G+   +G KGD G PG IG  G     
Sbjct: 450 DEHEAGGLKGDKGENGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGIIGSQGVKGEP 509

Query: 200 ---------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------- 243
                    G PG  G  G  G  G  G PG  GLPG+ GIPG  G  GEKG        
Sbjct: 510 GDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGP 569

Query: 244 ---------TGPRGNR--GKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVG 291
                     GP G    G+ G++G PG P     K E    LP    S   I P  VG
Sbjct: 570 PGLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERG--LPGVHGSPGDIGPPGVG 626



 Score = 39.3 bits (90), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G++G+ G  G+ G +GERG+ G  G+ G  GP G PG+      KG MG PG 
Sbjct: 942 PGDRGPKGERGDQGIPGDRGPQGERGKPGLTGMKGAIGPIGPPGN------KGSMGSPGH 995

Query: 172 Q 172
           Q
Sbjct: 996 Q 996



 Score = 39.3 bits (90), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 33/69 (47%)

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE GL G PG  G  G  G+ G  G  G PG  G  GE+G  G +G  G+ G  G  G P
Sbjct: 292 GEAGLPGAPGSPGQKGDKGEPGENGLHGAPGLPGQKGEQGFEGSKGETGEKGEQGEKGDP 351

Query: 263 AICAYKRES 271
            +     E+
Sbjct: 352 GLAGLNGEN 360


>gi|119629725|gb|EAX09320.1| collagen, type VI, alpha 1, isoform CRA_a [Homo sapiens]
 gi|119629726|gb|EAX09321.1| collagen, type VI, alpha 1, isoform CRA_a [Homo sapiens]
          Length = 726

 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 97/213 (45%), Gaps = 63/213 (29%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPGL+G  G +GE   +G+ G+ GE+GE G PG  G  GP G  G +G++G +G+ G  G
Sbjct: 258 PPGLRGDPGFEGE---RGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRG 314

Query: 171 PQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGL---------------------PG 203
           P+G  G++GKR      G KG+MGYPG  G  G  G                       G
Sbjct: 315 PKGYKGEKGKRGIDGVDGVKGEMGYPGLPGCKGSPGFDGIQGPPGPKGDPGAFGLKGEKG 374

Query: 204 EPGLDGIPGRNGMDG------------------IPGKDGLPGKDGI-------------- 231
           EPG DG  GR G  G                    G +G PG DG               
Sbjct: 375 EPGADGEAGRPGSSGPSGDEGQPGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGERGPRG 434

Query: 232 -PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            PGT G  G+ G  GP+G++G+ G  GVPG P 
Sbjct: 435 TPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPG 467



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 79/187 (42%), Gaps = 52/187 (27%)

Query: 119 GQKGEIGAKGEMGVKGERGEKG---------------APGVVGPPGPQGIPGDE------ 157
           G+KGE GA GE G  G  G  G                 G  G PGP G PG+       
Sbjct: 371 GEKGEPGADGEAGRPGSSGPSGDEGQPGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGER 430

Query: 158 ------GKRGPKGDMGYPGPQ---------GIPGDEGKRGPKGDMGYPGRIGLDGRD--- 199
                 G RGP+GD G  GPQ         G+PGD G+ GP G  GY G  G  G +   
Sbjct: 431 GPRGTPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGSEGAR 490

Query: 200 ------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
                       GL GE G DG P  NG +G PG  G PG  G PG NGT G  G+ G  
Sbjct: 491 GAPGPAGPPGDPGLMGERGEDG-PAGNGTEGFPGFPGYPGNRGAPGINGTKGYPGLKGDE 549

Query: 248 GNRGKSG 254
           G  G  G
Sbjct: 550 GEAGDPG 556



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 75/149 (50%), Gaps = 18/149 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------GD 165
           PG +GP G  GE G +G+ G +G  G  G PG  GP GP+G  GDEG  G +      G 
Sbjct: 436 PGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGSEGARGAPGP 495

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G PG  G+ G+ G+ GP G+       G +G  G PG PG  G PG NG  G PG  G 
Sbjct: 496 AGPPGDPGLMGERGEDGPAGN-------GTEGFPGFPGYPGNRGAPGINGTKGYPGLKGD 548

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G+ G PG +  +       PRG +G  G
Sbjct: 549 EGEAGDPGDDNND-----IAPRGVKGAKG 572



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 59/131 (45%), Gaps = 25/131 (19%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------- 200
           PG +G  GD G+ GP+GD G  GP G+PGD G+ GP G  GY G  G  G +G       
Sbjct: 436 PGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGSEGARGAPGP 495

Query: 201 --------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                   L GE G DG P  NG +G           G PG  G  G  G+ G +G  G 
Sbjct: 496 AGPPGDPGLMGERGEDG-PAGNGTEGF---------PGFPGYPGNRGAPGINGTKGYPGL 545

Query: 253 SGINGVPGTPA 263
            G  G  G P 
Sbjct: 546 KGDEGEAGDPG 556


>gi|449268001|gb|EMC78883.1| Collagen alpha-2(V) chain, partial [Columba livia]
          Length = 1458

 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 90/165 (54%), Gaps = 15/165 (9%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
           E  P G  GP G +G IG  GE   +G+RG +G PG VGPPGP G  G  G RG  G  G
Sbjct: 442 EAGPKGEPGPQGPQGPIGPVGE---EGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGSDG 498

Query: 168 YPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G  G+ G  G PG
Sbjct: 499 LPGPKGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPG 558

Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
           +DG PG  G  G  G  G  G+ GP+G+       G++G  GVPG
Sbjct: 559 EDGRPGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 603



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 89/179 (49%), Gaps = 21/179 (11%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE------------- 157
           P G +GP GQ+GE G +G  G +G  G +G  G  G  GP G PG E             
Sbjct: 358 PRGPEGPQGQRGETGPQGPAGSQGLPGAEGTDGSPGAKGPTGSPGTEGPLGLSGPPGSPG 417

Query: 158 --GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP------GRIGLDGRDGLPGEPGLDG 209
             G  GP G  G PG  G+PG +G+ GPKG+ G        G +G +G+ G  G+PG  G
Sbjct: 418 PQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPQGPQGPIGPVGEEGKRGPRGDPGSVG 477

Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            PG  G  G PG  G PG DG+PG  G  GE+G  G  G +G  G  G PG P +   +
Sbjct: 478 PPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGAR 536



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 81/182 (44%), Gaps = 27/182 (14%)

Query: 94  IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
           I     +G    T    P G  GP G  GE G  G  G  G RG+ G PG  GP GP GI
Sbjct: 278 IGAAGAKGESGPTGAMGPTGPLGPRGMPGERGRIGPQGAPGGRGQHGMPGKPGPMGPLGI 337

Query: 154 ---------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                    PG +G+ GP G  G  GPQG  G+ G +GP G  G P   G +G DG PG 
Sbjct: 338 TGSPGFPGAPGVKGEAGPTGPRGPEGPQGQRGETGPQGPAGSQGLP---GAEGTDGSPGA 394

Query: 205 PGLDGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            G  G PG                 G  G PG  G PG  G+PG  G  G KG  GP+G 
Sbjct: 395 KGPTGSPGTEGPLGLSGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAGPKGEPGPQGP 454

Query: 250 RG 251
           +G
Sbjct: 455 QG 456



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 89/180 (49%), Gaps = 24/180 (13%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL+G  G KGEIGA    G KGE G  GA G  GP GP+G+PG+ G+ GP+G  G  G  
Sbjct: 267 GLKGLDGPKGEIGA---AGAKGESGPTGAMGPTGPLGPRGMPGERGRIGPQGAPGGRGQH 323

Query: 173 GIPGDEGKRGP---KGDMGYPGRIGLDGRDGL------------------PGEPGLDGIP 211
           G+PG  G  GP    G  G+PG  G+ G  G                    G  G  G+P
Sbjct: 324 GMPGKPGPMGPLGITGSPGFPGAPGVKGEAGPTGPRGPEGPQGQRGETGPQGPAGSQGLP 383

Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G  G DG PG  G  G  G  G  G +G  G  GP+G+ G  GI G PG P +  +K E+
Sbjct: 384 GAEGTDGSPGAKGPTGSPGTEGPLGLSGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEA 443



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 77/153 (50%), Gaps = 18/153 (11%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL+G  G KG  G KGE+G  G +GE G  G +GP GP G                  P
Sbjct: 260 PGLKGHRGLKGLDGPKGEIGAAGAKGESGPTGAMGPTGPLG------------------P 301

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +G+PG+ G+ GP+G  G  G+ G+ G+ G  G  G+ G PG  G  G+ G+ G  G  G 
Sbjct: 302 RGMPGERGRIGPQGAPGGRGQHGMPGKPGPMGPLGITGSPGFPGAPGVKGEAGPTGPRGP 361

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
            G  G  GE G  GP G++G  G  G  G+P  
Sbjct: 362 EGPQGQRGETGPQGPAGSQGLPGAEGTDGSPGA 394



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 93/202 (46%), Gaps = 45/202 (22%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP G   P G P
Sbjct: 498 GLPGPKGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 557

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G++G+ GP G +G    +G PG  G  GPKG  G PG+ G  G  G+PG+    G PG++
Sbjct: 558 GEDGRPGPAGSIGI---RGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQ---RGAPGKD 611

Query: 215 G------------MDGIPGKDGLPGK---------------------DGIPGTNGTNGEK 241
           G            + G  G+ G PG                       G+PG  G  G  
Sbjct: 612 GEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPL 671

Query: 242 GMTGPRGN---RGKSGINGVPG 260
           G  G RGN   RG+ G +G+PG
Sbjct: 672 GPRGERGNPGERGEPGASGLPG 693



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 83/168 (49%), Gaps = 30/168 (17%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK G  G+ G 
Sbjct: 542 PGVQGPEGKLGPLGAPGEDGRPGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 601

Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
           PG +G PG +G+             G +G+ G PG  G  G                 G+
Sbjct: 602 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 661

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG+PG  G  G  G  G PG+ G PG  G+PG  G  G  G  GP+G+
Sbjct: 662 PGDPGAVGPLGPRGERGNPGERGEPGASGLPGEKGMAGGHGPDGPKGS 709



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 70/139 (50%), Gaps = 9/139 (6%)

Query: 128 GEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           GE G  G+ GE G PG  GP   PG  G+PG +G RG KG  G  G  G  G +G+ GP 
Sbjct: 231 GEPGRPGQSGEPGFPGSPGPRGFPGAPGLPGLKGHRGLKGLDGPKGEIGAAGAKGESGPT 290

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDGIPGTNGTN 238
           G MG  G +G  G  G  G  G  G PG  G  G+PGK G      + G  G PG  G  
Sbjct: 291 GAMGPTGPLGPRGMPGERGRIGPQGAPGGRGQHGMPGKPGPMGPLGITGSPGFPGAPGVK 350

Query: 239 GEKGMTGPRGNRGKSGING 257
           GE G TGPRG  G  G  G
Sbjct: 351 GEAGPTGPRGPEGPQGQRG 369



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 71/139 (51%), Gaps = 12/139 (8%)

Query: 113 GLQGPIGQKGEIGAKG---------EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           G  GP+G++G  G +G           G +GERG  G+    GP G QG PG  G+ G  
Sbjct: 477 GPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPAGS---SGPKGGQGDPGRPGEPGLP 533

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G  G  G+ G EGK GP G  G  GR G  G  G+ G+PG  G+PG  G  G PGK 
Sbjct: 534 GARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPAGSIGIRGQPGSMGLPGPKGSSGDPGKP 593

Query: 224 GLPGKDGIPGTNGTNGEKG 242
           G  G  G+PG  G  G+ G
Sbjct: 594 GEAGNAGVPGQRGAPGKDG 612



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 73/149 (48%), Gaps = 18/149 (12%)

Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGD------------EGKRGPKGDMGYP------GPQ 172
           G  G  G+ G PG  G PGP+G PG             +G  GPKG++G        GP 
Sbjct: 231 GEPGRPGQSGEPGFPGSPGPRGFPGAPGLPGLKGHRGLKGLDGPKGEIGAAGAKGESGPT 290

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G  G  GP+G  G  GRIG  G  G  G+ G+ G PG  G  GI G  G PG  G+ 
Sbjct: 291 GAMGPTGPLGPRGMPGERGRIGPQGAPGGRGQHGMPGKPGPMGPLGITGSPGFPGAPGVK 350

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           G  G  G +G  GP+G RG++G  G  G+
Sbjct: 351 GEAGPTGPRGPEGPQGQRGETGPQGPAGS 379



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 3/109 (2%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  GP G +G +G KG  G  G  G +G PG +GP GP G  G++G+ GP+G +G PG +
Sbjct: 735 GTPGPKGDRGGVGEKGAEGTAGNDGARGLPGPIGPMGPAGPTGEKGEPGPRGLVGPPGSR 794

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
           G PG  G+ GP G +G+ G  G DG+ G+ GEPG    PG+ G  G PG
Sbjct: 795 GNPGSRGENGPTGAVGFAGPPGPDGQPGVKGEPGE---PGQKGDAGSPG 840



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 72/148 (48%), Gaps = 24/148 (16%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----------- 167
           G+ GA G +G +GERG   E+G PG  G PG +G+ G  G  GPKG  G           
Sbjct: 663 GDPGAVGPLGPRGERGNPGERGEPGASGLPGEKGMAGGHGPDGPKGSPGPSGTPGDPGPP 722

Query: 168 ----YPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                PG +GI   PG +G RG  G+ G  G  G DG  GLPG  G  G  G  G  G P
Sbjct: 723 GLQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGPIGPMGPAGPTGEKGEP 782

Query: 221 GKDGL---PGKDGIPGTNGTNGEKGMTG 245
           G  GL   PG  G PG+ G NG  G  G
Sbjct: 783 GPRGLVGPPGSRGNPGSRGENGPTGAVG 810



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 68/142 (47%), Gaps = 15/142 (10%)

Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD-------- 186
           ++G  G PG VGP GP+G  G+ G+RG  G  G PG +G+ G  G  GPKG         
Sbjct: 658 DQGVPGDPGAVGPLGPRGERGNPGERGEPGASGLPGEKGMAGGHGPDGPKGSPGPSGTPG 717

Query: 187 -------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
                   G PG  G+ G  G  G+ G  G  G  G  G  G  GLPG  G  G  G  G
Sbjct: 718 DPGPPGLQGMPGERGIAGTPGPKGDRGGVGEKGAEGTAGNDGARGLPGPIGPMGPAGPTG 777

Query: 240 EKGMTGPRGNRGKSGINGVPGT 261
           EKG  GPRG  G  G  G PG+
Sbjct: 778 EKGEPGPRGLVGPPGSRGNPGS 799


>gi|224044919|ref|XP_002196734.1| PREDICTED: collagen alpha-2(I) chain [Taeniopygia guttata]
          Length = 1364

 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 83/149 (55%), Gaps = 12/149 (8%)

Query: 121  KGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
            +G +GA G +G+ G RGE+G PG+    G PGP G+ G  G RGP G +G PGP G PG+
Sbjct: 863  QGILGAPGILGLPGSRGERGLPGISGATGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGE 922

Query: 178  EGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLD---GIPGRNGM---DGIPGKDGLPGK 228
             G+ G  G+ G PGR    G  G  G PG PG     G PG +G     G PG  G PG 
Sbjct: 923  AGRDGNPGNDGPPGRDGAPGFKGERGAPGSPGPSGALGAPGPHGQVGPSGKPGNRGEPGP 982

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G  G  G +G+ GP+G RG+ G+ G
Sbjct: 983  AGAVGPAGAFGPRGLAGPQGARGEKGLPG 1011



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 86/162 (53%), Gaps = 6/162 (3%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L+  +G         P G +GP+G  G  G  G +G  G RGE   PG +G PGP+G  G
Sbjct: 445 LMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGE---PGNIGFPGPKGPTG 501

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN- 214
           + GK G KG++G  GP+G PG EG  G +G  G  G  G  G  G  G PG  G+PG + 
Sbjct: 502 EPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSG 561

Query: 215 --GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PG+ GL G+ G+PG  G  GE+G  G  G  G +G
Sbjct: 562 PAGEAGKPGERGLHGEFGVPGPAGPRGERGPPGESGAVGPAG 603



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 80/161 (49%), Gaps = 18/161 (11%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAP------------GVVGPPGPQGIPGDEGKRG-P 162
           GP+G+ GE G  G  G  GE+G  G              G++G PG  G+PG  G+RG P
Sbjct: 825 GPVGRTGEQGIAGPPGFAGEKGPSGEAGAAGPPGTPGPQGILGAPGILGLPGSRGERGLP 884

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
              G  G PGP G+ G  G RGP G +G PG  G  G  G  G PG DG PGR+G  G  
Sbjct: 885 GISGATGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGRDGNPGNDGPPGRDGAPGFK 944

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGV 258
           G+ G PG  G  G  G  G  G  GP    GNRG+ G  G 
Sbjct: 945 GERGAPGSPGPSGALGAPGPHGQVGPSGKPGNRGEPGPAGA 985



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 89/186 (47%), Gaps = 24/186 (12%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
             + G   +     P G +GP G  G  G  G MG +G  G+ G+PG  G  GP G PG 
Sbjct: 413 AGVMGPAGNRGASGPVGAKGPNGDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGA 472

Query: 157 EGKRGP---------KGDMGYPGPQGIPGDEGKRGPKGDM------GYPGRIGLDGRDGL 201
           +G+ GP          G++G+PGP+G  G+ GK G KG++      G PG  G +G  G 
Sbjct: 473 DGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGP 532

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRGNRGK 252
           PG  G  G  G  G  G PG  GLPG  G  G  G  GE+G+          GPRG RG 
Sbjct: 533 PGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGERGP 592

Query: 253 SGINGV 258
            G +G 
Sbjct: 593 PGESGA 598



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 81/170 (47%), Gaps = 6/170 (3%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G   S     P GL+G  G +G  GA G  GV G  G +GA G VG  GP G  G  G+ 
Sbjct: 384 GEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPNGDAGRPGEP 443

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G  G PG  G PG  GK GP G  G  GR+G  G  G  GEPG  G PG  G  G P
Sbjct: 444 GLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEP 503

Query: 221 GKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           GK       GL G  G PG  G NG +G  G  GN+G  G  G  G P  
Sbjct: 504 GKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGF 553



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 82/163 (50%), Gaps = 15/163 (9%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
             + G   +T E  P G+ GP G +G    +G+ G  G  GE G  G PG  GPPG  G P
Sbjct: 882  GLPGISGATGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGRDGNPGNDGPPGRDGAP 941

Query: 155  GDEGKRG------PKGDMGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G +G+RG      P G +G PGP       G PG+ G+ GP G +G  G  G  G  G  
Sbjct: 942  GFKGERGAPGSPGPSGALGAPGPHGQVGPSGKPGNRGEPGPAGAVGPAGAFGPRGLAGPQ 1001

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G  G  G+PG  G  G+PG  G  G  G+PG  G +G++G  G
Sbjct: 1002 GARGEKGLPGDKGPRGLPGLKGHNGLQGLPGLAGQHGDQGPPG 1044



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 87/180 (48%), Gaps = 27/180 (15%)

Query: 113 GLQGPIGQKGEIGAKGEM------------GVKGERGEKGAPGVVGPPGPQGIPGDEG-- 158
           G  GP G +GEIG  G              G+ G +G  G PGV G PG   +PG  G  
Sbjct: 273 GPSGPAGPRGEIGLPGSSGPVGPPGNPGANGLPGAKGAAGLPGVAGAPG---LPGPRGIL 329

Query: 159 -------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI---GLDGRDGLPGEPGLD 208
                    G +G +G PGP G  G+ G +G  G  G  G     G +G+ G PGEPG  
Sbjct: 330 GPPGPAGPSGARGLVGEPGPAGAKGESGMKGEPGAAGPAGPPGPSGEEGKRGSPGEPGSA 389

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G PG  G+ G+PG  GLPG DG  G  G  G +G +GP G +G +G  G PG P +   +
Sbjct: 390 GPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPNGDAGRPGEPGLMGPR 449



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 58/101 (57%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
           PG  G PG+ G  GP+G  G+PG  G+PG +G RG  G  G  G+ G  G  G PG PG 
Sbjct: 146 PGKPGRPGERGVAGPQGARGFPGTPGLPGFKGIRGHNGLDGQKGQPGTPGTKGEPGAPGE 205

Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
           +G PG+ G  G+PG+ G  G  G  G  G++G  G TGP G
Sbjct: 206 NGTPGQPGARGLPGERGRVGAPGPAGARGSDGSAGPTGPAG 246



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 66/148 (44%), Gaps = 42/148 (28%)

Query: 155 GDEGKR------------GPKGDMGYPGPQGIPGDEGK------------------RGPK 184
           G+EGKR            GP G  G PG +G+PG +G+                  +GP 
Sbjct: 375 GEEGKRGSPGEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPN 434

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------------PGKDGIP 232
           GD G PG  GL G  GLPG+PG  G  G+ G  G PG DG             PG  G P
Sbjct: 435 GDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFP 494

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  GE G  G +GN G +G  G PG
Sbjct: 495 GPKGPTGEPGKPGEKGNVGLAGPRGAPG 522



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 76/157 (48%), Gaps = 33/157 (21%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---------------MGYP 169
           G +G++G  G  GE+G   + GPPG        G++GP G+               +G P
Sbjct: 819 GLRGDVGPVGRTGEQG---IAGPPG------FAGEKGPSGEAGAAGPPGTPGPQGILGAP 869

Query: 170 GPQGIPGDEGKRG-P--KGDMGYPGRIGLDGRDGLP------GEPGLDGIPGRNGMDGIP 220
           G  G+PG  G+RG P   G  G PG +G+ G  G        G PG +G PG  G DG P
Sbjct: 870 GILGLPGSRGERGLPGISGATGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGRDGNP 929

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           G DG PG+DG PG  G  G  G  GP G  G  G +G
Sbjct: 930 GNDGPPGRDGAPGFKGERGAPGSPGPSGALGAPGPHG 966



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 50/94 (53%), Gaps = 9/94 (9%)

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           G+PG  G PG+ G  GP+G  G+PG  GL         PG  GI G NG+DG  G+ G P
Sbjct: 144 GHPGKPGRPGERGVAGPQGARGFPGTPGL---------PGFKGIRGHNGLDGQKGQPGTP 194

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G PG  G NG  G  G RG  G+ G  G PG
Sbjct: 195 GTKGEPGAPGENGTPGQPGARGLPGERGRVGAPG 228



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 90/222 (40%), Gaps = 72/222 (32%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------------G 146
           P G  GP G  G+ GAKGE G KG +GE G  G +                        G
Sbjct: 721 PSGFAGPPGAAGQPGAKGERGPKGPKGETGPTGAIGPVGASGPPGPAGAAGPAGPRGDAG 780

Query: 147 PPGPQGIPGDEGK------------------------RGPKGD---MGYPGPQGI---PG 176
           PPG  G PG  G+                        RG +GD   +G  G QGI   PG
Sbjct: 781 PPGMTGFPGAAGRVGPPGPAGITGPPGPPGPAGKDGPRGLRGDVGPVGRTGEQGIAGPPG 840

Query: 177 DEGKRGPKGD---------------MGYPGRIGLD---GRDGLPGEPGLDGIPGRNGMDG 218
             G++GP G+               +G PG +GL    G  GLPG  G  G PG  G+ G
Sbjct: 841 FAGEKGPSGEAGAAGPPGTPGPQGILGAPGILGLPGSRGERGLPGISGATGEPGPLGVSG 900

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG  G  G  G PG NG  GE G  G  GN G  G +G PG
Sbjct: 901 PPGARGPSGPVGSPGPNGAPGEAGRDGNPGNDGPPGRDGAPG 942



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 66/154 (42%), Gaps = 33/154 (21%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G+ G  GE GV G +G +G PG  G PG +GI G  G  G KG  G PG +G P   
Sbjct: 144 GHPGKPGRPGERGVAGPQGARGFPGTPGLPGFKGIRGHNGLDGQKGQPGTPGTKGEP--- 200

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
                          G  G +G PG+PG  G+PG  G  G PG  G  G DG  G  G  
Sbjct: 201 ---------------GAPGENGTPGQPGARGLPGERGRVGAPGPAGARGSDGSAGPTGPA 245

Query: 239 G---------------EKGMTGPRGNRGKSGING 257
           G                KG  GP GN G SG  G
Sbjct: 246 GPIGAAGPPGFPGAPGAKGEIGPAGNVGPSGPAG 279



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           DG  G PG PG  G+ G  G  G PG  GLPG  GI G NG +G+KG  G  G +G+ G 
Sbjct: 143 DGHPGKPGRPGERGVAGPQGARGFPGTPGLPGFKGIRGHNGLDGQKGQPGTPGTKGEPGA 202

Query: 256 ---NGVPGTPAICAYKRE 270
              NG PG P       E
Sbjct: 203 PGENGTPGQPGARGLPGE 220



 Score = 42.7 bits (99), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 66/151 (43%), Gaps = 45/151 (29%)

Query: 113 GLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL GP G    +G  GA+G  GV G +G KG  G  GPPG QG+PG  G   P G+ G P
Sbjct: 513 GLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSG---PAGEAGKP 569

Query: 170 GPQGIPGD---EGKRGPKGDMGYPGRIGL------------------DGRDGLPG----- 203
           G +G+ G+    G  GP+G+ G PG  G                   DG  G PG     
Sbjct: 570 GERGLHGEFGVPGPAGPRGERGPPGESGAVGPAGPIGSRGPSGPPGPDGNKGEPGNVGAA 629

Query: 204 -------------EPGLDGIPGRNGMDGIPG 221
                        E G+ G+PG  G  G PG
Sbjct: 630 GAPGPAGPGGIPGERGVAGVPGGKGEKGAPG 660



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 81/207 (39%), Gaps = 78/207 (37%)

Query: 132 VKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKG------------------------ 164
           + GERGE G   P G  GPPG  G PG +G+RGPKG                        
Sbjct: 709 IPGERGEPGPVGPSGFAGPPGAAGQPGAKGERGPKGPKGETGPTGAIGPVGASGPPGPAG 768

Query: 165 ---------DMGYPGPQGIPGDEGK------------------------RGPKGDMGYPG 191
                    D G PG  G PG  G+                        RG +GD+G  G
Sbjct: 769 AAGPAGPRGDAGPPGMTGFPGAAGRVGPPGPAGITGPPGPPGPAGKDGPRGLRGDVGPVG 828

Query: 192 RIGLDGRDGLPGEPGLDGIPGR------------NGMDGIPGKDGLP---GKDGIPGTNG 236
           R G  G  G PG  G  G  G              G+ G PG  GLP   G+ G+PG +G
Sbjct: 829 RTGEQGIAGPPGFAGEKGPSGEAGAAGPPGTPGPQGILGAPGILGLPGSRGERGLPGISG 888

Query: 237 TNGEK---GMTGPRGNRGKSGINGVPG 260
             GE    G++GP G RG SG  G PG
Sbjct: 889 ATGEPGPLGVSGPPGARGPSGPVGSPG 915



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 73/168 (43%), Gaps = 39/168 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---ERGEKGAPGVVGPPGPQGIPGDEGKRGP------ 162
           PG +G  G  GE G  G+ G +G   ERG  GAPG  G  G  G  G  G  GP      
Sbjct: 194 PGTKGEPGAPGENGTPGQPGARGLPGERGRVGAPGPAGARGSDGSAGPTGPAGPIGAAGP 253

Query: 163 ---------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGL 207
                    KG++   GP G  G  G  GP+G++G PG        G  G +GLPG  G 
Sbjct: 254 PGFPGAPGAKGEI---GPAGNVGPSGPAGPRGEIGLPGSSGPVGPPGNPGANGLPGAKGA 310

Query: 208 DGIPGRNGMDGIPGKDGL------------PGKDGIPGTNGTNGEKGM 243
            G+PG  G  G+PG  G+             G  G PG  G  GE GM
Sbjct: 311 AGLPGVAGAPGLPGPRGILGPPGPAGPSGARGLVGEPGPAGAKGESGM 358


>gi|56270269|gb|AAH86874.1| COL5A2 protein [Homo sapiens]
          Length = 1139

 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 88/158 (55%), Gaps = 6/158 (3%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL+G  G KG  G KGE+G  G +GE G  G +G PG  G PG  G+RG  G+ G+PG 
Sbjct: 113 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGDPGTVGPPGPVGERGAPGNRGFPGS 172

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGL 225
            G+PG +G +G +G +G  G  G  G  G PGEPGL G       PG  G +G  G  G 
Sbjct: 173 DGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGA 232

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG+DG PG  G+ G +G  G  G  G  G +G PG P 
Sbjct: 233 PGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPG 270



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 387 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 446

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 447 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 505

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 506 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 553



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/127 (43%), Positives = 67/127 (52%), Gaps = 6/127 (4%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------PKGDMGYPGRIGLDGRDGL 201
           PG  G PG+ G  G  G  G+PG  G+PG +G RG      PKG++G PG  G  G  G 
Sbjct: 86  PGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGP 145

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+PG  G PG  G  G PG  G PG DG+PG  G  GE+G  G  G +G  G  G PG 
Sbjct: 146 MGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGE 205

Query: 262 PAICAYK 268
           P +   +
Sbjct: 206 PGLPGAR 212



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 218 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 277

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 278 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 337

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 338 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 397

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 398 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 430



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 88/179 (49%), Gaps = 16/179 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP--------- 169
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G P         
Sbjct: 84  GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 143

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG--IP-GRNGMDGIPGKDGLP 226
           GP G PG  G  GP G+ G PG  G  G DGLPG  G  G   P G +G  G  G  G P
Sbjct: 144 GPMGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRP 203

Query: 227 GKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G+ G+PG  G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 204 GEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 262



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
            G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 629 TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 682

Query: 166 MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 683 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 742

Query: 220 PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 743 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 786



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP         E
Sbjct: 174 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGP---------E 224

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK GP G  G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    
Sbjct: 225 GKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR--- 281

Query: 218 GIPGKDG 224
           G PGKDG
Sbjct: 282 GAPGKDG 288



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 341 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 400

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 401 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 460

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 461 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 507



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 50/90 (55%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 698 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 757

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
           +G+PG +G RG KGD G  G  G  G  G 
Sbjct: 758 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 787



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 21/117 (17%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------G 173
           +KGE G +               G+VGPPG +G PG  G+ GP G +G+ GPQ      G
Sbjct: 454 EKGEPGPR---------------GLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPG 498

Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
           + G+ G+ G KGD G PG  GL G  G  G  G+ G+ G  G  G PG  G PG  G
Sbjct: 499 VKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAG 555



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 466 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 525

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 526 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 585

Query: 210 IPGRNG 215
            PG +G
Sbjct: 586 DPGSHG 591


>gi|345778515|ref|XP_538993.3| PREDICTED: collagen alpha-1(XIX) chain [Canis lupus familiaris]
          Length = 1139

 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 91/200 (45%), Gaps = 55/200 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  G IG KG+ G  GE   KGE+G++G PG++G                       G 
Sbjct: 464 PGFPGSIGPKGQKGESGESLSKGEKGDRGEPGLIGSQGIKGEPGDPGPPGLIGSPGLKGQ 523

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK----------------GDMGYPGRIG 194
           +G  G  G RGP GD G PG  GIPG +G +G K                G+ G PG+  
Sbjct: 524 EGPAGSMGPRGPPGDTGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKS- 582

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGM 243
                 LPGEPGLDG PG  G  G  G+ GLPG             G+PG  G+ G  G 
Sbjct: 583 ------LPGEPGLDGNPGTPGPRGPKGERGLPGVHGSPGDRGPPGVGVPGRTGSQGPAGE 636

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            G +G RG  G+ G PGTP 
Sbjct: 637 PGIQGPRGLPGLPGTPGTPG 656



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 88/176 (50%), Gaps = 38/176 (21%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG---PQGI- 174
           G  GE GA G  G KGE G+ G PG +GP G +G  G+   +G KGD G PG    QGI 
Sbjct: 444 GNLGEYGAHGPKGEKGETGQPGFPGSIGPKGQKGESGESLSKGEKGDRGEPGLIGSQGIK 503

Query: 175 --------------PGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDG-------- 209
                         PG +G+ GP G MG    PG  GL G  G+PG+ G+ G        
Sbjct: 504 GEPGDPGPPGLIGSPGLKGQEGPAGSMGPRGPPGDTGLPGEHGIPGKQGIKGEKGDPGGI 563

Query: 210 -----IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                +PG  G  G PGK  LPG+ G+ G  GT G +   GP+G RG  G++G PG
Sbjct: 564 IGPPGLPGPKGEAGPPGKS-LPGEPGLDGNPGTPGPR---GPKGERGLPGVHGSPG 615



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 78/145 (53%), Gaps = 15/145 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G +G  G+KG+RG  G PG+ G       PGP G+PG+ G RGP GD+G+PGP+
Sbjct: 857 GAMGLPGLEGFPGIKGDRGPAGPPGIAGISGKPGAPGPPGVPGEPGDRGPVGDIGFPGPE 916

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                    GP G  G  G+ GL G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 917 ---------GPSGKPGINGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGEQGKP 967

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G  GP GN+G +G  G
Sbjct: 968 GLPGMKGAIGPVGPPGNKGSTGSPG 992



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 66/147 (44%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG----------------EK 139
           L   +G   S     PPG     G  GE G  G+ G+KGE+G                E 
Sbjct: 520 LKGQEGPAGSMGPRGPPGD---TGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEA 576

Query: 140 GAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-----------KRGPKGD 186
           G PG  + G PG  G PG  G RGPKG+ G PG  G PGD G            +GP G+
Sbjct: 577 GPPGKSLPGEPGLDGNPGTPGPRGPKGERGLPGVHGSPGDRGPPGVGVPGRTGSQGPAGE 636

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG PGR
Sbjct: 637 PGIQGPRGLPGLPGTPGTPGNDGAPGR 663



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 62/135 (45%), Gaps = 36/135 (26%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
           PG  G+PG EG  G KGD G  GP GI G               + G RGP GD+G+PG 
Sbjct: 856 PGAMGLPGLEGFPGIKGDRGPAGPPGIAGISGKPGAPGPPGVPGEPGDRGPVGDIGFPGP 915

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGN 249
            G  G+ G                  I GKDGLPG  GI   PG  G  GE+G  G  G+
Sbjct: 916 EGPSGKPG------------------INGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGD 957

Query: 250 RGKSGINGVPGTPAI 264
           RG  G  G PG P +
Sbjct: 958 RGPQGEQGKPGLPGM 972



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 89/200 (44%), Gaps = 30/200 (15%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---PGPQGIPGDEGKR 181
           G KG+ G  GE G  GAPG+ G  G QG  G +G+ G KG+ G    PGP GI G  G +
Sbjct: 304 GQKGDKGEPGENGLHGAPGLPGQKGEQGFEGSKGEIGEKGEQGEKGDPGPAGINGQNGLK 363

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK------------- 228
           G  G  G PG  G  G  G PG P L G  G  G  G PGK+G  G+             
Sbjct: 364 GDLGPHGPPGPKGEKGDTGPPGPPALTGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPP 423

Query: 229 --------DGIPGT-----NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
                    G+  T      G  GE G  GP+G +G++G  G PG+      K ES   L
Sbjct: 424 GPPGPPGIQGVQQTLGYYNKGNLGEYGAHGPKGEKGETGQPGFPGSIGPKGQKGESGESL 483

Query: 276 PNSETSQLLIPPTIVGSEHI 295
              E       P ++GS+ I
Sbjct: 484 SKGEKGDRGE-PGLIGSQGI 502



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 51/119 (42%), Positives = 58/119 (48%), Gaps = 24/119 (20%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--VVGPPGPQGIPGDEGKRGPKGDMGYP 169
                              G+ G +GE G PG  + G PG  G PG  G RGPKG+ G P
Sbjct: 567 ------------------PGLPGPKGEAGPPGKSLPGEPGLDGNPGTPGPRGPKGERGLP 608

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
           G  G PGD   RGP G +G PGR G  G  G PG  G  G+PG  G  G PG DG PG+
Sbjct: 609 GVHGSPGD---RGPPG-VGVPGRTGSQGPAGEPGIQGPRGLPGLPGTPGTPGNDGAPGR 663


>gi|119626643|gb|EAX06238.1| collagen, type XXV, alpha 1, isoform CRA_a [Homo sapiens]
          Length = 445

 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 95/184 (51%), Gaps = 21/184 (11%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GP GQKG IGA G  G+ G++GE G PG VG    PGP+G PG++G+   KGD G  GP+
Sbjct: 240 GPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGE---KGDAGENGPK 296

Query: 173 GIPGDEGKRG--PKGDMGYPGRIGLDGRDG------------LPGEPGLDGIPGRNGMDG 218
           G  G++G  G    G  G PG  G  G+ G            + GEPG  G  G  G+ G
Sbjct: 297 GDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPG 356

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
           +PG  G  G+ G PG  G  GE G  GP+G +G+SG  G  G+      K +S +  P  
Sbjct: 357 LPGTKGERGEAGPPG-RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRG 415

Query: 279 ETSQ 282
              Q
Sbjct: 416 PPGQ 419



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 86/164 (52%), Gaps = 17/164 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---GPPGPQGIPGDEGKRGPKGDMGY 168
           PG+ G  G+ GE G  G +G  G++G  GAPG+    G  G  G+PG  G+ G  G  G 
Sbjct: 221 PGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGE 280

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG------------M 216
           PG QG  GD G+ GPKGD G  G  G     G+ GEPG  G PG+ G            +
Sbjct: 281 PGEQGEKGDAGENGPKGDTGEKGDPGSS-AAGIKGEPGESGRPGQKGEPGLPGLPGLPGI 339

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G PG  G  G+ G+PG  GT GE+G  GP G RG+ G  G PG
Sbjct: 340 KGEPGFIGPQGEPGLPGLPGTKGERGEAGPPG-RGERGEPGAPG 382



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 66/159 (41%), Gaps = 38/159 (23%)

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           D GK GP+G  G PG  G PG++G  GP G  G  G IG  G  G+ G+ G  G+PG  G
Sbjct: 211 DTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVG 270

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS---------------------- 253
            +GIPG  G PG+ G  G  G NG KG TG +G+ G S                      
Sbjct: 271 QNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGL 330

Query: 254 ----------------GINGVPGTPAICAYKRESCSLLP 276
                           G  G PG P +   K E     P
Sbjct: 331 PGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGP 369



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 46/88 (52%), Gaps = 10/88 (11%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     E   PGL G  G++GE G  G       RGE+G PG    PGP+G  G+ G R
Sbjct: 344 GFIGPQGEPGLPGLPGTKGERGEAGPPG-------RGERGEPGA---PGPKGKQGESGTR 393

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMG 188
           GPKG  G  G +G  G +G RGP G  G
Sbjct: 394 GPKGSKGDRGEKGDSGAQGPRGPPGQKG 421



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 79/173 (45%), Gaps = 39/173 (22%)

Query: 112 PGLQGPIGQKGEIGAKGE-----------MGVKGERGEKGAPGVVG------PPGPQGIP 154
           PG QG  G  GE G KG+            G+KGE GE G PG  G       PG  GI 
Sbjct: 281 PGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIK 340

Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
           G+ G  GP+G+ G P   G+PG +G+R   G+ G PGR    G  G PG PG        
Sbjct: 341 GEPGFIGPQGEPGLP---GLPGTKGER---GEAGPPGR----GERGEPGAPGPK------ 384

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
                 GK G  G  G  G+ G  GEKG +G +G RG  G  G  G   I  Y
Sbjct: 385 ------GKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDY 431


>gi|426352699|ref|XP_004043847.1| PREDICTED: collagen alpha-2(XI) chain isoform 2 [Gorilla gorilla
           gorilla]
          Length = 1650

 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 93/188 (49%), Gaps = 42/188 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE G +G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 574 PGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 633

Query: 172 QGIPGDEGKRGPKG------------------------DMGYPGRIGLDG------RDGL 201
           +G+ G +G RG KG                        D+G PG  G DG      R GL
Sbjct: 634 RGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGDVGVPGSRGEDGPEGPKGRTGL 693

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGM------TGPRGN 249
            G+PG  G+ G  G  G+PG  G PG+       G PG  G +GEKG       +GPRG 
Sbjct: 694 TGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGE 753

Query: 250 RGKSGING 257
           RG +G  G
Sbjct: 754 RGPTGPRG 761



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 79/150 (52%), Gaps = 12/150 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +G  G +G +G  GE+G +G PG+ G PG  G PG  GK GP G           G++
Sbjct: 569 GTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTK---------GNQ 619

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G  GP+G +GYPG  G+ G DG+    GL G  G  G DG PG  G  G  G  G  G  
Sbjct: 620 GPSGPQGPLGYPGPRGVKGVDGI---RGLKGHKGEKGEDGFPGFKGDIGVKGDRGDVGVP 676

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G +G  GP G +G++G+ G PG P +   K
Sbjct: 677 GSRGEDGPEGPKGRTGLTGDPGPPGLMGEK 706



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 79/149 (53%), Gaps = 18/149 (12%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG++GVKG+RG+ G PG  G  GP      EG +G  G  G P
Sbjct: 644 GLKGHKGEKGEDGFPGFKGDIGVKGDRGDVGVPGSRGEDGP------EGPKGRTGLTGDP 697

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G+ G++GK G  G  GYPGR G  G  G PG PG  G  G  G+          GK 
Sbjct: 698 GPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLS---------GKS 748

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G  G  G +G  GPRG  GKSG  G 
Sbjct: 749 GPRGERGPTGPRGQRGPRGATGKSGAKGT 777



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 95/204 (46%), Gaps = 54/204 (26%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRG 161
           PPG  G  G+ G  GA+G   E GVKG+RG  G PG+ G  G       QG+PG  G+ G
Sbjct: 444 PPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG 503

Query: 162 PKGDMGYPGPQGIPGDEGKRG------------------------PKGDM---------- 187
            +GD G  GP+G+PG+ G RG                        PKG +          
Sbjct: 504 ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPG 563

Query: 188 --------GYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   G PG    IG  G  G  G+PGL G+PG +G  G PGK+G PG  G  G +G
Sbjct: 564 QQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 623

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GPRG +G  GI G+ G
Sbjct: 624 PQGPLGYPGPRGVKGVDGIRGLKG 647



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 78/161 (48%), Gaps = 24/161 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G +GE G  G+ G  G  GE G PG +G  GP G PG EG++G KG  G PG  G PG  
Sbjct: 1205 GDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGPEGRQGGKGAKGDPGAIGAPGKT 1264

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM------------------DGIP 220
            G  GP G  G P   G DG  GLPG  G  G PG  G                    G  
Sbjct: 1265 GPVGPAGPAGKP---GPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAK 1321

Query: 221  GKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G+ G PG  G+   PG  G  G++G+ GP+G+ G+ G  G+
Sbjct: 1322 GEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGI 1362



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 87/193 (45%), Gaps = 45/193 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+GQ G  G KGE G  G +G +G  G+ GPPG             +G+PG+ G  
Sbjct: 410 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGV- 468

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI- 219
             KGD G+ G  G+PG++G RG  G  G PG  G DG  G  GE G  G+PG +G  G+ 
Sbjct: 469 --KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLL 526

Query: 220 --------------PGKDGLPGKDG---------------IPGTNGTNGEKGMTGPRGNR 250
                          G DG  G  G                PGT G  G +G  GP G +
Sbjct: 527 GPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEK 586

Query: 251 GKSGINGVPGTPA 263
           G  G  G+PG P 
Sbjct: 587 GPQGKPGLPGMPG 599



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 74/140 (52%), Gaps = 21/140 (15%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G MG  G  G  G PG    PG +G  GD G +GP+G  G  GP   PG  G+R   
Sbjct: 401 GPPGPMGYTGRPGPLGQPGS---PGLKGESGDLGPQGPRGPQGLTGP---PGKAGRR--- 451

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEK 241
                 GR G DG  G+PGEPG+ G  G +G+ G+PG+ G     G  G+PG  G +GE+
Sbjct: 452 ------GRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGER 505

Query: 242 ---GMTGPRGNRGKSGINGV 258
              G  GPRG  G+SG  G+
Sbjct: 506 GDDGEIGPRGLPGESGPRGL 525



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 96/230 (41%), Gaps = 57/230 (24%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G         P G QG  G  G+ G +G  G  G RG  G PGV G  G  G+PG  
Sbjct: 422 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLP 481

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIG-------------------- 194
           G++G +GD G  G  G PG++G+RG  G++   G PG  G                    
Sbjct: 482 GEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVR 541

Query: 195 -LDGRDGLPGE---------------PGLDGIP---------------GRNGMDGIPGKD 223
            +DG  G  G                PG  G+P               G+ G+ G+PG D
Sbjct: 542 GMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSD 601

