BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12803
(902 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q68BL8|OLM2B_HUMAN Olfactomedin-like protein 2B OS=Homo sapiens GN=OLFML2B PE=2 SV=2
Length = 750
Score = 146 bits (368), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)
Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
GAWMKDP E+ ++T L E+++ + FK S +Y L + G HVV+
Sbjct: 515 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 571
Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
N +FYY++ F+ +I+++DL + L V + G++ +DF++DENGLW+
Sbjct: 572 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 631
Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
IY G S ++KL+ A L Q + TW L G+ FV+CGVLY VDS
Sbjct: 632 IYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 691
Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
RN NI +A D + N + L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 692 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 748
>sp|A6QLD2|OLM2B_BOVIN Olfactomedin-like protein 2B OS=Bos taurus GN=OLFML2B PE=2 SV=1
Length = 759
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 13/237 (5%)
Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
GAWMKDP E+ ++T L E+++ + FK S +Y L + G HVV+
Sbjct: 524 GAWMKDP---LAKDERIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 580
Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
N +FYY++ F+ +I+++DL + L V + G++ +DF++DENGLW+
Sbjct: 581 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 640
Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
IY G S ++KL+ L Q + TW L G+ FV+CGVLY VDS
Sbjct: 641 IYPALDDEGFSQEVIVLSKLNAVDLSTQKETTWRTGLRRNLYGNCFVICGVLYAVDSHNQ 700
Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
RN NI +A D + N + L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 701 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 757
>sp|Q3V1G4|OLM2B_MOUSE Olfactomedin-like protein 2B OS=Mus musculus GN=Olfml2b PE=1 SV=2
Length = 746
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 126/237 (53%), Gaps = 13/237 (5%)
Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
GAWMKDP ++ ++T L E+++ + FK S +Y L + G HVV+
Sbjct: 511 GAWMKDP---LAKDDRIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWIGTGHVVY 567
Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
N +FYY++ F+ +I+++DL + L V + G++ +DF++DENGLW+
Sbjct: 568 NGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWL 627
Query: 699 IY------GLSNNNTAVTKLDTATL--QIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
IY G + ++KL+ L Q + TW L G+ FV+CGVLY VDS
Sbjct: 628 IYPALDDEGFNQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQ 687
Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
RN NI +A D + N + L F N ++ TT I YN + + LY WD G+ +TY + +
Sbjct: 688 RNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIF 744
>sp|A2BD09|OLM2A_PIG Olfactomedin-like protein 2A OS=Sus scrofa GN=OLFML2A PE=3 SV=2
Length = 607
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 135/276 (48%), Gaps = 27/276 (9%)
Query: 545 PNRTLDCQ--VYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEKFWMTTD 602
P R C+ + AV PV H S + GAWMKDP + +K ++T
Sbjct: 344 PGREASCEGTLRAVDPPVRHHSYGRHE-----------GAWMKDP---AAKDDKIYVTNY 389
Query: 603 SDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQFDLGSS 662
L E+++ + FK S Y L + G HVV+ +FYY++ F+ +I+++DL
Sbjct: 390 YYGNSLVEFRNLENFKQGRWSNMYKLPYNWIGTGHVVYQGAFYYNRAFTKNIIKYDLRQR 449
Query: 663 KIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWVIYGLSNNN-------TAVTKLD 713
+ + L V + G++ +DF++DE+GLWVIY +++ +++LD
Sbjct: 450 FVASWALLPDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPAADDRDEAQPEVIVLSRLD 509
Query: 714 TATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKNDLLEVSL 771
L + + TW L G+ F+VCG+LY VD+ R ++ +A D + + L
Sbjct: 510 PGDLSVHRETTWKTRLRRNSYGNCFLVCGILYAVDTYNQREGHVAYAFDTHTGADARLQL 569
Query: 772 NFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
F N TT I YN + + LY WD G+ LTY + +
Sbjct: 570 PFLNEHAYTTQIDYNPKERVLYAWDNGHQLTYTLHF 605
>sp|Q68BL7|OLM2A_HUMAN Olfactomedin-like protein 2A OS=Homo sapiens GN=OLFML2A PE=2 SV=1
Length = 652
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 138/282 (48%), Gaps = 30/282 (10%)
Query: 539 VSSKGLPNRTLDCQ--VYAVGKPVFHKSTSMKKESSGKPVDVIFGAWMKDPHPTSGNSEK 596
VSS+G R C+ + AV PV H S + GAWMKDP + ++
Sbjct: 386 VSSQG---REASCEGTLRAVDPPVRHHSYGRHE-----------GAWMKDP---AARDDR 428
Query: 597 FWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVFNNSFYYHKKFSNSIVQ 656
++T L E+++ + FK S Y L + G HVV+ +FYY++ F+ +I++
Sbjct: 429 IYVTNYYYGNSLVEFRNLENFKQGRWSNMYKLPYNWIGTGHVVYQGAFYYNRAFTKNIIK 488
Query: 657 FDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWVIY-GLSNNNTA----- 708
+DL + + L V + G++ +DF++DE+GLWVIY + + + A
Sbjct: 489 YDLRQRFVASWALLPDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPAVDDRDEAQPEVI 548
Query: 709 -VTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNIRFALDLYKND 765
+++LD L + + TW L G+ F+VCG+LY VD+ + + +A D +
Sbjct: 549 VLSRLDPGDLSVHRETTWKTRLRRNSYGNCFLVCGILYAVDTYNQQEGQVAYAFDTHTGT 608
Query: 766 LLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
L F N TT I YN + + LY WD G+ LTY + +
Sbjct: 609 DARPQLPFLNEHAYTTQIDYNPKERVLYAWDNGHQLTYTLHF 650
>sp|Q8BHP7|OLM2A_MOUSE Olfactomedin-like protein 2A OS=Mus musculus GN=Olfml2a PE=1 SV=1
Length = 681
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 14/238 (5%)
Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
GAWMKDP + ++ ++T L E+++ + FK S Y L + G HVV+
Sbjct: 445 GAWMKDP---AALDDRIYVTNYYYGNSLVEFRNLENFKQGRWSNMYKLPYNWIGTGHVVY 501
Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
+FYY++ F+ +I+++DL + + L V + G++ +DF++DE+GLWV
Sbjct: 502 QGAFYYNRAFTKNIIKYDLRQRFVASWALLPDVVYEDTTPWKWRGHSDIDFAVDESGLWV 561
Query: 699 IYGLSNNN-------TAVTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVT 749
IY + + +++LD A L + + TW L G+ F+VCG+LY VD+
Sbjct: 562 IYPAVDEHDETQHEVIVLSRLDPADLSVHRETTWKTRLRRNSYGNCFLVCGILYTVDTYN 621
Query: 750 DRNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
+ +A D + L F N ++ TT + YN + + LY WD G+ LTY + +
Sbjct: 622 QHEGQVAYAFDTHTGTDAHPQLPFLNEYSYTTQVDYNPKERVLYAWDNGHQLTYTLHF 679
>sp|A4IIT5|OLM2A_XENTR Olfactomedin-like protein 2A OS=Xenopus tropicalis GN=olfml2a PE=2
SV=1
Length = 642
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 121/237 (51%), Gaps = 13/237 (5%)
Query: 581 GAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVVF 640
GAWMKDP G + ++T +L E+++ D FK S Y + + G HVVF
Sbjct: 407 GAWMKDPIAKDG---RIYVTNYYYGNNLVEFRNLDNFKQGRWSNLYKVPYNWIGTGHVVF 463
Query: 641 NNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTV--DPNIKLYKTGYNVMDFSLDENGLWV 698
+FYY++ F+ +I+++DL + L V + G++ +DF++DE+GLWV
Sbjct: 464 QGAFYYNRAFTKNIIKYDLKQRFVAAWTLLHDVVYEDTTPWKWRGHSDIDFAVDESGLWV 523
Query: 699 IYGLSNNN------TAVTKLDTATLQI--QYTWNITLLHKKVGDMFVVCGVLYVVDSVTD 750
IY + + ++KLD L I + TW L G+ F++CG+LY VD
Sbjct: 524 IYPSVDYDYSQQEVIVISKLDPNDLSIKKETTWKTGLKRNSYGNCFIICGILYAVDVYNQ 583
Query: 751 RNTNIRFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIRY 807
+ I +A D + + + L F N + TT I YN + K LY WD G+ LTY + +
Sbjct: 584 KEGMISYAYDTHTDTEADPKLPFINEYAFTTQIDYNPKEKVLYAWDNGHQLTYKVNF 640
>sp|Q9IAK4|NOE1_CHICK Noelin OS=Gallus gallus GN=OLFM1 PE=2 SV=1
Length = 485
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 6/238 (2%)
Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
FG+WM DP G ++ ++M + + + EYK F + ++ L P+ G VV
Sbjct: 246 FGSWMTDPLAPEGENKVWYMDSYHNNRFVREYKSMADFMNTDNFTSHRLPHPWSGTGQVV 305
Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
+N S Y++K S+ I++FDL + I+ +L N + G++ +D +DENGLW
Sbjct: 306 YNGSIYFNKYQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDENGLW 365
Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
+Y + N N ++KLD TLQ TWN + + G+ F++CG LYV + + T +
Sbjct: 366 AVYATNQNAGNIVISKLDPNTLQSLQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 424
Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
+A + + + F N +++ +M+ YN + + LY W+ G+ + Y + +H I S
Sbjct: 425 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 482
>sp|O88998|NOE1_MOUSE Noelin OS=Mus musculus GN=Olfm1 PE=1 SV=1
Length = 485
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 6/238 (2%)
Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
FG+WM DP G++ ++M + + EYK F + ++ L P+ G VV
Sbjct: 246 FGSWMTDPLAPEGDNRVWYMDGYHNNRFVREYKSMVDFMNTDNFTSHRLPHPWSGTGQVV 305
Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
+N S Y++K S+ I++FDL + I+ +L N + G++ +D +DENGLW
Sbjct: 306 YNGSIYFNKFQSHIIIRFDLKTEAILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDENGLW 365
Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
+Y + N N ++KLD +LQI TWN + + G+ F++CG LYV + + T +
Sbjct: 366 AVYATNQNAGNIVISKLDPVSLQILQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 424
Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
+A + + + F N +++ +M+ YN + + LY W+ G+ Y + +H I S
Sbjct: 425 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQTLYNVTLFHVIRS 482
>sp|Q62609|NOE1_RAT Noelin OS=Rattus norvegicus GN=Olfm1 PE=1 SV=1
Length = 485
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 6/238 (2%)
Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
FG+WM DP G++ ++M + + EYK F + ++ L P+ G VV
Sbjct: 246 FGSWMTDPLAPEGDNRVWYMDGYHNNRFVREYKSMVDFMNTDNFTSHRLPHPWSGTGQVV 305
Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
+N S Y++K S+ I++FDL + I+ +L N + G++ +D +DENGLW
Sbjct: 306 YNGSIYFNKFQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDENGLW 365
Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
+Y + N N ++KLD +LQI TWN + + G+ F++CG LYV + + T +
Sbjct: 366 AVYATNQNAGNIVISKLDPVSLQILQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 424
Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
+A + + + F N +++ +M+ YN + + LY W+ G+ Y + +H I S
Sbjct: 425 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQTLYNVTLFHVIRS 482
>sp|Q99784|NOE1_HUMAN Noelin OS=Homo sapiens GN=OLFM1 PE=1 SV=4
Length = 485
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 124/238 (52%), Gaps = 6/238 (2%)
Query: 580 FGAWMKDPHPTSGNSEKFWMTTDSDPTHLNEYKDKDMFKSDAKSWTYNLKEPFQGNAHVV 639
FG+WM DP G++ ++M + + EYK F + ++ L P+ G VV
Sbjct: 246 FGSWMTDPLAPEGDNRVWYMDGYHNNRFVREYKSMVDFMNTDNFTSHRLPHPWSGTGQVV 305
Query: 640 FNNSFYYHKKFSNSIVQFDLGSSKIINIVNLSTVDPNIKLYKT--GYNVMDFSLDENGLW 697
+N S Y++K S+ I++FDL + I+ +L N + G++ +D +DE+GLW
Sbjct: 306 YNGSIYFNKFQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDESGLW 365
Query: 698 VIYGLSNN--NTAVTKLDTATLQIQYTWNITLLHKKVGDMFVVCGVLYVVDSVTDRNTNI 755
+Y + N N V++LD +LQ TWN + + G+ F++CG LYV + + T +
Sbjct: 366 AVYATNQNAGNIVVSRLDPVSLQTLQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKV 424
Query: 756 RFALDLYKNDLLEVSLNFTNPFTNTTMITYNSRYKDLYTWDRGNSLTYPIR-YHEIDS 812
+A + + + F N +++ +M+ YN + + LY W+ G+ + Y + +H I S
Sbjct: 425 HYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRS 482
>sp|A2AX52|CO6A4_MOUSE Collagen alpha-4(VI) chain OS=Mus musculus GN=Col6a4 PE=1 SV=2
Length = 2309
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 90/174 (51%), Gaps = 23/174 (13%)
Query: 112 PGLQGPIGQKGEIGAKG---------------EMGVKGERGEKGAPGVVGPPGPQGIPGD 156
PG GP+G+ G +G +G E G G RGE G PG GP G QG PG
Sbjct: 1555 PGFHGPLGEAGSVGPRGSLGRHGLPGLKGVLGETGELGSRGEPGHPGPQGPRGRQGPPGF 1614
Query: 157 EGKR---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL-----D 208
G++ G +G+ G PGP G G +G RG KG++G G G G+ G G+PGL
Sbjct: 1615 FGQKGDPGTQGNPGLPGPSGSKGPDGPRGLKGEVGPAGERGPRGQQGPRGQPGLFGPDGH 1674
Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTP 262
G PGR G G PG G PG G G G GEKG G RG RG SG G+ GTP
Sbjct: 1675 GYPGRKGRKGEPGFPGYPGVQGEDGNPGRGGEKGAKGIRGKRGNSGFPGLAGTP 1728
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 93/178 (52%), Gaps = 16/178 (8%)
Query: 112 PGLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGP---PGPQG---IPGDEGKRGP 162
PGL+G +G+ GE+G++GE G +G RG +G PG G PG QG +PG G +GP
Sbjct: 1579 PGLKGVLGETGELGSRGEPGHPGPQGPRGRQGPPGFFGQKGDPGTQGNPGLPGPSGSKGP 1638
Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG-----RDGLPGEPGLDGIPGRNGMD 217
G G G G G+ G RG +G G PG G DG R G GEPG G PG G D
Sbjct: 1639 DGPRGLKGEVGPAGERGPRGQQGPRGQPGLFGPDGHGYPGRKGRKGEPGFPGYPGVQGED 1698
Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
G PG+ G G GI G G +G G+ G G++G G G G+ + R C ++
Sbjct: 1699 GNPGRGGEKGAKGIRGKRGNSGFPGLAGTPGDQGPPGKMGTKGSKGLA--DRTPCEIV 1754
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 86/156 (55%), Gaps = 10/156 (6%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
GL G G++G+ G +G G+ G RGE+G PGV GP G +G G++G G +G G G Q
Sbjct: 1432 GLPGHPGEEGDHGQRGPRGLPGLRGEEGCPGVRGPKGARGFSGEKGNPGEEGVGGLDGEQ 1491
Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMD----GIPGKDGL 225
G D G GP G+ G G GL G G GEPGL G PG G+D G G+ G
Sbjct: 1492 G---DRGAAGPSGEKGSSGSRGLTGLPGPAGPRGEPGLRGDPGDPGIDNLIQGPKGEKGR 1548
Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
G G PG +G GE G GPRG+ G+ G+ G+ G
Sbjct: 1549 RGHQGSPGFHGPLGEAGSVGPRGSLGRHGLPGLKGV 1584
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 113 GLQGPIGQKGEIGAKGEMG-------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
GL GP G +GE G +G+ G ++G +GEKG G G PG G G+ G GP+G
Sbjct: 1513 GLPGPAGPRGEPGLRGDPGDPGIDNLIQGPKGEKGRRGHQGSPGFHGPLGEAGSVGPRGS 1572
Query: 166 MG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
+G PG +G+ G+ G+ G +G+ G+PG G GR G PG G G PG G G+PG
Sbjct: 1573 LGRHGLPGLKGVLGETGELGSRGEPGHPGPQGPRGRQGPPGFFGQKGDPGTQGNPGLPGP 1632
Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G DG G G G G GPRG +G G G+ G
Sbjct: 1633 SGSKGPDGPRGLKGEVGPAGERGPRGQQGPRGQPGLFG 1670
Score = 93.2 bits (230), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 88/186 (47%), Gaps = 25/186 (13%)
Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
+GF G+ G G++G+ GA G G KG G +G G+ GP GP+G PG G
Sbjct: 1470 RGFSGEKGNPGEEGVGGLDGEQGDRGAAGPSGEKGSSGSRGLTGLPGPAGPRGEPGLRGD 1529
Query: 160 ----------RGPKGDMGYPGPQGIP------GDEGKRGPKGDMGYPGRIGLD------- 196
+GPKG+ G G QG P G+ G GP+G +G G GL
Sbjct: 1530 PGDPGIDNLIQGPKGEKGRRGHQGSPGFHGPLGEAGSVGPRGSLGRHGLPGLKGVLGETG 1589
Query: 197 --GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
G G PG PG G GR G G G+ G PG G PG G +G KG GPRG +G+ G
Sbjct: 1590 ELGSRGEPGHPGPQGPRGRQGPPGFFGQKGDPGTQGNPGLPGPSGSKGPDGPRGLKGEVG 1649
Query: 255 INGVPG 260
G G
Sbjct: 1650 PAGERG 1655
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 18/143 (12%)
Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
G+ G +GE G +GE+GE+G G+ G PG +G D G+RGP+G G G +G PG R
Sbjct: 1411 GDDGIRGEPGSRGEQGERGLDGLPGHPGEEG---DHGQRGPRGLPGLRGEEGCPG---VR 1464
Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
GPKG G+ G G PGE G+ G+DG G G G G G++G+ G
Sbjct: 1465 GPKGARGF------SGEKGNPGEEGV------GGLDGEQGDRGAAGPSGEKGSSGSRGLT 1512
Query: 242 GMTGPRGNRGKSGINGVPGTPAI 264
G+ GP G RG+ G+ G PG P I
Sbjct: 1513 GLPGPAGPRGEPGLRGDPGDPGI 1535
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 82/169 (48%), Gaps = 19/169 (11%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
P GL G G++G G +G G +G GEKG PG G G G GD G GP G+ G G
Sbjct: 1448 PRGLPGLRGEEGCPGVRGPKGARGFSGEKGNPGEEGVGGLDGEQGDRGAAGPSGEKGSSG 1507
Query: 171 PQGIPGDEGKRGPKGDMGY---PGRIGLD----------GRDGLPGEPGLDGIPGRNGM- 216
+G+ G G GP+G+ G PG G+D GR G G PG G G G
Sbjct: 1508 SRGLTGLPGPAGPRGEPGLRGDPGDPGIDNLIQGPKGEKGRRGHQGSPGFHGPLGEAGSV 1567
Query: 217 --DGIPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGNRGKSGINGVPG 260
G G+ GLPG G+ G G+ GE G GP+G RG+ G G G
Sbjct: 1568 GPRGSLGRHGLPGLKGVLGETGELGSRGEPGHPGPQGPRGRQGPPGFFG 1616
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 99 MQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
++G E P G QGP GQ G G G G G +G KG PG G PG QG G+ G
Sbjct: 1644 LKGEVGPAGERGPRGQQGPRGQPGLFGPDGH-GYPGRKGRKGEPGFPGYPGVQGEDGNPG 1702
Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
+ G KG G G +G G G G GD G PG++G G GL
Sbjct: 1703 RGGEKGAKGIRGKRGNSGFPGLAGTPGDQGPPGKMGTKGSKGL 1745
>sp|Q05722|CO9A1_MOUSE Collagen alpha-1(IX) chain OS=Mus musculus GN=Col9a1 PE=2 SV=2
Length = 921
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 104/189 (55%), Gaps = 30/189 (15%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
L M+G + E PG QG G++G+ G GE+G +G ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGITGIVGDKGEKG 484
Query: 141 APGVVGPPGPQGIPG---DEGKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
A G G PGPQGIPG D+G+RGP KGD G G +GIPG G PKGD G PG
Sbjct: 485 ARGFDGEPGPQGIPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSPG---PKGDTGLPG 541
Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
+DGRDG+PG PG G G+ G G G GLPG GIPG G GEKG TG G G
Sbjct: 542 ---VDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPG 598
Query: 252 KSGINGVPG 260
+ G +G PG
Sbjct: 599 QLGSSGKPG 607
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
E P G+ G G +G+ G GE G KG+RG +G+ G+ G P GPKGD G
Sbjct: 491 EPGPQGIPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSP------------GPKGDTG 538
Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
P G GIPG G +G G G PG +GL G G+PG PG G+ G G G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPG 598
Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
G G PG G GE G GPR G+RG G G PG P
Sbjct: 599 QLGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPG 640
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR--- 181
G G G+ G RG KGA G +G PG QG G+EG +G++G G QG PG +G R
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGD---QGELGEVGAQGPPGPQGLRGIT 474
Query: 182 ---------------GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---- 222
G G G PG G G+ G PGE G G G G GIPG
Sbjct: 475 GIVGDKGEKGARGFDGEPGPQGIPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSPGPK 534
Query: 223 --DGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
GLP G+DGIPG GT GE G GP G+ G G+ GVPG P E +
Sbjct: 535 GDTGLPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAP 594
Query: 278 SETSQL 283
+ QL
Sbjct: 595 GKPGQL 600
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG-- 155
+ G + PPG GP G +G G++G G G +G+ G PGV G G G+PG
Sbjct: 496 GIPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSPGPKGDTGLPGVDGRDGIPGMPGTK 555
Query: 156 -DEGKRGPKGDMGY---PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
+ GK GP GD+G PG GIPG +G G KG+ G PG+ G G G PG+ G G
Sbjct: 556 GEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKPGQQGPPGEV 615
Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
G G G+PG G G +G PG G G
Sbjct: 616 GPRGPRGLPGSRGPVGPEGSPGIPGKLG 643
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 84/175 (48%), Gaps = 21/175 (12%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
+ G + E PG G +G +G G G G KG GEKG G G PG G G
Sbjct: 547 GIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKP 606
Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG------------------LDGRD 199
G++GP G++G GP+G+PG G GP+G G PG++G + G
Sbjct: 607 GQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDR 666
Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGPRGNRG 251
G+ GEPG G G +G +G G G G G PG G+ GE G+ GP G RG
Sbjct: 667 GVFGEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGIRG 721
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 77/176 (43%), Gaps = 54/176 (30%)
Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
PG +G G+KG GA G ++G G+ G++G PG VGP GP+G+PG G GP+G G
Sbjct: 579 PGAKGVAGEKGNTGAPGKPGQLGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGI 638
Query: 169 PGP------------------------------------QGIPGDEGKRGPKGDMGYPGR 192
PG QG G+EG+ G +GD+G G+
Sbjct: 639 PGKLGSVGSPGLPGLPGPPGLPGMKGDRGVFGEPGPKGEQGASGEEGEAGARGDLGDMGQ 698
Query: 193 IGLDGRDGLPGEPGLDGIPGRNG---------------MDGIPGKDGLPGKDGIPG 233
G G G PGEPGL G G G M G G GLPG G PG
Sbjct: 699 PGPKGSVGNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGMQGEQGATGLPGIQGPPG 754
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG+ G G+ G+ G G++G++G G G PG G G +G G GK G G G PG
Sbjct: 549 PGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKPGQ 608
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------LDGIPGR 213
QG PG+ G RGP+G G G +G +G G+PG+ G + G G
Sbjct: 609 QGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDRGV 668
Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
G G G+ G G++G G G G+ G GP+G+ G G G+ G I
Sbjct: 669 FGEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGI 719
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 70/144 (48%), Gaps = 39/144 (27%)
Query: 112 PGLQGPIGQKGEIGAKGEMG------------------VKGERGEKGAPGVVGPPGPQGI 153
PG +GP+G +G G G++G +KG+RG G PG P G QG
Sbjct: 624 PGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLPGMKGDRGVFGEPG---PKGEQGA 680
Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---------E 204
G+EG+ G +GD+ GD G+ GPKG +G PG GL G +G+ G
Sbjct: 681 SGEEGEAGARGDL---------GDMGQPGPKGSVGNPGEPGLRGPEGIRGLPGVEGPRGP 731
Query: 205 PGLDGIPGRNGMDGIPGKDGLPGK 228
PG G+ G G G+PG G PG+
Sbjct: 732 PGPRGMQGEQGATGLPGIQGPPGR 755
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 12/81 (14%)
Query: 129 EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP--KGDMGYPGPQGIPGDEGKRGPKGD 186
+MG++G G KG PG +G GP+G G++G+RGP +G G PG G+PGD G
Sbjct: 812 QMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAIGLPGDPG------- 864
Query: 187 MGYPGRIGLDGRDGLPGEPGL 207
P G +GRDG G PG+
Sbjct: 865 ---PASYGKNGRDGEQGPPGV 882
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 20/91 (21%)
Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
+ G +G PG+ GPPG G+ RGPKGD+G G +G PG RGPKG
Sbjct: 812 QMGIRGLPGIKGPPGALGL------RGPKGDLGEKGERGPPG----RGPKG--------- 852
Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
L G GLPG+PG G+NG DG G G+
Sbjct: 853 LPGAIGLPGDPGPASY-GKNGRDGEQGPPGV 882
Score = 38.5 bits (88), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 18/84 (21%)
Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
G G PG +G PG G RGPKGD+G E G G PGR G G+PG
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDLG---------------EKGERGPPGR-GPKGLPGAI 857
Query: 224 GLPGKDGIP--GTNGTNGEKGMTG 245
GLPG G G NG +GE+G G
Sbjct: 858 GLPGDPGPASYGKNGRDGEQGPPG 881
Score = 38.1 bits (87), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
PPG G G KG++G KGE G G RG KG PG +G PG G P GK G G+ G PG
Sbjct: 824 PPGALGLRGPKGDLGEKGERGPPG-RGPKGLPGAIGLPGDPG-PASYGKNGRDGEQGPPG 881
>sp|Q801S8|CO6A1_XENLA Collagen alpha-1(VI) chain OS=Xenopus laevis GN=col6a1 PE=1 SV=1
Length = 1045
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 92/171 (53%), Gaps = 20/171 (11%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------------GIPGDEGK 159
PG G G+KGE G +G+ G G G++G G +GPPG G PGD+G+
Sbjct: 420 PGSNGLAGEKGESGDEGDAGADGSPGKRGEAGELGPPGVSGGRGARGEKGEPGPPGDQGR 479
Query: 160 RGPKGDMGYP------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
GP G G P GP+G GDEG RGP+G G G GL G G+ GE G DG PG
Sbjct: 480 DGPAGPFGDPGEAGPQGPKGYRGDEGPRGPEGPKGPRGAKGLPGEQGIAGERGDDGRPG- 538
Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV-PGTPA 263
NG DG PG G PG G PG+NGT G G G G +G+ G + V PG P
Sbjct: 539 NGTDGFPGFQGYPGSRGDPGSNGTKGYPGPKGDEGEQGEPGDDNVSPGPPG 589
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 108 EYCPPGL---QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
E PPG+ +G G+KGE G G+ G G G G PG GP GP+G GDEG RGP+G
Sbjct: 452 ELGPPGVSGGRGARGEKGEPGPPGDQGRDGPAGPFGDPGEAGPQGPKGYRGDEGPRGPEG 511
Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG--- 221
G G +G+PG++G G +GD G PG G DG G G PG G PG NG G PG
Sbjct: 512 PKGPRGAKGLPGEQGIAGERGDDGRPGN-GTDGFPGFQGYPGSRGDPGSNGTKGYPGPKG 570
Query: 222 ---KDGLPGKDGI-PGTNGTNGEKGM 243
+ G PG D + PG G G KG
Sbjct: 571 DEGEQGEPGDDNVSPGPPGPKGAKGY 596
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 89/182 (48%), Gaps = 30/182 (16%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG QG IG G G KG+ G++GE+G +GA G G G +GI G +G++G G G PG
Sbjct: 309 PGRQGDIGPVGYQGMKGDQGIRGEKGGRGAKGSKGDKGKRGIDGVDGQKGEDGYNGLPGC 368
Query: 172 QGIPGDE---GKRGPKGD------------------------MGYPGRIGLDGRDGLPGE 204
+G PG + G GPKGD G G G G +GL GE
Sbjct: 369 KGSPGFDGAPGSSGPKGDPGPYGTKGEKGVPGTPGTGGRPGNTGNTGDKGDPGSNGLAGE 428
Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---GTNGEKGMTGPRGNRGKSGINGVPGT 261
G G G G DG PGK G G+ G PG + G GEKG GP G++G+ G G G
Sbjct: 429 KGESGDEGDAGADGSPGKRGEAGELGPPGVSGGRGARGEKGEPGPPGDQGRDGPAGPFGD 488
Query: 262 PA 263
P
Sbjct: 489 PG 490
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 91/189 (48%), Gaps = 35/189 (18%)
Query: 98 AMQGFCNSTKEYCPP--GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQG 152
A QG C C P GL GP G G G G+ G+ G+RG G PG +GP G QG
Sbjct: 266 AEQGCCTYE---CKPSRGLSGPSGPPGYEGEIGKPGLPGDRGLPGDPGRQGDIGPVGYQG 322
Query: 153 IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG 212
+ GD+G RG KG G G +G D+GKRG G G G G +G G G PG DG PG
Sbjct: 323 MKGDQGIRGEKGGRGAKGSKG---DKGKRGIDGVDGQKGEDGYNGLPGCKGSPGFDGAPG 379
Query: 213 RNGMDGIPGKDGLPGK---------------------DGIPGTNGTNGEKGMTGPRGNRG 251
+G G PG G G+ G PG+NG GEKG + G+ G
Sbjct: 380 SSGPKGDPGPYGTKGEKGVPGTPGTGGRPGNTGNTGDKGDPGSNGLAGEKGES---GDEG 436
Query: 252 KSGINGVPG 260
+G +G PG
Sbjct: 437 DAGADGSPG 445
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKR--------- 160
G+ G GQKGE G G G KG G GAPG GP PGP G G++G
Sbjct: 349 GIDGVDGQKGEDGYNGLPGCKGSPGFDGAPGSSGPKGDPGPYGTKGEKGVPGTPGTGGRP 408
Query: 161 ---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
G GD G PG G+ G++G+ G +GD G G G G G G PG+ G G G
Sbjct: 409 GNTGNTGDKGDPGSNGLAGEKGESGDEGDAGADGSPGKRGEAGELGPPGVSGGRGARGEK 468
Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G PG G G+DG G G GE G GP+G RG G G G
Sbjct: 469 GEPGPPGDQGRDGPAGPFGDPGEAGPQGPKGYRGDEGPRGPEG 511
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 143 GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
G+ GP GP G G+ GK G PG +G+PGD G++G G +GY G
Sbjct: 280 GLSGPSGPPGYEGEIGK------PGLPGDRGLPGDPGRQGDIGPVGYQGM---------- 323
Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
G GI G G G G G GK GI G +G GE G G G +G G +G PG+
Sbjct: 324 --KGDQGIRGEKGGRGAKGSKGDKGKRGIDGVDGQKGEDGYNGLPGCKGSPGFDGAPGS 380
Score = 40.4 bits (93), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 34/71 (47%)
Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
GL G G PG G G PG G G+PG G G G G G G++G+ G +G RG
Sbjct: 280 GLSGPSGPPGYEGEIGKPGLPGDRGLPGDPGRQGDIGPVGYQGMKGDQGIRGEKGGRGAK 339
Query: 254 GINGVPGTPAI 264
G G G I
Sbjct: 340 GSKGDKGKRGI 350
>sp|Q9UEW3|MARCO_HUMAN Macrophage receptor MARCO OS=Homo sapiens GN=MARCO PE=1 SV=1
Length = 520
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 95/170 (55%), Gaps = 18/170 (10%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRGPK 163
GLQGP G G+ GA G G +GE+G KG G++GP G G +PG +G RG K
Sbjct: 205 GLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMK 264
Query: 164 GD---MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRN--- 214
GD MG PG QG GD G+ GP G G+PG G G+ GL PG PG G PG
Sbjct: 265 GDAGVMGPPGAQGSKGDFGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEP 324
Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
G G PG+ GLPG G PG G G KG TG +G +G+ G +GVPG +
Sbjct: 325 GSAGSPGRAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGV 374
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 102/193 (52%), Gaps = 21/193 (10%)
Query: 113 GLQGPIGQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGP------- 162
GL GP G+ G G KG++G+ KG+RG KG GV+GPPG QG GD G+ GP
Sbjct: 235 GLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQGSKGDFGRPGPPGLAGFP 294
Query: 163 --KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL---PGEPGLDGIPGRNGMD 217
KGD G PG QG+PG G G G G PG G GR GL PG PG G+ G G
Sbjct: 295 GAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGSKGDT 354
Query: 218 GIPGKDGLPGKDGIPGTNGTNGEK---GMTGPR---GNRGKSGINGVPGTPAICAYKRES 271
G+ G+ G G+ G+PG G GE+ G+ GP+ G G+ G GV G+ K E
Sbjct: 355 GLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPGQAGQKGDQGVKGSSGEQGVKGEK 414
Query: 272 CSLLPNSETSQLL 284
NS + +++
Sbjct: 415 GERGENSVSVRIV 427
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 86/176 (48%), Gaps = 33/176 (18%)
Query: 123 EIGAKGEMG---------------VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
E GAKG MG VKGE G +G G G G G PG +G++G KGD G
Sbjct: 176 EKGAKGAMGRDGATGPSGPQGPPGVKGEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGG 235
Query: 168 YPGPQ------------GIPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPG 212
GP+ G+PG +G RG KGD MG PG G G G PG PGL G PG
Sbjct: 236 LIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQGSKGDFGRPGPPGLAGFPG 295
Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G G PG G+PG PG G G KG G G+ G++G+ G PG+P K
Sbjct: 296 AKGDQGQPGLQGVPGP---PGAVGHPGAKGEPGSAGSPGRAGLPGSPGSPGATGLK 348
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
PPG QG G G G G G G +G++G PG+ G PGP G G G +G G G PG
Sbjct: 272 PPGAQGSKGDFGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPG 331
Query: 171 PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
G+PG G +G KGD G G+ G G G+PG G+ G G G+ G G G
Sbjct: 332 RAGLPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPG 391
Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
G+ G G G++GE+G+ G +G RG++ ++
Sbjct: 392 QAGQKGDQGVKGSSGEQGVKGEKGERGENSVS 423
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 52/132 (39%), Gaps = 33/132 (25%)
Query: 170 GPQGIPGDEG------------------KRGPKGDMG---------------YPGRIGLD 196
G QG PG +G ++G KG MG G GL
Sbjct: 148 GEQGAPGLQGHKGAMGMPGAPGPPGPPAEKGAKGAMGRDGATGPSGPQGPPGVKGEAGLQ 207
Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
G G PG+ G G PG G G G GL G G GT G G+ G+ G +G+RG G
Sbjct: 208 GPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDA 267
Query: 257 GVPGTPAICAYK 268
GV G P K
Sbjct: 268 GVMGPPGAQGSK 279
>sp|Q17RW2|COOA1_HUMAN Collagen alpha-1(XXIV) chain OS=Homo sapiens GN=COL24A1 PE=2 SV=2
Length = 1714
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 93/158 (58%), Gaps = 6/158 (3%)
Query: 112 PGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDEGKRGPKGD 165
PGL+G GQ+G E G +GE G+KGERG +G G G PGP GIPG +G GPKG
Sbjct: 1233 PGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGI 1292
Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
GY G GI G+ GK GP G G PG G GR GL G PG G+ G +G+ G PG G
Sbjct: 1293 QGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGP 1352
Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G+ G+PG G G++G G +G++G G G+ G P
Sbjct: 1353 KGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPG 1390
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 99/169 (58%), Gaps = 15/169 (8%)
Query: 113 GLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGPPGP---QGIPGDEGKRGPK 163
G+QG G+KG+ G +G G+ GERG +G PG+ G PG +G+PG+ G RG +
Sbjct: 939 GIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQ 998
Query: 164 GDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
GD+G PG G+ PG EG+ G +G+ G G +G G G GEPGL G PG G +G+
Sbjct: 999 GDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQ 1058
Query: 221 GKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
GKDGL PG G+PG +G GE G+ G G G+SG G+PG I
Sbjct: 1059 GKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVG 1107
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 91/189 (48%), Gaps = 27/189 (14%)
Query: 97 VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV----------- 145
V QG E P GL G +G G IG KGE G G G +G GV+
Sbjct: 842 VGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGP 901
Query: 146 -------------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
GPPG QG G G RGP G +G G QG G++G +G +G G G+
Sbjct: 902 IGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGK 961
Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
G G G G+PGL G+PG G G+PG+ PG G+ G G GE GM GP G G+
Sbjct: 962 TGNPGERGFQGKPGLQGLPGSTGDRGLPGE---PGLRGLQGDVGPPGEMGMEGPPGTEGE 1018
Query: 253 SGINGVPGT 261
SG+ G PG
Sbjct: 1019 SGLQGEPGA 1027
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
+QG ST + PG G G +G++G GEMG++G G +G G+ G PG +G G
Sbjct: 975 GLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTA 1034
Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI------- 210
G G G+ G G G PG+EG +G G G PG GL G DG GE GL GI
Sbjct: 1035 GSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRS 1094
Query: 211 -----PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
PG G+ GIPG+ G PGK G G G GE G GP G GKSG G GT
Sbjct: 1095 GQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAV 1154
Query: 266 AY 267
+
Sbjct: 1155 GH 1156
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 92/180 (51%), Gaps = 27/180 (15%)
Query: 115 QGPIGQKGEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
QG G+ G G KG +GV G RG ++G PG G G QG+ G+ G G KG G PGP
Sbjct: 1215 QGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGP 1274
Query: 172 QG---IPGDEGKRGPKGDMGY---------PGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
G IPG +G GPKG GY PG+IG G+ GL PG+ G PGR G+ G
Sbjct: 1275 SGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGL---PGIRGGPGRTGLAGA 1331
Query: 220 PGKDGLPGKDGIPGTNGTNGEK---------GMTGPRGNRGKSGINGVPGTPAICAYKRE 270
PG G+ G G+PG+ G G K G+ G RG+RG G G G P + E
Sbjct: 1332 PGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGE 1391
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 94/206 (45%), Gaps = 51/206 (24%)
Query: 97 VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------------- 143
V + G +T + PPG G +GE G KGE G +G +G+KGAPG
Sbjct: 1230 VGVPGLRGATGQQGPPGEPG---DQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGL 1286
Query: 144 --------------------VVGPPGPQGIPGDEGKRGPKGDMGYPGP------QGIPGD 177
+GPPG QG+PG G G G G PGP G+PG
Sbjct: 1287 LGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGS 1346
Query: 178 EGKRGPKGDMGYPGRIGLDGR---------DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
G +GPKG+ G PG+ G+ G+ G G+PGL G PG G+ G+ G G PG
Sbjct: 1347 PGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGP 1406
Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSG 254
G G G G G GP G+RG +G
Sbjct: 1407 KGPEGDAGIVGISGPKGPIGHRGNTG 1432
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 94/189 (49%), Gaps = 16/189 (8%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEM-------------GVKGERGEKGAPGV 144
+ G+ + P GL GP G+KG G + G +GERGE GA G
Sbjct: 1167 GIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGY 1226
Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
G G G+ G G++GP G+ G G QG+ G+ G G KG G PG G G GL G
Sbjct: 1227 KGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGL 1286
Query: 205 PGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
G GI G +G DGI PGK G PGK G+PG G G G+ G G G G +G+PG+
Sbjct: 1287 LGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGS 1346
Query: 262 PAICAYKRE 270
P I K E
Sbjct: 1347 PGIQGPKGE 1355
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PGL GP G KG+ G V GE+G++G G++GPPG QG D+G +G G G PG
Sbjct: 527 PGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQG---DKGLKGHPGLPGLPGE 583
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
QGIPG G G GYPGR GL G +G PG G G G G G G +G G GI
Sbjct: 584 QGIPGFAGN---IGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGI 640
Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G G +G G G+RG +G++G PG
Sbjct: 641 RGKKGFKGRQGFPGDFGDRGPAGLDGSPG 669
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 96/207 (46%), Gaps = 46/207 (22%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------PGPQGI---PGDEGKR 160
GLQG G KG G +G G GE+GE G PG++GP PGP+GI PG G+
Sbjct: 1056 GLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRP 1115
Query: 161 GPKGDMGYPGP------QGIPGDEGKRGPK------GDMGYPGRIGLDGRDGLPGEPGLD 208
G KGD G GP +G PG GK GPK G +G+ G +G DG G+PG G
Sbjct: 1116 GKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQ 1175
Query: 209 GIPGRNGMDGIPGKDGLPGKD----------------------GIPGTNGTNGEKGMTGP 246
G PG +G+ G G+ G PG+D G PG G G G+ G
Sbjct: 1176 GQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGL 1235
Query: 247 RGNRGKSGINGVPGTPAICAYKRESCS 273
RG G+ G G PG K E S
Sbjct: 1236 RGATGQQGPPGEPGDQGEQGLKGERGS 1262
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 96/184 (52%), Gaps = 24/184 (13%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPG---------VVGPPGPQGIPGDEGKR 160
GLQG G KG++G G +G GE RGE GAPG + G PG +G+PG++G+
Sbjct: 1020 GLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGE- 1078
Query: 161 GPKGDMGYP---------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
KG+MG P G G+PG EG G G G PG+ G G+ G GE G G P
Sbjct: 1079 --KGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPP 1136
Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
G+ G G G G G G G G +GE G+ G RG++G+ G +G+PG Y E
Sbjct: 1137 GKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGED 1196
Query: 272 CSLL 275
++L
Sbjct: 1197 STVL 1200
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 97 VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
V G T E PGL+G G GE G +G+ G+KG G +G PG G G G+PG
Sbjct: 1031 VGTAGSVGGTGE---PGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGI 1087
Query: 157 EGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
G G G G PGP+ GIPG G+ G KGD G G G G G PG+ G G G
Sbjct: 1088 IGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGA 1147
Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G G GL G DG PG G G +G GP G G G G PG
Sbjct: 1148 RGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPG 1194
Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 90/172 (52%), Gaps = 21/172 (12%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
GL GP G +G+ G KG G+ G GE+G PG G G G PG +G GP+G+ G G Q
Sbjct: 558 GLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQ 617
Query: 173 GI---PGDEGKRGPKGDMGYPG---RIGLDGRDGLPGE------PGLDGIPG-------- 212
G PG+ G+ GP+G+ G PG + G GR G PG+ GLDG PG
Sbjct: 618 GFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPP 677
Query: 213 -RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G+ G G G G GIPG G +G KG+ G +G++G+ G G G P
Sbjct: 678 GFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPG 729
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 72/132 (54%), Gaps = 12/132 (9%)
Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG--- 194
++G G+ GP G G+PG G +GPKGD G+ Q +PG++G +G G MG PG G
Sbjct: 511 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKG 570
Query: 195 LDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTN------GEKGMTG 245
L G GLPG PG GIPG G G PG+ GL G +G PG G GE G G
Sbjct: 571 LKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLG 630
Query: 246 PRGNRGKSGING 257
P G RG GI G
Sbjct: 631 PEGERGIPGIRG 642
Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