Query: 224 GL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G    PGK+G PGT G  G  G  GP G  G  G+ GV G   +  +K E
Sbjct: 602 GPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 651



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 58/118 (49%), Gaps = 24/118 (20%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KG+RGE G PG  G PGP G      + GP G +G  GP G PG EG++G KG  G P
Sbjct: 1202 GAKGDRGEDGEPGQPGSPGPTG------ENGPPGPLGKRGPAGSPGPEGRQGGKGAKGDP 1255

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTG 245
            G I               G PG+ G  G  G  G PG D   G+PG+ G  G  G TG
Sbjct: 1256 GAI---------------GAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATG 1298



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 71/149 (47%), Gaps = 27/149 (18%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
            G    T E  PPG   P+G++G  G+ G  G +G +G KG PG +G PG   P G  G  
Sbjct: 1217 GSPGPTGENGPPG---PLGKRGPAGSPGPEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPA 1273

Query: 158  GKRGPKGDMGYPGP---QGIPGDEGKR------------------GPKGDMGYPGRIGLD 196
            GK GP G  G PG    QG PG  G+                   G KG+ G+PG IGL 
Sbjct: 1274 GKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLI 1333

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1334 GPPGEQGEKGDRGLPGPQGSPGQKGEMGI 1362



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 56/144 (38%), Gaps = 49/144 (34%)

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG----------------------- 206
           GP GI G+ G  G  G+ G PGR GL G DG PG PG                       
Sbjct: 325 GPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQ 384

Query: 207 --------------LDGIP------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                         L G P      GR G  G PG  GL G+ G  G  G  G +G+TGP
Sbjct: 385 EAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP 444

Query: 247 ------RGNRGKSGINGVPGTPAI 264
                 RG  G  G  G+PG P +
Sbjct: 445 PGKAGRRGRAGADGARGMPGEPGV 468


>gi|317419610|emb|CBN81647.1| Collagen type I alpha 3 chain [Dicentrarchus labrax]
          Length = 1450

 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 89/183 (48%), Gaps = 36/183 (19%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMG 167
           P G  GP G+KGE G  G  G +G  G +GA G  G PG QG PG+    G  GP+GD G
Sbjct: 607 PSGPAGPAGEKGEQGPAGPPGFQGLPGPQGATGETGKPGEQGAPGEAGPSGPSGPRGDRG 666

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR------------------DGLPGEPGLDG 209
           +PG +G PG  G  GP+   G PG  G DG                    G+PGE G  G
Sbjct: 667 FPGERGSPGVGGPTGPR---GAPGPAGNDGAKGEPGAAGAPGGQGAPGMQGMPGERGAAG 723

Query: 210 IP---------GRNGMDGIPGKD---GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           +P         G  G +G PGKD   G+ G  G+PG +G  GEKG  G  G  G SG  G
Sbjct: 724 LPGVKGERGDAGSKGGEGAPGKDGVRGITGSIGVPGPHGAQGEKGEAGAVGTSGPSGPRG 783

Query: 258 VPG 260
            PG
Sbjct: 784 APG 786



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 83/181 (45%), Gaps = 39/181 (21%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD----------- 165
           E GA G MG +G  GE G+ G  G PG +G+      PG +GK GP G            
Sbjct: 496 ERGAPGAMGAQGATGESGSSGAPGAPGSKGVTGSPGSPGPDGKAGPSGAQGQDGRPGPPG 555

Query: 166 ----------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN- 214
                     MG+PGP+G  G+ GK G +G  G PG +G  G+DG  G PG  G  G   
Sbjct: 556 PAGSRGQPGVMGFPGPKGASGESGKPGERGPGGAPGSVGAPGKDGDIGAPGPSGPAGPAG 615

Query: 215 -----------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                      G  G+PG  G  G+ G PG  G  GE G +GP G RG  G  G  G+P 
Sbjct: 616 EKGEQGPAGPPGFQGLPGPQGATGETGKPGEQGAPGEAGPSGPSGPRGDRGFPGERGSPG 675

Query: 264 I 264
           +
Sbjct: 676 V 676



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 86/182 (47%), Gaps = 36/182 (19%)

Query: 106 TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG- 164
           T    P G  GP G  G+ GAKGE G  G +G+ GAPG  GP G  G  G+ G  GPKG 
Sbjct: 791 TGPAGPAGFAGPPGADGQPGAKGESGDTGPKGDAGAPGPAGPVGAAGPQGNAGPPGPKGA 850

Query: 165 --------DMGYPGPQG------------------IPGDEGKRGPKGDMGYPGRIGLDGR 198
                     G+PGP G                    G +G RG +G+ G  GR      
Sbjct: 851 RGGAGTPGATGFPGPAGRVGPPGPSGAGGPPGPAGPVGKDGARGGRGETGPAGR------ 904

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
              PGE G  G PG +G  G PG DG PG  GIPG +G  G++G  G  G RG+ G  G+
Sbjct: 905 ---PGEAGASGPPGLSGEKGSPGSDGAPGPAGIPGPSGIAGQRGNVGLPGQRGERGFPGL 961

Query: 259 PG 260
           PG
Sbjct: 962 PG 963



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/134 (44%), Positives = 67/134 (50%), Gaps = 6/134 (4%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
           +G  G  GA GE G  GERG  GAPG VG       PG +G  G  G  G  GP G  G+
Sbjct: 566 MGFPGPKGASGESGKPGERGPGGAPGSVG------APGKDGDIGAPGPSGPAGPAGEKGE 619

Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
           +G  GP G  G PG  G  G  G PGE G  G  G +G  G  G  G PG+ G PG  G 
Sbjct: 620 QGPAGPPGFQGLPGPQGATGETGKPGEQGAPGEAGPSGPSGPRGDRGFPGERGSPGVGGP 679

Query: 238 NGEKGMTGPRGNRG 251
            G +G  GP GN G
Sbjct: 680 TGPRGAPGPAGNDG 693



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 93/201 (46%), Gaps = 18/201 (8%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
              + G   +T E   PG QG  G+ G  G  G  G +G  GE+G+PGV GP GP+G PG
Sbjct: 628 FQGLPGPQGATGETGKPGEQGAPGEAGPSGPSGPRGDRGFPGERGSPGVGGPTGPRGAPG 687

Query: 156 DEGKRGPKGD---------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
             G  G KG+                G PG +G  G  G +G +GD G  G  G  G+DG
Sbjct: 688 PAGNDGAKGEPGAAGAPGGQGAPGMQGMPGERGAAGLPGVKGERGDAGSKGGEGAPGKDG 747

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + G  G  G+PG +G  G  G+ G  G  G  G  G  GE+G TGP G  G +G  G  G
Sbjct: 748 VRGITGSIGVPGPHGAQGEKGEAGAVGTSGPSGPRGAPGERGETGPAGPAGFAGPPGADG 807

Query: 261 TPAICAYKRESCSLLPNSETS 281
            P     K ES    P  +  
Sbjct: 808 QPGA---KGESGDTGPKGDAG 825



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 71/138 (51%), Gaps = 18/138 (13%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G +G RGE G  G  G  G  G PG  G++G  G  G PGP GIPG  G  G +G++G P
Sbjct: 891  GARGGRGETGPAGRPGEAGASGPPGLSGEKGSPGSDGAPGPAGIPGPSGIAGQRGNVGLP 950

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDG---------------IPGKDGLPGKDGIPGTN 235
            G+    G  G PG PG  G PG+ G  G               + G  G  G++G PG +
Sbjct: 951  GQR---GERGFPGLPGQSGEPGKQGPSGMVGERGPPGPAGPPGLSGATGEAGREGSPGHD 1007

Query: 236  GTNGEKGMTGPRGNRGKS 253
            G +G  G  GP+G+RG+S
Sbjct: 1008 GVSGRDGSPGPKGDRGES 1025



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 72/138 (52%), Gaps = 9/138 (6%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  G++G+ G+KG  G  G+ G +G  G +G PGP G  G++G+ G  G  G  GP+
Sbjct: 723 GLPGVKGERGDAGSKGGEGAPGKDGVRGITGSIGVPGPHGAQGEKGEAGAVGTSGPSGPR 782

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG+ G+ GP G  G+ G  G DG+ G  GE         +G  G  G  G PG  G  
Sbjct: 783 GAPGERGETGPAGPAGFAGPPGADGQPGAKGE---------SGDTGPKGDAGAPGPAGPV 833

Query: 233 GTNGTNGEKGMTGPRGNR 250
           G  G  G  G  GP+G R
Sbjct: 834 GAAGPQGNAGPPGPKGAR 851



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 72/140 (51%), Gaps = 24/140 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G  GP G+ GE GA G  G+ GE   KG+PG  G PGP GIPG  G  G +G++G PG  
Sbjct: 897  GETGPAGRPGEAGASGPPGLSGE---KGSPGSDGAPGPAGIPGPSGIAGQRGNVGLPG-- 951

Query: 173  GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------EPGLDGIPGRNGMDGIP 220
                   +RG +G  G PG+ G  G+ G  G             PGL G  G  G +G P
Sbjct: 952  -------QRGERGFPGLPGQSGEPGKQGPSGMVGERGPPGPAGPPGLSGATGEAGREGSP 1004

Query: 221  GKDGLPGKDGIPGTNGTNGE 240
            G DG+ G+DG PG  G  GE
Sbjct: 1005 GHDGVSGRDGSPGPKGDRGE 1024



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 90/208 (43%), Gaps = 46/208 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G  G  G IG  G  G +GE+GE GA G  GP GP+G PG+ G+ GP G  G+ GP
Sbjct: 743 PGKDGVRGITGSIGVPGPHGAQGEKGEAGAVGTSGPSGPRGAPGERGETGPAGPAGFAGP 802

Query: 172 QGIPGDEGKR------GPKGDMGYP---GRIGLDGRDGLPGEPGLDG------------I 210
            G  G  G +      GPKGD G P   G +G  G  G  G PG  G             
Sbjct: 803 PGADGQPGAKGESGDTGPKGDAGAPGPAGPVGAAGPQGNAGPPGPKGARGGAGTPGATGF 862

Query: 211 PGRNGM---------------------DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG  G                      DG  G  G  G  G PG  G +G  G++G +G+
Sbjct: 863 PGPAGRVGPPGPSGAGGPPGPAGPVGKDGARGGRGETGPAGRPGEAGASGPPGLSGEKGS 922

Query: 250 RGKSGI---NGVPGTPAICAYKRESCSL 274
            G  G     G+PG P+  A +R +  L
Sbjct: 923 PGSDGAPGPAGIPG-PSGIAGQRGNVGL 949



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 81/209 (38%), Gaps = 69/209 (33%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G +G +GA G    KG  G+ GAPG      P+G PG +G+ GP G  G  GP
Sbjct: 398 PGSRGPAGAQGAVGAPG---PKGNNGDHGAPG------PKGEPGSKGEPGPAGVQGLAGP 448

Query: 172 ------------------------QGIPG---------------DEGKRGPKGDMGYPGR 192
                                   +G PG                 G+RG  G MG  G 
Sbjct: 449 AGEEGKRGGRGEPGGAGPRGPPGERGAPGARGFPGADGAAGGKGAPGERGAPGAMGAQGA 508

Query: 193 IGLDGRDGLPGEPG---LDGIPGRNGMDGIPGKDGLPGKD------------------GI 231
            G  G  G PG PG   + G PG  G DG  G  G  G+D                  G 
Sbjct: 509 TGESGSSGAPGAPGSKGVTGSPGSPGPDGKAGPSGAQGQDGRPGPPGPAGSRGQPGVMGF 568

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           PG  G +GE G  G RG  G  G  G PG
Sbjct: 569 PGPKGASGESGKPGERGPGGAPGSVGAPG 597


>gi|16197600|gb|AAL13166.1| type V preprocollagen alpha 2 chain [Homo sapiens]
          Length = 1347

 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +   +G      E  P G+QGPIG  GE         +G+RG +G PG VGPPGP G  G
Sbjct: 320 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 370

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
             G RG  G  G PGP+G  G+       G +G +GD G PG  GL G  GL G PG+ G
Sbjct: 371 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 430

Query: 210 IPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G+ G  G PG+DG PG  G       PG+ G  G KG +G  G  G++G  GVPG
Sbjct: 431 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 487



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP G +G+ G  G  G KGE G KG PG  G  GP G PG+EGKRGP+GD G  GP   P
Sbjct: 307 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 363

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
           G  G+RG  G+ G+PG  GL G  G  GE G  G  G  G  G PG+   PG+ G+PG  
Sbjct: 364 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 420

Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
           G  G  G+ GP G     G  G +G PG P     + +  S+ LP  + S
Sbjct: 421 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 470



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
           G   +  +  PPGLQG  G++G  G  G  G +G  GEKGA G  G  G +         
Sbjct: 595 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 654

Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
              G  G++G+ GP+G +G PG +G PG  G+ GP G +G+ G  G DG+ G+ GEPG  
Sbjct: 655 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 713

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             PG+ G  G PG  GL    G PG +G NG  G+ G RG +G  G  G PG+
Sbjct: 714 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 761



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
           PG+QGP G+ G +GA GE G  G  G    +G PG +G PGP+G  GD GK         
Sbjct: 426 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 485

Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
                                    G +G+ G PGP                     QG+
Sbjct: 486 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 545

Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           PGD G     GP+G+ G PG  G  G  GLPGE G+ G  G +G  G PG  G PG  G 
Sbjct: 546 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 605

Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
           PG  G  GE+G+    GP+G+RG  G  G  GT
Sbjct: 606 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 638



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)

Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
            G +G +G+ G+RGE+G PG+   PGP G P   GK GP G                   
Sbjct: 837 TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 890

Query: 166 MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           +G PGP+      G PG +G  G +GD G PG  GL G  G PG PG  G PG  G  G 
Sbjct: 891 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 950

Query: 220 PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           PG        G  GK G+PG  G  G+KG  G RG+RG+ G  G
Sbjct: 951 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 994



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G+ G  G  GE+G  G  G +G PG  G PG +G  G +G  GPKG++G PG +G  G  
Sbjct: 115 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 174

Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
              G  GP G  G PG  G  G  G PG+ G  G+PG+ G M   GIPG  G PG  G+ 
Sbjct: 175 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGLPGKPGPMGPLGIPGSSGFPGNPGMK 234

Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
           G  G  G +G  GP+G RG++
Sbjct: 235 GEAGPTGARGPEGPQGQRGET 255



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            + G   +  E  P G  GP G +G+ G  GE G+ G RG  G PGV GP         E
Sbjct: 382 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGP---------E 432

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
           GK GP G  G  G  G PG  G RG  G MG PG  G  G  G PGE G  G+PG+    
Sbjct: 433 GKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR--- 489

Query: 218 GIPGKDG 224
           G PGKDG
Sbjct: 490 GAPGKDG 496



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 88/219 (40%), Gaps = 72/219 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PGL+G  G KG  G KGE+G  G +GE G   P G +GP GP+G+PG+ G+ GP+G  G 
Sbjct: 144 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 203

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
            G  G+PG   K GP G +G PG  G  G  G+ GE G                      
Sbjct: 204 RGAHGLPG---KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 260

Query: 207 -----------LDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
                       DG PG  G  G PG                          G PG  G+
Sbjct: 261 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 320

Query: 232 PGTNGTNGEKGMTGPR---------GNRGKSGINGVPGT 261
           PG  G  G KG  GP          G  GK G  G PGT
Sbjct: 321 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT 359



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
           PG  GP+G +GE    G +GE G+ G  GEKG  G  GP GP+G PG  G     GP G 
Sbjct: 549 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 608

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
            G PG +GI G  G +G +G +G  G  G  G DG              G  G  G PG 
Sbjct: 609 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 668

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G+ G PG  G PG     G NG  G  G  GP+G  G+ G+ G PG P 
Sbjct: 669 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 715



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
           G  GP G  G  G++G  G +GE G  GA G  GP GP G PG   + G+ G KGD G P
Sbjct: 664 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 723

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
           GPQG+ G  G  GP       G  GL G  G  G PG  G PG  G              
Sbjct: 724 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 777

Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
              G PGK+G PG  G PG++G
Sbjct: 778 GPLGEPGKEGPPGLRGDPGSHG 799



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 46/77 (59%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG  G +G++G+ G  G  G+ G +G  G PG VG PG  G  GD G RGP G  G  G 
Sbjct: 906 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 965

Query: 172 QGIPGDEGKRGPKGDMG 188
           +G+PG +G RG KGD G
Sbjct: 966 RGLPGPQGPRGDKGDHG 982



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)

Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
           PG  GP+G +G                                            G  G 
Sbjct: 60  PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGR 119

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
            G  GE G  G+PG  G PG  G+PG +G RG KG  G  G  G PG +G+ GP G MG 
Sbjct: 120 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGA 179

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
            G +G  G  G  G  G  G PG+ G  G+PGK       G+PG  G PG  G  GE G 
Sbjct: 180 MGPLGPRGMPGERGRLGPQGAPGQRGAHGLPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 239

Query: 244 TGPRGNRGKSGING 257
           TG RG  G  G  G
Sbjct: 240 TGARGPEGPQGQRG 253



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G +GE G  G +G  G +G  G PGV G PG  G  GD G  GP+G  G PG
Sbjct: 674 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 733

Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
           P G   +PG +G RG   P G  G+PG  G                 G  G  G PGL G
Sbjct: 734 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 793

Query: 210 IPGRNG 215
            PG +G
Sbjct: 794 DPGSHG 799


>gi|29516|emb|CAA34488.1| unnamed protein product [Homo sapiens]
          Length = 1418

 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 91/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG   + GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 746 AGARGAPGERGETGPPGTSGIAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 805

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 806 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 865

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 866 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 916

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 917 PGQRGERGFPGLPG 930



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 378 GPLGPKGQTGKPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 437

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 438 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 497

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 498 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 557

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 558 GLRGLPG 564



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 87/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 619 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 678

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 738

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G+   PG DG PG  G  GE G  G
Sbjct: 739 PPGPAGSAGARGAPGE---------RGETGPPGTSGIAGPPGADGQPGAKGEQGEAGQKG 789

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 790 DAGAPGPQGPSGAPG 804



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 306 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 365

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 366 GPRGPPDPQGATGPLGPKGQTGKPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 425

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 426 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 482

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 483 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 511



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 79/175 (45%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 645 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 694

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 695 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 752

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG +G+ G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 753 GERGETGPPGTSGIAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 807



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 86/190 (45%), Gaps = 51/190 (26%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVV------------GPPGPQGIP---GDEGKRGPK 163
           G+KGE+G  G  G  G RG   APG              GPPG  G P   G++G+ G K
Sbjct: 732 GEKGEVGPPGPAGSAGARG---APGERGETGPPGTSGIAGPPGADGQPGAKGEQGEAGQK 788

Query: 164 GDMGYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG----------------- 197
           GD G PGPQG  G  G +GP         +G  G PG  G  G                 
Sbjct: 789 GDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPP 848

Query: 198 -------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
                  +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  
Sbjct: 849 GPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLA 908

Query: 251 GKSGINGVPG 260
           G+ GI G+PG
Sbjct: 909 GQRGIVGLPG 918



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 75/163 (46%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 681 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 734

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G+ G  G  G+PG  G  G  G     G  
Sbjct: 735 GEVGPPGPAGSAGARGAPGERGETGPPGTSGIAGPPGADGQPGAKGEQGEAGQK---GDA 791

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 834



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 453 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 512

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 513 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 569

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 570 GAEGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 629

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 630 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 665



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 83/211 (39%), Gaps = 57/211 (27%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------- 146
           QG      +   PG QGP G  G  G  G  G KG RG +G PG  G             
Sbjct: 782 QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 841

Query: 147 --------------------------PPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
                                     PPG  G PG +G  GP G+ G PG  G  G EG 
Sbjct: 842 NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 901

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD----------------- 223
            GP+G  G  G +GL G+ G  G PGL G  G  G  G PG                   
Sbjct: 902 PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGQQGAPGASGDRGPPGPVGPPGLTGP 961

Query: 224 -GLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G PG++G PG +G  G  G  G +G+RG++
Sbjct: 962 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 992



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 305 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 358

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 359 AGAPGFPGPRGPPDPQGATGPLGPKGQTGKPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 418

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 419 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 478

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 479 PGRPGEPGLPGAR 491



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 88/207 (42%), Gaps = 39/207 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 738

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGRIG 194
            PG  G  G +G PG+ G+ GP G  G  GP G        G++G+ G KGD G PG  G
Sbjct: 739 PPGPAGSAGARGAPGERGETGPPGTSGIAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 798

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------------------IPGTNG 236
             G  G  G  G+ G  G  G  G PG  G PG  G                    G +G
Sbjct: 799 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDG 858

Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
             G +G +GP G  G+ G+ G  G P 
Sbjct: 859 PKGARGDSGPPGRAGEPGLQGPAGPPG 885



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 618 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 677

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 678 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 737

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 738 GPPGPAGSAGARGAPGERGETGPPGTSGIAGPPGADGQPGAKGEQGEA 785



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 83/210 (39%), Gaps = 66/210 (31%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-- 179
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G  G  
Sbjct: 858  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQRGIV 914

Query: 180  ----KRGPKGDMGYPGRIGLDGRDGLPG---------------------------EPGLD 208
                +RG +G  G PG  G  G+ G PG                            PG D
Sbjct: 915  GLPGQRGERGFPGLPGPSGEPGQQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGAD 974

Query: 209  GIPGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTN 238
            G PGR+G  G+                               G  G  G  G  G +G  
Sbjct: 975  GPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPA 1034

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1035 GARGIQGPQGPRGDKGEAGEPGERGLKGHR 1064



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 90/226 (39%), Gaps = 84/226 (37%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+             G +G+ 
Sbjct: 528 GQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAEGPPGPAGPAGERGEQ 587

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QG+PG+ G  G   P+G+ G+PG        GL 
Sbjct: 588 GAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 647

Query: 197 GRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GKD 223
           G  GLPG PG D                     G+PG  G  GI             G +
Sbjct: 648 GPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 707

Query: 224 GLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 708 GAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 753



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 215 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 274

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 275 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 334

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 335 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPDPQGATGPLGPKGQTGKPGI 391

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 392 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 422



 Score = 43.1 bits (100), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 173 GIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG  G+RGP   +G  G+PG  GL G  G  G PGLDG  G  G  G+ G+ G PG++
Sbjct: 189 GKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN 248

Query: 230 GIPGTNGTNG 239
           G PG  G  G
Sbjct: 249 GSPGPMGPRG 258


>gi|363737130|ref|XP_001234730.2| PREDICTED: collagen alpha-3(IV) chain [Gallus gallus]
          Length = 1890

 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 89/168 (52%), Gaps = 15/168 (8%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMGYP 169
            PG +G  G +G++G  G  G  G+ GEKG PG++  G PG  G PG  G  GPKGD G+P
Sbjct: 931  PGGRGAPGCEGKMGEPGRAGNLGQPGEKGDPGIIIPGEPGKLGSPGGRGIPGPKGDTGFP 990

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP-----GLDGIPGRNGMDGIPGKDG 224
            G  G+PG  G+ G  G  G PG  G+ G  G PG+P     GL G+PG  G  G PG+ G
Sbjct: 991  GLPGLPGHAGRDGNSGLRGDPGSSGVPGDPGFPGKPAECLTGLPGLPGVQGATGPPGRRG 1050

Query: 225  LPGKD--------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G          GIPG  G  GE G+ G  GN G  G+ G  G P +
Sbjct: 1051 SLGSKGKLGPPGLGIPGIYGKPGEPGLIGLLGNTGLPGLKGQSGRPGV 1098



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/182 (42%), Positives = 90/182 (49%), Gaps = 29/182 (15%)

Query: 113  GLQGPIGQKGEIGAKGEM----------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
            GL GP G  GE G KGE           G +G  G  G+PGV G  G  G PGD G  GP
Sbjct: 848  GLPGPHGLPGEAGLKGETIRIAPLPALPGPQGPDGLPGSPGVPGRVGTSGQPGDVGHPGP 907

Query: 163  KGDMGYPG--------PQG---IPGDEGKRGPKGDMGYPGRIGLDGRDG--------LPG 203
             GD G+PG        P+G   +PG  G  G +G MG PGR G  G+ G        +PG
Sbjct: 908  TGDTGFPGLGFPGNPGPKGNKGLPGGRGAPGCEGKMGEPGRAGNLGQPGEKGDPGIIIPG 967

Query: 204  EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            EPG  G PG  G+ G  G  G PG  G+PG  G +G  G+ G  G+ G  G  G PG PA
Sbjct: 968  EPGKLGSPGGRGIPGPKGDTGFPGLPGLPGHAGRDGNSGLRGDPGSSGVPGDPGFPGKPA 1027

Query: 264  IC 265
             C
Sbjct: 1028 EC 1029



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 90/182 (49%), Gaps = 37/182 (20%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG+ G  G  G  G KG MG+ G++G+KG+PG     G PGP G  G  G+   KGD GY
Sbjct: 1219 PGIPGGQGFPGAPGNKGNMGIPGQKGQKGSPGFPGTSGDPGPTGYGGFPGE---KGDPGY 1275

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------RNGMDGIPGK 222
            P P G+PG+ G   PKGD G PG +G  G  G  G+PG +G PG        G+ G PGK
Sbjct: 1276 PSP-GLPGEPG---PKGDPGAPGVLGRKGEKGSQGQPGHNGAPGLHGPRGETGVAGNPGK 1331

Query: 223  DGLPGKDGI---------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             GLPG  G+                     PG NG  GE+G  G  G  G  G  G PG 
Sbjct: 1332 LGLPGYVGVKGQQGHPGQQGVIGPPGAAGYPGENGLAGERGNQGQDGMPGPPGAKGEPGA 1391

Query: 262  PA 263
            P 
Sbjct: 1392 PG 1393



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 94/206 (45%), Gaps = 57/206 (27%)

Query: 109  YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            Y  PGL G  G KG+ GA G +G KGE+G +G PG        G PG  G RG  G  G 
Sbjct: 1275 YPSPGLPGEPGPKGDPGAPGVLGRKGEKGSQGQPGH------NGAPGLHGPRGETGVAGN 1328

Query: 169  PGPQGIPGDEGKR------------GPKGDMGYPGRIGL------DGRDGLPGEPGLDGI 210
            PG  G+PG  G +            GP G  GYPG  GL       G+DG+PG PG  G 
Sbjct: 1329 PGKLGLPGYVGVKGQQGHPGQQGVIGPPGAAGYPGENGLAGERGNQGQDGMPGPPGAKGE 1388

Query: 211  PGRNGMDGIPGKDGLPGKDGI---------------------------PGTNGTNGEKG- 242
            PG  G  GIPG  G+PG+ G+                           PG  G  G +G 
Sbjct: 1389 PGAPGR-GIPGLQGVPGRRGVKGDMGLPGFPGPPGMKGLQGDQGPLGPPGLMGLPGFQGA 1447

Query: 243  ----MTGPRGNRGKSGINGVPGTPAI 264
                +TGP+GNRG +G +G PG P  
Sbjct: 1448 TGMAITGPKGNRGIAGADGRPGIPGF 1473



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 85/151 (56%), Gaps = 17/151 (11%)

Query: 118  IGQKGEIGAKG---EMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            IG KGE G+KG    MG+KGE+G+   +G PG++   G +G+PG  G +G  G  G PG 
Sbjct: 1168 IGNKGEQGSKGVQGRMGLKGEKGDAGVQGPPGLI---GSEGVPGVPGVKGFMGLPGIPGG 1224

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG--KD 229
            QG PG  G    KG+MG PG+    G+ G PG PG  G PG  G  G PG+ G PG    
Sbjct: 1225 QGFPGAPGN---KGNMGIPGQ---KGQKGSPGFPGTSGDPGPTGYGGFPGEKGDPGYPSP 1278

Query: 230  GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G+PG  G  G+ G  G  G +G+ G  G PG
Sbjct: 1279 GLPGEPGPKGDPGAPGVLGRKGEKGSQGQPG 1309



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 89/198 (44%), Gaps = 42/198 (21%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------------- 152
            PG+ G  G+ G IG  G  G+ G +G+ G PGV G PGP+G                   
Sbjct: 1066 PGIYGKPGEPGLIGLLGNTGLPGLKGQSGRPGVSGVPGPRGEPGIMGPLGIPGPPGRIGS 1125

Query: 153  -----------IPGDEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGL 195
                        PG +G++G  G  G PG +G PG        G +G +G  G  GR+GL
Sbjct: 1126 PGNPGIRGSFGFPGLKGRKGLLGAQGEPGDKGFPGPSETLVVIGNKGEQGSKGVQGRMGL 1185

Query: 196  DGRD---GLPGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
             G     G+ G PGL   +G+PG  G+ G  G  G+PG  G PG  G  G  G+ G +G 
Sbjct: 1186 KGEKGDAGVQGPPGLIGSEGVPGVPGVKGFMGLPGIPGGQGFPGAPGNKGNMGIPGQKGQ 1245

Query: 250  RGKSGINGVPGTPAICAY 267
            +G  G  G  G P    Y
Sbjct: 1246 KGSPGFPGTSGDPGPTGY 1263



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 87/182 (47%), Gaps = 26/182 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGIPGDEGK---RGP 162
            PG++G  G  G  G KG +G +GE G+KG PG      V+G  G QG  G +G+   +G 
Sbjct: 1129 PGIRGSFGFPGLKGRKGLLGAQGEPGDKGFPGPSETLVVIGNKGEQGSKGVQGRMGLKGE 1188

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
            KGD G  GP G+ G EG        G PG  G  G  G+PG  G  G PG  G  GIPG+
Sbjct: 1189 KGDAGVQGPPGLIGSEGV------PGVPGVKGFMGLPGIPGGQGFPGAPGNKGNMGIPGQ 1242

Query: 223  DGLPGKDGIPGTNGTNGEKGMTGPRGNR-----------GKSGINGVPGTPAICAYKRES 271
             G  G  G PGT+G  G  G  G  G +           G+ G  G PG P +   K E 
Sbjct: 1243 KGQKGSPGFPGTSGDPGPTGYGGFPGEKGDPGYPSPGLPGEPGPKGDPGAPGVLGRKGEK 1302

Query: 272  CS 273
             S
Sbjct: 1303 GS 1304



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 75/152 (49%), Gaps = 15/152 (9%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------GDMGYPGP 171
            IG  G  G +G  G  G +G KG  G       QG PGD+G  GP       G+ G  G 
Sbjct: 1123 IGSPGNPGIRGSFGFPGLKGRKGLLGA------QGEPGDKGFPGPSETLVVIGNKGEQGS 1176

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKDGLPGK 228
            +G+ G  G +G KGD G  G  GL G +G+PG PG+    G+PG  G  G PG  G  G 
Sbjct: 1177 KGVQGRMGLKGEKGDAGVQGPPGLIGSEGVPGVPGVKGFMGLPGIPGGQGFPGAPGNKGN 1236

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             GIPG  G  G  G  G  G+ G +G  G PG
Sbjct: 1237 MGIPGQKGQKGSPGFPGTSGDPGPTGYGGFPG 1268



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 90/209 (43%), Gaps = 63/209 (30%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK-----------RGPKGDM 166
            IG  G  G  GE G+ GERG +G  G+ GPPG +G PG  G+           RG KGDM
Sbjct: 1353 IGPPGAAGYPGENGLAGERGNQGQDGMPGPPGAKGEPGAPGRGIPGLQGVPGRRGVKGDM 1412

Query: 167  GYPGP------QGIPGDEGKRGPKGDMGYPGR-----------------IGLDGRDGLPG 203
            G PG       +G+ GD+G  GP G MG PG                   G DGR G+PG
Sbjct: 1413 GLPGFPGPPGMKGLQGDQGPLGPPGLMGLPGFQGATGMAITGPKGNRGIAGADGRPGIPG 1472

Query: 204  EPGLDGIP--------GRNGMDGI------------PGKDGLPGKDGIPGTNG------- 236
              GL G+P        G  G DGI            PG  G+ G+ G PG  G       
Sbjct: 1473 FQGLPGLPTMSIKGSKGVRGADGIQGPMGPAGDSGPPGPKGVEGRPGYPGARGDPGFLGF 1532

Query: 237  --TNGEKGMTGPRGNRGKSGINGVPGTPA 263
                GEKG  GP G RG  G  G  G P 
Sbjct: 1533 PGVKGEKGNQGPPGPRGAEGPRGPKGQPG 1561



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 83/172 (48%), Gaps = 34/172 (19%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------------EGKR 160
            G+ GP G KGE GA G          +G PG+ G PG +G+ GD            +G +
Sbjct: 1378 GMPGPPGAKGEPGAPG----------RGIPGLQGVPGRRGVKGDMGLPGFPGPPGMKGLQ 1427

Query: 161  GPKGDMGYPGPQGIPGDEGK-----RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
            G +G +G PG  G+PG +G       GPKG+       G+ G DG PG PG  G+PG   
Sbjct: 1428 GDQGPLGPPGLMGLPGFQGATGMAITGPKGNR------GIAGADGRPGIPGFQGLPGLPT 1481

Query: 216  MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
            M  I G  G+ G DGI G  G  G+ G  GP+G  G+ G  G  G P    +
Sbjct: 1482 MS-IKGSKGVRGADGIQGPMGPAGDSGPPGPKGVEGRPGYPGARGDPGFLGF 1532



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 77/168 (45%), Gaps = 34/168 (20%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +QG      +  PPG +G  G+ G  GA+G+ G  G  G KG  G  GPPGP+G    E
Sbjct: 1495 GIQGPMGPAGDSGPPGPKGVEGRPGYPGARGDPGFLGFPGVKGEKGNQGPPGPRGA---E 1551

Query: 158  GKRGPKGDMG-------------YPGP---------------QGIPGDEGKRGPKGDMGY 189
            G RGPKG  G              PG                QG+ G  G +GPKG  G 
Sbjct: 1552 GPRGPKGQPGNYCPPGVSERIFSVPGSKGPPGLPGIPGTPGDQGVQGIPGLQGPKGVKGL 1611

Query: 190  PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
            PG  G  G+ G PG  G  G PG+ G    PG  G PG  G+PG+ GT
Sbjct: 1612 PGSFGRPGQPGRPGPKGDRGFPGQRGQ---PGLIGFPGLQGLPGSPGT 1656



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 103/255 (40%), Gaps = 58/255 (22%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE--------------MGVKGERGEKGA 141
            L+ + GF  +T       + GP G +G  GA G               M +KG +G +GA
Sbjct: 1438 LMGLPGFQGATGMA----ITGPKGNRGIAGADGRPGIPGFQGLPGLPTMSIKGSKGVRGA 1493

Query: 142  PGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD---EGKRGPKGDMGYPGRIGLDGR 198
             G+ GP GP G  G  G +G +G  GYPG +G PG     G +G KG+ G PG  G +G 
Sbjct: 1494 DGIQGPMGPAGDSGPPGPKGVEGRPGYPGARGDPGFLGFPGVKGEKGNQGPPGPRGAEGP 1553

Query: 199  DGLPGEPG----------------------------------LDGIPG---RNGMDGIPG 221
             G  G+PG                                  + GIPG     G+ G+PG
Sbjct: 1554 RGPKGQPGNYCPPGVSERIFSVPGSKGPPGLPGIPGTPGDQGVQGIPGLQGPKGVKGLPG 1613

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
              G PG+ G PG  G  G  G  G  G  G  G+ G+PG+P            +    + 
Sbjct: 1614 SFGRPGQPGRPGPKGDRGFPGQRGQPGLIGFPGLQGLPGSPGTITTGPTRRGFIFTRHSQ 1673

Query: 282  QLLIPPTIVGSEHIF 296
               IP    G+  I+
Sbjct: 1674 STKIPSCPSGTSQIY 1688



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 30/219 (13%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------------------DEGKRGPKGDM 166
           G  G  G  G RG+ G PG  G PGP+G PG                  D+G++G KG+ 
Sbjct: 699 GTPGLPGSPGPRGQDGIPGREGTPGPKGAPGSPGAPGFPGPQGPPGFKGDQGRKGSKGEP 758

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GY  P+G  G++G  G +GD G  G  G  GR G  G  G  G  G  G  G  G+ GLP
Sbjct: 759 GYVYPEGPKGEQGDPGARGDKGRKGSSGFLGRPGSKGHKGSKGEEGLAGSKGDRGQPGLP 818

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT---PAICAYKRESCSLLPNSETSQL 283
           G  G+PG  G  G  G  GP+G RG  G  G+PG    P     K E+  + P       
Sbjct: 819 GNPGLPGEMGLPGLPGY-GPQGIRGVKGSKGLPGPHGLPGEAGLKGETIRIAPLPALPGP 877

Query: 284 LIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPS 322
             P  + GS  +        + GD         GHP P+
Sbjct: 878 QGPDGLPGSPGVPGRVGTSGQPGD--------VGHPGPT 908



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 76/181 (41%), Gaps = 55/181 (30%)

Query: 132 VKGER-----------GEKGAPGVVGPPGPQGIPGDEGKRGPKG---------------- 164
           +KG+            G  G PG  GP G  GIPG EG  GPKG                
Sbjct: 683 MKGDEACMCTDCSYIPGTPGLPGSPGPRGQDGIPGREGTPGPKGAPGSPGAPGFPGPQGP 742

Query: 165 -----DMG-----------YP----GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
                D G           YP    G QG PG  G +G KG  G+ GR G  G  G  GE
Sbjct: 743 PGFKGDQGRKGSKGEPGYVYPEGPKGEQGDPGARGDKGRKGSSGFLGRPGSKGHKGSKGE 802

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIP--------GTNGTNGEKGMTGPRGNRGKSGIN 256
            GL G  G  G  G+PG  GLPG+ G+P        G  G  G KG+ GP G  G++G+ 
Sbjct: 803 EGLAGSKGDRGQPGLPGNPGLPGEMGLPGLPGYGPQGIRGVKGSKGLPGPHGLPGEAGLK 862

Query: 257 G 257
           G
Sbjct: 863 G 863



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 83/189 (43%), Gaps = 43/189 (22%)

Query: 112  PGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG+QG   P G++G +G+KG++G  G          +G PG  G PG+ G  G  G+ G 
Sbjct: 1037 PGVQGATGPPGRRGSLGSKGKLGPPG----------LGIPGIYGKPGEPGLIGLLGNTGL 1086

Query: 169  PGPQGIPGDEGKRGPKGDMGYPG------------RIGLDGRDGLPGEPGLDGIPGRNGM 216
            PG +G  G  G  G  G  G PG            RIG  G  G+ G  G  G+ GR G+
Sbjct: 1087 PGLKGQSGRPGVSGVPGPRGEPGIMGPLGIPGPPGRIGSPGNPGIRGSFGFPGLKGRKGL 1146

Query: 217  ---DGIPGKDGLP---------------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
                G PG  G P               G  G+ G  G  GEKG  G +G  G  G  GV
Sbjct: 1147 LGAQGEPGDKGFPGPSETLVVIGNKGEQGSKGVQGRMGLKGEKGDAGVQGPPGLIGSEGV 1206

Query: 259  PGTPAICAY 267
            PG P +  +
Sbjct: 1207 PGVPGVKGF 1215



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 14/89 (15%)

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP--------GTNGTN 238
            G+PGR G+ G +G  G+ G  G PGR G  GIPG DG+ G  G P        G  G  
Sbjct: 293 AGHPGRSGVPGCNGTKGDRGFPGPPGRRGAPGIPGVDGIKGDKGCPADGYDQGYGAKGDP 352

Query: 239 GEKGMTGPRGNR------GKSGINGVPGT 261
           G  G+ GP+G +      G++G  G+PGT
Sbjct: 353 GFPGIPGPQGAQGVQGYPGETGPRGLPGT 381



 Score = 43.1 bits (100), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 46/96 (47%), Gaps = 14/96 (14%)

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD-------- 217
            G+PG  G+PG  G    KGD G+PG     GR G PG PG+DGI G  G          
Sbjct: 293 AGHPGRSGVPGCNGT---KGDRGFPG---PPGRRGAPGIPGVDGIKGDKGCPADGYDQGY 346

Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G  G PG  G  G  G  G  G TGPRG  G S
Sbjct: 347 GAKGDPGFPGIPGPQGAQGVQGYPGETGPRGLPGTS 382


>gi|6753482|ref|NP_034056.1| collagen alpha-2(XI) chain precursor [Mus musculus]
 gi|3811389|gb|AAC69905.1| collagen alpha-2 (XI) [Mus musculus]
 gi|147897943|gb|AAI40440.1| Collagen, type XI, alpha 2 [synthetic construct]
 gi|151357865|emb|CAO78020.1| procollagen, type XI, alpha 2 [Mus musculus]
          Length = 1650

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 88/197 (44%), Gaps = 51/197 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE GA+G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 574 PGPQGAIGPHGEKGARGKPGLPGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 633

Query: 172 QGI---------------------------------------PGDEGKRGPKGDMGY--- 189
           +G+                                       PG  G+ GP+G  G    
Sbjct: 634 RGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGP 693

Query: 190 ---PGRIGLDGRDGLPGEPGLDGIPGRNG------MDGIPGKDGLPGKDGIPGTNGTNGE 240
              PG  GL G  G  G PGL G PGR G        G PG  G  G  G+ G +G  GE
Sbjct: 694 TGDPGPTGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGE 753

Query: 241 KGMTGPRGNRGKSGING 257
           +G TGPRG RG  G  G
Sbjct: 754 RGPTGPRGQRGPRGATG 770



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/149 (46%), Positives = 82/149 (55%), Gaps = 18/149 (12%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG++GVKG+RGE G PG  G  GP+G    +G+ GP GD   P
Sbjct: 644 GLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEG---PKGRTGPTGD---P 697

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G+ G++GK G  G  GYPGR G  G  G PG PG  G  G  G+          GK 
Sbjct: 698 GPTGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLS---------GKS 748

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G  G  G +G  GPRG  GKSG  G 
Sbjct: 749 GPRGERGPTGPRGQRGPRGATGKSGAKGT 777



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 83/157 (52%), Gaps = 18/157 (11%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------GPKGDM 166
           G +G  G +G +G  GE+G +G PG+ G PG  G+PG  GK             GP+G +
Sbjct: 569 GAQGLPGPQGAIGPHGEKGARGKPGLPGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPL 628

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GYPGP+G+ G +G RG KG  G        G DG PG  G  G+ G  G  G+PG  G  
Sbjct: 629 GYPGPRGVKGVDGIRGLKGHKGE------KGEDGFPGFKGDIGVKGDRGEVGVPGSRGED 682

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G +G  G  G  G+ G TG  G +GK G+ G+PG P 
Sbjct: 683 GPEGPKGRTGPTGDPGPTGLMGEKGKLGVPGLPGYPG 719



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 97/218 (44%), Gaps = 51/218 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PGL G  GQ+G+ GA+G  G  GE GE+G  G +   GP+G+PG+ G R           
Sbjct: 478 PGLPGEKGQRGDTGAQGLPGPPGEDGERGDDGEI---GPRGLPGESGPRGLLGPKGPPGI 534

Query: 161 -------------GPKGDMGY------------PGPQGIPGDEGKRGP---KGDMGYPGR 192
                        GPKG +G             PG QG+PG +G  GP   KG  G PG 
Sbjct: 535 PGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGAQGLPGPQGAIGPHGEKGARGKPGL 594

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMD---------GIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G+ G DGLPG PG +G PG  G           G PG  G+ G DGI G  G  GEKG 
Sbjct: 595 PGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGE 654

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
            G  G +G  G+ G  G   +   + E     P   T 
Sbjct: 655 DGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTG 692



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 79/165 (47%), Gaps = 30/165 (18%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KG+RGE G PG  G PGP       G+ GP G +G  GP G PG EG++G KG  G P
Sbjct: 1202 GAKGDRGEDGEPGQPGSPGPT------GENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDP 1255

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---------------- 234
            G +G  G+ G  G  GL G PG +G+ G+PG  G  G+ G  G                 
Sbjct: 1256 GAVGAPGKTGPVGPAGLAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLR 1315

Query: 235  --NGTNGEK------GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               G  GEK      G+ GP G +G+ G  G+PG       K E+
Sbjct: 1316 GDAGAKGEKGHPGLIGLIGPTGEQGEKGDRGLPGPQGSPGQKGET 1360



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 91/203 (44%), Gaps = 54/203 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+GQ G  G KGE G  G +G +G  G+ GPPG             +G+PG+ G  
Sbjct: 410 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGM- 468

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----- 215
             KGD G+ G  G+PG++G+RG  G  G PG  G DG  G  GE G  G+PG +G     
Sbjct: 469 --KGDRGFDGLPGLPGEKGQRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLL 526

Query: 216 ----------------MDGIPGKDG---------------LPGKDGIPGTNGTNGEKGMT 244
                           MDG  G  G                PG  G+PG  G  G  G  
Sbjct: 527 GPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGAQGLPGPQGAIGPHGE- 585

Query: 245 GPRGNRGKSGINGVPGTPAICAY 267
             +G RGK G+ G+PG+  +  +
Sbjct: 586 --KGARGKPGLPGMPGSDGLPGH 606



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 79/164 (48%), Gaps = 33/164 (20%)

Query: 125  GAKGEMGVKGERGEKGAPGVVG---PP------GPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GAKG+ G  GE G+ G+PG  G   PP      GP G PG EG++G KG  G PG  G P
Sbjct: 1202 GAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAP 1261

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM------------------D 217
               GK GP G  G  G+ G DG  GLPG  G  G PG  G                    
Sbjct: 1262 ---GKTGPVGPAGLAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDA 1318

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGV 258
            G  G+ G PG  G+ G  G  GEK   G+ GP+G+ G+ G  G+
Sbjct: 1319 GAKGEKGHPGLIGLIGPTGEQGEKGDRGLPGPQGSPGQKGETGI 1362



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 97/230 (42%), Gaps = 57/230 (24%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G         P G QG  G  G+ G +G  G  G RG  G PG+ G  G  G+PG  
Sbjct: 422 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGMKGDRGFDGLPGLP 481

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIG-------------------- 194
           G++G +GD G  G  G PG++G+RG  G++   G PG  G                    
Sbjct: 482 GEKGQRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVR 541

Query: 195 -LDGRDGLPGE---------------PGLDGIP---------------GRNGMDGIPGKD 223
            +DG  G  G                PG  G+P               G+ G+ G+PG D
Sbjct: 542 GMDGPHGPKGSLGPQGEPGPPGQQGTPGAQGLPGPQGAIGPHGEKGARGKPGLPGMPGSD 601

Query: 224 GL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           GL   PGK+G PGT G  G  G  GP G  G  G+ GV G   +  +K E
Sbjct: 602 GLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 651



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 74/140 (52%), Gaps = 21/140 (15%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G MG  G  G  G PG    PG +G  GD G +GP+G  G  GP   PG  G+R   
Sbjct: 401 GPPGPMGYTGRPGPLGQPGS---PGLKGESGDLGPQGPRGPQGLTGP---PGKAGRR--- 451

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEK 241
                 GR G DG  G+PGEPG+ G  G +G+ G+PG+ G     G  G+PG  G +GE+
Sbjct: 452 ------GRAGADGARGMPGEPGMKGDRGFDGLPGLPGEKGQRGDTGAQGLPGPPGEDGER 505

Query: 242 ---GMTGPRGNRGKSGINGV 258
              G  GPRG  G+SG  G+
Sbjct: 506 GDDGEIGPRGLPGESGPRGL 525



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 71/149 (47%), Gaps = 27/149 (18%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
            G    T E  PPG   P+G++G  G  G  G +GE+G KG PG VG PG   P G  G  
Sbjct: 1217 GSPGPTGENGPPG---PLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGLA 1273

Query: 158  GKRGPKGDMGYPGP---QGIPGDEGKR------------------GPKGDMGYPGRIGLD 196
            GK GP G  G PG    QG PG  G+                   G KG+ G+PG IGL 
Sbjct: 1274 GKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLI 1333

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1334 GPTGEQGEKGDRGLPGPQGSPGQKGETGI 1362



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 79/188 (42%), Gaps = 42/188 (22%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP------ 169
            GP G  G +G  G  G KGE GE G+PGV G PG +G  G+ G++G  G  G        
Sbjct: 1109 GPQGSPGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQAGEAGPPGPK 1168

Query: 170  ------GPQGIP---------------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                  GP+G P                     G +G RG  G+ G PG  G  G +G P
Sbjct: 1169 GPTGDNGPKGNPGPVGFPGDPGPPGEAGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPP 1228

Query: 203  GE---------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G          PG +G  G  G  G PG  G PGK G  G  G  G+ G  G RG  G  
Sbjct: 1229 GPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGLAGKPGPDGLRGLPGSV 1288

Query: 254  GINGVPGT 261
            G  G PG 
Sbjct: 1289 GQQGRPGA 1296



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 86/227 (37%), Gaps = 84/227 (37%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKR-------------- 160
             G  GE GA+G  G  G +G++G  G  GPPGP   QG+PG  G++              
Sbjct: 1036 AGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDGGPMGPPGP 1095

Query: 161  -------------------------GPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGR 192
                                     GP G+ G PG  G PG +G+   +GP+G+ G  G 
Sbjct: 1096 PGPRGPAGPNGADGPQGSPGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGE 1155

Query: 193  IGLDG---------------------------------------RDGLPGEPGLDGIPGR 213
             G  G                                       +DG  G+ G DG PG+
Sbjct: 1156 SGQAGEAGPPGPKGPTGDNGPKGNPGPVGFPGDPGPPGEAGPRGQDGAKGDRGEDGEPGQ 1215

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G++G PG  G  G  GT G +G  G +G +G  G  G PG
Sbjct: 1216 PGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPG 1262



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 97/274 (35%), Gaps = 114/274 (41%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +  ++G      E   PG +G IG KG+   +GE+GV G RGE G  G  G  GP G PG
Sbjct: 642 IRGLKGHKGEKGEDGFPGFKGDIGVKGD---RGEVGVPGSRGEDGPEGPKGRTGPTGDPG 698

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG---------RIGLDGRDGLPGEPG 206
             G  G KG +G PG   +PG  G++GPKG +G+PG           GL G+ G  GE G
Sbjct: 699 PTGLMGEKGKLGVPG---LPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERG 755

Query: 207 LDGIPGRNGMDGIPGKD------------------GLPG------------------KDG 230
             G  G+ G  G  GK                   GLPG                  KDG
Sbjct: 756 PTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPAGKDG 815

Query: 231 IPGTNGTNGE---------------------KGMTGPRGNRGKS---------------- 253
           +PG  G  GE                      G +GP G RG S                
Sbjct: 816 LPGHPGQRGEVGFQGKTGPPGPPGVVGPQGTAGESGPMGERGHSGPPGPPGEQGLPGTSG 875

Query: 254 --------------------------GINGVPGT 261
                                     G  G+PGT
Sbjct: 876 KEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGT 909


>gi|148699893|gb|EDL31840.1| procollagen, type VI, alpha 1, isoform CRA_b [Mus musculus]
          Length = 643

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 66/121 (54%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
           GE+G PG+ G  G  G PG  G  GP G  G  G +G  G++G RGPKG  G  G+ G+D
Sbjct: 300 GERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGID 359

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G DG+ GE G  G+PG  G  G  G  G PG  G  G  G  GEKG  G  G  G+ G +
Sbjct: 360 GVDGMKGETGYPGLPGCKGSPGFDGIQGPPGPKGDAGAFGMKGEKGEAGADGEAGRPGNS 419

Query: 257 G 257
           G
Sbjct: 420 G 420



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 85/205 (41%), Gaps = 64/205 (31%)

Query: 113 GLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGP---------------------- 147
           G+QGP G KG+ GA   KGE G  G  GE G PG  G                       
Sbjct: 384 GIQGPPGPKGDAGAFGMKGEKGEAGADGEAGRPGNSGSPGDEGDPGEPGPPGEKGEAGDE 443

Query: 148 -----------------------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
                                  PG +G  GD G+ GP+GD G  GP GIPGD G+ GP 
Sbjct: 444 GNAGPDGAPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPVGIPGDSGEAGPI 503

Query: 185 GDMGYPGRIGLDGRDGLP---------------GEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G  GY G  G  G +GL                GE G DG PG NG +G PG  G PG  
Sbjct: 504 GPKGYRGDEGPPGPEGLRGAPGPVGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYPGNR 562

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSG 254
           G PG NGT G  G+ G  G  G  G
Sbjct: 563 GPPGLNGTKGYPGLKGDEGEVGDPG 587



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 84/190 (44%), Gaps = 30/190 (15%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G      E   PG  G +G  G  G KGE G +GE+G +G  G  G  G +GI G +G +
Sbjct: 306 GLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMK 365

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----- 215
           G  G  G PG +G PG +G +GP G  G  G  G+ G  G  G  G  G PG +G     
Sbjct: 366 GETGYPGLPGCKGSPGFDGIQGPPGPKGDAGAFGMKGEKGEAGADGEAGRPGNSGSPGDE 425

Query: 216 ----------MDGIPGKDGLPGKDGI---------------PGTNGTNGEKGMTGPRGNR 250
                       G  G +G  G DG                PG  G  G+ G  GP+G++
Sbjct: 426 GDPGEPGPPGEKGEAGDEGNAGPDGAPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQ 485

Query: 251 GKSGINGVPG 260
           G+ G  G+PG
Sbjct: 486 GREGPVGIPG 495



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 76/149 (51%), Gaps = 18/149 (12%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD 165
           PG++GP G  GE G +G+ G +G  G  G  G  GP GP+G       PG EG RG  G 
Sbjct: 467 PGVRGPRGDPGEAGPQGDQGREGPVGIPGDSGEAGPIGPKGYRGDEGPPGPEGLRGAPGP 526

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           +G PG  G+ G+ G+ GP G+       G +G  G PG PG  G PG NG  G PG  G 
Sbjct: 527 VGPPGDPGLMGERGEDGPPGN-------GTEGFPGFPGYPGNRGPPGLNGTKGYPGLKGD 579

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
            G+ G PG +  +       PRG +G  G
Sbjct: 580 EGEVGDPGEDNND-----ISPRGVKGAKG 603


>gi|73972475|ref|XP_538855.2| PREDICTED: collagen alpha-2(XI) chain isoform 1 [Canis lupus
           familiaris]
          Length = 1733

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 89/197 (45%), Gaps = 51/197 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE G +G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 657 PGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 716

Query: 172 QGIPG------------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGE--- 204
           +G+ G                        D G +G +G++G PG  G DG +G  G    
Sbjct: 717 RGVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGP 776

Query: 205 ------------------PGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGE 240
                             PGL G PGR       G  G PG  G  G  G+ G +G  GE
Sbjct: 777 TGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGE 836

Query: 241 KGMTGPRGNRGKSGING 257
           +G TGPRG RG  G  G
Sbjct: 837 RGPTGPRGQRGPRGATG 853



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 80/161 (49%), Gaps = 24/161 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G +GE G  G+ G  G  GE G PG +G  GP G+PG EG++G KG  G PG  G PG  
Sbjct: 1288 GDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGMPGPEGRQGEKGAKGDPGAVGAPG-- 1345

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------------------GIP 220
             K GP G  G  G+ G DG  GLPG  G  G PG  G                    G  
Sbjct: 1346 -KTGPVGPAGPAGKTGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDVGAK 1404

Query: 221  GKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G+ G PG  G+   PG  G  G++G+ GP+G+ G+ G  G+
Sbjct: 1405 GEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGQKGETGI 1445



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 95/204 (46%), Gaps = 54/204 (26%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRG 161
           PPG  G  G+ G  GA+G   E GVKG+RG  G PG+ G  G       QG+PG  G+ G
Sbjct: 527 PPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG 586

Query: 162 PKGDMGYPGPQGIPGDEGKRG------------------------PKGDM---------- 187
            +GD G  GP+G+PG+ G RG                        PKG +          
Sbjct: 587 ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPG 646

Query: 188 --------GYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   G PG    IG  G  G  G+PGL G+PG +G  G PGK+G PG  G  G +G
Sbjct: 647 QQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 706

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GPRG +G  GI G+ G
Sbjct: 707 PQGPLGYPGPRGVKGVDGIRGLKG 730



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 88/191 (46%), Gaps = 51/191 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------- 161
           PGL G  G +G+ GA+G  G  GE GE+G  G +GP   +G+PG+ G RG          
Sbjct: 561 PGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGP---RGLPGESGPRGLLGPKGPPGI 617

Query: 162 --------------PKGDM------------------GYPGPQGIPGDEGKRGPKGDMGY 189
                         PKG +                  G PGPQG  G  G++GP+G  G 
Sbjct: 618 PGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGL 677

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG   + G DG PG PG +G PG  G  G  G     G  G PG  G  G  G+ G +G+
Sbjct: 678 PG---MPGSDGPPGHPGKEGPPGTKGNQGPSGPQ---GPLGYPGPRGVKGVDGIRGLKGH 731

Query: 250 RGKSGINGVPG 260
           +G+ G +G PG
Sbjct: 732 KGEKGEDGFPG 742



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 78/165 (47%), Gaps = 30/165 (18%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KG+RGE G PG  G PGP G      + GP G +G  GP G+PG EG++G KG  G P
Sbjct: 1285 GAKGDRGEDGEPGQPGSPGPTG------ENGPPGPLGKRGPAGMPGPEGRQGEKGAKGDP 1338

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN--------------- 235
            G +G  G+ G  G  G  G  G +G+ G+PG  G  G+ G  G                 
Sbjct: 1339 GAVGAPGKTGPVGPAGPAGKTGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLR 1398

Query: 236  ---GTNGEK------GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               G  GEK      G+ GP G +G+ G  G+PG       K E+
Sbjct: 1399 GDVGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGQKGET 1443



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 74/140 (52%), Gaps = 21/140 (15%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G MG  G  G  G PG    PG +G  GD G +GP+G  G  GP   PG  G+R   
Sbjct: 484 GPPGPMGYTGRPGPLGQPGS---PGLKGESGDLGPQGPRGPQGLTGP---PGKAGRR--- 534

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEK 241
                 GR G DG  G+PGEPG+ G  G +G+ G+PG+ G     G  G+PG  G +GE+
Sbjct: 535 ------GRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGER 588

Query: 242 ---GMTGPRGNRGKSGINGV 258
              G  GPRG  G+SG  G+
Sbjct: 589 GDDGEIGPRGLPGESGPRGL 608



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 96/230 (41%), Gaps = 57/230 (24%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G         P G QG  G  G+ G +G  G  G RG  G PGV G  G  G+PG  
Sbjct: 505 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLP 564

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIG-------------------- 194
           G++G +GD G  G  G PG++G+RG  G++   G PG  G                    
Sbjct: 565 GEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVR 624

Query: 195 -LDGRDGLPGE---------------PGLDGIP---------------GRNGMDGIPGKD 223
            +DG  G  G                PG  G+P               G+ G+ G+PG D
Sbjct: 625 GMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSD 684

Query: 224 GL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G    PGK+G PGT G  G  G  GP G  G  G+ GV G   +  +K E
Sbjct: 685 GPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 734



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 71/149 (47%), Gaps = 27/149 (18%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
            G    T E  PPG   P+G++G  G  G  G +GE+G KG PG VG PG   P G  G  
Sbjct: 1300 GSPGPTGENGPPG---PLGKRGPAGMPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPA 1356

Query: 158  GKRGPKGDMGYPGP---QGIPGDEGKR------------------GPKGDMGYPGRIGLD 196
            GK GP G  G PG    QG PG  G+                   G KG+ G+PG IGL 
Sbjct: 1357 GKTGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDVGAKGEKGHPGLIGLI 1416

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1417 GPPGEQGEKGDRGLPGPQGSAGQKGETGI 1445



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 85/204 (41%), Gaps = 57/204 (27%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  G+ G +G  G  G+KGE G+ G     GP GPQG+ G  GK G +G  G  G
Sbjct: 485 PPGPMGYTGRPGPLGQPGSPGLKGESGDLGP---QGPRGPQGLTGPPGKAGRRGRAGADG 541

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            +G+PG+ G    KGD G+ G  GL G  G  G+ G  G+PG  G DG  G DG  G  G
Sbjct: 542 ARGMPGEPGV---KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRG 598

Query: 231 IPGT------------------------NGTNGEKGM----------------------- 243
           +PG                         +G +G KG                        
Sbjct: 599 LPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPG 658

Query: 244 ----TGPRGNRGKSGINGVPGTPA 263
                GP G +G  G  G+PG P 
Sbjct: 659 PQGAIGPHGEKGPRGKPGLPGMPG 682



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 74/180 (41%), Gaps = 48/180 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------GPPG--- 149
            PPG +G  G+ G  G +GE GVKG RGE+G  G                    GP G   
Sbjct: 1205 PPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDDGPKGNPG 1264

Query: 150  ------------------PQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMG 188
                                G  GD G+ G  G  G PGP    G PG  GKRGP    G
Sbjct: 1265 PVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGP---AG 1321

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTG 245
             PG  G  G  G  G+PG  G PG+ G  G  G  G  G D   G+PG+ G  G  G TG
Sbjct: 1322 MPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKTGPDGLRGLPGSVGQQGRPGATG 1381



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 56/144 (38%), Gaps = 49/144 (34%)

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG----------------------- 206
           GP GI G+ G  G  G+ G PGR GL G DG PG PG                       
Sbjct: 408 GPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQ 467

Query: 207 --------------LDGIP------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                         L G P      GR G  G PG  GL G+ G  G  G  G +G+TGP
Sbjct: 468 EAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP 527

Query: 247 ------RGNRGKSGINGVPGTPAI 264
                 RG  G  G  G+PG P +
Sbjct: 528 PGKAGRRGRAGADGARGMPGEPGV 551



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 72/179 (40%), Gaps = 48/179 (26%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------------GPKGDM 166
            G  G KGE GE G+PGV G PG +G  G+ G++                     GPKG+ 
Sbjct: 1204 GPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDDGPKGNP 1263

Query: 167  ------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                                    G  G  G PG  G  GP G+ G PG +G  G  G+P
Sbjct: 1264 GPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGMP 1323

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G    +G  G  G  G PG  G PGK G  G  G  G+ G  G RG  G  G  G PG 
Sbjct: 1324 GP---EGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKTGPDGLRGLPGSVGQQGRPGA 1379



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 87/252 (34%), Gaps = 108/252 (42%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKR-------------- 160
             G  GE GA+G  G  G +G++G  G  GPPGP   QG+PG  G++              
Sbjct: 1119 AGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGP 1178

Query: 161  -------------------------GPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPG- 191
                                     GP G+ G PG  G PG +G+   +GP+G+ G  G 
Sbjct: 1179 PGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGE 1238

Query: 192  --------------------------------------------RIGLDGRDGLPGEPGL 207
                                                        + G  G  G  GEPG 
Sbjct: 1239 SGQPGEAGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQ 1298

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------------------TGPRGN 249
             G PG  G +G PG  G  G  G+PG  G  GEKG                    GP G 
Sbjct: 1299 PGSPGPTGENGPPGPLGKRGPAGMPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGK 1358

Query: 250  RGKSGINGVPGT 261
             G  G+ G+PG+
Sbjct: 1359 TGPDGLRGLPGS 1370


>gi|148678302|gb|EDL10249.1| procollagen, type XI, alpha 2 [Mus musculus]
          Length = 1650

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 88/197 (44%), Gaps = 51/197 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE GA+G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 574 PGPQGAIGPHGEKGARGKPGLPGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 633

Query: 172 QGI---------------------------------------PGDEGKRGPKGDMGY--- 189
           +G+                                       PG  G+ GP+G  G    
Sbjct: 634 RGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGP 693

Query: 190 ---PGRIGLDGRDGLPGEPGLDGIPGRNG------MDGIPGKDGLPGKDGIPGTNGTNGE 240
              PG  GL G  G  G PGL G PGR G        G PG  G  G  G+ G +G  GE
Sbjct: 694 TGDPGPTGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGE 753

Query: 241 KGMTGPRGNRGKSGING 257
           +G TGPRG RG  G  G
Sbjct: 754 RGPTGPRGQRGPRGATG 770



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/149 (46%), Positives = 82/149 (55%), Gaps = 18/149 (12%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG++GVKG+RGE G PG  G  GP+G    +G+ GP GD   P
Sbjct: 644 GLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEG---PKGRTGPTGD---P 697

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G+ G++GK G  G  GYPGR G  G  G PG PG  G  G  G+          GK 
Sbjct: 698 GPTGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLS---------GKS 748

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G  G  G +G  GPRG  GKSG  G 
Sbjct: 749 GPRGERGPTGPRGQRGPRGATGKSGAKGT 777



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 83/157 (52%), Gaps = 18/157 (11%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------GPKGDM 166
           G +G  G +G +G  GE+G +G PG+ G PG  G+PG  GK             GP+G +
Sbjct: 569 GAQGLPGPQGAIGPHGEKGARGKPGLPGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPL 628

Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
           GYPGP+G+ G +G RG KG  G        G DG PG  G  G+ G  G  G+PG  G  
Sbjct: 629 GYPGPRGVKGVDGIRGLKGHKGE------KGEDGFPGFKGDIGVKGDRGEVGVPGSRGED 682

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G +G  G  G  G+ G TG  G +GK G+ G+PG P 
Sbjct: 683 GPEGPKGRTGPTGDPGPTGLMGEKGKLGVPGLPGYPG 719



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 96/204 (47%), Gaps = 54/204 (26%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRG 161
           PPG  G  G+ G  GA+G   E GVKG+RG  G PG+ G  G       QG+PG  G+ G
Sbjct: 444 PPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGQRGDTGAQGLPGPPGEDG 503

Query: 162 PKGDMGYPGPQGIPGDEGKRG------------------------PKGDM---------- 187
            +GD G  GP+G+PG+ G RG                        PKG +          
Sbjct: 504 ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPG 563

Query: 188 --------GYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   G PG    IG  G  G  G+PGL G+PG +G+ G PGK+G PG  G  G +G
Sbjct: 564 QQGTPGAQGLPGPQGAIGPHGEKGARGKPGLPGMPGSDGLPGHPGKEGPPGTKGNQGPSG 623

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GPRG +G  GI G+ G
Sbjct: 624 PQGPLGYPGPRGVKGVDGIRGLKG 647



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 97/218 (44%), Gaps = 51/218 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PGL G  GQ+G+ GA+G  G  GE GE+G  G +   GP+G+PG+ G R           
Sbjct: 478 PGLPGEKGQRGDTGAQGLPGPPGEDGERGDDGEI---GPRGLPGESGPRGLLGPKGPPGI 534

Query: 161 -------------GPKGDMGY------------PGPQGIPGDEGKRGP---KGDMGYPGR 192
                        GPKG +G             PG QG+PG +G  GP   KG  G PG 
Sbjct: 535 PGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGAQGLPGPQGAIGPHGEKGARGKPGL 594

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMD---------GIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G+ G DGLPG PG +G PG  G           G PG  G+ G DGI G  G  GEKG 
Sbjct: 595 PGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGE 654

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETS 281
            G  G +G  G+ G  G   +   + E     P   T 
Sbjct: 655 DGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTG 692



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 79/165 (47%), Gaps = 30/165 (18%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KG+RGE G PG  G PGP       G+ GP G +G  GP G PG EG++G KG  G P
Sbjct: 1202 GAKGDRGEDGEPGQPGSPGPT------GENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDP 1255

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---------------- 234
            G +G  G+ G  G  GL G PG +G+ G+PG  G  G+ G  G                 
Sbjct: 1256 GAVGAPGKTGPVGPAGLAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLR 1315

Query: 235  --NGTNGEK------GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               G  GEK      G+ GP G +G+ G  G+PG       K E+
Sbjct: 1316 GDAGAKGEKGHPGLIGLIGPTGEQGEKGDRGLPGPQGSPGQKGET 1360



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 91/203 (44%), Gaps = 54/203 (26%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------GPQGIPGDEGKR 160
           G  GP+GQ G  G KGE G  G +G +G  G+ GPP            G +G+PG+ G  
Sbjct: 410 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGV- 468

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----- 215
             KGD G+ G  G+PG++G+RG  G  G PG  G DG  G  GE G  G+PG +G     
Sbjct: 469 --KGDRGFDGLPGLPGEKGQRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLL 526

Query: 216 ----------------MDGIPGKDG---------------LPGKDGIPGTNGTNGEKGMT 244
                           MDG  G  G                PG  G+PG  G  G  G  
Sbjct: 527 GPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGAQGLPGPQGAIGPHGE- 585

Query: 245 GPRGNRGKSGINGVPGTPAICAY 267
             +G RGK G+ G+PG+  +  +
Sbjct: 586 --KGARGKPGLPGMPGSDGLPGH 606



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 97/230 (42%), Gaps = 57/230 (24%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G         P G QG  G  G+ G +G  G  G RG  G PGV G  G  G+PG  
Sbjct: 422 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLP 481

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIG-------------------- 194
           G++G +GD G  G  G PG++G+RG  G++   G PG  G                    
Sbjct: 482 GEKGQRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVR 541

Query: 195 -LDGRDGLPGE---------------PGLDGIP---------------GRNGMDGIPGKD 223
            +DG  G  G                PG  G+P               G+ G+ G+PG D
Sbjct: 542 GMDGPHGPKGSLGPQGEPGPPGQQGTPGAQGLPGPQGAIGPHGEKGARGKPGLPGMPGSD 601

Query: 224 GL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           GL   PGK+G PGT G  G  G  GP G  G  G+ GV G   +  +K E
Sbjct: 602 GLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 651



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 79/164 (48%), Gaps = 33/164 (20%)

Query: 125  GAKGEMGVKGERGEKGAPGVVG---PP------GPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GAKG+ G  GE G+ G+PG  G   PP      GP G PG EG++G KG  G PG  G P
Sbjct: 1202 GAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAP 1261

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM------------------D 217
               GK GP G  G  G+ G DG  GLPG  G  G PG  G                    
Sbjct: 1262 ---GKTGPVGPAGLAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDA 1318

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGV 258
            G  G+ G PG  G+ G  G  GEK   G+ GP+G+ G+ G  G+
Sbjct: 1319 GAKGEKGHPGLIGLIGPTGEQGEKGDRGLPGPQGSPGQKGETGI 1362



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 74/140 (52%), Gaps = 21/140 (15%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G MG  G  G  G PG    PG +G  GD G +GP+G  G  GP   PG  G+R   
Sbjct: 401 GPPGPMGYTGRPGPLGQPGS---PGLKGESGDLGPQGPRGPQGLTGP---PGKAGRR--- 451

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEK 241
                 GR G DG  G+PGEPG+ G  G +G+ G+PG+ G     G  G+PG  G +GE+
Sbjct: 452 ------GRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGQRGDTGAQGLPGPPGEDGER 505

Query: 242 ---GMTGPRGNRGKSGINGV 258
              G  GPRG  G+SG  G+
Sbjct: 506 GDDGEIGPRGLPGESGPRGL 525



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 71/149 (47%), Gaps = 27/149 (18%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
            G    T E  PPG   P+G++G  G  G  G +GE+G KG PG VG PG   P G  G  
Sbjct: 1217 GSPGPTGENGPPG---PLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGLA 1273

Query: 158  GKRGPKGDMGYPGP---QGIPGDEGKR------------------GPKGDMGYPGRIGLD 196
            GK GP G  G PG    QG PG  G+                   G KG+ G+PG IGL 
Sbjct: 1274 GKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLI 1333

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1334 GPTGEQGEKGDRGLPGPQGSPGQKGETGI 1362



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 79/188 (42%), Gaps = 42/188 (22%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP------ 169
            GP G  G +G  G  G KGE GE G+PGV G PG +G  G+ G++G  G  G        
Sbjct: 1109 GPQGSPGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQAGEAGPPGPK 1168

Query: 170  ------GPQGIP---------------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                  GP+G P                     G +G RG  G+ G PG  G  G +G P
Sbjct: 1169 GPTGDNGPKGNPGPVGFPGDPGPPGEAGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPP 1228

Query: 203  GE---------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
            G          PG +G  G  G  G PG  G PGK G  G  G  G+ G  G RG  G  
Sbjct: 1229 GPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGLAGKPGPDGLRGLPGSV 1288

Query: 254  GINGVPGT 261
            G  G PG 
Sbjct: 1289 GQQGRPGA 1296



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 86/227 (37%), Gaps = 84/227 (37%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKR-------------- 160
             G  GE GA+G  G  G +G++G  G  GPPGP   QG+PG  G++              
Sbjct: 1036 AGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDGGPMGPPGP 1095

Query: 161  -------------------------GPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGR 192
                                     GP G+ G PG  G PG +G+   +GP+G+ G  G 
Sbjct: 1096 PGPRGPAGPNGADGPQGSPGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGE 1155

Query: 193  IGLDG---------------------------------------RDGLPGEPGLDGIPGR 213
             G  G                                       +DG  G+ G DG PG+
Sbjct: 1156 SGQAGEAGPPGPKGPTGDNGPKGNPGPVGFPGDPGPPGEAGPRGQDGAKGDRGEDGEPGQ 1215

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G++G PG  G  G  GT G +G  G +G +G  G  G PG
Sbjct: 1216 PGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPG 1262



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 97/274 (35%), Gaps = 114/274 (41%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           +  ++G      E   PG +G IG KG+   +GE+GV G RGE G  G  G  GP G PG
Sbjct: 642 IRGLKGHKGEKGEDGFPGFKGDIGVKGD---RGEVGVPGSRGEDGPEGPKGRTGPTGDPG 698

Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG---------RIGLDGRDGLPGEPG 206
             G  G KG +G PG   +PG  G++GPKG +G+PG           GL G+ G  GE G
Sbjct: 699 PTGLMGEKGKLGVPG---LPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERG 755

Query: 207 LDGIPGRNGMDGIPGKD------------------GLPG------------------KDG 230
             G  G+ G  G  GK                   GLPG                  KDG
Sbjct: 756 PTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPAGKDG 815

Query: 231 IPGTNGTNGE---------------------KGMTGPRGNRGKS---------------- 253
           +PG  G  GE                      G +GP G RG S                
Sbjct: 816 LPGHPGQRGEVGFQGKTGPPGPPGVVGPQGTAGESGPMGERGHSGPPGPPGEQGLPGTSG 875

Query: 254 --------------------------GINGVPGT 261
                                     G  G+PGT
Sbjct: 876 KEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGT 909


>gi|345788851|ref|XP_003433143.1| PREDICTED: collagen alpha-1(IV) chain [Canis lupus familiaris]
          Length = 1617

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 103/213 (48%), Gaps = 31/213 (14%)

Query: 49   DNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGFCNSTKE 108
            +  VP  P  + VP    E+  + EK Q               + +P + + G      E
Sbjct: 972  EKGVPGIPGPQGVPGLPGEKGAKGEKGQ---------------AGLPGIGIPGRPGDKGE 1016

Query: 109  YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
                G  G  G+KGE G+ G  G+ G  G KG PG VG PG  G+PG+      KGD G 
Sbjct: 1017 QGISGFPGSPGEKGEKGSAGVPGIPGSPGPKGLPGTVGYPGSPGLPGE------KGDKGL 1070

Query: 169  PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            PG  GIPG       KG+ G PG+ G  G  G  GEPG DGIPG  G  G P   GLPG+
Sbjct: 1071 PGSDGIPGI------KGEAGLPGQPGPTGPAGQKGEPGSDGIPGSVGEKGEP---GLPGR 1121

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G PG  G  GEKG  G  G  G++G  G+PG+
Sbjct: 1122 -GFPGFPGAKGEKGSKGDVGFPGQAGSPGIPGS 1153



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 99/202 (49%), Gaps = 34/202 (16%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQ 151
            V   G   +  E   PG+ GP   +G  G  GE G KGE+G+ G PG+      G  G Q
Sbjct: 961  VGGMGLPGTPGEKGVPGIPGP---QGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGEQ 1017

Query: 152  GI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
            GI   PG  G++G KG  G PG   IPG  G +G  G +GYPG  GL G  G  G PG D
Sbjct: 1018 GISGFPGSPGEKGEKGSAGVPG---IPGSPGPKGLPGTVGYPGSPGLPGEKGDKGLPGSD 1074

Query: 209  GIPGRNGMDGIPGKDGL---------PGKDGIPGTNGTNGEKGMT-----------GPRG 248
            GIPG  G  G+PG+ G          PG DGIPG+ G  GE G+            G +G
Sbjct: 1075 GIPGIKGEAGLPGQPGPTGPAGQKGEPGSDGIPGSVGEKGEPGLPGRGFPGFPGAKGEKG 1134

Query: 249  NRGKSGINGVPGTPAICAYKRE 270
            ++G  G  G  G+P I   K E
Sbjct: 1135 SKGDVGFPGQAGSPGIPGSKGE 1156



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 88/159 (55%), Gaps = 23/159 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            GQKG+ G KG++G  G++G +G PG  G PG  G  G  G+ GPKGD G  G  G PG  
Sbjct: 896  GQKGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLP 955

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--------G 230
            G +G  G MG PG          PGE G+ GIPG  G+ G+PG+ G  G+         G
Sbjct: 956  GPKGSVGGMGLPG---------TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIG 1006

Query: 231  IPGTNGTNGEKGMT------GPRGNRGKSGINGVPGTPA 263
            IPG  G  GE+G++      G +G +G +G+ G+PG+P 
Sbjct: 1007 IPGRPGDKGEQGISGFPGSPGEKGEKGSAGVPGIPGSPG 1045



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 88/172 (51%), Gaps = 30/172 (17%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL G  GQ+G  G  G  G KGE G  G PG  G PGP G+PG  G+   KGD G+PG  
Sbjct: 806 GLPGLPGQQGTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPGLPGE---KGDHGFPGSS 862

Query: 173 GIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGLD 208
           G  GD G +G KGD+G PG+                        IG  G  G  G+PG  
Sbjct: 863 GPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDPGTP 922

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+PG++G  G PG+   PG  G PG  GT G  G+ GP+G+ G  G+ G PG
Sbjct: 923 GVPGKDGQAGHPGQ---PGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPGTPG 971



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 90/172 (52%), Gaps = 28/172 (16%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
            GP G KG  G  G  GV G+ G+ G PG  GP   PG  G PG  G  GPKG +      
Sbjct: 908  GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLP 967

Query: 167  ---------GYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP--- 211
                     G PGPQG+   PG++G +G KG  G PG IG+ GR G  GE G+ G P   
Sbjct: 968  GTPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPG-IGIPGRPGDKGEQGISGFPGSP 1026

Query: 212  ---GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
               G  G  G+PG  G PG  G+PGT G  G  G+ G +G++G  G +G+PG
Sbjct: 1027 GEKGEKGSAGVPGIPGSPGPKGLPGTVGYPGSPGLPGEKGDKGLPGSDGIPG 1078



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 92/177 (51%), Gaps = 28/177 (15%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE------KGAPGVVG-P--PGPQGI---PGDEGK 159
            PG  GP G  G  G  G  G+ G +G        G PG  G P  PGPQG+   PG++G 
Sbjct: 934  PGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGVPGLPGEKGA 993

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGR 213
            +G KG  G PG  GIPG  G +G +G  G+PG  G  G        G+PG PG  G+PG 
Sbjct: 994  KGEKGQAGLPG-IGIPGRPGDKGEQGISGFPGSPGEKGEKGSAGVPGIPGSPGPKGLPGT 1052

Query: 214  NGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGINGVPGT 261
             G  G P      G  GLPG DGIPG  G     G+ G TGP G +G+ G +G+PG+
Sbjct: 1053 VGYPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGQPGPTGPAGQKGEPGSDGIPGS 1109



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 82/170 (48%), Gaps = 24/170 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------RGP 162
            PG  GP G  G  G KG+ G  G  G +G PG  G  G  G+PG  G          +G 
Sbjct: 838  PGSPGPAGLPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQ 897

Query: 163  KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP-- 220
            KGD G  G  G  GD+G R   GD G PG  G DG+ G PG+PG  G PG  G  G P  
Sbjct: 898  KGDQGEKGQIGPTGDKGSR---GDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGL 954

Query: 221  ----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                      G  G PG+ G+PG  G  G  G+ G +G +G+ G  G+PG
Sbjct: 955  PGPKGSVGGMGLPGTPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPG 1004



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 85/175 (48%), Gaps = 38/175 (21%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVV----GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG 176
           KG+ G  G  G  G+ G KG  G V    GPPG QG+PG  G +GP+GD G+PG  G PG
Sbjct: 565 KGQAGFPGIPGSPGQPGPKGEAGKVVPLPGPPGAQGLPGSPGFQGPQGDRGFPGTPGRPG 624

Query: 177 DEGKRGP--------------------KGDM------------GYPGRIGLDGRDGLPG- 203
             G++G                      GD+            G PG  G+ G+ G PG 
Sbjct: 625 LPGEKGAIGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNGLPGNPGVPGQKGEPGI 684

Query: 204 -EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             PGL G+PG  G+ G PG+ G  G  G+PG +G  G  G+ G RG+ G  G+ G
Sbjct: 685 GLPGLKGLPGLPGIPGTPGEKGNIGGPGVPGEHGAIGPPGLQGIRGDPGPPGLQG 739



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 76/155 (49%), Gaps = 23/155 (14%)

Query: 132 VKGERGEKGAPGV--VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG- 188
           VKGE+G  G PG+   GP G +G  G  G  G  G  G PG QG PG  G  GPKG+MG 
Sbjct: 772 VKGEKGFPGFPGLDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGPKGEMGV 831

Query: 189 -----YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG------LPGKDG------- 230
                 PG  G  G  GLPGE G  G PG +G  G PG  G      LPGK G       
Sbjct: 832 MGTPGQPGSPGPAGLPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDM 891

Query: 231 --IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
             + G  G  GEKG  GP G++G  G  G PG P 
Sbjct: 892 GSMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGVPG 926



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 83/200 (41%), Gaps = 60/200 (30%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  GP GQKGE G+ G  G  GE+GE G PG   P    G PG +G++G KGD+G+PG 
Sbjct: 1089 PGPTGPAGQKGEPGSDGIPGSVGEKGEPGLPGRGFP----GFPGAKGEKGSKGDVGFPGQ 1144

Query: 172  QGIPGDEGKRG--------------------------PKGDM------------------ 187
             G PG  G +G                          PKGD                   
Sbjct: 1145 AGSPGIPGSKGEPGFLGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPVGPP 1204

Query: 188  ------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
                        G PG  G  G  G  GEPG  G+PG  G  GI G  G  G  G+PG  
Sbjct: 1205 GLPGLDGLKGDKGNPGWPGAPGAPGPKGEPGFQGLPGIGGSPGITGSKGDMGPPGVPGFQ 1264

Query: 236  GTNGEKGMTGPRGNRGKSGI 255
            G  G  G+ G +G++G  G 
Sbjct: 1265 GQKGLPGLQGAKGDQGDQGF 1284



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 86/204 (42%), Gaps = 55/204 (26%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
            PGL G  G KG  G+ G  G+KGE G  G PG  GP G +G PG +G  G  G+ G PG 
Sbjct: 1059 PGLPGEKGDKGLPGSDGIPGIKGEAGLPGQPGPTGPAGQKGEPGSDGIPGSVGEKGEPGL 1118

Query: 171  PQ----GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------------- 207
            P     G PG +G++G KGD+G+PG+ G  G  G  GEPG                    
Sbjct: 1119 PGRGFPGFPGAKGEKGSKGDVGFPGQAGSPGIPGSKGEPGFLGPPGPQGQPGLPGAPGHA 1178

Query: 208  -------------------------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                                           DG+ G  G  G PG  G PG  G PG  G
Sbjct: 1179 VEGPKGDRGPQGQPGLPGLPGPVGPPGLPGLDGLKGDKGNPGWPGAPGAPGPKGEPGFQG 1238

Query: 237  TNGEKGMTGPRGNRGKSGINGVPG 260
              G  G  G  G++G  G  GVPG
Sbjct: 1239 LPGIGGSPGITGSKGDMGPPGVPG 1262



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 84/181 (46%), Gaps = 51/181 (28%)

Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----DE 178
           EIG  G+ G KG+RG  G  G+ G PGPQG+PG          MG PG +G PG    D 
Sbjct: 435 EIGFPGQPGAKGDRGLPGRDGLEGLPGPQGVPGL---------MGQPGAKGEPGEIYFDA 485

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
             +G KGD G+PG+                G+PGR G  G  G  GLPG  G PG+ G  
Sbjct: 486 RLKGDKGDPGFPGQ---------------PGMPGRAGSPGRDGHPGLPGPKGSPGSVGLK 530

Query: 239 GEKGMTGP------RG-----------------NRGKSGINGVPGTPAICAYKRESCSLL 275
           GE+G  G       RG                 ++G++G  G+PG+P     K E+  ++
Sbjct: 531 GERGPPGGVGFPGSRGDIGPPGPPGFGPIGPVGDKGQAGFPGIPGSPGQPGPKGEAGKVV 590

Query: 276 P 276
           P
Sbjct: 591 P 591



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 87/198 (43%), Gaps = 65/198 (32%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGI--------------- 174
           +G KGERG  GAPG+ G PGP+G PG +G+ GP        P GI               
Sbjct: 343 LGEKGERGYPGAPGLRGEPGPKGFPGLQGQPGP--------PDGIVECQPGPPGDQGPPG 394

Query: 175 -------PGDEGKRGPKGD----------------------MGYPGRIGLDGRDGLPGEP 205
                   G+ G++G KGD                      +G+PG+ G  G  GLPG  
Sbjct: 395 IPGQPGLTGEVGEKGQKGDSCLVCDMAGLRGPPGPQGPPGEIGFPGQPGAKGDRGLPGRD 454

Query: 206 GLDGIPGRNGMDGI---PGKDGLPGK-------DGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           GL+G+PG  G+ G+   PG  G PG+        G  G  G  G+ GM G  G+ G+ G 
Sbjct: 455 GLEGLPGPQGVPGLMGQPGAKGEPGEIYFDARLKGDKGDPGFPGQPGMPGRAGSPGRDGH 514

Query: 256 NGVP---GTPAICAYKRE 270
            G+P   G+P     K E
Sbjct: 515 PGLPGPKGSPGSVGLKGE 532



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 58/107 (54%), Gaps = 18/107 (16%)

Query: 127 KGEMGV--KGERGEKGAPGVVGPPGPQGIPG--------DEGKRGPKGDMGYPGPQGIPG 176
           KG+MG+  +G +G+KG  GV GPPG   +PG        D   +G KG  G PG QG+PG
Sbjct: 220 KGQMGLSFQGPKGDKGDQGVSGPPG---VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPG 276

Query: 177 -----DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
                + GK GP+G  G  G  G  G  G PG+ G  G+PGR G  G
Sbjct: 277 VGEKGEPGKPGPRGKPGKDGEKGEKGSPGFPGDSGYPGLPGREGFKG 323



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 104/260 (40%), Gaps = 95/260 (36%)

Query: 112 PGLQG--PIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------ 160
           PG QG   +G+KGE G    +G+ G  GE+GEKG+PG  G  G  G+PG EG +      
Sbjct: 269 PGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGSPGFPGDSGYPGLPGREGFKGDKGEA 328

Query: 161 ---------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYP--------------- 190
                          G KG+ GYPG  G+ G+ G +G  G  G P               
Sbjct: 329 GPPGPPGIAIGPGPLGEKGERGYPGAPGLRGEPGPKGFPGLQGQPGPPDGIVECQPGPPG 388

Query: 191 --------------GRIGLDGRDG-------------------------LPGEPGLD--- 208
                         G +G  G+ G                          PG+PG     
Sbjct: 389 DQGPPGIPGQPGLTGEVGEKGQKGDSCLVCDMAGLRGPPGPQGPPGEIGFPGQPGAKGDR 448

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE-------KGMTGPRGNRGKSGINGVPGT 261
           G+PGR+G++G+PG  G+PG  G PG  G  GE       KG  G  G  G+ G+ G  G+
Sbjct: 449 GLPGRDGLEGLPGPQGVPGLMGQPGAKGEPGEIYFDARLKGDKGDPGFPGQPGMPGRAGS 508

Query: 262 PAICAYKRESCSLLPNSETS 281
           P      R+    LP  + S
Sbjct: 509 PG-----RDGHPGLPGPKGS 523



 Score = 43.1 bits (100), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 72/177 (40%), Gaps = 55/177 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMG-------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
           PG QG  G  G+ GAKGE G       +KG++G+ G PG  G PG  G PG +G      
Sbjct: 460 PGPQGVPGLMGQPGAKGEPGEIYFDARLKGDKGDPGFPGQPGMPGRAGSPGRDGHP---- 515

Query: 165 DMGYPGPQGIPGDEGKRGP--------------------------------KGDMGYPGR 192
             G PGP+G PG  G +G                                 KG  G+PG 
Sbjct: 516 --GLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDIGPPGPPGFGPIGPVGDKGQAGFPGI 573

Query: 193 IGLDGRDG----------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            G  G+ G          LPG PG  G+PG  G  G  G  G PG  G PG  G  G
Sbjct: 574 PGSPGQPGPKGEAGKVVPLPGPPGAQGLPGSPGFQGPQGDRGFPGTPGRPGLPGEKG 630