L QG + G +G GQKG G G G+KGE G++G G +G GP G+PG
Sbjct: 802 LKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPG 861
Query: 156 D---EGKRGPKGDMGYPGPQG------------------------IPGDEGKRGPKGDMG 188
+ G G KG+ G PGP G +PG G RGP G G
Sbjct: 862 EVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQG 921
Query: 189 YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
G+ G G DGL GE G+ G G G G G GL GK G PG G G+ G+ G G
Sbjct: 922 PKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPG 981
Query: 249 NRGKSGINGVPG 260
+ G G+ G PG
Sbjct: 982 STGDRGLPGEPG 993
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 92/184 (50%), Gaps = 39/184 (21%)
Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
L+G G++G IGA GE+G +G+ G+KG G PGP+G+ G+ G +G G +G GP G
Sbjct: 802 LKGTQGEEGPIGAFGELGPRGKPGQKG---YAGEPGPEGLKGEVGDQGNIGKIGETGPVG 858
Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDG------------------LPGEPGLDGIPG 212
+PG+ G G KG+ G PG +G G G LPG G G PG
Sbjct: 859 LPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPG 918
Query: 213 RN---GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP------------RGNRGKSGING 257
G G G DGL G+ GI G G G++G GP RG +GK G+ G
Sbjct: 919 SQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQG 978
Query: 258 VPGT 261
+PG+
Sbjct: 979 LPGS 982
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQG 152
++ G T P G+ G GQ+G G KG++G GE G +G PG +G GP+G
Sbjct: 1087 IIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKG 1146
Query: 153 IPGDEGK------RGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGR----------- 192
G G GP G+ G P G QG PG G GPKG+ GYPG
Sbjct: 1147 ARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPR 1206
Query: 193 --IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
G G G GEPG +G G G+ G+ G G G G PG G G KG G GN+
Sbjct: 1207 GEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNK 1266
Query: 251 GKSGINGVPGTPAICAYK 268
GK G G G P I +
Sbjct: 1267 GKKGAPGPSGKPGIPGLQ 1284
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG++G G+ G GA G GVKG G G+PG+ GP G QG+PG G +G +G G G
Sbjct: 1317 PGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGD 1376
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
QG GD G +G G+ G GL G G PG G +G G G+ G G G G G
Sbjct: 1377 QGPCGDPGLKGQPGEYGV---QGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGP 1433
Query: 232 PGTNGTNGEKGMTGPRGNRG 251
G G G G TGPRG +G
Sbjct: 1434 LGREGIIGPTGRTGPRGEKG 1453
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 105/268 (39%), Gaps = 78/268 (29%)
Query: 97 VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGI 153
+ G+ P G GP G +G IG+ GE G G GE+G PG+ G G QG
Sbjct: 593 IGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGF 652
Query: 154 PGDEGKRGPKGDMGYPG------------------------PQGIPG------------- 176
PGD G RGP G G PG P GIPG
Sbjct: 653 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGI 712
Query: 177 --DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD----------------- 217
D+G++G G++G PG G G GLPG PG+ G G +G
Sbjct: 713 KGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGF 772
Query: 218 ----GIPGKDGLPGKDGIPGT---------NGTNGEK------GMTGPRGNRGKSGINGV 258
GIPG++G G G+ G GT GE+ G GPRG G+ G G
Sbjct: 773 PGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGE 832
Query: 259 PGTPAICAYKRESCSLLPNSETSQLLIP 286
PG + + ++ ET + +P
Sbjct: 833 PGPEGLKGEVGDQGNIGKIGETGPVGLP 860
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 84/180 (46%), Gaps = 33/180 (18%)
Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
PG GP G KG +G +G G +KG +GE+G G G GP+G PG KG G
Sbjct: 779 PGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQ------KGYAGE 832
Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
PGP+G+ +G GD G G+IG G GLPGE G+ G G G G PG G G+
Sbjct: 833 PGPEGL------KGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGE 886
Query: 229 DGI------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
G+ PG G G G GP+G RG G +G+ G I K E
Sbjct: 887 KGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGE 946
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 9/113 (7%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGY 168
PG+QGP KGE G G+ G++G+RG +GA G GP PG +G PG+ G +G G G+
Sbjct: 1347 PGIQGP---KGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGF 1403
Query: 169 PGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
PGP+G GD G GPKG +G+ G G GR+G+ G G G G G G
Sbjct: 1404 PGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGEKGFRG 1456
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 88/182 (48%), Gaps = 39/182 (21%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG-------------------- 152
GL G G KGE G GE+G G G+KGA G+ GPPG +G
Sbjct: 708 GLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPP 767
Query: 153 ----------IPGDEGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
IPG G GPKG +G PGP G+ G +G+ GP G G G G G+
Sbjct: 768 GPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQK 827
Query: 200 GLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
G GEPG +G+ G G G GK GLPG+ G+ G+ G GE+G GP G +G+
Sbjct: 828 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEK 887
Query: 254 GI 255
G+
Sbjct: 888 GV 889
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP- 171
G QGP G G G GE GV+G G +G PG GP G GI G G +GP G G GP
Sbjct: 1375 GDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPL 1434
Query: 172 --QGIPGDEGKRGPKGDMGYPGR 192
+GI G G+ GP+G+ G+ G
Sbjct: 1435 GREGIIGPTGRTGPRGEKGFRGE 1457
Score = 37.4 bits (85), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 42/85 (49%), Gaps = 15/85 (17%)
Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
KRGP+G + G G PG PGL PG G G PG PG+ +PG G G
Sbjct: 511 KRGPRG---------IPGPHGNPGLPGL---PGPKGPKGDPGFS--PGQP-VPGEKGDQG 555
Query: 240 EKGMTGPRGNRGKSGINGVPGTPAI 264
G+ GP G +G G+ G PG P +
Sbjct: 556 LSGLMGPPGMQGDKGLKGHPGLPGL 580
>sp|Q96P44|COLA1_HUMAN Collagen alpha-1(XXI) chain OS=Homo sapiens GN=COL21A1 PE=2 SV=1
Length = 957
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV------VGPPGPQGIPGDEGKRGPKGD 165
PGL GP G+ G G G MG G +GE G+PG G PG G PG+ G G KG+
Sbjct: 562 PGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGE 621
Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
+G PG QG G G G G G PG+ G G G GEPG+ G+PG +G+ G PG G
Sbjct: 622 IGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGSKGEPGIQGMPGASGLKGEPGATGS 681
Query: 226 PGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
PG+ G+PG G G+KG G +G +G+ G NG G P
Sbjct: 682 PGEPGYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPG 722
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 89/158 (56%), Gaps = 9/158 (5%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG+ G G +G +G KGE+G G++G+KGAPG+ G G G PG G G KG G PG
Sbjct: 604 PGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGSKGEPGI 663
Query: 172 QGIPGDEGKRGPKGD---------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
QG+PG G +G G MG PG G G G GE G+ G G NG GIPG+
Sbjct: 664 QGMPGASGLKGEPGATGSPGEPGYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQ 723
Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G+ G G G G GE G+ G G++G+SG++G+ G
Sbjct: 724 QGIQGHHGAKGERGEKGEPGVRGAIGSKGESGVDGLMG 761
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 96/193 (49%), Gaps = 42/193 (21%)
Query: 110 CPPG---LQGPI------------GQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQ 151
CPPG LQGP GQ G+ G G G+ G G G+PG+ G PG +
Sbjct: 446 CPPGKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYK 505
Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG------RIGLDGRDGLPGEP 205
G PG +G +G +G G+PG G+PG +G+ G KGD G PG G G G PG P
Sbjct: 506 GEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLP 565
Query: 206 GLDGIPGRNGMDGI---------------PGKDGL---PGKDGIPGTNGTNGEKGMTGPR 247
G G PGR+G DG+ PG+DG PG G PG G G+KG GP
Sbjct: 566 GPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPP 625
Query: 248 GNRGKSGINGVPG 260
G +GK G G+PG
Sbjct: 626 GQQGKKGAPGMPG 638
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 89/167 (53%), Gaps = 18/167 (10%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
PGL G G KGE+GAKG+ G G E+G G PG+ PGP G PG GK G
Sbjct: 523 PGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGL---PGPAGEPGRHGKDGL 579
Query: 163 KGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
G G+ G G PG +G RG G G+PG GL G+ G G PG G G GM G+
Sbjct: 580 MGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGL 639
Query: 220 PGKDGLPGKDGIPGTNGTNGE---KGMTGPRGNRGKSGINGVPGTPA 263
G +G PG+ G PG+ G+ GE +GM G G +G+ G G PG P
Sbjct: 640 MGSNGSPGQPGTPGSKGSKGEPGIQGMPGASGLKGEPGATGSPGEPG 686
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 93/198 (46%), Gaps = 39/198 (19%)
Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
QG + PG+QG +G G KGE G G++G++G PG PG G+PG +G+
Sbjct: 481 QGIAGTPGVPGSPGIQG---ARGLPGYKGEPGRDGDKGDRGLPGF---PGLHGMPGSKGE 534
Query: 160 RGPKGDMGYPGP---------------QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
G KGD G PG G+PG G+ G G G G G G G PG
Sbjct: 535 MGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGA 594
Query: 205 PGLDGIPGRNGMDGIP------------------GKDGLPGKDGIPGTNGTNGEKGMTGP 246
PG DG G G+ G P GK G PG G+ G+NG+ G+ G G
Sbjct: 595 PGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGS 654
Query: 247 RGNRGKSGINGVPGTPAI 264
+G++G+ GI G+PG +
Sbjct: 655 KGSKGEPGIQGMPGASGL 672
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 79/173 (45%), Gaps = 33/173 (19%)
Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
G G +G KG PG+ G PG G PG +GK G +G G PG G PG +G RG G G P
Sbjct: 449 GKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYKGEP 508
Query: 191 GRIGLDGRDGLPGEPGLDGIPGRN---------------------------GMDGIPGKD 223
GR G G GLPG PGL G+PG G G+PG
Sbjct: 509 GRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPA 568
Query: 224 GLP---GKDGI---PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
G P GKDG+ PG G G G G G RG+ GI G PG + K E
Sbjct: 569 GEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGE 621
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 41/96 (42%), Gaps = 34/96 (35%)
Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR------------- 247
LPG PG DG+P G+ G+PG+ G+ G G+PG NG G +G P
Sbjct: 844 LPGLPGRDGVP---GLVGVPGRPGVRGLKGLPGRNGEKGSQGFGYPGEQGPPGPPGPEGP 900
Query: 248 ------------------GNRGKSGINGVPGTPAIC 265
G+ GK GI G PG P IC
Sbjct: 901 PGISKEGPPGDPGLPGKDGDHGKPGIQGQPGPPGIC 936
>sp|Q9JMH4|COHA1_MESAU Collagen alpha-1(XVII) chain OS=Mesocricetus auratus GN=COL17A1
PE=2 SV=1
Length = 1431
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 96/185 (51%), Gaps = 35/185 (18%)
Query: 112 PGLQGPIGQKG--------------EIGAKGEMGVKGERGEKGAPGVVGPPGP------- 150
PG++GPIGQ+G G KG+ G+ GE+G +G PGV G GP
Sbjct: 617 PGMEGPIGQRGLEGPMGPRGEPGPPGSGEKGDRGIAGEQGPRGLPGVPGSVGPRGPNGSP 676
Query: 151 -----------QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
QG+ G+ G G KGD G GP G GD+G++GP+G G PG GL G
Sbjct: 677 GPQGPPGSTGPQGLRGEVGLPGVKGDKGLAGPPGPKGDQGEKGPRGLTGEPGVRGLPGAV 736
Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
G PG G G G +G G G+ GL PG G+PG +G G+ G+TGP+G +G G
Sbjct: 737 GEPGAKGAMGPAGPDGQQGPRGEQGLTGMPGTRGLPGPSGDPGKPGVTGPQGPQGLPGSP 796
Query: 257 GVPGT 261
G PGT
Sbjct: 797 GRPGT 801
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 80/136 (58%), Gaps = 15/136 (11%)
Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
G +GE+G+ G +G+KG + GPPGP+G D+G++GP+G G PG +G+PG G+ G K
Sbjct: 689 GLRGEVGLPGVKGDKG---LAGPPGPKG---DQGEKGPRGLTGEPGVRGLPGAVGEPGAK 742
Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
G M G G DG+ G GE GL G+PG G+ PG G PGK PG G G +G+
Sbjct: 743 GAM---GPAGPDGQQGPRGEQGLTGMPGTRGL---PGPSGDPGK---PGVTGPQGPQGLP 793
Query: 245 GPRGNRGKSGINGVPG 260
G G G G G PG
Sbjct: 794 GSPGRPGTKGEPGAPG 809
Score = 86.7 bits (213), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 87/203 (42%), Gaps = 59/203 (29%)
Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP----------- 169
+G G KG+MG +G +G++G PG G PGP G PG EG +G KG +G P
Sbjct: 569 RGNPGPKGDMGSQGPKGDRGLPGTAGIPGPLGHPGPEGPKGQKGSIGDPGMEGPIGQRGL 628
Query: 170 ---------------------------GPQGIPGDEGKRGP------------------- 183
GP+G+PG G GP
Sbjct: 629 EGPMGPRGEPGPPGSGEKGDRGIAGEQGPRGLPGVPGSVGPRGPNGSPGPQGPPGSTGPQ 688
Query: 184 --KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
+G++G PG G G G PG G G G G+ G PG GLPG G PG G G
Sbjct: 689 GLRGEVGLPGVKGDKGLAGPPGPKGDQGEKGPRGLTGEPGVRGLPGAVGEPGAKGAMGPA 748
Query: 242 GMTGPRGNRGKSGINGVPGTPAI 264
G G +G RG+ G+ G+PGT +
Sbjct: 749 GPDGQQGPRGEQGLTGMPGTRGL 771
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
++G + E G GP G G+ G +GE G+ G G +G PG G PG G+ G +
Sbjct: 728 GVRGLPGAVGEPGAKGAMGPAGPDGQQGPRGEQGLTGMPGTRGLPGPSGDPGKPGVTGPQ 787
Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
GPQG+PG G+ G KG+ G PGR+
Sbjct: 788 ------------GPQGLPGSPGRPGTKGEPGAPGRV 811
>sp|P20785|CO6A1_CHICK Collagen alpha-1(VI) chain OS=Gallus gallus GN=COL6A1 PE=2 SV=1
Length = 1019
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 89/172 (51%), Gaps = 34/172 (19%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGDM 166
G+ G G+KG G +GE G GE G++G+PG GPPG +G PG G RGP+GD+
Sbjct: 384 GIPGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPGDRGPRGDL 443
Query: 167 GYPGPQG------------------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
G PGP G GD+G RG +G G PG GL G GL
Sbjct: 444 GEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPGAPGLPGDPGLM 503
Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
GE G DG PG NG G PG G G G PG NGT KG GP+G+ G++G
Sbjct: 504 GERGEDGPPG-NGTIGFPGAPGQQGDRGDPGINGT---KGYVGPKGDEGEAG 551
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 80/163 (49%), Gaps = 28/163 (17%)
Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGYPGPQGIPGDEGKR 181
G G G+ G GEKGAPG G PGP G GDEG GP G+ G G +G PG G R
Sbjct: 378 GKPGRQGIPGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPGDR 437
Query: 182 GPKGDMGYPGRIGLDGR------------------------DGLPGEPGLDGIPGRNGMD 217
GP+GD+G PG G GR DG G G G PG G+
Sbjct: 438 GPRGDLGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPGAPGLP 497
Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G PG G G+DG PG NGT G G G +G+RG GING G
Sbjct: 498 GDPGLMGERGEDGPPG-NGTIGFPGAPGQQGDRGDPGINGTKG 539
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 82/174 (47%), Gaps = 33/174 (18%)
Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
+GE G G G KG+ G+ G PG +GP G QG+ GD+G RG KG G +G G++G
Sbjct: 265 HEGERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKGDKGSRGEKGSRG---AKGAKGEKG 321
Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI---------------------------PG 212
KRG G G G G G G G PG DG PG
Sbjct: 322 KRGIDGIDGMKGEAGYPGLPGCKGSPGFDGTQGPPGPKGDPGAYGPKGGKGEPGEDGKPG 381
Query: 213 RNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
R G+ G PG+ G PG G PG G G++ G GP G RG +G G PG+P
Sbjct: 382 RQGIPGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPG 435
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD--MGYPGPQGIPGDEGKRGPK 184
+G+ G +G G KG+PG G PG G+ G+ G+ GP G+ +G+P G PG +G RG
Sbjct: 476 RGDDGPRGNEGPKGSPGAPGLPGDPGLMGERGEDGPPGNGTIGFP---GAPGQQGDRGDP 532
Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDG-IPGRNGMDGIPG 221
G G G +G G +G G+PG D G +G+ G G
Sbjct: 533 GINGTKGYVGPKGDEGEAGDPGNDNPTAGPSGIKGAKG 570
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG--VVGPPGPQGIPGDEGKRGPKGDMGY 168
P G +GP G G G G+ G+ GERGE G PG +G PG G GD G G G GY
Sbjct: 481 PRGNEGPKGSPGAPGLPGDPGLMGERGEDGPPGNGTIGFPGAPGQQGDRGDPGINGTKGY 540
Query: 169 PGPQGIPGDEGKRG-PKGDMGYPGRIGLDGRDG 200
GP+ GDEG+ G P D G G+ G G
Sbjct: 541 VGPK---GDEGEAGDPGNDNPTAGPSGIKGAKG 570
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
G G+ GLPG+ G G PGR G G G G+ G G + G G +G G +G +GK
Sbjct: 267 GERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKGDKG---SRGEKGSRGAKGAKGEKGKR 323
Query: 254 GINGVPGTPAICAY 267
GI+G+ G Y
Sbjct: 324 GIDGIDGMKGEAGY 337
Score = 37.7 bits (86), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-PGPQGIPGDEGKR 160
PG QG G G G KG +G KG+ GE G PG P GP GI G +G R
Sbjct: 523 PGQQGDRGDPGINGTKGYVGPKGDEGEAGDPGNDNPTAGPSGIKGAKGHR 572
>sp|P23206|COAA1_BOVIN Collagen alpha-1(X) chain OS=Bos taurus GN=COL10A1 PE=2 SV=1
Length = 674
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYP 169
G +GP+G G GAKGE G G GE G PG +GP GP+GIPG+ G GPKG+MG
Sbjct: 308 GQRGPVGLPGSPGAKGEQGPAGHPGEAGLPGPSGNMGPQGPKGIPGNPGLPGPKGEMGPV 367
Query: 170 GPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
GP G PG +G+RG G GYPG GL+G G PG PG G PG G G+PG G
Sbjct: 368 GPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGIAGSPGLPGPVGPA 427
Query: 227 GKDGIPGTNGTNGEKGMTGPRGNR 250
G G+PG NG G +G+ G G R
Sbjct: 428 GAKGVPGHNGEAGPRGVPGIPGTR 451
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 86/156 (55%), Gaps = 12/156 (7%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PGL G GQ+G +G G G KGE+G G PG G +PG G GP+G G PG
Sbjct: 301 PGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPGEAG------LPGPSGNMGPQGPKGIPGN 354
Query: 172 QGIPGDEGKRGPKGDMGYP------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
G+PG +G+ GP G G P G GLDG+ G PGEPGL+G G G+ G G G+
Sbjct: 355 PGLPGPKGEMGPVGPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGI 414
Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
G G+PG G G KG+ G G G G+ G+PGT
Sbjct: 415 AGSPGLPGPVGPAGAKGVPGHNGEAGPRGVPGIPGT 450
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 115 QGP--IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG-----------------PQGIPG 155
QGP IG+ G G G+ G+ G +G+ GAPG G PG P G+PG
Sbjct: 258 QGPEGIGKPGAPGIPGQPGIPGMKGQPGAPGTAGLPGAPGFGKPGLPGLKGQRGPVGLPG 317
Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
G +G +G G+PG G+PG G GP+G G PG GL G G G G G PG G
Sbjct: 318 SPGAKGEQGPAGHPGEAGLPGPSGNMGPQGPKGIPGNPGLPGPKGEMGPVGPAGNPGAKG 377
Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G DG PG G PG NG G G+ GP+G+ G +G G+PG
Sbjct: 378 ERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGIAGSPGLPG 422
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 135 ERGEKGAPGVVGPPGPQGIPGDEG------------KRGPKGDMGYPGPQGIPGDEGKRG 182
+RGE G PG G G QG+PG+ G ++GP+G +G PG GIPG G G
Sbjct: 221 KRGENGLPGQPGLKGDQGVPGERGAAGPSGPQGPPGEQGPEG-IGKPGAPGIPGQPGIPG 279
Query: 183 PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
KG G PG GL G G G+PGL G+ G+ G G+PG PG G G G GE G
Sbjct: 280 MKGQPGAPGTAGLPGAPGF-GKPGLPGLKGQRGPVGLPGS---PGAKGEQGPAGHPGEAG 335
Query: 243 MTGPRGNRGKSGINGVPGTPAICAYKRESCSLLP 276
+ GP GN G G G+PG P + K E + P
Sbjct: 336 LPGPSGNMGPQGPKGIPGNPGLPGPKGEMGPVGP 369
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 81/175 (46%), Gaps = 25/175 (14%)
Query: 119 GQKGEIGAKGEMGVKGERGEK-----------------GAPGVVGPPGPQGIPGDEGKRG 161
G G+ G KG+ GV GERG G PG G PG GIPG +G+ G
Sbjct: 226 GLPGQPGLKGDQGVPGERGAAGPSGPQGPPGEQGPEGIGKPGAPGIPGQPGIPGMKGQPG 285
Query: 162 PKGDMGYPGPQG-----IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR--- 213
G G PG G +PG +G+RGP G G PG G G G PGE GL G G
Sbjct: 286 APGTAGLPGAPGFGKPGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPGEAGLPGPSGNMGP 345
Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G GIPG GLPG G G G G G G RG+ G G G PG P + K
Sbjct: 346 QGPKGIPGNPGLPGPKGEMGPVGPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPK 400
>sp|P20849|CO9A1_HUMAN Collagen alpha-1(IX) chain OS=Homo sapiens GN=COL9A1 PE=1 SV=3
Length = 921
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 106/189 (56%), Gaps = 30/189 (15%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKG 140
L M+G + E PG QG G++G+ G GE+G +G ++GEKG
Sbjct: 425 LPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKG 484
Query: 141 APGVVGPPGPQGI---PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
A G+ G PGPQG+ PGD+G+R GPKGD G G +GIPG GPKGD G P
Sbjct: 485 ARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP---GPKGDTGLP- 540
Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
G+DGRDG+PG PG G PG+ G G G GLPG GIPG G GEKG TG G G
Sbjct: 541 --GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598
Query: 252 KSGINGVPG 260
+ G +G PG
Sbjct: 599 QMGNSGKPG 607
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
E P GL G G +G+ G GE G KG+RG +GA G+ G P GPKGD G
Sbjct: 491 EPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLP------------GPKGDTG 538
Query: 168 YP---GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
P G GIPG G +G G G PG GL G G+PG PG G+ G G G PGK G
Sbjct: 539 LPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPG 598
Query: 225 LPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPA 263
G G PG G GE G GP+ G+RG+ G G PG P
Sbjct: 599 QMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPG 640
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
G G G+ G RG KGA G +G PG QG G+EG +G G++G GP G G G G
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV 477
Query: 185 GDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
GD G G GLDG GLPG PG G G G G G G G GIPG G G+
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDT 537
Query: 242 GMTGPRGNRGKSGINGVPGT 261
G+ G G+ GI G+PGT
Sbjct: 538 GLP---GVDGRDGIPGMPGT 554
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
G+PG G +G KG++G PG QG G+EG D G G +G G G G G+ GI
Sbjct: 424 GLPGMRGHKGAKGEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLRGITGIV 477
Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEK---GMTGPRGNRGKSGINGVPGTPA 263
G G G G DG PG G+PG G G++ G GP+G+RG G G+PG P
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPG 532
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
+ G + PPG GP G +G GA+G G+ G +G+ G PGV G G G+PG +
Sbjct: 496 GLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTK 555
Query: 158 GKRGP------KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
G+ G G G PG GIPG +G G KG G PG+ G G G PG+ G G
Sbjct: 556 GEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEV 615
Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNG 236
G G G+PG G G G PG G
Sbjct: 616 GPRGPQGLPGSRGELGPVGSPGLPG 640
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 88/193 (45%), Gaps = 48/193 (24%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
GLQG G G GAKG V GE+G GAPG PG G G G++GP G++G GPQ
Sbjct: 568 GLQGLPGVPGIPGAKG---VAGEKGSTGAPGK---PGQMGNSGKPGQQGPPGEVGPRGPQ 621
Query: 173 GIPGDEGKRGPKGDMGYPGR------------------IGLDGRDGLPGEPGLDGIPGRN 214
G+PG G+ GP G G PG+ G+ G G+ GEPG G G +
Sbjct: 622 GLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGAS 681
Query: 215 GMD------------GIPGKDGLPGKDGIPGTNGTNGEKGM------------TGPRGNR 250
G + G+PG G G G PG G G +G+ G +G +
Sbjct: 682 GEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQ 741
Query: 251 GKSGINGVPGTPA 263
G +G+ GV G P
Sbjct: 742 GATGLPGVQGPPG 754
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 76/179 (42%), Gaps = 60/179 (33%)
Query: 112 PGLQGPIGQKGEIGAKG---EMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
PG +G G+KG GA G +MG G+ G++G PG VGP GPQG+PG G+ GP G G
Sbjct: 579 PGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGL 638
Query: 169 PGP------------------------QGIPGDEGKRGPKG---------------DMGY 189
PG +G+ G+ G +G +G D+G
Sbjct: 639 PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGL 698
Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGM---------------DGIPGKDGLPGKDGIPG 233
P G G G PGEPGL G G G+ G G GLPG G PG
Sbjct: 699 P---GPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPG 754
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 84/197 (42%), Gaps = 60/197 (30%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------ERGEKGAPGVVGPPGPQGIPGD 156
PGL GP G G G G G+ G + G +G PGV G PG +G+ G+
Sbjct: 528 PGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGE 587
Query: 157 EG------KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP----- 205
+G K G G+ G PG QG PG+ G RGP+G G G +G G GLPG+
Sbjct: 588 KGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGS 647
Query: 206 -------------------GLDGIPGRNGMDGIPGKD------------GLPGKDGIPGT 234
G+ G PG G G G++ GLPG G+
Sbjct: 648 PGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPK---GS 704
Query: 235 NGTNGEKGMTGPRGNRG 251
G GE G+ GP G+RG
Sbjct: 705 AGNPGEPGLRGPEGSRG 721
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR--DGLPGEPGLDGIP-----GRNGM 216
G G PG +G PG G RGPKGD+G G G GR +GLPG GL G P GRNG
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGR 873
Query: 217 DGIPGKDGL 225
DG G G+
Sbjct: 874 DGERGPPGV 882
>sp|Q80ZF0|CORA1_RAT Collagen alpha-1(XXVII) chain OS=Rattus norvegicus GN=Col27a1 PE=2
SV=1
Length = 1855
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 100/186 (53%), Gaps = 22/186 (11%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
PPG +GP+G +G+ +GE G G G++G G+ G PG QG PG G RG PG
Sbjct: 1338 PPGERGPVGDRGD---RGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRG------RPG 1388
Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
P+G G+EG +G G G GR G G GLPG G+ GR G +G+ G+DG PG+DG
Sbjct: 1389 PKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGP---RGVVGRQGPEGMAGQDGNPGRDG 1445
Query: 231 IP---GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPP 287
P G G +G+ G GP G RG G+ G+PG +K ES LP L PP
Sbjct: 1446 RPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPP 1498
Query: 288 TIVGSE 293
G+E
Sbjct: 1499 GKRGTE 1504
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 90/170 (52%), Gaps = 24/170 (14%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
PG G G KG GA G G +G+ G +G+PG G PG QG PG G GPKG GY
Sbjct: 696 PGPMGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGL 755
Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGK 222
PG G+PG +G+R G G PG+ G GR G PG+ PGLDG PG G+ G PG
Sbjct: 756 PGLFGLPGSDGER---GLPGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 812
Query: 223 DGL------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
GL PG G+ G G GE G+ G +G +G G++G PG
Sbjct: 813 LGLLGDMGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPG 862
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
+G KG GA GE G+ G+ G KG G +GPPG QG+ G G+ G +GD+G GP G+ GD
Sbjct: 1140 MGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGPVGPDGLKGD 1199
Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
G GP G+ G G+ GL G +GLPG PG+ G+ GR G G G+ G G G G G
Sbjct: 1200 RGDPGPDGEHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKGYQGQ 1259
Query: 238 NGE------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
GE +G GP G G+ G G PG +K
Sbjct: 1260 LGEMGIPGDPGPPGTPGPKGSRGTLGPMGAPGRMGAQGEPGLAGYNGHK 1308
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 83/158 (52%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
P G GP G KGE G KG+ G G G +G G+ G PGP+G+ G +G G G G PG
Sbjct: 1383 PRGRPGPKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGPRGVVGRQGPEGMAGQDGNPG 1442
Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
G PG +G++G GD G G G G G+ G PG G PG G G+PG+ G PGK G
Sbjct: 1443 RDGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRG 1502
Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G G G +G G +G G SG G PG + K
Sbjct: 1503 TEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPK 1540
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 94/198 (47%), Gaps = 36/198 (18%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
G P G GP G KG +G GE G+KG++GE+G PGV G PG +G +
Sbjct: 814 GLLGDMGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGV------SGDPGFQGDK 867
Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEP 205
G G G+PG +G PG GK G KG D+G PG G +G G PG
Sbjct: 868 GSHGLPGFPGARGKPGPMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGMKGKPGAR 927
Query: 206 GLDGIPGRNG---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
GL G PG+ G ++G PG+ G PG+ G+ G+ G G+ G GP G +
Sbjct: 928 GLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQ 987
Query: 251 GKSGINGVPGTPAICAYK 268
G G G+ G P I K
Sbjct: 988 GLMGFVGLVGEPGIVGEK 1005
Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 73/133 (54%), Gaps = 12/133 (9%)
Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
GAKG MG+ G +G KG PG G PG QG PG EG G K GYPG QG P
Sbjct: 682 GAKGNMGLPGLAGNPGPMGRKGHKGHPGAAGHPGEQGQPGPEGSPGAK---GYPGRQGFP 738
Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
G G GPKG GY G GL G G GE GL GIPG+ G G PG G G+ G PG +
Sbjct: 739 GPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEMGRPGFPGDFGERGPPGLD 798
Query: 236 GTNGEKGMTGPRG 248
G GE G+ GP G
Sbjct: 799 GNPGEIGLPGPPG 811
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 76/152 (50%), Gaps = 15/152 (9%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG QG G G G G G KGE G KG PG G G+RG +G G PGP
Sbjct: 1372 PGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKA---------GASGRRGTQGLQGLPGP 1422
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLPGK 228
+G+ G +G G G G PGR DGR G GE G DG P G G G PG GLPG
Sbjct: 1423 RGVVGRQGPEGMAGQDGNPGR---DGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGA 1479
Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G PG G +G G GP G RG G G+PG
Sbjct: 1480 QGPPGFKGESGLPGQLGPPGKRGTEGGTGLPG 1511
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 113 GLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
G QGP GQ G G G G +GE+G G PG VGP G+RG G G P
Sbjct: 1427 GRQGPEGMAGQDGNPGRDGRPGYQGEQGNDGDPGPVGP---------AGRRGNPGVAGLP 1477
Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLP 226
G QG PG +G+ G G +G PG+ G +G GLPG EPG G PG +G G PG GL
Sbjct: 1478 GAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLF 1537
Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G PG G G +G GP G GK GI G PG
Sbjct: 1538 GPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPG 1571
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP- 154
+V QG + PG G G +GE G G+ G G G +G PGV G PG QG P
Sbjct: 1425 VVGRQGPEGMAGQDGNPGRDGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPG 1484
Query: 155 -----------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
G GKRG +G G PG QG PG +G+ G G+MG+PG GL G G PG
Sbjct: 1485 FKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPG 1544
Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
+ G GI G G GL GK+GI G G G G+ GP+G+RG G
Sbjct: 1545 DIGFKGIQGPR------GPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRG 1589
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 87/173 (50%), Gaps = 33/173 (19%)
Query: 112 PGLQGPIGQKGEIGAKGEM------------GVKGERGE---------------KGAPGV 144
PG QG G++G GAKG + G+ GE G KG PG
Sbjct: 1089 PGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGA 1148
Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
VG PG +PGD G +G G +G PG QG+ G G+ G +GD+G +G DG G G+
Sbjct: 1149 VGEPG---LPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGP---VGPDGLKGDRGD 1202
Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
PG DG G G +G+ G++GLPG GI G G G+ G G +G RG G G
Sbjct: 1203 PGPDGEHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKG 1255
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
GQKG+ G G +G G PG+ G PGP G +G +G G G+PG QG PG E
Sbjct: 667 GQKGDPGLSPGQAHDGAKGNMGLPGLAGNPGPMG---RKGHKGHPGAAGHPGEQGQPGPE 723
Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
G G K GYPGR G G G PG G G G G+ G+PG DG G GIPG G
Sbjct: 724 GSPGAK---GYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEM 780
Query: 239 GEKGMTGPRGNRGKSGIN------GVPGTPAICAYKRESCSLLP 276
G G G G RG G++ G+PG P + + +L P
Sbjct: 781 GRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGP 824
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGK 159
PG G G++G+ G +G G KG G +G PG VG PGP+G +PG +G+
Sbjct: 708 PGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGE 767
Query: 160 RG------PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGL 207
RG +G+MG PG PGD G+RGP G G PG IGL G G+ G G
Sbjct: 768 RGLPGIPGKRGEMGRPG---FPGDFGERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGP 824
Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
G PG GM G+ G G PG G G G G G G +G++G G+ G PG
Sbjct: 825 VGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGFPGA 878
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 86/190 (45%), Gaps = 42/190 (22%)
Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKG------DM 166
GP G +G IG G G+ G GE+G PG+ G G G PGD G+RGP G ++
Sbjct: 745 GPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEI 804
Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---- 222
G PGP G+ G G G G +GYPG G+ G G GEPGL G G G+ G+ G
Sbjct: 805 GLPGPPGVLGLLGDMGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQ 864
Query: 223 --------DGLPGKDGIPGTNGTNGEKGM---------------------TGPRGNRGKS 253
G PG G PG G G+KG GP G +GK
Sbjct: 865 GDKGSHGLPGFPGARGKPGPMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGMKGKP 924
Query: 254 GINGVPGTPA 263
G G+PG P
Sbjct: 925 GARGLPGPPG 934
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 98/206 (47%), Gaps = 49/206 (23%)
Query: 111 PPGLQGPIGQKGEIGAKGEM------GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
PPG QG IGQ+GE G +G++ G+KG+RG+ G G G G +G+ G+EG GP G
Sbjct: 1169 PPGEQGLIGQRGEPGLEGDLGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEEGLPGPPG 1228
Query: 165 DMGYPGPQGIP---GDEGKRGPKGDMGYPGRI---------------------------G 194
G G +G P G++G+RG KG GY G++ G
Sbjct: 1229 ITGVRGREGKPGSQGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGTPGPKGSRGTLGPMG 1288
Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGI---------PGKDGLPGKDG-IPGTNGTNGEKGMT 244
GR G GEPGL G NG GI G+ G G+DG G G GE+G
Sbjct: 1289 APGRMGAQGEPGLAGY---NGHKGITGPLGPPGPKGEKGEQGEDGKTEGAPGPPGERGPV 1345
Query: 245 GPRGNRGKSGINGVPGTPAICAYKRE 270
G RG+RG+ G G PG + + E
Sbjct: 1346 GDRGDRGEPGDPGYPGQEGVQGLRGE 1371
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 76/139 (54%)
Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
++G G++G +G +G G GP G QG G +G+ GP+G G PG QG G+ G G KG
Sbjct: 1046 SRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKG 1105
Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
+G PG G G GLPGEPG G G G G G G PG G PG G +G KG G
Sbjct: 1106 FLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLG 1165
Query: 246 PRGNRGKSGINGVPGTPAI 264
P G G+ G+ G G P +
Sbjct: 1166 PLGPPGEQGLIGQRGEPGL 1184
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 78/189 (41%), Gaps = 51/189 (26%)
Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---------------GKRGPKGDMG 167
+IG G+ G +G +G+ GA G+ GPPG G GDE G++G G G
Sbjct: 908 DIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPG 967
Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI----------------- 210
G +G PGD G+ GP G+ G G +GL G G+ GE G G+
Sbjct: 968 LDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 1027
Query: 211 -------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
G GM G G G G DG G G+ G KG GPRG G
Sbjct: 1028 TPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1087
Query: 252 KSGINGVPG 260
+ G G G
Sbjct: 1088 QPGQQGAAG 1096
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 52/100 (52%), Gaps = 18/100 (18%)
Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
+ PPG +G G G G +GE G KG+ GE G PGV G GP+G PGD +G
Sbjct: 1494 QLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQG 1553
Query: 159 KRGPKGDMGYP---------GPQGIPGDEGKRGPKGDMGY 189
RGP G MG GP G+PG +G RG +GD G
Sbjct: 1554 PRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDWGL 1593
>sp|A0MSJ1|CRA1B_DANRE Collagen alpha-1(XXVII) chain B OS=Danio rerio GN=col27a1b PE=2 SV=1
Length = 1658
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 102/177 (57%), Gaps = 27/177 (15%)
Query: 111 PPGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
P G GP+G +G+ G G+ GV+GERG++GAPGV G GP+G PG +G +G KG
Sbjct: 1143 PSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKG 1202
Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---G 221
G P+ G+ G RG G +G PG G+ GR+G GEPGLDG G++G G+P G
Sbjct: 1203 PKGKNSPR---GESGNRGSPGPVGVPGPRGVIGREGFEGEPGLDGAAGKDGAKGMPGDLG 1259
Query: 222 KD---GLPGK---------DGIPGTNGT---NGEKGMTGPRGNRGKSGINGVPGTPA 263
+D GLPGK G+PG G+ GE+G+TG G GK G+NG G P
Sbjct: 1260 RDGDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGITGHSGPPGKRGLNGGMGFPG 1316
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 101/202 (50%), Gaps = 48/202 (23%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------IPGDEGKRG 161
PPGL IG KG G GE G+KG++GE G PG G PG QG +PG +GK G
Sbjct: 632 PPGL---IGPKGVPGNPGEPGLKGDKGELGLPGEPGEPGFQGDKGIQGSPGLPGVQGKPG 688
Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD---------------------- 199
P+G +G GP G+PG G G GD+G PG+ G++G
Sbjct: 689 PQGKIGDRGPDGLPGPLGPEGFPGDIGPPGQNGVEGPKGNAGVRGIPGPGGLPGLEGDQG 748
Query: 200 --GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK------------GMTG 245
G G PGL+G PGR G+ G PG++G+ G+ G+ G G GE+ G+ G
Sbjct: 749 PVGPAGAPGLEGRPGRKGISGNPGEEGMKGEPGMTGNPGMLGERGPVGFVGPFGEMGLAG 808
Query: 246 PRGNRGKSGINGVPGTPAICAY 267
+G+RG++G G PG +
Sbjct: 809 EKGDRGETGQPGPPGEKGAMGH 830
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 87/157 (55%), Gaps = 6/157 (3%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---EGKRGPKGDMG 167
P G GP G KG G KG+ +GE G +G+PG VG PGP+G+ G EG+ G G G
Sbjct: 1188 PRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGEPGLDGAAG 1247
Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 227
G +G+PGD G+ GD+G PG+ G G G PG PG+ G G G GI G G PG
Sbjct: 1248 KDGAKGMPGDLGR---DGDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGITGHSGPPG 1304
Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
K G+ G G G++G G +G G +G G PG I
Sbjct: 1305 KRGLNGGMGFPGKQGDQGFKGQPGDAGEQGFPGVLGI 1341
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 89/163 (54%), Gaps = 15/163 (9%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
GL GPIG G G +G +G+ G ERG G PG G G G PGD G+RGP
Sbjct: 541 GLPGPIGNMGPKGVRGFIGIPGIFGLPGADGERGLPGVPGKKGKMGRPGFPGDFGERGPP 600
Query: 164 G------DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
G ++G PGP GIPG G GP G +G PG IG G G PGEPGL G G G+
Sbjct: 601 GPDGNPGEIGAPGPVGIPGFIGDMGPVGMVGPPGLIGPKGVPGNPGEPGLKGDKGELGLP 660
Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G PG+ G G GI G+ G G +G GP+G G G +G+PG
Sbjct: 661 GEPGEPGFQGDKGIQGSPGLPGVQGKPGPQGKIGDRGPDGLPG 703
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 84/167 (50%), Gaps = 21/167 (12%)
Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD---MGYPGPQGIPGDEGKR 181
G G +G+ G+ G+ G G G PGP G PGD+G RGP G GYPG QG+PG G
Sbjct: 490 GDPGLVGLPGQPGQPGRKGQKGHPGPSGHPGDQGIRGPDGSPGAKGYPGRQGLPGPIGNM 549
Query: 182 GPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---------------KD 223
GPKG G+ PG GL G DG G PG+ G G+ G G PG +
Sbjct: 550 GPKGVRGFIGIPGIFGLPGADGERGLPGVPGKKGKMGRPGFPGDFGERGPPGPDGNPGEI 609
Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
G PG GIPG G G GM GP G G G+ G PG P + K E
Sbjct: 610 GAPGPVGIPGFIGDMGPVGMVGPPGLIGPKGVPGNPGEPGLKGDKGE 656
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 97 VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG------VKGERGEKGAPGVVGPPGP 150
V +G PPG QG GQ G+IG GE G V+G G GA G++G PGP
Sbjct: 873 VGEKGMMGMKGPEGPPGKQGLSGQMGKIGETGEAGPTGFTGVQGPTGPPGAKGILGEPGP 932
Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
QG PG G G G +G PG G G G+ G KG +G PG IG G G G+PG+DG
Sbjct: 933 QGSPGVLGPLGEIGAIGLPGKAGDQGLPGEPGEKGAVGSPGNIGEQGLIGPRGDPGVDGE 992
Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G +G DG G+ G G +G G G G KG G G+ G G+ G G P
Sbjct: 993 AGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKPG 1045
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 92/175 (52%), Gaps = 18/175 (10%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP---------GPQGIPGDEGKRGP 162
PG+ GP+G+ G IG G+ G +G GE G G VG P GP+G PG +G+ GP
Sbjct: 936 PGVLGPLGEIGAIGLPGKAGDQGLPGEPGEKGAVGSPGNIGEQGLIGPRGDPGVDGEAGP 995
Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
G G G QG G EG+ G KG +G+ G G G GL G G +G PG+ G G PG+
Sbjct: 996 SGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKPGKIGERGKPGE 1055
Query: 223 DGLPGKDGIPGTNGTNGEKGMT---GPRGNRGKSGINGVPGT------PAICAYK 268
G G G G G GE+G T GP+G+RG +G G PG P + Y+
Sbjct: 1056 KGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGAPGKMGQQGEPGLVGYE 1110
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
PG+ G G G +G GEMG+ GE+G++G G GPPG +G PG G+RG G G
Sbjct: 786 PGMLGERGPVGFVGPFGEMGLAGEKGDRGETGQPGPPGEKGAMGHPGAPGERGLSGPAGA 845
Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
PGP G G G RGPKG G G G G G+ G G +G PG+ G+ G GK G+
Sbjct: 846 PGPHGSRGLSGTRGPKGTRGARGPDGPVGEKGMMGMKGPEGPPGKQGLSGQMGKI---GE 902
Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL-LPNSETSQLL 284
G G G G +G TGP G +G G G G+P + E ++ LP Q L
Sbjct: 903 TGEAGPTGFTGVQGPTGPPGAKGILGEPGPQGSPGVLGPLGEIGAIGLPGKAGDQGL 959
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 87/184 (47%), Gaps = 18/184 (9%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
M G E P G GP G+ GE G +GE G G GEKGA G G PG +G+
Sbjct: 781 GMTGNPGMLGERGPVGFVGPFGEMGLAGEKGDRGETGQPGPPGEKGAMGHPGAPGERGLS 840
Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR- 213
G G GP G G G +G G G RGP G +G G +G+ G +G PG+ GL G G+
Sbjct: 841 GPAGAPGPHGSRGLSGTRGPKGTRGARGPDGPVGEKGMMGMKGPEGPPGKQGLSGQMGKI 900
Query: 214 --------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN------RGKSGINGVP 259
G G+ G G PG GI G G G G+ GP G GK+G G+P
Sbjct: 901 GETGEAGPTGFTGVQGPTGPPGAKGILGEPGPQGSPGVLGPLGEIGAIGLPGKAGDQGLP 960
Query: 260 GTPA 263
G P
Sbjct: 961 GEPG 964
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 81 HNNPWVWLNAYSRIPLVAMQGFCNSTKEYCPPG---------------LQGPIGQKGEIG 125
P ++ + + L +G T + PPG L GP G G G
Sbjct: 791 ERGPVGFVGPFGEMGLAGEKGDRGETGQPGPPGEKGAMGHPGAPGERGLSGPAGAPGPHG 850
Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
++G G +G +G +GA G GP G +G+ G +G GP G G G G G+ G+ GP G
Sbjct: 851 SRGLSGTRGPKGTRGARGPDGPVGEKGMMGMKGPEGPPGKQGLSGQMGKIGETGEAGPTG 910
Query: 186 DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
G G G G G+ GEPG G PG G G G GLPGK G G G GEKG G
Sbjct: 911 FTGVQGPTGPPGAKGILGEPGPQGSPGVLGPLGEIGAIGLPGKAGDQGLPGEPGEKGAVG 970
Query: 246 PRGNRGKSGINGVPGTPAI 264
GN G+ G+ G G P +
Sbjct: 971 SPGNIGEQGLIGPRGDPGV 989
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 107 KEYCP--PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG 164
KE P PG GP G G G+KG G KG+ +G G G PGP G+P GP+G
Sbjct: 1176 KEGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVP------GPRG 1229
Query: 165 DMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
+G G +G PG +G G G G PG +G DG GLPG+PG G G G+ G+ G G
Sbjct: 1230 VIGREGFEGEPGLDGAAGKDGAKGMPGDLGRDGDVGLPGKPGPQGNAGAPGLPGVQGSFG 1289
Query: 225 LPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G+ GI G +G G++G+ G G GK G G G P
Sbjct: 1290 PKGERGITGHSGPPGKRGLNGGMGFPGKQGDQGFKGQPG 1328
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 87/175 (49%), Gaps = 21/175 (12%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVK---------------GERGEKGAPGVVGPPGPQGIPGD 156
PG GP GQ G G KG GV+ G G GAPG+ G PG +GI G+
Sbjct: 711 PGDIGPPGQNGVEGPKGNAGVRGIPGPGGLPGLEGDQGPVGPAGAPGLEGRPGRKGISGN 770
Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
G+ G KG+ PG G PG G+RGP G +G G +GL G G GE G G PG G
Sbjct: 771 PGEEGMKGE---PGMTGNPGMLGERGPVGFVGPFGEMGLAGEKGDRGETGQPGPPGEKGA 827
Query: 217 ---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G PG+ GL G G PG +G+ G G GP+G RG G +G G + K
Sbjct: 828 MGHPGAPGERGLSGPAGAPGPHGSRGLSGTRGPKGTRGARGPDGPVGEKGMMGMK 882
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 89/166 (53%), Gaps = 18/166 (10%)
Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGK---RGPKGDMGYPGPQGIPG 176
EIGA G +G+ G G+ G G+VGPPG P+G+PG+ G+ +G KG++G PG G PG
Sbjct: 608 EIGAPGPVGIPGFIGDMGPVGMVGPPGLIGPKGVPGNPGEPGLKGDKGELGLPGEPGEPG 667
Query: 177 DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
+G +G +G G PG G G G G+ G DG+PG G +G PG G PG++G+ G G
Sbjct: 668 FQGDKGIQGSPGLPGVQGKPGPQGKIGDRGPDGLPGPLGPEGFPGDIGPPGQNGVEGPKG 727
Query: 237 TNGEKGMT------------GPRGNRGKSGINGVPGTPAICAYKRE 270
G +G+ GP G G G+ G PG I E
Sbjct: 728 NAGVRGIPGPGGLPGLEGDQGPVGPAGAPGLEGRPGRKGISGNPGE 773
Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 86/183 (46%), Gaps = 33/183 (18%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
PG+QG G +G+IG +G G+ G G +G PG +GPPG G+ G +G G +
Sbjct: 681 PGVQGKPGPQGKIGDRGPDGLPGPLGPEGFPGDIGPPGQNGVEGPKGNAGVRGIPGPGGL 740
Query: 164 ----GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL------------ 207
GD G GP G PG EG+ G KG G PG G+ G G+ G PG+
Sbjct: 741 PGLEGDQGPVGPAGAPGLEGRPGRKGISGNPGEEGMKGEPGMTGNPGMLGERGPVGFVGP 800
Query: 208 ---------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
G G G G PG+ G G G PG G +G G GP G+RG SG G
Sbjct: 801 FGEMGLAGEKGDRGETGQPGPPGEKGAMGHPGAPGERGLSGPAGAPGPHGSRGLSGTRGP 860
Query: 259 PGT 261
GT
Sbjct: 861 KGT 863
Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE------MGVKGERGEKGAPGVVGPPG 149
L+ +G E P G G G++G++G +GE +G KG G G PG++G G
Sbjct: 980 LIGPRGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKG 1039
Query: 150 PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
P+G PG G+RG G+ G G QG G+ G G +GD G+ G G G G G PG G
Sbjct: 1040 PEGKPGKIGERGKPGEKGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGAPGKMG 1099
Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK-------------GMTGPRGNRGKSGIN 256
G G+ G G G G G PG G GE+ G GP GNRG G
Sbjct: 1100 QQGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGEP 1159
Query: 257 GVPGTPAICAYKRE 270
G PG P + + E
Sbjct: 1160 GDPGYPGLEGVQGE 1173
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 88/186 (47%), Gaps = 45/186 (24%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV-------------------------- 144
P G GP G +G IG G G+ G GE+G PGV
Sbjct: 545 PIGNMGPKGVRGFIGIPGIFGLPGADGERGLPGVPGKKGKMGRPGFPGDFGERGPPGPDG 604
Query: 145 ----VGPPGPQGIPGDEGKRGPKGDMGYPG---PQGIPGDEGKRGPKGDMGY------PG 191
+G PGP GIPG G GP G +G PG P+G+PG+ G+ G KGD G PG
Sbjct: 605 NPGEIGAPGPVGIPGFIGDMGPVGMVGPPGLIGPKGVPGNPGEPGLKGDKGELGLPGEPG 664
Query: 192 RIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTG 245
G G G+ PG PG+ G PG G G G DGLP G +G PG G G+ G+ G
Sbjct: 665 EPGFQGDKGIQGSPGLPGVQGKPGPQGKIGDRGPDGLPGPLGPEGFPGDIGPPGQNGVEG 724
Query: 246 PRGNRG 251
P+GN G
Sbjct: 725 PKGNAG 730
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 89/182 (48%), Gaps = 17/182 (9%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
G QG +G +GE G KG +G KG G G PG++G GP+G PG G+RG G+ G G Q
Sbjct: 1003 GEQGDVGLEGESGEKGVIGFKGTEGRTGDPGLIGVKGPEGKPGKIGERGKPGEKGSKGHQ 1062
Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
G G+ G G +GD G+ G G G G G PG G G G+ G G G G G P
Sbjct: 1063 GQLGEMGALGEQGDTGFIGPKGSRGTTGFMGAPGKMGQQGEPGLVGYEGHQGPQGSLGSP 1122
Query: 233 GTNGTNGEKG----MTGP------------RGNRGKSGINGVPGTPAICAYK-RESCSLL 275
G G GE+G + GP RG+RG+ G G PG + + +E +
Sbjct: 1123 GPKGEKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGV 1182
Query: 276 PN 277
P
Sbjct: 1183 PG 1184
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG +G IG++G G G G G+ G KG PG +G G G+PG G +G G G PG
Sbjct: 1225 PGPRGVIGREGFEGEPGLDGAAGKDGAKGMPGDLGRDGDVGLPGKPGPQGNAGAPGLPGV 1284
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGIPGKDGLPGK 228
QG G +G+RG G G PG+ GL+G G P G+ G G PG G G PG G+ G
Sbjct: 1285 QGSFGPKGERGITGHSGPPGKRGLNGGMGFPGKQGDQGFKGQPGDAGEQGFPGVLGIFGP 1344
Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGING 257
G PG G G +G GP+G G G G
Sbjct: 1345 QGPPGDFGPVGIQGPKGPQGLMGMQGAIG 1373
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 84/162 (51%), Gaps = 19/162 (11%)
Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPKGD----MG 167
IG KG G G MG G+ G++G PG+VG P G G PG +G++G +GD G
Sbjct: 1080 IGPKGSRGTTGFMGAPGKMGQQGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDGKVEG 1139
Query: 168 YPGPQG---IPGDEGKRGPKGDMGYPGRIGLDG---RDGLPGEPGLDGIPGRNGMDGIPG 221
PGP G G+ G RG GD GYPG G+ G ++G PG PG G G G G G
Sbjct: 1140 PPGPSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKG 1199
Query: 222 KDGLPGKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G GK+ G G G+ G G+ GPRG G+ G G PG
Sbjct: 1200 NKGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGEPG 1241
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 81/166 (48%), Gaps = 18/166 (10%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGD------EGKRGPK 163
GL G G+KG +G+ G +G +G G +G PGV GP GP G G+ EG+ G K
Sbjct: 958 GLPGEPGEKGAVGSPGNIGEQGLIGPRGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEK 1017
Query: 164 GDMGY---------PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
G +G+ PG G+ G EGK G G+ G PG G G G GE G G G
Sbjct: 1018 GVIGFKGTEGRTGDPGLIGVKGPEGKPGKIGERGKPGEKGSKGHQGQLGEMGALGEQGDT 1077
Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G G G G G PG G GE G+ G G++G G G PG
Sbjct: 1078 GFIGPKGSRGTTGFMGAPGKMGQQGEPGLVGYEGHQGPQGSLGSPG 1123
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGY 168
PG+QG G KGE G G G G+RG G G G G QG PGD G++G G +G
Sbjct: 1282 PGVQGSFGPKGERGITGHSGPPGKRGLNGGMGFPGKQGDQGFKGQPGDAGEQGFPGVLGI 1341
Query: 169 PGPQGIPGD------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
GPQG PGD +G +GP+G MG G IG G G G PG G G G G+
Sbjct: 1342 FGPQGPPGDFGPVGIQGPKGPQGLMGMQGAIGPVGIIGPSGNPGPQGDKGNKGEMGV 1398
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 190 PGRI--GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEK 241
PGR G+ G GL G PG G PGR G G PG G PG GI PG G G +
Sbjct: 481 PGRAPSGIKGDPGLVGLPGQPGQPGRKGQKGHPGPSGHPGDQGIRGPDGSPGAKGYPGRQ 540
Query: 242 GMTGPRGNRGKSGINGVPGTPAI 264
G+ GP GN G G+ G G P I
Sbjct: 541 GLPGPIGNMGPKGVRGFIGIPGI 563
>sp|Q63870|CO7A1_MOUSE Collagen alpha-1(VII) chain OS=Mus musculus GN=Col7a1 PE=2 SV=3
Length = 2944
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 91/155 (58%), Gaps = 24/155 (15%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGDMGY 168
PG +G G+ G+ G+ G +GV+G G KG PG G PG G PG +G RG KGD+G+
Sbjct: 2550 PGDKGSKGEPGDKGSAGSIGVRGLTGPKGEPGAAGIPGEPGAPGKDGIPGFRGDKGDIGF 2609
Query: 169 PGPQGIPGD---------EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
GP+G+ G+ +G+RG KG+ G+PGR GL G+ G GEPGL
Sbjct: 2610 MGPRGLKGEKGIKGTCGRDGERGDKGEAGFPGRPGLAGKKGDMGEPGL------------ 2657
Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
PG+ G PGK+G+ G G G G +GP+G++G+ G
Sbjct: 2658 PGQSGAPGKEGLIGPKGDRGFDGQSGPKGDQGEKG 2692
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 95/193 (49%), Gaps = 25/193 (12%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------V 144
G E PG++G G G+ G +G +G G RGE+G G +
Sbjct: 2457 GLPGPRGERGEPGVRGEDGHPGQEGPRGLVGPPGSRGEQGEKGAAGAAGLKGDKGDSAVI 2516
Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGL 201
GPPGP+G GD G+RGP+G G GP+G PGD+G +G GD G G IG+ G G
Sbjct: 2517 EGPPGPRGAKGDMGERGPRGIDGDKGPRGESGNPGDKGSKGEPGDKGSAGSIGVRGLTGP 2576
Query: 202 PGEPGLDGIPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGI 255
GEPG GIPG G DGIPG G G G G G GEKG+ G G RG G
Sbjct: 2577 KGEPGAAGIPGEPGAPGKDGIPGFRGDKGDIGFMGPRGLKGEKGIKGTCGRDGERGDKGE 2636
Query: 256 NGVPGTPAICAYK 268
G PG P + K
Sbjct: 2637 AGFPGRPGLAGKK 2649
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 90/166 (54%), Gaps = 21/166 (12%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------RGPKGDM 166
G GP G KG++G +G G+ G++G +G G G G +G PGD+G RG G
Sbjct: 2518 GPPGPRGAKGDMGERGPRGIDGDKGPRGESGNPGDKGSKGEPGDKGSAGSIGVRGLTGPK 2577
Query: 167 GYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
G PG GIPG+ G RG KGD+G+ G GL G G+ G G DG G G
Sbjct: 2578 GEPGAAGIPGEPGAPGKDGIPGFRGDKGDIGFMGPRGLKGEKGIKGTCGRDGERGDKGEA 2637
Query: 218 GIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKSGING 257
G PG+ GL GK G+PG +G G++G+ GP+G+RG G +G
Sbjct: 2638 GFPGRPGLAGKKGDMGEPGLPGQSGAPGKEGLIGPKGDRGFDGQSG 2683
Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 73/131 (55%), Gaps = 11/131 (8%)
Query: 128 GEMGVKGERGEKGAPGVV--GPPGPQGIPGDEG------KRGPKGDMGYPGPQGIPGDEG 179
G G G +GE+GAPG+ G PGP+G PGD G + GP GD G PG +G PG G
Sbjct: 1560 GPRGASGSKGEQGAPGLALPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPG 1619
Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---DGIPGTNG 236
GP G G G G G +G+PGEPGL G G G+ G PG G G+ G PG +G
Sbjct: 1620 SPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPVGEKGDQGDPGEDG 1679
Query: 237 TNGEKGMTGPR 247
NG G +GP+
Sbjct: 1680 RNGSPGSSGPK 1690
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 84/196 (42%), Gaps = 50/196 (25%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------- 158
PG+ GP G +G G GE GVKGERG G P GPQG+PG G
Sbjct: 1471 PGMTGPKGDRGLTGTPGEPGVKGERGHPG------PVGPQGLPGAAGHPGVEGPEGPPGP 1524
Query: 159 --KRGPKGDMGYPGPQGI----------------PGDEGKRGPKGDMGYPGRIGLDGRDG 200
+RG KG+ G PG + PG G G KG+ G PG
Sbjct: 1525 TGRRGEKGEPGRPGDPAVGPGGAGAKGEKGEAGLPGPRGASGSKGEQGAPGLA------- 1577
Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK------SG 254
LPG+PG G PG G G+ G+ G G G PG G G G GP G RG+ G
Sbjct: 1578 LPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRGRDGEAGEKG 1637
Query: 255 INGVPGTPAICAYKRE 270
G+PG P + E
Sbjct: 1638 DEGIPGEPGLPGKAGE 1653
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG +GPIG G G G+ G GE+GE G PG GP GP+G +G+ G KGD G PG
Sbjct: 1588 PGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRG---RDGEAGEKGDEGIPGE 1644
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
G+PG G+RG +G G G +G G G PGE G +G PG +G
Sbjct: 1645 PGLPGKAGERGLRGAPGPRGPVGEKGDQGDPGEDGRNGSPGSSG 1688
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 79/176 (44%), Gaps = 38/176 (21%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
G GP G KGE G KG G GERG+KG G G PG GK+G G+ G PG
Sbjct: 2608 GFMGPRGLKGEKGIKGTCGRDGERGDKGEAGF------PGRPGLAGKKGDMGEPGLPGQS 2661
Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------------------- 204
G PG EG GPKGD G+ G+ G G G GE
Sbjct: 2662 GAPGKEGLIGPKGDRGFDGQSGPKGDQGEKGERGPPGVGGFPGPRGNDGSSGPPGPPGGV 2721
Query: 205 --PGLDGIPGRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
G +G+ G+ G G PG+ G PG G PG G G G GPRG +G++ +
Sbjct: 2722 GPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAALT 2777
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 97/234 (41%), Gaps = 47/234 (20%)
Query: 106 TKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGK 159
+E PPGL+G KGE G+ G+ G KG+RG G G VG PG + G+PG+ G
Sbjct: 2095 AREQGPPGLKG---AKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRGHDGNPGLPGERGV 2151
Query: 160 RGPKGDMGYPGPQGIPGDEGK------------------RGPKGDMGYPGRIGLDGRDGL 201
GP+G G GP+G PG G +GP G G PG G GR
Sbjct: 2152 AGPEGKPGLQGPRGTPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLP 2211
Query: 202 P--------------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
G PGL G G G G PG+DG GKDG G+ G G
Sbjct: 2212 GPVGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGVPGSP 2271
Query: 242 GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHI 295
G+ GP G +G+ G G PG + + P LL P G +
Sbjct: 2272 GLPGPVGPKGEPGPVGAPGQVVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGL 2325
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 96/250 (38%), Gaps = 104/250 (41%)
Query: 112 PGLQGPIGQKGEIGAK-----------------------------------------GEM 130
PG QGP G+ GE G K GE
Sbjct: 1430 PGPQGPAGRPGEKGEKGDCEDGGPGLPGQPGPPGEPGLRGAPGMTGPKGDRGLTGTPGEP 1489
Query: 131 GVKGERG---------------------------------EKGAPG-----VVGP----- 147
GVKGERG EKG PG VGP
Sbjct: 1490 GVKGERGHPGPVGPQGLPGAAGHPGVEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGA 1549
Query: 148 ---------PGPQGIPGDEGKRGPKGDM--GYPGPQGIPGDE------GKRGPKGDMGYP 190
PGP+G G +G++G G G PGP+G PGD G+ GP GD G P
Sbjct: 1550 KGEKGEAGLPGPRGASGSKGEQGAPGLALPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPP 1609
Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR 250
G G GR PG PG G GR+G G G +G+PG+ G+PG G G +G GPRG
Sbjct: 1610 GEKGEPGR---PGSPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPV 1666
Query: 251 GKSGINGVPG 260
G+ G G PG
Sbjct: 1667 GEKGDQGDPG 1676
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 87/222 (39%), Gaps = 77/222 (34%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG G G+KG+ GA G G G +GE+GAPG G GP G+PG G G +G G PG
Sbjct: 1844 PGEDGRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQVGPPG-QGFPGVPGI 1902
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDG---------------------------------- 197
G GD G+ G KG+ G PG GL G
Sbjct: 1903 TGPKGDRGETGSKGEQGLPGERGLRGEPGSLPNAERLLETAGIKVSALREIVDTWDESSG 1962
Query: 198 --------RDGLPGEPGLDGIPGRNGMDGIPGKDGL------------------------ 225
R G G+PG G PG+ G+ G PG+ GL
Sbjct: 1963 SFLPVPERRPGPKGDPGDRGPPGKEGLIGFPGERGLKGERGDPGPQGPPGLALGERGPPG 2022
Query: 226 ----------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
PG G+PG G +GE G G RG RG+ G G
Sbjct: 2023 PPGLAGEPGKPGIPGLPGRAGGSGEAGRPGERGERGEKGERG 2064
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 95/247 (38%), Gaps = 88/247 (35%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
PGL G G GE G GE G +GE+GE+G PG+
Sbjct: 2036 PGLPGRAGGSGEAGRPGERGERGEKGERGDQGRDGLPGLPGPPGPPGPKVAIEEPGPGLA 2095
Query: 146 ---GPPG---PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
GPPG +G PG +G GPKGD G PG +G G+ GKRG G+ G PG G+ G +
Sbjct: 2096 REQGPPGLKGAKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRGHDGNPGLPGERGVAGPE 2155
Query: 200 GLPGEPGLDGIP------------------------GRNGMDGIPGKD------------ 223
G PG G G P G +G+ G PG+
Sbjct: 2156 GKPGLQGPRGTPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPVG 2215
Query: 224 --------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
GLPG+ G G G G G +G G+RG G+ G PG P
Sbjct: 2216 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGVPGSPGLPG 2275
Query: 264 ICAYKRE 270
K E
Sbjct: 2276 PVGPKGE 2282
Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 95/270 (35%), Gaps = 122/270 (45%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------------------ 147
PG+ GP G +GE G+KGE G+ GERG +G PG + P
Sbjct: 1900 PGITGPKGDRGETGSKGEQGLPGERGLRGEPGSL-PNAERLLETAGIKVSALREIVDTWD 1958
Query: 148 -------------PGPQGIPGDEGKRGPKGDMGYPGPQGI-------------------- 174
PGP+G PGD G G +G +G+PG +G+
Sbjct: 1959 ESSGSFLPVPERRPGPKGDPGDRGPPGKEGLIGFPGERGLKGERGDPGPQGPPGLALGER 2018
Query: 175 --------------------------------PGDEGKRGPKGDMGYPGR---------- 192
PG+ G+RG KG+ G GR
Sbjct: 2019 GPPGPPGLAGEPGKPGIPGLPGRAGGSGEAGRPGERGERGEKGERGDQGRDGLPGLPGPP 2078
Query: 193 -------------------IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDG 230
G G G GEPG DG PG G G+PG G PGK G
Sbjct: 2079 GPPGPKVAIEEPGPGLAREQGPPGLKGAKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRG 2138
Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G GE+G+ GP G G G G PG
Sbjct: 2139 HDGNPGLPGERGVAGPEGKPGLQGPRGTPG 2168
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 87/212 (41%), Gaps = 69/212 (32%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------ 159
PG++G +G+ G+ G G G+ GERG G G G GP+G PG G
Sbjct: 2125 PGIKGDVGEPGKRGHDGNPGLPGERGVAGPEGKPGLQGPRGTPGPVGSHGDPGPPGAPGL 2184
Query: 160 ------RGPKGDMGYPG-----------------------------PQGIPGDEGKRGPK 184
+GP G G PG PQG PG G+ G
Sbjct: 2185 AGPAGPQGPSGLKGEPGETGPPGRGLPGPVGAVGLPGPPGPSGLVGPQGSPGLPGQVGET 2244
Query: 185 GDMGYPGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPGK-----------DG 230
G G PGR G G+DG PG PG G+PG G G PG G PG+ G
Sbjct: 2245 GKPGPPGRDGSSGKDGDRGSPGVPGSPGLPGPVGPKGEPGPVGAPGQVVVGPPGAKGEKG 2304
Query: 231 IP--------GTNGTNGEKGMTGPRGNRGKSG 254
P G G G++G+ GPRG +G++G
Sbjct: 2305 APGDLAGALLGEPGAKGDRGLPGPRGEKGEAG 2336
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 73/151 (48%), Gaps = 36/151 (23%)
Query: 161 GPKGDMGYPGPQGIPGDEGKRGP------------KGDMGYPGRIGLDGRDGLPGEPGLD 208
G G G PG G+PG G+ GP GD G P GL+G++G PG+PG D
Sbjct: 1791 GASGKAGDPGRDGLPGLRGEHGPPGPPGPPGVPGKAGDDGKP---GLNGKNGDPGDPGED 1847
Query: 209 ---------GIPGRNGMD------GIPGKDGLPGKDGIPGTNGTNGEK-----GMTGPRG 248
G PGR G D G PG GL G G+PG G G+ G+TGP+G
Sbjct: 1848 GRKGEKGDSGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQVGPPGQGFPGVPGITGPKG 1907
Query: 249 NRGKSGINGVPGTPAICAYKRESCSLLPNSE 279
+RG++G G G P + E S LPN+E
Sbjct: 1908 DRGETGSKGEQGLPGERGLRGEPGS-LPNAE 1937
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 81/197 (41%), Gaps = 60/197 (30%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PGL G +G+ G+ G G G G+ G++G+PGV PG G+PG P G G PGP
Sbjct: 2235 PGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGV---PGSPGLPG------PVGPKGEPGP 2285
Query: 172 QGIPGD--EGKRGPKGDMGYPGRI--------GLDGRDGLPGEPGLDGIPGR-------- 213
G PG G G KG+ G PG + G G GLPG G G GR
Sbjct: 2286 VGAPGQVVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGLPGPRGEKGEAGRAGGPGDPG 2345
Query: 214 -NGMDGIPGKDGLPGKDGI--------------------------------PGTNGTNGE 240
+G G PG GL G+ GI PG G GE
Sbjct: 2346 EDGQKGAPGLKGLKGEPGIGVQGPPGPSGPPGMKGDLGPPGAPGAPGVVGFPGQTGPRGE 2405
Query: 241 KGMTGPRGNRGKSGING 257
G GP G RG +G G
Sbjct: 2406 TGQPGPVGERGLAGPPG 2422
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 84/199 (42%), Gaps = 60/199 (30%)
Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---------------------IPGDEGK- 159
G+ G +GE G G GE+G + GPPG +G + GD+G
Sbjct: 2398 GQTGPRGETGQPGPVGERG---LAGPPGREGAPGPLGPPGPPGSAGAPGASGLKGDKGDP 2454
Query: 160 ----RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGR----------------- 198
GP+G+ G PG +G G G+ GP+G +G PG G G
Sbjct: 2455 GAGLPGPRGERGEPGVRGEDGHPGQEGPRGLVGPPGSRGEQGEKGAAGAAGLKGDKGDSA 2514
Query: 199 --DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE------------KGMT 244
+G PG G G G G GI G G G+ G PG G+ GE +G+T
Sbjct: 2515 VIEGPPGPRGAKGDMGERGPRGIDGDKGPRGESGNPGDKGSKGEPGDKGSAGSIGVRGLT 2574
Query: 245 GPRGNRGKSGINGVPGTPA 263
GP+G G +GI G PG P
Sbjct: 2575 GPKGEPGAAGIPGEPGAPG 2593
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 97/270 (35%), Gaps = 106/270 (39%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
G S P G G G+KG+ G GE G+ G+ GE+G G GP GP G GD+G
Sbjct: 1616 GRPGSPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPVGEKGDQGDP 1675
Query: 161 GPKGDMGYPGP----------------------------QGIPGDE-------------- 178
G G G PG +G PG E
Sbjct: 1676 GEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDAGIESRDKGEPGQEGPRGPKGDPGPPGV 1735
Query: 179 -GKRG------------------PKGDMGYPGRIGLDGRDGL------------------ 201
G+RG P GD G G GLDGR GL
Sbjct: 1736 SGERGIDGLRGPPGPQGDPGVRGPAGDKGDRGPPGLDGRSGLDGKPGAPGPPGLHGASGK 1795
Query: 202 PGEPGLDGIPG------------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
G+PG DG+PG + G DG PG +G G G PG +G GEKG
Sbjct: 1796 AGDPGRDGLPGLRGEHGPPGPPGPPGVPGKAGDDGKPGLNGKNGDPGDPGEDGRKGEKGD 1855
Query: 244 T---------GPRGNRGKSGINGVPGTPAI 264
+ GP+G RG G G+ G P +
Sbjct: 1856 SGAPGREGPDGPKGERGAPGNPGLQGPPGL 1885
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 15/110 (13%)
Query: 97 VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
+ + G T + PPG +G G+ G G G G GE GEKG G+ PG G+PG
Sbjct: 1594 IGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRGRDGEAGEKGDEGI---PGEPGLPGK 1650
Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
G+RG + G PGP+G G+ KGD G PG DGR+G PG G
Sbjct: 1651 AGERGLR---GAPGPRGPVGE------KGDQGDPGE---DGRNGSPGSSG 1688
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 64/143 (44%), Gaps = 43/143 (30%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PGL G + G+ G GE G KGE+G+ GAPG + GP
Sbjct: 1832 PGLNG---KNGDPGDPGEDGRKGEKGDSGAPG---------------REGPD-------- 1865
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
GPKG+ G PG GL G GLPG+ G G G PG G+ G G
Sbjct: 1866 ----------GPKGERGAPGNPGLQGPPGLPGQVGPPG-------QGFPGVPGITGPKGD 1908
Query: 232 PGTNGTNGEKGMTGPRGNRGKSG 254
G G+ GE+G+ G RG RG+ G
Sbjct: 1909 RGETGSKGEQGLPGERGLRGEPG 1931
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 70/154 (45%), Gaps = 29/154 (18%)
Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---- 186
G KG+RGE+G PPGP ++G G G G PGPQG G G++G KGD
Sbjct: 1398 GDKGDRGERG------PPGPGIGASEQGDPGLPGLPGSPGPQGPAGRPGEKGEKGDCEDG 1451
Query: 187 ----------------MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
G PG G G GL G PG G+ G G G G GLPG G
Sbjct: 1452 GPGLPGQPGPPGEPGLRGAPGMTGPKGDRGLTGTPGEPGVKGERGHPGPVGPQGLPGAAG 1511
Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
PG G G G TG RG+ G G PG PA+
Sbjct: 1512 HPGVEGPEGPPGPTG---RRGEKGEPGRPGDPAV 1542
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 67/161 (41%), Gaps = 37/161 (22%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
++G C E G G G+ G G KG+MG G G+ GAPG G GP+G G +
Sbjct: 2620 GIKGTCGRDGERGDKGEAGFPGRPGLAGKKGDMGEPGLPGQSGAPGKEGLIGPKGDRGFD 2679
Query: 158 GKRGPKGDMGYPGPQ---------------------------------GIPGDEGKRGPK 184
G+ GPKGD G G + G+ G +G+RGP
Sbjct: 2680 GQSGPKGDQGEKGERGPPGVGGFPGPRGNDGSSGPPGPPGGVGPKGPEGLQGQKGERGPP 2739
Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
G+ +G G G PGE G G PG G G G+ L
Sbjct: 2740 GES----VVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAAL 2776
>sp|Q0VF58|COJA1_MOUSE Collagen alpha-1(XIX) chain OS=Mus musculus GN=Col19a1 PE=2 SV=2
Length = 1136
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 95/193 (49%), Gaps = 41/193 (21%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---------------------PGP 150
PG G +G KG G GE KGE+G++G PG++GP G
Sbjct: 461 PGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEPGDPGPPGLLGSPGLKGQ 520
Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD----MGYPGRIGLDGRDG-----L 201
QG G G RGP GD+G PG GIPG +G +G KGD +G PG GL G G L
Sbjct: 521 QGPAGSMGPRGPPGDVGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDAGPPGISL 580
Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKD-----------GIPGTNGTNGEKGMTGPRGNR 250
PG+PGLDG PG G G G+ GLPG GIPG G+ G G G +G R
Sbjct: 581 PGKPGLDGNPGSPGPRGPKGERGLPGLHGSPGDTGPPGVGIPGRTGSQGPAGEPGIQGPR 640
Query: 251 GKSGINGVPGTPA 263
G G+ G PG P
Sbjct: 641 GLPGLPGTPGMPG 653
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 87/178 (48%), Gaps = 45/178 (25%)
Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG---PQGI---- 174
GE GA G G KG+ G G PG VGP G +G PG+ +G KGD G PG PQGI
Sbjct: 444 GEHGASGPKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEP 503
Query: 175 -----------PGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
PG +G++GP G MG PG +GL PG GIPG+ G+ G
Sbjct: 504 GDPGPPGLLGSPGLKGQQGPAGSMGPRGPPGDVGL---------PGEHGIPGKQGVKGEK 554
Query: 221 GK-------DGLPGKDG--------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G GLPG G +PG G +G G GPRG +G+ G+ G+ G+P
Sbjct: 555 GDPGGRLGPPGLPGLKGDAGPPGISLPGKPGLDGNPGSPGPRGPKGERGLPGLHGSPG 612
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 68/147 (46%), Gaps = 32/147 (21%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGA-------PGVVGPP 148
L QG S PPG +G GE G G+ GVKGE+G+ G PG+ G
Sbjct: 517 LKGQQGPAGSMGPRGPPGD---VGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDA 573
Query: 149 GPQGI-----------PGDEGKRGPKGDMGYPGPQGIPGDEG-----------KRGPKGD 186
GP GI PG G RGPKG+ G PG G PGD G +GP G+
Sbjct: 574 GPPGISLPGKPGLDGNPGSPGPRGPKGERGLPGLHGSPGDTGPPGVGIPGRTGSQGPAGE 633
Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGR 213
G G GL G G PG PG DG PG+
Sbjct: 634 PGIQGPRGLPGLPGTPGMPGNDGAPGK 660
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVG------PPGPQGIPGDEGKRGPKGDMGYPGPQ 172
G G G +G GVKG+RG G PG+ G PGP G+PG++G+RGP GD G+PGP+
Sbjct: 854 GAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPGPPGVPGEQGERGPIGDTGFPGPE 913
Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
GP G G G+ GL G G+ G+PG G G G GIPG G G+ G P
Sbjct: 914 ---------GPSGKPGINGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGERGKP 964
Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
G G G G GP G++G +
Sbjct: 965 GLTGMKGAIGPVGPAGSKGST 985
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 64/138 (46%), Gaps = 42/138 (30%)
Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPG---------------DEGKRGPKGDMGYPGR 192
PG G+PG EG G KGD G GP GI G ++G+RGP GD G+PG
Sbjct: 853 PGAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPGPPGVPGEQGERGPIGDTGFPGP 912
Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEKGMT----- 244
G G+ G I GKDGLPG GI PG G GE+G
Sbjct: 913 EGPSGKPG------------------INGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGD 954
Query: 245 -GPRGNRGKSGINGVPGT 261
GP+G RGK G+ G+ G
Sbjct: 955 RGPQGERGKPGLTGMKGA 972
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 93/248 (37%), Gaps = 96/248 (38%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGE------------------KGAPGVVGPP------ 148
G++G IG+KGE GAKG+ G+ G G+ KG G GPP
Sbjct: 331 GIKGEIGEKGEPGAKGDSGLDGLNGQDGLKGDSGPQGPPGPKGDKGDMGPPGPPALTGSI 390
Query: 149 ---GPQGIPGDEGKRGPKG-----------------------------------DMGYPG 170
GPQG PG EG+RG +G + G G
Sbjct: 391 GIQGPQGPPGKEGQRGRRGKTGPPGNPGPPGPPGPPGLQGLQQPFGGYFNKGTGEHGASG 450
Query: 171 PQG------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL----------------- 207
P+G +PG G GPKG G PG G G GEPGL
Sbjct: 451 PKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEPGDPGPPG 510
Query: 208 ----------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR-GNRGKSGIN 256
G G G G PG GLPG+ GIPG G GEKG G R G G G+
Sbjct: 511 LLGSPGLKGQQGPAGSMGPRGPPGDVGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLK 570
Query: 257 GVPGTPAI 264
G G P I
Sbjct: 571 GDAGPPGI 578
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 90/241 (37%), Gaps = 83/241 (34%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG----------- 161
GL G G G+ G +G G+KGE GEKG PG G G G+ G +G +G
Sbjct: 313 GLDGTPGLPGQKGEQGLEGIKGEIGEKGEPGAKGDSGLDGLNGQDGLKGDSGPQGPPGPK 372
Query: 162 -PKGDMGYP------------GPQGIPGDEGKR--------------------------- 181
KGDMG P GPQG PG EG+R
Sbjct: 373 GDKGDMGPPGPPALTGSIGIQGPQGPPGKEGQRGRRGKTGPPGNPGPPGPPGPPGLQGLQ 432
Query: 182 -----------------GPKGDM------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
GPKG+ G+PG +G G G PGEP G G G G
Sbjct: 433 QPFGGYFNKGTGEHGASGPKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPG 492
Query: 219 IPGKDGLPGKDGI---------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
+ G G+ G+ G PG G G G GPRG G G+ G G P K
Sbjct: 493 LLGPQGIKGEPGDPGPPGLLGSPGLKGQQGPAGSMGPRGPPGDVGLPGEHGIPGKQGVKG 552
Query: 270 E 270
E
Sbjct: 553 E 553
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 39/77 (50%), Gaps = 21/77 (27%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG QG +G+ G+ G KGERG+ QGIPGD RGP+G+ G PG
Sbjct: 928 PGAQGIMGK------PGDRGPKGERGD------------QGIPGD---RGPQGERGKPGL 966
Query: 172 QGIPGDEGKRGPKGDMG 188
G+ G G GP G G
Sbjct: 967 TGMKGAIGPVGPAGSKG 983
>sp|Q02388|CO7A1_HUMAN Collagen alpha-1(VII) chain OS=Homo sapiens GN=COL7A1 PE=1 SV=2
Length = 2944
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 101/192 (52%), Gaps = 28/192 (14%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV-GPPGPQGIPGD 156
++G + P GL GP G +GE G KG++G G +G+KG V+ GPPGP+G GD
Sbjct: 2478 GIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGD 2537
Query: 157 EGKRGPKGDMGYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
G+RGP+G G GP+ G PGD+G +G GD G G GL G G G+P
Sbjct: 2538 MGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQP-------- 2589
Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV--------------- 258
G GIPG G PGKDG+PG G G+ G GPRG +G+ G+ G
Sbjct: 2590 -GAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGP 2648
Query: 259 PGTPAICAYKRE 270
PG P + +K E
Sbjct: 2649 PGRPGLAGHKGE 2660
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 94/209 (44%), Gaps = 61/209 (29%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--------------------PGP-- 150
GL+G G +G +G KG+ G GE G G+PG GP PG
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGARE 1717
Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------KRGPKGDMGYPGRIGL 195
+G PGD G+ GP+G G PG G PG+ G RGP G+ G G GL
Sbjct: 1718 KGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777
Query: 196 DGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPG---------------------KDGI 231
DGR GL G+PG G G NG G PG+DGLPG +DG
Sbjct: 1778 DGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGK 1837
Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
PG NG NGE G G G +G+ G +G G
Sbjct: 1838 PGLNGKNGEPGDPGEDGRKGEKGDSGASG 1866
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 106/259 (40%), Gaps = 37/259 (14%)
Query: 25 PIISKHNVSNRFRRHVDKDKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNP 84
P +K ++ R R +D DKG DN P + P D +
Sbjct: 2531 PRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPG 2590
Query: 85 WVWLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV 144
+ P G E G GP G KGE G KG G+ GE+G+KG G
Sbjct: 2591 AAGIPGDPGSP--GKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAG- 2647
Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
P G PG G +G G+ G PG G PG EG GPKGD G+ G+ G G G GE
Sbjct: 2648 -----PPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGE 2702
Query: 205 ---PGLDGIPGRNGMD---------------------GIPGKDGLPGKD-----GIPGTN 235
PG+ G PG +G D G G+ G PG+ G+PG
Sbjct: 2703 RGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAP 2762
Query: 236 GTNGEKGMTGPRGNRGKSG 254
G GE+G GP G RG+ G
Sbjct: 2763 GERGEQGRPGPAGPRGEKG 2781
Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 79/173 (45%), Gaps = 34/173 (19%)
Query: 104 NSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
K C GL G G KGE G G G+ G +GE G PGV PG G PG EG GPK
Sbjct: 2628 RGVKGAC--GLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGV---PGQSGAPGKEGLIGPK 2682
Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--------------- 208
GD G+ +G+ GPKGD G G G G G PG G D
Sbjct: 2683 GDRGF---------DGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPR 2733
Query: 209 ---GIPGRNGMDGIPGKD--GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
G+ G+ G G PG+ G PG G PG G G G GPRG +G++ +
Sbjct: 2734 GPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAALT 2786
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 88/190 (46%), Gaps = 46/190 (24%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAP---------GVVGP---PGPQGIPGDE-- 157
PGL G +G+ G+ GA G G G+ G++G+P G VGP PGP G PG
Sbjct: 2244 PGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVV 2303
Query: 158 GKRGPKGDMGYPGPQGIPGD-EGKRGPKGDMGYP---GRIGLDGRDGLPGEPGLD---GI 210
G G KG+ G PG G+ GD G+ G KGD G P G G GR G PG+PG D G
Sbjct: 2304 GLPGAKGEKGAPG--GLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGA 2361
Query: 211 PGRNGMD-----------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
PG G G+PG G PG G PG G GE G GP
Sbjct: 2362 PGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPS 2421
Query: 248 GNRGKSGING 257
G RG +G G
Sbjct: 2422 GERGLAGPPG 2431
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 78/141 (55%), Gaps = 12/141 (8%)
Query: 133 KGERG--EKGAPGVVGPPGPQGIPGDEGKRGP------KGDMGYPGPQGIPGDEGKRGPK 184
KGE+G E GAPG+ PG G PG++G RGP KGD G+PGP G G++G+RGP
Sbjct: 1444 KGEKGDSEDGAPGL---PGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP 1500
Query: 185 GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
G G G G+ GR G G G G GR G G PG+ G P G P G GEKG
Sbjct: 1501 GPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVG-PAVAGPKGEKGDV 1559
Query: 245 GPRGNRGKSGINGVPGTPAIC 265
GP G RG +G+ G G P +
Sbjct: 1560 GPAGPRGATGVQGERGPPGLV 1580
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 89/199 (44%), Gaps = 60/199 (30%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG----------------------------- 143
GL GP G+KGE G GE G GE G+KGAPG
Sbjct: 2333 GLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLG 2392
Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGP---QGIPGDEGKR------------------- 181
+ G PG G+ G G+ GP+G+MG PGP +G+ G G+
Sbjct: 2393 LPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPG 2452
Query: 182 --GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
G KGD G PG +GL G G GEPG+ G DG PG++G G G PG+ G G
Sbjct: 2453 ASGLKGDKGDPG-VGLPGPRGERGEPGI------RGEDGRPGQEGPRGLTGPPGSRGERG 2505
Query: 240 EKGMTGPRGNRGKSGINGV 258
EKG G G +G G + V
Sbjct: 2506 EKGDVGSAGLKGDKGDSAV 2524
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 93/255 (36%), Gaps = 106/255 (41%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--------------------------APGVV 145
PG G +G+ G G +GE G KGERGE+G PG+
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104
Query: 146 GPPGPQGI------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
G GP G+ PG G +GPKGD G PG +G G+ G RG G+ G PG G+ G +
Sbjct: 2105 GEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2164
Query: 200 ---------------------------------------GLPGEPGLDGIPGRN------ 214
GL GEPG G PGR
Sbjct: 2165 GKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTG 2224
Query: 215 -----------------------------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG 245
G G PG+DG GKDG G+ G G G+ G
Sbjct: 2225 AVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPG 2284
Query: 246 PRGNRGKSGINGVPG 260
P G +G+ G G PG
Sbjct: 2285 PVGPKGEPGPTGAPG 2299
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 83/182 (45%), Gaps = 45/182 (24%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG-------APGVVGPPGPQGIPGDEGKRG-PK- 163
G QGP G++G IG GE G+KG+RG+ G A G GPPGP G+ G+ GK G P
Sbjct: 1985 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGL 2044
Query: 164 -GDMGYPGPQGIPGDEGKRGPKGDMGYPGR--------------------------IGLD 196
G G G G PG+ G+RG KG+ G GR GL
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLS 2104
Query: 197 GRDGLPGEPGLDGIPGRN---------GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