>gi|139948691|ref|NP_001077313.1| collagen alpha-1(XI) chain [Danio rerio]
 gi|124481619|gb|AAI33084.1| Zgc:158335 protein [Danio rerio]
          Length = 1736

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 85/155 (54%), Gaps = 9/155 (5%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGPPGPQGIPGDEGKRGPKGD 165
           PG QGPIG  G  G KG  GV+G +G KG       PG  G  G +G  G+ G  GP+G+
Sbjct: 681 PGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGELGLAGPRGE 740

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  GP+G  G  G+ GP+G  G  G++G+    GLPG PG  G  G  G  G PG +G 
Sbjct: 741 DGPEGPKGRAGPNGESGPQGSAGEKGKLGV---PGLPGYPGRQGPKGSTGFPGFPGANGE 797

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G+ G  G  G++G TGPRG RG  G  G PG
Sbjct: 798 KGGRGVAGKAGPRGQRGPTGPRGARGARGPTGKPG 832



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 88/211 (41%), Gaps = 75/211 (35%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
           PPG  G  G++G  GA G  G+ GE G KG  G  G PG   +PG++G R          
Sbjct: 500 PPGQIGKPGKRGRAGADGARGMPGESGSKGDRGFDGLPG---LPGEKGHRGETGPAGPPG 556

Query: 161 -----GPKGDMGYPGPQGIPGD------------------------EGKRGPKGDM---- 187
                GP+G+ G  GP+G+ G+                        +G +GPKG+M    
Sbjct: 557 PTGEDGPRGEDGEIGPRGLAGESGPRGLLGPRGPPGPPGQPGIAGVDGPQGPKGNMGPQG 616

Query: 188 -----------------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
                                  G PG  G  GR GLPG PG DG PG       PGK+G
Sbjct: 617 EPGPPGQQGIPGGQGLPGPQGPIGPPGEKGPQGRSGLPGLPGADGPPGH------PGKEG 670

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            PG+ G  G  G  G  G  GPRG +G  G+
Sbjct: 671 PPGEKGALGQPGPQGPIGYPGPRGVKGADGV 701



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 55/103 (53%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GL GP G+ G  G KG  G  GE G +G+ G  G  G  G+PG  G++GPKG  G+PG  
Sbjct: 733 GLAGPRGEDGPEGPKGRAGPNGESGPQGSAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFP 792

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           G  G++G RG  G  G  G+ G  G  G  G  G  G PG  G
Sbjct: 793 GANGEKGGRGVAGKAGPRGQRGPTGPRGARGARGPTGKPGPKG 835



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 60/125 (48%), Gaps = 24/125 (19%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----- 176
            G  G +GE G KGE G +G PG  GP GPQ   G  GK GP+G  G PGP G  G     
Sbjct: 1300 GAEGRQGEKGAKGEAGLEGPPGKTGPVGPQ---GPSGKPGPEGLRGIPGPVGEQGLPGAP 1356

Query: 177  ----------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                             +G  G KG+ G+PG IGL G  G  GE G  G+PG  G  G  
Sbjct: 1357 GQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGAAGSK 1416

Query: 221  GKDGL 225
            G +G+
Sbjct: 1417 GDNGI 1421



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 65/152 (42%), Gaps = 39/152 (25%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           KG +G  G PG+ G  GP G PG EG  G KG +G PGPQG             +GYP  
Sbjct: 645 KGPQGRSGLPGLPGADGPPGHPGKEGPPGEKGALGQPGPQG------------PIGYP-- 690

Query: 193 IGLDGRDGLPGEPGLD---------------------GIPGRNGMDGIPGKDGLPGKDGI 231
               G  G+ G  G+                      G+ G  G  G+ G  G  G +G 
Sbjct: 691 ----GPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGELGLAGPRGEDGPEGP 746

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G NGE G  G  G +GK G+ G+PG P 
Sbjct: 747 KGRAGPNGESGPQGSAGEKGKLGVPGLPGYPG 778



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 57/125 (45%), Gaps = 24/125 (19%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------- 207
            G EG++G KG  G  G +G PG  G  GP+G  G PG  GL G  G  GE GL       
Sbjct: 1300 GAEGRQGEKGAKGEAGLEGPPGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAPGQD 1359

Query: 208  --------------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                           G PG  G  G PG  GL    G PG  G  G++G+ GP+G  G  
Sbjct: 1360 GPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGL---IGPPGEQGEKGDRGLPGPQGAAGSK 1416

Query: 254  GINGV 258
            G NG+
Sbjct: 1417 GDNGI 1421



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 72/145 (49%), Gaps = 24/145 (16%)

Query: 140 GAPGVVGPPGPQGIPGDEGKRGPKGDM-------GYPGPQG--IPGDEGK---------- 180
           G PG  GPPG  G+PG +G  GP G M       G  G +G  +   E +          
Sbjct: 397 GDPGDRGPPGRAGLPGADGLPGPPGTMLMLPFRFGGDGEKGPVVSAQEAQAQAILSQARL 456

Query: 181 --RGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
             RGP G MG  GR   +GL G  GL GE G  G  G  G+ G PG+ G PGK G  G +
Sbjct: 457 AMRGPPGPMGLTGRSGPVGLPGPPGLKGESGDHGPQGPRGIQGPPGQIGKPGKRGRAGAD 516

Query: 236 GTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  G +G +G+RG  G+ G+PG
Sbjct: 517 GARGMPGESGSKGDRGFDGLPGLPG 541



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 62/126 (49%), Gaps = 24/126 (19%)

Query: 146 GPPGPQGIPG---------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG---RI 193
           GPPGP G+ G           G +G  GD G  GP+GI      +GP G +G PG   R 
Sbjct: 460 GPPGPMGLTGRSGPVGLPGPPGLKGESGDHGPQGPRGI------QGPPGQIGKPGKRGRA 513

Query: 194 GLDGRDGLPGEPG------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G DG  G+PGE G       DG+PG  G  G  G+ G  G  G  G +G  GE G  GPR
Sbjct: 514 GADGARGMPGESGSKGDRGFDGLPGLPGEKGHRGETGPAGPPGPTGEDGPRGEDGEIGPR 573

Query: 248 GNRGKS 253
           G  G+S
Sbjct: 574 GLAGES 579



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
           KG  G  GP GP+GI      +GP G +G PG +G  G +G RG  G+ G  G  G DG 
Sbjct: 483 KGESGDHGPQGPRGI------QGPPGQIGKPGKRGRAGADGARGMPGESGSKGDRGFDGL 536

Query: 199 DGLPGEPG 206
            GLPGE G
Sbjct: 537 PGLPGEKG 544



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QGP   KG  G  G  G  GE+G +G  G  GP G +G  G  G RG +G  G PGP
Sbjct: 777 PGRQGP---KGSTGFPGFPGANGEKGGRGVAGKAGPRGQRGPTGPRGARGARGPTGKPGP 833

Query: 172 QG 173
           +G
Sbjct: 834 KG 835


>gi|334349376|ref|XP_001378056.2| PREDICTED: collagen alpha-1(II) chain-like [Monodelphis domestica]
          Length = 1078

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 86/183 (46%), Gaps = 21/183 (11%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           LV  +G      E   PG QG  G +G  G  G  G KG  G  G  G  GPPG QG+PG
Sbjct: 285 LVGPRGERGFPGERGSPGAQGLQGARGLPGTPGTDGPKGATGPAGPNGAQGPPGLQGMPG 344

Query: 156 DEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIG 194
           + G       +G +GD+G  GP+G PG +G RG                KG+ G PG  G
Sbjct: 345 ERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGPNGEKGESGPPGPAG 404

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
             G  G PGE G  G PG  G  G PG DG PG  G  G +G  G+ G  GP+G  G  G
Sbjct: 405 TAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGPSGQKGDSGSPGPQGPSGAPG 464

Query: 255 ING 257
             G
Sbjct: 465 PQG 467



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 109/249 (43%), Gaps = 43/249 (17%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG-- 155
            + G   +  E  P GL GP G  G+ G  GE G+ G RG  G PG  GP G  G  G  
Sbjct: 113 GLAGPKGAPGERGPSGLGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 172

Query: 156 ----------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
                      +G RG  G MG+PGP+G  G+ GK G KG  G PG  GL G+DG     
Sbjct: 173 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEAGKAGEKGLPGAPGLRGLPGKDGETGAA 232

Query: 203 ---------GEPGLDGIPGRNGMDGIPGK------------DGLPGKDGIPGTNGTNGEK 241
                    GE G  G PG +G  G+PG              G+PG+ G PG  G  GE+
Sbjct: 233 GPPGPAGPVGERGEQGAPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGER 292

Query: 242 GMTGPRGNRGKSGIN---GVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSS 298
           G  G RG+ G  G+    G+PGTP     K  +    PN        PP + G      +
Sbjct: 293 GFPGERGSPGAQGLQGARGLPGTPGTDGPKGATGPAGPNGAQG----PPGLQGMPGERGA 348

Query: 299 SPIVVREGD 307
           + I   +GD
Sbjct: 349 AGIAGPKGD 357



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 83/184 (45%), Gaps = 33/184 (17%)

Query: 104 NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-- 161
            +T    P G QGP G +G  G +G  G+ G +G++G    VG  GP+G PG +G RG  
Sbjct: 323 GATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRG---DVGEKGPEGAPGKDGGRGLT 379

Query: 162 -------------PKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                         KG+ G PGP      +G PG+ G+ GP G  G+ G  G DG+ G  
Sbjct: 380 GPIGPPGPAGPNGEKGESGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPGADGQPGAK 439

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE          G  G  G  G PG  G  G  G  G  G+TGP+G RG  G  G  G P
Sbjct: 440 GE---------QGPSGQKGDSGSPGPQGPSGAPGPQGPTGVTGPKGTRGAQGPPGATGFP 490

Query: 263 AICA 266
               
Sbjct: 491 GAAG 494



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 84/184 (45%), Gaps = 42/184 (22%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------------GPKGDM 166
           GQ G +G  G  G  GE G+ G  G+ G PG +G+PG +G+             G +G+ 
Sbjct: 188 GQPGVMGFPGPKGANGEAGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPVGERGEQ 247

Query: 167 GYPGP---------------------QGIPGDEGKRG---PKGDMGYPGR------IGLD 196
           G PGP                     QG+PG+ G  G   P+G+ G+PG        GL 
Sbjct: 248 GAPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQ 307

Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G  GLPG PG DG  G  G  G  G  G PG  G+PG  G  G  G  G RG+ G+ G  
Sbjct: 308 GARGLPGTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE 367

Query: 257 GVPG 260
           G PG
Sbjct: 368 GAPG 371



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 77/150 (51%), Gaps = 21/150 (14%)

Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDMGYPGPQGIPGDEGKRG 182
           E G +G RGE GA G VGPPG +G PG+      +G  GPKG  G  GP G+    G +G
Sbjct: 78  EEGKRGARGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGL---GGPKG 134

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------------GLPGKDG 230
             GD G PG  GL G  GL G PG  G  G+ G  G PG+D            G PG  G
Sbjct: 135 ANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMG 194

Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            PG  G NGE G  G +G  G  G+ G+PG
Sbjct: 195 FPGPKGANGEAGKAGEKGLPGAPGLRGLPG 224



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 79/161 (49%), Gaps = 18/161 (11%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           GE GA G +G +GERG   E+G+PG  G  G +G+PG  G  GPKG  G  GP G  G  
Sbjct: 278 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGARGLPGTPGTDGPKGATGPAGPNGAQGPP 337

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------PGKD 223
           G +G  G+ G  G  G  G  G  GE G +G PG++G  G+                G+ 
Sbjct: 338 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGPNGEKGES 397

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
           G PG  G  G  G  GE+G TGP G  G +G  G  G P  
Sbjct: 398 GPPGPAGTAGARGAPGERGETGPPGPAGFAGPPGADGQPGA 438



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 86/197 (43%), Gaps = 48/197 (24%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ G+PG  GP   PGP
Sbjct: 406 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGPSGQKGDSGSPGPQGPSGAPGP 465

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 466 QGPTGVTGPKGTRGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGASGKDGPKGSRGD 525

Query: 187 MGYPGRIGLDGRDGLPGEPGLDG------------------IPGRNGMDGIPGKDGLPGK 228
            G PGR G  G  G  G PG  G                  + G+ G+ G+PG+ G  G 
Sbjct: 526 TGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGF 585

Query: 229 DGIPGTNGTNGEKGMTG 245
            G+PG +G  G++G  G
Sbjct: 586 PGLPGPSGEPGKQGAPG 602



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 81/192 (42%), Gaps = 45/192 (23%)

Query: 118 IGQKGEIGAKGEMGVK------------------GERGEKGAPGVVGPPGPQGIPGDEGK 159
           +G++GE GA G  G +                  G  GE GAPG+VGP G +G PG+ G 
Sbjct: 241 VGERGEQGAPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGS 300

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG------- 212
            G +G  G  G  G PG +G +G  G  G  G  G  G  G+PGE G  GI G       
Sbjct: 301 PGAQGLQGARGLPGTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGD 360

Query: 213 --RNGMDGIPGKDG------------------LPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
               G +G PGKDG                    G+ G PG  GT G +G  G RG  G 
Sbjct: 361 VGEKGPEGAPGKDGGRGLTGPIGPPGPAGPNGEKGESGPPGPAGTAGARGAPGERGETGP 420

Query: 253 SGINGVPGTPAI 264
            G  G  G P  
Sbjct: 421 PGPAGFAGPPGA 432



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 64/156 (41%), Gaps = 21/156 (13%)

Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
           +KGE G  G  G  G RG  G  G  GPPGP G  G  G  G  G  G  GP G  GD G
Sbjct: 393 EKGESGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGPSGQKGDSG 452

Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG------------------ 221
             GP+G  G PG  G  G  G  G  G  G PG  G  G  G                  
Sbjct: 453 SPGPQGPSGAPGPQGPTGVTGPKGTRGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPG 512

Query: 222 ---KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
              KDG  G  G  G  G  G+ G+ GP G  G+ G
Sbjct: 513 ASGKDGPKGSRGDTGPPGRAGDPGLQGPAGAPGEKG 548



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 81/213 (38%), Gaps = 72/213 (33%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---------GPPGPQGIPGDEG----- 158
           G QGP GQKG+ G+ G  G  G  G +G  GV          GPPG  G PG  G     
Sbjct: 440 GEQGPSGQKGDSGSPGPQGPSGAPGPQGPTGVTGPKGTRGAQGPPGATGFPGAAGRVGPP 499

Query: 159 ----------------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR---------- 192
                           K GPKG  G  GP G  GD G +GP G  G  G           
Sbjct: 500 GSNGNPGPPGPPGASGKDGPKGSRGDTGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGPD 559

Query: 193 --------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------------------- 225
                    G  G  GLPG+ G  G PG  G  G PGK G                    
Sbjct: 560 GPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGSGDRGPPGPVGPPGLT 619

Query: 226 -----PGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                PG++G PG +G  G  G  G +G+RG++
Sbjct: 620 GPSGEPGREGSPGADGPPGRDGAAGVKGDRGET 652



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 88/260 (33%), Gaps = 99/260 (38%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
           QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 442 QGPSGQKGDSGSPGPQGPSGAPGPQGPTGVTGPKGTRGAQGPPGATGFPGAAGRVGPPGS 501

Query: 150 -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----------- 181
                            P+G  GD G  G  GD G  GP G PG++G+            
Sbjct: 502 NGNPGPPGPPGASGKDGPKGSRGDTGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGPDGP 561

Query: 182 -------GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN----------------- 214
                  G +G +G PG+ G  G  GLPG   EPG  G PG +                 
Sbjct: 562 PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGSGDRGPPGPVGPPGLTGP 621

Query: 215 ----------GMDGIPGKDGLPGKDG------------------------IPGTNGTNGE 240
                     G DG PG+DG  G  G                          G  G  GE
Sbjct: 622 SGEPGREGSPGADGPPGRDGAAGVKGDRGETGPVGGPGAPGPPGSPGPVGPTGKQGDRGE 681

Query: 241 KGMTGPRGNRGKSGINGVPG 260
            G  GP G  G +G  G+ G
Sbjct: 682 SGAQGPMGPAGPAGARGIAG 701


>gi|326924976|ref|XP_003208698.1| PREDICTED: collagen alpha-1(XI) chain-like [Meleagris gallopavo]
          Length = 1736

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 79/151 (52%), Gaps = 24/151 (15%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG+MG+KG+RGE      VG PGP+G      + GP+G  G  
Sbjct: 702 GLKGSKGEKGEDGFPGFKGDMGLKGDRGE------VGQPGPRG------EDGPEGPKGRA 749

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G PG  G  G KG +G P         GLPG PG  G  G  G  G PG +G  G  
Sbjct: 750 GPSGDPGAAGPAGEKGKLGVP---------GLPGYPGRQGPKGSTGFPGFPGANGEKGAR 800

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G+ G  G     G TGPRG+RG  G  G PG
Sbjct: 801 GLHGKPGPQRTAGPTGPRGSRGPRGPTGKPG 831



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 60/125 (48%), Gaps = 24/125 (19%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----- 176
            G  G +GE G KGE G +GAPG  GP GPQG     GK GP+G  G PGP G  G     
Sbjct: 1299 GAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGP---AGKPGPEGLRGIPGPVGEQGLPGAP 1355

Query: 177  ----------------DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                             +G  G KG+ G+PG IGL G  G  GE G  G+PG  G  G  
Sbjct: 1356 GQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGAK 1415

Query: 221  GKDGL 225
            G  G+
Sbjct: 1416 GDAGI 1420



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 58/125 (46%), Gaps = 24/125 (19%)

Query: 155  GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---- 210
            G EG++G KG  G PG +G PG  G  GP+G  G PG  GL G  G  GE GL G     
Sbjct: 1299 GAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAPGQD 1358

Query: 211  -----------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                             PG  G  G PG  GL    G PG  G  G++G+ GP+G+ G  
Sbjct: 1359 GPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGL---IGPPGEQGEKGDRGLPGPQGSPGAK 1415

Query: 254  GINGV 258
            G  G+
Sbjct: 1416 GDAGI 1420



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 95/278 (34%), Gaps = 102/278 (36%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---- 166
           P G+QG  G  G+ G +G  G  G RG  G PG  G  G  G+PG  G +G +GD     
Sbjct: 493 PRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKGNRGDRGPQG 552

Query: 167 --------------GYPGPQGIPGDEGKR------------------------GPKGDM- 187
                         G  GP+G+PG+ G R                        GPKG+M 
Sbjct: 553 PPGLPGEDGSRVKDGEVGPRGLPGEAGPRGLLGPRGTPGPPGQPGIAGIDGPSGPKGNMG 612

Query: 188 -----------------------------------GYPGRIGLDGRDGLPGEPGLD---- 208
                                              G PG  GL G DG PG PG +    
Sbjct: 613 PQGEPGPPGQQGIPGPQGLPGPQGPIGPPGEKGPQGKPGLPGLPGSDGPPGHPGKEGQSG 672

Query: 209 --------------------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
                               G+ G +G+ G+ G  G  G+DG PG  G  G KG  G  G
Sbjct: 673 EKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVG 732

Query: 249 NRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
             G  G +G  G         +  +  P  E  +L +P
Sbjct: 733 QPGPRGEDGPEGPKGRAGPSGDPGAAGPAGEKGKLGVP 770



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 54/113 (47%), Gaps = 15/113 (13%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK---GAPGVVGPPGPQ-- 151
           + ++G      +  P G  GP G KG  G  G+ G  G  GEK   G PG+ G PG Q  
Sbjct: 722 MGLKGDRGEVGQPGPRGEDGPEGPKGRAGPSGDPGAAGPAGEKGKLGVPGLPGYPGRQGP 781

Query: 152 -------GIPGDEGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIG 194
                  G PG  G++G +G  G PGPQ   G  G  G RGP+G  G PG  G
Sbjct: 782 KGSTGFPGFPGANGEKGARGLHGKPGPQRTAGPTGPRGSRGPRGPTGKPGPKG 834



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGY 168
           PGL G  G++G  G+ G  G  G  GEKGA G+ G PGPQ   G  G  G RGP+G  G 
Sbjct: 770 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGLHGKPGPQRTAGPTGPRGSRGPRGPTGK 829

Query: 169 PGPQGI 174
           PGP+G 
Sbjct: 830 PGPKGT 835



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG------PKGDMGYPGPQGIPGDEGKR 181
           GE G +G RG +GAPG  G  G +G PG +G RG       KGD G+ G  G+PGD+G R
Sbjct: 486 GEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKGNR 545

Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           G +G  G PG  G DG     GE G  G+PG  G  G+
Sbjct: 546 GDRGPQGPPGLPGEDGSRVKDGEVGPRGLPGEAGPRGL 583



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 65/137 (47%), Gaps = 36/137 (26%)

Query: 146 GPPGPQGI------------------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           GPPGP G+                   G+ G +GP+G  G PGP    G  GKR      
Sbjct: 459 GPPGPMGLTGRPGPVGGPGAAGAKGESGEPGPQGPRGVQGAPGPS---GKAGKR------ 509

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG------KDGIPGTNGTNGEK 241
              GR G DG  G+PGEPG  G  G +G+ G+PG  G  G        G+PG +G+  + 
Sbjct: 510 ---GRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKGNRGDRGPQGPPGLPGEDGSRVKD 566

Query: 242 GMTGPRGNRGKSGINGV 258
           G  GPRG  G++G  G+
Sbjct: 567 GEVGPRGLPGEAGPRGL 583



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 66/152 (43%), Gaps = 36/152 (23%)

Query: 148 PGPQGI------PGDEGKRGPKGDMGYP------GPQGIPGDEGKRGPK----------- 184
           PGPQG+       G  G++GP+G  G P      GP G PG EG+ G K           
Sbjct: 626 PGPQGLPGPQGPIGPPGEKGPQGKPGLPGLPGSDGPPGHPGKEGQSGEKGALGPPGPQGP 685

Query: 185 -------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
                        G  G  G  G  G DG PG  G  G+ G  G  G PG  G  G +G 
Sbjct: 686 IGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQPGPRGEDGPEGP 745

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G +G+ G  GP G +GK G+ G+PG P 
Sbjct: 746 KGRAGPSGDPGAAGPAGEKGKLGVPGLPGYPG 777



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 47/104 (45%), Gaps = 27/104 (25%)

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG--- 221
           + G PGPQG  G +G  GP G  G  GR G DG  G+PGEPG  G  G +G+ G+PG   
Sbjct: 484 ESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGLPGDKG 543

Query: 222 ---------------------KDGLPGKDGIPGTNGTNGEKGMT 244
                                KDG  G  G+PG  G    +G+ 
Sbjct: 544 NRGDRGPQGPPGLPGEDGSRVKDGEVGPRGLPGEAGP---RGLL 584



 Score = 42.7 bits (99), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 84/192 (43%), Gaps = 45/192 (23%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERG------------EKGAPGVVGP----------- 147
            P GL+G  G++G  GA+G  G+KG  G            E+GA G  GP           
Sbjct: 952  PAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPIGSPGERGAAGTAGPIGLPGRPGPQG 1011

Query: 148  ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
                 G +G PG++G +GP G  G  GP G+P      GP G  G PG  G  G  G PG
Sbjct: 1012 PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP------GPAGPSGSPGEDGDKGEIGEPG 1065

Query: 204  EPGLDGIPGRN------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
            + G  G  G N            G  GI G DG PG  G  G  G  G++G  G  G  G
Sbjct: 1066 QKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGPRGFPGPPG 1125

Query: 252  KSGINGVPGTPA 263
              G+ G+PG P 
Sbjct: 1126 PIGLQGLPGPPG 1137



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 56/150 (37%), Gaps = 57/150 (38%)

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG-------------------- 197
            GK G KGD   PGPQGIP   GK GP G  G+PG  GL G                    
Sbjct: 933  GKEGAKGD---PGPQGIP---GKDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPI 986

Query: 198  -------------------------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                                             G PGE G  G  GR+G+ G  G  G  
Sbjct: 987  GSPGERGAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPA 1046

Query: 227  GKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
            G  G PG +G  GE G  G +G++G  G N
Sbjct: 1047 GPSGSPGEDGDKGEIGEPGQKGSKGDKGEN 1076



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 67/157 (42%), Gaps = 51/157 (32%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------------ 163
            G+ GAKG+ G +G  G+ G  G+ G PG +G+PG +G  G K                  
Sbjct: 933  GKEGAKGDPGPQGIPGKDGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPIGSPGER 992

Query: 164  GDMGYPGP------------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
            G  G  GP                  +G PG++G +GP G  G  G +GL          
Sbjct: 993  GAAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGL---------- 1042

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                 PG  G  G PG+DG  G+ G PG  G+ G+KG
Sbjct: 1043 -----PGPAGPSGSPGEDGDKGEIGEPGQKGSKGDKG 1074


>gi|293344916|ref|XP_001079629.2| PREDICTED: collagen alpha-1(VI) chain [Rattus norvegicus]
 gi|293356747|ref|XP_215375.5| PREDICTED: collagen alpha-1(VI) chain [Rattus norvegicus]
 gi|149043683|gb|EDL97134.1| procollagen, type VI, alpha 1 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 1034

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 63/122 (51%), Gaps = 16/122 (13%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP----- 202
           PG +G  GD G+ GP+GD G  GP GIPGD G+ GP G  GY G  G  G +GL      
Sbjct: 444 PGVRGPRGDPGEAGPQGDQGREGPVGIPGDPGESGPIGPKGYRGDEGPPGPEGLRGAPGP 503

Query: 203 ----------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
                     GE G DG PG NG +G PG  G PG  G PG NGT G  G+ G  G  G 
Sbjct: 504 VGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYPGNRGPPGINGTKGYPGLKGDEGEAGD 562

Query: 253 SG 254
            G
Sbjct: 563 PG 564



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 80/143 (55%), Gaps = 6/143 (4%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG++GP G  GE G +G+ G +G  G  G PG  GP GP+G  GDEG  GP+G  G PGP
Sbjct: 444 PGVRGPRGDPGEAGPQGDQGREGPVGIPGDPGESGPIGPKGYRGDEGPPGPEGLRGAPGP 503

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            G PGD G  G +G+ G PG  G +G  G PG PG  G PG NG  G PG  G  G+ G 
Sbjct: 504 VGPPGDPGLMGERGEDGPPGN-GTEGFPGFPGYPGNRGPPGINGTKGYPGLKGDEGEAGD 562

Query: 232 PGTNGTNGEKGMTGPRGNRGKSG 254
           PG +  +       PRG +G  G
Sbjct: 563 PGEDNND-----VSPRGVKGAKG 580



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
           +GERG+ G PG  G  G  G PGD    GP G  G  G +G  G++G RGPKG  G  G+
Sbjct: 276 EGERGKPGLPGEKGEAGDPGRPGD---LGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGK 332

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
            G+DG DG+ GE G  G+PG  G  G  G  G PG  G  G  G
Sbjct: 333 RGIDGVDGMKGETGYPGLPGCKGSPGFDGIQGPPGPKGDAGAFG 376



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 6/107 (5%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G +G+ G+ GE+GE G PG  G  GP G  G +G++G +G+ G  GP+G  G++GKR   
Sbjct: 277 GERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKR--- 333

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
              G  G  G+ G  G PG PG  G PG +G+ G PG  G  G  G+
Sbjct: 334 ---GIDGVDGMKGETGYPGLPGCKGSPGFDGIQGPPGPKGDAGAFGL 377



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 83/200 (41%), Gaps = 57/200 (28%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDMGYPGPQGI 174
           +GE G  G  G KGE G+ G PG +GP G QG+ G++G       RGPKG  G  G +GI
Sbjct: 276 EGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGI 335

Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM------------------ 216
            G +G +G  G  G PG  G  G DG+ G PG  G  G  G+                  
Sbjct: 336 DGVDGMKGETGYPGLPGCKGSPGFDGIQGPPGPKGDAGAFGLKGEKGEAGAEGEAGRPGN 395

Query: 217 ------------------DGIPGKDGLPGKDG---------------IPGTNGTNGEKGM 243
                              G  G +G  G DG                PG  G  G+ G 
Sbjct: 396 SGPPGDEGEPGEPGPPGEKGEAGDEGNAGPDGAPGERGGPGERGPRGTPGVRGPRGDPGE 455

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            GP+G++G+ G  G+PG P 
Sbjct: 456 AGPQGDQGREGPVGIPGDPG 475



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 94/252 (37%), Gaps = 85/252 (33%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
           V  QG           G +GP G KGE G +G  GV G +GE G PG+ G  G  G  G 
Sbjct: 303 VGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMKGETGYPGLPGCKGSPGFDGI 362

Query: 157 EGKRGPKGDMGYPG------------------------------------PQGIPGDEGK 180
           +G  GPKGD G  G                                     +G  GDEG 
Sbjct: 363 QGPPGPKGDAGAFGLKGEKGEAGAEGEAGRPGNSGPPGDEGEPGEPGPPGEKGEAGDEGN 422

Query: 181 RG------------------------PKGDMGYPGRIGLDGRD---GLPGEPGLD---GI 210
            G                        P+GD G  G  G  GR+   G+PG+PG     G 
Sbjct: 423 AGPDGAPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPVGIPGDPGESGPIGP 482

Query: 211 PGRNGMDGIPGKDGL------------------PGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G +G PG +GL                   G+DG PG NGT G  G  G  GNRG 
Sbjct: 483 KGYRGDEGPPGPEGLRGAPGPVGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYPGNRGP 541

Query: 253 SGINGVPGTPAI 264
            GING  G P +
Sbjct: 542 PGINGTKGYPGL 553



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGR---IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
           Y G +G PG  G+   KG+ G PGR   +G  G  G+ GE G  G  G  G  G  G+ G
Sbjct: 275 YEGERGKPGLPGE---KGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKG 331

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G DG+ G  G  G  G+ G +G+ G  GI G PG
Sbjct: 332 KRGIDGVDGMKGETGYPGLPGCKGSPGFDGIQGPPG 367


>gi|149025954|gb|EDL82197.1| rCG28740, isoform CRA_b [Rattus norvegicus]
          Length = 398

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 96/188 (51%), Gaps = 21/188 (11%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYPGPQ 172
           GP GQKG IGA G  G+ G++GE G PG  G    PGP+G PG+EG+   KGD G  GP+
Sbjct: 173 GPPGQKGSIGAPGTPGMDGQKGEPGLPGAAGQSGLPGPKGEPGNEGE---KGDAGENGPK 229

Query: 173 GIPGDEGKRG--PKGDMGYPGRIGLDGRDG------------LPGEPGLDGIPGRNGMDG 218
           G  G++G  G    G  G PG  G  G+ G            + GEPG  G  G  G+ G
Sbjct: 230 GDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPG 289

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNS 278
           +PG  G  G+ G PG  G  G+ G  GP+G +G+SG  G  G+      K +S +L P  
Sbjct: 290 LPGTKGERGEAGPPG-RGERGDPGAPGPKGKQGESGARGPKGSKGDRGDKGDSGALGPRG 348

Query: 279 ETSQLLIP 286
              Q   P
Sbjct: 349 PPGQKGDP 356



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 79/169 (46%), Gaps = 25/169 (14%)

Query: 127 KGEMGVKGERGEKGAPGVVG--------PPGPQG---------------IPGDEGKRGPK 163
           KGE G +G RG  G P V            G QG                PGD GK GP+
Sbjct: 92  KGEQGDQGPRGLPGFPTVAALHSNQILTVKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPR 151

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G  G PG  G PG++G  GP G  G  G IG  G  G+ G+ G  G+PG  G  G+PG  
Sbjct: 152 GMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGTPGMDGQKGEPGLPGAAGQSGLPGPK 211

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKS--GINGVPGTPAICAYKRE 270
           G PG +G  G  G NG KG TG +G+ G S  GI G PG       K E
Sbjct: 212 GEPGNEGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGE 260



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 47/91 (51%), Gaps = 10/91 (10%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           GF     E   PGL G  G++GE G  G       RGE+G PG    PGP+G  G+ G R
Sbjct: 277 GFIGPQGEPGLPGLPGTKGERGEAGPPG-------RGERGDPGA---PGPKGKQGESGAR 326

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
           GPKG  G  G +G  G  G RGP G  G PG
Sbjct: 327 GPKGSKGDRGDKGDSGALGPRGPPGQKGDPG 357



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 61/134 (45%), Gaps = 34/134 (25%)

Query: 113 GLQGPIGQKGEIGAKGE--MGVKGERGE---------------------KGAPGVVGP-- 147
           G  GP G  GE G  G    G+KGE GE                     KG PG +GP  
Sbjct: 224 GENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQG 283

Query: 148 -PGPQGIPGDEGK--------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
            PG  G+PG +G+        RG +GD G PGP+G  G+ G RGPKG  G  G  G  G 
Sbjct: 284 EPGLPGLPGTKGERGEAGPPGRGERGDPGAPGPKGKQGESGARGPKGSKGDRGDKGDSGA 343

Query: 199 DGLPGEPGLDGIPG 212
            G  G PG  G PG
Sbjct: 344 LGPRGPPGQKGDPG 357



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 46/94 (48%)

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G DG  G+PG PG  G PG  G+ G  G  G  G  G PGT G +G+KG  G  G  G+
Sbjct: 145 TGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGTPGMDGQKGEPGLPGAAGQ 204

Query: 253 SGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
           SG+ G  G P     K ++    P  +T +   P
Sbjct: 205 SGLPGPKGEPGNEGEKGDAGENGPKGDTGEKGDP 238



 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 46/95 (48%), Gaps = 20/95 (21%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVV-----GPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           IG +GE G  G  G KGERGE G PG       G PGP+G  G+ G RGPKG        
Sbjct: 279 IGPQGEPGLPGLPGTKGERGEAGPPGRGERGDPGAPGPKGKQGESGARGPKGS------- 331

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
                   +G +GD G  G +G  G  G  G+PG 
Sbjct: 332 --------KGDRGDKGDSGALGPRGPPGQKGDPGA 358


>gi|410908795|ref|XP_003967876.1| PREDICTED: collagen alpha-1(XI) chain-like isoform 2 [Takifugu
           rubripes]
          Length = 1729

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/141 (44%), Positives = 79/141 (56%), Gaps = 12/141 (8%)

Query: 129 EMGVKGERGEKGAPGVVGPP------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
           E G +G  G  G PG  GPP      GP G  G +G+ GP+G +GYPGP+G+ G +G RG
Sbjct: 639 EKGPQGRSGLLGLPGADGPPGHPGKEGPAGEKGAQGQSGPQGPIGYPGPRGVKGADGVRG 698

Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            KG     G  G DG  G  G+ GL G  G +GM G  G+D   G +G  G +G NGE G
Sbjct: 699 LKGSK---GEKGEDGFPGFKGDMGLKGDRGESGMLGSRGED---GPEGPKGRSGPNGESG 752

Query: 243 MTGPRGNRGKSGINGVPGTPA 263
             GP G +GK G+ G+PG P 
Sbjct: 753 PIGPAGEKGKLGVPGLPGYPG 773



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/129 (44%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
           RG  G  G+ G  GP G+PG  G +G  GD   PGPQG  G +G  GP G  G  GR G 
Sbjct: 454 RGPSGPMGLTGRSGPVGMPGPAGLKGESGD---PGPQGPRGVQGPLGPPGKSGKRGRPGA 510

Query: 196 DGRDGLPGEPG------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           DG  G+PGE G       DG+PG  G  G  G+ G  G  G  G +G  GE G  GPRG 
Sbjct: 511 DGARGMPGESGSKGDRGFDGLPGLPGEKGHRGEPGPIGPTGAVGEDGQRGEDGEIGPRGL 570

Query: 250 RGKSGINGV 258
            G+SG  G+
Sbjct: 571 PGESGPRGL 579



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 85/179 (47%), Gaps = 18/179 (10%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
              +G    +    P G  GP G KG  G +G  G KGE+GE G PG  G  G +G  G+
Sbjct: 667 AGEKGAQGQSGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGE 726

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            G  G +G+ G  GP+G  G  G+ GP G  G  G++G+    GLPG PG  G  G  G 
Sbjct: 727 SGMLGSRGEDGPEGPKGRSGPNGESGPIGPAGEKGKLGV---PGLPGYPGRQGPKGSRGF 783

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMT---------------GPRGNRGKSGINGVPG 260
            G PG +G  G  G+ G  G  G++G T               GP+G  G  G +G PG
Sbjct: 784 PGFPGANGEKGARGVAGKAGPRGQRGPTGPRGGRGARGPTGKPGPKGTSGSDGPSGPPG 842



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 66/116 (56%), Gaps = 9/116 (7%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRG------PK 163
           G  GP+G  G  G KGE G  G +G +G  G +GPPG    +G PG +G RG       K
Sbjct: 464 GRSGPVGMPGPAGLKGESGDPGPQGPRGVQGPLGPPGKSGKRGRPGADGARGMPGESGSK 523

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
           GD G+ G  G+PG++G RG  G +G  G +G DG+ G  GE G  G+PG +G  G+
Sbjct: 524 GDRGFDGLPGLPGEKGHRGEPGPIGPTGAVGEDGQRGEDGEIGPRGLPGESGPRGL 579



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 85/154 (55%), Gaps = 15/154 (9%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGP---- 162
           GL+G  G+KGE    G KG+MG+KG+RGE G   + G  GP GP+G  G  G+ GP    
Sbjct: 698 GLKGSKGEKGEDGFPGFKGDMGLKGDRGESGMLGSRGEDGPEGPKGRSGPNGESGPIGPA 757

Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
             KG +G PG   +PG  G++GPKG  G+PG  G +G  G  G  G  G  G+ G  G  
Sbjct: 758 GEKGKLGVPG---LPGYPGRQGPKGSRGFPGFPGANGEKGARGVAGKAGPRGQRGPTGPR 814

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
           G  G  G  G PG  GT+G  G +GP G RG  G
Sbjct: 815 GGRGARGPTGKPGPKGTSGSDGPSGPPGERGPQG 848



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 112/295 (37%), Gaps = 108/295 (36%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKG------------EMGVKGERG------- 137
             ++G         P G+QGP+G  G+ G +G            E G KG+RG       
Sbjct: 475 AGLKGESGDPGPQGPRGVQGPLGPPGKSGKRGRPGADGARGMPGESGSKGDRGFDGLPGL 534

Query: 138 --EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG------------- 182
             EKG  G  GP GP G  G++G+RG  G++G   P+G+PG+ G RG             
Sbjct: 535 PGEKGHRGEPGPIGPTGAVGEDGQRGEDGEIG---PRGLPGESGPRGLLGPRGPPGSPGA 591

Query: 183 -----------PKGDM------------------------------------GYPGRIGL 195
                      PKG+M                                    G  G +GL
Sbjct: 592 PGVAGVDGPQGPKGNMGPQGEPGPPGQQGIPGTQGLPGPQGPIGPPGEKGPQGRSGLLGL 651

Query: 196 DGRDGLPGEPGLDGIPGRNGMD---------GIPGKDGLPGKDGIPGTNGTNGEKGM--- 243
            G DG PG PG +G  G  G           G PG  G+ G DG+ G  G+ GEKG    
Sbjct: 652 PGADGPPGHPGKEGPAGEKGAQGQSGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGF 711

Query: 244 ------TGPRGNRGKSGI------NGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
                  G +G+RG+SG+      +G  G         ES  + P  E  +L +P
Sbjct: 712 PGFKGDMGLKGDRGESGMLGSRGEDGPEGPKGRSGPNGESGPIGPAGEKGKLGVP 766



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 72/177 (40%), Gaps = 63/177 (35%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDE 178
            G  G +GE G KGE G +G PG  GP GPQG+    GK GP+G  G PGP   QG+PG  
Sbjct: 1295 GAEGRQGEKGAKGESGTEGPPGKTGPVGPQGL---AGKPGPEGLRGIPGPVGEQGLPGSS 1351

Query: 179  GKR------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
            G+                   G KG+ G+PG IGL G  G  GE G              
Sbjct: 1352 GQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKG-------------- 1397

Query: 221  GKDGLPGKDGIPGTNGTNG------------------------EKGMTGPRGNRGKS 253
               GLPG  G PG  G  G                         KG TGP G +G S
Sbjct: 1398 -DRGLPGPQGTPGNKGDGGVSGAAGPLGPPGPPGLPGPQGPKGAKGSTGPAGAKGDS 1453



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 71/158 (44%), Gaps = 21/158 (13%)

Query: 146 GPPGPQGIPGDEGKRGPKGDM-------GYPGPQG--IPGDEGK------------RGPK 184
           GPPG  G+PG +G  GP G M       G  G +G  +   E +            RGP 
Sbjct: 398 GPPGRAGLPGADGVPGPPGTMLMLPFRFGGDGEKGPVVSAQEAQAQAILSQARLAMRGPS 457

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G MG  GR G  G  G  G  G  G PG  G  G+ G  G PGK G  G  G +G +GM 
Sbjct: 458 GPMGLTGRSGPVGMPGPAGLKGESGDPGPQGPRGVQGPLGPPGKSGKRGRPGADGARGMP 517

Query: 245 GPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQ 282
           G  G++G  G +G+PG P    ++ E   + P     +
Sbjct: 518 GESGSKGDRGFDGLPGLPGEKGHRGEPGPIGPTGAVGE 555



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 55/109 (50%), Gaps = 18/109 (16%)

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---LDGIPGRNGMDGIPGKDG-- 224
            G +G  G++G +G  G  G PG+ G  G  GL G+PG   L GIPG  G  G+PG  G  
Sbjct: 1295 GAEGRQGEKGAKGESGTEGPPGKTGPVGPQGLAGKPGPEGLRGIPGPVGEQGLPGSSGQD 1354

Query: 225  ----------LPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPG 260
                      LPG  G PG+ G  G     G+ GP G +G+ G  G+PG
Sbjct: 1355 GPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPG 1403


>gi|119578370|gb|EAW57966.1| collagen, type II, alpha 1 (primary osteoarthritis,
           spondyloepiphyseal dysplasia, congenital), isoform CRA_a
           [Homo sapiens]
          Length = 1418

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 746 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 805

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 806 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 865

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 866 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 916

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 917 PGQRGERGFPGLPG 930



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 378 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 437

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 438 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 497

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 498 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 557

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 558 GLRGLPG 564



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 732 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 791

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 851

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 852 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 911

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 912 GIVGLPG 918



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 306 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 365

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 366 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 425

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 426 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 482

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 483 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 511



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 619 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 678

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 738

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 739 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 789

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 790 DAGAPGPQGPSGAPG 804



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------------PK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G RG                K
Sbjct: 681 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 734

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 735 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 791

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 834



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 645 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 694

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 695 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 752

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 753 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 807



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 453 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 512

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 513 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 569

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 570 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 629

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 630 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 665



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 81/178 (45%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 858  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 910

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 911  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 968

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG  G  G  GE                   G TG +G+RG++G  G
Sbjct: 969  GSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1026



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 305 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 358

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 359 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 418

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 419 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 478

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 479 PGRPGEPGLPGAR 491



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 618 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 677

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 678 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 737

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 738 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 785



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 614 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 673

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 674 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 733

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 734 KGEVGPPGPAGSAGARGAPG 753



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 215 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 274

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 275 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 334

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 335 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 391

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 392 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 422


>gi|157030|gb|AAA28404.1| alpha-1 type IV collagen [Drosophila melanogaster]
 gi|157078|gb|AAB59184.1| type IV collagen [Drosophila melanogaster]
 gi|157082|gb|AAA28423.1| type IV pro-collagen [Drosophila melanogaster]
          Length = 1775

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 122/273 (44%), Gaps = 64/273 (23%)

Query: 86  VWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---------- 135
              + Y  IP  +++G          PG  G  G KG+ G+ G  G KGE          
Sbjct: 707 AGRDGYPGIPGQSIKGE---------PGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIK 757

Query: 136 ---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG---PKGDMGY 189
              +G KG PG  G PGP G  G  G+RG  G  G  GPQG PG EG RG   P+G+ G 
Sbjct: 758 MPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGN 817

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL--PGKDGIPGTNGTNGEKGMTGPR 247
            G +G+ G    PG+ GL GIPGRNG  G  G+ G+  PG  G PG NG  GEKG  GP 
Sbjct: 818 QGAVGVPGN---PGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPT 874

Query: 248 ---------------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGS 292
                          G+RG +G+ GV G P I   K +   + P    + +  PP + G 
Sbjct: 875 GPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGP----AGVAGPPGVPGI 930

Query: 293 EHIFSSSPIVVREGDNVRLRCVATGHP-KPSII 324
                         D VR R  A G P  P ++
Sbjct: 931 --------------DGVRGRDGAKGEPGSPGLV 949



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 98/180 (54%), Gaps = 16/180 (8%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQ-------KGEIGAKGEMGVKGERGEKGAPGVVGPPG 149
            V +QGF  +       G++G  G        +G+ G++GE G  GE+GE+G  G+ GP G
Sbjct: 1194 VGLQGFTGAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAG 1253

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
              G  GD G +GP G  G     GIPG +G  GP+G++GYPG + + G  GLPG PG +G
Sbjct: 1254 VAGAKGDRGLQGPPGASGL---NGIPGAKGDIGPRGEIGYPG-VTIKGEKGLPGRPGRNG 1309

Query: 210  IPGRNGMDGIPGKDGLPGKD-----GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
              G  G  G+ G+ GLPG       G+PG  G  G KG  G  G+ G+ G +G PG P +
Sbjct: 1310 RQGLIGAPGLIGERGLPGLPESRLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGL 1369



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 93/176 (52%), Gaps = 24/176 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
           PG +G  G+ G  G KG+MG+KG+ G K +    GP G +G      IPG +G RGP G+
Sbjct: 542 PGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGE 601

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------------GLDGI 210
            GYPG +G  G  G+ GP G+ G  GR GL G  G PG+P               G  G 
Sbjct: 602 RGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGA 661

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR---GKSGINGVPGTPA 263
           PG  G+ G  G +GLPG  G  G  G  GEKG++G  GN    G++G +G PG P 
Sbjct: 662 PGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPG 717



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 86/164 (52%), Gaps = 24/164 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGD 165
            PG  GP G KGE G  G  G  G+ G  GAPG+ G  GPQG  G+      EG++G KGD
Sbjct: 1337 PGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGD 1396

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G  GP G+PG  G+   KGD GYPG  G DG  G PGE G  G  GR+G DG P   GL
Sbjct: 1397 RGLQGPSGLPGLVGQ---KGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTP---GL 1450

Query: 226  PGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGING 257
            PG+ G PG              G NG KG  G  G RG  GI G
Sbjct: 1451 PGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQG 1494



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 91/179 (50%), Gaps = 25/179 (13%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPG---- 170
             G+KGE G +G  G  G  G KG  G+ GPPG  G   IPG +G  GP+G++GYPG    
Sbjct: 1237 TGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIK 1296

Query: 171  -PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP-----------------GEPGLDGIPG 212
              +G+PG  G+ G +G +G PG IG  G  GLP                 GE GL G PG
Sbjct: 1297 GEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLPESRLVGLPGPIGPAGSKGERGLAGSPG 1356

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
            + G DG PG  GL G  G  G  G  G  G  G +G++G  G+ G  G P +   K ++
Sbjct: 1357 QPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDT 1415



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 87/166 (52%), Gaps = 24/166 (14%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++G  G KGE G+ G +G+ G +G++GAPG  GP G  G+ G  GKRGP    G PG  
Sbjct: 932  GVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGP---AGIPGVS 988

Query: 173  GIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G  GD+G  G  G+               MG  G  GL G    PG+ GLDG+PG  G  
Sbjct: 989  GAKGDKGASGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAG---APGQQGLDGMPGEKGNQ 1045

Query: 218  GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G PG DG P   G+PG     G+KG  GP G RG +G  G PG P 
Sbjct: 1046 GFPGLDGPP---GLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPG 1088



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 81/148 (54%), Gaps = 12/148 (8%)

Query: 111  PPGLQGPIGQKGE---------IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            PPGL G  G+KG+          GA G +G  G+RG+ G PGV G PG  G  GD G  G
Sbjct: 858  PPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIG 917

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            P G  G PG  GI G  G+ G KG+ G PG +G+ G  G  G PG DG  G  G+ G PG
Sbjct: 918  PAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPG 977

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            K    G  GIPG +G  G+KG +G  GN
Sbjct: 978  KR---GPAGIPGVSGAKGDKGASGLTGN 1002



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 95/190 (50%), Gaps = 40/190 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           G+ GP G  G++G+KGE G          KGE+GE G  G  G  GPQG PG++G+RG  
Sbjct: 182 GMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDS 241

Query: 164 GDMGYPGPQGIPGDEGKRGPK--GDMGYPGRIGLDGRDGLP------------------- 202
           G  G  GP+G  G +G++G    G M  PG  G+ G  G P                   
Sbjct: 242 GPYGAKGPRGEHGLKGEKGASCYGPM-KPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDM 300

Query: 203 ---GEPGL---DGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
              GEPGL    G PG     G+DG  G+ GLPG  G  G  G  G  G TG +G+RG+ 
Sbjct: 301 GQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEP 360

Query: 254 GINGVPGTPA 263
           G+NG+PG P 
Sbjct: 361 GLNGLPGNPG 370



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 104/234 (44%), Gaps = 65/234 (27%)

Query: 93  RIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM------------GVKGERGEKG 140
           ++P    +G    T    PPG  G  G++G  G KG              G+ G RGEKG
Sbjct: 757 KMPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKG 816

Query: 141 APGVVGPPGP------QGIPGDEGKRGPKGD--------MGYPGPQGIPGDEGKRGPKGD 186
             G VG PG       +GIPG  G+ GP+G+        MG PG  G+ G++G RGP G 
Sbjct: 817 NQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGP 876

Query: 187 MGYPGR---------------IGLDGRDGL------------------PGEPGLDGIPGR 213
           +G+PG                 G+ GR G+                  PG PG+DG+ GR
Sbjct: 877 IGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGR 936

Query: 214 NGMDGIPGKDGL------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           +G  G PG  GL       G  G PG +G  G  G+TG  G RG +GI GV G 
Sbjct: 937 DGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGA 990



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 82/169 (48%), Gaps = 30/169 (17%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPKGDMGYPGPQGIP 175
           G  G  G  G  G++G+ G PG  G  G  GI GD G +      GPKGD G  G  GIP
Sbjct: 531 GRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIP 590

Query: 176 GDEGKRGPKGDMGYPGRIGLD---GRDGLPGEPGLDGIPGRNGMDGIPGK---------- 222
           G +G RGP G+ GYPG  G D   G+ G PGE G DG  G  G  G PGK          
Sbjct: 591 GKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIE 650

Query: 223 --------DGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
                    G PG  G+ G  G  G  G+ GP+G    +G+ G++G PG
Sbjct: 651 PLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPG 699



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 88/188 (46%), Gaps = 13/188 (6%)

Query: 112 PGLQGPIG---QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
           PG++GP G   QKG+ G  G+ G KGERG  G  G  G PG QG  G+ G  G  G  G 
Sbjct: 109 PGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGC 168

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G  GIPG EG  G  G  GY G++G  G  G P +   D   G  G  G  G  GL G 
Sbjct: 169 DGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGP 228

Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGING----------VPGTPAICAYKRESCSLLPNS 278
            G PG  G  G+ G  G +G RG+ G+ G           PG P I   K E  S  P  
Sbjct: 229 QGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVK 288

Query: 279 ETSQLLIP 286
            T  ++ P
Sbjct: 289 PTHTVMGP 296



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 87/178 (48%), Gaps = 9/178 (5%)

Query: 95  PLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
           PL   +G+  +       G +G  G  G  G KGE G KGE+G  GAPG  G PG  G  
Sbjct: 651 PLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRD 710

Query: 155 GDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD-------GRDGLPGEP 205
           G  G  G   KG+ G+ G  G  GD+G  G  G+ G PG   LD       G  G PG+ 
Sbjct: 711 GYPGIPGQSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQT 770

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G+ G PG +G  G  G  GL G  G  G  G  G +G+ GPRG +G  G  GVPG P 
Sbjct: 771 GMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPG 828



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 95/168 (56%), Gaps = 20/168 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------PQGIPGDEGKRG-- 161
            G++G  G  G  G +G  G+ GE+G +G PG+ GPPG          +G PG  G RG  
Sbjct: 1019 GIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDT 1078

Query: 162  -PKGDMGYPGPQGIPG--DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------PG 212
             P G  G+PG +G+PG    G+ GP G+ G  GR G+DGRDG+ GE G  G+      PG
Sbjct: 1079 GPAGTPGWPGEKGLPGLAVHGRAGPPGEKGDQGRSGIDGRDGINGEKGEQGLQGVWGQPG 1138

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G PG  G PG DG+PG  G  G  G  G RG++G+ G++G+PG
Sbjct: 1139 EKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGLSGLPG 1186



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 93/196 (47%), Gaps = 18/196 (9%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            GF  +      PG +G  G  G  G  G +G KG+ G  G  GV GPPG  GI G  G+ 
Sbjct: 878  GFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRD 937

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G KG+ G PG  G+PG++G RG  G+    G+ G  G  G+ G  G PG+ G  G  G  
Sbjct: 938  GAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGAS 997

Query: 218  GIPGKD---------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            G+ G D               G+ G  G+ G  G  G  GM G +GN+G  G++G PG P
Sbjct: 998  GLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLP 1057

Query: 263  AICAYKRESCSLLPNS 278
               + K +     P+ 
Sbjct: 1058 GDASEKGQKGEPGPSG 1073



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 94/199 (47%), Gaps = 44/199 (22%)

Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVG------PPGPQGIPGDE----- 157
           PG +G +G KG++G K      G KG++G  G PG+ G      PPG +G PG+      
Sbjct: 554 PGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGI 613

Query: 158 -GKRGPKGDMGYPGPQGIPGDEGKRGP------------KGDMGYPGRIGLDGRDGLPGE 204
            G+ GP G+ G  G  G+PG  G+ G             KGD GYPG  G  G  G  G 
Sbjct: 614 NGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGA 673

Query: 205 PGLDGIP---------GRNGMDGIPGKDGLP---GKDGIPGTNGTN-----GEKGMTGPR 247
            GL GIP         G  G+ G PG DG P   G+DG PG  G +     G  G  G +
Sbjct: 674 EGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAK 733

Query: 248 GNRGKSGINGVPGTPAICA 266
           G++G  G +G  G P  CA
Sbjct: 734 GDKGSFGRSGEKGEPGSCA 752



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 81/165 (49%), Gaps = 37/165 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL   +G+KGE G +G+ G+ G++GEKG PG  G  G QG  G  G  G KGD G PG 
Sbjct: 306 PGL---VGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGL 362

Query: 172 QGIPGDEGKRGPKGD----------------------------------MGYPGRIGLDG 197
            G+PG+ G++G  G                                   +G PG  GL+G
Sbjct: 363 NGLPGNPGQKGEPGRAGATGEPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPGPQGLNG 422

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            DGLPG  G +G     G+ G PG +G PGK G  GT G NG KG
Sbjct: 423 VDGLPGPQGYNGQKDGAGLPGRPGNEGPPGKKGEKGTAGLNGPKG 467



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 12/119 (10%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGE 204
           +G+PG  G  G KG+MG+PG +G  GD+G++      G +GD G  G  GL G+ G+   
Sbjct: 91  RGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGV--- 147

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG+ G  G  G  GI GKDG  G+DGIPG  G +   GM GPRG  G+ G  G  G PA
Sbjct: 148 PGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLS---GMPGPRGYAGQLGSKGEKGEPA 203



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 77/173 (44%), Gaps = 34/173 (19%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           MG +G+ G+KG PG+VG  G  G  GD G  G KG+ G PG  G  G +G  GP G  G 
Sbjct: 294 MGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQ 353

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMD-------------------------------G 218
            G  G  G +GLPG PG  G PGR G                                 G
Sbjct: 354 KGDRGEPGLNGLPGNPGQKGEPGRAGATGEPGLLGPPGPPGGGRGTPGPPGPKGPRGYVG 413

Query: 219 IPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAICAYK 268
            PG  GL G DG+PG  G NG+K   G+ G  GN G  G  G  GT  +   K
Sbjct: 414 APGPQGLNGVDGLPGPQGYNGQKDGAGLPGRPGNEGPPGKKGEKGTAGLNGPK 466



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 94/196 (47%), Gaps = 38/196 (19%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGPPG 149
           + G C+S    C  G +G  G  G  G  G+ G +G  GE+G P         G  GPPG
Sbjct: 566 VGGKCSS----CRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPG 621

Query: 150 PQ------GIPGDEGKRGP------------KGDMGYPGPQGIPGDEGKRGPKGDMGYP- 190
            +      G+PG  G+ G             KGD GYPG  G  G +G +G +G  G P 
Sbjct: 622 EKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPG 681

Query: 191 --GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G  G  G  GL G PG DG PGR G DG P   G+PG+  I G  G +G  G  G +G
Sbjct: 682 PKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYP---GIPGQS-IKGEPGFHGRDGAKGDKG 737

Query: 249 NRGKSGINGVPGTPAI 264
           + G+SG  G PG+ A+
Sbjct: 738 SFGRSGEKGEPGSCAL 753



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 92/189 (48%), Gaps = 35/189 (18%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------PPGPQGIPGDEG 158
            P G  G  G  G+ G  G  GV G +G+KGA G+ G             PG  GI GD+G
Sbjct: 966  PKGFAGVTGAPGKRGPAGIPGVSGAKGDKGASGLTGNDGPVGGRGPPGAPGLMGIKGDQG 1025

Query: 159  KRGP------------KGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
              G             KG+ G+P   GP G+PGD  ++G KG+ G  G  G  G  G PG
Sbjct: 1026 LAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPG 1085

Query: 204  EPGLDGIPGR--NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR------GNRGKSGI 255
             PG  G+PG   +G  G PG+ G  G+ GI G +G NGEKG  G +      G +G  G 
Sbjct: 1086 WPGEKGLPGLAVHGRAGPPGEKGDQGRSGIDGRDGINGEKGEQGLQGVWGQPGEKGSVGA 1145

Query: 256  NGVPGTPAI 264
             G+PG P +
Sbjct: 1146 PGIPGAPGM 1154



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 87/180 (48%), Gaps = 31/180 (17%)

Query: 113  GLQGPIGQKGEIGAK---GEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKR--- 160
            G  GP G+KG+ G     G  G+ GE+GE+G  GV G PG +      GIPG  G     
Sbjct: 1099 GRAGPPGEKGDQGRSGIDGRDGINGEKGEQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLP 1158

Query: 161  ------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                        G +GD G PG  G+PG +G+ GP G  G+ G  G  G  G+ G+PGL 
Sbjct: 1159 GAAGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGIRGQPGLP 1218

Query: 209  -------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                   G  G  G  G  G+ G  G+ G+ G  G  G KG  G +G  G SG+NG+PG 
Sbjct: 1219 ATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGA 1278



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 73/186 (39%), Gaps = 54/186 (29%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + GF     +    GLQGP G  G +G KG+ G          PG+ G  GP G PG+ 
Sbjct: 1383 GLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGY---------PGLNGNDGPVGAPGER 1433

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG----- 212
            G  GPK                              G DGRDG PG PG  G PG     
Sbjct: 1434 GFTGPK------------------------------GRDGRDGTPGLPGQKGEPGMLPPP 1463

Query: 213  ----------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                      RNG  G PG+ G  G  GI G  G  GE+G+ G  GN G+ G  G  G P
Sbjct: 1464 GPKGEPGQPGRNGPKGEPGRPGERGLIGIQGELGEKGERGLIGETGNVGRPGPKGDRGEP 1523

Query: 263  AICAYK 268
                Y+
Sbjct: 1524 GERGYE 1529



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 94/247 (38%), Gaps = 95/247 (38%)

Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------------ 144
           + PPG  G  G +GE G  G  G  G++GE G  G                         
Sbjct: 345 FGPPGSTGQKGDRGEPGLNGLPGNPGQKGEPGRAGATGEPGLLGPPGPPGGGRGTPGPPG 404

Query: 145 -------VGPPGPQGIPGDEGKRGPKG-----DM----GYPGPQGIPGDEGKRG------ 182
                  VG PGPQG+ G +G  GP+G     D     G PG +G PG +G++G      
Sbjct: 405 PKGPRGYVGAPGPQGLNGVDGLPGPQGYNGQKDGAGLPGRPGNEGPPGKKGEKGTAGLNG 464

Query: 183 ------------------PKGDMGYPGR--IGLDGRDGLPGEPGLDGIPGRNGMD----- 217
                              KGD G PG    G  G  G+PG PGL G  G  G       
Sbjct: 465 PKGSIGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGA 524

Query: 218 ---------GIPGKDGLPGKDGIPGTNGTNGEKG---------------MTGPRGNRGKS 253
                    G PG  G PG+ G  G  GT G+KG                 GP+G++G S
Sbjct: 525 PGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTS 584

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 585 GLPGIPG 591


>gi|410900021|ref|XP_003963495.1| PREDICTED: collagen alpha-1(II) chain-like isoform 3 [Takifugu
           rubripes]
          Length = 1457

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 87/168 (51%), Gaps = 15/168 (8%)

Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPKG 164
           E  P G  GP+G +G  G  GE G +G RGE GA G +GPPG +G PG+    G+ G  G
Sbjct: 436 ETGPKGELGPLGPQGAPGPAGEEGKRGARGEPGAAGPIGPPGERGAPGNRGFPGQDGLAG 495

Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG------ 218
             G PG +G+PG  G +G  GD G PG  GL G  GL G PG  G  G+ G  G      
Sbjct: 496 GKGAPGDRGVPGAAGPKGTGGDPGRPGESGLPGARGLTGRPGDAGPQGKVGASGPAGDDG 555

Query: 219 ------IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
                   G  G PG  G PG  G NGE G  G +G  G+ G+ G+PG
Sbjct: 556 RPGPPGPLGARGQPGVMGFPGPKGANGEPGKPGEKGLLGRQGLRGLPG 603



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/142 (46%), Positives = 83/142 (58%), Gaps = 12/142 (8%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPKGDMGYPGPQ 172
           G +G KG+ G  G  G+KGE G KG    +GP GPQG P   G+EGKRG +G+ G  GP 
Sbjct: 417 GSLGPKGQSGDPGLPGLKGETGPKG---ELGPLGPQGAPGPAGEEGKRGARGEPGAAGPI 473

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G PG+   RG  G+ G+PG+ GL G  G PG+ G+ G  G  G  G PG+   PG+ G+P
Sbjct: 474 GPPGE---RGAPGNRGFPGQDGLAGGKGAPGDRGVPGAAGPKGTGGDPGR---PGESGLP 527

Query: 233 GTNGTNGEKGMTGPRGNRGKSG 254
           G  G  G  G  GP+G  G SG
Sbjct: 528 GARGLTGRPGDAGPQGKVGASG 549



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 86/177 (48%), Gaps = 36/177 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMG 167
           P G  GP G  G+ G KGE+G  G++G+ G+PG  GP   PGP G  G  G +G +G  G
Sbjct: 802 PAGFAGPPGADGQPGVKGELGESGQKGDSGSPGPQGPSGAPGPVGPTGVSGPKGARGAQG 861

Query: 168 YPGPQGIPGDEGK------------------------RGPKGDMGYPGRIGLDGRDGLPG 203
            PG  G PG  G+                        +G +GD G PGR          G
Sbjct: 862 APGSTGFPGSAGRVGPPGPNGNPGAAGPAGPAGKDGPKGTRGDAGPPGRH---------G 912

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           + GL G PG+ G  G PG+DG PG +G  G  G  G +G+ G  G RG+ G  G+PG
Sbjct: 913 DAGLRGPPGQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGIVGLPGQRGERGFPGLPG 969



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 88/185 (47%), Gaps = 39/185 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKR-------- 160
           PG +G  G  G  GA+G+ G +GE G  G+PG  G    PG  GIPG +G          
Sbjct: 341 PGAKGEAGPTGNRGAEGQQGPRGEAGTPGSPGPAGASGNPGTDGIPGAKGSTGGPGIAGA 400

Query: 161 -------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMG------YPGRIGL 195
                              GPKG  G PG   +PG +G+ GPKG++G       PG  G 
Sbjct: 401 PGFPGPRGPPGPQGATGSLGPKGQSGDPG---LPGLKGETGPKGELGPLGPQGAPGPAGE 457

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +G+ G  GEPG  G  G  G  G PG  G PG+DG+ G  G  G++G+ G  G +G  G 
Sbjct: 458 EGKRGARGEPGAAGPIGPPGERGAPGNRGFPGQDGLAGGKGAPGDRGVPGAAGPKGTGGD 517

Query: 256 NGVPG 260
            G PG
Sbjct: 518 PGRPG 522



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 86/191 (45%), Gaps = 36/191 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------------ 147
           PG  GP G  G+ G  GE G+ G RG  G PG  GP                        
Sbjct: 506 PGAAGPKGTGGDPGRPGESGLPGARGLTGRPGDAGPQGKVGASGPAGDDGRPGPPGPLGA 565

Query: 148 ---------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                    PGP+G  G+ GK G KG +G  G +G+PG +G+ G  G  G  G +G  G 
Sbjct: 566 RGQPGVMGFPGPKGANGEPGKPGEKGLLGRQGLRGLPGKDGETGSAGPPGPAGPVGERGE 625

Query: 199 DGLPGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
            G PG  G  G+PG +G     G PG  GLPG+ G+PG  G  GE+G  G RG  G  G+
Sbjct: 626 QGQPGPSGFQGLPGPSGSPGEAGKPGDQGLPGEGGVPGAAGPRGERGFPGERGGAGPQGL 685

Query: 256 NGVPGTPAICA 266
            G  G P    
Sbjct: 686 QGPRGLPGTAG 696



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 79/166 (47%), Gaps = 24/166 (14%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG--------- 161
           PPGLQG  G++G  G  G  G +G+ GEK         GP+G PG +G RG         
Sbjct: 715 PPGLQGMPGERGAGGIPGAKGDRGDLGEK---------GPEGAPGKDGSRGLTGPIGPPG 765

Query: 162 ------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
                  KG+ G  GP G PG  G  G +G++G PG  G  G  G  G+PG+ G  G +G
Sbjct: 766 PSGPNGAKGESGPVGPNGAPGSRGTPGDRGEIGPPGPAGFAGPPGADGQPGVKGELGESG 825

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G  G  G  G PG  G  G  G  G RG +G  G  G PG+
Sbjct: 826 QKGDSGSPGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGSTGFPGS 871



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 92/208 (44%), Gaps = 57/208 (27%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMGYPGPQGI 174
           +G++GE G  G  G +G  G  G+PG  G PG QG+PG+    G  GP+G+ G+PG +G 
Sbjct: 620 VGERGEQGQPGPSGFQGLPGPSGSPGEAGKPGDQGLPGEGGVPGAAGPRGERGFPGERGG 679

Query: 175 PGDEGKRGPKGDMGYPGRIGLDG---------RDGLPGEPGLDGIPGRNGMDGIPGK--- 222
            G +G +GP+   G PG  G DG           G  G PGL G+PG  G  GIPG    
Sbjct: 680 AGPQGLQGPR---GLPGTAGSDGPKGAIGPAGAAGPQGPPGLQGMPGERGAGGIPGAKGD 736

Query: 223 ---------DGLPGKD------------------------------GIPGTNGTNGEKGM 243
                    +G PGKD                              G PG+ GT G++G 
Sbjct: 737 RGDLGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGAKGESGPVGPNGAPGSRGTPGDRGE 796

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRES 271
            GP G  G +G  G  G P +     ES
Sbjct: 797 IGPPGPAGFAGPPGADGQPGVKGELGES 824



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 84/182 (46%), Gaps = 39/182 (21%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVG------------------PPGPQGI 153
           PG  GP G++G  G +G  G +G +G +G PG  G                  PPG QG+
Sbjct: 662 PGAAGPRGERGFPGERGGAGPQGLQGPRGLPGTAGSDGPKGAIGPAGAAGPQGPPGLQGM 721

Query: 154 PGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGR 192
           PG+ G       +G +GD+G  GP+G PG +G RG                KG+ G  G 
Sbjct: 722 PGERGAGGIPGAKGDRGDLGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGAKGESGPVGP 781

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
            G  G  G PG+ G  G PG  G  G PG DG PG  G  G +G  G+ G  GP+G  G 
Sbjct: 782 NGAPGSRGTPGDRGEIGPPGPAGFAGPPGADGQPGVKGELGESGQKGDSGSPGPQGPSGA 841

Query: 253 SG 254
            G
Sbjct: 842 PG 843



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 74/149 (49%), Gaps = 15/149 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------IPGD 156
           PG QGP G  G +G  G  G KG RG +GAPG  G PG  G                 G 
Sbjct: 833 PGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGSTGFPGSAGRVGPPGPNGNPGAAGPAGP 892

Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            GK GPKG  G  GP G  GD G RGP G  G  G  G DG  G  G  G  G+ G  G+
Sbjct: 893 AGKDGPKGTRGDAGPPGRHGDAGLRGPPGQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGI 952

Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G+PG+ G  G  G+PG +G  G++G +G
Sbjct: 953 VGLPGQRGERGFPGLPGPSGEPGKQGASG 981



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 83/185 (44%), Gaps = 39/185 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---------GIPGDEGKRGPK 163
           G  GP G  GE G  GE G+ G +G +G PG  G  G           G  G++G+ GP 
Sbjct: 573 GFPGPKGANGEPGKPGEKGLLGRQGLRGLPGKDGETGSAGPPGPAGPVGERGEQGQPGPS 632

Query: 164 GDMGYPGPQGIPGDEGK---------------RGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  G PGP G PG+ GK                GP+G+ G+PG  G  G  GL G  GL 
Sbjct: 633 GFQGLPGPSGSPGEAGKPGDQGLPGEGGVPGAAGPRGERGFPGERGGAGPQGLQGPRGLP 692

Query: 209 GIPGRNG------------MDGIPGKDGLPGK---DGIPGTNGTNGEKGMTGPRGNRGKS 253
           G  G +G              G PG  G+PG+    GIPG  G  G+ G  GP G  GK 
Sbjct: 693 GTAGSDGPKGAIGPAGAAGPQGPPGLQGMPGERGAGGIPGAKGDRGDLGEKGPEGAPGKD 752

Query: 254 GINGV 258
           G  G+
Sbjct: 753 GSRGL 757



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 87/208 (41%), Gaps = 60/208 (28%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGE---------RGEKGAPGVVGPPGPQGI------PGDE 157
           GL GP G  GE G  G+ G+ GE         RGE+G PG  G  GPQG+      PG  
Sbjct: 636 GLPGPSGSPGEAGKPGDQGLPGEGGVPGAAGPRGERGFPGERGGAGPQGLQGPRGLPGTA 695

Query: 158 GKRGPK---------GDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLP 202
           G  GPK         G  G PG QG+PG+       G +G +GD+G  G  G  G+DG  
Sbjct: 696 GSDGPKGAIGPAGAAGPQGPPGLQGMPGERGAGGIPGAKGDRGDLGEKGPEGAPGKDGSR 755

Query: 203 ---------------------------GEPGLDGIPGRNGMDGIPGKDGL---PGKDGIP 232
                                      G PG  G PG  G  G PG  G    PG DG P
Sbjct: 756 GLTGPIGPPGPSGPNGAKGESGPVGPNGAPGSRGTPGDRGEIGPPGPAGFAGPPGADGQP 815

Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
           G  G  GE G  G  G+ G  G +G PG
Sbjct: 816 GVKGELGESGQKGDSGSPGPQGPSGAPG 843



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 64/151 (42%), Gaps = 39/151 (25%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
            GP G +G+ G  G  G  G RG  G  G  G PG  G PG EG  GP+G  G  G  G+P
Sbjct: 897  GPKGTRGDAGPPGRHGDAGLRGPPGQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGIVGLP 956

Query: 176  GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------- 219
            G  G+R                  G PG PG  G PG+ G  G                 
Sbjct: 957  GQRGER------------------GFPGLPGPSGEPGKQGASGSAGDRGPPGPVGPPGLT 998

Query: 220  -----PGKDGLPGKDGIPGTNGTNGEKGMTG 245
                 PG++G PG DG PG +G +G KG  G
Sbjct: 999  GPAGDPGREGAPGSDGPPGRDGASGVKGERG 1029



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 81/198 (40%), Gaps = 51/198 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------GPQGIPGDE------G 158
            P G +G  G  G  G  G  G  G++GEKG PG  GPP      GPQG+ G        G
Sbjct: 898  PKGTRGDAGPPGRHGDAGLRGPPGQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGIVGLPG 957

Query: 159  KRGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDGLPG 203
            +RG +G  G PGP G PG +G  G                 G  G PGR G  G DG PG
Sbjct: 958  QRGERGFPGLPGPSGEPGKQGASGSAGDRGPPGPVGPPGLTGPAGDPGREGAPGSDGPPG 1017

Query: 204  EPGLDGIPGRN------------------------GMDGIPGKDGLPGKDGIPGTNGTNG 239
              G  G+ G                          G  G  G+ G  G  G PG  G  G
Sbjct: 1018 RDGASGVKGERGNSGPAGAPGAPGAPGAPGSVGPLGKQGDRGEAGAQGPAGPPGLAGARG 1077

Query: 240  EKGMTGPRGNRGKSGING 257
              G  GPRG++G++G  G
Sbjct: 1078 MAGPQGPRGDKGEAGEAG 1095



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 80/216 (37%), Gaps = 75/216 (34%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR----------- 160
           PGL G  G+ G  GAKGE G  GE G        GP GP+G+PG+ G+            
Sbjct: 263 PGLDGAKGESGAAGAKGETGSAGENG------APGPMGPRGLPGERGRPGAAGAAGARGN 316

Query: 161 ----------------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR 198
                                 G  G  G  GP G  G EG++GP+G+ G PG  G  G 
Sbjct: 317 DGLPGPAGPPGPVGPAGAPGFPGSPGAKGEAGPTGNRGAEGQQGPRGEAGTPGSPGPAGA 376

Query: 199 DGLPGEPGLDGIPGR---------------------------------NGMDGIPGKDGL 225
               G PG DGIPG                                   G  G PG  GL
Sbjct: 377 S---GNPGTDGIPGAKGSTGGPGIAGAPGFPGPRGPPGPQGATGSLGPKGQSGDPGLPGL 433

Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G+ G  G  G  G +G  GP G  GK G  G PG 
Sbjct: 434 KGETGPKGELGPLGPQGAPGPAGEEGKRGARGEPGA 469



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 82/196 (41%), Gaps = 48/196 (24%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
              QG      E  PPG +GP G +G  G++G +G+ G+RGE+G PG+   PGP G PG +
Sbjct: 921  GQQGEKGEPGEDGPPGSEGPSGPQGLGGSRGIVGLPGQRGERGFPGL---PGPSGEPGKQ 977

Query: 158  GKRGPK---------------------GDMGYPGPQGIPGDEGKRGPKGDMG-------- 188
            G  G                       G  G PG  G PG +G  G KG+ G        
Sbjct: 978  GASGSAGDRGPPGPVGPPGLTGPAGDPGREGAPGSDGPPGRDGASGVKGERGNSGPAGAP 1037

Query: 189  -------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
                    PG +G  G+ G  GE          G  G  G  GL G  G+ G  G  G+K
Sbjct: 1038 GAPGAPGAPGSVGPLGKQGDRGE---------AGAQGPAGPPGLAGARGMAGPQGPRGDK 1088

Query: 242  GMTGPRGNRGKSGING 257
            G  G  G RG+ G  G
Sbjct: 1089 GEAGEAGERGQKGHRG 1104



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 56/104 (53%), Gaps = 3/104 (2%)

Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---GPKGDMGYPGRIGL 195
           +GAPG  G PGP G  G  G  GP G  G  G  G PG  G+R   GP+G  G+PG  GL
Sbjct: 194 QGAPGEAGEPGPAGPMGPRGPAGPPGKAGSDGEAGKPGKAGERGPAGPQGARGFPGTPGL 253

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
            G  G  G PGLDG  G +G  G  G+ G  G++G PG  G  G
Sbjct: 254 PGIKGHRGHPGLDGAKGESGAAGAKGETGSAGENGAPGPMGPRG 297


>gi|410958894|ref|XP_003986048.1| PREDICTED: collagen alpha-2(XI) chain isoform 2 [Felis catus]
          Length = 1736

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 89/197 (45%), Gaps = 51/197 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE G +G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 660 PGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 719

Query: 172 QGIPG------------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGE--- 204
           +G+ G                        D G +G +G++G PG  G DG +G  G    
Sbjct: 720 RGVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGP 779

Query: 205 ------------------PGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGE 240
                             PGL G PGR       G  G PG  G  G  G+ G +G  GE
Sbjct: 780 TGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGE 839

Query: 241 KGMTGPRGNRGKSGING 257
           +G TGPRG RG  G  G
Sbjct: 840 RGPTGPRGQRGPRGATG 856



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 95/204 (46%), Gaps = 54/204 (26%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRG 161
           PPG  G  G+ G  GA+G   E GVKG+RG  G PG+ G  G       QG+PG  G+ G
Sbjct: 530 PPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG 589

Query: 162 PKGDMGYPGPQGIPGDEGKRG------------------------PKGDM---------- 187
            +GD G  GP+G+PG+ G RG                        PKG +          
Sbjct: 590 ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPG 649

Query: 188 --------GYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   G PG    IG  G  G  G+PGL G+PG +G  G PGK+G PG  G  G +G
Sbjct: 650 QQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 709

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GPRG +G  GI G+ G
Sbjct: 710 PQGPLGYPGPRGVKGVDGIRGLKG 733



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 88/191 (46%), Gaps = 51/191 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------- 161
           PGL G  G +G+ GA+G  G  GE GE+G  G +GP   +G+PG+ G RG          
Sbjct: 564 PGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGP---RGLPGESGPRGLLGPKGPPGI 620

Query: 162 --------------PKGDM------------------GYPGPQGIPGDEGKRGPKGDMGY 189
                         PKG +                  G PGPQG  G  G++GP+G  G 
Sbjct: 621 PGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGL 680

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG   + G DG PG PG +G PG  G  G  G     G  G PG  G  G  G+ G +G+
Sbjct: 681 PG---MPGSDGPPGHPGKEGPPGTKGNQGPSGPQ---GPLGYPGPRGVKGVDGIRGLKGH 734

Query: 250 RGKSGINGVPG 260
           +G+ G +G PG
Sbjct: 735 KGEKGEDGFPG 745



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 76/165 (46%), Gaps = 30/165 (18%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KG+RGE G PG  G PGP G      + GP G +G  GP G PG EG++G KG  G P
Sbjct: 1288 GAKGDRGEDGEPGQPGSPGPTG------ENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDP 1341

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--------------------- 229
            G +G  G+ G  G  G  G PG +G+ G+PG  G  G+                      
Sbjct: 1342 GAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGAPGQAGPPGPVGPPGLPGLR 1401

Query: 230  ---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               G  G  G  G  G+ GP G +G+ G  G+PG       K E+
Sbjct: 1402 GDVGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGQKGET 1446



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 88/197 (44%), Gaps = 54/197 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+GQ G  G KGE G  G +G +G  G+ GPPG             +G+PG+ G  
Sbjct: 496 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGV- 554

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----- 215
             KGD G+ G  G+PG++G RG  G  G PG  G DG  G  GE G  G+PG +G     
Sbjct: 555 --KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLL 612

Query: 216 ----------------MDGIPGKDG---------------LPGKDGIPGTNGTNGEKGMT 244
                           MDG  G  G                PG  G+PG  G  G  G  
Sbjct: 613 GPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEK 672

Query: 245 GPRGNRGKSGINGVPGT 261
           GP   RGK G+ G+PG+
Sbjct: 673 GP---RGKPGLPGMPGS 686



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 87/201 (43%), Gaps = 64/201 (31%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------------------- 159
           G  G +G  G  G+ GE+G PG  G PG  G PG  G                       
Sbjct: 411 GPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQ 470

Query: 160 ---------------RGPKGDMGY---PGPQGIPGD------------EGKRGPKGDMGY 189
                          RGP G MGY   PGP G PG             +G RGP+G  G 
Sbjct: 471 EAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP 530

Query: 190 P------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGE 240
           P      GR G DG  G+PGEPG+ G  G +G+ G+PG+ G     G  G+PG  G +GE
Sbjct: 531 PGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGE 590

Query: 241 K---GMTGPRGNRGKSGINGV 258
           +   G  GPRG  G+SG  G+
Sbjct: 591 RGDDGEIGPRGLPGESGPRGL 611



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 71/157 (45%), Gaps = 30/157 (19%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G +GE G  G+ G  G  GE G PG +G  GP G PG EG++G KG  G PG  G PG  
Sbjct: 1291 GDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKT 1350

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------------------------D 208
            G  GP G  G PG  GL G  G  G+ G                                
Sbjct: 1351 GPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGAPGQAGPPGPVGPPGLPGLRGDVGAKGEK 1410

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G PG  G+ G PG+ G  G  G+PG  G+ G+KG TG
Sbjct: 1411 GHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGQKGETG 1447



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 96/230 (41%), Gaps = 57/230 (24%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G         P G QG  G  G+ G +G  G  G RG  G PGV G  G  G+PG  
Sbjct: 508 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLP 567

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIG-------------------- 194
           G++G +GD G  G  G PG++G+RG  G++   G PG  G                    
Sbjct: 568 GEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVR 627

Query: 195 -LDGRDGLPGE---------------PGLDGIP---------------GRNGMDGIPGKD 223
            +DG  G  G                PG  G+P               G+ G+ G+PG D
Sbjct: 628 GMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSD 687

Query: 224 GL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G    PGK+G PGT G  G  G  GP G  G  G+ GV G   +  +K E
Sbjct: 688 GPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 737



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 70/155 (45%), Gaps = 39/155 (25%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G    T E  PPG   P+G++G  G  G  G +GE+G KG PG VG       PG  G  
Sbjct: 1303 GSPGPTGENGPPG---PLGKRGPAGTPGPEGRQGEKGAKGDPGAVG------APGKTGPV 1353

Query: 161  GPKGDMGYPGP---QGIPGDEGKRG---------------------------PKGDMGYP 190
            GP G  G PGP   +G+PG  G++G                            KG+ G+P
Sbjct: 1354 GPAGPAGKPGPDGLRGLPGSVGQQGRPGAPGQAGPPGPVGPPGLPGLRGDVGAKGEKGHP 1413

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G IGL G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1414 GLIGLIGPPGEQGEKGDRGLPGPQGSAGQKGETGI 1448



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 45/174 (25%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------GPPG--- 149
            PPG +G  G+ G  G +GE GVKG RGE+G  G                    GP G   
Sbjct: 1208 PPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDDGPKGNPG 1267

Query: 150  ------------------PQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMG 188
                                G  GD G+ G  G  G PGP    G PG  GKRGP    G
Sbjct: 1268 PVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGP---AG 1324

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
             PG  G  G  G  G+PG  G PG+ G  G  G  G PG DG+ G  G+ G++G
Sbjct: 1325 TPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQG 1378



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 56/144 (38%), Gaps = 49/144 (34%)

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG----------------------- 206
           GP GI G+ G  G  G+ G PGR GL G DG PG PG                       
Sbjct: 411 GPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQ 470

Query: 207 --------------LDGIP------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                         L G P      GR G  G PG  GL G+ G  G  G  G +G+TGP
Sbjct: 471 EAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP 530

Query: 247 ------RGNRGKSGINGVPGTPAI 264
                 RG  G  G  G+PG P +
Sbjct: 531 PGKAGRRGRAGADGARGMPGEPGV 554



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 86/252 (34%), Gaps = 108/252 (42%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKR-------------- 160
             G  GE GA+G  G  G +G++G  G  GPPGP   QG+PG  G++              
Sbjct: 1122 AGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGP 1181

Query: 161  -------------------------GPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPG- 191
                                     GP G+ G PG  G PG +G+   +GP+G+ G  G 
Sbjct: 1182 PGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGE 1241

Query: 192  --------------------------------------------RIGLDGRDGLPGEPGL 207
                                                        + G  G  G  GEPG 
Sbjct: 1242 SGQPGEAGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQ 1301

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------------------TGPRGN 249
             G PG  G +G PG  G  G  G PG  G  GEKG                    GP G 
Sbjct: 1302 PGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGK 1361

Query: 250  RGKSGINGVPGT 261
             G  G+ G+PG+
Sbjct: 1362 PGPDGLRGLPGS 1373


>gi|114051163|ref|NP_001039664.1| collagen alpha-2(XI) chain precursor [Bos taurus]
 gi|108935971|sp|Q32S24.1|COBA2_BOVIN RecName: Full=Collagen alpha-2(XI) chain; Flags: Precursor
 gi|63169169|gb|AAY34705.1| collagen type XI alpha 2 [Bos taurus]
          Length = 1736

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 89/197 (45%), Gaps = 51/197 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE G +G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 660 PGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 719

Query: 172 QGIPG------------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGE--- 204
           +GI G                        D G +G +G++G PG  G DG +G  G    
Sbjct: 720 RGIKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGP 779

Query: 205 ------------------PGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGE 240
                             PGL G PGR       G  G PG  G  G  G+ G +G  GE
Sbjct: 780 TGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGE 839

Query: 241 KGMTGPRGNRGKSGING 257
           +G TGPRG RG  G  G
Sbjct: 840 RGPTGPRGQRGPRGATG 856



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 95/204 (46%), Gaps = 54/204 (26%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRG 161
           PPG  G  G+ G  GA+G   E GVKG+RG  G PG+ G  G       QG+PG  G+ G
Sbjct: 530 PPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG 589

Query: 162 PKGDMGYPGPQGIPGDEGKRG------------------------PKGDM---------- 187
            +GD G  GP+G+PG+ G RG                        PKG +          
Sbjct: 590 ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPG 649

Query: 188 --------GYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   G PG    IG  G  G  G+PGL G+PG +G  G PGK+G PG  G  G +G
Sbjct: 650 QQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 709

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GPRG +G  GI G+ G
Sbjct: 710 PQGPLGYPGPRGIKGVDGIRGLKG 733



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 78/165 (47%), Gaps = 30/165 (18%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KG+RGE G PG  G PGP G      + GP G +G  GP G PG EG++G KG  G P
Sbjct: 1288 GAKGDRGEDGEPGQPGSPGPTG------ENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDP 1341

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---------------- 234
            G +G  G+ G  G  G  G PG +G+ G+PG  G  G+ G  G                 
Sbjct: 1342 GAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLR 1401

Query: 235  --NGTNGEK------GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               G  GEK      G+ GP G +G+ G  G+PG       K E+
Sbjct: 1402 GDTGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSTGQKGET 1446



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 88/197 (44%), Gaps = 57/197 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------- 161
           PGL G  G +G+ GA+G  G  GE GE+G  G +GP   +G+PG+ G RG          
Sbjct: 564 PGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGP---RGLPGESGPRGLLGPKGPPGI 620

Query: 162 --------------PKGDM------------------GYPGPQGIPGDEGKRGPKGDMGY 189
                         PKG +                  G PGPQG  G  G++GP+G  G 
Sbjct: 621 PGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGL 680

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMD---------GIPGKDGLPGKDGIPGTNGTNGE 240
           PG   + G DG PG PG +G PG  G           G PG  G+ G DGI G  G  GE
Sbjct: 681 PG---MPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGIKGVDGIRGLKGHKGE 737

Query: 241 KGMTGPRGNRGKSGING 257
           KG  G  G +G  G+ G
Sbjct: 738 KGEDGFPGFKGDMGVKG 754



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 89/197 (45%), Gaps = 54/197 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+GQ G  G KGE G  G +G +G  G++GPPG             +G+PG+ G  
Sbjct: 496 GRPGPLGQPGSPGMKGESGDLGPQGPRGPQGLMGPPGKAGRRGRAGADGARGMPGEPGV- 554

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----- 215
             KGD G+ G  G+PG++G RG  G  G PG  G DG  G  GE G  G+PG +G     
Sbjct: 555 --KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLL 612

Query: 216 ----------------MDGIPGKDG---------------LPGKDGIPGTNGTNGEKGMT 244
                           MDG  G  G                PG  G+PG  G  G  G  
Sbjct: 613 GPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEK 672

Query: 245 GPRGNRGKSGINGVPGT 261
           GP   RGK G+ G+PG+
Sbjct: 673 GP---RGKPGLPGMPGS 686



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 85/197 (43%), Gaps = 70/197 (35%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGK-------------------------------- 159
           ++G  G  G PG  GPPG  G+PG +G                                 
Sbjct: 415 IQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQA 474

Query: 160 -----------RGPKGDMGY---PGPQGIPGD------------EGKRGPKGDMGYP--- 190
                      RGP G MGY   PGP G PG             +G RGP+G MG P   
Sbjct: 475 QAILQQARVALRGPPGPMGYTGRPGPLGQPGSPGMKGESGDLGPQGPRGPQGLMGPPGKA 534

Query: 191 ---GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEK--- 241
              GR G DG  G+PGEPG+ G  G +G+ G+PG+ G     G  G+PG  G +GE+   
Sbjct: 535 GRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDD 594