G G PG G G PG N G+ GI G G PG G G G GE+GM GP
Sbjct: 2105 GEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2164
Query: 248 GN 249
G
Sbjct: 2165 GK 2166
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 101/240 (42%), Gaps = 70/240 (29%)
Query: 95 PLVAMQGFCNSTKEY-CPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
P A+ G + E P GL G + GE GAKG+ G+ G RGEKG G G PG G
Sbjct: 2298 PGQAVVGLPGAKGEKGAPGGLAGDL--VGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGE 2355
Query: 154 PGDEGKRGPKG-----------------------DMGYPGPQGIPGD---EGKRGPKGDM 187
G +G GPKG D+G PG G PG G+ GP+G+M
Sbjct: 2356 DGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEM 2415
Query: 188 GYPGRIGLDGRDGLPGEPGLD--------------------------------GIPGRNG 215
G PG G GL G PG + G+PG G
Sbjct: 2416 GQPG---PSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRG 2472
Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
G P G+ G+DG PG G +G+TGP G+RG+ G G G+ + K +S +L
Sbjct: 2473 ERGEP---GIRGEDGRPGQEGP---RGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVIL 2526
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 84/186 (45%), Gaps = 39/186 (20%)
Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
+G G+ G+ GE G PG PG G G +G R G G PG G+PG G +G G
Sbjct: 2241 QGSPGLPGQVGETGKPGA---PGRDGASGKDGDR---GSPGVPGSPGLPGPVGPKGEPGP 2294
Query: 187 MGYPGR--IGLDGRDGLPGEPG-----LDGIPGRNGMDGIP---GKDGLPGKDGIPGTNG 236
G PG+ +GL G G G PG L G PG G G+P G+ G G+ G PG G
Sbjct: 2295 TGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2354
Query: 237 TNGEKGMTGPRGNRGKS--------------------GINGVPGTPAICAYKRESCSLLP 276
+G+KG GP+G +G G+ G+PG P + + ++ P
Sbjct: 2355 EDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTG---P 2411
Query: 277 NSETSQ 282
E Q
Sbjct: 2412 RGEMGQ 2417
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 94/238 (39%), Gaps = 87/238 (36%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP------------ 148
G E PG G G+KG+ GA G G G +GE+GAPG++GP
Sbjct: 1839 GLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPP 1898
Query: 149 -----------GPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG------------------ 179
GP+G D G+ G KG+ G PG +G+ G+ G
Sbjct: 1899 GQGFPGVPGGTGPKG---DRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASA 1955
Query: 180 ---------------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLD---------- 208
+RGPKGD G G G +G G PGE GL
Sbjct: 1956 LREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQG 2015
Query: 209 ---------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
G PG +G+ G PGK G+P G+PG G GE G G RG RG+ G G
Sbjct: 2016 PPGLALGERGPPGPSGLAGEPGKPGIP---GLPGRAGGVGEAGRPGERGERGEKGERG 2070
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 101 GFCNSTKEYCPPG--LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG 158
G E PPG L GP G G G G G+ G +G G PG VG G G PG +G
Sbjct: 2204 GLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDG 2263
Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD--GLPGEPGLDGIPGRNGM 216
G GD G PG +PG G GP G G PG G G+ GLPG G G PG
Sbjct: 2264 ASGKDGDRGSPG---VPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAG 2320
Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
D + G PG G G G GEKG G G G G +G G P +K
Sbjct: 2321 DLV----GEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFK 2368
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 75/162 (46%), Gaps = 38/162 (23%)
Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM---------GYPGPQGIPGDEGKRGP 183
+G G KG PG GPPG G GP G + G GPQG PG G+ G
Sbjct: 2200 QGPSGLKGEPGETGPPG-------RGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGE 2252
Query: 184 KGDMGYPGRIGLDGRD---GLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTN--- 235
G G PGR G G+D G PG PG G+PG G G PG G PG+ G+PG
Sbjct: 2253 TGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEK 2312
Query: 236 --------------GTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G G++G+ GPRG +G++G G PG P
Sbjct: 2313 GAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPG 2354
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 74/157 (47%), Gaps = 29/157 (18%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGP------- 147
++G C E G GP G+ G G KGEMG G G+ GAPG ++GP
Sbjct: 2629 GVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFD 2688
Query: 148 --PGPQGIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRGPKGDMGYP 190
PGP+G G++G+RG G G+PGP G G EG +G KG+ G P
Sbjct: 2689 GQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPP 2748
Query: 191 GR--IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
G +G G G PGE G G PG G G G+ L
Sbjct: 2749 GERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAAL 2785
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 93/246 (37%), Gaps = 99/246 (40%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGD------------- 156
P + GP G+KG++G G G G +GE+G PG+V G PGP+G PGD
Sbjct: 1547 PAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPP 1606
Query: 157 --------------------------EGKRGPKGD------------MGYPGPQGIPGDE 178
+G+ G KGD G G +G PG
Sbjct: 1607 GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVR 1666
Query: 179 GKRGPKGDMGYPGRIGLDGRDGLP-------------------------------GEPGL 207
G G KGD G PG DGR+G P GEPG
Sbjct: 1667 GPVGEKGDQGDPGE---DGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGD 1723
Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPG------------TNGTNGEKGMTGPRGNRGKSGI 255
G G G G PG G PG+ GI G G GEKG GP G G+SG+
Sbjct: 1724 RGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGL 1783
Query: 256 NGVPGT 261
+G PG
Sbjct: 1784 DGKPGA 1789
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 62/120 (51%), Gaps = 29/120 (24%)
Query: 109 YCPPGLQGPIGQKGEIGAKGEMG------------------------VKGERGEKGAPGV 144
YCP G +G + GE+G +G++G KGERG GA G
Sbjct: 1250 YCPKGQKG---EPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGR 1306
Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR-IGLDGRDGLPG 203
G PG G PG G G KG G PGP+G PG+ G RGPKG+ G PG+ IG +G GLPG
Sbjct: 1307 PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEG-PGLPG 1365
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 87/239 (36%), Gaps = 95/239 (39%)
Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGV------------------------------- 144
GP G +GE G+KGE G+ GERG +G PG
Sbjct: 1910 GPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGS 1969
Query: 145 -----------------VGPP---GPQGIPGDEGKRGPK-------------GDMGYPGP 171
GPP GP G PG+ G +G + G+ G PGP
Sbjct: 1970 FLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGP 2029
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------ 219
G+ G+ GK G G PGR G G G PGE G G G G G
Sbjct: 2030 SGLAGEPGK---PGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGP 2086
Query: 220 ------------PGKDGLPGKDGIPGTNGTNGEKGM---TGPRGNRGKSGINGVPGTPA 263
PG GL G+ G PG G GE G GP+G+RG GI G G P
Sbjct: 2087 PGPPGPKVSVDEPGP-GLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPG 2144
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 70/151 (46%), Gaps = 30/151 (19%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
+ G S E P G G IG KG+ G G +G GE+GE+G P GP G +G+PG
Sbjct: 1456 GLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP---GPAGSRGLPGVA 1512
Query: 158 G---------------KRGPKGDMGYP-----------GPQGIPGDEGKRGPKGDMGYPG 191
G ++G KG+ G P GP+G GD G GP+G G G
Sbjct: 1513 GRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQG 1572
Query: 192 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
G G LPG+PG G PG G G+ G+
Sbjct: 1573 ERGPPGLV-LPGDPGPKGDPGDRGPIGLTGR 1602
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 91/209 (43%), Gaps = 47/209 (22%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
++GF PG++GP G+KG+ +G G+ G G G PG GP GP G
Sbjct: 1746 GIEGFRGPPGPQGDPGVRGPAGEKGD---RGPPGLDGRSGLDGKPGAAGPSGPNGA---- 1798
Query: 158 GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP---------GRIGLDGRDGLPGEPGLD 208
G G PG G+PG G++G G G P G+ GL+G++G PG+PG D
Sbjct: 1799 -----AGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGED 1853
Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG-----------------------EKGMTG 245
GR G G G G G+DG G G G G TG
Sbjct: 1854 ---GRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTG 1910
Query: 246 PRGNRGKSGINGVPGTPAICAYKRESCSL 274
P+G+RG++G G G P + E S+
Sbjct: 1911 PKGDRGETGSKGEQGLPGERGLRGEPGSV 1939
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 76/183 (41%), Gaps = 63/183 (34%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP--------QGI--------- 153
P G +G G KGE G GE G++GE PG V P GI
Sbjct: 1911 PKGDRGETGSKGEQGLPGERGLRGE------PGSV----PNVDRLLETAGIKASALREIV 1960
Query: 154 -----------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD------ 196
P E +RGPKGD G QG PG EG +G+PG GL
Sbjct: 1961 ETWDESSGSFLPVPERRRGPKGDSGE---QGPPGKEGP------IGFPGERGLKGDRGDP 2011
Query: 197 ----------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
G G PG GL G PG+ G+ G+PG+ G G+ G PG G GEKG G
Sbjct: 2012 GPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGE 2071
Query: 247 RGN 249
+G
Sbjct: 2072 QGR 2074
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 73/168 (43%), Gaps = 45/168 (26%)
Query: 112 PGLQGPIGQKGEIGAK------GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
PGL G G++G G + G+ GV+G GEK G RGP G
Sbjct: 1736 PGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEK------------------GDRGPPGL 1777
Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG------------------L 207
G G G PG G GP G G+ G GRDGLPG G
Sbjct: 1778 DGRSGLDGKPGAAGPSGPNGAA---GKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGE 1834
Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
DG PG NG +G PG G G+ G G +G +G +G GP+G RG GI
Sbjct: 1835 DGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGI 1882
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 72/189 (38%), Gaps = 66/189 (34%)
Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK----------GERGEKGAPGVVGPPG 149
+G + E PPG +GPIG GE G KG+ G GERG G G+ G PG
Sbjct: 1978 RGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPG 2037
Query: 150 PQGIPGDEGKRGPKGDMGYPG--------------------------------------- 170
GIPG G+ G G+ G PG
Sbjct: 2038 KPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVD 2097
Query: 171 -----------PQGIPGDEGK------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
P G+ G +G+ +GPKGD G PG G G G G+ G G+PG
Sbjct: 2098 EPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGE 2157
Query: 214 NGMDGIPGK 222
GM G GK
Sbjct: 2158 RGMAGPEGK 2166
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
KG+ G+PG DG PG PGR G G PG GL G G+PG G GE+G
Sbjct: 1295 KGERGFPGA------DGRPGS------PGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGP 1342
Query: 244 TGPRGNRGKSG 254
GP+G G G
Sbjct: 1343 RGPKGEPGAPG 1353
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 42/102 (41%), Gaps = 27/102 (26%)
Query: 183 PKGDMGYPGRIGLDGR---------------------------DGLPGEPGLDGIPGRNG 215
PKG G PG +GL G+ G G PG DG PG G
Sbjct: 1252 PKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPG 1311
Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
G PG G PG G PG G G+ G GPRG +G+ G G
Sbjct: 1312 RAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPG 1353
Score = 38.1 bits (87), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNGMDGI 219
KG+ G+PG G PG G+ G+ G PG GL G GLP G+PG G G G G
Sbjct: 1295 KGERGFPGADGRPGSPGR---AGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGA 1351
Query: 220 PGK------DGLPGK 228
PG+ GLPG+
Sbjct: 1352 PGQVIGGEGPGLPGR 1366
>sp|Q05306|COAA1_MOUSE Collagen alpha-1(X) chain OS=Mus musculus GN=Col10a1 PE=2 SV=1
Length = 680
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 14/156 (8%)
Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP-----QGIPGDEGKRGPKGDMGYPGPQ 172
IG+ G IG+ G+ G+ GE+G GAPG+ GPPG QG+PG G+RGP
Sbjct: 263 IGKPGAIGSPGQPGIPGEKGHPGAPGIAGPPGAPGFGKQGLPGLRGQRGP---------A 313
Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
G+PG G +G +G G+PG GL G G G G GIPG +G+ G G+ GL G G P
Sbjct: 314 GLPGAPGAKGERGPAGHPGEPGLPGSPGNMGPQGPKGIPGNHGIPGAKGEIGLVGPAGPP 373
Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G G G G+ G G G+ G+NG G P + K
Sbjct: 374 GARGARGPPGLDGKTGYPGEPGLNGPKGNPGLPGQK 409
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG---APGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
G +GP G G GAKGE G G GE G +PG +GP GP+GIPG+ G G KG++G
Sbjct: 308 GQRGPAGLPGAPGAKGERGPAGHPGEPGLPGSPGNMGPQGPKGIPGNHGIPGAKGEIGLV 367
Query: 170 GPQGIPGDEGKRGPKG---DMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
GP G PG G RGP G GYPG GL+G G PG PG G PG G G+ G G
Sbjct: 368 GPAGPPGARGARGPPGLDGKTGYPGEPGLNGPKGNPGLPGQKGDPGVGGTPGLRGPVGPV 427
Query: 227 GKDGIPGTNGTNGEKGMTGPRGNR 250
G G+PG NG G +G G G R
Sbjct: 428 GAKGVPGHNGEAGPRGEPGIPGTR 451
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDE 157
G S P G +G G G GAKGE+G+ G G GA G GPPG G PG+
Sbjct: 335 GLPGSPGNMGPQGPKGIPGNHGIPGAKGEIGLVGPAGPPGARGARGPPGLDGKTGYPGEP 394
Query: 158 GKRGPKGDMGYPGPQGIP---GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
G GPKG+ G PG +G P G G RGP G +G G G +G G GEPG+ G
Sbjct: 395 GLNGPKGNPGLPGQKGDPGVGGTPGLRGPVGPVGAKGVPGHNGEAGPRGEPGIPG 449
>sp|Q30D77|COOA1_MOUSE Collagen alpha-1(XXIV) chain OS=Mus musculus GN=Col24a1 PE=2 SV=2
Length = 1733
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ---GIPGDEGKRGPKGDMGYP 169
G++GP G +G+ G +GE G KG+ G G+ G G PGP+ G PG+EG +G G G P
Sbjct: 1027 GVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAP 1086
Query: 170 GPQGIPGDEGKRGP------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
G G+PG++G +G G +G PG++GL G +G+ G PG G G+ G G G
Sbjct: 1087 GGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPT 1146
Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G G G PG+ G NG KG G RG G G+ G G P I Y+
Sbjct: 1147 GEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMGPEGEPGIPGYR 1191
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG QG G G++G GE G +G G G PG +G GP G GD G +G G G GP
Sbjct: 993 PGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGP 1052
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD------------GI 219
G G G+ GP+G+ G PG GL G+DGL G PG G+PG +G G
Sbjct: 1053 AGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGR 1112
Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
PG+ GLPG +GI GT G G G G +G G +G G G P
Sbjct: 1113 PGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPG 1156
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKG------ERGEKGAPGVVGPPGPQ 151
QG S+ + P G GP G G G GEMGV+G + G +G PG G GP
Sbjct: 994 GFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGPA 1053
Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP------GEP 205
G G G+ GP+G+ G PG +G+ G +G +G G G PG G G GLP G P
Sbjct: 1054 GSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGRP 1113
Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
G G+PG G+ G PG+ G GK G G G GE G GP G+ G++G G GT
Sbjct: 1114 GQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENGPKGARGT 1169
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 98/190 (51%), Gaps = 20/190 (10%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGIPGDEGKRGPKGD---M 166
G QG G KGE G +G+ G+ G G+ G+PG V G PG QG+PG G GP G+
Sbjct: 955 GDQGGHGAKGEKGNQGKRGLPGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPR 1014
Query: 167 GYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLP-------GEPGLDGIPGRNGM 216
G PG G+PG+ G GP +GD G G G G DG P GEPG G PG G
Sbjct: 1015 GLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKG-DGGPAGSAGATGEPGPRGEPGAPGE 1073
Query: 217 DGIPGKDGL---PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCS 273
+G+ GKDGL PG G+PG +G GE G+ G G G+ G G+PG I +
Sbjct: 1074 EGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGR 1133
Query: 274 LLPNSETSQL 283
L + Q+
Sbjct: 1134 LGKKGDKGQV 1143
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PGL G G GE G +G+ G +G G G G G PGP+G+PG G G G G PG
Sbjct: 975 PGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGT 1034
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
+G G +G+ G KGD G G G G G PG PG +G+ G++G+ G PG GLPG+
Sbjct: 1035 EGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGE 1094
Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
DG G G G G G G G G G+ GTP
Sbjct: 1095 DGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPG 1129
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 80/160 (50%), Gaps = 33/160 (20%)
Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
KG MGV G RG G GP G PGD+G +GPKG+ G GPQG KRG G
Sbjct: 1246 KGHMGVPGLRG------ATGQQGPPGEPGDQGGQGPKGERGSEGPQG------KRGVPGP 1293
Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTNGEKGM 243
G PG + G G PG GL G PG +GM G PGK GLPGK G+PG+ G G G
Sbjct: 1294 SGKPG---IPGVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGS 1350
Query: 244 TGPRGN---------------RGKSGINGVPGTPAICAYK 268
GP+G +G+ G+ G PG P ++
Sbjct: 1351 PGPQGGKGASGPPGSPGAPGPKGEQGLPGQPGVPGQRGHR 1390
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQ---KGEIGAKGEMGVKGERGEKGAPGVVGPPGP---- 150
+QG + + P G G G+ +GE GA GE G++G+ G KGAPG G PG
Sbjct: 1039 GLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDK 1098
Query: 151 --QGIPGDEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
G+PG G G G MG PGP+GI PG G+ G KGD G G G G G PG
Sbjct: 1099 GEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSV 1158
Query: 206 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G +G G G G G GL G +G PG G G +G GP G G G G PG
Sbjct: 1159 GENGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPG 1213
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 89/182 (48%), Gaps = 39/182 (21%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
G QGP G+ G+ G +G G +G G +G GV GP G GIPG G GPKG GYPG
Sbjct: 1259 GQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGFPGPKGLQGYPGVD 1318
Query: 173 GI------PGDEGKRGPKGDMGYPGRIGL------------------------DGRDGLP 202
G+ PG GK+G G G PGR G+ G GLP
Sbjct: 1319 GMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGSPGPQGGKGASGPPGSPGAPGPKGEQGLP 1378
Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT------GPRGNRGKSGIN 256
G+P G+PG+ G G PG GL G G+ G G +G++G+ GPRG G +GI
Sbjct: 1379 GQP---GVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGPEGDAGIV 1435
Query: 257 GV 258
G+
Sbjct: 1436 GI 1437
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 94/204 (46%), Gaps = 54/204 (26%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVK------------------------GERGEKGAPGVVGP 147
PG +G +G+ G G KGE+G + GE+GE+G+PG +GP
Sbjct: 843 PGRKGYMGEPGPEGLKGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPLGP 902
Query: 148 PGPQGI------------------PGDEGKR------GPKGDMGYPGPQGIPGDEGKRGP 183
G +G+ PG G R GPKG G GP G+ GD+G G
Sbjct: 903 QGEKGVMGYPGPPGAPGPMGPLGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGA 962
Query: 184 KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGT 237
KG+ G G+ GL G G G PG G+ G+ G G+PG G PG G+PG G
Sbjct: 963 KGEKGNQGKRGLPGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGL 1022
Query: 238 NGEKGMTGPRGNRGKSGINGVPGT 261
GE G+ GP G G SG+ G PG
Sbjct: 1023 PGEMGVEGPPGTEGDSGLQGEPGA 1046
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 95/203 (46%), Gaps = 36/203 (17%)
Query: 97 VAMQGFCNSTKEYCPPGL------QGPIGQKGEIGAKGEMGVKGERG------------- 137
V QG T E P GL G IG+KGE G+ G +G +GE+G
Sbjct: 861 VGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGP 920
Query: 138 -----------EKGAPGVVGPPG------PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGK 180
+GAPG GP G P G+ GD+G G KG+ G G +G+PG GK
Sbjct: 921 MGPLGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGLPGK 980
Query: 181 RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
G G+ G G+ G G G G+ G G PG G+ GI G G G +G PGT G +G
Sbjct: 981 AGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGL 1040
Query: 241 KGMTGPRGNRGKSGINGVPGTPA 263
+G G +G+ G +G G G P
Sbjct: 1041 QGEPGAKGDGGPAGSAGATGEPG 1063
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 71/131 (54%)
Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
+G G+ G G G PG+ GP GP+G PG + G+ G PG G+ G G +G KG
Sbjct: 531 RGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGAKGL 590
Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
G+PG GL G GLPG G G PG G G+ G +G PG G+ G G+ GE G GP
Sbjct: 591 KGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGP 650
Query: 247 RGNRGKSGING 257
G RG G+ G
Sbjct: 651 EGERGTPGVRG 661
Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 95/223 (42%), Gaps = 70/223 (31%)
Query: 111 PPGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP----- 162
P G+ G GQ+G +G KG++G GE G +G PG VG GP+G G G GP
Sbjct: 1121 PEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMG 1180
Query: 163 ----------KGDMGYPGPQGIPGDEGKRG-P---------------------------- 183
+G G PGP G+PG +G++G P
Sbjct: 1181 PEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPPGEPGPMGEQGETGEH 1240
Query: 184 -----KGDMGYPGRIGLDGRDGLPGEP------------------GLDGIPGRNGMDGIP 220
KG MG PG G G+ G PGEP G G+PG +G GIP
Sbjct: 1241 GEEGYKGHMGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIP 1300
Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G G PG G+ G G +G G G G GK G+ GVPG+P
Sbjct: 1301 GVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPG 1343
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 94/222 (42%), Gaps = 67/222 (30%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYP 169
G G G GE G KGEMG+ G G G PG +G PGP+GI PG G+ G KGD G
Sbjct: 1084 GAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQV 1143
Query: 170 GP------QGIPGDEGKRGPKGDMGYPGRI------GLDGRDGLP------GEPGLDGIP 211
GP +G PG G+ GPKG G G + G +G G+P G+PG G+P
Sbjct: 1144 GPTGEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLP 1203
Query: 212 GRNGMDGIPGKD----------------------------------------------GL 225
G G G PG+D G
Sbjct: 1204 GPKGEKGYPGEDSTVLGPPGPPGEPGPMGEQGETGEHGEEGYKGHMGVPGLRGATGQQGP 1263
Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
PG+ G G G GE+G GP+G RG G +G PG P + +
Sbjct: 1264 PGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGF 1305
Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 94/203 (46%), Gaps = 45/203 (22%)
Query: 97 VAMQGFCNSTKEYCPPGL------QGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP 150
+ + G +T + PPG QGP G++G G +G+ GV G G+ G PGV G PGP
Sbjct: 1249 MGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGFPGP 1308
Query: 151 ---QGIPGDEGKRGPKGDMGYPGPQG---IPGDEGKRG---------------------- 182
QG PG +G G G G PG QG +PG G+ G
Sbjct: 1309 KGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGSPGPQGGKGASGPPGSPGA 1368
Query: 183 --PKGDMGYPGRIGLDGRDG---LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
PKG+ G PG+ G+ G+ G PG+ GL G PG G G G GL G G PG G
Sbjct: 1369 PGPKGEQGLPGQPGVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGP 1428
Query: 238 NGEKGMT------GPRGNRGKSG 254
G+ G+ GP G RG +G
Sbjct: 1429 EGDAGIVGIVGPKGPIGQRGNTG 1451
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PGL GP G KG+ G GE+G+ PG++G GP PG +G +G KG G PG
Sbjct: 546 PGLPGPKGPKGDPGLSPGQAASGEKGD---PGLLGLVGP---PGLQGAKGLKGHPGLPGL 599
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
+G G G G G GYPGR GL G +G PG G+ G G G G G +G G G+
Sbjct: 600 RGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGPEGERGTPGV 659
Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G G +G G G+RG +G++G PG
Sbjct: 660 RGKKGPKGRQGFPGDFGDRGPAGLDGSPG 688
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 84/193 (43%), Gaps = 51/193 (26%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGD------- 165
GL GP G +G G KG G+ G RGE G PG+ G G G PG +G GP+G+
Sbjct: 577 GLVGPPGLQGAKGLKGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVR 636
Query: 166 -----------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG-------- 206
+G G +G PG GK+GPKG G+PG G G GL G PG
Sbjct: 637 GFIGSPGEVGQLGPEGERGTPGVRGKKGPKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPP 696
Query: 207 -------------------------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
L G G +G+ G G+ G+ G+ G PG G G
Sbjct: 697 GFPGVTGSVGPAGPTGPPGAPGPMGLSGSRGPSGIKGDKGEQGVAGEPGEPGYPGDKGNI 756
Query: 242 GMTGPRGNRGKSG 254
G GP G RGKSG
Sbjct: 757 GSPGPPGIRGKSG 769
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 87/165 (52%), Gaps = 24/165 (14%)
Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQG 173
L+G G++G IG GE+G +G+ G KG +G PGP+G+ G+ G +G G G GP G
Sbjct: 821 LKGTQGEEGPIGPFGELGSRGKPGRKG---YMGEPGPEGLKGEVGDQGDIGKTGETGPVG 877
Query: 174 IPGD---EGKRGPKGDMGYPGRIGLDGRDGLPGE---------------PGLDGIPGRNG 215
+PG+ G G KG+ G PG +G G G+ G PGL G G G
Sbjct: 878 LPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPLGLPGLVGARGAPG 937
Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G+ G G DG+ G G +G KG +GN+GK G+ G+PG
Sbjct: 938 SPGPKGQRGPRGPDGLAGDQGGHGAKGE---KGNQGKRGLPGLPG 979
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY------------PGRIGLDGRDGLPGEPG 206
KRGP+G G G G+PG G +GPKGD G PG +GL G GL G G
Sbjct: 530 KRGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGAKG 589
Query: 207 LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
L G P G+ G+ G+ GLPG G G+ G G +G+ GP GN G G+ G G+P
Sbjct: 590 LKGHP---GLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPG 643
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 88/188 (46%), Gaps = 48/188 (25%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG---VVGPPGPQGI---------------- 153
G +GP G KG+ KGE GV GE GE G PG +G PGP GI
Sbjct: 724 GSRGPSGIKGD---KGEQGVAGEPGEPGYPGDKGNIGSPGPPGIRGKSGPSGQPGDPGPQ 780
Query: 154 -----------------PGDEGKRGPKGDMG---YPGPQGIPGDEGKRGPKGDMGYPGRI 193
PG G GPKG +G PGP G+ G +G+ GP G G G
Sbjct: 781 GPSGPPGPEGFPGDIGIPGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEGPIGPFGELGSR 840
Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGMTGPR 247
G GR G GEPG +G+ G G G GK GLPG+ GI G+ G GE+G GP
Sbjct: 841 GKPGRKGYMGEPGPEGLKGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPL 900
Query: 248 GNRGKSGI 255
G +G+ G+
Sbjct: 901 GPQGEKGV 908
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 83/180 (46%), Gaps = 33/180 (18%)
Query: 112 PGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
PG GP G KG +G +G G +KG +GE+G P GP G G GK G KG MG
Sbjct: 798 PGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEG------PIGPFGELGSRGKPGRKGYMGE 851
Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
PGP+G+ +G GD G G+ G G GLPGE G+ G G G G PG G G+
Sbjct: 852 PGPEGL------KGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGE 905
Query: 229 DGI------------------PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
G+ PG G G G GP+G RG G +G+ G K E
Sbjct: 906 KGVMGYPGPPGAPGPMGPLGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGE 965
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 97/249 (38%), Gaps = 75/249 (30%)
Query: 97 VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGI 153
+ G+ P G G G +G IG+ GE+G G GE+G PGV G GP QG
Sbjct: 612 IGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGPEGERGTPGVRGKKGPKGRQGF 671
Query: 154 PGDEGKRGPKGDMGYPG---------------------------------------PQGI 174
PGD G RGP G G PG P GI
Sbjct: 672 PGDFGDRGPAGLDGSPGLVGGTGPPGFPGVTGSVGPAGPTGPPGAPGPMGLSGSRGPSGI 731
Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-------------------------- 208
GD+G++G G+ G PG G G G PG PG+
Sbjct: 732 KGDKGEQGVAGEPGEPGYPGDKGNIGSPGPPGIRGKSGPSGQPGDPGPQGPSGPPGPEGF 791
Query: 209 ----GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVPGT 261
GIPG+NG +G G G G G PG GT GE+G GP G+RGK G G G
Sbjct: 792 PGDIGIPGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEGPIGPFGELGSRGKPGRKGYMGE 851
Query: 262 PAICAYKRE 270
P K E
Sbjct: 852 PGPEGLKGE 860
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 121 KGEIGAKGEMGVKGERGEKGAP---GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
KGE G G+ GV G+RG +G P G+ G PG +G PG+ G +G G G+PGP+G GD
Sbjct: 1372 KGEQGLPGQPGVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGPEGD 1431
Query: 178 E---GKRGPKGDMGYPGRIGLDGRD 199
G GPKG +G G G GR+
Sbjct: 1432 AGIVGIVGPKGPIGQRGNTGPLGRE 1456
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 133 KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
KGE+G G PGV G G +G PGD+G R G PG +G PG+ G +G G G+PG
Sbjct: 1372 KGEQGLPGQPGVPGQRGHRGTPGDQGLR------GAPGLKGQPGEHGDQGLAGFQGFPGP 1425
Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
G +G G+ G G G G+ G G G++
Sbjct: 1426 RGPEGDAGIVGIVGPKGPIGQRGNTGPLGRE 1456
>sp|P12109|CO6A1_HUMAN Collagen alpha-1(VI) chain OS=Homo sapiens GN=COL6A1 PE=1 SV=3
Length = 1028
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 97/213 (45%), Gaps = 63/213 (29%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
PPGL+G G +GE +G+ G+ GE+GE G PG G GP G G +G++G +G+ G G
Sbjct: 258 PPGLRGDPGFEGE---RGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRG 314
Query: 171 PQGIPGDEGKR------GPKGDMGYPGRIGLDGRDGL---------------------PG 203
P+G G++GKR G KG+MGYPG G G G G
Sbjct: 315 PKGYKGEKGKRGIDGVDGVKGEMGYPGLPGCKGSPGFDGIQGPPGPKGDPGAFGLKGEKG 374
Query: 204 EPGLDGIPGRNGMDG------------------IPGKDGLPGKDGI-------------- 231
EPG DG GR G G G +G PG DG
Sbjct: 375 EPGADGEAGRPGSSGPSGDEGQPGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGERGPRG 434
Query: 232 -PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
PGT G G+ G GP+G++G+ G GVPG P
Sbjct: 435 TPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPG 467
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 79/187 (42%), Gaps = 52/187 (27%)
Query: 119 GQKGEIGAKGEMGVKGERGEKG---------------APGVVGPPGPQGIPGDE------ 157
G+KGE GA GE G G G G G G PGP G PG+
Sbjct: 371 GEKGEPGADGEAGRPGSSGPSGDEGQPGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGER 430
Query: 158 ------GKRGPKGDMGYPGPQ---------GIPGDEGKRGPKGDMGYPGRIGLDGRD--- 199
G RGP+GD G GPQ G+PGD G+ GP G GY G G G +
Sbjct: 431 GPRGTPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGSEGAR 490
Query: 200 ------------GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
GL GE G DG P NG +G PG G PG G PG NGT G G+ G
Sbjct: 491 GAPGPAGPPGDPGLMGERGEDG-PAGNGTEGFPGFPGYPGNRGAPGINGTKGYPGLKGDE 549
Query: 248 GNRGKSG 254
G G G
Sbjct: 550 GEAGDPG 556
Score = 42.0 bits (97), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 43/95 (45%), Gaps = 23/95 (24%)
Query: 112 PGLQGPIGQKGEIGAKGEMG------------------VKGERGEKGAP--GVVGPPGPQ 151
PG GPIG KG G +G G + GERGE G G G PG
Sbjct: 466 PGEAGPIGPKGYRGDEGPPGSEGARGAPGPAGPPGDPGLMGERGEDGPAGNGTEGFPGFP 525
Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
G PG+ G G G GYP G+ GDEG+ G GD
Sbjct: 526 GYPGNRGAPGINGTKGYP---GLKGDEGEAGDPGD 557
>sp|P02457|CO1A1_CHICK Collagen alpha-1(I) chain OS=Gallus gallus GN=COL1A1 PE=1 SV=3
Length = 1453
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
P G GP G GE GA G G G +GE G GV GPPGP G +EGKRG +G+ PG
Sbjct: 412 PSGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAG---EEGKRGARGE---PG 465
Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
P G+PG G+RG G G+PG G+ G G PGE G PG G G PG+ G PG+ G
Sbjct: 466 PAGLPGPAGERGAPGSRGFPGADGIAGPKGPPGE---RGSPGAVGPKGSPGEAGRPGEAG 522
Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
+PG G G G GP G G G G
Sbjct: 523 LPGAKGLTGSPGSPGPDGKTGPPGPAG 549
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
G+ GAKG G G G G PG GP GPQG G G +G G+ G PG +G G +G+
Sbjct: 381 GQPGAKGATGAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNSGEPGAPGNKGDTGAKGEP 440
Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
GP G G PG G +G+ G GEPG G+PG G G PG G PG DGI G G GE+
Sbjct: 441 GPAGVQGPPGPAGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGADGIAGPKGPPGER 500
Query: 242 ---GMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
G GP+G+ G++G G G P S P+ +T PP G +
Sbjct: 501 GSPGAVGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTG----PPGPAGQD 551
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 82/176 (46%), Gaps = 21/176 (11%)
Query: 100 QGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
+G + E P G+QGP G GE G +G G G G G G G PG +G PG +G
Sbjct: 431 KGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGADGI 490
Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
GPK G PG +G PG G +G G+ G PG GL G GL G PG G G+ G G
Sbjct: 491 AGPK---GPPGERGSPGAVGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGP 547
Query: 220 PGKD------------------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
G+D G PG G G G GE+G GP G G +G +G
Sbjct: 548 AGQDGRPGPAGPPGARGQAGVMGFPGPKGAAGEPGKPGERGAPGPPGAVGAAGKDG 603
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 101/257 (39%), Gaps = 90/257 (35%)
Query: 97 VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV------KGERGEKGAPGVVGP--- 147
+G + E P GL GP G++G G++G G KG GE+G+PG VGP
Sbjct: 452 AGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGADGIAGPKGPPGERGSPGAVGPKGS 511
Query: 148 ------------PGPQGI------PGDEGKRGPKGD---------------------MGY 168
PG +G+ PG +GK GP G MG+
Sbjct: 512 PGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPAGPPGARGQAGVMGF 571
Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---------------GEPGLDGIPGR 213
PGP+G G+ GK G +G G PG +G G+DG GE G G PG
Sbjct: 572 PGPKGAAGEPGKPGERGAPGPPGAVGAAGKDGEAGAQGPPGPTGPAGERGEQGPAGAPGF 631
Query: 214 NGMDGI---------PGKDGLPGKDGIPGTNGTNGEKGMTGPR----------------- 247
G+ G PG+ G+PG G PG G GE+G G R
Sbjct: 632 QGLPGPAGPPGEAGKPGEQGVPGNAGAPGPAGARGERGFPGERGVQGPPGPQGPRGANGA 691
Query: 248 -GNRGKSGINGVPGTPA 263
GN G G G PG P
Sbjct: 692 PGNDGAKGDAGAPGAPG 708
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 82/179 (45%), Gaps = 36/179 (20%)
Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG------------IPGDEGKRGPKGD 165
+G G GA GE G GERG G PG VG G G G+ G++GP G
Sbjct: 569 MGFPGPKGAAGEPGKPGERGAPGPPGAVGAAGKDGEAGAQGPPGPTGPAGERGEQGPAGA 628
Query: 166 MGY---------------PGPQGIPGDEGKRGP---KGDMGYPGR------IGLDGRDGL 201
G+ PG QG+PG+ G GP +G+ G+PG G G G
Sbjct: 629 PGFQGLPGPAGPPGEAGKPGEQGVPGNAGAPGPAGARGERGFPGERGVQGPPGPQGPRGA 688
Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G PG DG G G G PG +G PG +G+PG G G G G RG+ G G +G PG
Sbjct: 689 NGAPGNDGAKGDAGAPGAPGNEGPPGLEGMPGERGAAGLPGAKGDRGDPGPKGADGAPG 747
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 83/184 (45%), Gaps = 48/184 (26%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGV---------------KGERGEKG 140
++ G + E PG +G G G +GA G+ G +GE+G G
Sbjct: 568 VMGFPGPKGAAGEPGKPGERGAPGPPGAVGAAGKDGEAGAQGPPGPTGPAGERGEQGPAG 627
Query: 141 APGVVG------------PPGPQGIPGDEGKRGP---KGDMGYPGPQ------------- 172
APG G PG QG+PG+ G GP +G+ G+PG +
Sbjct: 628 APGFQGLPGPAGPPGEAGKPGEQGVPGNAGAPGPAGARGERGFPGERGVQGPPGPQGPRG 687
Query: 173 --GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---GKDGLPG 227
G PG++G +G G G PG G G +G+PGE G G+PG G G P G DG PG
Sbjct: 688 ANGAPGNDGAKGDAGAPGAPGNEGPPGLEGMPGERGAAGLPGAKGDRGDPGPKGADGAPG 747
Query: 228 KDGI 231
KDG+
Sbjct: 748 KDGL 751
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 88/212 (41%), Gaps = 58/212 (27%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGDEGKRGPKGDMGY 168
PG++G G G GAKG+ G G +GE G+PG G PG P+G+PG+ G+ GP G G
Sbjct: 251 PGMKGHRGFSGLDGAKGQPGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGA 310
Query: 169 ---------------------------------PGPQGIPGDEGKRGPKGDM-------- 187
GPQG G EG +G +G+
Sbjct: 311 RGNDGAPGAAGPPGPTGPAGPPGFPGAAGAKGETGPQGARGSEGPQGSRGEPGPPGPAGA 370
Query: 188 ----------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
G PG G G G+ G PG PG G G G G PG G G G
Sbjct: 371 AGPAGNPGADGQPGAKGATGAPGIAGAPGF---PGARGPSGPQGPSGAPGPKGNSGEPGA 427
Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYKR 269
G KG TG +G G +G+ G PG PA KR
Sbjct: 428 PGNKGDTGAKGEPGPAGVQGPPG-PAGEEGKR 458
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 67/151 (44%), Gaps = 36/151 (23%)
Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
G GE G+ G PG GPPGPQG G PG G+PG +G RG G G
Sbjct: 219 GDDGEAGKPGRPGQRGPPGPQGA------------RGLPGTAGLPGMKGHRGFSGLDGAK 266
Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN------------ 238
G+ G G G PG PG +G PG+ G G+PG+ G PG G G G +
Sbjct: 267 GQPGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGARGNDGAPGAAGPPGPT 326
Query: 239 ------------GEKGMTGPRGNRGKSGING 257
G KG TGP+G RG G G
Sbjct: 327 GPAGPPGFPGAAGAKGETGPQGARGSEGPQG 357
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 80/228 (35%), Gaps = 72/228 (31%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG----------------- 155
G GP G KGE G+ GE G G+ G +G PG G PGP G G
Sbjct: 267 GQPGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGARGNDGAPGAAGPPGPT 326
Query: 156 -------------DEGKRGPKGDMGYPGPQG----------------------------- 173
+G+ GP+G G GPQG
Sbjct: 327 GPAGPPGFPGAAGAKGETGPQGARGSEGPQGSRGEPGPPGPAGAAGPAGNPGADGQPGAK 386
Query: 174 -------------IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
PG G GP+G G PG G G G PG G G G G G+
Sbjct: 387 GATGAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAGVQ 446
Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G G G++G G G G G+ GP G RG G G PG I K
Sbjct: 447 GPPGPAGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGADGIAGPK 494
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 80/198 (40%), Gaps = 54/198 (27%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
PPG QG G G G G G +G G GA G GP GP+G PG G+ G G MG
Sbjct: 235 PPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGQPGPAGPKGEPGSPGENGAPGQMG--- 291
Query: 171 PQGIPGDEGKRGP------------------------------------KGDMGYPGRIG 194
P+G+PG+ G+ GP KG+ G G G
Sbjct: 292 PRGLPGERGRPGPSGPAGARGNDGAPGAAGPPGPTGPAGPPGFPGAAGAKGETGPQGARG 351
Query: 195 LDGRDGLPGE---------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG 239
+G G GE PG DG PG G G PG G PG G G +G G
Sbjct: 352 SEGPQGSRGEPGPPGPAGAAGPAGNPGADGQPGAKGATGAPGIAGAPGFPGARGPSGPQG 411
Query: 240 EKGMTGPRGNRGKSGING 257
G GP+GN G+ G G
Sbjct: 412 PSGAPGPKGNSGEPGAPG 429
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
G+ G G G GA+GE G GERG +G PG GP G G PG++G +G G G PG +
Sbjct: 651 GVPGNAGAPGPAGARGERGFPGERGVQGPPGPQGPRGANGAPGNDGAKGDAGAPGAPGNE 710
Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
G PG EG G +G G PG G G PG G DG PG++G+ G+
Sbjct: 711 GPPGLEGMPGERGAAGLPG---AKGDRGDPGPKGADGAPGKDGLRGL 754
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNR 250
G DG G PG PG G PG G G+PG GLP G G G +G G+ G GP+G
Sbjct: 219 GDDGEAGKPGRPGQRGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGQPGPAGPKGEP 278
Query: 251 GKSGINGVPG 260
G G NG PG
Sbjct: 279 GSPGENGAPG 288
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
GD G G G PG G GP+G G PG GL PG+ G G +G+DG G+
Sbjct: 219 GDDGEAGKPGRPGQRGPPGPQGARGLPGTAGL---------PGMKGHRGFSGLDGAKGQP 269
Query: 224 GLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGT 261
G G G PG+ G NG G GPR G RG+ G +G G
Sbjct: 270 GPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGA 310
Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 27/98 (27%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK-------- 163
PG GP G G+ +G +G+ G+RGE+G PG+ PGP G PG +G G
Sbjct: 935 PGTPGPQGIAGQ---RGVVGLPGQRGERGFPGL---PGPSGEPGKQGPSGASGERGPPGP 988
Query: 164 -------------GDMGYPGPQGIPGDEGKRGPKGDMG 188
G G PG +G PG +G GPKGD G
Sbjct: 989 MGPPGLAGPPGEAGREGAPGAEGAPGRDGAAGPKGDRG 1026
Score = 40.0 bits (92), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 74/184 (40%), Gaps = 48/184 (26%)
Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---------KRGPKGDMG- 167
+G G GA+G G G G GA G VGPPGP G G G +GP+G+ G
Sbjct: 845 VGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNIGLPGPPGPAGKZGSKGPRGETGP 904
Query: 168 -----------------------YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
GP G PG G +G G G G G G G PG
Sbjct: 905 AGRPGEPGPAGPPGPPGEKGSPGADGPIGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL 964
Query: 205 PGLDGIPGRNGMDGIPGKDGL---------------PGKDGIPGTNGTNGEKGMTGPRGN 249
PG G PG+ G G G+ G G++G PG G G G GP+G+
Sbjct: 965 PGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGEAGREGAPGAEGAPGRDGAAGPKGD 1024
Query: 250 RGKS 253
RG++
Sbjct: 1025 RGET 1028
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 74/178 (41%), Gaps = 60/178 (33%)
Query: 122 GEIGAKGEMGVKGERGE------------------------KGAPGVVGPPGPQGIPGDE 157
G+ GAKGE G G +G+ KGA G GPPG G PG
Sbjct: 810 GQPGAKGETGDAGAKGDAGPPGPAGPTGAPGPAGZVGAPGPKGARGSAGPPGATGFPGAA 869
Query: 158 GKRGPKGDMGYPGPQ---------GIPGDEGKRGPKGDMG------------------YP 190
G+ GP PGP G G ZG +GP+G+ G
Sbjct: 870 GRVGP------PGPSGNIGLPGPPGPAGKZGSKGPRGETGPAGRPGEPGPAGPPGPPGEK 923
Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
G G DG G PG PG GI G+ G+ G+PG+ G+ G PG G +GE G GP G
Sbjct: 924 GSPGADGPIGAPGTPGPQGIAGQRGVVGLPGQR---GERGFPGLPGPSGEPGKQGPSG 978
>sp|P02461|CO3A1_HUMAN Collagen alpha-1(III) chain OS=Homo sapiens GN=COL3A1 PE=1 SV=4
Length = 1466
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 74/128 (57%)
Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
KGEMG G G G G GPPGP G G G RG G+ G G +G PG G+RG G
Sbjct: 395 KGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGI 454
Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
G PG G DG+DG PGEPG +G+PG G G PG G G +GIPG G GE+G GP
Sbjct: 455 PGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGP 514
Query: 247 RGNRGKSG 254
G RG +G
Sbjct: 515 AGPRGAAG 522
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP-------- 147
L+ +G PGL+G G+ G+ GAKGE G +GERGE G PGV G
Sbjct: 409 LMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDG 468
Query: 148 ----PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
PG G+PG G+RG G G GP GIPG+ +GP G+ G PG G G G
Sbjct: 469 SPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGE---KGPAGERGAPGPAGP---RGAAG 522
Query: 204 EPGLDGI 210
EPG DG+
Sbjct: 523 EPGRDGV 529
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 88/214 (41%), Gaps = 63/214 (29%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
PPG++GP G G G KG G G GEKG G G G G+PG+ G GP G G PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306
Query: 171 PQ---GIPGDEGKR---------------------------GPKGDMGYPGRIGLDGRDG 200
+ G+PG G R G KG++G G G +G G
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG 366
Query: 201 LPGEP------------------------------GLDGIPGRNGMDGIP---GKDGLPG 227
GEP G+ G PG G G P G +G PG
Sbjct: 367 QRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPG 426
Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
G G G NG KG GPRG RG++GI GVPG
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGA 460
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 81/186 (43%), Gaps = 39/186 (20%)
Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
G+ G G G GERG G PG+ GP G G PG +G RG G G G G PG +G+
Sbjct: 228 GKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGEN 287
Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------------------P 220
G G+ G PG +G G G G PGL G G G DG P
Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSP 347
Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGN------------------RGKSGINGVPGTP 262
G G G G PG+NG G++G GP+G+ +G+ G G+PG P
Sbjct: 348 GAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAP 407
Query: 263 AICAYK 268
+ +
Sbjct: 408 GLMGAR 413
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
G DG G PG PG G+PG G+ G G G PG G G +G NGEKG TG G +G+
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGE 286
Query: 253 SGI---NGVPG 260
+G+ NG PG
Sbjct: 287 NGLPGENGAPG 297
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 30/51 (58%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGP 162
PG QGP G KGE G +G G+KG RG G PG G PGP G G G GP
Sbjct: 1085 PGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGP 1135
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 56/145 (38%), Gaps = 57/145 (39%)
Query: 146 GPPGPQG---IPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRG----- 182
GPPGP G PG G GPKGD G PG +G I G G RG
Sbjct: 903 GPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPP 962
Query: 183 -------------PKGDMGYPGRIGLDGR------------DGLPGEPGLDGIPGRNGMD 217
KG+ G PG GL G G GEPG D
Sbjct: 963 GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPG---------RD 1013
Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKG 242
G PG DGLPG+DG PG G GE G
Sbjct: 1014 GNPGSDGLPGRDGSPGGKGDRGENG 1038
Score = 34.7 bits (78), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%)
Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPG 191
+GAPG GP G +G G+ G G KG G+PG G PG G G +G +G PG
Sbjct: 1082 RGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPG 1134
>sp|Q60754|MARCO_MOUSE Macrophage receptor MARCO OS=Mus musculus GN=Marco PE=1 SV=1
Length = 518
Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 95/195 (48%), Gaps = 45/195 (23%)
Query: 112 PGLQGPIGQKGEIGA---------KGEMGVKGERGEKGAPGVVGPPGPQGI---PGDEGK 159
PGL GP +KGE GA +G G G +GE G G+ G PG QG PG G+
Sbjct: 167 PGLPGPAAEKGEKGAAGRDGTPGVQGPQGPPGSKGEAGLQGLTGAPGKQGATGAPGPRGE 226
Query: 160 RGPKGDMGYPGPQG------------IPGDEGKRGPKGD---MGYPGRIGLDGRDGLPGE 204
+G KGD+G GP+G +PG++G G KGD MG PG G G G PG
Sbjct: 227 KGSKGDIGLTGPKGEHGTKGDKGDLGLPGNKGDMGMKGDTGPMGSPGAQGGKGDAGKPGL 286
Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT------------------GP 246
PGL G PG G G PG G+PG G PG +G GE G T G
Sbjct: 287 PGLAGSPGVKGDQGKPGVQGVPGPQGAPGLSGAKGEPGRTGLPGPAGPPGIAGNPGIAGV 346
Query: 247 RGNRGKSGINGVPGT 261
+G++G +GI G GT
Sbjct: 347 KGSKGDTGIQGQKGT 361
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 88/166 (53%), Gaps = 18/166 (10%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGYP 169
GLQG G G+ GA G G +GE+G KG G+ GP G G GD+G G KGDMG
Sbjct: 204 GLQGLTGAPGKQGATGAPGPRGEKGSKGDIGLTGPKGEHGTKGDKGDLGLPGNKGDMGMK 263
Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLP 226
G G G G +G KGD G PG GL G G+ G+ PG+ G+PG G G+ G G P
Sbjct: 264 GDTGPMGSPGAQGGKGDAGKPGLPGLAGSPGVKGDQGKPGVQGVPGPQGAPGLSGAKGEP 323
Query: 227 GKDGI------------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G+ G+ PG G G KG TG +G +G G +GVPG
Sbjct: 324 GRTGLPGPAGPPGIAGNPGIAGVKGSKGDTGIQGQKGTKGESGVPG 369
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 88/166 (53%), Gaps = 18/166 (10%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRG-------- 161
GL GP G+ G G KG++G+ G +G+ G G GP PG QG GD GK G
Sbjct: 234 GLTGPKGEHGTKGDKGDLGLPGNKGDMGMKGDTGPMGSPGAQGGKGDAGKPGLPGLAGSP 293
Query: 162 -PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL---DGRDGLPGEPGLDGIPGRNGMD 217
KGD G PG QG+PG +G G G G PGR GL G G+ G PG+ G+ G G
Sbjct: 294 GVKGDQGKPGVQGVPGPQGAPGLSGAKGEPGRTGLPGPAGPPGIAGNPGIAGVKGSKGDT 353
Query: 218 GIPGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
GI G+ G G+ G+P G G G G+ GP+G G+ G G PG
Sbjct: 354 GIQGQKGTKGESGVPGLVGRKGDTGSPGLAGPKGEPGRVGQKGDPG 399
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 94/195 (48%), Gaps = 30/195 (15%)
Query: 97 VAMQGFCNSTKEYCPPGLQGPIGQKGE------IGAKGEMGVKGERGEKGAPGVVGPPGP 150
+QG + + G GP G+KG G KGE G KG++G+ G PG
Sbjct: 203 AGLQGLTGAPGKQGATGAPGPRGEKGSKGDIGLTGPKGEHGTKGDKGDLGLPGNK----- 257
Query: 151 QGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
GD G +G G MG PG QG GD GK G G G PG G G+ G+ G PG G
Sbjct: 258 ----GDMGMKGDTGPMGSPGAQGGKGDAGKPGLPGLAGSPGVKGDQGKPGVQGVPGPQGA 313
Query: 211 PGRNGMDGIPGKDGLPGKD---------GIPGTNGTNGEKGMTGPRGNRGKSGINGV--- 258
PG +G G PG+ GLPG GI G G+ G+ G+ G +G +G+SG+ G+
Sbjct: 314 PGLSGAKGEPGRTGLPGPAGPPGIAGNPGIAGVKGSKGDTGIQGQKGTKGESGVPGLVGR 373
Query: 259 ---PGTPAICAYKRE 270
G+P + K E
Sbjct: 374 KGDTGSPGLAGPKGE 388
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 71/138 (51%)
Query: 127 KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD 186
KGE G G +G GAPG+ G PGP G++G G G G GPQG PG +G+ G +G
Sbjct: 149 KGERGSPGPKGAPGAPGIPGLPGPAAEKGEKGAAGRDGTPGVQGPQGPPGSKGEAGLQGL 208
Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGP 246
G PG+ G G G GE G G G G G G G G G+PG G G KG TGP
Sbjct: 209 TGAPGKQGATGAPGPRGEKGSKGDIGLTGPKGEHGTKGDKGDLGLPGNKGDMGMKGDTGP 268
Query: 247 RGNRGKSGINGVPGTPAI 264
G+ G G G G P +
Sbjct: 269 MGSPGAQGGKGDAGKPGL 286
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 83/159 (52%), Gaps = 6/159 (3%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
G T PG QG G G+ G G G G +G++G PGV G PGPQG PG G +
Sbjct: 261 GMKGDTGPMGSPGAQGGKGDAGKPGLPGLAGSPGVKGDQGKPGVQGVPGPQGAPGLSGAK 320
Query: 161 GPKGDMGYPGPQGI------PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
G G G PGP G PG G +G KGD G G+ G G G+PG G G G
Sbjct: 321 GEPGRTGLPGPAGPPGIAGNPGIAGVKGSKGDTGIQGQKGTKGESGVPGLVGRKGDTGSP 380
Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
G+ G G+ G G+ G PG G++G++G G +G +G+S
Sbjct: 381 GLAGPKGEPGRVGQKGDPGMKGSSGQQGQKGEKGQKGES 419
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY---- 168
G +G G KG GA G G+ G EKG G G G G+ G +G G KG+ G
Sbjct: 150 GERGSPGPKGAPGAPGIPGLPGPAAEKGEKGAAGRDGTPGVQGPQGPPGSKGEAGLQGLT 209
Query: 169 --PGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
PG Q G PG G++G KGD+G G G G G G+ GL G G GM G G
Sbjct: 210 GAPGKQGATGAPGPRGEKGSKGDIGLTGPKGEHGTKGDKGDLGLPGNKGDMGMKGDTGPM 269
Query: 224 GLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGINGVP---GTPAICAYKRE 270
G PG G G G G G+ G +G++GK G+ GVP G P + K E
Sbjct: 270 GSPGAQGGKGDAGKPGLPGLAGSPGVKGDQGKPGVQGVPGPQGAPGLSGAKGE 322
Score = 38.5 bits (88), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
+ G G PG G G P G+ G+PG G+ G G +GT G +G GP G++G++G
Sbjct: 148 IKGERGSPGPKGAPGAP---GIPGLPGPAAEKGEKGAAGRDGTPGVQGPQGPPGSKGEAG 204
Query: 255 INGVPGTPA 263
+ G+ G P
Sbjct: 205 LQGLTGAPG 213
Score = 33.9 bits (76), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 92 SRIP-LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPG 143
S +P LV +G S P G G +GQKG+ G KG G +G++GEKG G
Sbjct: 365 SGVPGLVGRKGDTGSPGLAGPKGEPGRVGQKGDPGMKGSSGQQGQKGEKGQKG 417
>sp|P18503|CAS4_EPHMU Short-chain collagen C4 (Fragment) OS=Ephydatia muelleri PE=2 SV=1
Length = 366
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 92/197 (46%), Gaps = 38/197 (19%)
Query: 136 RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL 195
+G+KG PG G PG G PG +G +G KGD G PGPQG GD+ GPKGD GY G
Sbjct: 69 KGDKGLPGNDGQPGAPGAPGYDGAKGDKGDTGAPGPQGPKGDQ---GPKGDQGYKGDA-- 123
Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN----------------- 238
GLPG+PG G PG++G DG G G G G PG G +
Sbjct: 124 ----GLPGQPGQTGAPGKDGQDGAKGDKGDQGPAGTPGAPGKDGAQGPAGPAGPAGPAGP 179
Query: 239 ----GEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEH 294
G +G GP+G+ G G G PG+ Y R ++ P ET+ V S H
Sbjct: 180 VGPTGPQGPQGPKGDVGPQGPQGAPGSNGAVVYIRWGNNVCPAGETN--------VYSGH 231
Query: 295 IFSSSPIVVREGDNVRL 311
I SS GD + L
Sbjct: 232 IVESSNANDANGDYLCL 248
>sp|A5PN28|OTO1A_DANRE Otolin-1-A OS=Danio rerio GN=otol1a PE=2 SV=1
Length = 489
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 97/187 (51%), Gaps = 41/187 (21%)
Query: 102 FCNSTKEYCPP--GLQGPIGQKGE---------------------IGAKGEMGVKGERGE 138
FC E CPP G GP+G+KG GA G GVKGE+G+
Sbjct: 121 FC----ECCPPERGPPGPVGEKGLPGIPGGKGEMGPPGPPGQEGLTGAPGTHGVKGEKGD 176
Query: 139 KGAPGVVGPPGPQGIPGDEGKRGPKGD---MGYPGPQGIPGDEGK---RGPKGDMGYPGR 192
GA G+ G PG G G++G+ GPKGD G+PG +G PG+ G+ G KG MG PG+
Sbjct: 177 TGASGLPGIPGVTGKQGEKGESGPKGDKGDTGFPGLKGDPGERGEPGWNGTKGGMGEPGK 236
Query: 193 IGLD---GRDGLPGEPGLD-----GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
GL G DG+ GE G G G+ G G PG G G G+PGTNGT+G G
Sbjct: 237 QGLTGPPGPDGIKGEKGDKGDCPFGEKGQKGSIGEPGPQGPKGDPGVPGTNGTDGLPGSK 296
Query: 245 GPRGNRG 251
GP+G+ G
Sbjct: 297 GPKGDPG 303
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 90/177 (50%), Gaps = 32/177 (18%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG--------KRGPK 163
PGL+G G++GE G G KG GE G G+ GPPGP GI G++G ++G K
Sbjct: 210 PGLKGDPGERGEPGWNG---TKGGMGEPGKQGLTGPPGPDGIKGEKGDKGDCPFGEKGQK 266
Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPG---RNGMDGIP 220
G +G PGPQG PKGD G P G +G DGLPG G G PG + G G P
Sbjct: 267 GSIGEPGPQG---------PKGDPGVP---GTNGTDGLPGSKGPKGDPGPLSKQGEPGPP 314
Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPN 277
G G PG+ G+PG GT G KG RG G G G PA+ S L P+
Sbjct: 315 GPQGPPGQRGMPGMKGTRGLKGA------RGIRGFKGFKGEPAVQKRSAFSVGLFPS 365
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 154 PGDEGKRGPKGDMGYPGPQ------------------GIPGDEGKRGPKGDMGYPGRIGL 195
P + G GP G+ G PG G PG G +G KGD G G G+
Sbjct: 126 PPERGPPGPVGEKGLPGIPGGKGEMGPPGPPGQEGLTGAPGTHGVKGEKGDTGASGLPGI 185
Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
G G GE G G G G G PG G PG+ G PG NGT G G G +G G G
Sbjct: 186 PGVTGKQGEKGESGPKGDKGDTGFPGLKGDPGERGEPGWNGTKGGMGEPGKQGLTGPPGP 245
Query: 256 NGVPG 260
+G+ G
Sbjct: 246 DGIKG 250
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
G PG G +G KGD G G G+ G G GE G G G G G PG G PG+ G P
Sbjct: 163 GAPGTHGVKGEKGDTGASGLPGIPGVTGKQGEKGESGPKGDKGDTGFPGLKGDPGERGEP 222
Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G NGT G GM G GK G+ G PG I K
Sbjct: 223 GWNGTKG--GM----GEPGKQGLTGPPGPDGIKGEK 252
>sp|Q641F3|COLA1_XENLA Collagen alpha-1(XXI) chain OS=Xenopus laevis GN=col21a1 PE=2 SV=1
Length = 957
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG+ G G G G KGE G+ GE G +G G G GP+GI G +G GPKG+ G GP
Sbjct: 604 PGIPGIPGNDGANGLKGETGLSGEPGARGPTGTPGISGPEGISGPQGPVGPKGNKGETGP 663
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLPGK 228
G G +G KG+MG PG+ G G GL G G G G GM G G+ G+PG
Sbjct: 664 PGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGNLGERGMQGHKGEHGSSGMPGL 723
Query: 229 DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G G+ GEKG G G+RG +G G PG
Sbjct: 724 KGEHGVTGSKGEKGEIGEHGHRGITGPRGEPG 755
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 87/176 (49%), Gaps = 27/176 (15%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG---Y 168
PG G GQ G G G G G G G+PGV GP G G+ G+ G+ G KGD G +
Sbjct: 463 PGNPGSPGQPGPDGKHGFQGTSGSPGIPGSPGVQGPRGFAGLKGNTGQDGEKGDRGMPGF 522
Query: 169 PGPQGIPGDEGKRGPKGD---------------------MGYPGRIGLDG---RDGLPGE 204
PG G PG +G+ GPKGD G PGR G G +DG+PG
Sbjct: 523 PGLHGQPGIKGEMGPKGDKGDIGIDGKKGTKGDKGGNGATGKPGRHGEPGSYGKDGIPGY 582
Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
PG G G+ G G+ G GLPG GIPG +G NG KG TG G G G G PG
Sbjct: 583 PGQKGEEGKPGPPGMEGLRGLPGIPGIPGNDGANGLKGETGLSGEPGARGPTGTPG 638
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 109 YCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------KRGP 162
Y G+ G GQKGE G G G++G RG G PG+ G G G+ G+ G RGP
Sbjct: 574 YGKDGIPGYPGQKGEEGKPGPPGMEGLRGLPGIPGIPGNDGANGLKGETGLSGEPGARGP 633
Query: 163 KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK 222
G G GP+GI G +G GPKG+ G G G G+ GE G GIPG+ G GIPG
Sbjct: 634 TGTPGISGPEGISGPQGPVGPKGNKGETGPPGKASPAGMKGEKGEMGIPGQQGYTGIPGL 693
Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
G G G GE+GM G +G G SG+ G+ G + K E +
Sbjct: 694 MGPKGD------KGNLGERGMQGHKGEHGSSGMPGLKGEHGVTGSKGEKGEI 739
Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------EGKRGPK 163
GL+G G GE GA+G G G G +G G GP GP+G G+ G +G K
Sbjct: 617 GLKGETGLSGEPGARGPTGTPGISGPEGISGPQGPVGPKGNKGETGPPGKASPAGMKGEK 676
Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
G+MG PG QG G G GPKGD G G G+ G G G G+ G+ G +G+ G G+
Sbjct: 677 GEMGIPGQQGYTGIPGLMGPKGDKGNLGERGMQGHKGEHGSSGMPGLKGEHGVTGSKGEK 736
Query: 224 GLPGKDGIPGTNGTNGEK------GMTGPRGNRGKSGINGVPG 260
G G+ G G G GE G GPRG G+ G G+PG
Sbjct: 737 GEIGEHGHRGITGPRGEPGNMGLIGAPGPRGMSGERGTQGLPG 779
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 80/172 (46%), Gaps = 42/172 (24%)
Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
G KG+ G KG+ G+ G PG G PGP +GK G +G G PG IPG G +GP+
Sbjct: 449 GEKGDPGPKGDSGQPGNPGSPGQPGP------DGKHGFQGTSGSPG---IPGSPGVQGPR 499
Query: 185 GDMGYPGRIGLDGRDG---LPGEPGLDGIPGRNG-------------------------- 215
G G G G DG G +PG PGL G PG G
Sbjct: 500 GFAGLKGNTGQDGEKGDRGMPGFPGLHGQPGIKGEMGPKGDKGDIGIDGKKGTKGDKGGN 559
Query: 216 -MDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G PG+ G P GKDGIPG G GE+G GP G G G+ G+PG P
Sbjct: 560 GATGKPGRHGEPGSYGKDGIPGYPGQKGEEGKPGPPGMEGLRGLPGIPGIPG 611
Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 82/181 (45%), Gaps = 12/181 (6%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG------------APG 143
++G E G+ G G G+ G KGEMG KG++G+ G G
Sbjct: 501 FAGLKGNTGQDGEKGDRGMPGFPGLHGQPGIKGEMGPKGDKGDIGIDGKKGTKGDKGGNG 560
Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
G PG G PG GK G G G G +G PG G G +G G PG G DG +GL G
Sbjct: 561 ATGKPGRHGEPGSYGKDGIPGYPGQKGEEGKPGPPGMEGLRGLPGIPGIPGNDGANGLKG 620
Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
E GL G PG G G PG G G G G G G KG TGP G +G+ G G
Sbjct: 621 ETGLSGEPGARGPTGTPGISGPEGISGPQGPVGPKGNKGETGPPGKASPAGMKGEKGEMG 680
Query: 264 I 264
I
Sbjct: 681 I 681
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 72/140 (51%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
G QGP+G KG G G G G KG G +G PG QG G G GPKGD G G +
Sbjct: 647 GPQGPVGPKGNKGETGPPGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGNLGER 706
Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
G+ G +G+ G G G G G+ G G GE G G G G G PG GL G G
Sbjct: 707 GMQGHKGEHGSSGMPGLKGEHGVTGSKGEKGEIGEHGHRGITGPRGEPGNMGLIGAPGPR 766
Query: 233 GTNGTNGEKGMTGPRGNRGK 252
G +G G +G+ GP+G +GK
Sbjct: 767 GMSGERGTQGLPGPKGQQGK 786
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 91/201 (45%), Gaps = 48/201 (23%)
Query: 112 PGLQGPIGQKGEIGAKGE---------------------MGVKGERGEKGAPGVVGPPGP 150
PGL G G KGE+G KG+ G G GE G+ G G PG
Sbjct: 523 PGLHGQPGIKGEMGPKGDKGDIGIDGKKGTKGDKGGNGATGKPGRHGEPGSYGKDGIPGY 582
Query: 151 QGIPGDEGKRGP---KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGL 207
G G+EGK GP +G G PG GIPG++G G KG+ G G G G G PG G
Sbjct: 583 PGQKGEEGKPGPPGMEGLRGLPGIPGIPGNDGANGLKGETGLSGEPGARGPTGTPGISGP 642
Query: 208 DGI------------------PGR---NGMDGIPGKDGLPGKD---GIPGTNGTNGEKGM 243
+GI PG+ GM G G+ G+PG+ GIPG G G+KG
Sbjct: 643 EGISGPQGPVGPKGNKGETGPPGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGN 702
Query: 244 TGPRGNRGKSGINGVPGTPAI 264
G RG +G G +G G P +
Sbjct: 703 LGERGMQGHKGEHGSSGMPGL 723
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 88/208 (42%), Gaps = 50/208 (24%)
Query: 97 VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
+ +G E+ G+ G G+ G G+KGE G GE G +G G G PG G+ G
Sbjct: 703 LGERGMQGHKGEHGSSGMPGLKGEHGVTGSKGEKGEIGEHGHRGITGPRGEPGNMGLIGA 762
Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD-------------------- 196
G RG G+ G QG+PG +G++G + + +I LD
Sbjct: 763 PGPRGMSGERGT---QGLPGPKGQQGKEQSEAFIRQICLDVLKAQLPSLIQNDIRQNCNQ 819
Query: 197 -----------------------GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
G GLPG G G+ G+ G+ GIPG GLPGK PG
Sbjct: 820 CKTQEGSPGLPGPPGPVGPEGTRGHPGLPGRNGFSGLVGQPGLPGIPGTKGLPGK---PG 876
Query: 234 TNGTNGEKGMTGPRGNRGKSGINGVPGT 261
G G+ GP+G+ G G G+PG
Sbjct: 877 AKGNKGDI-EPGPQGSPGVPGPAGLPGV 903
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
+ QG+ P G +G +G++G G KGE G G G KG GV G G +G G
Sbjct: 681 IPGQQGYTGIPGLMGPKGDKGNLGERGMQGHKGEHGSSGMPGLKGEHGVTGSKGEKGEIG 740
Query: 156 DEGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRD 199
+ G RG G G PG G+ PG G G +G G PG G G++
Sbjct: 741 EHGHRGITGPRGEPGNMGLIGAPGPRGMSGERGTQGLPGPKGQQGKE 787
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG-----LPGKDGIPGTNGTN---- 238
G+PG G +G GL G+PGL GIPG G+ G PG G PG G PG G
Sbjct: 843 GHPGLPGRNGFSGLVGQPGLPGIPGTKGLPGKPGAKGNKGDIEPGPQGSPGVPGPAGLPG 902
Query: 239 -GEKGMTGPRGNRGKSG 254
G+ G TGP G G+ G
Sbjct: 903 VGKDGRTGPLGPPGREG 919
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
L GF + PG+ G G G+ GAKG G E G +G+PGV PGP G+PG
Sbjct: 847 LPGRNGFSGLVGQPGLPGIPGTKGLPGKPGAKGNKGDI-EPGPQGSPGV---PGPAGLPG 902
Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKR 181
G G GP G PG EG R
Sbjct: 903 -------VGKDGRTGPLGPPGREGDR 921
>sp|Q8IZC6|CORA1_HUMAN Collagen alpha-1(XXVII) chain OS=Homo sapiens GN=COL27A1 PE=2 SV=1
Length = 1860
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 93/167 (55%), Gaps = 16/167 (9%)
Query: 133 KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
+G+RGE G PG G G QG+ PG +G+ G G G+PGP+G G EG +G +G G
Sbjct: 1354 RGDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGA 1413
Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT---NGEKGMTGP 246
PGR G+ G GLPG G+ GR G++GI G DGLPG+DG G G +G+ G GP
Sbjct: 1414 PGRRGVQGLQGLPGP---RGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGP 1470
Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
G RG G+ G+PG +K ES LP L PP G+E
Sbjct: 1471 AGKRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1510
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 43 DKGDIFDNSVPQTPHVEFVPPDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGF 102
D+GD + P P E V + +R + +Q H P W G
Sbjct: 1353 DRGDRGEPGDPGYPGQEGV-----QGLRGKPGQQGQPGHPGPRGW------------PGP 1395
Query: 103 CNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG------- 155
S P G QG G G G +G G+ G RG G G+ G GP G+PG
Sbjct: 1396 KGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQ 1455
Query: 156 --------DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI------GLDGRDGL 201
D G GP G G PG G+PG +G G KG+ G PG++ G +GR GL
Sbjct: 1456 QGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGL 1515
Query: 202 P---GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
P GEPG G PG +G G PG GL G G PG G G +G GP G GK GI G
Sbjct: 1516 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVG 1574
Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 87/162 (53%), Gaps = 21/162 (12%)
Query: 121 KGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGD---MGYPGPQGI 174
K GAKG+MG+ G G G PG G PGP G PG++G+ GP+G GYPG QG+
Sbjct: 684 KAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGL 743
Query: 175 PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
PG G GPKG GY G GL G G GE GL G+PG+ G G+PG G+ G+ G PG
Sbjct: 744 PGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGL 803
Query: 235 NGTNGEK---------------GMTGPRGNRGKSGINGVPGT 261
+G GE G+ GP G G G+ G+ G+
Sbjct: 804 DGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGS 845
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 80/143 (55%), Gaps = 12/143 (8%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
PG GP G++G G G G +G +GE G PG +GPPG KRG +G G
Sbjct: 1465 PGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPG---------KRGTEGRTGL 1515
Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
PG QG PG +G+ G G+MG+PG GL G G PG+ G GI G G G+ GK+G+ G
Sbjct: 1516 PGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGP 1575
Query: 229 DGIPGTNGTNGEKGMTGPRGNRG 251
GI G +G G KG G RG+ G
Sbjct: 1576 LGILGPSGLPGPKGDKGSRGDWG 1598
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE 157
+QG + PG GP G G G+KG G KG++G+ GAPG G G QG+PG
Sbjct: 1370 GVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPR 1429
Query: 158 GKRGPKGDMGYPGPQGIP---------------GDEGKRGPKGDMGYPGRIGLDGRDGLP 202
G G +G G GP G+P GD G GP G G PG GL G G P
Sbjct: 1430 GVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPP 1489
Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
G G G+PG+ G PGK G G+ G+PG G G KG G G G G+ G+
Sbjct: 1490 GFKGESGLPGQL---GPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGL 1542
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 90/178 (50%), Gaps = 33/178 (18%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDMGYP 169
G +G G G G +G G++G+ G++G PG GP PGP+G G EG +G +G G P
Sbjct: 1355 GDRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAP 1414
Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------------------------- 204
G +G+ G +G GP+G +G G G+ G DGLPG
Sbjct: 1415 GRRGVQGLQGLPGPRGVVGRQGLEGIAGPDGLPGRDGQAGQQGEQGDDGDPGPMGPAGKR 1474
Query: 205 --PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
PG+ G+PG G G G+ GLPG+ G PG GT G G+ GN+G+ G G PG
Sbjct: 1475 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGRTGLP---GNQGEPGSKGQPG 1529
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 94/189 (49%), Gaps = 42/189 (22%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
G GP G KG +G+ GE G+KG++GE+G PGV G PG +G +G +G G+PG +
Sbjct: 832 GYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGV------SGDPGFQGDKGSQGLPGFPGAR 885
Query: 173 GIPGDEGKRGPKG---------------DMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-- 215
G PG GK G KG D+G PG +G +G+ G+PG G+PG G
Sbjct: 886 GKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGD---NGPEGMKGKPGARGLPGPRGQL 942
Query: 216 ----------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
++G PG+ G PG+ G+ G G G+ G GP G +G G G+
Sbjct: 943 GPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIGLV 1002
Query: 260 GTPAICAYK 268
G P I K
Sbjct: 1003 GEPGIVGEK 1011
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 76/144 (52%), Gaps = 12/144 (8%)
Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
QKG+ G G +G+ G PG+ G PGP G KG GYPGP G PG++G
Sbjct: 674 QKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGR---------KGHKGYPGPAGHPGEQG 724
Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
+ GP+G GYPGR GL G G PG G G G G+ G+PG DG G G+PG G
Sbjct: 725 QPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 784
Query: 237 TNGEKGMTGPRGNRGKSGINGVPG 260
G G G G RG G++G PG
Sbjct: 785 KMGMPGFPGVFGERGPPGLDGNPG 808
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 18/167 (10%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
PG G G KG G G G +G+ G +G+PG G PG QG+PG G GPKG GY
Sbjct: 702 PGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLPGPVGDPGPKGSRGYIGL 761
Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---PGLDGIPGRN----------- 214
PG G+PG +G+RG G G G++G+ G G+ GE PGLDG PG
Sbjct: 762 PGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGELGLPGPPGVPGL 821
Query: 215 -GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G+ G G PG G+ G G+ GE G+ G +G +G G++G PG
Sbjct: 822 IGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPG 868
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 83/187 (44%), Gaps = 42/187 (22%)
Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---GKRGPK--------- 163
GP G +G IG G G+ G GE+G PGV G G G+PG G+RGP
Sbjct: 751 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGLDGNPGEL 810
Query: 164 ------------GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLD 208
GD+G GP G PG +G +G G +G PG G G G+P G+PG
Sbjct: 811 GLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQ 870
Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGT---------------NGEKGMTGPRGNRGKS 253
G G G+ G PG G PG G G G+ G G GP G +GK
Sbjct: 871 GDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 930
Query: 254 GINGVPG 260
G G+PG
Sbjct: 931 GARGLPG 937
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 90/240 (37%), Gaps = 82/240 (34%)
Query: 100 QGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVG---------- 146
QG E PGL+G P+G G G +G+ G GE GEKG G++G
Sbjct: 1179 QGLIGQRGE---PGLEGDSGPMGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGV 1235
Query: 147 -----PPGPQGIPGDEGKRGPKGDMGYP---------------------------GPQGI 174
P G G G++G+ G KG GY GP G
Sbjct: 1236 TGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGPPGTPGPKGSRGSLGPTGA 1295
Query: 175 PGDEGKRGPKGDMGYPGRIGL---------------DGRDGLP----------------- 202
PG G +G G GY G G+ G DG
Sbjct: 1296 PGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRG 1355
Query: 203 --GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
GEPG G PG+ G+ G+ GK G G+ G PG G G KG G G +GK G G PG
Sbjct: 1356 DRGEPGDPGYPGQEGVQGLRGKPGQQGQPGHPGPRGWPGPKGSKGAEGPKGKQGKAGAPG 1415
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 68/159 (42%), Gaps = 39/159 (24%)
Query: 112 PGLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
PGL G G KG++G GE G+ G+RGE G G GP GP G+ GD G GP G+ G
Sbjct: 1158 PGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDGEHGE 1217
Query: 169 PGPQGIPGD---------------EGKRGPKGDMGYPGRIGLDGRDGLPGEP-------- 205
G +G+ G+ EGK G +G+ G G G G G GE
Sbjct: 1218 KGQEGLMGEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGYQGQLGEMGVPGDPGP 1277
Query: 206 -------------GLDGIPGRNGMDGIPGKDGLPGKDGI 231
G G PGR G G PG G G GI
Sbjct: 1278 PGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGI 1316
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
+ PPG +G G+ G G +GE G KG+ GE G PG+ G GP+G PGD +G
Sbjct: 1500 QLGPPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQG 1559
Query: 159 KRGPKGDMGYP---GPQGIPGDEGKRGPKGDMGYPGRIGL 195
RGP G MG GP GI G G GPKGD G G GL
Sbjct: 1560 PRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGL 1599
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 30/143 (20%)
Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
+G KG GA GE G+ GE G KG G P G PG++G G +G+ PG
Sbjct: 1146 MGPKGPPGAVGEPGLPGEAGMKGDLG------PLGTPGEQGLIGQRGE---------PGL 1190
Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GI 231
EG GP +G DG G G+PG DG G G +G+ G+DG PG G
Sbjct: 1191 EGDSGP---------MGPDGLKGDRGDPGPDGEHGEKGQEGLMGEDGPPGPPGVTGVRGP 1241
Query: 232 PGTNGTNGEKGMTGPRGNRGKSG 254
G +G GEKG TG +G +G G
Sbjct: 1242 EGKSGKQGEKGRTGAKGAKGYQG 1264
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 68/171 (39%), Gaps = 54/171 (31%)
Query: 144 VVGPPGPQG------------------------------------------IPGDEGKRG 161
++GPPGP+G GD G
Sbjct: 623 LMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSP 682
Query: 162 PKGDMGYPGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGLP---GEPGLDGIPGRNG 215
K G G G+PG G GP KG GYPG G G G P G PG G PGR G
Sbjct: 683 GKAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQG 742
Query: 216 MDGI---PGKDGLPGKDGIP---GTNGTNGEKGMTGPRGNRGKSGINGVPG 260
+ G PG G G G+P G G++GE+G+ G G RGK G+ G PG
Sbjct: 743 LPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPG 793
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 18/105 (17%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKG---------APGVVGPPGPQGIPGDEGKRG 161
PPG GP G KG+ GA+G G +G+ G +G APG+ G PG +G PG G G
Sbjct: 917 PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDG 976
Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG 206
KG+ PGD G+ GP G+ G+ G IGL G G+ GE G
Sbjct: 977 VKGE---------PGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKG 1012
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 53/145 (36%), Gaps = 39/145 (26%)
Query: 158 GKRGPKGD---------------------------------------MGYPGPQGIPGDE 178
G GPKGD G G G+ +
Sbjct: 625 GPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNPGLPGPPGAKGQKGDPGLSPGK 684
Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
G KGDMG PG G G G G G G G G G PG +G PG G PG G
Sbjct: 685 AHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGLP 744
Query: 239 GEKGMTGPRGNRGKSGINGVPGTPA 263
G G GP+G+RG G+ G+ G P
Sbjct: 745 GPVGDPGPKGSRGYIGLPGLFGLPG 769
>sp|Q5QNQ9|CORA1_MOUSE Collagen alpha-1(XXVII) chain OS=Mus musculus GN=Col27a1 PE=2 SV=1
Length = 1845
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 133 KGERGEKGAPGVVGPPGPQGI---PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
+G+RGE G PG G G QG+ PG +G+ G G G PGP+G G+EG +G G G
Sbjct: 1339 RGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGP 1398
Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP---GTNGTNGEKGMTGP 246
GR G G GLPG G+ GR G +G G DG+PG+DG P G G +G+ G GP
Sbjct: 1399 SGRRGTQGLQGLPGP---RGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGP 1455
Query: 247 RGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSE 293
G RG G+ G+PG +K ES LP L PP G+E
Sbjct: 1456 AGRRGNPGVAGLPGAQGPPGFKGESG--LPGQ-----LGPPGKRGTE 1495
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
+G KG GA GE G+ G+ G KG G +GPPG QG+ G G+ G +GD G GP G+ GD
Sbjct: 1131 MGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGD 1190
Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
G GP G+ G G+ GL G DG PG PG+ G+PGR G G G+ G G G G G
Sbjct: 1191 RGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGY 1250
Query: 238 NGE------------------KGMTGPRGNRGKSGINGVPGTPAICAYK 268
GE +G GP G G+ G G PG +K
Sbjct: 1251 LGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHK 1299
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG QG G G G G G KGE G KG PG GP G +G G +G GP+G +G GP
Sbjct: 1363 PGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGP 1422
Query: 172 Q------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
+ GIPG +G+ G +GD G G G G G G PG+ G+PG G G G+ GL
Sbjct: 1423 EGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGL 1482
Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQLLI 285
PG+ G PG GT G G+ GN+G+ G G PG + + P +
Sbjct: 1483 PGQLGPPGKRGTEGGTGLP---GNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGF 1539
Query: 286 --------PPTIVGSEHIFS 297
PP ++G E I
Sbjct: 1540 KGIQGPRGPPGLMGKEGIIG 1559
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 82/158 (51%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
P G GP G KGE G KG+ G G G +G G+ G PGP+G+ G +G G G G PG
Sbjct: 1374 PRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPG 1433
Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 230
G PG +G +G GD G G G G G+ G PG G PG G G+PG+ G PGK G
Sbjct: 1434 RDGRPGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRG 1493
Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G G G +G G +G G SG G PG + K
Sbjct: 1494 TEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPK 1531
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 90/170 (52%), Gaps = 24/170 (14%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--- 168
PG G G KG GA G G +G+ G +G+PG G PG QG PG G GPKG GY
Sbjct: 687 PGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGL 746
Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPGK 222
PG G+PG +G+R G G PG+ G GR G PG+ PGLDG PG G+ G PG
Sbjct: 747 PGLFGLPGSDGER---GLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 803
Query: 223 DGL------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
GL PG G+ G G GE G+ G +G +G G++G PG
Sbjct: 804 LGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPG 853
Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
G+ G+ G G+ GV+G RGE G G G PGP+G PG +G +G +G G PG G
Sbjct: 1343 GEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAG---PS 1399
Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------------- 219
G+RG +G G PG G+ GR G G G DGIPGR+G G
Sbjct: 1400 GRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQGNDGDPGPVGPAGRR 1459
Query: 220 --PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
PG GLPG G PG G +G G GP G RG G G+PG
Sbjct: 1460 GNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPG 1502
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 76/143 (53%), Gaps = 12/143 (8%)
Query: 125 GAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
GAKG MG+ G +G KG PG G PG QG PG EG G K GYPG QG P
Sbjct: 673 GAKGNMGLPGLSGNPGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAK---GYPGRQGFP 729
Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
G G GPKG GY G GL G G GE GL G+PG+ G G PG G G+ G PG +
Sbjct: 730 GPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLD 789
Query: 236 GTNGEKGMTGPRGNRGKSGINGV 258
G GE G+ GP G G G G
Sbjct: 790 GNPGEIGLPGPPGVLGLIGDTGA 812
Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIPGD---EGKRGPKGD 165
PG QG G G+ G G G +G G G PG GPPG G+PG GKRG +G
Sbjct: 1438 PGYQGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGG 1497
Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
G PG QG PG +G+ G G+MG+PG GL G G PG+ G GI G G G+ GK+G+
Sbjct: 1498 TGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGI 1557
Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRG 251
G G+ G +G G KG G RG+ G
Sbjct: 1558 IGPPGMLGPSGLPGPKGDRGSRGDLG 1583
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 89/178 (50%), Gaps = 30/178 (16%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ------GIPGDEGKRGPKGDM 166
G +GP G+ G+ G G G +G +G G GVVG GP+ GIPG +G+ G +GD
Sbjct: 1385 GEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGYQGDQ 1444
Query: 167 ---------------------GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP--- 202
G PG QG PG +G+ G G +G PG+ G +G GLP
Sbjct: 1445 GNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQ 1504
Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
GEPG G PG +G G PG GL G G PG G G +G GP G GK GI G PG
Sbjct: 1505 GEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPG 1562
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 94/192 (48%), Gaps = 24/192 (12%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
G T P G GP G KG +G GE G+KG++GE+G PGV G PG QG G G
Sbjct: 805 GLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLP 864
Query: 161 GPKGDMGYPGPQGIPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
G G G PGP G GD+G G GD+G PG G +G G PG GL G P
Sbjct: 865 GLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPP 924
Query: 212 GRNG---------------MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
G+ G ++G PG+ G PG+ G+ G+ G G+ G GP G +G G
Sbjct: 925 GQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFI 984
Query: 257 GVPGTPAICAYK 268
G+ G P I K
Sbjct: 985 GLVGEPGIVGEK 996
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 85/173 (49%), Gaps = 33/173 (19%)
Query: 112 PGLQGPIGQKGEIGAKGEM------------GVKGERGE---------------KGAPGV 144
PG QG G++G GAKG + G+ GE G KG PG
Sbjct: 1080 PGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGA 1139
Query: 145 VGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
VG PG +PGD G +G G +G PG QG+ G G+ G +GD G +G DG G G+