Query: 242 GMTGPRGNRGKSGINGV 258
           G  GPRG  G+SG  G+
Sbjct: 595 GEIGPRGLPGESGPRGL 611



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 76/160 (47%), Gaps = 30/160 (18%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G    T E  PPG   P+G++G  G  G  G +GE+G KG PG VG PG         K 
Sbjct: 1303 GSPGPTGENGPPG---PLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPG---------KT 1350

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------GLPGEP 205
            GP   +G  GP G PG +G RG  G +G  GR G  G+                G  G  
Sbjct: 1351 GP---VGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDTGAK 1407

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G  G PG  G+ G PG+ G  G  G+PG  G+ G+KG TG
Sbjct: 1408 GEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSTGQKGETG 1447



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 94/226 (41%), Gaps = 75/226 (33%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---------------------GP---- 147
           GL GP G+ GE G  GE+G +G  GE G  G++                     GP    
Sbjct: 580 GLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSL 639

Query: 148 --------------PGPQGIPGDE------GKRGPKGDMGYP---------------GPQ 172
                         PG QG+PG +      G++GP+G  G P               GP 
Sbjct: 640 GPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPP 699

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G++G  GP+G +GYPG  G+ G DG+ G  G  G  G +G  G  G  G+ G  G  
Sbjct: 700 GTKGNQGPSGPQGPLGYPGPRGIKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEV 759

Query: 233 GTNGTNGEKGMTGPR---------------GNRGKSGINGVPGTPA 263
           G  G+ GE G  GP+               G +GK G+ G+PG P 
Sbjct: 760 GVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPG 805



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 78/184 (42%), Gaps = 42/184 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------------PQG--- 152
            PPG +G  G+ G  G +GE GVKG RGE+G  G  G  G               P+G   
Sbjct: 1208 PPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGETGQAGEAGPPGPKGPTGDDGPKGNPG 1267

Query: 153  ---------------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
                             G +G +G +G+ G PG  G PG  G+ GP G +G         
Sbjct: 1268 PVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLG--------- 1318

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            + G  G PG +G  G  G  G PG  G PGK G  G  G  G+ G  G RG  G  G  G
Sbjct: 1319 KRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQG 1378

Query: 258  VPGT 261
             PG 
Sbjct: 1379 RPGA 1382



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 72/167 (43%), Gaps = 33/167 (19%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP------------GPQGIP 175
            G  G KGE GE G+PGV G PG +G  G+ G++G  G  G              GP+G P
Sbjct: 1207 GPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGETGQAGEAGPPGPKGPTGDDGPKGNP 1266

Query: 176  ---------------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                                 G +G RG  G+ G PG  G  G +G PG  G  G  G  
Sbjct: 1267 GPVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGTP 1326

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G +G  G+ G  G  G  G  G  G  G  GP G  G  G+ G+PG+
Sbjct: 1327 GPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGS 1373



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 86/227 (37%), Gaps = 84/227 (37%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKR-------------- 160
             G  GE GA+G  G  G +G++G  G  GPPGP   QG+PG  G++              
Sbjct: 1122 AGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGP 1181

Query: 161  -------------------------GPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGR 192
                                     GP G+ G PG  G PG +G+   +GP+G+ G  G 
Sbjct: 1182 PGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGE 1241

Query: 193  IGLDG---------------------------------------RDGLPGEPGLDGIPGR 213
             G  G                                       +DG  G+ G DG PG+
Sbjct: 1242 TGQAGEAGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQ 1301

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G++G PG  G  G  GT G +G  G +G +G  G  G PG
Sbjct: 1302 PGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPG 1348


>gi|296474575|tpg|DAA16690.1| TPA: collagen alpha-2(XI) chain precursor [Bos taurus]
          Length = 1736

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 89/197 (45%), Gaps = 51/197 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE G +G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 660 PGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 719

Query: 172 QGIPG------------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGE--- 204
           +GI G                        D G +G +G++G PG  G DG +G  G    
Sbjct: 720 RGIKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGP 779

Query: 205 ------------------PGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGE 240
                             PGL G PGR       G  G PG  G  G  G+ G +G  GE
Sbjct: 780 TGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGE 839

Query: 241 KGMTGPRGNRGKSGING 257
           +G TGPRG RG  G  G
Sbjct: 840 RGPTGPRGQRGPRGATG 856



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 95/204 (46%), Gaps = 54/204 (26%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRG 161
           PPG  G  G+ G  GA+G   E GVKG+RG  G PG+ G  G       QG+PG  G+ G
Sbjct: 530 PPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG 589

Query: 162 PKGDMGYPGPQGIPGDEGKRG------------------------PKGDM---------- 187
            +GD G  GP+G+PG+ G RG                        PKG +          
Sbjct: 590 ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPG 649

Query: 188 --------GYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   G PG    IG  G  G  G+PGL G+PG +G  G PGK+G PG  G  G +G
Sbjct: 650 QQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 709

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GPRG +G  GI G+ G
Sbjct: 710 PQGPLGYPGPRGIKGVDGIRGLKG 733



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 78/165 (47%), Gaps = 30/165 (18%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KG+RGE G PG  G PGP G      + GP G +G  GP G PG EG++G KG  G P
Sbjct: 1288 GAKGDRGEDGEPGQPGSPGPTG------ENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDP 1341

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT---------------- 234
            G +G  G+ G  G  G  G PG +G+ G+PG  G  G+ G  G                 
Sbjct: 1342 GAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLR 1401

Query: 235  --NGTNGEK------GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               G  GEK      G+ GP G +G+ G  G+PG       K E+
Sbjct: 1402 GDTGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSTGQKGET 1446



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 88/197 (44%), Gaps = 57/197 (28%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------- 161
           PGL G  G +G+ GA+G  G  GE GE+G  G +GP   +G+PG+ G RG          
Sbjct: 564 PGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGP---RGLPGESGPRGLLGPKGPPGI 620

Query: 162 --------------PKGDM------------------GYPGPQGIPGDEGKRGPKGDMGY 189
                         PKG +                  G PGPQG  G  G++GP+G  G 
Sbjct: 621 PGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGL 680

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMD---------GIPGKDGLPGKDGIPGTNGTNGE 240
           PG   + G DG PG PG +G PG  G           G PG  G+ G DGI G  G  GE
Sbjct: 681 PG---MPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGIKGVDGIRGLKGHKGE 737

Query: 241 KGMTGPRGNRGKSGING 257
           KG  G  G +G  G+ G
Sbjct: 738 KGEDGFPGFKGDMGVKG 754



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 89/197 (45%), Gaps = 54/197 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+GQ G  G KGE G  G +G +G  G++GPPG             +G+PG+ G  
Sbjct: 496 GRPGPLGQPGSPGMKGESGDLGPQGPRGPQGLMGPPGKAGRRGRAGADGARGMPGEPGV- 554

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----- 215
             KGD G+ G  G+PG++G RG  G  G PG  G DG  G  GE G  G+PG +G     
Sbjct: 555 --KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLL 612

Query: 216 ----------------MDGIPGKDG---------------LPGKDGIPGTNGTNGEKGMT 244
                           MDG  G  G                PG  G+PG  G  G  G  
Sbjct: 613 GPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEK 672

Query: 245 GPRGNRGKSGINGVPGT 261
           GP   RGK G+ G+PG+
Sbjct: 673 GP---RGKPGLPGMPGS 686



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 86/196 (43%), Gaps = 64/196 (32%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK--------------------------- 159
           +G  G  G+ GE+G PG  G PG  G PG  G                            
Sbjct: 416 QGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQ 475

Query: 160 ----------RGPKGDMGY---PGPQGIPGD------------EGKRGPKGDMGYP---- 190
                     RGP G MGY   PGP G PG             +G RGP+G MG P    
Sbjct: 476 AILQQARMALRGPPGPMGYTGRPGPLGQPGSPGMKGESGDLGPQGPRGPQGLMGPPGKAG 535

Query: 191 --GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEK---G 242
             GR G DG  G+PGEPG+ G  G +G+ G+PG+ G     G  G+PG  G +GE+   G
Sbjct: 536 RRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDG 595

Query: 243 MTGPRGNRGKSGINGV 258
             GPRG  G+SG  G+
Sbjct: 596 EIGPRGLPGESGPRGL 611



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 76/160 (47%), Gaps = 30/160 (18%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            G    T E  PPG   P+G++G  G  G  G +GE+G KG PG VG PG         K 
Sbjct: 1303 GSPGPTGENGPPG---PLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPG---------KT 1350

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------GLPGEP 205
            GP   +G  GP G PG +G RG  G +G  GR G  G+                G  G  
Sbjct: 1351 GP---VGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDTGAK 1407

Query: 206  GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G  G PG  G+ G PG+ G  G  G+PG  G+ G+KG TG
Sbjct: 1408 GEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSTGQKGETG 1447



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 94/226 (41%), Gaps = 75/226 (33%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV---------------------GP---- 147
           GL GP G+ GE G  GE+G +G  GE G  G++                     GP    
Sbjct: 580 GLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSL 639

Query: 148 --------------PGPQGIPGDE------GKRGPKGDMGYP---------------GPQ 172
                         PG QG+PG +      G++GP+G  G P               GP 
Sbjct: 640 GPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPP 699

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G++G  GP+G +GYPG  G+ G DG+ G  G  G  G +G  G  G  G+ G  G  
Sbjct: 700 GTKGNQGPSGPQGPLGYPGPRGIKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEV 759

Query: 233 GTNGTNGEKGMTGPR---------------GNRGKSGINGVPGTPA 263
           G  G+ GE G  GP+               G +GK G+ G+PG P 
Sbjct: 760 GVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPG 805



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 78/184 (42%), Gaps = 42/184 (22%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------------PQG--- 152
            PPG +G  G+ G  G +GE GVKG RGE+G  G  G  G               P+G   
Sbjct: 1208 PPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGETGQAGEAGPPGPKGPTGDDGPKGNPG 1267

Query: 153  ---------------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
                             G +G +G +G+ G PG  G PG  G+ GP G +G         
Sbjct: 1268 PVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLG--------- 1318

Query: 198  RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            + G  G PG +G  G  G  G PG  G PGK G  G  G  G+ G  G RG  G  G  G
Sbjct: 1319 KRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQG 1378

Query: 258  VPGT 261
             PG 
Sbjct: 1379 RPGA 1382



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 72/167 (43%), Gaps = 33/167 (19%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP------------GPQGIP 175
            G  G KGE GE G+PGV G PG +G  G+ G++G  G  G              GP+G P
Sbjct: 1207 GPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGETGQAGEAGPPGPKGPTGDDGPKGNP 1266

Query: 176  ---------------------GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                                 G +G RG  G+ G PG  G  G +G PG  G  G  G  
Sbjct: 1267 GPVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGTP 1326

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G +G  G+ G  G  G  G  G  G  G  GP G  G  G+ G+PG+
Sbjct: 1327 GPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGS 1373



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 86/227 (37%), Gaps = 84/227 (37%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKR-------------- 160
             G  GE GA+G  G  G +G++G  G  GPPGP   QG+PG  G++              
Sbjct: 1122 AGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGP 1181

Query: 161  -------------------------GPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPGR 192
                                     GP G+ G PG  G PG +G+   +GP+G+ G  G 
Sbjct: 1182 PGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGE 1241

Query: 193  IGLDG---------------------------------------RDGLPGEPGLDGIPGR 213
             G  G                                       +DG  G+ G DG PG+
Sbjct: 1242 TGQAGEAGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQ 1301

Query: 214  NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  G++G PG  G  G  GT G +G  G +G +G  G  G PG
Sbjct: 1302 PGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPG 1348


>gi|444730162|gb|ELW70553.1| Collagen alpha-1(IV) chain [Tupaia chinensis]
          Length = 701

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 70/122 (57%), Gaps = 5/122 (4%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
           KG+ GV GERG  G PG+ GPPG    PG +G+ G  G  G PG  G PG+ GK G KG 
Sbjct: 74  KGDQGVPGERGPPGTPGICGPPG---KPGKDGENGQPGIPGLPGDPGYPGEPGKDGEKGI 130

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PG  GL G  G PG+  +   PG  G  G  G  G PG  G+PG++G +G  G+ GP
Sbjct: 131 PGTPGTPGLPGPKGEPGD--ILTFPGMKGDKGEMGSPGAPGLPGLPGSSGQDGLPGLPGP 188

Query: 247 RG 248
           +G
Sbjct: 189 KG 190



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G  G  G  G+ G  GE G+ G PG+   PG  G PG+ GK G KG  G PG 
Sbjct: 80  PGERGPPGTPGICGPPGKPGKDGENGQPGIPGL---PGDPGYPGEPGKDGEKGIPGTPGT 136

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            G+PG +G+  P   + +PG  G  G  G PG PGL G+PG +G DG+P   GLPG  G
Sbjct: 137 PGLPGPKGE--PGDILTFPGMKGDKGEMGSPGAPGLPGLPGSSGQDGLP---GLPGPKG 190



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 74/163 (45%), Gaps = 39/163 (23%)

Query: 114 LQGPIGQKGEIGA-------------KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            QGP G+KGE G              K  + V+ ++G++G PG  GPPG  GI G  GK 
Sbjct: 39  FQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGVPGERGPPGTPGICGPPGKP 98

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
           G  G+ G PG  G+PGD G         YPG  G DG  G+PG                P
Sbjct: 99  GKDGENGQPGIPGLPGDPG---------YPGEPGKDGEKGIPG---------------TP 134

Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  GLPG  G PG   T    GM G +G  G  G  G+PG P 
Sbjct: 135 GTPGLPGPKGEPGDILTF--PGMKGDKGEMGSPGAPGLPGLPG 175



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 71/145 (48%), Gaps = 31/145 (21%)

Query: 130 MGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYPGPQ-GIPGDEGKRGPKG 185
           +G KGE+GE G PG+ G PGP   QG+PGD G+ G  G  G PGP  G   ++     KG
Sbjct: 318 LGSKGEKGEPGLPGIPGVPGPKGYQGLPGDPGQPGLTGQPGLPGPSAGYAHNQKYDESKG 377

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---------------------------DG 218
           + G PG  G+ G  GLPG PG  G+ G +G+                           +G
Sbjct: 378 NPGRPGLNGMKGDPGLPGVPGFPGMKGPSGLPGSTGPEGEPGLLGPPGPIGPPGDPGRNG 437

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGM 243
           +PG DG  G+ G PG  G  G +G+
Sbjct: 438 LPGFDGAGGRKGDPGLPGQPGTRGL 462



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 46/92 (50%), Gaps = 15/92 (16%)

Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
           KGD G PG  G  G  G+ G PG    PG++G +G PG  GLPG  G PG  G +GEKG 
Sbjct: 74  KGDQGVPGERGPPGTPGICGPPG---KPGKDGENGQPGIPGLPGDPGYPGEPGKDGEKG- 129

Query: 244 TGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
                      I G PGTP +   K E   +L
Sbjct: 130 -----------IPGTPGTPGLPGPKGEPGDIL 150


>gi|402885770|ref|XP_003906319.1| PREDICTED: collagen alpha-1(II) chain isoform 2 [Papio anubis]
          Length = 1418

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 92/198 (46%), Gaps = 33/198 (16%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 746 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 805

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 806 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 865

Query: 187 MGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G PGR    GL G  G PGE G  G  G +G DG PG  GL G+ GI G  G  GE+G 
Sbjct: 866 SGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 925

Query: 244 TGPRGNRGKSGINGVPGT 261
            G  G  G+ G  G PG 
Sbjct: 926 PGLPGPSGEPGKQGAPGA 943



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 378 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 437

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 438 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 497

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 498 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 557

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 558 GLRGLPG 564



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 84/187 (44%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 732 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 791

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 851

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ 
Sbjct: 852 GPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQR 911

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 912 GIVGLPG 918



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 306 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 365

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 366 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 425

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 426 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 482

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 483 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 511



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 619 EAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGASGPAGPPGAQGPPG 678

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 738

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 739 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 789

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 790 DAGAPGPQGPSGAPG 804



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 681 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 734

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 735 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 791

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 834



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 88/213 (41%), Gaps = 57/213 (26%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
           QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 782 QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 841

Query: 150 -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG---PKGDMGY 189
                            P+G  GD G  G  GD G  GP G PG++G+ G   P G  G 
Sbjct: 842 NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGP 901

Query: 190 PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
           PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 902 PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 961

Query: 228 -----KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                ++G PG +G  G  G  G +G+RG++G 
Sbjct: 962 AGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 994



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 453 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 512

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 513 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 569

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 570 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 629

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 630 GERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGAS 665



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 67/141 (47%), Gaps = 27/141 (19%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------- 181
           ++G  GE+GA G+ GP            +G +GD+G  GP+G PG +G R          
Sbjct: 679 LQGMPGERGAAGIAGP------------KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPG 726

Query: 182 -----GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                G KG++G PG  G  G  G PGE G  G PG  G  G PG DG PG  G  G  G
Sbjct: 727 PAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAG 786

Query: 237 TNGEKGMTGPRGNRGKSGING 257
             G+ G  GP+G  G  G  G
Sbjct: 787 QKGDAGAPGPQGPSGAPGPQG 807



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 85/199 (42%), Gaps = 30/199 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 738

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            PG  G  G +G PG+ G+ GP G  G+ GP G  G  G +G +G+ G  G  G  G  G
Sbjct: 739 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 798

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------------TNGEKGMTG 245
             G PG  G  G  G  G  G  G PG  G PG  G                 G  G  G
Sbjct: 799 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDG 858

Query: 246 PRGNRGKSGINGVPGTPAI 264
           P+G RG SG  G  G P +
Sbjct: 859 PKGARGDSGPPGRAGDPGL 877



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 305 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 358

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 359 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 418

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 419 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 478

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 479 PGRPGEPGLPGAR 491



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 83/208 (39%), Gaps = 69/208 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
            PGLQGP G  GE         KGE G+ G  G  GPPGPQG+ G  G      +RG +G 
Sbjct: 875  PGLQGPAGPPGE---------KGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 925

Query: 166  MGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGI 210
             G PGP G PG +G  G  GD                G PGR G          PG DG 
Sbjct: 926  PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADGP 976

Query: 211  PGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTNGE 240
            PGR+G  G+                               G  G  G  G  G +G  G 
Sbjct: 977  PGRDGAAGVKGDRGETGAVGAPGSPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGA 1036

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1037 RGIQGPQGPRGDKGEAGEPGERGLKGHR 1064



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 83/168 (49%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  G +G+PG  G  GPKG              
Sbjct: 618 GEAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGASGPAGPPGAQGPP 677

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 678 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 737

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 738 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 785



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 90/227 (39%), Gaps = 90/227 (39%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGD 165
           +G  G  GA GE G  GE+G  GAPG+      +G+PG +G+             G +G+
Sbjct: 533 MGFPGPKGANGEPGKAGEKGLPGAPGL------RGLPGKDGETGAAGPPGPAGPAGERGE 586

Query: 166 MGYPGP---------------------QGIPGDEGKR---GPKGDMGYPGR------IGL 195
            G PGP                     QG+PG+ G     GP+G+ G+PG        GL
Sbjct: 587 QGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGSQGL 646

Query: 196 DGRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GK 222
            G  GLPG PG D                     G+PG  G  GI             G 
Sbjct: 647 QGARGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGP 706

Query: 223 DGLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 707 EGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 753



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 215 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 274

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 275 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 334

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 335 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 391

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 392 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 422


>gi|109096331|ref|XP_001100559.1| PREDICTED: collagen alpha-1(II) chain-like isoform 3 [Macaca
           mulatta]
          Length = 1418

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 92/198 (46%), Gaps = 33/198 (16%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 746 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 805

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 806 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 865

Query: 187 MGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G PGR    GL G  G PGE G  G  G +G DG PG  GL G+ GI G  G  GE+G 
Sbjct: 866 SGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 925

Query: 244 TGPRGNRGKSGINGVPGT 261
            G  G  G+ G  G PG 
Sbjct: 926 PGLPGPSGEPGKQGAPGA 943



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 378 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 437

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 438 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 497

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 498 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 557

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 558 GLRGLPG 564



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 84/187 (44%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 732 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 791

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 851

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ 
Sbjct: 852 GPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQR 911

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 912 GIVGLPG 918



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 306 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 365

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 366 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 425

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 426 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 482

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 483 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 511



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 619 EAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGASGPAGPPGAQGPPG 678

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 738

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 739 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 789

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 790 DAGAPGPQGPSGAPG 804



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 681 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 734

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 735 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 791

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 834



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 88/213 (41%), Gaps = 57/213 (26%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
           QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 782 QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 841

Query: 150 -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG---PKGDMGY 189
                            P+G  GD G  G  GD G  GP G PG++G+ G   P G  G 
Sbjct: 842 NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGP 901

Query: 190 PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
           PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 902 PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 961

Query: 228 -----KDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
                ++G PG +G  G  G  G +G+RG++G 
Sbjct: 962 AGEPGREGSPGADGPPGRDGAAGVKGDRGETGA 994



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 453 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 512

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 513 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 569

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 570 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 629

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 630 GERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGAS 665



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 67/141 (47%), Gaps = 27/141 (19%)

Query: 132 VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR---------- 181
           ++G  GE+GA G+ GP            +G +GD+G  GP+G PG +G R          
Sbjct: 679 LQGMPGERGAAGIAGP------------KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPG 726

Query: 182 -----GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                G KG++G PG  G  G  G PGE G  G PG  G  G PG DG PG  G  G  G
Sbjct: 727 PAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAG 786

Query: 237 TNGEKGMTGPRGNRGKSGING 257
             G+ G  GP+G  G  G  G
Sbjct: 787 QKGDAGAPGPQGPSGAPGPQG 807



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 85/199 (42%), Gaps = 30/199 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 738

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            PG  G  G +G PG+ G+ GP G  G+ GP G  G  G +G +G+ G  G  G  G  G
Sbjct: 739 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 798

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------------TNGEKGMTG 245
             G PG  G  G  G  G  G  G PG  G PG  G                 G  G  G
Sbjct: 799 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDG 858

Query: 246 PRGNRGKSGINGVPGTPAI 264
           P+G RG SG  G  G P +
Sbjct: 859 PKGARGDSGPPGRAGDPGL 877



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 305 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 358

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 359 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 418

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 419 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 478

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 479 PGRPGEPGLPGAR 491



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 83/208 (39%), Gaps = 69/208 (33%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGPKGD 165
            PGLQGP G  GE         KGE G+ G  G  GPPGPQG+ G  G      +RG +G 
Sbjct: 875  PGLQGPAGPPGE---------KGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 925

Query: 166  MGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGLDGRDGLPGEPGLDGI 210
             G PGP G PG +G  G  GD                G PGR G          PG DG 
Sbjct: 926  PGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG---------SPGADGP 976

Query: 211  PGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTNGE 240
            PGR+G  G+                               G  G  G  G  G +G  G 
Sbjct: 977  PGRDGAAGVKGDRGETGAVGAPGSPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGA 1036

Query: 241  KGMTGPRGNRGKSGINGVPGTPAICAYK 268
            +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1037 RGIQGPQGPRGDKGEAGEPGERGLKGHR 1064



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 83/168 (49%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  G +G+PG  G  GPKG              
Sbjct: 618 GEAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGTDGPKGASGPAGPPGAQGPP 677

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 678 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 737

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 738 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 785



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 90/227 (39%), Gaps = 90/227 (39%)

Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------RGPKGD 165
           +G  G  GA GE G  GE+G  GAPG+      +G+PG +G+             G +G+
Sbjct: 533 MGFPGPKGANGEPGKAGEKGLPGAPGL------RGLPGKDGETGAAGPPGPAGPAGERGE 586

Query: 166 MGYPGP---------------------QGIPGDEGKR---GPKGDMGYPGR------IGL 195
            G PGP                     QG+PG+ G     GP+G+ G+PG        GL
Sbjct: 587 QGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGSQGL 646

Query: 196 DGRDGLPGEPGLD---------------------GIPGRNGMDGIP------------GK 222
            G  GLPG PG D                     G+PG  G  GI             G 
Sbjct: 647 QGARGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGP 706

Query: 223 DGLPGKDGIPG---------TNGTNGEKGMTGPRGNRGKSGINGVPG 260
           +G PGKDG  G           G NGEKG  GP G  G +G  G PG
Sbjct: 707 EGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 753



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 215 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 274

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 275 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 334

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 335 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 391

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 392 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 422


>gi|426352701|ref|XP_004043848.1| PREDICTED: collagen alpha-2(XI) chain isoform 3 [Gorilla gorilla
           gorilla]
          Length = 1629

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 93/188 (49%), Gaps = 42/188 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE G +G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 553 PGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 612

Query: 172 QGIPGDEGKRGPKG------------------------DMGYPGRIGLD------GRDGL 201
           +G+ G +G RG KG                        D+G PG  G D      GR GL
Sbjct: 613 RGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGDVGVPGSRGEDGPEGPKGRTGL 672

Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGM------TGPRGN 249
            G+PG  G+ G  G  G+PG  G PG+       G PG  G +GEKG       +GPRG 
Sbjct: 673 TGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGE 732

Query: 250 RGKSGING 257
           RG +G  G
Sbjct: 733 RGPTGPRG 740



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 82/153 (53%), Gaps = 9/153 (5%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QGP+G  G  G KG  G++G +G KG  G  G P   G  GD G +G +GD+G PG
Sbjct: 600 PSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFP---GFKGDIGVKGDRGDVGVPG 656

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN------GMDGIPGKDG 224
            +G  G EG +G  G  G PG  GL G  G  G PGL G PGR       G  G PG  G
Sbjct: 657 SRGEDGPEGPKGRTGLTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASG 716

Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
             G  G+ G +G  GE+G TGPRG RG  G  G
Sbjct: 717 EKGARGLSGKSGPRGERGPTGPRGQRGPRGATG 749



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 79/150 (52%), Gaps = 12/150 (8%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G +G  G +G +G  GE+G +G PG+ G PG  G PG  GK GP G           G++
Sbjct: 548 GTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTK---------GNQ 598

Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
           G  GP+G +GYPG  G+ G DG+    GL G  G  G DG PG  G  G  G  G  G  
Sbjct: 599 GPSGPQGPLGYPGPRGVKGVDGI---RGLKGHKGEKGEDGFPGFKGDIGVKGDRGDVGVP 655

Query: 239 GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
           G +G  GP G +G++G+ G PG P +   K
Sbjct: 656 GSRGEDGPEGPKGRTGLTGDPGPPGLMGEK 685



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 79/149 (53%), Gaps = 18/149 (12%)

Query: 113 GLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
           GL+G  G+KGE    G KG++GVKG+RG+ G PG  G  GP      EG +G  G  G P
Sbjct: 623 GLKGHKGEKGEDGFPGFKGDIGVKGDRGDVGVPGSRGEDGP------EGPKGRTGLTGDP 676

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           GP G+ G++GK G  G  GYPGR G  G  G PG PG  G  G  G+          GK 
Sbjct: 677 GPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLS---------GKS 727

Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           G  G  G  G +G  GPRG  GKSG  G 
Sbjct: 728 GPRGERGPTGPRGQRGPRGATGKSGAKGT 756



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 95/204 (46%), Gaps = 54/204 (26%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRG 161
           PPG  G  G+ G  GA+G   E GVKG+RG  G PG+ G  G       QG+PG  G+ G
Sbjct: 423 PPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG 482

Query: 162 PKGDMGYPGPQGIPGDEGKRG------------------------PKGDM---------- 187
            +GD G  GP+G+PG+ G RG                        PKG +          
Sbjct: 483 ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPG 542

Query: 188 --------GYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   G PG    IG  G  G  G+PGL G+PG +G  G PGK+G PG  G  G +G
Sbjct: 543 QQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 602

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GPRG +G  GI G+ G
Sbjct: 603 PQGPLGYPGPRGVKGVDGIRGLKG 626



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 78/161 (48%), Gaps = 24/161 (14%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
            G +GE G  G+ G  G  GE G PG +G  GP G PG EG++G KG  G PG  G PG  
Sbjct: 1184 GDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGPEGRQGGKGAKGDPGAIGAPGKT 1243

Query: 179  GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM------------------DGIP 220
            G  GP G  G P   G DG  GLPG  G  G PG  G                    G  
Sbjct: 1244 GPVGPAGPAGKP---GPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAK 1300

Query: 221  GKDGLPGKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGV 258
            G+ G PG  G+   PG  G  G++G+ GP+G+ G+ G  G+
Sbjct: 1301 GEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGI 1341



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 87/193 (45%), Gaps = 45/193 (23%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------------PQGIPGDEGKR 160
           G  GP+GQ G  G KGE G  G +G +G  G+ GPPG             +G+PG+ G  
Sbjct: 389 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGV- 447

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI- 219
             KGD G+ G  G+PG++G RG  G  G PG  G DG  G  GE G  G+PG +G  G+ 
Sbjct: 448 --KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLL 505

Query: 220 --------------PGKDGLPGKDG---------------IPGTNGTNGEKGMTGPRGNR 250
                          G DG  G  G                PGT G  G +G  GP G +
Sbjct: 506 GPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEK 565

Query: 251 GKSGINGVPGTPA 263
           G  G  G+PG P 
Sbjct: 566 GPQGKPGLPGMPG 578



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 74/140 (52%), Gaps = 21/140 (15%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G MG  G  G  G PG    PG +G  GD G +GP+G  G  GP   PG  G+R   
Sbjct: 380 GPPGPMGYTGRPGPLGQPGS---PGLKGESGDLGPQGPRGPQGLTGP---PGKAGRR--- 430

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEK 241
                 GR G DG  G+PGEPG+ G  G +G+ G+PG+ G     G  G+PG  G +GE+
Sbjct: 431 ------GRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGER 484

Query: 242 ---GMTGPRGNRGKSGINGV 258
              G  GPRG  G+SG  G+
Sbjct: 485 GDDGEIGPRGLPGESGPRGL 504



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 96/230 (41%), Gaps = 57/230 (24%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G         P G QG  G  G+ G +G  G  G RG  G PGV G  G  G+PG  
Sbjct: 401 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLP 460

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIG-------------------- 194
           G++G +GD G  G  G PG++G+RG  G++   G PG  G                    
Sbjct: 461 GEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVR 520

Query: 195 -LDGRDGLPGE---------------PGLDGIP---------------GRNGMDGIPGKD 223
            +DG  G  G                PG  G+P               G+ G+ G+PG D
Sbjct: 521 GMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSD 580

Query: 224 GL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G    PGK+G PGT G  G  G  GP G  G  G+ GV G   +  +K E
Sbjct: 581 GPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 630



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 58/118 (49%), Gaps = 24/118 (20%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KG+RGE G PG  G PGP G      + GP G +G  GP G PG EG++G KG  G P
Sbjct: 1181 GAKGDRGEDGEPGQPGSPGPTG------ENGPPGPLGKRGPAGSPGPEGRQGGKGAKGDP 1234

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTG 245
            G I               G PG+ G  G  G  G PG D   G+PG+ G  G  G TG
Sbjct: 1235 GAI---------------GAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATG 1277



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 71/149 (47%), Gaps = 27/149 (18%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
            G    T E  PPG   P+G++G  G+ G  G +G +G KG PG +G PG   P G  G  
Sbjct: 1196 GSPGPTGENGPPG---PLGKRGPAGSPGPEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPA 1252

Query: 158  GKRGPKGDMGYPGP---QGIPGDEGKR------------------GPKGDMGYPGRIGLD 196
            GK GP G  G PG    QG PG  G+                   G KG+ G+PG IGL 
Sbjct: 1253 GKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLI 1312

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1313 GPPGEQGEKGDRGLPGPQGSPGQKGEMGI 1341



 Score = 43.5 bits (101), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 56/144 (38%), Gaps = 49/144 (34%)

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG----------------------- 206
           GP GI G+ G  G  G+ G PGR GL G DG PG PG                       
Sbjct: 304 GPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQ 363

Query: 207 --------------LDGIP------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                         L G P      GR G  G PG  GL G+ G  G  G  G +G+TGP
Sbjct: 364 EAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP 423

Query: 247 ------RGNRGKSGINGVPGTPAI 264
                 RG  G  G  G+PG P +
Sbjct: 424 PGKAGRRGRAGADGARGMPGEPGV 447


>gi|403301640|ref|XP_003941494.1| PREDICTED: collagen alpha-1(II) chain isoform 2 [Saimiri
           boliviensis boliviensis]
          Length = 1418

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 92/198 (46%), Gaps = 33/198 (16%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 746 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 805

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 806 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 865

Query: 187 MGYPGRI---GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
            G PGR    GL G  G PGE G  G  G +G DG PG  GL G+ GI G  G  GE+G 
Sbjct: 866 SGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGF 925

Query: 244 TGPRGNRGKSGINGVPGT 261
            G  G  G+ G  G PG 
Sbjct: 926 PGLPGPSGEPGKQGAPGA 943



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 378 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 437

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 438 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 497

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 498 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 557

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 558 GLRGLPG 564



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 84/187 (44%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 732 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 791

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 851

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G  G  GP+G  G+ 
Sbjct: 852 GPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGPPGPQGLAGQR 911

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 912 GIVGLPG 918



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 306 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 365

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 366 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 425

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 426 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 482

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 483 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 511



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 453 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 512

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 513 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 569

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 570 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 629

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RGN G  G+    G+PGTP     K  S
Sbjct: 630 GERGFPGERGNPGAQGLQGPRGLPGTPGTDGPKGAS 665



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 681 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 734

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 735 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 791

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 834



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 645 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 694

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 695 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 752

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 753 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 807



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 85/195 (43%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G  G  G++G RG  G PG  GP G               
Sbjct: 619 EAGAPGLVGPRGERGFPGERGNPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 678

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 738

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 739 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 789

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 790 DAGAPGPQGPSGAPG 804



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 87/211 (41%), Gaps = 57/211 (27%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------- 149
           QG      +   PG QGP G  G  G  G  G KG RG +G PG  G PG          
Sbjct: 782 QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGS 841

Query: 150 -----------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG---PKGDMGY 189
                            P+G  GD G  G  GD G  GP G PG++G+ G   P G  G 
Sbjct: 842 NGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGADGP 901

Query: 190 PGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPG------------------- 227
           PG  GL G+ G   LPG+ G  G PG  G  G PGK G PG                   
Sbjct: 902 PGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP 961

Query: 228 -----KDGIPGTNGTNGEKGMTGPRGNRGKS 253
                ++G PG +G  G  G  G +G+RG++
Sbjct: 962 AGEPGREGSPGADGPPGRDGAAGVKGDRGET 992



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 85/199 (42%), Gaps = 30/199 (15%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
           L  M G   +     P G +G +G+KG  GA G+ G +G               E+GE G
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 738

Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
            PG  G  G +G PG+ G+ GP G  G+ GP G  G  G +G +G+ G  G  G  G  G
Sbjct: 739 PPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 798

Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG---------------TNGEKGMTG 245
             G PG  G  G  G  G  G  G PG  G PG  G                 G  G  G
Sbjct: 799 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDG 858

Query: 246 PRGNRGKSGINGVPGTPAI 264
           P+G RG SG  G  G P +
Sbjct: 859 PKGARGDSGPPGRAGDPGL 877



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 305 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 358

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 359 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 418

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 419 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 478

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 479 PGRPGEPGLPGAR 491



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 614 QGVPGEAGAPGLVGPRGERGFPGERGNPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 673

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 674 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 733

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 734 KGEVGPPGPAGSAGARGAPG 753



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 215 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 274

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 275 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 334

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 335 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 391

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 392 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 422


>gi|301757107|ref|XP_002914384.1| PREDICTED: collagen alpha-2(XI) chain-like isoform 1 [Ailuropoda
           melanoleuca]
          Length = 1736

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 89/197 (45%), Gaps = 51/197 (25%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG QG IG  GE G +G+ G+ G  G  G PG  G  GP G  G++G  GP+G +GYPGP
Sbjct: 660 PGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGP 719

Query: 172 QGIPG------------------------DEGKRGPKGDMGYPGRIGLDGRDGLPGE--- 204
           +G+ G                        D G +G +G++G PG  G DG +G  G    
Sbjct: 720 RGVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGP 779

Query: 205 ------------------PGLDGIPGRN------GMDGIPGKDGLPGKDGIPGTNGTNGE 240
                             PGL G PGR       G  G PG  G  G  G+ G +G  GE
Sbjct: 780 TGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGE 839

Query: 241 KGMTGPRGNRGKSGING 257
           +G TGPRG RG  G  G
Sbjct: 840 RGPTGPRGQRGPRGATG 856



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 95/204 (46%), Gaps = 54/204 (26%)

Query: 111 PPGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPG------PQGIPGDEGKRG 161
           PPG  G  G+ G  GA+G   E GVKG+RG  G PG+ G  G       QG+PG  G+ G
Sbjct: 530 PPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG 589

Query: 162 PKGDMGYPGPQGIPGDEGKRG------------------------PKGDM---------- 187
            +GD G  GP+G+PG+ G RG                        PKG +          
Sbjct: 590 ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPG 649

Query: 188 --------GYPG---RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
                   G PG    IG  G  G  G+PGL G+PG +G  G PGK+G PG  G  G +G
Sbjct: 650 QQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 709

Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
             G  G  GPRG +G  GI G+ G
Sbjct: 710 PQGPLGYPGPRGVKGVDGIRGLKG 733



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 30/165 (18%)

Query: 131  GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
            G KG+RGE G PG  G PGP G      + GP G +G  GP G+PG EG++G KG  G P
Sbjct: 1288 GAKGDRGEDGEPGQPGSPGPTG------ENGPPGPLGKRGPAGMPGPEGRQGEKGAKGDP 1341

Query: 191  GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN--------------- 235
            G +G  G+ G  G  G  G PG +G+ G+PG  G  G+ G  G                 
Sbjct: 1342 GAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLR 1401

Query: 236  ---GTNGEK------GMTGPRGNRGKSGINGVPGTPAICAYKRES 271
               G  GEK      G+ GP G +G+ G  G+PG       K E+
Sbjct: 1402 GDVGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGQKGET 1446



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 88/191 (46%), Gaps = 51/191 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG---------- 161
           PGL G  G +G+ GA+G  G  GE GE+G  G +GP   +G+PG+ G RG          
Sbjct: 564 PGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGP---RGLPGESGPRGLLGPKGPPGI 620

Query: 162 --------------PKGDM------------------GYPGPQGIPGDEGKRGPKGDMGY 189
                         PKG +                  G PGPQG  G  G++GP+G  G 
Sbjct: 621 PGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGL 680

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
           PG   + G DG PG PG +G PG  G  G  G     G  G PG  G  G  G+ G +G+
Sbjct: 681 PG---MPGSDGPPGHPGKEGPPGTKGNQGPSGPQ---GPLGYPGPRGVKGVDGIRGLKGH 734

Query: 250 RGKSGINGVPG 260
           +G+ G +G PG
Sbjct: 735 KGEKGEDGFPG 745



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 87/201 (43%), Gaps = 64/201 (31%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---------------------- 159
           G  G +G  G  G+ GE+G PG  G PG  G PG  G                       
Sbjct: 411 GPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQ 470

Query: 160 ---------------RGPKGDMGY---PGPQGIPGD------------EGKRGPKGDMGY 189
                          RGP G MGY   PGP G PG             +G RGP+G  G 
Sbjct: 471 EAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP 530

Query: 190 P------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGE 240
           P      GR G DG  G+PGEPG+ G  G +G+ G+PG+ G     G  G+PG  G +GE
Sbjct: 531 PGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGE 590

Query: 241 K---GMTGPRGNRGKSGINGV 258
           +   G  GPRG  G+SG  G+
Sbjct: 591 RGDDGEIGPRGLPGESGPRGL 611



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 96/230 (41%), Gaps = 57/230 (24%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G         P G QG  G  G+ G +G  G  G RG  G PGV G  G  G+PG  
Sbjct: 508 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLP 567

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDM---GYPGRIG-------------------- 194
           G++G +GD G  G  G PG++G+RG  G++   G PG  G                    
Sbjct: 568 GEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVR 627

Query: 195 -LDGRDGLPGE---------------PGLDGIP---------------GRNGMDGIPGKD 223
            +DG  G  G                PG  G+P               G+ G+ G+PG D
Sbjct: 628 GMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSD 687

Query: 224 GL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G    PGK+G PGT G  G  G  GP G  G  G+ GV G   +  +K E
Sbjct: 688 GPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 737



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 74/157 (47%), Gaps = 30/157 (19%)

Query: 119  GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-------- 170
            G +GE G  G+ G  G  GE G PG +G  GP G+PG EG++G KG  G PG        
Sbjct: 1291 GDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGMPGPEGRQGEKGAKGDPGAVGAPGKT 1350

Query: 171  -------PQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------GLPGEPGLD 208
                   P G PG +G RG  G +G  GR G  G+                G  G  G  
Sbjct: 1351 GPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDVGAKGEK 1410

Query: 209  GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            G PG  G+ G PG+ G  G  G+PG  G+ G+KG TG
Sbjct: 1411 GHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGQKGETG 1447



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 71/149 (47%), Gaps = 27/149 (18%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
            G    T E  PPG   P+G++G  G  G  G +GE+G KG PG VG PG   P G  G  
Sbjct: 1303 GSPGPTGENGPPG---PLGKRGPAGMPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPA 1359

Query: 158  GKRGPKGDMGYPGP---QGIPGDEGKR------------------GPKGDMGYPGRIGLD 196
            GK GP G  G PG    QG PG  G+                   G KG+ G+PG IGL 
Sbjct: 1360 GKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDVGAKGEKGHPGLIGLI 1419

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
            G  G  GE G  G+PG  G  G  G+ G+
Sbjct: 1420 GPPGEQGEKGDRGLPGPQGSAGQKGETGI 1448



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 75/180 (41%), Gaps = 48/180 (26%)

Query: 111  PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------GPPG--- 149
            PPG +G  G+ G  G +GE GVKG RGE+G  G                    GP G   
Sbjct: 1208 PPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDDGPKGNPG 1267

Query: 150  ------------------PQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMG 188
                                G  GD G+ G  G  G PGP    G PG  GKRGP    G
Sbjct: 1268 PVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGP---AG 1324

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGMTG 245
             PG  G  G  G  G+PG  G PG+ G  G  G  G PG D   G+PG+ G  G  G TG
Sbjct: 1325 MPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATG 1384



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 85/204 (41%), Gaps = 57/204 (27%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG  G  G+ G +G  G  G+KGE G+ G     GP GPQG+ G  GK G +G  G  G
Sbjct: 488 PPGPMGYTGRPGPLGQPGSPGLKGESGDLGP---QGPRGPQGLTGPPGKAGRRGRAGADG 544

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
            +G+PG+ G    KGD G+ G  GL G  G  G+ G  G+PG  G DG  G DG  G  G
Sbjct: 545 ARGMPGEPGV---KGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRG 601

Query: 231 IPGT------------------------NGTNGEKGM----------------------- 243
           +PG                         +G +G KG                        
Sbjct: 602 LPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPG 661

Query: 244 ----TGPRGNRGKSGINGVPGTPA 263
                GP G +G  G  G+PG P 
Sbjct: 662 PQGAIGPHGEKGPRGKPGLPGMPG 685



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 56/144 (38%), Gaps = 49/144 (34%)

Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG----------------------- 206
           GP GI G+ G  G  G+ G PGR GL G DG PG PG                       
Sbjct: 411 GPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQ 470

Query: 207 --------------LDGIP------GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
                         L G P      GR G  G PG  GL G+ G  G  G  G +G+TGP
Sbjct: 471 EAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP 530

Query: 247 ------RGNRGKSGINGVPGTPAI 264
                 RG  G  G  G+PG P +
Sbjct: 531 PGKAGRRGRAGADGARGMPGEPGV 554



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 72/179 (40%), Gaps = 48/179 (26%)

Query: 128  GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------------GPKGDM 166
            G  G KGE GE G+PGV G PG +G  G+ G++                     GPKG+ 
Sbjct: 1207 GPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDDGPKGNP 1266

Query: 167  ------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
                                    G  G  G PG  G  GP G+ G PG +G  G  G+P
Sbjct: 1267 GPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGMP 1326

Query: 203  GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
            G    +G  G  G  G PG  G PGK G  G  G  G+ G  G RG  G  G  G PG 
Sbjct: 1327 GP---EGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGA 1382



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 87/252 (34%), Gaps = 108/252 (42%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKR-------------- 160
             G  GE GA+G  G  G +G++G  G  GPPGP   QG+PG  G++              
Sbjct: 1122 AGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGP 1181

Query: 161  -------------------------GPKGDMGYPGPQGIPGDEGK---RGPKGDMGYPG- 191
                                     GP G+ G PG  G PG +G+   +GP+G+ G  G 
Sbjct: 1182 PGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGE 1241

Query: 192  --------------------------------------------RIGLDGRDGLPGEPGL 207
                                                        + G  G  G  GEPG 
Sbjct: 1242 SGQPGEAGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQ 1301

Query: 208  DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM------------------TGPRGN 249
             G PG  G +G PG  G  G  G+PG  G  GEKG                    GP G 
Sbjct: 1302 PGSPGPTGENGPPGPLGKRGPAGMPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGK 1361

Query: 250  RGKSGINGVPGT 261
             G  G+ G+PG+
Sbjct: 1362 PGPDGLRGLPGS 1373


>gi|354488849|ref|XP_003506578.1| PREDICTED: collagen alpha-1(XXII) chain-like [Cricetulus griseus]
          Length = 1595

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 88/178 (49%), Gaps = 21/178 (11%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------- 164
            PGL G  G +G  G KG  G  G  G +G PG  GPPG +G PG +G  GP G       
Sbjct: 1232 PGLSGAEGARGPQGFKGHTGDPGPPGLRGEPGTTGPPGREGSPGKDGDTGPAGLQGPRGP 1291

Query: 165  -----DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
                   G PG  G PG  G  GPKG+ G       +G  GLPG  G  G PG  G  G 
Sbjct: 1292 RGPPGSSGSPGSAGDPGHPGAPGPKGNKGE------NGSPGLPGFLGPRGPPGEAGEIGA 1345

Query: 220  PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
            PGK+G PGK   PG  G+ GE+G  G +G++G  G  G PG P I  +K  +  + P 
Sbjct: 1346 PGKEGAPGK---PGEPGSKGERGDPGTKGDKGFPGGKGQPGDPGIPGHKGHTGLMGPQ 1400



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 82/163 (50%), Gaps = 34/163 (20%)

Query: 117 PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK----RGPKGDMG----- 167
           P G+KGE G  G MG+ G++G+ G+ G++G PGP+G  GD G+    RG KG+ G     
Sbjct: 486 PAGEKGERGFAGPMGLPGQKGDSGSIGLMGAPGPKGEKGDPGRGPFIRGEKGEKGSLGPP 545

Query: 168 ----YPGPQGIPGDEGKRGPKGDMGYPGRIGLD---------------GRDGLPGEPGLD 208
                 G +GI G+ G+    G+ G PG +G+                G  GL GE G  
Sbjct: 546 GPPGRDGSKGIRGEPGEL---GEPGLPGEVGMRGLQGPPGLPGPAGHVGAPGLQGEQGER 602

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
           G PG  G  G+   DG PGK G  G  G  G  G+TG RG +G
Sbjct: 603 GAPGEKGQQGL---DGFPGKPGKTGEQGRPGPPGVTGSRGEKG 642



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 90/198 (45%), Gaps = 52/198 (26%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PGLQG  G++G  G KG+ G+ G  G+ G  G  G PGP   PG  G RG KGD+     
Sbjct: 593 PGLQGEQGERGAPGEKGQQGLDGFPGKPGKTGEQGRPGP---PGVTGSRGEKGDVGPAGP 649

Query: 167 -----------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------- 199
                      G  G QG+PG  G +G  G  G PG IG +GRD                
Sbjct: 650 PGVPGSVVQREGLKGEQGVPGLRGHQGLPGPPGAPGLIGPEGRDGPPGPQGLRGPPGPPG 709

Query: 200 -----------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
                            G PG+PG  G  G  G DG+ G  GLPG  G PG  G +G  G
Sbjct: 710 VQGPPGPGGSPGLPGELGFPGKPGPSGHVGPPGKDGLRGPPGLPGSKGEPGDPGESGVPG 769

Query: 243 MTGPRGNRGKSGINGVPG 260
           + GPRG  G+ G+ G+PG
Sbjct: 770 IPGPRGEVGEQGLAGLPG 787



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 93/216 (43%), Gaps = 69/216 (31%)

Query: 114  LQGPIGQKGEIGAKGEMGVKGERGEKGA------------------PGVVGPPG---PQG 152
            + GP G +G+ GA+GE+G KG++G  G                    G  GPPG   PQG
Sbjct: 1132 IAGPQGNQGDRGAEGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGKAGPAGPPGLKGPQG 1191

Query: 153  ---------------IPGDEGKRG------PKGDMGYPGPQGIPGDEGKRGP---KGDMG 188
                           IPG+EGK+G      P G+ G  G  G+ G EG RGP   KG  G
Sbjct: 1192 KEGPPGPQGPSGIPGIPGEEGKQGRNGKPGPPGEPGKAGDPGLSGAEGARGPQGFKGHTG 1251

Query: 189  YPGRIGLDGRDGLPGEPGLDGIPGRNG------------------------MDGIPGKDG 224
             PG  GL G  G  G PG +G PG++G                          G PG  G
Sbjct: 1252 DPGPPGLRGEPGTTGPPGREGSPGKDGDTGPAGLQGPRGPRGPPGSSGSPGSAGDPGHPG 1311

Query: 225  LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
             PG  G  G NG+ G  G  GPRG  G++G  G PG
Sbjct: 1312 APGPKGNKGENGSPGLPGFLGPRGPPGEAGEIGAPG 1347



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 75/156 (48%), Gaps = 25/156 (16%)

Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK----RGPKGDMG---- 188
           GEKG  G     GP G+PG +G  G  G MG PGP+G  GD G+    RG KG+ G    
Sbjct: 488 GEKGERGFA---GPMGLPGQKGDSGSIGLMGAPGPKGEKGDPGRGPFIRGEKGEKGSLGP 544

Query: 189 --YPGRIGLDGRDGLPGEPGLDGIPGRNGM------------DGIPGKDGLPGKDGIPGT 234
              PGR G  G  G PGE G  G+PG  GM             G  G  GL G+ G  G 
Sbjct: 545 PGPPGRDGSKGIRGEPGELGEPGLPGEVGMRGLQGPPGLPGPAGHVGAPGLQGEQGERGA 604

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            G  G++G+ G  G  GK+G  G PG P +   + E
Sbjct: 605 PGEKGQQGLDGFPGKPGKTGEQGRPGPPGVTGSRGE 640



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 6/101 (5%)

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
           ++G+PG+ G  G  G PG+ GL G PG  G  G PG  G  G  GIPG  G  GE+G+ G
Sbjct: 725 ELGFPGKPGPSGHVGPPGKDGLRGPPGLPGSKGEPGDPGESGVPGIPGPRGEVGEQGLAG 784

Query: 246 PRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP 286
             G +G+ G+ G PG P +   K +        E  +L +P
Sbjct: 785 LPGKKGEVGLPGAPGFPGVHGEKGD------QGEKGELGLP 819



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 64/134 (47%), Gaps = 31/134 (23%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
           L   +G      E   PG+ GP   +GE+G +G  G+ G++GE G PG  G PG  G  G
Sbjct: 752 LPGSKGEPGDPGESGVPGIPGP---RGEVGEQGLAGLPGKKGEVGLPGAPGFPGVHGEKG 808

Query: 156 DEGKRGPKGDMGYPGPQGIPGDE-------------------------GKRGPKGDMGYP 190
           D+G+   KG++G PG +G  G++                         G++GPKG+ G P
Sbjct: 809 DQGE---KGELGLPGLKGAQGEKGEAGPAGPPGLPGSPSMFTPHPRMPGEQGPKGEKGDP 865

Query: 191 GRIGLDGRDGLPGE 204
           G  G  G  G PGE
Sbjct: 866 GDPGALGPQGHPGE 879


>gi|114645049|ref|XP_001161825.1| PREDICTED: collagen alpha-1(II) chain isoform 5 [Pan troglodytes]
          Length = 1418

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 746 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 805

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 806 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 865

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 866 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 916

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 917 PGQRGERGFPGLPG 930



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 87/187 (46%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------------ 163
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +            
Sbjct: 378 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 437

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
           G+ G PG +G PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 438 GERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 497

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G NGE G  G +G  G  
Sbjct: 498 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAP 557

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 558 GLRGLPG 564



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 732 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 791

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 851

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 852 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 911

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 912 GIVGLPG 918



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 88/209 (42%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 306 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 365

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 366 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 425

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G+PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 426 GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 482

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 483 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 511



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 619 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 678

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 738

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 739 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 789

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 790 DAGAPGPQGPSGAPG 804



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 681 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 734

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 735 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 791

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 834



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 645 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 694

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 695 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 752

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 753 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 807



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 453 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 512

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 513 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA---GEKGLPGAPGLRGLPGKDGET 569

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 570 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 629

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 630 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 665



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 81/178 (45%), Gaps = 51/178 (28%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G     
Sbjct: 858  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQ---- 910

Query: 182  GPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN---------------------GMD 217
              +G +G PG+ G  G  GLPG   EPG  G PG +                     G +
Sbjct: 911  --RGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGRE 968

Query: 218  GIPGKDGLPGKDGIPGTNGTNGE------------------KGMTGPRGNRGKSGING 257
            G PG DG PG+DG  G  G  GE                   G TG +G+RG++G  G
Sbjct: 969  GSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQG 1026



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 77/193 (39%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 305 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 358

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 359 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 418

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 419 EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 478

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 479 PGRPGEPGLPGAR 491



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 618 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 677

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 678 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 737

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 738 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 785



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 67/140 (47%), Gaps = 30/140 (21%)

Query: 151 QGIPGDEGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--------- 198
           QG+PG+ G     GP+G+ G+PG +G PG +G +GP+G  G PG  G  G          
Sbjct: 614 QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA 673

Query: 199 ------DGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPG---------TNGTNGE 240
                  G+PGE G  GI G  G     G  G +G PGKDG  G           G NGE
Sbjct: 674 QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGE 733

Query: 241 KGMTGPRGNRGKSGINGVPG 260
           KG  GP G  G +G  G PG
Sbjct: 734 KGEVGPPGPAGSAGARGAPG 753



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 215 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGA 274

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 275 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 334

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 335 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 391

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 392 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 422



 Score = 43.1 bits (100), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 173 GIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG  G+RGP   +G  G+PG  GL G  G  G PGLDG  G  G  G+ G+ G PG++
Sbjct: 189 GKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN 248

Query: 230 GIPGTNGTNG 239
           G PG  G  G
Sbjct: 249 GSPGPMGPRG 258


>gi|24581820|ref|NP_723044.1| collagen type IV, isoform A [Drosophila melanogaster]
 gi|24581822|ref|NP_723045.1| collagen type IV, isoform B [Drosophila melanogaster]
 gi|24581824|ref|NP_723046.1| collagen type IV, isoform C [Drosophila melanogaster]
 gi|161788954|sp|P08120.3|CO4A1_DROME RecName: Full=Collagen alpha-1(IV) chain; Flags: Precursor
 gi|7296931|gb|AAF52204.1| collagen type IV, isoform A [Drosophila melanogaster]
 gi|22945625|gb|AAN10519.1| collagen type IV, isoform B [Drosophila melanogaster]
 gi|22945626|gb|AAN10520.1| collagen type IV, isoform C [Drosophila melanogaster]
          Length = 1779

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/181 (40%), Positives = 98/181 (54%), Gaps = 17/181 (9%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQ-------KGEIGAKGEMGVKGERGEKGAPGVVGPPG 149
            V +QGF  +       G++G  G        +G+ G++GE G  GE+GE+G  G+ GP G
Sbjct: 1194 VGLQGFTGAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAG 1253

Query: 150  PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---- 205
              G  GD G +GP G  G     GIPG +G  GP+G++GYPG + + G  GLPG P    
Sbjct: 1254 VAGAKGDRGLQGPPGASGL---NGIPGAKGDIGPRGEIGYPG-VTIKGEKGLPGRPGRNG 1309

Query: 206  --GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
              GL G PG  G  G+PG  G PG  G+PG  G  G KG  G  G+ G+ G +G PG P 
Sbjct: 1310 RQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPG 1369

Query: 264  I 264
            +
Sbjct: 1370 L 1370



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 122/273 (44%), Gaps = 64/273 (23%)

Query: 86  VWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGE---------- 135
              + Y  IP  +++G          PG  G  G KG+ G+ G  G KGE          
Sbjct: 707 AGRDGYPGIPGQSIKGE---------PGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIK 757

Query: 136 ---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG---PKGDMGY 189
              +G KG PG  G PGP G  G  G+RG  G  G  GPQG PG EG RG   P+G+ G 
Sbjct: 758 MPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGN 817

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL--PGKDGIPGTNGTNGEKGMTGPR 247
            G +G+ G    PG+ GL GIPGRNG  G  G+ G+  PG  G PG NG  GEKG  GP 
Sbjct: 818 QGAVGVPGN---PGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPT 874

Query: 248 ---------------GNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGS 292
                          G+RG +G+ GV G P I   K +   + P    + +  PP + G 
Sbjct: 875 GPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGP----AGVAGPPGVPGI 930

Query: 293 EHIFSSSPIVVREGDNVRLRCVATGHP-KPSII 324
                         D VR R  A G P  P ++
Sbjct: 931 --------------DGVRGRDGAKGEPGSPGLV 949



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 93/176 (52%), Gaps = 24/176 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
           PG +G  G+ G  G KG+MG+KG+ G K +    GP G +G      IPG +G RGP G+
Sbjct: 542 PGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGE 601

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP---------------GLDGI 210
            GYPG +G  G  G+ GP G+ G  GR GL G  G PG+P               G  G 
Sbjct: 602 RGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGA 661

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR---GKSGINGVPGTPA 263
           PG  G+ G  G +GLPG  G  G  G  GEKG++G  GN    G++G +G PG P 
Sbjct: 662 PGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPG 717



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 86/164 (52%), Gaps = 24/164 (14%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGD 165
            PG  GP G KGE G  G  G  G+ G  GAPG+ G  GPQG  G+      EG++G KGD
Sbjct: 1338 PGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGD 1397

Query: 166  MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
             G  GP G+PG  G+   KGD GYPG  G DG  G PGE G  G  GR+G DG P   GL
Sbjct: 1398 RGLQGPSGLPGLVGQ---KGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTP---GL 1451

Query: 226  PGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGING 257
            PG+ G PG              G NG KG  G  G RG  GI G
Sbjct: 1452 PGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQG 1495



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 92/180 (51%), Gaps = 26/180 (14%)

Query: 118  IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKGDMGYPG---- 170
             G+KGE G +G  G  G  G KG  G+ GPPG  G   IPG +G  GP+G++GYPG    
Sbjct: 1237 TGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIK 1296

Query: 171  -PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG----------------- 212
              +G+PG  G+ G +G +G PG IG  G  GL GEPGL G+PG                 
Sbjct: 1297 GEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSP 1356

Query: 213  -RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
             + G DG PG  GL G  G  G  G  G  G  G +G++G  G+ G  G P +   K ++
Sbjct: 1357 GQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDT 1416



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 87/169 (51%), Gaps = 30/169 (17%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
            G++G  G KGE G+ G +G+ G +G++GAPG  GP G  G+ G  GKRGP G        
Sbjct: 932  GVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAG-------- 983

Query: 173  GIPGDEGKRGPKGDMGYPGR---------------IGLDGRDGL---PGEPGLDGIPGRN 214
             IPG  G +G KG  G  G                +G+ G  GL   PG+ GLDG+PG  
Sbjct: 984  -IPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEK 1042

Query: 215  GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
            G  G PG DG P   G+PG     G+KG  GP G RG +G  G PG P 
Sbjct: 1043 GNQGFPGLDGPP---GLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPG 1088



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 81/148 (54%), Gaps = 12/148 (8%)

Query: 111  PPGLQGPIGQKGE---------IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
            PPGL G  G+KG+          GA G +G  G+RG+ G PGV G PG  G  GD G  G
Sbjct: 858  PPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIG 917

Query: 162  PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
            P G  G PG  GI G  G+ G KG+ G PG +G+ G  G  G PG DG  G  G+ G PG
Sbjct: 918  PAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPG 977

Query: 222  KDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
            K    G  GIPG +G  G+KG TG  GN
Sbjct: 978  KR---GPAGIPGVSGAKGDKGATGLTGN 1002



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
            PG  G  G++G IGA G +G +G  G  G PG+VG PGP G  G +G+RG  G  G PG 
Sbjct: 1302 PGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQ 1361

Query: 172  QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGK 228
             G PG  G +G  G  G+ G  GL+G +G  G+ G  G+ G +G+ G+ G+    G PG 
Sbjct: 1362 DGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGL 1421

Query: 229  DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            +G  G  G  GE+G TGP+G  G+ G  G+PG
Sbjct: 1422 NGNDGPVGAPGERGFTGPKGRDGRDGTPGLPG 1453



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 89/188 (47%), Gaps = 13/188 (6%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGY 168
           PG++GP G KG+ G  G  G +G++GE+G+PG+    G PG QG  G+ G  G  G  G 
Sbjct: 109 PGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGC 168

Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
            G  GIPG EG  G  G  GY G++G  G  G P +   D   G  G  G  G  GL G 
Sbjct: 169 DGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGP 228

Query: 229 DGIPGTNGTNGEKG---MTGPRGNRGKSGINGV-------PGTPAICAYKRESCSLLPNS 278
            G PG  G  G+ G     GPRG  G  G  G        PG P I   K E  S  P  
Sbjct: 229 QGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVK 288

Query: 279 ETSQLLIP 286
            T  ++ P
Sbjct: 289 PTHTVMGP 296



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 95/190 (50%), Gaps = 40/190 (21%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
           G+ GP G  G++G+KGE G          KGE+GE G  G  G  GPQG PG++G+RG  
Sbjct: 182 GMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDS 241

Query: 164 GDMGYPGPQGIPGDEGKRGPK--GDMGYPGRIGLDGRDGLP------------------- 202
           G  G  GP+G  G +G++G    G M  PG  G+ G  G P                   
Sbjct: 242 GPYGAKGPRGEHGLKGEKGASCYGPM-KPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDM 300

Query: 203 ---GEPGL---DGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
              GEPGL    G PG     G+DG  G+ GLPG  G  G  G  G  G TG +G+RG+ 
Sbjct: 301 GQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEP 360

Query: 254 GINGVPGTPA 263
           G+NG+PG P 
Sbjct: 361 GLNGLPGNPG 370



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 82/169 (48%), Gaps = 30/169 (17%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPKGDMGYPGPQGIP 175
           G  G  G  G  G++G+ G PG  G  G  GI GD G +      GPKGD G  G  GIP
Sbjct: 531 GRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIP 590

Query: 176 GDEGKRGPKGDMGYPGRIGLD---GRDGLPGEPGLDGIPGRNGMDGIPGK---------- 222
           G +G RGP G+ GYPG  G D   G+ G PGE G DG  G  G  G PGK          
Sbjct: 591 GKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIE 650

Query: 223 --------DGLPGKDGIPGTNGTNGEKGMTGPRGN---RGKSGINGVPG 260
                    G PG  G+ G  G  G  G+ GP+G    +G+ G++G PG
Sbjct: 651 PLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPG 699



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 104/234 (44%), Gaps = 65/234 (27%)

Query: 93  RIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM------------GVKGERGEKG 140
           ++P    +G    T    PPG  G  G++G  G KG              G+ G RGEKG
Sbjct: 757 KMPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKG 816

Query: 141 APGVVGPPGP------QGIPGDEGKRGPKGD--------MGYPGPQGIPGDEGKRGPKGD 186
             G VG PG       +GIPG  G+ GP+G+        MG PG  G+ G++G RGP G 
Sbjct: 817 NQGAVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGP 876

Query: 187 MGYPGR---------------IGLDGRDGL------------------PGEPGLDGIPGR 213
           +G+PG                 G+ GR G+                  PG PG+DG+ GR
Sbjct: 877 IGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGR 936

Query: 214 NGMDGIPGKDGL------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           +G  G PG  GL       G  G PG +G  G  G+TG  G RG +GI GV G 
Sbjct: 937 DGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGA 990



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 82/165 (49%), Gaps = 37/165 (22%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PGL   +G+KGE G +G+ G+ G++GEKG PG  G  G QG  G  G  G KGD G PG 
Sbjct: 306 PGL---VGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGL 362

Query: 172 QGIPGDEGKRGPKGD----------------------------------MGYPGRIGLDG 197
            G+PG+ G++G  G                                   +G PG  GL+G
Sbjct: 363 NGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPGPQGLNG 422

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
            DGLPG  G +G  G  G+ G PG +G PGK G  GT G NG KG
Sbjct: 423 VDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKG 467



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 87/178 (48%), Gaps = 9/178 (5%)

Query: 95  PLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
           PL   +G+  +       G +G  G  G  G KGE G KGE+G  GAPG  G PG  G  
Sbjct: 651 PLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRD 710

Query: 155 GDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD-------GRDGLPGEP 205
           G  G  G   KG+ G+ G  G  GD+G  G  G+ G PG   LD       G  G PG+ 
Sbjct: 711 GYPGIPGQSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQT 770

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G+ G PG +G  G  G  GL G  G  G  G  G +G+ GPRG +G  G  GVPG P 
Sbjct: 771 GMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPG 828



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 95/168 (56%), Gaps = 20/168 (11%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---------PQGIPGDEGKRG-- 161
            G++G  G  G  G +G  G+ GE+G +G PG+ GPPG          +G PG  G RG  
Sbjct: 1019 GIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLPGDASEKGQKGEPGPSGLRGDT 1078

Query: 162  -PKGDMGYPGPQGIPG--DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------PG 212
             P G  G+PG +G+PG    G+ GP G+ G  GR G+DGRDG+ GE G  G+      PG
Sbjct: 1079 GPAGTPGWPGEKGLPGLAVHGRAGPPGEKGDQGRSGIDGRDGINGEKGEQGLQGVWGQPG 1138

Query: 213  RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
              G  G PG  G PG DG+PG  G  G  G  G RG++G+ G++G+PG
Sbjct: 1139 EKGSVGAPGIPGAPGMDGLPGAAGAPGAVGYPGDRGDKGEPGLSGLPG 1186



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 93/198 (46%), Gaps = 50/198 (25%)

Query: 119 GQKGEIGAKGEMGVK---------GERGEKGAPGVVG------PPGPQGIPGDE------ 157
           GQKG++G KG++G K         G++G  G PG+ G      PPG +G PG+       
Sbjct: 555 GQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGIN 614

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGP------------KGDMGYPGRIGLDGRDGLPGEP 205
           G+ GP G+ G  G  G+PG  G+ G             KGD GYPG  G  G  G  G  
Sbjct: 615 GQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAE 674

Query: 206 GLDGIP---------GRNGMDGIPGKDGLP---GKDGIPGTNGTN-----GEKGMTGPRG 248
           GL GIP         G  G+ G PG DG P   G+DG PG  G +     G  G  G +G
Sbjct: 675 GLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKG 734

Query: 249 NRGKSGINGVPGTPAICA 266
           ++G  G +G  G P  CA
Sbjct: 735 DKGSFGRSGEKGEPGSCA 752



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 93/196 (47%), Gaps = 18/196 (9%)

Query: 101  GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
            GF  +      PG +G  G  G  G  G +G KG+ G  G  GV GPPG  GI G  G+ 
Sbjct: 878  GFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRD 937

Query: 161  GPKGDMGYPGPQGIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
            G KG+ G PG  G+PG++G RG  G+    G+ G  G  G+ G  G PG+ G  G  G  
Sbjct: 938  GAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGAT 997

Query: 218  GIPGKD---------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
            G+ G D               G+ G  G+ G  G  G  GM G +GN+G  G++G PG P
Sbjct: 998  GLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLDGPPGLP 1057

Query: 263  AICAYKRESCSLLPNS 278
               + K +     P+ 
Sbjct: 1058 GDASEKGQKGEPGPSG 1073



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 12/119 (10%)

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGLPGE 204
           +G+PG  G  G KG+MG+PG +G  GD+G++      G +GD G  G  GL G+ G+   
Sbjct: 91  RGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGV--- 147

Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           PG+ G  G  G  GI GKDG  G+DGIPG  G +   GM GPRG  G+ G  G  G PA
Sbjct: 148 PGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLS---GMPGPRGYAGQLGSKGEKGEPA 203



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 77/173 (44%), Gaps = 34/173 (19%)

Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
           MG +G+ G+KG PG+VG  G  G  GD G  G KG+ G PG  G  G +G  GP G  G 
Sbjct: 294 MGPRGDMGQKGEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQ 353

Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMD-------------------------------G 218
            G  G  G +GLPG PG  G PGR G                                 G
Sbjct: 354 KGDRGEPGLNGLPGNPGQKGEPGRAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVG 413

Query: 219 IPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPAICAYK 268
            PG  GL G DG+PG  G NG+K   G+ G  GN G  G  G  GT  +   K
Sbjct: 414 APGPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPK 466



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 94/196 (47%), Gaps = 38/196 (19%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGPPG 149
           + G C+S    C  G +G  G  G  G  G+ G +G  GE+G P         G  GPPG
Sbjct: 566 VGGKCSS----CRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPG 621

Query: 150 PQ------GIPGDEGKRGP------------KGDMGYPGPQGIPGDEGKRGPKGDMGYP- 190
            +      G+PG  G+ G             KGD GYPG  G  G +G +G +G  G P 
Sbjct: 622 EKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPG 681

Query: 191 --GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
             G  G  G  GL G PG DG PGR G DG P   G+PG+  I G  G +G  G  G +G
Sbjct: 682 PKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYP---GIPGQS-IKGEPGFHGRDGAKGDKG 737

Query: 249 NRGKSGINGVPGTPAI 264
           + G+SG  G PG+ A+
Sbjct: 738 SFGRSGEKGEPGSCAL 753



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 98/223 (43%), Gaps = 56/223 (25%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-P------ 150
             ++G   +  E   PGL G  G KG+ GA G  G KG  G  GAPG  GP G P      
Sbjct: 932  GVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAK 991

Query: 151  --------------------------QGIPGDEGKRGP------------KGDMGYP--- 169
                                       GI GD+G  G             KG+ G+P   
Sbjct: 992  GDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGLD 1051

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR--NGMDGIPGKDGLPG 227
            GP G+PGD  ++G KG+ G  G  G  G  G PG PG  G+PG   +G  G PG+ G  G
Sbjct: 1052 GPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKGDQG 1111

Query: 228  KDGIPGTNGTNGEKGMTGPR------GNRGKSGINGVPGTPAI 264
            + GI G +G NGEKG  G +      G +G  G  G+PG P +
Sbjct: 1112 RSGIDGRDGINGEKGEQGLQGVWGQPGEKGSVGAPGIPGAPGM 1154



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 103/237 (43%), Gaps = 46/237 (19%)

Query: 113  GLQGPIGQKGEIGAK---GEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKR--- 160
            G  GP G+KG+ G     G  G+ GE+GE+G  GV G PG +      GIPG  G     
Sbjct: 1099 GRAGPPGEKGDQGRSGIDGRDGINGEKGEQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLP 1158

Query: 161  ------------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
                        G +GD G PG  G+PG +G+ GP G  G+ G  G  G  G+ G+PGL 
Sbjct: 1159 GAAGAPGAVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGIRGQPGLP 1218

Query: 209  -------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
                   G  G  G  G  G+ G  G+ G+ G  G  G KG  G +G  G SG+NG+PG 
Sbjct: 1219 ATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGA 1278

Query: 262  ------------PAICAYKRESCSLLPNSETSQLLI-PPTIVGSEHI--FSSSPIVV 303
                        P +     +     P     Q LI  P ++G   +   +  P +V
Sbjct: 1279 KGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLV 1335



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 73/186 (39%), Gaps = 54/186 (29%)

Query: 98   AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             + GF     +    GLQGP G  G +G KG+ G          PG+ G  GP G PG+ 
Sbjct: 1384 GLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGY---------PGLNGNDGPVGAPGER 1434

Query: 158  GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG----- 212
            G  GPK                              G DGRDG PG PG  G PG     
Sbjct: 1435 GFTGPK------------------------------GRDGRDGTPGLPGQKGEPGMLPPP 1464

Query: 213  ----------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
                      RNG  G PG+ G  G  GI G  G  GE+G+ G  GN G+ G  G  G P
Sbjct: 1465 GPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGERGLIGETGNVGRPGPKGDRGEP 1524

Query: 263  AICAYK 268
                Y+
Sbjct: 1525 GERGYE 1530



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 83/180 (46%), Gaps = 42/180 (23%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ------ 172
           G +G  G  G  G +G  G+KG  G+ G PG +G PG   K+G KG  G  GP+      
Sbjct: 416 GPQGLNGVDGLPGPQGYNGQKGGAGLPGRPGNEGPPG---KKGEKGTAGLNGPKGSIGPI 472

Query: 173 ---------------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--G 215
                          G+PG  G +G KGD G PG  GL G  G  G  G  G PG +  G
Sbjct: 473 GHPGPPGPEGQKGDAGLPG-YGIQGSKGDAGIPGYPGLKGSKGERGFKGNAGAPGDSKLG 531

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKG---------------MTGPRGNRGKSGINGVPG 260
             G PG  G PG+ G  G  GT G+KG                 GP+G++G SG+ G+PG
Sbjct: 532 RPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPG 591


>gi|405951824|gb|EKC19703.1| Collagen alpha-2(I) chain [Crassostrea gigas]
          Length = 1321

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/134 (47%), Positives = 79/134 (58%), Gaps = 3/134 (2%)

Query: 131 GVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
           GVKGE G++G   APG  GP G  GIPG +G+RG +G +G PG  G  G +G +G  G  
Sbjct: 697 GVKGETGDRGISGAPGNRGPSGADGIPGRKGERGDRGILGIPGQPGPTGRDGPQGFPGKS 756

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
           G PG  G  G+DG+ G  G  G PG  G +G+PG  G PG+ G  G +G  G  G  GP 
Sbjct: 757 GSPGSQGTPGQDGITGMRGEPGSPGPRGQEGMPGNPGQPGQKGARGEDGAEGPTGPVGPL 816

Query: 248 GNRGKSGINGVPGT 261
           GN G+ G+ G PGT
Sbjct: 817 GNSGEVGLPGDPGT 830



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 89/174 (51%), Gaps = 24/174 (13%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------IPGDEGKRGPKGD 165
           PG  GP GQ+G  G  G+ G KG RGE GA G  GP GP G      +PGD G RG +G 
Sbjct: 777 PGSPGPRGQEGMPGNPGQPGQKGARGEDGAEGPTGPVGPLGNSGEVGLPGDPGTRGERGP 836

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD---------GRDGLPGEPGLDGIPG---R 213
           MG  G  G+PG+ GK    G  G PG+ G           G  G PG PG DG PG   R
Sbjct: 837 MGPAGAVGLPGEAGK---SGSDGAPGKQGPQGPPGNPGSVGNVGSPGNPGPDGAPGITGR 893

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGTPAI 264
            G  G  G+ G  G  G+PG  G  G  G TGP   RG RG+ G +G PG P +
Sbjct: 894 TGEKGPAGEMGQSGPSGLPGFAGPPGVTGATGPSGERGLRGEKGPSGAPGAPGV 947



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 86/179 (48%), Gaps = 33/179 (18%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG+ GP G+ G  G KG  G++G+RGE G PG  G  G  G+ G  G  G KG  G PGP
Sbjct: 276 PGIPGPKGEAGAPGPKGSAGLQGQRGESGVPGPQGDEGALGMDGMPGASGEKGSSGDPGP 335

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP----- 226
            G+PG  G RGP+G  G PG  G  G  G PG+PG  G  G  GM G  G  G P     
Sbjct: 336 AGVPGFPGTRGPQGIPGSPGLQGSKGASGQPGQPGYKGERGPRGMSGSSGDRGHPGHPGQ 395

Query: 227 -------------------------GKDGIPGT---NGTNGEKGMTGPRGNRGKSGING 257
                                    G+ G+PG     G+ GE+G  G RG RG+SG NG
Sbjct: 396 EGKRGLRGSIGDPGPQGPPGDRGSMGERGLPGNVGDPGSPGEEGEPGARGRRGESGPNG 454



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 89/179 (49%), Gaps = 18/179 (10%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QGF   +     PG QG  GQ G  G +GE G  G RG++G PG  G PG +G  G++G 
Sbjct: 750 QGFPGKSGS---PGSQGTPGQDGITGMRGEPGSPGPRGQEGMPGNPGQPGQKGARGEDGA 806

Query: 160 RGPKGD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
            GP G    +G  G  G+PGD G RG +G MG  G +GL G  G   + G DG PG+ G 
Sbjct: 807 EGPTGPVGPLGNSGEVGLPGDPGTRGERGPMGPAGAVGLPGEAG---KSGSDGAPGKQGP 863

Query: 217 D---------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
                     G  G  G PG DG PG  G  GEKG  G  G  G SG+ G  G P +  
Sbjct: 864 QGPPGNPGSVGNVGSPGNPGPDGAPGITGRTGEKGPAGEMGQSGPSGLPGFAGPPGVTG 922



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 72/139 (51%)

Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
           G  G++G  G  G +G+PG+ G PGP+G  G  G +G  G  G  G  G+PG +G  G  
Sbjct: 256 GLPGQVGPPGVIGNQGSPGIPGIPGPKGEAGAPGPKGSAGLQGQRGESGVPGPQGDEGAL 315

Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
           G  G PG  G  G  G PG  G+ G PG  G  GIPG  GL G  G  G  G  G KG  
Sbjct: 316 GMDGMPGASGEKGSSGDPGPAGVPGFPGTRGPQGIPGSPGLQGSKGASGQPGQPGYKGER 375

Query: 245 GPRGNRGKSGINGVPGTPA 263
           GPRG  G SG  G PG P 
Sbjct: 376 GPRGMSGSSGDRGHPGHPG 394



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 87/178 (48%), Gaps = 24/178 (13%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP------Q 151
            + G      E    G+ G  G +G  GA G  G KGERG++G  G+ G PGP      Q
Sbjct: 691 GLNGLSGVKGETGDRGISGAPGNRGPSGADGIPGRKGERGDRGILGIPGQPGPTGRDGPQ 750

Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
           G PG  G          PG QG PG +G  G +G+ G PG  G +G  G PG+PG  G  
Sbjct: 751 GFPGKSGS---------PGSQGTPGQDGITGMRGEPGSPGPRGQEGMPGNPGQPGQKGAR 801

Query: 212 GRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPR------GNRGKSGINGVPG 260
           G +G +G  G  G     G+ G+PG  GT GE+G  GP       G  GKSG +G PG
Sbjct: 802 GEDGAEGPTGPVGPLGNSGEVGLPGDPGTRGERGPMGPAGAVGLPGEAGKSGSDGAPG 859



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/167 (39%), Positives = 83/167 (49%), Gaps = 18/167 (10%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK------- 163
           P G  GP+G  GE+G  G+ G +GERG  G  G VG PG  G  G +G  G +       
Sbjct: 809 PTGPVGPLGNSGEVGLPGDPGTRGERGPMGPAGAVGLPGEAGKSGSDGAPGKQGPQGPPG 868

Query: 164 --------GDMGYPGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
                   G  G PGP G P   G  G++GP G+MG  G  GL G  G PG  G  G  G
Sbjct: 869 NPGSVGNVGSPGNPGPDGAPGITGRTGEKGPAGEMGQSGPSGLPGFAGPPGVTGATGPSG 928

Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
             G+ G  G  G PG  G+ G  G+NG +G +G +G+ G+ G  G P
Sbjct: 929 ERGLRGEKGPSGAPGAPGVRGPPGSNGIQGNSGEKGDNGEEGEKGDP 975



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 90/173 (52%), Gaps = 18/173 (10%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
            ++G   +  E  P GL    G+KG  GA G  G+ G +G +G  G+ GP G QG+PG++
Sbjct: 160 GLKGSDGNNGEVGPLGL---PGRKGPSGAPGMPGIPGMKGHRGLNGINGPSGEQGLPGEK 216

Query: 158 GKRGP---------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
           G  GP         +G  G PG +G  GD G  G  G  G PG++G  G  G  G PG+ 
Sbjct: 217 GSMGPPGPPGPPGLQGQRGIPGERGRDGDRGSNGLNGVDGLPGQVGPPGVIGNQGSPGIP 276

Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
           GIPG        G+ G PG  G  G  G  GE G+ GP+G+ G  G++G+PG 
Sbjct: 277 GIPGPK------GEAGAPGPKGSAGLQGQRGESGVPGPQGDEGALGMDGMPGA 323



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 79/166 (47%), Gaps = 30/166 (18%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGYPG 170
           LQG  G  GE G  G+ G  G  G  G PG VGPPG    QG PG  G  GPKG+ G PG
Sbjct: 230 LQGQRGIPGERGRDGDRGSNGLNGVDGLPGQVGPPGVIGNQGSPGIPGIPGPKGEAGAPG 289

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL----- 225
           P+G                    GL G+ G  G PG  G  G  GMDG+PG  G      
Sbjct: 290 PKGS------------------AGLQGQRGESGVPGPQGDEGALGMDGMPGASGEKGSSG 331

Query: 226 -PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
            PG  G+PG  GT G +G+ G  G +G  G +G PG P    YK E
Sbjct: 332 DPGPAGVPGFPGTRGPQGIPGSPGLQGSKGASGQPGQP---GYKGE 374



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 56/112 (50%)

Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
           +GI G  G RGP G  G PGR G  G  G+ G PG  G  GR+G  G PGK G PG  G 
Sbjct: 705 RGISGAPGNRGPSGADGIPGRKGERGDRGILGIPGQPGPTGRDGPQGFPGKSGSPGSQGT 764

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
           PG +G  G +G  G  G RG+ G+ G PG P     + E  +  P      L
Sbjct: 765 PGQDGITGMRGEPGSPGPRGQEGMPGNPGQPGQKGARGEDGAEGPTGPVGPL 816



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 93/178 (52%), Gaps = 18/178 (10%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           PPG +G  G  G  G  G +G+ G +G  GAPG+ G      IPG +G RG  G  G  G
Sbjct: 155 PPGNKGLKGSDGNNGEVGPLGLPGRKGPSGAPGMPG------IPGMKGHRGLNGINGPSG 208

Query: 171 PQGIPGDEGKRGPKGDMGYPGRIG---LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
            QG+PG+      KG MG PG  G   L G+ G+PGE G DG  G NG++G+   DGLPG
Sbjct: 209 EQGLPGE------KGSMGPPGPPGPPGLQGQRGIPGERGRDGDRGSNGLNGV---DGLPG 259

Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI 285
           + G PG  G  G  G+ G  G +G++G  G  G+  +   + ES    P  +   L +
Sbjct: 260 QVGPPGVIGNQGSPGIPGIPGPKGEAGAPGPKGSAGLQGQRGESGVPGPQGDEGALGM 317



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 85/209 (40%), Gaps = 48/209 (22%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGER------------GEKGAPGV 144
            V + G   +  E  P G  G +G  GE G  G  G  G++            G  G+PG 
Sbjct: 822  VGLPGDPGTRGERGPMGPAGAVGLPGEAGKSGSDGAPGKQGPQGPPGNPGSVGNVGSPGN 881

Query: 145  VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
             GP G  GI G  G++GP G+MG  GP G+PG  G        G  G  G  G  GL GE
Sbjct: 882  PGPDGAPGITGRTGEKGPAGEMGQSGPSGLPGFAGP------PGVTGATGPSGERGLRGE 935

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG---------------------- 242
             G  G PG  G+ G PG +G+ G  G  G NG  GEKG                      
Sbjct: 936  KGPSGAPGAPGVRGPPGSNGIQGNSGEKGDNGEEGEKGDPGLMGLNGLLGPEGPPGEPGP 995

Query: 243  --------MTGPRGNRGKSGINGVPGTPA 263
                      GP G RG+ G  G PG P 
Sbjct: 996  MGPPGPLGQAGPTGRRGRPGEEGQPGAPG 1024



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 69/161 (42%), Gaps = 39/161 (24%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
             +QG    +    P G +G +G  G  GA GE G  G+ G  G PG  G  GPQGIPG 
Sbjct: 294 AGLQGQRGESGVPGPQGDEGALGMDGMPGASGEKGSSGDPGPAGVPGFPGTRGPQGIPGS 353

Query: 157 EGKRGPKGDMGYPG---------PQGI------------PGDEGKRGPKG---------- 185
            G +G KG  G PG         P+G+            PG EGKRG +G          
Sbjct: 354 PGLQGSKGASGQPGQPGYKGERGPRGMSGSSGDRGHPGHPGQEGKRGLRGSIGDPGPQGP 413

Query: 186 --------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
                   + G PG +G  G  G  GEPG  G  G +G +G
Sbjct: 414 PGDRGSMGERGLPGNVGDPGSPGEEGEPGARGRRGESGPNG 454



 Score = 46.6 bits (109), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 69/162 (42%), Gaps = 42/162 (25%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGDMGY 168
            PG  GP G  G  G  GE G++GE+G  GAPG   V GPPG  GI G+ G++G       
Sbjct: 912  PGFAGPPGVTGATGPSGERGLRGEKGPSGAPGAPGVRGPPGSNGIQGNSGEKG------- 964

Query: 169  PGPQGIPGDEGKRGPKGD------------------------MGYPGRIGLDGRDGLPGE 204
                    D G+ G KGD                         G  G+ G  GR G PGE
Sbjct: 965  --------DNGEEGEKGDPGLMGLNGLLGPEGPPGEPGPMGPPGPLGQAGPTGRRGRPGE 1016

Query: 205  PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
             G  G PG  G  G  G  G  G+ G+ G  G  G  G+ GP
Sbjct: 1017 EGQPGAPGHQGPLGPRGSKGDSGRPGVMGEMGQPGSPGIPGP 1058



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 64/164 (39%), Gaps = 54/164 (32%)

Query: 97   VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEK------GAPGVVGPPGP 150
               +G      +  P GL G  G  G  GA G  G +G RGEK      GAPGV GPPG 
Sbjct: 894  TGEKGPAGEMGQSGPSGLPGFAGPPGVTGATGPSGERGLRGEKGPSGAPGAPGVRGPPGS 953

Query: 151  QGIPGDEGKR------------------------------------------GPKGDMGY 168
             GI G+ G++                                          GP G  G 
Sbjct: 954  NGIQGNSGEKGDNGEEGEKGDPGLMGLNGLLGPEGPPGEPGPMGPPGPLGQAGPTGRRGR 1013

Query: 169  PGPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPG 206
            PG +G PG  G +GP      KGD G PG +G  G+ G PG PG
Sbjct: 1014 PGEEGQPGAPGHQGPLGPRGSKGDSGRPGVMGEMGQPGSPGIPG 1057


>gi|214042|gb|AAA49678.1| alpha-1 type II collagen [Xenopus laevis]
          Length = 1486

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 87/190 (45%), Gaps = 48/190 (25%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
           GP+G KGE G  G  G KGE+G KG  G  GP G  G  G+EGKRG +G+ G  GP G P
Sbjct: 449 GPLGPKGETGDPGVAGFKGEQGPKGEIGSAGPQGAPGPAGEEGKRGARGEPGAAGPNGPP 508

Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------------PGLDGIPGRNGMD 217
           G+   RG  G+ G+PG+ GL G  G PGE                  PG  G+PG  G+ 
Sbjct: 509 GE---RGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGGNGDPGRPGEPGLPGARGLT 565

Query: 218 GIPGKDG---------------------------LPGKDGIPGTNGTNGEKGMTGPRGNR 250
           G PG  G                            PG  G PG  G NGE G  G +G  
Sbjct: 566 GRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLV 625

Query: 251 GKSGINGVPG 260
           G  G+ G+PG
Sbjct: 626 GAPGLRGLPG 635



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 86/181 (47%), Gaps = 36/181 (19%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           G  GP G  GE G  GE G+ G  G +G PG  G  G QG  G  G  G +G+ G PGP 
Sbjct: 605 GFPGPKGANGEPGKAGEKGLVGAPGLRGLPGKDGETGSQGPNGPAGPAGERGEQGPPGPS 664

Query: 172 --------------------QGIPGDEGKRG---PKGDMGYPGR------IGLDGRDGLP 202
                               QG+PG+ G  G   P+G+ G+PG        GL G  GLP
Sbjct: 665 GFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSSGPQGLQGPRGLP 724

Query: 203 GEPGLDGIPGR------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           G PG DG  G       NG  G PG  G+PG+ G  G +G  G++G TG +G  G SG +
Sbjct: 725 GTPGTDGPKGASGPSGPNGAQGPPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGASGKD 784

Query: 257 G 257
           G
Sbjct: 785 G 785



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 90/215 (41%), Gaps = 69/215 (32%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD--------- 156
           PG  G  G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG          
Sbjct: 370 PGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGASGNPGTDGIPGAKGSSGGPGI 429

Query: 157 ------------------------------------EGKRGPKGDMGYPGPQGIPGDEGK 180
                                               +G++GPKG++G  GPQG PG  G+
Sbjct: 430 AGAPGFPGPRGPPGPQGATGPLGPKGETGDPGVAGFKGEQGPKGEIGSAGPQGAPGPAGE 489