Sbjct: 1140 VGEPG---LPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGP---VGPDGLKGDRGD 1193
Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
PG DG G G +G+ G+DG PG GI G G G+ G G +G RG G G
Sbjct: 1194 PGPDGEHGEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKG 1246
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 81/166 (48%), Gaps = 18/166 (10%)
Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
QKG+ G G +G G PG+ G PGP G KG G+PG G PG++G
Sbjct: 659 QKGDPGLSPGQAHDGAKGNMGLPGLSGNPGPLGR---------KGHKGHPGAAGHPGEQG 709
Query: 180 KRGPKGD---MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 236
+ GP+G GYPGR G G G PG G G G G+ G+PG DG G G+PG G
Sbjct: 710 QPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRG 769
Query: 237 TNGEKGMTGPRGNRGKSGIN------GVPGTPAICAYKRESCSLLP 276
G G G G RG G++ G+PG P + ++ +L P
Sbjct: 770 EMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGP 815
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 85/190 (44%), Gaps = 42/190 (22%)
Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQG---IPGDEGKRGPKG------DM 166
GP G +G IG G G+ G GE+G PGV G G G PGD G+RGP G ++
Sbjct: 736 GPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEI 795
Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
G PGP G+ G G G G +GYPG G+ G G GEPGL G G G+ G+ G G
Sbjct: 796 GLPGPPGVLGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQ 855
Query: 227 GKDGI------------PGTNGTNGEKGM---------------------TGPRGNRGKS 253
G G PG G G+KG GP G +GK
Sbjct: 856 GDKGSHGLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGKP 915
Query: 254 GINGVPGTPA 263
G G+PG P
Sbjct: 916 GARGLPGPPG 925
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 94/255 (36%), Gaps = 82/255 (32%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
L+ +G ++ P G G G +G+ G GE G KG+ G KG G GPPG G+PG
Sbjct: 1166 LIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPGITGVPG 1225
Query: 156 DEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKGDMGYPGRIG 194
EGK G +G+ G G +G G +G RG G G PGR+G
Sbjct: 1226 REGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTGAPGRMG 1285
Query: 195 LDGRDGL----------------------------------------------------P 202
G GL P
Sbjct: 1286 AQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEP 1345
Query: 203 GEPG---------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
G+PG L G PG+ G G PG G PG G G G G+ G GP G RG
Sbjct: 1346 GDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGPSGRRGTQ 1405
Query: 254 GINGVPGTPAICAYK 268
G+ G+PG + +
Sbjct: 1406 GLQGLPGPRGVVGRQ 1420
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 84/187 (44%), Gaps = 36/187 (19%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG-- 170
GL G G KG G +G G GE+G KG G VGP G G PG +G G +G G G
Sbjct: 1039 GLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFL 1098
Query: 171 ----------PQGIPGDEG------------KRGPKGDMGYPGRIGLDGRDGL------- 201
+G+PG+ G + GPKG G G GL G G+
Sbjct: 1099 GIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPL 1158
Query: 202 --PGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
PGE GL G PG G G G DGL G G PG +G +GEKG G +G G G
Sbjct: 1159 GPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPP 1218
Query: 257 GVPGTPA 263
G+ G P
Sbjct: 1219 GITGVPG 1225
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 92/235 (39%), Gaps = 85/235 (36%)
Query: 111 PPGLQGPIGQKGEIGAK---------------------GEMGVKGERGEKGAPGVVGPPG 149
PPG QG IGQ+GE G + GE G KG+ G KG G GPPG
Sbjct: 1160 PPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPGPPG 1219
Query: 150 PQGIPGDEGKRGPKGDMGYPGPQGIPGDEG---------------------KRGPKGDMG 188
G+PG EGK G +G+ G G +G G +G RG G G
Sbjct: 1220 ITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEPGPPGTPGPKGSRGTLGPTG 1279
Query: 189 YPGRIGLDGRDGLPGEPGLDGI------------PGRNGMDGI----------------- 219
PGR+G G GL G G GI G G DG
Sbjct: 1280 APGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGEDGKTEGPPGPPGDRGPVGDR 1339
Query: 220 -----PGKDGLPGKDGIPGTNGTNGE---------KGMTGPRGNRGKSGINGVPG 260
PG G PG++G+ G G G+ +G GP+G++G+ G G PG
Sbjct: 1340 GDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPG 1394
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 85/181 (46%), Gaps = 30/181 (16%)
Query: 126 AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKG 185
++G G++G +G +G G GP G QG G +G+ GP+G G PG QG G+ G G KG
Sbjct: 1037 SRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKG 1096
Query: 186 DMGYPGRIGLDGRDGLPGEPGLD------------------------GIPGRNGMD---- 217
+G PG G G GLPGEPG G+PG +GM
Sbjct: 1097 FLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLG 1156
Query: 218 --GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLL 275
G PG+ GL G+ G PG G +G G G +G+RG G +G G K E S
Sbjct: 1157 PLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEDGSPG 1216
Query: 276 P 276
P
Sbjct: 1217 P 1217
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 78/189 (41%), Gaps = 51/189 (26%)
Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDE---------------GKRGPKGDMG 167
+IG G+ G +G +G+ GA G+ GPPG G GDE G++G G G
Sbjct: 899 DIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPG 958
Query: 168 YPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI----------------- 210
G +G PGD G+ GP G+ G G IGL G G+ GE G G+
Sbjct: 959 LDGSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPG 1018
Query: 211 -------------------PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRG 251
G GM G G G G DG G G+ G KG GPRG G
Sbjct: 1019 TPGGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPG 1078
Query: 252 KSGINGVPG 260
+ G G G
Sbjct: 1079 QPGQQGAAG 1087
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 53/100 (53%), Gaps = 18/100 (18%)
Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGD------EG 158
+ PPG +G G G G +GE G KG+ GE G PGV G GP+G PGD +G
Sbjct: 1485 QLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQG 1544
Query: 159 KRGPKGDMGYP---------GPQGIPGDEGKRGPKGDMGY 189
RGP G MG GP G+PG +G RG +GD+G
Sbjct: 1545 PRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDLGL 1584
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 90/231 (38%), Gaps = 63/231 (27%)
Query: 94 IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
I L + G S E PG+ G G+ G G G+ G +G G G PG +G PGP G+
Sbjct: 744 IGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGV 803
Query: 154 PGDEGKRGPKGDMGYPGPQGIPG---DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD-- 208
G G G G +GYPGP+G+ G G+ G KGD G G G+ G G G+ G
Sbjct: 804 LGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGL 863
Query: 209 -------------------------------------GIPGRNGMDGIPGKDGLPGKDGI 231
G PG NG +G+ GK PG G+
Sbjct: 864 PGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDIGPPGDNGPEGMKGK---PGARGL 920
Query: 232 PGTNGTNGEKGMTGPRGN------------RGKSGINGVPGTPAICAYKRE 270
PG G GP G+ G+ G G PG P + K E
Sbjct: 921 PGP------PGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGE 965
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 83/196 (42%), Gaps = 51/196 (26%)
Query: 111 PPGLQGPIGQKGEIGAKGEMG---------------------VKGERGEKGAPGVVGPPG 149
PPG GP G KG+ GA+G G ++G+ G KG PG G G
Sbjct: 902 PPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDG 961
Query: 150 PQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD---------------MGYPGRIG 194
+G PGD G+ GP G+ G G G+ G+ G G KGD MG+PG G
Sbjct: 962 SKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPG 1021
Query: 195 ------------LDGRDGLPGEPGLDGIPGRNGMDGIPGKDG---LPGKDGIPGTNGTNG 239
G GLPG G G G G DG G+ G L G+ G G G G
Sbjct: 1022 GIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPG 1081
Query: 240 EKGMTGPRGNRGKSGI 255
++G G RG+ G G
Sbjct: 1082 QQGAAGERGHSGAKGF 1097
>sp|Q04857|CO6A1_MOUSE Collagen alpha-1(VI) chain OS=Mus musculus GN=Col6a1 PE=2 SV=1
Length = 1025
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 66/121 (54%)
Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
GE+G PG+ G G G PG G GP G G G +G G++G RGPKG G G+ G+D
Sbjct: 268 GERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGID 327
Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
G DG+ GE G G+PG G G G G PG G G G GEKG G G G+ G +
Sbjct: 328 GVDGMKGETGYPGLPGCKGSPGFDGIQGPPGPKGDAGAFGMKGEKGEAGADGEAGRPGNS 387
Query: 257 G 257
G
Sbjct: 388 G 388
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 85/205 (41%), Gaps = 64/205 (31%)
Query: 113 GLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGP---------------------- 147
G+QGP G KG+ GA KGE G G GE G PG G
Sbjct: 352 GIQGPPGPKGDAGAFGMKGEKGEAGADGEAGRPGNSGSPGDEGDPGEPGPPGEKGEAGDE 411
Query: 148 -----------------------PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK 184
PG +G GD G+ GP+GD G GP GIPGD G+ GP
Sbjct: 412 GNAGPDGAPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPVGIPGDSGEAGPI 471
Query: 185 GDMGYPGRIGLDGRDGLP---------------GEPGLDGIPGRNGMDGIPGKDGLPGKD 229
G GY G G G +GL GE G DG PG NG +G PG G PG
Sbjct: 472 GPKGYRGDEGPPGPEGLRGAPGPVGPPGDPGLMGERGEDGPPG-NGTEGFPGFPGYPGNR 530
Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSG 254
G PG NGT G G+ G G G G
Sbjct: 531 GPPGLNGTKGYPGLKGDEGEVGDPG 555
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 84/190 (44%), Gaps = 30/190 (15%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
G E PG G +G G G KGE G +GE+G +G G G G +GI G +G +
Sbjct: 274 GLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMK 333
Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG----- 215
G G G PG +G PG +G +GP G G G G+ G G G G G PG +G
Sbjct: 334 GETGYPGLPGCKGSPGFDGIQGPPGPKGDAGAFGMKGEKGEAGADGEAGRPGNSGSPGDE 393
Query: 216 ----------MDGIPGKDGLPGKDGI---------------PGTNGTNGEKGMTGPRGNR 250
G G +G G DG PG G G+ G GP+G++
Sbjct: 394 GDPGEPGPPGEKGEAGDEGNAGPDGAPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQ 453
Query: 251 GKSGINGVPG 260
G+ G G+PG
Sbjct: 454 GREGPVGIPG 463
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------PGDEGKRGPKGD 165
PG++GP G GE G +G+ G +G G G G GP GP+G PG EG RG G
Sbjct: 435 PGVRGPRGDPGEAGPQGDQGREGPVGIPGDSGEAGPIGPKGYRGDEGPPGPEGLRGAPGP 494
Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
+G PG G+ G+ G+ GP G+ G +G G PG PG G PG NG G PG G
Sbjct: 495 VGPPGDPGLMGERGEDGPPGN-------GTEGFPGFPGYPGNRGPPGLNGTKGYPGLKGD 547
Query: 226 PGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
G+ G PG + + PRG +G G
Sbjct: 548 EGEVGDPGEDNND-----ISPRGVKGAKG 571
>sp|Q6P4Z2|CO2A1_XENTR Collagen alpha-1(II) chain OS=Xenopus tropicalis GN=col2a1 PE=2
SV=1
Length = 1492
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 86/145 (59%), Gaps = 12/145 (8%)
Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP---GDEGKRGPKGDMGYPGPQ 172
GP+G KG+ G G G KGE G KG +G GPQG P G+EGKRG +G+ G GP
Sbjct: 452 GPLGPKGQTGDPGVAGFKGEHGPKG---EIGSAGPQGAPGPAGEEGKRGARGEPGAAGPL 508
Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
G PG+ RG G+ G+PG+ GL G G PGE G+ G+ G G +G PG+ PG+ G+P
Sbjct: 509 GPPGE---RGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGANGDPGR---PGEPGLP 562
Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
G G G G GP+G G SG +G
Sbjct: 563 GARGLTGRPGDAGPQGKVGPSGASG 587
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 88/171 (51%), Gaps = 21/171 (12%)
Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRG 161
E+ P G G G +G G GE G +G RGE GA G +GPPG +G PG+ +G G
Sbjct: 471 EHGPKGEIGSAGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAG 530
Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
PK G PG +G+PG G +G GD G PG GL G GL G PG G G+ G G G
Sbjct: 531 PK---GAPGERGVPGLGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASG 587
Query: 222 KDGL------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
+DG PG G PG G NGE G G +G G G+ G+PG
Sbjct: 588 EDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLLGAPGLRGLPG 638
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 91/193 (47%), Gaps = 36/193 (18%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
PG G G+ G GA+G G +G RGE G PG GP G G PG +G G KG G PG
Sbjct: 373 PGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGASGNPGTDGIPGAKGSSGAPGI 432
Query: 171 -----------------------PQGIPGD------EGKRGPKGDM------GYPGRIGL 195
P+G GD +G+ GPKG++ G PG G
Sbjct: 433 AGAPGFPGPRGPPGPQGATGPLGPKGQTGDPGVAGFKGEHGPKGEIGSAGPQGAPGPAGE 492
Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
+G+ G GEPG G G G G PG G PG+DG+ G G GE+G+ G G +G +G
Sbjct: 493 EGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPGLGGPKGANGD 552
Query: 256 NGVPGTPAICAYK 268
G PG P + +
Sbjct: 553 PGRPGEPGLPGAR 565
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 85/175 (48%), Gaps = 30/175 (17%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-------- 164
G G G+KG +GA G G+ G+ GE GA G GP GP G G++G GP G
Sbjct: 617 GEPGKAGEKGLLGAPGLRGLPGKDGETGAQGPNGPAGPAGERGEQGPPGPSGFQGLPGPP 676
Query: 165 ----------DMGYPGPQGIPGDEGKRGPKGDMGYPGR------IGLDGRDGLPGEPGLD 208
D G PG G PG GP+G+ G+PG GL G GLPG PG D
Sbjct: 677 GSPGEGGKPGDQGVPGEAGAPG---LVGPRGERGFPGERGSSGPQGLQGPRGLPGTPGTD 733
Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G G G G G G PG G+PG G G++GP+G+RG +G G G P
Sbjct: 734 GPKGATGPSGPNGAQGPPGLQGMPGERGA---AGISGPKGDRGDTGEKGPEGAPG 785
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 100 QGFCNSTKEYCPPGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
+GF P GLQGP G G G KG G G G +G PG+ G PG +G G
Sbjct: 706 RGFPGERGSSGPQGLQGPRGLPGTPGTDGPKGATGPSGPNGAQGPPGLQGMPGERGAAGI 765
Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRG---------------PKGDMGYPGRIGLDGRDGL 201
G +G +GD G GP+G PG +G RG KG+ G G G+ G G
Sbjct: 766 SGPKGDRGDTGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGEKGESGPSGPAGIVGARGA 825
Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
PG+ G G PG G G PG DG G G G +G G+ G GP+G G G G
Sbjct: 826 PGDRGETGPPGPAGFAGPPGADGQAGLKGDQGESGQKGDAGAPGPQGPSGAPGPQG 881
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 83/170 (48%), Gaps = 27/170 (15%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
PG GP+G GE GA G G G+ G KGAPG +G+PG G +G GD G
Sbjct: 502 PGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGE------RGVPGLGGPKGANGDPGR 555
Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG------------LPGEPGLDGIPGRNGM 216
PG G+PG G G GD G G++G G G G+PG+ G PG G
Sbjct: 556 PGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPGVMGFPGPKGA 615
Query: 217 DGIPGKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
+G PGK G PG G+PG +G G +G GP G G+ G G PG
Sbjct: 616 NGEPGKAGEKGLLGAPGLRGLPGKDGETGAQGPNGPAGPAGERGEQGPPG 665
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 106/249 (42%), Gaps = 58/249 (23%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI---PGD---EGKRGPKGD- 165
GL GP G GE G G G KG G+ G PG G PG +G+ PGD +GK GP G
Sbjct: 527 GLAGPKGAPGERGVPGLGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAS 586
Query: 166 --------------------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEP 205
MG+PGP+G G+ GK G KG +G PG GL G+DG G
Sbjct: 587 GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLLGAPGLRGLPGKDGETGAQ 646
Query: 206 GLDGIPG---RNGMDGIPGKDG---------------------LPGKDGIPGTNGTNGEK 241
G +G G G G PG G +PG+ G PG G GE+
Sbjct: 647 GPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGER 706
Query: 242 GMTGPRGNRGKSGIN---GVPGTPAICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSS 298
G G RG+ G G+ G+PGTP K + PN PP + G +
Sbjct: 707 GFPGERGSSGPQGLQGPRGLPGTPGTDGPKGATGPSGPNGAQG----PPGLQGMPGERGA 762
Query: 299 SPIVVREGD 307
+ I +GD
Sbjct: 763 AGISGPKGD 771
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGDEG 158
PPGLQG G++G G G G +G+ GEKG G G G +G+ G++G
Sbjct: 750 PPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGAPGKDGSRGLTGPIGPPGPSGPNGEKG 809
Query: 159 KRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
+ GP G G G +G PGD G+ GP G G+ G G DG+ GL G+ G G G G G
Sbjct: 810 ESGPSGPAGIVGARGAPGDRGETGPPGPAGFAGPPGADGQAGLKGDQGESGQKGDAGAPG 869
Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
G G PG G G NG G +G GP G G G G
Sbjct: 870 PQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAG 908
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 90/198 (45%), Gaps = 48/198 (24%)
Query: 96 LVAMQGFCNSTKEYCPPG---LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PG 149
+V +G E PPG GP G G+ G KG+ G G++G+ GAPG GP PG
Sbjct: 819 IVGARGAPGDRGETGPPGPAGFAGPPGADGQAGLKGDQGESGQKGDAGAPGPQGPSGAPG 878
Query: 150 PQ------GIPGDEGKRGPKGDMGYPGPQG---------------IPGDEGKRGPK---G 185
PQ G G G +GP G G+PG G PG GK GPK G
Sbjct: 879 PQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPSGAPGSAGKEGPKGARG 938
Query: 186 DMGYPGRI---GLDGRDGLPGEPGLDG---------------IPGRNGMDGIPGKDGLPG 227
D G GR GL G G+PGE G G + G+ G+ G+PG+ G G
Sbjct: 939 DAGPTGRAGDPGLQGPAGVPGEKGESGEDGPSGPDGPPGPQGLSGQRGIVGLPGQRGERG 998
Query: 228 KDGIPGTNGTNGEKGMTG 245
G+PG +G G++G G
Sbjct: 999 FPGLPGPSGEPGKQGGPG 1016
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 87/195 (44%), Gaps = 57/195 (29%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGE---RGEKGAPG---------VVGP---PGPQGIPG 155
P G GP G++G+ GA+GE G G GE+GAPG + GP PG +G+PG
Sbjct: 483 PQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVPG 542
Query: 156 DEGKRGPKGDMGYPGPQGIPGD------------EGKRGPKGD----------------- 186
G +G GD G PG G+PG +GK GP G
Sbjct: 543 LGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARG 602
Query: 187 ----MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
MG+PG G +G G GE GL G PG GLPGKDG G G NG G
Sbjct: 603 QPGVMGFPGPKGANGEPGKAGEKGLLGAPGLR---------GLPGKDGETGAQGPNGPAG 653
Query: 243 MTGPRGNRGKSGING 257
G RG +G G +G
Sbjct: 654 PAGERGEQGPPGPSG 668
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 87/220 (39%), Gaps = 54/220 (24%)
Query: 89 NAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPP 148
A + L QG + PG QGP G G G G G KG RG +G PG G P
Sbjct: 845 GADGQAGLKGDQGESGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFP 904
Query: 149 GPQG---------------IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
G G PG GK GPKG G GP G GD G +GP G PG
Sbjct: 905 GAAGRVGPPGPNGNPGPSGAPGSAGKEGPKGARGDAGPTGRAGDPGLQGP---AGVPGEK 961
Query: 194 GLDGRD------------GLPGEPGLDGIPGR---NGMDGIPGKDGLPGKDGIPGTN--- 235
G G D GL G+ G+ G+PG+ G G+PG G PGK G PG+
Sbjct: 962 GESGEDGPSGPDGPPGPQGLSGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGGPGSAGDR 1021
Query: 236 ------------------GTNGEKGMTGPRGNRGKSGING 257
G G G GP G G +GI G
Sbjct: 1022 GPPGPVGPPGLTGPAGEPGREGNAGSDGPPGRDGATGIKG 1061
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 94/236 (39%), Gaps = 69/236 (29%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVK------------------GERG 137
L + G T P G GP G++GE G G G + G G
Sbjct: 633 LRGLPGKDGETGAQGPNGPAGPAGERGEQGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPG 692
Query: 138 EKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDG 197
E GAPG+VGP G +G PG+ G GP+G GP+G+PG G GPKG G G
Sbjct: 693 EAGAPGLVGPRGERGFPGERGSSGPQG---LQGPRGLPGTPGTDGPKG------ATGPSG 743
Query: 198 RDGLPGEPGLDGIPGRNGMDGIPGK------------DGLPGKDG--------------- 230
+G G PGL G+PG G GI G +G PGKDG
Sbjct: 744 PNGAQGPPGLQGMPGERGAAGISGPKGDRGDTGEKGPEGAPGKDGSRGLTGPIGPPGPSG 803
Query: 231 ---------------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
I G G G++G TGP G G +G G G + + ES
Sbjct: 804 PNGEKGESGPSGPAGIVGARGAPGDRGETGPPGPAGFAGPPGADGQAGLKGDQGES 859
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 74/167 (44%), Gaps = 24/167 (14%)
Query: 120 QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEG 179
+KGE G G G+ G RG G G GPPGP G GP G G G+ GD+G
Sbjct: 807 EKGESGPSGPAGIVGARGAPGDRGETGPPGPAGF------AGPPGADGQ---AGLKGDQG 857
Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG--------- 230
+ G KGD G PG G G G G G++G G G G PG G PG G
Sbjct: 858 ESGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNG 917
Query: 231 ------IPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
PG+ G G KG G G G++G G+ G + K ES
Sbjct: 918 NPGPSGAPGSAGKEGPKGARGDAGPTGRAGDPGLQGPAGVPGEKGES 964
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 93/226 (41%), Gaps = 63/226 (27%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGE---------------------MGVKGER 136
+G T PGLQGP G GE G GE +G+ G+R
Sbjct: 935 GARGDAGPTGRAGDPGLQGPAGVPGEKGESGEDGPSGPDGPPGPQGLSGQRGIVGLPGQR 994
Query: 137 GEKGAPGVVGP---PGPQGIPGD------------------EGKRGPKGDMGYPGPQGIP 175
GE+G PG+ GP PG QG PG G+ G +G+ G GP P
Sbjct: 995 GERGFPGLPGPSGEPGKQGGPGSAGDRGPPGPVGPPGLTGPAGEPGREGNAGSDGP---P 1051
Query: 176 GDEGKRGPKGDMG---------------YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
G +G G KGD G PG +G G+ G GE G G G +G G
Sbjct: 1052 GRDGATGIKGDRGETGPLGAPGAPGAPGAPGPVGPTGKQGDRGESGPQGPLGPSGPAGA- 1110
Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
GLPG G G G GE G G +G+RG +G+ G+PG P
Sbjct: 1111 --RGLPGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGTAG 1154
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 53/124 (42%), Gaps = 22/124 (17%)
Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
G G GP G G EG +GP+G+ G PG G G G PG DGIPG G G PG
Sbjct: 377 GSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAS---GNPGTDGIPGAKGSSGAPGIA 433
Query: 222 ----------------KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
G G G G G G KG GP+G G +G G PG PA
Sbjct: 434 GAPGFPGPRGPPGPQGATGPLGPKGQTGDPGVAGFKGEHGPKGEIGSAGPQGAPG-PAGE 492
Query: 266 AYKR 269
KR
Sbjct: 493 EGKR 496
>sp|Q9WUB9|MARCO_MESAU Macrophage receptor MARCO OS=Mesocricetus auratus GN=MARCO PE=2
SV=1
Length = 483
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 91/179 (50%), Gaps = 30/179 (16%)
Query: 112 PGLQGPIGQKGEIGAKGEMGV------------KGERGEKGAPGVVGPPGPQGIPGDEGK 159
PGLQGP G KGE G +G MG +GE+G KG G++GP G G GD+G
Sbjct: 157 PGLQGPPGIKGEAGLQGPMGAPREPGATGAPGPQGEKGSKGDKGLIGPKGEHGTKGDKGD 216
Query: 160 R---GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GEPGLDGIPGR 213
G KGDMG G G+ G G +G KGD G PG GL G G+ G+PGL G+PG
Sbjct: 217 LGLPGSKGDMGMKGVTGVMGPPGAQGNKGDPGKPGLPGLAGSPGVKGDQGQPGLQGVPGT 276
Query: 214 NGMDGIPGKDGLPGK------------DGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G G G PG G PG G G KG TG +G +G G +GVPG
Sbjct: 277 PGAAGPSGAKGEPGHPGPPGPTGPQGISGSPGAAGLKGSKGDTGIQGQKGTKGESGVPG 335
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 120/278 (43%), Gaps = 76/278 (27%)
Query: 52 VPQTPHVEFVPPDLYEEIREREK--EQQNSTHNNPWVWLNAYSR----IPLV-------- 97
VP+TP ++ + L + +E+ +Q ++ NP ++ R IP +
Sbjct: 108 VPRTPGLQALQVQLTQVRTSQEQLLQQVDNLTRNPELFRIKGERGSPGIPGLQGPPGIKG 167
Query: 98 --AMQGFCNSTKEYCPPGLQGPIGQKGE------IGAKGEMGVKGERGEKGAP------- 142
+QG + +E G GP G+KG IG KGE G KG++G+ G P
Sbjct: 168 EAGLQGPMGAPREPGATGAPGPQGEKGSKGDKGLIGPKGEHGTKGDKGDLGLPGSKGDMG 227
Query: 143 -----GVVGPPGPQ---------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP----- 183
GV+GPPG Q G+PG G G KGD G PG QG+PG G GP
Sbjct: 228 MKGVTGVMGPPGAQGNKGDPGKPGLPGLAGSPGVKGDQGQPGLQGVPGTPGAAGPSGAKG 287
Query: 184 ----------------------------KGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
KGD G G+ G G G+PG G G G G
Sbjct: 288 EPGHPGPPGPTGPQGISGSPGAAGLKGSKGDTGIQGQKGTKGESGVPGLAGRKGDTGNPG 347
Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
+ G G+ G PG G PG G++G++G G +G +G+S
Sbjct: 348 LAGPKGEPGRPGLKGDPGMKGSSGQQGQKGEKGEKGQS 385
Score = 40.4 bits (93), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIP---GTNGTNGEKGMTGPRG 248
+ G G PG PGL G PG G G+ G G PG G P G G+ G+KG+ GP+G
Sbjct: 147 IKGERGSPGIPGLQGPPGIKGEAGLQGPMGAPREPGATGAPGPQGEKGSKGDKGLIGPKG 206
Query: 249 NRGKSGINGVPGTPA 263
G G G G P
Sbjct: 207 EHGTKGDKGDLGLPG 221
>sp|C7DZK3|CRA1A_DANRE Collagen alpha-1(XXVII) chain A OS=Danio rerio GN=col27a1a PE=2 SV=1
Length = 1783
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 93/192 (48%), Gaps = 39/192 (20%)
Query: 112 PGLQGPIGQKGEIGAKG------EMGVKGERGEKGAPGVVGPPGPQ-------------- 151
PGL+GP+G++G+ G G + GV G RG+ GAPG+ G PGP+
Sbjct: 1274 PGLRGPVGKRGDRGEPGDPGYVGQQGVDGLRGKPGAPGLPGDPGPRGTQGPKGSKGEQGQ 1333
Query: 152 -------------------GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGR 192
G+PG G G +G G+PG G+ G +G RG GD G G
Sbjct: 1334 KGKQGQQGERGSRGSPGVVGLPGPRGTVGREGREGFPGTDGLAGKDGSRGTPGDQGDDGE 1393
Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
GL G+ G PG+ G+ G+PG G G G+ GLPG G G G G G+ GP+G+RG
Sbjct: 1394 FGLPGKPGAPGKVGVIGLPGPQGSFGPKGERGLPGHPGPSGKRGFKGGMGLPGPQGDRGS 1453
Query: 253 SGINGVPGTPAI 264
G G G P
Sbjct: 1454 KGQPGDIGEPGF 1465
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
Query: 115 QGPIGQKGEIGAKGEMGVK---GERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
QGP+G+ G G G G+ G G KGA G +G PG G+PG +G+R GP G G
Sbjct: 655 QGPVGEAGAKGYPGRQGLPGPIGPVGPKGARGFIGIPGLFGLPGADGERGSPGPPGKRGK 714
Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------PGEPGLDGIPGRNGMDGIPGK 222
G G PGD G+RGP G G PG IG G G+ G G G+PG NG+ G+PG
Sbjct: 715 MGRPGFPGDFGERGPPGLDGEPGVIGAPGPPGVLGLIGDMGPAGTVGVPGLNGLKGVPGN 774
Query: 223 DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G G G G GE+G G +G++G G+ G+PG
Sbjct: 775 MGESGLKGDKGDVGLPGEQGEIGFQGDKGVQGLPGLPG 812
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 87/187 (46%), Gaps = 27/187 (14%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMG---VKGERGEKGAPGVVGPPGPQGIP 154
+GF + PG G G G G +G+MG G+ GE+G PG+ G PG G P
Sbjct: 683 GARGFIGIPGLFGLPGADGERGSPGPPGKRGKMGRPGFPGDFGERGPPGLDGEPGVIGAP 742
Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
G G G GDMG G G+PG G +G G+MG G G G GLPGE G G G
Sbjct: 743 GPPGVLGLIGDMGPAGTVGVPGLNGLKGVPGNMGESGLKGDKGDVGLPGEQGEIGFQGDK 802
Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGE---------------------KGMTGPRGNRGKS 253
G+ G+PG LPG G PG G GE G+ GP G +GK
Sbjct: 803 GVQGLPG---LPGPRGKPGPQGKTGEIGPSGLPGPPGPEGFPGDIGKPGLNGPEGPKGKP 859
Query: 254 GINGVPG 260
G G+PG
Sbjct: 860 GARGLPG 866
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 83/156 (53%), Gaps = 15/156 (9%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI------------PGDEGKR 160
G G G G+ G GE G+ G+ G G GV+G PGPQG PG GKR
Sbjct: 1377 GKDGSRGTPGDQGDDGEFGLPGKPGAPGKVGVIGLPGPQGSFGPKGERGLPGHPGPSGKR 1436
Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
G KG MG PGPQG G +G+ G G+ G+PG +G+ G G PG+ G GI G G G
Sbjct: 1437 GFKGGMGLPGPQGDRGSKGQPGDIGEPGFPGMLGMFGPKGPPGDFGPKGIQGPKGPQGNM 1496
Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN 256
G+ GL G G+ G G G +G T GN+G+ G+
Sbjct: 1497 GRGGLAGPVGVIGPIGNPGSRGDT---GNKGELGVQ 1529
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKG---------ERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
GL GPIG G GA+G +G+ G ERG G PG G G G PGD G+RGP
Sbjct: 671 GLPGPIGPVGPKGARGFIGIPGLFGLPGADGERGSPGPPGKRGKMGRPGFPGDFGERGPP 730
Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD 223
G G PG G PG G G GDMG G +G+ G +GL G PG G +G+ G G
Sbjct: 731 GLDGEPGVIGAPGPPGVLGLIGDMGPAGTVGVPGLNGLKGVPGNM---GESGLKGDKGDV 787
Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
GLPG+ G G G G +G+ G G RGK G G
Sbjct: 788 GLPGEQGEIGFQGDKGVQGLPGLPGPRGKPGPQG 821
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 79/172 (45%), Gaps = 33/172 (19%)
Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK--------------------- 163
G KG+ G+ + KG G VG PGP G+ G EG++G K
Sbjct: 602 GKKGDPGLSPGKAPKGDKGDVGLPGPVGLVGVEGRKGQKGHPGPPGLPGEPGEQGPVGEA 661
Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPG---------LDGIP 211
G GYPG QG+PG G GPKG G+ PG GL G DG G PG G P
Sbjct: 662 GAKGYPGRQGLPGPIGPVGPKGARGFIGIPGLFGLPGADGERGSPGPPGKRGKMGRPGFP 721
Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G G G PG DG PG G PG G G G GP G G G+NG+ G P
Sbjct: 722 GDFGERGPPGLDGEPGVIGAPGPPGVLGLIGDMGPAGTVGVPGLNGLKGVPG 773
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGE---------------RGEKGAPGVVGPPGPQGIPGD 156
PG +GP G+ G+ G GE G KG RGE G G GP GP
Sbjct: 1075 PGPKGPAGKVGDSGLPGEPGEKGSIGLAGNAGAAGLIGARGEPGLEGEAGPAGP------ 1128
Query: 157 EGKRGPKGDMGYPGPQGI---PGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
+G +G KGDMG G QG+ PG +GK GP GD G G G +G+ G GE G G+ G
Sbjct: 1129 DGTKGEKGDMGTEGEQGVRGDPGIKGKDGPPGDPGLTGVRGPEGKSGKSGERGKPGLKGA 1188
Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G G G+ G GK G GT G G +G G G G+ G+ G PG +K
Sbjct: 1189 KGNIGHLGETGSVGKIGPIGTTGPKGSRGTIGHAGAPGRMGLQGDPGISGYEGHK 1243
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 78/157 (49%), Gaps = 27/157 (17%)
Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
G G G +G +G +G+RGE G PG VG QG+ G GK PG G+PGD
Sbjct: 1269 GPTGAPGLRGPVGKRGDRGEPGDPGYVGQ---QGVDGLRGK---------PGAPGLPGDP 1316
Query: 179 GKRGPKGDMGYPGRI------------GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
G RG +G G G G G G+ G PG G GR G +G PG DGL
Sbjct: 1317 GPRGTQGPKGSKGEQGQKGKQGQQGERGSRGSPGVVGLPGPRGTVGREGREGFPGTDGLA 1376
Query: 227 GKD---GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
GKD G PG G +GE G+ G G GK G+ G+PG
Sbjct: 1377 GKDGSRGTPGDQGDDGEFGLPGKPGAPGKVGVIGLPG 1413
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 94/217 (43%), Gaps = 60/217 (27%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV------------------GPPGP--- 150
PG G IG+ GE+G KG G++G G G G+ GP GP
Sbjct: 1024 PGHAGKIGESGEVGPKGFPGIQGPSGATGDKGIAGEPGPSGPPGTLGPQGNPGPKGPAGK 1083
Query: 151 ---QGIPGDEGKRGP---------------------KGDMGYPGPQGIPGDEGKRGPKGD 186
G+PG+ G++G +G+ G GP G G++G G +G+
Sbjct: 1084 VGDSGLPGEPGEKGSIGLAGNAGAAGLIGARGEPGLEGEAGPAGPDGTKGEKGDMGTEGE 1143
Query: 187 MGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK----- 241
G G G+ G+DG PG+PGL G+ G G G G+ G PG G G G GE
Sbjct: 1144 QGVRGDPGIKGKDGPPGDPGLTGVRGPEGKSGKSGERGKPGLKGAKGNIGHLGETGSVGK 1203
Query: 242 ----GMTGPRGNRGKSGINGVPGT------PAICAYK 268
G TGP+G+RG G G PG P I Y+
Sbjct: 1204 IGPIGTTGPKGSRGTIGHAGAPGRMGLQGDPGISGYE 1240
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 86/191 (45%), Gaps = 34/191 (17%)
Query: 108 EYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG 167
E P G G G+KG++G +GE GV+G+ G KG G G PG G+ G EGK G G+ G
Sbjct: 1122 EAGPAGPDGTKGEKGDMGTEGEQGVRGDPGIKGKDGPPGDPGLTGVRGPEGKSGKSGERG 1181
Query: 168 YPGPQGIPGDEGK---------------RGPKGDMGYPGRIGLDGRDGLPGEPGLDG--- 209
PG +G G+ G GPKG G G G GR GL G+PG+ G
Sbjct: 1182 KPGLKGAKGNIGHLGETGSVGKIGPIGTTGPKGSRGTIGHAGAPGRMGLQGDPGISGYEG 1241
Query: 210 ---------------IPGRNGMDG-IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
G G DG + G G PG G G G GE G G G +G
Sbjct: 1242 HKGPQGPIGPPGPKGAKGEQGDDGKVEGPTGAPGLRGPVGKRGDRGEPGDPGYVGQQGVD 1301
Query: 254 GINGVPGTPAI 264
G+ G PG P +
Sbjct: 1302 GLRGKPGAPGL 1312
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 82/169 (48%), Gaps = 33/169 (19%)
Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK--------------- 163
G+KG+ G KG++G+ VG PGP G+ G EG++G K
Sbjct: 602 GKKGDPGLSPGKAPKGDKGD------VGLPGPVGLVGVEGRKGQKGHPGPPGLPGEPGEQ 655
Query: 164 ------GDMGYPGPQGIPGDEGKRGPKGDMGY---PGRIGLDGRDGLPGEPGLDGIPGRN 214
G GYPG QG+PG G GPKG G+ PG GL G DG G PG G G+
Sbjct: 656 GPVGEAGAKGYPGRQGLPGPIGPVGPKGARGFIGIPGLFGLPGADGERGSPGPPGKRGKM 715
Query: 215 GMDGIP---GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G P G+ G PG DG PG G G G+ G G+ G +G GVPG
Sbjct: 716 GRPGFPGDFGERGPPGLDGEPGVIGAPGPPGVLGLIGDMGPAGTVGVPG 764
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 95/206 (46%), Gaps = 63/206 (30%)
Query: 121 KGEIGAK---GEMGVKGERGEKGAPGVVGPPGPQGI-----PGDE----GKRGPKGDMGY 168
+G++G+K G +G++G +GE+G G GP G +G+ PG E G++G +G+MG
Sbjct: 889 EGQMGSKGFPGALGLEGVKGEQGVTGKAGPMGERGLVGFIGPGGEAGLAGEKGDRGEMGL 948
Query: 169 PGPQ---------------------------------GIPGDEGKRGPKGDMGYPGRIGL 195
PGP GI G +G+RGP+G G PG IG
Sbjct: 949 PGPPGEKGSTGHPGTPGEGGPPGPPGSPGSPGSRGPIGIRGPKGRRGPRGPDGVPGEIGT 1008
Query: 196 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT----------- 244
+G+ G G PG G PG G G G+ G G GI G +G G+KG+
Sbjct: 1009 EGKKGPDGPPGKIGFPGHAGKIGESGEVGPKGFPGIQGPSGATGDKGIAGEPGPSGPPGT 1068
Query: 245 -------GPRGNRGKSGINGVPGTPA 263
GP+G GK G +G+PG P
Sbjct: 1069 LGPQGNPGPKGPAGKVGDSGLPGEPG 1094
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 90/211 (42%), Gaps = 57/211 (27%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKG---------------------ERGEKGAPGVVGPPGP 150
PGL GP G KG+ GA+G G +G + G KG PG +G G
Sbjct: 847 PGLNGPEGPKGKPGARGLPGPRGAAGREGDEGPLGPPGPFGLEGQMGSKGFPGALGLEGV 906
Query: 151 QGIPGDEGKRGPKGD---MGYPGPQGIPGDEGKRGPKGDMGYPG---------------- 191
+G G GK GP G+ +G+ GP G G G++G +G+MG PG
Sbjct: 907 KGEQGVTGKAGPMGERGLVGFIGPGGEAGLAGEKGDRGEMGLPGPPGEKGSTGHPGTPGE 966
Query: 192 -----------------RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 234
IG+ G G G G DG+PG G +G G DG PGK G PG
Sbjct: 967 GGPPGPPGSPGSPGSRGPIGIRGPKGRRGPRGPDGVPGEIGTEGKKGPDGPPGKIGFPGH 1026
Query: 235 NGTNGEKGMTGPRGNRGKSGINGVPGTPAIC 265
G GE G GP+G G G +G G I
Sbjct: 1027 AGKIGESGEVGPKGFPGIQGPSGATGDKGIA 1057
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 93/225 (41%), Gaps = 60/225 (26%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGP---QGIPGDE 157
GF E PPGL G + G IGA G GV G G+ G G VG PG +G+PG+
Sbjct: 719 GFPGDFGERGPPGLDG---EPGVIGAPGPPGVLGLIGDMGPAGTVGVPGLNGLKGVPGNM 775
Query: 158 GK---RGPKGDMGYPGPQ---------------GIPGDEGKRGPKGDMGY---------- 189
G+ +G KGD+G PG Q G+PG GK GP+G G
Sbjct: 776 GESGLKGDKGDVGLPGEQGEIGFQGDKGVQGLPGLPGPRGKPGPQGKTGEIGPSGLPGPP 835
Query: 190 --------PGRIGLDGRDGLPGEPGLDGIPGRNGM------------------DGIPGKD 223
G+ GL+G +G G+PG G+PG G +G G
Sbjct: 836 GPEGFPGDIGKPGLNGPEGPKGKPGARGLPGPRGAAGREGDEGPLGPPGPFGLEGQMGSK 895
Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G PG G+ G G G G GP G RG G G G + K
Sbjct: 896 GFPGALGLEGVKGEQGVTGKAGPMGERGLVGFIGPGGEAGLAGEK 940
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 88/187 (47%), Gaps = 42/187 (22%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG-------- 164
G+ G +G+ G G KG++G+ GE+GE G G G G G+PG GK GP+G
Sbjct: 770 GVPGNMGESGLKGDKGDVGLPGEQGEIGFQGDKGVQGLPGLPGPRGKPGPQGKTGEIGPS 829
Query: 165 -------------DMGYP------GPQGIPGDEGKRGPKGDMGYPG------------RI 193
D+G P GP+G PG G GP+G G G
Sbjct: 830 GLPGPPGPEGFPGDIGKPGLNGPEGPKGKPGARGLPGPRGAAGREGDEGPLGPPGPFGLE 889
Query: 194 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKS 253
G G G PG GL+G+ G G+ GK G G+ G+ G G GE G+ G +G+RG+
Sbjct: 890 GQMGSKGFPGALGLEGV---KGEQGVTGKAGPMGERGLVGFIGPGGEAGLAGEKGDRGEM 946
Query: 254 GINGVPG 260
G+ G PG
Sbjct: 947 GLPGPPG 953
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 69/142 (48%), Gaps = 33/142 (23%)
Query: 134 GERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPK--------- 184
G +G+KG PG+ PG + +G KGD+G PGP G+ G EG++G K
Sbjct: 599 GLKGKKGDPGLS--------PG-KAPKGDKGDVGLPGPVGLVGVEGRKGQKGHPGPPGLP 649
Query: 185 ------GDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
G +G G G GR GLPG G G G G GIPG GLPG DG
Sbjct: 650 GEPGEQGPVGEAGAKGYPGRQGLPGPIGPVGPKGARGFIGIPGLFGLPGADG-------- 701
Query: 239 GEKGMTGPRGNRGKSGINGVPG 260
E+G GP G RGK G G PG
Sbjct: 702 -ERGSPGPPGKRGKMGRPGFPG 722
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 94 IPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGI 153
I L QG E PG GP G++G G G G +G+RG KG PG +G PG G+
Sbjct: 1409 IGLPGPQGSFGPKGERGLPGHPGPSGKRGFKGGMGLPGPQGDRGSKGQPGDIGEPGFPGM 1468
Query: 154 PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
G G +GP GD G P+GI +G +GP+G+MG G G G G G PG G G
Sbjct: 1469 LGMFGPKGPPGDFG---PKGI---QGPKGPQGNMGRGGLAGPVGVIGPIGNPGSRGDTGN 1522
Query: 214 NGMDGI 219
G G+
Sbjct: 1523 KGELGV 1528
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 86/169 (50%), Gaps = 24/169 (14%)
Query: 113 GLQGPIGQKGEIG---AKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP 169
G++GP G++G G GE+G +G++G G PG +G PG G G+ G+ GPKG G
Sbjct: 986 GIRGPKGRRGPRGPDGVPGEIGTEGKKGPDGPPGKIGFPGHAGKIGESGEVGPKGFPGIQ 1045
Query: 170 GPQGIPGDEG------------KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
GP G GD+G GP+G+ G G G G GLPGEPG G G G
Sbjct: 1046 GPSGATGDKGIAGEPGPSGPPGTLGPQGNPGPKGPAGKVGDSGLPGEPGEKGSIGLAGNA 1105
Query: 218 GIP------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G+ GL G+ G G +GT GEKG G G+ G+ G PG
Sbjct: 1106 GAAGLIGARGEPGLEGEAGPAGPDGTKGEKGDMG---TEGEQGVRGDPG 1151
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 81/211 (38%), Gaps = 72/211 (34%)
Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYP------------GP 171
IG +G G +G RG G PG +G G +G GP G +G+P GP
Sbjct: 985 IGIRGPKGRRGPRGPDGVPGEIG------TEGKKGPDGPPGKIGFPGHAGKIGESGEVGP 1038
Query: 172 QGIPGDEGKRGPKGDMGY------------------PGRIGLDGR---DGLPGEP----- 205
+G PG +G G GD G PG G G+ GLPGEP
Sbjct: 1039 KGFPGIQGPSGATGDKGIAGEPGPSGPPGTLGPQGNPGPKGPAGKVGDSGLPGEPGEKGS 1098
Query: 206 ----------------------------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
G DG G G G G+ G+ G GI G +G
Sbjct: 1099 IGLAGNAGAAGLIGARGEPGLEGEAGPAGPDGTKGEKGDMGTEGEQGVRGDPGIKGKDGP 1158
Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G+ G+TG RG GKSG +G G P + K
Sbjct: 1159 PGDPGLTGVRGPEGKSGKSGERGKPGLKGAK 1189
>sp|O46392|CO1A2_CANFA Collagen alpha-2(I) chain OS=Canis familiaris GN=COL1A2 PE=2 SV=2
Length = 1366
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
G QGP G GE G +G G G G G PG+ G PG +G+PG +G P G MG PGP+
Sbjct: 367 GAQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADG---PAGVMGPPGPR 423
Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
G G G RGP GD G PG GL G G PG PG G G+ G G+PG DG PG G
Sbjct: 424 GATGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPA 483
Query: 233 GTNGTNGEKGMTGPRGNRGKSGING 257
G G G G GP+G G G NG
Sbjct: 484 GARGEPGNIGFPGPKGPTGDPGKNG 508
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPG------VVGPPGPQGIPGDEGKRGPKGDM 166
G +GP G+ G G G G++G G +G PG V+GPPGP+G G G RGP GD
Sbjct: 379 GKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGPAGVMGPPGPRGATGPAGVRGPNGDS 438
Query: 167 GYP------GPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGEPGLDGIPGRN 214
G P GP+G PG G GP G G G G+DGR G GEPG G PG
Sbjct: 439 GRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGEPGNIGFPGPK 498
Query: 215 GMDGIPGKD------GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
G G PGK+ GL G G PG +G NG +G GP+G +G G G G P
Sbjct: 499 GPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGF 554
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 85/162 (52%), Gaps = 6/162 (3%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
L+ +GF + P G +GP+G G G G +G G RGE PG +G PGP+G G
Sbjct: 446 LMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGE---PGNIGFPGPKGPTG 502
Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
D GK G KG G G +G PG +G G +G G G G G G G PG G+PG G
Sbjct: 503 DPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPAG 562
Query: 216 MDG---IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
G PG+ GLPG+ G+PG G GE+G G G G SG
Sbjct: 563 TAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSG 604
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 109/248 (43%), Gaps = 31/248 (12%)