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM---DGIPGK--------------- 222
            G +G  G PG  G +G  G  G PG  G PG++G+    G PG+               
Sbjct: 490 EGKRGARGEPGAAGPNGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGGNGD 549

Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG+ G+PG  G  G  G  GP+G  G SG +G
Sbjct: 550 PGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASG 584



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 87/200 (43%), Gaps = 45/200 (22%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           QG         P G  GP G++G+ GA+GE G     G  G PG  G PG +G PG +G 
Sbjct: 469 QGPKGEIGSAGPQGAPGPAGEEGKRGARGEPGAA---GPNGPPGERGAPGNRGFPGQDGL 525

Query: 160 RGPKG------------------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD-- 199
            GPKG                  D G PG  G+PG  G  G  GD G  G++G  G    
Sbjct: 526 AGPKGAPGERGVPGLGGPKGGNGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGE 585

Query: 200 -------------------GLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGT 237
                              G PG  G +G PG+ G  G+   PG  GLPGKDG  G+ G 
Sbjct: 586 DGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLVGAPGLRGLPGKDGETGSQGP 645

Query: 238 NGEKGMTGPRGNRGKSGING 257
           NG  G  G RG +G  G +G
Sbjct: 646 NGPAGPAGERGEQGPPGPSG 665



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 82/179 (45%), Gaps = 24/179 (13%)

Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
           +GF        P GLQGP G  G  G  G  G  G  G  GA    GPPG QG+PG+ G 
Sbjct: 703 RGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGASGPSGPNGA---QGPPGLQGMPGERGA 759

Query: 160 ------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGR 198
                 +G +GD G  GP+G  G +G RG                KG+ G  G  G+ G 
Sbjct: 760 AGISGPKGDRGDTGEKGPEGASGKDGSRGLTGPIGPPGPAGPNGEKGESGPSGPPGIVGA 819

Query: 199 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
            G PG+ G +G PG  G  G PG DG  G  G  G +G  G+ G  GP+G  G  G  G
Sbjct: 820 RGAPGDRGENGPPGPAGFAGPPGADGQSGLKGDQGESGQKGDAGAPGPQGPSGAPGPQG 878



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 80/163 (49%), Gaps = 12/163 (7%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGDEG 158
           PPGLQG  G++G  G  G  G +G+ GEKG  G  G  G +G+             G++G
Sbjct: 747 PPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGASGKDGSRGLTGPIGPPGPAGPNGEKG 806

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           + GP G  G  G +G PGD G+ GP G  G+ G  G DG+ GL G+ G  G  G  G  G
Sbjct: 807 ESGPSGPPGIVGARGAPGDRGENGPPGPAGFAGPPGADGQSGLKGDQGESGQKGDAGAPG 866

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
             G  G PG  G  G  G  G +G  GP G  G  G  G  GT
Sbjct: 867 PQGPSGAPGPQGPTGVFGPKGARGAQGPAGATGFPGAAGRVGT 909



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 87/198 (43%), Gaps = 36/198 (18%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK------------------GERG 137
           L  + G    T    P G  GP G++GE G  G  G +                  G  G
Sbjct: 630 LRGLPGKDGETGSQGPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPG 689

Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
           E GAPG+VGP G +G PG+ G  GP+   G  GP+G+PG  G  GPKG  G  G  G  G
Sbjct: 690 EAGAPGLVGPRGERGFPGERGSSGPQ---GLQGPRGLPGTPGTDGPKGASGPSGPNGAQG 746

Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG---------------EKG 242
             GL G PG  G  G +G  G  G  G  G +G  G +G+ G               EKG
Sbjct: 747 PPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGASGKDGSRGLTGPIGPPGPAGPNGEKG 806

Query: 243 MTGPRGNRGKSGINGVPG 260
            +GP G  G  G  G PG
Sbjct: 807 ESGPSGPPGIVGARGAPG 824



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 91/208 (43%), Gaps = 51/208 (24%)

Query: 96   LVAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PG 149
            +V  +G      E  PPG     GP G  G+ G KG+ G  G++G+ GAPG  GP   PG
Sbjct: 816  IVGARGAPGDRGENGPPGPAGFAGPPGADGQSGLKGDQGESGQKGDAGAPGPQGPSGAPG 875

Query: 150  PQ------GIPGDEGKRGPKGDMGYPGPQG------------------IPGDEGKRGPKG 185
            PQ      G  G  G +GP G  G+PG  G                    G EG +G +G
Sbjct: 876  PQGPTGVFGPKGARGAQGPAGATGFPGAAGRVGTPGPNGNPGPPGPPGSAGKEGPKGVRG 935

Query: 186  DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------------GLPGKDGIPG 233
            D G PGR          G+PGL G  G  G  G PG+D            GL G+ GI G
Sbjct: 936  DAGPPGRA---------GDPGLQGAAGAPGEKGEPGEDGPSGPDGPPGPQGLSGQRGIVG 986

Query: 234  TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
              G  GE+G  G  G  G+ G  G PG+
Sbjct: 987  LPGQRGERGFPGLPGPSGEPGKQGGPGS 1014



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 92/196 (46%), Gaps = 48/196 (24%)

Query: 113  GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYP 169
            G  GP G  G +GA+G  G +GE G  G  G  GPPG     G+ GD+G+ G KGD G P
Sbjct: 806  GESGPSGPPGIVGARGAPGDRGENGPPGPAGFAGPPGADGQSGLKGDQGESGQKGDAGAP 865

Query: 170  GPQG---IPGDE------------GKRGPKGDMGYP---GRIGLD--------------- 196
            GPQG    PG +            G +GP G  G+P   GR+G                 
Sbjct: 866  GPQGPSGAPGPQGPTGVFGPKGARGAQGPAGATGFPGAAGRVGTPGPNGNPGPPGPPGSA 925

Query: 197  GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT------------NGEKGMT 244
            G++G  G  G  G PGR G  G+ G  G PG+ G PG +G             +G++G+ 
Sbjct: 926  GKEGPKGVRGDAGPPGRAGDPGLQGAAGAPGEKGEPGEDGPSGPDGPPGPQGLSGQRGIV 985

Query: 245  GPRGNRGKSGINGVPG 260
            G  G RG+ G  G+PG
Sbjct: 986  GLPGQRGERGFPGLPG 1001



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 106/214 (49%), Gaps = 22/214 (10%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGA------------PGVVGPPGPQGIPGDEGK 159
           PG +G  G+ G+ G +G++G  G  GE G             PGV+G PGP+G  G+ GK
Sbjct: 559 PGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGK 618

Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
            G KG +G PG +G+PG +G+ G +G  G  G  G  G  G PG  G  G+PG  G  G 
Sbjct: 619 AGEKGLVGAPGLRGLPGKDGETGSQGPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGE 678

Query: 220 PGK---DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRESCS 273
            GK    G+PG+ G PG  G  GE+G  G RG+ G  G+    G+PGTP     K  S  
Sbjct: 679 GGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGASGP 738

Query: 274 LLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGD 307
             PN        PP + G      ++ I   +GD
Sbjct: 739 SGPNGAQG----PPGLQGMPGERGAAGISGPKGD 768



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 83/181 (45%), Gaps = 33/181 (18%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR------GPKGDM 166
           G+ G  G  G +G +GE G  GERG  G  G+ GP G  G PG +G +      GP G  
Sbjct: 686 GVPGEAGAPGLVGPRGERGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGASGPSGPNGAQ 745

Query: 167 GYPGPQGIPGDEGK---RGPKGDMGYPGRIGLDGRDGL---------------------P 202
           G PG QG+PG+ G     GPKGD G  G  G +G  G                       
Sbjct: 746 GPPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGASGKDGSRGLTGPIGPPGPAGPNGEK 805

Query: 203 GEPGLDGIPGRNGMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
           GE G  G PG  G  G P   G++G PG  G  G  G +G+ G+ G +G  G+ G  G P
Sbjct: 806 GESGPSGPPGIVGARGAPGDRGENGPPGPAGFAGPPGADGQSGLKGDQGESGQKGDAGAP 865

Query: 260 G 260
           G
Sbjct: 866 G 866



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 81/196 (41%), Gaps = 45/196 (22%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERG------------------EKGAPGVVGPP---GPQ 151
           G+ GP G +G+ G KG  G  G+ G                  EKG  G  GPP   G +
Sbjct: 761 GISGPKGDRGDTGEKGPEGASGKDGSRGLTGPIGPPGPAGPNGEKGESGPSGPPGIVGAR 820

Query: 152 GIPGDEGKRGPKGDMGYPGP------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
           G PGD G+ GP G  G+ GP       G+ GD+G+ G KGD G PG  G  G  G  G  
Sbjct: 821 GAPGDRGENGPPGPAGFAGPPGADGQSGLKGDQGESGQKGDAGAPGPQGPSGAPGPQGPT 880

Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGT------------------NGTNGEKGMTGPR 247
           G+ G  G  G  G  G  G PG  G  GT                   G  G +G  GP 
Sbjct: 881 GVFGPKGARGAQGPAGATGFPGAAGRVGTPGPNGNPGPPGPPGSAGKEGPKGVRGDAGPP 940

Query: 248 GNRGKSGINGVPGTPA 263
           G  G  G+ G  G P 
Sbjct: 941 GRAGDPGLQGAAGAPG 956



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 72/169 (42%), Gaps = 33/169 (19%)

Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
           G  G+KGE G  G RG +GA    GP G  G PG     GP G  G PG  GIPG +G  
Sbjct: 371 GAPGSKGEAGPTGARGPEGA---QGPRGESGTPGSP---GPAGASGNPGTDGIPGAKGSS 424

Query: 182 ---------------------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
                                      GPKG+ G PG  G  G  G  GE G  G  G  
Sbjct: 425 GGPGIAGAPGFPGPRGPPGPQGATGPLGPKGETGDPGVAGFKGEQGPKGEIGSAGPQGAP 484

Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
           G  G  GK G  G+ G  G NG  GE+G  G RG  G+ G+ G  G P 
Sbjct: 485 GPAGEEGKRGARGEPGAAGPNGPPGERGAPGNRGFPGQDGLAGPKGAPG 533



 Score = 45.8 bits (107), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 91/259 (35%), Gaps = 96/259 (37%)

Query: 96   LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG------ 149
            L   QG      +   PG QGP G  G  G  G  G KG RG +G  G  G PG      
Sbjct: 849  LKGDQGESGQKGDAGAPGPQGPSGAPGPQGPTGVFGPKGARGAQGPAGATGFPGAAGRVG 908

Query: 150  ---------------------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK-------- 180
                                 P+G+ GD G  G  GD G  G  G PG++G+        
Sbjct: 909  TPGPNGNPGPPGPPGSAGKEGPKGVRGDAGPPGRAGDPGLQGAAGAPGEKGEPGEDGPSG 968

Query: 181  ----------RGPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRN------------- 214
                       G +G +G PG+ G  G  GLPG   EPG  G PG +             
Sbjct: 969  PDGPPGPQGLSGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGGPGSSGDRGPPGPVGPPG 1028

Query: 215  --------GMDGIPGKDGLPGKDGIPGTNGTNGE-------------------------- 240
                    G +G PG DG PG+DG  G  G  GE                          
Sbjct: 1029 LTGPSGEPGREGNPGSDGPPGRDGATGIKGDRGETGPLGAPGAPGAPGAPGSVGPTGKQG 1088

Query: 241  -KGMTGPRGNRGKSGINGV 258
             +G +GP+G  G SG  G 
Sbjct: 1089 DRGESGPQGPLGPSGPAGA 1107



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 86/206 (41%), Gaps = 57/206 (27%)

Query: 112  PGLQGPIGQKGEIGAKGE---------------------MGVKGERGEKGAPGVVGP--- 147
            PGLQG  G  GE G  GE                     +G+ G+RGE+G PG+ GP   
Sbjct: 946  PGLQGAAGAPGEKGEPGEDGPSGPDGPPGPQGLSGQRGIVGLPGQRGERGFPGLPGPSGE 1005

Query: 148  PGPQGIPGDE---------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMG---- 188
            PG QG PG                 G  G  G  G PG  G PG +G  G KGD G    
Sbjct: 1006 PGKQGGPGSSGDRGPPGPVGPPGLTGPSGEPGREGNPGSDGPPGRDGATGIKGDRGETGP 1065

Query: 189  -----------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
                        PG +G  G+ G  GE G  G  G +G  G     GL G  G  G  G 
Sbjct: 1066 LGAPGAPGAPGAPGSVGPTGKQGDRGESGPQGPLGPSGPAGA---RGLAGPQGPRGDKGE 1122

Query: 238  NGEKGMTGPRGNRGKSGINGVPGTPA 263
             GE G  G +G+RG +G+ G+PG P 
Sbjct: 1123 AGEAGERGQKGHRGFTGLQGLPGPPG 1148



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 51/119 (42%), Positives = 61/119 (51%), Gaps = 15/119 (12%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGE------------KGAPGVVGPPGPQGIPGDEGK 159
            PG +G  G  G  G  G  G+KG+RGE             GAPG VGP G Q   GD G+
Sbjct: 1036 PGREGNPGSDGPPGRDGATGIKGDRGETGPLGAPGAPGAPGAPGSVGPTGKQ---GDRGE 1092

Query: 160  RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
             GP+G +G  GP G  G  G +GP+GD G  G  G  G+ G  G  GL G+PG  G  G
Sbjct: 1093 SGPQGPLGPSGPAGARGLAGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGSAG 1151



 Score = 42.7 bits (99), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 89/250 (35%), Gaps = 77/250 (30%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------------VGPP 148
           G +GP G +G  G  G  G+ G +G +G PG+                         GP 
Sbjct: 266 GERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAAGAKGEGGATGEAGSPGPM 325

Query: 149 GPQGIPGDEGKRGPKGDMGYPGPQ---------------------GIPGDEGKRGPKGDM 187
           GP+G+PG+ G+ G  G  G  G                       G PG +G+ GP G  
Sbjct: 326 GPRGLPGERGRPGSSGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGAR 385

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP--------------------- 226
           G  G  G  G  G PG PG  G  G  G DGIPG  G                       
Sbjct: 386 GPEGAQGPRGESGTPGSPGPAGASGNPGTDGIPGAKGSSGGPGIAGAPGFPGPRGPPGPQ 445

Query: 227 ------GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR----ESCSLLP 276
                 G  G  G  G  G KG  GP+G  G +G  G PG PA    KR    E  +  P
Sbjct: 446 GATGPLGPKGETGDPGVAGFKGEQGPKGEIGSAGPQGAPG-PAGEEGKRGARGEPGAAGP 504

Query: 277 NSETSQLLIP 286
           N    +   P
Sbjct: 505 NGPPGERGAP 514



 Score = 39.7 bits (91), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 3/73 (4%)

Query: 116  GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGDMGYPGPQ 172
            GP G++G+ G  G  G  G  G  GA G+ GP GP   +G  G+ G+RG KG  G+ G Q
Sbjct: 1082 GPTGKQGDRGESGPQGPLGPSGPAGARGLAGPQGPRGDKGEAGEAGERGQKGHRGFTGLQ 1141

Query: 173  GIPGDEGKRGPKG 185
            G+PG  G  G +G
Sbjct: 1142 GLPGPPGSAGDQG 1154


>gi|268322310|emb|CBH32886.1| fibrillar collagen [Haliotis tuberculata]
          Length = 919

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 92/209 (44%), Gaps = 45/209 (21%)

Query: 97  VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI--- 153
              QG      E  P G  GP G +G  G +G+ G  G  GE GAPG  G PGP G+   
Sbjct: 196 AGAQGLIGMPGERGPIGRPGPSGNRGLTGERGQDGEPGRPGEAGAPGSPGQPGPSGLVAA 255

Query: 154 ---------------------PGDEGKRGPKGDMGYPGP---QGIPGDEGKRGPKGD--- 186
                                 G  G +GP+G  G  GP    G PGD+G+ G KGD   
Sbjct: 256 KGDRGETGPSGEPGPPGSSGQRGQAGAQGPQGPTGLAGPTGEMGQPGDDGQTGAKGDTGA 315

Query: 187 MGYP---------------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
            GYP               GR G  G  G+PG  G  G PGR G  G PG  G PG  G 
Sbjct: 316 RGYPGEAGPIGAPGNEGREGRKGNRGSGGIPGNSGTPGDPGRAGPPGSPGAQGPPGPAGA 375

Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
            G  G +GE+G TGP G  G++G  G+PG
Sbjct: 376 TGLAGDSGERGETGPPGRAGEAGSPGLPG 404



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/128 (47%), Positives = 70/128 (54%), Gaps = 6/128 (4%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  GE G  GE+G  GERGE+GAPG VG  G +G PG+ G  GP G++G  GP G  G  
Sbjct: 134 GPPGEAGIPGEVGSSGERGERGAPGEVGVAGSRGAPGERGPSGPSGEVGQSGPPGPAGAR 193

Query: 179 GKRGPKGDMGYP------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
           G  G +G +G P      GR G  G  GL GE G DG PGR G  G PG  G PG  G+ 
Sbjct: 194 GDAGAQGLIGMPGERGPIGRPGPSGNRGLTGERGQDGEPGRPGEAGAPGSPGQPGPSGLV 253

Query: 233 GTNGTNGE 240
              G  GE
Sbjct: 254 AAKGDRGE 261



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 99  MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
            +G   +     P GL GP G+ G+ G  G+ G KG+ G +G PG  GP G  G  G EG
Sbjct: 276 QRGQAGAQGPQGPTGLAGPTGEMGQPGDDGQTGAKGDTGARGYPGEAGPIGAPGNEGREG 335

Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
           ++G +G  G PG  G PGD G+ GP      PG  G  G  G  G  GL G  G  G  G
Sbjct: 336 RKGNRGSGGIPGNSGTPGDPGRAGP------PGSPGAQGPPGPAGATGLAGDSGERGETG 389

Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTG 245
            PG+ G  G  G+PG +G  GE+G +G
Sbjct: 390 PPGRAGEAGSPGLPGLDGAQGERGSSG 416



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 85/188 (45%), Gaps = 27/188 (14%)

Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
           G    T     PG  G  G  GE G  G  GV G  GE+G  G+ GPPG QG  G++G  
Sbjct: 5   GSAGQTGARGAPGFPGADGAPGERGPAGNPGVDGNPGEQGPQGIQGPPGLQGPAGNKGDT 64

Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDM---------GYPGRIGLDGRDG----------- 200
           GP G  G  G  G PG  G RGP G+          G  G IG  GR G           
Sbjct: 65  GPAGKDGDVGRPGAPGSRGPRGPAGEAGLEGPPGSPGAEGEIGAAGRPGEQGFQGLPGPA 124

Query: 201 -------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
                   PG PG  GIPG  G  G  G+ G PG+ G+ G+ G  GE+G +GP G  G+S
Sbjct: 125 GPPGEAGRPGPPGEAGIPGEVGSSGERGERGAPGEVGVAGSRGAPGERGPSGPSGEVGQS 184

Query: 254 GINGVPGT 261
           G  G  G 
Sbjct: 185 GPPGPAGA 192



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 85/183 (46%), Gaps = 30/183 (16%)

Query: 111 PPGLQGPIGQKGE---------IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
           PPGLQGP G KG+         +G  G  G +G RG  G  G+ GPPG  G  G+ G  G
Sbjct: 51  PPGLQGPAGNKGDTGPAGKDGDVGRPGAPGSRGPRGPAGEAGLEGPPGSPGAEGEIGAAG 110

Query: 162 PKGDMGY------------------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
             G+ G+                  PG  GIPG+ G  G +G+ G PG +G+ G  G PG
Sbjct: 111 RPGEQGFQGLPGPAGPPGEAGRPGPPGEAGIPGEVGSSGERGERGAPGEVGVAGSRGAPG 170

Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPG 260
           E G  G  G  G  G PG  G  G  G  G  G  GE+   G  GP GNRG +G  G  G
Sbjct: 171 ERGPSGPSGEVGQSGPPGPAGARGDAGAQGLIGMPGERGPIGRPGPSGNRGLTGERGQDG 230

Query: 261 TPA 263
            P 
Sbjct: 231 EPG 233



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 98/247 (39%), Gaps = 59/247 (23%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGA------PGVVGP---PGPQGIPGDEGKRGP 162
           PG +GP G  GE+G  G  G  G RG+ GA      PG  GP   PGP G  G  G+RG 
Sbjct: 169 PGERGPSGPSGEVGQSGPPGPAGARGDAGAQGLIGMPGERGPIGRPGPSGNRGLTGERGQ 228

Query: 163 KGDMGYPGPQGIPGDEGKRGP------KGDMGYP-------------------------- 190
            G+ G PG  G PG  G+ GP      KGD G                            
Sbjct: 229 DGEPGRPGEAGAPGSPGQPGPSGLVAAKGDRGETGPSGEPGPPGSSGQRGQAGAQGPQGP 288

Query: 191 ----------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK------DGIPGT 234
                     G+ G DG+ G  G+ G  G PG  G  G PG +G  G+       GIPG 
Sbjct: 289 TGLAGPTGEMGQPGDDGQTGAKGDTGARGYPGEAGPIGAPGNEGREGRKGNRGSGGIPGN 348

Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIP--PTIVGS 292
           +GT G+ G  GP G+ G  G  G  G   +     E     P     +   P  P + G+
Sbjct: 349 SGTPGDPGRAGPPGSPGAQGPPGPAGATGLAGDSGERGETGPPGRAGEAGSPGLPGLDGA 408

Query: 293 EHIFSSS 299
           +    SS
Sbjct: 409 QGERGSS 415



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 98/225 (43%), Gaps = 39/225 (17%)

Query: 128 GEMGVKGERGEKGAPGV---------VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
           G  G  G+ G +GAPG           GP G  G+ G+ G++GP+G  G PG QG  G++
Sbjct: 2   GPPGSAGQTGARGAPGFPGADGAPGERGPAGNPGVDGNPGEQGPQGIQGPPGLQGPAGNK 61

Query: 179 GKRGPK---GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---- 231
           G  GP    GD+G PG  G  G  G  GE GL+G PG  G +G  G  G PG+ G     
Sbjct: 62  GDTGPAGKDGDVGRPGAPGSRGPRGPAGEAGLEGPPGSPGAEGEIGAAGRPGEQGFQGLP 121

Query: 232 --------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
                         PG  G  GE G +G RG RG  G  GV G+      +  S    P+
Sbjct: 122 GPAGPPGEAGRPGPPGEAGIPGEVGSSGERGERGAPGEVGVAGSRGAPGERGPSG---PS 178

Query: 278 SETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPS 322
            E  Q   PP   G+     +  ++   G+   +     G P PS
Sbjct: 179 GEVGQSG-PPGPAGARGDAGAQGLIGMPGERGPI-----GRPGPS 217



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 106 TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
           T +   PG  GP+G  G  GAKG  G  G  G  G  G VG PG  G  G +G+RG +G+
Sbjct: 487 TGQPGSPGKDGPLGPVGRSGAKGNRGAAGATGPPGLNGPVGAPGNSGPAGPQGERGERGE 546

Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------PGLDGI 210
           +G  GP G+    G+RGP G  G  G  G  G DG  G+                G +G 
Sbjct: 547 VGSSGPAGL---TGQRGPAGARGLQGDKGETGWDGAKGDKGWPGMPGPQGPPGPLGSNGD 603

Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
           PG  G  G+ G++G  G  G PG +G  G++G  GP G RG SG +G+
Sbjct: 604 PGPPGPVGVAGQNGKAGSRGRPGRSGNAGQQGPPGPSGARGPSGDDGL 651



 Score = 43.5 bits (101), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 76/186 (40%), Gaps = 39/186 (20%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY-- 168
           PPG  G  G  G  GA G  G  GERGE G PG  G  G  G+PG +G +G +G  G   
Sbjct: 360 PPGSPGAQGPPGPAGATGLAGDSGERGETGPPGRAGEAGSPGLPGLDGAQGERGSSGLNG 419

Query: 169 -------------PGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRD------------- 199
                         G  G P   G+ G  GP G  G PG  G +G D             
Sbjct: 420 PSGPPGPVGPQGERGANGFPGAQGEAGAAGPPGSAGEPGLRGENGNDGAPGQPGPPGPTG 479

Query: 200 --------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
                   G PG PG DG  G  G  G  G  G  G  G PG NG  G  G +GP G +G
Sbjct: 480 PAGYPGETGQPGSPGKDGPLGPVGRSGAKGNRGAAGATGPPGLNGPVGAPGNSGPAGPQG 539

Query: 252 KSGING 257
           + G  G
Sbjct: 540 ERGERG 545



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 62/158 (39%), Gaps = 42/158 (26%)

Query: 98  AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
             +G   +     PPGL GP+G  G  G  G  G +GERGE      VG  GP G+    
Sbjct: 506 GAKGNRGAAGATGPPGLNGPVGAPGNSGPAGPQGERGERGE------VGSSGPAGL---T 556

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGD------------------------------M 187
           G+RGP G  G    QG  G+ G  G KGD                               
Sbjct: 557 GQRGPAGARGL---QGDKGETGWDGAKGDKGWPGMPGPQGPPGPLGSNGDPGPPGPVGVA 613

Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
           G  G+ G  GR G  G  G  G PG +G  G  G DGL
Sbjct: 614 GQNGKAGSRGRPGRSGNAGQQGPPGPSGARGPSGDDGL 651


>gi|119569213|gb|EAW48828.1| collagen, type XIX, alpha 1, isoform CRA_a [Homo sapiens]
          Length = 1038

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 91/200 (45%), Gaps = 58/200 (29%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  GP GQKGE    GE   KGE+G++G PGV+G                       G 
Sbjct: 366 PGSVGPKGQKGE---PGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQ 422

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK----------------GDMGYPGRIG 194
           QG  G  G RGP GD+G PG  GIPG +G +G K                G+ G PG+  
Sbjct: 423 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKS- 481

Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGM 243
                 LPGEPGLDG PG  G  G  G+ GLPG             GIPG  G  G  G 
Sbjct: 482 ------LPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGE 535

Query: 244 TGPRGNRGKSGINGVPGTPA 263
            G +G RG  G+ G PGTP 
Sbjct: 536 PGIQGPRGLPGLPGTPGTPG 555



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 70/147 (47%), Gaps = 32/147 (21%)

Query: 96  LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERG----------------EK 139
           L   QG   S     PPG    +G  GE G  G+ G+KGE+G                E 
Sbjct: 419 LKGQQGSAGSMGPRGPPGD---VGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEA 475

Query: 140 GAPG--VVGPPGPQGIPGDEGKRGPKGDMGYPG---------PQGI--PGDEGKRGPKGD 186
           G PG  + G PG  G PG  G RGPKG+ G PG         PQGI  PG  G +GP G+
Sbjct: 476 GPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGE 535

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
            G  G  GL G  G PG PG DG+PGR
Sbjct: 536 PGIQGPRGLPGLPGTPGTPGNDGVPGR 562



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 82/196 (41%), Gaps = 62/196 (31%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
           PG  G +G KG+ G  GE   KGE+G++G PGV+G                       G 
Sbjct: 363 PGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPGPPGLIGSPGLKGQ 422

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK-------------------GDMG--Y 189
           QG  G  G RGP GD+G PG  GIPG +G +G K                   G  G   
Sbjct: 423 QGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGKSL 482

Query: 190 PGRIGLDGRDGLPGE---------PGLDG-----------IPGRNGMDGIPGKDGLPGKD 229
           PG  GLDG  G PG          PG+ G           IPGR G  G  G+ G+ G  
Sbjct: 483 PGEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGEPGIQGPR 542

Query: 230 GIPGTNGTNGEKGMTG 245
           G+PG  GT G  G  G
Sbjct: 543 GLPGLPGTPGTPGNDG 558



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 78/145 (53%), Gaps = 15/145 (10%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPKGDMGYPGPQ 172
           G  G  G +G  GVKG+RG  G PG+ G       PGP G+PG+ G+RGP GD+G+PGP+
Sbjct: 756 GAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGPE 815

Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
                    GP G  G  G+ G+ G  G+ G+PG  G  G  G  GIPG  G  G+ G P
Sbjct: 816 ---------GPSGKPGINGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGDRGSQGERGKP 866

Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
           G  G  G  G  GP GN+G  G  G
Sbjct: 867 GLTGMKGAIGPMGPPGNKGSMGSPG 891



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 78/168 (46%), Gaps = 33/168 (19%)

Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
           A G  G KGE G  G PG VGP G +G PG+   +G KGD G PG  G  G +G+ G  G
Sbjct: 350 AGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVIGSQGVKGEPGDPG 409

Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI-------------- 231
             G  G  GL G+ G  G  G  G PG  G+   PG+ G+PGK GI              
Sbjct: 410 PPGLIGSPGLKGQQGSAGSMGPRGPPGDVGL---PGEHGIPGKQGIKGEKGDPGGIIGPP 466

Query: 232 ----------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
                           PG  G +G  G  GPRG +G+ G+ GV G+P 
Sbjct: 467 GLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSPG 514



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 61/131 (46%), Gaps = 36/131 (27%)

Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
           PG  G+PG EG  G KGD G  GP GI G               + G+RGP GD+G+PG 
Sbjct: 755 PGAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGVPGEPGERGPVGDIGFPGP 814

Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMTGPRGN 249
            G  G+ G                  I GKDG+PG  GI   PG  G  GE+G  G  G+
Sbjct: 815 EGPSGKPG------------------INGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGD 856

Query: 250 RGKSGINGVPG 260
           RG  G  G PG
Sbjct: 857 RGSQGERGKPG 867



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 92/239 (38%), Gaps = 80/239 (33%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGD 165
           PG  G  G++G  G+KGE G KGE+GEKG P + G  G  G+ GD       G +G KGD
Sbjct: 217 PGFPGQKGEQGFEGSKGETGEKGEQGEKGDPALAGLNGENGLKGDLGPHGPPGPKGEKGD 276

Query: 166 ------------MGYPGPQGIPGDEGKR-------------------------------- 181
                       +G  GPQG PG EG+R                                
Sbjct: 277 TGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLGG 336

Query: 182 ---------------GPKGDMG------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
                          G KGD G      +PG +G  G+ G PGEP   G  G  G  G+ 
Sbjct: 337 YYNKDNKGNDEHEAGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEPGVI 396

Query: 221 GKDGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
           G  G+ G+          G PG  G  G  G  GPRG  G  G+ G  G P     K E
Sbjct: 397 GSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGE 455



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 9/84 (10%)

Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
           KGE G  G  G  G++G KG PG  G  G  G PG       KG+ G+ G +G  G++G+
Sbjct: 187 KGEAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQ------KGEQGFEGSKGETGEKGE 240

Query: 181 RGPKGDMGYPGRIGLDGRDGLPGE 204
           +G KGD   P   GL+G +GL G+
Sbjct: 241 QGEKGD---PALAGLNGENGLKGD 261



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
           KG+ G PG    PG  G++G KG+   PG  GL G  G PG+ G  G  G  G  G  G+
Sbjct: 187 KGEAGLPG---APGSPGQKGHKGE---PGENGLHGAPGFPGQKGEQGFEGSKGETGEKGE 240

Query: 223 DGLPGKDGIPGTNGTNGEKG 242
            G  G   + G NG NG KG
Sbjct: 241 QGEKGDPALAGLNGENGLKG 260



 Score = 40.0 bits (92), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
           PG +GP G++G+ G  G+ G +GERG+ G  G+ G  GP G PG+      KG MG PG 
Sbjct: 839 PGDRGPKGERGDQGIPGDRGSQGERGKPGLTGMKGAIGPMGPPGN------KGSMGSPGH 892

Query: 172 Q 172
           Q
Sbjct: 893 Q 893



 Score = 39.7 bits (91), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 34/69 (49%)

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
           GE GL G PG  G  G  G+ G  G  G PG  G  GE+G  G +G  G+ G  G  G P
Sbjct: 188 GEAGLPGAPGSPGQKGHKGEPGENGLHGAPGFPGQKGEQGFEGSKGETGEKGEQGEKGDP 247

Query: 263 AICAYKRES 271
           A+     E+
Sbjct: 248 ALAGLNGEN 256


>gi|332206395|ref|XP_003252276.1| PREDICTED: collagen alpha-1(II) chain isoform 2 [Nomascus
           leucogenys]
          Length = 1418

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 90/194 (46%), Gaps = 39/194 (20%)

Query: 97  VAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGP 150
              +G      E  PPG     GP G  G+ GAKGE G  G++G+ GAPG  GP   PGP
Sbjct: 746 AGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 805

Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGK------------------------RGPKGD 186
           QG  G  G +G +G  G PG  G PG  G+                        +G +GD
Sbjct: 806 QGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGD 865

Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
            G PGR          GEPGL G  G  G  G PG DG  G +G PG  G  G++G+ G 
Sbjct: 866 SGPPGRA---------GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGL 916

Query: 247 RGNRGKSGINGVPG 260
            G RG+ G  G+PG
Sbjct: 917 PGQRGERGFPGLPG 930



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 88/187 (47%), Gaps = 42/187 (22%)

Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG----------- 164
           GP+G KG+ G  G  G KGE+G KG PG  GP G  G  G+EGKRG +G           
Sbjct: 378 GPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPP 437

Query: 165 -DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMDGIP 220
            + G PG +G+PG +G  GPKG  G  G  GL    G +G PG PG  G+PG  G+ G P
Sbjct: 438 GERGAPGNRGVPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRP 497

Query: 221 G---------------------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
           G                             G PG  G PG  G +GE G  G +G  G  
Sbjct: 498 GDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGASGEPGKAGEKGLPGAP 557

Query: 254 GINGVPG 260
           G+ G+PG
Sbjct: 558 GLRGLPG 564



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 45/187 (24%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP------------GDEGKRGPKGDM 166
           G+KGE+G  G  G  G RG  G  G  GPPGP G              G++G+ G KGD 
Sbjct: 732 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 791

Query: 167 GYPGPQGIPGDEGKRGP---------KGDMGYPGRIGLDG-------------------- 197
           G PGPQG  G  G +GP         +G  G PG  G  G                    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP 851

Query: 198 ----RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
               +DG  G  G  G PGR G  G+ G  G PG+ G PG +G +G +G  GP+G  G+ 
Sbjct: 852 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 911

Query: 254 GINGVPG 260
           GI G+PG
Sbjct: 912 GIVGLPG 918



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 86/195 (44%), Gaps = 51/195 (26%)

Query: 108 EYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP-------------- 150
           E   PGL GP G++G   E G+ G  G++G RG  G PG  GP G               
Sbjct: 619 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPG 678

Query: 151 -QGIPGDEGK------RGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMG 188
            QG+PG+ G       +G +GD+G  GP+G PG +G RG                KG++G
Sbjct: 679 LQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVG 738

Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTG 245
            PG  G  G  G PGE          G  G PG  G    PG DG PG  G  GE G  G
Sbjct: 739 PPGPAGSAGARGAPGE---------RGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG 789

Query: 246 PRGNRGKSGINGVPG 260
             G  G  G +G PG
Sbjct: 790 DAGAPGPQGPSGAPG 804



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------------GPK 163
           G  GE GA G  G KG+RG+      VG  GP+G PG +G R               G K
Sbjct: 681 GMPGERGAAGIAGPKGDRGD------VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 734

Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
           G++G PGP G  G  G  G +G+ G PG  G  G  G  G+PG  G  G  G     G  
Sbjct: 735 GEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK---GDA 791

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
           G PG  G  G  G  G  G+TGP+G RG  G  G  G P    
Sbjct: 792 GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG 834



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 87/209 (41%), Gaps = 75/209 (35%)

Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGP------PGPQGIPGD---------------- 156
           G+ G  GA+G  G +G RGE G PG  GP      PG  GIPG                 
Sbjct: 306 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP 365

Query: 157 -----------------------------EGKRGPKGDMGYPGPQGIP---GDEGKRGPK 184
                                        +G++GPKG+ G  GPQG P   G+EGKRG +
Sbjct: 366 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 425

Query: 185 ------------------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
                             G+ G PG+ GL G  G PGE G  G+ G  G +G PG+   P
Sbjct: 426 GEPGGVGPIGPPGERGAPGNRGVPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR---P 482

Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           G+ G+PG  G  G  G  GP+G  G SG 
Sbjct: 483 GEPGLPGARGLTGRPGDAGPQGKVGPSGA 511



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 77/175 (44%), Gaps = 42/175 (24%)

Query: 113 GLQGPIGQKGEIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDE 157
           GLQGP G  G  G  G  G               ++G  GE+GA G+ GP          
Sbjct: 645 GLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGP---------- 694

Query: 158 GKRGPKGDMGYPGPQGIPGDEGKR---------------GPKGDMGYPGRIGLDGRDGLP 202
             +G +GD+G  GP+G PG +G R               G KG++G PG  G  G  G P
Sbjct: 695 --KGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAP 752

Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
           GE G  G PG  G  G PG DG PG  G  G  G  G+ G  GP+G  G  G  G
Sbjct: 753 GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 807



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 91/216 (42%), Gaps = 60/216 (27%)

Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
           GL GP G  GE G  G  G KG  G+ G PG  G PG +G+ G  G  GP+G +G  G  
Sbjct: 453 GLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP 512

Query: 172 --------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN--- 214
                         +G PG  G  GPKG  G PG+    G  GLPG PGL G+PG++   
Sbjct: 513 GEDGRPGPPGPQGARGQPGVMGFPGPKGASGEPGKA---GEKGLPGAPGLRGLPGKDGET 569

Query: 215 ---------------GMDGIPGK---------------------DGLPGKDGIPGTNGTN 238
                          G  G PG                       G+PG+ G PG  G  
Sbjct: 570 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPR 629

Query: 239 GEKGMTGPRGNRGKSGIN---GVPGTPAICAYKRES 271
           GE+G  G RG+ G  G+    G+PGTP     K  S
Sbjct: 630 GERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 665



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 78/193 (40%), Gaps = 57/193 (29%)

Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR----- 181
           KGE G  G RG +GA G      P+G PG  G  GP G  G PG  GIPG +G       
Sbjct: 305 KGEAGPTGARGPEGAQG------PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI 358

Query: 182 ----------------------GPKGDMGYPGRIGLDGRDGLPGEP---GLDGIPGRNGM 216
                                 GPKG  G PG  G  G  G  GEP   G  G PG  G 
Sbjct: 359 AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE 418

Query: 217 D---------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
           +                     G PG  G+PG+DG+ G  G  GE+G +G  G +G +G 
Sbjct: 419 EGKRGARGEPGGVGPIGPPGERGAPGNRGVPGQDGLAGPKGAPGERGPSGLAGPKGANGD 478

Query: 256 NGVPGTPAICAYK 268
            G PG P +   +
Sbjct: 479 PGRPGEPGLPGAR 491



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 18/168 (10%)

Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGD------------- 165
           GE GA G +G +GERG   E+G+PG  G  GP+G+PG  G  GPKG              
Sbjct: 618 GEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPP 677

Query: 166 --MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
              G PG +G  G  G +G +GD+G  G  G  G+DG  G  G  G PG  G +G  G+ 
Sbjct: 678 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEV 737

Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
           G PG  G  G  G  GE+G TGP G  G +G  G  G P     + E+
Sbjct: 738 GPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA 785



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 83/210 (39%), Gaps = 66/210 (31%)

Query: 122  GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG-- 179
            G  GA+G+ G  G  GE G  G  GPPG +G PGD+G   P G  G PGPQG+ G  G  
Sbjct: 858  GPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG---PSGAEGPPGPQGLAGQRGIV 914

Query: 180  ----KRGPKGDMGYPGRIGLDGRDGLPG---------------------------EPGLD 208
                +RG +G  G PG  G  G+ G PG                            PG D
Sbjct: 915  GLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGAD 974

Query: 209  GIPGRNGMDGIP------------------------------GKDGLPGKDGIPGTNGTN 238
            G PGR+G  G+                               G  G  G  G  G +G  
Sbjct: 975  GPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPA 1034

Query: 239  GEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G +G+ GP+G RG  G  G PG   +  ++
Sbjct: 1035 GARGIQGPQGPRGDKGEAGEPGERGLKGHR 1064



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 84/212 (39%), Gaps = 58/212 (27%)

Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM----- 166
           PG++G  G  G  GAKGE G  G +GE G+PG  G PGP G  G  G+RG  G       
Sbjct: 215 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGESGSPGPMGPRGLPGERGRTGPAGAAGA 274

Query: 167 -------------------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
                                          G  GP G  G EG +GP+G+ G PG  G 
Sbjct: 275 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 334

Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPG------------------KDGLPGKDGIPGTNGT 237
            G     G PG DGIPG  G  G PG                    G  G  G  G  G 
Sbjct: 335 AGAS---GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGI 391

Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
            G KG  GP+G  G +G  G PG PA    KR
Sbjct: 392 AGFKGEQGPKGEPGPAGPQGAPG-PAGEEGKR 422



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 3/70 (4%)

Query: 173 GIPGDEGKRGP---KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
           G PG  G+RGP   +G  G+PG  GL G  G  G PGLDG  G  G  G+ G+ G PG+ 
Sbjct: 189 GKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGES 248

Query: 230 GIPGTNGTNG 239
           G PG  G  G
Sbjct: 249 GSPGPMGPRG 258


>gi|281342748|gb|EFB18332.1| hypothetical protein PANDA_015150 [Ailuropoda melanoleuca]
          Length = 1346

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 89/175 (50%), Gaps = 20/175 (11%)

Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
           L G  G+KG+ G  G  GV G +G +G PG  G PG  G PG  G  GPKG+ G PG  G
Sbjct: 615 LLGSKGEKGDPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPG 674

Query: 174 IPGDEGKRGPKGDMGYPGRIG------------------LDGRDGLPGEPGLDGI--PGR 213
           + G  G +G  GDMG+PG  G                  L G+ G  G+PG+ GI  PG 
Sbjct: 675 LTGPPGLKGSIGDMGFPGPQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGVSGIGLPGL 734

Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
            G  G PG  G PG  GI G+ G  G  G+ G  G +G+ G+ G PGTP +   K
Sbjct: 735 PGPKGEPGLPGYPGNPGIKGSRGDTGLPGLPGTPGAKGQPGLPGFPGTPGLPGAK 789



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 81/161 (50%), Gaps = 19/161 (11%)

Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
           P G QG  G  G+ G  G+ G+ G  G KG PG+ G PG  G PG +G     GDMG+PG
Sbjct: 636 PKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPGLTGPPGLKGSI---GDMGFPG 692

Query: 171 PQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
           PQG+ G                 G++G KGD G  G IGL G  G  GEPGL G PG  G
Sbjct: 693 PQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGVSG-IGLPGLPGPKGEPGLPGYPGNPG 751

Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
           + G  G  GLPG  G PG  G  G  G  G  G  G  GIN
Sbjct: 752 IKGSRGDTGLPGLPGTPGAKGQPGLPGFPGTPGLPGAKGIN 792



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 54/82 (65%)

Query: 143  GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
            G+ GP GP+G+PG+ G +G +G+ G PG  G+PG +G +GP G  G PGR GL+G  G P
Sbjct: 925  GLPGPEGPRGLPGNGGIKGERGNPGQPGQPGLPGLKGDQGPPGQQGNPGRPGLNGMKGDP 984

Query: 203  GEPGLDGIPGRNGMDGIPGKDG 224
            G PG+ G PG  G  GIPG  G
Sbjct: 985  GLPGVPGFPGMKGPSGIPGSAG 1006



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 3/76 (3%)

Query: 170  GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
            GP+G+PG+ G +G +G+ G PG+ GL G  G  G PG  G PGR G++G+ G  GLPG  
Sbjct: 931  GPRGLPGNGGIKGERGNPGQPGQPGLPGLKGDQGPPGQQGNPGRPGLNGMKGDPGLPG-- 988

Query: 230  GIPGTNGTNGEKGMTG 245
             +PG  G  G  G+ G
Sbjct: 989  -VPGFPGMKGPSGIPG 1003



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 44/77 (57%), Gaps = 6/77 (7%)

Query: 112  PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGY 168
            PG +GP G  G  G KGE G  G+ G+ G PG+    GPPG QG PG  G  G KGD G 
Sbjct: 927  PGPEGPRGLPGNGGIKGERGNPGQPGQPGLPGLKGDQGPPGQQGNPGRPGLNGMKGDPGL 986

Query: 169  PGPQGIPGDEGKRGPKG 185
            P   G+PG  G +GP G
Sbjct: 987  P---GVPGFPGMKGPSG 1000


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.315    0.136    0.421 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,630,977,394
Number of Sequences: 23463169
Number of extensions: 841900971
Number of successful extensions: 3946465
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16677
Number of HSP's successfully gapped in prelim test: 13988
Number of HSP's that attempted gapping in prelim test: 1720403
Number of HSP's gapped (non-prelim): 549346
length of query: 902
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 750
effective length of database: 8,792,793,679
effective search space: 6594595259250
effective search space used: 6594595259250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 82 (36.2 bits)