Query: 44 KGDIFDNSVPQTPHVEFVP-PDLYEEIREREKEQQNSTHNNPWVWLNAYSRIPLVAMQGF 102
KG+ + P + + P P E R E ++ + P + L G
Sbjct: 354 KGESGNKGEPGSAGAQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGP 413
Query: 103 CNSTKEYCPPGLQGPIGQKG---EIGAKGEMGVKGERGEKGAPGVVGPP---GPQGIPGD 156
P G GP G +G + G GE G+ G RG GAPG VGP GP G+PG
Sbjct: 414 AGVMGPPGPRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGI 473
Query: 157 EGKRGP---------KGDMGYPGPQGIPGDEGKRGPKGDM------GYPGRIGLDGRDGL 201
+G+ GP G++G+PGP+G GD GK G KG G PG G +G G
Sbjct: 474 DGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGP 533
Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM---------TGPRGNRGK 252
PG G+ G G G G PG GLPG G G G GE+G+ GPRG RG
Sbjct: 534 PGPQGVQGGKGEQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGP 593
Query: 253 SGINGVPG 260
G +G G
Sbjct: 594 PGESGAAG 601
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 87/184 (47%), Gaps = 33/184 (17%)
Query: 112 PGLQGPIGQKGEIGAKG------------EMGVKGERGEKGAPGVVGPPG---PQGIPGD 156
PG GP G +GE+G G G+ G +G G PGV G PG P+GIPG
Sbjct: 273 PGPAGPAGPRGEVGLPGVSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGP 332
Query: 157 E------------GKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
G+ GP G G G +G PG G +GP PG G +G+ G GE
Sbjct: 333 VGAAGATGARGIVGEPGPAGSKGESGNKGEPGSAGAQGP------PGPSGEEGKRGPNGE 386
Query: 205 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAI 264
G G G G+ G PG GLPG DG G G G +G TGP G RG +G +G PG P +
Sbjct: 387 AGSAGPSGPPGLRGSPGSRGLPGADGPAGVMGPPGPRGATGPAGVRGPNGDSGRPGEPGL 446
Query: 265 CAYK 268
+
Sbjct: 447 MGPR 450
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG GP G+ G+ G KGE G G G GA G GP GP G G G RG G G GP
Sbjct: 930 PGNDGPPGRDGQAGHKGERGYPGNIGPVGAVGAPGPHGPVGPTGKHGNRGEPGPAGSVGP 989
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
G G G GP+G G G G G GLPG + G NG+ G+PG G G G
Sbjct: 990 VGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPG------LKGHNGLQGLPGLAGQHGDQGA 1043
Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
PG+ G G +G GP G GK G G PGT
Sbjct: 1044 PGSVGPAGPRGPAGPSGPAGKDGRTGQPGT 1073
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 78/154 (50%), Gaps = 6/154 (3%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
P G+ GP G +G G G G G+ G G PG++GP G G PG+ G G +G MG P
Sbjct: 413 PAGVMGPPGPRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLP- 471
Query: 171 PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIPGKDGLPG 227
GI G G GP G G PG IG G G G+PG +G G G+ G PG DG G
Sbjct: 472 --GIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNG 529
Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
G PG G G KG GP G G G+ G GT
Sbjct: 530 AQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPAGT 563
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 76/146 (52%), Gaps = 12/146 (8%)
Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGD 177
+G+ G G+KGE G KGE G GA GPPGP G +EGKRGP G+ G GP G PG
Sbjct: 345 VGEPGPAGSKGESGNKGEPGSAGA---QGPPGPSG---EEGKRGPNGEAGSAGPSGPPG- 397
Query: 178 EGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 237
RG G G PG DG G+ G PG G G G+ G G G PG+ G+ G G
Sbjct: 398 --LRGSPGSRGLPG---ADGPAGVMGPPGPRGATGPAGVRGPNGDSGRPGEPGLMGPRGF 452
Query: 238 NGEKGMTGPRGNRGKSGINGVPGTPA 263
G G GP G G G+ G+ G P
Sbjct: 453 PGAPGNVGPAGKEGPMGLPGIDGRPG 478
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 72/151 (47%), Gaps = 30/151 (19%)
Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDM------------------GYP 169
G MG+ G RG PG G PGPQG G G+ G G G+P
Sbjct: 91 GPMGLMGPRGP---PGASGAPGPQGFQGPAGEPGEPGQTGPAGARGPPGPPGKAGEDGHP 147
Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
G G PG+ G GP+G G+PG GL PG GI G NG+DG+ G+ G PG
Sbjct: 148 GKPGRPGERGVVGPQGARGFPGTPGL---------PGFKGIRGHNGLDGLKGQPGAPGVK 198
Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G PG G NG G TG RG G+ G G PG
Sbjct: 199 GEPGAPGENGTPGQTGARGLPGERGRVGAPG 229
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 118 IGQKGEIGAKGEMGVKGERGEKGAPG------------VVGPPGPQGIPGDEGKRGPKGD 165
G KG G G G G G +G PG +VG PGP G G+ G +G G
Sbjct: 306 TGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGIVGEPGPAGSKGESGNKGEPGS 365
Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
G GP G G+EGKRGP G+ G G G G G PG GL G G G+ G PG G
Sbjct: 366 AGAQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGPAGVMGPPGPRGA 425
Query: 226 PGKDGIPGTNGTNG---EKGMTGPR------GNRGKSGINGVPGTPAI 264
G G+ G NG +G E G+ GPR GN G +G G G P I
Sbjct: 426 TGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGI 473
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGE---------------IGAKGEMGVKGERGEKGAPGV- 144
G T PPG G G GE +GA G +G+ G RGE+G PGV
Sbjct: 829 GRTGETGASGPPGFTGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVA 888
Query: 145 --VGPPGPQGI---------------PGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
VG PGP GI PG G G G G PG G PG +G+ G KG+
Sbjct: 889 GSVGEPGPLGIAGPPGARGPPGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQAGHKGER 948
Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
GYPG IG G G PG G G G++G G PG G G G G G +G +G+ G +
Sbjct: 949 GYPGNIGPVGAVGAPGPHGPVGPTGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDK 1008
Query: 248 GNRGKSGINGVPG 260
G G+ G G+PG
Sbjct: 1009 GEPGEKGPRGLPG 1021
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 98 AMQGFCNSTKEYCPPGLQG---PIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP 154
+QG PPG QG P G GE+G GE G+ GE G PG GP G +G P
Sbjct: 538 GVQGGKGEQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFG---LPGPAGPRGERGPP 594
Query: 155 GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR- 213
G+ G GP G +G GP G PG +G +G G +G PG G G GLPGE G GIPG
Sbjct: 595 GESGAAGPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGASGPGGLPGERGAAGIPGGK 654
Query: 214 --------NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
G G PG+DG G PG G G G TG RG
Sbjct: 655 GEKGETGLRGEIGNPGRDGA---RGAPGAMGAPGPAGATGDRG 694
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 81/153 (52%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
L+ +G ++ P G QGP G+ GE G G G +G G G G G PG G PG
Sbjct: 95 LMGPRGPPGASGAPGPQGFQGPAGEPGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPG 154
Query: 156 DEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
+ G GP+G G+PG G+PG +G RG G G G+ G G G PG PG +G PG+ G
Sbjct: 155 ERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTG 214
Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
G+PG+ G G G G G++G G GP G
Sbjct: 215 ARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG 247
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 64/136 (47%), Gaps = 24/136 (17%)
Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGL------------ 195
PGP G+ G RGP G G PGPQG +GP G+ G PG+ G
Sbjct: 90 PGPMGL---MGPRGPPGASGAPGPQGF------QGPAGEPGEPGQTGPAGARGPPGPPGK 140
Query: 196 ---DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
DG G PG PG G+ G G G PG GLPG GI G NG +G KG G G +G+
Sbjct: 141 AGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGE 200
Query: 253 SGINGVPGTPAICAYK 268
G G GTP +
Sbjct: 201 PGAPGENGTPGQTGAR 216
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 84/163 (51%), Gaps = 18/163 (11%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKG------------APGVVGPPGPQGIPGDEGKR 160
G QGP+G+ GE GA G G GE+G G G++G PG G+PG G+R
Sbjct: 823 GDQGPVGRTGETGASGPPGFTGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRGER 882
Query: 161 G-P--KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMD 217
G P G +G PGP GI G G RGP G +G PG G G G G PG DG PGR+G
Sbjct: 883 GLPGVAGSVGEPGPLGIAGPPGARGPPGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQA 942
Query: 218 GIPGKDGLPGKDGIPGTNGTNGEKGMTGP---RGNRGKSGING 257
G G+ G PG G G G G G GP GNRG+ G G
Sbjct: 943 GHKGERGYPGNIGPVGAVGAPGPHGPVGPTGKHGNRGEPGPAG 985
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 83/201 (41%), Gaps = 53/201 (26%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGYP 169
G G G KGE GA GE G G+ G +G PG VG PGP G G +G GP G G P
Sbjct: 190 GQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG-P 248
Query: 170 -------------------GPQGIPGDEGKRGPKGDMGYPG---------------RIGL 195
GP G PG G GP+G++G PG G
Sbjct: 249 IGSAGPPGFPGAPGPKGEIGPVGNPGPAGPAGPRGEVGLPGVSGPVGPPGNPGANGLTGA 308
Query: 196 DGRDGLPGEPGLDGIPGRNGMDGI---------------PGKDGLPGKDGIPGTNGTNGE 240
G GLPG G G+PG G+ G PG G G+ G G G+ G
Sbjct: 309 KGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGIVGEPGPAGSKGESGNKGEPGSAGA 368
Query: 241 KGMTGPRGNRGKSGINGVPGT 261
+G GP G GK G NG G+
Sbjct: 369 QGPPGPSGEEGKRGPNGEAGS 389
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 53/99 (53%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG G +G G +G +G G +G RG+KG PG GP G G+ G G +G G G G
Sbjct: 981 PGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGLAGQHGD 1040
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
QG PG G GP+G G G G DGR G PG G GI
Sbjct: 1041 QGAPGSVGPAGPRGPAGPSGPAGKDGRTGQPGTVGPAGI 1079
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 65/149 (43%), Gaps = 45/149 (30%)
Query: 157 EGKRGPKGDM------GYPGPQGIPGDEGKRGPKGD---------------MGYPGRIGL 195
EG RGP+GD G G G PG G++GP G+ +G PG +GL
Sbjct: 816 EGLRGPRGDQGPVGRTGETGASGPPGFTGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGL 875
Query: 196 D---GRDGLP------GEPGLDGI---------------PGRNGMDGIPGKDGLPGKDGI 231
G GLP GEPG GI PG NG G G+DG PG DG
Sbjct: 876 PGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPPGAVGAPGVNGAPGEAGRDGNPGNDGP 935
Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
PG +G G KG G GN G G G PG
Sbjct: 936 PGRDGQAGHKGERGYPGNIGPVGAVGAPG 964
Score = 40.8 bits (94), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 82/230 (35%), Gaps = 87/230 (37%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---GPKGDMGY 168
PG +G G G G KG+ G G +GE GAPG G PG G R G +G +G
Sbjct: 174 PGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGE------NGTPGQTGARGLPGERGRVGA 227
Query: 169 PGPQGI---------------------------------------PGDEGKRGPKGDMGY 189
PGP G PG G GP+G++G
Sbjct: 228 PGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGPVGNPGPAGPAGPRGEVGL 287
Query: 190 PG------------RIGLDGRDGLPGEPGLDGIPGRNGMDGIP----------------- 220
PG GL G G G PG+ G PG G GIP
Sbjct: 288 PGVSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGIVGE 347
Query: 221 ----------GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G PG G G G +GE+G GP G G +G +G PG
Sbjct: 348 PGPAGSKGESGNKGEPGSAGAQGPPGPSGEEGKRGPNGEAGSAGPSGPPG 397
Score = 37.0 bits (84), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%)
Query: 97 VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD 156
V G P G++G G+ GE G +G G+KG G +G PG+ G G QG PG
Sbjct: 987 VGPVGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGLAGQHGDQGAPGS 1046
Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRG 182
G GP+G G GP G G G+ G
Sbjct: 1047 VGPAGPRGPAGPSGPAGKDGRTGQPG 1072
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 112 PGLQGP---IGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
PG +GP G KG G +G G+ G+ G++GAPG VGP GP+G G G G G G
Sbjct: 1011 PGEKGPRGLPGLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGQ 1070
Query: 169 P---GPQGIPGDE 178
P GP GI G +
Sbjct: 1071 PGTVGPAGIRGSQ 1083
>sp|P02462|CO4A1_HUMAN Collagen alpha-1(IV) chain OS=Homo sapiens GN=COL4A1 PE=1 SV=3
Length = 1669
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 37/187 (19%)
Query: 112 PGLQGPIGQKGEIGAKGE--------MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK 163
PG QG G G+ GAKGE +G+ G RGEKG G+ G PG G++G K
Sbjct: 1031 PGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAG------FPGSPGEKGEK 1084
Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG-- 221
G +G PG +PG G +G G +GYPG GL G G G PGLDGIPG G G+PG
Sbjct: 1085 GSIGIPG---MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTP 1141
Query: 222 -------KDGLPGKDGIPGTNGTNGEKGM-----------TGPRGNRGKSGINGVPGTPA 263
+ G PG DGIPG+ G GE G+ G +G++G+ G G+ G+P
Sbjct: 1142 GPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPG 1201
Query: 264 ICAYKRE 270
I K E
Sbjct: 1202 IPGSKGE 1208
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 36/173 (20%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG QG G G G+KGEMGV G G+ G+PG VG PG +PG+ KGD G+PG
Sbjct: 863 PGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPG---LPGE------KGDHGFPGS 913
Query: 172 QGIPGDEGKRGPKGDMGYPGR------------------------IGLDGRDGLPGEPGL 207
G GD G +G KGD+G PG+ IG G G G+PG
Sbjct: 914 SGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGT 973
Query: 208 DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G+PG++G G PG+ PG G PG +GT G G+ GP+G+ G G+ G PG
Sbjct: 974 PGVPGKDGQAGQPGQ---PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPG 1023
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
GQKG+ G KG++G GE+G +G PG G PG G G G+ GPKGD PG G PG
Sbjct: 948 GQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD---PGISGTPGAP 1004
Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
G GPKG +G G+ GLPG PG G+PG IPG G PG +PG G
Sbjct: 1005 GLPGPKGSVG-----GM----GLPGTPGEKGVPG------IPGPQGSPG---LPGDKGAK 1046
Query: 239 GEKGMTGP--------RGNRGKSGINGVPGTPA 263
GEKG GP RG +G GI G PG+P
Sbjct: 1047 GEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPG 1079
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 91/172 (52%), Gaps = 28/172 (16%)
Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
GPIG+KG G G GV G+ G+ G PG GP PG G PG G GPKG +
Sbjct: 960 GPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP 1019
Query: 167 ---------GYPGPQ---GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRN 214
G PGPQ G+PGD+G +G KG G PG IG+ G G G+ G+ G PG
Sbjct: 1020 GTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSP 1078
Query: 215 GMD------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G GIPG G PG G PG+ G G G+ G +G++G G++G+PG
Sbjct: 1079 GEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 1130
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 94/186 (50%), Gaps = 37/186 (19%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG---------------APGVVG-P--PGPQ-- 151
PG G GQ G+ G KG+ G+ G G G PG G P PGPQ
Sbjct: 977 PGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGS 1036
Query: 152 -GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD------GLPGE 204
G+PGD+G +G KG G PG GIPG G++G +G G+PG G G G+PG
Sbjct: 1037 PGLPGDKGAKGEKGQAGPPG-IGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGS 1095
Query: 205 PGLDGIPGRNGMDGIP------GKDGLPGKDGIPGTNGTN---GEKGMTGPRGNRGKSGI 255
PGL G PG G G P G GLPG DGIPG G G G TGP G +G+ G
Sbjct: 1096 PGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGS 1155
Query: 256 NGVPGT 261
+G+PG+
Sbjct: 1156 DGIPGS 1161
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 86/176 (48%), Gaps = 25/176 (14%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PGL P G KG+ GA+G G+ G+ G G PG G PG G PG +G+ G G G PG
Sbjct: 834 PGLDMP-GPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGS 892
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD------------- 217
G G G G KGD G+PG G G GL G+ G G+PG+ G MD
Sbjct: 893 PGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGD 952
Query: 218 ----------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G G G PG G+PG +G G+ G GP+G+ G SG G PG P
Sbjct: 953 QGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPG 1008
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 75/143 (52%), Gaps = 16/143 (11%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG-------P--K 163
G G G+KGE G+ G G+ G G KG+PG VG PG G+PG++G +G P K
Sbjct: 1073 GFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVK 1132
Query: 164 GDMGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
G+ G PG P G G++G G G PG G G GLPG G G PG G G
Sbjct: 1133 GEAGLPGTPGPTGP---AGQKGEPGSDGIPGSAGEKGEPGLPGR-GFPGFPGAKGDKGSK 1188
Query: 221 GKDGLPGKDGIPGTNGTNGEKGM 243
G+ G PG G PG G+ GE+G
Sbjct: 1189 GEVGFPGLAGSPGIPGSKGEQGF 1211
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPG----DE 178
EIG G+ G KG+RG G GV G PGPQG PG +G PG +G PG D
Sbjct: 487 EIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGL---------IGQPGAKGEPGEFYFDL 537
Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 228
+G KGD G+PG+ G+ GR G PG DG PG G G PG GL G+
Sbjct: 538 RLKGDKGDPGFPGQPGMTGRAG---SPGRDGHPGLPGPKGSPGSVGLKGE 584
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 81/178 (45%), Gaps = 46/178 (25%)
Query: 111 PPGL--QGPIGQKGEIGAKGEMGVKGERGEKGAPGV-----VGPPGPQGIPGDEGKRGPK 163
PPG+ Q + +KG+ KGE G KGE G +G PGV G PGP+G PG +G +G K
Sbjct: 239 PPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEK 298
Query: 164 GDMGYPGPQGIPGDEGKRGPKGDMGYP------------GRIGLDGRDGLPGEPGLDGIP 211
G G+PG G PG G++GP+G+ G G +G G G PG PG G P
Sbjct: 299 GSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEP 358
Query: 212 GRNGMD--------------------GIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGN 249
G G G PG+ G G G PGT+ + GP G
Sbjct: 359 GPKGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGTS-------LPGPSGR 409
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 72/149 (48%), Gaps = 33/149 (22%)
Query: 127 KGEMGV--KGERGEKGAPGVVGPPGPQGIPG--------DEGKRGPKGDMGYPGPQGIPG 176
KG+MG+ +G +G+KG GV GPPG +PG D +G KG G PG QG+PG
Sbjct: 217 KGQMGLSFQGPKGDKGDQGVSGPPG---VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPG 273
Query: 177 -----DEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-------- 223
+ GK GP+G G G G G G PGEPG G+ GR G G G+
Sbjct: 274 VGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGI 333
Query: 224 -------GLPGKDGIPGTNGTNGEKGMTG 245
G G+ G PGT G GE G G
Sbjct: 334 VIGTGPLGEKGERGYPGTPGPRGEPGPKG 362
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 85/203 (41%), Gaps = 66/203 (32%)
Query: 112 PGLQGPIGQKGEIGA---KGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
PG GP GQKGE G+ G GE+GE G PG P G PG +G +G KG++G+
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSA---GEKGEPGLPGRGFP----GFPGAKGDKGSKGEVGF 1193
Query: 169 P---GPQGIPGDEGKR-----------------------GPKGDM--------------- 187
P G GIPG +G++ GPKGD
Sbjct: 1194 PGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPM 1253
Query: 188 ---------------GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIP 232
G PG G G G G+PG G+PG G GI G G G G+P
Sbjct: 1254 GPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVP 1313
Query: 233 GTNGTNGEKGMTGPRGNRGKSGI 255
G G G G+ G +G++G G+
Sbjct: 1314 GFQGPKGLPGLQGIKGDQGDQGV 1336
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 58/136 (42%), Gaps = 43/136 (31%)
Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGP-------------------- 183
+ GPPG +G+PG G GP+GD G+PG G PG G++G
Sbjct: 644 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGL 703
Query: 184 KGDM------------GYPGR-----------IGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
GDM G PG +GL G GLPG PG+ G PG G G+P
Sbjct: 704 PGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVP 763
Query: 221 GKDGLPGKDGIPGTNG 236
G G G G PG G
Sbjct: 764 GVPGEHGAIGPPGLQG 779
Score = 40.8 bits (94), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 79/185 (42%), Gaps = 43/185 (23%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK------------- 159
GL G G G G KG +GV G GE GA +GPPG QGI G+ G
Sbjct: 743 GLPGLPGIPGTPGEKGSIGVPGVPGEHGA---IGPPGLQGIRGEPGPPGLPGSVGSPGVP 799
Query: 160 -------------------------RGPKGDMGYPG--PQGIPGDEGKRGPKGDMGYPGR 192
+G KG G+PG G GD+G +G G G G
Sbjct: 800 GIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGL 859
Query: 193 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGK 252
GL G+ G PG PG G G G+ G PG+ G PG G PG G G+ G G G RG
Sbjct: 860 PGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGD 919
Query: 253 SGING 257
G+ G
Sbjct: 920 PGLKG 924
Score = 40.4 bits (93), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 157 EGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD--GIPGRN 214
+G +G KGD G GP G+PG + + KGD G G G G G PG+ G PG+
Sbjct: 225 QGPKGDKGDQGVSGPPGVPG-QAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKP 283
Query: 215 GMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
G G PGKDG G+ G PG G G G+ G +G +G+ G
Sbjct: 284 GPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKG 323
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 44/68 (64%), Gaps = 6/68 (8%)
Query: 131 GVKGERGEKGAP---GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
GVKG++GE+G P GV+G PG QG G +G G KGD G P G+PG +G RGP G
Sbjct: 43 GVKGQKGERGLPGLQGVIGFPGMQGPEGPQGPPGQKGDTGEP---GLPGTKGTRGPPGAS 99
Query: 188 GYPGRIGL 195
GYPG GL
Sbjct: 100 GYPGNPGL 107
>sp|P35248|SFTPD_RAT Pulmonary surfactant-associated protein D OS=Rattus norvegicus
GN=Sftpd PE=1 SV=1
Length = 374
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 88/163 (53%), Gaps = 6/163 (3%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG +GP+G KGE G+ GE G KGERG +VGPPG GI G GK GP G G GP
Sbjct: 77 PGPRGPVGPKGENGSAGEPGPKGERG------LVGPPGSPGISGPAGKEGPSGKQGNIGP 130
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
QG PG +G+ GPKG++G PG G G G G G G PG G G G G G G
Sbjct: 131 QGKPGPKGEAGPKGEVGAPGMQGSAGAKGPAGPKGERGAPGEQGAPGNAGAAGPAGPAGP 190
Query: 232 PGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
G G+ G G+ G RG G GI G G P A +++ +L
Sbjct: 191 QGAPGSRGPPGLKGDRGAPGDRGIKGESGLPDSAALRQQMEAL 233
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 102 FCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRG 161
C+ T+ P G G G++G G KG+ G+ G G G PG GP GP+G G G+ G
Sbjct: 38 LCSPTENGLP-GRDGRDGREGPRGEKGDPGLPGPMGLSGLPGPRGPVGPKGENGSAGEPG 96
Query: 162 PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG 221
PKG+ G GP G PG G G +G G G IG G+ G GE G
Sbjct: 97 PKGERGLVGPPGSPGISGPAGKEGPSGKQGNIGPQGKPGPKGEAGPK------------- 143
Query: 222 KDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSG 254
G+ G PG G+ G KG GP+G RG G
Sbjct: 144 -----GEVGAPGMQGSAGAKGPAGPKGERGAPG 171
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 152 GIPGD------EGKRGPKGDMGYPGP---QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP 202
G+PG EG RG KGD G PGP G+PG G GPKG+ G G G G GL
Sbjct: 45 GLPGRDGRDGREGPRGEKGDPGLPGPMGLSGLPGPRGPVGPKGENGSAGEPGPKGERGLV 104
Query: 203 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G PG GI G G +G GK G G G PG G G KG G G +G +G G G
Sbjct: 105 GPPGSPGISGPAGKEGPSGKQGNIGPQGKPGPKGEAGPKGEVGAPGMQGSAGAKGPAG 162
>sp|P17140|CO4A2_CAEEL Collagen alpha-2(IV) chain OS=Caenorhabditis elegans GN=let-2 PE=1
SV=2
Length = 1758
Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 91/168 (54%), Gaps = 25/168 (14%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PGL G G KG++G G G+ G++GE G GV G PG G PG KGD G PG
Sbjct: 790 PGLPGIPGPKGDVGNPGLPGLNGQKGEPGV-GVPGQPGSPGFPGL------KGDAGLPGL 842
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG------------EPGLDGIPGRNGMDGI 219
G PG EG+RG +PG GL G DGLPG + GL G+PGR G G
Sbjct: 843 PGTPGLEGQRG------FPGAPGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGF 896
Query: 220 PGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAY 267
PG+DGLPG G+ G +G G G+TG +G+ G G +G PG P Y
Sbjct: 897 PGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAPGY 944
Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 90/185 (48%), Gaps = 32/185 (17%)
Query: 119 GQKGEIGAK---------------GEMGVKGERGEKGAPGVVGPPGP---------QGIP 154
G G G K G G+KG+RG G PG G GP G+P
Sbjct: 982 GMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGEAGPAARDGQKGDAGLP 1041
Query: 155 GDEGKRGPKGDMGYPGPQGIPGDE-----GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
G G RGP+G G PG G G+ G+ G G+ G PG G GR G PG PG DG
Sbjct: 1042 GQPGLRGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDG 1101
Query: 210 IPGRNGM---DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICA 266
+PG GM G PG+DGLPG+DG+PG G G+ G +G G G G++G PG P I
Sbjct: 1102 LPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRG 1161
Query: 267 YKRES 271
K +
Sbjct: 1162 DKGQG 1166
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 95/184 (51%), Gaps = 32/184 (17%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKG-----ERGEKGAPGVVGPPGPQGIPGDEGKRG----P- 162
G QGP G G G KGE G+ G + GEKG PG+ G G QG PG G+ G P
Sbjct: 1048 GPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDGLPGFPG 1107
Query: 163 -KGDMGYPGPQGIPGDE---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDG 218
KG+ GYPG G+PG + G G KGD+G G+ GL G GL G+PG+ GI G G G
Sbjct: 1108 MKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGG 1167
Query: 219 IPGKDGLPGKDGIPGTNGTNG------------EKGMTGP------RGNRGKSGINGVPG 260
+PG G G DG PG G NG EKG G +G+ G G +G+PG
Sbjct: 1168 LPGIPGDRGMDGYPGQKGENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPG 1227
Query: 261 TPAI 264
P +
Sbjct: 1228 IPGL 1231
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV---VGPPGPQGIPGDEGKRGPKGDMGY 168
PGL G GQKGE G +GV G+ G G PG+ G PG G PG EG+RG G G
Sbjct: 805 PGLPGLNGQKGEPG----VGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGL 860
Query: 169 PGPQGIPGDEGKRG---PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-- 223
G G+PG G+ G KGD G PG G +G G PG+ GL G+PG G DG+PG
Sbjct: 861 KGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGV 920
Query: 224 -GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
GL G G PG +G G G G G +G +GI GVPG
Sbjct: 921 TGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPG 958
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 94/196 (47%), Gaps = 22/196 (11%)
Query: 82 NNPWV-WLNAYSRIPLVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKG 140
NP + LN P V + G S PG G G G G G G++G+RG G
Sbjct: 803 GNPGLPGLNGQKGEPGVGVPGQPGS------PGFPGLKGDAGLPGLPGTPGLEGQRGFPG 856
Query: 141 APGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG 200
APG+ G G G+ G G G KGD G PG +PG EG G G G PG G+ G DG
Sbjct: 857 APGLKGGDGLPGLSGQPGYPGEKGDAGLPG---VPGREGSPGFPGQDGLPGVPGMKGEDG 913
Query: 201 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTG------------PRG 248
LPG PG+ G+ G G G G GLPG G PG G G G+ G G
Sbjct: 914 LPGLPGVTGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNG 973
Query: 249 NRGKSGINGVPGTPAI 264
+G+ G+ G+PGTP +
Sbjct: 974 PKGEPGVPGMPGTPGM 989
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 65/117 (55%)
Query: 152 GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP 211
G+PG +G+ G G G PG +G G G G KGD+G G G G DGLPG PG DG P
Sbjct: 1289 GLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQP 1348
Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G G+ G G GLPG+ G PG G GE G+ G G +G++G G PG P K
Sbjct: 1349 GIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEK 1405
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 125 GAKGEMGVKGERGEKGAPGVVGPPGPQG------------------------IPGDEGKR 160
G KGE G G GE G PG G PG +G +PG G
Sbjct: 737 GTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIP 796
Query: 161 GPKGDMGYPGPQGIPGDEGKRG-----PKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG 215
GPKGD+G PG G+ G +G+ G G G+PG G G GLPG PGL+G G G
Sbjct: 797 GPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPG 856
Query: 216 MDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRE 270
G+ G DGLPG G PG G G+ G+ G G G G G G P + K E
Sbjct: 857 APGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGE 911
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 85/162 (52%), Gaps = 19/162 (11%)
Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG------------KRGPKGDMGYP 169
G+ G G G KGE G G PG VG PG G+PG +G G GD G+
Sbjct: 728 GQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGF- 786
Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
G+PG G GPKGD+G PG GL+G+ GEPG+ G+PG+ G G PG G G
Sbjct: 787 --GGVPGLPGIPGPKGDVGNPGLPGLNGQK---GEPGV-GVPGQPGSPGFPGLKGDAGLP 840
Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRES 271
G+PGT G G++G G G +G G+ G+ G P K ++
Sbjct: 841 GLPGTPGLEGQRGFPGAPGLKGGDGLPGLSGQPGYPGEKGDA 882
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PGL GP G+ G G G+ + G G+ G PG+ G PG +G G G RGP GD
Sbjct: 439 PGLPGPKGEPGYRGTPGQS-IPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDS----L 493
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-----MDGIPGKDGLP 226
G+PG G+RG G GY GR DG +GLPG PG G R G G G+ GLP
Sbjct: 494 NGLPGAPGQRGAPGPNGYDGR---DGVNGLPGAPGTKGD--RGGTCSACAPGTKGEKGLP 548
Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGI 255
G G PG G G GM GP G+ G G+
Sbjct: 549 GYSGQPGPQGDRGLPGMPGPVGDAGDDGL 577
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 99/235 (42%), Gaps = 80/235 (34%)
Query: 113 GLQGPIGQKGEIGAKGE---------------MGVKGERGEKGAPGVVGPPGPQGIPGDE 157
GL G GQKG++G G+ G++G++G+ G PG+ G G G PG +
Sbjct: 1125 GLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGGLPGIPGDRGMDGYPGQK 1184
Query: 158 GKRG-------------------P-----KGDMGYPGPQGIPGDEGKRGPKGDMGYPGRI 193
G+ G P KG GYPG G+PG G KGD G+PG+
Sbjct: 1185 GENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPGIPGL---KGDSGFPGQP 1241
Query: 194 GLDGRDGLPGE-----------------------------------PGLDGIPGRNGMDG 218
G +G GL GE PGL G G +G+ G
Sbjct: 1242 GQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSG 1301
Query: 219 IPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP---GTPAICAYKRE 270
+PG GL G+ G+PG G G+ G G G RG+ G+ GVP G P I K E
Sbjct: 1302 LPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGE 1356
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 90/193 (46%), Gaps = 59/193 (30%)
Query: 112 PGLQGPIGQKGEIGAKGEM---GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
PGL+G G G GAKG++ G+ G+RGE G PGV G G GIPG +G+ G G G
Sbjct: 1306 PGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPGQ 1365
Query: 169 PGPQGIPGDEGKR------GPKGDMGYPGRIGLDG---------------RDGL------ 201
PG GIPG +G+ G KG+ G+PG G+ G RDGL
Sbjct: 1366 PGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGLPGLPGRDGLPGADGP 1425
Query: 202 --------------PGE---PGLDGIPGRNGMDGIPGKDGLP------------GKDGIP 232
PGE PGL G PG G G+PG DG P G DG P
Sbjct: 1426 VGPPGPSGPQNLVEPGEKGLPGLPGAPGLRGEKGMPGLDGPPGNDGPPGLPGQRGNDGYP 1485
Query: 233 GTNGTNGEKGMTG 245
G G +GEKGM G
Sbjct: 1486 GAPGLSGEKGMGG 1498
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PGL G G+ G G G G+KGE G G PG G G GIPG +G+ G PG
Sbjct: 1288 PGLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGK------RGEDGLPG- 1340
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
+PG +G+ G PG G G GLPG+PG GIPG G G+PG G G+ G
Sbjct: 1341 --VPGRDGQ------PGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGF 1392
Query: 232 PGTNGTNGEKG 242
PGT G G G
Sbjct: 1393 PGTPGVPGYAG 1403
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 70/147 (47%), Gaps = 18/147 (12%)
Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
G GV G G G PG G PG +G PG G PG G PG +G G KG+
Sbjct: 428 GAPGVSGPSGIPGLPGPKGEPGYRGTPGQS-------IPGLPGKDGKPGLDGAPGRKGEN 480
Query: 188 GYPGRIGLDGR--DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG---------TNG 236
G PG G G +GLPG PG G PG NG DG G +GLPG G G G
Sbjct: 481 GLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGRDGVNGLPGAPGTKGDRGGTCSACAPG 540
Query: 237 TNGEKGMTGPRGNRGKSGINGVPGTPA 263
T GEKG+ G G G G G+PG P
Sbjct: 541 TKGEKGLPGYSGQPGPQGDRGLPGMPG 567
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 85/186 (45%), Gaps = 39/186 (20%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERG------EKGAPGVVGPPGPQGIPGDEGKRGPKGD 165
PGL G G GE G G GV G G + G PGV G G G+PG G G KGD
Sbjct: 867 PGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGD 926
Query: 166 MGYPG---PQGIPGDEGKRGPKGDMGYPGRIGLDGR------------DGLPGEPGLDGI 210
+G PG G+PG G G KG+ G PG G G G PG PG+ G
Sbjct: 927 LGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNGPKGEPGVPGMPGT 986
Query: 211 PG------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGV 258
PG R+G+ G+PG G G +G+P GEKG GP G+ G G+
Sbjct: 987 PGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLP------GEKGEAGPAARDGQKGDAGL 1040
Query: 259 PGTPAI 264
PG P +
Sbjct: 1041 PGQPGL 1046
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 122 GEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKR 181
G G G G KG+RG+ G G GPPG G PG+ G +G GP+G PGD G
Sbjct: 182 GPSGRDGYPGEKGDRGDTGNAGPRGPPGEAGSPGNPG-------IGSIGPKGDPGDLGSV 234
Query: 182 GPKGDMG---YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
GP G G + G + G G PGE G G PG G G PG GL G+ G+PG G
Sbjct: 235 GPPGPPGPREFTGSGSIVGPRGNPGEKGDKGEPGEGGQRGYPGNGGLSGQPGLPGMKGEK 294
Query: 239 GEKGMTGPRGNRGKSGINGVPG 260
G G GPRG G+ G G PG
Sbjct: 295 GLSGPAGPRGKEGRPGNAGPPG 316
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 67/143 (46%), Gaps = 35/143 (24%)
Query: 114 LQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG--------PQGIPGDEGK------ 159
L GP G+ G G KG+ G G G +G PG G PG P+G PGD G
Sbjct: 180 LPGPSGRDGYPGEKGDRGDTGNAGPRGPPGEAGSPGNPGIGSIGPKGDPGDLGSVGPPGP 239
Query: 160 ------------RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLP---GE 204
GP+G+ G G +G PG+ G+R GYPG GL G+ GLP GE
Sbjct: 240 PGPREFTGSGSIVGPRGNPGEKGDKGEPGEGGQR------GYPGNGGLSGQPGLPGMKGE 293
Query: 205 PGLDGIPGRNGMDGIPGKDGLPG 227
GL G G G +G PG G PG
Sbjct: 294 KGLSGPAGPRGKEGRPGNAGPPG 316
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 84/169 (49%), Gaps = 30/169 (17%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
GL G G KGE G G GV G +G+ GAPG G PG +PG G G KG+ G PG
Sbjct: 901 GLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPG---LPGAPGYPGMKGNAGIPG-- 955
Query: 173 GIPG---------DEGKRGPKGDMGYPGRIGLDG------------RDGLPGEPGLDGIP 211
+PG G GPKG+ G PG G G RDGL G PG+ G
Sbjct: 956 -VPGFKGDGGLPGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDR 1014
Query: 212 GRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G NG+ G G+ G +DG G G G+ G+ RG +G SG+ GVPG
Sbjct: 1015 GFNGLPGEKGEAGPAARDGQKGDAGLPGQPGL---RGPQGPSGLPGVPG 1060
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 84/194 (43%), Gaps = 46/194 (23%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP------------PGPQGIPGDEGK 159
PGL G GQ G G G G G G+ G PG G PG QG+PG+
Sbjct: 660 PGLSGKPGQDGLPGLPGNKGEAG-YGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAP 718
Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------- 209
+ P P G PG G G KG+ GYPGR G G+ G PG PG+ G
Sbjct: 719 E----NQVNPAPPGQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGL 774
Query: 210 -----------IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR--------GNR 250
G G+ GIPG G G G+PG NG GE G+ P G +
Sbjct: 775 PGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLK 834
Query: 251 GKSGINGVPGTPAI 264
G +G+ G+PGTP +
Sbjct: 835 GDAGLPGLPGTPGL 848
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 148 PGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG--------PKGDMG----------- 188
PGP G G G++G +GD G GP+G PG+ G G PKGD G
Sbjct: 181 PGPSGRDGYPGEKGDRGDTGNAGPRGPPGEAGSPGNPGIGSIGPKGDPGDLGSVGPPGPP 240
Query: 189 ----YPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI---PGTNGTNGEK 241
+ G + G G PGE G G PG G + G PG G+ PG G GEK
Sbjct: 241 GPREFTGSGSIVGPRGNPGEKGDKGEPGEGG------QRGYPGNGGLSGQPGLPGMKGEK 294
Query: 242 GMTGPRGNRGKSGINGVPGTPAI 264
G++GP G RGK G G G P
Sbjct: 295 GLSGPAGPRGKEGRPGNAGPPGF 317
Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMG----- 167
GL G G KG+ G G +GEKG PG G PGPQG G G GP GD G
Sbjct: 519 GLPGAPGTKGDRGGTCSACAPGTKGEKGLPGYSGQPGPQGDRGLPGMPGPVGDAGDDGLP 578
Query: 168 ----------------YPGPQGIPGDEG-------KRGPKGDMGYPGRIGLDGRDGLPGE 204
+PG +PG +G + GP PG GL G +G PG+
Sbjct: 579 GPAGRPGSPGPPGQDGFPG---LPGQKGEPTQLTLRPGP------PGYPGLKGENGFPGQ 629
Query: 205 PGLDGIPG---------------RNGMDGIPGKDGLPGKDGIPGTNGTNGEKG 242
PG+DG+PG G G+PG G PG+DG+PG G GE G
Sbjct: 630 PGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPGLPGNKGEAG 682
>sp|P15988|CO6A2_CHICK Collagen alpha-2(VI) chain OS=Gallus gallus GN=COL6A2 PE=2 SV=1
Length = 1022
Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 128 GEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
G G KG RG+KGA G +G PG G+ G +G G +G +GYPGP+G+PG +G++G G
Sbjct: 256 GPAGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGVPGLKGEKGEIGSD 315
Query: 188 GYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPR 247
G G GL GR+G G+ G GR G G G G G DG PG G GE+G G +
Sbjct: 316 GRRGAAGLAGRNGTDGQ---KGKLGRIGPPGCKGDRGDKGPDGYPGDAGDQGERGDEGMK 372
Query: 248 GN 249
G+
Sbjct: 373 GD 374
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG +GP G GE+G KG G +G G +G G VG PG G GD G GP+GD G PGP
Sbjct: 447 PGPEGPRGLPGEVGNKGARGDQGLPGPRGPTGAVGEPGNIGSRGDPGDLGPRGDAGPPGP 506
Query: 172 QGIPGDEG-----KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
+G G G RGP+GD G G+ G G G G G G G G G PG G P
Sbjct: 507 KGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGGRGELGPKGTQGTKGEKGEPGDPGPRGEP 566
Query: 227 GKDGIPG 233
G G PG
Sbjct: 567 GTRGPPG 573
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Query: 122 GEIGAKGEMGVKGERGEKGAPGVV------GPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
G GA+G G KG +GE G PG G PG +G G G +G +GD G GP+G+P
Sbjct: 397 GNPGAQGPGGTKGRKGETGPPGPKGEPGRRGDPGTKGSKGGPGAKGERGDPGPEGPRGLP 456
Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
G+ G +G +GD G PG G G G PG G G PG G G G G G G PG +
Sbjct: 457 GEVGNKGARGDQGLPGPRGPTGAVGEPGNIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFS 516
Query: 236 --------GTNGEKGMTGPRGNRGKSGINGVPGT 261
G GEKG GP+G RG+ G G GT
Sbjct: 517 YPGPRGPQGDKGEKGQPGPKGGRGELGPKGTQGT 550
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 85/213 (39%), Gaps = 63/213 (29%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
P G +G G KG +G G G+KG +G+ G G +G PGP+G+PG +G++G G G G
Sbjct: 260 PKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGVPGLKGEKGEIGSDGRRG 319
Query: 171 PQGI------------------PGDEGKRGPKGDMGYPGRIGLDGRDG------------ 200
G+ PG +G RG KG GYPG G G G
Sbjct: 320 AAGLAGRNGTDGQKGKLGRIGPPGCKGDRGDKGPDGYPGDAGDQGERGDEGMKGDPGRPG 379
Query: 201 ---------------LPGEPGLDGIPG------------------RNGMDGIPGKDGLPG 227
+PG PG G G R G G G G PG
Sbjct: 380 RSGPPGPPGEKGSPGIPGNPGAQGPGGTKGRKGETGPPGPKGEPGRRGDPGTKGSKGGPG 439
Query: 228 KDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G G G +G+ G GN+G G G+PG
Sbjct: 440 AKGERGDPGPEGPRGLPGEVGNKGARGDQGLPG 472
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 78/194 (40%), Gaps = 51/194 (26%)
Query: 112 PGLQGPIG------------QKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK 159
PG++GPIG +KGEIG+ G G G G G G G G G PG +G
Sbjct: 288 PGIEGPIGYPGPKGVPGLKGEKGEIGSDGRRGAAGLAGRNGTDGQKGKLGRIGPPGCKGD 347
Query: 160 RGPKGDMGYPGPQGIPGDEGKRGPKGDM---------------------GYPGRIGLDG- 197
RG KG GYPG G G+ G G KGD G PG G G
Sbjct: 348 RGDKGPDGYPGDAGDQGERGDEGMKGDPGRPGRSGPPGPPGEKGSPGIPGNPGAQGPGGT 407
Query: 198 -----------------RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
R G PG G G PG G G PG +G G G G G G+
Sbjct: 408 KGRKGETGPPGPKGEPGRRGDPGTKGSKGGPGAKGERGDPGPEGPRGLPGEVGNKGARGD 467
Query: 241 KGMTGPRGNRGKSG 254
+G+ GPRG G G
Sbjct: 468 QGLPGPRGPTGAVG 481
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 80/191 (41%), Gaps = 39/191 (20%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPK--------- 163
G G GQKG++G G G KG+RG+KG G G G QG GDEG +G
Sbjct: 325 GRNGTDGQKGKLGRIGPPGCKGDRGDKGPDGYPGDAGDQGERGDEGMKGDPGRPGRSGPP 384
Query: 164 ------------GDMGYPGPQGIPGDEG------------KRGPKGDMGYPGRIGLDGRD 199
G+ G GP G G +G +RG G G G G G
Sbjct: 385 GPPGEKGSPGIPGNPGAQGPGGTKGRKGETGPPGPKGEPGRRGDPGTKGSKGGPGAKGER 444
Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTNGEKGMTGPRGNRGKS 253
G PG G G+PG G G G GLPG G PG G+ G+ G GPRG+ G
Sbjct: 445 GDPGPEGPRGLPGEVGNKGARGDQGLPGPRGPTGAVGEPGNIGSRGDPGDLGPRGDAGPP 504
Query: 254 GINGVPGTPAI 264
G G G P
Sbjct: 505 GPKGDRGRPGF 515
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVV--GPPGPQGIPGDEGKRGPKGDMGYP 169
PG G G G++G +G+ G G +G++G PG GP GPQG G++G+ GPKG G
Sbjct: 483 PGNIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGGRGEL 542
Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE 204
GP+G G +G++G GD PG G G G PGE
Sbjct: 543 GPKGTQGTKGEKGEPGD---PGPRGEPGTRGPPGE 574
Score = 41.2 bits (95), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 15/85 (17%)
Query: 182 GPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEK 241
GP G GY G+ G G G PG PGL G R G GI G G PG G+PG
Sbjct: 256 GPAGPKGYRGQKGAKGNMGEPGSPGLKG---RQGDPGIEGPIGYPGPKGVPGL------- 305
Query: 242 GMTGPRGNRGKSGINGVPGTPAICA 266
+G +G+ G +G G +
Sbjct: 306 -----KGEKGEIGSDGRRGAAGLAG 325
>sp|P12105|CO3A1_CHICK Collagen alpha-1(III) chain (Fragments) OS=Gallus gallus GN=COL3A1
PE=2 SV=2
Length = 1262
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 86/179 (48%), Gaps = 42/179 (23%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG +G G+ G+ GAKG+ G KGERGE G PG GP PG+EGKRG G+ PG
Sbjct: 424 PGAKGTPGEPGKNGAKGDPGPKGERGENGTPGARGP------PGEEGKRGANGE---PGQ 474
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGE---------------PGLDGIPGRNGM 216
G+PG G+RG G G PG GL G G GE G DG PG GM
Sbjct: 475 NGVPGTPGERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGPAGDRGQDGGPGLPGM 534
Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEK------------------GMTGPRGNRGKSGING 257
G+PG G PG DG PG G GE G GP+GN G G NG
Sbjct: 535 RGLPGIPGSPGSDGKPGPPGNQGEPGRSGPPGPAGPRGQPGVMGFPGPKGNEGAPGKNG 593
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 67/142 (47%), Gaps = 33/142 (23%)
Query: 137 GEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLD 196
G GA G G PG G GD G +G +G+ G PG +G PG+EGKRG G
Sbjct: 422 GNPGAKGTPGEPGKNGAKGDPGPKGERGENGTPGARGPPGEEGKRGANG----------- 470
Query: 197 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE---------------K 241
EPG +G+PG G G PG GLPG +G+PG G GE +
Sbjct: 471 -------EPGQNGVPGTPGERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGPAGDR 523
Query: 242 GMTGPRGNRGKSGINGVPGTPA 263
G G G G G+ G+PG+P
Sbjct: 524 GQDGGPGLPGMRGLPGIPGSPG 545
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 179 GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
G GP G G PGR G +G G+PG PG G PG M G+PG G G D G +G
Sbjct: 221 GPAGPPGKDGEPGRPGRNGDRGIPGLPGHKGHPG---MPGMPGMKGARGFD---GKDGAK 274
Query: 239 GEKGMTGPRGNRGKSGIN 256
G+ G GP+G G+ G N
Sbjct: 275 GDSGAPGPKGEAGQPGAN 292
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 21/102 (20%)
Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP 226
G PG +G PG+ GK G KGD G G G +G PG G P
Sbjct: 422 GNPGAKGTPGEPGKNGAKGD---------------------PGPKGERGENGTPGARGPP 460
Query: 227 GKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYK 268
G++G G NG G+ G+ G G RG G G+PG+ + K
Sbjct: 461 GEEGKRGANGEPGQNGVPGTPGERGSPGFRGLPGSNGLPGEK 502
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
P G G G+ G G G+ G+ G G KG PG+ G PG +G G +GK G KGD G PG
Sbjct: 222 PAGPPGKDGEPGRPGRNGDRGIPGLPGHKGHPGMPGMPGMKGARGFDGKDGAKGDSGAPG 281
Query: 171 PQGIPGDEG 179
P+G G G
Sbjct: 282 PKGEAGQPG 290
Score = 42.0 bits (97), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL 225
+G GP G G+ G+ G GD G PG G G G+PG PG+ G G +G DG G G
Sbjct: 220 IGPAGPPGKDGEPGRPGRNGDRGIPGLPGHKGHPGMPGMPGMKGARGFDGKDGAKGDSGA 279
Query: 226 PG---KDGIPGTNGT 237
PG + G PG NG+
Sbjct: 280 PGPKGEAGQPGANGS 294
Score = 38.1 bits (87), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 151 QGIPGDEGKRG---PKGDMGYPGPQGIPGDEGKRGP------------------KGDMGY 189
QG+PG+ G G PKGD G PG +G G G RG KG+ G
Sbjct: 724 QGMPGERGASGSPGPKGDKGEPGGKGADGLPGARGERGNVGPIGPPGPAGPPGDKGETGP 783
Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGE 240
G G G G PGE G G+PG G G PG++G PG G G G GE
Sbjct: 784 AGAPGPAGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGLRGE 834
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 224 GLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSLLPNSETSQL 283
G PG G PG G NG KG GP+G RG++G G G P E N E Q
Sbjct: 422 GNPGAKGTPGEPGKNGAKGDPGPKGERGENGTPGARGPPG------EEGKRGANGEPGQN 475
Query: 284 LIPPT 288
+P T
Sbjct: 476 GVPGT 480
Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 42/100 (42%), Gaps = 27/100 (27%)
Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG 203
++GP GP G G+ G+ G GD G PG +PG KG G P
Sbjct: 219 MIGPAGPPGKDGEPGRPGRNGDRGIPG---LPGH------KGHPGMP------------- 256
Query: 204 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGM 243
G+PG G G GKDG G G PG G G+ G
Sbjct: 257 -----GMPGMKGARGFDGKDGAKGDSGAPGPKGEAGQPGA 291
>sp|Q3U962|CO5A2_MOUSE Collagen alpha-2(V) chain OS=Mus musculus GN=Col5a2 PE=1 SV=1
Length = 1497
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
+ +G E P G+QGPIG GE +G+RG +G PG VGPPGP G G
Sbjct: 470 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPMGERG 520
Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
G RG G G PGP+G G+ G +G +GD G PG GL G GL G PG+ G
Sbjct: 521 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQG 580
Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
G+ G G PG+DG PG G G G G G+ GP+G+ G++G GVPG
Sbjct: 581 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPG 637
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIP--- 154
M+G T P G QG G+ G G G G+ G G G PG GP G G
Sbjct: 382 GMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPP 441
Query: 155 ---------------GDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRD 199
G +G RG GD G PG +G G +G+ GP G G G G +G+
Sbjct: 442 GLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKR 501
Query: 200 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVP 259
G G+PG G PG G G PG G PG DG+PG G GE+G G G +G G G P
Sbjct: 502 GPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRP 561
Query: 260 GTPAICAYK 268
G P + +
Sbjct: 562 GEPGLPGAR 570
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 88/170 (51%), Gaps = 22/170 (12%)
Query: 128 GEMGVKGERGEKGAPGV---VGP---PGPQGI------PGDEGKRGPKGDMGYPGPQGIP 175
G G++G+ G+ G PG GP PGP GI PG+EGKRGP+GD G GP P
Sbjct: 457 GPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 513
Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
G G+RG G+ G+PG GL G G GE G G G G G PG+ PG+ G+PG
Sbjct: 514 GPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR---PGEPGLPGAR 570
Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
G G G+ GP G G G +G PG P + + S+ LP + S
Sbjct: 571 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 620
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 86/165 (52%), Gaps = 9/165 (5%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGY--P- 169
G G G +G GA G G+KG RG KG + GP G G PG +G+ GP G MG P
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGHKG---LEGPKGEIGAPGAKGEAGPTGPMGAMGPL 333
Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 229
GP+G+PG+ G+ GP+ G PG+ G G G PG G GIPG +G G PG G G
Sbjct: 334 GPRGMPGERGRLGPQ---GAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPT 390
Query: 230 GIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPAICAYKRESCSL 274
G G G G++G TGP G G G+ G GT K + S
Sbjct: 391 GARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSA 435
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
G+ G G GE+G G G +G PG G PG +G G +G GPKG++G PG +G G
Sbjct: 265 GEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPT 324
Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
G GP G G PG G G G PG+ G G+PG+ G M GIPG G PG G+
Sbjct: 325 GPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 384
Query: 233 GTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
G G G +G GP+G RG++G G G+
Sbjct: 385 GEAGPTGARGPEGPQGQRGETGPPGPAGS 413
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 75/161 (46%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR 160
GF S PG G G KG G KG G KGE G GA G GP GP G G G R
Sbjct: 277 GFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPR 336
Query: 161 GPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP 220
G G+ G GPQG PG G G G G G +G+ G G PG PG+ G G G G
Sbjct: 337 GMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPE 396
Query: 221 GKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
G G G+ G PG G+ G G G G G G G GT
Sbjct: 397 GPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGT 437
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 92/173 (53%), Gaps = 18/173 (10%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
G + + PPGLQG G++G G G G +G GEKGA G G G +
Sbjct: 745 GPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 804
Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
G G++G+ GP+G +G PG +G PG G+ GP G +G+ G G DG+ G+ GEPG
Sbjct: 805 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 863
Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
PG+ G G PG GL G PG +G +G G+ G RG +G G G PG+
Sbjct: 864 --PGQKGDAGSPGPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGS 911
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)
Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
G +G +G+ G+RGE+G PG+ PGP G P GK GP G
Sbjct: 987 TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1040
Query: 166 MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
+G PGP+ G PG +G G +GD G PG GL G G PG PG G PG G G
Sbjct: 1041 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGE 1100
Query: 220 PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
PG G GK G+PG G G+KG G RG+RG+ G G
Sbjct: 1101 PGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRG 1144
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 91/189 (48%), Gaps = 30/189 (15%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGKRGPKGDMGY 168
PG+QGP G+ G +GA GE G G G +G PG +G PGP+G GD GK G G+ G
Sbjct: 576 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGV 635
Query: 169 PGPQGIPGDEGKR------------GPKGDMGYPGRIGLDGR---------------DGL 201
PG +G PG +G+ G +G+ G PG G G G+
Sbjct: 636 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGV 695
Query: 202 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
PGEPG G G G G PG+ G PG G+PG G G G GP+GN G +G G G
Sbjct: 696 PGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGP 755
Query: 262 PAICAYKRE 270
P + E
Sbjct: 756 PGLQGMPGE 764
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 100/238 (42%), Gaps = 69/238 (28%)
Query: 98 AMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPG---PQGIP 154
+ G + E P G GP G +G+ G GE G+ G RG G PGV GP G P G P
Sbjct: 532 GLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 591
Query: 155 GDEGKRGPKGD---------MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDG----- 200
G++G+ GP G MG PGP+G GD GK G G+ G PG+ G G+DG
Sbjct: 592 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPS 651
Query: 201 -------------------------------------------LPGEPGLDGIPGRNGMD 217
+PGEPG G G G
Sbjct: 652 GPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGER 711
Query: 218 GIPGK------DGLPGKDGIPGTNGTNGEKGMTGPR---GNRGKSGINGVPGTPAICA 266
G PG+ GLPG+ G+ G +G +G KG GP G+ G G+ G+PG I
Sbjct: 712 GNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAG 769
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 91/179 (50%), Gaps = 30/179 (16%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
PGL+G G KG G KGE+G G +GE G P G +GP GP+G+PG+ G+ GP+G G
Sbjct: 294 PGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGK 353
Query: 169 PGPQGIPGDEGKRGP---KGDMGYPGRIGLDGRDGL------------------PGEPGL 207
G G+PG G GP G G+PG G+ G G PG G
Sbjct: 354 RGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGS 413
Query: 208 DGIPGRNGMDGIPGKDGLPGKDGI------PGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G+PG G DG PG G G G G G+ G +G TGP+G RG+SG GVPG
Sbjct: 414 QGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPG 472
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 79/179 (44%), Gaps = 36/179 (20%)
Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD---------EGKRGPKGDM 166
GP G GE G G G G+RG G PG GP GP GIPG +G+ GP G
Sbjct: 334 GPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGAR 393
Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPG----------------------- 203
G GPQG G+ G GP G G PG +G DG G G
Sbjct: 394 GPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQ 453
Query: 204 -EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
G GI G++G G+PG G G G PG +G +G GP G GK G G PGT
Sbjct: 454 GSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGI---QGPIGPPGEEGKRGPRGDPGT 509
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 88/190 (46%), Gaps = 39/190 (20%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKR---------- 160
PPG G GQ G +G G G G+ G+ G G G PG +G PG +G+
Sbjct: 599 PPGSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 658
Query: 161 --GPKGDMGYPGP---------------------QGIPGDEGK---RGPKGDMGYPGRIG 194
G +G+ G PGP QG+PG+ G GP+G+ G PG G
Sbjct: 659 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERG 718
Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT---GPRGNRG 251
G GLPGE G+ G G +G G PG G G G PG G GE+G+ GP+G+RG
Sbjct: 719 EPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRG 778
Query: 252 KSGINGVPGT 261
G G GT
Sbjct: 779 GIGEKGAEGT 788
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
PG GP+G +GE G +GE G+ G GEKG G GP GP+G PG G GP G
Sbjct: 699 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGL 758
Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
G PG +GI G G +G +G +G G G G DG G G G PG
Sbjct: 759 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 818
Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G+ G PG G PG G NG G G GP+G G+ G+ G PG P
Sbjct: 819 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 865
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 82/187 (43%), Gaps = 48/187 (25%)
Query: 122 GEIGAKGEMGVKGERG---EKGAPGVVGPPGPQGIPGDEGKRGPKG---------DMGYP 169
GE GA G +G +GERG E+G PG+ G PG +G+ G G GPKG D G P
Sbjct: 697 GEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPP 756
Query: 170 GPQGIPGDEG---KRGPKGDMGYPGRIGLDGRDG-------------------------- 200
G QG+PG+ G GPKGD G G G +G G
Sbjct: 757 GLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEP 816
Query: 201 ----LPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTNGEKGMTGPRGNRGKS 253
L G PG G PG G +G G G G DG PG G GE G G G+ G
Sbjct: 817 GPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQ 876
Query: 254 GINGVPG 260
G+ G PG
Sbjct: 877 GLAGSPG 883
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 70/148 (47%), Gaps = 27/148 (18%)
Query: 135 ERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIG 194
++G G PG VGP GP+G G+ G+RG G G PG +G+ G G GPKG+ G G IG
Sbjct: 692 DQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIG 751
Query: 195 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNG--------------- 239
G PGL G+PG G+ G PG G G G G GT G
Sbjct: 752 DT------GPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPG 805
Query: 240 ------EKGMTGPRGNRGKSGINGVPGT 261
EKG GPRG G G G PG+
Sbjct: 806 PAGPTGEKGEPGPRGLVGPPGSRGNPGS 833
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 82/205 (40%), Gaps = 48/205 (23%)
Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
PG GP+G +G G G
Sbjct: 210 PGSVGPVGPRGPQGLQGQQGGVGPAGPPGEPGEPGPMGPIGSRGPEGPPGKPGEDGEPGR 269
Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
G GE G G+PG G PG G+PG +G RG KG G G G PG +G+ GP G MG
Sbjct: 270 NGNTGEVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGA 329
Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
G +G G G G G G PG+ G G+PGK G+PG G PG G GE G
Sbjct: 330 MGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 389
Query: 244 TGPRGNRGKSGINGVPGTPAICAYK 268
TG RG G G G G P +
Sbjct: 390 TGARGPEGPQGQRGETGPPGPAGSQ 414
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
G GP G G G++G G +GE G GA G GP GP G PG + G+ G KGD G P
Sbjct: 814 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 873
Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGR 213
GPQG+ G GP G G PG G G G PG G G GR
Sbjct: 874 GPQGL---AGSPGPHGPHGVPGLKGGRGTQGPPGATGFPGSAGR 914
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 65/140 (46%), Gaps = 39/140 (27%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG +GP G G G G +G +G+RG+ PGP G+PG +G G PGP
Sbjct: 1044 PGPEGPAGNDGTPGRDGAVGERGDRGD---------PGPAGLPGSQGA------PGTPGP 1088
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
G PGD G+R G PG G G PGR GK GLPG G
Sbjct: 1089 VGAPGDAGQR------------------GEPGSRGPVGPPGRA------GKRGLPGPQGP 1124
Query: 232 PGTNGTNGEKGMTGPRGNRG 251
G G NG++G G +G+RG
Sbjct: 1125 RGDKGDNGDRGDRGQKGHRG 1144
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG G +G++G+ G G G+ G +G G PG VG PG G G+ G RGP G G G
Sbjct: 1056 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGEPGSRGPVGPPGRAGK 1115
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
+G+PG +G RG KGD G G G G G
Sbjct: 1116 RGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1145
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 81/198 (40%), Gaps = 63/198 (31%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
PPG +G G +GE G G +G G +G G PGV G PG G GD G GP+G G PG
Sbjct: 824 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 883
Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIGL---------------------DGRDGLPG 203
P G +PG +G RG P G G+PG G +G GL G
Sbjct: 884 PHGPHGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPAGEPGKEGPPGLRG 943
Query: 204 EPGLDG------------------------------------IPGRNGMDGIPGKDGLPG 227
+PG G G+ G+ G+PG+ G G
Sbjct: 944 DPGSHGRVGDRGPAGPPGSPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERG 1003
Query: 228 KDGIPGTNGTNGEKGMTG 245
G+PG GT G+ G TG
Sbjct: 1004 MPGLPGPAGTPGKVGPTG 1021
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 87/233 (37%), Gaps = 84/233 (36%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
G QGP GQ G G GE G KG+ G G G+ G PGP G G G +G +G G PG
Sbjct: 847 GPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHGVPGLKGGRGTQGPPGAT 906
Query: 173 GIPGDEG---------------------KRGP---KGDMGYPGRI--------------- 193
G PG G K GP +GD G GR+
Sbjct: 907 GFPGSAGRVGPPGPAGAPGPAGPAGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGSPGDK 966
Query: 194 GLDGRD---------------------GLPGEPGLDGIPGRNGMDGIPGKDGL------- 225
G G D G+PG+ G G+PG G G PGK G
Sbjct: 967 GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 1026
Query: 226 -----------------PGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
PG +G G +GT G G G RG+RG G G+PG+
Sbjct: 1027 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGS 1079
>sp|P02463|CO4A1_MOUSE Collagen alpha-1(IV) chain OS=Mus musculus GN=Col4a1 PE=2 SV=4
Length = 1669
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 104/202 (51%), Gaps = 34/202 (16%)
Query: 97 VAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGV--VGPPGPQG-- 152
V G S E PG+ G +G G+ GE G KGE+G+ G PG+ G PG +G
Sbjct: 1013 VGGMGLPGSPGEKGVPGIPG---SQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQ 1069
Query: 153 ----IPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
PG G++G KG G PG +PG G RG G++G+PG GL G G G PGLD
Sbjct: 1070 GLAGFPGSPGEKGEKGSAGTPG---MPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLD 1126
Query: 209 GIPGRNGMDGIPG---------KDGLPGKDGIPGTNGTNGEKGMT-----------GPRG 248
G+PG G G+PG + G PG DGIPG+ G GE+G+ G +G
Sbjct: 1127 GVPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFPGFPGSKGDKG 1186
Query: 249 NRGKSGINGVPGTPAICAYKRE 270
++G+ G G+ G+P I K E
Sbjct: 1187 SKGEVGFPGLAGSPGIPGVKGE 1208
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 86/154 (55%), Gaps = 13/154 (8%)
Query: 119 GQKGEIGAKGEMGV---KGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
GQKG+ G KG++G KG RG+ G PGV PG G G G+ GPKGD G G G P
Sbjct: 948 GQKGDQGEKGQIGPTGDKGSRGDPGTPGV---PGKDGQAGHPGQPGPKGDPGLSGTPGSP 1004
Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
G G +G G MG PG G G G+PG G+ G PG G G G+ GLPG GIPG
Sbjct: 1005 GLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGI-GIPGRP 1063
Query: 236 GTNGEKGMT------GPRGNRGKSGINGVPGTPA 263
G G++G+ G +G +G +G G+PG+P
Sbjct: 1064 GDKGDQGLAGFPGSPGEKGEKGSAGTPGMPGSPG 1097
Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 91/164 (55%), Gaps = 18/164 (10%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEG---KRGPKGDMGY 168
PG QG G G G+KGEMGV G G+ G+PG G PG G GD G GP+GD G+
Sbjct: 863 PGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGF 922
Query: 169 PGPQG---IPGDEGK---------RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGM 216
G +G +PG G +G KGD G G+IG G G G+PG G+PG++G
Sbjct: 923 KGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQ 982
Query: 217 DGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G PG+ PG G PG +GT G G+ GP+G+ G G+ G PG
Sbjct: 983 AGHPGQ---PGPKGDPGLSGTPGSPGLPGPKGSVGGMGLPGSPG 1023
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 85/171 (49%), Gaps = 26/171 (15%)
Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP---PGPQGIPGDEGKRGPKGDM------ 166
GP G KG G G GV G+ G+ G PG GP PG G PG G GPKG +
Sbjct: 960 GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGPKGSVGGMGLP 1019
Query: 167 ---------GYPGPQGIPGDEGKRGPKGD--------MGYPGRIGLDGRDGLPGEPGLDG 209
G PG QG+PG G++G KG+ +G PGR G G GL G PG G
Sbjct: 1020 GSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPG 1079
Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPG 260
G G G PG G PG G PG G G G+ G +G++G G++GVPG
Sbjct: 1080 EKGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLDGVPG 1130
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 75/137 (54%), Gaps = 16/137 (11%)
Query: 144 VVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGD--MGYPGRIGLDGRDGL 201
+ GPPG G+PG G GP+GD G+PG G PG G++G G +G+PG G G DGL
Sbjct: 644 LPGPPGAAGLPGSPGFPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGL 703
Query: 202 PGEPGLDGIPGRNGMDGIPGK--------------DGLPGKDGIPGTNGTNGEKGMTGPR 247
PGE G G PGR G +G+PG GL G+ G+PG GT GEKG G
Sbjct: 704 PGEIGRPGSPGRPGFNGLPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGP 763
Query: 248 GNRGKSGINGVPGTPAI 264
G G+ G+ G PG I
Sbjct: 764 GVPGEQGLTGPPGLQGI 780
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 84/175 (48%), Gaps = 23/175 (13%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---------------- 155
PG GP G G G KG+ G+ G G +G PG G G G+PG
Sbjct: 890 PGSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQ 949
Query: 156 --DEGKRG---PKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGI 210
D+G++G P GD G G G PG GK G G G PG G G G PG PGL G
Sbjct: 950 KGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGP 1009
Query: 211 PGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGIN--GVPGTPA 263
G G G+PG G G GIPG+ G G G G +G +G+SG+ G+PG P
Sbjct: 1010 KGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPG 1064
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 72/148 (48%), Gaps = 24/148 (16%)
Query: 131 GVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYP 190
G KG++G +G PG+ G G G+PG +G PG G PG +G+ G G G P
Sbjct: 840 GPKGDKGSQGLPGLTGQSGLPGLPGQQG---------TPGVPGFPGSKGEMGVMGTPGQP 890
Query: 191 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT------------- 237
G G G GLPGE G G+PG +G G PG G G G+PG G+
Sbjct: 891 GSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQK 950
Query: 238 --NGEKGMTGPRGNRGKSGINGVPGTPA 263
GEKG GP G++G G G PG P
Sbjct: 951 GDQGEKGQIGPTGDKGSRGDPGTPGVPG 978
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 87/207 (42%), Gaps = 65/207 (31%)
Query: 112 PGLQGPIGQKGEIG-----AKGEMGVKG------ERGEKGAPGV------VGPPGPQGIP 154
PG GP GQKGE G KG+ G+ G E+G G PGV GPPG QGI
Sbjct: 722 PGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGIR 781
Query: 155 GDEGKRGP-----------------------------------KGDMGYPGPQGIPGDEG 179
GD G G KG+ G+P G PG +
Sbjct: 782 GDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFP---GFPGLD- 837
Query: 180 KRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIP---------GRNGMDGIPGKDGLPGKDG 230
GPKGD G G GL G+ GLPG PG G P G G+ G PG+ G PG G
Sbjct: 838 MPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAG 897
Query: 231 IPGTNGTNGEKGMTGPRGNRGKSGING 257
PG G G+ G+ G G RG G G
Sbjct: 898 TPGLPGEKGDHGLPGSSGPRGDPGFKG 924
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 82/195 (42%), Gaps = 50/195 (25%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG G G G G KGE G+ G PG+ G PG GIPG G++G G G PG
Sbjct: 716 PGFNGLPGNPGPQGQKGEPGI-------GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGE 768
Query: 172 QGIPGDEGKRGPKGDMGYPG--------------------------------RIGLDGRD 199
QG+ G G +G +GD G PG G+ G
Sbjct: 769 QGLTGPPGLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEK 828
Query: 200 GLPGEPGLD-----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRG 248
G PG PGLD G+PG G G+PG G G G+PG G+ GE G+ G G
Sbjct: 829 GFPGFPGLDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPG 888
Query: 249 NRGKSGINGVPGTPA 263
G G G PG P
Sbjct: 889 QPGSPGPAGTPGLPG 903
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 93/225 (41%), Gaps = 67/225 (29%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGP--PGPQGIPGDEGKRGPKGDMGYP 169
PG GP G +G G G G+ GE+G G PG+ P PGP+G+ G G+ G G G P
Sbjct: 657 PGFPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGLPGEIGRPGSPGRP 716
Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG---------IPGRNGMDGIP 220
G G+PG+ G +G KG+ G G GL G+ GLPG PG G +PG G+ G P
Sbjct: 717 GFNGLPGNPGPQGQKGEPGI-GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPP 775
Query: 221 GKDGLPGKDGIPGTNGT--------------------------------NGEKG------ 242
G G+ G G PG G GEKG
Sbjct: 776 GLQGIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFPGFPG 835
Query: 243 --MTGPRGNRGKSGI---------------NGVPGTPAICAYKRE 270
M GP+G++G G+ G PG P K E
Sbjct: 836 LDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGE 880
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 75/157 (47%), Gaps = 38/157 (24%)
Query: 127 KGEMG--VKGERGEKGAPGVVGPPGPQGIPGDE-----------GKRGPKGDMGYPGPQG 173
KG+MG +G +G+KG GV GPPG +PG G++G KG+ G+PG
Sbjct: 217 KGQMGSSFQGPKGDKGEQGVSGPPG---VPGQAQVKEKGDFAPTGEKGQKGEPGFPG--- 270
Query: 174 IPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 233
+PG G+ G PG+ G G+ PG DG G G GIPG G PG G G
Sbjct: 271 VPG-------YGEKGEPGKQGPRGK------PGKDGEKGERGSPGIPGDSGYPGLPGRQG 317
Query: 234 TNGTNGEKGMTGPRGN------RGKSGINGVPGTPAI 264
G GE G+ GP G G+ G G PG P +
Sbjct: 318 PQGEKGEAGLPGPPGTVIGTMPLGEKGDRGYPGAPGL 354
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%)
Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
G+ G+ G +G+ G GE+GE+G+PG+ G G G+PG +G +G KG+ G PGP G
Sbjct: 278 GEPGKQGPRGKPGKDGEKGERGSPGIPGDSGYPGLPGRQGPQGEKGEAGLPGPPGTVIGT 337
Query: 179 GKRGPKGDMGYPGRIGLDGRDG 200
G KGD GYPG GL G G
Sbjct: 338 MPLGEKGDRGYPGAPGLRGEPG 359
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 60/123 (48%), Gaps = 28/123 (22%)
Query: 123 EIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRG 182
EIG G+ G KG+RG +PG +G G PGPQG PG G+ G
Sbjct: 487 EIGFPGQPGAKGDRG---------------LPGRDGLEG------LPGPQGSPGLIGQPG 525
Query: 183 PKGDMGYPGRIGLD----GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTN 238
KG+ PG I D G G PG PG G+PGR G G G GLPG G PG+ G
Sbjct: 526 AKGE---PGEIFFDMRLKGDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGLK 582
Query: 239 GEK 241
GE+
Sbjct: 583 GER 585
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 85/196 (43%), Gaps = 69/196 (35%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG- 170
PG GP GQKGE G+ G G GE+GE+G PG P G PG +G +G KG++G+PG
Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFP----GFPGSKGDKGSKGEVGFPGL 1196
Query: 171 --PQGIPGDEGKRG-----------------------PKGDMGYP--------------- 190
GIPG +G++G PKGD G
Sbjct: 1197 AGSPGIPGVKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPP 1256
Query: 191 ------GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMT 244
G G G G PG PG +PG G PG G+PG G+ G+T
Sbjct: 1257 GFPGINGPKGDKGNQGWPGAPG------------VPGPKGDPGFQGMPGIGGS---PGIT 1301
Query: 245 GPRGNRGKSGINGVPG 260
G++G G+ GVPG
Sbjct: 1302 ---GSKGDMGLPGVPG 1314
Score = 38.1 bits (87), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Query: 131 GVKGERGEKGAP---GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDM 187
GVKG++GE+G P GV+G PG QG G G G KGD G P G+PG +G RGP G
Sbjct: 43 GVKGQKGERGLPGLQGVIGFPGMQGPEGPHGPPGQKGDAGEP---GLPGTKGTRGPPGAA 99
Query: 188 GYPGRIGL 195
GYPG GL
Sbjct: 100 GYPGNPGL 107
Score = 34.7 bits (78), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 51/107 (47%), Gaps = 21/107 (19%)
Query: 131 GVKGERGEKGAP------------------GVVGPPGPQGIPGDEGKRGPKGDMGYPGPQ 172
G KG+RG +G P G G G QG PG G GPKGD G+ G
Sbjct: 1233 GPKGDRGPQGQPGLPGHPGPMGPPGFPGINGPKGDKGNQGWPGAPGVPGPKGDPGFQGMP 1292
Query: 173 GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
GI G G G KGDMG PG G G+ GL PGL G+ G G G+
Sbjct: 1293 GIGGSPGITGSKGDMGLPGVPGFQGQKGL---PGLQGVKGDQGDQGV 1336
>sp|P05997|CO5A2_HUMAN Collagen alpha-2(V) chain OS=Homo sapiens GN=COL5A2 PE=1 SV=3
Length = 1499
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 96 LVAMQGFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG 155
+ +G E P G+QGPIG GE +G+RG +G PG VGPPGP G G
Sbjct: 472 VPGFKGEAGPKGEPGPHGIQGPIGPPGE---------EGKRGPRGDPGTVGPPGPVGERG 522
Query: 156 DEGKRGPKGDMGYPGPQGIPGDE------GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDG 209
G RG G G PGP+G G+ G +G +GD G PG GL G GL G PG+ G
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582
Query: 210 IPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNR------GKSGINGVPG 260
G+ G G PG+DG PG G G G G G+ GP+G+ G++G GVPG
Sbjct: 583 PEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPG 639
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 10/170 (5%)
Query: 116 GPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIP 175
GP G +G+ G G G KGE G KG PG G GP G PG+EGKRGP+GD G GP P
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGP---P 515
Query: 176 GDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 235
G G+RG G+ G+PG GL G G GE G G G G G PG+ PG+ G+PG
Sbjct: 516 GPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGR---PGEPGLPGAR 572
Query: 236 GTNGEKGMTGPRGN---RGKSGINGVPGTPAICAYKRESCSL-LPNSETS 281
G G G+ GP G G G +G PG P + + S+ LP + S
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGS 622
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 92/173 (53%), Gaps = 18/173 (10%)
Query: 101 GFCNSTKEYCPPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQ--------- 151
G + + PPGLQG G++G G G G +G GEKGA G G G +
Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP 806
Query: 152 ---GIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLD 208
G G++G+ GP+G +G PG +G PG G+ GP G +G+ G G DG+ G+ GEPG
Sbjct: 807 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE- 865
Query: 209 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGT 261
PG+ G G PG GL G PG +G NG G+ G RG +G G G PG+
Sbjct: 866 --PGQKGDAGSPGPQGL---AGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 94/213 (44%), Gaps = 63/213 (29%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGE---KGAPGVVGPPGPQGIPGDEGK--------- 159
PG+QGP G+ G +GA GE G G G +G PG +G PGP+G GD GK
Sbjct: 578 PGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637
Query: 160 ------------------------RGPKGDMGYPGP---------------------QGI 174
G +G+ G PGP QG+
Sbjct: 638 PGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGV 697
Query: 175 PGDEGK---RGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 231
PGD G GP+G+ G PG G G GLPGE G+ G G +G G PG G PG G
Sbjct: 698 PGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGP 757
Query: 232 PGTNGTNGEKGMT---GPRGNRGKSGINGVPGT 261
PG G GE+G+ GP+G+RG G G GT
Sbjct: 758 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGT 790
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
Query: 119 GQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDE 178
G+ G G GE+G G G +G PG G PG +G G +G GPKG++G PG +G G
Sbjct: 267 GEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPT 326
Query: 179 ---GKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-MD--GIPGKDGLPGKDGIP 232
G GP G G PG G G G PG+ G G+PG+ G M GIPG G PG G+
Sbjct: 327 GPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMK 386
Query: 233 GTNGTNGEKGMTGPRGNRGKS 253
G G G +G GP+G RG++
Sbjct: 387 GEAGPTGARGPEGPQGQRGET 407
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 80/164 (48%), Gaps = 36/164 (21%)
Query: 124 IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKG------------------D 165
G +G +G+ G+RGE+G PG+ PGP G P GK GP G
Sbjct: 989 TGQRGIVGMPGQRGERGMPGL---PGPAGTP---GKVGPTGATGDKGPPGPVGPPGSNGP 1042
Query: 166 MGYPGPQ------GIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGI 219
+G PGP+ G PG +G G +GD G PG GL G G PG PG G PG G G
Sbjct: 1043 VGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGD 1102
Query: 220 PGK------DGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGING 257
PG G GK G+PG G G+KG G RG+RG+ G G
Sbjct: 1103 PGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGD------EGKRGPKGDM 166
GL GP G +GE G G G KG +G+ G PG G PG +G+ G+ EGK GP G
Sbjct: 534 GLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAP 593
Query: 167 GYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 224
G G G PG G RG G MG PG G G G PGE G G+PG+ G PGKDG
Sbjct: 594 GEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---GAPGKDG 648
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 112 PGLQGPIGQKGE---IGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGK---RGPKGD 165
PG GP+G +GE G +GE G+ G GEKG G GP GP+G PG G GP G
Sbjct: 701 PGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGL 760
Query: 166 MGYPGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGL------------PGEPGLDGIPGR 213
G PG +GI G G +G +G +G G G G DG G G G PG
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820
Query: 214 NGMDGIPGKDGLPGKDGIPGTNGTNGEKGMTGPRGNRGKSGINGVPGTPA 263
G+ G PG G PG G NG G G GP+G G+ G+ G PG P
Sbjct: 821 RGLVGPPGSRGNPGSR---GENGPTGAVGFAGPQGPDGQPGVKGEPGEPG 867
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 88/219 (40%), Gaps = 72/219 (32%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKG--AP-GVVGPPGPQGIPGDEGKRGPKGDMGY 168
PGL+G G KG G KGE+G G +GE G P G +GP GP+G+PG+ G+ GP+G G
Sbjct: 296 PGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQ 355
Query: 169 PGPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPG---------------------- 206
G G+PG K GP G +G PG G G G+ GE G
Sbjct: 356 RGAHGMPG---KPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412
Query: 207 -----------LDGIPGRNGMDGIPGKD------------------------GLPGKDGI 231
DG PG G G PG G PG G+
Sbjct: 413 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 472
Query: 232 PGTNGTNGEKGMTGPR---------GNRGKSGINGVPGT 261
PG G G KG GP G GK G G PGT
Sbjct: 473 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT 511
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 24/142 (16%)
Query: 113 GLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPG---DEGKRGPKGDMGYP 169
G GP G G G++G G +GE G GA G GP GP G PG + G+ G KGD G P
Sbjct: 816 GEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSP 875
Query: 170 GPQGIPGDEGKRGPKGDMGYPGRIGLDGRDGLPGEPGLDGIPGRNG-------------- 215
GPQG+ G G GP G GL G G G PG G PG G
Sbjct: 876 GPQGLAGSPGPHGPN------GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA 929
Query: 216 -MDGIPGKDGLPGKDGIPGTNG 236
G PGK+G PG G PG++G
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHG 951
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 50/90 (55%)
Query: 112 PGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGP 171
PG G +G++G+ G G G+ G +G G PG VG PG G GD G RGP G G G
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGK 1117
Query: 172 QGIPGDEGKRGPKGDMGYPGRIGLDGRDGL 201
+G+PG +G RG KGD G G G G G
Sbjct: 1118 RGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 79/194 (40%), Gaps = 48/194 (24%)
Query: 112 PGLQGPIGQKGEI------------------------------------------GAKGE 129
PG GP+G +G G G
Sbjct: 212 PGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGR 271
Query: 130 MGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPGPQGIPGDEGKRGPKGDMGY 189
G GE G G+PG G PG G+PG +G RG KG G G G PG +G+ GP G MG
Sbjct: 272 NGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGA 331
Query: 190 PGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTNGEKGM 243
G +G G G G G G PG+ G G+PGK G+PG G PG G GE G
Sbjct: 332 MGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP 391
Query: 244 TGPRGNRGKSGING 257
TG RG G G G
Sbjct: 392 TGARGPEGPQGQRG 405
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 61/126 (48%), Gaps = 21/126 (16%)
Query: 111 PPGLQGPIGQKGEIGAKGEMGVKGERGEKGAPGVVGPPGPQGIPGDEGKRGPKGDMGYPG 170
PPG +G G +GE G G +G G +G G PGV G PG G GD G GP+G G PG
Sbjct: 826 PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPG 885
Query: 171 PQG---IPGDEGKRG---PKGDMGYPGRIG---------------LDGRDGLPGEPGLDG 209
P G +PG +G RG P G G+PG G G G G PGL G
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG 945
Query: 210 IPGRNG 215
PG +G
Sbjct: 946 DPGSHG 951
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.136 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 393,123,347
Number of Sequences: 539616
Number of extensions: 19996124
Number of successful extensions: 119783
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 667
Number of HSP's that attempted gapping in prelim test: 37476
Number of HSP's gapped (non-prelim): 20021
length of query: 902
length of database: 191,569,459
effective HSP length: 127
effective length of query: 775
effective length of database: 123,038,227
effective search space: 95354625925
effective search space used: 95354625925
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)